Query 006224
Match_columns 656
No_of_seqs 324 out of 1876
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 19:19:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006224.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006224hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3abz_A Beta-glucosidase I; gly 100.0 5E-138 2E-142 1210.3 52.0 572 4-651 60-834 (845)
2 3zyz_A Beta-D-glucoside glucoh 100.0 9E-138 3E-142 1192.2 51.6 587 4-652 71-711 (713)
3 2x41_A Beta-glucosidase; hydro 100.0 3E-136 1E-140 1186.2 48.6 567 4-651 77-711 (721)
4 3rrx_A EXO-1,3/1,4-beta-glucan 100.0 9E-106 3E-110 926.4 38.8 459 3-516 119-619 (822)
5 1x38_A Beta-D-glucan exohydrol 100.0 6E-104 2E-108 899.1 39.4 458 4-511 105-601 (602)
6 3bmx_A Uncharacterized lipopro 100.0 5.6E-94 1.9E-98 821.8 36.9 439 6-513 136-640 (642)
7 3sql_A Glycosyl hydrolase fami 100.0 2E-67 6.9E-72 582.5 29.9 391 4-454 102-523 (535)
8 3tev_A Glycosyl hyrolase, fami 100.0 4.2E-56 1.4E-60 471.5 20.3 230 4-254 91-340 (351)
9 4gvf_A Beta-hexosaminidase; TI 100.0 1.2E-48 3.9E-53 413.3 13.7 223 4-245 74-315 (349)
10 2oxn_A Beta-hexosaminidase; TI 100.0 1.2E-48 4E-53 412.7 11.0 220 4-245 74-309 (340)
11 4g6c_A Beta-hexosaminidase 1; 100.0 6.5E-48 2.2E-52 407.9 14.1 219 4-244 84-322 (348)
12 3idu_A Uncharacterized protein 96.7 0.0042 1.4E-07 55.8 7.8 50 556-614 34-84 (127)
13 2kut_A Uncharacterized protein 96.1 0.0032 1.1E-07 56.0 3.6 55 556-614 17-73 (122)
14 2l0d_A Cell surface protein; s 95.8 0.028 9.7E-07 49.3 8.0 61 556-638 20-82 (114)
15 3isy_A Bsupi, intracellular pr 93.0 0.38 1.3E-05 42.4 8.6 68 556-638 19-99 (120)
16 1w8o_A Bacterial sialidase; 3D 86.9 0.95 3.2E-05 50.8 7.4 104 499-642 337-442 (601)
17 4ep8_B Urease subunit beta; al 86.3 1.1 3.7E-05 37.7 5.3 52 557-612 20-83 (101)
18 1yew_A Particulate methane mon 86.0 1.5 5.1E-05 45.4 7.5 55 556-614 265-336 (382)
19 2e6j_A Hydin protein; PAPD, st 84.9 2.8 9.6E-05 35.7 7.8 61 556-622 27-87 (112)
20 2x3c_A Toxic extracellular end 84.8 1 3.5E-05 47.1 5.8 62 556-619 37-116 (343)
21 1cuo_A Protein (azurin ISO-2); 83.7 1.7 5.9E-05 38.7 6.0 15 599-613 86-100 (129)
22 4ac7_B Urease subunit beta; hy 82.3 2.2 7.5E-05 37.3 5.8 52 557-612 26-89 (126)
23 4ubp_B Protein (urease (chain 82.3 2.2 7.5E-05 37.3 5.8 52 557-612 26-89 (126)
24 3fsa_A Azurin; copper, cupredo 79.4 3.4 0.00012 36.6 6.2 55 558-613 28-100 (125)
25 2ys4_A Hydrocephalus-inducing 76.4 4.7 0.00016 35.1 6.3 58 556-624 42-99 (122)
26 3rfr_A PMOB; membrane, oxidore 75.7 4.4 0.00015 42.4 6.6 54 556-614 299-368 (419)
27 3qbt_B Inositol polyphosphate 74.2 4.8 0.00017 36.2 5.9 55 556-614 44-100 (140)
28 3ay2_A Lipid modified azurin p 72.8 3.4 0.00012 38.5 4.6 24 599-623 125-151 (167)
29 2ccw_A Azurin II, AZN-2; elect 65.1 11 0.00036 33.4 6.0 25 599-623 86-113 (129)
