Your job contains 1 sequence.
>006220
MDELQVVEFVATYLKKKGFSEAENALQAEIQRNKSSNNTNPIDILNDPELSKFFRTFSES
EDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNF
REDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQST
KMLGIINERINFQVSPGQPSSISDDAEIVTLIGSNQDAANQINQKEVHWGLLEDSLENRL
EKTGLISDSEKAEGENKEAEIDENKKRPVEGGKQGASIKKLKKDKAINATAKTSRLEANT
VSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLSSAALPSVSFYTFINTHNGLNCASIS
QDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGH
SGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFAS
SSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECV
RIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCE
GSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQVLR
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006220
(656 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 2655 3.3e-276 1
UNIPROTKB|E1BEN8 - symbol:TAF5 "Uncharacterized protein" ... 835 5.7e-115 3
UNIPROTKB|E2RE41 - symbol:TAF5 "Uncharacterized protein" ... 838 9.3e-115 3
MGI|MGI:2442144 - symbol:Taf5 "TAF5 RNA polymerase II, TA... 837 1.5e-114 3
RGD|1311332 - symbol:Taf5 "TAF5 RNA polymerase II, TATA b... 835 1.9e-114 3
UNIPROTKB|Q15542 - symbol:TAF5 "Transcription initiation ... 835 3.1e-114 3
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 789 6.3e-110 2
UNIPROTKB|E1C4U3 - symbol:E1C4U3 "Uncharacterized protein... 1053 1.9e-106 1
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 1046 1.1e-105 1
POMBASE|SPCC5E4.03c - symbol:taf5 "SAGA complex subunit/T... 717 9.8e-97 2
FB|FBgn0010356 - symbol:Taf5 "TBP-associated factor 5" sp... 731 1.5e-91 2
DICTYBASE|DDB_G0287337 - symbol:taf5 "TFIID subunit" spec... 821 6.4e-87 2
UNIPROTKB|E2RR78 - symbol:TAF5L "Uncharacterized protein"... 713 1.9e-83 2
POMBASE|SPBC15D4.14 - symbol:taf73 "transcription factor ... 835 2.4e-83 1
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 823 4.5e-82 1
UNIPROTKB|F1N575 - symbol:TAF5L "Uncharacterized protein"... 692 4.0e-81 2
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 758 1.1e-78 2
UNIPROTKB|E1BHK9 - symbol:E1BHK9 "Uncharacterized protein... 640 1.6e-75 2
UNIPROTKB|O75529 - symbol:TAF5L "TAF5-like RNA polymerase... 713 2.1e-70 1
MGI|MGI:1919039 - symbol:Taf5l "TAF5-like RNA polymerase ... 713 2.1e-70 1
UNIPROTKB|F1RG42 - symbol:TAF5L "Uncharacterized protein"... 692 3.5e-68 1
ZFIN|ZDB-GENE-030131-5987 - symbol:taf5l "TAF5-like RNA p... 688 9.2e-68 1
ASPGD|ASPL0000054735 - symbol:AN0292 species:162425 "Emer... 686 1.5e-67 1
UNIPROTKB|E1C8E9 - symbol:TAF5L "Uncharacterized protein"... 684 2.4e-67 1
WB|WBGene00006386 - symbol:taf-5 species:6239 "Caenorhabd... 513 6.9e-59 2
FB|FBgn0011569 - symbol:can "cannonball" species:7227 "Dr... 497 6.2e-54 2
FB|FBgn0039067 - symbol:wda "will decrease acetylation" s... 406 1.0e-35 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 347 3.9e-33 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 402 6.0e-33 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 365 7.5e-33 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 355 9.3e-32 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 352 2.0e-31 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 338 6.6e-30 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 333 2.3e-29 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 331 3.9e-29 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 331 3.9e-29 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 329 6.4e-29 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 329 6.4e-29 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 328 8.2e-29 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 327 1.0e-28 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 327 1.0e-28 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 327 1.0e-28 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 327 1.0e-28 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 327 1.0e-28 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 305 1.7e-28 2
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 313 1.7e-28 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 325 1.7e-28 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 323 2.9e-28 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 309 3.3e-28 2
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 321 4.7e-28 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 341 7.2e-28 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 316 1.6e-27 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 316 1.6e-27 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 300 2.0e-27 2
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 315 2.1e-27 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 300 3.2e-27 2
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 300 3.2e-27 2
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 300 3.2e-27 2
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 300 3.2e-27 2
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 300 3.2e-27 2
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 300 3.2e-27 2
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 300 3.2e-27 2
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 313 3.5e-27 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 313 3.5e-27 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 313 3.5e-27 1
POMBASE|SPAC29E6.01 - symbol:pof11 "F-box protein Pof11" ... 329 3.8e-27 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 312 4.5e-27 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 300 5.1e-27 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 310 7.3e-27 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 299 1.2e-26 2
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 305 2.6e-26 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 299 3.0e-26 2
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 297 3.6e-26 2
UNIPROTKB|B3NQR5 - symbol:Ciao1 "Probable cytosolic iron-... 283 5.3e-26 2
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 317 6.1e-26 1
POMBASE|SPBC354.03 - symbol:swd3 "WD repeat protein Swd3"... 288 6.4e-26 2
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 318 6.5e-26 3
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 316 7.9e-26 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 300 8.9e-26 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 316 1.0e-25 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 315 1.1e-25 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 312 1.3e-25 1
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 298 1.5e-25 1
DICTYBASE|DDB_G0275045 - symbol:gpbB "Guanine nucleotide-... 298 1.5e-25 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 313 1.8e-25 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 297 1.9e-25 1
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 313 2.1e-25 1
ASPGD|ASPL0000002074 - symbol:rcoA species:162425 "Emeric... 312 2.2e-25 2
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 308 2.2e-25 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 312 2.5e-25 1
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 294 3.0e-25 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 295 3.1e-25 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 294 4.0e-25 1
POMBASE|SPAC6B12.15 - symbol:cpc2 "RACK1 ortholog Cpc2" s... 294 4.0e-25 1
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 320 4.9e-25 2
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 293 5.1e-25 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 293 5.1e-25 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 293 5.1e-25 1
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 309 6.4e-25 1
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 312 7.4e-25 1
WARNING: Descriptions of 1767 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 2655 (939.7 bits), Expect = 3.3e-276, P = 3.3e-276
Identities = 506/658 (76%), Positives = 569/658 (86%)
Query: 1 MDELQVVEFVATYLKKKGFSEAENALQAEIQRNKSSNNTNPIDILNDPELSKFFRTFSES 60
MD Q+ EFV YLKKKGFS A L++ +N + ++ +D NDPEL+K R+FS+
Sbjct: 1 MDPEQINEFVVGYLKKKGFSSAAKDLESYHHQNNNGSSFTSVDYHNDPELTKLIRSFSQQ 60
Query: 61 EDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNF 120
ED P RY++ YSKLRSW Y+SLDLYKHELL V+YPVFIHC+MDLV KGH QEAR FFN+F
Sbjct: 61 EDDPTRYREGYSKLRSWAYNSLDLYKHELLRVMYPVFIHCYMDLVGKGHTQEARAFFNSF 120
Query: 121 REDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQST 180
R+DHEM+HLRDLQKLEGVLSPSHLEEMEFA SLR SKVNIK CQYSYELLLQYLH T ST
Sbjct: 121 RKDHEMVHLRDLQKLEGVLSPSHLEEMEFARSLRKSKVNIKFCQYSYELLLQYLHSTVST 180
Query: 181 KMLGIINERINFQVSPGQPSSISDDAEIVTLIGSNQDAANQINQKEVHWGLLEDSLENRL 240
MLGIINE INFQV GQP+S SDD E VT++GS QD AN INQKE+ WGLLEDSLE+RL
Sbjct: 181 LMLGIINEHINFQVYSGQPTSSSDDIEAVTIVGSFQDTANHINQKEIQWGLLEDSLEDRL 240
Query: 241 EKTG-LISDSEKAEGENKEAEIDENKKRPVEGGKQGASIKKLKKDKAINATAKTSRLEAN 299
EKTG L+SDSEK +GE+K+ + D++KKR E GKQG+S+KKLKKDKA NATAK +RLE
Sbjct: 241 EKTGGLLSDSEKGQGESKDGDADDSKKRSTEIGKQGSSLKKLKKDKAGNATAKVARLETI 300
Query: 300 TVSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLSSAALPSVSFYTFINTHNGLNCASI 359
TVS APRVKP+LALPVM T+VEQSILEDLRNRV LSS A+PSVSFYTF+NTHNGLNC+SI
Sbjct: 301 TVSPAPRVKPELALPVMSTDVEQSILEDLRNRVQLSSVAMPSVSFYTFVNTHNGLNCSSI 360
Query: 360 SQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQG 419
S DGSLVAGGFSDSS+KVWDMAK+GQ A S LQ END++ + IGPNGR RSYTL G
Sbjct: 361 SHDGSLVAGGFSDSSIKVWDMAKIGQ-AGSGALQAENDSSDQS--IGPNGR-RSYTLLLG 416
Query: 420 HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFA 479
HSGPVYSA+FSP GDF+LSSSADTTIRLWSTKLNANLVCYKGHNYPVWD QF+P GHYFA
Sbjct: 417 HSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFA 476
Query: 480 SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGEC 539
S SHDRTARIWSMDRIQPLRIMAGHLSDVDCV+WH NCNYIATGSSDKTVRLWDV +GEC
Sbjct: 477 SCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGEC 536
Query: 540 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSC 599
VRIFIGHRSM+LSLAMSPDGRYMASGDEDGTIMMWDL++ RC+TPLMGH SCVW+L+YS
Sbjct: 537 VRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSG 596
Query: 600 EGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG-TNRLRSLKTLPTKSTPVYSLQVLR 656
EGSLLASGSADCTVKLWDVT+STK+ K EEK+G +NRLRSL+T PTKSTPV++L+ R
Sbjct: 597 EGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFPTKSTPVHALRFSR 654
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 835 (299.0 bits), Expect = 5.7e-115, Sum P(3) = 5.7e-115
Identities = 183/419 (43%), Positives = 247/419 (58%)
Query: 257 KEAEIDENKKRPVEGGKQGASIKKLKKDKAINATAKTSRLEANTVSTAPRVKPDLALPVM 316
KE EI+ E G+ K KK K + +K+ + + N AP P +P +
Sbjct: 378 KEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPN----AP---PQNRIP-L 429
Query: 317 PTEVEQSILEDLRN------RVHLSSAALPSVSFYTFINTHNGLNCASISQDGSLVAGGF 370
P + L+ + N RV L LPS+ FYTF+N + GL ++ D SL+AGGF
Sbjct: 430 PELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGF 489
Query: 371 SDSSLKVWDMA--KLG--QQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYS 426
+DS+++VW + KL +QA L + E I+ LY GHSGPVY
Sbjct: 490 ADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILY-GHSGPVYG 548
Query: 427 ASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRT 486
ASFSP +++LSSS D T+RLWS + LV YKGHNYPVWD QF+P G+YF S HDR
Sbjct: 549 ASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRV 608
Query: 487 ARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGH 546
AR+W+ D QPLRI AGHL+DV+C R+H N NY+ATGS+D+TVRLWDV +G CVRIF GH
Sbjct: 609 ARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGH 668
Query: 547 RSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLAS 606
+ I SL SP+GR++A+G DG +++WD+ G V L GHT V +L +S +G +LAS
Sbjct: 669 KGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILAS 728
Query: 607 GSADCTVKLWDVTTSTKVLKTEE-KSGTNRLRS--------LKTLPTKSTPVYSLQVLR 656
GS D TV+LWD + + ++T++ + T + L T TKSTPV L R
Sbjct: 729 GSMDNTVRLWDAVKAFEDVETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLHFTR 787
Score = 294 (108.6 bits), Expect = 5.7e-115, Sum P(3) = 5.7e-115
Identities = 74/244 (30%), Positives = 127/244 (52%)
Query: 42 IDILNDPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCF 101
+ + + P++S +S+ D P Y++ YS L+ + SLD ++ EL + YP+F+H +
Sbjct: 190 VSVEDQPDVSAVLSAYSQQGD-PTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMY 248
Query: 102 MDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIK 161
++LV H EA++FF F D E + DL+ L + H++ E R SK ++
Sbjct: 249 LELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLR 308
Query: 162 ICQYSYELLLQYLHKTQSTKMLGIINERINFQVSPGQPSSISD-DAEIVTLIGSNQDAAN 220
I + SY+LL ++L + Q+ ++ I+ E + + G P S DA + +L G +A
Sbjct: 309 ISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAG---EAKR 365
Query: 221 QINQKEVHWGLLEDSLENRLEKTGLISDSEKAEGENKEAEIDENKKRPVEGGKQGASIKK 280
+ N+ +V +GLL+ E +E + D E EGEN+E + KK+P K K
Sbjct: 366 EANKSKVFFGLLK---EPEIE---VPLDDEDEEGENEEGK--PKKKKPK---KDSIGSKS 414
Query: 281 LKKD 284
K+D
Sbjct: 415 KKQD 418
Score = 39 (18.8 bits), Expect = 5.7e-115, Sum P(3) = 5.7e-115
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 5 QVVEFVATYLKKKGFSEAENALQAE 29
Q + V +L++ EAE AL+ E
Sbjct: 95 QTLLAVLQFLRQSNLREAEEALRRE 119
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 838 (300.0 bits), Expect = 9.3e-115, Sum P(3) = 9.3e-115
Identities = 184/419 (43%), Positives = 247/419 (58%)
Query: 257 KEAEIDENKKRPVEGGKQGASIKKLKKDKAINATAKTSRLEANTVSTAPRVKPDLALPVM 316
KE EI+ E G+ K KK K + +K+ + + N AP P +P +
Sbjct: 379 KEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPN----AP---PQNRIP-L 430
Query: 317 PTEVEQSILEDLRN------RVHLSSAALPSVSFYTFINTHNGLNCASISQDGSLVAGGF 370
P + L+ + N RV L LPS+ FYTF+N + GL ++ D SL+AGGF
Sbjct: 431 PELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGF 490
Query: 371 SDSSLKVWDMA--KLG--QQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYS 426
+DS+++VW + KL +QA L + E I+ LY GHSGPVY
Sbjct: 491 ADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILY-GHSGPVYG 549
Query: 427 ASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRT 486
ASFSP +++LSSS D T+RLWS + LV YKGHNYPVWD QF+P G+YF S HDR
Sbjct: 550 ASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRV 609
Query: 487 ARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGH 546
AR+W+ D QPLRI AGHL+DV+C R+H N NY+ATGS+D+TVRLWDV +G CVRIF GH
Sbjct: 610 ARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGH 669
Query: 547 RSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLAS 606
+ I SL SP+GR++A+G DG +++WD+ G V L GHT V +L +S +G +LAS
Sbjct: 670 KGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILAS 729
Query: 607 GSADCTVKLWDVTTSTKVLKTEE-KSGTNRLRS--------LKTLPTKSTPVYSLQVLR 656
GS D TV+LWD + + L+T++ + T + L T TKSTPV L R
Sbjct: 730 GSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLHFTR 788
Score = 289 (106.8 bits), Expect = 9.3e-115, Sum P(3) = 9.3e-115
Identities = 73/244 (29%), Positives = 127/244 (52%)
Query: 42 IDILNDPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCF 101
+ + + P++S +++ D P Y++ YS L+ + SLD ++ EL + YP+F+H +
Sbjct: 191 VAVEDQPDVSAVLSAYNQQGD-PTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMY 249
Query: 102 MDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIK 161
++LV H EA++FF F D E + DL+ L + H++ E R SK ++
Sbjct: 250 LELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLR 309
Query: 162 ICQYSYELLLQYLHKTQSTKMLGIINERINFQVSPGQPSSISD-DAEIVTLIGSNQDAAN 220
I + SY+LL ++L + Q+ ++ I+ E + + G P S DA + +L G +A
Sbjct: 310 ISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAG---EAKR 366
Query: 221 QINQKEVHWGLLEDSLENRLEKTGLISDSEKAEGENKEAEIDENKKRPVEGGKQGASIKK 280
+ N+ +V +GLL+ E +E + D E EGEN+E + KK+P K K
Sbjct: 367 EANKSKVFFGLLK---EPEIE---VPLDDEDEEGENEEGK--PKKKKPK---KDSIGSKS 415
Query: 281 LKKD 284
K+D
Sbjct: 416 KKQD 419
Score = 39 (18.8 bits), Expect = 9.3e-115, Sum P(3) = 9.3e-115
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 5 QVVEFVATYLKKKGFSEAENALQAE 29
Q + V +L++ EAE AL+ E
Sbjct: 96 QTLLAVLQFLRQSNLREAEEALRRE 120
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 837 (299.7 bits), Expect = 1.5e-114, Sum P(3) = 1.5e-114
Identities = 184/419 (43%), Positives = 247/419 (58%)
Query: 257 KEAEIDENKKRPVEGGKQGASIKKLKKDKAINATAKTSRLEANTVSTAPRVKPDLALPVM 316
KE EI+ E G+ K KK K + +K+ + + N AP P +P +
Sbjct: 379 KEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPN----AP---PQNRIP-L 430
Query: 317 PTEVEQSILEDLRN------RVHLSSAALPSVSFYTFINTHNGLNCASISQDGSLVAGGF 370
P + L+ + N RV L LPS+ FYTF+N + GL ++ D SL+AGGF
Sbjct: 431 PELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGF 490
Query: 371 SDSSLKVWDMA--KLG--QQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYS 426
+DS+++VW + KL +QA L + E I+ LY GHSGPVY
Sbjct: 491 ADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILY-GHSGPVYG 549
Query: 427 ASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRT 486
ASFSP +++LSSS D T+RLWS + LV YKGHNYPVWD QF+P G+YF S HDR
Sbjct: 550 ASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRV 609
Query: 487 ARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGH 546
AR+W+ D QPLRI AGHL+DV+C R+H N NY+ATGS+D+TVRLWDV +G CVRIF GH
Sbjct: 610 ARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGH 669
Query: 547 RSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLAS 606
+ I SL SP+GR++A+G DG +++WD+ G V L GHT V +L +S +G +LAS
Sbjct: 670 KGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILAS 729
Query: 607 GSADCTVKLWDVTTSTKVLKTEE-KSGTNRLRS--------LKTLPTKSTPVYSLQVLR 656
GS D TV+LWD + + L+T++ + T + L T TKSTPV L R
Sbjct: 730 GSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLHFTR 788
Score = 288 (106.4 bits), Expect = 1.5e-114, Sum P(3) = 1.5e-114
Identities = 73/244 (29%), Positives = 127/244 (52%)
Query: 42 IDILNDPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCF 101
+ + + P++S +++ D P Y++ YS L+ + SLD ++ EL + YP+F+H +
Sbjct: 191 VAVEDQPDVSAVLSAYNQQGD-PTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMY 249
Query: 102 MDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIK 161
++LV H EA++FF F D E + DL+ L + H++ E R SK ++
Sbjct: 250 LELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLR 309
Query: 162 ICQYSYELLLQYLHKTQSTKMLGIINERINFQVSPGQPSSISD-DAEIVTLIGSNQDAAN 220
I + SY+LL ++L + Q+ ++ I+ E + + G P S DA + +L G +A
Sbjct: 310 IYRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAG---EAKR 366
Query: 221 QINQKEVHWGLLEDSLENRLEKTGLISDSEKAEGENKEAEIDENKKRPVEGGKQGASIKK 280
+ N+ +V +GLL+ E +E + D E EGEN+E + KK+P K K
Sbjct: 367 EANKSKVFFGLLK---EPEIE---VPLDDEDEEGENEEGK--PKKKKPK---KDSIGSKS 415
Query: 281 LKKD 284
K+D
Sbjct: 416 KKQD 419
Score = 39 (18.8 bits), Expect = 1.5e-114, Sum P(3) = 1.5e-114
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 5 QVVEFVATYLKKKGFSEAENALQAE 29
Q + V +L++ EAE AL+ E
Sbjct: 96 QTLLAVLQFLRQSNLREAEEALRRE 120
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 835 (299.0 bits), Expect = 1.9e-114, Sum P(3) = 1.9e-114
Identities = 184/419 (43%), Positives = 247/419 (58%)
Query: 257 KEAEIDENKKRPVEGGKQGASIKKLKKDKAINATAKTSRLEANTVSTAPRVKPDLALPVM 316
KE EI+ E G+ K KK K + +K+ + + N AP P +P +
Sbjct: 376 KEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPN----AP---PQNRIP-L 427
Query: 317 PTEVEQSILEDLRN------RVHLSSAALPSVSFYTFINTHNGLNCASISQDGSLVAGGF 370
P + L+ + N RV L LPS+ FYTF+N + GL ++ D SL+AGGF
Sbjct: 428 PELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGF 487
Query: 371 SDSSLKVWDMA--KLG--QQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYS 426
+DS+++VW + KL +QA L + E I+ LY GHSGPVY
Sbjct: 488 ADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILY-GHSGPVYG 546
Query: 427 ASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRT 486
ASFSP +++LSSS D T+RLWS + LV YKGHNYPVWD QF+P G+YF S HDR
Sbjct: 547 ASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRV 606
Query: 487 ARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGH 546
AR+W+ D QPLRI AGHL+DV+C R+H N NY+ATGS+D+TVRLWDV +G CVRIF GH
Sbjct: 607 ARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGH 666
Query: 547 RSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLAS 606
+ I SL SP+GR++A+G DG +++WD+ G V L GHT V +L +S +G +LAS
Sbjct: 667 KGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILAS 726
Query: 607 GSADCTVKLWDVTTSTKVLKTEE-KSGTNRLRS--------LKTLPTKSTPVYSLQVLR 656
GS D TV+LWD + + L+T++ + T + L T TKSTPV L R
Sbjct: 727 GSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLHFTR 785
Score = 289 (106.8 bits), Expect = 1.9e-114, Sum P(3) = 1.9e-114
Identities = 73/244 (29%), Positives = 127/244 (52%)
Query: 42 IDILNDPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCF 101
+ + + P++S +++ D P Y++ YS L+ + SLD ++ EL + YP+F+H +
Sbjct: 188 VAVEDQPDVSAVLSAYNQQGD-PTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMY 246
Query: 102 MDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIK 161
++LV H EA++FF F D E + DL+ L + H++ E R SK ++
Sbjct: 247 LELVYNQHESEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLR 306
Query: 162 ICQYSYELLLQYLHKTQSTKMLGIINERINFQVSPGQPSSISD-DAEIVTLIGSNQDAAN 220
I + SY+LL ++L + Q+ ++ I+ E + + G P S DA + +L G +A
Sbjct: 307 ISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAG---EAKR 363
Query: 221 QINQKEVHWGLLEDSLENRLEKTGLISDSEKAEGENKEAEIDENKKRPVEGGKQGASIKK 280
+ N+ +V +GLL+ E +E + D E EGEN+E + KK+P K K
Sbjct: 364 EANKSKVFFGLLK---EPEIE---VPLDDEDEEGENEEGK--PKKKKPK---KDSIGSKS 412
Query: 281 LKKD 284
K+D
Sbjct: 413 KKQD 416
Score = 39 (18.8 bits), Expect = 1.9e-114, Sum P(3) = 1.9e-114
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 5 QVVEFVATYLKKKGFSEAENALQAE 29
Q + V +L++ EAE AL+ E
Sbjct: 93 QTLLAVLQFLRQSNLREAEEALRRE 117
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 835 (299.0 bits), Expect = 3.1e-114, Sum P(3) = 3.1e-114
Identities = 184/419 (43%), Positives = 247/419 (58%)
Query: 257 KEAEIDENKKRPVEGGKQGASIKKLKKDKAINATAKTSRLEANTVSTAPRVKPDLALPVM 316
KE EI+ E G+ K KK K + +K+ + + N AP P +P +
Sbjct: 378 KEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPN----AP---PQNRIP-L 429
Query: 317 PTEVEQSILEDLRN------RVHLSSAALPSVSFYTFINTHNGLNCASISQDGSLVAGGF 370
P + L+ + N RV L LPS+ FYTF+N + GL ++ D SL+AGGF
Sbjct: 430 PELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGF 489
Query: 371 SDSSLKVWDMA--KLG--QQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYS 426
+DS+++VW + KL +QA L + E I+ LY GHSGPVY
Sbjct: 490 ADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILY-GHSGPVYG 548
Query: 427 ASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRT 486
ASFSP +++LSSS D T+RLWS + LV YKGHNYPVWD QF+P G+YF S HDR
Sbjct: 549 ASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRV 608
Query: 487 ARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGH 546
AR+W+ D QPLRI AGHL+DV+C R+H N NY+ATGS+D+TVRLWDV +G CVRIF GH
Sbjct: 609 ARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGH 668
Query: 547 RSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLAS 606
+ I SL SP+GR++A+G DG +++WD+ G V L GHT V +L +S +G +LAS
Sbjct: 669 KGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILAS 728
Query: 607 GSADCTVKLWDVTTSTKVLKTEE-KSGTNRLRS--------LKTLPTKSTPVYSLQVLR 656
GS D TV+LWD + + L+T++ + T + L T TKSTPV L R
Sbjct: 729 GSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLHFTR 787
Score = 289 (106.8 bits), Expect = 3.1e-114, Sum P(3) = 3.1e-114
Identities = 73/244 (29%), Positives = 127/244 (52%)
Query: 42 IDILNDPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCF 101
+ + + P++S +++ D P Y++ YS L+ + SLD ++ EL + YP+F+H +
Sbjct: 190 VAVEDQPDVSAVLSAYNQQGD-PTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMY 248
Query: 102 MDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIK 161
++LV H EA++FF F D E + DL+ L + H++ E R SK ++
Sbjct: 249 LELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLR 308
Query: 162 ICQYSYELLLQYLHKTQSTKMLGIINERINFQVSPGQPSSISD-DAEIVTLIGSNQDAAN 220
I + SY+LL ++L + Q+ ++ I+ E + + G P S DA + +L G +A
Sbjct: 309 ISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAG---EAKR 365
Query: 221 QINQKEVHWGLLEDSLENRLEKTGLISDSEKAEGENKEAEIDENKKRPVEGGKQGASIKK 280
+ N+ +V +GLL+ E +E + D E EGEN+E + KK+P K K
Sbjct: 366 EANKSKVFFGLLK---EPEIE---VPLDDEDEEGENEEGK--PKKKKPK---KDSIGSKS 414
Query: 281 LKKD 284
K+D
Sbjct: 415 KKQD 418
Score = 37 (18.1 bits), Expect = 3.1e-114, Sum P(3) = 3.1e-114
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 5 QVVEFVATYLKKKGFSEAENALQAE 29
Q + V +L++ EAE AL+ E
Sbjct: 95 QTLLAVLQFLRQSKLREAEEALRRE 119
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 789 (282.8 bits), Expect = 6.3e-110, Sum P(2) = 6.3e-110
Identities = 166/387 (42%), Positives = 241/387 (62%)
Query: 266 KRPVEG--GKQGASIKKLKKDKAINATAKTSRLEANTVSTAPR---VKPDLALPVMPT-E 319
K P++ K+ + K+K +K KT E ++ + V+ L LP+ +
Sbjct: 366 KLPIDPDVAKEVEAELKIKDEKIEPVNNKTLTKEFQDMTKPDQDSPVRESLPLPLKDAND 425
Query: 320 VEQSIL--EDLRNRVHLSS--AALPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSL 375
+++ I+ ED R+++ L + A+LPSV YTF NT+N + C + D +LVA GF DS +
Sbjct: 426 IKKMIIQVEDSRSKIKLGAIQASLPSVCMYTFHNTNNNMTCIEFNDDSTLVAAGFQDSYI 485
Query: 376 KVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDF 435
K+W L + + S L+ + P+E N RK GHSGPVY SFSP +
Sbjct: 486 KLWS---LDGKPLKSVLKRDRHK-PQE-----NTRKLI-----GHSGPVYGVSFSPDNKY 531
Query: 436 ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRI 495
+LS S D T+RLWS LV YKGH PVWDV+F+P GHYF ++SHD+TAR+W+ D I
Sbjct: 532 LLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHI 591
Query: 496 QPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAM 555
PLRI AGH++DVDCV +H N NY+ TGSSDKT R+WDV +G CVR+F+GH + + LA+
Sbjct: 592 YPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAV 651
Query: 556 SPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT-SCVWTLAYSCEGSLLASGSADCTVK 614
SPDGR++ASG EDG I +WD+ SGR + + GH + +++LA+S +G++L SG AD +V+
Sbjct: 652 SPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVR 711
Query: 615 LWDVTTSTKVLKTEEKSGTNRLRSLKT 641
+WDV +T E ++ N + +T
Sbjct: 712 VWDVKKNTNDAGPEPEAFNNNVNGNET 738
Score = 317 (116.6 bits), Expect = 6.3e-110, Sum P(2) = 6.3e-110
Identities = 83/263 (31%), Positives = 137/263 (52%)
Query: 14 LKKKGFSEAENAL------QAEIQRNKSSNNTNPIDILNDPELS--KFFRTFSESEDGPA 65
LK+K ++AE L Q++I++ + I + EL K ++ E P
Sbjct: 134 LKEK-LTKAEQELKELRDKQSKIEKELREAKDREVKISKEKELKQLKELEKKTKRESDPE 192
Query: 66 RYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHE 125
Y YS LR W SSLDLYK EL VLYP++IHCF++L++KG EA+ FF+ FR DH
Sbjct: 193 IYFTAYSMLRRWVGSSLDLYKPELSRVLYPLYIHCFLELISKGFSSEAKLFFDKFRSDHL 252
Query: 126 MMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQSTK---M 182
++H +++K G+ P HLEE + A + R K I + + S LL+ +LH+ ++ +
Sbjct: 253 VLHGIEVEKFAGLSLPEHLEENDLAVAYRKYKYRILVSKTSLNLLIYFLHENEAVGGGIL 312
Query: 183 LGIINERINFQVSPGQPSSISDDAEI-----VTLIGSNQDAANQINQKEVHWGLL--EDS 235
+ IIN+ ++ +S +P I + E ++ ++ + + N++ V G L +
Sbjct: 313 IRIINQYLDPVISTNRPDKIDQEGEANPEEGISEYVTDTNEVKKFNEQNVKLGKLPIDPD 372
Query: 236 LENRLEKTGLISDSEKAEGENKE 258
+ +E I D EK E N +
Sbjct: 373 VAKEVEAELKIKD-EKIEPVNNK 394
Score = 286 (105.7 bits), Expect = 3.8e-50, Sum P(2) = 3.8e-50
Identities = 72/241 (29%), Positives = 117/241 (48%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
Y+GH+ PV+ FSPLG + +++S D T RLW+T L + GH V V+F+P +
Sbjct: 555 YKGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSN 614
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
Y + S D+T R+W + +R+ GH + V+C+ + ++A+G D + +WD+ S
Sbjct: 615 YVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGS 674
Query: 537 GECVRIFIGH-RSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTL 595
G ++ GH R+ + SLA S DG + SG D ++ +WD+ T G +
Sbjct: 675 GRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDVKKN---TNDAGPEPEAFN- 730
Query: 596 AYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQVL 655
+ G+ S T + + K E T+ + TK TPVY +Q
Sbjct: 731 -NNVNGNETNSDGTSSTQQQQQPQQQQQSKK--ESIATSD--HMNAFFTKKTPVYKVQFT 785
Query: 656 R 656
R
Sbjct: 786 R 786
Score = 43 (20.2 bits), Expect = 5.1e-81, Sum P(2) = 5.1e-81
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 10 VATYLKKKGFSEAENALQAEIQRNKSSNNTNPIDILNDP 48
V YL KKG+ E L+ E SSN P L P
Sbjct: 84 VLEYLNKKGYHRTEAQLRLE-----SSNIPTPAVPLATP 117
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
Identities = 237/626 (37%), Positives = 353/626 (56%)
Query: 46 NDPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLV 105
+ P++S +++ D P Y++ YS L+++ SLD ++ EL + YP+F+H +++LV
Sbjct: 174 DQPDVSAVLSAYNQQGD-PTLYEEYYSGLKNFIECSLDCHRAELSQLFYPLFVHMYLELV 232
Query: 106 AKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQY 165
H EA++FF F D E + DL+ L + H++ E R SK ++I +
Sbjct: 233 YNQHESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRD 292
Query: 166 SYELLLQYLHKTQSTKMLGIINERINFQVSPGQPSSISD-DAEIVTLIGSNQDAANQINQ 224
SY+LL ++L + Q+ ++ I+ E + + G P S DA + +L G +A + N+
Sbjct: 293 SYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAG---EAKREANK 349
Query: 225 KEVHWGLLEDSLENRLEKTGLISDSEKAEGENKEAEIDENKKRPVEGGKQGASIKKLKKD 284
+V +GLL++ + + D E EGEN+E + KK+ + G+ KK +D
Sbjct: 350 AKVFFGLLKEP------EFDVPLDDEDEEGENEEGK---PKKKKAKRDSVGSKSKK--QD 398
Query: 285 KAINATAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLSSAALPSVSF 344
NA + N + P +K L + +++ RV L LPS+ F
Sbjct: 399 P--NAPPQ------NRIPL-PELKDSDKLDKVMN------MKEAARRVRLGPECLPSICF 443
Query: 345 YTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSG-----LQGENDTT 399
YTF+N + GL I+ D S++ GGF+DS+++VW + ++V + + E+D
Sbjct: 444 YTFLNAYQGLTAVDITDDSSMIVGGFADSTVRVWSVTPKKLRSVKAAADLSLIDKESDDV 503
Query: 400 PREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
E I+ LY GHSGPVY SFSP +++LS S D T+RLWS + LV Y
Sbjct: 504 -LERIMDEKTASELKILY-GHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGY 561
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
KGHNYPVWD QF+P G+YF S HDR AR+W+ D QPLRI AGHL+DV C R+H N NY
Sbjct: 562 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNY 621
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
IATGS+D+TVRLWDV +G CVRIF GH+ I SLA SP+GR++A+G DG +++WD+ G
Sbjct: 622 IATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHG 681
Query: 580 RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEE-KSGTNRLRS 638
V L GHT ++ L +S +G +LASGS D TV+LWD + + L+T++ + T +
Sbjct: 682 LMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINL 741
Query: 639 --------LKTLPTKSTPVYSLQVLR 656
L T TKSTPV L R
Sbjct: 742 PENSQDLLLGTYMTKSTPVVHLHFTR 767
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 1046 (373.3 bits), Expect = 1.1e-105, P = 1.1e-105
Identities = 230/590 (38%), Positives = 342/590 (57%)
Query: 46 NDPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLV 105
+ P++S +S+ D P+ Y+ YS L+ + S LD ++ EL + YP+F+H +++LV
Sbjct: 150 DQPDVSVVLSAYSQQGD-PSLYKVYYSDLKKFIESVLDCHRAELSQLFYPLFVHMYLELV 208
Query: 106 AKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQY 165
H EA+ FF+ F D E + DL+ L G+ H++ E R S+ ++I +
Sbjct: 209 YNNHESEAKAFFDKFSGDQECYYEDDLRVLCGLTKKEHMKGNEALLDFRTSRFVLRISRD 268
Query: 166 SYELLLQYLHKTQSTKMLGIINERINFQVSPGQPSSISD-DAEIVTLIGSNQDAANQINQ 224
SY+LL ++L + Q+ ++ II E + + G P S S D+ +L G +A ++N+
Sbjct: 269 SYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKSQIDSMSGSLAG---EARREVNK 325
Query: 225 KEVHWGLLEDSLENRLEKTGLISDSEKAEGENKEAEIDENKKRPVEGGKQGASIKKLKKD 284
+V +GLL+ E +E + D E E EN+E + KK+ + G+ KK +D
Sbjct: 326 VKVFYGLLK---EPEIE---VPLDDEDEEAENEEGK---PKKKKTKKDSMGSKSKK--QD 374
Query: 285 KAINATAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLSSAALPSVSF 344
NA + N + P +K L + +++ R+ L LPS+ F
Sbjct: 375 P--NAP------QQNRIPL-PELKDSDKLDKI------MYMKESTKRIRLGPETLPSICF 419
Query: 345 YTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSG-----LQGENDTT 399
YTF+N + GL + D SL+AGGF+DS+++VW + + V S + E+D
Sbjct: 420 YTFLNAYQGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDV 479
Query: 400 PREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
E I+ S L+ GHSGPVY SFSP +++LSSS D TIRLWS + LV Y
Sbjct: 480 -LERIMDEKTSSESKILH-GHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGY 537
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
KGHNYPVWD QF+P G+YF S HDR AR+W+ D QPLRI AGHL+DV C R+H N NY
Sbjct: 538 KGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNY 597
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
+ATGSSD+TVRLWDV +G CVRIF GH+ I SLA SP+G+++ASG DG +++WD+ G
Sbjct: 598 VATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHG 657
Query: 580 RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEE 629
+ L GHT ++ L +S +G ++ASGS D TV+LWDV + ++T++
Sbjct: 658 LMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDVMRAIDDVETDD 707
Score = 300 (110.7 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 65/200 (32%), Positives = 98/200 (49%)
Query: 434 DFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMD 493
+ I S D R+ K ++ GH+ PV+ V F+P +Y SSS D T R+WS+
Sbjct: 470 NLIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQ 529
Query: 494 RIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSL 553
L GH V ++ Y +G D+ RLW + +RIF GH + +
Sbjct: 530 TFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCT 589
Query: 554 AMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTV 613
P+ Y+A+G D T+ +WD+ +G CV GH + +LA+S G LASGS D V
Sbjct: 590 RFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRV 649
Query: 614 KLWDVTTSTKVLKTEEKSGT 633
LWD+ + + + +GT
Sbjct: 650 LLWDIGHGLMIAELKGHTGT 669
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 717 (257.5 bits), Expect = 9.8e-97, Sum P(2) = 9.8e-97
Identities = 141/302 (46%), Positives = 195/302 (64%)
Query: 318 TEVEQSILEDLRNRVHLSS-AALPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLK 376
+EVE ++D R+HL A+LPSV YTF +T+N +NCA S D +++A GF +S ++
Sbjct: 292 SEVEA--VKDWSKRLHLGPRASLPSVCMYTFHHTNNNMNCAEFSPDSTMIACGFQESYIR 349
Query: 377 VWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFI 436
+W + K ++++ +T ED G S L HSGPVY +FSP ++
Sbjct: 350 LWSI-KADKKSLPK-------STSVEDSDG------SVRLLS-HSGPVYGTTFSPDNKYL 394
Query: 437 LSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQ 496
LS S D + RLWS LV YKGH PVWDV F P GHYFA++SHD+TA++WS D I
Sbjct: 395 LSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIY 454
Query: 497 PLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMS 556
PLR+ AGHLSDVDCV +H N Y+ TGSSDKT RLWDV G VR+F GH + ++A++
Sbjct: 455 PLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIA 514
Query: 557 PDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
PDG MAS D +G I +WD+ +GR + + GH +++L++S E ++L SG +DCTV+ W
Sbjct: 515 PDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAW 574
Query: 617 DV 618
DV
Sbjct: 575 DV 576
Score = 277 (102.6 bits), Expect = 1.0e-43, Sum P(2) = 1.0e-43
Identities = 72/238 (30%), Positives = 108/238 (45%)
Query: 405 IGPNGRKRSYTLYQGH--SGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANL------ 456
+GP S +Y H + + A FSP I ++ IRLWS K +
Sbjct: 306 LGPRASLPSVCMYTFHHTNNNMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTS 365
Query: 457 -------VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVD 509
V H+ PV+ F+P Y S S D +AR+WS+D L GH V
Sbjct: 366 VEDSDGSVRLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVW 425
Query: 510 CVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDG 569
V + +Y AT S D+T +LW +R+F GH S + + P+ Y+ +G D
Sbjct: 426 DVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDK 485
Query: 570 TIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
T +WD+ G V GHT V +A + +G +AS ++ + LWD+ T ++ KT
Sbjct: 486 TCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRI-KT 542
Score = 264 (98.0 bits), Expect = 9.8e-97, Sum P(2) = 9.8e-97
Identities = 59/203 (29%), Positives = 112/203 (55%)
Query: 10 VATYLKKKGFSEAENALQAEIQRNKSSNNTNPIDILNDPELSKFFRTFSESEDGPARYQD 69
V YL KKG+S E L+ E + S + + ++ E+ D Y
Sbjct: 16 VLDYLAKKGYSRTEAMLRLEASGSGVS-------------VEEKLKSIEETPDA---YTH 59
Query: 70 EYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHL 129
Y+ LR W SSL+LYK EL +L+P+F+H +++L+++ H + A+ F+ F++DH +H
Sbjct: 60 TYTILRDWVDSSLELYKAELHRILFPIFVHSYLNLLSQDHYEAAKQFYELFKDDHTDLHD 119
Query: 130 RDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQSTK---MLGII 186
D++ L+ + PSH+ E A R +K + + +++LLL +L + S ++ +I
Sbjct: 120 FDVKNLKSLSLPSHVAEDRTAQQYRQNKYQLHFSRITFDLLLHFLFENVSNGGSIIIKLI 179
Query: 187 NERINFQVSPGQPSSISDDAEIV 209
N+ I+ + PG+P+ + ++A+++
Sbjct: 180 NQHIDIHIVPGRPT-VLENAKVI 201
Score = 80 (33.2 bits), Expect = 5.8e-23, Sum P(2) = 5.8e-23
Identities = 26/108 (24%), Positives = 48/108 (44%)
Query: 539 CVRIFIGHRSMILSLA-MSPDGRYMASGDEDGTIMMWDLASGRCVTP------------- 584
C+ F H + ++ A SPD +A G ++ I +W + + + P
Sbjct: 316 CMYTF-HHTNNNMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVR 374
Query: 585 LMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
L+ H+ V+ +S + L S S D + +LW V T T ++ + +G
Sbjct: 375 LLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTG 422
Score = 65 (27.9 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 351 HNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLG-QQAVSSGLQGENDTTP 400
H G + S S++ +++ G SD +++ WD+ K VSS L G + TP
Sbjct: 546 HRGNIYSLSFSRESTVLVSGGSDCTVRAWDVFKTNYNNPVSSSLTG-SVVTP 596
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 731 (262.4 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 159/388 (40%), Positives = 233/388 (60%)
Query: 279 KKLKKDKAINATAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLSSAA 338
KK KKD ++ K S+ + N S R+ P L ++ L + R+ LS
Sbjct: 310 KKPKKDPLLS---KKSKSDPNAPSI-DRI-PLPELKDSDKLLKLKALREASKRLALSKDQ 364
Query: 339 LPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDM--AKLGQQAVSSGLQGEN 396
LPS FYT +N+H G+ CA IS D +++A GF DSS+++W + AKL + L+ +
Sbjct: 365 LPSAVFYTVLNSHQGVTCAEISDDSTMLACGFGDSSVRIWSLTPAKLRTLKDADSLRELD 424
Query: 397 DTTPREDIIGPNGRKRSYTL-YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNAN 455
+ ++ + R T GH+GPVY +F+P + +LS S D+TIRLWS +
Sbjct: 425 KESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSC 484
Query: 456 LVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHI 515
+V Y+GH YPVWDV+F P G+YF S S+D+TAR+W+ D Q LR+ GHLSDVDCV++H
Sbjct: 485 VVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHP 544
Query: 516 NCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWD 575
N NY+ATGSSD+TVRLWD +G+ VR+ GH+ + SLA S GRY+ASG D I++WD
Sbjct: 545 NSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWD 604
Query: 576 LASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD---VTT---STKVLKTEE 629
L++G VT L+ HTS V T+ +S +G++LA+ D + LWD VT S + +
Sbjct: 605 LSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDFHKVTEDYISNHITVSHH 664
Query: 630 KSGTNR-LRSLKTLPTKSTPVYSLQVLR 656
+ + + ++T P+K++P SL R
Sbjct: 665 QDENDEDVYLMRTFPSKNSPFVSLHFTR 692
Score = 201 (75.8 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 61/237 (25%), Positives = 116/237 (48%)
Query: 49 ELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKG 108
EL+KF +S D Y+ Y +LR++ SLD+YKHEL VLYP+ + + ++A G
Sbjct: 101 ELAKFID--DDSFDAQ-HYEQAYKELRTFVEDSLDIYKHELSMVLYPILVQIYFKILASG 157
Query: 109 HIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYE 168
++A+ F ++ D + ++ L L + P L E + ++ K I++ + S+
Sbjct: 158 LREKAKEFIEKYKCDLDGYYIEGLFNLLLLSKPEELLENDLVVAMEQDKFVIRMSRDSHS 217
Query: 169 LLLQYLHKTQSTKMLGIINERINFQVSPGQPSSISDDAEIVTLIGSNQ-DAANQINQKEV 227
L +++ + + I+++ ++F G + + V GS+ +A Q N+ V
Sbjct: 218 LFKRHIQDRRQEVVADIVSKYLHFDTYEGMARN---KLQCVATAGSHLGEAKRQDNKMRV 274
Query: 228 HWGLLEDSLENRLEKTGLISDSEKAEGENKEAEIDENKKRPVEGGKQGASIKKLKKD 284
++GLL++ ++ + T + E E ++ +A KK+P K KK K D
Sbjct: 275 YYGLLKE-VDFQTLTTPAPAPEE--EDDDPDAPDRPKKKKPK---KDPLLSKKSKSD 325
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 821 (294.1 bits), Expect = 6.4e-87, Sum P(2) = 6.4e-87
Identities = 198/619 (31%), Positives = 325/619 (52%)
Query: 33 NKSSNNT--NPIDILNDPELSKFFRTFSESEDG----PARYQDEYSKLRSWTYSSLDLYK 86
N+++ NT + + +D EL+++ ++ S G P Y ++Y KL +W +SSLD+YK
Sbjct: 240 NQTNINTVTDNLGSSDDQELAQYLHMYNSSNKGDTSNPQNYLEQYKKLGNWIHSSLDIYK 299
Query: 87 HELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEE 146
+ELL +LYPVF+H ++DL+ KG+ Q+AR DHE DL+ L G+ + HL+E
Sbjct: 300 NELLSILYPVFVHSYIDLITKGYPQQARELMEKIGPDHEEYFGDDLKLLRGISNTDHLKE 359
Query: 147 MEFAHSLRHSKVNIKICQYSYELLLQYLHKTQSTKMLGIINERINFQVSPGQPSSISDDA 206
E R+++ NIK+C YS+ELL+ +LH++ +LG+IN+ I+ VS +P I D+
Sbjct: 360 NELVDLFRNNRWNIKMCAYSFELLMSFLHQSNFILLLGLINQYIHINVSNLRPGFIDDEQ 419
Query: 207 EIVTLIGSNQDAANQINQKEVHWGLLEDSLENRLEKTGLISDSEKAEGE--------NKE 258
++ S +DA + +N +++ + E+ + L+ EK + E +
Sbjct: 420 YSISF-QSEKDAGD-LNSTPINYHAFKPEFEDDV----LVQQKEKQQLEQGRILPLTDPN 473
Query: 259 AEIDENKKRPVEGGKQGASIKKLKKDKAINATAKTSRLEANTVSTAPRVKPDLALPVMPT 318
A + P I KLKK K R+ +++ ++ +P +
Sbjct: 474 APLPPVVAPPPPPPPTSGYIPKLKKKDKKKKEVKDERMS--------KIESNVPIPNLTE 525
Query: 319 EVEQSILEDLRNRVHLSSAALPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVW 378
E ++ED V LSS+ LPS+ FYT NT+ GLN IS+D LVAGGFSDSS+K+W
Sbjct: 526 RFENELMEDFTKCVSLSSSHLPSICFYTIFNTYQGLNTTDISKDAQLVAGGFSDSSVKIW 585
Query: 379 DMAKLGQQAVSSGLQGENDTTPREDII--G--PNGR----KRSYTLYQGHSGPVYSASFS 430
++ ++ +Q + Q + +++ G NG S + SG + S
Sbjct: 586 NLKEMKEQRLQQQQQQQQQQQQQQNSNQNGYFENGNFASSASSASSAMNGSGNNNENNKS 645
Query: 431 PLGDFILSS-SADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARI 489
+ L+S S+ ++ +L + + + GH+ PV+ F+P Y S S D TAR+
Sbjct: 646 TTANNNLNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARL 705
Query: 490 WSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSM 549
WSM+ + L GH V V + Y AT S D+T RLW + +RIF GH S
Sbjct: 706 WSMETMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSD 765
Query: 550 ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSA 609
++ P+ Y+A+G D + +W++ +G+CV MGH + ++T+A+S +G LLA+
Sbjct: 766 CNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGE 825
Query: 610 DCTVKLWDVTTSTKVLKTE 628
D +V LWD++T KV K +
Sbjct: 826 DTSVILWDLSTGKKVKKMD 844
Score = 740 (265.6 bits), Expect = 2.2e-78, Sum P(2) = 2.2e-78
Identities = 135/258 (52%), Positives = 186/258 (72%)
Query: 410 RKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
++ + + GHSGPVY SFSP ++LS S DTT RLWS + +NLVCYKGHN+PVWDV
Sbjct: 668 KESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDV 727
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
F+P G YFA++SHDRTAR+W+ + I PLRI GHLSD + VR+H N NY+ATGS+DK+
Sbjct: 728 SFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSA 787
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
RLW++ +G+CVRIF+GHR+ I ++A SPDGR +A+ ED ++++WDL++G+ V + GHT
Sbjct: 788 RLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHT 847
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLWDV--------TTSTKVLKTEEKSGTNRLRS--- 638
CV++L +SC+GS+LASGS+DCTV+LWDV +T L +E L+S
Sbjct: 848 KCVYSLDFSCDGSILASGSSDCTVRLWDVKKAFNSSLSTQPSSLINDESRKRKTLKSKLF 907
Query: 639 ----LKTLPTKSTPVYSL 652
L+T PTK TPVY++
Sbjct: 908 SDELLETYPTKQTPVYNV 925
Score = 67 (28.6 bits), Expect = 6.4e-87, Sum P(2) = 6.4e-87
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 10 VATYLKKKGFSEAENALQAEIQRNKSSNNTNPIDILND 47
V YL+KKG++ AE L+ EI N S + ++PI +D
Sbjct: 195 VLNYLRKKGYTNAEAILKQEIF-NSSQSMSSPISPSDD 231
Score = 66 (28.3 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 27/102 (26%), Positives = 44/102 (43%)
Query: 167 YEL-LLQYLHKTQSTKMLGIINERI-NFQVSPGQPSSISDDAEIVTLIGSNQDAANQINQ 224
Y+L +L YL K T I+ + I N S P S SDD E +NQ N +
Sbjct: 191 YDLAVLNYLRKKGYTNAEAILKQEIFNSSQSMSSPISPSDD-EATNTTTTNQTNINTVTD 249
Query: 225 KEVHWGLLEDSLENRLEKTGLISDSEKAEGENKEAEIDENKK 266
+ G +D + + + + S K + N + +++ KK
Sbjct: 250 ---NLGSSDD--QELAQYLHMYNSSNKGDTSNPQNYLEQYKK 286
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 713 (256.0 bits), Expect = 1.9e-83, Sum P(2) = 1.9e-83
Identities = 151/356 (42%), Positives = 201/356 (56%)
Query: 282 KKDKAINATAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLSSAALPS 341
+ D + A+ +SR E N + D+ P++ E +L++ RV +L +
Sbjct: 222 RTDYQLYASGSSSRSEGNGLEPT-----DMPAPILQNEAALEVLQESIKRVKDGPPSLTT 276
Query: 342 VSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMA--KLGQ---QAVSSGLQGEN 396
+ FY F NT LN A IS D L+A GF +S +K+W + KL Q S +
Sbjct: 277 ICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLAC 336
Query: 397 DTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANL 456
D ED N L +GH GPVYS F +LS S D +IR W N
Sbjct: 337 DILEEEDDEDDNAGTEMKIL-RGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNT 395
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN 516
V Y+GH YPVWD+ +P YFAS SHDRTAR+WS DR PLRI AGHL+DVDCV++H N
Sbjct: 396 VLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPN 455
Query: 517 CNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
NY+ATGS+DKTVRLW G VR+F GHR +LSLA SP+G+Y+AS ED + +WDL
Sbjct: 456 SNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDL 515
Query: 577 ASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
ASG L GHT + +L +S + SL+AS S D +V++WD+ + + SG
Sbjct: 516 ASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSG 571
Score = 218 (81.8 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 62/227 (27%), Positives = 108/227 (47%)
Query: 347 FINTHNGLNCASISQDGSLV---AGGFSDSSL------KVWDMAKLGQQAVSSGLQGEND 397
F+ +GL S S+D S+ G F+++ L VWD+ + ++ G +D
Sbjct: 368 FLADSSGL--LSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDL-DISPYSLYFA-SGSHD 423
Query: 398 TTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLV 457
T R + R +Y GH V F P +++ + S D T+RLWS + ++
Sbjct: 424 RTAR---LWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVR 480
Query: 458 CYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINC 517
+ GH PV + F+P G Y AS+ D+ ++W + + + GH ++ + + +
Sbjct: 481 LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDS 540
Query: 518 NYIATGSSDKTVRLWDV-----------SSGECVRIFIGHRSMILSL 553
+ IA+ S D +VR+WD+ SSGE V ++ G S +LS+
Sbjct: 541 SLIASASMDNSVRVWDIRNTYCSTPADGSSGELVGVYTGQMSNVLSV 587
Score = 142 (55.0 bits), Expect = 1.9e-83, Sum P(2) = 1.9e-83
Identities = 38/200 (19%), Positives = 99/200 (49%)
Query: 5 QVVEFVATYLKKKGFSEAENALQAEIQRNKSSNNTNP-IDILNDPELSKFFRTFSESEDG 63
Q+ V+ YLK++ + +++ L+ ++ ++++ + + ++ + + +
Sbjct: 26 QIQMAVSCYLKRRQYVDSDGPLKQGLRLSQTAEEMAANLTVQSESGCANIVSA-APCQAE 84
Query: 64 PARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFRED 123
P +Y+ ++ +LR++ S + HE++ +LYP+F++ ++LV +F++ F
Sbjct: 85 PQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSPKSTVESFYSRF--- 141
Query: 124 HEMMHLRDLQK--LEGVLSPSHLEEMEFAHSLR---HSKVNIKICQYSYELLLQYLHKTQ 178
H M QK +E + + ++++ LR +K +++ + SY L++YL
Sbjct: 142 HGMFLQNASQKDVIEQLQTTQTIQDILSNFKLRAFLDNKYVVRLQEDSYNYLIRYLQSDN 201
Query: 179 STKMLGIINERINFQVSPGQ 198
+T + ++ I+ V P +
Sbjct: 202 NTALCKVLTLHIHLDVQPAK 221
Score = 78 (32.5 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 36/118 (30%), Positives = 52/118 (44%)
Query: 286 AINATAKTSRL----EANTVS--TAPRVKPDLALPVMPT-EVEQSILEDLRNRVHLSSAA 338
A +T KT RL + N+V T R P L+L P + S ED R L
Sbjct: 460 ATGSTDKTVRLWSAQQGNSVRLFTGHR-GPVLSLAFSPNGKYLASAGEDQR----LKLWD 514
Query: 339 LPSVSFYTFINTH-NGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGE 395
L S + Y + H + + + S D SL+A D+S++VWD+ + G GE
Sbjct: 515 LASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGE 572
Score = 51 (23.0 bits), Expect = 7.6e-74, Sum P(2) = 7.6e-74
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 273 KQGASIKKLKKDKAINATAKTSRLEANTVSTAP 305
KQG + + ++ A N T ++ AN VS AP
Sbjct: 48 KQGLRLSQTAEEMAANLTVQSESGCANIVSAAP 80
Score = 38 (18.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 624 VLKTEEKSGTNRLRSLKTLPTKSTPVYSLQVL 655
+L+ E+ N +K L PVYS + L
Sbjct: 338 ILEEEDDEDDNAGTEMKILRGHCGPVYSTRFL 369
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
Identities = 207/601 (34%), Positives = 320/601 (53%)
Query: 67 YQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEM 126
Y Y LR W +LDLYK +L VLYP+F+H ++DL+ K + A FF +FR +HE+
Sbjct: 60 YVQVYILLRDWIDGTLDLYKPKLQKVLYPIFVHSYLDLLQKNDPEMAIYFFESFRIEHEV 119
Query: 127 MHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQ---STKML 183
+H D++ L + S +EE+E A R +K I + +++LL+Q+L + + S ++
Sbjct: 120 LHGYDIRALAQLKIASDVEEIEIAQLYRKNKYRINFTRSTFDLLVQFLFENEVNGSGIII 179
Query: 184 GIINERINFQVSPGQPSSISD-DAEIVTLIGSNQDAANQINQKEVHWGLLEDSLENRLEK 242
++N+ I+ +++ Q D + + V + ++ I+++E G E L+ +
Sbjct: 180 RLLNQYIDIKITMPQVEGKEDPNVQAVYEMDEAKNEQTIISEQEGIPGHSEQLLDYNKQS 239
Query: 243 TGLISDSEKAEGENKEAEIDENKKRPVEGGKQGAS-IKKLKKDKAINATAKTSRLEANTV 301
L E + E K + VEG + + I K+ T K + + +T+
Sbjct: 240 IQLGLRPLSEEVVTTLKNLLEVKDKDVEGRNEALNKILHPAKNLVELLTEKENLINESTL 299
Query: 302 STAPRVKPDLALPVMPTEVEQ-----SILEDLRNRVHLSSAAL-PSVSFYTFINTHNGLN 355
+ P P LP PT+++ S+LE +N + L A PSV YT NT + +N
Sbjct: 300 ES-PSDPP---LP--PTKMKDIDYFVSLLESEQNSLILGKNATDPSVFMYTMHNTLSAVN 353
Query: 356 CASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYT 415
CA+ S D S+ A G +DSS+ ++ G Q + + +N+ + +IG
Sbjct: 354 CAAFSDDASMFALGCADSSIHLYSSTNNGPQPL---VGSQNEPLQKSSLIG--------- 401
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQG 475
H+ PV+ S SP +FILS S D RLWS + +V Y GHN P+WDVQF+P G
Sbjct: 402 ----HTRPVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFG 457
Query: 476 HYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS 535
+YFA++SHD+TAR+W ++ PLR+ GH +DVDCV +H N Y+ATGSSD T R+WDV
Sbjct: 458 YYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVR 517
Query: 536 SGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTL 595
+G VR+F H S + +L MS DG +AS DE G I +WDL S + H+S V++L
Sbjct: 518 TGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSL 577
Query: 596 AYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQVL 655
++S + +L SG AD V WD+T L E+S L TK+T + +L
Sbjct: 578 SFSYDNKILVSGGADTDVNFWDLTYRNN-LSDGEQSPL-----LFNFKTKNTIIQNLSFT 631
Query: 656 R 656
R
Sbjct: 632 R 632
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 173/605 (28%), Positives = 288/605 (47%)
Query: 8 EFVATYLKKKGFSEAENALQAEIQRNKSSNNTNPIDILNDPELSKFFRTFSESEDGPARY 67
+ V YL KKG+S E L+ EI ++ I PE + + SE Y
Sbjct: 17 KIVLDYLFKKGYSRTEAMLRLEI------SSVGAI-----PEEQQDWH-IGASET----Y 60
Query: 68 QDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMM 127
Y LR W +LDLYK +L VLYP+F+H ++DL+ K + A FF +FR +HE++
Sbjct: 61 VQVYILLRDWIDGTLDLYKPKLQKVLYPIFVHSYLDLLQKNDPEMAIYFFESFRIEHEVL 120
Query: 128 HLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQ---STKMLG 184
H D++ L + S +EE+E A R +K I + +++LL+Q+L + + S ++
Sbjct: 121 HGYDIRALAQLKIASDVEEIEIAQLYRKNKYRINFTRSTFDLLVQFLFENEVNGSGIIIR 180
Query: 185 IINERINFQVSPGQPSSISD-DAEIVTLIGSNQDAANQINQKEVHWGLLEDSLE-NRLE- 241
++N+ I+ +++ Q D + + V + ++ I+++E G E L+ N+
Sbjct: 181 LLNQYIDIKITMPQVEGKEDPNVQAVYEMDEAKNEQTIISEQEGIPGHSEQLLDYNKQSI 240
Query: 242 KTGLISDSEKAEGENKEAEIDENKKRPVEGGKQGAS-IKKLKKDKAINATAKTSRLEANT 300
+ GL SE+ K + E K + VEG + + I K+ T K + + +T
Sbjct: 241 QLGLRPLSEEVVTTLKN--LLEVKDKDVEGRNEALNKILHPAKNLVELLTEKENLINEST 298
Query: 301 VSTAPRVKPDLALPVMPTEVEQ--SILEDLRNRVHLSSAAL-PSVSFYTFINTHNGLNCA 357
+ + P P L P +++ S+LE +N + L A PSV YT NT + +NCA
Sbjct: 299 LES-PS-DPPLP-PTKMKDIDYFVSLLESEQNSLILGKNATDPSVFMYTMHNTLSAVNCA 355
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAV---------SSGLQGEN------DTTPRE 402
+ S D S+ A G +DSS+ ++ G Q + S L G +P++
Sbjct: 356 AFSDDASMFALGCADSSIHLYSSTNNGPQPLVGSQNEPLQKSSLIGHTRPVFGVSISPQK 415
Query: 403 DII---GPNGRKRSY------TL--YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTK 451
+ I +G R + T+ Y GH+ P++ FSP G + ++S D T RLW +
Sbjct: 416 EFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHDQTARLWDVE 475
Query: 452 LNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCV 511
A L + GH V V F+P Y A+ S D T R+W + +R+ H S V +
Sbjct: 476 HAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSAL 535
Query: 512 RWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTI 571
+ +A+ +++WD+ S F+ H S++ SL+ S D + + SG D +
Sbjct: 536 CMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKILVSGGADTDV 595
Query: 572 MMWDL 576
WDL
Sbjct: 596 NFWDL 600
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 823 (294.8 bits), Expect = 4.5e-82, P = 4.5e-82
Identities = 171/363 (47%), Positives = 225/363 (61%)
Query: 305 PRVKPDLALPVMPTEVEQSILEDLRN------RVHLSSAALPSVSFYTFINTHN-GLNCA 357
P P +P +P + L+ + N RV L LPS+ FYTF+N + GL
Sbjct: 178 PNAPPQNRIP-LPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQQGLTAV 236
Query: 358 SISQDGSLVAGGFSDSSLKVWDMA--KLG--QQAVSSGLQGENDTTPREDIIGPNGRKRS 413
++ D SL+AGGF+DS+++VW + KL +QA L + E I+
Sbjct: 237 DVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASEL 296
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNP 473
LY GHSGPVY ASFSP +++LSSS D T+RLWS + LV YKGHNYPVWD QF+P
Sbjct: 297 KILY-GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 355
Query: 474 QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
G+YF S HDR AR+W+ D QPLRI AGHL+DV+C R+H N NY+ATGS+D+TVRLWD
Sbjct: 356 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD 415
Query: 534 VSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVW 593
V +G CVRIF GH+ I SL SP+GR++A+G DG +++WD+ G V L GHT V
Sbjct: 416 VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVC 475
Query: 594 TLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQ 653
+L +S +G +LASGS D TV+LWD + + L+T+ + L L T TKSTPV L
Sbjct: 476 SLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDN---SQELL-LGTYMTKSTPVVHLH 531
Query: 654 VLR 656
R
Sbjct: 532 FTR 534
Score = 344 (126.2 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 126/510 (24%), Positives = 223/510 (43%)
Query: 46 NDPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLV 105
+ P++S +++ D P Y++ YS L+ + SLD ++ EL + YP+F+H +++LV
Sbjct: 6 DQPDVSAVLSAYNQQGD-PTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELV 64
Query: 106 AKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEF--AHSLRHSKVNIKIC 163
H EA++FF + L + + S L+ + F SL SK ++I
Sbjct: 65 YNQHENEAKSFFEKYHTSFLKAAHSSLFFMSLTKTMSLLDFLFFFLILSLLRSKFVLRIS 124
Query: 164 QYSYELLLQYLHKTQSTKMLGIINERINFQVSPGQPSSISDDAEIVTLIGSNQDAANQIN 223
+ SY+LL ++L + Q+ ++ I+ E + + G P S + + QD N
Sbjct: 125 RDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRS-KQQIDAMGSKSKKQDP-NAPP 182
Query: 224 QKEVHWGLLEDSLENRLEKTGLISDSEKAEGENKEAEIDENKKRPVEGGKQGASIKKLKK 283
Q + L+DS ++L+K + ++ K + + +QG + +
Sbjct: 183 QNRIPLPELKDS--DKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQQGLTAVDVTD 240
Query: 284 DKAINATA---KTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLSSAAL- 339
D ++ A T R+ + T VK L ++ E + +LE + + S +
Sbjct: 241 DSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDD-VLERIMDEKTASELKIL 299
Query: 340 --PSVSFY--TFINTHNGLNCASISQDGSL---------VAGGFSDSSLKVWD--MAKLG 384
S Y +F N L S S+DG++ G+ + VWD + G
Sbjct: 300 YGHSGPVYGASFSPDRNYL--LSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG 357
Query: 385 QQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
VS G +D R + + ++ GH V F P +++ + SAD T
Sbjct: 358 YYFVSGG----HDRVAR---LWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRT 410
Query: 445 IRLWSTKLNANLV-CYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAG 503
+RLW LN N V + GH P+ + F+P G + A+ + D +W + + + G
Sbjct: 411 VRLWDV-LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKG 469
Query: 504 HLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
H V +R+ + +A+GS D TVRLWD
Sbjct: 470 HTDTVCSLRFSRDGEILASGSMDNTVRLWD 499
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 692 (248.7 bits), Expect = 4.0e-81, Sum P(2) = 4.0e-81
Identities = 144/317 (45%), Positives = 189/317 (59%)
Query: 310 DLALPVMPTEVEQSILEDLRNRVHLSSAALPSVSFYTFINTHNGLNCASISQDGSLVAGG 369
D+ P++ E + LE+ RV +L ++ FY F NT LN A +S D L+A G
Sbjct: 226 DMPAPILQNE---AALEESIKRVKDGPPSLTTIYFYAFYNTEQLLNTAEVSPDSKLLAAG 282
Query: 370 FSDSSLKVWDMA--KLGQ---QAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPV 424
F +S +K+W + KL Q S + D ED N L +GH GPV
Sbjct: 283 FDNSCIKLWSLRSKKLKSEPHQVDVSRIHLACDFLEEEDDEDDNLGTEMKVL-RGHCGPV 341
Query: 425 YSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHD 484
YS F +LS S D +IR W N V Y+GH YPVWD+ +P YFAS+SHD
Sbjct: 342 YSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASASHD 401
Query: 485 RTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFI 544
RTAR+WS DR PLRI AGHL+DVDCV++H N NY+ATGS+DKTVRLW G VR+F
Sbjct: 402 RTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFT 461
Query: 545 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLL 604
GHR +LSLA SP+G+Y+AS ED + +WDLASG L GHT + +L +S + SL+
Sbjct: 462 GHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLV 521
Query: 605 ASGSADCTVKLWDVTTS 621
AS S D +V++WD+ +S
Sbjct: 522 ASASMDNSVRVWDIRSS 538
Score = 320 (117.7 bits), Expect = 5.2e-36, Sum P(2) = 5.2e-36
Identities = 65/175 (37%), Positives = 94/175 (53%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQG 475
LYQGH+ PV+ SP + S+S D T RLWS L Y GH V V+F+P
Sbjct: 375 LYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNS 434
Query: 476 HYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS 535
+Y A+ S D+T R+WS + +R+ GH V + + N Y+A+ D+ ++LWD++
Sbjct: 435 NYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA 494
Query: 536 SGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
SG + GH I SL SPD +AS D ++ +WD+ S C TP G +S
Sbjct: 495 SGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSS 549
Score = 240 (89.5 bits), Expect = 8.0e-27, Sum P(2) = 8.0e-27
Identities = 59/199 (29%), Positives = 89/199 (44%)
Query: 452 LNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCV 511
L + +GH PV+ +F S S D + R W + + GH V
Sbjct: 327 LGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPV--- 383
Query: 512 RWHINCN----YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDE 567
W ++ + Y A+ S D+T RLW +RI+ GH + + + P+ Y+A+G
Sbjct: 384 -WDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGST 442
Query: 568 DGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
D T+ +W G V GH V +LA+S G LAS D +KLWD+ + T L
Sbjct: 443 DKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGT--LYK 500
Query: 628 EEKSGTNRLRSLKTLPTKS 646
E + T+ + SL P S
Sbjct: 501 ELRGHTDNITSLTFSPDSS 519
Score = 214 (80.4 bits), Expect = 6.5e-24, Sum P(2) = 6.5e-24
Identities = 45/155 (29%), Positives = 79/155 (50%)
Query: 412 RSYTL--YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
R+Y L Y GH V F P +++ + S D T+RLWST+ ++ + GH PV +
Sbjct: 411 RTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSL 470
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
F+P G Y AS+ D+ ++W + + + GH ++ + + + + +A+ S D +V
Sbjct: 471 AFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSV 530
Query: 530 RLWDVSSGEC-----------VRIFIGHRSMILSL 553
R+WD+ S C V ++ G S +LS+
Sbjct: 531 RVWDIRSSHCSTPADGSSSELVGVYTGQMSNVLSV 565
Score = 141 (54.7 bits), Expect = 4.0e-81, Sum P(2) = 4.0e-81
Identities = 47/245 (19%), Positives = 113/245 (46%)
Query: 5 QVVEFVATYLKKKGFSEAENALQAEIQRNKSSNNTNPIDILNDPELSKFFRTFSESEDGP 64
Q+ V+ YLK++ + +A+ Q + + + ++ + + + P
Sbjct: 8 QIQMAVSCYLKRRQYGDADGPKQILRLSQSTEEMAASLTVQSESGCANIVSA-APCQAEP 66
Query: 65 ARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDH 124
+Y+ ++ +LR++ S + HE++ +LYP+F++ + L+ +F++ F H
Sbjct: 67 QQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLTLIQNSPKSTVESFYSRF---H 123
Query: 125 EMMHLRDLQK--LEGVLSPSHLEEMEFAHSLR---HSKVNIKICQYSYELLLQYLHKTQS 179
M QK +E + + ++++ LR +K +++ + SY LL+YL +
Sbjct: 124 GMFLQNASQKDVIEQLQTTQTIQDILSNFRLRAFLDNKYVVRLQEDSYNYLLRYLQSDNN 183
Query: 180 TKMLGIINERINFQVSPGQPSSISDDAEIVTLIGSNQDAANQINQKEVHWGLLED--SLE 237
T + I+ I+ V P + + D ++ T GS + + ++ +L++ +LE
Sbjct: 184 TALCRILAWHIHLDVQPAKRT----DYQLYTSGGSFRGEGGGLEPADMPAPILQNEAALE 239
Query: 238 NRLEK 242
+++
Sbjct: 240 ESIKR 244
Score = 41 (19.5 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 270 EGGKQGASIKKLKKDKAINATAKTSRLEANTVSTAP 305
+G KQ + + ++ A + T ++ AN VS AP
Sbjct: 26 DGPKQILRLSQSTEEMAASLTVQSESGCANIVSAAP 61
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 758 (271.9 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 166/441 (37%), Positives = 259/441 (58%)
Query: 187 NERINFQVS--PGQPSSISDDAEIVTLIGSNQDAANQINQKEVHWGLLEDSLENRLEKTG 244
N + N +++ P + D E V I + + +K+++ D+ +T
Sbjct: 305 NGKQNLEMNSVPVKLGPFPKDEEFVKEIETELKIKDD-QEKQLNQQTAGDNYSGANNRT- 362
Query: 245 LISDSEKAEGENKEAEIDENKKRPVEGGKQGASIKKLKKDKAINATAKTSRLEANTVSTA 304
L+ + + E + ++ K ++ K +K + + ++ K S L +
Sbjct: 363 LLQEYKAMNNEKFKDNTGDDDKDKIKD-KIAKDEEKKESELKVDGEKKDSNLSSPARDIL 421
Query: 305 PRVKPDLALPVMPTEVEQSILEDLRNRVHLSSA--ALPSVSFYTFINTHNGLNCASISQD 362
P + P AL + E+++ +++ R+ + L + ALPSV YTF NT+ ++C S D
Sbjct: 422 P-LPPKTALD-LKLEIQK--VKESRDAIKLDNLQLALPSVCMYTFQNTNKDMSCLDFSDD 477
Query: 363 GSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSG 422
+ A GF DS +K+W + G + + N+ ED P + TL GHSG
Sbjct: 478 CRIAAAGFQDSYIKIWSLD--GSSLNNPNI-ALNNNDKDED---PTCK----TLV-GHSG 526
Query: 423 PVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSS 482
VYS SFSP ++LS S D T+RLWS + LV YKGHN+PVWDV F+P GHYFA++S
Sbjct: 527 TVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATAS 586
Query: 483 HDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRI 542
HD+TAR+WS D I PLRI AGHL+DVDCV +H N Y+ TGSSDKT R+WDVS+G+ VR+
Sbjct: 587 HDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRL 646
Query: 543 FIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH-TSCVWTLAYSCEG 601
F+GH + ++S+A+ PDGR++++G EDG I +WD+ +G+ + + GH + +++L+YS EG
Sbjct: 647 FLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEG 706
Query: 602 SLLASGSADCTVKLWDVTTST 622
++L SG AD TV++WD+ +T
Sbjct: 707 NVLISGGADHTVRVWDLKKAT 727
Score = 290 (107.1 bits), Expect = 3.8e-41, Sum P(3) = 3.8e-41
Identities = 65/179 (36%), Positives = 95/179 (53%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH+ V+ F+P Y S S D+T R+WSMD L GH V V + +Y
Sbjct: 523 GHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYF 582
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
AT S D+T RLW +RIF GH + + ++ P+G Y+ +G D T MWD+++G
Sbjct: 583 ATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGD 642
Query: 581 CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSL 639
V +GHT+ V ++A +G L++GS D + +WD+ T K LK G N + SL
Sbjct: 643 SVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTG-KRLKQMRGHGKNAIYSL 700
Score = 221 (82.9 bits), Expect = 3.8e-41, Sum P(3) = 3.8e-41
Identities = 56/203 (27%), Positives = 106/203 (52%)
Query: 59 ESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFN 118
E + P Y YS L++W SSL++YK EL +++YP+FI+ F++LVAK + AR FF+
Sbjct: 144 EGLNAPENYIRAYSMLKNWVDSSLEIYKPELSYIMYPIFIYLFLNLVAKNPVY-ARRFFD 202
Query: 119 NFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQ 178
F D + H ++ +L V S H++E E A + + K I + + + LLL +L++ +
Sbjct: 203 RFSPDFKDFHGSEINRLFSVNSIDHIKENEVASAFQSHKYRITMSKTTLNLLLYFLNENE 262
Query: 179 S---TKMLGIINERI--NFQVSPGQPSSISDDAEIVTLIGSNQDAAN-QINQKEVHWGLL 232
S + ++ +IN+ + N S ++D ++++ + N ++N V G
Sbjct: 263 SIGGSLIISVINQHLDPNIVESVTAREKLADGIKVLSDSENGNGKQNLEMNSVPVKLGPF 322
Query: 233 --EDSLENRLEKTGLISDSEKAE 253
++ +E I D ++ +
Sbjct: 323 PKDEEFVKEIETELKIKDDQEKQ 345
Score = 171 (65.3 bits), Expect = 3.9e-28, Sum P(3) = 3.9e-28
Identities = 36/126 (28%), Positives = 62/126 (49%)
Query: 499 RIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPD 558
+ + GH V + + Y+ +GS DKTVRLW + + + + GH + ++ SP
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL 578
Query: 559 GRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
G Y A+ D T +W + GH + V +++ G + +GS+D T ++WDV
Sbjct: 579 GHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDV 638
Query: 619 TTSTKV 624
+T V
Sbjct: 639 STGDSV 644
Score = 89 (36.4 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 581 CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
C T L+GH+ V++ ++S + L SGS D TV+LW + T T ++
Sbjct: 518 CKT-LVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALV 561
Score = 52 (23.4 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 10 VATYLKKKGFSEAENALQAEIQRNKSSNN 38
V YL KKG+ E L+AE R + N
Sbjct: 64 VLEYLNKKGYHRTEAMLRAESGRTLTPQN 92
Score = 37 (18.1 bits), Expect = 5.3e-21, Sum P(2) = 5.3e-21
Identities = 22/71 (30%), Positives = 30/71 (42%)
Query: 26 LQAEIQRNKSSNNTNPIDILNDPELSKFFRTFSE----------SED---GPARYQDEYS 72
L+ EIQ+ K S + +D L S TF S+D A +QD Y
Sbjct: 431 LKLEIQKVKESRDAIKLDNLQLALPSVCMYTFQNTNKDMSCLDFSDDCRIAAAGFQDSYI 490
Query: 73 KLRSWTYSSLD 83
K+ S SSL+
Sbjct: 491 KIWSLDGSSLN 501
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 640 (230.4 bits), Expect = 1.6e-75, Sum P(2) = 1.6e-75
Identities = 132/313 (42%), Positives = 183/313 (58%)
Query: 310 DLALPVMPTEVEQSILEDLRNRVHLSSAALPSVSFYTFINTHNGLNCASISQDGSLVAGG 369
DL + ++ E + L++ V +L ++ Y F NT LN A S D L+A G
Sbjct: 227 DLPMYILQKEEDLDFLQETIKSVQDGPPSLITIYSYAFYNTEQLLNTAEASPDNKLLATG 286
Query: 370 FSDSSLKVWDM-AKLGQ---QAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVY 425
++SS+K+W + +K Q S + NDT D +R L GH GPVY
Sbjct: 287 LNNSSIKLWSLTSKFKSKPHQIDVSHIHLINDTL-EVDEEDRTATERKVLL--GHCGPVY 343
Query: 426 SASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDR 485
S F P +LS S DT+IR W + N V Y+GH YPVWD+ +P +FAS+S+D
Sbjct: 344 STRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSLFFASASYDH 403
Query: 486 TARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIG 545
TAR+WS DR PLRI AGHL+ VDCV++H N NY+ATGS+DKTVRLW G VR+F G
Sbjct: 404 TARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTG 463
Query: 546 HRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLA 605
H + LA SP+G+Y+ S ED + +WDLASG L GHT + ++ +S + S++A
Sbjct: 464 HCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIA 523
Query: 606 SGSADCTVKLWDV 618
S S D +V++WD+
Sbjct: 524 SASMDNSVRIWDI 536
Score = 302 (111.4 bits), Expect = 8.5e-34, Sum P(2) = 8.5e-34
Identities = 63/175 (36%), Positives = 92/175 (52%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQG 475
LYQGH+ PV+ SP F S+S D T RLWS L Y GH V V+F+P
Sbjct: 376 LYQGHAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNS 435
Query: 476 HYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS 535
+Y A+ S D+T R+WS + +R+ GH V C+ + N Y+ + D+ ++LWD++
Sbjct: 436 NYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLA 495
Query: 536 SGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
SG + GH I S+ S D +AS D ++ +WD+ S TP G +S
Sbjct: 496 SGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKSKHNSTPADGSSS 550
Score = 221 (82.9 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 50/166 (30%), Positives = 75/166 (45%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCN-- 518
GH PV+ +F P S S D + R W ++ + GH V W ++ +
Sbjct: 337 GHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPV----WDLDISPH 392
Query: 519 --YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
+ A+ S D T RLW +RI+ GH + + + P+ Y+A+G D T+ +W
Sbjct: 393 SLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSA 452
Query: 577 ASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTST 622
G V GH V LA+S G L S D +KLWD+ + T
Sbjct: 453 QQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGT 498
Score = 151 (58.2 bits), Expect = 7.8e-17, Sum P(2) = 7.8e-17
Identities = 50/207 (24%), Positives = 88/207 (42%)
Query: 424 VYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV--QFNPQGHYF-AS 480
+YS +F + ++ A +L +T LN + + +W + +F + H S
Sbjct: 259 IYSYAFYNTEQLLNTAEASPDNKLLATGLNNSSI-------KLWSLTSKFKSKPHQIDVS 311
Query: 481 SSH--DRTARIWSMDRIQPLR-IMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
H + T + DR R ++ GH V R+ + + + + S D ++R WD+ S
Sbjct: 312 HIHLINDTLEVDEEDRTATERKVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESF 371
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY 597
++ GH + L +SP + AS D T +W + GH + V + +
Sbjct: 372 TNTVLYQGHAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKF 431
Query: 598 SCEGSLLASGSADCTVKLWDVTTSTKV 624
+ LA+GS D TV+LW V
Sbjct: 432 HPNSNYLATGSTDKTVRLWSAQQGNSV 458
Score = 140 (54.3 bits), Expect = 1.6e-75, Sum P(2) = 1.6e-75
Identities = 44/201 (21%), Positives = 95/201 (47%)
Query: 2 DELQVVEFVATYLKKKGFSEAENALQAEIQRNKSSNN-TNPIDILNDPELSKFFRTFSES 60
+E+Q V+ YLK + + A+ + ++ ++S + + + ++ +
Sbjct: 7 EEMQTA--VSCYLKSRQYRGADGPPKQGLRLSQSVQDMATSLAVQSESGCANTVSAAPCQ 64
Query: 61 EDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNF 120
D P +Y+ ++ +LR + S + HEL+ +LYP+F++ +DLV A +F+++F
Sbjct: 65 AD-PQQYEVQFGRLRDFLMDSDSQHSHELMPLLYPLFVYLHLDLVQNSPKSTAESFYSHF 123
Query: 121 REDHEMMHLRDLQK--LEGVLSPSHLEEMEFAHSLR---HSKVNIKICQYSYELLLQYLH 175
H M QK +E + + ++++ LR +K +++ + Y LL YL
Sbjct: 124 ---HGMFLQNASQKDVIEQLQTTQTIQDILSNFRLRAFLDNKYVVRLPEDCYNYLLCYLQ 180
Query: 176 KTQSTKMLGIINERINFQVSP 196
+T + ++ I+ V P
Sbjct: 181 SDNNTALCRVLTWHIHLDVQP 201
Score = 79 (32.9 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 27/117 (23%), Positives = 51/117 (43%)
Query: 353 GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT---TPREDIIGPNG 409
G++C + + +A G +D ++++W + + +G G +P + G
Sbjct: 425 GVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAG 484
Query: 410 RKR--------SYTLYQ---GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNAN 455
+ S TLY+ GH+ + S +FS I S+S D ++R+W K N
Sbjct: 485 EDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKSKHN 541
Score = 72 (30.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 26/106 (24%), Positives = 53/106 (50%)
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
+ATG ++ +++LW ++S + H+ + + + D + +ED T A+
Sbjct: 283 LATGLNNSSIKLWSLTSKFKSK---PHQIDVSHIHLINDT--LEVDEEDRT------ATE 331
Query: 580 RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
R V L+GH V++ + + S L S S D +++ WD+ + T +
Sbjct: 332 RKV--LLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTV 375
Score = 65 (27.9 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 339 LPSVSFYTFINTH-NGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGE 395
L S + Y ++ H + + + S D S++A D+S+++WD+ + G E
Sbjct: 494 LASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKSKHNSTPADGSSSE 551
Score = 49 (22.3 bits), Expect = 6.1e-66, Sum P(2) = 6.1e-66
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 273 KQGASIKKLKKDKAINATAKTSRLEANTVSTAP 305
KQG + + +D A + ++ ANTVS AP
Sbjct: 30 KQGLRLSQSVQDMATSLAVQSESGCANTVSAAP 62
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
Identities = 150/342 (43%), Positives = 198/342 (57%)
Query: 282 KKDKAINATAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLSSAALPS 341
+ D + A+ +SR E N + P PD+ P++ E +L++ RV +L +
Sbjct: 204 RTDYQLYASGSSSRSENNGLE--P---PDMPSPILQNEAALEVLQESIKRVKDGPPSLTT 258
Query: 342 VSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMA--KLGQ---QAVSSGLQGEN 396
+ FY F NT LN A IS D L+A GF +S +K+W + KL Q S +
Sbjct: 259 ICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLAC 318
Query: 397 DTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANL 456
D ED N L +GH GPVYS F +LS S D +IR W N
Sbjct: 319 DILEEEDDEDDNAGTEMKIL-RGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNT 377
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN 516
V Y+GH YPVWD+ +P YFAS SHDRTAR+WS DR PLRI AGHL+DVDCV++H N
Sbjct: 378 VLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPN 437
Query: 517 CNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
NY+ATGS+DKTVRLW G VR+F GHR +LSLA SP+G+Y+AS ED + +WDL
Sbjct: 438 SNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDL 497
Query: 577 ASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
ASG L GHT + +L +S + L+AS S D +V++WD+
Sbjct: 498 ASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDI 539
Score = 308 (113.5 bits), Expect = 2.1e-24, P = 2.1e-24
Identities = 63/175 (36%), Positives = 92/175 (52%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQG 475
LYQGH+ PV+ SP + S S D T RLWS L Y GH V V+F+P
Sbjct: 379 LYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNS 438
Query: 476 HYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS 535
+Y A+ S D+T R+WS + +R+ GH V + + N Y+A+ D+ ++LWD++
Sbjct: 439 NYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA 498
Query: 536 SGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
SG + GH I SL SPD +AS D ++ +WD+ + C P G +S
Sbjct: 499 SGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSS 553
Score = 308 (113.5 bits), Expect = 2.1e-24, P = 2.1e-24
Identities = 124/585 (21%), Positives = 258/585 (44%)
Query: 5 QVVEFVATYLKKKGFSEAENALQAEIQRNKSSNNTNP-IDILNDPELSKFFRTFSESEDG 63
Q+ V+ YLK++ + +++ L+ ++ ++++ + + ++ + + +
Sbjct: 8 QIQMAVSCYLKRRQYVDSDGPLKQGLRLSQTAEEMAANLTVQSESGCANIVSA-APCQAE 66
Query: 64 PARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFRED 123
P +Y+ ++ +LR++ S + HE++ +LYP+F++ ++LV +F++ F
Sbjct: 67 PQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSPKSTVESFYSRF--- 123
Query: 124 HEMMHLRDLQK--LEGVLSPSHLEEMEFAHSLR---HSKVNIKICQYSYELLLQYLHKTQ 178
H M QK +E + + ++++ LR +K +++ + SY L++YL
Sbjct: 124 HGMFLQNASQKDVIEQLQTTQTIQDILSNFKLRAFLDNKYVVRLQEDSYNYLIRYLQSDN 183
Query: 179 STKMLGIINERINFQVSPGQPSSISDDAEIVTLIGSNQ-----DAANQINQKEVHWGLLE 233
+T + ++ I+ V P + + A + N D + I Q E +L+
Sbjct: 184 NTALCKVLTLHIHLDVQPAKRTDYQLYASGSSSRSENNGLEPPDMPSPILQNEAALEVLQ 243
Query: 234 DSLENRLEKTGLISDSEKAEGENKE-----AEIDENKKRPVEGGKQGASIKKLKKDKAIN 288
+S++ + ++ N E AEI + K + G + IK +
Sbjct: 244 ESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKL-LAAGFDNSCIKLW------S 296
Query: 289 ATAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLSSAALPSVSFYTFI 348
+K + E + V + R+ LA ++ E ++ ++ + + V F+
Sbjct: 297 LRSKKLKSEPHQVDVS-RIH--LACDILEEEDDED--DNAGTEMKILRGHCGPVYSTRFL 351
Query: 349 NTHNGLNCASISQDGSLV---AGGFSDSSL------KVWDMAKLGQQAVSSGLQGENDTT 399
+GL S S+D S+ G F+++ L VWD+ + ++ G +D T
Sbjct: 352 ADSSGL--LSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDL-DISPYSLYFA-SGSHDRT 407
Query: 400 PREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
R + R +Y GH V F P +++ + S D T+RLWS + ++ +
Sbjct: 408 AR---LWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLF 464
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
GH PV + F+P G Y AS+ D+ ++W + + + GH ++ + + +
Sbjct: 465 TGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGL 524
Query: 520 IATGSSDKTVRLWDV-----------SSGECVRIFIGHRSMILSL 553
IA+ S D +VR+WD+ SS E V ++ G S +LS+
Sbjct: 525 IASASMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQMSNVLSV 569
Score = 241 (89.9 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 58/188 (30%), Positives = 87/188 (46%)
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCN- 518
+GH PV+ +F S S D + R W + + GH V W ++ +
Sbjct: 339 RGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPV----WDLDISP 394
Query: 519 ---YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWD 575
Y A+GS D+T RLW +RI+ GH + + + P+ Y+A+G D T+ +W
Sbjct: 395 YSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWS 454
Query: 576 LASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNR 635
G V GH V +LA+S G LAS D +KLWD+ + T L E + T+
Sbjct: 455 AQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGT--LYKELRGHTDN 512
Query: 636 LRSLKTLP 643
+ SL P
Sbjct: 513 ITSLTFSP 520
Score = 155 (59.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 36/127 (28%), Positives = 59/127 (46%)
Query: 498 LRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSP 557
++I+ GH V R+ + + + + S D ++R WD+ S ++ GH + L +SP
Sbjct: 335 MKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISP 394
Query: 558 DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
Y ASG D T +W + GH + V + + + LA+GS D TV+LW
Sbjct: 395 YSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWS 454
Query: 618 VTTSTKV 624
V
Sbjct: 455 AQQGNSV 461
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
Identities = 152/356 (42%), Positives = 208/356 (58%)
Query: 282 KKDKAINATAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLSSAALPS 341
+ D + A+ +SR E N+ S P P++ P++ E +L++ RV +L +
Sbjct: 204 RTDYQLYASGGSSRTE-NS-SLEP---PEVPSPILQNEAALEVLQESIKRVKDGPPSLTT 258
Query: 342 VSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMA--KLGQQ---AVSSGLQGEN 396
+ FY F NT LN A IS D L+A GF +S +K+W + KL + +S ++
Sbjct: 259 ICFYAFYNTEQLLNTAEISSDSKLLAAGFDNSCIKLWSLRSKKLKSEPHHVDTSRIRLAC 318
Query: 397 DTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANL 456
DT E+ N L +GH GPVYS F +LS S D +IR W N
Sbjct: 319 DTLEEEENEEDNTGTEMKIL-RGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNT 377
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN 516
V Y+GH YPVWDV +P YFAS SHDRTAR+WS DR PLRI AGHL+DVDCV++H N
Sbjct: 378 VLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPN 437
Query: 517 CNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
NY+ATGS+DKTVRLW G VR+F GHR +LSL+ SP+G+Y+AS ED + +WDL
Sbjct: 438 SNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDL 497
Query: 577 ASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
ASG L GHT + +LA+S + L+AS S D +V++WD+ ++ + SG
Sbjct: 498 ASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSG 553
Score = 327 (120.2 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 133/589 (22%), Positives = 263/589 (44%)
Query: 5 QVVEFVATYLKKKGFSEAENALQAEIQRNKSSNNTNP-IDILNDPELSKFFRTFSESEDG 63
QV V+ YLK++ + ++E L+ ++ +++ + + ++ + + +
Sbjct: 8 QVQVAVSCYLKRRQYVDSEGPLKQGLRLSQTPEEMAANLTVQSESGCANAVSA-APCQAE 66
Query: 64 PARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFRED 123
P +Y+ ++ +LRS+ S Y E++ +LYP+F++ ++LV G +F++ F
Sbjct: 67 PQQYEVQFGRLRSFLTDSDSQYSREVMPLLYPLFVYLHLNLVQSGPKSTVESFYSRF--- 123
Query: 124 HEMMHLRDLQK--LEGVLSPSHLEEMEFAHSLR---HSKVNIKICQYSYELLLQYLHKTQ 178
H M QK +E + + ++++ LR +K +++ + SY L++YL
Sbjct: 124 HGMFLQNASQKDVIEQLQTTQTIQDILSNFQLRAFLDNKYVVRLQEDSYNYLIRYLQSDN 183
Query: 179 STKMLGIINERINFQVSPGQPSSISDDAEIVTLIGSNQDAANQINQKEVHWGLLED--SL 236
+T + ++ I+ V P + + D ++ GS++ + + EV +L++ +L
Sbjct: 184 NTALCKVLAVHIHLDVQPAKRT----DYQLYASGGSSRTENSSLEPPEVPSPILQNEAAL 239
Query: 237 ENRLEKTGLISDSEKAEGE-------NKE-----AEIDENKKRPVEGGKQGASIKKLKKD 284
E E + D + N E AEI + K + G + IK
Sbjct: 240 EVLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISSDSKL-LAAGFDNSCIKLW--- 295
Query: 285 KAINATAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLSSAALPSVSF 344
+ +K + E + V T+ R++ LA + E E++ ++ + + V
Sbjct: 296 ---SLRSKKLKSEPHHVDTS-RIR--LACDTL--EEEENEEDNTGTEMKILRGHCGPVYS 347
Query: 345 YTFINTHNGLNCASISQDGSLV---AGGFSDSSL------KVWDMAKLGQQAVSSGLQGE 395
F+ +GL S S+D S+ G F+++ L VWD+ + ++ G
Sbjct: 348 TRFLADSSGL--LSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDV-DISPFSLYFA-SGS 403
Query: 396 NDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNAN 455
+D T R + R +Y GH V F P +++ + S D T+RLWS + +
Sbjct: 404 HDRTAR---LWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNS 460
Query: 456 LVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHI 515
+ + GH PV + F+P G Y AS+ D+ ++W + + + GH + + +
Sbjct: 461 VRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSP 520
Query: 516 NCNYIATGSSDKTVRLWDV-----------SSGECVRIFIGHRSMILSL 553
+ IA+ S D +VR+WD+ SSGE V ++ G S +LS+
Sbjct: 521 DSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSV 569
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 142/314 (45%), Positives = 187/314 (59%)
Query: 310 DLALPVMPTEVEQSILEDLRNRVHLSSAALPSVSFYTFINTHNGLNCASISQDGSLVAGG 369
D+ P++ E +L++ RV +L ++ FY F NT LN A IS + L+A G
Sbjct: 227 DMPAPILQNEAALEVLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPESKLLAAG 286
Query: 370 FSDSSLKVWDMA--KLGQQA--VS-SGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPV 424
F +S +K+W + KL + V S + D ED + L +GH GPV
Sbjct: 287 FDNSCIKLWSLRSKKLKPEPHRVDVSRIHLACDILEEEDDEDDDVGTEMKVL-RGHCGPV 345
Query: 425 YSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHD 484
YS F +LS S D +IR W N V Y+GH YPVWDV +P YFAS SHD
Sbjct: 346 YSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHD 405
Query: 485 RTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFI 544
RTAR+WS DR PLRI AGHL+DVDCV++H N NY+ATGS+DKTVRLW G VR+F
Sbjct: 406 RTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFT 465
Query: 545 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLL 604
GHR +LSLA SP+G+Y+AS ED + +WDLASG L GHT + +L +S + SL+
Sbjct: 466 GHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLI 525
Query: 605 ASGSADCTVKLWDV 618
AS S D +V++WD+
Sbjct: 526 ASASMDNSVRVWDI 539
Score = 318 (117.0 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 128/584 (21%), Positives = 260/584 (44%)
Query: 5 QVVEFVATYLKKKGFSEAENALQAEIQRNKSSNNTNP-IDILNDPELSKFFRTFSESEDG 63
Q+ V+ YLK++ + +A+ L+ ++ ++S+ + + ++ + + +
Sbjct: 8 QIQMAVSCYLKRRQYGDADGPLKQGLRLSQSAEEMAANLAVQSESGCANIVSA-APCQAE 66
Query: 64 PARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFRED 123
P +Y+ ++ +LR++ S + HE++ +LYP+F++ ++LV +F++ F
Sbjct: 67 PQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSAKSTVESFYSRF--- 123
Query: 124 HEMMHLRDLQK--LEGVLSPSHLEEMEFAHSLR---HSKVNIKICQYSYELLLQYLHKTQ 178
H M QK +E + + ++++ LR +K +++ + SY LL+YL
Sbjct: 124 HGMFLQNASQKDVIEQLQTTQTVQDILSNFRLRAFLDNKYVVRLQEDSYNYLLRYLQSDN 183
Query: 179 STKMLGIINERINFQVSPGQPSSISDDAEIVTLIGSNQDAANQINQKEVHWGLLEDSLEN 238
+ + ++ I+ V P + + D ++ GS++ + + ++ +L++ E
Sbjct: 184 NAALCRVLTWHIHLDVQPAKRT----DYQLYASGGSSRGEGSGLEPTDMPAPILQN--EA 237
Query: 239 RLEKTGLISDSEKA--EGENKEAEIDENKKRPVEGGKQGASIKKLKKDKAI---NATAKT 293
LE ++ +S K +G I E A I K A N+ K
Sbjct: 238 ALE---VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPESKLLAAGFDNSCIKL 294
Query: 294 SRLEANTVSTAP-RV---KPDLALPVMPTEVEQSILEDLRNRVHLSSAALPSVSFYTFIN 349
L + + P RV + LA ++ E ++ +D+ + + V F+
Sbjct: 295 WSLRSKKLKPEPHRVDVSRIHLACDILEEEDDED--DDVGTEMKVLRGHCGPVYSTRFLA 352
Query: 350 THNGLNCASISQDGSLV---AGGFSDSSL------KVWDMAKLGQQAVSSGLQGENDTTP 400
+GL S S+D S+ G F+++ L VWD+ + ++ G +D T
Sbjct: 353 DSSGL--LSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDV-DISPYSLYFA-SGSHDRTA 408
Query: 401 REDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
R + R +Y GH V F P +++ + S D T+RLWS + ++ +
Sbjct: 409 R---LWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFT 465
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH PV + F+P G Y AS+ D+ ++W + + + GH ++ + + + + I
Sbjct: 466 GHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLI 525
Query: 521 ATGSSDKTVRLWDV-----------SSGECVRIFIGHRSMILSL 553
A+ S D +VR+WD+ SS E V ++ G S +LS+
Sbjct: 526 ASASMDNSVRVWDIRNTHCSAPTDGSSSELVGVYTGQMSNVLSV 569
Score = 312 (114.9 bits), Expect = 7.4e-25, P = 7.4e-25
Identities = 63/175 (36%), Positives = 92/175 (52%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQG 475
LYQGH+ PV+ SP + S S D T RLWS L Y GH V V+F+P
Sbjct: 379 LYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNS 438
Query: 476 HYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS 535
+Y A+ S D+T R+WS + +R+ GH V + + N Y+A+ D+ ++LWD++
Sbjct: 439 NYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA 498
Query: 536 SGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
SG + GH I SL SPD +AS D ++ +WD+ + C P G +S
Sbjct: 499 SGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTHCSAPTDGSSS 553
Score = 246 (91.7 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 60/190 (31%), Positives = 89/190 (46%)
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH---LSDVDCVRWHIN 516
+GH PV+ +F S S D + R W + + GH + DVD + +
Sbjct: 339 RGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSL- 397
Query: 517 CNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
Y A+GS D+T RLW +RI+ GH + + + P+ Y+A+G D T+ +W
Sbjct: 398 --YFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 577 ASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRL 636
G V GH V +LA+S G LAS D +KLWD+ + T L E + T+ +
Sbjct: 456 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGT--LFKELRGHTDNI 513
Query: 637 RSLKTLPTKS 646
SL P S
Sbjct: 514 TSLTFSPDSS 523
Score = 151 (58.2 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 34/127 (26%), Positives = 59/127 (46%)
Query: 498 LRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSP 557
++++ GH V R+ + + + + S D ++R WD+ S ++ GH + + +SP
Sbjct: 335 MKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISP 394
Query: 558 DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
Y ASG D T +W + GH + V + + + LA+GS D TV+LW
Sbjct: 395 YSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWS 454
Query: 618 VTTSTKV 624
V
Sbjct: 455 AQQGNSV 461
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
Identities = 146/321 (45%), Positives = 197/321 (61%)
Query: 304 APRVKPDLALPVMPTEVEQSILEDLRNRVHLSSAALPSVSFYTFINTHNGLNCASISQDG 363
A R++ LP +E L+D RV +L +V FY F +T LN A +S D
Sbjct: 235 AERLEVPAGLPQNEAALEN--LQDCIKRVREGPPSLTTVCFYAFQHTEQLLNTAEVSADS 292
Query: 364 SLVAGGFSDSSLKVWDMA----KLG-QQAVSSGLQGENDTTPRE-DIIGPNGRKRSYTLY 417
L+A GF +S++K+W + K G +A S ++ D E D +G + TL
Sbjct: 293 RLLAAGFDNSAVKLWSLRARKLKAGPHKADVSKIRLACDVLEEEADDEDASGSEIK-TL- 350
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GHSGPVY +F +LS S D+T+R W K N V Y+GH YPVWDV +P Y
Sbjct: 351 RGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSPCSLY 410
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
F+++SHDRTAR+WS R PLR+ AGHLSDVDCV++H N NYIATGS+DKTVRLW G
Sbjct: 411 FSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQG 470
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY 597
VR+F GHR +L+LA SP+G+Y+AS ED + +WDLASG L GHT + +L++
Sbjct: 471 ASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSF 530
Query: 598 SCEGSLLASGSADCTVKLWDV 618
S + SL+AS S D TV++WD+
Sbjct: 531 SQDSSLVASASMDNTVRVWDI 551
Score = 286 (105.7 bits), Expect = 6.2e-22, P = 6.2e-22
Identities = 62/182 (34%), Positives = 96/182 (52%)
Query: 412 RSYT---LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
+S+T LY+GH+ PV+ SP + ++S D T RLWS L Y GH V
Sbjct: 384 KSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDC 443
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
V+F+P +Y A+ S D+T R+WS + +R+ GH V + + N Y+A+ D+
Sbjct: 444 VKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQR 503
Query: 529 VRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
++LWD++SG + GH I SL+ S D +AS D T+ +WD+ + P G
Sbjct: 504 LKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIRNAHGSAPTDGC 563
Query: 589 TS 590
+S
Sbjct: 564 SS 565
Score = 286 (105.7 bits), Expect = 6.2e-22, P = 6.2e-22
Identities = 116/566 (20%), Positives = 230/566 (40%)
Query: 5 QVVEFVATYLKKKGFSEAENALQAEIQRNKSSNNTNPIDILNDPELSKFFRTFSESEDGP 64
Q+ V YLK++ + + + +++ + + + + + D P
Sbjct: 8 QIQYAVTQYLKRRQYIDTDGSMKGAKLSQTAEEMAASLTVQTESSCANVVSAAPCQAD-P 66
Query: 65 ARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVA---KGHIQEARTFFNN-F 120
+Y++++S+LRS+ + E VL+P+F++ + + KG + + F++ F
Sbjct: 67 QQYENQFSRLRSFLQEAEGPLVKEASSVLFPLFLYLHLHMARCGLKGALDSFYSRFHSLF 126
Query: 121 REDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQST 180
++D E + DL L G L+ + +L K + + +Y LL+YL ++
Sbjct: 127 QQDPEQKAIVDL--LRGALTLQDVTTNPKLCALLDHKYVVHLTDQAYSYLLRYLQSEDNS 184
Query: 181 KMLGIINERINFQVSPGQPSSISDDAEIVTLIGSNQDAANQINQKEVHWGLLEDSL-ENR 239
+ ++ + +V+ Q + L G+ N + W ++ S R
Sbjct: 185 AICWVLTAHLQVEVTAAQRTDYQ-------LYGAGVGTGNTSSSSSSTWASVDGSEGAER 237
Query: 240 LEKTGLISDSEKAEGENKEAEIDENKKRP----------VEGGKQGASIKKLKKDKAI-- 287
LE + +E A EN + I ++ P + +Q + ++ D +
Sbjct: 238 LEVPAGLPQNEAAL-ENLQDCIKRVREGPPSLTTVCFYAFQHTEQLLNTAEVSADSRLLA 296
Query: 288 ----NATAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLSSAALPSVS 343
N+ K L A + P K D V + +LE+ + S + + +
Sbjct: 297 AGFDNSAVKLWSLRARKLKAGPH-KAD----VSKIRLACDVLEEEADDEDASGSEIKT-- 349
Query: 344 FYTFINTHNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQ---GENDTT 399
+ H+G + + D S + DS+++ WD+ + G + D +
Sbjct: 350 ----LRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVS 405
Query: 400 P-----------REDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLW 448
P R + R LY GH V F P ++I + S D T+RLW
Sbjct: 406 PCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLW 465
Query: 449 STKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDV 508
ST+ A++ + GH PV + F+P G Y AS+ D+ ++W + + + GH +
Sbjct: 466 STRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTI 525
Query: 509 DCVRWHINCNYIATGSSDKTVRLWDV 534
+ + + + +A+ S D TVR+WD+
Sbjct: 526 SSLSFSQDSSLVASASMDNTVRVWDI 551
Score = 235 (87.8 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 53/165 (32%), Positives = 78/165 (47%)
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN--- 516
+GH+ PV+ F S S D T R W + + GH V W ++
Sbjct: 351 RGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPV----WDVDVSP 406
Query: 517 CN-YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWD 575
C+ Y +T S D+T RLW + +R++ GH S + + P+ Y+A+G D T+ +W
Sbjct: 407 CSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWS 466
Query: 576 LASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
G V GH V TLA+S G LAS D +KLWD+ +
Sbjct: 467 TRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLAS 511
Score = 140 (54.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 33/127 (25%), Positives = 57/127 (44%)
Query: 498 LRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSP 557
++ + GH V + + + + + S D TVR WD+ S ++ GH + + +SP
Sbjct: 347 IKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSP 406
Query: 558 DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
Y ++ D T +W A + GH S V + + + +A+GS D TV+LW
Sbjct: 407 CSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWS 466
Query: 618 VTTSTKV 624
V
Sbjct: 467 TRQGASV 473
>ASPGD|ASPL0000054735 [details] [associations]
symbol:AN0292 species:162425 "Emericella nidulans"
[GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 HOGENOM:HOG000212424 ProteinModelPortal:C8VUA4
EnsemblFungi:CADANIAT00002423 OMA:GGIWSLS Uniprot:C8VUA4
Length = 606
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 186/543 (34%), Positives = 274/543 (50%)
Query: 104 LVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKIC 163
+V + EAR FF+ + H D++ LE + P H+++ A R +K + +
Sbjct: 1 MVTSLYTPEARQFFDGNKNLFLPEHTEDVRALEPISLPEHVQDNSIAKLYRGNKYRLVLS 60
Query: 164 QYSYELLLQYLHKTQS---TKMLGIINERINFQVSPGQPSSISDDAEIVTLIGSNQDAAN 220
++ L+Q+L Q + M I++ A +++ G Q
Sbjct: 61 NPAFGSLMQFLESKQKEGGSVMSAILSSYCTIITKERAADDRFSFAALLSQAGMGQSFPT 120
Query: 221 QINQKEVHW-GLL----EDSLENRLEKTGL--ISDSEKAEGENKEAEIDENKKRPVEGGK 273
+ H G ++ L + L +S + EG+ + DE+ K P G
Sbjct: 121 EDEGIPGHHPGSAYTGDNPAMAGTLPRLRLAKLSMEQALEGDVRAELADEDAKNP-PGPG 179
Query: 274 QGASIKKLKKDKAINATAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRNRVH 333
Q + ++L D+ I K EA T + P P A V EV Q + E+ R+R
Sbjct: 180 QNSLTQEL--DQMIK---KEEDDEAPTRADIP-YPPSTARDVA-IEV-QKVKEN-RDRFR 230
Query: 334 LSS---AALPSVS--FYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAV 388
+ S P+VS +TF NT++G+NC S D LVA G +S ++VW + G++
Sbjct: 231 IESRTGGVGPAVSVCMFTFHNTYDGINCLDFSDDNLLVAAGMQESYIRVWSLD--GKKIP 288
Query: 389 SSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGD------------FI 436
S E T R I GHSGPVY+ +F+P ++
Sbjct: 289 SDDSADEPPTNSRRLI--------------GHSGPVYAVAFAPSATPSENAVAPTNARWL 334
Query: 437 LSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQ 496
LSSSAD TIRLWS L +V YKGH+ PVWD+Q+ P GHYF S HD+TAR+W D I+
Sbjct: 335 LSSSADRTIRLWSLDLWQCMVVYKGHDQPVWDLQWGPFGHYFVSGGHDKTARLWVTDHIR 394
Query: 497 PLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMS 556
RI GH DVDCV +H N Y+ TGSSD+TVR+W V++G VR+F GH I +LA S
Sbjct: 395 QQRIFVGHEQDVDCVCFHPNSAYVFTGSSDRTVRMWAVTTGNAVRMFTGHTGNITALACS 454
Query: 557 PDGRYMASGDEDGTIMMWDLASGRCVTPLMGH-TSCVWTLAYSCEGSLLASGSADCTVKL 615
DG+ +AS D+ G+I++WDL GR + + GH +W+L++S E ++L SG AD TV++
Sbjct: 455 RDGKTLASADDHGSILLWDLGPGRLLKRMRGHGKGGIWSLSWSVESNVLVSGGADGTVRV 514
Query: 616 WDV 618
WDV
Sbjct: 515 WDV 517
Score = 257 (95.5 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 64/239 (26%), Positives = 107/239 (44%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQG 475
+Y+GH PV+ + P G + +S D T RLW T + GH V V F+P
Sbjct: 356 VYKGHDQPVWDLQWGPFGHYFVSGGHDKTARLWVTDHIRQQRIFVGHEQDVDCVCFHPNS 415
Query: 476 HYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS 535
Y + S DRT R+W++ +R+ GH ++ + + +A+ ++ LWD+
Sbjct: 416 AYVFTGSSDRTVRMWAVTTGNAVRMFTGHTGNITALACSRDGKTLASADDHGSILLWDLG 475
Query: 536 SGECVRIFIGH-RSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
G ++ GH + I SL+ S + + SG DGT+ +WD+ G P G +
Sbjct: 476 PGRLLKRMRGHGKGGIWSLSWSVESNVLVSGGADGTVRVWDVM-GPAHDPSQGRVAGEGG 534
Query: 595 LAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQ 653
+G+ +S +A+ T V K + K + PTK +PVY ++
Sbjct: 535 AGTKIDGA--SSAAANSTQTPGTVGPGMGSGKKKGKDVVVTPDQISAFPTKKSPVYKVK 591
Score = 167 (63.8 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 33/109 (30%), Positives = 55/109 (50%)
Query: 516 NCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWD 575
N ++ + S+D+T+RLW + +C+ ++ GH + L P G Y SG D T +W
Sbjct: 330 NARWLLSSSADRTIRLWSLDLWQCMVVYKGHDQPVWDLQWGPFGHYFVSGGHDKTARLWV 389
Query: 576 LASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
R +GH V + + + + +GS+D TV++W VTT V
Sbjct: 390 TDHIRQQRIFVGHEQDVDCVCFHPNSAYVFTGSSDRTVRMWAVTTGNAV 438
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 144/342 (42%), Positives = 201/342 (58%)
Query: 282 KKDKAINATAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLSSAALPS 341
+ D + A+ +SR E+N + + ++ ++ E +L+D RV +L +
Sbjct: 204 RTDYQLYASGSSSRNESNGLEPS-----EVPASILQNEAALELLQDSIKRVKDGPPSLTT 258
Query: 342 VSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMA--KLGQQA--VS-SGLQGEN 396
+ FY F NT LN A IS + L+A GF +S +K+W + KL + V S ++
Sbjct: 259 ICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRSKKLKSEPHLVDVSRIRLAC 318
Query: 397 DTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANL 456
D E+ + L +GH GPVYS F +LS S D +IR W + N
Sbjct: 319 DILDEEEEEDDSAGTEMKIL-RGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNT 377
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN 516
V Y+GH YPVWD+ +P YFAS+SHDRTAR+WS DR PLRI AGHL DVDCV++H N
Sbjct: 378 VLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPN 437
Query: 517 CNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
NY+ATGS+DKTVRLW G VR+F GHR +L+LA SP+G+Y+AS ED + +WDL
Sbjct: 438 SNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDL 497
Query: 577 ASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
ASG L GHT + +L +S + SL+AS S D +V++WD+
Sbjct: 498 ASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539
Score = 315 (115.9 bits), Expect = 2.8e-25, P = 2.8e-25
Identities = 66/182 (36%), Positives = 97/182 (53%)
Query: 412 RSYT---LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
RS+T LYQGH+ PV+ SP + S+S D T RLWS L Y GH V
Sbjct: 372 RSFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDC 431
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
V+F+P +Y A+ S D+T R+WS + +R+ GH V + + N Y+A+ D+
Sbjct: 432 VKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQR 491
Query: 529 VRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
++LWD++SG + GH I SL SPD +AS D ++ +WD+ + C P G
Sbjct: 492 LKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCNAPADGS 551
Query: 589 TS 590
+S
Sbjct: 552 SS 553
Score = 305 (112.4 bits), Expect = 3.7e-24, P = 3.7e-24
Identities = 124/559 (22%), Positives = 249/559 (44%)
Query: 5 QVVEFVATYLKKKGFSEAENALQAEIQRNKSSNNTNP-IDILNDPELSKFFRTFSESEDG 63
Q+ V+ YLK++ + ++E L+ ++ +++ + + ++ + +
Sbjct: 8 QIQMAVSCYLKRRQYVDSEGPLKQGLRLCQTAEEMAANLTVQSESGCANVVSA-APCLPE 66
Query: 64 PARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFRED 123
P +Y+ ++ +LR++ S + HE++ +LYP+F++ +++V G +F++ F
Sbjct: 67 PQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFYSRF--- 123
Query: 124 HEMMHLRDLQK--LEGVLSPSHLEEMEFAHSLR---HSKVNIKICQYSYELLLQYLHKTQ 178
H M QK +E + + ++++ LR +K I++ + SY LL+YL
Sbjct: 124 HGMFLQNASQKDIIEQLQTTMTIQDILSNLKLRAFLDNKYVIRLQEDSYNYLLRYLQSDN 183
Query: 179 STKMLGIINERINFQVSPGQPSSISDDAEIVTLIGSNQDAANQINQKEVHWGLLEDSLEN 238
+ + ++ I+ V P + + D ++ S+++ +N + EV +L++ E
Sbjct: 184 NNALCKVLTLHIHLDVQPSKRT----DYQLYASGSSSRNESNGLEPSEVPASILQN--EA 237
Query: 239 RLEKTGLISDSEKA--EGENKEAEIDENKKRPVEGGKQGASIKKLKKDKAI---NATAKT 293
LE L+ DS K +G I E A I K A N+ K
Sbjct: 238 ALE---LLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKL 294
Query: 294 SRLEANTVSTAPRV----KPDLALPVMPTEVEQSILEDLRNRVHLSSAALPSVSFYTFIN 349
L + + + P + + LA ++ E E+ ++ L P S F++
Sbjct: 295 WSLRSKKLKSEPHLVDVSRIRLACDILDEEEEEDDSAGTEMKI-LRGHCGPVYST-RFLS 352
Query: 350 THNGLNCASISQDGSLV---AGGFSDSSL------KVWDMAKLGQQAVSSGLQGENDTTP 400
+GL S S+D S+ F+++ L VWD+ + ++ +D T
Sbjct: 353 DSSGL--LSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDL-DISPCSLYFA-SASHDRTA 408
Query: 401 REDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
R + R +Y GH V F P +++ + S D T+RLWST+ ++ +
Sbjct: 409 R---LWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFT 465
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH PV + F+P G Y AS+ D+ ++W + + + GH ++ + + + + I
Sbjct: 466 GHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLI 525
Query: 521 ATGSSDKTVRLWDVSSGEC 539
A+ S D +VR+WD+ + C
Sbjct: 526 ASASMDNSVRVWDIRNTYC 544
Score = 236 (88.1 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 59/191 (30%), Positives = 86/191 (45%)
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN--- 516
+GH PV+ +F S S D + R W + + GH V W ++
Sbjct: 339 RGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPV----WDLDISP 394
Query: 517 CN-YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWD 575
C+ Y A+ S D+T RLW +RI+ GH + + P+ Y+A+G D T+ +W
Sbjct: 395 CSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWS 454
Query: 576 LASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNR 635
G V GH V LA+S G LAS D +KLWD+ + T L E + T+
Sbjct: 455 TQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGT--LYKELRGHTDN 512
Query: 636 LRSLKTLPTKS 646
+ SL P S
Sbjct: 513 ITSLTFSPDSS 523
Score = 144 (55.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 35/127 (27%), Positives = 57/127 (44%)
Query: 498 LRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSP 557
++I+ GH V R+ + + + + S D ++R WD+ S ++ GH + L +SP
Sbjct: 335 MKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISP 394
Query: 558 DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
Y AS D T +W + GH V + + + LA+GS D TV+LW
Sbjct: 395 CSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWS 454
Query: 618 VTTSTKV 624
V
Sbjct: 455 TQQGNSV 461
>WB|WBGene00006386 [details] [associations]
symbol:taf-5 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0032940 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000910 GO:GO:0001703
EMBL:Z81073 GeneTree:ENSGT00700000104377 KO:K03130 OMA:CATISED
EMBL:Z83122 PIR:T21580 RefSeq:NP_492169.2 ProteinModelPortal:G5EF68
SMR:G5EF68 EnsemblMetazoa:F30F8.8.1 EnsemblMetazoa:F30F8.8.2
EnsemblMetazoa:F30F8.8.3 GeneID:172552 KEGG:cel:CELE_F30F8.8
CTD:172552 WormBase:F30F8.8 NextBio:876007 Uniprot:G5EF68
Length = 648
Score = 513 (185.6 bits), Expect = 6.9e-59, Sum P(2) = 6.9e-59
Identities = 114/309 (36%), Positives = 168/309 (54%)
Query: 319 EVEQSILEDLRNRVHLSSAALPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSL--K 376
E ++ L D+ +S+ + S+ YT +N G+ + D SL+A G SDSS+
Sbjct: 287 EERRNWLRDVGKMAIISAESPVSICMYTTVNAPIGVASCDFTDDSSLIAMGLSDSSIVMN 346
Query: 377 VWD----MAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPL 432
D M KL + E + + G S Y GH GPV+S +FSP
Sbjct: 347 AMDPMNKMKKLRDMEFLDKIDIETADNVQSQMFDLQGSTTSVR-YTGHGGPVFSVNFSPD 405
Query: 433 GDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSM 492
++SS+ D T+RLWS + N V Y+ VW QF +G+YFA++S D+TA +WS
Sbjct: 406 RRLLISSAGDRTVRLWSMETQRNAVIYRTPAV-VWQAQFCSRGYYFATASADKTAAMWST 464
Query: 493 DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILS 552
DR+ PLRI A DV C+ +H NCNYIA GS D+ VR+WDV SG VRIF GH++ I++
Sbjct: 465 DRMHPLRIFADPYGDVGCIDYHPNCNYIAGGSDDRYVRVWDVCSGTRVRIFSGHKASIIA 524
Query: 553 LAMSPDGRYMASGDEDGTIMMWDLASGRCVTP-LMGHTSCVWTLAYSCEGSLLASGSADC 611
+ SP GRY+ S D G +M+WDLA R V + ++ +S +G + A +
Sbjct: 525 VKFSPCGRYIVSLDAIGNLMIWDLAYQRLVAAEITEQAGTKGSITFSRDGGVFAVSHGNS 584
Query: 612 TVKLWDVTT 620
+++L+ + T
Sbjct: 585 SIQLYSLDT 593
Score = 109 (43.4 bits), Expect = 6.9e-59, Sum P(2) = 6.9e-59
Identities = 41/189 (21%), Positives = 85/189 (44%)
Query: 83 DLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPS 142
D+ + E +L+P+F H ++ L+ K H AR FFN F+ + +L +
Sbjct: 97 DVVQAEFSQLLFPIFAHSYIALIEK-HAATARIFFNRFKIFIPECFSEFVYQLSLIEDAM 155
Query: 143 HLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQSTKMLGIINERINFQVSPGQPSSI 202
L E H LR +K +++ + + L++L Q T+++G+ N I + +
Sbjct: 156 TLRANEHVHILRENKFLVRLSRPT----LKHLESIQ-TRVIGVKNI-IAKHICIENADEV 209
Query: 203 SDD-AEIVTLIGSNQDAANQINQK-EVHWGLLEDSLENRLEKTGLISDSEKAEGENKEAE 260
S + I T +G ++ +++ ++ + +L+D L +EK K G+ +
Sbjct: 210 STNRTTIETQMGGILGVTSKSDKRHKMMFSVLKDELMQNIEKRKTKGKDWKDMGKKMQTH 269
Query: 261 IDENKKRPV 269
+ + P+
Sbjct: 270 CPQADRIPL 278
Score = 104 (41.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 32/125 (25%), Positives = 53/125 (42%)
Query: 503 GHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYM 562
GH V V + + + + + D+TVRLW + + I+ +++ G Y
Sbjct: 392 GHGGPVFSVNFSPDRRLLISSAGDRTVRLWSMETQRNAVIY-RTPAVVWQAQFCSRGYYF 450
Query: 563 ASGDEDGTIMMWD---LASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVT 619
A+ D T MW + R G C+ Y + +A GS D V++WDV
Sbjct: 451 ATASADKTAAMWSTDRMHPLRIFADPYGDVGCI---DYHPNCNYIAGGSDDRYVRVWDVC 507
Query: 620 TSTKV 624
+ T+V
Sbjct: 508 SGTRV 512
Score = 75 (31.5 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 19/89 (21%), Positives = 38/89 (42%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPV-WDVQFNPQ 474
++ GH + + FSP G +I+S A + +W + + F+
Sbjct: 514 IFSGHKASIIAVKFSPCGRYIVSLDAIGNLMIWDLAYQRLVAAEITEQAGTKGSITFSRD 573
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAG 503
G FA S + + +++S+D + + AG
Sbjct: 574 GGVFAVSHGNSSIQLYSLDTLIGTVLAAG 602
Score = 68 (29.0 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 7 VEFVATYLKKKGFSEAENALQAE---IQRNKSSNNTNPIDILNDPELSKFFRTFSE-SED 62
++ + YL++ G +E E L E + R + SN P + +S F TF + + D
Sbjct: 40 LQMIIGYLRRNGLTETEELLTREAGPVLRVEGSNGLPP-----EEAISVEFDTFVQHAND 94
Query: 63 GPARYQDEYSKLRS--WTYSSLDLY-KH----ELLHVLYPVFI-HCFMDLVAK-GHIQEA 113
Q E+S+L + +S + L KH + + +FI CF + V + I++A
Sbjct: 95 CTDVVQAEFSQLLFPIFAHSYIALIEKHAATARIFFNRFKIFIPECFSEFVYQLSLIEDA 154
Query: 114 RTFFNNFREDHEMMH-LRDLQKLEGVLSPS--HLEEME 148
T N E +H LR+ + L + P+ HLE ++
Sbjct: 155 MTLRAN-----EHVHILRENKFLVRLSRPTLKHLESIQ 187
>FB|FBgn0011569 [details] [associations]
symbol:can "cannonball" species:7227 "Drosophila
melanogaster" [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0007141 "male meiosis I" evidence=IMP] [GO:0048515 "spermatid
differentiation" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0005669 "transcription factor TFIID
complex" evidence=ISS] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=ISS]
[GO:0007126 "meiosis" evidence=TAS] [GO:0007286 "spermatid
development" evidence=IMP;TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0001673
"male germ cell nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0005730 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007286 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001673 GO:GO:0006367 GO:GO:0010468
GO:GO:0007141 HSSP:P16649 GO:GO:0005669
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:AF346730
RefSeq:NP_524827.1 UniGene:Dm.1796 SMR:Q9VT91 IntAct:Q9VT91
MINT:MINT-834439 STRING:Q9VT91 EnsemblMetazoa:FBtr0076299
GeneID:45432 KEGG:dme:Dmel_CG6577 UCSC:CG6577-RA CTD:12329
FlyBase:FBgn0011569 InParanoid:Q9VT91 OMA:RIWDIVK OrthoDB:EOG4F4QS8
GenomeRNAi:45432 NextBio:838153 Uniprot:Q9VT91
Length = 942
Score = 497 (180.0 bits), Expect = 6.2e-54, Sum P(2) = 6.2e-54
Identities = 125/347 (36%), Positives = 187/347 (53%)
Query: 327 DLRNRVHLSSAALPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDM--AKLG 384
D + R+ L LPS YT + + CA+ S+ S++A G S + V+ + +KL
Sbjct: 529 DEQYRMKLDRNNLPSTYLYTTSPSDEVVICATFSEGNSMLALGTVSSKVYVFSLKPSKLV 588
Query: 385 QQAVSSGLQGENDTTPR---EDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSA 441
Q + L+ DT +D+I P + TLY GH GPVY SF+P F+++ S
Sbjct: 589 QVKAAQWLKNL-DTGMAGVDKDMIDPIKKFTRRTLY-GHQGPVYGCSFNPEDRFLITCSE 646
Query: 442 DTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIM 501
D ++RLW + +V + GH PV V F P+G+YFA++S D TAR+W D +P RI+
Sbjct: 647 DFSVRLWCLLSWSCVVIFSGHLAPVCFVVFAPRGYYFATASDDCTARVWMQDNTKPARIL 706
Query: 502 AGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRY 561
GHL+++ +H N +Y+ATGS+D TVR+WD+ VRIF GH+S I +L S GRY
Sbjct: 707 QGHLAELGVCLFHPNRHYMATGSADCTVRIWDIVKAVQVRIFRGHKSRITALIYSICGRY 766
Query: 562 MASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVT-- 619
+ SG +D IM+WD A+ + H + + T+ S + ++L G DC + LWD
Sbjct: 767 LVSGGDDNLIMIWDTANEILMQFFDHHKASINTMEISLDNNILVVGGQDCQLTLWDFEQV 826
Query: 620 -----TSTKV-LK----TEEKSGTNRLRSLKTLPTKSTPVYSLQVLR 656
K+ +K T+E S N L S + TK P Y ++ R
Sbjct: 827 IKNYLNRAKISMKNQAGTQESSANNLLVS--SFFTKGEPFYMIRFTR 871
Score = 95 (38.5 bits), Expect = 6.2e-54, Sum P(2) = 6.2e-54
Identities = 32/135 (23%), Positives = 64/135 (47%)
Query: 65 ARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDH 124
A Y+ KL S+ YK+E+ +LYP+ + ++ ++A IQ+AR F++
Sbjct: 321 ADYEFAVKKLIKLIQSTPSHYKYEIYILLYPLLVLTYLQMMASDKIQKARMLLVRFQDHL 380
Query: 125 EMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSY-ELLL--QYLHKTQSTK 181
+ ++ + KL + P+ + KV I++ + ++ +LLL + + Q K
Sbjct: 381 DDSYISRIIKLREISKPAEVPNKARKLLAGLEKVKIEMSEGAFRQLLLCTEEWTRGQQEK 440
Query: 182 MLGIINERINFQVSP 196
+L +FQ+ P
Sbjct: 441 LLS------HFQIQP 449
Score = 42 (19.8 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
Identities = 9/33 (27%), Positives = 21/33 (63%)
Query: 245 LISDSEKAEGE---NKEAEIDENKKRPVEGGKQ 274
+ISDS+ ++ + N+ ++++NK +P +Q
Sbjct: 17 VISDSDDSDSDDIRNELMKLEDNKDKPKNKERQ 49
Score = 40 (19.1 bits), Expect = 3.8e-48, Sum P(2) = 3.8e-48
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 247 SDSEKAEGENKEAEIDENKKRPVEGGK 273
+D ++ ENK +E RPV+ G+
Sbjct: 232 TDLDEQHNENKCTYWEEMSLRPVDKGE 258
>FB|FBgn0039067 [details] [associations]
symbol:wda "will decrease acetylation" species:7227
"Drosophila melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043970 "histone H3-K9
acetylation" evidence=IMP] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0000124
GeneTree:ENSGT00700000104377 KO:K03130 HSSP:Q02793 EMBL:AY118904
RefSeq:NP_651136.1 UniGene:Dm.13737 SMR:Q9VCN9 STRING:Q9VCN9
EnsemblMetazoa:FBtr0084387 GeneID:42750 KEGG:dme:Dmel_CG4448
UCSC:CG4448-RA CTD:42750 FlyBase:FBgn0039067 InParanoid:Q9VCN9
OMA:LWCATSG OrthoDB:EOG49W0WQ GenomeRNAi:42750 NextBio:830376
Uniprot:Q9VCN9
Length = 743
Score = 406 (148.0 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 80/204 (39%), Positives = 123/204 (60%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVC---YKGHNYPVWDVQFNPQ 474
+GH+ V FS + S S D T+R W NL C Y+ HNYP+W + +P
Sbjct: 494 RGHTKGVTDVRFSAHYPLMYSVSKDATMRCWRAH---NLHCAAIYRSHNYPIWCLDESPV 550
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDV 534
G Y + S D +AR+WS+++ L I AGH DV+CV +H N NYIATGS+D +VRLW
Sbjct: 551 GQYVVTGSKDLSARLWSLEKEHALIIYAGHTQDVECVAFHPNGNYIATGSADHSVRLWCA 610
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+SG+ +R+F R + LA SPDG+ +A+ E+ + ++DLA+G + L H++ + +
Sbjct: 611 TSGKLMRVFADCRQAVTQLAFSPDGKMLAAAGEETKVRIFDLAAGAQLAELKDHSASISS 670
Query: 595 LAYSCEGSLLASGSADCTVKLWDV 618
L++S LA+ +D T++LWD+
Sbjct: 671 LSWSTHNRHLATACSDGTLRLWDI 694
Score = 244 (91.0 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 54/207 (26%), Positives = 106/207 (51%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQG 475
+Y+ H+ P++ SP+G ++++ S D + RLWS + L+ Y GH V V F+P G
Sbjct: 534 IYRSHNYPIWCLDESPVGQYVVTGSKDLSARLWSLEKEHALIIYAGHTQDVECVAFHPNG 593
Query: 476 HYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS 535
+Y A+ S D + R+W + +R+ A V + + + +A + VR++D++
Sbjct: 594 NYIATGSADHSVRLWCATSGKLMRVFADCRQAVTQLAFSPDGKMLAAAGEETKVRIFDLA 653
Query: 536 SGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTL 595
+G + H + I SL+ S R++A+ DGT+ +WD+ ++P+ ++S +
Sbjct: 654 AGAQLAELKDHSASISSLSWSTHNRHLATACSDGTLRLWDIKK---LSPMSDNSSAGSSS 710
Query: 596 AYSCEGSLLASGSADCTVKLWDVTTST 622
+ + L + S V ++ T+ T
Sbjct: 711 SATTNRVLTVNSSCQRLVDVFYGTSKT 737
Score = 216 (81.1 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 46/174 (26%), Positives = 82/174 (47%)
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
+GH V DV+F+ S S D T R W + I H + C+ Y
Sbjct: 494 RGHTKGVTDVRFSAHYPLMYSVSKDATMRCWRAHNLHCAAIYRSHNYPIWCLDESPVGQY 553
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
+ TGS D + RLW + + I+ GH + +A P+G Y+A+G D ++ +W SG
Sbjct: 554 VVTGSKDLSARLWSLEKEHALIIYAGHTQDVECVAFHPNGNYIATGSADHSVRLWCATSG 613
Query: 580 RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGT 633
+ + V LA+S +G +LA+ + V+++D+ ++ + ++ S +
Sbjct: 614 KLMRVFADCRQAVTQLAFSPDGKMLAAAGEETKVRIFDLAAGAQLAELKDHSAS 667
Score = 175 (66.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 40/126 (31%), Positives = 65/126 (51%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
+ GH V VR+ + + + S D T+R W + C I+ H I L SP G+
Sbjct: 493 LRGHTKGVTDVRFSAHYPLMYSVSKDATMRCWRAHNLHCAAIYRSHNYPIWCLDESPVGQ 552
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
Y+ +G +D + +W L + GHT V +A+ G+ +A+GSAD +V+LW T
Sbjct: 553 YVVTGSKDLSARLWSLEKEHALIIYAGHTQDVECVAFHPNGNYIATGSADHSVRLW-CAT 611
Query: 621 STKVLK 626
S K+++
Sbjct: 612 SGKLMR 617
Score = 175 (66.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 47/186 (25%), Positives = 86/186 (46%)
Query: 351 HNGLNCASISQDGSLVAGGFSDSSLKVW--DMAKLGQQAVSSGLQGENDTTPREDIIGPN 408
HN L+CA+I + + +W D + +GQ V+ G D + R +
Sbjct: 527 HN-LHCAAI----------YRSHNYPIWCLDESPVGQYVVT----GSKDLSAR---LWSL 568
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
++ + +Y GH+ V +F P G++I + SAD ++RLW + + V
Sbjct: 569 EKEHALIIYAGHTQDVECVAFHPNGNYIATGSADHSVRLWCATSGKLMRVFADCRQAVTQ 628
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
+ F+P G A++ + RI+ + L + H + + + W + ++AT SD T
Sbjct: 629 LAFSPDGKMLAAAGEETKVRIFDLAAGAQLAELKDHSASISSLSWSTHNRHLATACSDGT 688
Query: 529 VRLWDV 534
+RLWD+
Sbjct: 689 LRLWDI 694
Score = 48 (22.0 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 28/142 (19%), Positives = 55/142 (38%)
Query: 244 GLISDSEKAEGEN---KEAEIDENKKRPVEGGKQGASIKKLKKD-KAINATAKTS-RLEA 298
GL D E +GE+ + + N + + K K+ + N +T + E
Sbjct: 286 GLTDDLEGEDGEDDVVSKPAVTLNTRGDIRPSKSLTEKSNRKRPAEEPNIMLETDIKQEV 345
Query: 299 NTVSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLSSAALPSVSFYTFINTHNGLNCAS 358
T +A K L + ++ + + L+++V L P F GL A
Sbjct: 346 ETDESAELSKLQLNIDACLDTLKSATEQILKSQVEL-----PR--FLRISERSRGLTSAH 398
Query: 359 ISQDGSLVAGGFSDSSLKVWDM 380
+ + GF +S++++W +
Sbjct: 399 LDPSECHMLAGFDNSAVQLWQL 420
Score = 40 (19.1 bits), Expect = 7.1e-35, Sum P(2) = 7.1e-35
Identities = 29/164 (17%), Positives = 61/164 (37%)
Query: 123 DHEMMH-LRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQSTK 181
D E+ + +R +Q L G E + R SK + + YL +
Sbjct: 199 DTELDYFMRLVQTLSGYTRLEAAESDDTVAHFRSSKYELHTTAVVVNRICAYLQRRGHVL 258
Query: 182 MLGIINERINFQVSPGQPSSISDDAEIVTLIGSNQDAANQINQKEVHWG---LLEDSLEN 238
++ ++ ++ + + + S+D L+G D + + +V L +
Sbjct: 259 IMNLLYTWLHVHIVENEQRAFSEDH----LLGLTDDLEGEDGEDDVVSKPAVTLNTRGDI 314
Query: 239 RLEKTGLISDSEKAEGENKEAEIDENKKRPVEGGKQGASIKKLK 282
R K+ + K E ++ + K+ VE + A + KL+
Sbjct: 315 RPSKSLTEKSNRKRPAEEPNIMLETDIKQEVETD-ESAELSKLQ 357
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 347 (127.2 bits), Expect = 3.9e-33, Sum P(2) = 3.9e-33
Identities = 95/290 (32%), Positives = 147/290 (50%)
Query: 354 LNCASISQDGSLVAGGFSDSSLKVWDMAKLG-QQAV---SSGLQ-------------GEN 396
+ + S DG L+A G +D+++K+WD A G +Q + SS +Q G +
Sbjct: 44 IETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGSS 103
Query: 397 DTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANL 456
DTT + + +T+ +GHS V S +FSP G +LW+ + +
Sbjct: 104 DTTIK--LWNSASDSLKHTM-EGHSDRVESVAFSPNG------------QLWNPAIGSLK 148
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN 516
+GH+ V V F+P G AS S ++T ++W + GH + V + + +
Sbjct: 149 HTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPD 208
Query: 517 CNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
+A+GS+D T++LWD SG GH + I SLA SP+G+ +ASG D TI +WD
Sbjct: 209 GRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDT 268
Query: 577 ASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLK 626
A+G L GH+ V ++ +S + LL SGS D T+KLWD T +LK
Sbjct: 269 ATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATG--ILK 316
Score = 339 (124.4 bits), Expect = 3.0e-32, Sum P(2) = 3.0e-32
Identities = 81/273 (29%), Positives = 138/273 (50%)
Query: 352 NGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDI-IGPNGR 410
+ + + S +G L+A G SD+++K+W+ A ++ ++G +D E + PNG+
Sbjct: 84 SSVQSVAFSPNGQLLASGSSDTTIKLWNSAS---DSLKHTMEGHSDRV--ESVAFSPNGQ 138
Query: 411 -------KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHN 463
+T+ +GHS V S +FSP G + S SA+ TI+LW + GH+
Sbjct: 139 LWNPAIGSLKHTI-EGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHS 197
Query: 464 YPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATG 523
V + F+P G AS S+D T ++W + GH + ++ + + N +A+G
Sbjct: 198 NWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASG 257
Query: 524 SSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVT 583
SSD T++LWD ++G GH M+LS+ SPD + + SG D TI +WD A+G +
Sbjct: 258 SSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATG-ILK 316
Query: 584 PLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
M V ++ +S E L + +++ W
Sbjct: 317 HSMRTPGIVRSIEFSIELPQLITNLGTFSIQAW 349
Score = 323 (118.8 bits), Expect = 1.8e-30, Sum P(2) = 1.8e-30
Identities = 80/226 (35%), Positives = 115/226 (50%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GHS + + +FSP G + S S DTTI+LW +GH+ V V F+P G
Sbjct: 38 EGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQL 97
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
AS S D T ++W+ M GH V+ V + N G +LW+ + G
Sbjct: 98 LASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPN------G------QLWNPAIG 145
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY 597
GH +LS+A SPDG+ +ASG + TI +WD A+ L GH++ V L +
Sbjct: 146 SLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVF 205
Query: 598 SCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLP 643
S +G LLASGS D T+KLWD + + LK + +N++ SL P
Sbjct: 206 SPDGRLLASGSNDATIKLWDPPSGS--LKHTLEGHSNKIESLAFSP 249
Score = 189 (71.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 42/119 (35%), Positives = 69/119 (57%)
Query: 498 LRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSP 557
L+ + GH ++ V + + +A+GS+D T++LWD +SG + GH S + S+A SP
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSP 93
Query: 558 DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLL--ASGSADCTVK 614
+G+ +ASG D TI +W+ AS + GH+ V ++A+S G L A GS T++
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIE 152
Score = 44 (20.5 bits), Expect = 3.9e-33, Sum P(2) = 3.9e-33
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 24 NALQAEIQRNKSSNNTNPIDILNDPELSKFFRTFSESEDG 63
N LQ+ +QR K +N P ++ S + T + S DG
Sbjct: 15 NTLQSTLQRPKVEDNWGP-ELQTLEGHSDWIETVTFSPDG 53
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 402 (146.6 bits), Expect = 6.0e-33, Sum P(2) = 6.0e-33
Identities = 101/312 (32%), Positives = 164/312 (52%)
Query: 348 INTHN-GLNCASISQDGSLVAGGFSDSSLKVWDMAKLG--QQAVS--SGLQGENDTTPRE 402
+++H+ + + S DG L+A DS++KVW+ A G QQ++ SG +P
Sbjct: 872 LDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPAT-GELQQSLEGRSGWVKSVAFSPDG 930
Query: 403 DIIGPNGRKRSYTLY-----------QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTK 451
+ K + L+ +GHS V S +FSP G + SSS+DTTI+LW++
Sbjct: 931 KKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNST 990
Query: 452 LNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCV 511
+KGH+ + V F+P G + S S D T ++W + + + + H V V
Sbjct: 991 TGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAV 1050
Query: 512 RWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTI 571
+ + +A+ S D T++LWD ++GE R GH + S+ SPDG+ +AS DGTI
Sbjct: 1051 AFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTI 1110
Query: 572 MMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKS 631
+W+ +G L G + V ++A+S +G LASG D T+KLWD T ++L+T E
Sbjct: 1111 KLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATG-ELLQTLE-G 1168
Query: 632 GTNRLRSLKTLP 643
++R++S+ P
Sbjct: 1169 HSDRIQSVVFSP 1180
Score = 382 (139.5 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 86/237 (36%), Positives = 130/237 (54%)
Query: 384 GQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADT 443
G+Q VS G D T + I P + TL GHSG V S +FSP G + S S D
Sbjct: 762 GKQLVS----GSYDDTVK--IWDPATGELLQTL-DGHSGTVESLAFSPDGKLLASGSYDN 814
Query: 444 TIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAG 503
TI LW + L ++GH + +W V F P G AS+S D T +IW + + + +
Sbjct: 815 TIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDS 874
Query: 504 HLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMA 563
H V V + + +A+ S D T+++W+ ++GE + G + S+A SPDG+ +A
Sbjct: 875 HSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLA 934
Query: 564 SGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
SG E T+ +W+ A+G + L GH+ V ++A+S +G LAS S+D T+KLW+ TT
Sbjct: 935 SGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTT 991
Score = 368 (134.6 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 98/311 (31%), Positives = 159/311 (51%)
Query: 348 INTHNG-LNCASISQDGSLVAGGFSDSSLKVWDMA--KLGQQ---------AVSSGLQGE 395
++ H+G + + S DG L+A G D+++ +WD A +L Q +V+ G+
Sbjct: 788 LDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGK 847
Query: 396 NDTTPREDIIGPNGRKRSYTLYQ---GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