30 3qga_A UREA2, fusion of urease 64.9 7.1 0.00024 37.5 4.9 52 557-612 125-188 (225)
31 3kmh_A D-lyxose isomerase; cup 64.3 4.7 0.00016 39.5 3.7 46 563-614 131-186 (246)
32 1nwp_A Azurin; electron transp 64.3 11 0.00039 33.2 6.0 25 599-623 86-113 (128)
33 1e9y_A Urease subunit alpha; h 61.6 7.8 0.00027 37.5 4.6 51 558-612 126-188 (238)
34 4dzg_A PLIG; lysozyme inhibito 60.0 10 0.00036 32.8 4.8 43 599-641 35-95 (114)
35 2iaa_C Azurin; quinoprotein, t 57.7 14 0.00049 32.6 5.4 25 599-623 85-112 (128)
36 2aan_A Auracyanin A; cupredoxi 55.8 29 0.001 30.5 7.3 18 597-614 98-115 (139)
37 1xf1_A C5A peptidase, SCP; hyd 55.7 8 0.00027 45.9 4.5 58 556-614 500-564 (926)
38 2qsv_A Uncharacterized protein 50.5 18 0.00062 34.8 5.4 50 556-614 135-185 (220)
39 2lv4_A Putative outer membrane 47.9 35 0.0012 29.8 6.0 65 588-653 48-134 (146)
40 2qsv_A Uncharacterized protein 41.4 49 0.0017 31.7 6.8 48 556-618 20-72 (220)
41 2cal_A Rusticyanin; iron respi 38.9 56 0.0019 29.5 6.4 54 558-612 70-128 (154)
42 3qis_A Inositol polyphosphate 38.6 61 0.0021 33.8 7.5 55 556-614 47-103 (366)
43 4gy7_A Urease; JACK bean, hydr 36.9 29 0.00099 40.6 5.1 51 557-611 151-213 (840)
44 4hci_A Cupredoxin 1; structura 36.8 62 0.0021 26.5 5.9 41 558-614 37-77 (100)
45 1iby_A Nitrosocyanin; RED copp 36.0 38 0.0013 28.4 4.6 41 558-614 47-87 (112)
46 4ay0_A Chaperone protein CAF1M 33.6 84 0.0029 30.2 7.1 52 558-614 29-84 (218)
47 4hs4_A Chromate reductase; tri 31.5 71 0.0024 30.0 6.1 53 354-417 63-120 (199)
48 4g9s_B Inhibitor of G-type lys 31.4 77 0.0026 26.8 5.7 25 628-652 78-111 (111)
49 3q48_A Chaperone CUPB2; IG fol 31.2 1.2E+02 0.004 30.0 7.9 54 558-613 45-102 (257)
50 4h7p_A Malate dehydrogenase; s 30.8 19 0.00066 37.4 2.1 56 360-421 96-155 (345)
51 2x0j_A Malate dehydrogenase; o 29.0 16 0.00055 37.1 1.0 55 361-422 66-124 (294)
52 3lcm_A SMU.1420, putative oxid 28.2 92 0.0031 29.0 6.3 55 353-418 62-131 (196)
53 5mdh_A Malate dehydrogenase; o 26.8 43 0.0015 34.4 3.9 57 359-421 74-134 (333)
54 1g43_A Scaffolding protein; be 26.0 24 0.00083 32.4 1.6 34 593-627 97-132 (160)
55 3hrz_B Cobra venom factor; ser 25.6 1.1E+02 0.0038 30.0 6.5 56 556-614 97-154 (252)
56 3vku_A L-LDH, L-lactate dehydr 25.5 34 0.0012 35.2 2.7 57 360-421 72-130 (326)
57 1oju_A MDH, malate dehydrogena 24.6 21 0.00073 36.1 1.0 57 360-421 65-123 (294)
58 1rli_A Trp repressor binding p 24.5 1.3E+02 0.0044 27.0 6.5 38 354-402 61-98 (184)
59 3p0r_A Azoreductase; structura 24.5 89 0.0031 29.5 5.4 54 355-419 83-151 (211)
60 3ldh_A Lactate dehydrogenase; 24.2 45 0.0016 34.3 3.4 54 362-422 87-144 (330)
61 4b9f_A Cellulosomal-scaffoldin 23.8 38 0.0013 30.8 2.4 35 593-628 94-128 (152)
62 3zqx_A Cellulose 1,4-beta-cell 23.6 18 0.00063 32.7 0.3 35 593-628 81-116 (146)
63 7mdh_A Protein (malate dehydro 22.7 33 0.0011 36.0 2.1 58 359-422 103-164 (375)
64 3ha2_A NADPH-quinone reductase 22.0 1.6E+02 0.0054 27.1 6.5 57 352-419 39-105 (177)
65 2hpv_A FMN-dependent NADH-azor 21.9 1.1E+02 0.0036 28.5 5.4 38 354-402 84-121 (208)
66 3u7i_A FMN-dependent NADH-azor 21.5 1.2E+02 0.004 29.0 5.7 38 355-403 85-122 (223)
67 1t5b_A Acyl carrier protein ph 20.8 1.2E+02 0.0043 27.6 5.6 36 356-402 78-113 (201)
68 4djm_A DRAB; chaperone, PILI; 20.7 2E+02 0.0068 28.0 7.2 51 558-613 39-91 (239)
69 3nep_X Malate dehydrogenase; h 20.7 26 0.0009 35.8 0.8 58 360-422 65-124 (314)
70 3sd2_A Putative member of DUF3 20.6 3E+02 0.01 23.1 7.1 11 558-568 46-58 (101)
71 2q3z_A Transglutaminase 2; tra 20.3 85 0.0029 35.6 4.8 57 556-614 488-548 (687)
72 2gim_A Plastocyanin; beta shee 20.1 1E+02 0.0035 25.1 4.3 18 595-612 62-79 (106)
No 1
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=100.00 E-value=5.1e-138 Score=1210.26 Aligned_cols=572 Identities=30% Similarity=0.447 Sum_probs=499.7
Q ss_pred cCCCCCChHHHH--------HHHHHHHHHHHHhhhcCCCccceeeCccccccCCCCCCccccccCCCHHHHHHHHHHHHH
Q 006224 4 NLPPFYCSICLD--------TRQLYVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVR 75 (656)
Q Consensus 4 ~~~~~P~~~~la--------~~~g~~~a~E~ra~~~~Gi~~~~~laP~vdi~r~p~~gr~~e~fgeDP~l~~~~a~a~v~ 75 (656)
++|.||++++|| +++|+++|+|+|++ |+ +++| ||++||.|||+|||++|||||||+|+++||.|+|+
T Consensus 60 ~~t~fP~~~~laat~d~~l~~~~g~~~g~E~ra~---Gi-~~~l-aP~vdi~r~P~~gR~~EsfgeDP~lv~~~a~a~v~ 134 (845)
T 3abz_A 60 PSGCFPNGTGLASTFDRDLLETAGKLMAKESIAK---NA-AVIL-GPTTNMQRGPLGGRGFESFSEDPYLAGMATSSVVK 134 (845)
T ss_dssp CBCCCCCHHHHHHTCCHHHHHHHHHHHHHHHHHT---TC-SEEE-CCBCCCCSSTTCTTGGGSCCSSHHHHHHHHHHHHH
T ss_pred CcCcCcCHHHHHhcCCHHHHHHHHHHHHHHHHHc---CC-CEEe-cceECCCcCCCCCcccccCCCCHHHHHHHHHHHHH
Confidence 479999999987 89999999999999 77 6665 99999999999999999999999999999999999
Q ss_pred HHccCCCCCCceEEeeccccccCCCCCCCCCccccccccCHHHHHhhccHHHHHHHHcCCcceEeeccccCCCcccccCH
Q 006224 76 GLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADP 155 (656)
Q Consensus 76 G~Q~~~~~~~gV~a~~KHF~g~g~~~~~~~~r~~~~~~~~~~~L~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~ 155 (656)
|||+. ||+||+|||||||++ .+|+..++.+++++|+|+||+||+++|+++++.+||||||++||+|||+|+
T Consensus 135 GlQ~~-----gV~a~~KHFpg~g~e----~~r~~~~~~v~~~~L~e~~L~PF~~ai~~ag~~~VM~syn~ing~pa~~s~ 205 (845)
T 3abz_A 135 GMQGE-----GIAATVKHFVCNDLE----DQRFSSNSIVSERALREIYLEPFRLAVKHANPVCIMTAYNKVNGEHCSQSK 205 (845)
T ss_dssp HHHHT-----TCBCEEEEETTCCCC----TTTTTCEEECCHHHHHHTTSHHHHHHHHHHCCSEEEECSSEETTEEGGGCH
T ss_pred HHhhC-----CeeEEeeccccCCcc----cCCccccCCCCHHHHHHhhHHHHHHHHHhcCCCEEEecCCCcCCEeccCCH
Confidence 99998 899999999999975 357777889999999999999999999755599999999999999999999
Q ss_pred HHHHHhhhhcCCCCcEEEcChhhhhhhhccccccCChHHHHHHHHHcCCCcCCch---hhH-HHHHHHHHCCC-CCHHHH