+ +D + L Q HS V S +FSP G + SSS D+TI++W+
Sbjct: 848 ELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPAT 907
Query: 453 NANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVR 512
+G + V V F+P G AS S T ++W+ + L+ + GH V V
Sbjct: 908 GELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVA 967
Query: 513 WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIM 572
+ + +A+ SSD T++LW+ ++GE + F GH I ++A SPDG+++ SG +D TI
Sbjct: 968 FSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIK 1027
Query: 573 MWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
+WDLA+ L H+ V +A+S + LAS S D T+KLWD T ++ +T E
Sbjct: 1028 LWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATG-ELQRTLE-GH 1085
Query: 633 TNRLRSLKTLP 643
+ +RS+ P
Sbjct: 1086 SQGVRSVTFSP 1096
Score = 366 (133.9 bits), Expect = 8.1e-29, Sum P(2) = 8.1e-29
Identities = 105/342 (30%), Positives = 171/342 (50%)
Query: 329 RNRVHLSSAALPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMA--KLGQ- 385
+N V L + A + T + + S DG +A SD+++K+W+ +L Q
Sbjct: 939 KNTVKLWNPATGEL-LQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQT 997
Query: 386 --------QAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQG---HSGPVYSASFSPLGD 434
+AV+ G++ + +D + L Q HS V++ +FSP
Sbjct: 998 FKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDK 1057
Query: 435 FILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDR 494
+ SSS D+TI+LW + +GH+ V V F+P G AS+S+D T ++W+
Sbjct: 1058 QLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLT 1117
Query: 495 IQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLA 554
+ + + G VD V + + +A+G D T++LWD ++GE ++ GH I S+
Sbjct: 1118 GELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVV 1177
Query: 555 MSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVK 614
SPDG+ +ASG D T +WD A+G + GH+ V ++A+S +G LLAS S T+K
Sbjct: 1178 FSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIK 1237
Query: 615 LWDVTTSTKVLKT----EEKSGT-------NRLRSLKTLPTK 645
LWD T ++L+T +E +G+ NRL S+ TK
Sbjct: 1238 LWDPVTG-ELLQTLNDPDESAGSVAFSPDGNRLASVDIFDTK 1278
Score = 359 (131.4 bits), Expect = 5.0e-28, Sum P(2) = 5.0e-28
Identities = 91/306 (29%), Positives = 151/306 (49%)
Query: 330 NRVHLSSAALPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLG--QQA 387
N + L +A + TF + + + + DG +A DS++K+WD+A G QQ
Sbjct: 814 NTIDLWDSATGEL-LQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLAT-GELQQT 871
Query: 388 VSSGLQGENDT--TPREDIIGPNGRKRSYTLY-----------QGHSGPVYSASFSPLGD 434
+ S Q +P ++ + + ++ +G SG V S +FSP G
Sbjct: 872 LDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGK 931
Query: 435 FILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDR 494
+ S S T++LW+ L +GH+ V V F+P G ASSS D T ++W+
Sbjct: 932 KLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTT 991
Query: 495 IQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLA 554
+ + GH + V + + ++ +GS D T++LWD+++ E + H + ++A
Sbjct: 992 GELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVA 1051
Query: 555 MSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVK 614
SPD + +AS D TI +WD A+G L GH+ V ++ +S +G LLAS S D T+K
Sbjct: 1052 FSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIK 1111
Query: 615 LWDVTT 620
LW+ T
Sbjct: 1112 LWNPLT 1117
Score = 343 (125.8 bits), Expect = 3.2e-26, Sum P(2) = 3.2e-26
Identities = 77/226 (34%), Positives = 121/226 (53%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+ H GPV S FSP G ++S S D T+++W L GH+ V + F+P G
Sbjct: 747 ENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKL 806
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
AS S+D T +W + L+ GH + V + + +A+ S D T+++WD+++G
Sbjct: 807 LASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATG 866
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY 597
E + H + S+A SPDG+ +AS D TI +W+ A+G L G + V ++A+
Sbjct: 867 ELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAF 926
Query: 598 SCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLP 643
S +G LASGS TVKLW+ T ++L+T E + +RS+ P
Sbjct: 927 SPDGKKLASGSEKNTVKLWNPATG-ELLQTLE-GHSQSVRSVAFSP 970
Score = 284 (105.0 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 79/262 (30%), Positives = 125/262 (47%)
Query: 348 INTHN-GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSG-LQGENDTT--PRED 403
+ H+ ++ + S D +A DS++K+WD A Q G QG T P
Sbjct: 1040 LEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGK 1099
Query: 404 IIGPNGRKRSYTLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
++ N + L+ G S V S +FSP G + S D+TI+LW +
Sbjct: 1100 LLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSAT 1159
Query: 453 NANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVR 512
L +GH+ + V F+P G AS S+D+TA++W + L+I GH V+ V
Sbjct: 1160 GELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVA 1219
Query: 513 WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIM 572
+ + +A+ S +T++LWD +GE ++ S+A SPDG +AS D T
Sbjct: 1220 FSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFDT-K 1278
Query: 573 MWDLASGRCVTPLMGHTSCVWT 594
+WD A+G + L GH+ VW+
Sbjct: 1279 IWDPATGELLQALKGHSKWVWS 1300
Score = 263 (97.6 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 54/159 (33%), Positives = 90/159 (56%)
Query: 485 RTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFI 544
+ + WS ++ + + HL V+ V + + + +GS D TV++WD ++GE ++
Sbjct: 734 KVEQTWSAEQ----QTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLD 789
Query: 545 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLL 604
GH + SLA SPDG+ +ASG D TI +WD A+G + GH +W++A++ +G L
Sbjct: 790 GHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKEL 849
Query: 605 ASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLP 643
AS S D T+K+WD+ T L+ S + +RS+ P
Sbjct: 850 ASASDDSTIKIWDLATGE--LQQTLDSHSQSVRSVAFSP 886
Score = 38 (18.4 bits), Expect = 6.0e-33, Sum P(2) = 6.0e-33
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 185 IINERINFQVSPGQPSS----ISDDAEIVTLIGS-NQDAANQINQKEVHWGLLEDSLENR 239
++N R + +P Q S S + I I + N +Q+ + E W + +LEN
Sbjct: 690 VLNNRHLAETAPLQLYSSGLMFSPEGSITRRIFNYNLSGWSQLPKVEQTWSAEQQTLENH 749
Query: 240 L 240
L
Sbjct: 750 L 750
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 365 (133.5 bits), Expect = 7.5e-33, P = 7.5e-33
Identities = 87/334 (26%), Positives = 160/334 (47%)
Query: 308 KPDLALPVMPTEVEQSILEDLRNRVHLSSAALPSVSFYTF--INTHN-GLNCASISQDGS 364
K + L TE + +++ L+ ++ +S + +FY F + H L ++++ GS
Sbjct: 50 KAEPLLTASRTEQVKLLIQRLQEKLGQNS----NHTFYLFKVLKAHILPLTNVALNKSGS 105
Query: 365 LVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRK------------- 411
G D + K+WD A G++ + L+G + P G K
Sbjct: 106 CFITGSYDRTCKLWDTAS-GEEL--NTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLW 162
Query: 412 -----RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPV 466
+ Y ++GH+ + SF+P + + S DTT +LW + + +GH+ +
Sbjct: 163 SVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEI 222
Query: 467 WDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSD 526
+ FN G + S D T +W D + + I+ GH +++ ++ +C+ I TGS D
Sbjct: 223 ISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMD 282
Query: 527 KTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLM 586
KT +LWD ++G+CV GH IL G+ +A+ DGT ++ A+ +C+ L
Sbjct: 283 KTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLE 342
Query: 587 GHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
GH + ++++ +G+ L +GS+D T ++WD T
Sbjct: 343 GHEGEISKISFNPQGNHLLTGSSDKTARIWDAQT 376
Score = 332 (121.9 bits), Expect = 2.9e-31, Sum P(2) = 2.9e-31
Identities = 69/216 (31%), Positives = 113/216 (52%)
Query: 418 QGHSGPVYSASFS-PLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
+GH VY+ +F+ P GD I + S D T +LWS + ++GH + + FNPQ
Sbjct: 131 EGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQST 190
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
A+ S D TA++W + + + + GH +++ + ++ + + I TGS D TV +WD +
Sbjct: 191 LVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADT 250
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
G V I IGH + I S + + D + +G D T +WD +G+CV L GH +
Sbjct: 251 GRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSC 310
Query: 597 YSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
+ G L+A+ SAD T +++ T + K E G
Sbjct: 311 FDYTGKLIATASADGTARIFSAATRKCIAKLEGHEG 346
Score = 297 (109.6 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 65/224 (29%), Positives = 115/224 (51%)
Query: 394 GENDTTPRE-DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
G DTT + DI NG + YTL +GHS + S SF+ GD I++ S D T+ +W
Sbjct: 195 GSMDTTAKLWDI--QNGEE-VYTL-RGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADT 250
Query: 453 NANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVR 512
+ GH + FN + S D+T ++W + + + GH ++
Sbjct: 251 GRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSC 310
Query: 513 WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIM 572
+ IAT S+D T R++ ++ +C+ GH I ++ +P G ++ +G D T
Sbjct: 311 FDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTAR 370
Query: 573 MWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
+WD +G+C+ L GHT +++ A++ +G+++ +GS D T ++W
Sbjct: 371 IWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 286 (105.7 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 58/166 (34%), Positives = 93/166 (56%)
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINC-N 518
K H P+ +V N G F + S+DRT ++W + L + GH + V + ++ +
Sbjct: 89 KAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGD 148
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
IATGS DKT +LW V +G+C F GH + I+ L+ +P +A+G D T +WD+ +
Sbjct: 149 KIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQN 208
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
G V L GH++ + +L+++ G + +GS D TV +WD T KV
Sbjct: 209 GEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKV 254
Score = 275 (101.9 bits), Expect = 8.0e-22, Sum P(2) = 8.0e-22
Identities = 70/245 (28%), Positives = 116/245 (47%)
Query: 344 FYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAK-------LGQQA----VSSGL 392
++TF + C S + +LVA G D++ K+WD+ G A +S
Sbjct: 170 YHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNT 229
Query: 393 QGENDTTPRED---IIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWS 449
G+ T D ++ R + GH + SASF+ IL+ S D T +LW
Sbjct: 230 SGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWD 289
Query: 450 TKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVD 509
+ GH+ + D F+ G A++S D TARI+S + + + GH ++
Sbjct: 290 ATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEIS 349
Query: 510 CVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDG 569
+ ++ N++ TGSSDKT R+WD +G+C+++ GH I S A + G + +G +D
Sbjct: 350 KISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDN 409
Query: 570 TIMMW 574
T +W
Sbjct: 410 TCRIW 414
Score = 217 (81.4 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 41/127 (32%), Positives = 76/127 (59%)
Query: 499 RIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMS-P 557
+++ H+ + V + + + TGS D+T +LWD +SGE + GHR+++ ++A + P
Sbjct: 86 KVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNP 145
Query: 558 DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
G +A+G D T +W + +G+C GHT+ + L+++ + +L+A+GS D T KLWD
Sbjct: 146 YGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD 205
Query: 618 VTTSTKV 624
+ +V
Sbjct: 206 IQNGEEV 212
Score = 42 (19.8 bits), Expect = 2.9e-31, Sum P(2) = 2.9e-31
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 129 LRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQSTKMLGIINE 188
+ ++QK E +L+ S E+++ L ++ K+ Q S YL K +L + N
Sbjct: 45 VEEIQKAEPLLTASRTEQVK----LLIQRLQEKLGQNSNHTF--YLFKVLKAHILPLTNV 98
Query: 189 RIN 191
+N
Sbjct: 99 ALN 101
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 355 (130.0 bits), Expect = 9.3e-32, P = 9.3e-32
Identities = 82/298 (27%), Positives = 141/298 (47%)
Query: 344 FYTF--INTHN-GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTP 400
FY F + H L ++++ GS G D + K+WD A G++ + L+G +
Sbjct: 82 FYLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTAS-GEELHT--LEGHRNVVY 138
Query: 401 REDIIGPNGRK------------------RSYTLYQGHSGPVYSASFSPLGDFILSSSAD 442
P G K + Y ++GH+ + SF+P + + S D
Sbjct: 139 AIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMD 198
Query: 443 TTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMA 502
TT +LW + + GH+ + + FN G+ + S D T +W D + + +
Sbjct: 199 TTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLI 258
Query: 503 GHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYM 562
GH +++ ++ +C+ I TGS DKT +LWD +G+CV GH IL G+ +
Sbjct: 259 GHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLI 318
Query: 563 ASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
A+ DGT ++ A+ CVT L GH + ++++ +G+ L +GS+D T ++WD T
Sbjct: 319 ATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQT 376
Score = 329 (120.9 bits), Expect = 6.4e-29, P = 6.4e-29
Identities = 71/220 (32%), Positives = 114/220 (51%)
Query: 414 YTLYQGHSGPVYSASFS-PLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFN 472
+TL +GH VY+ +F+ P GD I + S D T +LWS + ++GH + + FN
Sbjct: 128 HTL-EGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFN 186
Query: 473 PQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLW 532
PQ A+ S D TA++W + + + + GH +++ + ++ + N I TGS D TV +W
Sbjct: 187 PQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVW 246
Query: 533 DVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCV 592
+ +G V IGH + I S + D + +G D T +WD +G+CV L GH +
Sbjct: 247 EADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEI 306
Query: 593 WTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
+ G L+A+ SAD T +++ T V K E G
Sbjct: 307 LDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEG 346
Score = 284 (105.0 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 57/166 (34%), Positives = 94/166 (56%)
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINC-N 518
+ H P+ +V N G F + S+DRT ++W + L + GH + V + ++ +
Sbjct: 89 RAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGD 148
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
IATGS DKT +LW V +G+C F GH + I+ L+ +P +A+G D T +WD+ S
Sbjct: 149 KIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQS 208
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
G V L GH++ + +L+++ G+ + +GS D TV +W+ T KV
Sbjct: 209 GEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKV 254
Score = 282 (104.3 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 64/224 (28%), Positives = 112/224 (50%)
Query: 394 GENDTTPRE-DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
G DTT + DI +G + +TL GHS + S SF+ G+ I++ S D T+ +W
Sbjct: 195 GSMDTTAKLWDI--QSGEE-VFTL-TGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADT 250
Query: 453 NANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVR 512
+ GH + FN + S D+T ++W + + + GH ++
Sbjct: 251 GRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSC 310
Query: 513 WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIM 572
+ IAT S+D T R++ ++ ECV GH I ++ +P G + +G D T
Sbjct: 311 FDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTAR 370
Query: 573 MWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
+WD +G+C+ L GHT +++ A++ +G ++ +GS D T ++W
Sbjct: 371 IWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 267 (99.0 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 76/249 (30%), Positives = 122/249 (48%)
Query: 344 FYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVS-SGLQGEN-----D 397
++TF + C S + +LVA G D++ K+WD+ G++ + +G E +
Sbjct: 170 YHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQS-GEEVFTLTGHSAEIISLSFN 228
Query: 398 TTPREDIIGP-----------NGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIR 446
T+ I G GRK YTL GH + SA F+ IL+ S D T +
Sbjct: 229 TSGNRIITGSFDHTVTVWEADTGRK-VYTLI-GHCAEISSAVFNWDCSLILTGSMDKTCK 286
Query: 447 LWSTKLNANLVC-YKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHL 505
LW +N V GH+ + D F+ G A++S D TARI+S + + + GH
Sbjct: 287 LWDA-VNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHE 345
Query: 506 SDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASG 565
++ + ++ N + TGSSDKT R+WD +G+C+++ GH I S A + G + +G
Sbjct: 346 GEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITG 405
Query: 566 DEDGTIMMW 574
+D T +W
Sbjct: 406 SKDNTCRIW 414
Score = 218 (81.8 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 41/127 (32%), Positives = 77/127 (60%)
Query: 499 RIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMS-P 557
+++ H+ + V + + + TGS D+T +LWD +SGE + GHR+++ ++A + P
Sbjct: 86 KVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNP 145
Query: 558 DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
G +A+G D T +W + +G+C GHT+ + L+++ + +L+A+GS D T KLWD
Sbjct: 146 YGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD 205
Query: 618 VTTSTKV 624
+ + +V
Sbjct: 206 IQSGEEV 212
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 352 (129.0 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 76/220 (34%), Positives = 118/220 (53%)
Query: 414 YTLYQGHSGPVYSASFS-PLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFN 472
+TL +GH VY+ +F+ P GD I + S D T +LWS + ++GH + + FN
Sbjct: 128 HTL-EGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFN 186
Query: 473 PQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLW 532
PQ A+ S D TA++W + + + + GHL+++ + + + + I TGS D TV +W
Sbjct: 187 PQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVW 246
Query: 533 DVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCV 592
D S+G V IGH + I S S D + +G D T M+WD SG+CV L GH +
Sbjct: 247 DASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEI 306
Query: 593 WTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
+ G L+A+ SAD T ++++ TT + K E G
Sbjct: 307 LDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEG 346
Score = 352 (129.0 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 92/360 (25%), Positives = 166/360 (46%)
Query: 283 KDKAINATAKTSRLEANT-VSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLSSAALPS 341
K K+I+ + + NT V +V+P + T+ + +++ L+ ++
Sbjct: 26 KTKSIDLLELSPSTDVNTLVGEIQKVEP--LITASRTKQVRLLVQRLQEKLRQHC----D 79
Query: 342 VSFYTF--INTHN-GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT 398
+FY F + H L ++++ GS G D + KVWD A G++ + L+G +
Sbjct: 80 HNFYLFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTAS-GEELHT--LEGHRNV 136
Query: 399 TPREDIIGPNGRK------------------RSYTLYQGHSGPVYSASFSPLGDFILSSS 440
P G K + Y ++GH+ + SF+P + + S
Sbjct: 137 VYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGS 196
Query: 441 ADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRI 500
DTT +LW + +V GH + + F+ G + S D T +W + +
Sbjct: 197 MDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHT 256
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
+ GH +++ + +C+ I TGS DKT LWD +SG+CV GH IL G+
Sbjct: 257 LIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGK 316
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+A+ DGT +++ + +C+T L GH + ++++ +G+ L +GS+D T ++WDV T
Sbjct: 317 LIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQT 376
Score = 336 (123.3 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 69/215 (32%), Positives = 117/215 (54%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFN- 472
+ + + H P+ + + + G ++ S D T ++W T L +GH V+ + FN
Sbjct: 85 FKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNN 144
Query: 473 PQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLW 532
P G A+ S D+T ++WS + + GH +++ C+ ++ +ATGS D T +LW
Sbjct: 145 PYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLW 204
Query: 533 DVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCV 592
D+ SGE V GH + I+SL+ G + +G D T+++WD ++GR V L+GH + +
Sbjct: 205 DIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEI 264
Query: 593 WTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
+ +S + SL+ +GS D T LWD T S K + T
Sbjct: 265 SSALFSWDCSLILTGSMDKTCMLWDAT-SGKCVAT 298
Score = 266 (98.7 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 73/248 (29%), Positives = 121/248 (48%)
Query: 344 FYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVS-SGLQGEN-----D 397
++TF + C S + ++VA G D++ K+WD+ G++ V+ +G E D
Sbjct: 170 YHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQS-GEEVVTLTGHLAEIISLSFD 228
Query: 398 TTPREDIIGP-----------NGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIR 446
T+ I G GRK +TL GH + SA FS IL+ S D T
Sbjct: 229 TSGDRIITGSFDHTVVVWDASTGRK-VHTLI-GHCAEISSALFSWDCSLILTGSMDKTCM 286
Query: 447 LWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLS 506
LW + GH+ + D F+ G A++S D TAR+++ + + + GH
Sbjct: 287 LWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEG 346
Query: 507 DVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGD 566
++ + ++ N + TGSSDKT R+WDV +G+C+++ GH I S A + G + +G
Sbjct: 347 EISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGS 406
Query: 567 EDGTIMMW 574
+D + +W
Sbjct: 407 KDNSCRIW 414
Score = 260 (96.6 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 60/224 (26%), Positives = 111/224 (49%)
Query: 394 GENDTTPRE-DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
G DTT + DI +G + TL GH + S SF GD I++ S D T+ +W
Sbjct: 195 GSMDTTAKLWDI--QSGEE-VVTL-TGHLAEIISLSFDTSGDRIITGSFDHTVVVWDAST 250
Query: 453 NANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVR 512
+ GH + F+ + S D+T +W + + + GH ++
Sbjct: 251 GRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSC 310
Query: 513 WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIM 572
+ IAT S+D T R+++ ++ +C+ GH I ++ +P G + +G D T
Sbjct: 311 FDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTAR 370
Query: 573 MWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
+WD+ +G+C+ L GHT +++ A++ +G+++ +GS D + ++W
Sbjct: 371 IWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 338 (124.0 bits), Expect = 6.6e-30, P = 6.6e-30
Identities = 86/238 (36%), Positives = 120/238 (50%)
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
GR R Y H G V ++FSP G +L++S D + +W TK L GH PV
Sbjct: 17 GRVR---FYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKS 73
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
F+P G ASSS D + R+W + R + L ++ GH V+ V + + +A+G DK
Sbjct: 74 CCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKR 133
Query: 529 VRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTP---L 585
+W+V SG V + +GH I S SP +A+G D T+ +WDL + V L
Sbjct: 134 AIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNL 193
Query: 586 MGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLP 643
GHT + L YS G LLASGS D T+ +W TT+ L + K T + SL P
Sbjct: 194 EGHTGNISCLCYSASG-LLASGSWDKTICVWKPTTNN--LPLQLKGHTIWVNSLAFSP 248
Score = 306 (112.8 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 80/224 (35%), Positives = 109/224 (48%)
Query: 409 GRKRSYTLYQ--GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPV 466
G K L++ GH GPV S FSP G I SSS+D +IRLW + L KGH V
Sbjct: 54 GTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSV 113
Query: 467 WDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSD 526
V F+P AS D+ A +W + + + ++ GH + + + +ATGS D
Sbjct: 114 ETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWD 173
Query: 527 KTVRLWDVSSGECVRIFI---GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVT 583
TV +WD+ + V + GH I L S G +ASG D TI +W +
Sbjct: 174 STVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVWKPTTNNLPL 232
Query: 584 PLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
L GHT V +LA+S + LAS TVK+WD T K L+T
Sbjct: 233 QLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTG-KCLET 275
Score = 242 (90.2 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 74/289 (25%), Positives = 119/289 (41%)
Query: 338 ALPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAK---LGQQAVSSGLQG 394
A+ V FY H +NC++ S DG + D + VW L + A G
Sbjct: 15 AVGRVRFYG--QHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVK 72
Query: 395 ENDTTPREDIIGPNGRKRSYTLY-----------QGHSGPVYSASFSPLGDFILSSSADT 443
+P +I + S L+ +GH V + SFSP + S D
Sbjct: 73 SCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDK 132
Query: 444 TIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPL---RI 500
+W + + GH + F+P A+ S D T IW + P+
Sbjct: 133 RAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHN 192
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
+ GH ++ C+ + + +A+GS DKT+ +W ++ GH + SLA SPD
Sbjct: 193 LEGHTGNISCLCYSAS-GLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDEL 251
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSA 609
+AS T+ +WD +G+C+ L G ++ +G LL SG+A
Sbjct: 252 KLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVSGAA 300
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 333 (122.3 bits), Expect = 2.3e-29, P = 2.3e-29
Identities = 69/219 (31%), Positives = 116/219 (52%)
Query: 402 EDIIGPNGRKRSYTL--YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
++ +G ++ Y Q H P+ + +F+ G ++ S D T ++W T L
Sbjct: 71 QEKVGQKDERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTL 130
Query: 460 KGHNYPVWDVQFN-PQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCN 518
+GH V+ + FN P G A+ S D+T ++WS + + GH +++ C+ ++
Sbjct: 131 EGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQST 190
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
+ATGS D T +LWDV SGE V GH + I+SL + G + +G D T ++WD+ S
Sbjct: 191 LVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPS 250
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
GR V L GH + + ++ + SL+A+ S D + K+WD
Sbjct: 251 GRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWD 289
Score = 326 (119.8 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 74/298 (24%), Positives = 141/298 (47%)
Query: 344 FYTF--INTHN-GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTP 400
FY F + H L + ++ GS G D + K+WD A G++ + L+G +
Sbjct: 82 FYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTAS-GEELHT--LEGHRNVVY 138
Query: 401 REDIIGPNGRK------------------RSYTLYQGHSGPVYSASFSPLGDFILSSSAD 442
P G K + + ++GH+ + +F+P + + S D
Sbjct: 139 AIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMD 198
Query: 443 TTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMA 502
TT +LW + + GH + + FN G + S D TA +W + + + +++
Sbjct: 199 TTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLS 258
Query: 503 GHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYM 562
GH ++ CV+++ +C+ IAT S DK+ ++WD G+C+ +GH +L + + G+ +
Sbjct: 259 GHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLI 318
Query: 563 ASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
A+ DGT ++ + +C+ L GH + + ++ +GS + + S D T ++W V T
Sbjct: 319 ATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKT 376
Score = 325 (119.5 bits), Expect = 1.7e-28, P = 1.7e-28
Identities = 68/220 (30%), Positives = 117/220 (53%)
Query: 414 YTLYQGHSGPVYSASFS-PLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFN 472
+TL +GH VY+ +F+ P GD + + S D T +LWS + ++GH + + FN
Sbjct: 128 HTL-EGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFN 186
Query: 473 PQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLW 532
PQ A+ S D TA++W ++ + + +AGH +++ + ++ + + TGS D T LW
Sbjct: 187 PQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILW 246
Query: 533 DVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCV 592
DV SG V + GHR I + + D +A+ D + +WD G+C+ L+GH V
Sbjct: 247 DVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEV 306
Query: 593 WTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
+ ++ G L+A+ SAD T +++ T + + E G
Sbjct: 307 LDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKG 346
Score = 287 (106.1 bits), Expect = 5.7e-23, P = 5.7e-23
Identities = 60/166 (36%), Positives = 92/166 (55%)
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINC-N 518
+ H P+ +V FN G F + S+DRT +IW + L + GH + V + ++ +
Sbjct: 89 QAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGD 148
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
+ATGS DKT +LW +G+C F GH + I+ LA +P +A+G D T +WD+ S
Sbjct: 149 KVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVES 208
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
G V+ L GH + + +L ++ G L +GS D T LWDV + KV
Sbjct: 209 GEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKV 254
Score = 267 (99.0 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 73/247 (29%), Positives = 119/247 (48%)
Query: 344 FYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGEN-----DT 398
FYTF + C + + +LVA G D++ K+WD+ + + +G E +T
Sbjct: 170 FYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNT 229
Query: 399 TPREDIIG-----------PNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRL 447
T + G P+GRK + L GH G + F+ I ++S D + ++
Sbjct: 230 TGDRLVTGSFDHTAILWDVPSGRK-VHVL-SGHRGEISCVQFNWDCSLIATASLDKSCKV 287
Query: 448 WSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSD 507
W + L GHN V DV FN G A++S D T+R++S D Q L + GH +
Sbjct: 288 WDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGE 347
Query: 508 VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDE 567
+ V ++ + + T S DKT R+W V +G C+++ GH I S A + +G + +G +
Sbjct: 348 ISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSK 407
Query: 568 DGTIMMW 574
D T +W
Sbjct: 408 DNTCRIW 414
Score = 257 (95.5 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 64/224 (28%), Positives = 111/224 (49%)
Query: 394 GENDTTPRE-DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
G DTT + D+ +G + S TL GH + S F+ GD +++ S D T LW
Sbjct: 195 GSMDTTAKLWDV--ESGEEVS-TL-AGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPS 250
Query: 453 NANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVR 512
+ GH + VQFN A++S D++ ++W + Q L + GH +V V
Sbjct: 251 GRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVC 310
Query: 513 WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIM 572
++ IAT S+D T R++ + +C+ GH+ I + + G + + D T
Sbjct: 311 FNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSR 370
Query: 573 MWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
+W + +G C+ L GH+ +++ A++ EG + +GS D T ++W
Sbjct: 371 VWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 220 (82.5 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 43/127 (33%), Positives = 76/127 (59%)
Query: 499 RIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMS-P 557
R + H+ + V ++ + + TGS D+T ++WD +SGE + GHR+++ ++A + P
Sbjct: 86 RALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNP 145
Query: 558 DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
G +A+G D T +W +G+C GHT+ + LA++ + +L+A+GS D T KLWD
Sbjct: 146 YGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWD 205
Query: 618 VTTSTKV 624
V + +V
Sbjct: 206 VESGEEV 212
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 331 (121.6 bits), Expect = 3.9e-29, P = 3.9e-29
Identities = 77/269 (28%), Positives = 136/269 (50%)
Query: 362 DGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHS 421
DG A S S + G A + Q N G K TL +GH+
Sbjct: 29 DGGSSAPAPSTSPNSISPSNPTGTPAPGASAQTPNPNAAGASASGSANYKLMCTL-EGHT 87
Query: 422 GPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK---GHNYPVWDVQFNPQGHYF 478
+ SA FSP G ++ +SSAD T+++W+ +++C + GH V D+ ++
Sbjct: 88 KSISSAKFSPCGKYLGTSSADKTVKIWNMD---HMICERTLTGHKLGVNDIAWSSDSRCV 144
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
S+S D+T +I+ + + + + GH + V C ++ + + +GS D++VR+WDV +G
Sbjct: 145 VSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGM 204
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSC-VWTLAY 597
C++ H + +++ + DG +ASG DG + +WD A+G+C+ L+ + V + +
Sbjct: 205 CIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKF 264
Query: 598 SCEGSLLASGSADCTVKLWDVTTSTKVLK 626
S G + + + D T+KLWD + K LK
Sbjct: 265 SPNGKYILASNLDSTLKLWDFSKG-KTLK 292
Score = 282 (104.3 bits), Expect = 7.9e-24, P = 7.9e-24
Identities = 57/206 (27%), Positives = 106/206 (51%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH V ++S ++S+S D T++++ + KGHN V+ FNPQ
Sbjct: 127 GHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV 186
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
S S D + RIW + ++ + H V V ++ + + IA+GS D VR+WD ++G+
Sbjct: 187 VSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQ 246
Query: 539 CVRIFIGHRSM-ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS---CVWT 594
C++ + + + + SP+G+Y+ + + D T+ +WD + G+ + GH + C++
Sbjct: 247 CIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFA 306
Query: 595 LAYSCEGSLLASGSADCTVKLWDVTT 620
G + SGS DC + +W++ T
Sbjct: 307 NFSVTGGKWIISGSEDCKIYIWNLQT 332
Score = 258 (95.9 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 63/207 (30%), Positives = 103/207 (49%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V+ +F+P ++S S D ++R+W K + H+ PV V FN G
Sbjct: 168 KGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSL 227
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSD-VDCVRWHINCNYIATGSSDKTVRLWDVSS 536
AS S+D RIW Q ++ + + V V++ N YI + D T++LWD S
Sbjct: 228 IASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSK 287
Query: 537 GECVRIFIGHRSM---ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVW 593
G+ ++ + GH + I + G+++ SG ED I +W+L + V L GHT V
Sbjct: 288 GKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPV- 346
Query: 594 TLAYSCEG--SLLASGSA--DCTVKLW 616
LA C +++ASG+ D + +W
Sbjct: 347 -LASDCHPVQNIIASGALEPDNKIHIW 372
Score = 217 (81.4 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 67/299 (22%), Positives = 126/299 (42%)
Query: 269 VEGGKQGASIKKLKKDKAINATAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDL 328
++ + AS + + + I+ + + + + AP P+ P PT
Sbjct: 1 MDTSENAASAAEQQPTQQIDQLTVPNAPDGGSSAPAPSTSPNSISPSNPTGTPAPGASAQ 60
Query: 329 RNRVHLSSAALPSVSFYTFINTHNG----LNCASISQDGSLVAGGFSDSSLKVWDMAKLG 384
+ + A+ + Y + T G ++ A S G + +D ++K+W+M +
Sbjct: 61 TPNPNAAGASASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMI 120
Query: 385 QQAVSSGLQ-GENDTTPRED---IIGPNGRK----------RSYTLYQGHSGPVYSASFS 430
+ +G + G ND D ++ + K R +GH+ V+ +F+
Sbjct: 121 CERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFN 180
Query: 431 PLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIW 490
P ++S S D ++R+W K + H+ PV V FN G AS S+D RIW
Sbjct: 181 PQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIW 240
Query: 491 SMDRIQPLRIMAGHLSD-VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRS 548
Q ++ + + V V++ N YI + D T++LWD S G+ ++ + GH +
Sbjct: 241 DTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHEN 299
Score = 198 (74.8 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 46/156 (29%), Positives = 80/156 (51%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
+ GH + ++ Y+ T S+DKTV++W++ C R GH+ + +A S D R
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+ S +D T+ ++++ + R L GH + V+ ++ + SL+ SGS D +V++WDV
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDV-- 200
Query: 621 STKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQVLR 656
K+G +KTLP S PV ++ R
Sbjct: 201 ---------KTGM----CIKTLPAHSDPVSAVSFNR 223
Score = 155 (59.6 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 56/205 (27%), Positives = 86/205 (41%)
Query: 351 HNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQ------------QAVSSGLQGEND 397
HN + C + + SLV G D S+++WD+ K G AVS G
Sbjct: 170 HNNYVFCCNFNPQSSLVVSGSFDESVRIWDV-KTGMCIKTLPAHSDPVSAVSFNRDGSLI 228
Query: 398 TTPREDII-----GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
+ D + NG+ TL + PV FSP G +IL+S+ D+T++LW
Sbjct: 229 ASGSYDGLVRIWDTANGQCIK-TLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSK 287
Query: 453 NANLVCYKGHNYPVWDVQFN---PQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVD 509
L Y GH + + N G + S S D IW++ + ++ + GH V
Sbjct: 288 GKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVL 347
Query: 510 CVRWHINCNYIATGS--SDKTVRLW 532
H N IA+G+ D + +W
Sbjct: 348 ASDCHPVQNIIASGALEPDNKIHIW 372
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 331 (121.6 bits), Expect = 3.9e-29, P = 3.9e-29
Identities = 77/269 (28%), Positives = 136/269 (50%)
Query: 362 DGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHS 421
DG A S S + G A + Q N G K TL +GH+
Sbjct: 29 DGGSSAPAPSTSPNSISPSNPTGTPAPGASAQTPNPNAAGASASGSANYKLMCTL-EGHT 87
Query: 422 GPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK---GHNYPVWDVQFNPQGHYF 478
+ SA FSP G ++ +SSAD T+++W+ +++C + GH V D+ ++
Sbjct: 88 KSISSAKFSPCGKYLGTSSADKTVKIWNMD---HMICERTLTGHKLGVNDIAWSSDSRCV 144
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
S+S D+T +I+ + + + + GH + V C ++ + + +GS D++VR+WDV +G
Sbjct: 145 VSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGM 204
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSC-VWTLAY 597
C++ H + +++ + DG +ASG DG + +WD A+G+C+ L+ + V + +
Sbjct: 205 CIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKF 264
Query: 598 SCEGSLLASGSADCTVKLWDVTTSTKVLK 626
S G + + + D T+KLWD + K LK
Sbjct: 265 SPNGKYILASNLDSTLKLWDFSKG-KTLK 292
Score = 282 (104.3 bits), Expect = 7.9e-24, P = 7.9e-24
Identities = 57/206 (27%), Positives = 106/206 (51%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH V ++S ++S+S D T++++ + KGHN V+ FNPQ
Sbjct: 127 GHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV 186
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
S S D + RIW + ++ + H V V ++ + + IA+GS D VR+WD ++G+
Sbjct: 187 VSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQ 246
Query: 539 CVRIFIGHRSM-ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS---CVWT 594
C++ + + + + SP+G+Y+ + + D T+ +WD + G+ + GH + C++
Sbjct: 247 CIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFA 306
Query: 595 LAYSCEGSLLASGSADCTVKLWDVTT 620
G + SGS DC + +W++ T
Sbjct: 307 NFSVTGGKWIISGSEDCKIYIWNLQT 332
Score = 258 (95.9 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 63/207 (30%), Positives = 103/207 (49%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V+ +F+P ++S S D ++R+W K + H+ PV V FN G
Sbjct: 168 KGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSL 227
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSD-VDCVRWHINCNYIATGSSDKTVRLWDVSS 536
AS S+D RIW Q ++ + + V V++ N YI + D T++LWD S
Sbjct: 228 IASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSK 287
Query: 537 GECVRIFIGHRSM---ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVW 593
G+ ++ + GH + I + G+++ SG ED I +W+L + V L GHT V
Sbjct: 288 GKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPV- 346
Query: 594 TLAYSCEG--SLLASGSA--DCTVKLW 616
LA C +++ASG+ D + +W
Sbjct: 347 -LASDCHPVQNIIASGALEPDNKIHIW 372
Score = 217 (81.4 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 67/299 (22%), Positives = 126/299 (42%)
Query: 269 VEGGKQGASIKKLKKDKAINATAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDL 328
++ + AS + + + I+ + + + + AP P+ P PT
Sbjct: 1 MDTSENAASAAEQQPTQQIDQLTVPNAPDGGSSAPAPSTSPNSISPSNPTGTPAPGASAQ 60
Query: 329 RNRVHLSSAALPSVSFYTFINTHNG----LNCASISQDGSLVAGGFSDSSLKVWDMAKLG 384
+ + A+ + Y + T G ++ A S G + +D ++K+W+M +
Sbjct: 61 TPNPNAAGASASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMI 120
Query: 385 QQAVSSGLQ-GENDTTPRED---IIGPNGRK----------RSYTLYQGHSGPVYSASFS 430
+ +G + G ND D ++ + K R +GH+ V+ +F+
Sbjct: 121 CERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFN 180
Query: 431 PLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIW 490
P ++S S D ++R+W K + H+ PV V FN G AS S+D RIW
Sbjct: 181 PQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIW 240
Query: 491 SMDRIQPLRIMAGHLSD-VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRS 548
Q ++ + + V V++ N YI + D T++LWD S G+ ++ + GH +
Sbjct: 241 DTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHEN 299
Score = 198 (74.8 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 46/156 (29%), Positives = 80/156 (51%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
+ GH + ++ Y+ T S+DKTV++W++ C R GH+ + +A S D R
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+ S +D T+ ++++ + R L GH + V+ ++ + SL+ SGS D +V++WDV
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDV-- 200
Query: 621 STKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQVLR 656
K+G +KTLP S PV ++ R
Sbjct: 201 ---------KTGM----CIKTLPAHSDPVSAVSFNR 223
Score = 155 (59.6 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 56/205 (27%), Positives = 86/205 (41%)
Query: 351 HNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQ------------QAVSSGLQGEND 397
HN + C + + SLV G D S+++WD+ K G AVS G
Sbjct: 170 HNNYVFCCNFNPQSSLVVSGSFDESVRIWDV-KTGMCIKTLPAHSDPVSAVSFNRDGSLI 228
Query: 398 TTPREDII-----GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
+ D + NG+ TL + PV FSP G +IL+S+ D+T++LW
Sbjct: 229 ASGSYDGLVRIWDTANGQCIK-TLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSK 287
Query: 453 NANLVCYKGHNYPVWDVQFN---PQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVD 509
L Y GH + + N G + S S D IW++ + ++ + GH V
Sbjct: 288 GKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVL 347
Query: 510 CVRWHINCNYIATGS--SDKTVRLW 532
H N IA+G+ D + +W
Sbjct: 348 ASDCHPVQNIIASGALEPDNKIHIW 372
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 329 (120.9 bits), Expect = 6.4e-29, P = 6.4e-29
Identities = 72/221 (32%), Positives = 118/221 (53%)
Query: 411 KRSYTL---YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVW 467
K +YTL GH+ V S FSP G+++ SSSAD I++W GH +
Sbjct: 32 KPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 91
Query: 468 DVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDK 527
DV ++ + S+S D+T +IW + + L+ + GH + V C ++ N I +GS D+
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 528 TVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMG 587
+VR+WDV +G+C++ H + ++ + DG + S DG +WD ASG+C+ L+
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 588 HTSC-VWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
+ V + +S G + + + D T+KLWD + K LKT
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-KCLKT 251
Score = 292 (107.8 bits), Expect = 6.6e-25, P = 6.6e-25
Identities = 79/293 (26%), Positives = 134/293 (45%)
Query: 345 YTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDM--AKLGQQAVSSGLQGENDTTPRE 402
+T ++ S +G +A +D +K+W K ++ +S G +D
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF-EKTISGHKLGISDVAWSS 97
Query: 403 D---IIGPNGRK----------RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWS 449
D ++ + K + +GHS V+ +F+P + I+S S D ++R+W
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 450 TKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSD-V 508
K L H+ PV V FN G SSS+D RIW Q L+ + + V
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 217
Query: 509 DCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRS---MILSLAMSPDGRYMASG 565
V++ N YI + D T++LWD S G+C++ + H++ I + G+++ SG
Sbjct: 218 SFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSG 277
Query: 566 DEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSA--DCTVKLW 616
ED + +W+L + V L GHT V + A +++AS + D T+KLW
Sbjct: 278 SEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 283 (104.7 bits), Expect = 6.2e-24, P = 6.2e-24
Identities = 60/214 (28%), Positives = 107/214 (50%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH + ++S + ++S+S D T+++W L KGH+ V+ FNPQ +
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 144
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
S S D + RIW + + L+ + H V V ++ + + I + S D R+WD +SG+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 539 CVRIFIGHRSMILSLA-MSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS---CVWT 594
C++ I + +S SP+G+Y+ + D T+ +WD + G+C+ H + C++
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFA 264
Query: 595 LAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTE 628
G + SGS D V +W++ T V K +
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQ 298
Score = 230 (86.0 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 50/156 (32%), Positives = 87/156 (55%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
+AGH V V++ N ++A+ S+DK +++W G+ + GH+ I +A S D
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+ S +D T+ +WD++SG+C+ L GH++ V+ ++ + +L+ SGS D +V++WDV
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-- 158
Query: 621 STKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQVLR 656
K+G + LKTLP S PV ++ R
Sbjct: 159 ---------KTG----KCLKTLPAHSDPVSAVHFNR 181
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 329 (120.9 bits), Expect = 6.4e-29, P = 6.4e-29
Identities = 73/242 (30%), Positives = 130/242 (53%)
Query: 398 TTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLV 457
TT +E I G K T+ +GH+ + + FSP G F+ +SSAD T+++W+ ++L
Sbjct: 57 TTSQESTIPGAGYKLISTI-EGHTKSISAVKFSPCGKFLGTSSADKTVKIWNM---SDLS 112
Query: 458 CYK---GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
C + GH V D ++ ++S D+T +I+ + ++ + + GH + V C ++
Sbjct: 113 CERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFN 172
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
+ + +GS D++VR+WDV +G CV+ H + +++ + DG + SG DG + +W
Sbjct: 173 PQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIW 232
Query: 575 DLASGRCVTPLMGHTSC-VWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGT 633
D A+G+CV L+ + V + +S G + S + D T+KLWD K LK +
Sbjct: 233 DTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKG-KTLKQYQGHEN 291
Query: 634 NR 635
N+
Sbjct: 292 NK 293
Score = 273 (101.2 bits), Expect = 7.4e-23, P = 7.4e-23
Identities = 59/214 (27%), Positives = 104/214 (48%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH V ++S I+++S D T++++ KGH V+ FNPQ
Sbjct: 119 GHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLV 178
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
S S D + RIW + ++ + H V V ++ + + I +GS D VR+WD ++G+
Sbjct: 179 VSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQ 238
Query: 539 CVRIFIGHRSM-ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS---CVWT 594
CV+ + + + + SP+G+Y+ S + D T+ +WD G+ + GH + C++
Sbjct: 239 CVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFA 298
Query: 595 LAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTE 628
G + SGS DC + +W++ T V E
Sbjct: 299 NFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLE 332
Score = 262 (97.3 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 88/352 (25%), Positives = 157/352 (44%)
Query: 281 LKKDKAINATAKTSRLEANTVSTAPRVKPDLALP--VMPTEVEQSILEDLRNR-VHLSSA 337
+++ + +N + + A S +P P A+P PT ++S + + +
Sbjct: 18 VEEAQGVNNSEAEAPAPAALSSVSPANPPITAVPEATAPTTSQESTIPGAGYKLISTIEG 77
Query: 338 ALPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSL-KVWDMAKLGQQAVSSGLQGEN 396
S+S F + G + S D ++ SD S + KLG + ++
Sbjct: 78 HTKSISAVKF--SPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKS 135
Query: 397 DTTPRED----IIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
T +D I K + TL +GH+ V+ +F+P ++S S D ++R+W +
Sbjct: 136 IVTASDDKTLKIYEVPTVKMAKTL-KGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRT 194
Query: 453 NANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSD-VDCV 511
+ H+ PV V FN G S S+D RIW Q ++ + + V V
Sbjct: 195 GMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFV 254
Query: 512 RWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRS---MILSLAMSPDGRYMASGDED 568
++ N YI + + D T++LWD G+ ++ + GH + I + G+++ SG ED
Sbjct: 255 KFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSED 314
Query: 569 GTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEG--SLLASGSA--DCTVKLW 616
I +W+L + V L GHT V +A C +++ASG+ D T+++W
Sbjct: 315 CKIYVWNLQTKEVVQSLEGHTQAV--IASDCHPMQNMIASGALEPDNTIRIW 364
Score = 194 (73.4 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 45/154 (29%), Positives = 79/154 (51%)
Query: 503 GHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYM 562
GH + V++ ++ T S+DKTV++W++S C R GH+ + A S D + +
Sbjct: 77 GHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSI 136
Query: 563 ASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTST 622
+ +D T+ ++++ + + L GHT+ V+ ++ + SL+ SGS D +V++WDV T
Sbjct: 137 VTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGM 196
Query: 623 KVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQVLR 656
V KTLP S PV ++ R
Sbjct: 197 CV---------------KTLPAHSDPVSAVSFNR 215
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 328 (120.5 bits), Expect = 8.2e-29, P = 8.2e-29
Identities = 76/243 (31%), Positives = 126/243 (51%)
Query: 386 QAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTI 445
Q S ++ TP + PN + +TL GH+ V S FSP G+++ SSSAD I
Sbjct: 16 QPAPSAAATQSKPTP----VKPNYALK-FTL-AGHTKAVSSVKFSPNGEWLASSSADKLI 69
Query: 446 RLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHL 505
++W GH + DV ++ + S+S D+T +IW + + L+ + GH
Sbjct: 70 KIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS 129
Query: 506 SDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASG 565
+ V C ++ N I +GS D++VR+WDV +G+C++ H + ++ + DG + S
Sbjct: 130 NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 189
Query: 566 DEDGTIMMWDLASGRCVTPLMGHTSC-VWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
DG +WD ASG+C+ L+ + V + +S G + + + D T+KLWD + K
Sbjct: 190 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-KC 248
Query: 625 LKT 627
LKT
Sbjct: 249 LKT 251
Score = 304 (112.1 bits), Expect = 3.3e-26, P = 3.3e-26
Identities = 104/353 (29%), Positives = 159/353 (45%)
Query: 282 KKDKAINATAKTSRLEANTVSTAPRVKPDLALPVM---PTEVEQSILEDLRNRVHLSSAA 338
KK + A A+ + A T S VKP+ AL T+ S+ SS+A
Sbjct: 6 KKPETEAARAQPAPSAAATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSA 65
Query: 339 --LPSV------SFYTFINTHN-GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVS 389
L + F I+ H G++ + S D +L+ D +LK+WD VS
Sbjct: 66 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD--------VS 117
Query: 390 SGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWS 449
SG K TL +GHS V+ +F+P + I+S S D ++R+W
Sbjct: 118 SG-------------------KCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 450 TKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSD-V 508
K L H+ PV V FN G SSS+D RIW Q L+ + + V
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 217
Query: 509 DCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRS---MILSLAMSPDGRYMASG 565
V++ N YI + D T++LWD S G+C++ + GH++ I + G+++ SG
Sbjct: 218 SFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSG 277
Query: 566 DEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSA--DCTVKLW 616
ED + +W+L + V L GHT V + A +++AS + D T+KLW
Sbjct: 278 SEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 291 (107.5 bits), Expect = 8.4e-25, P = 8.4e-25
Identities = 61/214 (28%), Positives = 108/214 (50%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH + ++S + ++S+S D T+++W L KGH+ V+ FNPQ +
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 144
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
S S D + RIW + + L+ + H V V ++ + + I + S D R+WD +SG+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 539 CVRIFIGHRSMILSLA-MSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS---CVWT 594
C++ I + +S SP+G+Y+ + D T+ +WD + G+C+ GH + C++
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 264
Query: 595 LAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTE 628
G + SGS D V +W++ T V K +
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 298
Score = 230 (86.0 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 50/156 (32%), Positives = 87/156 (55%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
+AGH V V++ N ++A+ S+DK +++W G+ + GH+ I +A S D
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+ S +D T+ +WD++SG+C+ L GH++ V+ ++ + +L+ SGS D +V++WDV
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-- 158
Query: 621 STKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQVLR 656
K+G + LKTLP S PV ++ R
Sbjct: 159 ---------KTG----KCLKTLPAHSDPVSAVHFNR 181
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 327 (120.2 bits), Expect = 1.0e-28, P = 1.0e-28
Identities = 72/224 (32%), Positives = 120/224 (53%)
Query: 405 IGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNY 464
+ PN + +TL GH+ V S FSP G+++ SSSAD I++W GH
Sbjct: 31 VKPNYALK-FTL-AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 88
Query: 465 PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGS 524
+ DV ++ + S+S D+T +IW + + L+ + GH + V C ++ N I +GS
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query: 525 SDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTP 584
D++VR+WDV +G+C++ H + ++ + DG + S DG +WD ASG+C+
Sbjct: 149 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Query: 585 LMGHTSC-VWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
L+ + V + +S G + + + D T+KLWD + K LKT
Sbjct: 209 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-KCLKT 251
Score = 303 (111.7 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 86/280 (30%), Positives = 133/280 (47%)
Query: 344 FYTFINTHN-GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPRE 402
F I+ H G++ + S D +L+ D +LK+WD VSSG
Sbjct: 79 FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD--------VSSG----------- 119
Query: 403 DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGH 462
K TL +GHS V+ +F+P + I+S S D ++R+W K L H
Sbjct: 120 --------KCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH 170
Query: 463 NYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSD-VDCVRWHINCNYIA 521
+ PV V FN G SSS+D RIW Q L+ + + V V++ N YI
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 230
Query: 522 TGSSDKTVRLWDVSSGECVRIFIGHRS---MILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
+ D T++LWD S G+C++ + GH++ I + G+++ SG ED + +W+L +
Sbjct: 231 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 290
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSA--DCTVKLW 616
V L GHT V + A +++AS + D T+KLW
Sbjct: 291 KEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 291 (107.5 bits), Expect = 8.4e-25, P = 8.4e-25
Identities = 61/214 (28%), Positives = 108/214 (50%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH + ++S + ++S+S D T+++W L KGH+ V+ FNPQ +
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 144
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
S S D + RIW + + L+ + H V V ++ + + I + S D R+WD +SG+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 539 CVRIFIGHRSMILSLA-MSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS---CVWT 594
C++ I + +S SP+G+Y+ + D T+ +WD + G+C+ GH + C++
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 264
Query: 595 LAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTE 628
G + SGS D V +W++ T V K +
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 298
Score = 230 (86.0 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 50/156 (32%), Positives = 87/156 (55%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
+AGH V V++ N ++A+ S+DK +++W G+ + GH+ I +A S D
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+ S +D T+ +WD++SG+C+ L GH++ V+ ++ + +L+ SGS D +V++WDV
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-- 158
Query: 621 STKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQVLR 656
K+G + LKTLP S PV ++ R
Sbjct: 159 ---------KTG----KCLKTLPAHSDPVSAVHFNR 181
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 327 (120.2 bits), Expect = 1.0e-28, P = 1.0e-28
Identities = 72/224 (32%), Positives = 120/224 (53%)
Query: 405 IGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNY 464
+ PN + +TL GH+ V S FSP G+++ SSSAD I++W GH
Sbjct: 31 VKPNYALK-FTL-AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 88
Query: 465 PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGS 524
+ DV ++ + S+S D+T +IW + + L+ + GH + V C ++ N I +GS
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query: 525 SDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTP 584
D++VR+WDV +G+C++ H + ++ + DG + S DG +WD ASG+C+
Sbjct: 149 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Query: 585 LMGHTSC-VWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
L+ + V + +S G + + + D T+KLWD + K LKT
Sbjct: 209 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-KCLKT 251
Score = 303 (111.7 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 86/280 (30%), Positives = 133/280 (47%)
Query: 344 FYTFINTHN-GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPRE 402
F I+ H G++ + S D +L+ D +LK+WD VSSG
Sbjct: 79 FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD--------VSSG----------- 119
Query: 403 DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGH 462
K TL +GHS V+ +F+P + I+S S D ++R+W K L H
Sbjct: 120 --------KCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH 170
Query: 463 NYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSD-VDCVRWHINCNYIA 521
+ PV V FN G SSS+D RIW Q L+ + + V V++ N YI
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 230
Query: 522 TGSSDKTVRLWDVSSGECVRIFIGHRS---MILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
+ D T++LWD S G+C++ + GH++ I + G+++ SG ED + +W+L +
Sbjct: 231 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 290
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSA--DCTVKLW 616
V L GHT V + A +++AS + D T+KLW
Sbjct: 291 KEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 291 (107.5 bits), Expect = 8.4e-25, P = 8.4e-25
Identities = 61/214 (28%), Positives = 108/214 (50%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH + ++S + ++S+S D T+++W L KGH+ V+ FNPQ +
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 144
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
S S D + RIW + + L+ + H V V ++ + + I + S D R+WD +SG+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 539 CVRIFIGHRSMILSLA-MSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS---CVWT 594
C++ I + +S SP+G+Y+ + D T+ +WD + G+C+ GH + C++
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 264
Query: 595 LAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTE 628
G + SGS D V +W++ T V K +
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 298
Score = 230 (86.0 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 50/156 (32%), Positives = 87/156 (55%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
+AGH V V++ N ++A+ S+DK +++W G+ + GH+ I +A S D
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+ S +D T+ +WD++SG+C+ L GH++ V+ ++ + +L+ SGS D +V++WDV
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-- 158
Query: 621 STKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQVLR 656
K+G + LKTLP S PV ++ R
Sbjct: 159 ---------KTG----KCLKTLPAHSDPVSAVHFNR 181
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 327 (120.2 bits), Expect = 1.0e-28, P = 1.0e-28
Identities = 72/224 (32%), Positives = 120/224 (53%)
Query: 405 IGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNY 464
+ PN + +TL GH+ V S FSP G+++ SSSAD I++W GH
Sbjct: 31 VKPNYALK-FTL-AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 88
Query: 465 PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGS 524
+ DV ++ + S+S D+T +IW + + L+ + GH + V C ++ N I +GS
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query: 525 SDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTP 584
D++VR+WDV +G+C++ H + ++ + DG + S DG +WD ASG+C+
Sbjct: 149 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Query: 585 LMGHTSC-VWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
L+ + V + +S G + + + D T+KLWD + K LKT
Sbjct: 209 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-KCLKT 251
Score = 303 (111.7 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 86/280 (30%), Positives = 133/280 (47%)
Query: 344 FYTFINTHN-GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPRE 402
F I+ H G++ + S D +L+ D +LK+WD VSSG
Sbjct: 79 FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD--------VSSG----------- 119
Query: 403 DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGH 462
K TL +GHS V+ +F+P + I+S S D ++R+W K L H
Sbjct: 120 --------KCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH 170
Query: 463 NYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSD-VDCVRWHINCNYIA 521
+ PV V FN G SSS+D RIW Q L+ + + V V++ N YI
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 230
Query: 522 TGSSDKTVRLWDVSSGECVRIFIGHRS---MILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
+ D T++LWD S G+C++ + GH++ I + G+++ SG ED + +W+L +
Sbjct: 231 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 290
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSA--DCTVKLW 616
V L GHT V + A +++AS + D T+KLW
Sbjct: 291 KEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 291 (107.5 bits), Expect = 8.4e-25, P = 8.4e-25
Identities = 61/214 (28%), Positives = 108/214 (50%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH + ++S + ++S+S D T+++W L KGH+ V+ FNPQ +
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 144
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
S S D + RIW + + L+ + H V V ++ + + I + S D R+WD +SG+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 539 CVRIFIGHRSMILSLA-MSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS---CVWT 594
C++ I + +S SP+G+Y+ + D T+ +WD + G+C+ GH + C++
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 264
Query: 595 LAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTE 628
G + SGS D V +W++ T V K +
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 298
Score = 230 (86.0 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 50/156 (32%), Positives = 87/156 (55%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
+AGH V V++ N ++A+ S+DK +++W G+ + GH+ I +A S D
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+ S +D T+ +WD++SG+C+ L GH++ V+ ++ + +L+ SGS D +V++WDV
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-- 158
Query: 621 STKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQVLR 656
K+G + LKTLP S PV ++ R
Sbjct: 159 ---------KTG----KCLKTLPAHSDPVSAVHFNR 181
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 327 (120.2 bits), Expect = 1.0e-28, P = 1.0e-28
Identities = 72/224 (32%), Positives = 120/224 (53%)
Query: 405 IGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNY 464
+ PN + +TL GH+ V S FSP G+++ SSSAD I++W GH
Sbjct: 31 VKPNYALK-FTL-AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 88
Query: 465 PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGS 524
+ DV ++ + S+S D+T +IW + + L+ + GH + V C ++ N I +GS
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query: 525 SDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTP 584
D++VR+WDV +G+C++ H + ++ + DG + S DG +WD ASG+C+
Sbjct: 149 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Query: 585 LMGHTSC-VWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
L+ + V + +S G + + + D T+KLWD + K LKT
Sbjct: 209 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-KCLKT 251
Score = 303 (111.7 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 86/280 (30%), Positives = 133/280 (47%)
Query: 344 FYTFINTHN-GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPRE 402
F I+ H G++ + S D +L+ D +LK+WD VSSG
Sbjct: 79 FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD--------VSSG----------- 119
Query: 403 DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGH 462
K TL +GHS V+ +F+P + I+S S D ++R+W K L H
Sbjct: 120 --------KCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH 170
Query: 463 NYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSD-VDCVRWHINCNYIA 521
+ PV V FN G SSS+D RIW Q L+ + + V V++ N YI
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 230
Query: 522 TGSSDKTVRLWDVSSGECVRIFIGHRS---MILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
+ D T++LWD S G+C++ + GH++ I + G+++ SG ED + +W+L +
Sbjct: 231 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 290
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSA--DCTVKLW 616
V L GHT V + A +++AS + D T+KLW
Sbjct: 291 KEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 291 (107.5 bits), Expect = 8.4e-25, P = 8.4e-25
Identities = 61/214 (28%), Positives = 108/214 (50%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH + ++S + ++S+S D T+++W L KGH+ V+ FNPQ +
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 144
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
S S D + RIW + + L+ + H V V ++ + + I + S D R+WD +SG+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 539 CVRIFIGHRSMILSLA-MSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS---CVWT 594
C++ I + +S SP+G+Y+ + D T+ +WD + G+C+ GH + C++
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 264
Query: 595 LAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTE 628
G + SGS D V +W++ T V K +
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 298
Score = 230 (86.0 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 50/156 (32%), Positives = 87/156 (55%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
+AGH V V++ N ++A+ S+DK +++W G+ + GH+ I +A S D
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+ S +D T+ +WD++SG+C+ L GH++ V+ ++ + +L+ SGS D +V++WDV
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-- 158
Query: 621 STKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQVLR 656
K+G + LKTLP S PV ++ R
Sbjct: 159 ---------KTG----KCLKTLPAHSDPVSAVHFNR 181
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 327 (120.2 bits), Expect = 1.0e-28, P = 1.0e-28
Identities = 72/224 (32%), Positives = 120/224 (53%)
Query: 405 IGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNY 464
+ PN + +TL GH+ V S FSP G+++ SSSAD I++W GH
Sbjct: 5 VKPNYALK-FTL-AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 62
Query: 465 PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGS 524
+ DV ++ + S+S D+T +IW + + L+ + GH + V C ++ N I +GS
Sbjct: 63 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 122
Query: 525 SDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTP 584
D++VR+WDV +G+C++ H + ++ + DG + S DG +WD ASG+C+
Sbjct: 123 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 182
Query: 585 LMGHTSC-VWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
L+ + V + +S G + + + D T+KLWD + K LKT
Sbjct: 183 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-KCLKT 225
Score = 301 (111.0 bits), Expect = 6.9e-26, P = 6.9e-26
Identities = 80/293 (27%), Positives = 135/293 (46%)
Query: 345 YTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDM--AKLGQQAVSSGLQGENDTTPRE 402
+T ++ S +G +A +D +K+W K ++ +S G +D
Sbjct: 13 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF-EKTISGHKLGISDVAWSS 71
Query: 403 D---IIGPNGRK----------RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWS 449
D ++ + K + +GHS V+ +F+P + I+S S D ++R+W
Sbjct: 72 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 131
Query: 450 TKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSD-V 508
K L H+ PV V FN G SSS+D RIW Q L+ + + V
Sbjct: 132 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 191
Query: 509 DCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRS---MILSLAMSPDGRYMASG 565
V++ N YI + D T++LWD S G+C++ + GH++ I + G+++ SG
Sbjct: 192 SFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSG 251
Query: 566 DEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSA--DCTVKLW 616
ED + +W+L + V L GHT V + A +++AS + D T+KLW
Sbjct: 252 SEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 304
Score = 291 (107.5 bits), Expect = 8.4e-25, P = 8.4e-25
Identities = 61/214 (28%), Positives = 108/214 (50%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH + ++S + ++S+S D T+++W L KGH+ V+ FNPQ +
Sbjct: 59 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 118
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
S S D + RIW + + L+ + H V V ++ + + I + S D R+WD +SG+
Sbjct: 119 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 178
Query: 539 CVRIFIGHRSMILSLA-MSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS---CVWT 594
C++ I + +S SP+G+Y+ + D T+ +WD + G+C+ GH + C++
Sbjct: 179 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 238
Query: 595 LAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTE 628
G + SGS D V +W++ T V K +
Sbjct: 239 NFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 272
Score = 230 (86.0 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 50/156 (32%), Positives = 87/156 (55%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
+AGH V V++ N ++A+ S+DK +++W G+ + GH+ I +A S D
Sbjct: 15 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 74
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+ S +D T+ +WD++SG+C+ L GH++ V+ ++ + +L+ SGS D +V++WDV
Sbjct: 75 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-- 132
Query: 621 STKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQVLR 656
K+G + LKTLP S PV ++ R
Sbjct: 133 ---------KTG----KCLKTLPAHSDPVSAVHFNR 155
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 305 (112.4 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 62/215 (28%), Positives = 112/215 (52%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH V S +F P GDF+LS+S D TI+ W + ++GHN V ++ + G
Sbjct: 188 KGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTL 247
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY---------------IAT 522
FAS+S D+T +WS ++ H V+CV W + Y + +
Sbjct: 248 FASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFS 307
Query: 523 GSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCV 582
GS D++++ W++++G+ + + H + + LA P G+Y+ S +D T+ +W+L++ RC+
Sbjct: 308 GSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCM 367
Query: 583 TPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
+ H V T+A+ + +GS D + K+W+
Sbjct: 368 KAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWE 402
Score = 253 (94.1 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 65/218 (29%), Positives = 100/218 (45%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH P+ F PL + S S D TI++W + KGH V D+ + G
Sbjct: 104 GHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQL 163
Query: 479 ASSSHDRTARIWSMDRIQP-LRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
S S D + ++W + L+ + GH V V + +++ + S D T++ WD+S+G
Sbjct: 164 VSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTG 223
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH---TSCV-W 593
CV F GH + + +S DG AS D T+ +W A+ L H CV W
Sbjct: 224 YCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEW 283
Query: 594 T--LAYSC------EGS---LLASGSADCTVKLWDVTT 620
AY+ EG+ +L SGS D ++K W++ T
Sbjct: 284 APDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINT 321
Score = 251 (93.4 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 57/172 (33%), Positives = 85/172 (49%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH P+ V F+P AS S D T ++W + Q R + GH V+ + +
Sbjct: 104 GHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQL 163
Query: 521 ATGSSDKTVRLWDVSSG-ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
+ SSD +++LWD +C++ GH + S+ P G ++ S D TI WD+++G
Sbjct: 164 VSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTG 223
Query: 580 RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT-STK-VLKTEE 629
CV GH V + S +G+L AS S D TV +W T S K VL+ E
Sbjct: 224 YCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHE 275
Score = 200 (75.5 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 57/228 (25%), Positives = 102/228 (44%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNAN-LVCYKGHNYPVWDVQFNPQGH 476
+GH+ V + G ++S S+D +I+LW + L KGH + V V F P G
Sbjct: 145 KGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGD 204
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
+ S+S D T + W + + GH V +R + A+ S D+TV +W ++
Sbjct: 205 FVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFAT 264
Query: 537 GECVRIFIGHRSMILSLAMSPDGRY---------------MASGDEDGTIMMWDLASGRC 581
+ H + + +PD Y + SG D +I W++ +G
Sbjct: 265 KSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDV 324
Query: 582 VTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEE 629
+ L+ H + V LA+ +G L S + D T+++W+++ + +K E
Sbjct: 325 LFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQ-RCMKAIE 371
Score = 176 (67.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 56/214 (26%), Positives = 97/214 (45%)
Query: 408 NGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVW 467
NG S++++ S + PLG IL T +RL K+N +L +
Sbjct: 22 NGYSESFSVFLKESS-LSENDIKPLGG-ILEKKWTTVLRL-QRKVN-DL------ESKLQ 71
Query: 468 DVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDK 527
+ Q + ++ A + R A W + R + + GH + V +H +A+ S D
Sbjct: 72 ESQ--REINHGAPTRDKRQAADW-IPRPPETQKLTGHRLPITRVIFHPLWTIMASCSEDA 128
Query: 528 TVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR-CVTPLM 586
T+++WD +G+ R GH + +A+ G+ + S D +I +WD C+ L
Sbjct: 129 TIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLK 188
Query: 587 GHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
GH V ++ + G + S S D T+K WD++T
Sbjct: 189 GHEHTVSSVTFLPTGDFVLSASRDHTIKQWDIST 222
Score = 164 (62.8 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 63/256 (24%), Positives = 112/256 (43%)
Query: 352 NGLNCASISQDGSLVAGGFSDSSLKVWDMAKL--------GQQ-AVSS-GLQGEND---T 398
+ +N +I G + SD S+K+WD + G + VSS D +
Sbjct: 149 DAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLS 208
Query: 399 TPREDIIGPNGRKRSYTLY--QGHSGPVYSASFSPLGDFILSSSADTTIRLWS--TKLNA 454
R+ I Y +Y +GH+ V S G S+S D T+ +WS TK +A
Sbjct: 209 ASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATK-SA 267
Query: 455 NLVCYKGHNYPV----W--DVQFN------PQG---HYFASSSHDRTARIWSMDRIQPLR 499
LV + H + V W D + P+G H S S DR+ + W+++ L
Sbjct: 268 KLVL-RDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLF 326
Query: 500 IMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDG 559
+ H + V + +H Y+ + + DKT+R+W++S+ C++ H + ++A
Sbjct: 327 TLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTS 386
Query: 560 RYMASGDEDGTIMMWD 575
++ +G D + +W+
Sbjct: 387 PFVITGSVDMSCKVWE 402
Score = 154 (59.3 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 46/189 (24%), Positives = 82/189 (43%)
Query: 345 YTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDI 404
YTF ++ + IS DG+L A D ++ VW A + V L+ +
Sbjct: 227 YTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLV---LRDHEHAVECVEW 283
Query: 405 IGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNY 464
P+ +YT G P +++ + S S D +I+ W+ L H
Sbjct: 284 -APD---TAYTNVTGQQ-PEGNSTH-----ILFSGSRDRSIKAWNINTGDVLFTLLAHEN 333
Query: 465 PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGS 524
V + F+P+G Y S + D+T R+W + + ++ + H V V +H ++ TGS
Sbjct: 334 WVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGS 393
Query: 525 SDKTVRLWD 533
D + ++W+
Sbjct: 394 VDMSCKVWE 402
Score = 44 (20.5 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 12/65 (18%), Positives = 31/65 (47%)
Query: 10 VATYLKKKGFSEAENALQAEIQRNKSSNNTNPIDILNDPELSKFFRTFSESEDGPARYQD 69
+A Y++ G+SE+ + E + S N+ P+ + + + + R + D ++ Q+
Sbjct: 15 IAEYMQNNGYSESFSVFLKE--SSLSENDIKPLGGILEKKWTTVLRLQRKVNDLESKLQE 72
Query: 70 EYSKL 74
++
Sbjct: 73 SQREI 77
Score = 40 (19.1 bits), Expect = 4.3e-28, Sum P(2) = 4.3e-28
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 257 KEAEIDENKKRPVEG--GKQGASIKKL-KKDKAINATAKTSRLEAN 299
KE+ + EN +P+ G K+ ++ +L +K + + + S+ E N
Sbjct: 33 KESSLSENDIKPLGGILEKKWTTVLRLQRKVNDLESKLQESQREIN 78
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 313 (115.2 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 71/221 (32%), Positives = 120/221 (54%)
Query: 413 SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTK-LN---ANLVC-YKGHNYPVW 467
S TL H+ V S FS G + S+SAD TIR ++ +N A V + GH +
Sbjct: 17 SQTL-TSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGIS 75
Query: 468 DVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDK 527
DV F+ + S+S D+T ++W ++ ++ + GH + CV ++ N I +GS D+
Sbjct: 76 DVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDE 135
Query: 528 TVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMG 587
TVR+WDV++G+C+++ H + ++ + DG + S DG +WD +G CV L+
Sbjct: 136 TVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLID 195
Query: 588 HTSC-VWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
+ V + +S G + G+ D T++LW+++ S K LKT
Sbjct: 196 DENPPVSFVRFSPNGKFILVGTLDNTLRLWNIS-SAKFLKT 235
Score = 302 (111.4 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 68/202 (33%), Positives = 105/202 (51%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH+ + +F+P + I+S S D T+R+W L H+ PV V FN G
Sbjct: 111 GHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLI 170
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSD-VDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
SSS+D RIW ++ + + V VR+ N +I G+ D T+RLW++SS
Sbjct: 171 VSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSA 230
Query: 538 ECVRIFIGH--RSMILSLAMS-PDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ ++ + GH +S A S +G+ + SG ED + MW+L S + + L GHT V
Sbjct: 231 KFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMN 290
Query: 595 LAYSCEGSLLASGSADCTVKLW 616
+A +L+ASGS D TV++W
Sbjct: 291 VACHPTENLIASGSLDKTVRIW 312
Score = 297 (109.6 bits), Expect = 6.0e-28, Sum P(2) = 6.0e-28
Identities = 67/234 (28%), Positives = 120/234 (51%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
+ GH + +FS FI+S+S D T++LW + + + GH + V FNPQ +
Sbjct: 67 FTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSN 126
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
S S D T RIW + + L+++ H V V ++ + + I + S D R+WD +
Sbjct: 127 MIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGT 186
Query: 537 GECVRIFIGHRSMILSLA-MSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTL 595
G CV+ I + +S SP+G+++ G D T+ +W+++S + + GH + + +
Sbjct: 187 GHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCI 246
Query: 596 --AYSC-EGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKS 646
A+S G + SGS D V +W++ S K+L+ E T + ++ PT++
Sbjct: 247 SSAFSVTNGKRIVSGSEDNCVHMWELN-SKKLLQKLE-GHTETVMNVACHPTEN 298
Score = 205 (77.2 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 48/161 (29%), Positives = 86/161 (53%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS-----GECVRIFIGHRSMILSLAM 555
+ H V V++ + +A+ S+DKT+R + +++ E V+ F GH + I +A
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79
Query: 556 SPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKL 615
S D R++ S +D T+ +WD+ +G + L+GHT+ + + ++ + +++ SGS D TV++
Sbjct: 80 SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRI 139
Query: 616 WDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQVLR 656
WDVTT + LK LP S PV ++ R
Sbjct: 140 WDVTTG---------------KCLKVLPAHSDPVTAVDFNR 165
Score = 174 (66.3 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 58/206 (28%), Positives = 84/206 (40%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQ------------QAVSSGLQ 393
T I N C + + +++ G D ++++WD+ G+ AV
Sbjct: 108 TLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTT-GKCLKVLPAHSDPVTAVDFNRD 166
Query: 394 GENDTTPRED---IIGPNGRKRSY-TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWS 449
G + D I +G TL + PV FSP G FIL + D T+RLW+
Sbjct: 167 GSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWN 226
Query: 450 TKLNANLVCYKGH---NYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLS 506
L Y GH Y + G S S D +W ++ + L+ + GH
Sbjct: 227 ISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTE 286
Query: 507 DVDCVRWHINCNYIATGSSDKTVRLW 532
V V H N IA+GS DKTVR+W
Sbjct: 287 TVMNVACHPTENLIASGSLDKTVRIW 312
Score = 137 (53.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 42/182 (23%), Positives = 78/182 (42%)
Query: 347 FINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGEN-----DTTPR 401
F NG++ + S D + D +LK+WD+ + G + + + N + P+
Sbjct: 67 FTGHENGISDVAFSSDARFIVSASDDKTLKLWDV-ETGS-LIKTLIGHTNYAFCVNFNPQ 124
Query: 402 EDIIGPNGRKRSYTLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWST 450
++I + ++ HS PV + F+ G I+SSS D R+W +
Sbjct: 125 SNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDS 184
Query: 451 KLNANL-VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVD 509
+ N PV V+F+P G + + D T R+W++ + L+ GH++
Sbjct: 185 GTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQY 244
Query: 510 CV 511
C+
Sbjct: 245 CI 246
Score = 47 (21.6 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 9/51 (17%), Positives = 24/51 (47%)
Query: 328 LRNRVHLSSAALPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVW 378
+ + +++ P V T + + ++ S DG L+A +D +++ +
Sbjct: 1 MAEEIPATASFTPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTY 51
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 325 (119.5 bits), Expect = 1.7e-28, P = 1.7e-28
Identities = 70/221 (31%), Positives = 116/221 (52%)
Query: 411 KRSYTL---YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVW 467
K +YTL GH+ V + FSP G+++ SSSAD I++W GH +
Sbjct: 59 KPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 118
Query: 468 DVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDK 527
DV ++ S S D+T ++W + + L+ + GH + V C ++ N I +GS D+
Sbjct: 119 DVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 178
Query: 528 TVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMG 587
+VR+WDV +G+C++ H + ++ + DG + S DG +WD ASG+C+ L+
Sbjct: 179 SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 238
Query: 588 HTSC-VWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
+ V + +S G + + + D T+KLWD + K LKT
Sbjct: 239 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-KCLKT 278
Score = 307 (113.1 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 82/297 (27%), Positives = 136/297 (45%)
Query: 345 YTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDM--AKLGQQAVSSGLQGENDTTPRE 402
+T ++ S +G +A +D +K+W K ++ +S G +D
Sbjct: 66 FTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKF-EKTISGHKLGISDVAWSS 124
Query: 403 D----IIGPNGRK---------RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWS 449
D + G + + +S +GHS V+ +F+P + I+S S D ++R+W
Sbjct: 125 DSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 184
Query: 450 TKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSD-V 508
+ L H+ PV V FN G SSS+D RIW Q L+ + + V
Sbjct: 185 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 244
Query: 509 DCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRS---MILSLAMSPDGRYMASG 565
V++ N YI + D T++LWD S G+C++ + GH++ I + G+++ SG
Sbjct: 245 SFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSG 304
Query: 566 DEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSA--DCTVKLWDVTT 620
ED + +W+L S V L GHT V A +++AS + D T+KLW T
Sbjct: 305 SEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLWKSDT 361
Score = 288 (106.4 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 61/219 (27%), Positives = 109/219 (49%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH + ++S ++S S D T+++W +L KGH+ V+ FNPQ +
Sbjct: 112 GHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLI 171
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
S S D + RIW + + L+ + H V V ++ + + I + S D R+WD +SG+
Sbjct: 172 VSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 231
Query: 539 CVRIFIGHRSMILSLA-MSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS---CVWT 594
C++ I + +S SP+G+Y+ + D T+ +WD + G+C+ GH + C++
Sbjct: 232 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 291
Query: 595 LAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGT 633
G + SGS D V +W++ + V K + + T
Sbjct: 292 NFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDT 330
Score = 232 (86.7 bits), Expect = 9.0e-17, P = 9.0e-17
Identities = 58/192 (30%), Positives = 103/192 (53%)
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQP---LRI-MAGHLSDVDCVRWHINCNYIATGS 524
+Q N G A++S + +A S ++P L+ +AGH V V++ N ++A+ S
Sbjct: 32 LQPNSVGQPGATTSSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSS 91
Query: 525 SDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTP 584
+DK +++W G+ + GH+ I +A S D R + SG +D T+ +W+L++G+ +
Sbjct: 92 ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKT 151
Query: 585 LMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPT 644
L GH++ V+ ++ + +L+ SGS D +V++WDV T + LKTLP
Sbjct: 152 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG---------------KCLKTLPA 196
Query: 645 KSTPVYSLQVLR 656
S PV ++ R
Sbjct: 197 HSDPVSAVHFNR 208
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 323 (118.8 bits), Expect = 2.9e-28, P = 2.9e-28
Identities = 80/252 (31%), Positives = 128/252 (50%)
Query: 384 GQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLY------QGHSGPVYSASFSPLGDFIL 437
G S+G+ N T G +G Y Y +GH+ + FS G+ +
Sbjct: 4 GGNGTSNGVANANSTGNA----GTSGNVPIYKPYRHLKTLEGHTAAISCVKFSNDGNLLA 59
Query: 438 SSSADTTIRLWSTKLNANLVC-YKGHNYPVWDVQFNPQGHYFASSSHDRTARIW-SMDRI 495
S+S D T+ LWS N +L+ Y+GH+ + D+ ++ HY S+S D T RIW +
Sbjct: 60 SASVDKTMILWSAT-NYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPY 118
Query: 496 QPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAM 555
+ L+++ GH + V CV ++ N I +GS D+T+R+W+V +G+CVR+ H I S+
Sbjct: 119 ECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHF 178
Query: 556 SPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA-YSCEGSLLASGSADCTVK 614
+ DG + S DG+ +WD G C+ L+ S + A +S G + + D T+K
Sbjct: 179 NRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLK 238
Query: 615 LWDVTTSTKVLK 626
L + T K LK
Sbjct: 239 LSNYATG-KFLK 249
Score = 279 (103.3 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 59/205 (28%), Positives = 110/205 (53%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V+ +F+P + I+S S D TIR+W K + K H+ P+ V FN G
Sbjct: 125 RGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSL 184
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSD-VDCVRWHINCNYIATGSSDKTVRLWDVSS 536
S+SHD + +IW L+ + S V ++ N +I + D T++L + ++
Sbjct: 185 IVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYAT 244
Query: 537 GECVRIFIGHRSMILSL--AMS-PDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVW 593
G+ ++++ GH + + + A S +G+Y+ SG ED + +WDL + + L GHT V
Sbjct: 245 GKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVI 304
Query: 594 TLA-YSCEGSLLASGS-ADCTVKLW 616
+++ + + + +SG+ D T+++W
Sbjct: 305 SVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 279 (103.3 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 68/235 (28%), Positives = 121/235 (51%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNAN-LVCYKGHNYPVWDVQFNPQG 475
Y+GHS + ++S + S+S D T+R+W + L +GH V+ V FNP
Sbjct: 81 YEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPS 140
Query: 476 HYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS 535
+ S S D T RIW + + +R++ H + V ++ + + I + S D + ++WD
Sbjct: 141 NLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAK 200
Query: 536 SGECVRIFIGHRSMILSLA-MSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVW- 593
G C++ I +S +S A SP+G+++ D T+ + + A+G+ + GHT+ V+
Sbjct: 201 EGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFC 260
Query: 594 -TLAYSC-EGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKS 646
T A+S G + SGS D V LWD+ + +L+ E T+ + S+ P ++
Sbjct: 261 ITSAFSVTNGKYIVSGSEDNCVYLWDLQ-ARNILQRLE-GHTDAVISVSCHPVQN 313
Score = 205 (77.2 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 59/239 (24%), Positives = 109/239 (45%)
Query: 335 SSAALPSVSFYTFINTHNG----LNCASISQDGSLVAGGFSDSSLKVWDMAKLG----QQ 386
+S +P Y + T G ++C S DG+L+A D ++ +W +
Sbjct: 23 TSGNVPIYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYE 82
Query: 387 AVSSGLQG---ENDT----TPREDIIGPNGRKRS-YT---LYQGHSGPVYSASFSPLGDF 435
SSG+ +D+ + +D RS Y + +GH+ V+ +F+P +
Sbjct: 83 GHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNL 142
Query: 436 ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRI 495
I+S S D TIR+W K + K H+ P+ V FN G S+SHD + +IW
Sbjct: 143 IVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEG 202
Query: 496 QPLRIMAGHLSD-VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSL 553
L+ + S V ++ N +I + D T++L + ++G+ ++++ GH + + +
Sbjct: 203 TCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCI 261
Score = 145 (56.1 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 53/201 (26%), Positives = 83/201 (41%)
Query: 352 NGLNCASISQDGSLVAGGFSDSSLKVWD--------MAKLGQQAVSS---GLQGENDTTP 400
N + C + + +L+ G D ++++W+ M K +SS G +
Sbjct: 129 NFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSA 188
Query: 401 RED----IIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANL 456
D I TL S V A FSP G FIL ++ D+T++L + L
Sbjct: 189 SHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFL 248
Query: 457 VCYKGHNYPVWDVQ--FN-PQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW 513
Y GH V+ + F+ G Y S S D +W + L+ + GH V V
Sbjct: 249 KVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSC 308
Query: 514 HINCNYIATGSS--DKTVRLW 532
H N I++ + DKT+R+W
Sbjct: 309 HPVQNEISSSGNHLDKTIRIW 329
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 309 (113.8 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 70/241 (29%), Positives = 118/241 (48%)
Query: 380 MAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSS 439
+A+L ++ S G +G +ED + K T GH + S F P ++S+
Sbjct: 68 VAQLEEELNSGGGRGGGRGRGKEDALPRPPEKHILT---GHRNCINSVKFHPSFSLMVSA 124
Query: 440 SADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLR 499
S D TI++W + KGH V D+ F+ G+ AS S D T ++W ++
Sbjct: 125 SEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVK 184
Query: 500 IMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDG 559
+ GH +V CVR+ + + + + S DKT+++W+ ++G C++ +GH + + +S DG
Sbjct: 185 TLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDG 244
Query: 560 RYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCE------GSLLASGSADCTV 613
+AS D TI W++ G C+ H+ V LA+S GSLL++ V
Sbjct: 245 SCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTANIIDIPGSLLSTPEGKSKV 304
Query: 614 K 614
K
Sbjct: 305 K 305
Score = 256 (95.2 bits), Expect = 8.4e-19, Sum P(2) = 8.4e-19
Identities = 50/158 (31%), Positives = 85/158 (53%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH + V+F+P S+S D T ++W + + R + GH + V + + N +
Sbjct: 104 GHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLL 163
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+ S+D T++LWD + +CV+ GH + + +P G + S D TI +W+ A+G
Sbjct: 164 ASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGY 223
Query: 581 CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
C+ L+GH V + S +GS +AS S D T+K W++
Sbjct: 224 CIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNI 261
Score = 248 (92.4 bits), Expect = 8.1e-18, Sum P(2) = 8.1e-18
Identities = 76/295 (25%), Positives = 132/295 (44%)
Query: 341 SVSFYTFINTH-NGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT- 398
S F + H N + + G+L+A +D ++K+WD V + L G +
Sbjct: 137 SGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTY--DCVKT-LHGHDHNV 193
Query: 399 -----TPREDIIGPNGRKRSYTLYQ-----------GHSGPVYSASFSPLGDFILSSSAD 442
TP D + + R ++ +++ GH V + S G I S S D
Sbjct: 194 SCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSND 253
Query: 443 TTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMA 502
TI+ W+ L Y+ H++ V + F+ S T S + P
Sbjct: 254 QTIKTWNIVKGECLATYREHSHVVECLAFSTANIIDIPGSLLSTPEGKSKVKQGP----G 309
Query: 503 GHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYM 562
G+L C Y+ATGS DKT+++W++++G C+ +IGH + + ++ P G+++
Sbjct: 310 GNLVG--------QCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFL 361
Query: 563 ASGDEDGTIMMWDLASGRCVTPLM-GHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
S +D TI +WD+A GRC+ + HT + L + +A+G D +K+W
Sbjct: 362 LSVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVW 416
Score = 213 (80.0 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 56/203 (27%), Positives = 96/203 (47%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V F G+ + S SAD TI+LW + + GH++ V V+F P G
Sbjct: 145 KGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQ 204
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
SSS D+T ++W ++ + GH V + + + IA+ S+D+T++ W++ G
Sbjct: 205 LISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKG 264
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY 597
EC+ + H ++ LA S D G+++ + G+ L
Sbjct: 265 ECLATYREHSHVVECLAFSTANII----DIPGSLLSTPEGKSKVKQGPGGN------LVG 314
Query: 598 SCEGSLLASGSADCTVKLWDVTT 620
C LA+GS D T+K+W++ T
Sbjct: 315 QC--GYLATGSRDKTIKIWELAT 335
Score = 199 (75.1 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 39/121 (32%), Positives = 64/121 (52%)
Query: 500 IMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDG 559
I+ GH + ++ V++H + + + + S D T+++WD SGE R GH + + + G
Sbjct: 101 ILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTG 160
Query: 560 RYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVT 619
+AS D TI +WD + CV L GH V + ++ G L S S D T+K+W+
Sbjct: 161 NLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAA 220
Query: 620 T 620
T
Sbjct: 221 T 221
Score = 149 (57.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 32/101 (31%), Positives = 52/101 (51%)
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
Y A+ S D+T +IW + + L GH + V VR+H ++ + DKT+R+WD++
Sbjct: 318 YLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQ 377
Query: 537 GECVR-IFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
G C++ I H I L ++A+G D I +W L
Sbjct: 378 GRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKL 418
Score = 37 (18.1 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 65 ARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHC---FMDLVAK 107
++Y+ + + + T + LD+ K LL + I +DL AK
Sbjct: 22 SQYKSSFEEFKKETGTELDVKKKGLLEKKWTSVIRLQKKVLDLEAK 67
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 321 (118.1 bits), Expect = 4.7e-28, P = 4.7e-28
Identities = 66/215 (30%), Positives = 114/215 (53%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNP 473
YTL +GH + S FSP G ++ S+SAD TI++W +GH + D+ ++
Sbjct: 40 YTL-KGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQ 98
Query: 474 QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
S+S D+T +IW ++ + ++ + GH V V ++ N I +GS D+ VR+WD
Sbjct: 99 DSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWD 158
Query: 534 VSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSC-V 592
V++GEC ++ H + + + DG + SG DGT+ +WD +G+ + + V
Sbjct: 159 VNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEV 218
Query: 593 WTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
+ +S G + +G+ D T++LW + K LKT
Sbjct: 219 SFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKT 253
Score = 265 (98.3 bits), Expect = 5.4e-22, P = 5.4e-22
Identities = 63/206 (30%), Positives = 102/206 (49%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH V+ SF+P + I+S S D +R+W H+ PV V FN G
Sbjct: 127 KGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTL 186
Query: 478 FASSSHDRTARIWSMDRIQPLR-IMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
S S+D T RIW Q L I +V V++ N ++ G+ D T+RLW ++
Sbjct: 187 VVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNN 246
Query: 537 GE-CVRIFIGHRS---MILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCV 592
+ C++ + GH++ I S G+++ +G ED I +++L + V L GH V
Sbjct: 247 NKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVV 306
Query: 593 WTLAYSCEGSLLASGSA--DCTVKLW 616
T+A +++ASG+ D +VK+W
Sbjct: 307 LTVACHPTENIIASGALEKDRSVKIW 332
Score = 204 (76.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 46/166 (27%), Positives = 85/166 (51%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHN-YPVWDVQFNPQ 474
+ HS PV F+ G ++S S D T+R+W T L + V V+F+P
Sbjct: 167 MISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPN 226
Query: 475 GHYFASSSHDRTARIWSMDRIQP-LRIMAGHLSDVDCV--RWHINCN-YIATGSSDKTVR 530
G + + + D T R+WS + + L+ GH ++ C+ + + C +I TGS D +
Sbjct: 227 GKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIY 286
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASG--DEDGTIMMW 574
++++ + E V+ GH ++L++A P +ASG ++D ++ +W
Sbjct: 287 IYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
Score = 201 (75.8 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 55/221 (24%), Positives = 97/221 (43%)
Query: 345 YTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDM--AKLGQQAVSSGLQGENDTTPRE 402
YT ++ S DG +A +D ++K+W K ++ + +G +D +
Sbjct: 40 YTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKF-ERTLEGHKEGISDIAWSQ 98
Query: 403 D--IIGPNGRKRSYTLY-----------QGHSGPVYSASFSPLGDFILSSSADTTIRLWS 449
D +I ++ ++ +GH V+ SF+P + I+S S D +R+W
Sbjct: 99 DSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWD 158
Query: 450 TKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLR-IMAGHLSDV 508
H+ PV V FN G S S+D T RIW Q L I +V
Sbjct: 159 VNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEV 218
Query: 509 DCVRWHINCNYIATGSSDKTVRLWDVSSGE-CVRIFIGHRS 548
V++ N ++ G+ D T+RLW ++ + C++ + GH++
Sbjct: 219 SFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKN 259
Score = 135 (52.6 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 45/178 (25%), Positives = 81/178 (45%)
Query: 353 GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTT------PREDII- 405
G++ + SQD L+ D ++K+WD+ G+ + L+G + P+ ++I
Sbjct: 90 GISDIAWSQDSKLICSASDDKTIKIWDVES-GKMVKT--LKGHKEYVFGVSFNPQSNLIV 146
Query: 406 -GP-NGRKRSYTLYQG--------HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNAN 455
G + R + + G HS PV F+ G ++S S D T+R+W T
Sbjct: 147 SGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQL 206
Query: 456 LVCYKGHN-YPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQP-LRIMAGHLSDVDCV 511
L + V V+F+P G + + + D T R+WS + + L+ GH ++ C+
Sbjct: 207 LNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCI 264
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 341 (125.1 bits), Expect = 7.2e-28, P = 7.2e-28
Identities = 75/233 (32%), Positives = 119/233 (51%)
Query: 420 HSGPVYSASFSPL-GDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
HS V S G + + D + +W+ ++ GH V +QFN
Sbjct: 19 HSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERV 78
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
+ S + R+W ++ + LR + GH + + + +H Y+A+GS D ++LWDV
Sbjct: 79 VAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKG 138
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS 598
CV + GH + LA SPDG+++AS +D T+ +WDL +G+ +T HTS V + +
Sbjct: 139 CVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFH 198
Query: 599 CEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYS 651
LLASGSAD TVKLWD+ + +E ++G +RS+ P S +YS
Sbjct: 199 PNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGV--VRSVLFNPDGSC-LYS 248
Score = 272 (100.8 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 62/209 (29%), Positives = 105/209 (50%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH + S F P+G+++ S S D+ I+LW + + YKGH V + F+P G +
Sbjct: 103 GHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWL 162
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
AS+S D T ++W + + + H S V+ V++H N +A+GS+D+TV+LWD+
Sbjct: 163 ASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFN 222
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS 598
+ G ++ S+ +PDG + SG E+ T+ ++ RC + V LA S
Sbjct: 223 MIGSSEGETGVVRSVLFNPDGSCLYSGSEN-TLRVYGWEPDRCFDVVHVGWGKVSDLAIS 281
Query: 599 CEGSLLASGSADCTVKLWDVTTSTKVLKT 627
++A + V W V +V K+
Sbjct: 282 -NNQMIAVSYSHTNVS-WYVVDLNRVKKS 308
Score = 260 (96.6 bits), Expect = 6.4e-19, P = 6.4e-19
Identities = 56/198 (28%), Positives = 100/198 (50%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH+ V F+ + +++ S ++RLW + L GH + + F+P G Y
Sbjct: 61 GHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYL 120
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
AS S D ++W + R + GH V C+ + + ++A+ S D TV+LWD+ +G+
Sbjct: 121 ASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGK 180
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS 598
+ F H S + + P+ +ASG D T+ +WDL + G T V ++ ++
Sbjct: 181 MITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFN 240
Query: 599 CEGSLLASGSADCTVKLW 616
+GS L SGS + T++++
Sbjct: 241 PDGSCLYSGSEN-TLRVY 257
Score = 177 (67.4 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 63/241 (26%), Positives = 112/241 (46%)
Query: 331 RVHLSSAALPSVSFYTFINTHNGLNCASI-SQDGSLVAGGFSDSSLKVWDM--AKL---- 383
RV++ + + P+ +T + + C S + +VAG S SL++WD+ AK+
Sbjct: 44 RVNIWAVSKPNCIMSLTGHT-SAVGCIQFNSSEERVVAGSLS-GSLRLWDLEAAKILRTL 101
Query: 384 -GQQAVSSGLQ----GENDTTPREDI---IGPNGRKRSYTLYQGHSGPVYSASFSPLGDF 435
G +A S L GE + D + RK Y+GH+ V +FSP G +
Sbjct: 102 MGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKW 161
Query: 436 ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRI 495
+ S+S D+T++LW + + H V VQF+P + AS S DRT ++W +++
Sbjct: 162 LASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKF 221
Query: 496 QPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAM 555
+ G V V ++ + + + +GS + T+R++ C + + LA+
Sbjct: 222 NMIGSSEGETGVVRSVLFNPDGSCLYSGS-ENTLRVYGWEPDRCFDVVHVGWGKVSDLAI 280
Query: 556 S 556
S
Sbjct: 281 S 281
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 316 (116.3 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 66/207 (31%), Positives = 106/207 (51%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
R+Y L GH V FSP G + S S D T+ LW + +K H V V F
Sbjct: 54 RAYCLV-GHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHF 112
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+ G ++S D+T ++W++ R + L ++ H++ V C R+ + IA+ S DKTV+L
Sbjct: 113 SSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKL 172
Query: 532 WDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSC 591
WD +S EC+ F H + P G +A+ D T+ +WD+ R + HT+
Sbjct: 173 WDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAA 232
Query: 592 VWTLAYSCEGSLLASGSADCTVKLWDV 618
V +L++ G+ L + S D T+K+ D+
Sbjct: 233 VNSLSFHPSGNYLITASNDSTLKILDL 259
Score = 289 (106.8 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 61/202 (30%), Positives = 95/202 (47%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
++GH + S FS + S S D+ +++WS K C GH V VQF+P GH
Sbjct: 16 FRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGH 75
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
AS S D+T +W + H + V V + + + T S DKT+++W V
Sbjct: 76 LVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHR 135
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+ + H + + SPDGR +AS +D T+ +WD S C+ H +
Sbjct: 136 QKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVE 195
Query: 597 YSCEGSLLASGSADCTVKLWDV 618
+ G+ +A+ D TVK+WDV
Sbjct: 196 FHPSGTCIAAAGTDKTVKVWDV 217
Score = 239 (89.2 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 65/250 (26%), Positives = 116/250 (46%)
Query: 340 PSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQ-----------QAV 388
P + Y + + + C S G LVA G D ++ +W + G+ ++V
Sbjct: 51 PQMRAYCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSV 110
Query: 389 SSGLQGENDTTPRED----IIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
G++ T +D + + +K ++L Q H V A FSP G I S+S D T
Sbjct: 111 HFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQ-HINWVRCARFSPDGRLIASASDDKT 169
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
++LW + + H V+F+P G A++ D+T ++W + + L+ H
Sbjct: 170 VKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVH 229
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
+ V+ + +H + NY+ T S+D T+++ D+ G + GH+ +A S G + AS
Sbjct: 230 TAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFAS 289
Query: 565 GDEDGTIMMW 574
G D +M+W
Sbjct: 290 GGSDEQVMVW 299
Score = 236 (88.1 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 56/163 (34%), Positives = 85/163 (52%)
Query: 459 YKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCN 518
++GH + V F+ AS S D +IWSM + GH V CV++ + +
Sbjct: 16 FRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGH 75
Query: 519 YIATGSSDKTVRLWDVS-SGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA 577
+A+GS DKTV LW S GE +F H + + S+ S DG+ + + +D TI +W +
Sbjct: 76 LVASGSRDKTVCLWVPSVKGEST-VFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVH 134
Query: 578 SGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+ + L H + V +S +G L+AS S D TVKLWD T+
Sbjct: 135 RQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTS 177
Score = 172 (65.6 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 35/121 (28%), Positives = 60/121 (49%)
Query: 499 RIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPD 558
R GH + V + +N +A+GS D +++W + +GH+ ++ + SP
Sbjct: 14 RHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPS 73
Query: 559 GRYMASGDEDGTIMMW-DLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
G +ASG D T+ +W G T HT+ V ++ +S +G L + S D T+K+W
Sbjct: 74 GHLVASGSRDKTVCLWVPSVKGES-TVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWT 132
Query: 618 V 618
V
Sbjct: 133 V 133
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 316 (116.3 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 63/209 (30%), Positives = 109/209 (52%)
Query: 410 RKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
+ R+Y + GH V +FSP G + S S D T+R+W + ++ H V V
Sbjct: 82 QSRAYR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSV 140
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
F G F ++S D+T ++WS R + L ++ H++ V C ++ + I + S DKTV
Sbjct: 141 HFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTV 200
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
+LWD +S ECV + H + + P G +A+ D T+ +WD+ + R + H+
Sbjct: 201 KLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHS 260
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLWDV 618
+ V L++ G+ L + S+D T+K+ D+
Sbjct: 261 AAVNALSFHPSGNYLVTASSDSTLKILDL 289
Score = 279 (103.3 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 81/292 (27%), Positives = 129/292 (44%)
Query: 340 PSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQ--------QAVS-- 389
PS+ + F + + C S + +A G DS L VW M + AV+
Sbjct: 40 PSLERH-FKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCV 98
Query: 390 ----SG-LQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
SG L I PN + S T+++ H+ V S F G +++S D T
Sbjct: 99 NFSPSGHLLASGSRDKTVRIWVPNIKGES-TVFRAHTATVRSVHFCSDGQSFVTASDDKT 157
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
I++WST L H V +F+P G S+S D+T ++W + + H
Sbjct: 158 IKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 217
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
V V +H + +A D TV++WDV + ++ + H + + +L+ P G Y+ +
Sbjct: 218 GGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVT 277
Query: 565 GDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
D T+ + DL GR + L GH T+A+S G ASG +D V +W
Sbjct: 278 ASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 271 (100.5 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 61/204 (29%), Positives = 93/204 (45%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
++GH V FS + S S D+ + +W K + + GH V V F+P GH
Sbjct: 46 FKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 105
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
AS S D+T RIW + + H + V V + + T S DKT+++W
Sbjct: 106 LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 165
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+ + H + + SPDGR + S +D T+ +WD S CV H V +
Sbjct: 166 QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 225
Query: 597 YSCEGSLLASGSADCTVKLWDVTT 620
+ G+ +A+ D TVK+WDV T
Sbjct: 226 FHPSGTCVAAAGMDNTVKVWDVRT 249
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 300 (110.7 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 69/218 (31%), Positives = 108/218 (49%)
Query: 385 QQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
++ S G G+ P+E I P Y L GH PV F P+ ++S+S D T
Sbjct: 77 EEFTSGGPLGQK-RDPKEWIPRP---PEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDAT 131
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
I++W + KGH V D+ F+ G AS S D T ++W + +R M GH
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
+V V N ++I + S DKT+++W+V +G CV+ F GHR + + + DG +AS
Sbjct: 192 DHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251
Query: 565 GDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS 602
D T+ +W +A+ C L H V ++++ E S
Sbjct: 252 CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289
Score = 272 (100.8 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22
Identities = 60/186 (32%), Positives = 96/186 (51%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH PV V F+P S+S D T ++W + R + GH V + + + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+ S+D T++LWD EC+R GH + S+A+ P+G ++ S D TI MW++ +G
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 581 CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLK 640
CV GH V + + +G+L+AS S D TV++W V +TK K E + + + +
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV--ATKECKAELREHEHVVECIS 283
Query: 641 TLPTKS 646
P S
Sbjct: 284 WAPESS 289
Score = 214 (80.4 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 66/229 (28%), Positives = 105/229 (45%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH V S + P GD I+S+S D TI++W + + + GH V V+ N G
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 249
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY--IATGSSDKTVRLWDVSS 536
AS S+D+T R+W + + + H V+C+ W +Y I+ + +T + S
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK-----S 304
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
G+ P G ++ SG D TI MWD+++G C+ L+GH + V +
Sbjct: 305 GK------------------P-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL 345
Query: 597 YSCEGSLLASGSADCTVKLWDVTTST--KVLKTEEKSGTNRLRSLKTLP 643
+ G + S + D T+++WD K L E T+ L KT P
Sbjct: 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS-LDFHKTAP 393
Score = 201 (75.8 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 45/153 (29%), Positives = 78/153 (50%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V SF G + S SAD TI+LW + + GH++ V V P G +
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
S+S D+T ++W + ++ GH V VR + + IA+ S+D+TVR+W V++
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT 570
EC H ++ ++ +P+ Y + + G+
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSSISEATGS 299
Score = 192 (72.6 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 68/278 (24%), Positives = 118/278 (42%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNG-----RKR 412
S G L+A +D ++K+WD G + + + + G + I+ PNG R
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDFQ--GFECIRT-MHGHDHNVSSVAIM-PNGDHIVSASR 212
Query: 413 SYTL-------------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
T+ + GH V + G I S S D T+R+W
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
+ H + V + + P+ Y SS + T S + +G +
Sbjct: 273 REHEHVVECISWAPESSY--SSISEATG---SETK------KSGKPGP-----------F 310
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
+ +GS DKT+++WDVS+G C+ +GH + + + G+++ S +D T+ +WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 580 RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
RC+ L H V +L + + +GS D TVK+W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 189 (71.6 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 37/120 (30%), Positives = 62/120 (51%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
++GH S V V +H + + + S D T+++WD +G+ R GH + ++ G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+AS D TI +WD C+ + GH V ++A G + S S D T+K+W+V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Score = 188 (71.2 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 51/188 (27%), Positives = 88/188 (46%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A + + L+ E++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT---KECKAELR-EHEHVVECISW 284
Query: 406 GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
P SY+ +G S P G F+LS S D TI++W L+ GH+
Sbjct: 285 APES---SYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
V V F+ G + S + D+T R+W + ++ + H V + +H Y+ TGS
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 526 DKTVRLWD 533
D+TV++W+
Sbjct: 401 DQTVKVWE 408
Score = 48 (22.0 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 4 LQVVEFVATYLKKKGFSEAENAL--QAEIQRNK 34
+Q+ +A YL+ G+ EA + +AE+ N+
Sbjct: 9 VQINRAIADYLRSNGYEEAYSVFKKEAELDMNE 41
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 315 (115.9 bits), Expect = 2.1e-27, P = 2.1e-27
Identities = 63/207 (30%), Positives = 108/207 (52%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
R+Y + GH V +FSP G + S S D T+R+W + ++ H V V F
Sbjct: 53 RAYR-FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHF 111
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
G F ++S D+T ++WS R + L ++ H++ V C ++ + I + S DKTV+L
Sbjct: 112 CSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKL 171
Query: 532 WDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSC 591
WD +S ECV + H + + P G +A+ D T+ +WD+ + R + H++
Sbjct: 172 WDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAA 231
Query: 592 VWTLAYSCEGSLLASGSADCTVKLWDV 618
V L++ G+ L + S+D T+K+ D+
Sbjct: 232 VNALSFHPSGNYLVTASSDSTLKILDL 258
Score = 279 (103.3 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 63/204 (30%), Positives = 93/204 (45%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
++GH V S FS + S S D+ + +W K + GH V V F+P GH
Sbjct: 15 FKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGH 74
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
AS S D+T RIW + + H + V V + + T S DKTV++W
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHR 134
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+ + H + + SPDGR + S +D T+ +WD S CV H V +
Sbjct: 135 QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 194
Query: 597 YSCEGSLLASGSADCTVKLWDVTT 620
+ G+ +A+ D TVK+WDV T
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWDVRT 218
Score = 273 (101.2 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 62/210 (29%), Positives = 102/210 (48%)
Query: 407 PNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPV 466
PN + S T+++ H+ V S F G +++S D T+++WST L H V
Sbjct: 90 PNVKGES-TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWV 148
Query: 467 WDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSD 526
+F+P G S+S D+T ++W + + H V V +H + IA D
Sbjct: 149 RCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMD 208
Query: 527 KTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLM 586
TV++WDV + ++ + H + + +L+ P G Y+ + D T+ + DL GR + L
Sbjct: 209 NTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLH 268
Query: 587 GHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
GH T+A+S G ASG +D V +W
Sbjct: 269 GHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 264 (98.0 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 69/250 (27%), Positives = 115/250 (46%)
Query: 340 PSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSG-------- 391
P Y F + + C + S G L+A G D ++++W G+ V
Sbjct: 50 PQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 109
Query: 392 ---LQGENDTTPRED----IIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
G++ T +D + + +K ++L Q H V A FSP G I+S+S D T
Sbjct: 110 HFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQ-HINWVRCAKFSPDGRLIVSASDDKT 168
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
++LW + Y H V V F+P G A++ D T ++W + + L+ H
Sbjct: 169 VKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLH 228
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
+ V+ + +H + NY+ T SSD T+++ D+ G + GH+ ++A S G Y AS
Sbjct: 229 SAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 288
Query: 565 GDEDGTIMMW 574
G D +M+W
Sbjct: 289 GGSDEQVMVW 298
Score = 155 (59.6 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 35/119 (29%), Positives = 55/119 (46%)
Query: 499 RIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPD 558
R GH V V + +N +A+GS D + +W + F GH+ + + SP
Sbjct: 13 RHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPS 72
Query: 559 GRYMASGDEDGTIMMW-DLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
G +ASG D T+ +W G T HT+ V ++ + +G + S D TVK+W
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGES-TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 300 (110.7 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 70/213 (32%), Positives = 108/213 (50%)
Query: 400 PREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
P+E I P Y L GH PV F P+ I+S+S D TI++W +
Sbjct: 91 PKEWIPRP---PEKYAL-SGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTL 146
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
KGH V D+ F+ G AS S D T ++W + +R M GH +V V N ++
Sbjct: 147 KGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
I + S DKT+++W+V++G CV+ F GHR + + + DG +AS D T+ +W +A+
Sbjct: 207 IVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATK 266
Query: 580 RCVTPLMGHTSCVWTLAYSCEGS----LLASGS 608
C L H V ++++ E + L A+GS
Sbjct: 267 ECKAELREHEHVVECISWAPESAHPTILEATGS 299
Score = 280 (103.6 bits), Expect = 4.5e-23, Sum P(2) = 4.5e-23
Identities = 61/188 (32%), Positives = 97/188 (51%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH PV V F+P S+S D T ++W + R + GH V + + +
Sbjct: 106 GHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLL 165
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+ S+D T++LWD EC+R GH + S+A+ P+G ++ S D TI MW++A+G
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGY 225
Query: 581 CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLK 640
CV GH V + + +G+L+AS S D TV++W V +TK K E + + + +
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVV--ATKECKAELREHEHVVECIS 283
Query: 641 TLPTKSTP 648
P + P
Sbjct: 284 WAPESAHP 291
Score = 214 (80.4 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 67/227 (29%), Positives = 103/227 (45%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH V S + P GD I+S+S D TI++W + + GH V V+ N G
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLI 249
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