Q 006224 156 DILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGP---FLA-IHTEGAVRGGL-LREEDV 230 (656)
Q Consensus 156 ~ll~~lLR~e~gf~G~v~SD~~~~~~~~~~~~~~~~~~e~~~~al~AG~D~~~~~---~~~-~~l~~av~~g~-v~~~~l 230 (656)
+||++|||+||||+|+|||||+++. ++++|++||+||+|+. ++. +.|.+||++|+ +++++|
T Consensus 206 ~ll~~lLR~e~GF~G~VvSD~~~~~--------------~~~~Al~AG~D~~m~~~~~~~~~~~l~~av~~G~~i~~~~i 271 (845)
T 3abz_A 206 KLLIDILRDEWKWDGMLMSDWFGTY--------------TTAAAIKNGLDIEFPGPTRWRTRALVSHSLNSREQITTEDV 271 (845)
T ss_dssp HHHTCCCCCCTCCCSEEECCTTCCC--------------CSHHHHHHTCCBBCSSSCSSCCHHHHHHHHHTTCSCCHHHH
T ss_pred HHHHHHHhhccCCCeEEEcccccHH--------------HHHHHHHcCCCcccCCchhhhHHHHHHHHHHcCccchHHHH
Confidence 9999999999999999999998762 2478999999999962 223 38999999999 999999
Q ss_pred HHHhhhhHHHHHHhc----CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHhhcceecccCCCCCCCcCCCCcEEEEEcc
Q 006224 231 NLALAYTITVQMRLG----MFDGEPSAQPFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGP 306 (656)
Q Consensus 231 d~av~Ril~~k~~~G----lf~~~p~~~~~~~~~~~~~~~~~~~~la~~~A~eSiVLLKN~~~~LPL~~~~~~kIaviGp 306 (656)
|+||+|||++|+++| +|+ +|+..+ ....+++++|+++|+++|++|||||||++++|||++ .+||+||||
T Consensus 272 d~av~RIL~~k~~~g~l~~~~~-~p~~~~----~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~--~~~iaviGp 344 (845)
T 3abz_A 272 DDRVRQVLKMIKFVVDNLEKTG-IVENGP----ESTSNNTKETSDLLRKIAADSIVLLKNKNNILPLKK--EDNIIVIGP 344 (845)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHC-CCTTCC----CCCTTCSHHHHHHHHHHHHHHCEEEEECTTCCSCCT--TSCEEEEST
T ss_pred HHHHHHHHHHHHHhCCcccccc-CCccCc----cccccCCHHHHHHHHHHHHhCcEEeccCCcccCCCC--CCEEEEEcC
Confidence 999999999999999 898 554221 122377999999999999999999999999999975 479999999
Q ss_pred CCccccccccccC-CCCCccCCHHHHHHHHh--chhhcccCCcc------------------------------------
Q 006224 307 NSDVTVTMIGNYA-GVACGYTTPLQGISRYA--KTIHQAGCFGV------------------------------------ 347 (656)
Q Consensus 307 ~a~~~~~~~G~~~-g~~~~~~t~le~l~~~~--~~~y~~g~~~~------------------------------------ 347 (656)
+|+....++|++. ..+.+.++++++|+++. .+.|..||...
T Consensus 345 ~A~~~~~~Gggs~~~~~~~~vtpl~gi~~~~~~~v~y~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~~~~~~~~~ 424 (845)
T 3abz_A 345 NAKAKTSSGGGSASMNSYYVVSPYEGIVNKLGKEVDYTVGAYSHKSIGGLAESSLIDAAKPADAENSGLIAKFYSNPVEE 424 (845)
T ss_dssp TTSCCCCSCBSTTCCCBSCCCCHHHHHHHHHTSCCEEECCCCCCSSCCBSGGGEESSTTSCSCTTTBSEEEEEESSCTTT
T ss_pred CcchhhccCCCccCcccCCcCCHHHHHHHhhcCceeeccccccccccccccccccccccccccCCCCceEEEEeccCccc
Confidence 9999876665554 35788999999999874 24455544200
Q ss_pred c-------------------------------------------------------------------------------
Q 006224 348 A------------------------------------------------------------------------------- 348 (656)
Q Consensus 348 ~------------------------------------------------------------------------------- 348 (656)
.
T Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~l~idg~~v~~~~~~~~~~ 504 (845)
T 3abz_A 425 RSDDEEPFHVTKVNRSNVHLFDFKHEKVDPKNPYFFVTLTGQYVPQEDGDYIFSLQVYGSGLFYLNDELIIDQKHNQERG 504 (845)
T ss_dssp SCTTCCCSEEEEECSSEEECTTCCCTTSBTTBCCCEEEEEEEECCSSSEEEEEEEEEESEEEEEETTEEEEEESSSCCBC
T ss_pred CcccccceeeeeccccceeecccccccccccccceeEEEEEEEecCCCccEEEEEeecCceEEEECCEEEeecccccccc
Confidence 0
Q ss_pred ----------------------------c------------------------CC-cccHHHHHHHhhcCCEEEEEEeCC
Q 006224 349 ----------------------------C------------------------NG-NQLIGAAEVAARQADATVLVMGLD 375 (656)
Q Consensus 349 ----------------------------~------------------------~~-~~~~~~a~~~a~~aD~vIv~~G~~ 375 (656)
. .+ ...+++|+++|++||++|||+|.+
T Consensus 505 ~~~~~~~~~~~~~~~~l~~g~~y~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Av~~A~~ADvvVv~vG~~ 584 (845)
T 3abz_A 505 SFCFGAGTKERTKKLTLKKGQVYNVRVEYGSGPTSGLVGEFGAGGFQAGVIKAIDDDEEIRNAAELAAKHDKAVLIIGLN 584 (845)
T ss_dssp STTTTTSBCCEEEEEEECTTCCEEEEEEEECTTTSCCSSCCCCCEEEEEEEECCCHHHHHHHHHHHHHTSSEEEEEEECC
T ss_pred ccccccCcccceeEEEecCCceeeEEEEeccCCcccccccccccceeecccccccchhhHHHHHHHHhcCCEEEEEEecC
Confidence 0 00 123678899999999999999999
Q ss_pred CccccccCCCCCccCChhHHHHHHHHHHhcCCCEEEEEecCcceeccccccCCCccEEEEecCCCchhHHHHHHHHhCCC
Q 006224 376 QSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRA 455 (656)
Q Consensus 376 ~~~~~Eg~Dr~~l~Lp~~Q~~Li~~v~~~~~kpvVvVl~~g~P~~l~~~~~~~~v~AiL~a~~~G~~~g~AlAdVL~G~~ 455 (656)
+..++||.||++|.||+.|.+||++|+++ +||||||+++|+|++|+|+ ++++|||++|||||++|+||||||||++
T Consensus 585 ~~~e~Eg~DR~~l~LP~~Q~~LI~aV~a~-~~~tVVVl~sG~pv~m~w~---~~v~AIL~aw~pGqegG~AiAdVLfG~v 660 (845)
T 3abz_A 585 GEWETEGYDRENMDLPKRTNELVRAVLKA-NPNTVIVNQSGTPVEFPWL---EDANALVQAWYGGNELGNAIADVLYGDV 660 (845)
T ss_dssp TTTSBTTBCCSSSCCCTTHHHHHHHHHHH-CSCEEEEEECSSCCCCTTG---GGCSEEEECCCCCTTHHHHHHHHHTTSS
T ss_pred CccccccCCcccccCCHHHHHHHHHHHHh-CCCEEEEEeCCCcccCcch---hccCeEEEcCCCcHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999986 5799999999999999997 3799999999999999999999999999
Q ss_pred CCCcccCcccCCccccCCCCCccccccc---cCCCCC---CcccccC---CCcccccCcCCCCCCceec--CCccCCCcc
Q 006224 456 NPGGKLPMTWYPQDYVSRLPMTDMRMRA---ARGYPG---RTYRFYK---GPVVFPFGHGMSYTTFAHT--LSKAPNQFS 524 (656)
Q Consensus 456 nPsGkLPvT~~p~~~~~~~p~~~~~~~~---~~~~~~---~~Yr~~~---~~~~ypFG~GLSYTtF~ys--~l~~~~~~~ 524 (656)
|||||||+|| |++. +|+|.++ ++.. ...|.+ .+||||+ .+|+||||||||||||+|| ++++.
T Consensus 661 NPSGkLP~T~-p~~~-~d~P~~~-~~~~~~g~~~y~eg~~vgYR~y~~~~~~plfPFG~GLSYTtF~ys~~~l~v~---- 733 (845)
T 3abz_A 661 VPNGKLSLSW-PFKL-QDNPAFL-NFKTEFGRVIYGEDIFVGYRYYEKLQRKVAFPFGYGLSYTTFELDISDFKVT---- 733 (845)
T ss_dssp CCCCCCSSCB-CSSG-GGSTTTT-SCSCBTTEEECTTTTCCTHHHHHHHTCCCSBCTTCCBCSSCEEEEEEEEEEC----
T ss_pred CCCCCCceee-eCch-hhCCccc-cCCCCCCceeccCCccCCCcchhcCCCceeecccCCCcceeEEEeccccccc----
Confidence 9999999997 8887 7788643 2211 111222 4699997 6899999999999999999 98741
Q ss_pred ccccccccccccccccccccccccccCCCCccEEEEEEEEeCC-CCCcceEEEEEEeCCCCC-CCchhhhhcccccccCC