ASSS+D+T R+W + + + H V+C+ W A S+ T+ + + E
Sbjct: 250 ASSSNDQTVRVWVVATKECKAELREHEHVVECISW-------APESAHPTIL--EATGSE 300
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS 598
+ + P G ++ SG D TI MWD++ G C+ L+GH + V +
Sbjct: 301 TKK------------SGKP-GPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVH 347
Query: 599 CEGSLLASGSADCTVKLWDVTTS--TKVLKTEEKSGTNRLRSLKTLP 643
G + S + D T+++WD TK L E T+ L KT P
Sbjct: 348 PGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTS-LDFHKTAP 393
Score = 199 (75.1 bits), Expect = 6.5e-14, Sum P(3) = 6.5e-14
Identities = 34/99 (34%), Positives = 58/99 (58%)
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
++ +GS DKT+++WDVS G C+ +GH + + + + P G+Y+ S +D T+ +WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKN 369
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
RC L H V +L + + +GS D TVK+W+
Sbjct: 370 KRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 194 (73.4 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 51/188 (27%), Positives = 87/188 (46%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A + + L+ + I
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVAT---KECKAELREHEHVV---ECI 282
Query: 406 GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
T+ + +G S P G F+LS S D TI++W + L+ GH+
Sbjct: 283 SWAPESAHPTILEA-TGSETKKSGKP-GPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNW 340
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
V V +P G Y S + D+T RIW + + ++ H V + +H Y+ TGS
Sbjct: 341 VRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 526 DKTVRLWD 533
D+TV++W+
Sbjct: 401 DQTVKVWE 408
Score = 190 (71.9 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 38/120 (31%), Positives = 62/120 (51%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
++GH S V V +H + I + S D T+++WD +G+ R GH + ++ G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+AS D TI +WD C+ + GH V ++A G + S S D T+K+W+V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVAT 223
Score = 147 (56.8 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
Identities = 29/101 (28%), Positives = 48/101 (47%)
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDV 534
G + S S D+T ++W + L + GH + V V H YI + + DKT+R+WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDY 367
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWD 575
+ C + H + SL Y+ +G D T+ +W+
Sbjct: 368 KNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 46 (21.3 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 2 DELQVVEFVATYLKKKGFSEAENAL--QAEIQRNK 34
DEL +A YL+ G+ EA + +AE+ N+
Sbjct: 9 DELN--RAIADYLRSNGYEEAYSVFKKEAELDMNE 41
Score = 46 (21.3 bits), Expect = 6.5e-14, Sum P(3) = 6.5e-14
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 351 HNGLNCASISQDGSLVAGGFSDSSLKVWDMA 381
HN ++ +I +G + D ++K+W++A
Sbjct: 193 HN-VSSVAIMPNGDHIVSASRDKTIKMWEVA 222
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 300 (110.7 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 69/218 (31%), Positives = 108/218 (49%)
Query: 385 QQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
++ S G G+ P+E I P Y L GH PV F P+ ++S+S D T
Sbjct: 77 EEFTSGGPLGQK-RDPKEWIPRP---PEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDAT 131
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
I++W + KGH V D+ F+ G AS S D T ++W + +R M GH
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
+V V N ++I + S DKT+++W+V +G CV+ F GHR + + + DG +AS
Sbjct: 192 DHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251
Query: 565 GDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS 602
D T+ +W +A+ C L H V ++++ E S
Sbjct: 252 CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289
Score = 272 (100.8 bits), Expect = 6.1e-22, Sum P(2) = 6.1e-22
Identities = 60/186 (32%), Positives = 96/186 (51%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH PV V F+P S+S D T ++W + R + GH V + + + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+ S+D T++LWD EC+R GH + S+A+ P+G ++ S D TI MW++ +G
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 581 CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLK 640
CV GH V + + +G+L+AS S D TV++W V +TK K E + + + +
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV--ATKECKAELREHEHVVECIS 283
Query: 641 TLPTKS 646
P S
Sbjct: 284 WAPESS 289
Score = 214 (80.4 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 66/229 (28%), Positives = 105/229 (45%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH V S + P GD I+S+S D TI++W + + + GH V V+ N G
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 249
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY--IATGSSDKTVRLWDVSS 536
AS S+D+T R+W + + + H V+C+ W +Y I+ + +T + S
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK-----S 304
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
G+ P G ++ SG D TI MWD+++G C+ L+GH + V +
Sbjct: 305 GK------------------P-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL 345
Query: 597 YSCEGSLLASGSADCTVKLWDVTTST--KVLKTEEKSGTNRLRSLKTLP 643
+ G + S + D T+++WD K L E T+ L KT P
Sbjct: 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS-LDFHKTAP 393
Score = 201 (75.8 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 45/153 (29%), Positives = 78/153 (50%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V SF G + S SAD TI+LW + + GH++ V V P G +
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
S+S D+T ++W + ++ GH V VR + + IA+ S+D+TVR+W V++
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT 570
EC H ++ ++ +P+ Y + + G+
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSSISEATGS 299
Score = 192 (72.6 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 68/278 (24%), Positives = 118/278 (42%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNG-----RKR 412
S G L+A +D ++K+WD G + + + + G + I+ PNG R
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDFQ--GFECIRT-MHGHDHNVSSVAIM-PNGDHIVSASR 212
Query: 413 SYTL-------------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
T+ + GH V + G I S S D T+R+W
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
+ H + V + + P+ Y SS + T S + +G +
Sbjct: 273 REHEHVVECISWAPESSY--SSISEATG---SETK------KSGKPGP-----------F 310
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
+ +GS DKT+++WDVS+G C+ +GH + + + G+++ S +D T+ +WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 580 RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
RC+ L H V +L + + +GS D TVK+W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 189 (71.6 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 37/120 (30%), Positives = 62/120 (51%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
++GH S V V +H + + + S D T+++WD +G+ R GH + ++ G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+AS D TI +WD C+ + GH V ++A G + S S D T+K+W+V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Score = 188 (71.2 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 51/188 (27%), Positives = 88/188 (46%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A + + L+ E++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT---KECKAELR-EHEHVVECISW 284
Query: 406 GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
P SY+ +G S P G F+LS S D TI++W L+ GH+
Sbjct: 285 APES---SYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
V V F+ G + S + D+T R+W + ++ + H V + +H Y+ TGS
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 526 DKTVRLWD 533
D+TV++W+
Sbjct: 401 DQTVKVWE 408
Score = 46 (21.3 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 2 DELQVVEFVATYLKKKGFSEAENAL--QAEIQRNK 34
DEL +A YL+ G+ EA + +AE+ N+
Sbjct: 9 DELN--RAIADYLRSNGYEEAYSVFKKEAELDMNE 41
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 300 (110.7 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 69/218 (31%), Positives = 108/218 (49%)
Query: 385 QQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
++ S G G+ P+E I P Y L GH PV F P+ ++S+S D T
Sbjct: 77 EEFTSGGPLGQK-RDPKEWIPRP---PEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDAT 131
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
I++W + KGH V D+ F+ G AS S D T ++W + +R M GH
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
+V V N ++I + S DKT+++W+V +G CV+ F GHR + + + DG +AS
Sbjct: 192 DHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251
Query: 565 GDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS 602
D T+ +W +A+ C L H V ++++ E S
Sbjct: 252 CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289
Score = 272 (100.8 bits), Expect = 6.1e-22, Sum P(2) = 6.1e-22
Identities = 60/186 (32%), Positives = 96/186 (51%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH PV V F+P S+S D T ++W + R + GH V + + + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+ S+D T++LWD EC+R GH + S+A+ P+G ++ S D TI MW++ +G
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 581 CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLK 640
CV GH V + + +G+L+AS S D TV++W V +TK K E + + + +
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV--ATKECKAELREHEHVVECIS 283
Query: 641 TLPTKS 646
P S
Sbjct: 284 WAPESS 289
Score = 214 (80.4 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 66/229 (28%), Positives = 105/229 (45%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH V S + P GD I+S+S D TI++W + + + GH V V+ N G
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 249
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY--IATGSSDKTVRLWDVSS 536
AS S+D+T R+W + + + H V+C+ W +Y I+ + +T + S
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK-----S 304
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
G+ P G ++ SG D TI MWD+++G C+ L+GH + V +
Sbjct: 305 GK------------------P-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL 345
Query: 597 YSCEGSLLASGSADCTVKLWDVTTST--KVLKTEEKSGTNRLRSLKTLP 643
+ G + S + D T+++WD K L E T+ L KT P
Sbjct: 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS-LDFHKTAP 393
Score = 201 (75.8 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 45/153 (29%), Positives = 78/153 (50%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V SF G + S SAD TI+LW + + GH++ V V P G +
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
S+S D+T ++W + ++ GH V VR + + IA+ S+D+TVR+W V++
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT 570
EC H ++ ++ +P+ Y + + G+
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSSISEATGS 299
Score = 192 (72.6 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 68/278 (24%), Positives = 118/278 (42%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNG-----RKR 412
S G L+A +D ++K+WD G + + + + G + I+ PNG R
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDFQ--GFECIRT-MHGHDHNVSSVAIM-PNGDHIVSASR 212
Query: 413 SYTL-------------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
T+ + GH V + G I S S D T+R+W
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
+ H + V + + P+ Y SS + T S + +G +
Sbjct: 273 REHEHVVECISWAPESSY--SSISEATG---SETK------KSGKPGP-----------F 310
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
+ +GS DKT+++WDVS+G C+ +GH + + + G+++ S +D T+ +WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 580 RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
RC+ L H V +L + + +GS D TVK+W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 189 (71.6 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 37/120 (30%), Positives = 62/120 (51%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
++GH S V V +H + + + S D T+++WD +G+ R GH + ++ G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+AS D TI +WD C+ + GH V ++A G + S S D T+K+W+V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Score = 188 (71.2 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 51/188 (27%), Positives = 88/188 (46%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A + + L+ E++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT---KECKAELR-EHEHVVECISW 284
Query: 406 GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
P SY+ +G S P G F+LS S D TI++W L+ GH+
Sbjct: 285 APES---SYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
V V F+ G + S + D+T R+W + ++ + H V + +H Y+ TGS
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 526 DKTVRLWD 533
D+TV++W+
Sbjct: 401 DQTVKVWE 408
Score = 46 (21.3 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 2 DELQVVEFVATYLKKKGFSEAENAL--QAEIQRNK 34
DEL +A YL+ G+ EA + +AE+ N+
Sbjct: 9 DELN--RAIADYLRSNGYEEAYSVFKKEAELDMNE 41
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 300 (110.7 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 69/218 (31%), Positives = 108/218 (49%)
Query: 385 QQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
++ S G G+ P+E I P Y L GH PV F P+ ++S+S D T
Sbjct: 77 EEFTSGGPLGQK-RDPKEWIPRP---PEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDAT 131
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
I++W + KGH V D+ F+ G AS S D T ++W + +R M GH
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
+V V N ++I + S DKT+++W+V +G CV+ F GHR + + + DG +AS
Sbjct: 192 DHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251
Query: 565 GDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS 602
D T+ +W +A+ C L H V ++++ E S
Sbjct: 252 CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289
Score = 272 (100.8 bits), Expect = 6.1e-22, Sum P(2) = 6.1e-22
Identities = 60/186 (32%), Positives = 96/186 (51%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH PV V F+P S+S D T ++W + R + GH V + + + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+ S+D T++LWD EC+R GH + S+A+ P+G ++ S D TI MW++ +G
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 581 CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLK 640
CV GH V + + +G+L+AS S D TV++W V +TK K E + + + +
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV--ATKECKAELREHEHVVECIS 283
Query: 641 TLPTKS 646
P S
Sbjct: 284 WAPESS 289
Score = 214 (80.4 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 66/229 (28%), Positives = 105/229 (45%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH V S + P GD I+S+S D TI++W + + + GH V V+ N G
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 249
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY--IATGSSDKTVRLWDVSS 536
AS S+D+T R+W + + + H V+C+ W +Y I+ + +T + S
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK-----S 304
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
G+ P G ++ SG D TI MWD+++G C+ L+GH + V +
Sbjct: 305 GK------------------P-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL 345
Query: 597 YSCEGSLLASGSADCTVKLWDVTTST--KVLKTEEKSGTNRLRSLKTLP 643
+ G + S + D T+++WD K L E T+ L KT P
Sbjct: 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS-LDFHKTAP 393
Score = 201 (75.8 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 45/153 (29%), Positives = 78/153 (50%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V SF G + S SAD TI+LW + + GH++ V V P G +
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
S+S D+T ++W + ++ GH V VR + + IA+ S+D+TVR+W V++
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT 570
EC H ++ ++ +P+ Y + + G+
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSSISEATGS 299
Score = 192 (72.6 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 68/278 (24%), Positives = 118/278 (42%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNG-----RKR 412
S G L+A +D ++K+WD G + + + + G + I+ PNG R
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDFQ--GFECIRT-MHGHDHNVSSVAIM-PNGDHIVSASR 212
Query: 413 SYTL-------------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
T+ + GH V + G I S S D T+R+W
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
+ H + V + + P+ Y SS + T S + +G +
Sbjct: 273 REHEHVVECISWAPESSY--SSISEATG---SETK------KSGKPGP-----------F 310
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
+ +GS DKT+++WDVS+G C+ +GH + + + G+++ S +D T+ +WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 580 RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
RC+ L H V +L + + +GS D TVK+W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 189 (71.6 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 37/120 (30%), Positives = 62/120 (51%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
++GH S V V +H + + + S D T+++WD +G+ R GH + ++ G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+AS D TI +WD C+ + GH V ++A G + S S D T+K+W+V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Score = 188 (71.2 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 51/188 (27%), Positives = 88/188 (46%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A + + L+ E++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT---KECKAELR-EHEHVVECISW 284
Query: 406 GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
P SY+ +G S P G F+LS S D TI++W L+ GH+
Sbjct: 285 APES---SYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
V V F+ G + S + D+T R+W + ++ + H V + +H Y+ TGS
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 526 DKTVRLWD 533
D+TV++W+
Sbjct: 401 DQTVKVWE 408
Score = 46 (21.3 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 2 DELQVVEFVATYLKKKGFSEAENAL--QAEIQRNK 34
DEL +A YL+ G+ EA + +AE+ N+
Sbjct: 9 DELN--RAIADYLRSNGYEEAYSVFKKEAELDMNE 41
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 300 (110.7 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 69/218 (31%), Positives = 108/218 (49%)
Query: 385 QQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
++ S G G+ P+E I P Y L GH PV F P+ ++S+S D T
Sbjct: 77 EEFTSGGPLGQK-RDPKEWIPRP---PEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDAT 131
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
I++W + KGH V D+ F+ G AS S D T ++W + +R M GH
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
+V V N ++I + S DKT+++W+V +G CV+ F GHR + + + DG +AS
Sbjct: 192 DHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251
Query: 565 GDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS 602
D T+ +W +A+ C L H V ++++ E S
Sbjct: 252 CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289
Score = 272 (100.8 bits), Expect = 6.1e-22, Sum P(2) = 6.1e-22
Identities = 60/186 (32%), Positives = 96/186 (51%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH PV V F+P S+S D T ++W + R + GH V + + + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+ S+D T++LWD EC+R GH + S+A+ P+G ++ S D TI MW++ +G
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 581 CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLK 640
CV GH V + + +G+L+AS S D TV++W V +TK K E + + + +
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV--ATKECKAELREHEHVVECIS 283
Query: 641 TLPTKS 646
P S
Sbjct: 284 WAPESS 289
Score = 214 (80.4 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 66/229 (28%), Positives = 105/229 (45%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH V S + P GD I+S+S D TI++W + + + GH V V+ N G
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 249
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY--IATGSSDKTVRLWDVSS 536
AS S+D+T R+W + + + H V+C+ W +Y I+ + +T + S
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK-----S 304
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
G+ P G ++ SG D TI MWD+++G C+ L+GH + V +
Sbjct: 305 GK------------------P-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL 345
Query: 597 YSCEGSLLASGSADCTVKLWDVTTST--KVLKTEEKSGTNRLRSLKTLP 643
+ G + S + D T+++WD K L E T+ L KT P
Sbjct: 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS-LDFHKTAP 393
Score = 201 (75.8 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 45/153 (29%), Positives = 78/153 (50%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V SF G + S SAD TI+LW + + GH++ V V P G +
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
S+S D+T ++W + ++ GH V VR + + IA+ S+D+TVR+W V++
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT 570
EC H ++ ++ +P+ Y + + G+
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSSISEATGS 299
Score = 192 (72.6 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 68/278 (24%), Positives = 118/278 (42%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNG-----RKR 412
S G L+A +D ++K+WD G + + + + G + I+ PNG R
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDFQ--GFECIRT-MHGHDHNVSSVAIM-PNGDHIVSASR 212
Query: 413 SYTL-------------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
T+ + GH V + G I S S D T+R+W
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
+ H + V + + P+ Y SS + T S + +G +
Sbjct: 273 REHEHVVECISWAPESSY--SSISEATG---SETK------KSGKPGP-----------F 310
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
+ +GS DKT+++WDVS+G C+ +GH + + + G+++ S +D T+ +WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 580 RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
RC+ L H V +L + + +GS D TVK+W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 189 (71.6 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 37/120 (30%), Positives = 62/120 (51%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
++GH S V V +H + + + S D T+++WD +G+ R GH + ++ G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+AS D TI +WD C+ + GH V ++A G + S S D T+K+W+V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Score = 188 (71.2 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 51/188 (27%), Positives = 88/188 (46%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A + + L+ E++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT---KECKAELR-EHEHVVECISW 284
Query: 406 GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
P SY+ +G S P G F+LS S D TI++W L+ GH+
Sbjct: 285 APES---SYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
V V F+ G + S + D+T R+W + ++ + H V + +H Y+ TGS
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 526 DKTVRLWD 533
D+TV++W+
Sbjct: 401 DQTVKVWE 408
Score = 46 (21.3 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 2 DELQVVEFVATYLKKKGFSEAENAL--QAEIQRNK 34
DEL +A YL+ G+ EA + +AE+ N+
Sbjct: 9 DELN--RAIADYLRSNGYEEAYSVFKKEAELDMNE 41
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 300 (110.7 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 69/218 (31%), Positives = 108/218 (49%)
Query: 385 QQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
++ S G G+ P+E I P Y L GH PV F P+ ++S+S D T
Sbjct: 77 EEFTSGGPLGQK-RDPKEWIPRP---PEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDAT 131
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
I++W + KGH V D+ F+ G AS S D T ++W + +R M GH
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
+V V N ++I + S DKT+++W+V +G CV+ F GHR + + + DG +AS
Sbjct: 192 DHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251
Query: 565 GDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS 602
D T+ +W +A+ C L H V ++++ E S
Sbjct: 252 CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289
Score = 272 (100.8 bits), Expect = 6.1e-22, Sum P(2) = 6.1e-22
Identities = 60/186 (32%), Positives = 96/186 (51%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH PV V F+P S+S D T ++W + R + GH V + + + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+ S+D T++LWD EC+R GH + S+A+ P+G ++ S D TI MW++ +G
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 581 CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLK 640
CV GH V + + +G+L+AS S D TV++W V +TK K E + + + +
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV--ATKECKAELREHEHVVECIS 283
Query: 641 TLPTKS 646
P S
Sbjct: 284 WAPESS 289
Score = 214 (80.4 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 66/229 (28%), Positives = 105/229 (45%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH V S + P GD I+S+S D TI++W + + + GH V V+ N G
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 249
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY--IATGSSDKTVRLWDVSS 536
AS S+D+T R+W + + + H V+C+ W +Y I+ + +T + S
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK-----S 304
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
G+ P G ++ SG D TI MWD+++G C+ L+GH + V +
Sbjct: 305 GK------------------P-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL 345
Query: 597 YSCEGSLLASGSADCTVKLWDVTTST--KVLKTEEKSGTNRLRSLKTLP 643
+ G + S + D T+++WD K L E T+ L KT P
Sbjct: 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS-LDFHKTAP 393
Score = 201 (75.8 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 45/153 (29%), Positives = 78/153 (50%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V SF G + S SAD TI+LW + + GH++ V V P G +
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
S+S D+T ++W + ++ GH V VR + + IA+ S+D+TVR+W V++
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT 570
EC H ++ ++ +P+ Y + + G+
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSSISEATGS 299
Score = 192 (72.6 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 68/278 (24%), Positives = 118/278 (42%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNG-----RKR 412
S G L+A +D ++K+WD G + + + + G + I+ PNG R
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDFQ--GFECIRT-MHGHDHNVSSVAIM-PNGDHIVSASR 212
Query: 413 SYTL-------------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
T+ + GH V + G I S S D T+R+W
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
+ H + V + + P+ Y SS + T S + +G +
Sbjct: 273 REHEHVVECISWAPESSY--SSISEATG---SETK------KSGKPGP-----------F 310
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
+ +GS DKT+++WDVS+G C+ +GH + + + G+++ S +D T+ +WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 580 RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
RC+ L H V +L + + +GS D TVK+W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 189 (71.6 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 37/120 (30%), Positives = 62/120 (51%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
++GH S V V +H + + + S D T+++WD +G+ R GH + ++ G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+AS D TI +WD C+ + GH V ++A G + S S D T+K+W+V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Score = 188 (71.2 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 51/188 (27%), Positives = 88/188 (46%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A + + L+ E++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT---KECKAELR-EHEHVVECISW 284
Query: 406 GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
P SY+ +G S P G F+LS S D TI++W L+ GH+
Sbjct: 285 APES---SYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
V V F+ G + S + D+T R+W + ++ + H V + +H Y+ TGS
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 526 DKTVRLWD 533
D+TV++W+
Sbjct: 401 DQTVKVWE 408
Score = 46 (21.3 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 2 DELQVVEFVATYLKKKGFSEAENAL--QAEIQRNK 34
DEL +A YL+ G+ EA + +AE+ N+
Sbjct: 9 DELN--RAIADYLRSNGYEEAYSVFKKEAELDMNE 41
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 300 (110.7 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 69/218 (31%), Positives = 108/218 (49%)
Query: 385 QQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
++ S G G+ P+E I P Y L GH PV F P+ ++S+S D T
Sbjct: 77 EEFTSGGPLGQK-RDPKEWIPRP---PEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDAT 131
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
I++W + KGH V D+ F+ G AS S D T ++W + +R M GH
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
+V V N ++I + S DKT+++W+V +G CV+ F GHR + + + DG +AS
Sbjct: 192 DHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251
Query: 565 GDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS 602
D T+ +W +A+ C L H V ++++ E S
Sbjct: 252 CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289
Score = 272 (100.8 bits), Expect = 6.1e-22, Sum P(2) = 6.1e-22
Identities = 60/186 (32%), Positives = 96/186 (51%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH PV V F+P S+S D T ++W + R + GH V + + + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+ S+D T++LWD EC+R GH + S+A+ P+G ++ S D TI MW++ +G
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 581 CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLK 640
CV GH V + + +G+L+AS S D TV++W V +TK K E + + + +
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV--ATKECKAELREHEHVVECIS 283
Query: 641 TLPTKS 646
P S
Sbjct: 284 WAPESS 289
Score = 214 (80.4 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 66/229 (28%), Positives = 105/229 (45%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH V S + P GD I+S+S D TI++W + + + GH V V+ N G
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 249
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY--IATGSSDKTVRLWDVSS 536
AS S+D+T R+W + + + H V+C+ W +Y I+ + +T + S
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK-----S 304
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
G+ P G ++ SG D TI MWD+++G C+ L+GH + V +
Sbjct: 305 GK------------------P-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL 345
Query: 597 YSCEGSLLASGSADCTVKLWDVTTST--KVLKTEEKSGTNRLRSLKTLP 643
+ G + S + D T+++WD K L E T+ L KT P
Sbjct: 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS-LDFHKTAP 393
Score = 201 (75.8 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 45/153 (29%), Positives = 78/153 (50%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V SF G + S SAD TI+LW + + GH++ V V P G +
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
S+S D+T ++W + ++ GH V VR + + IA+ S+D+TVR+W V++
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT 570
EC H ++ ++ +P+ Y + + G+
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSSISEATGS 299
Score = 192 (72.6 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 68/278 (24%), Positives = 118/278 (42%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNG-----RKR 412
S G L+A +D ++K+WD G + + + + G + I+ PNG R
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDFQ--GFECIRT-MHGHDHNVSSVAIM-PNGDHIVSASR 212
Query: 413 SYTL-------------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
T+ + GH V + G I S S D T+R+W
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
+ H + V + + P+ Y SS + T S + +G +
Sbjct: 273 REHEHVVECISWAPESSY--SSISEATG---SETK------KSGKPGP-----------F 310
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
+ +GS DKT+++WDVS+G C+ +GH + + + G+++ S +D T+ +WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 580 RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
RC+ L H V +L + + +GS D TVK+W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 189 (71.6 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 37/120 (30%), Positives = 62/120 (51%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
++GH S V V +H + + + S D T+++WD +G+ R GH + ++ G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+AS D TI +WD C+ + GH V ++A G + S S D T+K+W+V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Score = 188 (71.2 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 51/188 (27%), Positives = 88/188 (46%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A + + L+ E++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT---KECKAELR-EHEHVVECISW 284
Query: 406 GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
P SY+ +G S P G F+LS S D TI++W L+ GH+
Sbjct: 285 APES---SYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
V V F+ G + S + D+T R+W + ++ + H V + +H Y+ TGS
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 526 DKTVRLWD 533
D+TV++W+
Sbjct: 401 DQTVKVWE 408
Score = 46 (21.3 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 2 DELQVVEFVATYLKKKGFSEAENAL--QAEIQRNK 34
DEL +A YL+ G+ EA + +AE+ N+
Sbjct: 9 DELN--RAIADYLRSNGYEEAYSVFKKEAELDMNE 41
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 313 (115.2 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 63/209 (30%), Positives = 108/209 (51%)
Query: 410 RKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
+ R+Y + GH V +FSP G + S S D T+R+W + ++ H V V
Sbjct: 51 QSRAYR-FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSV 109
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
F G ++S D+T ++WS R + L ++ H++ V C R+ + I + S DKTV
Sbjct: 110 HFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTV 169
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
+LWD +S ECV + H + + P G +A+ D T+ +WD+ + R + H+
Sbjct: 170 KLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHS 229
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLWDV 618
+ V L++ G+ L + S+D T+K+ D+
Sbjct: 230 AAVNALSFHPSGNYLLTASSDSTLKILDL 258
Score = 285 (105.4 bits), Expect = 7.1e-23, P = 7.1e-23
Identities = 63/204 (30%), Positives = 96/204 (47%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
++GH + S FS + S S D+ + +W K + + GH V V F+P GH
Sbjct: 15 FKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGH 74
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
AS S D+T RIW + + H + V V + + + T S DKTV++W
Sbjct: 75 LLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHR 134
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+ + H + + SPDGR + S +D T+ +WD S CV H V +
Sbjct: 135 QKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 194
Query: 597 YSCEGSLLASGSADCTVKLWDVTT 620
+ G+ +A+ S D TVK+WDV T
Sbjct: 195 FHPSGTCIAAASMDNTVKVWDVRT 218
Score = 278 (102.9 bits), Expect = 6.2e-22, P = 6.2e-22
Identities = 63/210 (30%), Positives = 104/210 (49%)
Query: 407 PNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPV 466
PN + S T+++ H+ V S F G ++++S D T+++WST L H V
Sbjct: 90 PNVKGES-TVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWV 148
Query: 467 WDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSD 526
+F+P G S+S D+T ++W + + H V V +H + IA S D
Sbjct: 149 RCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMD 208
Query: 527 KTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLM 586
TV++WDV + ++ + H + + +L+ P G Y+ + D T+ + DL GR + L
Sbjct: 209 NTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLH 268
Query: 587 GHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
GH T+A+S G ASG +D V +W
Sbjct: 269 GHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 263 (97.6 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 70/250 (28%), Positives = 116/250 (46%)
Query: 340 PSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSG-------- 391
P Y F + + C + S G L+A G D ++++W G+ V
Sbjct: 50 PQSRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSV 109
Query: 392 ---LQGENDTTPRED----IIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
G++ T +D + + +K ++L Q H V A FSP G I+S+S D T
Sbjct: 110 HFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQ-HINWVRCARFSPDGRLIVSASDDKT 168
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
++LW + Y H V V F+P G A++S D T ++W + + L+ H
Sbjct: 169 VKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLH 228
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
+ V+ + +H + NY+ T SSD T+++ D+ G + GH+ ++A S G Y AS
Sbjct: 229 SAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 288
Query: 565 GDEDGTIMMW 574
G D +M+W
Sbjct: 289 GGSDEQVMVW 298
Score = 159 (61.0 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 35/119 (29%), Positives = 56/119 (47%)
Query: 499 RIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPD 558
R GH + V + +N +A+GS D + +W + F GH+ + + SP
Sbjct: 13 RHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPS 72
Query: 559 GRYMASGDEDGTIMMW-DLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
G +ASG D T+ +W G T HT+ V ++ + +G L + S D TVK+W
Sbjct: 73 GHLLASGSRDKTVRIWIPNVKGES-TVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 313 (115.2 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 63/209 (30%), Positives = 109/209 (52%)
Query: 410 RKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
+ R+Y + GH V +FSP G + S S D T+R+W + ++ H V V
Sbjct: 13 QSRAYR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 71
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
F G F ++S D+T ++W+ R + L ++ H++ V C ++ + I + S DKTV
Sbjct: 72 HFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTV 131
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
+LWD SS ECV + H + + P G +A+ D T+ +WD+ + R + H+
Sbjct: 132 KLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHS 191
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLWDV 618
+ V L++ G+ L + S+D T+K+ D+
Sbjct: 192 AAVNGLSFHPSGNYLITASSDSTLKILDL 220
Score = 284 (105.0 bits), Expect = 4.8e-24, P = 4.8e-24
Identities = 75/260 (28%), Positives = 118/260 (45%)
Query: 394 GENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLN 453
G D T R I PN + S T+++ H+ V S F G +++S D T+++W+T
Sbjct: 41 GSRDKTVR--IWVPNVKGES-TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQ 97
Query: 454 ANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW 513
L H V +F+P G S+S D+T ++W + + H V V +
Sbjct: 98 KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDF 157
Query: 514 HINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMM 573
H + IA D TV++WDV + ++ + H + + L+ P G Y+ + D T+ +
Sbjct: 158 HPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKI 217
Query: 574 WDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW----DVTTSTKVLKTEE 629
DL GR + L GH T+A+S G ASG +D V +W D+ +V K
Sbjct: 218 LDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDIVDHGEVTKVPR 277
Query: 630 KSGTNRLRSLKTLPTKSTPV 649
T S+ LP PV
Sbjct: 278 PPAT-LASSMGNLPEVDFPV 296
Score = 259 (96.2 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 69/250 (27%), Positives = 115/250 (46%)
Query: 340 PSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSG-------- 391
P Y F + + C + S G L+A G D ++++W G+ V
Sbjct: 12 PQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 71
Query: 392 ---LQGENDTTPRED----IIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
G++ T +D + + +K ++L Q H V A FSP G I+S+S D T
Sbjct: 72 HFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQ-HINWVRCAKFSPDGRLIVSASDDKT 130
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
++LW + Y H V V F+P G A++ D T ++W + + L+ H
Sbjct: 131 VKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLH 190
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
+ V+ + +H + NY+ T SSD T+++ D+ G + GH+ ++A S G Y AS
Sbjct: 191 SAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 250
Query: 565 GDEDGTIMMW 574
G D +M+W
Sbjct: 251 GGSDEQVMVW 260
Score = 252 (93.8 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 55/179 (30%), Positives = 84/179 (46%)
Query: 442 DTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIM 501
D+ + +W K + + GH V V F+P GH AS S D+T RIW + +
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVF 61
Query: 502 AGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRY 561
H + V V + + T S DKTV++W + + H + + SPDGR
Sbjct: 62 RAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRL 121
Query: 562 MASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+ S +D T+ +WD +S CV H V + + G+ +A+ D TVK+WDV T
Sbjct: 122 IVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT 180
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 313 (115.2 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 63/209 (30%), Positives = 109/209 (52%)
Query: 410 RKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
+ R+Y + GH V +FSP G + S S D T+R+W + ++ H V V
Sbjct: 51 QSRAYR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 109
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
F G F ++S D+T ++W+ R + L ++ H++ V C ++ + I + S DKTV
Sbjct: 110 HFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTV 169
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
+LWD SS ECV + H + + P G +A+ D T+ +WD+ + R + H+
Sbjct: 170 KLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHS 229
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLWDV 618
+ V L++ G+ L + S+D T+K+ D+
Sbjct: 230 AAVNGLSFHPSGNYLITASSDSTLKILDL 258
Score = 277 (102.6 bits), Expect = 8.5e-22, P = 8.5e-22
Identities = 80/292 (27%), Positives = 128/292 (43%)
Query: 340 PSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQ--------QAVS-- 389
PS+ + F + + C S + +A G DS L VW M + AV+
Sbjct: 9 PSLERH-FKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCV 67
Query: 390 ----SG-LQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
SG L I PN + S T+++ H+ V S F G +++S D T
Sbjct: 68 NFSPSGHLLASGSRDKTVRIWVPNVKGES-TVFRAHTATVRSVHFCSDGQSFVTASDDKT 126
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
+++W+T L H V +F+P G S+S D+T ++W + + H
Sbjct: 127 VKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEH 186
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
V V +H + IA D TV++WDV + ++ + H + + L+ P G Y+ +
Sbjct: 187 GGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLIT 246
Query: 565 GDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
D T+ + DL GR + L GH T+A+S G ASG +D V +W
Sbjct: 247 ASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 274 (101.5 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 62/204 (30%), Positives = 94/204 (46%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
++GH V FS + S S D+ + +W K + + GH V V F+P GH
Sbjct: 15 FKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 74
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
AS S D+T RIW + + H + V V + + T S DKTV++W
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHR 134
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+ + H + + SPDGR + S +D T+ +WD +S CV H V +
Sbjct: 135 QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVD 194
Query: 597 YSCEGSLLASGSADCTVKLWDVTT 620
+ G+ +A+ D TVK+WDV T
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWDVRT 218
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 329 (120.9 bits), Expect = 3.8e-27, P = 3.8e-27
Identities = 77/233 (33%), Positives = 122/233 (52%)
Query: 392 LQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTK 451
+ G D T + N R Y LY GHSG V F + ++S S+D+TI +W +
Sbjct: 235 VSGSKDRTV--SVWDVNSRFILYKLY-GHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQ 291
Query: 452 LNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQP----LRIMAGHLSD 507
L Y GH V V + +Y SSS D TAR+W +D P + ++ GHL+
Sbjct: 292 NRRPLKVYFGHTDNVLGVVVSE--NYIISSSRDHTARVWRLDATSPAEACMHVLRGHLAS 349
Query: 508 VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDE 567
V+ V++ I T SSD+T+R WD+++G C+RI H+ I + G+++ SG
Sbjct: 350 VNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYN--GKFIVSGSS 407
Query: 568 DGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
D TI +++ +SG+ + L GH + T+ ++ E + SG D TV++W+ T
Sbjct: 408 DLTIRIFEASSGKLLRMLQGHEDLIRTVRFNDEK--IVSGGYDGTVRIWNFNT 458
Score = 228 (85.3 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 74/269 (27%), Positives = 128/269 (47%)
Query: 340 PSVSF---YTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAK---LGQQAVSSG-- 391
PS+ F F T + + C + D ++ G D ++ VWD+ L + SG
Sbjct: 207 PSIRFPADQDFRATLDSVYC--VQYDDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSV 264
Query: 392 ------------LQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSS 439
+ G +D+T II +R +Y GH+ V S ++I+SS
Sbjct: 265 LCLDFCRRRNLLVSGSSDSTI---IIWDWQNRRPLKVYFGHTDNVLGVVVSE--NYIISS 319
Query: 440 SADTTIRLW----STKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRI 495
S D T R+W ++ A + +GH V VQ++ + ++S DRT R W +
Sbjct: 320 SRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTG 379
Query: 496 QPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAM 555
+RI+ H + C ++ N +I +GSSD T+R+++ SSG+ +R+ GH +I ++
Sbjct: 380 HCIRIIHAHQRGIACAQY--NGKFIVSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRF 437
Query: 556 SPDGRYMASGDEDGTIMMWDLASGR--CV 582
+ + + SG DGT+ +W+ +G CV
Sbjct: 438 NDEK--IVSGGYDGTVRIWNFNTGEQHCV 464
Score = 213 (80.0 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 64/228 (28%), Positives = 115/228 (50%)
Query: 400 PREDIIGPNGRKR---SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANL 456
P++ I NGR SY LY+ H+ + S G F++S+ + +IR + +
Sbjct: 165 PQQFIFDSNGRPLLNWSY-LYKEHA---HLDSNWRHGRFLVSTFNNPSIRFPADQ----- 215
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN 516
++ V+ VQ++ + S S DRT +W ++ L + GH V C+ +
Sbjct: 216 -DFRATLDSVYCVQYDDE--IMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRR 272
Query: 517 CNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
N + +GSSD T+ +WD + ++++ GH +L + +S + Y+ S D T +W L
Sbjct: 273 RNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSEN--YIISSSRDHTARVWRL 330
Query: 577 -ASG---RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
A+ C+ L GH + V ++ YS + L+ + S+D T++ WD+TT
Sbjct: 331 DATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITT 378
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 312 (114.9 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 75/234 (32%), Positives = 123/234 (52%)
Query: 398 TTPR--EDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWST-KLNA 454
+ PR E+ PN R TL GHS + S FSP G+++ SS+AD I +W N
Sbjct: 16 SAPRREEEPQKPNYALR-LTL-AGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNC 73
Query: 455 NLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
Y GH+ + DV ++ S+S D+T ++W M + L+ + GH V C ++
Sbjct: 74 KKTLY-GHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFN 132
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
N I +GS D++V++W+V +G+C++ H I ++ + +G + SG DG +W
Sbjct: 133 PPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIW 192
Query: 575 DLASGRCVTPLMGHTSC-VWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
D ASG+C+ L + V + +S G + + + D T+KLWD + + LKT
Sbjct: 193 DAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRG-RCLKT 245
Score = 306 (112.8 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 89/293 (30%), Positives = 141/293 (48%)
Query: 336 SAALPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVW------DMAKLGQQAVS 389
SAA+ SV F + NG AS + D ++ G D + K +++ + + S
Sbjct: 39 SAAISSVKF-----SPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDS 93
Query: 390 SGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWS 449
S L +D + + K TL +GHS V+ F+P + I+S S D ++++W
Sbjct: 94 SRLVSASDDKTLK-VWDMRSGKCLKTL-KGHSDFVFCCDFNPPSNLIVSGSFDESVKIWE 151
Query: 450 TKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSD-V 508
K L H+ P+ V FN G S S+D RIW Q LR +A + V
Sbjct: 152 VKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPV 211
Query: 509 DCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRS--MILSLAMSPDGR-YMASG 565
V++ N YI T + D T++LWD S G C++ + GH++ L + S GR ++ SG
Sbjct: 212 SFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSG 271
Query: 566 DEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSA--DCTVKLW 616
ED + +W+L + V L GHT V + A +++AS + D T+K+W
Sbjct: 272 SEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324
Score = 301 (111.0 bits), Expect = 6.9e-26, P = 6.9e-26
Identities = 70/237 (29%), Positives = 123/237 (51%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQ 474
TLY GHS + ++S ++S+S D T+++W + L KGH+ V+ FNP
Sbjct: 76 TLY-GHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPP 134
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDV 534
+ S S D + +IW + + L+ ++ H + V ++ N + I +GS D R+WD
Sbjct: 135 SNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDA 194
Query: 535 SSGECVRIFIGHRSMILSLA-MSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS--- 590
+SG+C+R + +S SP+G+Y+ + D T+ +WD + GRC+ GH +
Sbjct: 195 ASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKY 254
Query: 591 CVWTLAYSCEG-SLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKS 646
C++ ++S G + SGS D V +W++ T V + + T+ + S PTK+
Sbjct: 255 CLFA-SFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQ--GHTDVVISAACHPTKN 308
Score = 279 (103.3 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 52/183 (28%), Positives = 96/183 (52%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH+ + V+F+P G + ASS+ D IW + + GH ++ V W + + +
Sbjct: 37 GHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRL 96
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
+ S DKT+++WD+ SG+C++ GH + +P + SG D ++ +W++ +G+
Sbjct: 97 VSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGK 156
Query: 581 CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLK 640
C+ L H+ + + ++C GSL+ SGS D ++WD S + L+T G + +K
Sbjct: 157 CLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAA-SGQCLRTLADEGNPPVSFVK 215
Query: 641 TLP 643
P
Sbjct: 216 FSP 218
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 300 (110.7 bits), Expect = 5.1e-27, Sum P(2) = 5.1e-27
Identities = 69/218 (31%), Positives = 108/218 (49%)
Query: 385 QQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
++ S G G+ P+E I P Y L GH PV F P+ ++S+S D T
Sbjct: 77 EEFTSGGPLGQK-RDPKEWIPRP---PEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDAT 131
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
I++W + KGH V D+ F+ G AS S D T ++W + +R M GH
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
+V V N ++I + S DKT+++W+V +G CV+ F GHR + + + DG +AS
Sbjct: 192 DHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251
Query: 565 GDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS 602
D T+ +W +A+ C L H V ++++ E S
Sbjct: 252 CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289
Score = 272 (100.8 bits), Expect = 9.9e-22, Sum P(2) = 9.9e-22
Identities = 60/186 (32%), Positives = 96/186 (51%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH PV V F+P S+S D T ++W + R + GH V + + + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+ S+D T++LWD EC+R GH + S+A+ P+G ++ S D TI MW++ +G
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 581 CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLK 640
CV GH V + + +G+L+AS S D TV++W V +TK K E + + + +
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV--ATKECKAELREHEHVVECIS 283
Query: 641 TLPTKS 646
P S
Sbjct: 284 WAPESS 289
Score = 214 (80.4 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 66/229 (28%), Positives = 105/229 (45%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH V S + P GD I+S+S D TI++W + + + GH V V+ N G
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 249
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY--IATGSSDKTVRLWDVSS 536
AS S+D+T R+W + + + H V+C+ W +Y I+ + +T + S
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK-----S 304
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
G+ P G ++ SG D TI MWD+++G C+ L+GH + V +
Sbjct: 305 GK------------------P-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL 345
Query: 597 YSCEGSLLASGSADCTVKLWDVTTST--KVLKTEEKSGTNRLRSLKTLP 643
+ G + S + D T+++WD K L E T+ L KT P
Sbjct: 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS-LDFHKTAP 393
Score = 201 (75.8 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 45/153 (29%), Positives = 78/153 (50%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V SF G + S SAD TI+LW + + GH++ V V P G +
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
S+S D+T ++W + ++ GH V VR + + IA+ S+D+TVR+W V++
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT 570
EC H ++ ++ +P+ Y + + G+
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSSISEATGS 299
Score = 192 (72.6 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 68/278 (24%), Positives = 118/278 (42%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNG-----RKR 412
S G L+A +D ++K+WD G + + + + G + I+ PNG R
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDFQ--GFECIRT-MHGHDHNVSSVAIM-PNGDHIVSASR 212
Query: 413 SYTL-------------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
T+ + GH V + G I S S D T+R+W
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
+ H + V + + P+ Y SS + T S + +G +
Sbjct: 273 REHEHVVECISWAPESSY--SSISEATG---SETK------KSGKPGP-----------F 310
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
+ +GS DKT+++WDVS+G C+ +GH + + + G+++ S +D T+ +WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 580 RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
RC+ L H V +L + + +GS D TVK+W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 189 (71.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 37/120 (30%), Positives = 62/120 (51%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
++GH S V V +H + + + S D T+++WD +G+ R GH + ++ G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+AS D TI +WD C+ + GH V ++A G + S S D T+K+W+V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Score = 188 (71.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 51/188 (27%), Positives = 88/188 (46%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A + + L+ E++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT---KECKAELR-EHEHVVECISW 284
Query: 406 GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
P SY+ +G S P G F+LS S D TI++W L+ GH+
Sbjct: 285 APES---SYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
V V F+ G + S + D+T R+W + ++ + H V + +H Y+ TGS
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 526 DKTVRLWD 533
D+TV++W+
Sbjct: 401 DQTVKVWE 408
Score = 44 (20.5 bits), Expect = 5.1e-27, Sum P(2) = 5.1e-27
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 2 DELQVVEFVATYLKKKGFSEAENALQAEIQ 31
DEL +A YL+ G+ EA + + E +
Sbjct: 9 DELN--RAIADYLRSNGYEEAYSVFKKEAE 36
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 310 (114.2 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 63/209 (30%), Positives = 106/209 (50%)
Query: 410 RKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
+ R+Y + GH V +FSP G + S S D T+R+W + ++ H V V
Sbjct: 51 QSRAYR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 109
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
F G ++S D+T ++WS R + L + H++ V C ++ + I + S DKTV
Sbjct: 110 HFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTV 169
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
+LWD +S ECV + H + + P G +A+ D T+ +WD + R V H+
Sbjct: 170 KLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHS 229
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLWDV 618
+ V L++ G+ L + S+D T+K+ D+
Sbjct: 230 AAVNALSFHPSGNYLITASSDSTLKILDL 258
Score = 292 (107.8 bits), Expect = 6.6e-25, P = 6.6e-25
Identities = 83/294 (28%), Positives = 133/294 (45%)
Query: 340 PSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQ--------QAVS-- 389
PS+ + F + + C S + +A G DS+L +W M + AV+
Sbjct: 9 PSLERH-FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCV 67
Query: 390 ----SG---LQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSAD 442
SG G D T R I PN + S T+++ H+ V S F G ++++S D
Sbjct: 68 NFSPSGHLLASGSRDKTVR--IWVPNVKGES-TVFRAHTATVRSVHFCSDGQLLVTASDD 124
Query: 443 TTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMA 502
T+++WST L H V +F+P G S+S D+T ++W + +
Sbjct: 125 KTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYC 184
Query: 503 GHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYM 562
H V V +H + IA D TV++WD + V+ + H + + +L+ P G Y+
Sbjct: 185 EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYL 244
Query: 563 ASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
+ D T+ + DL GR + L GH T+A+S G ASG +D V +W
Sbjct: 245 ITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 283 (104.7 bits), Expect = 6.2e-24, P = 6.2e-24
Identities = 62/204 (30%), Positives = 93/204 (45%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
++GH V FS + S S D+T+ +W K + + GH V V F+P GH
Sbjct: 15 FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 74
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
AS S D+T RIW + + H + V V + + + T S DKTV++W
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHR 134
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+ H + + SPDGR + S +D T+ +WD S CV H V +
Sbjct: 135 QRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 194
Query: 597 YSCEGSLLASGSADCTVKLWDVTT 620
+ G+ +A+ D TVK+WD T
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWDTRT 218
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 299 (110.3 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 69/218 (31%), Positives = 108/218 (49%)
Query: 385 QQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
++ S G G+ P+E I P Y L GH PV F P+ ++S+S D T
Sbjct: 77 EEFTSGGPLGQK-RDPKEWIPRP---PEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDAT 131
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
I++W + KGH V D+ F+ G AS S D T ++W + +R M GH
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
+V V N ++I + S DKT+++W+V +G CV+ F GHR + + + DG +AS
Sbjct: 192 DHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251
Query: 565 GDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS 602
D T+ +W +A+ C L H V ++++ E S
Sbjct: 252 CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289
Score = 271 (100.5 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 60/186 (32%), Positives = 95/186 (51%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH PV V F+P S+S D T ++W + R + GH V + + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLL 165
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+ S+D T++LWD EC+R GH + S+A+ P+G ++ S D TI MW++ +G
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 581 CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLK 640
CV GH V + + +G+L+AS S D TV++W V +TK K E + + + +
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV--ATKECKAELREHEHVVECIS 283
Query: 641 TLPTKS 646
P S
Sbjct: 284 WAPESS 289
Score = 217 (81.4 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 66/227 (29%), Positives = 104/227 (45%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH V S + P GD I+S+S D TI++W + + + GH V V+ N G
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 249
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
AS S+D+T R+W + + + H V+C+ W A SS T+ + + E
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISW-------APESSYSTIS--EATGSE 300
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS 598
+ + P G ++ SG D TI MWD+++G C+ L+GH + V + +
Sbjct: 301 TKK------------SGKP-GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFH 347
Query: 599 CEGSLLASGSADCTVKLWDVTTST--KVLKTEEKSGTNRLRSLKTLP 643
G + S + D T+++WD K L E T+ L KT P
Sbjct: 348 SGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTS-LDFHKTAP 393
Score = 201 (75.8 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 45/153 (29%), Positives = 77/153 (50%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V SF G + S SAD TI+LW + + GH++ V V P G +
Sbjct: 147 KGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
S+S D+T ++W + ++ GH V VR + + IA+ S+D+TVR+W V++
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT 570
EC H ++ ++ +P+ Y + G+
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSTISEATGS 299
Score = 189 (71.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 51/188 (27%), Positives = 88/188 (46%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A + + L+ E++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT---KECKAELR-EHEHVVECISW 284
Query: 406 GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
P SY+ +G S P G F+LS S D TI++W L+ GH+
Sbjct: 285 APES---SYSTISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNW 340
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
V V F+ G + S + D+T R+W + ++ + H V + +H Y+ TGS
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 526 DKTVRLWD 533
D+TV++W+
Sbjct: 401 DQTVKVWE 408
Score = 188 (71.2 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 31/99 (31%), Positives = 58/99 (58%)
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
++ +GS DKT+++WD+S+G C+ +GH + + + G+++ S +D T+ +WD +
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKN 369
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
RC+ L H V +L + + +GS D TVK+W+
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 188 (71.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 37/120 (30%), Positives = 62/120 (51%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
++GH S V V +H + + + S D T+++WD +G+ R GH + ++ G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+AS D TI +WD C+ + GH V ++A G + S S D T+K+W+V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Score = 148 (57.2 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 28/101 (27%), Positives = 50/101 (49%)
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDV 534
G + S S D+T ++W + L + GH + V V +H +I + + DKT+R+WD
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDF 367
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWD 575
+ C++ H + SL Y+ +G D T+ +W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 44 (20.5 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 2 DELQVVEFVATYLKKKGFSEAENALQAEIQ 31
DEL +A YL+ G+ EA + + E +
Sbjct: 9 DELN--RAIADYLRSNGYEEAYSVFKKEAE 36
Score = 42 (19.8 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 351 HNGLNCASISQDGSLVAGGFSDSSLKVWDM 380
HN ++ +I +G + D ++K+W++
Sbjct: 193 HN-VSSVAIMPNGDHIVSASRDKTIKMWEV 221
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 305 (112.4 bits), Expect = 2.6e-26, P = 2.6e-26
Identities = 61/209 (29%), Positives = 106/209 (50%)
Query: 410 RKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
+ R+Y + GH V +FSP G + S S D T+R+W + ++ H V V
Sbjct: 51 QSRAYR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 109
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
F G ++S D+T ++WS R + L + H++ V C ++ + I + S DKTV
Sbjct: 110 HFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTV 169
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
+LWD +S EC+ + H + + P G +A+ D T+ +WD + R + H+
Sbjct: 170 KLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHS 229
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLWDV 618
+ V L++ G+ L + S+D T+K+ D+
Sbjct: 230 AAVNALSFHPSGNYLITASSDSTLKILDL 258
Score = 288 (106.4 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 82/294 (27%), Positives = 133/294 (45%)
Query: 340 PSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQ--------QAVS-- 389
PS+ + F + + C S + +A G DS+L +W M + AV+
Sbjct: 9 PSLERH-FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCV 67
Query: 390 ----SG---LQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSAD 442
SG G D T R I PN + S T+++ H+ V S F G ++++S D
Sbjct: 68 NFSPSGHLLASGSRDKTVR--IWVPNVKGES-TVFRAHTATVRSVHFCSDGQSLVTASDD 124
Query: 443 TTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMA 502
T+++WST L H V +F+P G S+S D+T ++W + +
Sbjct: 125 KTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYC 184
Query: 503 GHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYM 562
H V V +H + IA D TV++WD + ++ + H + + +L+ P G Y+
Sbjct: 185 EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYL 244
Query: 563 ASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
+ D T+ + DL GR + L GH T+A+S G ASG +D V +W
Sbjct: 245 ITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 281 (104.0 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 61/204 (29%), Positives = 93/204 (45%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
++GH V FS + S S D+T+ +W K + + GH V V F+P GH
Sbjct: 15 FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 74
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
AS S D+T RIW + + H + V V + + + T S DKTV++W
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHR 134
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+ H + + SPDGR + S +D T+ +WD S C+ H V +
Sbjct: 135 QRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVD 194
Query: 597 YSCEGSLLASGSADCTVKLWDVTT 620
+ G+ +A+ D TVK+WD T
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWDART 218
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 299 (110.3 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 69/218 (31%), Positives = 108/218 (49%)
Query: 385 QQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
++ S G G+ P+E I P Y L GH PV F P+ ++S+S D T
Sbjct: 77 EEFTSGGPLGQK-RDPKEWIPRP---PEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDAT 131
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
I++W + KGH V D+ F+ G AS S D T ++W + +R M GH
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
+V V N ++I + S DKT+++W+V +G CV+ F GHR + + + DG +AS
Sbjct: 192 DHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251
Query: 565 GDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS 602
D T+ +W +A+ C L H V ++++ E S
Sbjct: 252 CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289
Score = 274 (101.5 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 60/186 (32%), Positives = 97/186 (52%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH PV V F+P S+S D T ++W + R + GH V+ + + + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLL 165
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+ S+D T++LWD EC+R GH + S+A+ P+G ++ S D TI MW++ +G
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 581 CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLK 640
CV GH V + + +G+L+AS S D TV++W V +TK K E + + + +
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV--ATKECKAELREHEHVVECIS 283
Query: 641 TLPTKS 646
P S
Sbjct: 284 WAPESS 289
Score = 214 (80.4 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 66/229 (28%), Positives = 105/229 (45%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH V S + P GD I+S+S D TI++W + + + GH V V+ N G
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 249
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY--IATGSSDKTVRLWDVSS 536
AS S+D+T R+W + + + H V+C+ W +Y I+ + +T + S
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK-----S 304
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
G+ P G ++ SG D TI MWD+++G C+ L+GH + V +
Sbjct: 305 GK------------------P-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL 345
Query: 597 YSCEGSLLASGSADCTVKLWDVTTST--KVLKTEEKSGTNRLRSLKTLP 643
+ G + S + D T+++WD K L E T+ L KT P
Sbjct: 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS-LDFHKTAP 393
Score = 200 (75.5 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 45/153 (29%), Positives = 78/153 (50%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V SF G + S SAD TI+LW + + GH++ V V P G +
Sbjct: 147 KGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
S+S D+T ++W + ++ GH V VR + + IA+ S+D+TVR+W V++
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT 570
EC H ++ ++ +P+ Y + + G+
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSSISEATGS 299
Score = 192 (72.6 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 68/278 (24%), Positives = 118/278 (42%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNG-----RKR 412
S G L+A +D ++K+WD G + + + + G + I+ PNG R
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDFQ--GFECIRT-MHGHDHNVSSVAIM-PNGDHIVSASR 212
Query: 413 SYTL-------------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
T+ + GH V + G I S S D T+R+W
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
+ H + V + + P+ Y SS + T S + +G +
Sbjct: 273 REHEHVVECISWAPESSY--SSISEATG---SETK------KSGKPGP-----------F 310
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
+ +GS DKT+++WDVS+G C+ +GH + + + G+++ S +D T+ +WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 580 RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
RC+ L H V +L + + +GS D TVK+W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 188 (71.2 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 37/120 (30%), Positives = 62/120 (51%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
++GH S V V +H + + + S D T+++WD +G+ R GH + ++ G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGK 163
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+AS D TI +WD C+ + GH V ++A G + S S D T+K+W+V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Score = 188 (71.2 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 51/188 (27%), Positives = 88/188 (46%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A + + L+ E++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT---KECKAELR-EHEHVVECISW 284
Query: 406 GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
P SY+ +G S P G F+LS S D TI++W L+ GH+
Sbjct: 285 APES---SYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
V V F+ G + S + D+T R+W + ++ + H V + +H Y+ TGS
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 526 DKTVRLWD 533
D+TV++W+
Sbjct: 401 DQTVKVWE 408
Score = 40 (19.1 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 2 DELQVVEFVATYLKKKGFSEAENAL--QAEIQRNK 34
DEL +A YL+ G+ A + +AE+ N+
Sbjct: 9 DELN--RAIADYLRSNGYEAAYSVFKKEAELDMNE 41
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 297 (109.6 bits), Expect = 3.6e-26, Sum P(2) = 3.6e-26
Identities = 68/218 (31%), Positives = 108/218 (49%)
Query: 385 QQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
++ S G G+ P+E I P Y L GH PV F P+ ++S+S D T
Sbjct: 77 EEFTSGGPLGQK-RDPKEWIPRP---PEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDAT 131
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
I++W + KGH V D+ F+ G AS S D T ++W + +R M GH
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
+V V N ++I + + DKT+++W+V +G CV+ F GHR + + + DG +AS
Sbjct: 192 DHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251
Query: 565 GDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS 602
D T+ +W +A+ C L H V ++++ E S
Sbjct: 252 CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289
Score = 270 (100.1 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 60/186 (32%), Positives = 96/186 (51%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH PV V F+P S+S D T ++W + R + GH V + + + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+ S+D T++LWD EC+R GH + S+A+ P+G ++ S D TI MW++ +G
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGY 225
Query: 581 CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLK 640
CV GH V + + +G+L+AS S D TV++W V +TK K E + + + +
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV--ATKECKAELREHEHVVECIS 283
Query: 641 TLPTKS 646
P S
Sbjct: 284 WAPESS 289
Score = 211 (79.3 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 65/229 (28%), Positives = 105/229 (45%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH V S + P GD I+S++ D TI++W + + + GH V V+ N G
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 249
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY--IATGSSDKTVRLWDVSS 536
AS S+D+T R+W + + + H V+C+ W +Y I+ + +T + S
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK-----S 304
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
G+ P G ++ SG D TI MWD+++G C+ L+GH + V +
Sbjct: 305 GK------------------P-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL 345
Query: 597 YSCEGSLLASGSADCTVKLWDVTTST--KVLKTEEKSGTNRLRSLKTLP 643
+ G + S + D T+++WD K L E T+ L KT P
Sbjct: 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS-LDFHKTAP 393
Score = 198 (74.8 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 44/153 (28%), Positives = 78/153 (50%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V SF G + S SAD TI+LW + + GH++ V V P G +
Sbjct: 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
S++ D+T ++W + ++ GH V VR + + IA+ S+D+TVR+W V++
Sbjct: 207 IVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT 570
EC H ++ ++ +P+ Y + + G+
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSSISEATGS 299
Score = 192 (72.6 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 67/278 (24%), Positives = 120/278 (43%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNG-------R 410
S G L+A +D ++K+WD G + + + + G + I+ PNG R
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDFQ--GFECIRT-MHGHDHNVSSVAIM-PNGDHIVSAAR 212
Query: 411 KRSYTLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
++ +++ GH V + G I S S D T+R+W
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
+ H + V + + P+ Y SS + T S + +G +
Sbjct: 273 REHEHVVECISWAPESSY--SSISEATG---SETK------KSGKPGP-----------F 310
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
+ +GS DKT+++WDVS+G C+ +GH + + + G+++ S +D T+ +WD +
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 580 RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
RC+ L H V +L + + +GS D TVK+W+
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 188 (71.2 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 51/188 (27%), Positives = 88/188 (46%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A + + L+ E++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT---KECKAELR-EHEHVVECISW 284
Query: 406 GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
P SY+ +G S P G F+LS S D TI++W L+ GH+
Sbjct: 285 APES---SYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
V V F+ G + S + D+T R+W + ++ + H V + +H Y+ TGS
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 526 DKTVRLWD 533
D+TV++W+
Sbjct: 401 DQTVKVWE 408
Score = 186 (70.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 36/120 (30%), Positives = 62/120 (51%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
++GH S V V +H + + + S D T+++WD +G+ R GH + ++ G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+AS D TI +WD C+ + GH V ++A G + S + D T+K+W+V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQT 223
Score = 46 (21.3 bits), Expect = 3.6e-26, Sum P(2) = 3.6e-26
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 2 DELQVVEFVATYLKKKGFSEAENAL--QAEIQRNK 34
DEL +A YL+ G+ EA + +AE+ N+
Sbjct: 9 DELN--RAIADYLRSNGYEEAYSVFKKEAELDMNE 41
>UNIPROTKB|B3NQR5 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7220 "Drosophila erecta"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH954179 OrthoDB:EOG45DV4X RefSeq:XP_001975575.1
ProteinModelPortal:B3NQR5 EnsemblMetazoa:FBtr0142445 GeneID:6549053
KEGG:der:Dere_GG22391 FlyBase:FBgn0114563 Uniprot:B3NQR5
Length = 335
Score = 283 (104.7 bits), Expect = 5.3e-26, Sum P(2) = 5.3e-26
Identities = 65/215 (30%), Positives = 103/215 (47%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWS---TKLNANLVCYKGHNYPVWDVQ 470
+TL QGH G ++ ++ P G+ S D IR+WS + + + GH + +++
Sbjct: 8 HTL-QGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGSTWSTKTILSDGHKRTIREIR 66
Query: 471 FNPQGHYFASSSHDRTARIWSMD--RIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
++P G Y AS+S D T IWS + + GH ++V V W + +AT S DK+
Sbjct: 67 WSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKS 126
Query: 529 VRLWDVSSG---ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW--DLASGR--C 581
V +W+V+ EC + H + + P +AS D TI M+ D C
Sbjct: 127 VWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKEVLASASYDNTIKMYAEDPVDNDWDC 186
Query: 582 VTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
L HTS +W + + +G L S S D T+K+W
Sbjct: 187 TATLTSHTSTIWGIDFDADGERLVSCSDDTTIKIW 221
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 42/132 (31%), Positives = 67/132 (50%)
Query: 492 MDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE-CVRIFI--GHRS 548
M R+ + GH + V WH N A+ DK +R+W ++ + + GH+
Sbjct: 1 MGRLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGSTWSTKTILSDGHKR 60
Query: 549 MILSLAMSPDGRYMASGDEDGTIMMWDLASGR--CVTPLMGHTSCVWTLAYSCEGSLLAS 606
I + SP G+Y+AS D T +W +SG C L GH + V ++++S G LLA+
Sbjct: 61 TIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 607 GSADCTVKLWDV 618
S D +V +W+V
Sbjct: 121 CSRDKSVWIWEV 132
Score = 43 (20.2 bits), Expect = 5.3e-26, Sum P(2) = 5.3e-26
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 604 LASGSADCTVKLWDVT 619
L S S D T+K+W VT
Sbjct: 319 LISCSDDGTIKIWKVT 334
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 317 (116.6 bits), Expect = 6.1e-26, P = 6.1e-26
Identities = 67/210 (31%), Positives = 108/210 (51%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
++GH + S FSP G + ++S DT + LW+ K A Y GH V VQF+P G+
Sbjct: 14 FKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGN 73
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
AS+S DRT R+W D+ H + V V + + ++AT S DK++++W++
Sbjct: 74 LLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYR 133
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+ H + SPDGR + S ED TI +WD + +CV +
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 193
Query: 597 YSCEGSLLASGSADCTVKLWDVTTSTKVLK 626
++ G+ +AS +D TVK+WD+ + K+L+
Sbjct: 194 FNPNGTCIASAGSDHTVKIWDIRVN-KLLQ 222
Score = 305 (112.4 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 73/242 (30%), Positives = 123/242 (50%)
Query: 407 PNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPV 466
P+ R +S + ++ H+ PV S FS G F+ ++S D +I++W+ L H + V
Sbjct: 89 PDKRGKS-SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWV 147
Query: 467 WDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSD 526
+F+P G S S D+T +IW Q + + + + V ++ N IA+ SD
Sbjct: 148 RCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSD 207
Query: 527 KTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLM 586
TV++WD+ + ++ + H + ++ P G Y+ + DGT+ + DL GR + L
Sbjct: 208 HTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQ 267
Query: 587 GHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKS 646
GHT V+T+++S G L +SG AD V LW T+ L ++ R+LK L S
Sbjct: 268 GHTGPVFTVSFSKGGELFSSGGADTQVLLW--RTNFDYLNCKDMIK----RNLKRLHFDS 321
Query: 647 TP 648
+P
Sbjct: 322 SP 323
Score = 296 (109.3 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 61/216 (28%), Positives = 110/216 (50%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
Y GH V S FSPLG+ + S+S D T+RLW +K H PV V F+ G
Sbjct: 56 YVGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQ 115
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
+ A++S D++ ++W+M R + L + H V C ++ + I + S DKT+++WD ++
Sbjct: 116 FLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN 175
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+CV F + +P+G +AS D T+ +WD+ + + H+ V ++
Sbjct: 176 KQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVS 235
Query: 597 YSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
+ G+ + + S+D T+K+ D+ + + +G
Sbjct: 236 FHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTG 271
Score = 247 (92.0 bits), Expect = 6.8e-18, P = 6.8e-18
Identities = 72/253 (28%), Positives = 117/253 (46%)
Query: 340 PSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQ-----------QAV 388
P + ++ + + S G+L+A D ++++W K G+ ++V
Sbjct: 49 PQARAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSV 108
Query: 389 SSGLQGENDTTPREDI---IGPNGRKRS-YTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
G+ T ED + R+R Y+LY+ H+ V A FSP G I+S S D T
Sbjct: 109 DFSADGQFLATASEDKSIKVWNMYRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 445 IRLWSTKLNANLVCYKGHNYPVWD---VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIM 501
I++W T N C + V V FNP G AS+ D T +IW + + L+
Sbjct: 168 IKIWDT---TNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHY 224
Query: 502 AGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRY 561
H V+CV +H + NYI T SSD T+++ D+ G + GH + +++ S G
Sbjct: 225 QVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGEL 284
Query: 562 MASGDEDGTIMMW 574
+SG D +++W
Sbjct: 285 FSSGGADTQVLLW 297
Score = 150 (57.9 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 32/120 (26%), Positives = 60/120 (50%)
Query: 499 RIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPD 558
R GH + + V + + +AT S D + LW+ ++GH+ ++ S+ SP
Sbjct: 12 RYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPL 71
Query: 559 GRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
G +AS D T+ +W + HT+ V ++ +S +G LA+ S D ++K+W++
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNM 131
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 288 (106.4 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
Identities = 70/236 (29%), Positives = 119/236 (50%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK-GHNYPVWDVQFNP 473
TL+ GH V S SP +I +SS+D TI++WS L L C GH + V++
Sbjct: 49 TLF-GHEKSVTCVSVSPNKRWIATSSSDGTIKIWSA-LTFRLECTLFGHYRGISQVKWAT 106
Query: 474 QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
Y AS+S D+T RIW ++ +R + GH + V + ++ + +GS D+TVR+W+
Sbjct: 107 GSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWN 166
Query: 534 VSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSC-V 592
+ G C+R+ H I+S+++S DG A+ DG +WD+ SG+C+ L+ + +
Sbjct: 167 LQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPL 226
Query: 593 WTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTP 648
L ++ L + + ++LWD + V + T S +K+ P
Sbjct: 227 SNLQFTENRKYLLVSNLNSQIRLWDYRRNRVVRIFDSHVNTRYSMSWDCYSSKNIP 282
Score = 192 (72.6 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 51/153 (33%), Positives = 77/153 (50%)
Query: 503 GHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYM 562
GH V CV N +IAT SSD T+++W + GH I + + +Y+
Sbjct: 52 GHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYL 111
Query: 563 ASGDEDGTIMMWDLASGRC-VTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTS 621
AS +D TI +WD RC V L GHT+ V ++ ++ G+LL SGS D TV++W++
Sbjct: 112 ASASDDKTIRIWDFEK-RCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNL--- 167
Query: 622 TKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQV 654
+ GT L+ LP S P+ S+ +
Sbjct: 168 --------QDGT----CLRMLPAHSEPIISVSI 188
Score = 187 (70.9 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 60/243 (24%), Positives = 106/243 (43%)
Query: 319 EVEQSILEDLRNRVHLSSAALPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVW 378
E E+ I + +RN S + + T + C S+S + +A SD ++K+W
Sbjct: 26 EDEEQIHKRIRNYESHSGFS----EYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIW 81
Query: 379 DMAKLGQQAVSSG-LQGENDT---TPREDIIGPNG---------RKR-SYTLYQGHSGPV 424
+ G +G + T + + + KR S +GH+ V
Sbjct: 82 SALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYV 141
Query: 425 YSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHD 484
S F+PLG ++S S D T+R+W+ + L H+ P+ V + G A++S+D
Sbjct: 142 SSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYD 201
Query: 485 RTARIWSMDRIQPLRIMAGHLS-DVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIF 543
ARIW + Q L+ + ++ + +++ N Y+ + + +RLWD VRIF
Sbjct: 202 GMARIWDVLSGQCLKTLVEPINVPLSNLQFTENRKYLLVSNLNSQIRLWDYRRNRVVRIF 261
Query: 544 IGH 546
H
Sbjct: 262 DSH 264
Score = 37 (18.1 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 2 DELQVVEFVATYLKKKGFSE 21
DE Q+ + + Y GFSE
Sbjct: 27 DEEQIHKRIRNYESHSGFSE 46
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 318 (117.0 bits), Expect = 6.5e-26, Sum P(3) = 6.5e-26
Identities = 73/224 (32%), Positives = 118/224 (52%)
Query: 401 REDIIGPNGRKRSYT---LYQGHSGPVYSA-SFSPLGDFILSSSADTTIRLWSTKLNANL 456
R+ II N R R + +GH V + FS G+ I+S S D T+++WS L
Sbjct: 971 RQHIIEMNWRSRPVRKPKVLKGHDDHVITCLQFS--GNRIVSGSDDNTLKVWSAVNGKCL 1028
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN 516
GH VW Q + G+ S S DRT ++W MD + + GH S V C+ H++
Sbjct: 1029 RTLVGHTGGVWSSQMS--GNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCM--HLH 1084
Query: 517 CNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
+ + +GS D T+R+WD+ G C+ + +GH + + + DG+ + SG D + +W
Sbjct: 1085 GSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQY--DGKLIVSGAYDYMVKIWHP 1142
Query: 577 ASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
C+ L GHT+ V++L + +G + SGS D ++++WDV T
Sbjct: 1143 ERQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVET 1184
Score = 279 (103.3 bits), Expect = 8.3e-20, Sum P(2) = 8.3e-20
Identities = 80/283 (28%), Positives = 137/283 (48%)
Query: 354 LNCASISQDGSLVAGGFSDSSLKVWDMAK-------LGQQAV--SSGLQGE---NDTTPR 401
+ C S G+ + G D++LKVW +G SS + G + +T R
Sbjct: 998 ITCLQFS--GNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGNIIISGSTDR 1055
Query: 402 E-DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
+ + +TL QGH+ V G ++S S D T+R+W + + L
Sbjct: 1056 TLKVWDMDSGACVHTL-QGHTSTVRCMHLH--GSKVVSGSRDATLRVWDIEQGSCLHVLV 1112
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH V VQ++ G S ++D +IW +R + L + GH + V +++ + ++
Sbjct: 1113 GHLAAVRCVQYD--GKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQF--DGLHV 1168
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
+GS D ++R+WDV +G C +GH+S+ + + + + SG+ D T+ +WD+ +G+
Sbjct: 1169 VSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQN--ILVSGNADSTVKVWDITTGQ 1226
Query: 581 CVTPLMG---HTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
C+ L G H S V L ++ + + S D TVKLWDV T
Sbjct: 1227 CLQTLSGPNKHHSAVTCLQFNSR--FVVTSSDDGTVKLWDVKT 1267
Score = 231 (86.4 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 73/285 (25%), Positives = 130/285 (45%)
Query: 351 HNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGP--- 407
H G S G+++ G +D +LKVWDM G A LQG T + G
Sbjct: 1034 HTG-GVWSSQMSGNIIISGSTDRTLKVWDMDS-G--ACVHTLQGHTSTVRCMHLHGSKVV 1089
Query: 408 NGRK----RSYTLYQG--------HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNAN 455
+G + R + + QG H V + G I+S + D +++W +
Sbjct: 1090 SGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYD--GKLIVSGAYDYMVKIWHPERQEC 1147
Query: 456 LVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHI 515
L +GH V+ +QF+ G + S S D + R+W ++ + GH S + +
Sbjct: 1148 LHTLQGHTNRVYSLQFD--GLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGME--L 1203
Query: 516 NCNYIATGSSDKTVRLWDVSSGECVRIFIG---HRSMILSLAMSPDGRYMASGDEDGTIM 572
N + +G++D TV++WD+++G+C++ G H S + L + R++ + +DGT+
Sbjct: 1204 RQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFN--SRFVVTSSDDGTVK 1261
Query: 573 MWDLASGRCVTPLM-----GHTSCVWTLAYSCEGSLLASGSADCT 612
+WD+ +G + L+ G VW + + + A GS + T
Sbjct: 1262 LWDVKTGDFIRNLVALDSGGSGGVVWRIRANDTKLICAVGSRNGT 1306
Score = 192 (72.6 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 68/246 (27%), Positives = 113/246 (45%)
Query: 363 GSLVAGGFSDSSLKVWDMAK-------LGQQAVSSGLQ--GENDTTPRED----IIGPNG 409
GS V G D++L+VWD+ + +G A +Q G+ + D I P
Sbjct: 1085 GSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPER 1144
Query: 410 RKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
++ +TL QGH+ VYS F L ++S S DT+IR+W + GH +
Sbjct: 1145 QECLHTL-QGHTNRVYSLQFDGL--HVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGM 1201
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAG---HLSDVDCVRWHINCNYIATGSSD 526
+ + S + D T ++W + Q L+ ++G H S V C+++ N ++ T S D
Sbjct: 1202 ELRQ--NILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQF--NSRFVVTSSDD 1257
Query: 527 KTVRLWDVSSGECVRIFI-----GHRSMILSLAMSPDGRYMASGDEDGT----IMMWDL- 576
TV+LWDV +G+ +R + G ++ + + A G +GT +M+ D
Sbjct: 1258 GTVKLWDVKTGDFIRNLVALDSGGSGGVVWRIRANDTKLICAVGSRNGTEETKLMVLDFD 1317
Query: 577 ASGRCV 582
G CV
Sbjct: 1318 VEGACV 1323
Score = 151 (58.2 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 30/99 (30%), Positives = 54/99 (54%)
Query: 541 RIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCE 600
++ GH +++ + G + SG +D T+ +W +G+C+ L+GHT VW+ S
Sbjct: 988 KVLKGHDDHVIT-CLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMS-- 1044
Query: 601 GSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSL 639
G+++ SGS D T+K+WD+ + V + + T R L
Sbjct: 1045 GNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHL 1083
Score = 62 (26.9 bits), Expect = 6.5e-26, Sum P(3) = 6.5e-26
Identities = 42/165 (25%), Positives = 63/165 (38%)
Query: 239 RLEKTGLISDSEKAEGENKEAEIDENKKRPVEG----GKQGASIKKLKKDKAINATAKTS 294
RL L+ + ++AE I PV+ G GA+ L D+ ++ K
Sbjct: 254 RLSDEFLLGEEDQAENLALGRCIKSEPVNPVDDNPSEGDDGATCFSLH-DRLMSVRLKQM 312
Query: 295 RLEANTVST-APRVKPDLALPV-MPTEVEQSILEDLRNRVHLSSAALPSVSFYTFINTHN 352
L ANTVS +P + A P T S +R + S L + F T
Sbjct: 313 SLTANTVSNPSPAASANAAAPEEASTSNSSSTSSSALSRADIESMDL--IERRDF-ETEQ 369
Query: 353 GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGEND 397
L I + S+V+ + SL + MA + A SG +D
Sbjct: 370 RLTGGIILRTSSMVSQNKLNLSL-IKSMAGGSKAANGSGTANSDD 413
Score = 44 (20.5 bits), Expect = 6.5e-26, Sum P(3) = 6.5e-26
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 203 SDDAEIVTLIGSNQDAANQINQKEVHWGLLEDSLENRLE-KTGLIS 247
++D +V LI + D +++ L+ED E+ ++ TG IS
Sbjct: 155 NEDPPVVCLINDDDDDEEPEPEEDDEEELIEDEDEDAVDIVTGAIS 200
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 316 (116.3 bits), Expect = 7.9e-26, P = 7.9e-26
Identities = 66/202 (32%), Positives = 103/202 (50%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
++GH + SA FSP I ++S DT + LWS K +A Y GH V +QF+PQG+
Sbjct: 14 FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGN 73
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
AS+S D+T R+W +DR H + V V + + ++ T S DK++++W +
Sbjct: 74 LLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYR 133
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+ H + SPDGR + S ED TI +WD S +CV +
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVD 193
Query: 597 YSCEGSLLASGSADCTVKLWDV 618
+S G+ +AS +D V++WD+
Sbjct: 194 FSPNGTCIASAGSDHAVRIWDI 215
Score = 306 (112.8 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 69/234 (29%), Positives = 113/234 (48%)
Query: 410 RKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
RK + ++ H+ PV S FS G F++++S D +I++WS L H + V
Sbjct: 91 RKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCA 150
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
+F+P G S S D+T +IW Q + + + + V + N IA+ SD V
Sbjct: 151 KFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAV 210
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
R+WD+ ++ + H + L+ P G + + DGT+ + DL GR + L GHT
Sbjct: 211 RIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHT 270
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLP 643
V+T+++S +G L SG AD V +W + + + K RL L+ P
Sbjct: 271 GPVFTVSFSKDGELFTSGGADAQVLVWRTSFNQVHYRDPSKRNLKRLH-LEASP 323
Score = 304 (112.1 bits), Expect = 2.1e-24, P = 2.1e-24
Identities = 67/221 (30%), Positives = 110/221 (49%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
R+Y Y GH V S FSP G+ + S+S D T+RLW +K H PV V F
Sbjct: 52 RAYR-YVGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDF 110
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+ G + ++S D++ ++WSM R + L + H V C ++ + I + S DKT+++
Sbjct: 111 SADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 532 WDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSC 591
WD +S +CV F + SP+G +AS D + +WD+ R + H+
Sbjct: 171 WDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCG 230
Query: 592 VWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
V L++ G+ L + S+D TVK+ D+ + + +G
Sbjct: 231 VNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTG 271
Score = 242 (90.2 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 69/253 (27%), Positives = 116/253 (45%)
Query: 340 PSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQ-----------QAV 388
P Y ++ + + S G+L+A D ++++W + + G+ ++V
Sbjct: 49 PHARAYRYVGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSV 108
Query: 389 SSGLQGENDTTPREDI---IGPNGRKRS-YTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
G+ T ED + R+R Y+LY+ H+ V A FSP G I+S S D T
Sbjct: 109 DFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 445 IRLWSTKLNANLVCYKGHNYPVWD---VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIM 501
I++W T + C + V V F+P G AS+ D RIW + + L+
Sbjct: 168 IKIWDT---TSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHY 224
Query: 502 AGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRY 561
H V+C+ +H + N + T SSD TV++ D+ G + GH + +++ S DG
Sbjct: 225 QVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGEL 284
Query: 562 MASGDEDGTIMMW 574
SG D +++W
Sbjct: 285 FTSGGADAQVLVW 297
Score = 217 (81.4 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 51/174 (29%), Positives = 82/174 (47%)
Query: 459 YKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCN 518
+KGH + F+P A++S D +WS+ GH V +++ N
Sbjct: 14 FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGN 73
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
+A+ S DKTVRLW + F H + + S+ S DG+++ + ED +I +W +
Sbjct: 74 LLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYR 133
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
R + L HT V +S +G L+ S S D T+K+WD T+ V + G
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVG 187
Score = 175 (66.7 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 35/120 (29%), Positives = 59/120 (49%)
Query: 499 RIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPD 558
R GH + + + NC IAT S D + LW + ++GH+ ++ SL SP
Sbjct: 12 RYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQ 71
Query: 559 GRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
G +AS D T+ +W L + HT+ V ++ +S +G L + S D ++K+W +
Sbjct: 72 GNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSM 131
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 300 (110.7 bits), Expect = 8.9e-26, P = 8.9e-26
Identities = 69/218 (31%), Positives = 108/218 (49%)
Query: 385 QQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
++ S G G+ P+E I P Y L GH PV F P+ ++S+S D T
Sbjct: 12 EEFTSGGPLGQK-RDPKEWIPRP---PEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDAT 66
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
I++W + KGH V D+ F+ G AS S D T ++W + +R M GH
Sbjct: 67 IKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 126
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
+V V N ++I + S DKT+++W+V +G CV+ F GHR + + + DG +AS
Sbjct: 127 DHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 186
Query: 565 GDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS 602
D T+ +W +A+ C L H V ++++ E S
Sbjct: 187 CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 224
Score = 272 (100.8 bits), Expect = 9.5e-23, P = 9.5e-23
Identities = 60/186 (32%), Positives = 96/186 (51%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH PV V F+P S+S D T ++W + R + GH V + + + +
Sbjct: 41 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 100
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+ S+D T++LWD EC+R GH + S+A+ P+G ++ S D TI MW++ +G
Sbjct: 101 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 160
Query: 581 CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLK 640
CV GH V + + +G+L+AS S D TV++W V +TK K E + + + +
Sbjct: 161 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV--ATKECKAELREHEHVVECIS 218
Query: 641 TLPTKS 646
P S
Sbjct: 219 WAPESS 224
Score = 214 (80.4 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 66/229 (28%), Positives = 105/229 (45%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH V S + P GD I+S+S D TI++W + + + GH V V+ N G
Sbjct: 125 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 184
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY--IATGSSDKTVRLWDVSS 536
AS S+D+T R+W + + + H V+C+ W +Y I+ + +T + S
Sbjct: 185 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK-----S 239
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
G+ P G ++ SG D TI MWD+++G C+ L+GH + V +
Sbjct: 240 GK------------------P-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL 280
Query: 597 YSCEGSLLASGSADCTVKLWDVTTST--KVLKTEEKSGTNRLRSLKTLP 643
+ G + S + D T+++WD K L E T+ L KT P
Sbjct: 281 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS-LDFHKTAP 328
Score = 201 (75.8 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 45/153 (29%), Positives = 78/153 (50%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V SF G + S SAD TI+LW + + GH++ V V P G +
Sbjct: 82 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 141
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
S+S D+T ++W + ++ GH V VR + + IA+ S+D+TVR+W V++
Sbjct: 142 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 201
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT 570
EC H ++ ++ +P+ Y + + G+
Sbjct: 202 ECKAELREHEHVVECISWAPESSYSSISEATGS 234
Score = 192 (72.6 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 68/278 (24%), Positives = 118/278 (42%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNG-----RKR 412
S G L+A +D ++K+WD G + + + + G + I+ PNG R
Sbjct: 92 SFDHSGKLLASCSADMTIKLWDFQ--GFECIRT-MHGHDHNVSSVAIM-PNGDHIVSASR 147
Query: 413 SYTL-------------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
T+ + GH V + G I S S D T+R+W
Sbjct: 148 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 207
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
+ H + V + + P+ Y SS + T S + +G +
Sbjct: 208 REHEHVVECISWAPESSY--SSISEATG---SETK------KSGKPGP-----------F 245
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
+ +GS DKT+++WDVS+G C+ +GH + + + G+++ S +D T+ +WD +
Sbjct: 246 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 305
Query: 580 RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
RC+ L H V +L + + +GS D TVK+W+
Sbjct: 306 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 189 (71.6 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 37/120 (30%), Positives = 62/120 (51%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
++GH S V V +H + + + S D T+++WD +G+ R GH + ++ G+
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 98
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+AS D TI +WD C+ + GH V ++A G + S S D T+K+W+V T
Sbjct: 99 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 158
Score = 188 (71.2 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 51/188 (27%), Positives = 88/188 (46%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A + + L+ E++
Sbjct: 164 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT---KECKAELR-EHEHVVECISW 219
Query: 406 GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
P SY+ +G S P G F+LS S D TI++W L+ GH+
Sbjct: 220 APES---SYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 275
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
V V F+ G + S + D+T R+W + ++ + H V + +H Y+ TGS
Sbjct: 276 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 335
Query: 526 DKTVRLWD 533
D+TV++W+
Sbjct: 336 DQTVKVWE 343
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 316 (116.3 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 75/278 (26%), Positives = 130/278 (46%)
Query: 354 LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSG----LQGENDTTPREDIIGPNG 409
++CA + + +A G D SL +W++A + G + G N P ++ +
Sbjct: 21 ISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVN-FAPSGSLVASSS 79
Query: 410 R-----------KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVC 458
R K T+++ H+ V S FS G ++++S D ++++W + L
Sbjct: 80 RDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYS 139
Query: 459 YKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCN 518
H V +F+P G AS DRT R+W Q + I + V ++ +
Sbjct: 140 LNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGT 199
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
IA+ +D T+++WD+ + + ++ + H + + + P G Y+ SG D TI + DL
Sbjct: 200 CIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLE 259
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
GR + L GH V T+ +S +G L ASG AD V +W
Sbjct: 260 GRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMW 297
Score = 314 (115.6 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 61/202 (30%), Positives = 106/202 (52%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
+ GH+ + +F+P G + SSS D T+RLW+ + +K H V V F+ G
Sbjct: 56 FVGHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQ 115
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
++S D++ ++W ++R + L + H + V C R+ + IA+ D+TVRLWD SS
Sbjct: 116 RLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSS 175
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+C+ IF + + + G +AS D TI +WD+ + + + H + V +
Sbjct: 176 HQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFS 235
Query: 597 YSCEGSLLASGSADCTVKLWDV 618
+ G+ L SGS+D T+K+ D+
Sbjct: 236 FHPSGNYLISGSSDSTIKILDL 257
Score = 287 (106.1 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 57/205 (27%), Positives = 101/205 (49%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
++GH + A F+P + + S D ++ +W+ A + GH + V F P G
Sbjct: 14 FKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGS 73
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
ASSS D+T R+W+ + H + V V + + + T S DK+V++W V
Sbjct: 74 LVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVER 133
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+ + H + + SPDGR +AS +D T+ +WD +S +C+ + +
Sbjct: 134 KKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVD 193
Query: 597 YSCEGSLLASGSADCTVKLWDVTTS 621
++ G+ +AS AD T+K+WD+ T+
Sbjct: 194 FNSSGTCIASSGADNTIKIWDIRTN 218
Score = 271 (100.5 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 69/250 (27%), Positives = 119/250 (47%)
Query: 340 PSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAV----SSGLQ-- 393
P + F+ + + + + GSLVA D ++++W + G+ V ++ ++
Sbjct: 49 PKARAFRFVGHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSV 108
Query: 394 -----GENDTTPRED----IIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
G+ T +D + G +K Y+L + H+ V A FSP G I S D T
Sbjct: 109 HFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNR-HTNWVRCARFSPDGRLIASCGDDRT 167
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
+RLW T + + + + V FN G ASS D T +IW + + ++ H
Sbjct: 168 VRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVH 227
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
+ V+C +H + NY+ +GSSD T+++ D+ G + GH+ +L++ S DG AS
Sbjct: 228 NAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFAS 287
Query: 565 GDEDGTIMMW 574
G D ++MW
Sbjct: 288 GGADSQVLMW 297
Score = 174 (66.3 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 42/145 (28%), Positives = 72/145 (49%)
Query: 499 RIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPD 558
R GH + C ++ N +ATGS DK++ +W+++ F+GH +I + +P
Sbjct: 12 RHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPS 71
Query: 559 GRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
G +AS D T+ +W + T HT+ V ++ +S +G L + S D +VK+W V
Sbjct: 72 GSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGV 131
Query: 619 TTSTKVLKTEEKSGTNRLRSLKTLP 643
K L + + TN +R + P
Sbjct: 132 ERK-KFLYSLNRH-TNWVRCARFSP 154
Score = 139 (54.0 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 46/179 (25%), Positives = 77/179 (43%)
Query: 344 FYTFINTH-NGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGEN---DTT 399
F +N H N + CA S DG L+A D ++++WD + + + G D
Sbjct: 136 FLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFN 195
Query: 400 PREDIIGPNGRKRSYTL-----------YQGHSGPVYSASFSPLGDFILSSSADTTIRLW 448
I +G + + Y+ H+ V SF P G++++S S+D+TI++
Sbjct: 196 SSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKIL 255
Query: 449 STKLNANLV-CYKGHNYPVWDVQFNPQGHYFASSSHDRTARIW--SMDRIQPLRIMAGH 504
L L+ GH PV V F+ G FAS D +W + D + +++ H
Sbjct: 256 DL-LEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWKTNFDSLNYRELLSKH 313
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 315 (115.9 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 66/210 (31%), Positives = 108/210 (51%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
++GH + S FSP G + + S DT + LWS + A Y GH + VQF+P G+
Sbjct: 14 FKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGN 73
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
AS+S DRT R+W D+ H + V V + + ++A+ S DK++++W++
Sbjct: 74 LLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYR 133
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+ H + SPDGR + S ED TI +WD + +CV +A
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVA 193
Query: 597 YSCEGSLLASGSADCTVKLWDVTTSTKVLK 626
++ G+ +AS +D TVK+WD+ + K+L+
Sbjct: 194 FNPNGTCIASAGSDHTVKIWDIRVN-KLLQ 222
Score = 312 (114.9 bits), Expect = 2.5e-25, P = 2.5e-25
Identities = 70/230 (30%), Positives = 113/230 (49%)
Query: 407 PNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPV 466
P+ R +S + ++ H+ PV S FS G F+ S+S D +I++W+ L H + V
Sbjct: 89 PDKRGKS-SEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWV 147
Query: 467 WDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSD 526
+F+P G S S D+T +IW Q + + + + V ++ N IA+ SD
Sbjct: 148 RCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSD 207
Query: 527 KTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLM 586
TV++WD+ + ++ + H + ++ P G Y+ + DGT+ + DL GR + L
Sbjct: 208 HTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ 267
Query: 587 GHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRL 636
GHT V+T+++S G L SG AD V LW K K RL
Sbjct: 268 GHTGPVFTVSFSKGGELFTSGGADAQVLLWRTNFDELNYKDVSKRNLKRL 317
Score = 307 (113.1 bits), Expect = 9.5e-25, P = 9.5e-25
Identities = 64/216 (29%), Positives = 111/216 (51%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
Y GH + S FSPLG+ + S+S D TIRLW +K H PV V F+ G
Sbjct: 56 YVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQ 115
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
+ AS+S D++ ++W+M R + L + H V C ++ + I + S DKT+++WD ++
Sbjct: 116 FLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN 175
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+CV F +A +P+G +AS D T+ +WD+ + + H+ V ++
Sbjct: 176 KQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVS 235
Query: 597 YSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
+ G+ L + S+D T+K+ D+ + + +G
Sbjct: 236 FHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTG 271
Score = 240 (89.5 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 70/253 (27%), Positives = 116/253 (45%)
Query: 340 PSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQ-----------QAV 388
P + ++ + + S G+L+A D ++++W K G+ ++V
Sbjct: 49 PQARAFRYVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSV 108
Query: 389 SSGLQGENDTTPREDI---IGPNGRKRS-YTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
G+ + ED + R+R Y+LY+ H+ V A FSP G I+S S D T
Sbjct: 109 DFSADGQFLASASEDKSIKVWNMYRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 445 IRLWSTKLNANLVCYKGHNYPVWD---VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIM 501
I++W T N C + V V FNP G AS+ D T +IW + + L+
Sbjct: 168 IKIWDT---TNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHY 224
Query: 502 AGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRY 561
H V+CV +H + NY+ T SSD T+++ D+ G + GH + +++ S G
Sbjct: 225 QVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGEL 284
Query: 562 MASGDEDGTIMMW 574
SG D +++W
Sbjct: 285 FTSGGADAQVLLW 297
Score = 166 (63.5 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 37/120 (30%), Positives = 61/120 (50%)
Query: 499 RIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPD 558
R GH + + V + N +ATGS D + LW + ++GH+ +I S+ SP
Sbjct: 12 RYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPL 71
Query: 559 GRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
G +AS D TI +W + HT+ V ++ +S +G LAS S D ++K+W++
Sbjct: 72 GNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNM 131
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 49/193 (25%), Positives = 82/193 (42%)
Query: 360 SQDGSLVAGGFSDSSLKVWDMAK------LGQ-----QAVSSGLQGENDTTPREDI---I 405
S DG +A D S+KVW+M + L + + G + ED I
Sbjct: 111 SADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 406 GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
K+ + G +F+P G I S+ +D T+++W ++N L Y+ H+
Sbjct: 171 WDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGG 230
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
V V F+P G+Y ++S D T +I + + + + GH V V + +G +
Sbjct: 231 VNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGA 290
Query: 526 DKTVRLWDVSSGE 538
D V LW + E
Sbjct: 291 DAQVLLWRTNFDE 303
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 312 (114.9 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 67/210 (31%), Positives = 107/210 (50%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
++GH + S SP G + ++S DT + LW+ K +A Y GH V VQF+P G+
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGN 73
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
AS+S DRT R+W D+ H + V V + + ++AT S DK++++W +
Sbjct: 74 LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYR 133
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+ H + SPDGR + S ED TI +WD + +CV +
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 193
Query: 597 YSCEGSLLASGSADCTVKLWDVTTSTKVLK 626
++ G+ +AS +D TVK+WDV + K+L+
Sbjct: 194 FNPSGTCIASAGSDQTVKVWDVRVN-KLLQ 222
Score = 308 (113.5 bits), Expect = 4.0e-25, P = 4.0e-25
Identities = 73/239 (30%), Positives = 122/239 (51%)
Query: 410 RKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
++ ++ ++ H+ PV S FS G F+ ++S D +I++WS L H + V
Sbjct: 91 KRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCA 150
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
+F+P G S S D+T +IW Q + + + + V ++ + IA+ SD+TV
Sbjct: 151 KFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTV 210
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
++WDV + ++ + H + ++ P Y+ + DGT+ + DL GR + L GHT
Sbjct: 211 KVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHT 270
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTP 648
V+T+++S G L ASG AD V LW T+ L + G N+ R+LK L S P
Sbjct: 271 GPVFTVSFSKGGELFASGGADTQVLLW--RTNFDELHCK---GLNK-RNLKRLHFDSPP 323
Score = 292 (107.8 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 63/221 (28%), Positives = 110/221 (49%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
R+Y Y GH V S FSP G+ + S+S D T+RLW +K H PV V F
Sbjct: 52 RAYR-YVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDF 110
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+ G + A++S D++ ++WSM R + L + H V C ++ + I + S DKT+++
Sbjct: 111 SADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 532 WDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSC 591
WD ++ +CV F + +P G +AS D T+ +WD+ + + H+
Sbjct: 171 WDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG 230
Query: 592 VWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
V +++ + L + S+D T+K+ D+ + + +G
Sbjct: 231 VNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTG 271
Score = 255 (94.8 bits), Expect = 6.8e-19, P = 6.8e-19
Identities = 71/253 (28%), Positives = 118/253 (46%)
Query: 340 PSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQ-----------QAV 388
P Y ++ + + S G+L+A D ++++W K G+ ++V
Sbjct: 49 PHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSV 108
Query: 389 SSGLQGENDTTPREDI---IGPNGRKRS-YTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
G+ T ED + R+R Y+LY+ H+ V A FSP G I+S S D T
Sbjct: 109 DFSADGQFLATASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 445 IRLWSTKLNANLVCYKGHNYPVWD---VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIM 501
I++W T N C + V V FNP G AS+ D+T ++W + + L+
Sbjct: 168 IKIWDT---TNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHY 224
Query: 502 AGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRY 561
H V+C+ +H + NY+ T SSD T+++ D+ G + GH + +++ S G
Sbjct: 225 QVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGEL 284
Query: 562 MASGDEDGTIMMW 574
ASG D +++W
Sbjct: 285 FASGGADTQVLLW 297
Score = 153 (58.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 32/120 (26%), Positives = 58/120 (48%)
Query: 499 RIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPD 558
R GH + + + N +AT S D + LW+ ++GH+ ++ S+ SP
Sbjct: 12 RYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPH 71
Query: 559 GRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
G +AS D T+ +W + HT+ V ++ +S +G LA+ S D ++K+W +
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Score = 140 (54.3 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 48/193 (24%), Positives = 80/193 (41%)
Query: 360 SQDGSLVAGGFSDSSLKVWDMAK------LGQ-----QAVSSGLQGENDTTPREDI---I 405
S DG +A D S+KVW M + L + + G + ED I
Sbjct: 111 SADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 406 GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
K+ + G F+P G I S+ +D T+++W ++N L Y+ H+
Sbjct: 171 WDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG 230
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
V + F+P +Y ++S D T +I + + + + GH V V + A+G +
Sbjct: 231 VNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGA 290
Query: 526 DKTVRLWDVSSGE 538
D V LW + E
Sbjct: 291 DTQVLLWRTNFDE 303
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 298 (110.0 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 74/239 (30%), Positives = 112/239 (46%)
Query: 387 AVSSGL-QGENDTTPREDI-IGP---NGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSA 441
A SG G+ TP + GP + + L GH G VY F P G + S+
Sbjct: 28 AAGSGPGAGQQQATPGALLQTGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGF 87
Query: 442 DTTIRLWSTKLNA-NLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRI 500
D I LWS + N KGH+ V ++ +N G S+S D+T +W + + ++
Sbjct: 88 DRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR 147
Query: 501 MAGHLSDVD-CVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDG 559
+ GH S V+ C + TGS D TV+LWD+ ++ F + +L++ +
Sbjct: 148 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTS 206
Query: 560 RYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
+ SG D I +WDL + + GH V L+ S EGS L S + D TV++WDV
Sbjct: 207 DQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 211 (79.3 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 53/215 (24%), Positives = 99/215 (46%)
Query: 413 SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPV---WDV 469
+Y +GHSG V ++ G + S+S D T+ +W ++ + KGH V +
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 161
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
+ PQ + S D T ++W + + ++ + V V ++ + I +G D +
Sbjct: 162 RRGPQ--LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDI 218
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA----SGRCVTPL 585
++WD+ + GH + L++S +G Y+ S D T+ +WD+ RCV
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIF 278
Query: 586 MGHT----SCVWTLAYSCEGSLLASGSADCTVKLW 616
G+ + ++S +GS +A+GSAD + W
Sbjct: 279 QGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPW 313
Score = 175 (66.7 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 54/203 (26%), Positives = 88/203 (43%)
Query: 418 QGHSGPVYSASFSPLG-DFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
+GH+ V S + G + + S D T++LW + A + ++ + Y V V FN
Sbjct: 149 KGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSD 207
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS- 535
S D ++W + + + M GH V + +Y+ + + D TVR+WDV
Sbjct: 208 QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 267
Query: 536 ---SGECVRIFIGH----RSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
CV+IF G+ +L + SPDG +A+G D + W S R + + H
Sbjct: 268 FAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPWHSLSVRSLGQIPRH 327
Query: 589 T-SCVWTLAYSCEGSLLASGSAD 610
S EG + S S+D
Sbjct: 328 RLSRQEDSVKPQEGIXILSASSD 350
Score = 135 (52.6 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 49/205 (23%), Positives = 90/205 (43%)
Query: 381 AKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSS 440
A+ G Q V +G ++ T DI +K + +Q ++ V + +F+ D I+S
Sbjct: 161 ARRGPQLVCTG--SDDGTVKLWDI----RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGG 213
Query: 441 ADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQP--- 497
D I++W + N +GH V + + +G Y S++ D T R+W + P
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 273
Query: 498 -LRIMAG--HLSDVDCVR--WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILS 552
++I G H + + +R W + + IA GS+D + W S + HR
Sbjct: 274 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPWHSLSVRSLGQIPRHRLSRQE 333
Query: 553 LAMSP-DGRYMASGDEDGTIMMWDL 576
++ P +G + S D + M ++
Sbjct: 334 DSVKPQEGIXILSASSDKRLYMGEI 358
Score = 130 (50.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 29/87 (33%), Positives = 43/87 (49%)
Query: 540 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRC--VTPLMGHTSCVWTLAY 597
+ + GH + P+G +AS D I++W + G C L GH+ V L Y
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVY-GDCDNYATLKGHSGAVMELHY 118
Query: 598 SCEGSLLASGSADCTVKLWDVTTSTKV 624
+ +GS+L S S D TV +WD T +V
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERV 145
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 298 (110.0 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 75/228 (32%), Positives = 115/228 (50%)
Query: 419 GHSGPVYSASFSPLG-DFILSSSADTTIRLWS-TKLNANLV-----CYKGHNYPVWDVQF 471
GH+G V S + SP D I+SSS D T+ +W T +A KGH++ V DV
Sbjct: 19 GHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVI 78
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+ G + S S D T R+W + + R+ GH DV V + + I +GS D T+++
Sbjct: 79 SHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKV 138
Query: 532 WDVSSGECVRIFIG---HRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
W+ + GEC G H+ + + SP+ + SG D + +WD+ S +C L H
Sbjct: 139 WN-TLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDH 197
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRL 636
T V T+ S +GSL ASG D LW++++ + K E ++ N L
Sbjct: 198 TGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNTINAL 245
Score = 270 (100.1 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 70/224 (31%), Positives = 104/224 (46%)
Query: 399 TPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVC 458
TP D P RS +GHS V S G F LS S D T+RLW +
Sbjct: 52 TPT-DATSPGKAHRSL---KGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRL 107
Query: 459 YKGHNYPVWDVQFNPQGHYFASSSHDRTARIWS-MDRIQ-PLRIMAGHLSDVDCVRWHIN 516
+KGH V V F+ S S D T ++W+ + + L H V C+R+ N
Sbjct: 108 FKGHTQDVMSVAFSSDNRQIISGSRDATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPN 167
Query: 517 CNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
I +GS D V++WD+ S +C H + ++ +SPDG ASG +D +W+L
Sbjct: 168 TPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWEL 227
Query: 577 ASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+SG+ + L + + LA+S L S + D + +WD+ T
Sbjct: 228 SSGKPLYKLEARNT-INALAFSPNKYWL-SAATDDKIIIWDLLT 269
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 31/92 (33%), Positives = 48/92 (52%)
Query: 544 IGHRSMILSLAMSPDGR-YMASGDEDGTIMMWDLASGRCVTP------LMGHTSCVWTLA 596
+GH + S+A+SP+ + S D T+M+W L +P L GH+ V +
Sbjct: 18 VGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVV 77
Query: 597 YSCEGSLLASGSADCTVKLWDVT--TSTKVLK 626
S +G SGS D T++LWD+T ST++ K
Sbjct: 78 ISHDGQFALSGSWDNTLRLWDITKGVSTRLFK 109