Q 006224 525 VPIATSLYAFKNTTISSNAIRVAHTNCNDAMSLGLHVDIKNTG-DMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTA 602 (656)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~VtNtG-~~~G~evvQlY~~~~~~~-~~P~k~L~gF~kv~L~p 602 (656)
+. .++|+|+||||| +++|+||||||+++|.++ .+|+||||||+||+|+|
T Consensus 734 ----------------------------~~-~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L~p 784 (845)
T 3abz_A 734 ----------------------------DD-KIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKGFEKVHLEP 784 (845)
T ss_dssp ----------------------------SS-EEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEEEEEEEECT
T ss_pred ----------------------------CC-eEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheeccceeEEECC
Confidence 11 689999999999 999999999999999876 89999999999999999
Q ss_pred CCeEEEEEEec-CCCCceEEeCC-CCEEecCeEEEEEEecCCceeEEEEEe
Q 006224 603 GALQSVRLDIH-VCKHLSVVDKF-GIRRIPMGEHSLHIGDLKHSISLQANL 651 (656)
Q Consensus 603 Ges~~V~~~l~-~~~~ls~~d~~-~~~~~~~G~y~i~vG~ss~~~~~~~~~ 651 (656)
|||++|+|+|+ . ++|++||+. +.|++|+|+|+|+||.||+|++++.++
T Consensus 785 Ges~~V~~~l~~~-~~l~~~d~~~~~~~~e~G~y~v~vG~ss~di~l~~~~ 834 (845)
T 3abz_A 785 GEKKTVNIDLELK-DAISYFNEELGKWHVEAGEYLVSVGTSSDDILSVKEF 834 (845)
T ss_dssp TCEEEEEEEEEHH-HHHCEEETTTTEEEECSEEEEEEEESSTTCEEEEEEE
T ss_pred CCEEEEEEEeCCh-HHeeEEecCCCeEEEcCCEEEEEEECCCCCceeEEEE
Confidence 99999999999 8 899999996 789999999999999999999877654
No 2
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=100.00 E-value=9e-138 Score=1192.20 Aligned_cols=587 Identities=25% Similarity=0.376 Sum_probs=490.4
Q ss_pred cCCCCCChHHHH--------HHHHHHHHHHHHhhhcCCCccceeeCcccc-ccCCCCCCccccccCCCHHHHHHHHHHHH
Q 006224 4 NLPPFYCSICLD--------TRQLYVVSDEARAMYNGGMAGLTYWSPNVN-IFRDPRWGRGQETPGEDPVLTGKYAASYV 74 (656)
Q Consensus 4 ~~~~~P~~~~la--------~~~g~~~a~E~ra~~~~Gi~~~~~laP~vd-i~r~p~~gr~~e~fgeDP~l~~~~a~a~v 74 (656)
++|.||++++|| +++|+++|+|+|++ |+ +++| ||++| |.|||+|||++|+|||||+|+++|+.|+|
T Consensus 71 ~~T~fP~~~~laat~d~~l~~~~g~~~g~E~ra~---Gi-~~~l-aP~vd~v~r~P~~gR~~e~fgeDP~l~~~~a~a~v 145 (713)
T 3zyz_A 71 GSTAFTPGVQAASTWDVNLIRERGQFIGEEVKAS---GI-HVIL-GPVAGPLGKTPQGGRNWEGFGVDPYLTGIAMGQTI 145 (713)
T ss_dssp SCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHT---TC-SEEC-CCBCSSCCCSTTCTTGGGTTCSCHHHHHHHHHHHH
T ss_pred CCCcCcCHHHHHhcCCHHHHHHHHHHHHHHHHhc---CC-CEEE-CCeecccCCCCCCCcccccccCCHHHHHHHHHHHH
Confidence 579999999987 89999999999999 76 6665 99999 88999999999999999999999999999
Q ss_pred HHHccCCCCCCceEEeeccccccCCCCCCCCCccccccccCHHHHHhhccHHHHHHHHcCCcceEeeccccCCCcccccC
Q 006224 75 RGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCAD 154 (656)
Q Consensus 75 ~G~Q~~~~~~~gV~a~~KHF~g~g~~~~~~~~r~~~~~~~~~~~L~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s 154 (656)
+|||+. ||+||+|||||||++. .|...++++++++|+|+||+||+++|++| +.+||||||++||+|||+|
T Consensus 146 ~Glq~~-----gV~a~~KHF~g~g~e~----~r~~~~~~v~~~~l~e~~l~pF~~ai~ag-~~~VM~syn~vng~pa~~s 215 (713)
T 3zyz_A 146 NGIQSV-----GVQATAKHYILNEQEL----NRETISSNPDDRTLHELYTWPFADAVQAN-VASVMCSYNKVNTTWACED 215 (713)
T ss_dssp HHHHHT-----TCEEEEEEETTCCCST----TTTTCEECCCHHHHHHTTTHHHHHHHHTT-CSEEEECSSEETTEEGGGC
T ss_pred HHHhhC-----CeEEEEecCccCCccc----cCccccCcCCHHHHHHhhhHHHHHHHHcC-CCeEEeeccccCCccCcCC
Confidence 999998 8999999999999764 45566788999999999999999999976 8999999999999999999
Q ss_pred HHHHHHhhhhcCCCCcEEEcChhhhhhhhccccccCChHHHHHHHHHcCCCcCCch--------hhHHHHHHHHHCCCCC
Q 006224 155 PDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGP--------FLAIHTEGAVRGGLLR 226 (656)
Q Consensus 155 ~~ll~~lLR~e~gf~G~v~SD~~~~~~~~~~~~~~~~~~e~~~~al~AG~D~~~~~--------~~~~~l~~av~~g~v~ 226 (656)
++||++|||+||||+|+|||||+++. ++++|++||+||+|+. ++.+.|.+||++|+|+
T Consensus 216 ~~ll~~iLR~e~GF~G~VvSD~~a~~--------------~~~~ai~AG~D~~m~~~~~~~~~~~~~~~l~~av~~G~i~ 281 (713)
T 3zyz_A 216 QYTLQTVLKDQLGFPGYVMTDWNAQH--------------TTVQSANSGLDMSMPGTDFNGNNRLWGPALTNAVNSNQVP 281 (713)
T ss_dssp HHHHCCCCCCCSCCCSEEEESTTCCC--------------CSHHHHHHTCCBBSSSSCTTSCCCCSTHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHcCCCEEEEecCccHH--------------HHHHHHHcCCCEeCCCCcccchhHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999998641 3478999999999953 2457899999999999
Q ss_pred HHHHHHHhhhhHHHHHHhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHhhcceecccCCCCCCCcCCCCcEEEEEcc
Q 006224 227 EEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGP 306 (656)
Q Consensus 227 ~~~ld~av~Ril~~k~~~Glf~~~p~~~~~~~~~~~~~~~~~~~~la~~~A~eSiVLLKN~~~~LPL~~~~~~kIaviGp 306 (656)
+++||+||+|||++|+++|+|+ +++.. ... ....+++|+++|+++|++|||||||++++|||++. +||+||||
T Consensus 282 ~~~id~av~RIL~~k~~lg~~~-~~~~~--~~~--~~~~~~~h~~la~~~a~~sivLLKN~~~~LPL~~~--~~IaViG~ 354 (713)
T 3zyz_A 282 TSRVDDMVTRILAAWYLTGQDQ-AGYPS--FNI--SRNVQGNHKTNVRAIARDGIVLLKNDANILPLKKP--ASIAVVGS 354 (713)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTS-TTCCC--CCT--TSCCCTTTHHHHHHHHHHTCEEEEEGGGCCSCCCC--SEEEEESG
T ss_pred HHHHHHHHHHHHHHHHHhCCcc-cCCCC--ccc--ccccCHHHHHHHHHhhhcceEEEccCCCccccCCC--CEEEEECC
Confidence 9999999999999999999997 44321 111 11236799999999999999999999999999764 79999999
Q ss_pred CCcccc-----------------ccccccCC--CCCccCCHHHHHHHHhchhhcccCCccccCCcccHHHHHHHhhcCCE
Q 006224 307 NSDVTV-----------------TMIGNYAG--VACGYTTPLQGISRYAKTIHQAGCFGVACNGNQLIGAAEVAARQADA 367 (656)
Q Consensus 307 ~a~~~~-----------------~~~G~~~g--~~~~~~t~le~l~~~~~~~y~~g~~~~~~~~~~~~~~a~~~a~~aD~ 367 (656)
+|+... ...|.+++ .+.+.++++++|+++... .|+. +.......+++|+++|+++|+
T Consensus 355 ~A~~~~~G~~~~~~~~~~~~~~~~~~g~gs~~~~~~~~~t~~~~i~~~~~~---~g~~-v~~~~~~~~~~a~~~A~~aDv 430 (713)
T 3zyz_A 355 AAIIGNHARNSPSCNDKGCDDGALGMGWGSGAVNYPYFVAPYDAINTRASS---QGTQ-VTLSNTDNTSSGASAARGKDV 430 (713)
T ss_dssp GGSCCTTTTTCTTSGGGCCCCSSCCCCBSTTCCCCSCCCCHHHHHHHHHHT---TTCE-EEEECSCCHHHHHHHHTTCSE
T ss_pred CccccccccccccccccccccCceecccCCCCcCcCCCCCHHHHHHHHhcc---CCeE-EEEeCCccHHHHHHHhhcCCE
Confidence 997421 11232333 466789999999987421 1211 111123468899999999999
Q ss_pred EEEEEeCCCccccccC--------CCCCccCChhHHHHHHHHHHhcCCCEEEEEecCcceec-cccccCCCccEEEEecC