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 313 (115.2 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 68/210 (32%), Positives = 107/210 (50%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
++GH + SA FSP I ++S DT + LWS K +A Y GH V +QF+PQG+
Sbjct: 14 FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGN 73
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
AS+S DRT R+W +DR H + V V + + + T S DK++++W +
Sbjct: 74 LLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFR 133
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+ H + SPDGR + S ED TI +WD + +CV +
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 193
Query: 597 YSCEGSLLASGSADCTVKLWDVTTSTKVLK 626
++ G+ +AS +D VK+WD+ + K+L+
Sbjct: 194 FNPNGTCIASAGSDHAVKIWDIRMN-KLLQ 222
Score = 300 (110.7 bits), Expect = 6.2e-24, P = 6.2e-24
Identities = 64/207 (30%), Positives = 106/207 (51%)
Query: 410 RKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
RK + ++ H+ PV S FS G ++++S D +I++WS L H + V
Sbjct: 91 RKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCA 150
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
+F+P G S S D+T +IW Q + + + + V ++ N IA+ SD V
Sbjct: 151 KFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAV 210
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
++WD+ + ++ + H + L+ P G + + DGT+ M DL GR + L GHT
Sbjct: 211 KIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHT 270
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLW 616
V+T+++S +G LL SG AD V +W
Sbjct: 271 GPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 287 (106.1 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 64/221 (28%), Positives = 109/221 (49%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
R+Y Y GH V S FSP G+ + S+S D T+RLW +K H PV V F
Sbjct: 52 RAYR-YVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDF 110
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+ G ++S D++ ++WSM R + L + H V C ++ + I + S DKT+++
Sbjct: 111 SADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 532 WDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSC 591
WD ++ +CV F + +P+G +AS D + +WD+ + + H+
Sbjct: 171 WDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCG 230
Query: 592 VWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
V L++ G+ L + S+D TVK+ D+ + + +G
Sbjct: 231 VNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTG 271
Score = 246 (91.7 bits), Expect = 8.6e-18, P = 8.6e-18
Identities = 70/253 (27%), Positives = 116/253 (45%)
Query: 340 PSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQ-----------QAV 388
P Y ++ + + S G+L+A D ++++W + + G+ ++V
Sbjct: 49 PHARAYRYVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSV 108
Query: 389 SSGLQGENDTTPREDI---IGPNGRKRS-YTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
G+ T ED + R+R Y+LY+ H+ V A FSP G I+S S D T
Sbjct: 109 DFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 445 IRLWSTKLNANLVCYKGHNYPVWD---VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIM 501
I++W T N C + V V FNP G AS+ D +IW + + L+
Sbjct: 168 IKIWDT---TNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHY 224
Query: 502 AGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRY 561
H V+C+ +H N + T SSD TV++ D+ G + GH + +++ S DG
Sbjct: 225 QVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGEL 284
Query: 562 MASGDEDGTIMMW 574
+ SG D +++W
Sbjct: 285 LTSGGADAQVLIW 297
Score = 209 (78.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 50/174 (28%), Positives = 80/174 (45%)
Query: 459 YKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCN 518
+KGH + F+P A++S D +WS+ GH V +++ N
Sbjct: 14 FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGN 73
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
+A+ S D+TVRLW + F H + + S+ S DG+ + + ED +I +W +
Sbjct: 74 LLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFR 133
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
R + L HT V +S +G L+ S S D T+K+WD T V + G
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG 187
Score = 178 (67.7 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 36/120 (30%), Positives = 60/120 (50%)
Query: 499 RIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPD 558
R GH + + + NC IAT S D + LW + ++GH+ ++ SL SP
Sbjct: 12 RSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQ 71
Query: 559 GRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
G +AS D T+ +W L + HT+ V ++ +S +G LL + S D ++K+W +
Sbjct: 72 GNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSM 131
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 297 (109.6 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 66/205 (32%), Positives = 101/205 (49%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA-NLVCYKGHNYPVWDVQFNPQ 474
L GH G VY F P G+ + S+ D I LW+ + N KGH+ V ++ +N
Sbjct: 88 LLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 147
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVD-CVRWHINCNYIATGSSDKTVRLWD 533
G S+S D+T +W + + ++ + GH S V+ C + TGS D TV+LWD
Sbjct: 148 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 207
Query: 534 VSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVW 593
+ V+ F + +L++ + + SG D I +WDL + + GH V
Sbjct: 208 IRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 266
Query: 594 TLAYSCEGSLLASGSADCTVKLWDV 618
L+ S EGS L S + D TV++WDV
Sbjct: 267 GLSLSSEGSYLLSNAMDNTVRIWDV 291
Score = 233 (87.1 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 59/224 (26%), Positives = 106/224 (47%)
Query: 413 SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPV---WDV 469
+Y +GHSG V ++ G + S+S D T+ +W ++ + KGH V +
Sbjct: 128 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 187
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
+ PQ + S D T ++W + + ++ + V V ++ + I +G D +
Sbjct: 188 RRGPQ--LVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDI 244
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA----SGRCVTPL 585
++WD+ + GH + L++S +G Y+ S D T+ +WD+ RCV
Sbjct: 245 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIF 304
Query: 586 MGHT----SCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
G+ + ++S +GS +A GSAD V +WD TTS ++L
Sbjct: 305 QGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWD-TTSRRIL 347
Score = 220 (82.5 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 58/202 (28%), Positives = 93/202 (46%)
Query: 418 QGHSGPVYSASFSPLG-DFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
+GH+ V S + G + + S D T++LW + A + ++ + Y V V FN
Sbjct: 175 KGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSD 233
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS- 535
S D ++W + + + M GH V + +Y+ + + D TVR+WDV
Sbjct: 234 QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRP 293
Query: 536 ---SGECVRIFIGH----RSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
CV+IF G+ +L + SPDG +A G D + +WD S R + L GH
Sbjct: 294 FAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGH 353
Query: 589 TSCVWTLAYSCEGSLLASGSAD 610
V LA+ E ++ S S+D
Sbjct: 354 AGSVNELAFHPEEPIILSASSD 375
Score = 199 (75.1 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 46/171 (26%), Positives = 86/171 (50%)
Query: 450 TKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSM-DRIQPLRIMAGHLSDV 508
+ L A ++ GH V+ +F+P G+ AS+ DR +W++ + GH V
Sbjct: 80 SSLQAPIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAV 139
Query: 509 DCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDG-RYMASGDE 567
+ ++ + + + + S+DKTV +WD +GE V+ GH S + S + G + + +G +
Sbjct: 140 MELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSD 199
Query: 568 DGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
DGT+ +WD+ V +T V + ++ + SG D +K+WD+
Sbjct: 200 DGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 249
Score = 194 (73.4 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 44/131 (33%), Positives = 69/131 (52%)
Query: 497 PLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGEC--VRIFIGHRSMILSLA 554
P+ +++GH +V C ++H N +A+ D+ + LW+V G+C GH ++ L
Sbjct: 85 PIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELH 143
Query: 555 MSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEG-SLLASGSADCTV 613
+ DG + S D T+ +WD +G V L GHTS V + + G L+ +GS D TV
Sbjct: 144 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 203
Query: 614 KLWDVTTSTKV 624
KLWD+ V
Sbjct: 204 KLWDIRKKAAV 214
Score = 176 (67.0 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 53/204 (25%), Positives = 94/204 (46%)
Query: 381 AKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSS 440
A+ G Q V +G ++ T DI +K + +Q ++ V + +F+ D I+S
Sbjct: 187 ARRGPQLVCTG--SDDGTVKLWDI----RKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGG 239
Query: 441 ADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQP--- 497
D I++W + N +GH V + + +G Y S++ D T RIW + P
Sbjct: 240 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKER 299
Query: 498 -LRIMAG--HLSDVDCVR--WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILS 552
++I G H + + +R W + + IA GS+D+ V +WD +S + GH +
Sbjct: 300 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNE 359
Query: 553 LAMSPDGRYMASGDEDGTIMMWDL 576
LA P+ + S D + M ++
Sbjct: 360 LAFHPEEPIILSASSDKRLYMGEI 383
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 313 (115.2 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 76/229 (33%), Positives = 109/229 (47%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA-NLVCYKGHNYPVWDVQFNPQGH 476
+GHS V S +FSP G ++ S S DTT+R W + C KGH + V + ++P G
Sbjct: 111 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC-KGHRHWVLSISWSPDGK 169
Query: 477 YFASSSHDRTARIWSMDR-IQPLRIMAGHLSDVDCVRW---HIN--CNYIATGSSDKTVR 530
AS + +W +Q R + GH + + W H+N C Y+A+ S D +VR
Sbjct: 170 KLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVR 229
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
+WD ++G C RI GH + L DG + S +D TI +W G L GH
Sbjct: 230 VWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGH 288
Query: 591 CVWTLAYSCEGSLLASG--SADCTVKLWDVTTSTKVLKTEEKSGTNRLR 637
V T+A S + +L A+ TV D+ S K LK S N +R
Sbjct: 289 WVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVR 337
Score = 223 (83.6 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 67/267 (25%), Positives = 128/267 (47%)
Query: 366 VAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPR---EDIIGPNGRKRSYTLYQGHSG 422
VA D S++VWD + + +G ++ T R + ++ + R+ +++ H G
Sbjct: 219 VASSSKDGSVRVWDTTAGRCERILTG-HTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG 277
Query: 423 PVYSASFSPLGDFI--LSSSADTTIRLWS---TKLNANLVCYKGHNYPVWD---VQFN-- 472
V + G ++ ++ S D +R + + N +G + + ++N
Sbjct: 278 -VLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLV 336
Query: 473 -PQG-HYFASSSHDRTARIWS-MDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
QG S S D T +WS + +PL M GH + ++ V + + +A+ S DK++
Sbjct: 337 RGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSI 396
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
+LWD +G+ + GH + + +A S D R + SG D T+ +WD+ + + T L GH
Sbjct: 397 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHA 456
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLW 616
V+ + +S +G +ASG D +++W
Sbjct: 457 DEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 209 (78.6 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 60/212 (28%), Positives = 105/212 (49%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFIL-SSSADTTIRLWSTKLNANLVC--YKGHNYPVWD 468
R + GH+ V + GD +L S+S D TI++W + + ++C +GH + V
Sbjct: 237 RCERILTGHTQSVTCLRWG--GDGLLYSASQDRTIKVW--RAHDGVLCRTLQGHGHWVNT 292
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSD-VDCVRWHINCNYIATGSSDK 527
+ + + A + + D L+ + S + VR + +GS D
Sbjct: 293 MALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQ-GPERLVSGSDDF 351
Query: 528 TVRLWDVSSGEC-VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLM 586
T+ LW + + + GH+++I + SPD R +AS D +I +WD +G+ + L
Sbjct: 352 TLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLR 411
Query: 587 GHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
GH + V+ +A+S + LL SGS+D T+K+WDV
Sbjct: 412 GHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV 443
Score = 205 (77.2 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 69/242 (28%), Positives = 103/242 (42%)
Query: 394 GENDTTPRE-DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLW--ST 450
G DTT R D+ + + +GH V S S+SP G + S + + LW ST
Sbjct: 132 GSGDTTVRFWDL----STETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPST 187
Query: 451 KLNANLVCYKGHNYPV----WD-VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHL 505
L GH+ + W+ + NP+ Y ASSS D + R+W + RI+ GH
Sbjct: 188 GLQVGRTL-TGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHT 246
Query: 506 SDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASG 565
V C+RW + + + S D+T+++W G R GH + ++A+S D
Sbjct: 247 QSVTCLRWGGD-GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGA 305
Query: 566 DE--DGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTK 623
E + T+ DL + L S + L L SGS D T+ LW K
Sbjct: 306 FEPAEATVNAQDLQGS--LKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKK 363
Query: 624 VL 625
L
Sbjct: 364 PL 365
Score = 195 (73.7 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 46/125 (36%), Positives = 71/125 (56%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
+ GH V V + Y+A+GS D TVR WD+S+ GHR +LS++ SPDG+
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGK 169
Query: 561 YMASGDEDGTIMMWDLASGRCV-TPLMGHTSCV----WT-LAYSCEGSLLASGSADCTVK 614
+ASG ++G +++WD ++G V L GH+ + W L + E +AS S D +V+
Sbjct: 170 KLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVR 229
Query: 615 LWDVT 619
+WD T
Sbjct: 230 VWDTT 234
Score = 160 (61.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 53/212 (25%), Positives = 97/212 (45%)
Query: 419 GHSGPVYSASFSPLG-----DFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNP 473
GHS + S+ PL ++ SSS D ++R+W T GH V +++
Sbjct: 197 GHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGG 256
Query: 474 QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY-IATGS---SDKTV 529
G + S+S DRT ++W R + GH V+ + ++ +Y + TG+ ++ TV
Sbjct: 257 DGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMA--LSTDYALRTGAFEPAEATV 313
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRC-VTPLMGH 588
D+ ++ S +L + SG +D T+ +W A + + + GH
Sbjct: 314 NAQDLQGS--LKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGH 371
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+ + + +S + ++AS S D ++KLWD T
Sbjct: 372 QALINQVLFSPDSRIVASASFDKSIKLWDGRT 403
Score = 160 (61.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 33/89 (37%), Positives = 50/89 (56%)
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS 598
C GH ++S+A SP G+Y+ASG D T+ WDL++ GH V ++++S
Sbjct: 106 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWS 165
Query: 599 CEGSLLASGSADCTVKLWDVTTSTKVLKT 627
+G LASG + V LWD +T +V +T
Sbjct: 166 PDGKKLASGCKNGQVLLWDPSTGLQVGRT 194
Score = 47 (21.6 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMA 381
+ S G +A G D++++ WD++
Sbjct: 121 AFSPTGKYLASGSGDTTVRFWDLS 144
Score = 41 (19.5 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 358 SISQDGSLVAGGFSDSSLKVWD 379
S S DG +A G + + +WD
Sbjct: 163 SWSPDGKKLASGCKNGQVLLWD 184
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 312 (114.9 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 71/221 (32%), Positives = 110/221 (49%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQG 475
++ GH +YS F+ G +I S S D T+RLW LV V V +P G
Sbjct: 353 IFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIA-EGKLVYTLSIEDGVTTVAMSPDG 411
Query: 476 HYFASSSHDRTARIWSMDR---IQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLW 532
Y A+ S D+T R+W ++ L GH V V + N + +GS DKT++LW
Sbjct: 412 LYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLW 471
Query: 533 DVS-----------SGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRC 581
+++ G+C R F GH+ +LS+ ++PDG ++ SG +D + WD +G
Sbjct: 472 ELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNA 531
Query: 582 VTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTST 622
L GH + V ++A S G+L A+GS D ++W + T
Sbjct: 532 QMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIWRYSAYT 572
Score = 274 (101.5 bits), Expect = 5.3e-21, Sum P(2) = 5.3e-21
Identities = 73/242 (30%), Positives = 116/242 (47%)
Query: 421 SGPVY--SASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
SG +Y S FSP G ++ + + D IR+W + GH ++ + F G Y
Sbjct: 314 SGDLYIRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYI 373
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSD-VDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
AS S D+T R+W D + + + D V V + Y+A GS DKTVR+WD ++G
Sbjct: 374 ASGSGDKTVRLW--DIAEGKLVYTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTG 431
Query: 538 ECVRIFI---GHRSMILSLAMSPDGRYMASGDEDGTIMMWDL-----------ASGRCVT 583
V GH+ + S+A +P+G+ + SG D TI +W+L G+C
Sbjct: 432 YLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHR 491
Query: 584 PLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD-VTTSTKVLKTEEKSGTNRLRSLKTL 642
GH V ++ + +G + SGS D V+ WD +T + +++ K N + S+
Sbjct: 492 TFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHK---NSVISVAPS 548
Query: 643 PT 644
PT
Sbjct: 549 PT 550
Score = 258 (95.9 bits), Expect = 6.9e-19, P = 6.9e-19
Identities = 64/187 (34%), Positives = 102/187 (54%)
Query: 452 LNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSD---- 507
L+ LV + H+ V V+F+ G Y A+ + R+A+I+ + Q + ++ D
Sbjct: 258 LDVELVHHLVHDSVVCCVRFSRDGKYLATGCN-RSAQIFDVTLGQNVAVLQDESVDKSGD 316
Query: 508 --VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASG 565
+ V + + Y+ATG+ DK +R+WD+++ IF GH I SL + +GRY+ASG
Sbjct: 317 LYIRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASG 376
Query: 566 DEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
D T+ +WD+A G+ V L V T+A S +G +A+GS D TV++WD TT V
Sbjct: 377 SGDKTVRLWDIAEGKLVYTLSIEDG-VTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVE 435
Query: 626 KTEEKSG 632
+ E G
Sbjct: 436 RLENPDG 442
Score = 121 (47.7 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 37/127 (29%), Positives = 56/127 (44%)
Query: 369 GFSDSSLKVWDMAKLGQQAVSSGLQGEND----TTPREDIIGPNGRKRSYTLYQGHSGPV 424
G DS V A G++ VS L PR+ + + ++GH V
Sbjct: 442 GHKDSVYSV-AFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFV 500
Query: 425 YSASFSPLGDFILSSSADTTIRLWSTKL-NANLVCYKGHNYPVWDVQFNPQGHYFASSSH 483
S +P G +++S S D ++ W NA ++ +GH V V +P G+ FA+ S
Sbjct: 501 LSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMML-QGHKNSVISVAPSPTGNLFATGSG 559
Query: 484 DRTARIW 490
D ARIW
Sbjct: 560 DMRARIW 566
Score = 67 (28.6 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 345 YTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWD 379
YT ++ +G+ ++S DG VA G D +++VWD
Sbjct: 394 YT-LSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWD 427
Score = 48 (22.0 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 356 CASISQDGSLVAGGFSDSSLKVWDMAKLGQQ-AV--SSGLQGENDTTPREDIIGPNGR 410
C S+DG +A G + S+ +++D+ LGQ AV + D R P+G+
Sbjct: 274 CVRFSRDGKYLATGCNRSA-QIFDVT-LGQNVAVLQDESVDKSGDLYIRSVCFSPDGK 329
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 308 (113.5 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 64/207 (30%), Positives = 109/207 (52%)
Query: 410 RKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
++ ++ ++ H+ PV S FS G F+ ++S D +I++WS L H + V
Sbjct: 49 KRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCA 108
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
+F+P G S S D+T +IW Q + + + + V ++ + IA+ SD+TV
Sbjct: 109 KFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTV 168
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
++WDV + ++ + H + ++ P G Y+ + DGT+ + DL GR + L GHT
Sbjct: 169 KVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHT 228
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLW 616
V+T+++S G L ASG AD V LW
Sbjct: 229 GPVFTVSFSKGGELFASGGADTQVLLW 255
Score = 298 (110.0 bits), Expect = 4.7e-24, P = 4.7e-24
Identities = 64/221 (28%), Positives = 111/221 (50%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
R+Y Y GH V S FSP G+ + S+S D T+RLW +K H PV V F
Sbjct: 10 RAYR-YVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDF 68
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+ G + A++S D++ ++WSM R + L + H V C ++ + I + S DKT+++
Sbjct: 69 SADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 128
Query: 532 WDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSC 591
WD ++ +CV F + +P G +AS D T+ +WD+ + + H+
Sbjct: 129 WDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG 188
Query: 592 VWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
V +++ G+ L + S+D T+K+ D+ + + +G
Sbjct: 189 VNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTG 229
Score = 267 (99.0 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 58/180 (32%), Positives = 91/180 (50%)
Query: 447 LWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLS 506
LW+ K +A Y GH V VQF+P G+ AS+S DRT R+W D+ H +
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 61
Query: 507 DVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGD 566
V V + + ++AT S DK++++W + + H + SPDGR + S
Sbjct: 62 PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 121
Query: 567 EDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLK 626
ED TI +WD + +CV + ++ G+ +AS +D TVK+WDV + K+L+
Sbjct: 122 EDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVN-KLLQ 180
Score = 254 (94.5 bits), Expect = 7.6e-19, P = 7.6e-19
Identities = 71/253 (28%), Positives = 118/253 (46%)
Query: 340 PSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQ-----------QAV 388
P Y ++ + + S G+L+A D ++++W K G+ ++V
Sbjct: 7 PHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSV 66
Query: 389 SSGLQGENDTTPREDI---IGPNGRKRS-YTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
G+ T ED + R+R Y+LY+ H+ V A FSP G I+S S D T
Sbjct: 67 DFSADGQFLATASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKT 125
Query: 445 IRLWSTKLNANLVCYKGHNYPVWD---VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIM 501
I++W T N C + V V FNP G AS+ D+T ++W + + L+
Sbjct: 126 IKIWDT---TNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHY 182
Query: 502 AGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRY 561
H V+C+ +H + NY+ T SSD T+++ D+ G + GH + +++ S G
Sbjct: 183 QVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGEL 242
Query: 562 MASGDEDGTIMMW 574
ASG D +++W
Sbjct: 243 FASGGADTQVLLW 255
Score = 146 (56.5 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 49/193 (25%), Positives = 81/193 (41%)
Query: 360 SQDGSLVAGGFSDSSLKVWDMAK------LGQ-----QAVSSGLQGENDTTPREDI---I 405
S DG +A D S+KVW M + L + + G + ED I
Sbjct: 69 SADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 128
Query: 406 GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
K+ + G F+P G I S+ +D T+++W ++N L Y+ H+
Sbjct: 129 WDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG 188
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
V + F+P G+Y ++S D T +I + + + + GH V V + A+G +
Sbjct: 189 VNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGA 248
Query: 526 DKTVRLWDVSSGE 538
D V LW + E
Sbjct: 249 DTQVLLWRTNFDE 261
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 312 (114.9 bits), Expect = 2.5e-25, P = 2.5e-25
Identities = 67/210 (31%), Positives = 107/210 (50%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
++GH + S SP G + ++S DT + LW+ K +A Y GH V VQF+P G+
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGN 73
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
AS+S DRT R+W D+ H + V V + + ++AT S DK++++W +
Sbjct: 74 LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYR 133
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+ H + SPDGR + S ED TI +WD + +CV +
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 193
Query: 597 YSCEGSLLASGSADCTVKLWDVTTSTKVLK 626
++ G+ +AS +D TVK+WDV + K+L+
Sbjct: 194 FNPSGTCIASAGSDQTVKVWDVRVN-KLLQ 222
Score = 308 (113.5 bits), Expect = 7.3e-25, P = 7.3e-25
Identities = 64/207 (30%), Positives = 109/207 (52%)
Query: 410 RKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
++ ++ ++ H+ PV S FS G F+ ++S D +I++WS L H + V
Sbjct: 91 KRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCA 150
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
+F+P G S S D+T +IW Q + + + + V ++ + IA+ SD+TV
Sbjct: 151 KFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTV 210
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
++WDV + ++ + H + ++ P G Y+ + DGT+ + DL GR + L GHT
Sbjct: 211 KVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHT 270
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLW 616
V+T+++S G L ASG AD V LW
Sbjct: 271 GPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 298 (110.0 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 64/221 (28%), Positives = 111/221 (50%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
R+Y Y GH V S FSP G+ + S+S D T+RLW +K H PV V F
Sbjct: 52 RAYR-YVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDF 110
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+ G + A++S D++ ++WSM R + L + H V C ++ + I + S DKT+++
Sbjct: 111 SADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 532 WDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSC 591
WD ++ +CV F + +P G +AS D T+ +WD+ + + H+
Sbjct: 171 WDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG 230
Query: 592 VWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
V +++ G+ L + S+D T+K+ D+ + + +G
Sbjct: 231 VNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTG 271
Score = 254 (94.5 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 71/253 (28%), Positives = 118/253 (46%)
Query: 340 PSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQ-----------QAV 388
P Y ++ + + S G+L+A D ++++W K G+ ++V
Sbjct: 49 PHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSV 108
Query: 389 SSGLQGENDTTPREDI---IGPNGRKRS-YTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
G+ T ED + R+R Y+LY+ H+ V A FSP G I+S S D T
Sbjct: 109 DFSADGQFLATASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 445 IRLWSTKLNANLVCYKGHNYPVWD---VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIM 501
I++W T N C + V V FNP G AS+ D+T ++W + + L+
Sbjct: 168 IKIWDT---TNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHY 224
Query: 502 AGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRY 561
H V+C+ +H + NY+ T SSD T+++ D+ G + GH + +++ S G
Sbjct: 225 QVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGEL 284
Query: 562 MASGDEDGTIMMW 574
ASG D +++W
Sbjct: 285 FASGGADTQVLLW 297
Score = 153 (58.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 32/120 (26%), Positives = 58/120 (48%)
Query: 499 RIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPD 558
R GH + + + N +AT S D + LW+ ++GH+ ++ S+ SP
Sbjct: 12 RYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPH 71
Query: 559 GRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
G +AS D T+ +W + HT+ V ++ +S +G LA+ S D ++K+W +
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Score = 146 (56.5 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 49/193 (25%), Positives = 81/193 (41%)
Query: 360 SQDGSLVAGGFSDSSLKVWDMAK------LGQ-----QAVSSGLQGENDTTPREDI---I 405
S DG +A D S+KVW M + L + + G + ED I
Sbjct: 111 SADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 406 GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
K+ + G F+P G I S+ +D T+++W ++N L Y+ H+
Sbjct: 171 WDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG 230
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
V + F+P G+Y ++S D T +I + + + + GH V V + A+G +
Sbjct: 231 VNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGA 290
Query: 526 DKTVRLWDVSSGE 538
D V LW + E
Sbjct: 291 DTQVLLWRTNFDE 303
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 294 (108.6 bits), Expect = 3.0e-25, Sum P(2) = 3.0e-25
Identities = 65/203 (32%), Positives = 103/203 (50%)
Query: 400 PREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
P+E I P Y L GH PV F P+ ++S+S D TI++W +
Sbjct: 91 PKEWIPRP---PEKYAL-SGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTL 146
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
KGH V D+ F+ G AS S D T ++W + +R M GH +V V N ++
Sbjct: 147 KGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
I + S DKT+++W+V++G CV+ F GHR + + + DG +AS D T+ +W +A+
Sbjct: 207 IVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATK 266
Query: 580 RCVTPLMGHTSCVWTLAYSCEGS 602
C L H V ++++ E +
Sbjct: 267 ECKAELREHEHVVECISWAPESA 289
Score = 280 (103.6 bits), Expect = 7.3e-23, Sum P(2) = 7.3e-23
Identities = 62/191 (32%), Positives = 98/191 (51%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH PV V F+P S+S D T ++W + R + GH V + + +
Sbjct: 106 GHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLL 165
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+ S+D T++LWD EC+R GH + S+A+ P+G ++ S D T+ MW++A+G
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGY 225
Query: 581 CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLK 640
CV GH V + + +G+LLAS S D TV++W V +TK K E + + + +
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVV--ATKECKAELREHEHVVECIS 283
Query: 641 TLPTKSTPVYS 651
P + P S
Sbjct: 284 WAPESAHPTIS 294
Score = 205 (77.2 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 58/209 (27%), Positives = 97/209 (46%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH V S + P GD I+S+S D T+++W + + GH V V+ N G
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLL 249
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
AS S+D+T R+W + + + H V+C+ W A S+ T+ + + E
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISW-------APESAHPTIS--EATGSE 300
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS 598
+S G ++ SG D TI MWD+++G C+ L+GH + V + +
Sbjct: 301 ------NKKS-------GKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFH 347
Query: 599 CEGSLLASGSADCTVKLWDVTTSTKVLKT 627
G + S + D T+++WD + +KT
Sbjct: 348 PGGRFVVSCADDKTLRIWDYKNK-RCMKT 375
Score = 201 (75.8 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 66/278 (23%), Positives = 119/278 (42%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNG-----RKR 412
S Q G L+A +D ++K+WD G + + + + G + I+ PNG R
Sbjct: 157 SFDQTGKLLASCSADMTIKLWDFQ--GFECIRT-MHGHDHNVSSVAIM-PNGDHIVSASR 212
Query: 413 SYTL-------------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
T+ + GH V + G + S S D T+R+W
Sbjct: 213 DKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAEL 272
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
+ H + V + + P+ S+H + + + +G +
Sbjct: 273 REHEHVVECISWAPE------SAHPTISEATGSENKK-----SGKPGP-----------F 310
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
+ +GS DKT+++WD+S+G C+ +GH + + + P GR++ S +D T+ +WD +
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNK 370
Query: 580 RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
RC+ L H V +L + + +GS D TVK+W+
Sbjct: 371 RCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 192 (72.6 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 43/153 (28%), Positives = 77/153 (50%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V SF G + S SAD TI+LW + + GH++ V V P G +
Sbjct: 147 KGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
S+S D+T ++W + ++ GH V VR + + +A+ S+D+TVR+W V++
Sbjct: 207 IVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATK 266
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT 570
EC H ++ ++ +P+ + + G+
Sbjct: 267 ECKAELREHEHVVECISWAPESAHPTISEATGS 299
Score = 188 (71.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 37/120 (30%), Positives = 62/120 (51%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
++GH S V V +H + + + S D T+++WD +G+ R GH + ++ G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK 163
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+AS D TI +WD C+ + GH V ++A G + S S D T+K+W+V T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVAT 223
Score = 187 (70.9 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 51/188 (27%), Positives = 88/188 (46%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A + + L+ + I
Sbjct: 229 TFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVAT---KECKAELREHEHVV---ECI 282
Query: 406 GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
T+ + +G S P G F+LS S D TI++W L+ GH+
Sbjct: 283 SWAPESAHPTISEA-TGSENKKSGKP-GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNW 340
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
V V F+P G + S + D+T RIW + ++ ++ H V + +H Y+ TGS
Sbjct: 341 VRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSV 400
Query: 526 DKTVRLWD 533
D+TV++W+
Sbjct: 401 DQTVKVWE 408
Score = 44 (20.5 bits), Expect = 3.0e-25, Sum P(2) = 3.0e-25
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 2 DELQVVEFVATYLKKKGFSEAENALQAEIQ 31
DEL +A YL+ G+ EA + + E +
Sbjct: 9 DELN--RAIADYLRSNGYEEAYSTFKKEAE 36
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 295 (108.9 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 74/242 (30%), Positives = 111/242 (45%)
Query: 383 LGQQAVSSGLQGENDTTPREDI-IGP---NGRKRSYTLYQGHSGPVYSASFSPLGDFILS 438
LG G G TP + GP + + L GH G VY F P G + S
Sbjct: 26 LGAAGAGPGA-GPQQATPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLAS 84
Query: 439 SSADTTIRLWSTKLNA-NLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQP 497
+ D I LW+ + N KGH+ V ++ +N G S+S D+T +W + +
Sbjct: 85 AGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGER 144
Query: 498 LRIMAGHLSDVD-CVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMS 556
++ + GH S V+ C + TGS D TV+LWD+ V+ F + +L++ +
Sbjct: 145 VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTF-QNTYQVLAVTFN 203
Query: 557 PDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
+ SG D I +WDL + + GH V L+ S EGS L S + D TV++W
Sbjct: 204 DTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Query: 617 DV 618
DV
Sbjct: 264 DV 265
Score = 235 (87.8 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 60/224 (26%), Positives = 107/224 (47%)
Query: 413 SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPV---WDV 469
+Y +GHSG V ++ G + S+S D T+ +W ++ + KGH V +
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 161
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
+ PQ + S D T ++W + + ++ + V V ++ + I +G D +
Sbjct: 162 RRGPQ--LVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDI 218
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA----SGRCVTPL 585
++WD+ + GH + L++S +G Y+ S D T+ +WD+ RCV
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIF 278
Query: 586 MGHT----SCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
G+ + ++S +GS +A+GSAD V +WD TTS +VL
Sbjct: 279 QGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRVL 321
Score = 213 (80.0 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 55/202 (27%), Positives = 94/202 (46%)
Query: 418 QGHSGPVYSASFSPLG-DFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
+GH+ V S + G + + S D T++LW + A + ++ + Y V V FN
Sbjct: 149 KGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSD 207
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS- 535
S D ++W + + + M GH V + +Y+ + + D TVR+WDV
Sbjct: 208 QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 267
Query: 536 ---SGECVRIFIGH----RSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
CV+IF G+ +L + SPDG +A+G D + +WD S R + L GH
Sbjct: 268 FAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGH 327
Query: 589 TSCVWTLAYSCEGSLLASGSAD 610
+ +A+ + ++ S S+D
Sbjct: 328 AGSINEVAFHPDEPIILSASSD 349
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 53/204 (25%), Positives = 94/204 (46%)
Query: 381 AKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSS 440
A+ G Q V +G ++ T DI +K + +Q ++ V + +F+ D I+S
Sbjct: 161 ARRGPQLVCTG--SDDGTVKLWDI----RKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGG 213
Query: 441 ADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQP--- 497
D I++W + N +GH V + + +G Y S++ D T R+W + P
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 273
Query: 498 -LRIMAG--HLSDVDCVR--WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILS 552
++I G H + + +R W + + IA GS+D+ V +WD +S + GH I
Sbjct: 274 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINE 333
Query: 553 LAMSPDGRYMASGDEDGTIMMWDL 576
+A PD + S D + M ++
Sbjct: 334 VAFHPDEPIILSASSDKRLYMGEI 357
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 29/87 (33%), Positives = 44/87 (50%)
Query: 540 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRC--VTPLMGHTSCVWTLAY 597
+ + GH + P+G +AS D I++W++ G C L GH+ V L Y
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 598 SCEGSLLASGSADCTVKLWDVTTSTKV 624
+ +GS+L S S D TV +WD T +V
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERV 145
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 294 (108.6 bits), Expect = 4.0e-25, P = 4.0e-25
Identities = 70/231 (30%), Positives = 109/231 (47%)
Query: 394 GENDTTPREDI-IGP---NGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWS 449
G+ TP + GP + + L GH G VY F P G + S+ D I LW+
Sbjct: 35 GQQQATPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWN 94
Query: 450 TKLNA-NLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDV 508
+ N KGH+ V ++ +N G S+S D+T +W + + ++ + GH S V
Sbjct: 95 VYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFV 154
Query: 509 D-CVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDE 567
+ C + TGS D TV+LWD+ ++ F + +L++ + + SG
Sbjct: 155 NSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGI 213
Query: 568 DGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
D I +WDL + + GH V L+ S EGS L S + D TV++WDV
Sbjct: 214 DNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 235 (87.8 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 59/224 (26%), Positives = 107/224 (47%)
Query: 413 SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPV---WDV 469
+Y +GHSG V ++ G + S+S D T+ +W ++ + KGH V +
Sbjct: 101 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 160
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
+ PQ + S D T ++W + + ++ + V V ++ + I +G D +
Sbjct: 161 RRGPQ--LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDI 217
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA----SGRCVTPL 585
++WD+ + GH + L++S +G Y+ S D T+ +WD+ RCV
Sbjct: 218 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIF 277
Query: 586 MGHT----SCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
G+ + ++S +GS +A+GSAD V +WD TTS ++L
Sbjct: 278 QGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRIL 320
Score = 214 (80.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 55/202 (27%), Positives = 94/202 (46%)
Query: 418 QGHSGPVYSASFSPLG-DFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
+GH+ V S + G + + S D T++LW + A + ++ + Y V V FN
Sbjct: 148 KGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSD 206
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS- 535
S D ++W + + + M GH V + +Y+ + + D TVR+WDV
Sbjct: 207 QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 266
Query: 536 ---SGECVRIFIGH----RSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
CV+IF G+ +L + SPDG +A+G D + +WD S R + L GH
Sbjct: 267 FAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGH 326
Query: 589 TSCVWTLAYSCEGSLLASGSAD 610
+ +A+ + ++ S S+D
Sbjct: 327 AGSINEVAFHPDEPIIISASSD 348
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 53/204 (25%), Positives = 94/204 (46%)
Query: 381 AKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSS 440
A+ G Q V +G ++ T DI +K + +Q ++ V + +F+ D I+S
Sbjct: 160 ARRGPQLVCTG--SDDGTVKLWDI----RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGG 212
Query: 441 ADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQP--- 497
D I++W + N +GH V + + +G Y S++ D T R+W + P
Sbjct: 213 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 272
Query: 498 -LRIMAG--HLSDVDCVR--WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILS 552
++I G H + + +R W + + IA GS+D+ V +WD +S + GH I
Sbjct: 273 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINE 332
Query: 553 LAMSPDGRYMASGDEDGTIMMWDL 576
+A PD + S D + M ++
Sbjct: 333 VAFHPDEPIIISASSDKRLYMGEI 356
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 29/87 (33%), Positives = 44/87 (50%)
Query: 540 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRC--VTPLMGHTSCVWTLAY 597
+ + GH + P+G +AS D I++W++ G C L GH+ V L Y
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 117
Query: 598 SCEGSLLASGSADCTVKLWDVTTSTKV 624
+ +GS+L S S D TV +WD T +V
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERV 144
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 294 (108.6 bits), Expect = 4.0e-25, P = 4.0e-25
Identities = 77/229 (33%), Positives = 114/229 (49%)
Query: 418 QGHSGPVYSASFSPLG-DFILSSSADTTIRLWS-TKLNANL-VCYK---GHNYPVWDVQF 471
+GHSG V S S +P D +LS S D +I LW+ + + N V + GH++ V D
Sbjct: 12 EGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCAL 71
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+ HY S+S D+T R+W +++ + GH SDV V + + +GS DKT+++
Sbjct: 72 SFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKI 131
Query: 532 WDVSSGECVRIFI--GHRSMILSLAMSP--DGRYMASGDEDGTIMMWDLASGRCVTPLMG 587
W++ G C GH + + SP D S D + +WDL + T G
Sbjct: 132 WNII-GNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYG 190
Query: 588 HTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRL 636
HT V + S +GSL ASG D T+ LWD+ ST + E K+ N L
Sbjct: 191 HTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKANINAL 239
Score = 228 (85.3 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 63/198 (31%), Positives = 99/198 (50%)
Query: 460 KGHNYPVWDVQFNPQG-HYFASSSHDRTARIWSM--DRIQ---PLRIMAGHLSDV-DCVR 512
+GH+ V + P+ S S D++ +W++ D + R + GH V DC
Sbjct: 12 EGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCAL 71
Query: 513 WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIM 572
+ +Y + S DKT+RLWD+ GEC F+GH S +LS+++SPD R + SG D TI
Sbjct: 72 -SFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIK 130
Query: 573 MWDLASGRCVTPLM--GHTSCVWTLAYSCEGSLLASGSA--DCTVKLWDVTTSTKVLKTE 628
+W++ G C + GH+ V + +S L SA D VK+WD+ T + L+T
Sbjct: 131 IWNII-GNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFS--LRTS 187
Query: 629 EKSGTNRLRSLKTLPTKS 646
T + ++ P S
Sbjct: 188 HYGHTGYVSAVTISPDGS 205
Score = 190 (71.9 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 61/217 (28%), Positives = 102/217 (47%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANL-VCYKGHNYPVWDVQF--NP 473
+ GH+ V S S SP ++S S D TI++W+ N + GH+ V V+F NP
Sbjct: 101 FVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNP 160
Query: 474 QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
F S+ D+ ++W ++ GH V V + + A+G D T+ LWD
Sbjct: 161 DNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWD 220
Query: 534 VSSGECVRIF-IGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPL------M 586
++ E ++ + ++ I +L SP+ RY +I ++DL + V L +
Sbjct: 221 LN--ESTHLYSLEAKANINALVFSPN-RYWLCAATGSSIRIFDLETQEKVDELTVDFVGV 277
Query: 587 GHTS----CVWTLAYSCEGSLLASGSADCTVKLWDVT 619
G S C+ +L +S +G L SG D +++W VT
Sbjct: 278 GKKSSEPECI-SLTWSPDGQTLFSGWTDNLIRVWQVT 313
Score = 47 (21.6 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 22/84 (26%), Positives = 39/84 (46%)
Query: 300 TVSTAPRVKPDLALPVMPTEVEQSILEDL-RNRVHLSSAALPSVSFYTFINTHNGLNCAS 358
++STAP PD+ L + + IL +L R+ V+ A F++ +CA
Sbjct: 20 SLSTAPE-NPDILLS--GSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVS-----DCA- 70
Query: 359 ISQDGSLVAGGFSDSSLKVWDMAK 382
+S D D ++++WD+ K
Sbjct: 71 LSFDSHYALSASWDKTIRLWDLEK 94
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 320 (117.7 bits), Expect = 4.9e-25, Sum P(2) = 4.9e-25
Identities = 89/289 (30%), Positives = 142/289 (49%)
Query: 359 ISQDGSLVAG---GFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPRE-DIIGPNGRKRSY 414
IS DG+ V G G +D L + D ++ G + G D T R ++ + +
Sbjct: 349 ISTDGTQVFGVLEGHTDIVLTL-DSSEDGVWLAT----GAKDNTVRLWNLNIEDNVYKCI 403
Query: 415 TLYQGHSGPVYSASFSPLG-----DFILSSSADTTIRLWS--TKLN----ANLVCY--KG 461
++ GH+ V + + PL F+ SSS D T++ ++ ++LN +N + K
Sbjct: 404 HVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKA 463
Query: 462 HNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIA 521
H+ V +Q + G AS+S D+T ++W + + ++ GH V ++ +A
Sbjct: 464 HDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLA 523
Query: 522 TGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRC 581
+GS D+T+R+W+V + +CV+ GH IL L G + S DG + +W L+SG C
Sbjct: 524 SGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGEC 583
Query: 582 VTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW-DVTTSTKVLKTEE 629
V L H VW LA +GSLL SG AD V +W DVT + EE
Sbjct: 584 VATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWKDVTEEYIAKQAEE 632
Score = 182 (69.1 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 48/234 (20%), Positives = 96/234 (41%)
Query: 398 TTPREDIIGPNGR--KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNAN 455
T + IIG +R +++ + V + + + ++++ + ++
Sbjct: 36 TALTDRIIGTRSETGERLFSIKKDEDDYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRR 95
Query: 456 LVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVD--CVRW 513
+ K H PV + +P A+ + ++W + GH + C
Sbjct: 96 IKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGK 155
Query: 514 HINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMM 573
H N +A+G+ D VRLWD++S + +F GH S+I L P G ++ SG D T+ +
Sbjct: 156 HQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQV 215
Query: 574 WDLASGRCVT--PLMGHTSCV-WTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
W++ V P+ + W E L +G + + WD + +++
Sbjct: 216 WNIKKRSAVRTIPVFHSVEAIGWVNGQPEEKILYTAGEGNL-ILAWDWKSGSRL 268
Score = 169 (64.5 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 43/148 (29%), Positives = 74/148 (50%)
Query: 498 LRIMAGHLSDVDCVRWH-INCN----YIATGSSDKTVRLWDVSS--------GECVRIFI 544
+ + GH + V V ++ N ++A+ S D+T++ +++ S V
Sbjct: 403 IHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIK 462
Query: 545 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLL 604
H + ++ +S DGR +AS +D TI +WD ++G V L GH VW +++ L
Sbjct: 463 AHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQL 522
Query: 605 ASGSADCTVKLWDVTTSTKVLKTEEKSG 632
ASGS D T+++W+V T V E +G
Sbjct: 523 ASGSGDRTIRIWNVDTQQCVQTLEGHTG 550
Score = 157 (60.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 39/182 (21%), Positives = 82/182 (45%)
Query: 407 PNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPV 466
P+GR+ + H PV + + P + + A+ +++W ++GH +
Sbjct: 91 PSGRR--IKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVI 148
Query: 467 WDVQFNPQGHYF--ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGS 524
+ F + + AS + D R+W ++ + + + GH S + + + +++ +GS
Sbjct: 149 SALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGS 208
Query: 525 SDKTVRLWDVSSGECVR-IFIGHRSMILSLAMS-PDGRYMASGDEDGTIMMWDLASGRCV 582
DKTV++W++ VR I + H + P+ + + + E I+ WD SG +
Sbjct: 209 RDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQPEEKILYTAGEGNLILAWDWKSGSRL 268
Query: 583 TP 584
P
Sbjct: 269 DP 270
Score = 140 (54.3 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 30/122 (24%), Positives = 60/122 (49%)
Query: 527 KTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLM 586
+ + ++++ SG ++ H + ++++ + P +A+G +G + +WD+A
Sbjct: 83 RLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFR 142
Query: 587 GHTSCVWTLAYSCEGS--LLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPT 644
GH + L + + +LASG+ D V+LWD+ +S + E S +R L PT
Sbjct: 143 GHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSV--IRGLTFEPT 200
Query: 645 KS 646
S
Sbjct: 201 GS 202
Score = 122 (48.0 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 54/221 (24%), Positives = 96/221 (43%)
Query: 254 GENKEAEIDENKKRPVEGGKQGASIKKLKKDKAINATAKTSRLEANTVSTAPRV------ 307
GE K E++++ + P+ G A ++ I TA T R+ T R+
Sbjct: 5 GEKKRFELEKSIE-PIYTGGPVA----FDSNEKILVTALTDRIIGTRSETGERLFSIKKD 59
Query: 308 KPDLALPVMPTEVEQSILEDLRNRVHLSSAALPSVSFYTFINTHNG-LNCASISQDGSLV 366
+ D + T + ++ R+R+ L+ +PS + H + +I +L+
Sbjct: 60 EDDYVTALAITSDSKKLIAAFRSRL-LTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLL 118
Query: 367 AGGFSDSSLKVWDMAKL-------GQQAVSSGLQ-GENDTT-----PREDI---IGPNGR 410
A G ++ +KVWD+A G V S L G++ T +D +
Sbjct: 119 ATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNS 178
Query: 411 KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTK 451
RS +++GHS + +F P G F+LS S D T+++W+ K
Sbjct: 179 SRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIK 219
Score = 121 (47.7 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 33/120 (27%), Positives = 62/120 (51%)
Query: 508 VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDE 567
+DC W I +++A S+ + + + + + GH ++L+L S DG ++A+G +
Sbjct: 327 IDCA-W-IGDDHLAVCSNTEFIDVISTDGTQVFGVLEGHTDIVLTLDSSEDGVWLATGAK 384
Query: 568 DGTIMMWDLASG----RCVTPLMGHTSCVWTLAYS---CEG--SLLASGSADCTVKLWDV 618
D T+ +W+L +C+ GHT+ V +A G + LAS S D T+K +++
Sbjct: 385 DNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNL 444
Score = 117 (46.2 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 33/128 (25%), Positives = 63/128 (49%)
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
+ A S+ + S D Q ++ GH V + + ++ATG+ D TVRLW+++
Sbjct: 336 HLAVCSNTEFIDVISTDGTQVFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNI 395
Query: 537 GE----CVRIFIGHRSMILSLAMSP---DG--RYMASGDEDGTIMMWDLASGRCVTPLMG 587
+ C+ +F GH + + ++A+ P +G ++AS +D T+ ++L S +
Sbjct: 396 EDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSN 455
Query: 588 HTSCVWTL 595
VWT+
Sbjct: 456 RA--VWTI 461
Score = 43 (20.2 bits), Expect = 4.9e-25, Sum P(2) = 4.9e-25
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 363 GSLVAGGFSDSSLKVWDMAK 382
GS + G D +++VW++ K
Sbjct: 201 GSFLLSGSRDKTVQVWNIKK 220
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 293 (108.2 bits), Expect = 5.1e-25, P = 5.1e-25
Identities = 65/205 (31%), Positives = 100/205 (48%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA-NLVCYKGHNYPVWDVQFNPQ 474
L GH G VY F P G + S+ D I LW+ + N KGH+ V ++ +N
Sbjct: 62 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVD-CVRWHINCNYIATGSSDKTVRLWD 533
G S+S D+T +W + + ++ + GH S V+ C + TGS D TV+LWD
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 534 VSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVW 593
+ ++ F + +L++ + + SG D I +WDL + + GH V
Sbjct: 182 IRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 240
Query: 594 TLAYSCEGSLLASGSADCTVKLWDV 618
L+ S EGS L S + D TV++WDV
Sbjct: 241 GLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 235 (87.8 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 59/224 (26%), Positives = 107/224 (47%)
Query: 413 SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPV---WDV 469
+Y +GHSG V ++ G + S+S D T+ +W ++ + KGH V +
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 161
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
+ PQ + S D T ++W + + ++ + V V ++ + I +G D +
Sbjct: 162 RRGPQ--LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDI 218
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA----SGRCVTPL 585
++WD+ + GH + L++S +G Y+ S D T+ +WD+ RCV
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIF 278
Query: 586 MGHT----SCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
G+ + ++S +GS +A+GSAD V +WD TTS ++L
Sbjct: 279 QGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRIL 321
Score = 217 (81.4 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 56/202 (27%), Positives = 94/202 (46%)
Query: 418 QGHSGPVYSASFSPLG-DFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
+GH+ V S + G + + S D T++LW + A + ++ + Y V V FN
Sbjct: 149 KGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSD 207
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS- 535
S D ++W + + + M GH V + +Y+ + + D TVR+WDV
Sbjct: 208 QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 267
Query: 536 ---SGECVRIFIGH----RSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
CVRIF G+ +L + SPDG +A+G D + +WD S R + L GH
Sbjct: 268 FAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGH 327
Query: 589 TSCVWTLAYSCEGSLLASGSAD 610
+ +A+ + ++ S S+D
Sbjct: 328 AGSINEVAFHPDEPIILSASSD 349
Score = 198 (74.8 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 43/125 (34%), Positives = 69/125 (55%)
Query: 497 PLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGEC--VRIFIGHRSMILSLA 554
P+ +++GH +V C ++H N + +A+ D+ + LW+V G+C GH ++ L
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELH 117
Query: 555 MSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEG-SLLASGSADCTV 613
+ DG + S D T+ +WD +G V L GHTS V + + G L+ +GS D TV
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 177
Query: 614 KLWDV 618
KLWD+
Sbjct: 178 KLWDI 182
Score = 182 (69.1 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 54/204 (26%), Positives = 94/204 (46%)
Query: 381 AKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSS 440
A+ G Q V +G ++ T DI +K + +Q ++ V + +F+ D I+S
Sbjct: 161 ARRGPQLVCTG--SDDGTVKLWDI----RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGG 213
Query: 441 ADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQP--- 497
D I++W + N +GH V + + +G Y S++ D T R+W + P
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 273
Query: 498 -LRIMAG--HLSDVDCVR--WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILS 552
+RI G H + + +R W + + IA GS+D+ V +WD +S + GH I
Sbjct: 274 CVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINE 333
Query: 553 LAMSPDGRYMASGDEDGTIMMWDL 576
+A PD + S D + M ++
Sbjct: 334 VAFHPDEPIILSASSDKRLYMGEI 357
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 29/87 (33%), Positives = 44/87 (50%)
Query: 540 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRC--VTPLMGHTSCVWTLAY 597
+ + GH + P+G +AS D I++W++ G C L GH+ V L Y
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 598 SCEGSLLASGSADCTVKLWDVTTSTKV 624
+ +GS+L S S D TV +WD T +V
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERV 145
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 293 (108.2 bits), Expect = 5.1e-25, P = 5.1e-25
Identities = 65/205 (31%), Positives = 100/205 (48%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA-NLVCYKGHNYPVWDVQFNPQ 474
L GH G VY F P G + S+ D I LW+ + N KGH+ V ++ +N
Sbjct: 62 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVD-CVRWHINCNYIATGSSDKTVRLWD 533
G S+S D+T +W + + ++ + GH S V+ C + TGS D TV+LWD
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 534 VSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVW 593
+ ++ F + +L++ + + SG D I +WDL + + GH V
Sbjct: 182 IRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 240
Query: 594 TLAYSCEGSLLASGSADCTVKLWDV 618
L+ S EGS L S + D TV++WDV
Sbjct: 241 GLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 235 (87.8 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 59/224 (26%), Positives = 107/224 (47%)
Query: 413 SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPV---WDV 469
+Y +GHSG V ++ G + S+S D T+ +W ++ + KGH V +
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 161
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
+ PQ + S D T ++W + + ++ + V V ++ + I +G D +
Sbjct: 162 RRGPQ--LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDI 218
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA----SGRCVTPL 585
++WD+ + GH + L++S +G Y+ S D T+ +WD+ RCV
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIF 278
Query: 586 MGHT----SCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
G+ + ++S +GS +A+GSAD V +WD TTS ++L
Sbjct: 279 QGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRIL 321
Score = 214 (80.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 55/202 (27%), Positives = 94/202 (46%)
Query: 418 QGHSGPVYSASFSPLG-DFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
+GH+ V S + G + + S D T++LW + A + ++ + Y V V FN
Sbjct: 149 KGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSD 207
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS- 535
S D ++W + + + M GH V + +Y+ + + D TVR+WDV
Sbjct: 208 QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 267
Query: 536 ---SGECVRIFIGH----RSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
CV+IF G+ +L + SPDG +A+G D + +WD S R + L GH
Sbjct: 268 FAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGH 327
Query: 589 TSCVWTLAYSCEGSLLASGSAD 610
+ +A+ + ++ S S+D
Sbjct: 328 AGSINEVAFHPDEPIILSASSD 349
Score = 198 (74.8 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 43/125 (34%), Positives = 69/125 (55%)
Query: 497 PLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGEC--VRIFIGHRSMILSLA 554
P+ +++GH +V C ++H N + +A+ D+ + LW+V G+C GH ++ L
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELH 117
Query: 555 MSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEG-SLLASGSADCTV 613
+ DG + S D T+ +WD +G V L GHTS V + + G L+ +GS D TV
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 177
Query: 614 KLWDV 618
KLWD+
Sbjct: 178 KLWDI 182
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 53/204 (25%), Positives = 94/204 (46%)
Query: 381 AKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSS 440
A+ G Q V +G ++ T DI +K + +Q ++ V + +F+ D I+S
Sbjct: 161 ARRGPQLVCTG--SDDGTVKLWDI----RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGG 213
Query: 441 ADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQP--- 497
D I++W + N +GH V + + +G Y S++ D T R+W + P
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 273
Query: 498 -LRIMAG--HLSDVDCVR--WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILS 552
++I G H + + +R W + + IA GS+D+ V +WD +S + GH I
Sbjct: 274 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINE 333
Query: 553 LAMSPDGRYMASGDEDGTIMMWDL 576
+A PD + S D + M ++
Sbjct: 334 VAFHPDEPIILSASSDKRLYMGEI 357
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 29/87 (33%), Positives = 44/87 (50%)
Query: 540 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRC--VTPLMGHTSCVWTLAY 597
+ + GH + P+G +AS D I++W++ G C L GH+ V L Y
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 598 SCEGSLLASGSADCTVKLWDVTTSTKV 624
+ +GS+L S S D TV +WD T +V
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERV 145
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 293 (108.2 bits), Expect = 5.1e-25, P = 5.1e-25
Identities = 65/205 (31%), Positives = 100/205 (48%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA-NLVCYKGHNYPVWDVQFNPQ 474
L GH G VY F P G + S+ D I LW+ + N KGH+ V ++ +N
Sbjct: 62 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVD-CVRWHINCNYIATGSSDKTVRLWD 533
G S+S D+T +W + + ++ + GH S V+ C + TGS D TV+LWD
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 534 VSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVW 593
+ ++ F + +L++ + + SG D I +WDL + + GH V
Sbjct: 182 IRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 240
Query: 594 TLAYSCEGSLLASGSADCTVKLWDV 618
L+ S EGS L S + D TV++WDV
Sbjct: 241 GLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 235 (87.8 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 59/224 (26%), Positives = 107/224 (47%)
Query: 413 SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPV---WDV 469
+Y +GHSG V ++ G + S+S D T+ +W ++ + KGH V +
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 161
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
+ PQ + S D T ++W + + ++ + V V ++ + I +G D +
Sbjct: 162 RRGPQ--LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDI 218
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA----SGRCVTPL 585
++WD+ + GH + L++S +G Y+ S D T+ +WD+ RCV
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIF 278
Query: 586 MGHT----SCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
G+ + ++S +GS +A+GSAD V +WD TTS ++L
Sbjct: 279 QGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRIL 321
Score = 214 (80.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 55/202 (27%), Positives = 94/202 (46%)
Query: 418 QGHSGPVYSASFSPLG-DFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
+GH+ V S + G + + S D T++LW + A + ++ + Y V V FN
Sbjct: 149 KGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSD 207
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS- 535
S D ++W + + + M GH V + +Y+ + + D TVR+WDV
Sbjct: 208 QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 267
Query: 536 ---SGECVRIFIGH----RSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
CV+IF G+ +L + SPDG +A+G D + +WD S R + L GH
Sbjct: 268 FAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGH 327
Query: 589 TSCVWTLAYSCEGSLLASGSAD 610
+ +A+ + ++ S S+D
Sbjct: 328 AGSINEVAFHPDEPIILSASSD 349
Score = 198 (74.8 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 43/125 (34%), Positives = 69/125 (55%)
Query: 497 PLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGEC--VRIFIGHRSMILSLA 554
P+ +++GH +V C ++H N + +A+ D+ + LW+V G+C GH ++ L
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELH 117
Query: 555 MSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEG-SLLASGSADCTV 613
+ DG + S D T+ +WD +G V L GHTS V + + G L+ +GS D TV
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 177
Query: 614 KLWDV 618
KLWD+
Sbjct: 178 KLWDI 182
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 53/204 (25%), Positives = 94/204 (46%)
Query: 381 AKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSS 440
A+ G Q V +G ++ T DI +K + +Q ++ V + +F+ D I+S
Sbjct: 161 ARRGPQLVCTG--SDDGTVKLWDI----RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGG 213
Query: 441 ADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQP--- 497
D I++W + N +GH V + + +G Y S++ D T R+W + P
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 273
Query: 498 -LRIMAG--HLSDVDCVR--WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILS 552
++I G H + + +R W + + IA GS+D+ V +WD +S + GH I
Sbjct: 274 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINE 333
Query: 553 LAMSPDGRYMASGDEDGTIMMWDL 576
+A PD + S D + M ++
Sbjct: 334 VAFHPDEPIILSASSDKRLYMGEI 357
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 29/87 (33%), Positives = 44/87 (50%)
Query: 540 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRC--VTPLMGHTSCVWTLAY 597
+ + GH + P+G +AS D I++W++ G C L GH+ V L Y
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 598 SCEGSLLASGSADCTVKLWDVTTSTKV 624
+ +GS+L S S D TV +WD T +V
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERV 145
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 309 (113.8 bits), Expect = 6.4e-25, P = 6.4e-25
Identities = 76/229 (33%), Positives = 108/229 (47%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA-NLVCYKGHNYPVWDVQFNPQGH 476
+GHS V S +FSP G ++ S S DTT+R W + C KGH + V + ++P G
Sbjct: 113 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC-KGHRHWVLSISWSPDGK 171
Query: 477 YFASSSHDRTARIWSMDR-IQPLRIMAGHLSDVDCVRW---HIN--CNYIATGSSDKTVR 530
AS + +W Q R + GH + + W H+N C Y+A+ S D +VR
Sbjct: 172 KLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVR 231
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
+WD ++G C RI GH + L DG + S +D TI +W G L GH
Sbjct: 232 VWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGH 290
Query: 591 CVWTLAYSCEGSLLASG--SADCTVKLWDVTTSTKVLKTEEKSGTNRLR 637
V T+A S + +L A+ TV D+ S K LK S N +R
Sbjct: 291 WVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVR 339
Score = 223 (83.6 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 67/267 (25%), Positives = 128/267 (47%)
Query: 366 VAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPR---EDIIGPNGRKRSYTLYQGHSG 422
VA D S++VWD + + +G ++ T R + ++ + R+ +++ H G
Sbjct: 221 VASSSKDGSVRVWDTTAGRCERILTG-HTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG 279
Query: 423 PVYSASFSPLGDFI--LSSSADTTIRLWS---TKLNANLVCYKGHNYPVWD---VQFN-- 472
V + G ++ ++ S D +R + + N +G + + ++N
Sbjct: 280 -VLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLV 338
Query: 473 -PQG-HYFASSSHDRTARIWS-MDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
QG S S D T +WS + +PL M GH + ++ V + + +A+ S DK++
Sbjct: 339 RGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSI 398
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
+LWD +G+ + GH + + +A S D R + SG D T+ +WD+ + + T L GH
Sbjct: 399 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHA 458
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLW 616
V+ + +S +G +ASG D +++W
Sbjct: 459 DEVYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 209 (78.6 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 60/212 (28%), Positives = 105/212 (49%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFIL-SSSADTTIRLWSTKLNANLVC--YKGHNYPVWD 468
R + GH+ V + GD +L S+S D TI++W + + ++C +GH + V
Sbjct: 239 RCERILTGHTQSVTCLRWG--GDGLLYSASQDRTIKVW--RAHDGVLCRTLQGHGHWVNT 294
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSD-VDCVRWHINCNYIATGSSDK 527
+ + + A + + D L+ + S + VR + +GS D
Sbjct: 295 MALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQ-GPERLVSGSDDF 353
Query: 528 TVRLWDVSSGEC-VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLM 586
T+ LW + + + GH+++I + SPD R +AS D +I +WD +G+ + L
Sbjct: 354 TLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLR 413
Query: 587 GHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
GH + V+ +A+S + LL SGS+D T+K+WDV
Sbjct: 414 GHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV 445
Score = 203 (76.5 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 67/241 (27%), Positives = 101/241 (41%)
Query: 394 GENDTTPRE-DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
G DTT R D+ + + +GH V S S+SP G + S + I LW
Sbjct: 134 GSGDTTVRFWDL----STETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPST 189
Query: 453 NANLV-CYKGHNYPV----WD-VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLS 506
+ GH+ + W+ + NP+ Y ASSS D + R+W + RI+ GH
Sbjct: 190 GTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQ 249
Query: 507 DVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGD 566
V C+RW + + + S D+T+++W G R GH + ++A+S D
Sbjct: 250 SVTCLRWGGD-GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAF 308
Query: 567 E--DGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
E + T+ DL + L S + L L SGS D T+ LW K
Sbjct: 309 EPAEATVNAQDLQGS--LKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKP 366
Query: 625 L 625
L
Sbjct: 367 L 367
Score = 197 (74.4 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 47/125 (37%), Positives = 71/125 (56%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
+ GH V V + Y+A+GS D TVR WD+S+ GHR +LS++ SPDG+
Sbjct: 112 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGK 171
Query: 561 YMASGDEDGTIMMWDLASGRCV-TPLMGHTSCV----WT-LAYSCEGSLLASGSADCTVK 614
+ASG ++G I++WD ++G V L GH+ + W L + E +AS S D +V+
Sbjct: 172 KLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVR 231
Query: 615 LWDVT 619
+WD T
Sbjct: 232 VWDTT 236
Score = 165 (63.1 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 33/89 (37%), Positives = 51/89 (57%)
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS 598
C GH ++S+A SP G+Y+ASG D T+ WDL++ GH V ++++S
Sbjct: 108 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWS 167
Query: 599 CEGSLLASGSADCTVKLWDVTTSTKVLKT 627
+G LASG + + LWD +T T+V +T
Sbjct: 168 PDGKKLASGCKNGQILLWDPSTGTQVGRT 196
Score = 160 (61.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 53/212 (25%), Positives = 97/212 (45%)
Query: 419 GHSGPVYSASFSPLG-----DFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNP 473
GHS + S+ PL ++ SSS D ++R+W T GH V +++
Sbjct: 199 GHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGG 258
Query: 474 QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY-IATGS---SDKTV 529
G + S+S DRT ++W R + GH V+ + ++ +Y + TG+ ++ TV
Sbjct: 259 DGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMA--LSTDYALRTGAFEPAEATV 315
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRC-VTPLMGH 588
D+ ++ S +L + SG +D T+ +W A + + + GH
Sbjct: 316 NAQDLQGS--LKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGH 373
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+ + + +S + ++AS S D ++KLWD T
Sbjct: 374 QALINQVLFSPDSRIVASASFDKSIKLWDGRT 405
Score = 47 (21.6 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMA 381
+ S G +A G D++++ WD++
Sbjct: 123 AFSPTGKYLASGSGDTTVRFWDLS 146
Score = 43 (20.2 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGEN 396
S S DG +A G + + +WD + G Q V L G +
Sbjct: 165 SWSPDGKKLASGCKNGQILLWDPST-GTQ-VGRTLTGHS 201
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 312 (114.9 bits), Expect = 7.4e-25, P = 7.4e-25
Identities = 67/212 (31%), Positives = 115/212 (54%)
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
G RS + +GH V + G+ I+S S D T+++WS L GH VW
Sbjct: 290 GELRSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 348
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
Q + + S S DRT ++W+ + + + + GH S V C+ H++ + +GS D T
Sbjct: 349 SQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM--HLHEKRVVSGSRDAT 404
Query: 529 VRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
+R+WD+ +G+C+ + +GH + + + DGR + SG D + +WD + C+ L GH
Sbjct: 405 LRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGH 462
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
T+ V++L + +G + SGS D ++++WDV T
Sbjct: 463 TNRVYSLQF--DGIHVVSGSLDTSIRVWDVET 492
Score = 267 (99.0 bits), Expect = 7.5e-20, P = 7.5e-20
Identities = 72/272 (26%), Positives = 129/272 (47%)
Query: 363 GSLVAGGFSDSSLKVWDMAKLGQ--QAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGH 420
G+ + G D++LKVW A G+ + + G + R++II R+ ++
Sbjct: 313 GNRIVSGSDDNTLKVWS-AVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAE 371
Query: 421 SGPVYSASFSPLGDF---------ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
+G + ++S S D T+R+W + L GH V VQ+
Sbjct: 372 TGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 431
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+ G S ++D ++W + L + GH + V +++ + ++ +GS D ++R+
Sbjct: 432 D--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRV 487
Query: 532 WDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMG---H 588
WDV +G C+ GH+S L+ M + SG+ D T+ +WD+ +G+C+ L G H
Sbjct: 488 WDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKH 545
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
S V L ++ + + + S D TVKLWD+ T
Sbjct: 546 QSAVTCLQFN--KNFVITSSDDGTVKLWDLKT 575
Score = 261 (96.9 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 62/184 (33%), Positives = 101/184 (54%)
Query: 460 KGHN-YPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW--HIN 516
KGH+ + + +QF G+ S S D T ++WS + LR + GH V W +
Sbjct: 299 KGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQMR 352
Query: 517 CNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
N I +GS+D+T+++W+ +GEC+ GH S + + + + + SG D T+ +WD+
Sbjct: 353 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDI 410
Query: 577 ASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRL 636
+G+C+ LMGH + V + Y +G + SG+ D VK+WD T T L T + TNR+
Sbjct: 411 ETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETET-CLHTLQ-GHTNRV 466
Query: 637 RSLK 640
SL+
Sbjct: 467 YSLQ 470
Score = 209 (78.6 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 60/254 (23%), Positives = 121/254 (47%)
Query: 351 HNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTP----REDIIG 406
H G +S +D +++G +D +LKVW+ A+ G+ + + L G T E +
Sbjct: 342 HTGGVWSSQMRDNIIISGS-TDRTLKVWN-AETGE-CIHT-LYGHTSTVRCMHLHEKRVV 397
Query: 407 PNGRKRSYTLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNAN 455
R + ++ GH V + G ++S + D +++W +
Sbjct: 398 SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETC 455
Query: 456 LVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHI 515
L +GH V+ +QF+ G + S S D + R+W ++ + + GH S + +
Sbjct: 456 LHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME--L 511
Query: 516 NCNYIATGSSDKTVRLWDVSSGECVRIFIG---HRSMILSLAMSPDGRYMASGDEDGTIM 572
N + +G++D TV++WD+ +G+C++ G H+S + L + + ++ + +DGT+
Sbjct: 512 KDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVK 569
Query: 573 MWDLASGRCVTPLM 586
+WDL +G + L+
Sbjct: 570 LWDLKTGEFIRNLV 583
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 320 (117.7 bits), Expect = 8.7e-25, P = 8.7e-25
Identities = 68/206 (33%), Positives = 109/206 (52%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
++GH V S SFS + S+S D T+++W T + +GHN V V F+
Sbjct: 259 FKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSR 318
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
AS+S D T +IW R++ GH V V + + IA+GS+D+TVR+W+ ++
Sbjct: 319 LLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTT 378
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
G F H +++++ + D R +AS + G + +WD +G L GH CV +++
Sbjct: 379 GLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVS 438
Query: 597 YSCEGSLLASGSADCTVKLWDVTTST 622
+S + LLAS S D TVK+W T +
Sbjct: 439 FSPDSRLLASASDDRTVKIWHAATGS 464
Score = 299 (110.3 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 89/300 (29%), Positives = 135/300 (45%)
Query: 351 HNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSG-----------------L 392
HN + S D L+A D ++K+WD A Q + G
Sbjct: 304 HNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIA 363
Query: 393 QGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
G ND T R I +T ++ H V + SF+ + S+S +++W T+
Sbjct: 364 SGSNDRTVR--IWETTTGLLRHT-FEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRT 420
Query: 453 NANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVR 512
+ +GH+ V V F+P AS+S DRT +IW R + GH V V
Sbjct: 421 GSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVV 480
Query: 513 WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIM 572
+ + IA+ S D TV++WD ++ H + + S+ S D R +AS +D T+
Sbjct: 481 FSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVK 540
Query: 573 MWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
+WD A+G L GH V ++++S + LLAS S D TVK+W T T V T + SG
Sbjct: 541 IWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGT-VQHTFDGSG 599
Score = 296 (109.3 bits), Expect = 3.6e-22, P = 3.6e-22
Identities = 86/303 (28%), Positives = 136/303 (44%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPR----EDI-----IGPN 408
S S D L+A D ++K+WD A + + L+G N+ D +
Sbjct: 270 SFSHDSRLLASASGDGTVKIWDTAT---SFLQNTLEGHNEWVKSVVFSHDSRLLASASDD 326
Query: 409 GRKRSY-----TLYQ---GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
G + + TL + GH+ V S FS I S S D T+R+W T ++
Sbjct: 327 GTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFE 386
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
H V V F AS+S +IW ++ GH V+ V + + +
Sbjct: 387 DHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLL 446
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+ S D+TV++W ++G R GH + S+ S D R +AS +D T+ +WD A+
Sbjct: 447 ASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVP 506
Query: 581 CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLK 640
L H + V ++ +S + LLAS S D TVK+WD T+T L+ + +R+ S+
Sbjct: 507 LQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWD--TATGSLENTLEGHDDRVNSVS 564
Query: 641 TLP 643
P
Sbjct: 565 FSP 567
Score = 293 (108.2 bits), Expect = 7.6e-22, P = 7.6e-22
Identities = 66/201 (32%), Positives = 101/201 (50%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH V S SFSP + S+S D T+++W + +GHN V V F+
Sbjct: 428 EGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRL 487
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
AS+S D T +IW + + H + V V + + +A+ S D TV++WD ++G
Sbjct: 488 IASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATG 547
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY 597
GH + S++ SPD R +AS +DGT+ +W A+G G +LA+
Sbjct: 548 SLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAF 607
Query: 598 SCEGSLLASGSADCTVKLWDV 618
S +LLAS D TVK+WD+
Sbjct: 608 SHTSNLLASAMDDGTVKIWDM 628
Score = 231 (86.4 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 51/178 (28%), Positives = 87/178 (48%)
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
++++++ L + +KGH+ V V F+ AS+S D T +IW + GH
Sbjct: 245 LQVYASALLFSPAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGH 304
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
V V + + +A+ S D TV++WD ++G R+ GH + S+ S D R +AS
Sbjct: 305 NEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIAS 364
Query: 565 GDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTST 622
G D T+ +W+ +G H V ++++ + LAS S VK+WD T +
Sbjct: 365 GSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGS 422
Score = 209 (78.6 bits), Expect = 9.3e-13, P = 9.3e-13
Identities = 62/249 (24%), Positives = 111/249 (44%)
Query: 345 YTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT------ 398
+TF + + + S + D +A ++K+WD + G ++ + L+G +D
Sbjct: 383 HTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWD-TRTG--SLQNVLEGHDDCVNSVSF 439
Query: 399 TPREDIIGPNGRKRSYTLY-----------QGHSGPVYSASFSPLGDFILSSSADTTIRL 447
+P ++ R+ ++ +GH+ V S FS I S+S D T+++
Sbjct: 440 SPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKI 499
Query: 448 WSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSD 507
W T + H+ V V F+ AS+S D T +IW + GH
Sbjct: 500 WDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDR 559
Query: 508 VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDE 567
V+ V + + +A+ S D TV++W ++G F G + +SLA S +AS +
Sbjct: 560 VNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMD 619
Query: 568 DGTIMMWDL 576
DGT+ +WD+
Sbjct: 620 DGTVKIWDM 628
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 290 (107.1 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 68/199 (34%), Positives = 99/199 (49%)
Query: 428 SFSPLGDFILSSSADTTIRLWSTKLNA---NLVCYKGHNYPVWDVQFNPQGHYFASSSHD 484
+++P G + S D TIR+W + ++ V GH V V ++P G+Y AS+S D
Sbjct: 23 AWNPKGTLLASCGGDRTIRIWGREGDSWECKTVLQDGHQRTVRKVAWSPCGNYLASASFD 82
Query: 485 RTARIWSM--DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG---EC 539
T IW D + L ++ GH ++V CV W + N +AT S DK+V +W+V EC
Sbjct: 83 ATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNLLATCSRDKSVWIWEVDEENEYEC 142
Query: 540 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG--RCVTPLMGHTSCVWTLAY 597
V + H + + P +AS D + ++ C L GHTS VW L +
Sbjct: 143 VSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTF 202
Query: 598 SCEGSLLASGSADCTVKLW 616
G LAS S DCTVK+W
Sbjct: 203 DPSGQRLASCSDDCTVKIW 221
Score = 205 (77.2 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 50/167 (29%), Positives = 80/167 (47%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY---KGHNYPVWDVQFN 472
L GH V ++SP G+++ S+S D T +W K N + C +GH V V +
Sbjct: 56 LQDGHQRTVRKVAWSPCGNYLASASFDATTCIWKKK-NDDFECLTVLEGHENEVKCVAWA 114
Query: 473 PQGHYFASSSHDRTARIWSMDR---IQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
P G+ A+ S D++ IW +D + + ++ H DV V WH +A+ S D V
Sbjct: 115 PSGNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNV 174
Query: 530 RLW--DVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
++ + EC GH S + L P G+ +AS +D T+ +W
Sbjct: 175 CVYKEEDDDWECRATLEGHTSTVWGLTFDPSGQRLASCSDDCTVKIW 221
Score = 182 (69.1 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 48/155 (30%), Positives = 74/155 (47%)
Query: 467 WDVQFNPQGHYFASSSHDRTARIWSM--DRIQPLRIMA-GHLSDVDCVRWHINCNYIATG 523
W V +NP+G AS DRT RIW D + ++ GH V V W NY+A+
Sbjct: 20 WYVAWNPKGTLLASCGGDRTIRIWGREGDSWECKTVLQDGHQRTVRKVAWSPCGNYLASA 79
Query: 524 SSDKTVRLWDVSSG--ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR- 580
S D T +W + EC+ + GH + + +A +P G +A+ D ++ +W++
Sbjct: 80 SFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNLLATCSRDKSVWIWEVDEENE 139
Query: 581 --CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTV 613
CV+ + HT V + + LLAS S D V
Sbjct: 140 YECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNV 174
Score = 165 (63.1 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 43/133 (32%), Positives = 69/133 (51%)
Query: 493 DRIQPLRIMAGHLSDVDC--VRWHINCNYIATGSSDKTVRLW--DVSSGECVRIFI-GHR 547
D + L+ H D C V W+ +A+ D+T+R+W + S EC + GH+
Sbjct: 3 DTLALLQKFNAH-PDSRCWYVAWNPKGTLLASCGGDRTIRIWGREGDSWECKTVLQDGHQ 61
Query: 548 SMILSLAMSPDGRYMASGDEDGTIMMWDLASG--RCVTPLMGHTSCVWTLAYSCEGSLLA 605
+ +A SP G Y+AS D T +W + C+T L GH + V +A++ G+LLA
Sbjct: 62 RTVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNLLA 121
Query: 606 SGSADCTVKLWDV 618
+ S D +V +W+V
Sbjct: 122 TCSRDKSVWIWEV 134
Score = 46 (21.3 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 565 GDEDGTIMMWDLASGRCVTPLMG-HTSCVWTLAYSCEGSLLASGSADCTVKLW 616
G ++GT W +CV L G H V+ +A+ LA+ D V+++
Sbjct: 228 GGQEGTDAAW-----KCVCTLSGFHGRTVYDIAWCPLTGALATACGDDGVRVF 275
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 290 (107.1 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 69/213 (32%), Positives = 105/213 (49%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA---NLVCYKGHNYPVWDVQ 470
+TL QGH G ++ ++ P G+ S D IR+WS N + GH + +V+
Sbjct: 8 HTL-QGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVR 66
Query: 471 FNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVR 530
++P G Y AS+S D T IWS + + + GH ++V V W + +AT S DK+V
Sbjct: 67 WSPCGEYLASASFDATTAIWS--KHECTATLEGHENEVKSVSWSRSGGLLATCSRDKSVW 124
Query: 531 LWDVSSG---ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWD---LASG-RCVT 583
+W+V+ EC + H + + P +AS D TI M+ L S C
Sbjct: 125 IWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKEILASASYDNTIKMYAESALDSDWDCTA 184
Query: 584 PLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
L HTS VW++ + +G L S S D T+K+W
Sbjct: 185 TLSSHTSTVWSIDFDADGERLVSCSDDATLKIW 217
Score = 171 (65.3 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 42/130 (32%), Positives = 63/130 (48%)
Query: 492 MDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFI---GHRS 548
M R+ + GH + V WH N A+ DK +R+W +S I GH+
Sbjct: 1 MGRLILEHTLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKR 60
Query: 549 MILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGS 608
I + SP G Y+AS D T +W + C L GH + V ++++S G LLA+ S
Sbjct: 61 TIREVRWSPCGEYLASASFDATTAIW--SKHECTATLEGHENEVKSVSWSRSGGLLATCS 118
Query: 609 ADCTVKLWDV 618
D +V +W+V
Sbjct: 119 RDKSVWIWEV 128
>UNIPROTKB|B4JW81 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7222 "Drosophila grimshawi"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH916375 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_001995147.1 ProteinModelPortal:B4JW81 STRING:B4JW81
EnsemblMetazoa:FBtr0158402 GeneID:6569131 KEGG:dgr:Dgri_GH22988
FlyBase:FBgn0130445 InParanoid:B4JW81 Uniprot:B4JW81
Length = 331
Score = 290 (107.1 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 69/213 (32%), Positives = 103/213 (48%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA---NLVCYKGHNYPVWDVQ 470
+TL QGH G ++ ++ P G+ S D IR+WS N + GH + +V+
Sbjct: 8 HTL-QGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSQSGNTWTTKTILSDGHKRTIREVR 66
Query: 471 FNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVR 530
++P G Y AS+S D T IWS + GH ++V V W + +AT S DK+V
Sbjct: 67 WSPCGEYLASASFDATTAIWSKHECNAT--LEGHENEVKSVSWSQSGGLLATCSRDKSVW 124
Query: 531 LWDVSSG---ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWD---LASG-RCVT 583
+W+V+ EC + H + + P +AS D TI M+ L S C
Sbjct: 125 IWEVAGDDEFECAAVLNAHTQDVKRVVWHPSKEILASASYDNTIKMYAESALDSDWDCTA 184
Query: 584 PLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
L HTS VW++ + +G L S S D T+K+W
Sbjct: 185 TLSSHTSTVWSIDFEADGERLVSCSDDTTLKIW 217
Score = 165 (63.1 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 42/130 (32%), Positives = 62/130 (47%)
Query: 492 MDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFI---GHRS 548
M R+ + GH + V WH N A+ DK +R+W S I GH+
Sbjct: 1 MGRLILEHTLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSQSGNTWTTKTILSDGHKR 60
Query: 549 MILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGS 608
I + SP G Y+AS D T +W + C L GH + V ++++S G LLA+ S
Sbjct: 61 TIREVRWSPCGEYLASASFDATTAIW--SKHECNATLEGHENEVKSVSWSQSGGLLATCS 118
Query: 609 ADCTVKLWDV 618
D +V +W+V
Sbjct: 119 RDKSVWIWEV 128
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 289 (106.8 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 73/228 (32%), Positives = 112/228 (49%)
Query: 418 QGHSGPVYSASFSPLG-DFILSSSADTTIRLWS-TKLNANLV-----CYKGHNYPVWDVQ 470
+GH+G V S + +P D +LS S D T+ W T N +KGH++ V DV
Sbjct: 14 EGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDVT 73
Query: 471 FNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVR 530
+ G Y S+S DRT R+W ++ + + GH DV V N I + S DKTV+
Sbjct: 74 ISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVK 133
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRY--MASGDEDGTIMMWDLASGRCVTPLMGH 588
+W+ + GEC+ GH + ++ +SP + + S D T+ WDLA +GH
Sbjct: 134 VWN-TIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGH 192
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRL 636
T + + S +GSL AS D + LWD+ + + E K+ + L
Sbjct: 193 TGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAEVHAL 240
Score = 234 (87.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 65/223 (29%), Positives = 104/223 (46%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
++GHS V + S G + LS+S D T+RLW + + GH V V
Sbjct: 62 FKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLR 121
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN--CNYIATGSSDKTVRLWDV 534
S+S D+T ++W+ + + + GH V VR + + + + S DKTV+ WD+
Sbjct: 122 QIVSASRDKTVKVWNTIG-ECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDL 180
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ FIGH I + +SPDG AS +DG I++WDL + + L V
Sbjct: 181 ADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAE-VHA 239
Query: 595 LAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLR 637
LA+S LA+ + T+ K+ K +E+S + L+
Sbjct: 240 LAFSPNRYWLAAAT----------TSGIKIFKLQERSLLDELK 272
Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 54/214 (25%), Positives = 101/214 (47%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNP--Q 474
+ GH G V S S + I+S+S D T+++W+T + + GHN V V+ +P Q
Sbjct: 104 FVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWNT-IGECMATLTGHNDWVSAVRISPSDQ 162
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDV 534
S+S D+T + W + GH + C+ + + A+ D + LWD+
Sbjct: 163 SSTVISASWDKTVKSWDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDL 222
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPL-----MGHT 589
+ + + + ++ + +LA SP+ ++A+ G I ++ L + L +G T
Sbjct: 223 NKNKTLYT-LEAKAEVHALAFSPNRYWLAAATTSG-IKIFKLQERSLLDELKPEFAVGAT 280
Query: 590 SC---VWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+ +LA+S +G L +G D +++W V T
Sbjct: 281 AKDPEAISLAWSADGQNLFAGYTDNVIRVWQVMT 314
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 289 (106.8 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 73/228 (32%), Positives = 112/228 (49%)
Query: 418 QGHSGPVYSASFSPLG-DFILSSSADTTIRLWS-TKLNANLV-----CYKGHNYPVWDVQ 470
+GH+G V S + +P D +LS S D T+ W T N +KGH++ V DV
Sbjct: 14 EGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDVT 73
Query: 471 FNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVR 530
+ G Y S+S DRT R+W ++ + + GH DV V N I + S DKTV+
Sbjct: 74 ISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVK 133
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRY--MASGDEDGTIMMWDLASGRCVTPLMGH 588
+W+ + GEC+ GH + ++ +SP + + S D T+ WDLA +GH
Sbjct: 134 VWN-TIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGH 192
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRL 636
T + + S +GSL AS D + LWD+ + + E K+ + L
Sbjct: 193 TGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAEVHAL 240
Score = 234 (87.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 65/223 (29%), Positives = 104/223 (46%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
++GHS V + S G + LS+S D T+RLW + + GH V V
Sbjct: 62 FKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLR 121
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN--CNYIATGSSDKTVRLWDV 534
S+S D+T ++W+ + + + GH V VR + + + + S DKTV+ WD+
Sbjct: 122 QIVSASRDKTVKVWNTIG-ECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDL 180
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ FIGH I + +SPDG AS +DG I++WDL + + L V
Sbjct: 181 ADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAE-VHA 239
Query: 595 LAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLR 637
LA+S LA+ + T+ K+ K +E+S + L+
Sbjct: 240 LAFSPNRYWLAAAT----------TSGIKIFKLQERSLLDELK 272
Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 54/214 (25%), Positives = 101/214 (47%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNP--Q 474
+ GH G V S S + I+S+S D T+++W+T + + GHN V V+ +P Q
Sbjct: 104 FVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWNT-IGECMATLTGHNDWVSAVRISPSDQ 162
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDV 534
S+S D+T + W + GH + C+ + + A+ D + LWD+
Sbjct: 163 SSTVISASWDKTVKSWDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDL 222
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPL-----MGHT 589
+ + + + ++ + +LA SP+ ++A+ G I ++ L + L +G T
Sbjct: 223 NKNKTLYT-LEAKAEVHALAFSPNRYWLAAATTSG-IKIFKLQERSLLDELKPEFAVGAT 280
Query: 590 SC---VWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+ +LA+S +G L +G D +++W V T
Sbjct: 281 AKDPEAISLAWSADGQNLFAGYTDNVIRVWQVMT 314
>UNIPROTKB|B4LJT7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7244 "Drosophila virilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH940648 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_002049403.1 ProteinModelPortal:B4LJT7 STRING:B4LJT7
EnsemblMetazoa:FBtr0237487 GeneID:6626094 KEGG:dvi:Dvir_GJ21562
FlyBase:FBgn0208682 InParanoid:B4LJT7 Uniprot:B4LJT7
Length = 331
Score = 289 (106.8 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 69/213 (32%), Positives = 105/213 (49%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA---NLVCYKGHNYPVWDVQ 470
+TL QGH G ++ ++ P G+ S D IR+WS N + GH + +V+
Sbjct: 8 HTL-QGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVR 66
Query: 471 FNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVR 530
++P G Y AS+S D T IWS + + + GH ++V V W + +AT S DK+V
Sbjct: 67 WSPCGEYLASASFDATTAIWS--KHECTATLEGHENEVKSVSWSRSGGLLATCSRDKSVW 124
Query: 531 LWDVSSG---ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWD---LASG-RCVT 583
+W+V+ EC + H + + P +AS D TI M+ L S C
Sbjct: 125 IWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKEVLASASYDNTIKMFAESALDSDWDCTA 184
Query: 584 PLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
L HTS VW++ + +G L S S D T+K+W
Sbjct: 185 TLSSHTSTVWSIDFDADGERLVSCSDDATLKIW 217
Score = 170 (64.9 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 40/121 (33%), Positives = 60/121 (49%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFI---GHRSMILSLAMSP 557
+ GH + V WH N A+ DK +R+W +S I GH+ I + SP
Sbjct: 10 LQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWSP 69
Query: 558 DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
G Y+AS D T +W + C L GH + V ++++S G LLA+ S D +V +W+
Sbjct: 70 CGEYLASASFDATTAIW--SKHECTATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWE 127
Query: 618 V 618
V
Sbjct: 128 V 128
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 309 (113.8 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 61/203 (30%), Positives = 104/203 (51%)
Query: 433 GDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSM 492
G + + D + LWS ++ GH PV V+ N + S + R+W +
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 493 DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILS 552
+ + LR + GH +++ + +H ++A+GS D ++LWD+ CV + GH +
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 553 LAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCT 612
L SPDG+++AS +D T+ +WDL +G+ ++ GHT V + + LLASGS+D T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 613 VKLWDVTTSTKVLKTEEKSGTNR 635
++ WD+ V E + G R
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVR 235
Score = 245 (91.3 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 58/197 (29%), Positives = 96/197 (48%)
Query: 363 GSLVAGGFSDSSLKVWDMAK----LGQQAVSSGLQGENDTTPREDIIG--PNGRKRSYTL 416
G L+A G D + +W + K + +S ++ TP E I+ +G R + L
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 417 --------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
GH + S F P G+F+ S S DT I+LW + + Y+GH+ V
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
++F+P G + AS++ D T ++W + + + GH V+ V +H N +A+GSSD+T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 529 VRLWDVSSGECVRIFIG 545
+R WD+ + V G
Sbjct: 213 IRFWDLEKFQVVSCIEG 229
Score = 239 (89.2 bits), Expect = 8.9e-17, P = 8.9e-17
Identities = 50/169 (29%), Positives = 86/169 (50%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH+ PV S + + I++ S +IR+W + L GH + + F+P G +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
AS S D ++W + R + GH V C+R+ + ++A+ + D TV+LWD+++G+
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMG 587
+ F GH + + P+ +ASG D TI WDL + V+ + G
Sbjct: 181 MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEG 229
Score = 180 (68.4 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 77/292 (26%), Positives = 122/292 (41%)
Query: 365 LVAGGFSDSSLKVWDM--AKL-----GQQAVSSGLQ----GENDTTPREDI---IGPNGR 410
L+ G S++VWD+ AK+ G +A L GE + +D + R
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 411 KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQ 470
K Y+GHS V FSP G ++ S++ D T++LW + + GH PV V+
Sbjct: 137 KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVE 196
Query: 471 FNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCV-RWHIN---------CNYI 520
F+P + AS S DRT R W +++ Q + + G V W + C Y
Sbjct: 197 FHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRYAGSWVVGLSPPPKVVGCRYG 256
Query: 521 ATGSSDKTVRLWDVSSGECVRI--FIG---HRSMILSLAMSPDGRYMASGDEDGTIMMWD 575
A G S R + G F+ H + S+ +PDG + SG +D ++ ++
Sbjct: 257 A-GVSRSHHRSCSLFPGLPTAFPDFLRPTPHSRLPRSVLFNPDGCCLYSGCQD-SLRVYG 314
Query: 576 LASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
RC ++ V LA C L+ + V + V T+V +T
Sbjct: 315 WEPERCFDVVLVSWGKVADLAV-CNDQLIGVAFSQSNVSSY-VVDLTRVTRT 364
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 309 (113.8 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 62/186 (33%), Positives = 99/186 (53%)
Query: 434 DFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMD 493
D +++ S D T+++W + GH VW Q + G Y S S DRT ++WS
Sbjct: 267 DVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTV 326
Query: 494 RIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSL 553
L + GH S V C+ + + + TGS D T+R+WDV SG + GH + + +
Sbjct: 327 DGSLLHTLQGHTSTVRCMA--MAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCV 384
Query: 554 AMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTV 613
DG + SG D T+ +W+ +GRC+ L GH + V++L + E S++ SGS D ++
Sbjct: 385 QF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSI 442
Query: 614 KLWDVT 619
++WD T
Sbjct: 443 RVWDFT 448
Score = 304 (112.1 bits), Expect = 5.7e-24, P = 5.7e-24
Identities = 70/214 (32%), Positives = 112/214 (52%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNP 473
YTL GH+G V+++ S G +I+S S D T+++WST + L +GH V +
Sbjct: 290 YTLV-GHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM-- 346
Query: 474 QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
G + S D T R+W ++ + L + GH + V CV++ + + +G D TV++W+
Sbjct: 347 AGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWN 404
Query: 534 VSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA--SGR-CVTPLMGHTS 590
+G C+R GH + + SL + + SG D +I +WD G+ CV L GHTS
Sbjct: 405 AHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS 464
Query: 591 CVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
T G++L S +AD V++WD+ T V
Sbjct: 465 L--TSGMQLRGNILVSCNADSHVRVWDIHEGTCV 496
Score = 279 (103.3 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 74/238 (31%), Positives = 121/238 (50%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNP 473
+TL QGH+ V + + G +++ S DTT+R+W + +L GH+ V VQF+
Sbjct: 332 HTL-QGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFD- 387
Query: 474 QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
G S +D T +IW+ + +R + GH + V + + + + +GS D ++R+WD
Sbjct: 388 -GTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWD 446
Query: 534 VS--SG-ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
+ G ECV + GH S L+ M G + S + D + +WD+ G CV L GH S
Sbjct: 447 FTRPEGQECVALLQGHTS--LTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRS 504
Query: 591 CVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV--LKTEEKSGTN----RLRSLKTL 642
+ +L + +++A+ S D TVKLWD+ + L T + G RL S T+
Sbjct: 505 AITSLQWFGR-NMVATSSDDGTVKLWDIERGALIRDLVTLDSGGNGGCIWRLCSTSTM 561
Score = 222 (83.2 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 45/136 (33%), Positives = 75/136 (55%)
Query: 484 DRTARIWSMDRIQPLRIMAGHLSDV-DCVRWHINCNYIATGSSDKTVRLWDVSSGECVRI 542
D+ + W+ + I ++ GH V C++ H + + TGS D T+++W + GE +
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDV--LVTGSDDNTLKVWCIDKGEVMYT 291
Query: 543 FIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS 602
+GH + + +S GRY+ SG D T+ +W G + L GHTS V +A + GS
Sbjct: 292 LVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GS 349
Query: 603 LLASGSADCTVKLWDV 618
+L +GS D T+++WDV
Sbjct: 350 ILVTGSRDTTLRVWDV 365
Score = 179 (68.1 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 56/203 (27%), Positives = 90/203 (44%)
Query: 354 LNCASISQDGSLVAGGFSDSSLKVWD------MAKL-GQQAVSSGLQGENDTTPRE--DI 404
+ C +++ GS++ G D++L+VWD +A L G A +Q + T D
Sbjct: 341 VRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDF 398
Query: 405 IGP--NGRK-RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY-- 459
N R GH+ VYS F + S S DT+IR+W C
Sbjct: 399 TVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVAL 458
Query: 460 -KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCN 518
+GH +Q +G+ S + D R+W + + +++GH S + ++W N
Sbjct: 459 LQGHTSLTSGMQL--RGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQW-FGRN 515
Query: 519 YIATGSSDKTVRLWDVSSGECVR 541
+AT S D TV+LWD+ G +R
Sbjct: 516 MVATSSDDGTVKLWDIERGALIR 538
Score = 136 (52.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 31/103 (30%), Positives = 50/103 (48%)
Query: 525 SDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTP 584
+DK + W+ + + GH +++ D + +G +D T+ +W + G +
Sbjct: 233 ADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDD-VLVTGSDDNTLKVWCIDKGEVMYT 291
Query: 585 LMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
L+GHT VWT S G + SGS D TVK+W T +L T
Sbjct: 292 LVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWS-TVDGSLLHT 333
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 309 (113.8 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 62/186 (33%), Positives = 99/186 (53%)
Query: 434 DFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMD 493
D +++ S D T+++W + GH VW Q + G Y S S DRT ++WS
Sbjct: 267 DVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTV 326
Query: 494 RIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSL 553
L + GH S V C+ + + + TGS D T+R+WDV SG + GH + + +
Sbjct: 327 DGSLLHTLQGHTSTVRCMA--MAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCV 384
Query: 554 AMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTV 613
DG + SG D T+ +W+ +GRC+ L GH + V++L + E S++ SGS D ++
Sbjct: 385 QF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSI 442
Query: 614 KLWDVT 619
++WD T
Sbjct: 443 RVWDFT 448
Score = 304 (112.1 bits), Expect = 5.7e-24, P = 5.7e-24
Identities = 70/214 (32%), Positives = 112/214 (52%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNP 473
YTL GH+G V+++ S G +I+S S D T+++WST + L +GH V +
Sbjct: 290 YTLV-GHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM-- 346
Query: 474 QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
G + S D T R+W ++ + L + GH + V CV++ + + +G D TV++W+
Sbjct: 347 AGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWN 404
Query: 534 VSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA--SGR-CVTPLMGHTS 590
+G C+R GH + + SL + + SG D +I +WD G+ CV L GHTS
Sbjct: 405 AHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS 464
Query: 591 CVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
T G++L S +AD V++WD+ T V
Sbjct: 465 L--TSGMQLRGNILVSCNADSHVRVWDIHEGTCV 496
Score = 279 (103.3 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 74/238 (31%), Positives = 121/238 (50%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNP 473
+TL QGH+ V + + G +++ S DTT+R+W + +L GH+ V VQF+
Sbjct: 332 HTL-QGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFD- 387
Query: 474 QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
G S +D T +IW+ + +R + GH + V + + + + +GS D ++R+WD
Sbjct: 388 -GTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWD 446
Query: 534 VS--SG-ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
+ G ECV + GH S L+ M G + S + D + +WD+ G CV L GH S
Sbjct: 447 FTRPEGQECVALLQGHTS--LTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRS 504
Query: 591 CVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV--LKTEEKSGTN----RLRSLKTL 642
+ +L + +++A+ S D TVKLWD+ + L T + G RL S T+
Sbjct: 505 AITSLQWFGR-NMVATSSDDGTVKLWDIERGALIRDLVTLDSGGNGGCIWRLCSTSTM 561
Score = 222 (83.2 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 45/136 (33%), Positives = 75/136 (55%)
Query: 484 DRTARIWSMDRIQPLRIMAGHLSDV-DCVRWHINCNYIATGSSDKTVRLWDVSSGECVRI 542
D+ + W+ + I ++ GH V C++ H + + TGS D T+++W + GE +
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDV--LVTGSDDNTLKVWCIDKGEVMYT 291
Query: 543 FIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS 602
+GH + + +S GRY+ SG D T+ +W G + L GHTS V +A + GS
Sbjct: 292 LVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GS 349
Query: 603 LLASGSADCTVKLWDV 618
+L +GS D T+++WDV
Sbjct: 350 ILVTGSRDTTLRVWDV 365
Score = 179 (68.1 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 56/203 (27%), Positives = 90/203 (44%)
Query: 354 LNCASISQDGSLVAGGFSDSSLKVWD------MAKL-GQQAVSSGLQGENDTTPRE--DI 404
+ C +++ GS++ G D++L+VWD +A L G A +Q + T D
Sbjct: 341 VRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDF 398
Query: 405 IGP--NGRK-RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY-- 459
N R GH+ VYS F + S S DT+IR+W C
Sbjct: 399 TVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVAL 458
Query: 460 -KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCN 518
+GH +Q +G+ S + D R+W + + +++GH S + ++W N
Sbjct: 459 LQGHTSLTSGMQL--RGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQW-FGRN 515
Query: 519 YIATGSSDKTVRLWDVSSGECVR 541
+AT S D TV+LWD+ G +R
Sbjct: 516 MVATSSDDGTVKLWDIERGALIR 538
Score = 136 (52.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 31/103 (30%), Positives = 50/103 (48%)
Query: 525 SDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTP 584
+DK + W+ + + GH +++ D + +G +D T+ +W + G +
Sbjct: 233 ADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDD-VLVTGSDDNTLKVWCIDKGEVMYT 291
Query: 585 LMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
L+GHT VWT S G + SGS D TVK+W T +L T
Sbjct: 292 LVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWS-TVDGSLLHT 333
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 309 (113.8 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 66/212 (31%), Positives = 115/212 (54%)
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
G +S + +GH V + G+ I+S S D T+++WS L GH VW
Sbjct: 248 GELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 306
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
Q + + S S DRT ++W+ + + + + GH S V C+ H++ + +GS D T
Sbjct: 307 SQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM--HLHEKRVVSGSRDAT 362
Query: 529 VRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
+R+WD+ +G+C+ + +GH + + + DGR + SG D + +WD + C+ L GH
Sbjct: 363 LRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGH 420
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
T+ V++L + +G + SGS D ++++WDV T
Sbjct: 421 TNRVYSLQF--DGIHVVSGSLDTSIRVWDVET 450
Score = 272 (100.8 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 79/299 (26%), Positives = 140/299 (46%)
Query: 363 GSLVAGGFSDSSLKVWDMAKLGQ--QAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGH 420
G+ + G D++LKVW A G+ + + G + R++II R+ ++
Sbjct: 271 GNRIVSGSDDNTLKVWS-AVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAE 329
Query: 421 SGPVYSASFSPLGDF---------ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
+G + ++S S D T+R+W + L GH V VQ+
Sbjct: 330 TGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 389
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+ G S ++D ++W + L + GH + V +++ + ++ +GS D ++R+
Sbjct: 390 D--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRV 445
Query: 532 WDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMG---H 588
WDV +G C+ GH+S L+ M + SG+ D T+ +WD+ +G+C+ L G H
Sbjct: 446 WDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKH 503
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV--LKTEEKSGTN----RLRSLKT 641
S V L ++ + + + S D TVKLWD+ T + L T E G+ R+R+ T
Sbjct: 504 QSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT 560
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 304 (112.1 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 69/218 (31%), Positives = 110/218 (50%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
+ GH +YS F+ G I S S D T+RLW + L + + V V +P
Sbjct: 384 FAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFTIED-GVTTVAISPDTK 442
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAG---HLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
Y A+ S D++ R+W + + P+ + G H V V + N + TGS DKT++LW+
Sbjct: 443 YVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWE 502
Query: 534 VSS------------GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRC 581
+++ G CV+ F GHR +LS+A++PD +++ SG +D + WD +G
Sbjct: 503 LATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGST 562
Query: 582 VTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVT 619
L GH + V ++A S G A+GS D ++W T
Sbjct: 563 QLMLQGHKNSVISVAPSPTGGFFATGSGDMRARIWSYT 600
Score = 291 (107.5 bits), Expect = 5.1e-23, Sum P(2) = 5.1e-23
Identities = 77/243 (31%), Positives = 121/243 (49%)
Query: 421 SGPVY--SASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
+G +Y S FSP G ++ + + D IR+W + + GH ++ + F G
Sbjct: 344 TGDLYIRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTI 403
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSD-VDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
AS S DRT R+W ++ L + + D V V + Y+A GS DK+VR+WD++ G
Sbjct: 404 ASGSGDRTVRLWDIENGTALTVFT--IEDGVTTVAISPDTKYVAAGSLDKSVRVWDLTQG 461
Query: 538 ---ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS------------GRCV 582
E + GH+ + S+A SP+GR + +G D TI +W+LA+ GRCV
Sbjct: 462 CPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCV 521
Query: 583 TPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT-STKVLKTEEKSGTNRLRSLKT 641
GH V ++A + + + SGS D V+ WD T ST+++ K N + S+
Sbjct: 522 KTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHK---NSVISVAP 578
Query: 642 LPT 644
PT
Sbjct: 579 SPT 581
Score = 225 (84.3 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 59/188 (31%), Positives = 102/188 (54%)
Query: 452 LNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSD---- 507
L+ +LV H V V+F+ G Y A+ + R+A+I+ ++ + + ++ +D
Sbjct: 288 LDVDLVHTLQHESVVCCVRFSADGKYVATGCN-RSAQIFDVNTGEKVCVLQDDNADTTGD 346
Query: 508 --VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRI-FIGHRSMILSLAMSPDGRYMAS 564
+ V + + Y+ATG+ DK +R+WD+++ +RI F GH I SL + DGR +AS
Sbjct: 347 LYIRSVCFSPDGKYLATGAEDKQIRVWDITT-RTIRIQFAGHEQDIYSLDFARDGRTIAS 405
Query: 565 GDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
G D T+ +WD+ +G +T V T+A S + +A+GS D +V++WD+T V
Sbjct: 406 GSGDRTVRLWDIENGTALTVFTIEDG-VTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPV 464
Query: 625 LKTEEKSG 632
+ E G
Sbjct: 465 ERLEGPDG 472
Score = 207 (77.9 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 47/141 (33%), Positives = 80/141 (56%)
Query: 488 RIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHR 547
R+ +D + L+ H S V CVR+ + Y+ATG + ++ +++DV++GE V +
Sbjct: 286 RVLDVDLVHTLQ----HESVVCCVRFSADGKYVATGCN-RSAQIFDVNTGEKVCVLQDDN 340
Query: 548 S------MILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEG 601
+ I S+ SPDG+Y+A+G ED I +WD+ + GH +++L ++ +G
Sbjct: 341 ADTTGDLYIRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDG 400
Query: 602 SLLASGSADCTVKLWDVTTST 622
+ASGS D TV+LWD+ T
Sbjct: 401 RTIASGSGDRTVRLWDIENGT 421
Score = 134 (52.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 29/98 (29%), Positives = 49/98 (50%)
Query: 399 TPREDIIGPNGRK-RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLV 457
TPR ++ + R ++GH V S + +P +++S S D ++ W + + +
Sbjct: 505 TPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQL 564
Query: 458 CYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRI 495
+GH V V +P G +FA+ S D ARIWS R+
Sbjct: 565 MLQGHKNSVISVAPSPTGGFFATGSGDMRARIWSYTRM 602
Score = 124 (48.7 bits), Expect = 0.00034, P = 0.00034
Identities = 47/189 (24%), Positives = 75/189 (39%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
T +G+ +IS D VA G D S++VWD+ QG P E +
Sbjct: 424 TVFTIEDGVTTVAISPDTKYVAAGSLDKSVRVWDLT-----------QG----CPVERLE 468
Query: 406 GPNGRKRS-YTLYQGHSG-PVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHN 463
GP+G K S Y++ +G + + S ++ ++ +K + ++GH
Sbjct: 469 GPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHR 528
Query: 464 YPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATG 523
V V P + S S DR + W ++ GH + V V + ATG
Sbjct: 529 DFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATG 588
Query: 524 SSDKTVRLW 532
S D R+W
Sbjct: 589 SGDMRARIW 597
Score = 50 (22.7 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 338 ALPSVSFYTFINT--HNGLNCA-SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQG 394
A+P V ++T H + C S DG VA G + S+ +++D+ G++ LQ
Sbjct: 283 AVPRVLDVDLVHTLQHESVVCCVRFSADGKYVATGCNRSA-QIFDV-NTGEKVCV--LQD 338
Query: 395 EN-DTT 399
+N DTT
Sbjct: 339 DNADTT 344
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 273 (101.2 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 66/199 (33%), Positives = 97/199 (48%)
Query: 428 SFSPLGDFILSSSADTTIRLWSTKLNA---NLVCYKGHNYPVWDVQFNPQGHYFASSSHD 484
+++P G + S D IR+W + ++ V GH V V ++P G+Y AS+S D
Sbjct: 23 AWNPKGTLLASCGGDRAIRIWGREGDSWECKTVLQDGHQRAVRKVAWSPCGNYLASASFD 82
Query: 485 RTARIWSM--DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG---EC 539
T IW D + L ++ GH ++V CV W + N +AT S DK+V +W+V EC
Sbjct: 83 ATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNQLATCSRDKSVWIWEVDEEDEYEC 142
Query: 540 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG--RCVTPLMGHTSCVWTLAY 597
V + H + + P +AS D + ++ C L GHTS VW L +
Sbjct: 143 VSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTF 202
Query: 598 SCEGSLLASGSADCTVKLW 616
G LAS S D TVK+W
Sbjct: 203 DPSGQRLASCSDDRTVKIW 221
Score = 218 (81.8 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 62/218 (28%), Positives = 101/218 (46%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY---KGHNYPVWDVQFN 472
L GH V ++SP G+++ S+S D T +W K N + C +GH V V +
Sbjct: 56 LQDGHQRAVRKVAWSPCGNYLASASFDATTCIWKKK-NDDFECLTVLEGHENEVKCVAWA 114
Query: 473 PQGHYFASSSHDRTARIWSMDR---IQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
P G+ A+ S D++ IW +D + + ++ H DV V WH +A+ S D V
Sbjct: 115 PSGNQLATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNV 174
Query: 530 RLW--DVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW-DLASG------- 579
++ + EC GH S + L P G+ +AS +D T+ +W + G
Sbjct: 175 CVYKEEDDDWECRATLEGHTSTVWGLTFDPSGQRLASCSDDRTVKIWKECQPGGGQDTAW 234
Query: 580 RCVTPLMG-HTSCVWTLAYSCEGSLLASGSADCTVKLW 616
+CV L G H V+ +A+ LA+ D V+++
Sbjct: 235 KCVCTLSGFHGRTVYDIAWCPLTGALATACGDDGVRVF 272
Score = 176 (67.0 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 47/155 (30%), Positives = 73/155 (47%)
Query: 467 WDVQFNPQGHYFASSSHDRTARIWSM--DRIQPLRIMA-GHLSDVDCVRWHINCNYIATG 523
W V +NP+G AS DR RIW D + ++ GH V V W NY+A+
Sbjct: 20 WYVAWNPKGTLLASCGGDRAIRIWGREGDSWECKTVLQDGHQRAVRKVAWSPCGNYLASA 79
Query: 524 SSDKTVRLWDVSSG--ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG-- 579
S D T +W + EC+ + GH + + +A +P G +A+ D ++ +W++
Sbjct: 80 SFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNQLATCSRDKSVWIWEVDEEDE 139
Query: 580 -RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTV 613
CV+ + HT V + + LLAS S D V
Sbjct: 140 YECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNV 174
Score = 154 (59.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 41/133 (30%), Positives = 67/133 (50%)
Query: 493 DRIQPLRIMAGHLSDVDC--VRWHINCNYIATGSSDKTVRLW--DVSSGECVRIFI-GHR 547
D + L+ H D C V W+ +A+ D+ +R+W + S EC + GH+
Sbjct: 3 DTLALLQKFNAH-PDSRCWYVAWNPKGTLLASCGGDRAIRIWGREGDSWECKTVLQDGHQ 61
Query: 548 SMILSLAMSPDGRYMASGDEDGTIMMWDLASG--RCVTPLMGHTSCVWTLAYSCEGSLLA 605
+ +A SP G Y+AS D T +W + C+T L GH + V +A++ G+ LA
Sbjct: 62 RAVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNQLA 121
Query: 606 SGSADCTVKLWDV 618
+ S D +V +W+V
Sbjct: 122 TCSRDKSVWIWEV 134
Score = 39 (18.8 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 349 NTHNGLNCASISQD--GSLVAGGFSDSSLKVW 378
N H C ++ + G+L+A D ++++W
Sbjct: 12 NAHPDSRCWYVAWNPKGTLLASCGGDRAIRIW 43
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 309 (113.8 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 66/212 (31%), Positives = 115/212 (54%)
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
G +S + +GH V + G+ I+S S D T+++WS L GH VW
Sbjct: 288 GELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 346
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
Q + + S S DRT ++W+ + + + + GH S V C+ H++ + +GS D T
Sbjct: 347 SQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM--HLHEKRVVSGSRDAT 402
Query: 529 VRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
+R+WD+ +G+C+ + +GH + + + DGR + SG D + +WD + C+ L GH
Sbjct: 403 LRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGH 460
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
T+ V++L + +G + SGS D ++++WDV T
Sbjct: 461 TNRVYSLQF--DGIHVVSGSLDTSIRVWDVET 490
Score = 272 (100.8 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 79/299 (26%), Positives = 140/299 (46%)
Query: 363 GSLVAGGFSDSSLKVWDMAKLGQ--QAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGH 420
G+ + G D++LKVW A G+ + + G + R++II R+ ++
Sbjct: 311 GNRIVSGSDDNTLKVWS-AVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAE 369
Query: 421 SGPVYSASFSPLGDF---------ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
+G + ++S S D T+R+W + L GH V VQ+
Sbjct: 370 TGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 429
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+ G S ++D ++W + L + GH + V +++ + ++ +GS D ++R+
Sbjct: 430 D--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRV 485
Query: 532 WDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMG---H 588
WDV +G C+ GH+S L+ M + SG+ D T+ +WD+ +G+C+ L G H
Sbjct: 486 WDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKH 543
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV--LKTEEKSGTN----RLRSLKT 641
S V L ++ + + + S D TVKLWD+ T + L T E G+ R+R+ T
Sbjct: 544 QSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT 600
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 309 (113.8 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 66/212 (31%), Positives = 115/212 (54%)
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
G +S + +GH V + G+ I+S S D T+++WS L GH VW
Sbjct: 290 GELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 348
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
Q + + S S DRT ++W+ + + + + GH S V C+ H++ + +GS D T
Sbjct: 349 SQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM--HLHEKRVVSGSRDAT 404
Query: 529 VRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
+R+WD+ +G+C+ + +GH + + + DGR + SG D + +WD + C+ L GH
Sbjct: 405 LRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGH 462
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
T+ V++L + +G + SGS D ++++WDV T
Sbjct: 463 TNRVYSLQF--DGIHVVSGSLDTSIRVWDVET 492
Score = 272 (100.8 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 79/299 (26%), Positives = 140/299 (46%)
Query: 363 GSLVAGGFSDSSLKVWDMAKLGQ--QAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGH 420
G+ + G D++LKVW A G+ + + G + R++II R+ ++
Sbjct: 313 GNRIVSGSDDNTLKVWS-AVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAE 371
Query: 421 SGPVYSASFSPLGDF---------ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
+G + ++S S D T+R+W + L GH V VQ+
Sbjct: 372 TGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 431
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+ G S ++D ++W + L + GH + V +++ + ++ +GS D ++R+
Sbjct: 432 D--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRV 487
Query: 532 WDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMG---H 588
WDV +G C+ GH+S L+ M + SG+ D T+ +WD+ +G+C+ L G H
Sbjct: 488 WDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKH 545
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV--LKTEEKSGTN----RLRSLKT 641
S V L ++ + + + S D TVKLWD+ T + L T E G+ R+R+ T
Sbjct: 546 QSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT 602
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 309 (113.8 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 61/203 (30%), Positives = 104/203 (51%)
Query: 433 GDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSM 492
G + + D + LWS ++ GH PV V+ N + S + R+W +
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 493 DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILS 552
+ + LR + GH +++ + +H ++A+GS D ++LWD+ CV + GH +
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 553 LAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCT 612
L SPDG+++AS +D T+ +WDL +G+ ++ GHT V + + LLASGS+D T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 613 VKLWDVTTSTKVLKTEEKSGTNR 635
++ WD+ V E + G R
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVR 235
Score = 184 (69.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 56/208 (26%), Positives = 96/208 (46%)
Query: 365 LVAGGFSDSSLKVWDM--AKL-----GQQAVSSGLQ----GENDTTPREDI---IGPNGR 410
L+ G S++VWD+ AK+ G +A L GE + +D + R
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
Query: 411 KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQ 470
K Y+GHS V FSP G ++ S++ D T++LW + + GH PV V+
Sbjct: 137 KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVE 196
Query: 471 FNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVR 530
F+P + AS S DRT R W +++ Q + + G V V ++ + + +G D ++R
Sbjct: 197 FHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLR 255
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPD 558
++ C + + + + LA+ D
Sbjct: 256 VYGWEPERCFDVVLVNWGKVADLAICND 283
Score = 124 (48.7 bits), Expect = 0.00038, P = 0.00038
Identities = 43/149 (28%), Positives = 68/149 (45%)
Query: 363 GSLVAGGFSDSSLKVWDMAKLG--------QQAVSS---GLQGENDTTPREDI---IGPN 408
G VA G D+++K+WD+ + G QAV G+ + +D +
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSS-SADTTIRLWSTKLNANLVCYKGHNYPVW 467
+ + + GH+GPV F P +++L+S S+D TIR W + + C +G PV
Sbjct: 177 TAGKMMSEFPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVR 235
Query: 468 DVQFNPQGHYFASSSHDRTARI--WSMDR 494
V FNP G S D + R+ W +R
Sbjct: 236 SVLFNPDGCCLYSGCQD-SLRVYGWEPER 263
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 309 (113.8 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 61/203 (30%), Positives = 104/203 (51%)
Query: 433 GDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSM 492
G + + D + LWS ++ GH PV V+ N + S + R+W +
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 493 DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILS 552
+ + LR + GH +++ + +H ++A+GS D ++LWD+ CV + GH +
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 553 LAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCT 612
L SPDG+++AS +D T+ +WDL +G+ ++ GHT V + + LLASGS+D T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 613 VKLWDVTTSTKVLKTEEKSGTNR 635
++ WD+ V E + G R
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVR 235
Score = 292 (107.8 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 77/279 (27%), Positives = 132/279 (47%)
Query: 363 GSLVAGGFSDSSLKVWDMAK----LGQQAVSSGLQGENDTTPREDIIG--PNGRKRSYTL 416
G L+A G D + +W + K + +S ++ TP E I+ +G R + L
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 417 --------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
GH + S F P G+F+ S S DT I+LW + + Y+GH+ V
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
++F+P G + AS++ D T ++W + + + GH V+ V +H N +A+GSSD+T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 529 VRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
+R WD+ + V G + S+ +PDG + SG +D ++ ++ RC ++ +
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWEPERCFDVVLVN 271
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
V LA C L+ + V + V T+V +T
Sbjct: 272 WGKVADLAI-CNDQLIGVAFSQSNVSSY-VVDLTRVTRT 308
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 309 (113.8 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 61/203 (30%), Positives = 104/203 (51%)
Query: 433 GDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSM 492
G + + D + LWS ++ GH PV V+ N + S + R+W +
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 493 DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILS 552
+ + LR + GH +++ + +H ++A+GS D ++LWD+ CV + GH +
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 553 LAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCT 612
L SPDG+++AS +D T+ +WDL +G+ ++ GHT V + + LLASGS+D T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 613 VKLWDVTTSTKVLKTEEKSGTNR 635
++ WD+ V E + G R
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVR 235
Score = 290 (107.1 bits), Expect = 2.8e-22, P = 2.8e-22
Identities = 77/279 (27%), Positives = 131/279 (46%)
Query: 363 GSLVAGGFSDSSLKVWDMAK----LGQQAVSSGLQGENDTTPREDIIG--PNGRKRSYTL 416
G L+A G D + +W + K + +S ++ TP E I+ +G R + L
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 417 --------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
GH + S F P G+F+ S S DT I+LW + + Y+GH+ V
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
++F+P G + AS++ D T ++W + + + GH V+ V +H N +A+GSSD+T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 529 VRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
+R WD+ + V G + S+ +PDG + SG +D ++ ++ RC ++
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWEPERCFDVVLVS 271
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
V LA C L+ + V + V T+V +T
Sbjct: 272 WGKVADLAV-CNDQLIGVAFSQSNVSSY-VVDLTRVTRT 308
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 309 (113.8 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 61/203 (30%), Positives = 104/203 (51%)
Query: 433 GDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSM 492
G + + D + LWS ++ GH PV V+ N + S + R+W +
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 493 DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILS 552
+ + LR + GH +++ + +H ++A+GS D ++LWD+ CV + GH +
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 553 LAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCT 612
L SPDG+++AS +D T+ +WDL +G+ ++ GHT V + + LLASGS+D T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 613 VKLWDVTTSTKVLKTEEKSGTNR 635
++ WD+ V E + G R
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVR 235
Score = 292 (107.8 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 77/279 (27%), Positives = 132/279 (47%)
Query: 363 GSLVAGGFSDSSLKVWDMAK----LGQQAVSSGLQGENDTTPREDIIG--PNGRKRSYTL 416
G L+A G D + +W + K + +S ++ TP E I+ +G R + L
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 417 --------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
GH + S F P G+F+ S S DT I+LW + + Y+GH+ V
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
++F+P G + AS++ D T ++W + + + GH V+ V +H N +A+GSSD+T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 529 VRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
+R WD+ + V G + S+ +PDG + SG +D ++ ++ RC ++ +
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWEPERCFDVVLVN 271
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
V LA C L+ + V + V T+V +T
Sbjct: 272 WGKVADLAI-CNDQLIGVAFSQSNVSSY-VVDLTRVTRT 308
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 309 (113.8 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 61/203 (30%), Positives = 104/203 (51%)
Query: 433 GDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSM 492
G + + D + LWS ++ GH PV V+ N + S + R+W +
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 493 DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILS 552
+ + LR + GH +++ + +H ++A+GS D ++LWD+ CV + GH +
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 553 LAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCT 612
L SPDG+++AS +D T+ +WDL +G+ ++ GHT V + + LLASGS+D T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 613 VKLWDVTTSTKVLKTEEKSGTNR 635
++ WD+ V E + G R
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVR 235
Score = 301 (111.0 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 78/279 (27%), Positives = 132/279 (47%)
Query: 363 GSLVAGGFSDSSLKVWDMAK----LGQQAVSSGLQGENDTTPREDIIG--PNGRKRSYTL 416
G L+A G D + +W + K + +S ++ TP E I+ +G R + L
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 417 --------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
GH + S F P G+F+ S S DT I+LW + + Y+GH+ V
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
++F+P G + AS++ D T ++W + + + GH V+ V +H N +A+GSSD+T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 529 VRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
+R WD+ + V G + S+ +PDG + SG +D ++ ++ RC ++ H
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQD-SLRVYGWEPERCFDVVLVH 271
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
V LA C L+ + V + V T+V +T
Sbjct: 272 WGKVADLAI-CNNQLIGVAFSQSNVSSY-VVDLTRVTRT 308
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 309 (113.8 bits), Expect = 2.7e-24, Sum P(2) = 2.7e-24
Identities = 66/212 (31%), Positives = 115/212 (54%)
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
G +S + +GH V + G+ I+S S D T+++WS L GH VW
Sbjct: 368 GELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 426
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
Q + + S S DRT ++W+ + + + + GH S V C+ H++ + +GS D T
Sbjct: 427 SQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM--HLHEKRVVSGSRDAT 482
Query: 529 VRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
+R+WD+ +G+C+ + +GH + + + DGR + SG D + +WD + C+ L GH
Sbjct: 483 LRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGH 540
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
T+ V++L + +G + SGS D ++++WDV T
Sbjct: 541 TNRVYSLQF--DGIHVVSGSLDTSIRVWDVET 570
Score = 272 (100.8 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 79/299 (26%), Positives = 140/299 (46%)
Query: 363 GSLVAGGFSDSSLKVWDMAKLGQ--QAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGH 420
G+ + G D++LKVW A G+ + + G + R++II R+ ++
Sbjct: 391 GNRIVSGSDDNTLKVWS-AVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAE 449
Query: 421 SGPVYSASFSPLGDF---------ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
+G + ++S S D T+R+W + L GH V VQ+
Sbjct: 450 TGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 509
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+ G S ++D ++W + L + GH + V +++ + ++ +GS D ++R+
Sbjct: 510 D--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRV 565
Query: 532 WDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMG---H 588
WDV +G C+ GH+S L+ M + SG+ D T+ +WD+ +G+C+ L G H
Sbjct: 566 WDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKH 623
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV--LKTEEKSGTN----RLRSLKT 641
S V L ++ + + + S D TVKLWD+ T + L T E G+ R+R+ T
Sbjct: 624 QSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT 680
Score = 46 (21.3 bits), Expect = 2.7e-24, Sum P(2) = 2.7e-24
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 47 DPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSS--LDLYKHELLHVLY 94
+ E+ + F +S+D +R +DE++ S T SS +DL H+L Y
Sbjct: 115 EEEMDQESDDFDQSDDS-SR-EDEHTHTNSVTNSSSIVDLPVHQLSSPFY 162
Score = 44 (20.5 bits), Expect = 4.3e-24, Sum P(2) = 4.3e-24
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 234 DSLENRLEKTG--LISDSEKAEGENKEAEIDE 263
DS + +LE+ IS E + G +E E DE
Sbjct: 71 DSQQGQLEENNNRFISVDEDSSGNQEEQEEDE 102
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 307 (113.1 bits), Expect = 2.8e-24, P = 2.8e-24
Identities = 73/220 (33%), Positives = 110/220 (50%)
Query: 410 RKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNAN-LVCYKGHNYPVWD 468
+KR Y L GH +YS FS G ++S S D T+ LW + L+ + V
Sbjct: 377 QKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDG--VTT 434
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
V F+P G + A+ S D+ RIW+ + + GH V V + + Y+ +GS D T
Sbjct: 435 VMFSPDGQFIAAGSLDKVIRIWTSSGTL-VEQLHGHEESVYSVAFSPDGKYLVSGSLDNT 493
Query: 529 VRLWD---VSS---------GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
++LW+ VS+ G C + F GH+ ILS+ +SPDG+++ SG +D TI W
Sbjct: 494 IKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSP 553
Query: 577 ASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
S L GH + V ++A S G A+GS D ++W
Sbjct: 554 DSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIW 593
Score = 273 (101.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 65/206 (31%), Positives = 97/206 (47%)
Query: 424 VYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSH 483
V S +FSP G ++ + D IR+W GH ++ + F+ G S S
Sbjct: 349 VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSG 408
Query: 484 DRTARIWSMDRIQPLRIMAGHLSD-VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRI 542
DRT +W ++ + I+ H D V V + + +IA GS DK +R+W SSG V
Sbjct: 409 DRTVCLWDVEAGEQKLIL--HTDDGVTTVMFSPDGQFIAAGSLDKVIRIW-TSSGTLVEQ 465
Query: 543 FIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA------------SGRCVTPLMGHTS 590
GH + S+A SPDG+Y+ SG D TI +W+L G C GH
Sbjct: 466 LHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKD 525
Query: 591 CVWTLAYSCEGSLLASGSADCTVKLW 616
+ ++ S +G + SGS D T++ W
Sbjct: 526 FILSVTVSPDGKWIISGSKDRTIQFW 551
Score = 271 (100.5 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 58/173 (33%), Positives = 98/173 (56%)
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
+G Y V V F+P G Y A+ D+ RIW + + + R++ GH ++ + + +
Sbjct: 344 EGDLY-VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKT 402
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
+ +GS D+TV LWDV +GE ++ + + ++ SPDG+++A+G D I +W +SG
Sbjct: 403 LVSGSGDRTVCLWDVEAGE-QKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWT-SSG 460
Query: 580 RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
V L GH V+++A+S +G L SGS D T+KLW++ + V + K G
Sbjct: 461 TLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEG 513
Score = 190 (71.9 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 45/134 (33%), Positives = 75/134 (55%)
Query: 504 HLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSM------ILSLAMSP 557
H S + VR+ + ++ATG + + +++V +G+ + + S + S+A SP
Sbjct: 298 HTSVICYVRFSADGKFLATGCN-RAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSP 356
Query: 558 DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
DG+Y+A+G ED I +WD+A R L GH +++L +S +G L SGS D TV LWD
Sbjct: 357 DGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWD 416
Query: 618 VTTSTK--VLKTEE 629
V + +L T++
Sbjct: 417 VEAGEQKLILHTDD 430
Score = 163 (62.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 44/136 (32%), Positives = 68/136 (50%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLY 417
+ S DG + G D+++K+W++ + A S +G I K+++T
Sbjct: 477 AFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEG--------GIC-----KQTFT-- 521
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH + S + SP G +I+S S D TI+ WS + + +GHN V V +P GH
Sbjct: 522 -GHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHC 580
Query: 478 FASSSHDRTARIWSMD 493
FA+ S D ARIWS +
Sbjct: 581 FATGSGDLRARIWSYE 596
Score = 150 (57.9 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 42/150 (28%), Positives = 72/150 (48%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGE----NDTTPREDIIGPNGRKRS 413
+ S DG +A G D +++WD+A+ + +G + E + + + ++ +G R+
Sbjct: 353 AFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSG-DRT 411
Query: 414 YTLYQGHSGP----------VYSASFSPLGDFILSSSADTTIRLWSTKLNANLV-CYKGH 462
L+ +G V + FSP G FI + S D IR+W++ + LV GH
Sbjct: 412 VCLWDVEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTS--SGTLVEQLHGH 469
Query: 463 NYPVWDVQFNPQGHYFASSSHDRTARIWSM 492
V+ V F+P G Y S S D T ++W +
Sbjct: 470 EESVYSVAFSPDGKYLVSGSLDNTIKLWEL 499
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 286 (105.7 bits), Expect = 2.9e-24, P = 2.9e-24
Identities = 65/205 (31%), Positives = 99/205 (48%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA-NLVCYKGHNYPVWDVQFNPQ 474
L GH G VY F P G + SS D I +W+ + N KGH+ V ++ +N
Sbjct: 51 LLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTD 110
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVD-CVRWHINCNYIATGSSDKTVRLWD 533
G S+S D+T +W + + ++ + GH S V+ C TGS D TV+LWD
Sbjct: 111 GSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWD 170
Query: 534 VSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVW 593
+ V F + +LS+ + + SG D I +WDL + + + GH V
Sbjct: 171 IRKKASVHTF-QNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVT 229
Query: 594 TLAYSCEGSLLASGSADCTVKLWDV 618
L+ S +GS L S S D +V++WD+
Sbjct: 230 GLSLSADGSYLLSNSMDNSVRVWDI 254
Score = 240 (89.5 bits), Expect = 5.7e-18, P = 5.7e-18
Identities = 61/234 (26%), Positives = 108/234 (46%)
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
G +Y +GHSG V ++ G + S+S D T+ +W ++ + KGH V
Sbjct: 87 GDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNS 146
Query: 469 VQFNPQGHYFA-SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDK 527
+G A + S D T ++W + + + + V V ++ + I +G D
Sbjct: 147 CFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDN 205
Query: 528 TVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA----SGRCVT 583
+++WD+ + + GH + L++S DG Y+ S D ++ +WD+ RCV
Sbjct: 206 DIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVK 265
Query: 584 PLMGHT----SCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGT 633
G+ + ++S +GS +A+GSAD V +WD TT V K +G+
Sbjct: 266 IFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGS 319
Score = 213 (80.0 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 56/202 (27%), Positives = 96/202 (47%)
Query: 418 QGHSGPVYSASFSPLG-DFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
+GH+ V S + G + S D T++LW + A++ ++ + Y V V FN
Sbjct: 138 KGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSD 196
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS- 535
S D ++W + + + + M GH V + + +Y+ + S D +VR+WD+
Sbjct: 197 QIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRP 256
Query: 536 ---SGECVRIFIGH----RSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
CV+IF G+ +L + S DG +A+G D + +WD + R V L GH
Sbjct: 257 FAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGH 316
Query: 589 TSCVWTLAYSCEGSLLASGSAD 610
V +A+ E ++ SGS+D
Sbjct: 317 AGSVNEVAFHPEEPIVLSGSSD 338
Score = 208 (78.3 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 49/172 (28%), Positives = 89/172 (51%)
Query: 449 STKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSM-DRIQPLRIMAGHLSD 507
S+ L A ++ GH V+ +F+P G ASS +DR +W++ + + GH
Sbjct: 42 SSSLQAPIMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGA 101
Query: 508 VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMA-SGD 566
V + ++ + + + + S+DKTV +WD +GE V+ GH S + S + G +A +G
Sbjct: 102 VMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGS 161
Query: 567 EDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
+DGT+ +WD+ V +T V ++ ++ + SG D +K+WD+
Sbjct: 162 DDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDL 212
Score = 182 (69.1 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 66/261 (25%), Positives = 118/261 (45%)
Query: 345 YTFINTHNGLNCA-SISQDGSLVAGGFSDSSLKVWDMAKLGQQA---------VSS---- 390
Y + H+G + DGSL+ +D ++ VWD ++ G++ V+S
Sbjct: 92 YATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWD-SETGERVKRLKGHTSFVNSCFPA 150
Query: 391 --GLQ----GENDTTPRE-DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADT 443
G Q G +D T + DI +K S +Q ++ V S +F+ D I+S D
Sbjct: 151 RRGPQLACTGSDDGTVKLWDI----RKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDN 205
Query: 444 TIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQP----LR 499
I++W + N + +GH V + + G Y S+S D + R+W + P ++
Sbjct: 206 DIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVK 265
Query: 500 IMAG--HLSDVDCVR--WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAM 555
I G H + + +R W + + IA GS+D+ V +WD ++ V GH + +A
Sbjct: 266 IFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAF 325
Query: 556 SPDGRYMASGDEDGTIMMWDL 576
P+ + SG D + + ++
Sbjct: 326 HPEEPIVLSGSSDKRLYIGEI 346
Score = 135 (52.6 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 31/87 (35%), Positives = 44/87 (50%)
Query: 540 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRC--VTPLMGHTSCVWTLAY 597
+ + GH + P+G +AS D I+MW++ G C L GH+ V L Y
Sbjct: 49 IMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVY-GDCENYATLKGHSGAVMELHY 107
Query: 598 SCEGSLLASGSADCTVKLWDVTTSTKV 624
+ +GSLL S S D TV +WD T +V
Sbjct: 108 NTDGSLLFSASTDKTVCVWDSETGERV 134
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 286 (105.7 bits), Expect = 2.9e-24, P = 2.9e-24
Identities = 69/215 (32%), Positives = 104/215 (48%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA---NLVCYKGHNYPVWDVQ 470
+TL QGH G ++ ++ P G+ S D IR+WS N + GH + +++
Sbjct: 8 HTL-QGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIR 66
Query: 471 FNPQGHYFASSSHDRTARIWSMD--RIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
++P G Y AS+S D T IWS + + GH ++V V W + +AT S DK+
Sbjct: 67 WSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKS 126
Query: 529 VRLWDVSSG---ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW---DLASG-RC 581
V +W+V+ EC + H + + P +AS D TI M+ L S C
Sbjct: 127 VWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQLDSDWDC 186
Query: 582 VTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
L HTS VW++ + EG L S S D T+K+W
Sbjct: 187 TATLSSHTSTVWSIDFDAEGDRLVSCSDDKTLKIW 221
Score = 179 (68.1 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 43/132 (32%), Positives = 67/132 (50%)
Query: 492 MDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE-CVRIFI--GHRS 548
M R+ + GH + V WH N A+ DK +R+W +S + + GH+
Sbjct: 1 MGRLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKR 60
Query: 549 MILSLAMSPDGRYMASGDEDGTIMMWDLASGR--CVTPLMGHTSCVWTLAYSCEGSLLAS 606
I + SP G+Y+AS D T +W +SG C L GH + V ++++S G LLA+
Sbjct: 61 TIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 607 GSADCTVKLWDV 618
S D +V +W+V
Sbjct: 121 CSRDKSVWIWEV 132
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 286 (105.7 bits), Expect = 2.9e-24, P = 2.9e-24
Identities = 69/215 (32%), Positives = 104/215 (48%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA---NLVCYKGHNYPVWDVQ 470
+TL QGH G ++ ++ P G+ S D IR+WS N + GH + +++
Sbjct: 8 HTL-QGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIR 66
Query: 471 FNPQGHYFASSSHDRTARIWSMD--RIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
++P G Y AS+S D T IWS + + GH ++V V W + +AT S DK+
Sbjct: 67 WSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKS 126
Query: 529 VRLWDVSSG---ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW---DLASG-RC 581
V +W+V+ EC + H + + P +AS D TI M+ L S C
Sbjct: 127 VWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQLDSDWDC 186
Query: 582 VTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
L HTS VW++ + EG L S S D T+K+W
Sbjct: 187 TATLSSHTSTVWSIDFDAEGDRLVSCSDDKTLKIW 221
Score = 179 (68.1 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 43/132 (32%), Positives = 67/132 (50%)
Query: 492 MDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE-CVRIFI--GHRS 548
M R+ + GH + V WH N A+ DK +R+W +S + + GH+
Sbjct: 1 MGRLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKR 60
Query: 549 MILSLAMSPDGRYMASGDEDGTIMMWDLASGR--CVTPLMGHTSCVWTLAYSCEGSLLAS 606
I + SP G+Y+AS D T +W +SG C L GH + V ++++S G LLA+
Sbjct: 61 TIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 607 GSADCTVKLWDV 618
S D +V +W+V
Sbjct: 121 CSRDKSVWIWEV 132
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 311 (114.5 bits), Expect = 3.4e-24, P = 3.4e-24
Identities = 72/240 (30%), Positives = 117/240 (48%)
Query: 411 KRSYTLYQ--GHSGPVYSASFSP-LGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVW 467
KR Y L + HSG V S +L+ D + LWS + + GH PV
Sbjct: 3 KRGYKLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVD 62
Query: 468 DVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDK 527
V FN + + + ++W ++ + +R GH S+ V +H ++A+GSSD
Sbjct: 63 SVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDT 122
Query: 528 TVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMG 587
+R+WD C++ + GH I ++ SPDGR++ SG D + +WDL +G+ +
Sbjct: 123 NLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKC 182
Query: 588 HTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKST 647
H + +L + LLA+GSAD TVK WD+ T +++ T T +R++ P T
Sbjct: 183 HEGPIRSLDFHPLEFLLATGSADRTVKFWDLETF-ELIGTTRPEATG-VRAIAFHPDGQT 240
Score = 244 (91.0 bits), Expect = 6.9e-17, P = 6.9e-17
Identities = 62/243 (25%), Positives = 113/243 (46%)
Query: 351 HNG-LNCASISQDGS--LVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTP--REDII 405
H+G +NC SI + S L+ GG D + +W + K G D+ E+++
Sbjct: 14 HSGNVNCLSIGKKTSRLLLTGG-DDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVL 72
Query: 406 ----GPNGRKRSYTL--------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLN 453
+G + + L + GH + F P G+F+ S S+DT +R+W T+
Sbjct: 73 VLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKK 132
Query: 454 ANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW 513
+ YKGH + ++F+P G + S D ++W + + L H + + +
Sbjct: 133 GCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDF 192
Query: 514 HINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT-IM 572
H +ATGS+D+TV+ WD+ + E + + + ++A PDG+ + G +DG +
Sbjct: 193 HPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDGLKVY 252
Query: 573 MWD 575
W+
Sbjct: 253 SWE 255
Score = 231 (86.4 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 51/200 (25%), Positives = 94/200 (47%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH+ PV S +F+ +L+ ++ I+LW + + + + GH V+F+P G +
Sbjct: 56 GHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFL 115
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
AS S D R+W + ++ GH + + + + ++ +G D V++WD+++G+
Sbjct: 116 ASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGK 175
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS 598
+ F H I SL P +A+G D T+ WDL + + + V +A+
Sbjct: 176 LLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFH 235
Query: 599 CEGSLLASGSAD-CTVKLWD 617
+G L G D V W+
Sbjct: 236 PDGQTLFCGLDDGLKVYSWE 255
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 285 (105.4 bits), Expect = 3.7e-24, P = 3.7e-24
Identities = 67/215 (31%), Positives = 101/215 (46%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA---NLVCYKGHNYPVWDVQ 470
+TL QGH G ++ ++ P G+ S D IR+WS N + GH + ++Q
Sbjct: 8 HTL-QGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIQ 66
Query: 471 FNPQGHYFASSSHDRTARIWSMD--RIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
++P G Y AS+S D T IWS + + GH ++V V W + +AT S DK+
Sbjct: 67 WSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKS 126
Query: 529 VRLWDVSSG---ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA----SGRC 581
V +W+V+ EC + H + + P +AS D TI M+ C
Sbjct: 127 VWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKEILASASYDNTIKMYAEEPIDNDWDC 186
Query: 582 VTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
L HTS +W + + +G L S S D TVK+W
Sbjct: 187 TATLTSHTSTIWGIDFDADGERLVSCSDDTTVKIW 221
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 42/132 (31%), Positives = 67/132 (50%)
Query: 492 MDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE-CVRIFI--GHRS 548
M R+ + GH + V WH N A+ DK +R+W ++ + + GH+
Sbjct: 1 MGRLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKR 60
Query: 549 MILSLAMSPDGRYMASGDEDGTIMMWDLASGR--CVTPLMGHTSCVWTLAYSCEGSLLAS 606
I + SP G+Y+AS D T +W +SG C L GH + V ++++S G LLA+
Sbjct: 61 TIREIQWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 607 GSADCTVKLWDV 618
S D +V +W+V
Sbjct: 121 CSRDKSVWIWEV 132
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 294 (108.6 bits), Expect = 4.0e-24, P = 4.0e-24
Identities = 70/231 (30%), Positives = 109/231 (47%)
Query: 394 GENDTTPREDI-IGP---NGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWS 449
G+ TP + GP + + L GH G VY F P G + S+ D I LW+
Sbjct: 35 GQQQATPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWN 94
Query: 450 TKLNA-NLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDV 508
+ N KGH+ V ++ +N G S+S D+T +W + + ++ + GH S V
Sbjct: 95 VYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFV 154
Query: 509 D-CVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDE 567
+ C + TGS D TV+LWD+ ++ F + +L++ + + SG
Sbjct: 155 NSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGI 213
Query: 568 DGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
D I +WDL + + GH V L+ S EGS L S + D TV++WDV
Sbjct: 214 DNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 235 (87.8 bits), Expect = 8.4e-17, P = 8.4e-17
Identities = 59/224 (26%), Positives = 107/224 (47%)
Query: 413 SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPV---WDV 469
+Y +GHSG V ++ G + S+S D T+ +W ++ + KGH V +
Sbjct: 101 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 160
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
+ PQ + S D T ++W + + ++ + V V ++ + I +G D +
Sbjct: 161 RRGPQ--LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDI 217
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA----SGRCVTPL 585
++WD+ + GH + L++S +G Y+ S D T+ +WD+ RCV
Sbjct: 218 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIF 277
Query: 586 MGHT----SCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
G+ + ++S +GS +A+GSAD V +WD TTS ++L
Sbjct: 278 QGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRIL 320
Score = 206 (77.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 53/199 (26%), Positives = 92/199 (46%)
Query: 418 QGHSGPVYSASFSPLG-DFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
+GH+ V S + G + + S D T++LW + A + ++ + Y V V FN
Sbjct: 148 KGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSD 206
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS- 535
S D ++W + + + M GH V + +Y+ + + D TVR+WDV
Sbjct: 207 QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 266
Query: 536 ---SGECVRIFIGH----RSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
CV+IF G+ +L + SPDG +A+G D + +WD S R + L GH
Sbjct: 267 FAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGH 326
Query: 589 TSCVWTLAYSCEGSLLASG 607
+ +A+ + ++ +G
Sbjct: 327 AGSINEVAFHPDEPIIETG 345
Score = 171 (65.3 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 51/193 (26%), Positives = 90/193 (46%)
Query: 381 AKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSS 440
A+ G Q V +G ++ T DI +K + +Q ++ V + +F+ D I+S
Sbjct: 160 ARRGPQLVCTG--SDDGTVKLWDI----RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGG 212
Query: 441 ADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQP--- 497
D I++W + N +GH V + + +G Y S++ D T R+W + P
Sbjct: 213 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 272
Query: 498 -LRIMAG--HLSDVDCVR--WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILS 552
++I G H + + +R W + + IA GS+D+ V +WD +S + GH I
Sbjct: 273 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINE 332
Query: 553 LAMSPDGRYMASG 565
+A PD + +G
Sbjct: 333 VAFHPDEPIIETG 345
Score = 131 (51.2 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 29/87 (33%), Positives = 44/87 (50%)
Query: 540 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRC--VTPLMGHTSCVWTLAY 597
+ + GH + P+G +AS D I++W++ G C L GH+ V L Y
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 117
Query: 598 SCEGSLLASGSADCTVKLWDVTTSTKV 624
+ +GS+L S S D TV +WD T +V
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERV 144
>UNIPROTKB|B4MY77 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7260 "Drosophila willistoni"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 OMA:SWKCVCT OrthoDB:EOG45DV4X EMBL:CH963894
RefSeq:XP_002066080.1 ProteinModelPortal:B4MY77 STRING:B4MY77
EnsemblMetazoa:FBtr0252775 GeneID:6643305 KEGG:dwi:Dwil_GK22124
FlyBase:FBgn0224109 InParanoid:B4MY77 Uniprot:B4MY77
Length = 335
Score = 284 (105.0 bits), Expect = 4.8e-24, P = 4.8e-24
Identities = 68/215 (31%), Positives = 105/215 (48%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA---NLVCYKGHNYPVWDVQ 470
+TL QGH G ++ ++ P G+ S D IR+WS N+ + GH + +++
Sbjct: 8 HTL-QGHKGRIWGVAWHPKGNTFASCGEDKAIRIWSLSGNSWSTKTILSDGHKRTIREIR 66
Query: 471 FNPQGHYFASSSHDRTARIWSMD--RIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
++P G Y AS+S D T IWS + + GH ++V V W + +AT S DK+
Sbjct: 67 WSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSKSGGLLATCSRDKS 126
Query: 529 VRLWDVSSG---ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWD---LASG-RC 581
V +W+V+ EC + H + + P +AS D TI M+ L S C
Sbjct: 127 VWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKEILASASYDNTIKMFAESALDSDWDC 186
Query: 582 VTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
L HTS VW++ + +G L S S D T+K+W
Sbjct: 187 TATLSSHTSTVWSIDFDADGERLVSCSDDTTLKIW 221
Score = 180 (68.4 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 43/132 (32%), Positives = 67/132 (50%)
Query: 492 MDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE-CVRIFI--GHRS 548
M R+ + GH + V WH N A+ DK +R+W +S + + GH+
Sbjct: 1 MGRLILEHTLQGHKGRIWGVAWHPKGNTFASCGEDKAIRIWSLSGNSWSTKTILSDGHKR 60
Query: 549 MILSLAMSPDGRYMASGDEDGTIMMWDLASGR--CVTPLMGHTSCVWTLAYSCEGSLLAS 606
I + SP G+Y+AS D T +W +SG C L GH + V ++++S G LLA+
Sbjct: 61 TIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSKSGGLLAT 120
Query: 607 GSADCTVKLWDV 618
S D +V +W+V
Sbjct: 121 CSRDKSVWIWEV 132
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 296 (109.3 bits), Expect = 5.3e-24, Sum P(2) = 5.3e-24
Identities = 65/219 (29%), Positives = 108/219 (49%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQ 474
TL Q H GP+++ ++ G+FILS+ D T +W + H+ P DV +
Sbjct: 261 TLGQ-HKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-S 318
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDV 534
+ FAS S D + + + +P++ GH ++V+ ++W N +A+ S D T+++W +
Sbjct: 319 NNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM 378
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGR---------YMASGDEDGTIMMWDLASGRCVTPL 585
CV H I ++ SP G +AS D T+ +WD+ G C+ L
Sbjct: 379 KQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTL 438
Query: 586 MGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
H V+++A+S +G LASGS D V +W+ T V
Sbjct: 439 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALV 477
Score = 257 (95.5 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 60/208 (28%), Positives = 103/208 (49%)
Query: 420 HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFA 479
HS P + F S S D I + + + ++GH V ++++P G+ A
Sbjct: 307 HSAPALDVDWQSNNTFA-SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLA 365
Query: 480 SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW--------HINCNY-IATGSSDKTVR 530
S S D T +IWSM + + + H ++ ++W + N N +A+ S D TVR
Sbjct: 366 SCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVR 425
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
LWDV G C+ H+ + S+A SPDGRY+ASG D + +W+ +G V G T
Sbjct: 426 LWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TG 484
Query: 591 CVWTLAYSCEGSLLASGSADCTVKLWDV 618
++ + ++ G + + ++D +V + D+
Sbjct: 485 GIFEVCWNAAGDKVGASASDGSVCVLDL 512
Score = 239 (89.2 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 67/241 (27%), Positives = 114/241 (47%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLW-----STKLNANLV---CYK--GHNYP-- 465
+GH V+ +++P+ D + S S D+T R+W ST + LV C + G + P
Sbjct: 166 RGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSN 225
Query: 466 --VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATG 523
V + +N +G A+ S+D ARIW+ D + H + ++W+ N+I +
Sbjct: 226 KDVTSLDWNSEGTLLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKKGNFILSA 284
Query: 524 SSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVT 583
DKT +WD +GE + F H + L + + + AS D I + L R +
Sbjct: 285 GVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPIK 343
Query: 584 PLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLP 643
GHT+ V + + G+LLAS S D T+K+W + V + ++ + ++K P
Sbjct: 344 TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCV--HDLQAHNKEIYTIKWSP 401
Query: 644 T 644
T
Sbjct: 402 T 402
Score = 222 (83.2 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 67/264 (25%), Positives = 119/264 (45%)
Query: 365 LVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPV 424
L+A G DS+ ++W++++ + G R I R+ + V
Sbjct: 183 LLASGSGDSTARIWNLSE-------NSTSGSTQLVLRHCI-----REGGQDVPSNKD--V 228
Query: 425 YSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKG-HNYPVWDVQFNPQGHYFASSSH 483
S ++ G + + S D R+W TK + NL G H P++ +++N +G++ S+
Sbjct: 229 TSLDWNSEGTLLATGSYDGFARIW-TK-DGNLASTLGQHKGPIFALKWNKKGNFILSAGV 286
Query: 484 DRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIF 543
D+T IW + + H + V W N N A+ S+D + + + ++ F
Sbjct: 287 DKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSN-NTFASCSTDMCIHVCKLGQDRPIKTF 345
Query: 544 IGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS- 602
GH + + ++ P G +AS +D T+ +W + CV L H ++T+ +S G
Sbjct: 346 QGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPG 405
Query: 603 --------LLASGSADCTVKLWDV 618
+LAS S D TV+LWDV
Sbjct: 406 TNNPNANLMLASASFDSTVRLWDV 429
Score = 204 (76.9 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 48/177 (27%), Positives = 87/177 (49%)
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
G+ R +QGH+ V + + P G+ + S S D T+++WS K + + + HN ++
Sbjct: 337 GQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYT 396
Query: 469 VQFNPQGH---------YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
++++P G AS+S D T R+W +DR + + H V V + + Y
Sbjct: 397 IKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRY 456
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
+A+GS DK V +W+ +G V + G I + + G + + DG++ + DL
Sbjct: 457 LASGSFDKCVHIWNTQTGALVHSYRGTGG-IFEVCWNAAGDKVGASASDGSVCVLDL 512
Score = 143 (55.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 49/202 (24%), Positives = 83/202 (41%)
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQP---LRIMAGHL-------- 505
V +GH V+ +NP AS S D TARIW++ +++ H
Sbjct: 163 VVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDV 222
Query: 506 ---SDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYM 562
DV + W+ +ATGS D R+W G H+ I +L + G ++
Sbjct: 223 PSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKGNFI 281
Query: 563 ASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTST 622
S D T ++WD +G H++ + + + AS S D + + +
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQD- 339
Query: 623 KVLKTEEKSGTNRLRSLKTLPT 644
+ +KT + TN + ++K PT
Sbjct: 340 RPIKTFQ-GHTNEVNAIKWDPT 360
Score = 116 (45.9 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 54/240 (22%), Positives = 99/240 (41%)
Query: 360 SQDGSLVAGGFSDSSLKVW----DMAK-LGQQ-----AVSSGLQGE---NDTTPREDIIG 406
+ +G+L+A G D ++W ++A LGQ A+ +G + + II
Sbjct: 234 NSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIW 293
Query: 407 PNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPV 466
+ + HS P + F S S D I + + + ++GH V
Sbjct: 294 DAHTGEAKQQFPFHSAPALDVDWQSNNTFA-SCSTDMCIHVCKLGQDRPIKTFQGHTNEV 352
Query: 467 WDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSD 526
++++P G+ AS S D T +IWSM + + + H ++ ++W + T + +
Sbjct: 353 NAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKW--SPTGPGTNNPN 410
Query: 527 KTVRLWDVSSGECVRIFIGHRSMIL-SLAMSPDGRYMASGDEDGTIMMWDLASG---RCV 582
+ L S VR++ R + + +L + Y + DG LASG +CV
Sbjct: 411 ANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRY----LASGSFDKCV 466
Score = 49 (22.3 bits), Expect = 5.3e-24, Sum P(2) = 5.3e-24
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 2 DELQVVEFVATYLKKKGFSEAENALQAEIQRNKSSNNTN 40
DE +++ F TYL GFS + A I+ + S +N N
Sbjct: 6 DEYEILNF--TYLSLSGFSHS--AFTFGIESHISQSNIN 40
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 309 (113.8 bits), Expect = 5.7e-24, Sum P(2) = 5.7e-24
Identities = 66/212 (31%), Positives = 115/212 (54%)
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
G +S + +GH V + G+ I+S S D T+++WS L GH VW
Sbjct: 373 GELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 431
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
Q + + S S DRT ++W+ + + + + GH S V C+ H++ + +GS D T
Sbjct: 432 SQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM--HLHEKRVVSGSRDAT 487
Query: 529 VRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
+R+WD+ +G+C+ + +GH + + + DGR + SG D + +WD + C+ L GH
Sbjct: 488 LRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGH 545
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
T+ V++L + +G + SGS D ++++WDV T
Sbjct: 546 TNRVYSLQF--DGIHVVSGSLDTSIRVWDVET 575
Score = 272 (100.8 bits), Expect = 8.3e-20, Sum P(2) = 8.3e-20
Identities = 79/299 (26%), Positives = 140/299 (46%)
Query: 363 GSLVAGGFSDSSLKVWDMAKLGQ--QAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGH 420
G+ + G D++LKVW A G+ + + G + R++II R+ ++
Sbjct: 396 GNRIVSGSDDNTLKVWS-AVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAE 454
Query: 421 SGPVYSASFSPLGDF---------ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
+G + ++S S D T+R+W + L GH V VQ+
Sbjct: 455 TGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 514
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+ G S ++D ++W + L + GH + V +++ + ++ +GS D ++R+
Sbjct: 515 D--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRV 570
Query: 532 WDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMG---H 588
WDV +G C+ GH+S L+ M + SG+ D T+ +WD+ +G+C+ L G H
Sbjct: 571 WDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKH 628
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV--LKTEEKSGTN----RLRSLKT 641
S V L ++ + + + S D TVKLWD+ T + L T E G+ R+R+ T
Sbjct: 629 QSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT 685
Score = 43 (20.2 bits), Expect = 5.7e-24, Sum P(2) = 5.7e-24
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 234 DSLENRLEKTG--LISDSEKAEGENKEAEIDE 263
DS + LE+ IS E + G +E E DE
Sbjct: 76 DSQQGHLEENNNRFISVDEDSSGNQEEQEEDE 107
Score = 38 (18.4 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 47 DPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSS--LDLYKHELLHVLY 94
+ E+ + F +S+D +R +D+++ S T S+ +DL H+L Y
Sbjct: 120 EEEMDQESDDFDQSDDS-SR-EDDHTHSNSVTNSTSIVDLPIHQLSSPFY 167
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 283 (104.7 bits), Expect = 6.2e-24, P = 6.2e-24
Identities = 54/178 (30%), Positives = 93/178 (52%)
Query: 433 GDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSM 492
G + + D + LWS ++ GH PV V+ N + S + R+W +
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 493 DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILS 552
+ + LR + GH +++ + +H ++A+GS D ++LWD+ CV + GH +
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 553 LAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSAD 610
L SPDG+++AS +D T+ +WDL +G+ ++ GHT V + + LLASGS+D
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 260 (96.6 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 51/145 (35%), Positives = 80/145 (55%)
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDV 534
G A+ D +WS+++ + + GH S V+ VR + I GS ++R+WD+
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ + +R +GH++ I SL P G ++ASG +D I +WD+ CV GH+ V
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 595 LAYSCEGSLLASGSADCTVKLWDVT 619
L +S +G LAS + D TVKLWD+T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLT 177
Score = 209 (78.6 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 52/178 (29%), Positives = 86/178 (48%)
Query: 363 GSLVAGGFSDSSLKVWDMAK----LGQQAVSSGLQGENDTTPREDIIG--PNGRKRSYTL 416
G L+A G D + +W + K + +S ++ TP E I+ +G R + L
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 417 --------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
GH + S F P G+F+ S S DT I+LW + + Y+GH+ V
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSD 526
++F+P G + AS++ D T ++W + + + GH V+ V +H N +A+GSSD
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 208 (78.3 bits), Expect = 7.5e-16, P = 7.5e-16
Identities = 43/150 (28%), Positives = 76/150 (50%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH+ PV S + + I++ S +IR+W + L GH + + F+P G +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
AS S D ++W + R + GH V C+R+ + ++A+ + D TV+LWD+++G+
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDED 568
+ F GH + + P+ +ASG D
Sbjct: 181 MMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 301 (111.0 bits), Expect = 6.2e-24, P = 6.2e-24
Identities = 94/346 (27%), Positives = 153/346 (44%)
Query: 305 PRVKPDLALP--VMPTEVEQSILEDLRNRVHLSSAALPSVSFYTFINTHNGLNC-ASISQ 361
PR + A+P + PTE + +L R+ P + L C A + Q
Sbjct: 9 PRTGAESAVPQSMEPTEDVERLLIQFRDEAG-EPLGSPFDVPVSITPDKLQLVCNALLQQ 67
Query: 362 DGSL-VAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGH 420
D + +A F D+ + V L QAV + + P+ + R + +GH
Sbjct: 68 DEPVPLAFFFHDAEIVVSLEKTLAGQAVETEKVLDIIYQPQA-VFRVRAVTRCTSSLEGH 126
Query: 421 SGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFAS 480
+ V S +FSP G ++ S S DTT+R W KGH + V + ++P G AS
Sbjct: 127 TEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKLAS 186
Query: 481 SSHDRTARIWSMDRIQPL-RIMAGHLSDVDCVRW---HIN--CNYIATGSSDKTVRLWDV 534
+ +W + R++ GH + C+ W HIN C Y+A+ S D ++R+WD
Sbjct: 187 GCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDT 246
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
G C +I GH + + DG + S +D TI +W G L GH V T
Sbjct: 247 LMGRCDKILTGHTQSVTCVKWGGDG-LLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNT 305
Query: 595 LAYSCEGSLLASGS---ADCTVKLWDVTTSTKVLKTEEKSGTNRLR 637
+A S + +L +G+ A+ T+ D++ S LK + + +++R
Sbjct: 306 MALSTD-YVLRTGAFEPAEATINPQDMSGSLAELKDKAQQRYDKVR 350
Score = 209 (78.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 59/206 (28%), Positives = 102/206 (49%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSA----DTTIRLWSTKLNANLVCYKGHNYPVWDVQFNP 473
QGH+ V + + S D++L + A + TI ++ +L K +D +
Sbjct: 297 QGHAHWVNTMALST--DYVLRTGAFEPAEATIN--PQDMSGSLAELKDKAQQRYD-KVRG 351
Query: 474 QG-HYFASSSHDRTARIW--SMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVR 530
QG S S D T +W + D+ +PL M GH + ++ V + + IA+ S DK+++
Sbjct: 352 QGPERLVSGSDDFTLFLWRPAEDK-KPLERMTGHQALINQVLFSPDTRIIASASFDKSIK 410
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
LW+ +G+ + GH S + +A S D R + SG D T+ +WD + + L GH
Sbjct: 411 LWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHAD 470
Query: 591 CVWTLAYSCEGSLLASGSADCTVKLW 616
V+ +S +G +ASG D +++W
Sbjct: 471 EVFATDWSPDGQRVASGGKDKCLRIW 496
Score = 209 (78.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 62/207 (29%), Positives = 100/207 (48%)
Query: 419 GHSGPVYSASFSPLGDFIL-SSSADTTIRLWSTKLNANLVC--YKGHNYPVWDVQFNPQG 475
GH+ V + GD +L SSS D TI++W ++ ++C +GH + V + +
Sbjct: 257 GHTQSVTCVKWG--GDGLLYSSSQDRTIKVWRSQ--DGILCRTLQGHAHWVNTMALSTDY 312
Query: 476 HYFASSSHDRTARIWSMDRIQPLRIMAGHLSD-VDCVRWHINCNYIATGSSDKTVRLW-D 533
+ A I D L + D VR + +GS D T+ LW
Sbjct: 313 VLRTGAFEPAEATINPQDMSGSLAELKDKAQQRYDKVRGQ-GPERLVSGSDDFTLFLWRP 371
Query: 534 VSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVW 593
+ + GH+++I + SPD R +AS D +I +W+ +G+ +T L GH S V+
Sbjct: 372 AEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVY 431
Query: 594 TLAYSCEGSLLASGSADCTVKLWDVTT 620
+A+S + LL SGS+D T+K+WD T
Sbjct: 432 QIAWSADSRLLVSGSSDSTLKVWDAET 458
Score = 180 (68.4 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 69/244 (28%), Positives = 106/244 (43%)
Query: 394 GENDTTPRE-DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
G DTT R D+ + +T +GH V S ++SP G + S ++ I LW
Sbjct: 145 GSGDTTVRFWDL---STETPQFTA-KGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPAT 200
Query: 453 NANLV-CYKGHNYPV----WD-VQFNPQGHYFASSSHDRTARIWS--MDRIQPLRIMAGH 504
+ GH+ + W+ + NP+ Y AS+S D + RIW M R +I+ GH
Sbjct: 201 GNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCD--KILTGH 258
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDG--RYM 562
V CV+W + + + S D+T+++W G R GH + ++A+S D R
Sbjct: 259 TQSVTCVKWGGD-GLLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTDYVLRTG 317
Query: 563 ASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTST 622
A + TI D+ SG + L + L SGS D T+ LW
Sbjct: 318 AFEPAEATINPQDM-SGS-LAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWRPAEDK 375
Query: 623 KVLK 626
K L+
Sbjct: 376 KPLE 379
Score = 156 (60.0 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 47/178 (26%), Positives = 78/178 (43%)
Query: 357 ASIS-QDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYT 415
A+I+ QD S D + + +D K+ Q + G +D T + P K+
Sbjct: 324 ATINPQDMSGSLAELKDKAQQRYD--KVRGQGPERLVSGSDDFTLF--LWRPAEDKKPLE 379
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQG 475
GH + FSP I S+S D +I+LW + L +GH V+ + ++
Sbjct: 380 RMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADS 439
Query: 476 HYFASSSHDRTARIWSMDRIQPLRI-MAGHLSDVDCVRWHINCNYIATGSSDKTVRLW 532
S S D T ++W + + L I + GH +V W + +A+G DK +R+W
Sbjct: 440 RLLVSGSSDSTLKVWDAET-KKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIW 496
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 300 (110.7 bits), Expect = 7.0e-24, P = 7.0e-24
Identities = 74/229 (32%), Positives = 109/229 (47%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA-NLVCYKGHNYPVWDVQFNPQGH 476
+GHS V S +FSP G ++ S S DTT+R W + C KGH + V + ++P G
Sbjct: 111 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC-KGHRHWVLSISWSPDGR 169
Query: 477 YFASSSHDRTARIWSMDRIQPL-RIMAGHLSDVDCVRW---HIN--CNYIATGSSDKTVR 530
AS + +W + + R +AGH + + W H N C Y+A+ S D +VR
Sbjct: 170 KLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVR 229
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
+WD ++G C RI GH + L DG + S +D TI +W G L GH
Sbjct: 230 IWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGH 288
Query: 591 CVWTLAYSCEGSLLASG--SADCTVKLWDVTTSTKVLKTEEKSGTNRLR 637
V T+A S + +L A+ +V D+ S + LK S N +R
Sbjct: 289 WVNTMALSTDYALRTGAFEPAEASVNPQDLQGSLQELKERALSRYNLVR 337
Score = 216 (81.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 65/267 (24%), Positives = 128/267 (47%)
Query: 366 VAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPR---EDIIGPNGRKRSYTLYQGHSG 422
VA D S+++WD + + +G ++ T R + ++ + R+ +++ H G
Sbjct: 219 VASSSKDGSVRIWDTTAGRCERILTG-HTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG 277
Query: 423 PVYSASFSPLGDFI--LSSSADTTIRLWS---TKLNANLVCYKGHNYPVWD---VQFN-- 472
V + G ++ ++ S D +R + + + N +G + + ++N
Sbjct: 278 -VLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQGSLQELKERALSRYNLV 336
Query: 473 -PQG-HYFASSSHDRTARIWS-MDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
QG S S D T +WS + +PL M GH + ++ V + + +A+ S DK++
Sbjct: 337 RGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSI 396
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
+LWD +G+ + GH + + +A S D R + SG D T+ +WD+ + + L GH
Sbjct: 397 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHA 456
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLW 616
V+ + +S +G +ASG D +++W
Sbjct: 457 DEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 212 (79.7 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 63/214 (29%), Positives = 107/214 (50%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFIL-SSSADTTIRLWSTKLNANLVC--YKGHNYPVWD 468
R + GH+ V + GD +L S+S D TI++W + + ++C +GH + V
Sbjct: 237 RCERILTGHTQSVTCLRWG--GDGLLYSASQDRTIKVW--RAHDGVLCRTLQGHGHWVNT 292
Query: 469 VQFNPQGHYFASSSHDRTARIWSMD---RIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
+ + + A + D +Q L+ A LS + VR + +GS
Sbjct: 293 MALSTDYALRTGAFEPAEASVNPQDLQGSLQELKERA--LSRYNLVRGQ-GPERLVSGSD 349
Query: 526 DKTVRLWDVSSGEC-VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTP 584
D T+ LW + + + GH+++I + SPD R +AS D +I +WD +G+ +
Sbjct: 350 DFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLAS 409
Query: 585 LMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
L GH + V+ +A+S + LL SGS+D T+K+WDV
Sbjct: 410 LRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV 443
Score = 203 (76.5 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 47/125 (37%), Positives = 73/125 (58%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
+ GH V V + Y+A+GS D TVR WD+S+ GHR +LS++ SPDGR
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGR 169
Query: 561 YMASGDEDGTIMMWDLASGRCV-TPLMGHTSCVWTLAY-----SCEGSLLASGSADCTVK 614
+ASG ++G I++WD ++G+ V L GH+ + L++ + E +AS S D +V+
Sbjct: 170 KLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVR 229
Query: 615 LWDVT 619
+WD T
Sbjct: 230 IWDTT 234
Score = 189 (71.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 66/241 (27%), Positives = 100/241 (41%)
Query: 394 GENDTTPRE-DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
G DTT R D+ + + +GH V S S+SP G + S + I LW
Sbjct: 132 GSGDTTVRFWDL----STETPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPST 187
Query: 453 NANLV-CYKGHNYPV----WD-VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLS 506
+ GH+ + W+ + NP+ Y ASSS D + RIW + RI+ GH
Sbjct: 188 GKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQ 247
Query: 507 DVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGD 566
V C+RW + + + S D+T+++W G R GH + ++A+S D
Sbjct: 248 SVTCLRWGGD-GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAF 306
Query: 567 E--DGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
E + ++ DL + L + L L SGS D T+ LW K
Sbjct: 307 EPAEASVNPQDLQGS--LQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKP 364
Query: 625 L 625
L
Sbjct: 365 L 365
Score = 160 (61.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 57/223 (25%), Positives = 105/223 (47%)
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGD-----FILSSSADTTIRLWSTKLNANLVCYKGHN 463
G++ TL GHS + S+ PL ++ SSS D ++R+W T GH
Sbjct: 188 GKQVGRTL-AGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHT 246
Query: 464 YPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY-IAT 522
V +++ G + S+S DRT ++W R + GH V+ + ++ +Y + T
Sbjct: 247 QSVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMA--LSTDYALRT 303
Query: 523 GS---SDKTVRLWDVSSGECVRIFIGHRSMI-LSLAMSPDGRYMASGDEDGTIMMWDLAS 578
G+ ++ +V D+ G + R++ +L + SG +D T+ +W A
Sbjct: 304 GAFEPAEASVNPQDLQ-GSLQEL--KERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAE 360
Query: 579 GRC-VTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+ +T + GH + + + +S + ++AS S D ++KLWD T
Sbjct: 361 DKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT 403
Score = 158 (60.7 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 32/89 (35%), Positives = 50/89 (56%)
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS 598
C GH ++S+A SP G+Y+ASG D T+ WDL++ GH V ++++S
Sbjct: 106 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWS 165
Query: 599 CEGSLLASGSADCTVKLWDVTTSTKVLKT 627
+G LASG + + LWD +T +V +T
Sbjct: 166 PDGRKLASGCKNGQILLWDPSTGKQVGRT 194
Score = 47 (21.6 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMA 381
+ S G +A G D++++ WD++
Sbjct: 121 AFSPTGKYLASGSGDTTVRFWDLS 144
Score = 44 (20.5 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGEN 396
S S DG +A G + + +WD + G+Q V L G +
Sbjct: 163 SWSPDGRKLASGCKNGQILLWDPST-GKQ-VGRTLAGHS 199
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 287 (106.1 bits), Expect = 7.1e-22, P = 7.1e-22
Identities = 66/226 (29%), Positives = 110/226 (48%)
Query: 408 NGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVW 467
+GR S TL Q H GP+++ ++ G++ILS+ D T +W + H+ P
Sbjct: 440 DGRLAS-TLGQ-HKGPIFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPAL 497
Query: 468 DVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDK 527
DV + FAS S D+ + + +P++ GH ++V+ ++W +A+ S D
Sbjct: 498 DVDWQTN-QAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDM 556
Query: 528 TVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR---------YMASGDEDGTIMMWDLAS 578
T+++W ++ C H I ++ SP G +AS D T+ +WD+
Sbjct: 557 TLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVER 616
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
G C+ L HT V+++A+S +G LASGS D V +W T V
Sbjct: 617 GSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIWSTQTGQLV 662
Score = 269 (99.8 bits), Expect = 8.8e-24, Sum P(2) = 8.8e-24
Identities = 63/208 (30%), Positives = 105/208 (50%)
Query: 420 HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFA 479
HS P + F S S D I + +N + +KGH V +++ PQG A
Sbjct: 492 HSAPALDVDWQTNQAFA-SCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLA 550
Query: 480 SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW--------HINCNYI-ATGSSDKTVR 530
S S D T +IWSM+R + + H ++ ++W + N N I A+ S D TVR
Sbjct: 551 SCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVR 610
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
LWDV G C+ H + S+A SPDG+++ASG D + +W +G+ V G T
Sbjct: 611 LWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIWSTQTGQLVHSYKG-TG 669
Query: 591 CVWTLAYSCEGSLLASGSADCTVKLWDV 618
++ + ++ +G+ + + ++D +V + D+
Sbjct: 670 GIFEVCWNSKGTKVGASASDGSVFVLDL 697
Score = 174 (66.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 79/311 (25%), Positives = 129/311 (41%)
Query: 352 NGLNCASISQ--DGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT-TPREDIIGPN 408
N +S+ Q G AGG +S D A G + ++G + + T R G N
Sbjct: 244 NSSTSSSVEQPTSGLTPAGGTVSTSNP--DAAASGGASTATGSKAPSGAVTIRVGAQGNN 301
Query: 409 GRKRSYTLYQGH-SGPVYSASFSPLGD--FILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
+ S SG + S++ G ++ D I + +K A ++ +GH
Sbjct: 302 VQSGSSNAQSSAPSGTISSSTSGGAGTPAALVPMDIDENIEIPESK--ARVL--RGHESE 357
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQP------LR--IMAGHLS-----DVDCVR 512
V+ +NP AS S D TARIW M LR I G DV +
Sbjct: 358 VFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVPSNKDVTSLD 417
Query: 513 WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIM 572
W+ + + +ATGS D R+W + G H+ I +L + G Y+ S D T +
Sbjct: 418 WNCDGSLLATGSYDGYARIWK-TDGRLASTLGQHKGPIFALKWNKCGNYILSAGVDKTTI 476
Query: 573 MWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
+WD ++G+C H++ + + + AS S D + + + + + KT K
Sbjct: 477 IWDASTGQCTQQFAFHSAPALDVDWQTNQAF-ASCSTDQRIHVCRLGVNEPI-KTF-KGH 533
Query: 633 TNRLRSLKTLP 643
TN + ++K P
Sbjct: 534 TNEVNAIKWCP 544
Score = 84 (34.6 bits), Expect = 8.8e-24, Sum P(2) = 8.8e-24
Identities = 66/287 (22%), Positives = 101/287 (35%)
Query: 187 NERINFQVSPGQPSSISDDAEIVTLIGSNQDAANQINQKEVHWGLLEDSLENRLEKTGLI 246
N + ++ PG + ++ A + GS + +Q DS N G
Sbjct: 119 NAKPEIKIEPG--TGVAGSAGGNKIAGSTTGTSTPTDQSASE----VDSSGNAANNAGGT 172
Query: 247 SDSEKAEGENKEAEIDENKKRPVEGGK---QGASIKKLKKDKAINATAKTSRLEANTVST 303
G N+ + N GG GAS KK + +++ + AN ST
Sbjct: 173 YAGNNGAGGNQASTGGSNSTSTPAGGDLAAPGASQKKSQNSNEAGSSSSGNAGNANATST 232
Query: 304 APRVKPDLALPVMPTE--VEQ--SILEDLRNRVHLSS---AALPSVSFYTFINTHNGLNC 356
T VEQ S L V S+ AA S T +G
Sbjct: 233 DDAASSTSTNGNSSTSSSVEQPTSGLTPAGGTVSTSNPDAAASGGASTATGSKAPSGAVT 292
Query: 357 ASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT----TPR---EDIIGPNG 409
+ G+ V G S++ A G +SS G T P E+I P
Sbjct: 293 IRVGAQGNNVQSGSSNAQ----SSAPSG--TISSSTSGGAGTPAALVPMDIDENIEIPES 346
Query: 410 RKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWS-TKLNAN 455
+ R + +GH V+ +++P D + S S D+T R+W + N N
Sbjct: 347 KAR---VLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTN 390
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 299 (110.3 bits), Expect = 9.0e-24, P = 9.0e-24
Identities = 73/229 (31%), Positives = 109/229 (47%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA-NLVCYKGHNYPVWDVQFNPQGH 476
+GHS V S +FSP G ++ S S DTT+R W + C +GH + V + ++P G
Sbjct: 111 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC-QGHRHWVLSISWSPDGK 169
Query: 477 YFASSSHDRTARIWSMDRIQPL-RIMAGHLSDVDCVRW---HIN--CNYIATGSSDKTVR 530
AS + +W + + R +AGH + + W H N C Y+A+ S D +VR
Sbjct: 170 KLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVR 229
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
+WD ++G C RI GH + L DG + S +D TI +W G L GH
Sbjct: 230 VWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGH 288
Query: 591 CVWTLAYSCEGSLLASG--SADCTVKLWDVTTSTKVLKTEEKSGTNRLR 637
V T+A S + +L A+ +V D+ S + LK S N +R
Sbjct: 289 WVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVR 337
Score = 265 (98.3 bits), Expect = 6.8e-20, P = 6.8e-20
Identities = 66/189 (34%), Positives = 96/189 (50%)
Query: 434 DFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMD 493
D I A +R T+ ++L +GH+ V V F+P G Y AS S D T R W +
Sbjct: 89 DIIYQPQAVFRVRA-VTRCTSSL---EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLS 144
Query: 494 RIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECV-RIFIGHRSMILS 552
P GH V + W + +A+G + + LWD S+G+ V R GH I +
Sbjct: 145 TETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITA 204
Query: 553 LAM-----SPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASG 607
L+ +P+ RY+AS +DG++ +WD +GRC L GHT V L + +G LL S
Sbjct: 205 LSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSA 263
Query: 608 SADCTVKLW 616
S D T+K+W
Sbjct: 264 SQDRTIKVW 272
Score = 218 (81.8 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 66/267 (24%), Positives = 128/267 (47%)
Query: 366 VAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPR---EDIIGPNGRKRSYTLYQGHSG 422
VA D S++VWD + + +G ++ T R + ++ + R+ +++ H G
Sbjct: 219 VASSSKDGSVRVWDTTAGRCERILTG-HTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG 277
Query: 423 PVYSASFSPLGDFI--LSSSADTTIRLWS---TKLNANLVCYKGHNYPVWD---VQFN-P 473
V + G ++ ++ S D +R + + + N +G + + ++N
Sbjct: 278 -VLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLV 336
Query: 474 QGH---YFASSSHDRTARIWS-MDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
+G S S D T +WS + +PL M GH + ++ V + + IA+ S DK++
Sbjct: 337 RGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSI 396
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
+LWD +G+ + GH + + +A S D R + SG D T+ +WD+ + + L GH
Sbjct: 397 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHA 456
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLW 616
V+ + +S +G +ASG D +++W
Sbjct: 457 DEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 216 (81.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 63/214 (29%), Positives = 108/214 (50%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFIL-SSSADTTIRLWSTKLNANLVC--YKGHNYPVWD 468
R + GH+ V + GD +L S+S D TI++W + + ++C +GH + V
Sbjct: 237 RCERILTGHTQSVTCLRWG--GDGLLYSASQDRTIKVW--RAHDGVLCRTLQGHGHWVNT 292
Query: 469 VQFNPQGHYFASSSHDRTARIWSMD---RIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
+ + + A + + D +Q L+ A LS + VR + +GS
Sbjct: 293 MALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERA--LSRYNLVRGR-GLERLVSGSD 349
Query: 526 DKTVRLWDVSSGEC-VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTP 584
D T+ LW + + + GH+++I + SPD R +AS D +I +WD +G+ +
Sbjct: 350 DFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLAS 409
Query: 585 LMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
L GH + V+ +A+S + LL SGS+D T+K+WDV
Sbjct: 410 LRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV 443
Score = 201 (75.8 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 46/125 (36%), Positives = 73/125 (58%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
+ GH V V + Y+A+GS D TVR WD+S+ GHR +LS++ SPDG+
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 169
Query: 561 YMASGDEDGTIMMWDLASGRCV-TPLMGHTSCVWTLAY-----SCEGSLLASGSADCTVK 614
+ASG ++G I++WD ++G+ V L GH+ + L++ + E +AS S D +V+
Sbjct: 170 KLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVR 229
Query: 615 LWDVT 619
+WD T
Sbjct: 230 VWDTT 234
Score = 193 (73.0 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 66/241 (27%), Positives = 100/241 (41%)
Query: 394 GENDTTPRE-DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
G DTT R D+ + + QGH V S S+SP G + S + I LW
Sbjct: 132 GSGDTTVRFWDL----STETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPST 187
Query: 453 NANLV-CYKGHNYPV----WD-VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLS 506
+ GH+ + W+ + NP+ Y ASSS D + R+W + RI+ GH
Sbjct: 188 GKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQ 247
Query: 507 DVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGD 566
V C+RW + + + S D+T+++W G R GH + ++A+S D
Sbjct: 248 SVTCLRWGGD-GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAF 306
Query: 567 E--DGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
E + ++ DL + L + L L SGS D T+ LW K
Sbjct: 307 EPAEASVNAQDLRGS--LQELKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKP 364
Query: 625 L 625
L
Sbjct: 365 L 365
Score = 157 (60.3 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS 598
C GH ++S+A SP G+Y+ASG D T+ WDL++ GH V ++++S
Sbjct: 106 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWS 165
Query: 599 CEGSLLASGSADCTVKLWDVTTSTKV 624
+G LASG + + LWD +T +V
Sbjct: 166 PDGKKLASGCKNGQILLWDPSTGKQV 191
Score = 152 (58.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 55/225 (24%), Positives = 104/225 (46%)
Query: 407 PNGRKRSYTLYQGHSGPVYSASFSPLGD-----FILSSSADTTIRLWSTKLNANLVCYKG 461
P+ K+ GHS + + S+ PL ++ SSS D ++R+W T G
Sbjct: 185 PSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTG 244
Query: 462 HNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY-I 520
H V +++ G + S+S DRT ++W R + GH V+ + ++ +Y +
Sbjct: 245 HTQSVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMA--LSTDYAL 301
Query: 521 ATGS---SDKTVRLWDVSSGECVRIFIGHRSMI-LSLAMSPDGRYMASGDEDGTIMMWDL 576
TG+ ++ +V D+ G + R++ +L + SG +D T+ +W
Sbjct: 302 RTGAFEPAEASVNAQDLR-GSLQEL--KERALSRYNLVRGRGLERLVSGSDDFTLFLWSP 358
Query: 577 ASGRC-VTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
A + + + GH + + + +S + ++AS S D ++KLWD T
Sbjct: 359 AEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT 403
Score = 47 (21.6 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMA 381
+ S G +A G D++++ WD++
Sbjct: 121 AFSPTGKYLASGSGDTTVRFWDLS 144
Score = 47 (21.6 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGEN 396
S S DG +A G + + +WD + G+Q V L G +
Sbjct: 163 SWSPDGKKLASGCKNGQILLWDPST-GKQ-VGRALAGHS 199
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 302 (111.4 bits), Expect = 9.0e-24, P = 9.0e-24
Identities = 69/205 (33%), Positives = 107/205 (52%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNP 473
+TL +GHS V S FS +L+S++D+T+++W T + +GH V V F+
Sbjct: 332 HTL-EGHSDLVRSVIFSH-DSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSH 389
Query: 474 QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
AS+S D T +IW + GH V V + + +A+ S D TV++WD
Sbjct: 390 DSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWD 449
Query: 534 VSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVW 593
+G GHR + S+ S D R +AS +D T+ +WD G L GH+S V
Sbjct: 450 TGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVT 509
Query: 594 TLAYSCEGSLLASGSADCTVKLWDV 618
++++S + LLAS S D TV++WD+
Sbjct: 510 SVSFSHDSRLLASASNDQTVRIWDI 534
Score = 289 (106.8 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 64/200 (32%), Positives = 100/200 (50%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH V S S+S + S+S D T+++W T+ + +GH+ V V F+
Sbjct: 293 EGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRL 352
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
AS+S D T +IW + GH V V + + +A+ S D TV++WD +G
Sbjct: 353 LASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTG 411
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY 597
GHR + S+ S D + +AS +D T+ +WD +G L GH V ++ +
Sbjct: 412 SLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIF 471
Query: 598 SCEGSLLASGSADCTVKLWD 617
S + LLAS S D TV++WD
Sbjct: 472 SHDSRLLASASDDRTVRIWD 491
Score = 257 (95.5 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 58/175 (33%), Positives = 87/175 (49%)
Query: 448 WSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSD 507
WS L A +GH V V ++ AS+S DRT +IW + + GH
Sbjct: 285 WSPCLQA----LEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDL 340
Query: 508 VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDE 567
V V + + +A+ +SD TV++WD +G GHR + S+ S D + +AS +
Sbjct: 341 VRSVIFSHDSRLLAS-ASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASD 399
Query: 568 DGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTST 622
D T+ +WD +G L GH V ++ +S + LLAS S D TVK+WD T +
Sbjct: 400 DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGS 454
Score = 237 (88.5 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 68/237 (28%), Positives = 106/237 (44%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGR------- 410
S S D L+A D ++K+WD + G ++ L+G +D R I + R
Sbjct: 303 SYSHDSRLLASASDDRTVKIWD-TETG--SLQHTLEGHSDLV-RSVIFSHDSRLLASASD 358
Query: 411 -----------KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
+TL +GH V S FS + S+S D+T+++W T +
Sbjct: 359 STVKIWDTGTGSLQHTL-EGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTL 417
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
+GH V V F+ AS+S D T +IW + GH V V + +
Sbjct: 418 EGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRL 477
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
+A+ S D+TVR+WD G GH S++ S++ S D R +AS D T+ +WD+
Sbjct: 478 LASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDI 534
Score = 185 (70.2 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 58/195 (29%), Positives = 91/195 (46%)
Query: 360 SQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGEND--------------TTPREDI- 404
S D L+A SDS++K+WD G ++ L+G D + +D
Sbjct: 347 SHDSRLLASA-SDSTVKIWDT---GTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDST 402
Query: 405 --IGPNGR-KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKG 461
I G +TL +GH V S FS + S+S D+T+++W T + +G
Sbjct: 403 VKIWDTGTGSLQHTL-EGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEG 461
Query: 462 HNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIA 521
H V V F+ AS+S DRT RIW ++ + GH S V V + + +A
Sbjct: 462 HRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLA 521
Query: 522 TGSSDKTVRLWDVSS 536
+ S+D+TVR+WD+ +
Sbjct: 522 SASNDQTVRIWDIEA 536
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 293 (108.2 bits), Expect = 9.2e-24, P = 9.2e-24
Identities = 81/300 (27%), Positives = 138/300 (46%)
Query: 336 SAALPSVSFYTFINTH-NGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQG 394
S+AL + H + + S G +A G D+S+ VW+M + +G +
Sbjct: 2 SSALDDPTLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKD 61
Query: 395 ENDT---TPREDIIGPNGRKRSY-----------TLYQGHSGPVYSASFSPLGDFILSSS 440
+P ++ + R ++ L++ H+G V S FS G +L++S
Sbjct: 62 AVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTAS 121
Query: 441 ADTTIRLWSTKLNANLVC-YKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLR 499
D +I+LWS ++C + HN V +F+P G S S DRT ++W Q +
Sbjct: 122 DDQSIKLWSVH-RQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIH 180
Query: 500 IMA---GHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMS 556
G+ S VD +H + IAT SSD TVR+WD+ + ++ + H + + +L+
Sbjct: 181 TFCEPGGYSSYVD---FHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFH 237
Query: 557 PDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
P G ++ + D T+ + DL GR + L GH +++S G AS +D V +W
Sbjct: 238 PSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVW 297
Score = 282 (104.3 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 62/209 (29%), Positives = 103/209 (49%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
++GH + S FSP G I S S D ++ +W+ K + + GH V VQF+P H
Sbjct: 14 FKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAH 73
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
ASSS D+T R+W + H V V + + + T S D++++LW V
Sbjct: 74 LLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHR 133
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLM---GHTSCVW 593
+ + H + + SPDG+ M S +D T+ +WD +S + + G++S V
Sbjct: 134 QKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYV- 192
Query: 594 TLAYSCEGSLLASGSADCTVKLWDVTTST 622
+ + +A+ S+D TV++WD+ T T
Sbjct: 193 --DFHPSSTCIATASSDNTVRVWDIRTHT 219
Score = 262 (97.3 bits), Expect = 6.9e-20, P = 6.9e-20
Identities = 57/209 (27%), Positives = 103/209 (49%)
Query: 410 RKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
+ R+Y + GH V FSP + SSS D T+RLW + V ++ H V V
Sbjct: 50 QSRAYR-FTGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSV 108
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
F+ G ++S D++ ++WS+ R + + + H + V C R+ + + + S D+TV
Sbjct: 109 CFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTV 168
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
+LWD SS + + F + P +A+ D T+ +WD+ + + H+
Sbjct: 169 KLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHS 228
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLWDV 618
+ V L++ G+ L + S+D T+K+ D+
Sbjct: 229 AAVNALSFHPSGNHLLTASSDSTLKILDL 257
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 281 (104.0 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 67/215 (31%), Positives = 103/215 (47%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA---NLVCYKGHNYPVWDVQ 470
+TL QGH G ++ ++ P G+ S D IR+WS N + GH + +++
Sbjct: 8 HTL-QGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLNGNTWTTKTILSDGHKRTIREIR 66
Query: 471 FNPQGHYFASSSHDRTARIWSMD--RIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
++P G Y AS+S D T IWS + + GH ++V V W + +AT S DK+
Sbjct: 67 WSPCGQYLASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKS 126
Query: 529 VRLWDVSSG---ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW--DLASGR--C 581
V +W+V+ EC + H + + P +AS D TI M+ D C
Sbjct: 127 VWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKELLASASYDNTIKMFAEDALDSDWDC 186
Query: 582 VTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
V L HTS VW++ + G L S S D ++K+W
Sbjct: 187 VATLSSHTSTVWSIDFDATGERLVSCSDDTSLKIW 221
Score = 187 (70.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 44/132 (33%), Positives = 67/132 (50%)
Query: 492 MDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFI---GHRS 548
M R+ + GH + V WH N A+ DK +R+W ++ I GH+
Sbjct: 1 MGRLNLEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLNGNTWTTKTILSDGHKR 60
Query: 549 MILSLAMSPDGRYMASGDEDGTIMMWDLASGR--CVTPLMGHTSCVWTLAYSCEGSLLAS 606
I + SP G+Y+AS DGT +W +SG C L GH + V ++++S G LLA+
Sbjct: 61 TIREIRWSPCGQYLASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 607 GSADCTVKLWDV 618
S D +V +W+V
Sbjct: 121 CSRDKSVWIWEV 132
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 308 (113.5 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 69/223 (30%), Positives = 120/223 (53%)
Query: 401 REDIIGPNGRK---RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLV 457
R+ I N R+ +S + +GH V + G+ I+S S D T+++WS L
Sbjct: 410 RQHRIDTNWRRGDLKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLR 468
Query: 458 CYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINC 517
GH VW Q + + S S DRT ++W+ + + + + GH S V C+ H++
Sbjct: 469 TLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM--HLHE 524
Query: 518 NYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA 577
+ +GS D T+R+WD+ +G+C+ + +GH + + + DGR + SG D + +WD
Sbjct: 525 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPE 582
Query: 578 SGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
+ C+ L GHT+ V++L + +G + SGS D ++++WDV T
Sbjct: 583 TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET 623
Score = 272 (100.8 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 79/299 (26%), Positives = 140/299 (46%)
Query: 363 GSLVAGGFSDSSLKVWDMAKLGQ--QAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGH 420
G+ + G D++LKVW A G+ + + G + R++II R+ ++
Sbjct: 444 GNRIVSGSDDNTLKVWS-AVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAE 502
Query: 421 SGPVYSASFSPLGDF---------ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
+G + ++S S D T+R+W + L GH V VQ+
Sbjct: 503 TGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 562
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+ G S ++D ++W + L + GH + V +++ + ++ +GS D ++R+
Sbjct: 563 D--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRV 618
Query: 532 WDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMG---H 588
WDV +G C+ GH+S L+ M + SG+ D T+ +WD+ +G+C+ L G H
Sbjct: 619 WDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKH 676
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV--LKTEEKSGTN----RLRSLKT 641
S V L ++ + + + S D TVKLWD+ T + L T E G+ R+R+ T
Sbjct: 677 QSAVTCLQFN--KNFVITSSDDGTVKLWDLRTGEFIRNLVTLESGGSGGVVWRIRASNT 733
Score = 136 (52.9 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 30/102 (29%), Positives = 53/102 (51%)
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
YI D R D+ S + ++ GH +++ + G + SG +D T+ +W +
Sbjct: 408 YIRQHRIDTNWRRGDLKSPKVLK---GHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVT 463
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
G+C+ L+GHT VW+ +++ SGS D T+K+W+ T
Sbjct: 464 GKCLRTLVGHTGGVWSS--QMRDNIIISGSTDRTLKVWNAET 503
Score = 42 (19.8 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 16 KKGFSEAENALQAEIQRNKSSNNTNPIDILNDPELSKFF---RTFSESED--GPARYQD 69
+ G + A N++ R +P +L +PE + R +E ED GP R QD
Sbjct: 21 RPGTAGAGNSISG---RTPQPQPEHPDQVLEEPEQEEAQQQRREPAEEEDEGGPERQQD 76
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 298 (110.0 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 72/225 (32%), Positives = 114/225 (50%)
Query: 411 KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQ 470
KR + +GH +YS F P GD ++S S D ++R+W + + + + V V
Sbjct: 287 KRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIED-GVTTVA 345
Query: 471 FNPQGHYFASSSHDRTARIWS------MDRIQPLRIMA-GHLSDVDCVRWHINCNYIATG 523
+P G A+ S DRT R+W ++R+ GH V V + N IA+G
Sbjct: 346 VSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASG 405
Query: 524 SSDKTVRLWDVSS-----GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
S D+TV+LW + C +IGH+ +LS+ +PD Y+ SG +D ++ WD AS
Sbjct: 406 SLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQAS 465
Query: 579 GRCVTPLMGHTSCVWTLAYSC--EGS--LLASGSADCTVKLWDVT 619
G + L GH + V ++A S +G+ + A+GS DC ++W T
Sbjct: 466 GNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIWKWT 510
Score = 251 (93.4 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 66/218 (30%), Positives = 111/218 (50%)
Query: 420 HSGPVYSASFSPLGDFILSSSADTT--IRLWSTKLNANLV------------CYKGHNYP 465
HS V FS G FI + TT + + +L A L+ G Y
Sbjct: 199 HSSVVCCVRFSRDGKFIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLY- 257
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
+ V F+P G A+ + D+ RIW + + ++I+ GH D+ + + + + + +GS
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 526 DKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPL 585
D++VR+WD+ + +C + + + ++A+SPDG+ +A+G D T+ +WD +G V L
Sbjct: 318 DRSVRIWDLRTSQC-SLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERL 376
Query: 586 -------MGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
GH V+++A+S G +ASGS D TVKLW
Sbjct: 377 DSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLW 414
Score = 244 (91.0 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 76/282 (26%), Positives = 123/282 (43%)
Query: 356 CASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYT 415
C S+DG +A G + ++ +V+++ G+ L E+ ++D +G
Sbjct: 205 CVRFSRDGKFIATGCNKTT-QVFNVTT-GELVAK--LIDESSNENKDDNTTASG-----D 255
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQG 475
LY + S FSP G + + + D IR+W + +GH ++ + F P G
Sbjct: 256 LY------IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDG 309
Query: 476 HYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS 535
S S DR+ RIW + R + V V + IA GS D+TVR+WD +
Sbjct: 310 DRLVSGSGDRSVRIWDL-RTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDST 368
Query: 536 SGECV-RIFIG------HRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS-----GRCVT 583
+G V R+ G H + S+A S +G +ASG D T+ +W L C
Sbjct: 369 TGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEV 428
Query: 584 PLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
+GH V ++ + + + SGS D V WD + +L
Sbjct: 429 TYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLL 470
Score = 193 (73.0 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 48/132 (36%), Positives = 75/132 (56%)
Query: 504 HLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRS--------------M 549
H S V CVR+ + +IATG + KT ++++V++GE V I S
Sbjct: 199 HSSVVCCVRFSRDGKFIATGCN-KTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLY 257
Query: 550 ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSA 609
I S+ SPDG+ +A+G ED I +WDL++ R + L GH +++L + +G L SGS
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 610 DCTVKLWDVTTS 621
D +V++WD+ TS
Sbjct: 318 DRSVRIWDLRTS 329
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 52/192 (27%), Positives = 81/192 (42%)
Query: 348 INTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGP 407
++ +G+ ++S DG L+A G D +++VWD ++G E + E+ G
Sbjct: 335 LSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDS--------TTGFLVERLDSGNEN--G- 383
Query: 408 NGRKRS-YTLYQGHSGP-VYSASFS-PLGDFILSSSADTTIRLWSTKLNANLVCYKGHNY 464
NG + S Y++ ++G + S S + + L +D K + V Y GH
Sbjct: 384 NGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSD--------KKSTCEVTYIGHKD 435
Query: 465 PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCN----YI 520
V V P Y S S DR W PL ++ GH + V V +N
Sbjct: 436 FVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIF 495
Query: 521 ATGSSDKTVRLW 532
ATGS D R+W
Sbjct: 496 ATGSGDCKARIW 507
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 298 (110.0 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 72/225 (32%), Positives = 114/225 (50%)
Query: 411 KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQ 470
KR + +GH +YS F P GD ++S S D ++R+W + + + + V V
Sbjct: 287 KRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIED-GVTTVA 345
Query: 471 FNPQGHYFASSSHDRTARIWS------MDRIQPLRIMA-GHLSDVDCVRWHINCNYIATG 523
+P G A+ S DRT R+W ++R+ GH V V + N IA+G
Sbjct: 346 VSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASG 405
Query: 524 SSDKTVRLWDVSS-----GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
S D+TV+LW + C +IGH+ +LS+ +PD Y+ SG +D ++ WD AS
Sbjct: 406 SLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQAS 465
Query: 579 GRCVTPLMGHTSCVWTLAYSC--EGS--LLASGSADCTVKLWDVT 619
G + L GH + V ++A S +G+ + A+GS DC ++W T
Sbjct: 466 GNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIWKWT 510
Score = 251 (93.4 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 66/218 (30%), Positives = 111/218 (50%)
Query: 420 HSGPVYSASFSPLGDFILSSSADTT--IRLWSTKLNANLV------------CYKGHNYP 465
HS V FS G FI + TT + + +L A L+ G Y
Sbjct: 199 HSSVVCCVRFSRDGKFIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLY- 257
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
+ V F+P G A+ + D+ RIW + + ++I+ GH D+ + + + + + +GS
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 526 DKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPL 585
D++VR+WD+ + +C + + + ++A+SPDG+ +A+G D T+ +WD +G V L
Sbjct: 318 DRSVRIWDLRTSQC-SLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERL 376
Query: 586 -------MGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
GH V+++A+S G +ASGS D TVKLW
Sbjct: 377 DSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLW 414
Score = 244 (91.0 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 76/282 (26%), Positives = 123/282 (43%)
Query: 356 CASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYT 415
C S+DG +A G + ++ +V+++ G+ L E+ ++D +G
Sbjct: 205 CVRFSRDGKFIATGCNKTT-QVFNVTT-GELVAK--LIDESSNENKDDNTTASG-----D 255
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQG 475
LY + S FSP G + + + D IR+W + +GH ++ + F P G
Sbjct: 256 LY------IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDG 309
Query: 476 HYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS 535
S S DR+ RIW + R + V V + IA GS D+TVR+WD +
Sbjct: 310 DRLVSGSGDRSVRIWDL-RTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDST 368
Query: 536 SGECV-RIFIG------HRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS-----GRCVT 583
+G V R+ G H + S+A S +G +ASG D T+ +W L C
Sbjct: 369 TGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEV 428
Query: 584 PLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
+GH V ++ + + + SGS D V WD + +L
Sbjct: 429 TYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLL 470
Score = 193 (73.0 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 48/132 (36%), Positives = 75/132 (56%)
Query: 504 HLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRS--------------M 549
H S V CVR+ + +IATG + KT ++++V++GE V I S
Sbjct: 199 HSSVVCCVRFSRDGKFIATGCN-KTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLY 257
Query: 550 ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSA 609
I S+ SPDG+ +A+G ED I +WDL++ R + L GH +++L + +G L SGS
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 610 DCTVKLWDVTTS 621
D +V++WD+ TS
Sbjct: 318 DRSVRIWDLRTS 329
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 52/192 (27%), Positives = 81/192 (42%)
Query: 348 INTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGP 407
++ +G+ ++S DG L+A G D +++VWD ++G E + E+ G
Sbjct: 335 LSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDS--------TTGFLVERLDSGNEN--G- 383
Query: 408 NGRKRS-YTLYQGHSGP-VYSASFS-PLGDFILSSSADTTIRLWSTKLNANLVCYKGHNY 464
NG + S Y++ ++G + S S + + L +D K + V Y GH
Sbjct: 384 NGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSD--------KKSTCEVTYIGHKD 435
Query: 465 PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCN----YI 520
V V P Y S S DR W PL ++ GH + V V +N
Sbjct: 436 FVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIF 495
Query: 521 ATGSSDKTVRLW 532
ATGS D R+W
Sbjct: 496 ATGSGDCKARIW 507
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 297 (109.6 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 106/408 (25%), Positives = 174/408 (42%)
Query: 237 ENRLEKTGLISDSEKAEGE-NKEAEIDENKKRPVEGGKQGASIKKLKKDKAINATAKTSR 295
E EK EK G+ ++E ID+ K G GA D + T++TS
Sbjct: 197 EREREKIEREKSHEKQLGDADREMVIDQTDKEIAGDGSTGAE----PMDIVMTPTSQTSH 252
Query: 296 LEANTVSTAPRVKPDL-ALPVMPTEVEQSILEDLRNRVHLSSAALPSVSFYTFINTHNGL 354
+ + V ++ A P+ S+L ++P SF ++T +
Sbjct: 253 IPNSDVRILEGHTSEVCACAWSPSA---SLLASGSGDATARIWSIPEGSFKA-VHTGRNI 308
Query: 355 NCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQ-GENDTTPREDIIGPNGRKRS 413
N + A G S+ K D+ L + L G D R I NG S
Sbjct: 309 NALILKH-----AKGKSNEKSK--DVTTLDWNGEGTLLATGSCDGQAR--IWTLNGELIS 359
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNP 473
TL + H GP++S ++ GD++L+ S D T +W K ++ H+ P DV +
Sbjct: 360 -TLSK-HKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWR- 416
Query: 474 QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
FA+SS D + + +P + GH +V+CV+W + +A+ S D T ++W+
Sbjct: 417 NNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWN 476
Query: 534 VSSGECVRIFIGHRSMILSLAMSPDGR---------YMASGDEDGTIMMWDLASGRCVTP 584
+ V H I ++ SP G +AS D T+ +WD G+ +
Sbjct: 477 IKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCS 536
Query: 585 LMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
GH V++LA+S G +ASGS D ++ +W + K++KT +G
Sbjct: 537 FNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEG-KIVKTYTGNG 583
Score = 248 (92.4 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 65/210 (30%), Positives = 106/210 (50%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
++ HSGP + F +SS D+ I L + GH V V+++P G
Sbjct: 403 FEFHSGPTLDVDWRNNVSFA-TSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGS 461
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHI------NCNY---IATGSSDK 527
AS S D TA+IW++ + + + H ++ +RW N N +A+ S D
Sbjct: 462 LLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDS 521
Query: 528 TVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMG 587
TV+LWD G+ + F GHR + SLA SP+G Y+ASG D +I +W + G+ V G
Sbjct: 522 TVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTG 581
Query: 588 HTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
+ ++ + ++ EG+ +A+ AD +V + D
Sbjct: 582 NGG-IFEVCWNKEGNKIAACFADNSVCVLD 610
Score = 47 (21.6 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 1 MDELQVVEF---VATYLKKKGFSEAENALQAEIQRNKSSNNTNPI 42
M L VE V YL++ GF+ A L E NKS+ + N +
Sbjct: 1 MSSLTSVELNFLVFRYLQESGFTHAAFTLGYEAGINKSNIDGNMV 45
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 302 (111.4 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 67/214 (31%), Positives = 109/214 (50%)
Query: 411 KRSYTLYQ--GHSGPVYSASFSPLGDFIL-SSSADTTIRLWST-KLNANLVCYKGHNYPV 466
KR+Y L + HS V +L + D + LW+ K NA L Y GH+ +
Sbjct: 4 KRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLY-GHSSGI 62
Query: 467 WDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSD 526
V F+ A+ + T ++W ++ + +R + GH S+ V +H + A+GS D
Sbjct: 63 DSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
Query: 527 KTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLM 586
+++WD+ C+ + GH + L +PDGR++ SG ED + +WDL +G+ +T
Sbjct: 123 TNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFK 182
Query: 587 GHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
H + +L + LLA+GSAD TVK WD+ T
Sbjct: 183 SHEGQIQSLDFHPHEFLLATGSADRTVKFWDLET 216
Score = 248 (92.4 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 52/164 (31%), Positives = 86/164 (52%)
Query: 480 SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGEC 539
+ D +W++ + + + GH S +D V + + +A G++ T++LWD+ +
Sbjct: 34 TGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKI 93
Query: 540 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSC 599
VR GHRS +S+ P G + ASG D + +WD+ C+ GHT V L ++
Sbjct: 94 VRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTP 153
Query: 600 EGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLP 643
+G + SG D VK+WD+T K+L TE KS +++SL P
Sbjct: 154 DGRWVVSGGEDNIVKVWDLTAG-KLL-TEFKSHEGQIQSLDFHP 195
Score = 236 (88.1 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 65/240 (27%), Positives = 115/240 (47%)
Query: 382 KLGQQAVSSGLQGENDTTPREDIIG-PNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSS 440
K+G+++ + G D IG PN +LY GHS + S +F + + +
Sbjct: 23 KIGRKSSRVLVTGGEDHKVNLWAIGKPNA---ILSLY-GHSSGIDSVTFDASEVLVAAGA 78
Query: 441 ADTTIRLWSTKLNANLV-CYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLR 499
A TI+LW + A +V GH V F+P G +FAS S D +IW + + +
Sbjct: 79 ASGTIKLWDLE-EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIH 137
Query: 500 IMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDG 559
GH V+ +R+ + ++ +G D V++WD+++G+ + F H I SL P
Sbjct: 138 TYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHE 197
Query: 560 RYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKL--WD 617
+A+G D T+ WDL + + T+ V L+++ +G + G + ++K+ W+
Sbjct: 198 FLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQE-SLKIFSWE 256
Score = 136 (52.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 45/219 (20%), Positives = 95/219 (43%)
Query: 330 NRVHLSSAALPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDM--AKL---- 383
++V+L + P+ + + +G++ + LVA G + ++K+WD+ AK+
Sbjct: 39 HKVNLWAIGKPN-AILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTL 97
Query: 384 -GQQA--VSSGLQ--GENDTTPREDI---IGPNGRKRSYTLYQGHSGPVYSASFSPLGDF 435
G ++ +S GE + D I +K Y+GH+ V F+P G +
Sbjct: 98 TGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRW 157
Query: 436 ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRI 495
++S D +++W L +K H + + F+P A+ S DRT + W ++
Sbjct: 158 VVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETF 217
Query: 496 QPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT-VRLWD 533
+ + + V C+ ++ + + G + + W+
Sbjct: 218 ELIGSGGPETAGVRCLSFNPDGKTVLCGLQESLKIFSWE 256
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 292 (107.8 bits), Expect = 2.6e-23, P = 2.6e-23
Identities = 71/229 (31%), Positives = 109/229 (47%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA-NLVCYKGHNYPVWDVQFNPQGH 476
+GHS V S +FSP G ++ S S DTT+R W + C +GH + V + ++P G
Sbjct: 62 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC-QGHRHWVLSISWSPDGK 120
Query: 477 YFASSSHDRTARIWSMDRIQPL-RIMAGHLSDVDCVRW---HIN--CNYIATGSSDKTVR 530
AS + +W + + R++AGH + + W H N C Y+A+ S D +VR
Sbjct: 121 TLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVR 180
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
+WD ++G C RI GH + L DG + S +D TI +W G L GH
Sbjct: 181 VWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGH 239
Query: 591 CVWTLAYSCEGSLLASG--SADCTVKLWDVTTSTKVLKTEEKSGTNRLR 637
V T+A S + +L A+ ++ D+ S + LK N +R
Sbjct: 240 WVNTMALSTDYALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLVR 288
Score = 272 (100.8 bits), Expect = 6.4e-21, P = 6.4e-21
Identities = 67/189 (35%), Positives = 96/189 (50%)
Query: 434 DFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMD 493
D I A +R T+ ++L +GH+ V V F+P G Y AS S D T R W +
Sbjct: 40 DIIYQPQAIFRVRA-VTRCTSSL---EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLS 95
Query: 494 RIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECV-RIFIGHRSMILS 552
P GH V + W + +A+G + + LWD S+G+ V R+ GH I
Sbjct: 96 TETPHFTCQGHRHWVLSISWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITG 155
Query: 553 LAM-----SPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASG 607
L+ +P+ RYMAS +DG++ +WD +GRC L GHT V L + +G LL S
Sbjct: 156 LSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSA 214
Query: 608 SADCTVKLW 616
S D T+K+W
Sbjct: 215 SQDRTIKVW 223
Score = 219 (82.2 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 67/267 (25%), Positives = 128/267 (47%)
Query: 366 VAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPR---EDIIGPNGRKRSYTLYQGHSG 422
+A D S++VWD + + +G ++ T R + ++ + R+ +++ H G
Sbjct: 170 MASSSKDGSVRVWDTTAGRCERILTG-HTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG 228
Query: 423 PVYSASFSPLGDFI--LSSSADTTIRLWS---TKLNANLVCYKGHNYPVWDV---QFN-- 472
V + G ++ ++ S D +R + + + N +G + D ++N
Sbjct: 229 -VLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLV 287
Query: 473 -PQG-HYFASSSHDRTARIWS-MDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
QG S S D T +WS + +PL M GH + ++ V + + IA+ S DK++
Sbjct: 288 RGQGPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSI 347
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
+LWD +G+ + GH + + +A S D R + SG D T+ +WD+ + + L GH
Sbjct: 348 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHA 407
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLW 616
V+ + +S +G +ASG D +++W
Sbjct: 408 DEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 208 (78.3 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 62/214 (28%), Positives = 107/214 (50%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFIL-SSSADTTIRLWSTKLNANLVC--YKGHNYPVWD 468
R + GH+ V + GD +L S+S D TI++W + + ++C +GH + V
Sbjct: 188 RCERILTGHTQSVTCLRWG--GDGLLYSASQDRTIKVW--RAHDGVLCRTLQGHGHWVNT 243
Query: 469 VQFNPQGHYFASSSHDRTARIWSMD---RIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
+ + + A I + D +Q L+ A L + VR + +GS
Sbjct: 244 MALSTDYALRTGAFEPAEASINAQDLQGSLQELKDRA--LRRYNLVRGQ-GPERLVSGSD 300
Query: 526 DKTVRLWDVSSGEC-VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTP 584
D T+ +W + + + GH+++I + SPD R +AS D +I +WD +G+ +
Sbjct: 301 DFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLAS 360
Query: 585 LMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
L GH + V+ +A+S + LL SGS+D T+K+WDV
Sbjct: 361 LRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV 394
Score = 199 (75.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 46/125 (36%), Positives = 73/125 (58%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
+ GH V V + Y+A+GS D TVR WD+S+ GHR +LS++ SPDG+
Sbjct: 61 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 120
Query: 561 YMASGDEDGTIMMWDLASGRCV-TPLMGHTSCVWTLAY-----SCEGSLLASGSADCTVK 614
+ASG ++G I++WD ++G+ V L GH+ + L++ + E +AS S D +V+
Sbjct: 121 TLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVR 180
Query: 615 LWDVT 619
+WD T
Sbjct: 181 VWDTT 185
Score = 196 (74.1 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 69/242 (28%), Positives = 102/242 (42%)
Query: 394 GENDTTPRE-DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLW--ST 450
G DTT R D+ + + QGH V S S+SP G + S + I LW ST
Sbjct: 83 GSGDTTVRFWDL----STETPHFTCQGHRHWVLSISWSPDGKTLASGCKNGQILLWDPST 138
Query: 451 KLNANLVCYKGHNYPV----WD-VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHL 505
V GH+ + W+ + NP+ Y ASSS D + R+W + RI+ GH
Sbjct: 139 GKQVGRVL-AGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERILTGHT 197
Query: 506 SDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASG 565
V C+RW + + + S D+T+++W G R GH + ++A+S D
Sbjct: 198 QSVTCLRWGGD-GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGA 256
Query: 566 DE--DGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTK 623
E + +I DL + L + L L SGS D T+ +W K
Sbjct: 257 FEPAEASINAQDLQGS--LQELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKK 314
Query: 624 VL 625
L
Sbjct: 315 PL 316
Score = 158 (60.7 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS 598
C GH ++S+A SP G+Y+ASG D T+ WDL++ GH V ++++S
Sbjct: 57 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWS 116
Query: 599 CEGSLLASGSADCTVKLWDVTTSTKV 624
+G LASG + + LWD +T +V
Sbjct: 117 PDGKTLASGCKNGQILLWDPSTGKQV 142
Score = 155 (59.6 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 55/225 (24%), Positives = 104/225 (46%)
Query: 407 PNGRKRSYTLYQGHSGPVYSASFSPLGD-----FILSSSADTTIRLWSTKLNANLVCYKG 461
P+ K+ + GHS + S+ PL ++ SSS D ++R+W T G
Sbjct: 136 PSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERILTG 195
Query: 462 HNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY-I 520
H V +++ G + S+S DRT ++W R + GH V+ + ++ +Y +
Sbjct: 196 HTQSVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMA--LSTDYAL 252
Query: 521 ATGS---SDKTVRLWDVSSGECVRIFIGHRSMI-LSLAMSPDGRYMASGDEDGTIMMWDL 576
TG+ ++ ++ D+ G + R++ +L + SG +D T+ MW
Sbjct: 253 RTGAFEPAEASINAQDLQ-GSLQEL--KDRALRRYNLVRGQGPERLVSGSDDFTLFMWSP 309
Query: 577 ASGRC-VTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
A + + + GH + + + +S + ++AS S D ++KLWD T
Sbjct: 310 AEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT 354
Score = 47 (21.6 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMA 381
+ S G +A G D++++ WD++
Sbjct: 72 AFSPTGKYLASGSGDTTVRFWDLS 95
Score = 45 (20.9 bits), Expect = 8.1e-14, Sum P(2) = 8.1e-14
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGEN 396
S S DG +A G + + +WD + G+Q V L G +
Sbjct: 114 SWSPDGKTLASGCKNGQILLWDPST-GKQ-VGRVLAGHS 150
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 296 (109.3 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 86/294 (29%), Positives = 144/294 (48%)
Query: 353 GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKR 412
G++ S D S++A G +D ++KVW A S+G K
Sbjct: 178 GVSAVRFSPDASMIASGGADGAVKVW--------AASTG-------------------KL 210
Query: 413 SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLN-ANLVCYKGHNYPVWDVQF 471
YT ++GH + + S+SP G I S S D TIRLW+ A+ + GH+ V+ + F
Sbjct: 211 IYT-FEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAF 269
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH---LSDVDCVRWHINCNYIATGSSDKT 528
+P+G+ S S+D +W + + ++ + H +S +D V W + IA+ ++D
Sbjct: 270 SPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVV-W--DGTLIASCATDGL 326
Query: 529 VRLWDVSSGECVRIFIGHRSM-ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMG 587
VR+WD S+G+C+R + + + S+ SP+G+Y+ + D + +WD GRC+ G
Sbjct: 327 VRIWDTSTGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQG 386
Query: 588 HTSCVWTL--AYSCEGSLL----------ASGSADCTVKLWDVTTSTKVLKTEE 629
H++ ++L A+ G + SGS D + WDV T KVL+ E
Sbjct: 387 HSNKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSEDGAILCWDVVTK-KVLQRIE 439
Score = 270 (100.1 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 58/185 (31%), Positives = 97/185 (52%)
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
+GH V V+F+P AS D ++W+ + + GHL+ + + W +
Sbjct: 173 RGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGAT 232
Query: 520 IATGSSDKTVRLWDVSSGECVRI-FIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
IA+GS DKT+RLW+V +G+ FIGH + + ++A SP G + SG D + +WD+ S
Sbjct: 233 IASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRS 292
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRS 638
R + L H+ V + +G+L+AS + D V++WD +T + L+T + S
Sbjct: 293 ARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTG-QCLRTLVHEDNPPVSS 351
Query: 639 LKTLP 643
+K P
Sbjct: 352 VKFSP 356
Score = 260 (96.6 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 64/231 (27%), Positives = 114/231 (49%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
R L +GH V + FSP I S AD +++W+ + ++GH + + +
Sbjct: 167 RQKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISW 226
Query: 472 NPQGHYFASSSHDRTARIWSM--DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
+P G AS S D+T R+W++ + P + GH + V + + N + +GS D+ V
Sbjct: 227 SPDGATIASGSDDKTIRLWNVLTGKAHPTPFI-GHHNYVYAIAFSPKGNMLVSGSYDEAV 285
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
LWDV S ++ H + + + DG +AS DG + +WD ++G+C+ L+
Sbjct: 286 FLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHED 345
Query: 590 SC-VWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSL 639
+ V ++ +S G + + + D V+LWD + LKT + +N+ SL
Sbjct: 346 NPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEG-RCLKTYQ-GHSNKKYSL 394
Score = 254 (94.5 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 56/157 (35%), Positives = 93/157 (59%)
Query: 500 IMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDG 559
++ GHL V VR+ + + IA+G +D V++W S+G+ + F GH + I +++ SPDG
Sbjct: 171 LLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDG 230
Query: 560 RYMASGDEDGTIMMWDLASGRC-VTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
+ASG +D TI +W++ +G+ TP +GH + V+ +A+S +G++L SGS D V LWDV
Sbjct: 231 ATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDV 290
Query: 619 TTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQVL 655
++ R +K+LP S PV + V+
Sbjct: 291 RSA---------------RVMKSLPAHSDPVSGIDVV 312
Score = 251 (93.4 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 82/298 (27%), Positives = 129/298 (43%)
Query: 337 AALPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGEN 396
AA YTF G++ S S DG+ +A G D ++++W++ L G+
Sbjct: 204 AASTGKLIYTFEGHLAGISTISWSPDGATIASGSDDKTIRLWNV-----------LTGKA 252
Query: 397 DTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANL 456
TP + GH VY+ +FSP G+ ++S S D + LW + +
Sbjct: 253 HPTP----------------FIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVM 296
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSD--VDCVRWH 514
H+ PV + G AS + D RIW Q LR + H + V V++
Sbjct: 297 KSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLV-HEDNPPVSSVKFS 355
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLA-------MSPDGR-----YM 562
N Y+ + D VRLWD G C++ + GH + SL+ S GR +
Sbjct: 356 PNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFA 415
Query: 563 ASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSC---EGSLLASGSADCTVKLWD 617
SG EDG I+ WD+ + + + + H V + +C EG + S D TV++W+
Sbjct: 416 VSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVD-TCSTGEGRFMVSCGLDGTVRVWE 472
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 298 (110.0 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 65/211 (30%), Positives = 108/211 (51%)
Query: 422 GPVY--SASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFA 479
G +Y S FSP G+++ + + D T+++W + GH ++ + ++ G +
Sbjct: 326 GDLYIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIV 385
Query: 480 SSSHDRTARIWSMDRIQPLRIMA----GHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS 535
S S D+ A+IW +++ + + G + V V + +A GS D VRLWD
Sbjct: 386 SGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQ 445
Query: 536 SGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR----CVTPLMGHTSC 591
+G + + GH + S+A SPDG+ +ASG D ++ +WDL+ R C GH
Sbjct: 446 TGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDF 505
Query: 592 VWTLAYSCEGSLLASGSADCTVKLWDVTTST 622
V ++A+S +GS L SGS D +V+ WD T
Sbjct: 506 VLSVAFSPDGSWLISGSKDRSVQFWDPRNGT 536
Score = 286 (105.7 bits), Expect = 5.6e-22, P = 5.6e-22
Identities = 60/211 (28%), Positives = 113/211 (53%)
Query: 420 HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY-----KGHNYPVWDVQFNPQ 474
H+ V +FS G + L++ + + +++ + + K + + V F+P
Sbjct: 280 HNSVVCCVNFSNDGKY-LATGCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDV 534
G+Y A+ + D+T ++W + + GH D+ + + + +I +GS DK ++WD+
Sbjct: 339 GNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDI 398
Query: 535 SSGECVRIF----IGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
G+C +G ++ + S+AMSPDGR +A+G D + +WD +G + GH
Sbjct: 399 EKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLD 458
Query: 591 CVWTLAYSCEGSLLASGSADCTVKLWDVTTS 621
V+++A+S +G LASGS D ++KLWD++ S
Sbjct: 459 SVYSVAFSPDGKSLASGSLDKSLKLWDLSGS 489
Score = 279 (103.3 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 71/218 (32%), Positives = 107/218 (49%)
Query: 410 RKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWST---KLNANLVCYK-GHNYP 465
+K +T Y GH +YS +S G FI+S S D ++W K L + G
Sbjct: 359 KKIQHTFY-GHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNG 417
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
V V +P G A+ S D R+W L GHL V V + + +A+GS
Sbjct: 418 VTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSL 477
Query: 526 DKTVRLWDVSSGE----CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRC 581
DK+++LWD+S C F GH+ +LS+A SPDG ++ SG +D ++ WD +G
Sbjct: 478 DKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTT 537
Query: 582 VTPLMGHTSCVWTLAYSCEGS---LLASGSADCTVKLW 616
L GH + V ++A S + + + A+GS D +LW
Sbjct: 538 HMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLW 575
Score = 248 (92.4 bits), Expect = 9.0e-18, P = 9.0e-18
Identities = 63/180 (35%), Positives = 97/180 (53%)
Query: 450 TKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLS-DV 508
T LN +L+ HN V V F+ G Y A+ + R+A+I+ +D + + D
Sbjct: 268 TNLNIDLLHNLQHNSVVCCVNFSNDGKYLATGCN-RSAQIYDVDTGKKVHAFVDESEKDG 326
Query: 509 DC-VR---WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
D +R + + NY+ATG+ DKTV++WD+ + + F GH I SL S DGR++ S
Sbjct: 327 DLYIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVS 386
Query: 565 GDEDGTIMMWDLASGRCVTPL----MGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
G D +WD+ G+C L +G + V ++A S +G L+A+GS D V+LWD T
Sbjct: 387 GSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQT 446
Score = 158 (60.7 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 42/127 (33%), Positives = 57/127 (44%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTK-LNANLVC---YKGHNYPVWDVQFN 472
Y+GH VYS +FSP G + S S D +++LW + C + GH V V F+
Sbjct: 453 YEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFS 512
Query: 473 PQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCN---YIATGSSDKTV 529
P G + S S DR+ + W ++ GH + V V N ATGS D
Sbjct: 513 PDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRS 572
Query: 530 RLWDVSS 536
RLW S
Sbjct: 573 RLWKYDS 579
Score = 134 (52.2 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 28/94 (29%), Positives = 46/94 (48%)
Query: 403 DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGH 462
D+ G R R + GH V S +FSP G +++S S D +++ W + + +GH
Sbjct: 485 DLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGH 544
Query: 463 NYPVWDVQFNPQGH---YFASSSHDRTARIWSMD 493
V V +P+ + FA+ S D +R+W D
Sbjct: 545 KNSVISVALSPKNNSHGVFATGSGDFRSRLWKYD 578
Score = 70 (29.7 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 348 INTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLG 384
+ NG+ ++S DG LVA G D+ +++WD A+ G
Sbjct: 412 VGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWD-AQTG 447
Score = 66 (28.3 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 18/70 (25%), Positives = 30/70 (42%)
Query: 345 YTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDI 404
+TF + S DG + G D K+WD+ K G+ A + G + P+ +
Sbjct: 363 HTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEK-GKCAFTLG---NEEVGPKNGV 418
Query: 405 ----IGPNGR 410
+ P+GR
Sbjct: 419 TSVAMSPDGR 428
Score = 61 (26.5 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMA 381
+ S DG +A G D SLK+WD++
Sbjct: 464 AFSPDGKSLASGSLDKSLKLWDLS 487
Score = 57 (25.1 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 360 SQDGSLVAGGFSDSSLKVWDM 380
S DG+ +A G D ++KVWD+
Sbjct: 336 SPDGNYLATGAEDKTVKVWDI 356
Score = 43 (20.2 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 351 HNGLNCA-SISQDGSLVAGGFSDSSLKVWDM 380
HN + C + S DG +A G + S+ +++D+
Sbjct: 280 HNSVVCCVNFSNDGKYLATGCNRSA-QIYDV 309
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 298 (110.0 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 65/219 (29%), Positives = 108/219 (49%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQ 474
TL Q H GP+++ ++ G+FILS+ D T +W + H+ P DV +
Sbjct: 261 TLGQ-HKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQ-S 318
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDV 534
+ FAS S D + + + +P++ GH ++V+ ++W N +A+ S D T+++W +
Sbjct: 319 NNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM 378
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGR---------YMASGDEDGTIMMWDLASGRCVTPL 585
CV H I ++ SP G +AS D T+ +WD+ G C+ L
Sbjct: 379 KQDNCVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTL 438
Query: 586 MGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
H V+++A+S +G LASGS D V +W+ T V
Sbjct: 439 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALV 477
Score = 260 (96.6 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 61/212 (28%), Positives = 105/212 (49%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQG 475
L+ HS P + F S S D I + + + ++GH V ++++P G
Sbjct: 303 LFPFHSAPALDVDWQSNNTFA-SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTG 361
Query: 476 HYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW--------HINCNY-IATGSSD 526
+ AS S D T +IWSM + + + H ++ ++W + N N +A+ S D
Sbjct: 362 NLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFD 421
Query: 527 KTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLM 586
TVRLWDV G C+ H+ + S+A SPDGRY+ASG D + +W+ +G V
Sbjct: 422 STVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYR 481
Query: 587 GHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
G T ++ + ++ G + + ++D +V + D+
Sbjct: 482 G-TGGIFEVCWNAAGDKVGASASDGSVCVLDL 512
Score = 244 (91.0 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 67/241 (27%), Positives = 115/241 (47%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLW-----STKLNANLV---CYK--GHNYP-- 465
+GH V+ +++P+ D + S S D+T R+W ST + LV C + G + P
Sbjct: 166 RGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSN 225
Query: 466 --VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATG 523
V + +N +G A+ S+D ARIW+ D + H + ++W+ N+I +
Sbjct: 226 KDVTSLDWNSEGTLLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKKGNFILSA 284
Query: 524 SSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVT 583
DKT +WD +GE ++F H + L + + + AS D I + L R +
Sbjct: 285 GVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPIK 343
Query: 584 PLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLP 643
GHT+ V + + G+LLAS S D T+K+W + V + ++ + ++K P
Sbjct: 344 TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCV--HDLQAHNKEIYTIKWSP 401
Query: 644 T 644
T
Sbjct: 402 T 402
Score = 227 (85.0 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 67/264 (25%), Positives = 120/264 (45%)
Query: 365 LVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPV 424
L+A G DS+ ++W++++ + G R I R+ + V
Sbjct: 183 LLASGSGDSTARIWNLSE-------NSTSGSTQLVLRHCI-----REGGQDVPSNKD--V 228
Query: 425 YSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKG-HNYPVWDVQFNPQGHYFASSSH 483
S ++ G + + S D R+W TK + NL G H P++ +++N +G++ S+
Sbjct: 229 TSLDWNSEGTLLATGSYDGFARIW-TK-DGNLASTLGQHKGPIFALKWNKKGNFILSAGV 286
Query: 484 DRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIF 543
D+T IW + ++ H + V W N N A+ S+D + + + ++ F
Sbjct: 287 DKTTIIWDAHTGEAKQLFPFHSAPALDVDWQSN-NTFASCSTDMCIHVCKLGQDRPIKTF 345
Query: 544 IGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS- 602
GH + + ++ P G +AS +D T+ +W + CV L H ++T+ +S G
Sbjct: 346 QGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPG 405
Query: 603 --------LLASGSADCTVKLWDV 618
+LAS S D TV+LWDV
Sbjct: 406 TSNPNANLMLASASFDSTVRLWDV 429
Score = 204 (76.9 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 48/177 (27%), Positives = 87/177 (49%)
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
G+ R +QGH+ V + + P G+ + S S D T+++WS K + + + HN ++
Sbjct: 337 GQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYT 396
Query: 469 VQFNPQGH---------YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
++++P G AS+S D T R+W +DR + + H V V + + Y
Sbjct: 397 IKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRY 456
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
+A+GS DK V +W+ +G V + G I + + G + + DG++ + DL
Sbjct: 457 LASGSFDKCVHIWNTQTGALVHSYRGTGG-IFEVCWNAAGDKVGASASDGSVCVLDL 512
Score = 141 (54.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 49/202 (24%), Positives = 83/202 (41%)
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQP---LRIMAGHL-------- 505
V +GH V+ +NP AS S D TARIW++ +++ H
Sbjct: 163 VVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDV 222
Query: 506 ---SDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYM 562
DV + W+ +ATGS D R+W G H+ I +L + G ++
Sbjct: 223 PSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKGNFI 281
Query: 563 ASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTST 622
S D T ++WD +G H++ + + + AS S D + + +
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQD- 339
Query: 623 KVLKTEEKSGTNRLRSLKTLPT 644
+ +KT + TN + ++K PT
Sbjct: 340 RPIKTFQ-GHTNEVNAIKWDPT 360
Score = 39 (18.8 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 7 VEF-VATYLKKKGFSEAENALQAEIQRNKSSNNTN 40
V F V YL++ GFS + A I+ + S +N N
Sbjct: 8 VNFLVYRYLQESGFSHS--AFTFGIESHISQSNIN 40
>UNIPROTKB|B4HRQ6 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7238 "Drosophila sechellia"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH480816 OrthoDB:EOG45DV4X RefSeq:XP_002033907.1
ProteinModelPortal:B4HRQ6 EnsemblMetazoa:FBtr0203159 GeneID:6609216
KEGG:dse:Dsec_GM20174 FlyBase:FBgn0175057 Uniprot:B4HRQ6
Length = 335
Score = 276 (102.2 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 66/215 (30%), Positives = 101/215 (46%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA---NLVCYKGHNYPVWDVQ 470
+TL QGH G ++ ++ P G+ S D IR+WS N + GH + +++
Sbjct: 8 HTL-QGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWGTKTILSDGHKRTIREIR 66
Query: 471 FNPQGHYFASSSHDRTARIWSMD--RIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
++P G Y AS+S D T IWS + + GH ++V V W + +AT S DK+
Sbjct: 67 WSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKS 126
Query: 529 VRLWDVSSG---ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA----SGRC 581
V +W+V+ EC + H + + P +AS D TI M+ C
Sbjct: 127 VWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDVLASASYDNTIKMFAEEPIDNDWDC 186
Query: 582 VTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
L HTS VW + + +G L S S D T+K+W
Sbjct: 187 TATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIW 221
Score = 179 (68.1 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 43/132 (32%), Positives = 67/132 (50%)
Query: 492 MDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS---GECVRIFIGHRS 548
M R+ + GH + V WH N A+ DK +R+W ++ G + GH+
Sbjct: 1 MGRLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWGTKTILSDGHKR 60
Query: 549 MILSLAMSPDGRYMASGDEDGTIMMWDLASGR--CVTPLMGHTSCVWTLAYSCEGSLLAS 606
I + SP G+Y+AS D T +W +SG C L GH + V ++++S G LLA+
Sbjct: 61 TIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 607 GSADCTVKLWDV 618
S D +V +W+V
Sbjct: 121 CSRDKSVWIWEV 132
>FB|FBgn0033972 [details] [associations]
symbol:Ciao1 "Ciao1" species:7227 "Drosophila melanogaster"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X CTD:9391 GeneTree:ENSGT00700000104486
EMBL:AY061388 RefSeq:NP_610996.1 UniGene:Dm.630
ProteinModelPortal:Q7K1Y4 SMR:Q7K1Y4 IntAct:Q7K1Y4 STRING:Q7K1Y4
PaxDb:Q7K1Y4 PRIDE:Q7K1Y4 EnsemblMetazoa:FBtr0087460 GeneID:36655
KEGG:dme:Dmel_CG12797 UCSC:CG12797-RA FlyBase:FBgn0033972
InParanoid:Q7K1Y4 PhylomeDB:Q7K1Y4 GenomeRNAi:36655 NextBio:799718
Bgee:Q7K1Y4 Uniprot:Q7K1Y4
Length = 335
Score = 276 (102.2 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 66/215 (30%), Positives = 101/215 (46%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA---NLVCYKGHNYPVWDVQ 470
+TL QGH G ++ ++ P G+ S D IR+WS N + GH + +++
Sbjct: 8 HTL-QGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIR 66
Query: 471 FNPQGHYFASSSHDRTARIWSMD--RIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
++P G Y AS+S D T IWS + + GH ++V V W + +AT S DK+
Sbjct: 67 WSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKS 126
Query: 529 VRLWDVSSG---ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA----SGRC 581
V +W+V+ EC + H + + P +AS D TI M+ C
Sbjct: 127 VWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDILASASYDNTIKMFAEEPIDNDWDC 186
Query: 582 VTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
L HTS VW + + +G L S S D T+K+W
Sbjct: 187 TATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIW 221
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 42/132 (31%), Positives = 67/132 (50%)
Query: 492 MDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE-CVRIFI--GHRS 548
M R+ + GH + V WH N A+ DK +R+W ++ + + GH+
Sbjct: 1 MGRLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKR 60
Query: 549 MILSLAMSPDGRYMASGDEDGTIMMWDLASGR--CVTPLMGHTSCVWTLAYSCEGSLLAS 606
I + SP G+Y+AS D T +W +SG C L GH + V ++++S G LLA+
Sbjct: 61 TIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 607 GSADCTVKLWDV 618
S D +V +W+V
Sbjct: 121 CSRDKSVWIWEV 132
>UNIPROTKB|B4QFZ8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7240 "Drosophila simulans"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CM000362 OrthoDB:EOG45DV4X RefSeq:XP_002081558.1
UniGene:Dsi.12266 ProteinModelPortal:B4QFZ8
EnsemblMetazoa:FBtr0225561 GeneID:6734549 KEGG:dsi:Dsim_GD25651
FlyBase:FBgn0196936 Uniprot:B4QFZ8
Length = 335
Score = 276 (102.2 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 66/215 (30%), Positives = 101/215 (46%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA---NLVCYKGHNYPVWDVQ 470
+TL QGH G ++ ++ P G+ S D IR+WS N + GH + +++
Sbjct: 8 HTL-QGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIR 66
Query: 471 FNPQGHYFASSSHDRTARIWSMD--RIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
++P G Y AS+S D T IWS + + GH ++V V W + +AT S DK+
Sbjct: 67 WSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKS 126
Query: 529 VRLWDVSSG---ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA----SGRC 581
V +W+V+ EC + H + + P +AS D TI M+ C
Sbjct: 127 VWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDVLASASYDNTIKMFAEEPIDNDWDC 186
Query: 582 VTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
L HTS VW + + +G L S S D T+K+W
Sbjct: 187 TATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIW 221
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 42/132 (31%), Positives = 67/132 (50%)
Query: 492 MDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE-CVRIFI--GHRS 548
M R+ + GH + V WH N A+ DK +R+W ++ + + GH+
Sbjct: 1 MGRLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKR 60
Query: 549 MILSLAMSPDGRYMASGDEDGTIMMWDLASGR--CVTPLMGHTSCVWTLAYSCEGSLLAS 606
I + SP G+Y+AS D T +W +SG C L GH + V ++++S G LLA+
Sbjct: 61 TIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 607 GSADCTVKLWDV 618
S D +V +W+V
Sbjct: 121 CSRDKSVWIWEV 132
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 300 (110.7 bits), Expect = 3.9e-23, P = 3.9e-23
Identities = 66/214 (30%), Positives = 108/214 (50%)
Query: 411 KRSYTLYQ--GHSGPVYSASFSPLGDFIL-SSSADTTIRLWST-KLNANLVCYKGHNYPV 466
KR+Y L + HS V +L + D + LW+ K NA L Y GH+ +
Sbjct: 4 KRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLY-GHSSGI 62
Query: 467 WDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSD 526
V F+ A+ + T ++W ++ + +R + GH S+ V +H + A+GS D
Sbjct: 63 DSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLD 122
Query: 527 KTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLM 586
+++WD+ C+ + GH + L +PDGR++ SG ED + +WDL +G+ +
Sbjct: 123 TNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFK 182
Query: 587 GHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
H + +L + LLA+GSAD TVK WD+ T
Sbjct: 183 SHEGKIQSLDFHPHEFLLATGSADKTVKFWDLET 216
Score = 237 (88.5 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 66/240 (27%), Positives = 114/240 (47%)
Query: 382 KLGQQAVSSGLQGENDTTPREDIIG-PNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSS 440
K+G+++ + G D IG PN +LY GHS + S +F + + +
Sbjct: 23 KIGRKSSRVLVTGGEDHKVNLWAIGKPNA---ILSLY-GHSSGIDSVTFDASEGLVAAGA 78
Query: 441 ADTTIRLWSTKLNANLV-CYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLR 499
A TI+LW + A +V GH V F+P G +FAS S D +IW + + +
Sbjct: 79 ASGTIKLWDLE-EAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIH 137
Query: 500 IMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDG 559
GH V+ +R+ + +I +G D V++WD+++G+ + F H I SL P
Sbjct: 138 TYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHE 197
Query: 560 RYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKL--WD 617
+A+G D T+ WDL + + T+ V L ++ +G + G + ++K+ W+
Sbjct: 198 FLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQE-SLKIFSWE 256
Score = 135 (52.6 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 46/219 (21%), Positives = 95/219 (43%)
Query: 330 NRVHLSSAALPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDM--AKL---- 383
++V+L + P+ + + +G++ + LVA G + ++K+WD+ AK+
Sbjct: 39 HKVNLWAIGKPN-AILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTL 97
Query: 384 -GQQA--VSSGLQ--GENDTTPREDI---IGPNGRKRSYTLYQGHSGPVYSASFSPLGDF 435
G ++ VS GE + D I +K Y+GH+ V F+P G +
Sbjct: 98 TGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRW 157
Query: 436 ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRI 495
I+S D +++W L +K H + + F+P A+ S D+T + W ++
Sbjct: 158 IVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETF 217
Query: 496 QPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT-VRLWD 533
+ + + V C+ ++ + + G + + W+
Sbjct: 218 ELIGSGGTETTGVRCLTFNPDGKSVLCGLQESLKIFSWE 256
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 303 (111.7 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 70/172 (40%), Positives = 95/172 (55%)
Query: 451 KLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDC 510
K A L +GH+ VW V AS S D T R+W + + GH V
Sbjct: 691 KWGAELQTLEGHSNSVWAV--------LASGSDDETVRLWDPATGSLQQTLEGHSGWVLS 742
Query: 511 VRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT 570
V + + +A+GS DKTVRLWD ++G + GH + + S+A SPDGR +ASG D T
Sbjct: 743 VAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKT 802
Query: 571 IMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTST 622
+ +WD A+G L GH+ V ++A+S +G LLASGS D TV+LWD T T
Sbjct: 803 VRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGT 854
Score = 271 (100.5 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 65/197 (32%), Positives = 100/197 (50%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GHS V++ + S S D T+RLW + +GH+ V V F+P G
Sbjct: 700 EGHSNSVWAV--------LASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRL 751
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
AS S D+T R+W + + GH + V V + + +A+GS DKTVRLWD ++G
Sbjct: 752 LASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATG 811
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY 597
+ GH + S+A SPDGR +ASG D T+ +WD A+G L+ V L +
Sbjct: 812 SLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLI-IKGTVTELQF 870
Query: 598 SCEGSLLASGSADCTVK 614
S +GS +++ ++
Sbjct: 871 SQDGSYISTNLGSLNIQ 887
Score = 154 (59.3 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 47/175 (26%), Positives = 82/175 (46%)
Query: 364 SLVAGGFSDSSLKVWDMAKLGQQAVSSGLQG---ENDTTPREDIIGPNGRKRSYTLY--- 417
+++A G D ++++WD A Q G G +P ++ ++ L+
Sbjct: 708 AVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPA 767
Query: 418 --------QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
+GHS V S +FSP G + S S D T+RLW + +GH+ V V
Sbjct: 768 TGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSV 827
Query: 470 QFNPQGHYFASSSHDRTARIW--SMDRIQPLRIMAGHLSDVDCVRWHINCNYIAT 522
F+P G AS S D+T R+W + +Q I+ G ++++ ++ + +YI+T
Sbjct: 828 AFSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGTVTEL---QFSQDGSYIST 879
Score = 46 (21.3 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 151 HSLRHSKVNIKICQYSYELLLQ--YLHKTQSTKMLGIINE 188
H L+ S+V+ + L LQ +LH ++ +LG+I+E
Sbjct: 569 HHLKESQVSSSEIE-DVRLFLQKHFLHWVEAMCLLGLISE 607
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 255 (94.8 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 68/235 (28%), Positives = 116/235 (49%)
Query: 394 GENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLN 453
G +D D+ N K + L +GH+ V S + S G I SSS D+T+ LW +
Sbjct: 59 GLDDLVKVWDLQEDNTLKLRHKL-KGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSG 117
Query: 454 ANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDC-VR 512
+W VQF+P Y S +D ++S++ + + + +
Sbjct: 118 DKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIA 177
Query: 513 WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIM 572
+ + YIA+G+ D + ++DV++G+ V+ GH + SL SP+ + + + +DG +
Sbjct: 178 YSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMK 237
Query: 573 MWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
++D+ V L GH S V +A+S +G AS S+D +VK+WD T+ K L T
Sbjct: 238 LYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWD-TSERKCLHT 291
Score = 238 (88.8 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 56/200 (28%), Positives = 98/200 (49%)
Query: 422 GPV--YSASFSPLGDFILSSSADTTIRLWST---KLNANLVCYKGHNYPVWDVQFNPQGH 476
GPV ++ FSP +++S D I ++S K L G Y + + ++P G
Sbjct: 126 GPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNG-KYTL-SIAYSPDGK 183
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
Y AS + D I+ + + ++ + GH V + + N + T S D ++L+DV+
Sbjct: 184 YIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTH 243
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+ V GH S +L +A S DG++ AS D ++ +WD + +C+ HT VW +
Sbjct: 244 SDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVR 303
Query: 597 YSCEGSLLASGSADCTVKLW 616
YS +AS S D ++ ++
Sbjct: 304 YSPGNDKVASASEDKSLNIY 323
Score = 233 (87.1 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 62/196 (31%), Positives = 100/196 (51%)
Query: 434 DFILSSSADTTIRLWSTKLNANLVC---YKGHNYPVWDVQFNPQGHYFASSSHDRTARIW 490
DF+++ D +++W + + L KGH V V + G ASSS D T +W
Sbjct: 53 DFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLW 112
Query: 491 SMDRIQPLRIMAGHLSDVDCVRWHINCN-YIATGSSDKTVRLWDVSSGECVRIFIGHRSM 549
+++ D+ V++ CN Y+ +G +D + ++ V +G+ +
Sbjct: 113 DARSGDKKHLLSFGPVDLWTVQFS-PCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGK 171
Query: 550 I-LSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGS 608
LS+A SPDG+Y+ASG DG I ++D+A+G+ V L GH V +L +S LL + S
Sbjct: 172 YTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTAS 231
Query: 609 ADCTVKLWDVTTSTKV 624
D +KL+DVT S V
Sbjct: 232 DDGHMKLYDVTHSDVV 247
Score = 200 (75.5 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 61/238 (25%), Positives = 112/238 (47%)
Query: 353 GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQA--VSSG---LQGENDTTPREDII-G 406
G+ ++S DG +A DS++ +WD A+ G + +S G L + + +I G
Sbjct: 87 GVVSVAVSSDGQTIASSSLDSTMCLWD-ARSGDKKHLLSFGPVDLWTVQFSPCNKYVISG 145
Query: 407 PNGRKRS-YTLYQG--------HSGP-VYSASFSPLGDFILSSSADTTIRLWSTKLNANL 456
N K S Y++ G +G S ++SP G +I S + D I ++ +
Sbjct: 146 LNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVV 205
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN 516
+GH PV + F+P ++S D +++ + + ++GH S V CV + +
Sbjct: 206 QTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSED 265
Query: 517 CNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
+ A+ SSD +V++WD S +C+ F H + + SP +AS ED ++ ++
Sbjct: 266 GKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
Score = 154 (59.3 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 42/157 (26%), Positives = 74/157 (47%)
Query: 477 YFASSSHDRTARIWSMDRIQPLRI---MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
+ + D ++W + L++ + GH V V + IA+ S D T+ LWD
Sbjct: 54 FLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWD 113
Query: 534 VSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS-CV 592
SG+ + + ++ SP +Y+ SG DG I M+ + +G+ L
Sbjct: 114 ARSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYT 173
Query: 593 WTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEE 629
++AYS +G +ASG+ D + ++DV KV++T E
Sbjct: 174 LSIAYSPDGKYIASGAIDGIITIFDVAAG-KVVQTLE 209
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 31/118 (26%), Positives = 58/118 (49%)
Query: 518 NYIATGSSDKTVRLWDVSSGECVRI---FIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
+++ TG D V++WD+ +++ GH ++S+A+S DG+ +AS D T+ +W
Sbjct: 53 DFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLW 112
Query: 575 DLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
D SG L +WT+ +S + SG D + ++ V T + ++G
Sbjct: 113 DARSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNG 170
Score = 44 (20.5 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 365 LVAGGFSDSSLKVWDM 380
LV GG D +KVWD+
Sbjct: 55 LVTGGLDDL-VKVWDL 69
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 296 (109.3 bits), Expect = 5.9e-23, Sum P(2) = 5.9e-23
Identities = 65/219 (29%), Positives = 108/219 (49%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQ 474
TL Q H GP+++ ++ G+FILS+ D T +W + H+ P DV +
Sbjct: 261 TLGQ-HKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-S 318
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDV 534
+ FAS S D + + + +P++ GH ++V+ ++W N +A+ S D T+++W +
Sbjct: 319 NNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM 378
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGR---------YMASGDEDGTIMMWDLASGRCVTPL 585
CV H I ++ SP G +AS D T+ +WD+ G C+ L
Sbjct: 379 KQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTL 438
Query: 586 MGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
H V+++A+S +G LASGS D V +W+ T V
Sbjct: 439 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALV 477
Score = 257 (95.5 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 60/208 (28%), Positives = 103/208 (49%)
Query: 420 HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFA 479
HS P + F S S D I + + + ++GH V ++++P G+ A
Sbjct: 307 HSAPALDVDWQSNNTFA-SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLA 365
Query: 480 SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW--------HINCNY-IATGSSDKTVR 530
S S D T +IWSM + + + H ++ ++W + N N +A+ S D TVR
Sbjct: 366 SCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVR 425
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
LWDV G C+ H+ + S+A SPDGRY+ASG D + +W+ +G V G T
Sbjct: 426 LWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TG 484
Query: 591 CVWTLAYSCEGSLLASGSADCTVKLWDV 618
++ + ++ G + + ++D +V + D+
Sbjct: 485 GIFEVCWNAAGDKVGASASDGSVCVLDL 512
Score = 237 (88.5 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 66/241 (27%), Positives = 114/241 (47%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNAN-----LV---CYK--GHNYP-- 465
+GH V+ +++P+ D + S S D+T R+W+ N+ LV C + G + P
Sbjct: 166 RGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSN 225
Query: 466 --VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATG 523
V + +N +G A+ S+D ARIW+ D + H + ++W+ N+I +
Sbjct: 226 KDVTSLDWNSEGTLLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKKGNFILSA 284
Query: 524 SSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVT 583
DKT +WD +GE + F H + L + + + AS D I + L R +
Sbjct: 285 GVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPIK 343
Query: 584 PLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLP 643
GHT+ V + + G+LLAS S D T+K+W + V + ++ + ++K P
Sbjct: 344 TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCV--HDLQAHNKEIYTIKWSP 401
Query: 644 T 644
T
Sbjct: 402 T 402
Score = 224 (83.9 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 68/265 (25%), Positives = 122/265 (46%)
Query: 365 LVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTT-PREDIIGPNGRKRSYTLYQGHSGP 423
L+A G DS+ ++W+++ EN T+ P + ++ R+ +
Sbjct: 183 LLASGSGDSTARIWNLS-------------ENSTSGPTQLVLRHCIREGGQDVPSNKD-- 227
Query: 424 VYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKG-HNYPVWDVQFNPQGHYFASSS 482
V S ++ G + + S D R+W TK + NL G H P++ +++N +G++ S+
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIW-TK-DGNLASTLGQHKGPIFALKWNKKGNFILSAG 285
Query: 483 HDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRI 542
D+T IW + + H + V W N N A+ S+D + + + ++
Sbjct: 286 VDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSN-NTFASCSTDMCIHVCKLGQDRPIKT 344
Query: 543 FIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS 602
F GH + + ++ P G +AS +D T+ +W + CV L H ++T+ +S G
Sbjct: 345 FQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGP 404
Query: 603 ---------LLASGSADCTVKLWDV 618
+LAS S D TV+LWDV
Sbjct: 405 GTNNPNANLMLASASFDSTVRLWDV 429
Score = 204 (76.9 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 48/177 (27%), Positives = 87/177 (49%)
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
G+ R +QGH+ V + + P G+ + S S D T+++WS K + + + HN ++
Sbjct: 337 GQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYT 396
Query: 469 VQFNPQGH---------YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
++++P G AS+S D T R+W +DR + + H V V + + Y
Sbjct: 397 IKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRY 456
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
+A+GS DK V +W+ +G V + G I + + G + + DG++ + DL
Sbjct: 457 LASGSFDKCVHIWNTQTGALVHSYRGTGG-IFEVCWNAAGDKVGASASDGSVCVLDL 512
Score = 151 (58.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 50/202 (24%), Positives = 84/202 (41%)
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQ---PLRIMAGHL-------- 505
V +GH V+ +NP AS S D TARIW++ P +++ H
Sbjct: 163 VVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDV 222
Query: 506 ---SDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYM 562
DV + W+ +ATGS D R+W G H+ I +L + G ++
Sbjct: 223 PSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKGNFI 281
Query: 563 ASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTST 622
S D T ++WD +G H++ + + + AS S D + + +
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQD- 339
Query: 623 KVLKTEEKSGTNRLRSLKTLPT 644
+ +KT + TN + ++K PT
Sbjct: 340 RPIKTFQ-GHTNEVNAIKWDPT 360
Score = 39 (18.8 bits), Expect = 5.9e-23, Sum P(2) = 5.9e-23
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 7 VEF-VATYLKKKGFSEAENALQAEIQRNKSSNNTN 40
V F V YL++ GFS + A I+ + S +N N
Sbjct: 8 VNFLVYRYLQESGFSHS--AFTFGIESHISQSNIN 40
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 296 (109.3 bits), Expect = 5.9e-23, Sum P(2) = 5.9e-23
Identities = 65/219 (29%), Positives = 108/219 (49%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQ 474
TL Q H GP+++ ++ G+FILS+ D T +W + H+ P DV +
Sbjct: 261 TLGQ-HKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-S 318
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDV 534
+ FAS S D + + + +P++ GH ++V+ ++W N +A+ S D T+++W +
Sbjct: 319 NNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM 378
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGR---------YMASGDEDGTIMMWDLASGRCVTPL 585
CV H I ++ SP G +AS D T+ +WD+ G C+ L
Sbjct: 379 KQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTL 438
Query: 586 MGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
H V+++A+S +G LASGS D V +W+ T V
Sbjct: 439 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALV 477
Score = 257 (95.5 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 60/208 (28%), Positives = 103/208 (49%)
Query: 420 HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFA 479
HS P + F S S D I + + + ++GH V ++++P G+ A
Sbjct: 307 HSAPALDVDWQSNNTFA-SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLA 365
Query: 480 SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW--------HINCNY-IATGSSDKTVR 530
S S D T +IWSM + + + H ++ ++W + N N +A+ S D TVR
Sbjct: 366 SCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVR 425
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
LWDV G C+ H+ + S+A SPDGRY+ASG D + +W+ +G V G T
Sbjct: 426 LWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TG 484
Query: 591 CVWTLAYSCEGSLLASGSADCTVKLWDV 618
++ + ++ G + + ++D +V + D+
Sbjct: 485 GIFEVCWNAAGDKVGASASDGSVCVLDL 512
Score = 237 (88.5 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 66/241 (27%), Positives = 114/241 (47%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNAN-----LV---CYK--GHNYP-- 465
+GH V+ +++P+ D + S S D+T R+W+ N+ LV C + G + P
Sbjct: 166 RGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSN 225
Query: 466 --VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATG 523
V + +N +G A+ S+D ARIW+ D + H + ++W+ N+I +
Sbjct: 226 KDVTSLDWNSEGTLLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKKGNFILSA 284
Query: 524 SSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVT 583
DKT +WD +GE + F H + L + + + AS D I + L R +
Sbjct: 285 GVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPIK 343
Query: 584 PLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLP 643
GHT+ V + + G+LLAS S D T+K+W + V + ++ + ++K P
Sbjct: 344 TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCV--HDLQAHNKEIYTIKWSP 401
Query: 644 T 644
T
Sbjct: 402 T 402
Score = 224 (83.9 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 68/265 (25%), Positives = 122/265 (46%)
Query: 365 LVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTT-PREDIIGPNGRKRSYTLYQGHSGP 423
L+A G DS+ ++W+++ EN T+ P + ++ R+ +
Sbjct: 183 LLASGSGDSTARIWNLS-------------ENSTSGPTQLVLRHCIREGGQDVPSNKD-- 227
Query: 424 VYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKG-HNYPVWDVQFNPQGHYFASSS 482
V S ++ G + + S D R+W TK + NL G H P++ +++N +G++ S+
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIW-TK-DGNLASTLGQHKGPIFALKWNKKGNFILSAG 285
Query: 483 HDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRI 542
D+T IW + + H + V W N N A+ S+D + + + ++
Sbjct: 286 VDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSN-NTFASCSTDMCIHVCKLGQDRPIKT 344
Query: 543 FIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS 602
F GH + + ++ P G +AS +D T+ +W + CV L H ++T+ +S G
Sbjct: 345 FQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGP 404
Query: 603 ---------LLASGSADCTVKLWDV 618
+LAS S D TV+LWDV
Sbjct: 405 GTNNPNANLMLASASFDSTVRLWDV 429
Score = 204 (76.9 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 48/177 (27%), Positives = 87/177 (49%)
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
G+ R +QGH+ V + + P G+ + S S D T+++WS K + + + HN ++
Sbjct: 337 GQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYT 396
Query: 469 VQFNPQGH---------YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
++++P G AS+S D T R+W +DR + + H V V + + Y
Sbjct: 397 IKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRY 456
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
+A+GS DK V +W+ +G V + G I + + G + + DG++ + DL
Sbjct: 457 LASGSFDKCVHIWNTQTGALVHSYRGTGG-IFEVCWNAAGDKVGASASDGSVCVLDL 512
Score = 151 (58.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 50/202 (24%), Positives = 84/202 (41%)
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQ---PLRIMAGHL-------- 505
V +GH V+ +NP AS S D TARIW++ P +++ H
Sbjct: 163 VVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDV 222
Query: 506 ---SDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYM 562
DV + W+ +ATGS D R+W G H+ I +L + G ++
Sbjct: 223 PSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKGNFI 281
Query: 563 ASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTST 622
S D T ++WD +G H++ + + + AS S D + + +
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQD- 339
Query: 623 KVLKTEEKSGTNRLRSLKTLPT 644
+ +KT + TN + ++K PT
Sbjct: 340 RPIKTFQ-GHTNEVNAIKWDPT 360
Score = 39 (18.8 bits), Expect = 5.9e-23, Sum P(2) = 5.9e-23
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 7 VEF-VATYLKKKGFSEAENALQAEIQRNKSSNNTN 40
V F V YL++ GFS + A I+ + S +N N
Sbjct: 8 VNFLVYRYLQESGFSHS--AFTFGIESHISQSNIN 40
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 296 (109.3 bits), Expect = 5.9e-23, Sum P(2) = 5.9e-23
Identities = 65/219 (29%), Positives = 108/219 (49%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQ 474
TL Q H GP+++ ++ G+FILS+ D T +W + H+ P DV +
Sbjct: 261 TLGQ-HKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-S 318
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDV 534
+ FAS S D + + + +P++ GH ++V+ ++W N +A+ S D T+++W +
Sbjct: 319 NNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM 378
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGR---------YMASGDEDGTIMMWDLASGRCVTPL 585
CV H I ++ SP G +AS D T+ +WD+ G C+ L
Sbjct: 379 KQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTL 438
Query: 586 MGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
H V+++A+S +G LASGS D V +W+ T V
Sbjct: 439 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALV 477
Score = 257 (95.5 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 60/208 (28%), Positives = 103/208 (49%)
Query: 420 HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFA 479
HS P + F S S D I + + + ++GH V ++++P G+ A
Sbjct: 307 HSAPALDVDWQSNNTFA-SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLA 365
Query: 480 SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW--------HINCNY-IATGSSDKTVR 530
S S D T +IWSM + + + H ++ ++W + N N +A+ S D TVR
Sbjct: 366 SCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVR 425
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
LWDV G C+ H+ + S+A SPDGRY+ASG D + +W+ +G V G T
Sbjct: 426 LWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TG 484
Query: 591 CVWTLAYSCEGSLLASGSADCTVKLWDV 618
++ + ++ G + + ++D +V + D+
Sbjct: 485 GIFEVCWNAAGDKVGASASDGSVCVLDL 512
Score = 239 (89.2 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 67/241 (27%), Positives = 114/241 (47%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLW-----STKLNANLV---CYK--GHNYP-- 465
+GH V+ +++P+ D + S S D+T R+W ST + LV C + G + P
Sbjct: 166 RGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSN 225
Query: 466 --VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATG 523
V + +N +G A+ S+D ARIW+ D + H + ++W+ N+I +
Sbjct: 226 KDVTSLDWNSEGTLLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKKGNFILSA 284
Query: 524 SSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVT 583
DKT +WD +GE + F H + L + + + AS D I + L R +
Sbjct: 285 GVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPIK 343
Query: 584 PLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLP 643
GHT+ V + + G+LLAS S D T+K+W + V + ++ + ++K P
Sbjct: 344 TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCV--HDLQAHNKEIYTIKWSP 401
Query: 644 T 644
T
Sbjct: 402 T 402
Score = 222 (83.2 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 67/264 (25%), Positives = 119/264 (45%)
Query: 365 LVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPV 424
L+A G DS+ ++W++++ + G R I R+ + V
Sbjct: 183 LLASGSGDSTARIWNLSE-------NSTSGSTQLVLRHCI-----REGGQDVPSNKD--V 228
Query: 425 YSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKG-HNYPVWDVQFNPQGHYFASSSH 483
S ++ G + + S D R+W TK + NL G H P++ +++N +G++ S+
Sbjct: 229 TSLDWNSEGTLLATGSYDGFARIW-TK-DGNLASTLGQHKGPIFALKWNKKGNFILSAGV 286
Query: 484 DRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIF 543
D+T IW + + H + V W N N A+ S+D + + + ++ F
Sbjct: 287 DKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSN-NTFASCSTDMCIHVCKLGQDRPIKTF 345
Query: 544 IGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS- 602
GH + + ++ P G +AS +D T+ +W + CV L H ++T+ +S G
Sbjct: 346 QGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPG 405
Query: 603 --------LLASGSADCTVKLWDV 618
+LAS S D TV+LWDV
Sbjct: 406 TNNPNANLMLASASFDSTVRLWDV 429
Score = 204 (76.9 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 48/177 (27%), Positives = 87/177 (49%)
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
G+ R +QGH+ V + + P G+ + S S D T+++WS K + + + HN ++
Sbjct: 337 GQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYT 396
Query: 469 VQFNPQGH---------YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
++++P G AS+S D T R+W +DR + + H V V + + Y
Sbjct: 397 IKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRY 456
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
+A+GS DK V +W+ +G V + G I + + G + + DG++ + DL
Sbjct: 457 LASGSFDKCVHIWNTQTGALVHSYRGTGG-IFEVCWNAAGDKVGASASDGSVCVLDL 512
Score = 143 (55.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 49/202 (24%), Positives = 83/202 (41%)
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQP---LRIMAGHL-------- 505
V +GH V+ +NP AS S D TARIW++ +++ H
Sbjct: 163 VVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDV 222
Query: 506 ---SDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYM 562
DV + W+ +ATGS D R+W G H+ I +L + G ++
Sbjct: 223 PSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKGNFI 281
Query: 563 ASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTST 622
S D T ++WD +G H++ + + + AS S D + + +
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQD- 339
Query: 623 KVLKTEEKSGTNRLRSLKTLPT 644
+ +KT + TN + ++K PT
Sbjct: 340 RPIKTFQ-GHTNEVNAIKWDPT 360
Score = 39 (18.8 bits), Expect = 5.9e-23, Sum P(2) = 5.9e-23
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 7 VEF-VATYLKKKGFSEAENALQAEIQRNKSSNNTN 40
V F V YL++ GFS + A I+ + S +N N
Sbjct: 8 VNFLVYRYLQESGFSHS--AFTFGIESHISQSNIN 40
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 282 (104.3 bits), Expect = 6.3e-23, P = 6.3e-23
Identities = 64/202 (31%), Positives = 107/202 (52%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
+ HS PV ++SP G+ + S+ D T+++W KL + H+ V V F+ GH
Sbjct: 56 FASHSAPVNGVAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGH 115
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
++S D++A+IW + R Q + A + V ++ N +AT S DK+VR++DV S
Sbjct: 116 LMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDS 175
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
GECVR F R+ LA P G +A I ++D++ + + + H++ V +A
Sbjct: 176 GECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVA 235
Query: 597 YSCEGSLLASGSADCTVKLWDV 618
+ G L SGS D T+++ D+
Sbjct: 236 FHPSGHFLLSGSDDRTIRILDL 257
Score = 267 (99.0 bits), Expect = 9.6e-21, P = 9.6e-21
Identities = 60/205 (29%), Positives = 103/205 (50%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
+ GHSG + F P G I +SS D+T+ LW+ A + + H+ PV V ++P+G+
Sbjct: 14 FTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGN 73
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
AS+ HDRT +IW H V V + + + T S DK+ ++W V+
Sbjct: 74 LVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVAR 133
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+ V F + + S SP+G+ +A+ +D ++ ++D+ SG CV + LA
Sbjct: 134 RQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLA 193
Query: 597 YSCEGSLLASGSADCTVKLWDVTTS 621
+ G++LA +K++DV+ S
Sbjct: 194 WHPWGNMLAVALGCNRIKIFDVSGS 218
Score = 204 (76.9 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 46/179 (25%), Positives = 88/179 (49%)
Query: 459 YKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCN 518
+ GH+ + ++F P G A+SS D T +W++++ A H + V+ V W N
Sbjct: 14 FTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGN 73
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
+A+ D+TV++W+ F+ H + S+ G M + +D + +W +A
Sbjct: 74 LVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVAR 133
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLK-TEEKSGTNRL 636
+ V+ + V + +S G L+A+ S D +V+++DV + V TEE++ +L
Sbjct: 134 RQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQL 192
Score = 178 (67.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 56/240 (23%), Positives = 111/240 (46%)
Query: 350 THNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLG--------QQAVSS---GLQGEND 397
+H+ +N + S G+LVA D ++K+W+ G +AV S G
Sbjct: 58 SHSAPVNGVAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLM 117
Query: 398 TTPREDI---IGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
T +D I R++ + + + V SA FSP G + ++S D ++R++
Sbjct: 118 LTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGE 177
Query: 455 NLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
+ + + ++P G+ A + +I+ + Q L++ H + V+ V +H
Sbjct: 178 CVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFH 237
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
+ +++ +GS D+T+R+ D+ G + GH + ++A S DG A+G D +++W
Sbjct: 238 PSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVW 297
Score = 168 (64.2 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 54/204 (26%), Positives = 87/204 (42%)
Query: 347 FINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIG 406
F+ + G L+ D S K+W +A+ +Q VSS Q N R
Sbjct: 98 FVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVAR--RQFVSSFAQQNNWV--RSAKFS 153
Query: 407 PNGR-------KRSYTLYQGHSGPVYSA-----------SFSPLGDFILSSSADTTIRLW 448
PNG+ +S +Y SG ++ P G+ + + I+++
Sbjct: 154 PNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIF 213
Query: 449 STKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDV 508
+ L Y H+ PV DV F+P GH+ S S DRT RI + +P+ + GH V
Sbjct: 214 DVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAV 273
Query: 509 DCVRWHINCNYIATGSSDKTVRLW 532
+ V + + + ATG SD+ + +W
Sbjct: 274 NAVAFSRDGDKFATGGSDRQLLVW 297
Score = 159 (61.0 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 41/146 (28%), Positives = 71/146 (48%)
Query: 499 RIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS-SGECVRIFIGHRSMILSLAMSP 557
R GH + +R+ + IAT S+D TV LW+++ + C+R F H + + +A SP
Sbjct: 12 RHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIR-FASHSAPVNGVAWSP 70
Query: 558 DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
G +AS D T+ +W+ + H+ V ++ + G L+ + S D + K+W
Sbjct: 71 KGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWR 130
Query: 618 VTTSTKVLKTEEKSGTNRLRSLKTLP 643
V V +++ N +RS K P
Sbjct: 131 VARRQFVSSFAQQN--NWVRSAKFSP 154
Score = 124 (48.7 bits), Expect = 0.00017, P = 0.00017
Identities = 47/163 (28%), Positives = 68/163 (41%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPRE--- 402
+F +N + A S +G LVA D S++++D+ G+ V + E PR+
Sbjct: 139 SFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDS-GE-CVRTFT--EERAAPRQLAW 194
Query: 403 --------DIIGPNGRK-------RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRL 447
+G N K + LY HS PV +F P G F+LS S D TIR+
Sbjct: 195 HPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRI 254
Query: 448 WSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIW 490
+ GH V V F+ G FA+ DR +W
Sbjct: 255 LDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVW 297
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 295 (108.9 bits), Expect = 6.7e-23, P = 6.7e-23
Identities = 64/215 (29%), Positives = 109/215 (50%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQG 475
++ GH +YS FS G FI+S S D T RLW + ++ + N V + +P
Sbjct: 397 VFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIEN-GVTAIAISPND 455
Query: 476 HYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS 535
+ A S D+ R+WS+ R+ GH V + + + + + +GS DKT+++W++
Sbjct: 456 QFIAVGSLDQIIRVWSVSGTLVERL-EGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQ 514
Query: 536 S------------GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVT 583
+ G C + GH +LS+A+SPD R+ SG +D ++ WDL +G+
Sbjct: 515 ATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYL 574
Query: 584 PLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
GH + V ++ +S +G ASGS D ++W +
Sbjct: 575 TCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSI 609
Score = 278 (102.9 bits), Expect = 5.1e-21, P = 5.1e-21
Identities = 69/232 (29%), Positives = 112/232 (48%)
Query: 411 KRSYTLYQGHSGP-----VYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
K+ +TL++ P V + +FSP G ++++ + D I+LW + GH
Sbjct: 345 KKLFTLHEESPDPSRDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQD 404
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
++ + F+ G + S S DRTAR+W ++ Q + + + V + N +IA GS
Sbjct: 405 IYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIE-NGVTAIAISPNDQFIAVGSL 463
Query: 526 DKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR----- 580
D+ +R+W VS G V GH+ + S+A SPD + SG D TI +W+L + R
Sbjct: 464 DQIIRVWSVS-GTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLS 522
Query: 581 -------CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
C GHT V ++A S + SGS D +++ WD+ T L
Sbjct: 523 AIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYL 574
Score = 213 (80.0 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 50/157 (31%), Positives = 88/157 (56%)
Query: 488 RIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGH- 546
R+++++ + L H S V CV++ N Y+ATG + + ++DV +G+ ++F H
Sbjct: 300 RVFNINLVHTLE----HPSVVCCVKFSNNGKYLATGCN-QAANVFDVQTGK--KLFTLHE 352
Query: 547 ------RSM-ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSC 599
R + + ++A SPDG+Y+ +G ED I +WDL++ + GH +++L +S
Sbjct: 353 ESPDPSRDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSH 412
Query: 600 EGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRL 636
G + SGS D T +LWDV T +LK E ++G +
Sbjct: 413 NGRFIVSGSGDRTARLWDVETGQCILKLEIENGVTAI 449
Score = 198 (74.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 53/182 (29%), Positives = 90/182 (49%)
Query: 453 NANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSD----- 507
N NLV H V V+F+ G Y A+ + + A ++ + + L + D
Sbjct: 303 NINLVHTLEHPSVVCCVKFSNNGKYLATGCN-QAANVFDVQTGKKLFTLHEESPDPSRDL 361
Query: 508 -VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGD 566
V + + + Y+ TG+ D+ ++LWD+S+ + +F GH I SL S +GR++ SG
Sbjct: 362 YVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGS 421
Query: 567 EDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLK 626
D T +WD+ +G+C+ L V +A S +A GS D +++W V+ T V +
Sbjct: 422 GDRTARLWDVETGQCILKLEIENG-VTAIAISPNDQFIAVGSLDQIIRVWSVS-GTLVER 479
Query: 627 TE 628
E
Sbjct: 480 LE 481
Score = 165 (63.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 48/141 (34%), Positives = 68/141 (48%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGR-KRSYTL 416
+ S D S++ G D ++KVW++ Q S GL I P G K +YT
Sbjct: 491 AFSPDSSILLSGSLDKTIKVWEL----QATRSVGLSA----------IKPEGICKATYT- 535
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
GH+ V S + SP + LS S D +++ W + + + +GH V V F+P G
Sbjct: 536 --GHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGR 593
Query: 477 YFASSSHDRTARIWSMDRIQP 497
FAS S D ARIWS+D P
Sbjct: 594 QFASGSGDLRARIWSIDPASP 614
Score = 122 (48.0 bits), Expect = 0.00057, P = 0.00057
Identities = 40/159 (25%), Positives = 69/159 (43%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGEN---DTTPREDIIGPNGRKRSY 414
+ S DG + G D +K+WD++ + V SG + + D + I R+
Sbjct: 367 AFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTA 426
Query: 415 TLYQGHSGP----------VYSASFSPLGDFILSSSADTTIRLWSTKLNANLV-CYKGHN 463
L+ +G V + + SP FI S D IR+WS ++ LV +GH
Sbjct: 427 RLWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWS--VSGTLVERLEGHK 484
Query: 464 YPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMA 502
V+ + F+P S S D+T ++W + + + + A
Sbjct: 485 ESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSA 523
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 272 (100.8 bits), Expect = 9.5e-23, P = 9.5e-23
Identities = 71/249 (28%), Positives = 114/249 (45%)
Query: 380 MAKLGQQAVSSGLQGENDTTPREDIIGP--NGRKRSYTL------YQGHSGPVYSASFSP 431
M++ + A+S E T P GP NG+ R+ +L GH VY+ F+P
Sbjct: 4 MSRENETALSGPRPMEWSTVPHSASQGPGPNGKNRTSSLEAPIMLLSGHPSAVYTMKFNP 63
Query: 432 LGDFILSSSADTTIRLWSTKLNA-NLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIW 490
G I S S D I LW + N + KGH + D+ + G S+S D+T R W
Sbjct: 64 AGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAW 123
Query: 491 SMDRIQPLRIMAGHLSDVD-CVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSM 549
++ + ++ MA H S V+ C I +GS D T +LWD+ ++ F +
Sbjct: 124 DVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTF-PDKYQ 182
Query: 550 ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSA 609
I +++ S + +G D + +WDL G L GH + ++ S +GS L +
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGM 242
Query: 610 DCTVKLWDV 618
D + +WD+
Sbjct: 243 DNKLCVWDM 251
Score = 233 (87.1 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 58/235 (24%), Positives = 107/235 (45%)
Query: 408 NGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVW 467
+G +++ + +GH + ++ G I+S+S D T+R W + + H+ V
Sbjct: 83 HGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVN 142
Query: 468 DVQFNPQGH-YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSD 526
+G S S D TA++W M + ++ + V + + I TG D
Sbjct: 143 SCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVD 201
Query: 527 KTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA----SGRCV 582
V++WD+ GE GH+ I +++SPDG Y+ + D + +WD+ RCV
Sbjct: 202 NDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCV 261
Query: 583 TPLMGHT----SCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGT 633
GH + ++S +G+ + +GS+D V +WD T+ + K +G+
Sbjct: 262 KIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGS 316
Score = 219 (82.2 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 50/187 (26%), Positives = 88/187 (47%)
Query: 449 STKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDR-IQPLRIMAGHLSD 507
++ L A ++ GH V+ ++FNP G AS SHDR +W + + ++ GH +
Sbjct: 39 TSSLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNA 98
Query: 508 VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR-YMASGD 566
+ + W + + I + S DKTVR WDV +G+ ++ H S + S + G + SG
Sbjct: 99 ILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGS 158
Query: 567 EDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLK 626
+DGT +WD+ + + +++S + +G D VK+WD+ +
Sbjct: 159 DDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMT 217
Query: 627 TEEKSGT 633
E T
Sbjct: 218 LEGHQDT 224
Score = 187 (70.9 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 50/208 (24%), Positives = 89/208 (42%)
Query: 420 HSGPVYSASFSPLGD-FILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
HS V S + G I+S S D T +LW + + + Y + V F+
Sbjct: 137 HSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDAADKI 195
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS--- 535
+ D ++W + + + + GH + + + +Y+ T D + +WD+
Sbjct: 196 FTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYA 255
Query: 536 -SGECVRIFIGHR----SMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
CV+IF GH+ +L + SPDG + +G D + +WD S R + L GHT
Sbjct: 256 PQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTG 315
Query: 591 CVWTLAYSCEGSLLASGSADCTVKLWDV 618
V + ++ S S+D + L ++
Sbjct: 316 SVNECVFHPTEPIIGSCSSDKNIYLGEI 343
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 272 (100.8 bits), Expect = 9.5e-23, P = 9.5e-23
Identities = 68/211 (32%), Positives = 104/211 (49%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLW----STKLNANLVCYKGHNYPVWDVQFNPQ 474
GH G + A + P G+ + + D TIR+W S + A V GH+ + DV ++P
Sbjct: 12 GHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTIRDVAWSPC 71
Query: 475 GHYFASSSHDRTARIWSMD--RIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLW 532
G Y AS+S D T IW + + GH ++V V W + + +AT S DK+V +W
Sbjct: 72 GQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLATCSRDKSVWVW 131
Query: 533 DVSSG---ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW--DLASG--RCVTPL 585
+V+ EC + H + + P +AS D TI ++ DLA L
Sbjct: 132 EVAQEDEYECAAVLNTHTQDVKKVEWHPHEDILASASYDNTIKLYKEDLADSDWSSFDTL 191
Query: 586 MGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
+ H S VW++++ G+ LAS S D TVK+W
Sbjct: 192 VSHESTVWSISFDGSGNRLASCSDDQTVKIW 222
Score = 220 (82.5 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 53/170 (31%), Positives = 83/170 (48%)
Query: 456 LVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQ---PLRIMA-GHLSDVDCV 511
L C GH W ++P+G+ A+ D+T RIW+ D Q +++ GH + V
Sbjct: 7 LQCLTGHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTIRDV 66
Query: 512 RWHINCNYIATGSSDKTVRLWDVSSGE--CVRIFIGHRSMILSLAMSPDGRYMASGDEDG 569
W Y+A+ S D TV +WD SGE C GH + + S++ S G +A+ D
Sbjct: 67 AWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLATCSRDK 126
Query: 570 TIMMWDLASG---RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
++ +W++A C L HT V + + +LAS S D T+KL+
Sbjct: 127 SVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHEDILASASYDNTIKLY 176
Score = 204 (76.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 48/133 (36%), Positives = 72/133 (54%)
Query: 492 MDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLW--DVSSGECVRIFI--GHR 547
M +++ L+ + GH WH N +AT DKT+R+W D S + + GH
Sbjct: 1 MGKLELLQCLTGHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHS 60
Query: 548 SMILSLAMSPDGRYMASGDEDGTIMMWDLASGR--CVTPLMGHTSCVWTLAYSCEGSLLA 605
I +A SP G+Y+AS D T+ +WD SG C L GH + V ++++S GSLLA
Sbjct: 61 RTIRDVAWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLA 120
Query: 606 SGSADCTVKLWDV 618
+ S D +V +W+V
Sbjct: 121 TCSRDKSVWVWEV 133
Score = 203 (76.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 45/169 (26%), Positives = 83/169 (49%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVC---YKGHNYPVWDVQFN 472
L GHS + ++SP G ++ S+S D T+ +W K + C +GH V V ++
Sbjct: 55 LSDGHSRTIRDVAWSPCGQYLASASFDATVAIWDKK-SGEFECNATLEGHENEVKSVSWS 113
Query: 473 PQGHYFASSSHDRTARIWSM---DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
G A+ S D++ +W + D + ++ H DV V WH + + +A+ S D T+
Sbjct: 114 KSGSLLATCSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHEDILASASYDNTI 173
Query: 530 RLW--DVSSGECVRI--FIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
+L+ D++ + + H S + S++ G +AS +D T+ +W
Sbjct: 174 KLYKEDLADSDWSSFDTLVSHESTVWSISFDGSGNRLASCSDDQTVKIW 222
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 272 (100.8 bits), Expect = 9.5e-23, P = 9.5e-23
Identities = 62/227 (27%), Positives = 108/227 (47%)
Query: 405 IGPNGR--KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGH 462
I P GR R+ +GH +Y+ + ++S+S D + +W + +
Sbjct: 37 IDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLR 96
Query: 463 NYPVWDVQFNPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSDVDCVRWHINCN 518
+ V + P G+Y A D I+S+ ++ R +AGH + C R+ ++ N
Sbjct: 97 SSWVMTCAYAPSGNYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRF-LDDN 155
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
I T S D T LWD+ +G+ F GH ++SL+++PD R SG D + +WD+
Sbjct: 156 QIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIRE 215
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
G C GH S + + + G+ A+GS D T +L+D+ +++
Sbjct: 216 GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Score = 246 (91.7 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 61/203 (30%), Positives = 100/203 (49%)
Query: 419 GHSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH+G + F L D I++SS DTT LW + + GH V + P
Sbjct: 141 GHTGYLSCCRF--LDDNQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRL 198
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
F S + D +A++W + + GH SD++ + + N N ATGS D T RL+D+ +
Sbjct: 199 FVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD 258
Query: 538 ECVRIFIGHRSMIL---SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ + ++ H ++I S+A S GR + +G +D +WD L GH + V
Sbjct: 259 QELMVY-SHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSC 317
Query: 595 LAYSCEGSLLASGSADCTVKLWD 617
L + +G +A+GS D +K+W+
Sbjct: 318 LGVTDDGMAVATGSWDSFLKIWN 340
Score = 176 (67.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 39/163 (23%), Positives = 74/163 (45%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQ 474
T + GH+G V S S +P +S + D + +LW + + GH + + F P
Sbjct: 178 TTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPN 237
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGH--LSDVDCVRWHINCNYIATGSSDKTVRLW 532
G+ FA+ S D T R++ + Q L + + + + V + + + G D +W
Sbjct: 238 GNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVW 297
Query: 533 DVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWD 575
D + + GH + + L ++ DG +A+G D + +W+
Sbjct: 298 DTLKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 46/201 (22%), Positives = 81/201 (40%)
Query: 351 HNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVS-SGLQGEN---DTTPREDII 405
H G L+C D +V D++ +WD+ + GQQ + +G G+ P +
Sbjct: 142 HTGYLSCCRFLDDNQIVTSS-GDTTCALWDI-ETGQQTTTFAGHTGDVMSLSLAPDTRLF 199
Query: 406 GPNGRKRSYTLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
S L+ GH + + F P G+ + S D T RL+ + +
Sbjct: 200 VSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259
Query: 455 NLVCYKGHNY--PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVR 512
L+ Y N + V F+ G + D +W + ++AGH + V C+
Sbjct: 260 ELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLG 319
Query: 513 WHINCNYIATGSSDKTVRLWD 533
+ +ATGS D +++W+
Sbjct: 320 VTDDGMAVATGSWDSFLKIWN 340
>UNIPROTKB|P74598 [details] [associations]
symbol:sll1491 "Uncharacterized WD repeat-containing
protein sll1491" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S76794 RefSeq:NP_442894.1
RefSeq:YP_005652955.1 ProteinModelPortal:P74598 IntAct:P74598
GeneID:12255406 GeneID:952007 KEGG:syn:sll1491 KEGG:syy:SYNGTS_3002
PATRIC:23843592 OMA:KMPEQTI ProtClustDB:CLSK2301952 Uniprot:P74598
Length = 348
Score = 272 (100.8 bits), Expect = 9.5e-23, P = 9.5e-23
Identities = 89/304 (29%), Positives = 149/304 (49%)
Query: 336 SAALPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGE 395
+ A PSV+ + +I+ DG +A +D+ + + D+A Q+ V S
Sbjct: 46 TTASPSVAVENLSGFQGIITALNITPDGKYLAVATADNQITLIDLAN--QEVVYSQRSPV 103
Query: 396 N---DTTPRED-----IIGPNG---RK-----RSYTLYQGHSGPVYSASFSPLGDFILS- 438
N D D I N R+ R TL GH+ V +FSP G+ I+S
Sbjct: 104 NNFADLAISADGQWLAIAADNNVDVRRVRDGMRVETLV-GHTDKVSGVAFSPDGETIVSV 162
Query: 439 SSADTTIRLWSTKLNANLVCYKGHNY-PVWDVQFNPQGHYFASSS--HDRTARIWSMDRI 495
S D TIR+W + + NL+ N P V F P G F + + DRT + W +
Sbjct: 163 SGGDRTIRIWE-RASGNLIQTLADNLGPTTSVVFTPDGSQFITGAIGQDRTIKFWDANTF 221
Query: 496 QPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAM 555
+ L ++ + + + G+ V+ W+++ + + G I ++A+
Sbjct: 222 ELLGTSPQQPGFINGLAVTPDGRKLV-GAVRNFVKAWNLADAKELFSVRGPSLEINTIAV 280
Query: 556 SPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKL 615
SP+ R++A+ +++GTIM++DLA+G+ VT L GH V +LA+S +G+ L SG+ D TVK+
Sbjct: 281 SPNNRWVATANKEGTIMIFDLANGKQVTTLRGHQGWVLSLAFSPDGNTLYSGAEDKTVKI 340
Query: 616 WDVT 619
WD++
Sbjct: 341 WDLS 344
Score = 182 (69.1 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 70/291 (24%), Positives = 127/291 (43%)
Query: 301 VSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLSSAALPSVSFYTFINTHNGLNCASIS 360
+ TA + PD + T Q L DL N+ + S P +F + +G +I+
Sbjct: 63 IITALNITPDGKYLAVATADNQITLIDLANQEVVYSQRSPVNNFADLAISADG-QWLAIA 121
Query: 361 QDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGH 420
D ++ D ++V + +G SG+ D E I+ +G R+ +++
Sbjct: 122 ADNNVDVRRVRDG-MRVETL--VGHTDKVSGVAFSPDG---ETIVSVSGGDRTIRIWERA 175
Query: 421 SG-----------PVYSASFSPLGD-FILSS-SADTTIRLWSTKLNANLVCYKGHNYPVW 467
SG P S F+P G FI + D TI+ W L +
Sbjct: 176 SGNLIQTLADNLGPTTSVVFTPDGSQFITGAIGQDRTIKFWDANTFELLGTSPQQPGFIN 235
Query: 468 DVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDK 527
+ P G + + + W++ + L + G +++ + N ++AT + +
Sbjct: 236 GLAVTPDGRKLVGAVRN-FVKAWNLADAKELFSVRGPSLEINTIAVSPNNRWVATANKEG 294
Query: 528 TVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
T+ ++D+++G+ V GH+ +LSLA SPDG + SG ED T+ +WDL++
Sbjct: 295 TIMIFDLANGKQVTTLRGHQGWVLSLAFSPDGNTLYSGAEDKTVKIWDLSA 345
Score = 162 (62.1 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 54/218 (24%), Positives = 98/218 (44%)
Query: 437 LSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFAS-SSHDRTARIWSMDRI 495
L+ +AD + + + + GH V V F+P G S S DRT RIW
Sbjct: 118 LAIAADNNVDVRRVRDGMRVETLVGHTDKVSGVAFSPDGETIVSVSGGDRTIRIWERASG 177
Query: 496 QPLRIMAGHLSDVDCVRWHINCNYIATGS--SDKTVRLWDVSSGECVRIFIGHRSMILSL 553
++ +A +L V + + + TG+ D+T++ WD ++ E + I L
Sbjct: 178 NLIQTLADNLGPTTSVVFTPDGSQFITGAIGQDRTIKFWDANTFELLGTSPQQPGFINGL 237
Query: 554 AMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTV 613
A++PDGR + G + W+LA + + + G + + T+A S +A+ + + T+
Sbjct: 238 AVTPDGRKLV-GAVRNFVKAWNLADAKELFSVRGPSLEINTIAVSPNNRWVATANKEGTI 296
Query: 614 KLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYS 651
++D+ +V G + SL P +T +YS
Sbjct: 297 MIFDLANGKQVTTLRGHQGW--VLSLAFSPDGNT-LYS 331
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 290 (107.1 bits), Expect = 9.9e-23, P = 9.9e-23
Identities = 71/229 (31%), Positives = 107/229 (46%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA-NLVCYKGHNYPVWDVQFNPQGH 476
+GHS V S +FSP G ++ S S DTT+R W + C +GH + V + ++P G
Sbjct: 112 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTC-QGHRHWVLSISWSPDGK 170
Query: 477 YFASSSHDRTARIWSMDRIQPL-RIMAGHLSDVDCVRW---HIN--CNYIATGSSDKTVR 530
AS + +W + + R + GH + + W H N C Y+A+ S D +VR
Sbjct: 171 KLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVR 230
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
+WD ++G C R GH + L DG + S +D TI +W G L GH
Sbjct: 231 VWDTTAGRCERTLTGHAQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGH 289
Query: 591 CVWTLAYSCEGSLLASG--SADCTVKLWDVTTSTKVLKTEEKSGTNRLR 637
V T+A S + +L A+ +V D+ S + LK S N +R
Sbjct: 290 WVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVR 338
Score = 262 (97.3 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 65/189 (34%), Positives = 95/189 (50%)
Query: 434 DFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMD 493
D I A +R T+ ++L +GH+ V V F+P G Y AS S D T R W +
Sbjct: 90 DIIYQPQAIFRVRA-VTRCTSSL---EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLS 145
Query: 494 RIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECV-RIFIGHRSMILS 552
P GH V + W + +A+G + + LWD S+G+ V R GH I +
Sbjct: 146 TETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITA 205
Query: 553 LAM-----SPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASG 607
L+ +P+ RY+AS +DG++ +WD +GRC L GH V L + +G LL S
Sbjct: 206 LSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDG-LLYSA 264
Query: 608 SADCTVKLW 616
S D T+K+W
Sbjct: 265 SQDRTIKVW 273
Score = 223 (83.6 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 68/267 (25%), Positives = 128/267 (47%)
Query: 366 VAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPR---EDIIGPNGRKRSYTLYQGHSG 422
VA D S++VWD + +G ++ T R + ++ + R+ +++ H G
Sbjct: 220 VASSSKDGSVRVWDTTAGRCERTLTG-HAQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG 278
Query: 423 PVYSASFSPLGDFI--LSSSADTTIRLWS---TKLNANLVCYKGHNYPVWD---VQFN-- 472
V + G ++ ++ S D +R + + + N +G + + ++N
Sbjct: 279 -VLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLV 337
Query: 473 -PQG-HYFASSSHDRTARIWS-MDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
QG S S D T +WS + +PL M GH + ++ V + + IA+ S DK++
Sbjct: 338 RGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSI 397
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
+LWD +G+ + GH + + +A S D R + SG D T+ +WD+ + + T L GH
Sbjct: 398 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHA 457
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLW 616
V+ + +S +G +ASG D +++W
Sbjct: 458 DEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 214 (80.4 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 62/207 (29%), Positives = 106/207 (51%)
Query: 419 GHSGPVYSASFSPLGDFIL-SSSADTTIRLWSTKLNANLVC--YKGHNYPVWDVQFNPQG 475
GH+ V + GD +L S+S D TI++W + + ++C +GH + V + +
Sbjct: 245 GHAQSVTCLRWG--GDGLLYSASQDRTIKVW--RAHDGVLCRTLQGHGHWVNTMALSTDY 300
Query: 476 HYFASSSHDRTARIWSMD---RIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLW 532
+ A + + D +Q L+ A LS + VR + +GS D T+ LW
Sbjct: 301 ALRTGAFEPAEASVNAQDLRGSLQELKERA--LSRYNLVRGQ-GPERLVSGSDDFTLFLW 357
Query: 533 DVSSGEC-VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSC 591
+ + + GH+++I + SPD R +AS D +I +WD +G+ + L GH +
Sbjct: 358 SPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAA 417
Query: 592 VWTLAYSCEGSLLASGSADCTVKLWDV 618
V+ +A+S + LL SGS+D T+K+WDV
Sbjct: 418 VYQIAWSADSRLLVSGSSDSTLKVWDV 444
Score = 201 (75.8 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 46/125 (36%), Positives = 73/125 (58%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
+ GH V V + Y+A+GS D TVR WD+S+ GHR +LS++ SPDG+
Sbjct: 111 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 170
Query: 561 YMASGDEDGTIMMWDLASGRCV-TPLMGHTSCVWTLAY-----SCEGSLLASGSADCTVK 614
+ASG ++G I++WD ++G+ V L GH+ + L++ + E +AS S D +V+
Sbjct: 171 KLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVR 230
Query: 615 LWDVT 619
+WD T
Sbjct: 231 VWDTT 235
Score = 190 (71.9 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 65/241 (26%), Positives = 99/241 (41%)
Query: 394 GENDTTPRE-DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
G DTT R D+ + + QGH V S S+SP G + S + I LW
Sbjct: 133 GSGDTTVRFWDL----STETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPST 188
Query: 453 NANLV-CYKGHNYPV----WD-VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLS 506
+ GH+ + W+ + NP+ Y ASSS D + R+W + R + GH
Sbjct: 189 GKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQ 248
Query: 507 DVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGD 566
V C+RW + + + S D+T+++W G R GH + ++A+S D
Sbjct: 249 SVTCLRWGGD-GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAF 307
Query: 567 E--DGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
E + ++ DL + L + L L SGS D T+ LW K
Sbjct: 308 EPAEASVNAQDLRGS--LQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKP 365
Query: 625 L 625
L
Sbjct: 366 L 366
Score = 157 (60.3 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS 598
C GH ++S+A SP G+Y+ASG D T+ WDL++ GH V ++++S
Sbjct: 107 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWS 166
Query: 599 CEGSLLASGSADCTVKLWDVTTSTKV 624
+G LASG + + LWD +T +V
Sbjct: 167 PDGKKLASGCKNGQILLWDPSTGKQV 192
Score = 153 (58.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 55/225 (24%), Positives = 104/225 (46%)
Query: 407 PNGRKRSYTLYQGHSGPVYSASFSPLGD-----FILSSSADTTIRLWSTKLNANLVCYKG 461
P+ K+ GHS + + S+ PL ++ SSS D ++R+W T G
Sbjct: 186 PSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTG 245
Query: 462 HNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY-I 520
H V +++ G + S+S DRT ++W R + GH V+ + ++ +Y +
Sbjct: 246 HAQSVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMA--LSTDYAL 302
Query: 521 ATGS---SDKTVRLWDVSSGECVRIFIGHRSMI-LSLAMSPDGRYMASGDEDGTIMMWDL 576
TG+ ++ +V D+ G + R++ +L + SG +D T+ +W
Sbjct: 303 RTGAFEPAEASVNAQDLR-GSLQEL--KERALSRYNLVRGQGPERLVSGSDDFTLFLWSP 359
Query: 577 ASGRC-VTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
A + + + GH + + + +S + ++AS S D ++KLWD T
Sbjct: 360 AEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRT 404
Score = 47 (21.6 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMA 381
+ S G +A G D++++ WD++
Sbjct: 122 AFSPTGKYLASGSGDTTVRFWDLS 145
Score = 47 (21.6 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGEN 396
S S DG +A G + + +WD + G+Q V L G +
Sbjct: 164 SWSPDGKKLASGCKNGQILLWDPST-GKQ-VGRALTGHS 200
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 271 (100.5 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 68/214 (31%), Positives = 109/214 (50%)
Query: 418 QGHSGPVYSASFSPLG-DFILSSSADTTIRLWSTKLNANLVCY-----KGHNYPVWDVQF 471
+GH+G V S + S + +LS S D T+ +W+ + Y +GH++ V D
Sbjct: 12 EGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCVI 71
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+ G Y S+S D++ R+W + Q R GH +DV V + + I +GS D+T++L
Sbjct: 72 SSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKL 131
Query: 532 WDVSSGECVRIFI--GHRSMILSLAMSPDGR--YMASGDEDGTIMMWDLASGRCVTPLMG 587
W+ + G+C GH + + SP+ + + S D + +W+LAS R T +G
Sbjct: 132 WN-TLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDHIG 190
Query: 588 HTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTS 621
HT + T+ S +GSL ASG D LWD+ S
Sbjct: 191 HTGYINTVTISPDGSLCASGGKDGVTMLWDLNES 224
Score = 239 (89.2 bits), Expect = 2.4e-21, Sum P(2) = 2.4e-21
Identities = 67/225 (29%), Positives = 105/225 (46%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GHS V S G + LS+S D ++RLW + GH V V F+
Sbjct: 60 EGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQ 119
Query: 478 FASSSHDRTARIWS-MDRIQPLRIMAGHLSDVDCVRWHINCN--YIATGSSDKTVRLWDV 534
S S DRT ++W+ + + GH V CVR+ N I + DK V++W++
Sbjct: 120 IVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWEL 179
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+S IGH I ++ +SPDG ASG +DG M+WDL + + L +
Sbjct: 180 ASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAGDE-IHA 238
Query: 595 LAYSCEGSLLASGSADCTVKLWDVTTSTKV--LKTE--EKSGTNR 635
L +S L + ++ ++ ++D+ +KV LK E EK +R
Sbjct: 239 LVFSPNRYWLCAATSS-SITIFDLEKKSKVDELKPEYIEKGKKSR 282
Score = 216 (81.1 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 61/198 (30%), Positives = 100/198 (50%)
Query: 460 KGHNYPVWDVQFNPQG-HYFASSSHDRTARIWSMDRIQ-----PLRIMAGHLSDV-DCVR 512
+GHN V + + + + S S D+T IW++ R + P R + GH V DCV
Sbjct: 12 EGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCVI 71
Query: 513 WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIM 572
Y + S DK++RLW++SSG+ R F+GH + +LS++ S D R + SG D TI
Sbjct: 72 SSDGA-YALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIK 130
Query: 573 MWDLASGRCVTPLM--GHTSCVWTLAYSC--EGSLLASGSADCTVKLWDVTTSTKVLKTE 628
+W+ G C + GHT V + +S + ++ S D VK+W++ + L+T+
Sbjct: 131 LWNTL-GDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCR--LQTD 187
Query: 629 EKSGTNRLRSLKTLPTKS 646
T + ++ P S
Sbjct: 188 HIGHTGYINTVTISPDGS 205
Score = 185 (70.2 bits), Expect = 8.0e-13, Sum P(2) = 8.0e-13
Identities = 66/218 (30%), Positives = 100/218 (45%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANL-VCYKGHNYPVWDVQF--NP 473
+ GH+ V S SFS I+S S D TI+LW+T + + KGH V V+F NP
Sbjct: 101 FVGHTNDVLSVSFSADNRQIVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNP 160
Query: 474 QGHYFASSSHDRTARIWSMD--RIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
Q S+ D+ ++W + R+Q I GH ++ V + + A+G D L
Sbjct: 161 QNPVIVSAGWDKLVKVWELASCRLQTDHI--GHTGYINTVTISPDGSLCASGGKDGVTML 218
Query: 532 WDVSSGECVRIFIGHRS-MILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLM---- 586
WD++ E ++ H I +L SP+ RY +I ++DL V L
Sbjct: 219 WDLN--ESKHLYSLHAGDEIHALVFSPN-RYWLCAATSSSITIFDLEKKSKVDELKPEYI 275
Query: 587 --GHTS----CVWTLAYSCEGSLLASGSADCTVKLWDV 618
G S CV +LA+S +G L +G D ++ W V
Sbjct: 276 EKGKKSREPECV-SLAWSADGQTLFAGYTDNKIRAWGV 312
Score = 52 (23.4 bits), Expect = 8.0e-13, Sum P(2) = 8.0e-13
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 349 NTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQ 385
++H +C IS DG+ D SL++W+++ GQ
Sbjct: 62 HSHIVSDCV-ISSDGAYALSASWDKSLRLWELSS-GQ 96
Score = 44 (20.5 bits), Expect = 2.4e-21, Sum P(2) = 2.4e-21
Identities = 10/39 (25%), Positives = 23/39 (58%)
Query: 351 HNG--LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQA 387
HNG + A+ ++ +++ G D +L +W++ + +QA
Sbjct: 14 HNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTR-DEQA 51
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 271 (100.5 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 65/199 (32%), Positives = 102/199 (51%)
Query: 428 SFSPLGDFILSSSADTTIRLWSTKLNANL---VCYKGHNYPVWDVQFNPQGHYFASSSHD 484
+++P G + S D IR+W T+ ++ + V +GH V V ++P G+Y AS+S D
Sbjct: 23 AWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD 82
Query: 485 RTARIW--SMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG---EC 539
T IW + D + + + GH ++V V W + N +AT S DK+V +W+V EC
Sbjct: 83 ATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYEC 142
Query: 540 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW--DLASGRCVTPLMGHTSCVWTLAY 597
V + H + + P +AS D T+ ++ + C L GH S VW+LA+
Sbjct: 143 VSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAF 202
Query: 598 SCEGSLLASGSADCTVKLW 616
G LAS S D TV++W
Sbjct: 203 DPSGQRLASCSDDRTVRIW 221
Score = 224 (83.9 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 51/167 (30%), Positives = 84/167 (50%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY---KGHNYPVWDVQFN 472
L +GH V ++SP G+++ S+S D T +W K + C +GH V V +
Sbjct: 56 LSEGHQRTVRKVAWSPCGNYLASASFDATTCIWK-KNQDDFECVTTLEGHENEVKSVAWA 114
Query: 473 PQGHYFASSSHDRTARIWSMDR---IQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
P G+ A+ S D++ +W +D + + ++ H DV V WH + +A+ S D TV
Sbjct: 115 PSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTV 174
Query: 530 RLWDVSSGE--CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
+L+ + C GH S + SLA P G+ +AS +D T+ +W
Sbjct: 175 KLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW 221
Score = 198 (74.8 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 52/158 (32%), Positives = 75/158 (47%)
Query: 467 WDVQFNPQGHYFASSSHDRTARIWSMDR---IQPLRIMAGHLSDVDCVRWHINCNYIATG 523
W + +NP G AS DR RIW + I + GH V V W NY+A+
Sbjct: 20 WFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASA 79
Query: 524 SSDKTVRLWDVSSG--ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG-- 579
S D T +W + ECV GH + + S+A +P G +A+ D ++ +W++
Sbjct: 80 SFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE 139
Query: 580 -RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
CV+ L HT V + + LLAS S D TVKL+
Sbjct: 140 YECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLY 177
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 35/111 (31%), Positives = 57/111 (51%)
Query: 513 WHINCNYIATGSSDKTVRLWDVSSGE--CVRIFI-GHRSMILSLAMSPDGRYMASGDEDG 569
W+ +A+ D+ +R+W C + GH+ + +A SP G Y+AS D
Sbjct: 24 WNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA 83
Query: 570 TIMMWDLASG--RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
T +W CVT L GH + V ++A++ G+LLA+ S D +V +W+V
Sbjct: 84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEV 134
Score = 121 (47.7 bits), Expect = 0.00028, P = 0.00028
Identities = 31/123 (25%), Positives = 58/123 (47%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK---GHNYPVWDVQF 471
T +GH V S +++P G+ + + S D ++ +W C H V V +
Sbjct: 99 TTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW 158
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPL--RIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
+P AS+S+D T +++ + + + GH S V + + + +A+ S D+TV
Sbjct: 159 HPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTV 218
Query: 530 RLW 532
R+W
Sbjct: 219 RIW 221
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 280 (103.6 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 57/200 (28%), Positives = 102/200 (51%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GHS V ++ P G F+ ++ D + RLW ++ ++ +GH+ V D+ F+P G
Sbjct: 305 EGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSL 364
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
+ D AR+W + + + + GH+ ++ + + N ++ATGS D ++WD+
Sbjct: 365 AGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQR 424
Query: 538 ECVRIFIGHRSMILSLAMSP-DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
C+ H++++ S+ P DG Y+ +G D T +W + L GH V +
Sbjct: 425 RCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVD 484
Query: 597 YSCEGSLLASGSADCTVKLW 616
S +G L+A+ S D T KLW
Sbjct: 485 LSPDGQLIATCSYDRTFKLW 504
Score = 276 (102.2 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 59/208 (28%), Positives = 104/208 (50%)
Query: 418 QGHSGPVYSASFSPLGDFILSSS--------ADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
+GH+ V + SF P L S AD +++LWS + + +GH+ V V
Sbjct: 255 RGHNTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARV 314
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
++P G + ++ +D + R+W ++ + + GH V + +H + + TG D
Sbjct: 315 TWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFA 374
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
R+WD+ +G CV GH I S+ SP+G ++A+G D +WDL RC+ + H
Sbjct: 375 RVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQ 434
Query: 590 SCVWTLAYSC-EGSLLASGSADCTVKLW 616
+ V ++ + +G L +G+ D T K+W
Sbjct: 435 NLVSSVKFQPNDGHYLLTGAYDNTAKIW 462
Score = 270 (100.1 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 67/234 (28%), Positives = 111/234 (47%)
Query: 395 ENDTTPREDIIGPNGRK-RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLN 453
E+ T ++ + N R ++ G P+ FSP ++++S +LW +
Sbjct: 189 ESTRTIKQQELHKNLRNVNNFCSQIGDDRPISYCQFSPNSKLLVTASWSGLCKLWKVP-D 247
Query: 454 ANLV-CYKGHNYPVWDVQFNPQGHY--------FASSSHDRTARIWSMDRIQPLRIMAGH 504
L+ +GHN V + F+PQ AS + D + ++WS+D +P+ + GH
Sbjct: 248 CTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSDEPIADIEGH 307
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
V V WH + ++ T D + RLWD+ E + GH + L PDG +
Sbjct: 308 SMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGT 367
Query: 565 GDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
G D +WDL +GRCV L GH ++++ +S G +A+GS D K+WD+
Sbjct: 368 GGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDL 421
Score = 185 (70.2 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 45/185 (24%), Positives = 84/185 (45%)
Query: 453 NANLVCYK-GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCV 511
N N C + G + P+ QF+P ++S ++W + +R + GH ++V +
Sbjct: 205 NVNNFCSQIGDDRPISYCQFSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAI 264
Query: 512 RWHINCNY--------IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMA 563
+H +A+ ++D +V+LW + S E + GH + + P GR++
Sbjct: 265 SFHPQATLTLEESDVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLG 324
Query: 564 SGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTK 623
+ D + +WDL + GH+ V L + +GSL +G D ++WD+ T
Sbjct: 325 TTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRC 384
Query: 624 VLKTE 628
V+ E
Sbjct: 385 VMFLE 389
Score = 183 (69.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 40/122 (32%), Positives = 60/122 (49%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
R +GH +YS +FSP G + + S D ++W + + H V V+F
Sbjct: 383 RCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKF 442
Query: 472 NPQ-GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVR 530
P GHY + ++D TA+IW+ PL+ +AGH V V + IAT S D+T +
Sbjct: 443 QPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFK 502
Query: 531 LW 532
LW
Sbjct: 503 LW 504
Score = 118 (46.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 41/155 (26%), Positives = 67/155 (43%)
Query: 353 GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQ------------QAVSSGLQGENDTTP 400
G++ DGSL G DS +VWD+ + G+ +++ G + T
Sbjct: 352 GVHDLHFHPDGSLAGTGGLDSFARVWDL-RTGRCVMFLEGHIKEIYSINFSPNGFHVATG 410
Query: 401 RED----IIGPNGRKRSYTLYQGHSGPVYSASFSPL-GDFILSSSADTTIRLWSTKLNAN 455
D + R+ YT+ H V S F P G ++L+ + D T ++W+ +
Sbjct: 411 SGDNACKVWDLRQRRCIYTI-PAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSP 469
Query: 456 LVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIW 490
L GH V V +P G A+ S+DRT ++W
Sbjct: 470 LKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKLW 504
Score = 112 (44.5 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 30/124 (24%), Positives = 52/124 (41%)
Query: 516 NCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRY--------MASGDE 567
N + T S +LW V +R GH + + +++ P MAS
Sbjct: 227 NSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMASCAA 286
Query: 568 DGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
DG++ +W L S + + GH+ V + + G L + D + +LWD+ ++L
Sbjct: 287 DGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQ 346
Query: 628 EEKS 631
E S
Sbjct: 347 EGHS 350
Score = 53 (23.7 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 21/91 (23%), Positives = 40/91 (43%)
Query: 214 SNQDAANQINQKEVHWGLLEDSLENRLEKTGLIS---DSEKAEGENKEAEIDENKKRPVE 270
S++D A + + + +G LE+ + RL + G + D+ KA E I + +E
Sbjct: 2 SDEDEAPVVKRSRIFYGSLEEKEKERLSREGTSTTAKDAVKAGIEAGHINISSGESMEME 61
Query: 271 ---GGKQGASIKKLKKDK-AINATAKTSRLE 297
+Q + + ++ K A T T +E
Sbjct: 62 ERVSERQAEVLAEFERRKRARQITVSTDDVE 92
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 270 (100.1 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 73/239 (30%), Positives = 115/239 (48%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GHS V S G F LS S D +RLW + + GH V V F+
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQI 120
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAG---HLSDVDCVRWHINCNY--IATGSSDKTVRLWD 533
S+S DRT ++W+ I G H V CVR+ N I + S DKTV++W+
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWN 180
Query: 534 VSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVW 593
+S+ + GH + ++A+SPDG ASG +DG +++WDLA G+ + L + S +
Sbjct: 181 LSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVIH 239
Query: 594 TLAYSCEGSLLASGSADCTVKLWDVTTSTKV--LKTEEKSGTNRLRSLKTLPTKSTPVY 650
L +S L + + + +K+WD+ + + V LK + K+ + + TK +Y
Sbjct: 240 ALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIY 297
Score = 256 (95.2 bits), Expect = 5.1e-21, P = 5.1e-21
Identities = 74/227 (32%), Positives = 114/227 (50%)
Query: 418 QGHSGPVYSASFSPL--GDFILSSSADTTIRLWS-TKLN-ANLVCYK---GHNYPVWDVQ 470
+ H+ V +A +P+ D I+S+S D +I LW TK + A V + GH++ V DV
Sbjct: 12 RAHTDMV-TAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVV 70
Query: 471 FNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVR 530
+ G + S S D R+W + R GH DV V + ++ I + S D+T++
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIK 130
Query: 531 LWDVSSGECVRIFI----GHRSMILSLAMSPDGRY--MASGDEDGTIMMWDLASGRCVTP 584
LW+ + GEC GHR + + SP+ + S D T+ +W+L++ + +
Sbjct: 131 LWN-TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRST 189
Query: 585 LMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKS 631
L GHT V T+A S +GSL ASG D V LWD+ K+ E S
Sbjct: 190 LAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANS 236
Score = 187 (70.9 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 44/138 (31%), Positives = 67/138 (48%)
Query: 501 MAGHLSDVDCVRWHI-NCNYIATGSSDKTVRLW-----DVSSGECVRIFIGHRSMILSLA 554
M H V + I N + I + S DK++ LW D + G R GH + +
Sbjct: 11 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVV 70
Query: 555 MSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVK 614
+S DG++ SG DG + +WDLA+G +GHT V ++A+S + + S S D T+K
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIK 130
Query: 615 LWDVTTSTKVLKTEEKSG 632
LW+ K +E G
Sbjct: 131 LWNTLGECKYTISEGGEG 148
Score = 184 (69.8 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 53/175 (30%), Positives = 88/175 (50%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKG---HNYPVWDVQFNP 473
+ GH+ V S +FS I+S+S D TI+LW+T +G H V V+F+P
Sbjct: 101 FVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSP 160
Query: 474 QGHY--FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
S+S D+T ++W++ + +AGH V V + + A+G D V L
Sbjct: 161 NTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLL 220
Query: 532 WDVSSGECVRIF-IGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPL 585
WD++ G+ +++ + S+I +L SP+ ++ + E G I +WDL S V L
Sbjct: 221 WDLAEGK--KLYSLEANSVIHALCFSPNRYWLCAATEHG-IKIWDLESKSIVEDL 272
Score = 54 (24.1 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 359 ISQDGSLVAGGFSDSSLKVWDMA 381
+S DG G D L++WD+A
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLA 93
Score = 52 (23.4 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 594 TLAYSCEGSLLASGSADCTVKLWDV 618
+L +S +GS L SG D +++W +
Sbjct: 300 SLNWSADGSTLFSGYTDGVIRVWGI 324
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 270 (100.1 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 70/238 (29%), Positives = 116/238 (48%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GHS V S G F LS S D +RLW + + GH V V F+
Sbjct: 61 GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQI 120
Query: 479 ASSSHDRTARIWSM--DRIQPLRIMAGHLSDVDCVRWHINCNY--IATGSSDKTVRLWDV 534
S+S DRT ++W+ + + GH V CVR+ N I + S DKTV++W++
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL 180
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ + GH + ++A+SPDG ASG +DG I++WDLA G+ + L S + +
Sbjct: 181 QNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG-SIIHS 239
Query: 595 LAYSCEGSLLASGSADCTVKLWDVTTSTKV--LKTEEKSGTNRLRSLKTLPTKSTPVY 650
L +S L + + + ++++WD+ + + V LK + K+ + + K+ +Y
Sbjct: 240 LCFSPNRYWLCAATEN-SIRIWDLESKSVVEDLKVDLKAEAEKTDGSTGIGNKTKVIY 296
Score = 243 (90.6 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 65/208 (31%), Positives = 104/208 (50%)
Query: 434 DFILSSSADTTIRLWS-TKLNANL-VCYK---GHNYPVWDVQFNPQGHYFASSSHDRTAR 488
D I++SS D +I LW TK + + V + GH++ V DV + G + S S D R
Sbjct: 29 DVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELR 88
Query: 489 IWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGEC---VRIFIG 545
+W + + R GH DV V + + I + S D+T++LW+ + GEC + G
Sbjct: 89 LWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN-TLGECKYTISEADG 147
Query: 546 HRSMILSLAMSPDGRY--MASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSL 603
H+ + + SP+ + S D T+ +W+L + + L GH+ + T+A S +GSL
Sbjct: 148 HKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSL 207
Query: 604 LASGSADCTVKLWDVTTSTKVLKTEEKS 631
ASG D + LWD+ K+ E S
Sbjct: 208 CASGGKDGVILLWDLAEGKKLYSLEAGS 235
Score = 196 (74.1 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 46/154 (29%), Positives = 71/154 (46%)
Query: 501 MAGHLSDVDCVRWHI-NCNYIATGSSDKTVRLW-----DVSSGECVRIFIGHRSMILSLA 554
M H V + + N + I T S DK++ LW D S G R GH + +
Sbjct: 11 MCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVV 70
Query: 555 MSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVK 614
+S DG++ SG DG + +WDLA+G +GHT V ++A+S + + S S D T+K
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIK 130
Query: 615 LWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTP 648
LW+ K +E + ++ P P
Sbjct: 131 LWNTLGECKYTISEADGHKEWVSCVRFSPNTLVP 164
Score = 186 (70.5 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 50/174 (28%), Positives = 87/174 (50%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD--VQFNPQ 474
+ GH+ V S +FS I+S+S D TI+LW+T + + W V+F+P
Sbjct: 101 FVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPN 160
Query: 475 GHY--FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLW 532
S+S D+T ++W++ + +AGH ++ V + + A+G D + LW
Sbjct: 161 TLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLW 220
Query: 533 DVSSGECVRIF-IGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPL 585
D++ G+ +++ + S+I SL SP+ RY + +I +WDL S V L
Sbjct: 221 DLAEGK--KLYSLEAGSIIHSLCFSPN-RYWLCAATENSIRIWDLESKSVVEDL 271
Score = 54 (24.1 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 359 ISQDGSLVAGGFSDSSLKVWDMA 381
+S DG G D L++WD+A
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLA 93
Score = 49 (22.3 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 594 TLAYSCEGSLLASGSADCTVKLWDV 618
+L +S +G+ L SG D +++W +
Sbjct: 299 SLNWSADGNTLFSGYTDGVIRVWGI 323
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 270 (100.1 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 64/199 (32%), Positives = 101/199 (50%)
Query: 428 SFSPLGDFILSSSADTTIRLWSTKLNANL---VCYKGHNYPVWDVQFNPQGHYFASSSHD 484
+++P G + S D IR+W T+ ++ + V +GH V V ++P G+Y AS+S D
Sbjct: 23 AWNPSGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD 82
Query: 485 RTARIW--SMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG---EC 539
T IW + D + + + GH ++V V W + N +AT S DK+V +W+V EC
Sbjct: 83 ATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYEC 142
Query: 540 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR--CVTPLMGHTSCVWTLAY 597
V + H + + P +AS D T+ ++ C L GH S VW++A+
Sbjct: 143 VSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAF 202
Query: 598 SCEGSLLASGSADCTVKLW 616
G LAS S D TV++W
Sbjct: 203 DPSGQRLASCSDDRTVRIW 221
Score = 227 (85.0 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 50/167 (29%), Positives = 85/167 (50%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY---KGHNYPVWDVQFN 472
L +GH V ++SP G+++ S+S D T +W K + C +GH V V +
Sbjct: 56 LSEGHQRTVRKVAWSPCGNYLASASFDATTCIWK-KNQDDFECVTTLEGHENEVKSVAWA 114
Query: 473 PQGHYFASSSHDRTARIWSMDR---IQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
P G+ A+ S D++ +W +D + + +++ H DV V WH + +A+ S D TV
Sbjct: 115 PSGNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQELLASASYDDTV 174
Query: 530 RLWDVSSGE--CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
+L+ + C GH S + S+A P G+ +AS +D T+ +W
Sbjct: 175 KLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIW 221
Score = 200 (75.5 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 52/158 (32%), Positives = 75/158 (47%)
Query: 467 WDVQFNPQGHYFASSSHDRTARIWSMDR---IQPLRIMAGHLSDVDCVRWHINCNYIATG 523
W + +NP G AS DR RIW + I + GH V V W NY+A+
Sbjct: 20 WFLAWNPSGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASA 79
Query: 524 SSDKTVRLWDVSSG--ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG-- 579
S D T +W + ECV GH + + S+A +P G +A+ D ++ +W++
Sbjct: 80 SFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE 139
Query: 580 -RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
CV+ L HT V + + LLAS S D TVKL+
Sbjct: 140 YECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLY 177
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 35/111 (31%), Positives = 58/111 (52%)
Query: 513 WHINCNYIATGSSDKTVRLWDVSSGE--CVRIFI-GHRSMILSLAMSPDGRYMASGDEDG 569
W+ + +A+ D+ +R+W C + GH+ + +A SP G Y+AS D
Sbjct: 24 WNPSGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA 83
Query: 570 TIMMWDLASG--RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
T +W CVT L GH + V ++A++ G+LLA+ S D +V +W+V
Sbjct: 84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEV 134
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 32/123 (26%), Positives = 57/123 (46%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK---GHNYPVWDVQF 471
T +GH V S +++P G+ + + S D ++ +W C H V V +
Sbjct: 99 TTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVW 158
Query: 472 NPQGHYFASSSHDRTARIWSM--DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
+P AS+S+D T +++ D + GH S V + + + +A+ S D+TV
Sbjct: 159 HPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTV 218
Query: 530 RLW 532
R+W
Sbjct: 219 RIW 221
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 270 (100.1 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 64/199 (32%), Positives = 101/199 (50%)
Query: 428 SFSPLGDFILSSSADTTIRLWSTKLNANL---VCYKGHNYPVWDVQFNPQGHYFASSSHD 484
+++P G + S D IR+W T+ ++ + V +GH V V ++P G+Y AS+S D
Sbjct: 23 AWNPTGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD 82
Query: 485 RTARIW--SMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG---EC 539
T IW + D + + + GH ++V V W + N +AT S DK+V +W+V EC
Sbjct: 83 ATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYEC 142
Query: 540 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR--CVTPLMGHTSCVWTLAY 597
V + H + + P +AS D T+ ++ C L GH S VW++A+
Sbjct: 143 VSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAF 202
Query: 598 SCEGSLLASGSADCTVKLW 616
G LAS S D TV++W
Sbjct: 203 DPSGQRLASCSDDRTVRIW 221
Score = 224 (83.9 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 50/167 (29%), Positives = 84/167 (50%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY---KGHNYPVWDVQFN 472
L +GH V ++SP G+++ S+S D T +W K + C +GH V V +
Sbjct: 56 LSEGHQRTVRKVAWSPCGNYLASASFDATTCIWK-KNQDDFECVTTLEGHENEVKSVAWA 114
Query: 473 PQGHYFASSSHDRTARIWSMDR---IQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
P G+ A+ S D++ +W +D + + ++ H DV V WH + +A+ S D TV
Sbjct: 115 PSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTV 174
Query: 530 RLWDVSSGE--CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
+L+ + C GH S + S+A P G+ +AS +D T+ +W
Sbjct: 175 KLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIW 221
Score = 198 (74.8 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 52/158 (32%), Positives = 75/158 (47%)
Query: 467 WDVQFNPQGHYFASSSHDRTARIWSMDR---IQPLRIMAGHLSDVDCVRWHINCNYIATG 523
W + +NP G AS DR RIW + I + GH V V W NY+A+
Sbjct: 20 WFLAWNPTGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASA 79
Query: 524 SSDKTVRLWDVSSG--ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG-- 579
S D T +W + ECV GH + + S+A +P G +A+ D ++ +W++
Sbjct: 80 SFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE 139
Query: 580 -RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
CV+ L HT V + + LLAS S D TVKL+
Sbjct: 140 YECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLY 177
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 35/111 (31%), Positives = 57/111 (51%)
Query: 513 WHINCNYIATGSSDKTVRLWDVSSGE--CVRIFI-GHRSMILSLAMSPDGRYMASGDEDG 569
W+ +A+ D+ +R+W C + GH+ + +A SP G Y+AS D
Sbjct: 24 WNPTGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA 83
Query: 570 TIMMWDLASG--RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
T +W CVT L GH + V ++A++ G+LLA+ S D +V +W+V
Sbjct: 84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEV 134
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 32/123 (26%), Positives = 57/123 (46%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK---GHNYPVWDVQF 471
T +GH V S +++P G+ + + S D ++ +W C H V V +
Sbjct: 99 TTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW 158
Query: 472 NPQGHYFASSSHDRTARIWSM--DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
+P AS+S+D T +++ D + GH S V + + + +A+ S D+TV
Sbjct: 159 HPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTV 218
Query: 530 RLW 532
R+W
Sbjct: 219 RIW 221
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 292 (107.8 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 59/213 (27%), Positives = 108/213 (50%)
Query: 420 HSGPVYSASFSP-LGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
HS V S G + + D + +WS ++ GH P+ +Q + +
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELI 78
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
+ S + R+W ++ + LR + GH +++ + +H +++A+GS D ++LWDV
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKG 138
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS 598
C+ + H + L SPDG+++AS +D T+ +WDL +G+ + GH+ V + +
Sbjct: 139 CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFH 198
Query: 599 CEGSLLASGSADCTVKLWDVTTSTKVLKTEEKS 631
LLASGS+D T++ WD+ V EE++
Sbjct: 199 PSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEA 231
Score = 258 (95.9 bits), Expect = 9.5e-19, P = 9.5e-19
Identities = 80/301 (26%), Positives = 129/301 (42%)
Query: 363 GSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTP--------REDIIGPNGRKRSY 414
G L+A G D + VW + K V S L G TTP +E++I + S
Sbjct: 33 GRLLATGGDDCRVNVWSVNK--PNCVMS-LTGH--TTPIESLQISAKEELIVAGSQSGSI 87
Query: 415 TLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHN 463
++ GH + S F P G F+ S S DT I+LW + + YK H
Sbjct: 88 RVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHT 147
Query: 464 YPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATG 523
V ++F+P G + AS++ D T ++W + + + GH V+ V +H + +A+G
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASG 207
Query: 524 SSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVT 583
SSD+T+R WD+ V + + + +PDG + G +D ++ ++ RC
Sbjct: 208 SSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD-SLRVYGWEPERCFD 266
Query: 584 PLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLP 643
++ + V L+ C L+ A TV + V S G R L P
Sbjct: 267 VVVVNWGKVADLSV-CHNQLIGVSFAQSTVSSFVVDLSRVTKSGSVPHGLLRNNELLAQP 325
Query: 644 T 644
T
Sbjct: 326 T 326
Score = 164 (62.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 56/217 (25%), Positives = 96/217 (44%)
Query: 359 ISQDGSLVAGGFSDSSLKVWDM--AK-----LGQQAVSSGLQ----------GENDTTPR 401
IS L+ G S++VWD+ AK LG +A L G DT
Sbjct: 71 ISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDT--- 127
Query: 402 EDI-IGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
DI + RK Y+ H+ V FSP G ++ S++ D T++LW + +
Sbjct: 128 -DIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFT 186
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN--CN 518
GH+ PV V+F+P + AS S DRT R W +++ + + + V C+ ++ + C
Sbjct: 187 GHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCL 246
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAM 555
Y G ++R++ C + + + + L++
Sbjct: 247 Y---GGFQDSLRVYGWEPERCFDVVVVNWGKVADLSV 280
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 268 (99.4 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 68/214 (31%), Positives = 110/214 (51%)
Query: 418 QGHSGPVYSASFSPLG-DFILSSSADTTIRLWSTKLNANLVCY-----KGHNYPVWDVQF 471
+GH+G V S + S + +LSSS D T+ +W+ + Y KGH++ V D
Sbjct: 12 EGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCVI 71
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+ G Y S+S D+T R+W + R GH +DV V + + I +GS D++++L
Sbjct: 72 SSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSIKL 131
Query: 532 WDVSSGECVRIFI--GHRSMILSLAMSPDGR--YMASGDEDGTIMMWDLASGRCVTPLMG 587
W+ + G+C GH + + SP+ + + S D + +W+L+S + T +G
Sbjct: 132 WN-TLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHIG 190
Query: 588 HTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTS 621
HT + T+ S +GSL ASG D T LWD+ S
Sbjct: 191 HTGYINTVTISPDGSLCASGGKDGTTMLWDLNES 224
Score = 249 (92.7 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 68/216 (31%), Positives = 104/216 (48%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GHS V S G + LS+S D T+RLW + GH V V F+
Sbjct: 60 KGHSHIVSDCVISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQ 119
Query: 478 FASSSHDRTARIWS-MDRIQPLRIMAGHLSDVDCVRWHINC-NYIATGSS-DKTVRLWDV 534
S S DR+ ++W+ + + GH V CVR+ N N + S DK V++W++
Sbjct: 120 IVSGSRDRSIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWEL 179
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
SS + IGH I ++ +SPDG ASG +DGT M+WDL + + L + +
Sbjct: 180 SSCKLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNANDE-IHA 238
Query: 595 LAYSCEGSLLASGSADCTVKLWDVTTSTKV--LKTE 628
L +S L + +A + ++D+ +KV LK E
Sbjct: 239 LVFSPNRYWLCAATASSII-IFDLEKKSKVDELKPE 273
Score = 209 (78.6 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 61/198 (30%), Positives = 102/198 (51%)
Query: 460 KGHNYPVWDVQFNPQG-HYFASSSHDRTARIWSMDRIQ-----PLRIMAGHLSDV-DCVR 512
+GHN V + + + + SSS D+T IW++ R + P R + GH V DCV
Sbjct: 12 EGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCVI 71
Query: 513 WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIM 572
Y + S DKT+RLW++++G R F+GH + +LS++ S D R + SG D +I
Sbjct: 72 SSDGA-YALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSIK 130
Query: 573 MWDLASGRCVTPLM--GHTSCVWTLAYSC--EGSLLASGSADCTVKLWDVTTSTKVLKTE 628
+W+ G C + GH+ V + +S + ++ S D VK+W+++ S K L+T+
Sbjct: 131 LWNTL-GDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELS-SCK-LQTD 187
Query: 629 EKSGTNRLRSLKTLPTKS 646
T + ++ P S
Sbjct: 188 HIGHTGYINTVTISPDGS 205
Score = 191 (72.3 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 61/215 (28%), Positives = 100/215 (46%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANL-VCYKGHNYPVWDVQF--NP 473
+ GH+ V S SFS I+S S D +I+LW+T + + KGH+ V V+F NP
Sbjct: 101 FVGHTNDVLSVSFSADNRQIVSGSRDRSIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNP 160
Query: 474 QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
Q SS D+ ++W + + GH ++ V + + A+G D T LWD
Sbjct: 161 QNPVIVSSGWDKLVKVWELSSCKLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWD 220
Query: 534 VSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPL------MG 587
++ + + + I +L SP+ RY +I+++DL V L +G
Sbjct: 221 LNESKHL-YSLNANDEIHALVFSPN-RYWLCAATASSIIIFDLEKKSKVDELKPEFAAVG 278
Query: 588 HTS----CVWTLAYSCEGSLLASGSADCTVKLWDV 618
S C+ +LA+S +G L +G D ++ W V
Sbjct: 279 KKSREPECI-SLAWSADGQTLFAGYTDNIIRAWGV 312
Score = 180 (68.4 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 41/139 (29%), Positives = 70/139 (50%)
Query: 516 NCNYIATGSSDKTVRLWDVSSGECV-----RIFIGHRSMILSLAMSPDGRYMASGDEDGT 570
N N + + S DKT+ +W+++ E R GH ++ +S DG Y S D T
Sbjct: 27 NPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCVISSDGAYALSASWDKT 86
Query: 571 IMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEK 630
+ +W+LA+G +GHT+ V ++++S + + SGS D ++KLW+ K TE K
Sbjct: 87 LRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSIKLWNTLGDCKYTITE-K 145
Query: 631 SGTNRLRSLKTLPTKSTPV 649
+ + ++ P PV
Sbjct: 146 GHSEWVSCVRFSPNPQNPV 164
Score = 111 (44.1 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 45/180 (25%), Positives = 80/180 (44%)
Query: 414 YTLYQ-GHSGPVYSASFSP--LGDFILSSSADTTIRLW---STKLNANLVCYKGHNYPVW 467
YT+ + GHS V FSP I+SS D +++W S KL + + GH +
Sbjct: 140 YTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHI---GHTGYIN 196
Query: 468 DVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDK 527
V +P G AS D T +W ++ + L + + ++ + + N ++ ++
Sbjct: 197 TVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNAN-DEIHALVFSPNRYWLCAATASS 255
Query: 528 TVRLWDVSS----GECVRIF--IGHRSM---ILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
+ ++D+ E F +G +S +SLA S DG+ + +G D I W + S
Sbjct: 256 II-IFDLEKKSKVDELKPEFAAVGKKSREPECISLAWSADGQTLFAGYTDNIIRAWGVMS 314
Score = 52 (23.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 347 FINTHNGLNCASISQDGSLVAGGFSDSSLKVWD 379
F+ N + S S D + G D S+K+W+
Sbjct: 101 FVGHTNDVLSVSFSADNRQIVSGSRDRSIKLWN 133
Score = 50 (22.7 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 349 NTHNGLNCASISQDGSLVAGGFSDSSLKVWDMA 381
++H +C IS DG+ D +L++W++A
Sbjct: 62 HSHIVSDCV-ISSDGAYALSASWDKTLRLWELA 93
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 268 (99.4 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 65/200 (32%), Positives = 102/200 (51%)
Query: 428 SFSPLGDFILSSSADTTIRLWSTKLNANLVCY----KGHNYPVWDVQFNPQGHYFASSSH 483
+++P G + S D TIR+W K N VC +GH V V ++P G+Y AS+S
Sbjct: 23 AWNPSGTLLASCGGDRTIRIWG-KDGDNWVCKSVLGEGHQRTVRKVSWSPCGNYLASASF 81
Query: 484 DRTARIW--SMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE--- 538
D T IW + + + + GH ++V V W + + +AT S DK+V +W+V E
Sbjct: 82 DATTCIWMKKKEEFECITTLEGHENEVKSVAWAPSGSLLATCSRDKSVWVWEVDEEEEYE 141
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW--DLASGRCVTPLMGHTSCVWTLA 596
CV + H + + P+ +AS D ++ ++ + C L GHTS VW+LA
Sbjct: 142 CVSVLNSHTQDVKHVVWHPNQELLASASYDDSVKLYREEEDDWVCCATLEGHTSTVWSLA 201
Query: 597 YSCEGSLLASGSADCTVKLW 616
+ G LA+ S D TV++W
Sbjct: 202 FDQTGEQLATCSDDKTVRIW 221
Score = 221 (82.9 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 55/188 (29%), Positives = 89/188 (47%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNAN--LVCYKGHNYPVWDVQFNP 473
L +GH V S+SP G+++ S+S D T +W K + +GH V V + P
Sbjct: 56 LGEGHQRTVRKVSWSPCGNYLASASFDATTCIWMKKKEEFECITTLEGHENEVKSVAWAP 115
Query: 474 QGHYFASSSHDRTARIWSMDRIQP---LRIMAGHLSDVDCVRWHINCNYIATGSSDKTVR 530
G A+ S D++ +W +D + + ++ H DV V WH N +A+ S D +V+
Sbjct: 116 SGSLLATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHVVWHPNQELLASASYDDSVK 175
Query: 531 LWDVSSGE--CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW-DLASGRCVTPLMG 587
L+ + C GH S + SLA G +A+ +D T+ +W L +G +
Sbjct: 176 LYREEEDDWVCCATLEGHTSTVWSLAFDQTGEQLATCSDDKTVRIWRQLGTGEQGSKSDP 235
Query: 588 HTSCVWTL 595
+ CV TL
Sbjct: 236 NWKCVCTL 243
Score = 197 (74.4 bits), Expect = 7.4e-13, P = 7.4e-13
Identities = 51/158 (32%), Positives = 75/158 (47%)
Query: 467 WDVQFNPQGHYFASSSHDRTARIWSMDR---IQPLRIMAGHLSDVDCVRWHINCNYIATG 523
W + +NP G AS DRT RIW D + + GH V V W NY+A+
Sbjct: 20 WFLAWNPSGTLLASCGGDRTIRIWGKDGDNWVCKSVLGEGHQRTVRKVSWSPCGNYLASA 79
Query: 524 SSDKTVRLW--DVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR- 580
S D T +W EC+ GH + + S+A +P G +A+ D ++ +W++
Sbjct: 80 SFDATTCIWMKKKEEFECITTLEGHENEVKSVAWAPSGSLLATCSRDKSVWVWEVDEEEE 139
Query: 581 --CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
CV+ L HT V + + LLAS S D +VKL+
Sbjct: 140 YECVSVLNSHTQDVKHVVWHPNQELLASASYDDSVKLY 177
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 41/133 (30%), Positives = 70/133 (52%)
Query: 493 DRIQPLRIMAGHLSDVDC--VRWHINCNYIATGSSDKTVRLW--DVSSGECVRIF-IGHR 547
D + L ++ H D C + W+ + +A+ D+T+R+W D + C + GH+
Sbjct: 3 DTLTLLSRVSAH-PDSRCWFLAWNPSGTLLASCGGDRTIRIWGKDGDNWVCKSVLGEGHQ 61
Query: 548 SMILSLAMSPDGRYMASGDEDGTIMMW--DLASGRCVTPLMGHTSCVWTLAYSCEGSLLA 605
+ ++ SP G Y+AS D T +W C+T L GH + V ++A++ GSLLA
Sbjct: 62 RTVRKVSWSPCGNYLASASFDATTCIWMKKKEEFECITTLEGHENEVKSVAWAPSGSLLA 121
Query: 606 SGSADCTVKLWDV 618
+ S D +V +W+V
Sbjct: 122 TCSRDKSVWVWEV 134
Score = 130 (50.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 34/130 (26%), Positives = 60/130 (46%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK---GHNYPVWDVQF 471
T +GH V S +++P G + + S D ++ +W C H V V +
Sbjct: 99 TTLEGHENEVKSVAWAPSGSLLATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHVVW 158
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPL--RIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
+P AS+S+D + +++ + + + GH S V + + +AT S DKTV
Sbjct: 159 HPNQELLASASYDDSVKLYREEEDDWVCCATLEGHTSTVWSLAFDQTGEQLATCSDDKTV 218
Query: 530 RLW-DVSSGE 538
R+W + +GE
Sbjct: 219 RIWRQLGTGE 228
Score = 44 (20.5 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 16/65 (24%), Positives = 30/65 (46%)
Query: 348 INTHNGLNCASISQD--GSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGE-NDTTPREDI 404
++ H C ++ + G+L+A D ++++W K G V + GE + T R+
Sbjct: 11 VSAHPDSRCWFLAWNPSGTLLASCGGDRTIRIW--GKDGDNWVCKSVLGEGHQRTVRKVS 68
Query: 405 IGPNG 409
P G
Sbjct: 69 WSPCG 73
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 268 (99.4 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 61/227 (26%), Positives = 108/227 (47%)
Query: 405 IGPNGR--KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGH 462
I P GR R+ +GH +Y+ + ++S+S D + +W + +
Sbjct: 37 IDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLR 96
Query: 463 NYPVWDVQFNPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSDVDCVRWHINCN 518
+ V + P G+Y A D I+++ ++ R +AGH + C R+ ++ N
Sbjct: 97 SSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF-LDDN 155
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
I T S D T LWD+ +G+ F GH ++SL+++PD R SG D + +WD+
Sbjct: 156 QIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE 215
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
G C GH S + + + G+ A+GS D T +L+D+ +++
Sbjct: 216 GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Score = 246 (91.7 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 61/203 (30%), Positives = 100/203 (49%)
Query: 419 GHSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH+G + F L D I++SS DTT LW + + GH V + P
Sbjct: 141 GHTGYLSCCRF--LDDNQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRL 198
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
F S + D +A++W + + GH SD++ + + N N ATGS D T RL+D+ +
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD 258
Query: 538 ECVRIFIGHRSMIL---SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ + ++ H ++I S+A S GR + +G +D +WD L GH + V
Sbjct: 259 QELMVY-SHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSC 317
Query: 595 LAYSCEGSLLASGSADCTVKLWD 617
L + +G +A+GS D +K+W+
Sbjct: 318 LGVTDDGMAVATGSWDSFLKIWN 340
Score = 177 (67.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 39/163 (23%), Positives = 74/163 (45%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQ 474
T + GH+G V S S +P +S + D + +LW + + GH + + F P
Sbjct: 178 TTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPN 237
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGH--LSDVDCVRWHINCNYIATGSSDKTVRLW 532
G+ FA+ S D T R++ + Q L + + + + V + + + G D +W
Sbjct: 238 GNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVW 297
Query: 533 DVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWD 575
D + + GH + + L ++ DG +A+G D + +W+
Sbjct: 298 DALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 46/201 (22%), Positives = 81/201 (40%)
Query: 351 HNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVS-SGLQGEN---DTTPREDII 405
H G L+C D +V D++ +WD+ + GQQ + +G G+ P +
Sbjct: 142 HTGYLSCCRFLDDNQIVTSS-GDTTCALWDI-ETGQQTTTFAGHTGDVMSLSLAPDTRLF 199
Query: 406 GPNGRKRSYTLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
S L+ GH + + F P G+ + S D T RL+ + +
Sbjct: 200 VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259
Query: 455 NLVCYKGHNY--PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVR 512
L+ Y N + V F+ G + D +W + ++AGH + V C+
Sbjct: 260 ELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLG 319
Query: 513 WHINCNYIATGSSDKTVRLWD 533
+ +ATGS D +++W+
Sbjct: 320 VTDDGMAVATGSWDSFLKIWN 340
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 268 (99.4 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 61/227 (26%), Positives = 108/227 (47%)
Query: 405 IGPNGR--KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGH 462
I P GR R+ +GH +Y+ + ++S+S D + +W + +
Sbjct: 37 IDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLR 96
Query: 463 NYPVWDVQFNPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSDVDCVRWHINCN 518
+ V + P G+Y A D I+++ ++ R +AGH + C R+ ++ N
Sbjct: 97 SSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF-LDDN 155
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
I T S D T LWD+ +G+ F GH ++SL+++PD R SG D + +WD+
Sbjct: 156 QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE 215
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
G C GH S + + + G+ A+GS D T +L+D+ +++
Sbjct: 216 GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Score = 239 (89.2 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 60/203 (29%), Positives = 99/203 (48%)
Query: 419 GHSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH+G + F L D I++SS DTT LW + + GH V + P
Sbjct: 141 GHTGYLSCCRF--LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL 198
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
F S + D +A++W + + GH SD++ + + N N ATGS D T RL+D+ +
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD 258
Query: 538 ECVRIFIGHRSMIL---SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ + + H ++I S++ S GR + +G +D +WD L GH + V
Sbjct: 259 QELMTY-SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSC 317
Query: 595 LAYSCEGSLLASGSADCTVKLWD 617
L + +G +A+GS D +K+W+
Sbjct: 318 LGVTDDGMAVATGSWDSFLKIWN 340
Score = 135 (52.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 46/201 (22%), Positives = 81/201 (40%)
Query: 351 HNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVS-SGLQGEN---DTTPREDII 405
H G L+C D +V D++ +WD+ + GQQ + +G G+ P +
Sbjct: 142 HTGYLSCCRFLDDNQIVTSS-GDTTCALWDI-ETGQQTTTFTGHTGDVMSLSLAPDTRLF 199
Query: 406 GPNGRKRSYTLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
S L+ GH + + F P G+ + S D T RL+ + +
Sbjct: 200 VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259
Query: 455 NLVCYKGHNY--PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVR 512
L+ Y N + V F+ G + D +W + ++AGH + V C+
Sbjct: 260 ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLG 319
Query: 513 WHINCNYIATGSSDKTVRLWD 533
+ +ATGS D +++W+
Sbjct: 320 VTDDGMAVATGSWDSFLKIWN 340
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 268 (99.4 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 61/227 (26%), Positives = 108/227 (47%)
Query: 405 IGPNGR--KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGH 462
I P GR R+ +GH +Y+ + ++S+S D + +W + +
Sbjct: 37 IDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLR 96
Query: 463 NYPVWDVQFNPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSDVDCVRWHINCN 518
+ V + P G+Y A D I+++ ++ R +AGH + C R+ ++ N
Sbjct: 97 SSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF-LDDN 155
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
I T S D T LWD+ +G+ F GH ++SL+++PD R SG D + +WD+
Sbjct: 156 QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE 215
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
G C GH S + + + G+ A+GS D T +L+D+ +++
Sbjct: 216 GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Score = 239 (89.2 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 60/203 (29%), Positives = 99/203 (48%)
Query: 419 GHSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH+G + F L D I++SS DTT LW + + GH V + P
Sbjct: 141 GHTGYLSCCRF--LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL 198
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
F S + D +A++W + + GH SD++ + + N N ATGS D T RL+D+ +
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD 258
Query: 538 ECVRIFIGHRSMIL---SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ + + H ++I S++ S GR + +G +D +WD L GH + V
Sbjct: 259 QELMTY-SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSC 317
Query: 595 LAYSCEGSLLASGSADCTVKLWD 617
L + +G +A+GS D +K+W+
Sbjct: 318 LGVTDDGMAVATGSWDSFLKIWN 340
Score = 135 (52.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 46/201 (22%), Positives = 81/201 (40%)
Query: 351 HNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVS-SGLQGEN---DTTPREDII 405
H G L+C D +V D++ +WD+ + GQQ + +G G+ P +
Sbjct: 142 HTGYLSCCRFLDDNQIVTSS-GDTTCALWDI-ETGQQTTTFTGHTGDVMSLSLAPDTRLF 199
Query: 406 GPNGRKRSYTLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
S L+ GH + + F P G+ + S D T RL+ + +
Sbjct: 200 VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259
Query: 455 NLVCYKGHNY--PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVR 512
L+ Y N + V F+ G + D +W + ++AGH + V C+
Sbjct: 260 ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLG 319
Query: 513 WHINCNYIATGSSDKTVRLWD 533
+ +ATGS D +++W+
Sbjct: 320 VTDDGMAVATGSWDSFLKIWN 340
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 268 (99.4 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 61/227 (26%), Positives = 108/227 (47%)
Query: 405 IGPNGR--KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGH 462
I P GR R+ +GH +Y+ + ++S+S D + +W + +
Sbjct: 37 IDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLR 96
Query: 463 NYPVWDVQFNPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSDVDCVRWHINCN 518
+ V + P G+Y A D I+++ ++ R +AGH + C R+ ++ N
Sbjct: 97 SSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF-LDDN 155
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
I T S D T LWD+ +G+ F GH ++SL+++PD R SG D + +WD+
Sbjct: 156 QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE 215
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
G C GH S + + + G+ A+GS D T +L+D+ +++
Sbjct: 216 GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Score = 239 (89.2 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 60/203 (29%), Positives = 99/203 (48%)
Query: 419 GHSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH+G + F L D I++SS DTT LW + + GH V + P
Sbjct: 141 GHTGYLSCCRF--LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL 198
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
F S + D +A++W + + GH SD++ + + N N ATGS D T RL+D+ +
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD 258
Query: 538 ECVRIFIGHRSMIL---SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ + + H ++I S++ S GR + +G +D +WD L GH + V
Sbjct: 259 QELMTY-SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSC 317
Query: 595 LAYSCEGSLLASGSADCTVKLWD 617
L + +G +A+GS D +K+W+
Sbjct: 318 LGVTDDGMAVATGSWDSFLKIWN 340
Score = 135 (52.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 46/201 (22%), Positives = 81/201 (40%)
Query: 351 HNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVS-SGLQGEN---DTTPREDII 405
H G L+C D +V D++ +WD+ + GQQ + +G G+ P +
Sbjct: 142 HTGYLSCCRFLDDNQIVTSS-GDTTCALWDI-ETGQQTTTFTGHTGDVMSLSLAPDTRLF 199
Query: 406 GPNGRKRSYTLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
S L+ GH + + F P G+ + S D T RL+ + +
Sbjct: 200 VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259
Query: 455 NLVCYKGHNY--PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVR 512
L+ Y N + V F+ G + D +W + ++AGH + V C+
Sbjct: 260 ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLG 319
Query: 513 WHINCNYIATGSSDKTVRLWD 533
+ +ATGS D +++W+
Sbjct: 320 VTDDGMAVATGSWDSFLKIWN 340
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 268 (99.4 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 61/227 (26%), Positives = 108/227 (47%)
Query: 405 IGPNGR--KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGH 462
I P GR R+ +GH +Y+ + ++S+S D + +W + +
Sbjct: 37 IDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLR 96
Query: 463 NYPVWDVQFNPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSDVDCVRWHINCN 518
+ V + P G+Y A D I+++ ++ R +AGH + C R+ ++ N
Sbjct: 97 SSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF-LDDN 155
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
I T S D T LWD+ +G+ F GH ++SL+++PD R SG D + +WD+
Sbjct: 156 QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE 215
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
G C GH S + + + G+ A+GS D T +L+D+ +++
Sbjct: 216 GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Score = 239 (89.2 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 60/203 (29%), Positives = 99/203 (48%)
Query: 419 GHSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH+G + F L D I++SS DTT LW + + GH V + P
Sbjct: 141 GHTGYLSCCRF--LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL 198
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
F S + D +A++W + + GH SD++ + + N N ATGS D T RL+D+ +
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD 258
Query: 538 ECVRIFIGHRSMIL---SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ + + H ++I S++ S GR + +G +D +WD L GH + V
Sbjct: 259 QELMTY-SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSC 317
Query: 595 LAYSCEGSLLASGSADCTVKLWD 617
L + +G +A+GS D +K+W+
Sbjct: 318 LGVTDDGMAVATGSWDSFLKIWN 340
Score = 135 (52.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 46/201 (22%), Positives = 81/201 (40%)
Query: 351 HNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVS-SGLQGEN---DTTPREDII 405
H G L+C D +V D++ +WD+ + GQQ + +G G+ P +
Sbjct: 142 HTGYLSCCRFLDDNQIVTSS-GDTTCALWDI-ETGQQTTTFTGHTGDVMSLSLAPDTRLF 199
Query: 406 GPNGRKRSYTLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
S L+ GH + + F P G+ + S D T RL+ + +
Sbjct: 200 VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259
Query: 455 NLVCYKGHNY--PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVR 512
L+ Y N + V F+ G + D +W + ++AGH + V C+
Sbjct: 260 ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLG 319
Query: 513 WHINCNYIATGSSDKTVRLWD 533
+ +ATGS D +++W+
Sbjct: 320 VTDDGMAVATGSWDSFLKIWN 340
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 268 (99.4 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 61/227 (26%), Positives = 108/227 (47%)
Query: 405 IGPNGR--KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGH 462
I P GR R+ +GH +Y+ + ++S+S D + +W + +
Sbjct: 37 IDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLR 96
Query: 463 NYPVWDVQFNPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSDVDCVRWHINCN 518
+ V + P G+Y A D I+++ ++ R +AGH + C R+ ++ N
Sbjct: 97 SSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF-LDDN 155
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
I T S D T LWD+ +G+ F GH ++SL+++PD R SG D + +WD+
Sbjct: 156 QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE 215
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
G C GH S + + + G+ A+GS D T +L+D+ +++
Sbjct: 216 GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Score = 239 (89.2 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 60/203 (29%), Positives = 99/203 (48%)
Query: 419 GHSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH+G + F L D I++SS DTT LW + + GH V + P
Sbjct: 141 GHTGYLSCCRF--LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL 198
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
F S + D +A++W + + GH SD++ + + N N ATGS D T RL+D+ +
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD 258
Query: 538 ECVRIFIGHRSMIL---SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ + + H ++I S++ S GR + +G +D +WD L GH + V
Sbjct: 259 QELMTY-SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSC 317
Query: 595 LAYSCEGSLLASGSADCTVKLWD 617
L + +G +A+GS D +K+W+
Sbjct: 318 LGVTDDGMAVATGSWDSFLKIWN 340
Score = 135 (52.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 46/201 (22%), Positives = 81/201 (40%)
Query: 351 HNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVS-SGLQGEN---DTTPREDII 405
H G L+C D +V D++ +WD+ + GQQ + +G G+ P +
Sbjct: 142 HTGYLSCCRFLDDNQIVTSS-GDTTCALWDI-ETGQQTTTFTGHTGDVMSLSLAPDTRLF 199
Query: 406 GPNGRKRSYTLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
S L+ GH + + F P G+ + S D T RL+ + +
Sbjct: 200 VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259
Query: 455 NLVCYKGHNY--PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVR 512
L+ Y N + V F+ G + D +W + ++AGH + V C+
Sbjct: 260 ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLG 319
Query: 513 WHINCNYIATGSSDKTVRLWD 533
+ +ATGS D +++W+
Sbjct: 320 VTDDGMAVATGSWDSFLKIWN 340
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 267 (99.0 bits), Expect = 3.3e-22, P = 3.3e-22
Identities = 70/219 (31%), Positives = 109/219 (49%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GHS V S G F LS S D +RLW + GH V V F+
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQI 120
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAG--HLSDVDCVRWHINCNY--IATGSSDKTVRLWDV 534
S+S DRT ++W+ I G H V CVR+ N I + S DKTV++W++
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL 180
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ + +GH + ++A+SPDG ASG +DG I++WDLA G+ + L S + +
Sbjct: 181 QNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG-SIIHS 239
Query: 595 LAYSCEGSLLASGSADCTVKLWDVTTSTKV--LKTEEKS 631
L +S L + + + ++++WD+ + + V LK + KS
Sbjct: 240 LCFSPNRYWLCAATEN-SIRIWDLESKSVVEDLKVDLKS 277
Score = 243 (90.6 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 67/228 (29%), Positives = 114/228 (50%)
Query: 416 LYQGHSGPVYSASFSPL--GDFILSSSADTTIRLWS-TKLNANL-VCYK---GHNYPVWD 468
+ + H+ + +A +P+ D I+++S D +I LW TK + + V + GH++ V D
Sbjct: 10 IMRAHTD-IVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVED 68
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
V + G + S S D R+W + + R GH DV V + + I + S D+T
Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRT 128
Query: 529 VRLWDVSSGECVRIFI---GHRSMILSLAMSPDGRY--MASGDEDGTIMMWDLASGRCVT 583
++LW+ + GEC GH+ + + SP+ + S D T+ +W+L + +
Sbjct: 129 IKLWN-TLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRN 187
Query: 584 PLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKS 631
L+GH+ + T+A S +GSL ASG D + LWD+ K+ E S
Sbjct: 188 SLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS 235
Score = 187 (70.9 bits), Expect = 5.3e-15, Sum P(3) = 5.3e-15
Identities = 50/174 (28%), Positives = 87/174 (50%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD--VQFNPQ 474
+ GH+ V S +FS I+S+S D TI+LW+T +G + W V+F+P
Sbjct: 101 FVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPN 160
Query: 475 GHY--FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLW 532
S+S D+T ++W++ + + GH ++ V + + A+G D + LW
Sbjct: 161 TLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLW 220
Query: 533 DVSSGECVRIF-IGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPL 585
D++ G+ +++ + S+I SL SP+ RY + +I +WDL S V L
Sbjct: 221 DLAEGK--KLYSLEAGSIIHSLCFSPN-RYWLCAATENSIRIWDLESKSVVEDL 271
Score = 54 (24.1 bits), Expect = 5.3e-15, Sum P(3) = 5.3e-15
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 359 ISQDGSLVAGGFSDSSLKVWDMA 381
+S DG G D L++WD+A
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLA 93
Score = 53 (23.7 bits), Expect = 5.3e-15, Sum P(3) = 5.3e-15
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 594 TLAYSCEGSLLASGSADCTVKLWDV 618
+L +S +GS L SG D V++W +
Sbjct: 299 SLNWSADGSTLFSGYTDGVVRVWGI 323
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 280 (103.6 bits), Expect = 4.0e-22, P = 4.0e-22
Identities = 73/238 (30%), Positives = 117/238 (49%)
Query: 376 KVWDM-AKL--GQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPL 432
KV ++ AKL ++ V G +N TP E I P K S T GH + F P+
Sbjct: 64 KVMELEAKLTEAEKEVIEGAPTKNKRTPGEWIPRPP-EKFSLT---GHRASITRVIFHPI 119
Query: 433 GDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSM 492
++S+S D TIR+W + KGH V DV F+ QG AS S D + ++W
Sbjct: 120 FALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDF 179
Query: 493 DR-IQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMIL 551
+ + ++ M GH +V V + +Y+ + S D+T+++W+V++G CV+ + GHR +
Sbjct: 180 QQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVR 239
Query: 552 SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSA 609
+ + +G A+ D TI +W S C L H V +A++ E + A A
Sbjct: 240 MVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEA 297
Score = 256 (95.2 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 59/184 (32%), Positives = 92/184 (50%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH + V F+P S+S D T RIW + + R + GH V V + +
Sbjct: 106 GHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLL 165
Query: 521 ATGSSDKTVRLWDVS-SGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
A+ S+D +++LWD S EC++ GH + S+A P G Y+ S D TI MW++A+G
Sbjct: 166 ASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATG 225
Query: 580 RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSL 639
CV GH V + EGS+ A+ S D T+++W T++K K E + + + +
Sbjct: 226 YCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW--LTNSKDCKVELRDHEHTVECI 283
Query: 640 KTLP 643
P
Sbjct: 284 AWAP 287
Score = 240 (89.5 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 62/210 (29%), Positives = 104/210 (49%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH V S +F P GD++LS+S D TI++W + Y GH V V+ + +G F
Sbjct: 191 GHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIF 250
Query: 479 ASSSHDRTARIWSMDRIQPLRI-MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
A+ S+D+T R+W + + ++ + H V+C+ W A ++ + + +
Sbjct: 251 ATCSNDQTIRVW-LTNSKDCKVELRDHEHTVECIAW-------APEAAASAIN--EAAGA 300
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY 597
+ + GH G ++ASG D TI +WD++ G C+ L GH + V LA+
Sbjct: 301 DNKK---GHHQ----------GPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAF 347
Query: 598 SCEGSLLASGSADCTVKLWDVTTSTKVLKT 627
G L S S D T+++WD+ + +KT
Sbjct: 348 HPGGKYLVSASDDKTIRVWDLRNK-RCMKT 376
Score = 215 (80.7 bits), Expect = 8.7e-15, Sum P(2) = 8.7e-15
Identities = 41/109 (37%), Positives = 62/109 (56%)
Query: 509 DCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDED 568
D + H ++A+GS DKT+R+WDVS G C+ GH + + LA P G+Y+ S +D
Sbjct: 301 DNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDD 360
Query: 569 GTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
TI +WDL + RC+ L H ++ + + SGS D TVK+W+
Sbjct: 361 KTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
Score = 206 (77.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLV-CYKGHNYPVWDVQFNPQGH 476
+GH+ V +F G + S SAD +I+LW + + + GH++ V V F P G
Sbjct: 147 KGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGD 206
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
Y S+S DRT ++W + ++ GH V VR HI + AT S+D+T+R+W +S
Sbjct: 207 YVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNS 266
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDG 569
+C H + +A +P+ A + G
Sbjct: 267 KDCKVELRDHEHTVECIAWAPEAAASAINEAAG 299
Score = 170 (64.9 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 32/101 (31%), Positives = 55/101 (54%)
Query: 433 GDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSM 492
G F+ S S D TIR+W + L+ GH+ V + F+P G Y S+S D+T R+W +
Sbjct: 309 GPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDL 368
Query: 493 DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
+ ++ + H + +H Y+ +GS D+TV++W+
Sbjct: 369 RNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
Score = 165 (63.1 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 32/102 (31%), Positives = 54/102 (52%)
Query: 474 QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
QG + AS S D+T RIW + L ++GH + V + +H Y+ + S DKT+R+WD
Sbjct: 308 QGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWD 367
Query: 534 VSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWD 575
+ + C++ H+ S+ Y+ SG D T+ +W+
Sbjct: 368 LRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
Score = 45 (20.9 bits), Expect = 8.7e-15, Sum P(2) = 8.7e-15
Identities = 18/74 (24%), Positives = 35/74 (47%)
Query: 318 TEVEQSILEDLRNRVHLSSAALPSVSFYTF------INTHNGL--NCASIS--QDGSLVA 367
T+ Q + D + ++ S +A S+ + F I T +G N +S++ G V
Sbjct: 150 TDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVL 209
Query: 368 GGFSDSSLKVWDMA 381
D ++K+W++A
Sbjct: 210 SASRDRTIKMWEVA 223
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 266 (98.7 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 63/200 (31%), Positives = 103/200 (51%)
Query: 428 SFSPLGDFILSSSADTTIRLWSTKLNA----NLVCYKGHNYPVWDVQFNPQGHYFASSSH 483
+++P G + S D ++R+W + ++ +++C +GH V V ++P G+Y AS+S
Sbjct: 23 AWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLC-EGHQRTVRKVAWSPCGNYLASASF 81
Query: 484 DRTARIWSM--DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG---E 538
D T IW D + + + GH ++V V W + N +AT S DK+V +W+V E
Sbjct: 82 DATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYE 141
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW--DLASGRCVTPLMGHTSCVWTLA 596
CV + H + + P +AS D T+ ++ + C L GH S VW+LA
Sbjct: 142 CVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLA 201
Query: 597 YSCEGSLLASGSADCTVKLW 616
+ G LAS S D TV++W
Sbjct: 202 FDPSGQRLASCSDDRTVRIW 221
Score = 224 (83.9 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 51/167 (30%), Positives = 84/167 (50%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY---KGHNYPVWDVQFN 472
L +GH V ++SP G+++ S+S D T +W K + C +GH V V +
Sbjct: 56 LCEGHQRTVRKVAWSPCGNYLASASFDATTCIWK-KNEDDFECVTTLEGHENEVKSVAWA 114
Query: 473 PQGHYFASSSHDRTARIWSMDR---IQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
P G+ A+ S D++ +W +D + + ++ H DV V WH + +A+ S D TV
Sbjct: 115 PSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTV 174
Query: 530 RLWDVSSGE--CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
+L+ + C GH S + SLA P G+ +AS +D T+ +W
Sbjct: 175 KLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW 221
Score = 201 (75.8 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 52/158 (32%), Positives = 76/158 (48%)
Query: 467 WDVQFNPQGHYFASSSHDRTARIWSMDR---IQPLRIMAGHLSDVDCVRWHINCNYIATG 523
W + +NP G AS DR+ RIW + I + GH V V W NY+A+
Sbjct: 20 WFLAWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSPCGNYLASA 79
Query: 524 SSDKTVRLWDVSSG--ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG-- 579
S D T +W + ECV GH + + S+A +P G +A+ D ++ +W++
Sbjct: 80 SFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE 139
Query: 580 -RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
CV+ L HT V + + LLAS S D TVKL+
Sbjct: 140 YECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLY 177
Score = 157 (60.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 43/127 (33%), Positives = 68/127 (53%)
Query: 499 RIMAGHLSDVDC--VRWHINCNYIATGSSDKTVRLW--DVSSGECVRIFI-GHRSMILSL 553
RI+A H D C + W+ +A+ D++VR+W + S C + GH+ + +
Sbjct: 10 RILA-H-PDSRCWFLAWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKV 67
Query: 554 AMSPDGRYMASGDEDGTIMMWDLASG--RCVTPLMGHTSCVWTLAYSCEGSLLASGSADC 611
A SP G Y+AS D T +W CVT L GH + V ++A++ G+LLA+ S D
Sbjct: 68 AWSPCGNYLASASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK 127
Query: 612 TVKLWDV 618
+V +W+V
Sbjct: 128 SVWVWEV 134
Score = 121 (47.7 bits), Expect = 0.00028, P = 0.00028
Identities = 31/123 (25%), Positives = 58/123 (47%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK---GHNYPVWDVQF 471
T +GH V S +++P G+ + + S D ++ +W C H V V +
Sbjct: 99 TTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW 158
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPL--RIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
+P AS+S+D T +++ + + + GH S V + + + +A+ S D+TV
Sbjct: 159 HPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTV 218
Query: 530 RLW 532
R+W
Sbjct: 219 RIW 221
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 286 (105.7 bits), Expect = 4.9e-22, P = 4.9e-22
Identities = 66/201 (32%), Positives = 98/201 (48%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY-KGHNYPVWDVQFNPQGHY 477
G P+ SFS G + + S +LW N + K H DV F+P
Sbjct: 253 GDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDC 312
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
A++S DRTA++W D L+ GHL + V +H + Y+ T S DKT RLWD+++G
Sbjct: 313 LATASADRTAKLWKTDGTL-LQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTG 371
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY 597
+ + GH + +A DG AS D +WDL +GR + GH V+++ +
Sbjct: 372 AELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNF 431
Query: 598 SCEGSLLASGSADCTVKLWDV 618
S G LASG D ++WD+
Sbjct: 432 SPNGYHLASGGEDNQCRIWDL 452
Score = 281 (104.0 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 77/292 (26%), Positives = 133/292 (45%)
Query: 354 LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT----TPREDIIGPNG 409
L S S+DG ++A K+W+M ++ E T +P +D +
Sbjct: 258 LTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATAS 317
Query: 410 RKRSYTL----------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
R+ L ++GH + +F P G ++ ++S D T RLW A L+
Sbjct: 318 ADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQ 377
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
+GH+ V+ + F G AS D AR+W + + + + GH+ V V + N +
Sbjct: 378 EGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYH 437
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSP-DGRYMASGDEDGTIMMWDLAS 578
+A+G D R+WD+ + + I H +++ + P +G ++A+ D + +W
Sbjct: 438 LASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRD 497
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEK 630
V L GH S V +L + + S +A+ S D T+KLW T+S + EEK
Sbjct: 498 FSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW--TSSGNDDEDEEK 547
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 288 (106.4 bits), Expect = 5.5e-22, Sum P(2) = 5.5e-22
Identities = 66/222 (29%), Positives = 109/222 (49%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQ 474
TL Q H GP+++ ++ G+FILS+ D T +W + H+ P DV +
Sbjct: 261 TLGQ-HKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-S 318
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDV 534
+ FAS S D + + + +P++ GH ++V+ ++W N +A+ S D T+++W +
Sbjct: 319 NNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM 378
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGR---------YMASGDE---DGTIMMWDLASGRCV 582
CV H I ++ SP G +AS D D T+ +WD+ G C+
Sbjct: 379 KQDSCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWDVDRGICI 438
Query: 583 TPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
L H V+++A+S +G LASGS D V +W+ T V
Sbjct: 439 HTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALV 480
Score = 245 (91.3 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 59/211 (27%), Positives = 102/211 (48%)
Query: 420 HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFA 479
HS P + F S S D I + + + ++GH V ++++P G+ A
Sbjct: 307 HSAPALDVDWQSNNTFA-SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLA 365
Query: 480 SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW--------HINCNYIA----TGSSDK 527
S S D T +IWSM + + + H ++ ++W + N N + + S D
Sbjct: 366 SCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDS 425
Query: 528 TVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMG 587
TVRLWDV G C+ H+ + S+A SPDGRY+ASG D + +W+ +G V G
Sbjct: 426 TVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG 485
Query: 588 HTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
T ++ + ++ G + + ++D +V + D+
Sbjct: 486 -TGGIFEVCWNAAGDKVGASASDGSVCVLDL 515
Score = 240 (89.5 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 67/241 (27%), Positives = 115/241 (47%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLW-----STKLNANLV---CYK--GHNYP-- 465
+GH V+ +++P+ D + S S D+T R+W ST + LV C + G + P
Sbjct: 166 RGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSN 225
Query: 466 --VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATG 523
V + +N +G A+ S+D ARIW+ D + H + ++W+ N+I +
Sbjct: 226 KDVTSLDWNSEGTLLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKKGNFILSA 284
Query: 524 SSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVT 583
DKT +WD +GE + F H + L + + + AS D I + L R +
Sbjct: 285 GVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPIK 343
Query: 584 PLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLP 643
GHT+ V + + G+LLAS S D T+K+W + + V + ++ + ++K P
Sbjct: 344 TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCV--HDLQAHNKEIYTIKWSP 401
Query: 644 T 644
T
Sbjct: 402 T 402
Score = 208 (78.3 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 67/267 (25%), Positives = 119/267 (44%)
Query: 365 LVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPV 424
L+A G DS+ ++W++++ + G R I R+ + V
Sbjct: 183 LLASGSGDSTARIWNLSE-------NSTSGSTQLVLRHCI-----REGGQDVPSNKD--V 228
Query: 425 YSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKG-HNYPVWDVQFNPQGHYFASSSH 483
S ++ G + + S D R+W TK + NL G H P++ +++N +G++ S+
Sbjct: 229 TSLDWNSEGTLLATGSYDGFARIW-TK-DGNLASTLGQHKGPIFALKWNKKGNFILSAGV 286
Query: 484 DRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIF 543
D+T IW + + H + V W N N A+ S+D + + + ++ F
Sbjct: 287 DKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSN-NTFASCSTDMCIHVCKLGQDRPIKTF 345
Query: 544 IGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS- 602
GH + + ++ P G +AS +D T+ +W + CV L H ++T+ +S G
Sbjct: 346 QGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPTGPG 405
Query: 603 --------LLAS---GSADCTVKLWDV 618
+LAS S D TV+LWDV
Sbjct: 406 TNNPNANLMLASLDSASFDSTVRLWDV 432
Score = 194 (73.4 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 48/180 (26%), Positives = 88/180 (48%)
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
G+ R +QGH+ V + + P G+ + S S D T+++WS K ++ + + HN ++
Sbjct: 337 GQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYT 396
Query: 469 VQFNPQGH---------YFAS---SSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN 516
++++P G AS +S D T R+W +DR + + H V V + +
Sbjct: 397 IKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPD 456
Query: 517 CNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
Y+A+GS DK V +W+ +G V + G I + + G + + DG++ + DL
Sbjct: 457 GRYLASGSFDKCVHIWNTQTGALVHSYRGTGG-IFEVCWNAAGDKVGASASDGSVCVLDL 515
Score = 143 (55.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 49/202 (24%), Positives = 83/202 (41%)
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQP---LRIMAGHL-------- 505
V +GH V+ +NP AS S D TARIW++ +++ H
Sbjct: 163 VVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDV 222
Query: 506 ---SDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYM 562
DV + W+ +ATGS D R+W G H+ I +L + G ++
Sbjct: 223 PSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKGNFI 281
Query: 563 ASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTST 622
S D T ++WD +G H++ + + + AS S D + + +
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQD- 339
Query: 623 KVLKTEEKSGTNRLRSLKTLPT 644
+ +KT + TN + ++K PT
Sbjct: 340 RPIKTFQ-GHTNEVNAIKWDPT 360
Score = 130 (50.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 43/148 (29%), Positives = 61/148 (41%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT--TPRED 403
TF N +N G+L+A D +LK+W M Q + LQ N T +
Sbjct: 344 TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMK---QDSCVHDLQAHNKEIYTIKWS 400
Query: 404 IIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHN 463
GP G + P + + L S+S D+T+RLW + H
Sbjct: 401 PTGP-----------GTNNPNANLMLASLD----SASFDSTVRLWDVDRGICIHTLTKHQ 445
Query: 464 YPVWDVQFNPQGHYFASSSHDRTARIWS 491
PV+ V F+P G Y AS S D+ IW+
Sbjct: 446 EPVYSVAFSPDGRYLASGSFDKCVHIWN 473
Score = 39 (18.8 bits), Expect = 5.5e-22, Sum P(2) = 5.5e-22
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 7 VEF-VATYLKKKGFSEAENALQAEIQRNKSSNNTN 40
V F V YL++ GFS + A I+ + S +N N
Sbjct: 9 VNFLVYRYLQESGFSHS--AFTFGIESHISQSNIN 41
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 281 (104.0 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
Identities = 56/195 (28%), Positives = 99/195 (50%)
Query: 423 PVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSS 482
P + S P + S +AD +++LWS + + +GH V V ++P G + ++
Sbjct: 283 PKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTC 342
Query: 483 HDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRI 542
+DR+ R+W ++ + + GH V + +H + + TG D R+WD+ +G C+
Sbjct: 343 YDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMF 402
Query: 543 FIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS-CEG 601
GH I + SP+G ++A+G D T +WDL RCV + H + V + + G
Sbjct: 403 LEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHG 462
Query: 602 SLLASGSADCTVKLW 616
+ L +G+ D T K+W
Sbjct: 463 NFLLTGAYDNTAKIW 477
Score = 268 (99.4 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 56/200 (28%), Positives = 98/200 (49%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V + P G F+ ++ D + RLW + ++ +GH+ V+D+ F+ G
Sbjct: 320 EGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSL 379
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
+ D R+W + + + + GHL ++ + + N +IATGS D T ++WD+
Sbjct: 380 AGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQR 439
Query: 538 ECVRIFIGHRSMILSLAMSP-DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
CV H++++ + P G ++ +G D T +W + L GH V L
Sbjct: 440 RCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLD 499
Query: 597 YSCEGSLLASGSADCTVKLW 616
S +G L+A+ S D T KLW
Sbjct: 500 ISSDGQLIATCSYDRTFKLW 519
Score = 265 (98.3 bits), Expect = 4.1e-20, Sum P(2) = 4.1e-20
Identities = 62/209 (29%), Positives = 103/209 (49%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLV-CYKGHN--------YPVWDV 469
G P+ FSP + ++ +LWS + NL+ +GHN +P V
Sbjct: 229 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVP-DCNLLHTLRGHNTNVGAIVFHPKSTV 287
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
+P+ AS + D + ++WS+D +P+ + GH V V WH + ++ T D++
Sbjct: 288 SLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSW 347
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
RLWD+ + E + GH + +A DG +G D +WDL +GRC+ L GH
Sbjct: 348 RLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL 407
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLWDV 618
++ + +S G +A+GS D T K+WD+
Sbjct: 408 KEIYGINFSPNGYHIATGSGDNTCKVWDL 436
Score = 179 (68.1 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 44/183 (24%), Positives = 85/183 (46%)
Query: 455 NLVCYK-GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW 513
N C + G + P+ F+P A++ ++WS+ L + GH ++V + +
Sbjct: 222 NNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVF 281
Query: 514 HINCNY--------IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASG 565
H +A+ ++D +V+LW + S E V GH + + P GR++ +
Sbjct: 282 HPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTT 341
Query: 566 DEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
D + +WDL + + GH+ V+ +A+ +GSL +G D ++WD+ T ++
Sbjct: 342 CYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIM 401
Query: 626 KTE 628
E
Sbjct: 402 FLE 404
Score = 170 (64.9 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 38/122 (31%), Positives = 60/122 (49%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
R +GH +Y +FSP G I + S D T ++W + + H V V+F
Sbjct: 398 RCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKF 457
Query: 472 NP-QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVR 530
P G++ + ++D TA+IW+ PL+ +AGH V + + IAT S D+T +
Sbjct: 458 EPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFK 517
Query: 531 LW 532
LW
Sbjct: 518 LW 519
Score = 47 (21.6 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
Identities = 20/86 (23%), Positives = 39/86 (45%)
Query: 222 INQKEVHWGLLEDSLENRLEK--TGLIS-DSEKAEGENKEAEIDENKKRPVE---GGKQG 275
+ + +++G LE+ RL K +G++ D KA E I + +E +Q
Sbjct: 25 VKKPHIYYGSLEEKERERLAKGESGILGKDGLKAGIEAGNINITSGEVFEIEEHISERQA 84
Query: 276 ---ASIKKLKKDKAINATAKTSRLEA 298
A ++ K+ + IN + S ++A
Sbjct: 85 EVLAEFERRKRARQINVSTDDSEVKA 110
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 296 (109.3 bits), Expect = 8.7e-22, Sum P(2) = 8.7e-22
Identities = 76/288 (26%), Positives = 133/288 (46%)
Query: 354 LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRS 413
L +S + + G +D+ L + D+ + G + + ++ R D+ +GR
Sbjct: 369 LKVFELSTNSCQILHGHTDTILSI-DVFRKGSMFATCA-KDKSVRVWRMDV--SSGRVHC 424
Query: 414 YTLYQGHSGPVYSASFSPLGD-FILSSSADTTIRLWS---TKLNANLVCYKG------HN 463
GHS V S + S + F++S S D T+++W T ++ K H
Sbjct: 425 VAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHE 484
Query: 464 YPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATG 523
V V +P AS S DRTA++W++ ++ L + GH V V++ + +
Sbjct: 485 KDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSA 544
Query: 524 SSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVT 583
S+D +VR+W + C++ F GH + +L + G + S DG + +W + + CV
Sbjct: 545 SADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNECVR 604
Query: 584 PLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW-DVTTSTKVLKTEEK 630
L H VW L C L+ +GSAD T+ +W D T ++K+ +K
Sbjct: 605 TLDAHQDKVWALHGGCRDELMVTGSADSTITVWTDKLRKTVIIKSTKK 652
Score = 200 (75.5 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 70/258 (27%), Positives = 121/258 (46%)
Query: 400 PREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
P+ +I+ + K +++ Q + + + SP + ++S+S +R W K +
Sbjct: 42 PKINILQISTGKIIHSIEQEDQEDITAFALSPDDEMLVSASRALLLRQWDWKQQQCRRSW 101
Query: 460 KG-HNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH--IN 516
+ H+ PV + F+ A+ D T ++W + + + G V V +H I+
Sbjct: 102 RAVHSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDIS 161
Query: 517 CNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
+ + SSD +R+WD+ S CV + H S + +LA SPDG + S D +WDL
Sbjct: 162 RLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDL 221
Query: 577 ASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCT---VK---LWDVTTSTK-VLKTEE 629
+ + T V+ + EG +L SGSAD + VK L VT +K VL+ +
Sbjct: 222 QEQK-----VKRTIPVYE---AVEGVVLLSGSADYSEMGVKSDALHLVTAGSKGVLRVWD 273
Query: 630 KSGTNRLRSLKTLPTKST 647
S ++R +TLP S+
Sbjct: 274 SS-SSRCVFTQTLPDASS 290
Score = 171 (65.3 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 57/196 (29%), Positives = 95/196 (48%)
Query: 436 ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF-NPQGHYFASSSHDRTARIWSMDR 494
+++ +A+ I L+ T A + G+N V DV+F + A +++ +++ +
Sbjct: 317 LITVTAEHNILLYQTPTLAVQQQFVGYNDDVLDVKFVGKDDTHIAVATNSSQLKVFELST 376
Query: 495 IQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLW--DVSSGE--CVRIFIGHRSMI 550
+I+ GH + + + AT + DK+VR+W DVSSG CV GH + +
Sbjct: 377 -NSCQILHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAV 435
Query: 551 LSLAMSP-DGRYMASGDEDGTIMMWDL-----ASG----RCVTPLMGHTSCVWTLAYSCE 600
S+A S +++ SG +D T+ +WDL A G + + H V ++ S
Sbjct: 436 GSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPN 495
Query: 601 GSLLASGSADCTVKLW 616
LLASGS D T KLW
Sbjct: 496 DKLLASGSQDRTAKLW 511
Score = 63 (27.2 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 28/111 (25%), Positives = 47/111 (42%)
Query: 357 ASISQD--GSLVAGGFSDSSLKVWDMAKL-------GQQAVSSGLQGENDTTPREDIIGP 407
AS+S D +L+A G D ++K+WD+ K G V ++ D + R +
Sbjct: 110 ASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDIS-RLQLFSS 168
Query: 408 NG----------RKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLW 448
+ R + + H PV + +FSP G ++SS D +W
Sbjct: 169 SSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVW 219
Score = 40 (19.1 bits), Expect = 8.7e-22, Sum P(2) = 8.7e-22
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 351 HNGLNCASISQDG-SLVAGGFSDSSLKVWDM 380
++ + + S DG +LV+ G D VWD+
Sbjct: 192 YSPVTALAFSPDGHTLVSSG-RDKICSVWDL 221
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 263 (97.6 bits), Expect = 8.9e-22, P = 8.9e-22
Identities = 64/243 (26%), Positives = 114/243 (46%)
Query: 397 DTTPREDIIGPN--GR--KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
DTT + + G GR R+ +GH +Y+ +S ++S+S D + +W T
Sbjct: 27 DTTLAQIVSGVEVVGRIQMRTRRTLRGHLAKIYAMHWSTDSKLLVSASQDGKLIVWDTYT 86
Query: 453 NANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSDV 508
+ + V + P G++ A D I+++ ++ R ++ H +
Sbjct: 87 TNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYL 146
Query: 509 DCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDED 568
C R+ ++ N I T S D T LWD+ +G+ +F+GH +SLA+SPD + SG D
Sbjct: 147 SCCRF-LDDNSIVTSSGDTTCALWDIETGQQKTVFLGHTGDCMSLAVSPDFKLFISGACD 205
Query: 569 GTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTE 628
T +WD+ G C GH S + + + G + +GS D T +L+D+ +++
Sbjct: 206 ATAKLWDVREGTCRQTFSGHESDINAICFFPNGEAICTGSDDATCRLFDLRADQELIVYS 265
Query: 629 EKS 631
+S
Sbjct: 266 HES 268
Score = 239 (89.2 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 61/202 (30%), Positives = 100/202 (49%)
Query: 420 HSGPVYSASFSPLGD-FILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
H+G + F L D I++SS DTT LW + + GH + +P F
Sbjct: 142 HTGYLSCCRF--LDDNSIVTSSGDTTCALWDIETGQQKTVFLGHTGDCMSLAVSPDFKLF 199
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
S + D TA++W + + +GH SD++ + + N I TGS D T RL+D+ + +
Sbjct: 200 ISGACDATAKLWDVREGTCRQTFSGHESDINAICFFPNGEAICTGSDDATCRLFDLRADQ 259
Query: 539 CVRIFIGHRSMIL---SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTL 595
+ ++ H S+I S+A S GR + +G +D +WD V L GH + V L
Sbjct: 260 ELIVY-SHESIICGITSVAFSRSGRLLLAGYDDFNCNIWDSLKAERVGILSGHDNRVSCL 318
Query: 596 AYSCEGSLLASGSADCTVKLWD 617
+ +G +A+GS D +K+W+
Sbjct: 319 GVTADGMAVATGSWDSFLKIWN 340
Score = 204 (76.9 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 57/226 (25%), Positives = 108/226 (47%)
Query: 413 SYTLYQGHSGPVYSA-----SFSPLGDFILSSSADTTIRLWSTKLN-ANLVCYK---GHN 463
+YT + H+ P+ S+ +++P G+F+ D +++ K N+ + H
Sbjct: 84 TYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLKTREGNVKVSRELSAHT 143
Query: 464 YPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY--IA 521
+ +F +SS D T +W ++ Q + GH D C+ ++ ++
Sbjct: 144 GYLSCCRFLDDNS-IVTSSGDTTCALWDIETGQQKTVFLGHTGD--CMSLAVSPDFKLFI 200
Query: 522 TGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRC 581
+G+ D T +LWDV G C + F GH S I ++ P+G + +G +D T ++DL + +
Sbjct: 201 SGACDATAKLWDVREGTCRQTFSGHESDINAICFFPNGEAICTGSDDATCRLFDLRADQE 260
Query: 582 VTPLMGHTS--C-VWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
+ + H S C + ++A+S G LL +G D +WD + +V
Sbjct: 261 LI-VYSHESIICGITSVAFSRSGRLLLAGYDDFNCNIWDSLKAERV 305
Score = 144 (55.7 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 47/203 (23%), Positives = 90/203 (44%)
Query: 348 INTHNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT---TP--R 401
++ H G L+C D S+V D++ +WD+ Q+ V G G+ + +P +
Sbjct: 139 LSAHTGYLSCCRFLDDNSIVTSS-GDTTCALWDIETGQQKTVFLGHTGDCMSLAVSPDFK 197
Query: 402 EDIIGP-NGRKRSYTL--------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
I G + + + + + GH + + F P G+ I + S D T RL+ +
Sbjct: 198 LFISGACDATAKLWDVREGTCRQTFSGHESDINAICFFPNGEAICTGSDDATCRLFDLRA 257
Query: 453 NANLVCYKGHNY--PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDC 510
+ L+ Y + + V F+ G + D IW + + + I++GH + V C
Sbjct: 258 DQELIVYSHESIICGITSVAFSRSGRLLLAGYDDFNCNIWDSLKAERVGILSGHDNRVSC 317
Query: 511 VRWHINCNYIATGSSDKTVRLWD 533
+ + +ATGS D +++W+
Sbjct: 318 LGVTADGMAVATGSWDSFLKIWN 340
Score = 40 (19.1 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 360 SQDGSLVAGGFSDSSLKVWD 379
S D L+ D L VWD
Sbjct: 64 STDSKLLVSASQDGKLIVWD 83
>ZFIN|ZDB-GENE-040426-839 [details] [associations]
symbol:ciao1 "cytosolic iron-sulfur protein
assembly 1 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-839 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BX323451 EMBL:BC044534 EMBL:BC065658
EMBL:BC171538 EMBL:BC171540 IPI:IPI00496663 RefSeq:NP_956441.2
UniGene:Dr.83731 ProteinModelPortal:Q6P0D9 STRING:Q6P0D9
PRIDE:Q6P0D9 Ensembl:ENSDART00000082256 GeneID:795104
KEGG:dre:795104 InParanoid:Q6P0D9 NextBio:20932107 Bgee:Q6P0D9
Uniprot:Q6P0D9
Length = 330
Score = 262 (97.3 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 64/204 (31%), Positives = 100/204 (49%)
Query: 428 SFSPLGDFILSSSADTTIRLWSTKLNA---NLVCYKGHNYPVWDVQFNPQGHYFASSSHD 484
+++P G + + D IR+W + ++ V GH V V ++P G Y AS+S D
Sbjct: 23 AWNPAGTTLATCGGDRAIRIWGKEGDSWECKCVLSDGHQRTVRKVAWSPCGKYLASASFD 82
Query: 485 RTARIWSM--DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG---EC 539
T IW + + L ++ GH ++V CV W + + +AT S DK+V +W+V EC
Sbjct: 83 ATTCIWKKTDEDFECLTVLEGHENEVKCVAWAPSGSLLATCSRDKSVWIWEVDEEDEYEC 142
Query: 540 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG--RCVTPLMGHTSCVWTLAY 597
+ + H + + P +AS D I ++ C L GH S VW+L +
Sbjct: 143 LSVVNSHTQDVKHVVWHPTQELLASASYDNKICIYKEEDDDWECRATLEGHESTVWSLTF 202
Query: 598 SCEGSLLASGSADCTVKLWDVTTS 621
EG LAS S D TVK+W +T+
Sbjct: 203 DPEGRRLASCSDDRTVKIWKESTT 226
Score = 213 (80.0 bits), Expect = 8.9e-15, P = 8.9e-15
Identities = 51/167 (30%), Positives = 80/167 (47%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY---KGHNYPVWDVQFN 472
L GH V ++SP G ++ S+S D T +W K + + C +GH V V +
Sbjct: 56 LSDGHQRTVRKVAWSPCGKYLASASFDATTCIWK-KTDEDFECLTVLEGHENEVKCVAWA 114
Query: 473 PQGHYFASSSHDRTARIWSMDR---IQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
P G A+ S D++ IW +D + L ++ H DV V WH +A+ S D +
Sbjct: 115 PSGSLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQELLASASYDNKI 174
Query: 530 RLW--DVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
++ + EC GH S + SL P+GR +AS +D T+ +W
Sbjct: 175 CIYKEEDDDWECRATLEGHESTVWSLTFDPEGRRLASCSDDRTVKIW 221
Score = 162 (62.1 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 43/152 (28%), Positives = 71/152 (46%)
Query: 467 WDVQFNPQGHYFASSSHDRTARIWSM--DRIQPLRIMA-GHLSDVDCVRWHINCNYIATG 523
W V +NP G A+ DR RIW D + +++ GH V V W Y+A+
Sbjct: 20 WYVAWNPAGTTLATCGGDRAIRIWGKEGDSWECKCVLSDGHQRTVRKVAWSPCGKYLASA 79
Query: 524 SSDKTVRLWDVSSG--ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG-- 579
S D T +W + EC+ + GH + + +A +P G +A+ D ++ +W++
Sbjct: 80 SFDATTCIWKKTDEDFECLTVLEGHENEVKCVAWAPSGSLLATCSRDKSVWIWEVDEEDE 139
Query: 580 -RCVTPLMGHTSCVWTLAYSCEGSLLASGSAD 610
C++ + HT V + + LLAS S D
Sbjct: 140 YECLSVVNSHTQDVKHVVWHPTQELLASASYD 171
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 261 (96.9 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 70/246 (28%), Positives = 120/246 (48%)
Query: 396 NDTTPR---EDIIG-PN--GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWS 449
NDTT + D+ G P G+ + +GH +Y+ ++ ++S+S D + +W
Sbjct: 31 NDTTLKTFTRDLPGLPKMEGKIKVRRNLKGHLAKIYAMHWAEDNVHLVSASQDGKLLVWD 90
Query: 450 TKLNANLVCYKGHNYPV---WDVQ--FNPQGHYFASSSHDRTARIWSM-DRIQPLRI--- 500
L N V H P+ W + ++P ++ A D I+++ R QP+R+
Sbjct: 91 G-LTTNKV----HAIPLRSSWVMTCAYSPTANFVACGGLDNICSIYNLRSREQPIRVCRE 145
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
+ H + C R+ +N I T S D T LWDV +G + F H ++S+++SPD
Sbjct: 146 LNSHTGYLSCCRF-LNDRQIVTSSGDMTCILWDVENGTKITEFSDHNGDVMSVSVSPDKN 204
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 620
Y SG D T +WDL SG+CV GH + + + Y G +GS D + +L+D+
Sbjct: 205 YFISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYFPNGLSFGTGSDDASCRLFDIRA 264
Query: 621 STKVLK 626
++++
Sbjct: 265 DRELMQ 270
Score = 246 (91.7 bits), Expect = 7.9e-19, P = 7.9e-19
Identities = 60/200 (30%), Positives = 99/200 (49%)
Query: 420 HSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
H+G + F L D I++SS D T LW + + + HN V V +P +YF
Sbjct: 149 HTGYLSCCRF--LNDRQIVTSSGDMTCILWDVENGTKITEFSDHNGDVMSVSVSPDKNYF 206
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
S + D TA++W + + ++ GH +D++ V++ N TGS D + RL+D+ +
Sbjct: 207 ISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYFPNGLSFGTGSDDASCRLFDIRADR 266
Query: 539 CVRIFIGHRSM--ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+ + + I S+ S GR++ +G +D T +WD G V L GH + V L
Sbjct: 267 ELMQYTHDNILCGITSVGFSFSGRFLFAGYDDFTCNVWDTLKGERVLSLTGHGNRVSCLG 326
Query: 597 YSCEGSLLASGSADCTVKLW 616
+G L +GS D +K+W
Sbjct: 327 VPTDGMALCTGSWDSLLKIW 346
Score = 201 (75.8 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 54/211 (25%), Positives = 98/211 (46%)
Query: 424 VYSASFSPLGDFILSSSADTTIRLWSTKLNAN--LVCYK--GHNYPVWDVQFNPQGHYFA 479
V + ++SP +F+ D +++ + VC + H + +F
Sbjct: 107 VMTCAYSPTANFVACGGLDNICSIYNLRSREQPIRVCRELNSHTGYLSCCRFL-NDRQIV 165
Query: 480 SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGEC 539
+SS D T +W ++ + + H DV V + NY +G+ D T +LWD+ SG+C
Sbjct: 166 TSSGDMTCILWDVENGTKITEFSDHNGDVMSVSVSPDKNYFISGACDATAKLWDLRSGKC 225
Query: 540 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS----C-VWT 594
V+ F GH + I ++ P+G +G +D + ++D+ + R LM +T C + +
Sbjct: 226 VQTFTGHEADINAVQYFPNGLSFGTGSDDASCRLFDIRADR---ELMQYTHDNILCGITS 282
Query: 595 LAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
+ +S G L +G D T +WD +VL
Sbjct: 283 VGFSFSGRFLFAGYDDFTCNVWDTLKGERVL 313
Score = 129 (50.5 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 38/157 (24%), Positives = 71/157 (45%)
Query: 494 RIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSL 553
+I+ R + GHL+ + + W + ++ + S D + +WD + V S +++
Sbjct: 51 KIKVRRNLKGHLAKIYAMHWAEDNVHLVSASQDGKLLVWDGLTTNKVHAIPLRSSWVMTC 110
Query: 554 AMSPDGRYMASGDEDGTIMMWDLASG----RCVTPLMGHTSCVWTLAYSCEGSLLASGSA 609
A SP ++A G D +++L S R L HT + + + ++ S S
Sbjct: 111 AYSPTANFVACGGLDNICSIYNLRSREQPIRVCRELNSHTGYLSCCRFLNDRQIVTS-SG 169
Query: 610 DCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKS 646
D T LWDV TK+ + + +G + S+ P K+
Sbjct: 170 DMTCILWDVENGTKITEFSDHNGD--VMSVSVSPDKN 204
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 261 (96.9 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 63/238 (26%), Positives = 112/238 (47%)
Query: 394 GENDTTPREDIIGPNGR--KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTK 451
G++ T + P GR R+ +GH +Y+ + ++S+S D + +W +
Sbjct: 26 GDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSY 85
Query: 452 LNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSD 507
+ + V + P G++ A D I+S+ ++ R + GH
Sbjct: 86 TTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGY 145
Query: 508 VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDE 567
+ C R+ ++ N I T S D T LWD+ +G+ F GH ++SL+++PDGR SG
Sbjct: 146 LSCCRF-LDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGAC 204
Query: 568 DGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
D +I +WD+ C +GH S + +A+ G +GS D T +L+D+ ++L
Sbjct: 205 DASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL 262
Score = 244 (91.0 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 62/203 (30%), Positives = 101/203 (49%)
Query: 419 GHSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH+G + F L D I++SS DTT LW + V + GH+ V + P G
Sbjct: 141 GHTGYLSCCRF--LDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRT 198
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
F S + D + ++W + + GH SD++ V + N TGS D T RL+D+ +
Sbjct: 199 FVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRAD 258
Query: 538 ECVRIFIGHRSMIL---SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ + ++ H ++I S+A S GR + +G +D +WD G L GH + V
Sbjct: 259 QELLMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSC 317
Query: 595 LAYSCEGSLLASGSADCTVKLWD 617
L + +G +A+GS D +K+W+
Sbjct: 318 LGVTDDGMAVATGSWDSFLKIWN 340
Score = 135 (52.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 43/168 (25%), Positives = 73/168 (43%)
Query: 486 TARIWSMDRIQ--PLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIF 543
TA + + RIQ R + GHL+ + + W + + + S D + +WD + V
Sbjct: 34 TAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI 93
Query: 544 IGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS--G--RCVTPLMGHTSCVWTLAYSC 599
S +++ A +P G ++A G D ++ L + G R L GHT + +
Sbjct: 94 PLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD 153
Query: 600 EGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKST 647
+ ++ S S D T LWD+ T + + SG + SL P T
Sbjct: 154 DNQIITS-SGDTTCALWDIETGQQTVGFAGHSGD--VMSLSLAPDGRT 198
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 261 (96.9 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 63/238 (26%), Positives = 112/238 (47%)
Query: 394 GENDTTPREDIIGPNGR--KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTK 451
G++ T + P GR R+ +GH +Y+ + ++S+S D + +W +
Sbjct: 26 GDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSY 85
Query: 452 LNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSD 507
+ + V + P G++ A D I+S+ ++ R + GH
Sbjct: 86 TTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGY 145
Query: 508 VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDE 567
+ C R+ ++ N I T S D T LWD+ +G+ F GH ++SL+++PDGR SG
Sbjct: 146 LSCCRF-LDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGAC 204
Query: 568 DGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
D +I +WD+ C +GH S + +A+ G +GS D T +L+D+ ++L
Sbjct: 205 DASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL 262
Score = 244 (91.0 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 62/203 (30%), Positives = 101/203 (49%)
Query: 419 GHSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH+G + F L D I++SS DTT LW + V + GH+ V + P G
Sbjct: 141 GHTGYLSCCRF--LDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRT 198
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
F S + D + ++W + + GH SD++ V + N TGS D T RL+D+ +
Sbjct: 199 FVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRAD 258
Query: 538 ECVRIFIGHRSMIL---SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ + ++ H ++I S+A S GR + +G +D +WD G L GH + V
Sbjct: 259 QELLMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSC 317
Query: 595 LAYSCEGSLLASGSADCTVKLWD 617
L + +G +A+GS D +K+W+
Sbjct: 318 LGVTDDGMAVATGSWDSFLKIWN 340
Score = 135 (52.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 43/168 (25%), Positives = 73/168 (43%)
Query: 486 TARIWSMDRIQ--PLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIF 543
TA + + RIQ R + GHL+ + + W + + + S D + +WD + V
Sbjct: 34 TAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI 93
Query: 544 IGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS--G--RCVTPLMGHTSCVWTLAYSC 599
S +++ A +P G ++A G D ++ L + G R L GHT + +
Sbjct: 94 PLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD 153
Query: 600 EGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKST 647
+ ++ S S D T LWD+ T + + SG + SL P T
Sbjct: 154 DNQIITS-SGDTTCALWDIETGQQTVGFAGHSGD--VMSLSLAPDGRT 198
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 261 (96.9 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 63/238 (26%), Positives = 112/238 (47%)
Query: 394 GENDTTPREDIIGPNGR--KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTK 451
G++ T + P GR R+ +GH +Y+ + ++S+S D + +W +
Sbjct: 26 GDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSY 85
Query: 452 LNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSD 507
+ + V + P G++ A D I+S+ ++ R + GH
Sbjct: 86 TTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGY 145
Query: 508 VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDE 567
+ C R+ ++ N I T S D T LWD+ +G+ F GH ++SL+++PDGR SG
Sbjct: 146 LSCCRF-LDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGAC 204
Query: 568 DGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
D +I +WD+ C +GH S + +A+ G +GS D T +L+D+ ++L
Sbjct: 205 DASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL 262
Score = 244 (91.0 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 62/203 (30%), Positives = 101/203 (49%)
Query: 419 GHSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH+G + F L D I++SS DTT LW + V + GH+ V + P G
Sbjct: 141 GHTGYLSCCRF--LDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRT 198
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
F S + D + ++W + + GH SD++ V + N TGS D T RL+D+ +
Sbjct: 199 FVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRAD 258
Query: 538 ECVRIFIGHRSMIL---SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ + ++ H ++I S+A S GR + +G +D +WD G L GH + V
Sbjct: 259 QELLMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSC 317
Query: 595 LAYSCEGSLLASGSADCTVKLWD 617
L + +G +A+GS D +K+W+
Sbjct: 318 LGVTDDGMAVATGSWDSFLKIWN 340
Score = 135 (52.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 43/168 (25%), Positives = 73/168 (43%)
Query: 486 TARIWSMDRIQ--PLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIF 543
TA + + RIQ R + GHL+ + + W + + + S D + +WD + V
Sbjct: 34 TAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI 93
Query: 544 IGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS--G--RCVTPLMGHTSCVWTLAYSC 599
S +++ A +P G ++A G D ++ L + G R L GHT + +
Sbjct: 94 PLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD 153
Query: 600 EGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKST 647
+ ++ S S D T LWD+ T + + SG + SL P T
Sbjct: 154 DNQIITS-SGDTTCALWDIETGQQTVGFAGHSGD--VMSLSLAPDGRT 198
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 261 (96.9 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 63/238 (26%), Positives = 112/238 (47%)
Query: 394 GENDTTPREDIIGPNGR--KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTK 451
G++ T + P GR R+ +GH +Y+ + ++S+S D + +W +
Sbjct: 26 GDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSY 85
Query: 452 LNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSD 507
+ + V + P G++ A D I+S+ ++ R + GH
Sbjct: 86 TTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGY 145
Query: 508 VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDE 567
+ C R+ ++ N I T S D T LWD+ +G+ F GH ++SL+++PDGR SG
Sbjct: 146 LSCCRF-LDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGAC 204
Query: 568 DGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
D +I +WD+ C +GH S + +A+ G +GS D T +L+D+ ++L
Sbjct: 205 DASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL 262
Score = 244 (91.0 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 62/203 (30%), Positives = 101/203 (49%)
Query: 419 GHSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH+G + F L D I++SS DTT LW + V + GH+ V + P G
Sbjct: 141 GHTGYLSCCRF--LDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRT 198
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
F S + D + ++W + + GH SD++ V + N TGS D T RL+D+ +
Sbjct: 199 FVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRAD 258
Query: 538 ECVRIFIGHRSMIL---SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ + ++ H ++I S+A S GR + +G +D +WD G L GH + V
Sbjct: 259 QELLMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSC 317
Query: 595 LAYSCEGSLLASGSADCTVKLWD 617
L + +G +A+GS D +K+W+
Sbjct: 318 LGVTDDGMAVATGSWDSFLKIWN 340
Score = 135 (52.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 43/168 (25%), Positives = 73/168 (43%)
Query: 486 TARIWSMDRIQ--PLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIF 543
TA + + RIQ R + GHL+ + + W + + + S D + +WD + V
Sbjct: 34 TAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI 93
Query: 544 IGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS--G--RCVTPLMGHTSCVWTLAYSC 599
S +++ A +P G ++A G D ++ L + G R L GHT + +
Sbjct: 94 PLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD 153
Query: 600 EGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKST 647
+ ++ S S D T LWD+ T + + SG + SL P T
Sbjct: 154 DNQIITS-SGDTTCALWDIETGQQTVGFAGHSGD--VMSLSLAPDGRT 198
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 261 (96.9 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 63/238 (26%), Positives = 112/238 (47%)
Query: 394 GENDTTPREDIIGPNGR--KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTK 451
G++ T + P GR R+ +GH +Y+ + ++S+S D + +W +
Sbjct: 26 GDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSY 85
Query: 452 LNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSD 507
+ + V + P G++ A D I+S+ ++ R + GH
Sbjct: 86 TTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGY 145
Query: 508 VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDE 567
+ C R+ ++ N I T S D T LWD+ +G+ F GH ++SL+++PDGR SG
Sbjct: 146 LSCCRF-LDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGAC 204
Query: 568 DGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
D +I +WD+ C +GH S + +A+ G +GS D T +L+D+ ++L
Sbjct: 205 DASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL 262
Score = 244 (91.0 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 62/203 (30%), Positives = 101/203 (49%)
Query: 419 GHSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH+G + F L D I++SS DTT LW + V + GH+ V + P G
Sbjct: 141 GHTGYLSCCRF--LDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRT 198
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
F S + D + ++W + + GH SD++ V + N TGS D T RL+D+ +
Sbjct: 199 FVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRAD 258
Query: 538 ECVRIFIGHRSMIL---SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ + ++ H ++I S+A S GR + +G +D +WD G L GH + V
Sbjct: 259 QELLMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSC 317
Query: 595 LAYSCEGSLLASGSADCTVKLWD 617
L + +G +A+GS D +K+W+
Sbjct: 318 LGVTDDGMAVATGSWDSFLKIWN 340
Score = 135 (52.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 43/168 (25%), Positives = 73/168 (43%)
Query: 486 TARIWSMDRIQ--PLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIF 543
TA + + RIQ R + GHL+ + + W + + + S D + +WD + V
Sbjct: 34 TAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI 93
Query: 544 IGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS--G--RCVTPLMGHTSCVWTLAYSC 599
S +++ A +P G ++A G D ++ L + G R L GHT + +
Sbjct: 94 PLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD 153
Query: 600 EGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKST 647
+ ++ S S D T LWD+ T + + SG + SL P T
Sbjct: 154 DNQIITS-SGDTTCALWDIETGQQTVGFAGHSGD--VMSLSLAPDGRT 198
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 284 (105.0 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 68/234 (29%), Positives = 115/234 (49%)
Query: 408 NGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVW 467
NG S TL Q H GP+++ ++ G++ILS+ D T +W + H+ P
Sbjct: 261 NGNLAS-TLGQ-HKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPAL 318
Query: 468 DVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDK 527
DV + FAS S D + + +P++ GH ++V+ ++W + +A+ S D
Sbjct: 319 DVDWQ-NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDM 377
Query: 528 TVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR---------YMASGDEDGTIMMWDLAS 578
T+++W + CV HR I ++ SP G +AS D T+ +WD+
Sbjct: 378 TLKIWSMKQDACVHNLQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDMEQ 437
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
G C L H V+++A+S +G LASGS D V +W+ T S ++ + + +G
Sbjct: 438 GVCTHTLRKHQEPVYSVAFSPDGKYLASGSFDKCVHIWN-TQSGSLVHSYQGTG 490
Score = 259 (96.2 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 84/291 (28%), Positives = 134/291 (46%)
Query: 385 QQAVSSGLQG-ENDTTPRE---DI-IGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSS 439
Q+A+ +G N + P E D+ I PN T+ +GH V+ +++P+ D + S
Sbjct: 138 QEAIVNGAHAINNHSKPMEIDGDVEIPPN----KATVLRGHESEVFICAWNPVSDLLASG 193
Query: 440 SADTTIRLWSTKLNAN-----LV---CYK--GHNYP----VWDVQFNPQGHYFASSSHDR 485
S D+T R+W+ N + LV C + GH+ P V + +N G A+ S+D
Sbjct: 194 SGDSTARIWNLNENGSRASTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDG 253
Query: 486 TARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIG 545
ARIW+ + + H + ++W+ NYI + DKT +WD +GE + F
Sbjct: 254 FARIWT-ENGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPF 312
Query: 546 HRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLA 605
H + L + + + AS D I + L R V GHT+ V + + G LLA
Sbjct: 313 HSAPALDVDWQNNTTF-ASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLA 371
Query: 606 SGSADCTVKLWDVTTSTKV--LKTEEKSGTNRLRSLKTLPTKSTPVYSLQV 654
S S D T+K+W + V L+ K ++ T PT S P S+ +
Sbjct: 372 SCSDDMTLKIWSMKQDACVHNLQAHRKE-IYTIKWSPTGPTTSNPNSSIML 421
Score = 245 (91.3 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 59/208 (28%), Positives = 101/208 (48%)
Query: 420 HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFA 479
HS P + F S S D I + + + ++GH V ++++P G A
Sbjct: 313 HSAPALDVDWQNNTTFA-SCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLA 371
Query: 480 SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH------INCN---YIATGSSDKTVR 530
S S D T +IWSM + + + H ++ ++W N N +A+ S D TVR
Sbjct: 372 SCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVR 431
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
LWD+ G C H+ + S+A SPDG+Y+ASG D + +W+ SG V G T
Sbjct: 432 LWDMEQGVCTHTLRKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYQG-TG 490
Query: 591 CVWTLAYSCEGSLLASGSADCTVKLWDV 618
++ + ++ +G + + ++D +V + D+
Sbjct: 491 GIFEVCWNAQGDKVGASASDGSVCVLDL 518
Score = 224 (83.9 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 67/246 (27%), Positives = 111/246 (45%)
Query: 394 GENDTTPREDIIGPNGRKRSYTLYQ-------GHSGP----VYSASFSPLGDFILSSSAD 442
G D+T R + NG + S L GH P V S ++ G + + S D
Sbjct: 193 GSGDSTARIWNLNENGSRASTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYD 252
Query: 443 TTIRLWSTKLNANLVCYKG-HNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIM 501
R+W+ N NL G H P++ +++N +G+Y S+ D+T IW + +
Sbjct: 253 GFARIWTE--NGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQF 310
Query: 502 AGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRY 561
H + V W N + A+ S+D + + + V+ F GH + + ++ P G
Sbjct: 311 PFHSAPALDVDWQNNTTF-ASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGML 369
Query: 562 MASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS---------LLASGSADCT 612
+AS +D T+ +W + CV L H ++T+ +S G +LAS S D T
Sbjct: 370 LASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDST 429
Query: 613 VKLWDV 618
V+LWD+
Sbjct: 430 VRLWDM 435
Score = 39 (18.8 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 7 VEF-VATYLKKKGFSEAENALQAEIQRNKSSNNTN 40
V F V YL++ GFS + A I+ + S +N N
Sbjct: 8 VNFLVYRYLQESGFSHS--AFTFGIESHISQSNIN 40
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 260 (96.6 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 51/145 (35%), Positives = 80/145 (55%)
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDV 534
G A+ D +WS+++ + + GH S V+ VR + I GS ++R+WD+
Sbjct: 37 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 96
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ + +R +GH++ I SL P G ++ASG +D I +WD+ CV GH+ V
Sbjct: 97 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 156
Query: 595 LAYSCEGSLLASGSADCTVKLWDVT 619
L +S +G LAS + D TVKLWD+T
Sbjct: 157 LRFSPDGKWLASAADDHTVKLWDLT 181
Score = 259 (96.2 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 47/160 (29%), Positives = 83/160 (51%)
Query: 433 GDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSM 492
G + + D + LWS ++ GH PV V+ N + S + R+W +
Sbjct: 37 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 96
Query: 493 DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILS 552
+ + LR + GH +++ + +H ++A+GS D ++LWD+ CV + GH +
Sbjct: 97 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 156
Query: 553 LAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCV 592
L SPDG+++AS +D T+ +WDL +G+ ++ GHT V
Sbjct: 157 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV 196
Score = 191 (72.3 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 39/140 (27%), Positives = 71/140 (50%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH+ PV S + + I++ S +IR+W + L GH + + F+P G +
Sbjct: 65 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 124
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
AS S D ++W + R + GH V C+R+ + ++A+ + D TV+LWD+++G+
Sbjct: 125 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 184
Query: 539 CVRIFIGHRSMILSLAMSPD 558
+ F GH + + P+
Sbjct: 185 MMSEFPGHTGPVNVVEFHPN 204
Score = 189 (71.6 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 47/168 (27%), Positives = 79/168 (47%)
Query: 363 GSLVAGGFSDSSLKVWDMAK----LGQQAVSSGLQGENDTTPREDIIG--PNGRKRSYTL 416
G L+A G D + +W + K + +S ++ TP E I+ +G R + L
Sbjct: 37 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 96
Query: 417 --------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
GH + S F P G+F+ S S DT I+LW + + Y+GH+ V
Sbjct: 97 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 156
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN 516
++F+P G + AS++ D T ++W + + + GH V+ V +H N
Sbjct: 157 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN 204
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 260 (96.6 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 65/231 (28%), Positives = 109/231 (47%)
Query: 396 NDTTPRE--DIIGPNGR--KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTK 451
NDTT + P GR R+ +GH +Y+ ++ ++S+S D + +W +
Sbjct: 26 NDTTLATVASNLEPIGRIQMRTRRTLRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSY 85
Query: 452 LNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSD 507
+ + V + P G + A D I+S+ ++ R + GH
Sbjct: 86 TTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGY 145
Query: 508 VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDE 567
+ C R+ ++ N I T S D T LWD+ +G+ F GH ++SL++SPD R SG
Sbjct: 146 LSCCRF-LDDNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGAC 204
Query: 568 DGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
D + +WD+ G C GH S + +A+ G+ A+GS D T +L+D+
Sbjct: 205 DASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNAFATGSDDATCRLFDI 255
Score = 228 (85.3 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 59/203 (29%), Positives = 99/203 (48%)
Query: 419 GHSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH+G + F L D I++SS D T LW + + GH V + +P
Sbjct: 141 GHTGYLSCCRF--LDDNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDFRT 198
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
F S + D +A++W + + GH SD++ V + + N ATGS D T RL+D+ +
Sbjct: 199 FISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNAFATGSDDATCRLFDIRAD 258
Query: 538 ECVRIFIGHRSMIL---SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ + ++ H ++I S+A S GR + +G +D +WD L GH + V
Sbjct: 259 QELAMY-SHDNIICGITSVAFSKSGRLLFAGYDDFNCNVWDSMRQERAGVLAGHDNRVSC 317
Query: 595 LAYSCEGSLLASGSADCTVKLWD 617
L + +G + +GS D +K+W+
Sbjct: 318 LGVTEDGMAVCTGSWDSFLKIWN 340
Score = 173 (66.0 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 45/166 (27%), Positives = 75/166 (45%)
Query: 415 TLYQGHSGPVYSASFSPLGDF--ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFN 472
T + GH+G V S S SP DF +S + D + +LW + + GH + V F
Sbjct: 178 TAFTGHTGDVMSLSLSP--DFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFF 235
Query: 473 PQGHYFASSSHDRTARIWSMDRIQPLRIMAGH---LSDVDCVRWHINCNYIATGSSDKTV 529
P G+ FA+ S D T R++ + Q L M H + + V + + + G D
Sbjct: 236 PSGNAFATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSKSGRLLFAGYDDFNC 294
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWD 575
+WD E + GH + + L ++ DG + +G D + +W+
Sbjct: 295 NVWDSMRQERAGVLAGHDNRVSCLGVTEDGMAVCTGSWDSFLKIWN 340
Score = 122 (48.0 bits), Expect = 0.00022, P = 0.00022
Identities = 37/149 (24%), Positives = 64/149 (42%)
Query: 499 RIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPD 558
R + GHL+ + + W + + + S D + +WD + V S +++ A +P
Sbjct: 49 RTLRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 559 GRYMASGDEDGTIMMWDLAS--G--RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVK 614
G ++A G D ++ L + G R L GHT + + + ++ S S D T
Sbjct: 109 GSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTS-SGDMTCA 167
Query: 615 LWDVTTSTKVLKTEEKSGTNRLRSLKTLP 643
LWD+ T + T T + SL P
Sbjct: 168 LWDIETGQQC--TAFTGHTGDVMSLSLSP 194
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 279 (103.3 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 63/200 (31%), Positives = 95/200 (47%)
Query: 420 HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFA 479
H G +S L ++S S D T+ LWS + + + H V V F+P GH+ A
Sbjct: 255 HPGAFTQNDYSSLN--VVSCSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLA 312
Query: 480 SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGEC 539
++ D T R++ + + L GH V V +H + + TG D R+WD+ +G C
Sbjct: 313 TACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRC 372
Query: 540 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSC 599
+ GH I S+ P+G M +G D ++ +WDL R + HTS V +
Sbjct: 373 IMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRADA 432
Query: 600 EGSLLASGSADCTVKLWDVT 619
G L S S DCT+K+W T
Sbjct: 433 AGQYLVSASFDCTLKMWSTT 452
Score = 256 (95.2 bits), Expect = 7.5e-19, P = 7.5e-19
Identities = 54/197 (27%), Positives = 92/197 (46%)
Query: 420 HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFA 479
H V +F P G + ++ D+T R++ L+ +GH+ V DV F+P G
Sbjct: 295 HPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVAL 354
Query: 480 SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGEC 539
+ HD R+W M + + + GH ++ V W N + TGSSD ++++WD+
Sbjct: 355 TGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRN 414
Query: 540 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSC 599
H S++ + G+Y+ S D T+ MW + + L GH + + + S
Sbjct: 415 TYTMPAHTSVVTRVRADAAGQYLVSASFDCTLKMWSTTGWQPLRQLQGHDTRILCVDISP 474
Query: 600 EGSLLASGSADCTVKLW 616
+G + S + D T KLW
Sbjct: 475 DGQWMCSSAFDRTFKLW 491
Score = 236 (88.1 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 55/204 (26%), Positives = 104/204 (50%)
Query: 423 PVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNP----QGHYF 478
PV FS + I+++ ++ +W + A + + GH+ +F+P Q Y
Sbjct: 206 PVAFCEFSADSEHIVTAGWSGSVAVWKREQCAQEIKFIGHSSQAGCARFHPGAFTQNDYS 265
Query: 479 A----SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDV 534
+ S S+D T +WS+ + P+ + H V V +H N +++AT D T R++D+
Sbjct: 266 SLNVVSCSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMYDL 325
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
++ + + GH + +A PDG +G D +WD+ +GRC+ L GHT + +
Sbjct: 326 TTKKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHS 385
Query: 595 LAYSCEGSLLASGSADCTVKLWDV 618
+ + G + +GS+D ++K+WD+
Sbjct: 386 VEWMPNGYEMITGSSDNSMKVWDL 409
Score = 221 (82.9 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 61/231 (26%), Positives = 105/231 (45%)
Query: 349 NTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQA--VSSGLQGENDTTPREDIIG 406
N ++ LN S S DG+++ S S + ++ + Q+ V+ G + T D
Sbjct: 262 NDYSSLNVVSCSYDGTVLLWSLSQES-PIGELEQHPQRVSKVAFHPNGHHLATACFDSTW 320
Query: 407 P--NGRKRSYTLYQ-GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHN 463
+ + LYQ GHS V +F P G L+ D R+W + ++ GH
Sbjct: 321 RMYDLTTKKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHT 380
Query: 464 YPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATG 523
+ V++ P G+ + S D + ++W + + M H S V VR Y+ +
Sbjct: 381 KEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRADAAGQYLVSA 440
Query: 524 SSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
S D T+++W + + +R GH + IL + +SPDG++M S D T +W
Sbjct: 441 SFDCTLKMWSTTGWQPLRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLW 491
Score = 170 (64.9 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 46/205 (22%), Positives = 93/205 (45%)
Query: 448 WSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRI-QPLRIMAGHLS 506
W ++N + PV +F+ + ++ + +W ++ Q ++ + GH S
Sbjct: 190 WVQQINLH-ASQVADTRPVAFCEFSADSEHIVTAGWSGSVAVWKREQCAQEIKFI-GHSS 247
Query: 507 DVDCVRWHINC----NY----IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPD 558
C R+H +Y + + S D TV LW +S + H + +A P+
Sbjct: 248 QAGCARFHPGAFTQNDYSSLNVVSCSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPN 307
Query: 559 GRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
G ++A+ D T M+DL + + + GH+ V +A+ +GS+ +G DC ++WD+
Sbjct: 308 GHHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDM 367
Query: 619 TTSTKVLKTEEKSGTNRLRSLKTLP 643
T ++ + T + S++ +P
Sbjct: 368 RTGRCIMFLD--GHTKEIHSVEWMP 390
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 25/82 (30%), Positives = 45/82 (54%)
Query: 410 RKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
R+ +YT+ H+ V G +++S+S D T+++WST L +GH+ + V
Sbjct: 412 RRNTYTM-PAHTSVVTRVRADAAGQYLVSASFDCTLKMWSTTGWQPLRQLQGHDTRILCV 470
Query: 470 QFNPQGHYFASSSHDRTARIWS 491
+P G + SS+ DRT ++W+
Sbjct: 471 DISPDGQWMCSSAFDRTFKLWA 492
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 259 (96.2 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 66/211 (31%), Positives = 100/211 (47%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWST----KLNANLVCYKGHNYPVWDVQFNPQ 474
GH G V+ A + P + + D TIR+W+ + V GH + DV ++P
Sbjct: 12 GHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHTRTIRDVAWSPC 71
Query: 475 GHYFASSSHDRTARIWSM--DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLW 532
G + AS+S D T IW + + GH ++V V W + +AT S DK+V +W
Sbjct: 72 GRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGALLATCSRDKSVWIW 131
Query: 533 DVSSG---ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW--DLASG--RCVTPL 585
+V+ EC + H + + P+ +AS D TI ++ DLA L
Sbjct: 132 EVAQEDEYECAAVLNTHSQDVKKVEWHPNEDVLASASYDNTIQLYREDLADSDWSSFDTL 191
Query: 586 MGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
H S VW++A+ GS LAS S D TV++W
Sbjct: 192 ASHDSTVWSIAFDASGSRLASCSDDQTVRIW 222
Score = 206 (77.6 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 51/170 (30%), Positives = 83/170 (48%)
Query: 456 LVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMD---RIQPLRIMA-GHLSDVDCV 511
L C GH VW ++P+ A+ D+T RIW+ D R P +++ GH + V
Sbjct: 7 LQCLSGHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHTRTIRDV 66
Query: 512 RWHINCNYIATGSSDKTVRLWDVSSGE--CVRIFIGHRSMILSLAMSPDGRYMASGDEDG 569
W ++A+ S D TV +WD SGE C GH + + S++ S G +A+ D
Sbjct: 67 AWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGALLATCSRDK 126
Query: 570 TIMMWDLASG---RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
++ +W++A C L H+ V + + +LAS S D T++L+
Sbjct: 127 SVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPNEDVLASASYDNTIQLY 176
Score = 198 (74.8 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 48/133 (36%), Positives = 73/133 (54%)
Query: 492 MDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLW-DVSSGECVRIFI---GHR 547
M ++ L+ ++GH V WH +AT DKT+R+W D +G V + GH
Sbjct: 1 MGKLTLLQCLSGHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHT 60
Query: 548 SMILSLAMSPDGRYMASGDEDGTIMMWDLASGR--CVTPLMGHTSCVWTLAYSCEGSLLA 605
I +A SP GR++AS D T+ +WD SG C L GH + V ++++S G+LLA
Sbjct: 61 RTIRDVAWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGALLA 120
Query: 606 SGSADCTVKLWDV 618
+ S D +V +W+V
Sbjct: 121 TCSRDKSVWIWEV 133
Score = 198 (74.8 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 47/169 (27%), Positives = 82/169 (48%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVC---YKGHNYPVWDVQFN 472
L GH+ + ++SP G F+ S+S D T+ +W + + C +GH V V ++
Sbjct: 55 LSDGHTRTIRDVAWSPCGRFLASASFDATVAIWDRR-SGEFECNATLEGHENEVKSVSWS 113
Query: 473 PQGHYFASSSHDRTARIWSM---DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
G A+ S D++ IW + D + ++ H DV V WH N + +A+ S D T+
Sbjct: 114 KSGALLATCSRDKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPNEDVLASASYDNTI 173
Query: 530 RLW--DVSSGECVRI--FIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
+L+ D++ + H S + S+A G +AS +D T+ +W
Sbjct: 174 QLYREDLADSDWSSFDTLASHDSTVWSIAFDASGSRLASCSDDQTVRIW 222
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 282 (104.3 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 65/220 (29%), Positives = 107/220 (48%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQ 474
TL Q H GP+++ ++ G+FILS+ D T +W + H+ P DV +
Sbjct: 257 TLGQ-HKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-S 314
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDV 534
+ FAS S D + + + +P++ GH ++V+ ++W N +A+ S D T++LW +
Sbjct: 315 NNTFASCSTDMCIHVCKLGQERPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSM 374
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGR---------YMA-SGDEDGTIMMWDLASGRCVTP 584
CV H I ++ SP G +A S D T+ +WD G C+
Sbjct: 375 KQDTCVHDLQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLWDAERGACIHT 434
Query: 585 LMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
L H V+++A+S +G LASGS D V +W+ + V
Sbjct: 435 LTKHQEPVYSVAFSPDGRHLASGSFDKCVHIWNTQSGALV 474
Score = 245 (91.3 bits), Expect = 4.9e-17, Sum P(2) = 4.9e-17
Identities = 70/241 (29%), Positives = 114/241 (47%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLW-----STKLNANLV---CYK--GHNYP-- 465
+GH V+ +++P+ D + S S D+T R+W ST + LV C + G + P
Sbjct: 162 RGHESEVFICAWNPVSDLLASGSGDSTARIWNLSESSTGGSTQLVLRHCIREGGQDVPSN 221
Query: 466 --VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATG 523
V + +N +G A+ S+D ARIW+ D + H + ++W+ N+I +
Sbjct: 222 KDVTSLDWNSEGTLLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKKGNFILSA 280
Query: 524 SSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVT 583
DKT +WD +GE + F H + L + + + AS D I + L R +
Sbjct: 281 GVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQERPIK 339
Query: 584 PLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLP 643
GHT+ V + + G+LLAS S D T+KLW + T V + S + ++K P
Sbjct: 340 TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDLQAHS--KEIYTIKWSP 397
Query: 644 T 644
T
Sbjct: 398 T 398
Score = 243 (90.6 bits), Expect = 8.3e-17, Sum P(2) = 8.3e-17
Identities = 57/209 (27%), Positives = 100/209 (47%)
Query: 420 HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFA 479
HS P + F S S D I + + ++GH V ++++P G+ A
Sbjct: 303 HSAPALDVDWQSNNTFA-SCSTDMCIHVCKLGQERPIKTFQGHTNEVNAIKWDPTGNLLA 361
Query: 480 SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW--------HINCNYIATGSS--DKTV 529
S S D T ++WSM + + + H ++ ++W + N N + S+ D TV
Sbjct: 362 SCSDDMTLKLWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTV 421
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
RLWD G C+ H+ + S+A SPDGR++ASG D + +W+ SG V G T
Sbjct: 422 RLWDAERGACIHTLTKHQEPVYSVAFSPDGRHLASGSFDKCVHIWNTQSGALVNSYRG-T 480
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLWDV 618
++ + ++ G + + ++D +V + D+
Sbjct: 481 GGIFEVCWNSTGDKVGASASDGSVCVLDL 509
Score = 211 (79.3 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 68/264 (25%), Positives = 121/264 (45%)
Query: 365 LVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPV 424
L+A G DS+ ++W++++ S+G G R I R+ + V
Sbjct: 179 LLASGSGDSTARIWNLSES-----STG--GSTQLVLRHCI-----REGGQDVPSNKD--V 224
Query: 425 YSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKG-HNYPVWDVQFNPQGHYFASSSH 483
S ++ G + + S D R+W TK + NL G H P++ +++N +G++ S+
Sbjct: 225 TSLDWNSEGTLLATGSYDGFARIW-TK-DGNLASTLGQHKGPIFALKWNKKGNFILSAGV 282
Query: 484 DRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIF 543
D+T IW + + H + V W N N A+ S+D + + + ++ F
Sbjct: 283 DKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSN-NTFASCSTDMCIHVCKLGQERPIKTF 341
Query: 544 IGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS- 602
GH + + ++ P G +AS +D T+ +W + CV L H+ ++T+ +S G
Sbjct: 342 QGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDLQAHSKEIYTIKWSPTGPG 401
Query: 603 --------LLA-SGSADCTVKLWD 617
+LA S S D TV+LWD
Sbjct: 402 TNNPNANLMLARSASFDSTVRLWD 425
Score = 191 (72.3 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 47/178 (26%), Positives = 87/178 (48%)
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
G++R +QGH+ V + + P G+ + S S D T++LWS K + + + H+ ++
Sbjct: 333 GQERPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDLQAHSKEIYT 392
Query: 469 VQFNPQGH---------YFA-SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCN 518
++++P G A S+S D T R+W +R + + H V V + +
Sbjct: 393 IKWSPTGPGTNNPNANLMLARSASFDSTVRLWDAERGACIHTLTKHQEPVYSVAFSPDGR 452
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
++A+GS DK V +W+ SG V + G I + + G + + DG++ + DL
Sbjct: 453 HLASGSFDKCVHIWNTQSGALVNSYRGTGG-IFEVCWNSTGDKVGASASDGSVCVLDL 509
Score = 133 (51.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 34/135 (25%), Positives = 63/135 (46%)
Query: 500 IMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVS---SGECVRIFIGH---------- 546
++ GH S+V W+ + +A+GS D T R+W++S +G ++ + H
Sbjct: 160 VLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSESSTGGSTQLVLRHCIREGGQDVP 219
Query: 547 -RSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLA 605
+ SL + +G +A+G DG +W G + L H ++ L ++ +G+ +
Sbjct: 220 SNKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFIL 278
Query: 606 SGSADCTVKLWDVTT 620
S D T +WD T
Sbjct: 279 SAGVDKTTIIWDAHT 293
Score = 39 (18.8 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 7 VEF-VATYLKKKGFSEAENALQAEIQRNKSSNNTN 40
V F V YL++ GFS + A I+ + S +N N
Sbjct: 8 VNFLVYRYLQESGFSHS--AFTFGIESHISQSNIN 40
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 258 (95.9 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 57/207 (27%), Positives = 101/207 (48%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH V S SP G+ + SSS D IRLW + + W V F+P +
Sbjct: 61 EGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQH 120
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
A+ SH I+ ++ + + + + + + Y+A+G+ D + ++D+++G
Sbjct: 121 LATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG 180
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY 597
+ + GH I SL SPD + + + +DG I ++++ L GH S V +A+
Sbjct: 181 KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAF 240
Query: 598 SCEGSLLASGSADCTVKLWDVTTSTKV 624
S + + S S+D +VK+WDV+ T V
Sbjct: 241 SPDDTHFVSSSSDKSVKVWDVSARTCV 267
Score = 240 (89.5 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 60/189 (31%), Positives = 102/189 (53%)
Query: 434 DFILSSSADTTIRLWS---TKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIW 490
+ ++S S D +++W +L +GH V V +P G+ ASSS D R+W
Sbjct: 33 ELVISGSLDDLVKVWKWSDERLELQSTL-EGHQLGVVSVDVSPSGNIMASSSLDAHIRLW 91
Query: 491 SMDRIQPLR-IMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSM 549
++ + +R I AG + D V + + ++ATGS V ++ V +G+
Sbjct: 92 DLESGKQIRAIDAGPV-DAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKF 150
Query: 550 ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSA 609
ILS+A SPDG+Y+ASG DG I ++D+A+G+ + L GH + +L +S + LL + S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 610 DCTVKLWDV 618
D +K+++V
Sbjct: 211 DGYIKIYEV 219
Score = 220 (82.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 63/269 (23%), Positives = 118/269 (43%)
Query: 365 LVAGGFSDSSLKVWDMA--KLGQQAVSSGLQ-G--ENDTTPREDIIGPNGRK---RSYTL 416
LV G D +KVW + +L Q+ G Q G D +P +I+ + R + L
Sbjct: 34 LVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDL 93
Query: 417 YQGH------SGPV--YSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
G +GPV +S +FSP + + S + ++ + +
Sbjct: 94 ESGKQIRAIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILS 153
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
+ ++P G Y AS + D I+ + + L + GH + + + + + T S D
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 529 VRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
+++++V GH S +L++A SPD + S D ++ +WD+++ CV + H
Sbjct: 214 IKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDH 273
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWD 617
VW + Y+ GS + S + D + ++D
Sbjct: 274 QDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
Score = 199 (75.1 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 56/239 (23%), Positives = 112/239 (46%)
Query: 353 GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQ--AVSSG------LQGENDT------ 398
G+ +S G+++A D+ +++WD+ G+Q A+ +G + D+
Sbjct: 66 GVVSVDVSPSGNIMASSSLDAHIRLWDLES-GKQIRAIDAGPVDAWSVAFSPDSQHLATG 124
Query: 399 --TPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANL 456
+ +I G K+ Y+L + S ++SP G ++ S + D I ++ L
Sbjct: 125 SHVGKVNIFGVETGKKEYSL-DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLL 183
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN 516
+GH P+ + F+P ++S D +I+ + ++GH S V V + +
Sbjct: 184 HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPD 243
Query: 517 CNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWD 575
+ + SSDK+V++WDVS+ CV F+ H+ + + + +G + S +D I ++D
Sbjct: 244 DTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
Score = 187 (70.9 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 52/179 (29%), Positives = 87/179 (48%)
Query: 467 WDVQFNPQGHYFASSSHDRTARIW--SMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGS 524
W N S S D ++W S +R++ + GH V V + N +A+ S
Sbjct: 24 WGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGNIMASSS 83
Query: 525 SDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTP 584
D +RLWD+ SG+ +R S+A SPD +++A+G G + ++ + +G+
Sbjct: 84 LDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYS 143
Query: 585 LMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLP 643
L + ++AYS +G LASG+ D + ++D+ T K+L T E +RSL P
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG-KLLHTLEGHAMP-IRSLTFSP 200
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 258 (95.9 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 48/107 (44%), Positives = 68/107 (63%)
Query: 526 DKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPL 585
DKTVRLW G VR+F GHR +LSL+ SP+G+Y+AS ED + +WDLASG L
Sbjct: 1 DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKEL 60
Query: 586 MGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
GHT + +LA+S + L+AS S D +V++WD+ ++ + SG
Sbjct: 61 RGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSG 107
Score = 192 (72.6 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 37/104 (35%), Positives = 57/104 (54%)
Query: 484 DRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIF 543
D+T R+WS + +R+ GH V + + N Y+A+ D+ ++LWD++SG +
Sbjct: 1 DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKEL 60
Query: 544 IGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMG 587
GH I SLA SPD +AS D ++ +WD+ S C TP G
Sbjct: 61 RGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADG 104
Score = 175 (66.7 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 37/123 (30%), Positives = 63/123 (51%)
Query: 442 DTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIM 501
D T+RLWS + ++ + GH PV + F+P G Y AS+ D+ ++W + + +
Sbjct: 1 DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKEL 60
Query: 502 AGHLSDVDCVRWHINCNYIATGSSDKTVRLWDV-----------SSGECVRIFIGHRSMI 550
GH + + + + IA+ S D +VR+WD+ SSGE V ++ G S +
Sbjct: 61 RGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNV 120
Query: 551 LSL 553
LS+
Sbjct: 121 LSV 123
Score = 142 (55.0 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 413 SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFN 472
S L+ GH GPV S SFSP G ++ S+ D ++LW +GH + + F+
Sbjct: 14 SVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFS 73
Query: 473 PQGHYFASSSHDRTARIWSM 492
P AS+S D + R+W +
Sbjct: 74 PDSGLIASASMDNSVRVWDI 93
>UNIPROTKB|E1BB14 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:DAAA02014455 IPI:IPI00703992 RefSeq:NP_001179276.1
UniGene:Bt.16171 ProteinModelPortal:E1BB14
Ensembl:ENSBTAT00000021348 GeneID:513340 KEGG:bta:513340
NextBio:20870819 Uniprot:E1BB14
Length = 340
Score = 257 (95.5 bits), Expect = 4.0e-21, P = 4.0e-21
Identities = 63/230 (27%), Positives = 109/230 (47%)
Query: 397 DTTPREDIIGPN--GR--KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
DTT E + G GR R+ +GH +Y+ ++ ++S+S D + +W T
Sbjct: 27 DTTLAELVSGLEVVGRVQMRTRRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYT 86
Query: 453 NANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSDV 508
+ + V + P G++ A D I+S+ ++ R ++ H +
Sbjct: 87 TNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYL 146
Query: 509 DCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDED 568
C R+ ++ N I T S D T LWD+ +G+ +F+GH +SLA+SPD R SG D
Sbjct: 147 SCCRF-LDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFRLFISGACD 205
Query: 569 GTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
+ +WD+ G C GH S + + + G + +GS D + +L+D+
Sbjct: 206 ASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDL 255
Score = 223 (83.6 bits), Expect = 8.3e-16, Sum P(2) = 8.3e-16
Identities = 59/202 (29%), Positives = 98/202 (48%)
Query: 420 HSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
H+G + F L D I++SS DTT LW + + GH + +P F
Sbjct: 142 HTGYLSCCRF--LDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFRLF 199
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
S + D +A++W + + GH SD++ + + N I TGS D + RL+D+ + +
Sbjct: 200 ISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQ 259
Query: 539 CVRIFIGHRSMIL---SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTL 595
+ + H S+I S+A S GR + +G +D +WD V L GH + V L
Sbjct: 260 ELTTY-AHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMKCERVGILSGHDNRVSCL 318
Query: 596 AYSCEGSLLASGSADCTVKLWD 617
+ +G +A+GS D +K+W+
Sbjct: 319 GVTADGMAVATGSWDSFLKIWN 340
Score = 204 (76.9 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 56/219 (25%), Positives = 106/219 (48%)
Query: 413 SYTLYQGHSGPVYSA-----SFSPLGDFILSSSADTTIRLWSTKLN-ANLVCYK---GHN 463
+YT + H+ P+ S+ +++P G+F+ D ++S K N+ + H
Sbjct: 84 TYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHT 143
Query: 464 YPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY--IA 521
+ +F + +SS D T +W ++ Q + GH D C+ ++ ++
Sbjct: 144 GYLSCCRFLDDNN-IVTSSGDTTCALWDIETGQQKTVFVGHTGD--CMSLAVSPDFRLFI 200
Query: 522 TGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRC 581
+G+ D + +LWDV G C + F GH S I ++ P+G + +G +D + ++DL + +
Sbjct: 201 SGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQE 260
Query: 582 VTPLMGHTS--C-VWTLAYSCEGSLLASGSADCTVKLWD 617
+T H S C + ++A+S G LL +G D +WD
Sbjct: 261 LTTY-AHESIICGITSVAFSLSGRLLFAGYDDFNCNVWD 298
Score = 140 (54.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 40/166 (24%), Positives = 71/166 (42%)
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
+GH ++ + + S+S D +W + + S V + + N+
Sbjct: 52 RGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNF 111
Query: 520 IATGSSDKTVRLWDVSSGEC-VRIF--IGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
+A G D ++ + S E V++ + + LS D + + D T +WD+
Sbjct: 112 VACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALWDI 171
Query: 577 ASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTST 622
+G+ T +GHT +LA S + L SG+ D + KLWDV T
Sbjct: 172 ETGQQKTVFVGHTGDCMSLAVSPDFRLFISGACDASAKLWDVREGT 217
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 48/203 (23%), Positives = 87/203 (42%)
Query: 348 INTHNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT---TP--R 401
++ H G L+C D ++V D++ +WD+ Q+ V G G+ + +P R
Sbjct: 139 LSAHTGYLSCCRFLDDNNIVTSS-GDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFR 197
Query: 402 EDIIGPNGRK------RSYTLYQ---GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
I G R T Q GH + + F P G+ I + S D + RL+ +
Sbjct: 198 LFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRA 257
Query: 453 NANLVCYKGHNY--PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDC 510
+ L Y + + V F+ G + D +W + + + I++GH + V C
Sbjct: 258 DQELTTYAHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMKCERVGILSGHDNRVSC 317
Query: 511 VRWHINCNYIATGSSDKTVRLWD 533
+ + +ATGS D +++W+
Sbjct: 318 LGVTADGMAVATGSWDSFLKIWN 340
Score = 37 (18.1 bits), Expect = 8.3e-16, Sum P(2) = 8.3e-16
Identities = 7/18 (38%), Positives = 8/18 (44%)
Query: 362 DGSLVAGGFSDSSLKVWD 379
D L+ D L VWD
Sbjct: 66 DSKLLVSASQDGKLIVWD 83
>UNIPROTKB|P79147 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U52916 EMBL:AY751537 EMBL:DQ672621
RefSeq:NP_001003004.1 UniGene:Cfa.5 ProteinModelPortal:P79147
SMR:P79147 PRIDE:P79147 GeneID:403511 KEGG:cfa:403511 CTD:2784
eggNOG:NOG269251 KO:K07825 NextBio:20817024 Uniprot:P79147
Length = 340
Score = 257 (95.5 bits), Expect = 4.0e-21, P = 4.0e-21
Identities = 63/243 (25%), Positives = 114/243 (46%)
Query: 397 DTTPREDIIGPN--GR--KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
DTT E + G GR R+ +GH +Y+ ++ ++S+S D + +W T
Sbjct: 27 DTTLAELVSGLEVVGRVQMRTRRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYT 86
Query: 453 NANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSDV 508
+ + V + P G++ A D I+S+ ++ R ++ H +
Sbjct: 87 TNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYL 146
Query: 509 DCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDED 568
C R+ ++ N I T S D T LWD+ +G+ +F+GH +SLA+SPD + SG D
Sbjct: 147 SCCRF-LDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACD 205
Query: 569 GTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTE 628
+ +WD+ G C GH S + + + G + +GS D + +L+D+ ++
Sbjct: 206 ASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYS 265
Query: 629 EKS 631
++S
Sbjct: 266 DES 268
Score = 223 (83.6 bits), Expect = 8.3e-16, Sum P(2) = 8.3e-16
Identities = 58/201 (28%), Positives = 97/201 (48%)
Query: 420 HSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
H+G + F L D I++SS DTT LW + + GH + +P F
Sbjct: 142 HTGYLSCCRF--LDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLF 199
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
S + D +A++W + + GH SD++ + + N I TGS D + RL+D+ + +
Sbjct: 200 ISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQ 259
Query: 539 CVRIFIGHRSM--ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+ + + I S+A S GR + +G +D +WD G V L GH + V L
Sbjct: 260 ELTAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNIWDSMKGERVGILSGHDNRVSCLG 319
Query: 597 YSCEGSLLASGSADCTVKLWD 617
+ +G +A+GS D +K+W+
Sbjct: 320 VTADGMAVATGSWDSFLKVWN 340
Score = 203 (76.5 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 55/225 (24%), Positives = 107/225 (47%)
Query: 413 SYTLYQGHSGPVYSA-----SFSPLGDFILSSSADTTIRLWSTKLN-ANLVCYK---GHN 463
+YT + H+ P+ S+ +++P G+F+ D ++S K N+ + H
Sbjct: 84 TYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHT 143
Query: 464 YPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY--IA 521
+ +F + +SS D T +W ++ Q + GH D C+ ++ ++
Sbjct: 144 GYLSCCRFLDDNN-IVTSSGDTTCALWDIETGQQKTVFVGHTGD--CMSLAVSPDFKLFI 200
Query: 522 TGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRC 581
+G+ D + +LWDV G C + F GH S I ++ P+G + +G +D + ++DL + +
Sbjct: 201 SGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQE 260
Query: 582 VTPLMGHTS-C-VWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
+T + C + ++A+S G LL +G D +WD +V
Sbjct: 261 LTAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNIWDSMKGERV 305
Score = 131 (51.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 45/203 (22%), Positives = 85/203 (41%)
Query: 348 INTHNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT---TPRED 403
++ H G L+C D ++V D++ +WD+ Q+ V G G+ + +P
Sbjct: 139 LSAHTGYLSCCRFLDDNNIVTSS-GDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFK 197
Query: 404 IIGPNGRKRSYTLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
+ S L+ GH + + F P G+ I + S D + RL+ +
Sbjct: 198 LFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRA 257
Query: 453 NANLVCYKGHNY--PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDC 510
+ L Y + + V F+ G + D IW + + + I++GH + V C
Sbjct: 258 DQELTAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNIWDSMKGERVGILSGHDNRVSC 317
Query: 511 VRWHINCNYIATGSSDKTVRLWD 533
+ + +ATGS D +++W+
Sbjct: 318 LGVTADGMAVATGSWDSFLKVWN 340
Score = 37 (18.1 bits), Expect = 8.3e-16, Sum P(2) = 8.3e-16
Identities = 7/18 (38%), Positives = 8/18 (44%)
Query: 362 DGSLVAGGFSDSSLKVWD 379
D L+ D L VWD
Sbjct: 66 DSKLLVSASQDGKLIVWD 83
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 275 (101.9 bits), Expect = 4.0e-21, P = 4.0e-21
Identities = 67/211 (31%), Positives = 107/211 (50%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHN--------YPV---W 467
G P+ FS G+ S S +++W++ + + ++GH YP+ W
Sbjct: 170 GGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAW 229
Query: 468 DVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDK 527
D + + A+ + D T +W + PL + GHL+ V V +H + +Y+ + S D
Sbjct: 230 DA--DSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDT 287
Query: 528 TVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMG 587
T RLWDV +G + + GH I S+A PDG ++SG D +WDL SG+ + L
Sbjct: 288 TWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDE 347
Query: 588 HTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
H + +A+S G LA+ SAD TVK+WD+
Sbjct: 348 HIRQIVAMAWSPNGYQLATSSADDTVKIWDL 378
Score = 269 (99.8 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 55/202 (27%), Positives = 98/202 (48%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH V +F P GD+++S+S DTT RLW L+ +GH+ ++ + P G
Sbjct: 262 EGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSL 321
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
+S +D RIW + + + ++ H+ + + W N +AT S+D TV++WD+
Sbjct: 322 VSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKV 381
Query: 538 ECVRIFIGHRSMILSLAMSPDG--RYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTL 595
H S++ + G R++A+ DG + +W+ + + ++GH V ++
Sbjct: 382 SLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWNPLNCSLIKSMVGHEEKVMSV 441
Query: 596 -AYSCEGSLLASGSADCTVKLW 616
Y G S D T+KLW
Sbjct: 442 DGY---GDRFISSGYDRTIKLW 460
Score = 250 (93.1 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 60/213 (28%), Positives = 103/213 (48%)
Query: 416 LYQGHSGPVYSASFSPL-----GDF----ILSSSADTTIRLWSTKLNANLVCYKGHNYPV 466
L++GH+ V + PL D + + +AD T+ LW + L+ +GH V
Sbjct: 209 LFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARV 268
Query: 467 WDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSD 526
V F+P G Y S+S D T R+W + L + GH + + + + +++G +D
Sbjct: 269 GRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGND 328
Query: 527 KTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLM 586
R+WD+ SG+ + + H I+++A SP+G +A+ D T+ +WDL +
Sbjct: 329 AIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIP 388
Query: 587 GHTSCVWTLAYSCEG--SLLASGSADCTVKLWD 617
H+S V + Y G +A+ D VKLW+
Sbjct: 389 AHSSLVSDVRYIESGVNRFIATSGYDGCVKLWN 421
Score = 232 (86.7 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 54/208 (25%), Positives = 102/208 (49%)
Query: 431 PLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIW 490
P+ + +LS + L +L + + G P+ V+F+ G++FAS S ++W
Sbjct: 144 PVPEIVLSGKSSIE-HLQKAELMGSQI---GGERPIAIVRFSNNGNHFASGSWGGQVKVW 199
Query: 491 SMDRIQPLRIMAGHLSDVDCVRWHINCNY---------IATGSSDKTVRLWDVSSGECVR 541
+ D + +++ GH V + W+ C +ATG++D TV LW S +
Sbjct: 200 NSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLL 259
Query: 542 IFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEG 601
GH + + +A P G Y+ S D T +WD+ +G + GH+ ++++A +G
Sbjct: 260 RLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDG 319
Query: 602 SLLASGSADCTVKLWDVTTSTKVLKTEE 629
SL++SG D ++WD+ + ++ +E
Sbjct: 320 SLVSSGGNDAIGRIWDLRSGKSIMVLDE 347
Score = 193 (73.0 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 43/162 (26%), Positives = 82/162 (50%)
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQG 475
+ +GHS ++S + P G + S D R+W + +++ H + + ++P G
Sbjct: 302 MQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNG 361
Query: 476 HYFASSSHDRTARIWSMDRIQPLRIMAGH---LSDVDCVRWHINCNYIATGSSDKTVRLW 532
+ A+SS D T +IW + ++ + H +SDV + +N +IAT D V+LW
Sbjct: 362 YQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVN-RFIATSGYDGCVKLW 420
Query: 533 DVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
+ + ++ +GH ++S+ D R+++SG D TI +W
Sbjct: 421 NPLNCSLIKSMVGHEEKVMSVDGYGD-RFISSG-YDRTIKLW 460
Score = 153 (58.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 43/153 (28%), Positives = 71/153 (46%)
Query: 491 SMDRIQPLRIMAGHLSD---VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHR 547
S++ +Q +M + + VR+ N N+ A+GS V++W+ + V++F GH
Sbjct: 155 SIEHLQKAELMGSQIGGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHT 214
Query: 548 SMILSLAMSP-------DGRYM--ASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS 598
+ L P D + A+G D T+ +W + + L GH + V +A+
Sbjct: 215 DRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFH 274
Query: 599 CEGSLLASGSADCTVKLWDVTTSTKVLKTEEKS 631
G L S S D T +LWDV T ++L E S
Sbjct: 275 PSGDYLVSASFDTTWRLWDVHTGVELLMQEGHS 307
Score = 127 (49.8 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 46/184 (25%), Positives = 89/184 (48%)
Query: 365 LVAGGFSDSSLKVWDMAK----LGQQAVSSGL-------QGENDTTPREDIIGP--NGRK 411
LV+ F D++ ++WD+ L Q+ S G+ G ++ D IG + R
Sbjct: 280 LVSASF-DTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRS 338
Query: 412 -RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQ 470
+S + H + + ++SP G + +SSAD T+++W + + H+ V DV+
Sbjct: 339 GKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVR 398
Query: 471 FNPQG--HYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
+ G + A+S +D ++W+ ++ M GH V V + + +I++G D+T
Sbjct: 399 YIESGVNRFIATSGYDGCVKLWNPLNCSLIKSMVGHEEKVMSVDGYGD-RFISSGY-DRT 456
Query: 529 VRLW 532
++LW
Sbjct: 457 IKLW 460
Score = 47 (21.6 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 33/161 (20%), Positives = 63/161 (39%)
Query: 233 EDSLENRLEKTGLISDSEKAEGENKEAEIDENKKRPVEGGK--QGASIKKLKKDKAINAT 290
ED+L R L+ + + EG+N ++D+ +E QG+ + + K +
Sbjct: 69 EDALARRQRLQQLMIE-KSLEGDNP-LDVDQGASENIEKETYVQGSHELLVARKKIALYS 126
Query: 291 AKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLSSAALPSVSFYTFINT 350
+ ++L R+K + + +P V + +L + HL A L I
Sbjct: 127 LEKAKL---------RLKKEREISEIP--VPEIVLSGKSSIEHLQKAELMGSQ----IGG 171
Query: 351 HNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSG 391
+ S +G+ A G +KVW+ L + + G
Sbjct: 172 ERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRG 212
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 256 (95.2 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 64/186 (34%), Positives = 97/186 (52%)
Query: 436 ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQ--GHYFASSSHDRTARIWSMD 493
IL+ S D+T LW + L + GH+ V + P G+ F S S DR A IW M
Sbjct: 173 ILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMR 232
Query: 494 RIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMIL-- 551
++ GH SDV+ V++H + IATGS D + RL+D+ + V +F S+I
Sbjct: 233 SGHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADREVAVF-AKESIIFGV 291
Query: 552 -SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSAD 610
S+ S GR + +G D T+ +WD V L GH + V + S +G+ L++GS D
Sbjct: 292 NSVDFSVSGRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPDGTALSTGSWD 351
Query: 611 CTVKLW 616
T+++W
Sbjct: 352 YTIRVW 357
Score = 222 (83.2 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 61/218 (27%), Positives = 101/218 (46%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGH--NYPV-WDVQ--FN 472
+GH V +SP I+SSS D + +W N K H P W + +
Sbjct: 67 KGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDA-FTTN----KEHAVTMPTTWIMACAYA 121
Query: 473 PQGHYFASSSHDRTARIWSMDRIQPL----RIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
P G++ A D ++ + + + R + H S + C + + I TGS D T
Sbjct: 122 PSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDST 181
Query: 529 VRLWDVSSGECVRIFIGHRSMILSLAMSPD--GRYMASGDEDGTIMMWDLASGRCVTPLM 586
LWDV SG+ ++ F GH ++++ ++P+ G SG D +WD+ SG V
Sbjct: 182 CALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFE 241
Query: 587 GHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
GH S V ++ + G +A+GS D + +L+D+ +V
Sbjct: 242 GHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADREV 279
Score = 205 (77.2 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
Identities = 46/162 (28%), Positives = 81/162 (50%)
Query: 417 YQGHSGPVYSASFSP--LGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQ 474
+ GHSG V + +P G+ +S S D +W + + ++GH V V+F+P
Sbjct: 196 FHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPC 255
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGH--LSDVDCVRWHINCNYIATGSSDKTVRLW 532
G A+ S D + R++ M + + + A + V+ V + ++ + G +D TV LW
Sbjct: 256 GDAIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNLW 315
Query: 533 DVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
D E V + GH + + + +SPDG +++G D TI +W
Sbjct: 316 DTLKSERVCLLYGHENKVSCVQVSPDGTALSTGSWDYTIRVW 357
Score = 201 (75.8 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 54/210 (25%), Positives = 97/210 (46%)
Query: 424 VYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK---GHNYPVWDVQFNPQG-HYFA 479
+ + +++P G+F+ D + ++ + + K G + P
Sbjct: 115 IMACAYAPSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQIL 174
Query: 480 SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN--CNYIATGSSDKTVRLWDVSSG 537
+ S D T +W ++ Q L+ GH DV + N N +GS D+ +WD+ SG
Sbjct: 175 TGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSG 234
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVW---T 594
V+ F GH+S + S+ P G +A+G +D + ++D+ + R V + S ++ +
Sbjct: 235 HVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADREVA-VFAKESIIFGVNS 293
Query: 595 LAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
+ +S G LL +G D TV LWD S +V
Sbjct: 294 VDFSVSGRLLFAGYNDYTVNLWDTLKSERV 323
Score = 148 (57.2 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 50/213 (23%), Positives = 91/213 (42%)
Query: 432 LGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWS 491
L D LS+ A+ ++ + V KGH V ++P + SSS D IW
Sbjct: 40 LNDVNLSNIAERLEQIAYVNIKPRKVL-KGHQAKVLCTDWSPDKRHIISSSQDGRLIIWD 98
Query: 492 MDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE---CVRIFIGHRS 548
+ + + + + N++A G D V ++ ++S E + +G +
Sbjct: 99 AFTTNKEHAVTMPTTWIMACAYAPSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHT 158
Query: 549 MILSLAMSPDG-RYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT--LAYSCEGSLLA 605
+S + P+ + + +G D T +WD+ SG+ + GH+ V LA + G+
Sbjct: 159 SYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFV 218
Query: 606 SGSADCTVKLWDVTTSTKVLKTE-EKSGTNRLR 637
SGS D +WD+ + V E +S N ++
Sbjct: 219 SGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVK 251
Score = 43 (20.2 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 25/98 (25%), Positives = 35/98 (35%)
Query: 286 AINATAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILED--LRNRVH-LSSAALPSV 342
A NA A + A+ V A +K L E E+ L D L N L A ++
Sbjct: 8 ASNANANATEKMASLVREAENLKTKL-------EEERQKLNDVNLSNIAERLEQIAYVNI 60
Query: 343 SFYTFINTHNG-LNCASISQDGSLVAGGFSDSSLKVWD 379
+ H + C S D + D L +WD
Sbjct: 61 KPRKVLKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWD 98
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 264 (98.0 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 58/202 (28%), Positives = 101/202 (50%)
Query: 435 FILSSSADTTIRLWS------TKLNANLVC----------YKGHNYPVWDVQFNPQGHYF 478
F+++SS D TI++W+ +K A L+ +GH+ + V +P
Sbjct: 446 FVVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQMTERGHDKDINSVAVSPNDKLI 505
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
A+ S DR A++WS L + GH + CV++ +AT S+D T++LW +
Sbjct: 506 ATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFS 565
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS 598
C++ F GH + +L + G + SG DG + +W + + CV L GH +W L +
Sbjct: 566 CLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWTIKTNECVKTLDGHEDKIWGLHTN 625
Query: 599 CEGSLLASGSADCTVKLW-DVT 619
+ ++ + S+D ++ LW DVT
Sbjct: 626 KQDDMVVTASSDSSITLWKDVT 647
Score = 217 (81.4 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 56/221 (25%), Positives = 96/221 (43%)
Query: 354 LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRS 413
++C+ + + S V D ++KVW++ + + L I GP
Sbjct: 437 VSCSRLKE--SFVVTSSQDCTIKVWNIPESLTSKAKAAL-----------ISGPETLHAQ 483
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNP 473
T +GH + S + SP I + S D +LWS + L + GH +W VQF+P
Sbjct: 484 MT-ERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSP 542
Query: 474 QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
A+SS D T ++W + L+ GH + V + + + +G SD ++LW
Sbjct: 543 VDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWT 602
Query: 534 VSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
+ + ECV+ GH I L + + + D +I +W
Sbjct: 603 IKTNECVKTLDGHEDKIWGLHTNKQDDMVVTASSDSSITLW 643
Score = 178 (67.7 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 45/166 (27%), Positives = 79/166 (47%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKG-HNYPVWDVQFN 472
++L Q + S SP + +++ S ++ W+ + N + +K H PV + F+
Sbjct: 60 HSLEQDDQEDITSFVLSPDDEVLVTGSRALLLKQWNWRENRCVRTWKAVHIAPVATMVFD 119
Query: 473 PQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH--INCNYIATGSSDKTVR 530
A+ D T +IW M + + G V V +H I+ + + S D +R
Sbjct: 120 STSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIR 179
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
+WD++S +CV + GH S + SLA + DG + S D M+W+L
Sbjct: 180 IWDLNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNL 225
Score = 168 (64.2 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 41/156 (26%), Positives = 71/156 (45%)
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIM-AGHLSDVDCVRWHINCNYIATGSSDKTVR 530
+P + S + W+ + +R A H++ V + + +ATG D T++
Sbjct: 76 SPDDEVLVTGSRALLLKQWNWRENRCVRTWKAVHIAPVATMVFDSTSTLLATGGCDSTIK 135
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPD-GRY-MASGDEDGTIMMWDLASGRCVTPLMGH 588
+WD+ C G ++ + PD R + S D I +WDL S +CV L GH
Sbjct: 136 IWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLDGH 195
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
S V +LA++ +G+ L S D +W++ T +
Sbjct: 196 FSAVTSLAFTADGNTLISSGRDKICMVWNLKTRESI 231
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 40/176 (22%), Positives = 76/176 (43%)
Query: 420 HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFA 479
H PV + F + + D+TI++W KG + V V+F+P
Sbjct: 109 HIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQ 168
Query: 480 --SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
SSS D RIW ++ + + ++ GH S V + + + N + + DK +W++ +
Sbjct: 169 LFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTR 228
Query: 538 ECVR---IFIGHRSMIL--------SLAMSPDGRYMASGDEDGTIMMWDLASGRCV 582
E +R I+ + +L L + G + + G + +W++A+ CV
Sbjct: 229 ESIRTIPIYESVEAAVLLPEQGDFSQLGVKKQGLHFLTAGSKGVLKVWEVATAACV 284
Score = 137 (53.3 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 43/175 (24%), Positives = 84/175 (48%)
Query: 473 PQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW-HINCNYIATGSSDKTVRL 531
P+ + + S + + +Q + +AG+ +V V++ ++I ++ +++
Sbjct: 312 PERNEIVTVSVEHNIVFYDAQTLQLRKQLAGYNDEVLDVKFLGPGDSHIVVATNSPQLKV 371
Query: 532 WDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL-ASGR--CVTPLMGH 588
+++S+ C +I GH IL+L + G S +D +I +W + GR CV +GH
Sbjct: 372 FELSTSHC-QILYGHTETILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQGLGH 430
Query: 589 TSCVWTLAYS-CEGSLLASGSADCTVKLWDVTTS-TKVLKTEEKSGTNRLRSLKT 641
V ++ S + S + + S DCT+K+W++ S T K SG L + T
Sbjct: 431 AHGVGAVSCSRLKESFVVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQMT 485
Score = 66 (28.3 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 27/109 (24%), Positives = 46/109 (42%)
Query: 364 SLVAGGFSDSSLKVWDMAKL-------GQQAVS---------SGLQGENDTTPREDIIGP 407
+L+A G DS++K+WDM K G V S LQ + + + I
Sbjct: 123 TLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWD 182
Query: 408 NGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANL 456
+ + GH V S +F+ G+ ++SS D +W+ K ++
Sbjct: 183 LNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRESI 231
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 277 (102.6 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 53/182 (29%), Positives = 95/182 (52%)
Query: 436 ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRI 495
+ S +AD +++LWS + + +GH V V ++P G + ++ +DR+ R+W ++
Sbjct: 295 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ 354
Query: 496 QPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAM 555
+ + GH V + +H + + TG D R+WD+ +G C+ GH I ++
Sbjct: 355 EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISF 414
Query: 556 SPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS-CEGSLLASGSADCTVK 614
SP+G ++A+G D T +WDL RCV + H + V + + G L +G+ D T K
Sbjct: 415 SPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAK 474
Query: 615 LW 616
+W
Sbjct: 475 IW 476
Score = 265 (98.3 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 56/200 (28%), Positives = 98/200 (49%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V + P G F+ ++ D + RLW + ++ +GH+ V+D+ F+ G
Sbjct: 319 EGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSL 378
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
+ D R+W + + + + GHL ++ + + N +IATGS D T ++WD+
Sbjct: 379 AGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQR 438
Query: 538 ECVRIFIGHRSMILSLAMSP-DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
CV H++++ + P G ++ +G D T +W + L GH V L
Sbjct: 439 RCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLD 498
Query: 597 YSCEGSLLASGSADCTVKLW 616
S +G L+A+ S D T KLW
Sbjct: 499 ISSDGQLIATCSYDRTFKLW 518
Score = 265 (98.3 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 61/208 (29%), Positives = 102/208 (49%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY- 477
G P+ FSP + ++ +LWS + L +GHN V + F+P+
Sbjct: 228 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVS 287
Query: 478 -------FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVR 530
AS + D + ++WS+D +P+ + GH V V WH + ++ T D++ R
Sbjct: 288 LDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWR 347
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
LWD+ + E + GH + +A DG +G D +WDL +GRC+ L GH
Sbjct: 348 LWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLK 407
Query: 591 CVWTLAYSCEGSLLASGSADCTVKLWDV 618
++ +++S G +A+GS D T K+WD+
Sbjct: 408 EIYGISFSPNGYHIATGSGDNTCKVWDL 435
Score = 180 (68.4 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 44/183 (24%), Positives = 88/183 (48%)
Query: 455 NLVCYK-GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW 513
N C + G + P+ F+P A++ ++WS+ L + GH ++V + +
Sbjct: 221 NNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVF 280
Query: 514 H----INCNY----IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASG 565
H ++ + +A+ ++D +V+LW + S E V GH + + P GR++ +
Sbjct: 281 HPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTT 340
Query: 566 DEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
D + +WDL + + GH+ V+ +A+ +GSL +G D ++WD+ T ++
Sbjct: 341 CYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIM 400
Query: 626 KTE 628
E
Sbjct: 401 FLE 403
Score = 171 (65.3 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 39/122 (31%), Positives = 59/122 (48%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
R +GH +Y SFSP G I + S D T ++W + + H V V+F
Sbjct: 397 RCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKF 456
Query: 472 NP-QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVR 530
P G + + ++D TA+IW+ PL+ +AGH V + + IAT S D+T +
Sbjct: 457 EPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFK 516
Query: 531 LW 532
LW
Sbjct: 517 LW 518
Score = 43 (20.2 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 19/86 (22%), Positives = 39/86 (45%)
Query: 222 INQKEVHWGLLEDSLENRLEK--TGLIS-DSEKAEGENKEAEIDENKKRPVE---GGKQG 275
+ + +++G LE+ RL K +G++ + KA E I + +E +Q
Sbjct: 24 VKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEEHISERQA 83
Query: 276 ---ASIKKLKKDKAINATAKTSRLEA 298
A ++ K+ + IN + S ++A
Sbjct: 84 EVLAEFERRKRARQINVSTDDSEVKA 109
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 275 (101.9 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 53/182 (29%), Positives = 95/182 (52%)
Query: 436 ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRI 495
+ S +AD +++LWS + + +GH V V ++P G + ++ +DR+ R+W ++
Sbjct: 313 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ 372
Query: 496 QPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAM 555
+ + GH V + +H + + TG D R+WD+ +G C+ GH I +
Sbjct: 373 EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINF 432
Query: 556 SPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS-CEGSLLASGSADCTVK 614
SP+G ++A+G D T +WDL RCV + H + V + + G+ L +G+ D T K
Sbjct: 433 SPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAK 492
Query: 615 LW 616
+W
Sbjct: 493 IW 494
Score = 268 (99.4 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 56/200 (28%), Positives = 98/200 (49%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V + P G F+ ++ D + RLW + ++ +GH+ V+D+ F+ G
Sbjct: 337 EGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSL 396
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
+ D R+W + + + + GHL ++ + + N +IATGS D T ++WD+
Sbjct: 397 AGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQR 456
Query: 538 ECVRIFIGHRSMILSLAMSP-DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
CV H++++ + P G ++ +G D T +W + L GH V L
Sbjct: 457 RCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLD 516
Query: 597 YSCEGSLLASGSADCTVKLW 616
S +G L+A+ S D T KLW
Sbjct: 517 ISSDGQLIATCSYDRTFKLW 536
Score = 264 (98.0 bits), Expect = 8.4e-20, Sum P(2) = 8.4e-20
Identities = 62/209 (29%), Positives = 103/209 (49%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLV-CYKGHNYPVWDVQFNPQGHY 477
G P+ FSP + ++ +LWS + NL+ +GHN V + F+P+
Sbjct: 246 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVP-DCNLLHTLRGHNTNVGAIVFHPKSTV 304
Query: 478 --------FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
AS + D + ++WS+D +P+ + GH V V WH + ++ T D++
Sbjct: 305 SLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSW 364
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
RLWD+ + E + GH + +A DG +G D +WDL +GRC+ L GH
Sbjct: 365 RLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL 424
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLWDV 618
++ + +S G +A+GS D T K+WD+
Sbjct: 425 KEIYGINFSPNGYHIATGSGDNTCKVWDL 453
Score = 180 (68.4 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 44/183 (24%), Positives = 88/183 (48%)
Query: 455 NLVCYK-GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW 513
N C + G + P+ F+P A++ ++WS+ L + GH ++V + +
Sbjct: 239 NNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVF 298
Query: 514 H----INCNY----IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASG 565
H ++ + +A+ ++D +V+LW + S E V GH + + P GR++ +
Sbjct: 299 HPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTT 358
Query: 566 DEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
D + +WDL + + GH+ V+ +A+ +GSL +G D ++WD+ T ++
Sbjct: 359 CYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIM 418
Query: 626 KTE 628
E
Sbjct: 419 FLE 421
Score = 170 (64.9 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 38/122 (31%), Positives = 60/122 (49%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
R +GH +Y +FSP G I + S D T ++W + + H V V+F
Sbjct: 415 RCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKF 474
Query: 472 NP-QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVR 530
P G++ + ++D TA+IW+ PL+ +AGH V + + IAT S D+T +
Sbjct: 475 EPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFK 534
Query: 531 LW 532
LW
Sbjct: 535 LW 536
Score = 46 (21.3 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 26/112 (23%), Positives = 48/112 (42%)
Query: 198 QPSSISDDAE-IVTLIGSNQD-AANQINQKEVHWGLLEDSLENRLEK--TGLIS-DSEKA 252
+PS S A T + D A + + +++G LE+ RL K +G++ + KA
Sbjct: 16 EPSMASSRASSTATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKA 75
Query: 253 EGENKEAEIDENKKRPVE---GGKQG---ASIKKLKKDKAINATAKTSRLEA 298
E I + +E +Q A ++ K+ + IN + S ++A
Sbjct: 76 GIEAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKA 127
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 279 (103.3 bits), Expect = 4.7e-21, P = 4.7e-21
Identities = 60/215 (27%), Positives = 108/215 (50%)
Query: 420 HSGPVYSASFSP-LGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
HS V S G + + D + +WS ++ GH P+ +Q + +
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELI 78
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
+ S + R+W ++ + LR + GH +++ + +H +++A+GS D ++LWDV
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKG 138
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY- 597
C+ + H + L SPDG+++AS +D T+ +WDL +G+ + GH V + +
Sbjct: 139 CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFH 198
Query: 598 -SCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKS 631
S E LLASGS+ T++ WD+ V EE++
Sbjct: 199 PSIE-YLLASGSSSMTIRFWDLEKFHVVSCIEEEA 232
Score = 254 (94.5 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 80/302 (26%), Positives = 128/302 (42%)
Query: 363 GSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTP--------REDIIGPNGRKRSY 414
G L+A G D + VW + K V S L G TTP +E++I + S
Sbjct: 33 GRLLATGGDDCRVNVWSVNK--PNCVMS-LTGH--TTPIESLQISAKEELIVAGSQSGSI 87
Query: 415 TLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHN 463
++ GH + S F P G F+ S S DT I+LW + + YK H
Sbjct: 88 RVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHT 147
Query: 464 YPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI-AT 522
V ++F+P G + AS++ D T ++W + + + GH V+ V +H + Y+ A+
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLAS 207
Query: 523 GSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCV 582
GSS T+R WD+ V + + + +PDG + G +D ++ ++ RC
Sbjct: 208 GSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD-SLRVYGWEPERCF 266
Query: 583 TPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTL 642
++ + V L+ C L+ A TV + V S G R L
Sbjct: 267 DVVVVNWGKVADLSV-CHNQLIGVSFAQSTVSSFVVDLSRVTKSGSVPHGLLRNNELLAQ 325
Query: 643 PT 644
PT
Sbjct: 326 PT 327
Score = 144 (55.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 55/218 (25%), Positives = 93/218 (42%)
Query: 359 ISQDGSLVAGGFSDSSLKVWDM--AK-----LGQQAVSSGLQ----------GENDTTPR 401
IS L+ G S++VWD+ AK LG +A L G DT
Sbjct: 71 ISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDT--- 127
Query: 402 EDI-IGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
DI + RK Y+ H+ V FSP G ++ S++ D T++LW + +
Sbjct: 128 -DIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFT 186
Query: 461 GHNYPVWDVQFNPQGHYF-ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN--C 517
GH PV V+F+P Y AS S T R W +++ + + + V C+ ++ + C
Sbjct: 187 GHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCC 246
Query: 518 NYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAM 555
Y G ++R++ C + + + + L++
Sbjct: 247 LY---GGFQDSLRVYGWEPERCFDVVVVNWGKVADLSV 281
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 256 (95.2 bits), Expect = 5.1e-21, P = 5.1e-21
Identities = 53/203 (26%), Positives = 97/203 (47%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA-NLVCYKGHNYPVWDVQFNPQGH 476
+GH G +++A F P G+ +LSS D I +W + N++ GH+ V + F P G
Sbjct: 52 EGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGS 111
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW-HINCNYIATGSSDKTVRLWDVS 535
+ + S D+T W + Q R GH + V+ V+ + +GS D+T+++WD
Sbjct: 112 HIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDAR 171
Query: 536 SGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTL 595
+ + ++ G + SG D + +WD+ + L GH+ + +
Sbjct: 172 KKHAAHT-LESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGM 230
Query: 596 AYSCEGSLLASGSADCTVKLWDV 618
+ S EG + + + D T+++WDV
Sbjct: 231 SLSPEGDFILTNAMDNTLRVWDV 253
Score = 247 (92.0 bits), Expect = 5.7e-19, P = 5.7e-19
Identities = 66/224 (29%), Positives = 99/224 (44%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GHSG V A F+P G I + S D T+ W +KGH V VQ + +G
Sbjct: 96 GHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQL 155
Query: 479 -ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
S S DRT +IW + + V V + + +G D V++WD+
Sbjct: 156 LCSGSDDRTIKIWDARKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIRKQ 214
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL---ASG-RCVTPLMGHT---- 589
+ GH I +++SP+G ++ + D T+ +WD+ A G RCV GH
Sbjct: 215 AVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFE 274
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGT 633
+ A+S + SGSAD V +WDV T + K +G+
Sbjct: 275 KNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGS 318
Score = 217 (81.4 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 61/211 (28%), Positives = 99/211 (46%)
Query: 417 YQGHSGPVYSASFSPLGDFIL-SSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQG 475
++GH V S S G +L S S D TI++W + + + V V F G
Sbjct: 136 FKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESP-FQVTAVCFGDTG 194
Query: 476 HYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDV- 534
S D +IW + + L + GH + + ++I T + D T+R+WDV
Sbjct: 195 EQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVR 254
Query: 535 --SSGE-CVRIFIGHR----SMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMG 587
+ GE CV++F GH+ +L A SP + SG D + +WD+ + R + L G
Sbjct: 255 PYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPG 314
Query: 588 HTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
H V + +S + L+ SGS+D T+ L ++
Sbjct: 315 HNGSVNAVDFSPKEPLILSGSSDKTLYLGEI 345
Score = 212 (79.7 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 50/172 (29%), Positives = 87/172 (50%)
Query: 449 STKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSM-DRIQPLRIMAGHLSD 507
++ L A ++ +GH ++ +F+P+G SS DR IW + + + + M+GH
Sbjct: 41 TSNLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGA 100
Query: 508 VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYM-ASGD 566
V + + ++I T S+DKT+ WD+++G+ R F GH + + S+ S G+ + SG
Sbjct: 101 VMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGS 160
Query: 567 EDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
+D TI +WD L V + + G + SG D VK+WD+
Sbjct: 161 DDRTIKIWDARKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDI 211
Score = 179 (68.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 47/204 (23%), Positives = 97/204 (47%)
Query: 381 AKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSS 440
++ GQQ + SG +D T + I + ++TL V + F G+ ++S
Sbjct: 149 SRRGQQLLCSG---SDDRTIK--IWDARKKHAAHTLESPFQ--VTAVCFGDTGEQVISGG 201
Query: 441 ADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQP--- 497
D +++W + A L +GH+ + + +P+G + +++ D T R+W + P
Sbjct: 202 IDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGER 261
Query: 498 -LRIMAGHLSDVD--CVR--WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILS 552
+++ GH + + +R W + I +GS+D+ V +WDV++ + GH + +
Sbjct: 262 CVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNA 321
Query: 553 LAMSPDGRYMASGDEDGTIMMWDL 576
+ SP + SG D T+ + ++
Sbjct: 322 VDFSPKEPLILSGSSDKTLYLGEI 345
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 256 (95.2 bits), Expect = 5.1e-21, P = 5.1e-21
Identities = 58/218 (26%), Positives = 104/218 (47%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
R+ +GH +Y+ + ++S+S D + +W + + + V +
Sbjct: 2 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 61
Query: 472 NPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDK 527
P G++ A D I+S+ ++ R + GH + C R+ ++ N I T S D
Sbjct: 62 APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF-LDDNQIITSSGDT 120
Query: 528 TVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMG 587
T LWD+ +G+ F GH ++SL+++PDGR SG D +I +WD+ C +G
Sbjct: 121 TCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG 180
Query: 588 HTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
H S + +A+ G +GS D T +L+D+ ++L
Sbjct: 181 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL 218
Score = 244 (91.0 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 62/203 (30%), Positives = 101/203 (49%)
Query: 419 GHSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH+G + F L D I++SS DTT LW + V + GH+ V + P G
Sbjct: 97 GHTGYLSCCRF--LDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRT 154
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
F S + D + ++W + + GH SD++ V + N TGS D T RL+D+ +
Sbjct: 155 FVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRAD 214
Query: 538 ECVRIFIGHRSMIL---SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ + ++ H ++I S+A S GR + +G +D +WD G L GH + V
Sbjct: 215 QELLMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSC 273
Query: 595 LAYSCEGSLLASGSADCTVKLWD 617
L + +G +A+GS D +K+W+
Sbjct: 274 LGVTDDGMAVATGSWDSFLKIWN 296
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 38/153 (24%), Positives = 66/153 (43%)
Query: 499 RIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPD 558
R + GHL+ + + W + + + S D + +WD + V S +++ A +P
Sbjct: 5 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 64
Query: 559 GRYMASGDEDGTIMMWDLAS--G--RCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVK 614
G ++A G D ++ L + G R L GHT + + + ++ S S D T
Sbjct: 65 GNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITS-SGDTTCA 123
Query: 615 LWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKST 647
LWD+ T + + SG + SL P T
Sbjct: 124 LWDIETGQQTVGFAGHSGD--VMSLSLAPDGRT 154
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 280 (103.6 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 67/234 (28%), Positives = 114/234 (48%)
Query: 408 NGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVW 467
NG S TL Q H GP+++ ++ G+++LS+ D T +W + H+ P
Sbjct: 265 NGNLAS-TLGQ-HKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPAL 322
Query: 468 DVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDK 527
DV + FAS S D + + P++ GH ++V+ ++W + +A+ S D
Sbjct: 323 DVDWQ-NNMTFASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDM 381
Query: 528 TVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR---------YMASGDEDGTIMMWDLAS 578
T+++W + CV H I ++ SP G +AS D T+ +WD+
Sbjct: 382 TLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQ 441
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 632
G C LM H V+++A+S +G LASGS D V +W+ T S ++ + + +G
Sbjct: 442 GVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWN-TQSGSLVHSYQGTG 494
Score = 247 (92.0 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 60/208 (28%), Positives = 101/208 (48%)
Query: 420 HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFA 479
HS P + F S S D I + + + ++GH V ++++P G A
Sbjct: 317 HSAPALDVDWQNNMTFA-SCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLA 375
Query: 480 SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH------INCN---YIATGSSDKTVR 530
S S D T +IWSM + + + H ++ ++W N N +A+ S D TVR
Sbjct: 376 SCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVR 435
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
LWDV G C + H+ + S+A SPDG+Y+ASG D + +W+ SG V G T
Sbjct: 436 LWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVHSYQG-TG 494
Query: 591 CVWTLAYSCEGSLLASGSADCTVKLWDV 618
++ + ++ G + + ++D +V + D+
Sbjct: 495 GIFEVCWNARGDKVGASASDGSVCVLDL 522
Score = 242 (90.2 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 76/267 (28%), Positives = 122/267 (45%)
Query: 396 NDTTPRE---DI-IGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTK 451
N + P E D+ I PN T+ +GH V+ +++P+ D + S S D+T R+W+
Sbjct: 154 NHSKPMEIDGDVEIPPN----KATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLN 209
Query: 452 LNAN-----LV---CYK--GHNYP----VWDVQFNPQGHYFASSSHDRTARIWSMDRIQP 497
N+N LV C + GH+ P V + +N G A S+D ARIW+ +
Sbjct: 210 ENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWT-ENGNL 268
Query: 498 LRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSP 557
+ H + ++W+ NY+ + DKT +WD +GE + F H + L +
Sbjct: 269 ASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQN 328
Query: 558 DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
+ + AS D I + L V GHT+ V + + G LLAS S D T+K+W
Sbjct: 329 NMTF-ASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS 387
Query: 618 VTTSTKVLKTEEKSGTNRLRSLKTLPT 644
+ V + S + ++K PT
Sbjct: 388 MKQDACVHDLQAHS--KEIYTIKWSPT 412
Score = 222 (83.2 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 70/264 (26%), Positives = 120/264 (45%)
Query: 365 LVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPV 424
L+A G DS+ ++W+ L + S+G G R I R+ + + V
Sbjct: 193 LLASGSGDSTARIWN---LNEN--SNG--GSTQLVLRHCI-----REGGHDVPSNKD--V 238
Query: 425 YSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKG-HNYPVWDVQFNPQGHYFASSSH 483
S ++ G + S D R+W+ N NL G H P++ +++N +G+Y S+
Sbjct: 239 TSLDWNSDGTLLAMGSYDGFARIWTE--NGNLASTLGQHKGPIFALKWNKKGNYVLSAGV 296
Query: 484 DRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIF 543
D+T IW + + H + V W N + A+ S+D + + + V+ F
Sbjct: 297 DKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTF-ASCSTDMCIHVCRLGCDHPVKTF 355
Query: 544 IGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS- 602
GH + + ++ P G +AS +D T+ +W + CV L H+ ++T+ +S G
Sbjct: 356 QGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPA 415
Query: 603 --------LLASGSADCTVKLWDV 618
+LAS S D TV+LWDV
Sbjct: 416 TSNPNSSIMLASASFDSTVRLWDV 439
Score = 39 (18.8 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 7 VEF-VATYLKKKGFSEAENALQAEIQRNKSSNNTN 40
V F V YL++ GFS + A I+ + S +N N
Sbjct: 8 VNFLVYRYLQESGFSHS--AFTFGIESHISQSNIN 40
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 274 (101.5 bits), Expect = 6.0e-21, Sum P(2) = 6.0e-21
Identities = 53/182 (29%), Positives = 95/182 (52%)
Query: 436 ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRI 495
+ S +AD +++LWS + + +GH V V ++P G + ++ +DR+ R+W ++
Sbjct: 295 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQ 354
Query: 496 QPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAM 555
+ + GH V + +H + + TG D R+WD+ +G C+ GH I +
Sbjct: 355 EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINF 414
Query: 556 SPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS-CEGSLLASGSADCTVK 614
SP+G ++A+G D T +WDL RCV + H + V + + G+ L +G+ D T K
Sbjct: 415 SPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAK 474
Query: 615 LW 616
+W
Sbjct: 475 IW 476
Score = 270 (100.1 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 56/200 (28%), Positives = 99/200 (49%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V ++ P G F+ ++ D + RLW + ++ +GH+ V+D+ F+ G
Sbjct: 319 EGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSL 378
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
+ D R+W + + + + GHL ++ + + N +IATGS D T ++WD+
Sbjct: 379 AGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQR 438
Query: 538 ECVRIFIGHRSMILSLAMSP-DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
CV H++++ + P G ++ +G D T +W + L GH V L
Sbjct: 439 RCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLD 498
Query: 597 YSCEGSLLASGSADCTVKLW 616
S +G L+A+ S D T KLW
Sbjct: 499 ISSDGQLIATCSYDRTFKLW 518
Score = 264 (98.0 bits), Expect = 8.7e-20, Sum P(2) = 8.7e-20
Identities = 62/209 (29%), Positives = 103/209 (49%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLV-CYKGHNYPVWDVQFNPQGHY 477
G P+ FSP + ++ +LWS + NL+ +GHN V + F+P+
Sbjct: 228 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVP-DCNLLHTLRGHNTNVGAIVFHPKSTV 286
Query: 478 --------FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
AS + D + ++WS+D +P+ + GH V V WH + ++ T D++
Sbjct: 287 SLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSW 346
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
RLWD+ + E + GH + +A DG +G D +WDL +GRC+ L GH
Sbjct: 347 RLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL 406
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLWDV 618
++ + +S G +A+GS D T K+WD+
Sbjct: 407 KEIYGINFSPNGYHIATGSGDNTCKVWDL 435
Score = 181 (68.8 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 44/183 (24%), Positives = 88/183 (48%)
Query: 455 NLVCYK-GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW 513
N C + G + P+ F+P A++ ++WS+ L + GH ++V + +
Sbjct: 221 NNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVF 280
Query: 514 H----INCNY----IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASG 565
H ++ + +A+ ++D +V+LW + S E V GH + + P GR++ +
Sbjct: 281 HPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTT 340
Query: 566 DEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
D + +WDL + + GH+ V+ +A+ +GSL +G D ++WD+ T ++
Sbjct: 341 CYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIM 400
Query: 626 KTE 628
E
Sbjct: 401 FLE 403
Score = 170 (64.9 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 38/122 (31%), Positives = 60/122 (49%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
R +GH +Y +FSP G I + S D T ++W + + H V V+F
Sbjct: 397 RCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKF 456
Query: 472 NP-QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVR 530
P G++ + ++D TA+IW+ PL+ +AGH V + + IAT S D+T +
Sbjct: 457 EPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFK 516
Query: 531 LW 532
LW
Sbjct: 517 LW 518
Score = 45 (20.9 bits), Expect = 6.0e-21, Sum P(2) = 6.0e-21
Identities = 20/86 (23%), Positives = 39/86 (45%)
Query: 222 INQKEVHWGLLEDSLENRLEK--TGLIS-DSEKAEGENKEAEIDENKKRPVE---GGKQG 275
+ + +++G LE+ RL K +GL+ + KA E I + +E +Q
Sbjct: 24 VKKPHIYYGSLEEKERERLAKGESGLLGKEGLKAGIEAGNINITSGEVFEIEEHISERQA 83
Query: 276 ---ASIKKLKKDKAINATAKTSRLEA 298
A ++ K+ + IN + S ++A
Sbjct: 84 EVLAEFERRKRARQINVSTDDSEVKA 109
>UNIPROTKB|F1P8Q5 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:AAEX03015272
ProteinModelPortal:F1P8Q5 Ensembl:ENSCAFT00000023270 Uniprot:F1P8Q5
Length = 340
Score = 255 (94.8 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 58/233 (24%), Positives = 111/233 (47%)
Query: 403 DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGH 462
+++G + TL +GH +Y+ ++ ++S+S D + +W T +
Sbjct: 38 EVVGRVQMRTRRTL-RGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLR 96
Query: 463 NYPVWDVQFNPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSDVDCVRWHINCN 518
+ V + P G++ A D I+S+ ++ R ++ H + C R+ ++ N
Sbjct: 97 SSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRF-LDDN 155
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
I T S D T LWD+ +G+ +F+GH +SLA+SPD + SG D + +WD+
Sbjct: 156 NIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVRE 215
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKS 631
G C GH S + + + G + +GS D + +L+D+ ++ ++S
Sbjct: 216 GTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSDES 268
Score = 223 (83.6 bits), Expect = 8.3e-16, Sum P(2) = 8.3e-16
Identities = 58/201 (28%), Positives = 97/201 (48%)
Query: 420 HSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
H+G + F L D I++SS DTT LW + + GH + +P F
Sbjct: 142 HTGYLSCCRF--LDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLF 199
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
S + D +A++W + + GH SD++ + + N I TGS D + RL+D+ + +
Sbjct: 200 ISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQ 259
Query: 539 CVRIFIGHRSM--ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+ + + I S+A S GR + +G +D +WD G V L GH + V L
Sbjct: 260 ELTAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNIWDSMKGERVGILSGHDNRVSCLG 319
Query: 597 YSCEGSLLASGSADCTVKLWD 617
+ +G +A+GS D +K+W+
Sbjct: 320 VTADGMAVATGSWDSFLKVWN 340
Score = 203 (76.5 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 55/225 (24%), Positives = 107/225 (47%)
Query: 413 SYTLYQGHSGPVYSA-----SFSPLGDFILSSSADTTIRLWSTKLN-ANLVCYK---GHN 463
+YT + H+ P+ S+ +++P G+F+ D ++S K N+ + H
Sbjct: 84 TYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHT 143
Query: 464 YPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY--IA 521
+ +F + +SS D T +W ++ Q + GH D C+ ++ ++
Sbjct: 144 GYLSCCRFLDDNN-IVTSSGDTTCALWDIETGQQKTVFVGHTGD--CMSLAVSPDFKLFI 200
Query: 522 TGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRC 581
+G+ D + +LWDV G C + F GH S I ++ P+G + +G +D + ++DL + +
Sbjct: 201 SGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQE 260
Query: 582 VTPLMGHTS-C-VWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
+T + C + ++A+S G LL +G D +WD +V
Sbjct: 261 LTAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNIWDSMKGERV 305
Score = 131 (51.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 45/203 (22%), Positives = 85/203 (41%)
Query: 348 INTHNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT---TPRED 403
++ H G L+C D ++V D++ +WD+ Q+ V G G+ + +P
Sbjct: 139 LSAHTGYLSCCRFLDDNNIVTSS-GDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFK 197
Query: 404 IIGPNGRKRSYTLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
+ S L+ GH + + F P G+ I + S D + RL+ +
Sbjct: 198 LFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRA 257
Query: 453 NANLVCYKGHNY--PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDC 510
+ L Y + + V F+ G + D IW + + + I++GH + V C
Sbjct: 258 DQELTAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNIWDSMKGERVGILSGHDNRVSC 317
Query: 511 VRWHINCNYIATGSSDKTVRLWD 533
+ + +ATGS D +++W+
Sbjct: 318 LGVTADGMAVATGSWDSFLKVWN 340
Score = 37 (18.1 bits), Expect = 8.3e-16, Sum P(2) = 8.3e-16
Identities = 7/18 (38%), Positives = 8/18 (44%)
Query: 362 DGSLVAGGFSDSSLKVWD 379
D L+ D L VWD
Sbjct: 66 DSKLLVSASQDGKLIVWD 83
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 255 (94.8 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 61/208 (29%), Positives = 97/208 (46%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWST---KLNANLVCYKGHNYPVWDVQFNPQG 475
GH V+S ++SP G + S D TIR+W K + GH + + ++P G
Sbjct: 3 GHEDRVWSVAWSPNGFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGWSPCG 62
Query: 476 HYFASSSHDRTARIWSMD--RIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
+ AS+S D T IW + + GH ++V V W ++ + +AT DK+V +W+
Sbjct: 63 TFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGSLLATCGRDKSVWIWE 122
Query: 534 VSSG---ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW--DLASGRCVTPLMGH 588
V EC + H + + P +AS D TI ++ D C L GH
Sbjct: 123 VQEDDEYECASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKLYKEDEDDWSCCDTLEGH 182
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLW 616
S VW++++ G + S S D TV++W
Sbjct: 183 ESTVWSISFDGSGDRIVSCSDDKTVRIW 210
Score = 197 (74.4 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 59/209 (28%), Positives = 90/209 (43%)
Query: 376 KVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKR--SYTLYQGHSGPVYSASFSPLG 433
+VW +A V + G D T R I G G K L GH + S +SP G
Sbjct: 7 RVWSVAWSPNGFVLASCGG--DKTIR--IWGKEGDKWICKTILEDGHQRTIRSLGWSPCG 62
Query: 434 DFILSSSADTTIRLWSTKLNANLVC---YKGHNYPVWDVQFNPQGHYFASSSHDRTARIW 490
F+ S+S D T +W K + C +GH V V ++ G A+ D++ IW
Sbjct: 63 TFLASASFDATTCIWDQK-SGEFECNATLEGHENEVKSVDWSVSGSLLATCGRDKSVWIW 121
Query: 491 SM---DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLW--DVSSGECVRIFIG 545
+ D + ++ H DV V WH +A+ S D T++L+ D C G
Sbjct: 122 EVQEDDEYECASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKLYKEDEDDWSCCDTLEG 181
Query: 546 HRSMILSLAMSPDGRYMASGDEDGTIMMW 574
H S + S++ G + S +D T+ +W
Sbjct: 182 HESTVWSISFDGSGDRIVSCSDDKTVRIW 210
Score = 181 (68.8 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 46/123 (37%), Positives = 63/123 (51%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE--CVRIFI-GHRSMILSLAMSP 557
M GH V V W N +A+ DKT+R+W + C I GH+ I SL SP
Sbjct: 1 MTGHEDRVWSVAWSPNGFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGWSP 60
Query: 558 DGRYMASGDEDGTIMMWDLASGR--CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKL 615
G ++AS D T +WD SG C L GH + V ++ +S GSLLA+ D +V +
Sbjct: 61 CGTFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGSLLATCGRDKSVWI 120
Query: 616 WDV 618
W+V
Sbjct: 121 WEV 123
Score = 129 (50.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 71/287 (24%), Positives = 117/287 (40%)
Query: 363 GSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQG-EN-----DTTPREDIIGPNGRKRSYTL 416
G+ +A D++ +WD K G+ ++ L+G EN D + ++ GR +S +
Sbjct: 62 GTFLASASFDATTCIWDQ-KSGEFECNATLEGHENEVKSVDWSVSGSLLATCGRDKSVWI 120
Query: 417 YQ--------------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVC--YK 460
++ H+ V + P + + S S D TI+L+ + C +
Sbjct: 121 WEVQEDDEYECASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKLYKEDEDDWSCCDTLE 180
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH VW + F+ G S S D+T RIW + P G + +W C +
Sbjct: 181 GHESTVWSISFDGSGDRIVSCSDDKTVRIW---KSYPPGNQEGVVVSGKHTKWKCVC--V 235
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
+G D+T+ +DV H S + L + ASGD+ I D S R
Sbjct: 236 LSGYHDRTI--YDV-----------HWSKVSGLIAT------ASGDDCIRIFKEDTNSDR 276
Query: 581 -------CVTPLMGHTSCVWTLAYSCEG-SLLASGSADCTVKLWDVT 619
T H+ V ++ + + ++LA+ S D TVKLW T
Sbjct: 277 NQPSFQLVATQRKAHSMDVNSICWHPKDENILATCSDDGTVKLWRFT 323
>UNIPROTKB|F1SLU8 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:FP325257
Ensembl:ENSSSCT00000000743 Uniprot:F1SLU8
Length = 340
Score = 255 (94.8 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 63/243 (25%), Positives = 113/243 (46%)
Query: 397 DTTPREDIIGPN--GR--KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
DTT E + G GR R+ +GH +Y+ ++ ++S+S D + +W T
Sbjct: 27 DTTLAELVSGLEVVGRVQMRTRRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYT 86
Query: 453 NANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSDV 508
+ + V + P G++ A D I+S+ ++ R ++ H +
Sbjct: 87 TNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYL 146
Query: 509 DCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDED 568
C R+ ++ N I T S D T LWD+ +G+ +F+GH +SLA+SPD + SG D
Sbjct: 147 SCCRF-LDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACD 205
Query: 569 GTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTE 628
+ +WD+ G C GH S + + + G + +GS D + +L+D+ ++
Sbjct: 206 ASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTTYS 265
Query: 629 EKS 631
+S
Sbjct: 266 HES 268
Score = 224 (83.9 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 59/202 (29%), Positives = 98/202 (48%)
Query: 420 HSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
H+G + F L D I++SS DTT LW + + GH + +P F
Sbjct: 142 HTGYLSCCRF--LDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLF 199
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
S + D +A++W + + GH SD++ + + N I TGS D + RL+D+ + +
Sbjct: 200 ISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQ 259
Query: 539 CVRIFIGHRSMIL---SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTL 595
+ + H S+I S+A S GR + +G +D +WD V L GH + V L
Sbjct: 260 ELTTY-SHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMKCERVGTLSGHDNRVSCL 318
Query: 596 AYSCEGSLLASGSADCTVKLWD 617
+ +G +A+GS D +K+W+
Sbjct: 319 GVTADGMAVATGSWDSFLKIWN 340
Score = 127 (49.8 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 43/203 (21%), Positives = 84/203 (41%)
Query: 348 INTHNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT---TPRED 403
++ H G L+C D ++V D++ +WD+ Q+ V G G+ + +P
Sbjct: 139 LSAHTGYLSCCRFLDDNNIVTSS-GDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFK 197
Query: 404 IIGPNGRKRSYTLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
+ S L+ GH + + F P G+ I + S D + RL+ +
Sbjct: 198 LFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRA 257
Query: 453 NANLVCYKGHNY--PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDC 510
+ L Y + + V F+ G + D +W + + + ++GH + V C
Sbjct: 258 DQELTTYSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMKCERVGTLSGHDNRVSC 317
Query: 511 VRWHINCNYIATGSSDKTVRLWD 533
+ + +ATGS D +++W+
Sbjct: 318 LGVTADGMAVATGSWDSFLKIWN 340
Score = 37 (18.1 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 7/18 (38%), Positives = 8/18 (44%)
Query: 362 DGSLVAGGFSDSSLKVWD 379
D L+ D L VWD
Sbjct: 66 DSKLLVSASQDGKLIVWD 83
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 275 (101.9 bits), Expect = 6.7e-21, P = 6.7e-21
Identities = 61/212 (28%), Positives = 109/212 (51%)
Query: 414 YTLYQGHSGPVYSASFSPLG-------DFILSS-SADTTIRLWSTKLNANLVCYKGHNYP 465
+TL +GHS V + F P D L+S +AD +++LWS + + + +GH+
Sbjct: 266 HTL-RGHSTNVGAIVFHPKATVSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMR 324
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
V V ++P G + ++ +D + R+W ++ + + GH V + +H + + TG
Sbjct: 325 VARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGL 384
Query: 526 DKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPL 585
D R+WD+ +G C+ GH I L SP+G ++A+G D T +WDL +C+ +
Sbjct: 385 DAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTI 444
Query: 586 MGHTSCVWTLAYSCE-GSLLASGSADCTVKLW 616
H + V + + G+ L +G+ D T K+W
Sbjct: 445 PAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIW 476
Score = 268 (99.4 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 55/200 (27%), Positives = 100/200 (50%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GHS V + P G F+ ++ D + RLW + ++ +GH+ V+D+ F+ G
Sbjct: 319 EGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSL 378
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
+ D R+W + + + + GHL ++ + + N ++ATGS D T ++WD+
Sbjct: 379 AGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQR 438
Query: 538 ECVRIFIGHRSMILSLAMSPD-GRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+C+ H++++ + P+ G ++ +G D T +W + L GH V L
Sbjct: 439 KCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLD 498
Query: 597 YSCEGSLLASGSADCTVKLW 616
S +G L+A+ S D T KLW
Sbjct: 499 ISLDGQLIATCSYDRTFKLW 518
Score = 255 (94.8 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 62/209 (29%), Positives = 102/209 (48%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLV-CYKGHNYPVWDVQFNPQGHY 477
G P+ FSP + ++ +LWS + NLV +GH+ V + F+P+
Sbjct: 228 GDDRPLSYCHFSPNSKLLATACWSGLCKLWSVP-DCNLVHTLRGHSTNVGAIVFHPKATV 286
Query: 478 --------FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
AS + D + ++WS++ +P+ + GH V V WH + ++ T D +
Sbjct: 287 SLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSW 346
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
RLWD+ + E + GH + +A DG +G D +WDL +GRC+ L GH
Sbjct: 347 RLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL 406
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLWDV 618
++ L +S G +A+GS D T K+WD+
Sbjct: 407 KEIYGLNFSPNGYHVATGSGDNTCKVWDL 435
Score = 180 (68.4 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 43/183 (23%), Positives = 85/183 (46%)
Query: 455 NLVCYK-GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW 513
N C + G + P+ F+P A++ ++WS+ + + GH ++V + +
Sbjct: 221 NNFCSQIGDDRPLSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVF 280
Query: 514 HINCNY--------IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASG 565
H +A+ ++D +V+LW + S E V GH + + P GR++ +
Sbjct: 281 HPKATVSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTT 340
Query: 566 DEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
D + +WDL + + GH+ V+ +A+ +GSL +G D ++WD+ T ++
Sbjct: 341 CYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIM 400
Query: 626 KTE 628
E
Sbjct: 401 FLE 403
Score = 174 (66.3 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 37/122 (30%), Positives = 61/122 (50%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
R +GH +Y +FSP G + + S D T ++W + + H V V+F
Sbjct: 397 RCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKF 456
Query: 472 NPQ-GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVR 530
P G++ + ++D TA+IW+ PL+ +AGH V + ++ IAT S D+T +
Sbjct: 457 EPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFK 516
Query: 531 LW 532
LW
Sbjct: 517 LW 518
>UNIPROTKB|F1NLV4 [details] [associations]
symbol:GNB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001750 "photoreceptor outer segment" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0005834 GeneTree:ENSGT00550000074331
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:AADN02040871
IPI:IPI00596111 Ensembl:ENSGALT00000002040
Ensembl:ENSGALT00000040376 Uniprot:F1NLV4
Length = 403
Score = 269 (99.8 bits), Expect = 7.6e-21, P = 7.6e-21
Identities = 61/227 (26%), Positives = 108/227 (47%)
Query: 405 IGPNGR--KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGH 462
I P GR R+ +GH +Y+ + ++S+S D + +W + +
Sbjct: 37 IDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLR 96
Query: 463 NYPVWDVQFNPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSDVDCVRWHINCN 518
+ V + P G+Y A D I+++ ++ R +AGH + C R+ ++ N
Sbjct: 97 SSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF-LDDN 155
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
I T S D T LWD+ +G+ F GH ++SL+++PD R SG D + +WD+
Sbjct: 156 QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDARCFVSGACDASAKLWDVRE 215
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
G C GH S + + + G+ A+GS D T +L+D+ +++
Sbjct: 216 GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Score = 213 (80.0 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 55/187 (29%), Positives = 89/187 (47%)
Query: 419 GHSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH+G + F L D I++SS DTT LW + + GH V + P
Sbjct: 141 GHTGYLSCCRF--LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDARC 198
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
F S + D +A++W + + GH SD++ + + N N ATGS D T RL+D+ +
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD 258
Query: 538 ECVRIFIGHRSMIL---SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ + ++ H ++I S+A S GR + +G +D +WD L GH + V
Sbjct: 259 QELMVY-SHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSC 317
Query: 595 LAYSCEG 601
L + +G
Sbjct: 318 LGVTDDG 324
Score = 206 (77.6 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 56/217 (25%), Positives = 100/217 (46%)
Query: 413 SYTLYQGHSGPVYSA-----SFSPLGDFILSSSADTTIRLWSTKLNANLVCYK----GHN 463
SYT + H+ P+ S+ +++P G+++ D +++ K V GH
Sbjct: 84 SYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHT 143
Query: 464 YPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATG 523
+ +F +SS D T +W ++ Q GH DV + + +G
Sbjct: 144 GYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDARCFVSG 202
Query: 524 SSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVT 583
+ D + +LWDV G C + F GH S I ++ P+G A+G +D T ++DL + + +
Sbjct: 203 ACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Query: 584 PLMGHTS--C-VWTLAYSCEGSLLASGSADCTVKLWD 617
+ H + C + ++A+S G LL +G D +WD
Sbjct: 263 -VYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWD 298
Score = 153 (58.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 35/147 (23%), Positives = 65/147 (44%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQ 474
T + GH+G V S S +P +S + D + +LW + + GH + + F P
Sbjct: 178 TTFTGHTGDVMSLSLAPDARCFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPN 237
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGH--LSDVDCVRWHINCNYIATGSSDKTVRLW 532
G+ FA+ S D T R++ + Q L + + + + V + + + G D +W
Sbjct: 238 GNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVW 297
Query: 533 DVSSGECVRIFIGHRSMILSLAMSPDG 559
D + + GH + + L ++ DG
Sbjct: 298 DTLKADRAGVLAGHDNRVSCLGVTDDG 324
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 277 (102.6 bits), Expect = 7.8e-21, P = 7.8e-21
Identities = 62/216 (28%), Positives = 111/216 (51%)
Query: 420 HSGPVYSASFSP-LGDFILSSSADTTIRLWST-KLNANLVCYKGHNYPVWDVQFNPQGHY 477
HS V S G + + D + +WS +L +L+ GH P+ +Q + +
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVAQLRHDLLT--GHTTPIESLQISAKEEL 76
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
+ S + R+W ++ + LR + GH +++ + +H +++A+GS D ++LWDV
Sbjct: 77 IVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRK 136
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY 597
C+ + H + L SPDG+++AS +D T+ +WDL +G+ + GH V + +
Sbjct: 137 GCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEF 196
Query: 598 --SCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKS 631
S E LLASGS+ T++ WD+ V EE++
Sbjct: 197 HPSIE-YLLASGSSSMTIRFWDLEKFHVVSCIEEEA 231
Score = 262 (97.3 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 75/296 (25%), Positives = 128/296 (43%)
Query: 363 GSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQG-EN-DTTPREDIIGPNGRKRSYTLYQ-- 418
G L+A G D + VW +A+L ++ E+ + +E++I + S ++
Sbjct: 33 GRLLATGGDDCRVNVWSVAQLRHDLLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE 92
Query: 419 ---------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
GH + S F P G F+ S S DT I+LW + + YK H V +
Sbjct: 93 AAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCL 152
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI-ATGSSDKT 528
+F+P G + AS++ D T ++W + + + GH V+ V +H + Y+ A+GSS T
Sbjct: 153 RFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMT 212
Query: 529 VRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
+R WD+ V + + + +PDG + G +D ++ ++ RC ++ +
Sbjct: 213 IRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD-SLRVYGWEPERCFDVVVVN 271
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPT 644
V L+ C L+ A TV + V S G R L PT
Sbjct: 272 WGKVADLSV-CHNQLIGVSFAQSTVSSFVVDLSRVTKSGSVPHGLLRNNELLAQPT 326
Score = 144 (55.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 55/218 (25%), Positives = 93/218 (42%)
Query: 359 ISQDGSLVAGGFSDSSLKVWDM--AK-----LGQQAVSSGLQ----------GENDTTPR 401
IS L+ G S++VWD+ AK LG +A L G DT
Sbjct: 70 ISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDT--- 126
Query: 402 EDI-IGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
DI + RK Y+ H+ V FSP G ++ S++ D T++LW + +
Sbjct: 127 -DIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFT 185
Query: 461 GHNYPVWDVQFNPQGHYF-ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN--C 517
GH PV V+F+P Y AS S T R W +++ + + + V C+ ++ + C
Sbjct: 186 GHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCC 245
Query: 518 NYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAM 555
Y G ++R++ C + + + + L++
Sbjct: 246 LY---GGFQDSLRVYGWEPERCFDVVVVNWGKVADLSV 280
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 277 (102.6 bits), Expect = 7.9e-21, P = 7.9e-21
Identities = 88/327 (26%), Positives = 151/327 (46%)
Query: 353 GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRK- 411
G+ C + D + G D+++K+WD + SG G ++ + +G
Sbjct: 224 GVYC--LQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRVIISGSSD 281
Query: 412 ---RSYTLYQG--------HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
R + + G H V F+ +++ S D +I +W ++ +
Sbjct: 282 ATVRVWDVETGECIKTLIHHCEAVLHLRFA--NGIMVTCSKDRSIAVWDMVSPRDITIRR 339
Query: 461 ---GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINC 517
GH V V F+ + Y S+S DRT ++WSMD ++ +R +AGH + C+++
Sbjct: 340 VLVGHRAAVNVVDFDDR--YIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR--G 395
Query: 518 NYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL- 576
+ +GSSD T+RLWD+ SG C+R+ GH ++ + D + + SG DG I +WDL
Sbjct: 396 RLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRF--DEKRIVSGAYDGKIKVWDLQ 453
Query: 577 --------ASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTE 628
+S C+ L+ HT V+ L + + + S S D T+ +WD + +
Sbjct: 454 AALDPRALSSEICLCSLVQHTGRVFRLQF--DDFQIVSSSHDDTILIWDFLDAPP---SG 508
Query: 629 EKSGTNRLRSLKTLPTKSTPVYSLQVL 655
S TNR +L LP ++ V Q+L
Sbjct: 509 LPSSTNRA-TLPELPNQAA-VARAQML 533
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 277 (102.6 bits), Expect = 7.9e-21, P = 7.9e-21
Identities = 88/327 (26%), Positives = 151/327 (46%)
Query: 353 GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRK- 411
G+ C + D + G D+++K+WD + SG G ++ + +G
Sbjct: 224 GVYC--LQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRVIISGSSD 281
Query: 412 ---RSYTLYQG--------HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
R + + G H V F+ +++ S D +I +W ++ +
Sbjct: 282 ATVRVWDVETGECIKTLIHHCEAVLHLRFA--NGIMVTCSKDRSIAVWDMVSPRDITIRR 339
Query: 461 ---GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINC 517
GH V V F+ + Y S+S DRT ++WSMD ++ +R +AGH + C+++
Sbjct: 340 VLVGHRAAVNVVDFDDR--YIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR--G 395
Query: 518 NYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL- 576
+ +GSSD T+RLWD+ SG C+R+ GH ++ + D + + SG DG I +WDL
Sbjct: 396 RLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRF--DEKRIVSGAYDGKIKVWDLQ 453
Query: 577 --------ASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTE 628
+S C+ L+ HT V+ L + + + S S D T+ +WD + +
Sbjct: 454 AALDPRALSSEICLCSLVQHTGRVFRLQF--DDFQIVSSSHDDTILIWDFLDAPP---SG 508
Query: 629 EKSGTNRLRSLKTLPTKSTPVYSLQVL 655
S TNR +L LP ++ V Q+L
Sbjct: 509 LPSSTNRA-TLPELPNQAA-VARAQML 533
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 254 (94.5 bits), Expect = 8.4e-21, P = 8.4e-21
Identities = 88/298 (29%), Positives = 133/298 (44%)
Query: 351 HNGLNCASISQ-DGS-LVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPN 408
HN + A + D S + D SL VWD+ Q V G P
Sbjct: 17 HNDVVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQN-VGEGAGASEYGVPF------- 68
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
R T GHS V S G F LS S D +RLW + GH+ V
Sbjct: 69 ---RRLT---GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLS 122
Query: 469 VQFNPQGHYFASSSHDRTARIWS-MDRIQ-----PLRIMAGHLSDVDCVRWHINCNY--I 520
V F+ S+S DRT ++W+ + + L GH V CVR+ N I
Sbjct: 123 VAFSVDNRQIVSASRDRTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTI 182
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
+GS D+TV++W++++ + GH + ++A+SPDG ASG +DG ++WDLA G+
Sbjct: 183 VSGSWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGK 242
Query: 581 CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV--LKTEEKSGTNRL 636
+ L S + +L +S L + + D ++K+WD+ + V LK E N++
Sbjct: 243 RLYSLDAG-SIIHSLCFSPNRYWLCAATQD-SIKIWDLESKHIVQDLKPEIPVSKNQM 298
Score = 209 (78.6 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 93/343 (27%), Positives = 158/343 (46%)
Query: 299 NTVSTAPRVKPDLALPVMPTEVEQSILE-DLRNRV-HLSSAALPS---VSFYTFINTHNG 353
N V TA D + ++ + ++S+L DL N V ++ A S V F +
Sbjct: 18 NDVVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVPFRRLTGHSHF 77
Query: 354 LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRS 413
+ +S DG G D L++WD+ S+G+ TT R
Sbjct: 78 VQDVVLSSDGQFALSGSWDGELRLWDL--------STGV-----TTRR------------ 112
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWST------KLNANLVCYKGHNYPVW 467
+ GH V S +FS I+S+S D TI+LW+T + +L +GHN V
Sbjct: 113 ---FVGHDKDVLSVAFSVDNRQIVSASRDRTIKLWNTLGECKYTIGGDLGGGEGHNGWVS 169
Query: 468 DVQFNPQGHY--FASSSHDRTARIWSMDRIQPLRI-MAGHLSDVDCVRWHINCNYIATGS 524
V+F+P S S DRT ++W++ + LR + GH V+ V + + A+G
Sbjct: 170 CVRFSPNTFQPTIVSGSWDRTVKVWNLTNCK-LRCNLEGHGGYVNAVAVSPDGSLCASGG 228
Query: 525 SDKTVRLWDVSSGECVRIF-IGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVT 583
D LWD++ G+ R++ + S+I SL SP+ ++ + +D +I +WDL S V
Sbjct: 229 KDGVTLLWDLAEGK--RLYSLDAGSIIHSLCFSPNRYWLCAATQD-SIKIWDLESKHIVQ 285
Query: 584 PL-----MGHTSCVW--TLAYSCEGSLLASGSADCTVKLWDVT 619
L + ++ +L +S +GS L +G D T++++ ++
Sbjct: 286 DLKPEIPVSKNQMLYCTSLNWSADGSTLYAGYTDGTIRIYKIS 328
Score = 173 (66.0 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 56/184 (30%), Positives = 83/184 (45%)
Query: 461 GHNYPVWDVQFNP--QGHYFASSSHDRTARIWSMDR-IQ-------------PLRIMAGH 504
GHN V + P + SSS D++ +W + +Q P R + GH
Sbjct: 16 GHNDVVTAIA-TPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVPFRRLTGH 74
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
V V + + +GS D +RLWD+S+G R F+GH +LS+A S D R + S
Sbjct: 75 SHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNRQIVS 134
Query: 565 GDEDGTIMMWDLASGRCVTPL-------MGHTSCVWTLAYSCEG--SLLASGSADCTVKL 615
D TI +W+ G C + GH V + +S + SGS D TVK+
Sbjct: 135 ASRDRTIKLWNTL-GECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSGSWDRTVKV 193
Query: 616 WDVT 619
W++T
Sbjct: 194 WNLT 197
Score = 165 (63.1 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 41/139 (29%), Positives = 68/139 (48%)
Query: 500 IMAGHLSDVDCVRWHI-NCNYIATGSSDKTVRLWDVSS-----GECV---------RIFI 544
+M GH V + I N +I + S DK++ +WD+++ GE R
Sbjct: 13 VMHGHNDVVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVPFRRLT 72
Query: 545 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLL 604
GH + + +S DG++ SG DG + +WDL++G +GH V ++A+S + +
Sbjct: 73 GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNRQI 132
Query: 605 ASGSADCTVKLWDVTTSTK 623
S S D T+KLW+ K
Sbjct: 133 VSASRDRTIKLWNTLGECK 151
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 275 (101.9 bits), Expect = 9.1e-21, Sum P(2) = 9.1e-21
Identities = 53/182 (29%), Positives = 95/182 (52%)
Query: 436 ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRI 495
+ S +AD +++LWS + + +GH V V ++P G + ++ +DR+ R+W ++
Sbjct: 311 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ 370
Query: 496 QPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAM 555
+ + GH V + +H + + TG D R+WD+ +G C+ GH I +
Sbjct: 371 EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINF 430
Query: 556 SPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS-CEGSLLASGSADCTVK 614
SP+G ++A+G D T +WDL RCV + H + V + + G+ L +G+ D T K
Sbjct: 431 SPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAK 490
Query: 615 LW 616
+W
Sbjct: 491 IW 492
Score = 268 (99.4 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
Identities = 56/200 (28%), Positives = 98/200 (49%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V + P G F+ ++ D + RLW + ++ +GH+ V+D+ F+ G
Sbjct: 335 EGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSL 394
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
+ D R+W + + + + GHL ++ + + N +IATGS D T ++WD+
Sbjct: 395 AGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQR 454
Query: 538 ECVRIFIGHRSMILSLAMSP-DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
CV H++++ + P G ++ +G D T +W + L GH V L
Sbjct: 455 RCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLD 514
Query: 597 YSCEGSLLASGSADCTVKLW 616
S +G L+A+ S D T KLW
Sbjct: 515 ISSDGQLIATCSYDRTFKLW 534
Score = 264 (98.0 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 62/209 (29%), Positives = 103/209 (49%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLV-CYKGHNYPVWDVQFNPQGHY 477
G P+ FSP + ++ +LWS + NL+ +GHN V + F+P+
Sbjct: 244 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVP-DCNLLHTLRGHNTNVGAIVFHPKSTV 302
Query: 478 --------FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
AS + D + ++WS+D +P+ + GH V V WH + ++ T D++
Sbjct: 303 SLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSW 362
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
RLWD+ + E + GH + +A DG +G D +WDL +GRC+ L GH
Sbjct: 363 RLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL 422
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLWDV 618
++ + +S G +A+GS D T K+WD+
Sbjct: 423 KEIYGINFSPNGYHIATGSGDNTCKVWDL 451
Score = 180 (68.4 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 44/183 (24%), Positives = 88/183 (48%)
Query: 455 NLVCYK-GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW 513
N C + G + P+ F+P A++ ++WS+ L + GH ++V + +
Sbjct: 237 NNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVF 296
Query: 514 H----INCNY----IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASG 565
H ++ + +A+ ++D +V+LW + S E V GH + + P GR++ +
Sbjct: 297 HPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTT 356
Query: 566 DEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
D + +WDL + + GH+ V+ +A+ +GSL +G D ++WD+ T ++
Sbjct: 357 CYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIM 416
Query: 626 KTE 628
E
Sbjct: 417 FLE 419
Score = 170 (64.9 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 38/122 (31%), Positives = 60/122 (49%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
R +GH +Y +FSP G I + S D T ++W + + H V V+F
Sbjct: 413 RCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKF 472
Query: 472 NP-QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVR 530
P G++ + ++D TA+IW+ PL+ +AGH V + + IAT S D+T +
Sbjct: 473 EPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFK 532
Query: 531 LW 532
LW
Sbjct: 533 LW 534
Score = 43 (20.2 bits), Expect = 9.1e-21, Sum P(2) = 9.1e-21
Identities = 19/86 (22%), Positives = 39/86 (45%)
Query: 222 INQKEVHWGLLEDSLENRLEK--TGLIS-DSEKAEGENKEAEIDENKKRPVE---GGKQG 275
+ + +++G LE+ RL K +G++ + KA E I + +E +Q
Sbjct: 40 VKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEEHISERQA 99
Query: 276 ---ASIKKLKKDKAINATAKTSRLEA 298
A ++ K+ + IN + S ++A
Sbjct: 100 EVLAEFERRKRARQINVSTDDSEVKA 125
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 274 (101.5 bits), Expect = 9.7e-21, Sum P(2) = 9.7e-21
Identities = 53/182 (29%), Positives = 94/182 (51%)
Query: 436 ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRI 495
+ S +AD +++LWS + + +GH V V ++P G + ++ +DR+ R+W ++
Sbjct: 295 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ 354
Query: 496 QPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAM 555
+ + GH V + +H + + TG D R+WD+ +G C+ GH I +
Sbjct: 355 EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINF 414
Query: 556 SPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS-CEGSLLASGSADCTVK 614
SP+G ++A+G D T +WDL RCV + H + V + + G L +G+ D T K
Sbjct: 415 SPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAK 474
Query: 615 LW 616
+W
Sbjct: 475 IW 476
Score = 266 (98.7 bits), Expect = 8.2e-20, Sum P(2) = 8.2e-20
Identities = 56/200 (28%), Positives = 98/200 (49%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V + P G F+ ++ D + RLW + ++ +GH+ V+D+ F+ G
Sbjct: 319 EGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSL 378
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
+ D R+W + + + + GHL ++ + + N +IATGS D T ++WD+
Sbjct: 379 AGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQR 438
Query: 538 ECVRIFIGHRSMILSLAMSP-DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
CV H++++ + P G ++ +G D T +W + L GH V L
Sbjct: 439 RCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLD 498
Query: 597 YSCEGSLLASGSADCTVKLW 616
S +G L+A+ S D T KLW
Sbjct: 499 ISSDGQLIATCSYDRTFKLW 518
Score = 262 (97.3 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 61/208 (29%), Positives = 101/208 (48%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY- 477
G P+ FSP + ++ +LWS + L +GHN V + F+P+
Sbjct: 228 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVS 287
Query: 478 -------FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVR 530
AS + D + ++WS+D +P+ + GH V V WH + ++ T D++ R
Sbjct: 288 LDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWR 347
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
LWD+ + E + GH + +A DG +G D +WDL +GRC+ L GH
Sbjct: 348 LWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLK 407
Query: 591 CVWTLAYSCEGSLLASGSADCTVKLWDV 618
++ + +S G +A+GS D T K+WD+
Sbjct: 408 EIYGINFSPNGYHIATGSGDNTCKVWDL 435
Score = 180 (68.4 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 44/183 (24%), Positives = 88/183 (48%)
Query: 455 NLVCYK-GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW 513
N C + G + P+ F+P A++ ++WS+ L + GH ++V + +
Sbjct: 221 NNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVF 280
Query: 514 H----INCNY----IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASG 565
H ++ + +A+ ++D +V+LW + S E V GH + + P GR++ +
Sbjct: 281 HPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTT 340
Query: 566 DEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
D + +WDL + + GH+ V+ +A+ +GSL +G D ++WD+ T ++
Sbjct: 341 CYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIM 400
Query: 626 KTE 628
E
Sbjct: 401 FLE 403
Score = 168 (64.2 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 38/122 (31%), Positives = 59/122 (48%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
R +GH +Y +FSP G I + S D T ++W + + H V V+F
Sbjct: 397 RCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKF 456
Query: 472 NP-QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVR 530
P G + + ++D TA+IW+ PL+ +AGH V + + IAT S D+T +
Sbjct: 457 EPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFK 516
Query: 531 LW 532
LW
Sbjct: 517 LW 518
Score = 43 (20.2 bits), Expect = 9.7e-21, Sum P(2) = 9.7e-21
Identities = 19/86 (22%), Positives = 39/86 (45%)
Query: 222 INQKEVHWGLLEDSLENRLEK--TGLIS-DSEKAEGENKEAEIDENKKRPVE---GGKQG 275
+ + +++G LE+ RL K +G++ + KA E I + +E +Q
Sbjct: 24 VKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEEHISERQA 83
Query: 276 ---ASIKKLKKDKAINATAKTSRLEA 298
A ++ K+ + IN + S ++A
Sbjct: 84 EVLAEFERRKRARQINVSTDDSEVKA 109
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 278 (102.9 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 60/208 (28%), Positives = 105/208 (50%)
Query: 438 SSSADTTIRLWSTKLNANLVCYKGHN-YPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQ 496
S D ++LW ++ GH + V V F+P G + A++ +D + R+W +++
Sbjct: 327 SGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQKT 386
Query: 497 PLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMS 556
+ GH V C+ +H + + + TG D R+WD+ +G C+ GH + + S
Sbjct: 387 EVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFS 446
Query: 557 PDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCE-GSLLASGSADCTVKL 615
P+G ++A+G +D T +WDL + V + HT+ + + Y E GS L + S D T K+
Sbjct: 447 PNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKI 506
Query: 616 WDVTTSTKVLKTEEKSGTNRLRSLKTLP 643
W T + LKT + N++ S+ P
Sbjct: 507 WSNKT-WQPLKTLQ-GHDNKVISVDIAP 532
Score = 240 (89.5 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 63/208 (30%), Positives = 98/208 (47%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNP----- 473
G + PV SA+FS +L+SS +LWS +GH V V P
Sbjct: 259 GDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKAD 318
Query: 474 QGHY--FASSSHDRTARIWSMDRIQPLRIMAGHLSD-VDCVRWHINCNYIATGSSDKTVR 530
+ + AS HD ++W + + + + GH+ V V +H + ++AT D + R
Sbjct: 319 EENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWR 378
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
LWD+ V GH + L+ DG + +G D +WDL +GRC+ L GH
Sbjct: 379 LWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLG 438
Query: 591 CVWTLAYSCEGSLLASGSADCTVKLWDV 618
V+ + +S G +A+GS D T K+WD+
Sbjct: 439 AVFGVDFSPNGFHIATGSQDNTCKIWDL 466
Score = 235 (87.8 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 44/166 (26%), Positives = 91/166 (54%)
Query: 411 KRSYTLYQ-GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
+++ L+Q GH+ PV+ S+ G +++ D R+W + ++ +GH V+ V
Sbjct: 384 QKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGV 443
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINC-NYIATGSSDKT 528
F+P G + A+ S D T +IW + R QP+ + H + + V++ C +++ T S D T
Sbjct: 444 DFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDST 503
Query: 529 VRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
++W + + ++ GH + ++S+ ++P+ +Y+A+ D T +W
Sbjct: 504 TKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLW 549
Score = 215 (80.7 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 50/194 (25%), Positives = 92/194 (47%)
Query: 424 VYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSH 483
V +F P G F+ ++ D++ RLW + ++ +GH PV + ++ G +
Sbjct: 356 VSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGL 415
Query: 484 DRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIF 543
D R+W + + + + GHL V V + N +IATGS D T ++WD+ + V
Sbjct: 416 DAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTI 475
Query: 544 IGHRSMILSLAMSPD-GRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS 602
H ++I + + G ++ + D T +W + + + L GH + V ++ +
Sbjct: 476 PAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQ 535
Query: 603 LLASGSADCTVKLW 616
+A+ S D T KLW
Sbjct: 536 YIATTSFDRTFKLW 549
Score = 193 (73.0 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 42/126 (33%), Positives = 62/126 (49%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
R +GH G V+ FSP G I + S D T ++W + + H + DV++
Sbjct: 428 RCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKY 487
Query: 472 NPQ-GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVR 530
+ G + + S+D T +IWS QPL+ + GH + V V N YIAT S D+T +
Sbjct: 488 QQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFK 547
Query: 531 LWDVSS 536
LW S
Sbjct: 548 LWSPDS 553
Score = 179 (68.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 52/187 (27%), Positives = 83/187 (44%)
Query: 454 ANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCV-- 511
A L G PV F+ +SS ++WS+ + + + GH S V V
Sbjct: 252 APLCSQVGDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVAL 311
Query: 512 RWHINC---NYIA--TGSSDKTVRLWDVSSGECVRIFIGHRSMILS-LAMSPDGRYMASG 565
R + N +A +G D V+LW ++ E + GH +S +A P GR++A+
Sbjct: 312 RPGVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATA 371
Query: 566 DEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
D + +WDL V GH V L+Y +GS+L +G D ++WD+ T ++
Sbjct: 372 CYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIM 431
Query: 626 KTEEKSG 632
E G
Sbjct: 432 FLEGHLG 438
Score = 141 (54.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 47/157 (29%), Positives = 71/157 (45%)
Query: 354 LNCASISQDGS-LVAGGFSDSSLKVWDM----------AKLGQQ-AVSSGLQGENDTTPR 401
++C S DGS LV GG D+ +VWD+ LG V G + T
Sbjct: 398 VHCLSYHSDGSVLVTGGL-DAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGS 456
Query: 402 ED----IIGPNGRKRSYTLYQGHSGPVYSASFSP-LGDFILSSSADTTIRLWSTKLNANL 456
+D I R+ YT+ H+ + + G F+++ S D+T ++WS K L
Sbjct: 457 QDNTCKIWDLRRRQPVYTI-PAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPL 515
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMD 493
+GH+ V V P Y A++S DRT ++WS D
Sbjct: 516 KTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLWSPD 552
Score = 131 (51.2 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 37/145 (25%), Positives = 61/145 (42%)
Query: 492 MDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMIL 551
+ + PL G V + + + + T S +LW V E + GH S +
Sbjct: 248 LQSLAPLCSQVGDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVG 307
Query: 552 SLAMSPDGRY-------MASGDEDGTIMMWDLASGRCVTPLMGHTSC-VWTLAYSCEGSL 603
+A+ P + MASG DG + +W + + + GH V +A+ G
Sbjct: 308 GVALRPGVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRF 367
Query: 604 LASGSADCTVKLWDVTTSTKVLKTE 628
LA+ D + +LWD+ T+VL E
Sbjct: 368 LATACYDSSWRLWDLEQKTEVLHQE 392
Score = 40 (19.1 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 214 SNQDAANQIN-QKEVHWGLLEDSLENR 239
S+ D I Q+ +H+G LE+S R
Sbjct: 2 SDDDDIQYIKRQRTLHYGSLEESERKR 28
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 253 (94.1 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 57/207 (27%), Positives = 100/207 (48%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH V S SP G+ + SSS D IRLW + + W V F+P +
Sbjct: 61 EGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQH 120
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
A+ SH I+ ++ + + + + + + Y+A+G+ D + ++D+++G
Sbjct: 121 LATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG 180
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY 597
+ + GH I SL S D + + + +DG I ++D+ L GH S V +A+
Sbjct: 181 KLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAF 240
Query: 598 SCEGSLLASGSADCTVKLWDVTTSTKV 624
S + + S S+D +VK+WDV+ T V
Sbjct: 241 SPDDAHFVSSSSDKSVKVWDVSARTCV 267
Score = 246 (91.7 bits), Expect = 6.1e-20, P = 6.1e-20
Identities = 61/189 (32%), Positives = 102/189 (53%)
Query: 434 DFILSSSADTTIRLWS---TKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIW 490
+ ++S S D +++W +L +GH V V +P G+ ASSS D R+W
Sbjct: 33 ELVISGSLDDLVKVWKWSDERLEMQWAL-EGHQLGVVSVDVSPSGNIMASSSLDAHIRLW 91
Query: 491 SMDRIQPLR-IMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSM 549
++ + +R I AG + D V + + ++ATGS V ++ V +G+
Sbjct: 92 DLESGKQIRSIDAGPV-DAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKF 150
Query: 550 ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSA 609
ILS+A SPDG+Y+ASG DG I ++D+A+G+ + L GH + +L +S + LL + S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASD 210
Query: 610 DCTVKLWDV 618
D +K++DV
Sbjct: 211 DGYIKIYDV 219
Score = 223 (83.6 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 64/269 (23%), Positives = 116/269 (43%)
Query: 365 LVAGGFSDSSLKVWDMA--KLGQQAVSSGLQ-G--ENDTTPREDIIGPNGRK---RSYTL 416
LV G D +KVW + +L Q G Q G D +P +I+ + R + L
Sbjct: 34 LVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDL 93
Query: 417 YQGH------SGPV--YSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
G +GPV +S +FSP + + S + ++ + +
Sbjct: 94 ESGKQIRSIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILS 153
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
+ ++P G Y AS + D I+ + + L + GH + + + + + T S D
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGY 213
Query: 529 VRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
++++DV GH S +L++A SPD + S D ++ +WD+++ CV + H
Sbjct: 214 IKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDH 273
Query: 589 TSCVWTLAYSCEGSLLASGSADCTVKLWD 617
VW + Y+ GS + S D + ++D
Sbjct: 274 QDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
Score = 186 (70.5 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 54/182 (29%), Positives = 89/182 (48%)
Query: 467 WDVQFNPQGHYFASSSHDRTARIW--SMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGS 524
W N S S D ++W S +R++ + GH V V + N +A+ S
Sbjct: 24 WGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSPSGNIMASSS 83
Query: 525 SDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTP 584
D +RLWD+ SG+ +R S+A SPD +++A+G G + ++ + +G+
Sbjct: 84 LDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYS 143
Query: 585 LMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPT 644
L + ++AYS +G LASG+ D + ++D+ T K+L T E +RSL T T
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG-KLLHTLEGHAMP-IRSL-TFST 200
Query: 645 KS 646
S
Sbjct: 201 DS 202
Score = 186 (70.5 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 54/239 (22%), Positives = 111/239 (46%)
Query: 353 GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQ--AVSSG------LQGENDT------ 398
G+ +S G+++A D+ +++WD+ G+Q ++ +G + D+
Sbjct: 66 GVVSVDVSPSGNIMASSSLDAHIRLWDLES-GKQIRSIDAGPVDAWSVAFSPDSQHLATG 124
Query: 399 --TPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANL 456
+ +I G K+ Y+L + S ++SP G ++ S + D I ++ L
Sbjct: 125 SHVGKVNIFGVETGKKEYSL-DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLL 183
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN 516
+GH P+ + F+ ++S D +I+ + ++GH S V V + +
Sbjct: 184 HTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPD 243
Query: 517 CNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWD 575
+ + SSDK+V++WDVS+ CV F+ H+ + + + +G + S +D I ++D
Sbjct: 244 DAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
>RGD|708344 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein), beta
polypeptide 3" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0044297 "cell
body" evidence=IDA] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:708344 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043005 GO:GO:0004871
GO:GO:0044297 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C
EMBL:L29090 EMBL:BC086422 IPI:IPI00204239 PIR:I53871
RefSeq:NP_068630.1 UniGene:Rn.27065 ProteinModelPortal:P52287
SMR:P52287 STRING:P52287 PhosphoSite:P52287 PRIDE:P52287
Ensembl:ENSRNOT00000021481 GeneID:60449 KEGG:rno:60449
UCSC:RGD:708344 InParanoid:P52287 NextBio:612200
ArrayExpress:P52287 Genevestigator:P52287
GermOnline:ENSRNOG00000015541 Uniprot:P52287
Length = 340
Score = 253 (94.1 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 58/233 (24%), Positives = 110/233 (47%)
Query: 403 DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGH 462
+++G + TL +GH +Y+ ++ ++S+S D + +W T +
Sbjct: 38 EVVGRVQMRTRRTL-RGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLR 96
Query: 463 NYPVWDVQFNPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSDVDCVRWHINCN 518
+ V + P G++ A D I+S+ ++ R ++ H + C R+ ++ N
Sbjct: 97 SSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRF-LDDN 155
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
I T S D T LWD+ +G+ +F+GH +SLA+SPD + SG D + +WD+
Sbjct: 156 NIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVRE 215
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKS 631
G C GH S + + + G + +GS D + +L+D+ ++ +S
Sbjct: 216 GTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSHES 268
Score = 223 (83.6 bits), Expect = 8.3e-16, Sum P(2) = 8.3e-16
Identities = 59/202 (29%), Positives = 98/202 (48%)
Query: 420 HSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
H+G + F L D I++SS DTT LW + + GH + +P F
Sbjct: 142 HTGYLSCCRF--LDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLF 199
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
S + D +A++W + + GH SD++ + + N I TGS D + RL+D+ + +
Sbjct: 200 ISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQ 259
Query: 539 CVRIFIGHRSMIL---SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTL 595
+ + H S+I S+A S GR + +G +D +WD V L GH + V L
Sbjct: 260 ELTAY-SHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSLKCERVGVLSGHDNRVSCL 318
Query: 596 AYSCEGSLLASGSADCTVKLWD 617
+ +G +A+GS D +K+W+
Sbjct: 319 GVTADGMAVATGSWDSFLKIWN 340
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 43/203 (21%), Positives = 85/203 (41%)
Query: 348 INTHNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT---TPRED 403
++ H G L+C D ++V D++ +WD+ Q+ V G G+ + +P
Sbjct: 139 LSAHTGYLSCCRFLDDNNIVTSS-GDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYK 197
Query: 404 IIGPNGRKRSYTLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
+ S L+ GH + + F P G+ I + S D + RL+ +
Sbjct: 198 LFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRA 257
Query: 453 NANLVCYKGHNY--PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDC 510
+ L Y + + V F+ G + D +W + + + +++GH + V C
Sbjct: 258 DQELTAYSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSLKCERVGVLSGHDNRVSC 317
Query: 511 VRWHINCNYIATGSSDKTVRLWD 533
+ + +ATGS D +++W+
Sbjct: 318 LGVTADGMAVATGSWDSFLKIWN 340
Score = 37 (18.1 bits), Expect = 8.3e-16, Sum P(2) = 8.3e-16
Identities = 7/18 (38%), Positives = 8/18 (44%)
Query: 362 DGSLVAGGFSDSSLKVWD 379
D L+ D L VWD
Sbjct: 66 DSKLLVSASQDGKLIVWD 83
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 277 (102.6 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 63/219 (28%), Positives = 107/219 (48%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQ 474
TL Q H GP+++ ++ G++ILS+ D T +W + H+ P DV +
Sbjct: 270 TLGQ-HKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-N 327
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDV 534
FAS S D + + +P++ GH ++V+ ++W + +A+ S D T+++W +
Sbjct: 328 NTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM 387
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGR---------YMASGDEDGTIMMWDLASGRCVTPL 585
CV H I ++ SP G +AS D T+ +WD+ G C+ L
Sbjct: 388 KQDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTL 447
Query: 586 MGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
H V+++A+S +G LASGS D V +W+ + T V
Sbjct: 448 TKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGTLV 486
Score = 264 (98.0 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19
Identities = 86/310 (27%), Positives = 141/310 (45%)
Query: 357 ASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQG----ENDTTPRE---DI-IGPN 408
A+ + + G + +++ + K G+ V+ G N + P E D+ I PN
Sbjct: 110 AAAAAAATAATAGTTTTAVSQQNTPKNGEATVNGEENGAHAINNHSKPMEIDGDVEIPPN 169
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNAN-----LV---CYK 460
T+ +GH V+ +++P+ D + S S D+T R+W+ N+N LV C +
Sbjct: 170 ----KATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIR 225
Query: 461 --GHNYP----VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
GH+ P V + +N G A+ S+D ARIW+ D + H + ++W+
Sbjct: 226 EGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDG-NLASTLGQHKGPIFALKWN 284
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
NYI + DKT +WD +GE + F H + L + + + AS D I +
Sbjct: 285 KKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVC 343
Query: 575 DLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTN 634
L R V GHT+ V + + G LLAS S D T+K+W + T V + S
Sbjct: 344 RLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHS--K 401
Query: 635 RLRSLKTLPT 644
+ ++K PT
Sbjct: 402 EIYTIKWSPT 411
Score = 252 (93.8 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
Identities = 60/208 (28%), Positives = 102/208 (49%)
Query: 420 HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFA 479
HS P + F S S D I + + + ++GH V ++++P G A
Sbjct: 316 HSAPALDVDWQNNTTFA-SCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLA 374
Query: 480 SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW--------HINCNY-IATGSSDKTVR 530
S S D T +IWSM + + + H ++ ++W + N N +A+ S D TVR
Sbjct: 375 SCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVR 434
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
LWDV G C+ H+ + S+A SPDG+Y+ASG D + +W+ SG V G T
Sbjct: 435 LWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGTLVHSYRG-TG 493
Query: 591 CVWTLAYSCEGSLLASGSADCTVKLWDV 618
++ + ++ G + + ++D +V + D+
Sbjct: 494 GIFEVCWNARGDKVGASASDGSVCVLDL 521
Score = 196 (74.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 48/177 (27%), Positives = 85/177 (48%)
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
G R +QGH+ V + + P G + S S D T+++WS K + + + H+ ++
Sbjct: 346 GCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYT 405
Query: 469 VQFNPQGH---------YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
++++P G AS+S D T R+W +DR + + H V V + + Y
Sbjct: 406 IKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKY 465
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
+A+GS DK V +W+ SG V + G I + + G + + DG++ + DL
Sbjct: 466 LASGSFDKCVHIWNTQSGTLVHSYRGTGG-IFEVCWNARGDKVGASASDGSVCVLDL 521
Score = 39 (18.8 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 7 VEF-VATYLKKKGFSEAENALQAEIQRNKSSNNTN 40
V F V YL++ GFS + A I+ + S +N N
Sbjct: 8 VNFLVYRYLQESGFSHS--AFTFGIESHISQSNIN 40
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 228 (85.3 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 63/225 (28%), Positives = 114/225 (50%)
Query: 403 DIIGPNGRKRSYTLYQGHSGPVYSASFSPLG-DFILSSSADTTIRLWSTKLNANLVCYKG 461
D P+G R ++ H+ VYS ++ + D ++ S D +I++W+ +++ +L ++
Sbjct: 87 DTQAPSGG-RPIKSFEEHTKEVYSVDWNLVTKDTFITGSWDQSIKIWNPRMDRSLKTFRE 145
Query: 462 HNYPVWDVQFNPQG-HYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH-INCNY 519
H Y ++ ++P+ H FAS S DRT +IW + L + H ++ W+ N
Sbjct: 146 HRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRDNRSLNTIKAHDHEILTCDWNKYNDKE 205
Query: 520 IATGSSDKTVRLWDVSSGEC-VRIFIGHRSMILSLAMSPDGRYM-ASGDEDGTIMMWDLA 577
+ TGS DKT+R+WD+ + I GH + + SP M AS D ++++WD A
Sbjct: 206 VVTGSVDKTIRIWDIRYPDRPTTILRGHTYAVRRIKCSPHSESMLASCSYDMSVIVWDRA 265
Query: 578 SGR--CVTPLMGHTSCVWTLAYSC--EGSLLASGSADCTVKLWDV 618
+ + + HT V L ++ +G + AS S D V +W++
Sbjct: 266 REQDPIIARMDHHTEFVVGLDWNMFIDGQM-ASCSWDEQVCVWNL 309
Score = 182 (69.1 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 57/205 (27%), Positives = 98/205 (47%)
Query: 424 VYSASFSPLGD-FILSSSADTTIRLWSTKLNAN---LVCYKGHNYPVWDVQFN-PQGHYF 478
+Y ++S + + SSS D +I++W T+ + + ++ H V+ V +N F
Sbjct: 61 LYDCTWSEENECHVASSSGDGSIKIWDTQAPSGGRPIKSFEEHTKEVYSVDWNLVTKDTF 120
Query: 479 ASSSHDRTARIWS--MDRIQPLRIMAGHLSDVDCVRWHI-NCNYIATGSSDKTVRLWDVS 535
+ S D++ +IW+ MDR L+ H + W N + A+ S D+T+++WD
Sbjct: 121 ITGSWDQSIKIWNPRMDR--SLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSR 178
Query: 536 SGECVRIFIGHRSMILSLAMSP-DGRYMASGDEDGTIMMWDLA-SGRCVTPLMGHTSCVW 593
+ H IL+ + + + + +G D TI +WD+ R T L GHT V
Sbjct: 179 DNRSLNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDIRYPDRPTTILRGHTYAVR 238
Query: 594 TLAYSCEG-SLLASGSADCTVKLWD 617
+ S S+LAS S D +V +WD
Sbjct: 239 RIKCSPHSESMLASCSYDMSVIVWD 263
Score = 63 (27.2 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 343 SFYTFINTHNGL-NCASISQDGSLVAGGFSDSSLKVWD-MAKLGQQAVSS 390
+F TF +T +GL +C ++ VA D S+K+WD A G + + S
Sbjct: 51 AFKTF-DTRDGLYDCTWSEENECHVASSSGDGSIKIWDTQAPSGGRPIKS 99
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 252 (93.8 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 64/233 (27%), Positives = 113/233 (48%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNP 473
+TL +GH V S + S G SSS D IRLW + + W V F+P
Sbjct: 58 WTL-EGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSP 116
Query: 474 QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
Y A+ SH I+ ++ + + + + + + Y+A+G+ D + ++D
Sbjct: 117 DSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 534 VSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVW 593
+++G+ + GH I SL SPD + + + +DG I ++D+ L GH S V
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVL 236
Query: 594 TLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKS 646
++A+S + + S S+D ++K+WD T+S + T +++ S+K PT S
Sbjct: 237 SVAFSPDDTHFVSSSSDKSIKVWD-TSSRSCVNTFFDH-QDQVWSVKYNPTGS 287
Score = 240 (89.5 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 61/186 (32%), Positives = 96/186 (51%)
Query: 436 ILSSSADTTIRLWS---TKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSM 492
I++ S D +++W KL +GH V V + G ASSS D R+W +
Sbjct: 35 IVTGSLDDLVKVWKWSDEKLELQWTL-EGHQLGVVSVNISQNGAIAASSSLDAHIRLWDL 93
Query: 493 DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILS 552
+ + ++ M D V + + YIATGS V ++ V SG+ ILS
Sbjct: 94 ETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILS 153
Query: 553 LAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCT 612
+A SPDG+Y+ASG DG I ++D+A+G+ + L GH + +L +S + LL + S D
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 613 VKLWDV 618
+K++DV
Sbjct: 214 IKIYDV 219
Score = 220 (82.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 49/199 (24%), Positives = 90/199 (45%)
Query: 421 SGPV--YSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
+GPV ++ +FSP +I + S + ++ + + + ++P G Y
Sbjct: 104 AGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYL 163
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
AS + D I+ + + L + GH + + + + + T S D ++++DV
Sbjct: 164 ASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 223
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYS 598
GH S +LS+A SPD + S D +I +WD +S CV H VW++ Y+
Sbjct: 224 LAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYN 283
Query: 599 CEGSLLASGSADCTVKLWD 617
GS + S D + ++D
Sbjct: 284 PTGSKIVSAGDDRAIHIYD 302
Score = 218 (81.8 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 61/239 (25%), Positives = 113/239 (47%)
Query: 353 GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT-----TPREDIIGP 407
G+ +ISQ+G++ A D+ +++WD+ + G+Q + S G D +P I
Sbjct: 66 GVVSVNISQNGAIAASSSLDAHIRLWDL-ETGKQ-IKSMDAGPVDAWTVAFSPDSKYIAT 123
Query: 408 N---GRKRSYTLYQG---HS----GP-VYSASFSPLGDFILSSSADTTIRLWSTKLNANL 456
G+ + + G HS G + S ++SP G ++ S + D I ++ L
Sbjct: 124 GSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLL 183
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN 516
+GH P+ + F+P ++S D +I+ + ++GH S V V + +
Sbjct: 184 HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPD 243
Query: 517 CNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWD 575
+ + SSDK++++WD SS CV F H+ + S+ +P G + S +D I ++D
Sbjct: 244 DTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 45/154 (29%), Positives = 78/154 (50%)
Query: 490 WSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSM 549
WS ++++ + GH V V N A+ S D +RLWD+ +G+ ++
Sbjct: 49 WSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVD 108
Query: 550 ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSA 609
++A SPD +Y+A+G G + ++ + SG+ L + ++AYS +G LASG+
Sbjct: 109 AWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAI 168
Query: 610 DCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLP 643
D + ++D+ T K+L T E +RSL P
Sbjct: 169 DGIINIFDIATG-KLLHTLEGHAMP-IRSLTFSP 200
>SGD|S000004722 [details] [associations]
symbol:ASC1 "G-protein beta subunit and guanine nucleotide
dissociation inhibitor" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004871 "signal
transducer activity" evidence=IMP;IPI] [GO:0001403 "invasive growth
in response to glucose limitation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0017148
"negative regulation of translation" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IMP;IPI]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IPI]
[GO:0005092 "GDP-dissociation inhibitor activity" evidence=IDA]
[GO:0010255 "glucose mediated signaling pathway" evidence=IMP;IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004722 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 EMBL:BK006946 GO:GO:0004871
GO:GO:0001403 EMBL:Z49702 GO:GO:0022627 GO:GO:0010255
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 GO:GO:0005092 OrthoDB:EOG437VPP
PIR:S54578 RefSeq:NP_013834.1 PDB:1TRJ PDB:3FRX PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3RFG PDB:3RFH PDB:3U5C PDB:3U5G PDBsum:1TRJ
PDBsum:3FRX PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3RFG
PDBsum:3RFH PDBsum:3U5C PDBsum:3U5G ProteinModelPortal:P38011
SMR:P38011 DIP:DIP-6465N IntAct:P38011 MINT:MINT-652105
STRING:P38011 UCD-2DPAGE:P38011 PaxDb:P38011 PeptideAtlas:P38011
EnsemblFungi:YMR116C GeneID:855143 KEGG:sce:YMR116C
EvolutionaryTrace:P38011 NextBio:978537 Genevestigator:P38011
GermOnline:YMR116C Uniprot:P38011
Length = 319
Score = 252 (93.8 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 68/240 (28%), Positives = 114/240 (47%)
Query: 418 QGHSGPVYS-ASFSPLGDFILSSSADTTIRLWST-----KLNANLVCYKGHNYPVWDVQF 471
+GH+G V S A+ + + +LS+S D T+ W K + +KGH++ V D
Sbjct: 14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTL 73
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
G Y S+S D+T R+W + + + GH SDV V + I +GS DKT+++
Sbjct: 74 TADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKV 133
Query: 532 WDVSSGECVRIFIGHRSMILSLAMSP------DGRYMASGDEDGTIMMWDLASGRCVTPL 585
W + G+C+ +GH + + + P D + S D + W+L +
Sbjct: 134 WTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADF 192
Query: 586 MGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTK 645
+GH S + TL S +G+L+AS D + LW++ K + T S + + SL P +
Sbjct: 193 IGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAK-KAMYT--LSAQDEVFSLAFSPNR 249
Score = 241 (89.9 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 63/199 (31%), Positives = 100/199 (50%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
++GHS V + + G + LS+S D T+RLW + GH V V + +
Sbjct: 61 FKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKAS 120
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY------IATGSSDKTVR 530
S S D+T ++W++ + Q L + GH V VR N I + +DK V+
Sbjct: 121 MIISGSRDKTIKVWTI-KGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVK 179
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
W+++ + FIGH S I +L SPDG +AS +DG IM+W+LA+ + + L
Sbjct: 180 AWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDE 239
Query: 591 CVWTLAYSCEGSLLASGSA 609
V++LA+S LA+ +A
Sbjct: 240 -VFSLAFSPNRYWLAAATA 257
Score = 172 (65.6 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 54/223 (24%), Positives = 101/223 (45%)
Query: 413 SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFN 472
+Y + GH V S I+S S D TI++W+ K L GHN V V+
Sbjct: 99 TYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQC-LATLLGHNDWVSQVRVV 157
Query: 473 PQGHY------FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSD 526
P S+ +D+ + W++++ Q GH S+++ + + IA+ D
Sbjct: 158 PNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKD 217
Query: 527 KTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLM 586
+ LW++++ + + + + + SLA SP+ ++A+ G I ++ L V L
Sbjct: 218 GEIMLWNLAAKKAMYT-LSAQDEVFSLAFSPNRYWLAAATATG-IKVFSLDPQYLVDDLR 275
Query: 587 ----GHTSCVW----TLAYSCEGSLLASGSADCTVKLWDVTTS 621
G++ +LA+S +G L +G D +++W V T+
Sbjct: 276 PEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318
Score = 48 (22.0 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 9/33 (27%), Positives = 20/33 (60%)
Query: 349 NTHNGLNCASISQDGSLVAGGFSDSSLKVWDMA 381
++H +C +++ DG+ D +L++WD+A
Sbjct: 64 HSHIVQDC-TLTADGAYALSASWDKTLRLWDVA 95
>MGI|MGI:95785 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein),
beta 3" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0044297 "cell
body" evidence=ISO] [GO:0051020 "GTPase binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95785 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
EMBL:AC002397 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784
KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C EMBL:AK014789 EMBL:BC018239
EMBL:U38494 IPI:IPI00116938 RefSeq:NP_038558.1 UniGene:Mm.68889
ProteinModelPortal:Q61011 SMR:Q61011 STRING:Q61011
PhosphoSite:Q61011 PaxDb:Q61011 PRIDE:Q61011
Ensembl:ENSMUST00000024206 GeneID:14695 KEGG:mmu:14695
InParanoid:Q61011 NextBio:286643 Bgee:Q61011 Genevestigator:Q61011
GermOnline:ENSMUSG00000023439 Uniprot:Q61011
Length = 340
Score = 252 (93.8 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 57/233 (24%), Positives = 111/233 (47%)
Query: 403 DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGH 462
+++G + TL +GH +Y+ ++ ++S+S D + +W T +
Sbjct: 38 EVVGRVQMRTRRTL-RGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLR 96
Query: 463 NYPVWDVQFNPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSDVDCVRWHINCN 518
+ V + P G++ A D I+++ ++ R ++ H + C R+ ++ N
Sbjct: 97 SSWVMTCAYAPSGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRF-LDDN 155
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
I T S D T LWD+ +G+ +F+GH +SLA+SPD + SG D + +WD+
Sbjct: 156 NIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVRE 215
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKS 631
G C GH S + + + G + +GS D + +L+D+ ++ ++S
Sbjct: 216 GTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSQES 268
Score = 214 (80.4 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 57/201 (28%), Positives = 96/201 (47%)
Query: 420 HSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
H+G + F L D I++SS DTT LW + + GH + +P F
Sbjct: 142 HTGYLSCCRF--LDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLF 199
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
S + D +A++W + + GH SD++ + + N I TGS D + RL+D+ + +
Sbjct: 200 ISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQ 259
Query: 539 CVRIFIGHRSM--ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
+ + + I S+A S GR + +G +D +WD V L GH + V L
Sbjct: 260 ELTAYSQESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSLKCERVGILSGHDNRVSCLG 319
Query: 597 YSCEGSLLASGSADCTVKLWD 617
+ +G +A+GS D +K+W+
Sbjct: 320 VTADGMAVATGSWDSFLKIWN 340
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 44/203 (21%), Positives = 85/203 (41%)
Query: 348 INTHNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT---TPRED 403
++ H G L+C D ++V D++ +WD+ Q+ V G G+ + +P
Sbjct: 139 LSAHTGYLSCCRFLDDNNIVTSS-GDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYK 197
Query: 404 IIGPNGRKRSYTLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
+ S L+ GH + + F P G+ I + S D + RL+ +
Sbjct: 198 LFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRA 257
Query: 453 NANLVCYKGHNY--PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDC 510
+ L Y + + V F+ G + D +W + + + I++GH + V C
Sbjct: 258 DQELTAYSQESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSLKCERVGILSGHDNRVSC 317
Query: 511 VRWHINCNYIATGSSDKTVRLWD 533
+ + +ATGS D +++W+
Sbjct: 318 LGVTADGMAVATGSWDSFLKIWN 340
Score = 37 (18.1 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 7/18 (38%), Positives = 8/18 (44%)
Query: 362 DGSLVAGGFSDSSLKVWD 379
D L+ D L VWD
Sbjct: 66 DSKLLVSASQDGKLIVWD 83
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 251 (93.4 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 69/211 (32%), Positives = 103/211 (48%)
Query: 418 QGHSGPVYSASFSP-LGDFILSSSADTTIRLWS-TKLNANLV----CYKGHNYPVWDVQF 471
+GHSG V + +P D ILS+S D TI +W T+ N +GH++ V DV
Sbjct: 12 KGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+ G + S S D T R+W + R GH DV V + + I +GS DKT++L
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKL 131
Query: 532 WDVSSGECVRIFI--GHRSMILSLAMSPDGR--YMASGDEDGTIMMWDLASGRCVTPLMG 587
W+ + G C H + + SP+ + S D + +W+LA+ + T +G
Sbjct: 132 WN-TLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIG 190
Query: 588 HTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
HT + T+ S +GSL ASG D LWD+
Sbjct: 191 HTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 244 (91.0 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 62/204 (30%), Positives = 98/204 (48%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GHS V S G F LS S D T+RLW + GH V V F+
Sbjct: 60 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQ 119
Query: 478 FASSSHDRTARIWSMDRIQPLRIMA-GHLSDVDCVRWHINCN--YIATGSSDKTVRLWDV 534
S S D+T ++W+ + I H V CVR+ N + I + DK V++W++
Sbjct: 120 IVSGSRDKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNL 179
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
++ + IGH + ++ +SPDG ASG +DG M+WDL G+ + L G + +
Sbjct: 180 ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDT-INA 238
Query: 595 LAYSCEGSLLASGSADCTVKLWDV 618
L +S L + + ++K+WD+
Sbjct: 239 LCFSPNRYWLCAATGP-SIKIWDL 261
Score = 214 (80.4 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 62/197 (31%), Positives = 93/197 (47%)
Query: 460 KGHNYPVWDVQFNPQ-GHYFASSSHDRTARIWSMDRIQ-----PLRIMAGHLSDVDCVRW 513
KGH+ V + PQ S+S D+T +W + R + P R + GH V V
Sbjct: 12 KGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 514 HINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMM 573
+ + +GS D T+RLWD+++G R F+GH +LS+A S D R + SG D TI +
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKL 131
Query: 574 WDLASGRCVTPLM--GHTSCVWTLAYSCEGS--LLASGSADCTVKLWDVTTSTKVLKTEE 629
W+ G C + HT V + +S S ++ S D VK+W++ LKT
Sbjct: 132 WNTL-GVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCK--LKTNH 188
Query: 630 KSGTNRLRSLKTLPTKS 646
T L ++ P S
Sbjct: 189 IGHTGYLNTVTVSPDGS 205
Score = 194 (73.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 42/135 (31%), Positives = 69/135 (51%)
Query: 520 IATGSSDKTVRLWDVSSGEC-----VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
I + S DKT+ +W ++ E R GH + + +S DG++ SG DGT+ +W
Sbjct: 31 ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLW 90
Query: 575 DLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTN 634
DL +G +GHT V ++A+S + + SGS D T+KLW+ K ++ S T
Sbjct: 91 DLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYT-IQDDSHTE 149
Query: 635 RLRSLKTLPTKSTPV 649
+ ++ P S P+
Sbjct: 150 WVSCVRFSPNSSNPI 164
Score = 173 (66.0 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 58/221 (26%), Positives = 97/221 (43%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD--VQFNPQ 474
+ GH+ V S +FS I+S S D TI+LW+T L + ++ W V+F+P
Sbjct: 101 FVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNT-LGVCKYTIQDDSHTEWVSCVRFSPN 159
Query: 475 GH--YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLW 532
S D+ ++W++ + GH ++ V + + A+G D LW
Sbjct: 160 SSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLW 219
Query: 533 DVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT--- 589
D++ G+ + G + I +L SP+ RY +I +WDL V L
Sbjct: 220 DLNEGKHLYTLDGGDT-INALCFSPN-RYWLCAATGPSIKIWDLEGKIIVDELRQDIITT 277
Query: 590 -------SCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTK 623
C +LA+S +G L +G D +++W VT T+
Sbjct: 278 NSKAEPPQCT-SLAWSADGQTLFAGYTDNLIRVWQVTIGTR 317
Score = 53 (23.7 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 359 ISQDGSLVAGGFSDSSLKVWDM 380
IS DG G D +L++WD+
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDL 92
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 251 (93.4 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 72/241 (29%), Positives = 110/241 (45%)
Query: 424 VYSASFSPLGDFILSSSADTTIRLWSTKLNAN--LV-CYKGHNYPVWDVQFNPQGHYFAS 480
V++ ++ P G+ + + + D I++WS N LV +GH V V ++P G + A
Sbjct: 27 VWNLAWHPNGEILATCANDKYIQIWSKDTNGKWGLVQSLEGHEKTVRRVAWSPCGRFLAG 86
Query: 481 SSHDRTARIW--SMDRIQPLRI--MAGHLSDVDCVRWHINCNYIATGSSDKTVRLW---D 533
+S D + IW S D ++ + + GH +V V W +AT S DK++ +W D
Sbjct: 87 ASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAWDSTGTLLATCSRDKSIWIWQMED 146
Query: 534 VSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG--RCVTPLMGHTSC 591
+ EC+ I GH I + P+ +AS D TI W G C+ L GH S
Sbjct: 147 DNDFECLSINSGHGQDIKCVLWHPNEELLASSSYDDTIKFWKDIDGDWECINTLTGHESS 206
Query: 592 VWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYS 651
+W LA++ +G L S D V W K K EK + K S P+YS
Sbjct: 207 IWDLAFNKDGDKLVSCGEDKLVLFW------KFDKENEKW----INIFKFKNENSRPIYS 256
Query: 652 L 652
+
Sbjct: 257 I 257
Score = 245 (91.3 bits), Expect = 7.8e-20, P = 7.8e-20
Identities = 60/224 (26%), Positives = 108/224 (48%)
Query: 408 NGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLN----ANLVCYKGHN 463
NG+ +GH V ++SP G F+ +S D + +W + ++ +GH
Sbjct: 56 NGKWGLVQSLEGHEKTVRRVAWSPCGRFLAGASFDASTSIWEKSKDELEFTHVSSLEGHT 115
Query: 464 YPVWDVQFNPQGHYFASSSHDRTARIWSMDR---IQPLRIMAGHLSDVDCVRWHINCNYI 520
Y V V ++ G A+ S D++ IW M+ + L I +GH D+ CV WH N +
Sbjct: 116 YEVKSVAWDSTGTLLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPNEELL 175
Query: 521 ATGSSDKTVRLW-DVSSG-ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW--DL 576
A+ S D T++ W D+ EC+ GH S I LA + DG + S ED ++ W D
Sbjct: 176 ASSSYDDTIKFWKDIDGDWECINTLTGHESSIWDLAFNKDGDKLVSCGEDKLVLFWKFDK 235
Query: 577 ASGRCVTPLM---GHTSCVWTLAYSCEGSLLASGSADCTVKLWD 617
+ + + ++ ++++ +S + + +GSAD ++ ++
Sbjct: 236 ENEKWINIFKFKNENSRPIYSIDWSSLTNTIVTGSADDSIIFYE 279
Score = 144 (55.7 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 42/178 (23%), Positives = 75/178 (42%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK---GHNYPVWDVQF 471
++ GH + + P + + SSS D TI+ W ++ + C GH +WD+ F
Sbjct: 154 SINSGHGQDIKCVLWHPNEELLASSSYDDTIKFWKD-IDGDWECINTLTGHESSIWDLAF 212
Query: 472 NPQGHYFASSSHDRTARIWSMDR-----IQPLRIMAGHLSDVDCVRWHINCNYIATGSSD 526
N G S D+ W D+ I + + + + W N I TGS+D
Sbjct: 213 NKDGDKLVSCGEDKLVLFWKFDKENEKWINIFKFKNENSRPIYSIDWSSLTNTIVTGSAD 272
Query: 527 KTVRLWDVSSGEC---VRIFI----GHRSMILSLAMSPDGR-YMASGDEDGTIMMWDL 576
++ ++ S + +I + H S + +P + +AS +DG I +W+L
Sbjct: 273 DSIIFYEQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKFKNILASCGDDGFIKIWEL 330
Score = 43 (20.2 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 363 GSLVAGGFSDSSLKVWDMAK 382
G +AG D+S +W+ +K
Sbjct: 81 GRFLAGASFDASTSIWEKSK 100
Score = 38 (18.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 345 YTFINTHNG--LNCASISQD--GSLVAGGFSDSSLKVWDM 380
+T +++ G S++ D G+L+A D S+ +W M
Sbjct: 105 FTHVSSLEGHTYEVKSVAWDSTGTLLATCSRDKSIWIWQM 144
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 271 (100.5 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 64/174 (36%), Positives = 90/174 (51%)
Query: 461 GHNYPVWDVQFNPQ-GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
GH + F P + + D TARIW D P+ + GH + V CV W +
Sbjct: 141 GHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEV 200
Query: 520 IATGSSDKTVRLWDVSSGECVRIFI-GHRSMILSLAMSP-----DGRY--MASGDEDGTI 571
IATGS D T+RLWD SG+C+ + GH I SL+ P G +AS +DGTI
Sbjct: 201 IATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTI 260
Query: 572 MMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
+WD S C + GHT+ V + + +G LL SGS D TV++WD+ + + +
Sbjct: 261 KIWDTVSRVCQYTMSGHTNSVSCVKWGGQG-LLYSGSHDRTVRVWDINSQGRCI 313
Score = 220 (82.5 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 73/270 (27%), Positives = 125/270 (46%)
Query: 366 VAGGFSDSSLKVWD-MAKLGQQAVSS-------------GL--QGENDTTPRE-DIIGPN 408
+A D ++K+WD ++++ Q +S GL G +D T R DI N
Sbjct: 251 LASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGLLYSGSHDRTVRVWDI---N 307
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSA-DTTIRLWSTKLNANLVCYKGHNYPVW 467
+ R + + H+ V S S D+ L A D T + ST A + + +
Sbjct: 308 SQGRCINILKSHAHWVNHLSLST--DYALRIGAFDHTGKKPSTPEEAQKKALENYE-KIC 364
Query: 468 DVQFNPQGHYFASSSHDRTARIWS-MDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSD 526
N + ++S D T +W+ + +P+ M GH V+ V + + YI + S D
Sbjct: 365 KKNGNSE-EMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFD 423
Query: 527 KTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLM 586
+++LWD G+ + F GH + + +A S D R + S +D T+ +WD+ + + L
Sbjct: 424 NSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLP 483
Query: 587 GHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
GH V+T+ +S +G + SG D V+LW
Sbjct: 484 GHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 217 (81.4 bits), Expect = 6.6e-18, Sum P(2) = 6.6e-18
Identities = 57/209 (27%), Positives = 99/209 (47%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLV-CYKGHNYPVWDVQFN 472
YT+ GH+ V + G + S S D T+R+W + K H + V + +
Sbjct: 272 YTM-SGHTNSVSCVKWGGQG-LLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLS 329
Query: 473 PQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLW 532
+ + D T + S + + + + C + + + T S D T+ LW
Sbjct: 330 TD-YALRIGAFDHTGKKPSTPEEAQKKALENY--EKICKKNGNSEEMMVTASDDYTMFLW 386
Query: 533 D-VSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSC 591
+ + S + + GH+ ++ +A SPDGRY+ S D +I +WD G+ ++ GH +
Sbjct: 387 NPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVAS 446
Query: 592 VWTLAYSCEGSLLASGSADCTVKLWDVTT 620
V+ +A+S + LL S S D T+K+WDV T
Sbjct: 447 VYQVAWSSDCRLLVSCSKDTTLKVWDVRT 475
Score = 216 (81.1 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 60/213 (28%), Positives = 97/213 (45%)
Query: 412 RSYTLYQGHSGPVYSASFSP-LGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQ 470
RS + GH + ++F+P +++ + D T R+W + KGH V V
Sbjct: 134 RSSSAIAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVS 193
Query: 471 FNPQGHYFASSSHDRTARIWSMDRIQPLR-IMAGHLSDVDCVRW---HI----NCNYIAT 522
++P G A+ S D T R+W Q L + GH + + W H+ + +A+
Sbjct: 194 WSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLAS 253
Query: 523 GSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS-GRC 581
S D T+++WD S C GH + + + G + SG D T+ +WD+ S GRC
Sbjct: 254 SSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQG-LLYSGSHDRTVRVWDINSQGRC 312
Query: 582 VTPLMGHTSCVWTLAYSCEGSLLASGSADCTVK 614
+ L H V L+ S + +L G+ D T K
Sbjct: 313 INILKSHAHWVNHLSLSTDYALRI-GAFDHTGK 344
Score = 213 (80.0 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 75/245 (30%), Positives = 114/245 (46%)
Query: 394 GENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLN 453
G D T R I + + +TL +GH V S+SP G+ I + S D TIRLW K
Sbjct: 162 GAGDNTAR--IWDCDTQTPMHTL-KGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSG 218
Query: 454 ANLV-CYKGHNYPVWDVQFNP-----QGHY--FASSSHDRTARIW-SMDRIQPLRIMAGH 504
L +GH+ + + + P G ASSS D T +IW ++ R+ M+GH
Sbjct: 219 QCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYT-MSGH 277
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSS-GECVRIFIGHRSMILSLAMSPDGRYMA 563
+ V CV+W + +GS D+TVR+WD++S G C+ I H + L++S D Y
Sbjct: 278 TNSVSCVKWG-GQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTD--YAL 334
Query: 564 SGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCE--GS---LLASGSADCTVKLWDV 618
I +D + TP + C+ G+ ++ + S D T+ LW+
Sbjct: 335 R------IGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWNP 388
Query: 619 TTSTK 623
STK
Sbjct: 389 LKSTK 393
Score = 204 (76.9 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 62/244 (25%), Positives = 109/244 (44%)
Query: 345 YTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQ--QAVSSGLQGENDTTPRE 402
YT N ++C G L +G D +++VWD+ G+ + S N +
Sbjct: 272 YTMSGHTNSVSCVKWGGQGLLYSGSH-DRTVRVWDINSQGRCINILKSHAHWVNHLSLST 330
Query: 403 DI---IGP---NGRKRSYTLYQGHSGPV--YSASFSPLG---DFILSSSADTTIRLWST- 450
D IG G+K S T + + Y G + ++++S D T+ LW+
Sbjct: 331 DYALRIGAFDHTGKKPS-TPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWNPL 389
Query: 451 KLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDC 510
K + GH V V F+P G Y S+S D + ++W + + GH++ V
Sbjct: 390 KSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQ 449
Query: 511 VRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT 570
V W +C + + S D T+++WDV + + GH+ + ++ S DG+ + SG +D
Sbjct: 450 VAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKM 509
Query: 571 IMMW 574
+ +W
Sbjct: 510 VRLW 513
Score = 110 (43.8 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 23/85 (27%), Positives = 42/85 (49%)
Query: 408 NGRKRSY-TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPV 466
+GR + + ++GH VY ++S ++S S DTT+++W + V GH V
Sbjct: 430 DGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEV 489
Query: 467 WDVQFNPQGHYFASSSHDRTARIWS 491
+ V ++ G S D+ R+W+
Sbjct: 490 YTVDWSVDGKRVCSGGKDKMVRLWT 514
Score = 78 (32.5 bits), Expect = 6.6e-18, Sum P(2) = 6.6e-18
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 345 YTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGEN 396
+T +N + C S S DG ++A G D+++++WD K GQ + L+G +
Sbjct: 180 HTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWD-PKSGQ-CLGDALRGHS 229
Score = 38 (18.4 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 55 RTFSESEDGPARYQDEYSKLRSWTYS 80
R S S+DG + D S++ +T S
Sbjct: 250 RLASSSKDGTIKIWDTVSRVCQYTMS 275
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 270 (100.1 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 58/203 (28%), Positives = 97/203 (47%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
++Y + QGH G V S +F P ++ + SAD TI++W + GH V +
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAV 226
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+ + Y S+ D+ + W +++ + +R GHLS V C+ H + + TG D R+
Sbjct: 227 SNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRV 286
Query: 532 WDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSC 591
WD+ + + GH + + S+ P + +G D TI WDL G+ ++ L H
Sbjct: 287 WDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKS 346
Query: 592 VWTLAYSCEGSLLASGSADCTVK 614
V + + + AS SAD T K
Sbjct: 347 VRAMTLHPKENAFASASADNTKK 369
Score = 226 (84.6 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 74/297 (24%), Positives = 124/297 (41%)
Query: 345 YTFINTHNG-LNCASISQDGSLVAGGFSDSSLKVWDMA----KL---GQQAVSSGLQGEN 396
Y I H G + + G +D ++K+WD+A KL G GL N
Sbjct: 169 YRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSN 228
Query: 397 DTTPREDIIGPNGRKRSYTL--------YQGHSGPVYSASFSPLGDFILSSSADTTIRLW 448
T G + + + + L Y GH VY + P D +L+ D+ R+W
Sbjct: 229 RHTYMFSA-GDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVW 287
Query: 449 STKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDV 508
+ + GH+ V V P + SHD T + W + + + + H V
Sbjct: 288 DIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSV 347
Query: 509 DCVRWHINCNYIATGSSDKTVRLWDVSSGE-CVRIFIGHRSMILSLAMSPDGRYMASGDE 567
+ H N A+ S+D T + + + GE C + +++I ++A++ DG M +G +
Sbjct: 348 RAMTLHPKENAFASASADNTKK-FSLPKGEFCHNMLSQQKTIINAMAVNEDG-VMVTGGD 405
Query: 568 DGTIMMWDLASGRC-------VTP-LMGHTSCVWTLAYSCEGSLLASGSADCTVKLW 616
+G+I WD SG V P + + ++ Y GS L + AD T+K+W
Sbjct: 406 NGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMW 462
Score = 204 (76.9 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 45/160 (28%), Positives = 78/160 (48%)
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRI-MAGHLSDVDCVRWHINCN 518
+GH V V F+P +F + S DRT +IW + L++ + GH+ V +
Sbjct: 173 QGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDV-ATGVLKLTLTGHIEQVRGLAVSNRHT 231
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
Y+ + DK V+ WD+ + +R + GH S + LA+ P + +G D +WD+ +
Sbjct: 232 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRT 291
Query: 579 GRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
+ L GH + V ++ + +GS D T+K WD+
Sbjct: 292 KMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDL 331
Score = 201 (75.8 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 46/147 (31%), Positives = 74/147 (50%)
Query: 499 RIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPD 558
R++ GHL V V + + + TGS+D+T+++WDV++G GH + LA+S
Sbjct: 170 RVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNR 229
Query: 559 GRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
YM S +D + WDL + + GH S V+ LA +L +G D ++WD+
Sbjct: 230 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDI 289
Query: 619 TTSTKVLKTEEKSG-TNRLRSLKTLPT 644
T ++ SG N + S+ T PT
Sbjct: 290 RTKMQIFAL---SGHDNTVCSVFTRPT 313
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 270 (100.1 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 85/306 (27%), Positives = 142/306 (46%)
Query: 353 GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSG-------LQ--------GEND 397
G+ C + D + G D+S+K+WD + L V +G LQ G +D
Sbjct: 193 GVYC--LQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSD 250
Query: 398 TTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLV 457
+T R + N + TL H+ V FS +++ S D +I +W ++
Sbjct: 251 STVR--VWDVNTGEVLNTLIH-HNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDIT 305
Query: 458 CYK---GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
+ GH V V F+ + Y S+S DRT ++WS + +R + GH + C+++
Sbjct: 306 LRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 363
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
+ +GSSD T+RLWD+ G C+R+ GH ++ + D + + SG DG I +W
Sbjct: 364 DRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 419
Query: 575 DL---------ASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
DL AS C+ L+ H+ V+ L + E +++S S D T+ +WD
Sbjct: 420 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQIISS-SHDDTILIWDFLNVPPSA 477
Query: 626 KTEEKS 631
+ E +S
Sbjct: 478 QNETRS 483
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 250 (93.1 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 69/211 (32%), Positives = 104/211 (49%)
Query: 418 QGHSGPVYSASFSP-LGDFILSSSADTTIRLWS-TKLNANLVC----YKGHNYPVWDVQF 471
+GHSG V + +P D ILS+S D +I +W T+ N KGH++ V DV
Sbjct: 12 KGHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVVI 71
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+ G + S + D T R+W + R GH DV V + + I +GS DKT++L
Sbjct: 72 SSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKL 131
Query: 532 WDVSSGECVRIFI--GHRSMILSLAMSPDGR--YMASGDEDGTIMMWDLASGRCVTPLMG 587
W+ + G C GH + + SP+ + S D + +W+LA+ + T +G
Sbjct: 132 WN-TLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIG 190
Query: 588 HTSCVWTLAYSCEGSLLASGSADCTVKLWDV 618
HT + T+ S +GSL ASG D LWD+
Sbjct: 191 HTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 241 (89.9 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 61/204 (29%), Positives = 97/204 (47%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GHS V S G F LS + D T+RLW + GH V V F+
Sbjct: 60 KGHSHFVSDVVISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQ 119
Query: 478 FASSSHDRTARIWSMDRIQPLRIM-AGHLSDVDCVRWHINCN--YIATGSSDKTVRLWDV 534
S S D+T ++W+ + I GH V CVR+ N + I + DK V++W++
Sbjct: 120 IVSGSRDKTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNL 179
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
++ + IGH + ++ +SPDG ASG +DG M+WDL G+ + L +
Sbjct: 180 ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL-DSGDVINA 238
Query: 595 LAYSCEGSLLASGSADCTVKLWDV 618
L +S L + + ++K+WD+
Sbjct: 239 LCFSPNRYWLCAATGP-SIKIWDL 261
Score = 206 (77.6 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 60/197 (30%), Positives = 94/197 (47%)
Query: 460 KGHNYPVWDVQFNPQ-GHYFASSSHDRTARIWSMDRIQ-----PLRIMAGHLSDVDCVRW 513
KGH+ V + P+ S+S D++ +W + R + P R + GH V V
Sbjct: 12 KGHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVVI 71
Query: 514 HINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMM 573
+ + +G+ D T+RLWD+++G R F+GH +LS+A S D R + SG D TI +
Sbjct: 72 SSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKL 131
Query: 574 WDLASGRCVTPLM--GHTSCVWTLAYSCEGS--LLASGSADCTVKLWDVTTSTKVLKTEE 629
W+ G C + GHT V + +S S ++ S D VK+W++ LKT
Sbjct: 132 WNTL-GVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCK--LKTNH 188
Query: 630 KSGTNRLRSLKTLPTKS 646
T L ++ P S
Sbjct: 189 IGHTGYLNTVTVSPDGS 205
Score = 184 (69.8 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 40/135 (29%), Positives = 69/135 (51%)
Query: 520 IATGSSDKTVRLWDVSSGEC-----VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
I + S DK++ +W ++ E R GH + + +S DG++ SG DGT+ +W
Sbjct: 31 ILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVVISSDGQFALSGAWDGTLRLW 90
Query: 575 DLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTN 634
DL +G +GHT V ++A+S + + SGS D T+KLW+ K +++ T
Sbjct: 91 DLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYT-IQDEGHTE 149
Query: 635 RLRSLKTLPTKSTPV 649
+ ++ P S P+
Sbjct: 150 WVSCVRFSPNSSNPI 164
Score = 178 (67.7 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 58/220 (26%), Positives = 98/220 (44%)
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTK-LNANLVCYKGHNYPVWDVQFNPQG 475
+ GH+ V S +FS I+S S D TI+LW+T + + +GH V V+F+P
Sbjct: 101 FVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNS 160
Query: 476 H--YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
S D+ ++W++ + GH ++ V + + A+G D LWD
Sbjct: 161 SNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Query: 534 VSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT---- 589
++ G+ + + +I +L SP+ RY +I +WDL V L
Sbjct: 221 LNEGKHLYT-LDSGDVINALCFSPN-RYWLCAATGPSIKIWDLEGKIIVDELRQEVISTN 278
Query: 590 ------SCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTK 623
C +LA+S +G L +G D +++W VT T+
Sbjct: 279 SKAEPPQCT-SLAWSADGQTLFAGYTDNLIRVWQVTIGTR 317
Score = 53 (23.7 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 359 ISQDGSLVAGGFSDSSLKVWDM 380
IS DG G D +L++WD+
Sbjct: 71 ISSDGQFALSGAWDGTLRLWDL 92
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 250 (93.1 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 60/231 (25%), Positives = 107/231 (46%)
Query: 399 TPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVC 458
T D +G + TL +GH +Y+ + ++S+S D + +W + +
Sbjct: 34 TSNMDSVGRIQMRTRRTL-RGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHA 92
Query: 459 YKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMD----RIQPLRIMAGHLSDVDCVRWH 514
+ V + P G+Y A D I+++ ++ R + GH + C R+
Sbjct: 93 IPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRF- 151
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
++ + I T S D T LWD+ + + F GH ++SL++SPD R SG D + +W
Sbjct: 152 LDDSQIVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLW 211
Query: 575 DLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
D+ G C GH S + +++ G A+GS D T +L+D+ ++L
Sbjct: 212 DIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDLRADQELL 262
Score = 241 (89.9 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 60/203 (29%), Positives = 103/203 (50%)
Query: 419 GHSGPVYSASFSPLGDF-ILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH+G + F L D I++SS DTT LW + + GH+ V + +P
Sbjct: 141 GHTGYLSCCRF--LDDSQIVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSLSPDMRT 198
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
F S + D ++++W + + GH+SD++ V + N ATGS D T RL+D+ +
Sbjct: 199 FVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDLRAD 258
Query: 538 ECVRIFIGHRSMIL---SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWT 594
+ + ++ H ++I S+A S GR + +G +D +WD G L GH + V
Sbjct: 259 QELLLY-SHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGVLAGHDNRVSC 317
Query: 595 LAYSCEGSLLASGSADCTVKLWD 617
L + +G +A+GS D +++W+
Sbjct: 318 LGVTDDGMAVATGSWDSFLRIWN 340
Score = 140 (54.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 43/168 (25%), Positives = 75/168 (44%)
Query: 486 TARIWSMDRIQ--PLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIF 543
T+ + S+ RIQ R + GHL+ + + W + + + S D + +WD + +
Sbjct: 34 TSNMDSVGRIQMRTRRTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAI 93
Query: 544 IGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS--G--RCVTPLMGHTSCVWTLAYSC 599
S +++ A +P G Y+A G D +++L + G R L GHT + +
Sbjct: 94 PLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRF-L 152
Query: 600 EGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKST 647
+ S + + S D T LWD+ T+ + SG + SL P T
Sbjct: 153 DDSQIVTSSGDTTCALWDIETAQQTTTFTGHSGD--VMSLSLSPDMRT 198
Score = 137 (53.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 46/200 (23%), Positives = 82/200 (41%)
Query: 351 HNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGEN---DTTP--REDI 404
H G L+C D +V D++ +WD+ Q +G G+ +P R +
Sbjct: 142 HTGYLSCCRFLDDSQIVTSS-GDTTCALWDIETAQQTTTFTGHSGDVMSLSLSPDMRTFV 200
Query: 405 IGP-NGRKRSYTL--------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNAN 455
G + + + + + GH + + SF P G + S D T RL+ + +
Sbjct: 201 SGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDLRADQE 260
Query: 456 LVCYKGHNY--PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW 513
L+ Y N + V F+ G + D +W + ++AGH + V C+
Sbjct: 261 LLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGVLAGHDNRVSCLGV 320
Query: 514 HINCNYIATGSSDKTVRLWD 533
+ +ATGS D +R+W+
Sbjct: 321 TDDGMAVATGSWDSFLRIWN 340
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 280 (103.6 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 63/188 (33%), Positives = 105/188 (55%)
Query: 434 DFILSSSADTTIRLWSTKLNANLVCY---KGHNYPVWDVQFNPQGHYFASSSHDRTARIW 490
+ + + +D +IR++ K + N+ C KGH PV + +N Q Y S S D + ++W
Sbjct: 471 NLLFTGCSDNSIRVYDYK-SQNMECVQTLKGHEGPVESICYNDQ--YLFSGSSDHSIKVW 527
Query: 491 SMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMI 550
+ +++ + + GH V V +N Y+ +GSSDKT+++WD+ + EC H +
Sbjct: 528 DLKKLRCIFTLEGHDKPVHTVL--LNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAV 585
Query: 551 LSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSAD 610
+L +S G+Y+ SG D TI +WDL + RC L GHT V T+ G+ L SGS D
Sbjct: 586 KTLCIS--GQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICIL--GTNLYSGSYD 641
Query: 611 CTVKLWDV 618
T+++W++
Sbjct: 642 KTIRVWNL 649
Score = 268 (99.4 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 62/203 (30%), Positives = 105/203 (51%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH GPV S ++ ++ S S+D +I++W K + +GH+ PV V N + Y
Sbjct: 499 KGHEGPVESICYND--QYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLNDK--Y 554
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
S S D+T ++W + ++ + H V + I+ Y+ +GS+DKT+++WD+ +
Sbjct: 555 LFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLC--ISGQYLFSGSNDKTIKVWDLKTF 612
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY 597
C GH + ++ + G + SG D TI +W+L S C L GH V +
Sbjct: 613 RCNYTLKGHTKWVTTICIL--GTNLYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVI 670
Query: 598 SCEGSLLASGSADCTVKLWDVTT 620
C+ LL + S D T+K+WD+ T
Sbjct: 671 -CD-KLLFTASDDNTIKIWDLET 691
Score = 227 (85.0 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 70/267 (26%), Positives = 126/267 (47%)
Query: 364 SLVAGGFSDSSLKVWDMAKLGQQAVSS--GLQGENDTTPRED---IIGPNGR-------K 411
+L+ G SD+S++V+D + V + G +G ++ D G + K
Sbjct: 471 NLLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICYNDQYLFSGSSDHSIKVWDLK 530
Query: 412 RSYTLY--QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
+ ++ +GH PV++ + ++ S S+D TI++W K + H V +
Sbjct: 531 KLRCIFTLEGHDKPVHTVLLND--KYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTL 588
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
+ G Y S S+D+T ++W + + + GH V + + N + +GS DKT+
Sbjct: 589 CIS--GQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTI-CILGTN-LYSGSYDKTI 644
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
R+W++ S EC GH + + + + AS +D TI +WDL + RC T L GH
Sbjct: 645 RVWNLKSLECSATLRGHDRWVEHMVICDKLLFTAS--DDNTIKIWDLETLRCNTTLEGHN 702
Query: 590 SCVWTLAYSCEGSLLASGSADCTVKLW 616
+ V LA + + S S D ++++W
Sbjct: 703 ATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 192 (72.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 43/139 (30%), Positives = 74/139 (53%)
Query: 484 DRTARIWSM--DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVR 541
D + R++ ++ ++ + GH V+ + + N Y+ +GSSD ++++WD+ C+
Sbjct: 479 DNSIRVYDYKSQNMECVQTLKGHEGPVESICY--NDQYLFSGSSDHSIKVWDLKKLRCIF 536
Query: 542 IFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEG 601
GH + ++ ++ +Y+ SG D TI +WDL + C L H V TL S G
Sbjct: 537 TLEGHDKPVHTVLLND--KYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCIS--G 592
Query: 602 SLLASGSADCTVKLWDVTT 620
L SGS D T+K+WD+ T
Sbjct: 593 QYLFSGSNDKTIKVWDLKT 611
Score = 189 (71.6 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 68/243 (27%), Positives = 108/243 (44%)
Query: 351 HNGLNCASISQDGSLVAGGFSDSSLKVWDMAKL-------GQ-QAVSSGL-------QGE 395
H G SI + + G SD S+KVWD+ KL G + V + L G
Sbjct: 501 HEG-PVESICYNDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLNDKYLFSGS 559
Query: 396 NDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNAN 455
+D T + + + YTL + H+ V + S G ++ S S D TI++W K
Sbjct: 560 SDKTIK--VWDLKTLECKYTL-ESHARAVKTLCIS--GQYLFSGSNDKTIKVWDLKTFRC 614
Query: 456 LVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW-- 513
KGH W G S S+D+T R+W++ ++ + GH D RW
Sbjct: 615 NYTLKGHTK--WVTTICILGTNLYSGSYDKTIRVWNLKSLECSATLRGH--D----RWVE 666
Query: 514 H-INCNYIA-TGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTI 571
H + C+ + T S D T+++WD+ + C GH + + LA+ D + + S D +I
Sbjct: 667 HMVICDKLLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSI 726
Query: 572 MMW 574
+W
Sbjct: 727 RVW 729
Score = 40 (19.1 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 14/56 (25%), Positives = 20/56 (35%)
Query: 20 SEAENALQAEIQRNKSSNNTNPIDILNDPELSKFFRTFSESEDGPARYQDEYSKLR 75
SE +N N ++NN N N+ S ++ E G D S R
Sbjct: 351 SERDNNNNNNNNNNNNNNNNNNNSNNNNNNNSSISKSLVEISSGSKERNDRDSPSR 406
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 270 (100.1 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 85/306 (27%), Positives = 142/306 (46%)
Query: 353 GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSG-------LQ--------GEND 397
G+ C + D + G D+S+K+WD + L V +G LQ G +D
Sbjct: 227 GVYC--LQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSD 284
Query: 398 TTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLV 457
+T R + N + TL H+ V FS +++ S D +I +W ++
Sbjct: 285 STVR--VWDVNTGEVLNTLIH-HNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDIT 339
Query: 458 CYK---GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
+ GH V V F+ + Y S+S DRT ++WS + +R + GH + C+++
Sbjct: 340 LRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 397
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
+ +GSSD T+RLWD+ G C+R+ GH ++ + D + + SG DG I +W
Sbjct: 398 DRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 453
Query: 575 DL---------ASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
DL AS C+ L+ H+ V+ L + E +++S S D T+ +WD
Sbjct: 454 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQIISS-SHDDTILIWDFLNVPPSA 511
Query: 626 KTEEKS 631
+ E +S
Sbjct: 512 QNETRS 517
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 274 (101.5 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 62/219 (28%), Positives = 107/219 (48%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQ 474
TL Q H GP+++ ++ G++ILS+ D T +W + H+ P DV +
Sbjct: 274 TLGQ-HKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-N 331
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDV 534
FAS S D + + +P++ GH ++V+ ++W + +A+ S D T+++W +
Sbjct: 332 NTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM 391
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGR---------YMASGDEDGTIMMWDLASGRCVTPL 585
CV H I ++ SP G +AS D T+ +WD+ G C+ L
Sbjct: 392 KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTL 451
Query: 586 MGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
H V+++A+S +G LASGS D V +W+ + + V
Sbjct: 452 TKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLV 490
Score = 254 (94.5 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 72/244 (29%), Positives = 115/244 (47%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNAN-----LV---CYK--GHNY 464
T+ +GH V+ +++P+ D + S S D+T R+W+ N+N LV C + GH+
Sbjct: 176 TVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDV 235
Query: 465 P----VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
P V + +N G A+ S+D ARIW+ D + H + ++W+ NYI
Sbjct: 236 PSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDG-NLASTLGQHKGPIFALKWNKKGNYI 294
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
+ DKT +WD +GE + F H + L + + + AS D I + L R
Sbjct: 295 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVCRLGCDR 353
Query: 581 CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLK 640
V GHT+ V + + G LLAS S D T+K+W + V + S + ++K
Sbjct: 354 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHS--KEIYTIK 411
Query: 641 TLPT 644
PT
Sbjct: 412 WSPT 415
Score = 252 (93.8 bits), Expect = 9.3e-18, Sum P(2) = 9.3e-18
Identities = 60/208 (28%), Positives = 102/208 (49%)
Query: 420 HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFA 479
HS P + F S S D I + + + ++GH V ++++P G A
Sbjct: 320 HSAPALDVDWQNNTTFA-SCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLA 378
Query: 480 SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW--------HINCNY-IATGSSDKTVR 530
S S D T +IWSM + + + H ++ ++W + N N +A+ S D TVR
Sbjct: 379 SCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVR 438
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
LWDV G C+ H+ + S+A SPDG+Y+ASG D + +W+ SG V G T
Sbjct: 439 LWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRG-TG 497
Query: 591 CVWTLAYSCEGSLLASGSADCTVKLWDV 618
++ + ++ G + + ++D +V + D+
Sbjct: 498 GIFEVCWNARGDKVGASASDGSVCVLDL 525
Score = 228 (85.3 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 92/368 (25%), Positives = 159/368 (43%)
Query: 273 KQGASIKKLKKDKAINATAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRNRV 332
+Q A +KL + +A NA A + A STA P A P + ++ + N
Sbjct: 95 RQQAFREKLAQQQA-NAAAAAAAAAATATSTAATT-PAAAAQQNPPKNGEATVNGEENGA 152
Query: 333 H-LSSAALPSV---------SFYTFINTHNG--LNCASISQDGSLVAGGFSDSSLKVWDM 380
H +++ + P S T + H CA + L+A G DS+ ++W+
Sbjct: 153 HAINNHSKPMEIDGDVEIPPSKATVLRGHESEVFICAW-NPVSDLLASGSGDSTARIWN- 210
Query: 381 AKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSS 440
L + S+G G R I R+ + + V S ++ G + + S
Sbjct: 211 --LNEN--SNG--GSTQLVLRHCI-----REGGHDVPSNKD--VTSLDWNSDGTLLATGS 257
Query: 441 ADTTIRLWSTKLNANLVCYKG-HNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLR 499
D R+W+ + NL G H P++ +++N +G+Y S+ D+T IW + +
Sbjct: 258 YDGFARIWTE--DGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQ 315
Query: 500 IMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDG 559
H + V W N + A+ S+D + + + V+ F GH + + ++ P G
Sbjct: 316 QFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSG 374
Query: 560 RYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS---------LLASGSAD 610
+AS +D T+ +W + CV L H+ ++T+ +S G +LAS S D
Sbjct: 375 MLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFD 434
Query: 611 CTVKLWDV 618
TV+LWDV
Sbjct: 435 STVRLWDV 442
Score = 197 (74.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 48/177 (27%), Positives = 86/177 (48%)
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
G R +QGH+ V + + P G + S S D T+++WS K +A + + H+ ++
Sbjct: 350 GCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYT 409
Query: 469 VQFNPQGH---------YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
++++P G AS+S D T R+W ++R + + H V V + + Y
Sbjct: 410 IKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKY 469
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
+A+GS DK V +W+ SG V + G I + + G + + DG++ + DL
Sbjct: 470 LASGSFDKCVHIWNTQSGSLVHSYRGTGG-IFEVCWNARGDKVGASASDGSVCVLDL 525
Score = 39 (18.8 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 7 VEF-VATYLKKKGFSEAENALQAEIQRNKSSNNTN 40
V F V YL++ GFS + A I+ + S +N N
Sbjct: 8 VNFLVYRYLQESGFSHS--AFTFGIESHISQSNIN 40
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 274 (101.5 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 62/219 (28%), Positives = 107/219 (48%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQ 474
TL Q H GP+++ ++ G++ILS+ D T +W + H+ P DV +
Sbjct: 274 TLGQ-HKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-N 331
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDV 534
FAS S D + + +P++ GH ++V+ ++W + +A+ S D T+++W +
Sbjct: 332 NTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM 391
Query: 535 SSGECVRIFIGHRSMILSLAMSPDGR---------YMASGDEDGTIMMWDLASGRCVTPL 585
CV H I ++ SP G +AS D T+ +WD+ G C+ L
Sbjct: 392 KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTL 451
Query: 586 MGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKV 624
H V+++A+S +G LASGS D V +W+ + + V
Sbjct: 452 TKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLV 490
Score = 254 (94.5 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 72/244 (29%), Positives = 115/244 (47%)
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNAN-----LV---CYK--GHNY 464
T+ +GH V+ +++P+ D + S S D+T R+W+ N+N LV C + GH+
Sbjct: 176 TVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDV 235
Query: 465 P----VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
P V + +N G A+ S+D ARIW+ D + H + ++W+ NYI
Sbjct: 236 PSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDG-NLASTLGQHKGPIFALKWNKKGNYI 294
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
+ DKT +WD +GE + F H + L + + + AS D I + L R
Sbjct: 295 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVCRLGCDR 353
Query: 581 CVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLK 640
V GHT+ V + + G LLAS S D T+K+W + V + S + ++K
Sbjct: 354 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHS--KEIYTIK 411
Query: 641 TLPT 644
PT
Sbjct: 412 WSPT 415
Score = 252 (93.8 bits), Expect = 9.3e-18, Sum P(2) = 9.3e-18
Identities = 60/208 (28%), Positives = 102/208 (49%)
Query: 420 HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFA 479
HS P + F S S D I + + + ++GH V ++++P G A
Sbjct: 320 HSAPALDVDWQNNTTFA-SCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLA 378
Query: 480 SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW--------HINCNY-IATGSSDKTVR 530
S S D T +IWSM + + + H ++ ++W + N N +A+ S D TVR
Sbjct: 379 SCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVR 438
Query: 531 LWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTS 590
LWDV G C+ H+ + S+A SPDG+Y+ASG D + +W+ SG V G T
Sbjct: 439 LWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRG-TG 497
Query: 591 CVWTLAYSCEGSLLASGSADCTVKLWDV 618
++ + ++ G + + ++D +V + D+
Sbjct: 498 GIFEVCWNARGDKVGASASDGSVCVLDL 525
Score = 228 (85.3 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 92/368 (25%), Positives = 159/368 (43%)
Query: 273 KQGASIKKLKKDKAINATAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRNRV 332
+Q A +KL + +A NA A + A STA P A P + ++ + N
Sbjct: 95 RQQAFREKLAQQQA-NAAAAAAAAAATATSTAATT-PAAAAQQNPPKNGEATVNGEENGA 152
Query: 333 H-LSSAALPSV---------SFYTFINTHNG--LNCASISQDGSLVAGGFSDSSLKVWDM 380
H +++ + P S T + H CA + L+A G DS+ ++W+
Sbjct: 153 HAINNHSKPMEIDGDVEIPPSKATVLRGHESEVFICAW-NPVSDLLASGSGDSTARIWN- 210
Query: 381 AKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSS 440
L + S+G G R I R+ + + V S ++ G + + S
Sbjct: 211 --LNEN--SNG--GSTQLVLRHCI-----REGGHDVPSNKD--VTSLDWNSDGTLLATGS 257
Query: 441 ADTTIRLWSTKLNANLVCYKG-HNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLR 499
D R+W+ + NL G H P++ +++N +G+Y S+ D+T IW + +
Sbjct: 258 YDGFARIWTE--DGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQ 315
Query: 500 IMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDG 559
H + V W N + A+ S+D + + + V+ F GH + + ++ P G
Sbjct: 316 QFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSG 374
Query: 560 RYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGS---------LLASGSAD 610
+AS +D T+ +W + CV L H+ ++T+ +S G +LAS S D
Sbjct: 375 MLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFD 434
Query: 611 CTVKLWDV 618
TV+LWDV
Sbjct: 435 STVRLWDV 442
Score = 197 (74.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 48/177 (27%), Positives = 86/177 (48%)
Query: 409 GRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
G R +QGH+ V + + P G + S S D T+++WS K +A + + H+ ++
Sbjct: 350 GCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYT 409
Query: 469 VQFNPQGH---------YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
++++P G AS+S D T R+W ++R + + H V V + + Y
Sbjct: 410 IKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKY 469
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
+A+GS DK V +W+ SG V + G I + + G + + DG++ + DL
Sbjct: 470 LASGSFDKCVHIWNTQSGSLVHSYRGTGG-IFEVCWNARGDKVGASASDGSVCVLDL 525
Score = 39 (18.8 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 7 VEF-VATYLKKKGFSEAENALQAEIQRNKSSNNTN 40
V F V YL++ GFS + A I+ + S +N N
Sbjct: 8 VNFLVYRYLQESGFSHS--AFTFGIESHISQSNIN 40
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 270 (100.1 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 85/306 (27%), Positives = 142/306 (46%)
Query: 353 GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSG-------LQ--------GEND 397
G+ C + D + G D+S+K+WD + L V +G LQ G +D
Sbjct: 242 GVYC--LQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSD 299
Query: 398 TTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLV 457
+T R + N + TL H+ V FS +++ S D +I +W ++
Sbjct: 300 STVR--VWDVNTGEVLNTLIH-HNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDIT 354
Query: 458 CYK---GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
+ GH V V F+ + Y S+S DRT ++WS + +R + GH + C+++
Sbjct: 355 LRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 412
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
+ +GSSD T+RLWD+ G C+R+ GH ++ + D + + SG DG I +W
Sbjct: 413 DRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 468
Query: 575 DL---------ASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
DL AS C+ L+ H+ V+ L + E +++S S D T+ +WD
Sbjct: 469 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQIISS-SHDDTILIWDFLNVPPSA 526
Query: 626 KTEEKS 631
+ E +S
Sbjct: 527 QNETRS 532
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 269 (99.8 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 85/306 (27%), Positives = 141/306 (46%)
Query: 353 GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSG-------LQ--------GEND 397
G+ C + D + G D+S+K+WD L V +G LQ G +D
Sbjct: 210 GVYC--LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSD 267
Query: 398 TTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLV 457
+T R + N + TL H+ V FS +++ S D +I +W ++
Sbjct: 268 STVR--VWDVNTGEVLNTLIH-HNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDIT 322
Query: 458 CYK---GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
+ GH V V F+ + Y S+S DRT ++WS + +R + GH + C+++
Sbjct: 323 LRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 380
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
+ +GSSD T+RLWD+ G C+R+ GH ++ + D + + SG DG I +W
Sbjct: 381 DRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 436
Query: 575 DL---------ASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
DL AS C+ L+ H+ V+ L + E +++S S D T+ +WD
Sbjct: 437 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQIISS-SHDDTILIWDFLNVPPSA 494
Query: 626 KTEEKS 631
+ E +S
Sbjct: 495 QNETRS 500
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 269 (99.8 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 85/306 (27%), Positives = 141/306 (46%)
Query: 353 GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSG-------LQ--------GEND 397
G+ C + D + G D+S+K+WD L V +G LQ G +D
Sbjct: 210 GVYC--LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSD 267
Query: 398 TTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLV 457
+T R + N + TL H+ V FS +++ S D +I +W ++
Sbjct: 268 STVR--VWDVNTGEVLNTLIH-HNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDIT 322
Query: 458 CYK---GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
+ GH V V F+ + Y S+S DRT ++WS + +R + GH + C+++
Sbjct: 323 LRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 380
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
+ +GSSD T+RLWD+ G C+R+ GH ++ + D + + SG DG I +W
Sbjct: 381 DRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 436
Query: 575 DL---------ASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
DL AS C+ L+ H+ V+ L + E +++S S D T+ +WD
Sbjct: 437 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQIISS-SHDDTILIWDFLNVPPSA 494
Query: 626 KTEEKS 631
+ E +S
Sbjct: 495 QNETRS 500
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 269 (99.8 bits), Expect = 3.3e-20, P = 3.3e-20
Identities = 85/306 (27%), Positives = 141/306 (46%)
Query: 353 GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSG-------LQ--------GEND 397
G+ C + D + G D+S+K+WD L V +G LQ G +D
Sbjct: 229 GVYC--LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSD 286
Query: 398 TTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLV 457
+T R + N + TL H+ V FS +++ S D +I +W ++
Sbjct: 287 STVR--VWDVNTGEVLNTLIH-HNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDIT 341
Query: 458 CYK---GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
+ GH V V F+ + Y S+S DRT ++WS + +R + GH + C+++
Sbjct: 342 LRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 399
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
+ +GSSD T+RLWD+ G C+R+ GH ++ + D + + SG DG I +W
Sbjct: 400 DRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 455
Query: 575 DL---------ASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
DL AS C+ L+ H+ V+ L + E +++S S D T+ +WD
Sbjct: 456 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQIISS-SHDDTILIWDFLNVPPSA 513
Query: 626 KTEEKS 631
+ E +S
Sbjct: 514 QNETRS 519
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 269 (99.8 bits), Expect = 3.3e-20, P = 3.3e-20
Identities = 85/306 (27%), Positives = 141/306 (46%)
Query: 353 GLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSG-------LQ--------GEND 397
G+ C + D + G D+S+K+WD L V +G LQ G +D
Sbjct: 230 GVYC--LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSD 287
Query: 398 TTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLV 457
+T R + N + TL H+ V FS +++ S D +I +W ++
Sbjct: 288 STVR--VWDVNTGEVLNTLIH-HNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDIT 342
Query: 458 CYK---GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
+ GH V V F+ + Y S+S DRT ++WS + +R + GH + C+++
Sbjct: 343 LRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR 400
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
+ +GSSD T+RLWD+ G C+R+ GH ++ + D + + SG DG I +W
Sbjct: 401 DRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 456
Query: 575 DL---------ASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVL 625
DL AS C+ L+ H+ V+ L + E +++S S D T+ +WD
Sbjct: 457 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQIISS-SHDDTILIWDFLNVPPSA 514
Query: 626 KTEEKS 631
+ E +S
Sbjct: 515 QNETRS 520
WARNING: HSPs involving 1617 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 656 656 0.00096 120 3 11 22 0.42 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1867
No. of states in DFA: 619 (66 KB)
Total size of DFA: 370 KB (2182 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 67.34u 0.15s 67.49t Elapsed: 00:00:04
Total cpu time: 67.48u 0.15s 67.63t Elapsed: 00:00:04
Start: Tue May 21 05:23:54 2013 End: Tue May 21 05:23:58 2013
WARNINGS ISSUED: 2