Q 006224 368 TVLVMGLDQSIEAEFI--------DRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDV-SFAKNDPRIGAILWVGY 438 (656)
Q Consensus 368 vIv~~G~~~~~~~Eg~--------Dr~~l~Lp~~Q~~Li~~v~~~~~kpvVvVl~~g~P~~l-~~~~~~~~v~AiL~a~~ 438 (656)
+|||+|.. ++|+. ||.+|.||..|.+||++|+++ ++|+|||+++|+|++| +|+ +.++++|||++||
T Consensus 431 ~Iv~vg~~---~gEg~~~~~g~~gDR~~l~Lp~~Q~~Li~~v~~~-~~~~VVVl~sG~p~~~~~w~-~~~~v~Ail~aw~ 505 (713)
T 3zyz_A 431 AIVFITAD---SGEGYITVEGNAGDRNNLDPWHNGNALVQAVAGA-NSNVIVVVHSVGAIILEQIL-ALPQVKAVVWAGL 505 (713)
T ss_dssp EEEEEEEC---CBCTTCCBTTBCSSCSCSSCSTTHHHHHHHHHHH-CSCEEEEEEESSCCCCHHHH-TCTTEEEEEECCC
T ss_pred EEEEeccc---CCCCccccccCCCCcccccCChhHHHHHHHHHHh-CCCeEEEEecCCcccchhhh-hccccCEEEEcCC
Confidence 99999854 46666 999999999999999999975 6799999999999999 676 3468999999999
Q ss_pred CCchhHHHHHHHHhCCCCCCcccCcccCCccccCCCCCccccccccCCCCC---CcccccCC---CcccccCcCCCCCCc
Q 006224 439 PGQAGGAAIADVLFGRANPGGKLPMTWYPQDYVSRLPMTDMRMRAARGYPG---RTYRFYKG---PVVFPFGHGMSYTTF 512 (656)
Q Consensus 439 ~G~~~g~AlAdVL~G~~nPsGkLPvT~~p~~~~~~~p~~~~~~~~~~~~~~---~~Yr~~~~---~~~ypFG~GLSYTtF 512 (656)
|||++|+||||||||++|||||||+|| |++. +|+|... +..+...|.+ ++||||+. +|+||||||||||||
T Consensus 506 pGqegG~AiAdvL~G~~nPSGkLP~T~-p~~~-~d~p~~~-~~~~~~~y~eg~~vgYRy~d~~~~~plypFG~GLSYTtF 582 (713)
T 3zyz_A 506 PSQESGNALVDVLWGDVSPSGKLVYTI-AKSP-NDYNTRI-VSGGSDSFSEGLFIDYKHFDDANITPRYEFGYGLSYTKF 582 (713)
T ss_dssp CGGGHHHHHHHHHTTSSCCCCCCSSCB-CSCG-GGSSCCC-CCSSEECCTTTTCCHHHHHHHTTCCCSBCTTCCBCSSCE
T ss_pred CCchhhheehhhhcCCcCCCccCccee-cCCh-hhCCCcc-ccCCccccCCCCccCceeccCCCCceeecCCCCCCcccE
Confidence 999999999999999999999999997 8876 7787432 1111223433 58999984 799999999999999
Q ss_pred eecCCccCCCccccccccccccccccccccccccc-cccCCCCccEEEEEEEEeCCCCCcceEEEEEEeCCCCC-CCchh
Q 006224 513 AHTLSKAPNQFSVPIATSLYAFKNTTISSNAIRVA-HTNCNDAMSLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNK 590 (656)
Q Consensus 513 ~ys~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~VtNtG~~~G~evvQlY~~~~~~~-~~P~k 590 (656)
+||++++++.... .. ....+..+ ...+.+. .++|+|+|||||+++|+||||||+++|.++ .+|+|
T Consensus 583 ~ys~l~~~~~~~~---~~---------~~~~~~~gg~~~~~~~-~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k 649 (713)
T 3zyz_A 583 NYSRLSVLSTAKS---GP---------ATGAVVPGGPSDLFQN-VATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPK 649 (713)
T ss_dssp EEEEEEEEECCCC---EE---------CCSCEETTEETTTTSE-EEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSC
T ss_pred EEeeeEecccccc---Cc---------ccccccccccccccCC-eEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhH
Confidence 9999987431000 00 00000000 0000122 699999999999999999999999999886 89999
Q ss_pred hhhcccccccCCCCeEEEEEEecCCCCceEEeCC-CCEEecCeEEEEEEecCCceeEEEEEec
Q 006224 591 QLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKF-GIRRIPMGEHSLHIGDLKHSISLQANLE 652 (656)
Q Consensus 591 ~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~~-~~~~~~~G~y~i~vG~ss~~~~~~~~~~ 652 (656)
|||||+||+|+||||++|+|+|++ ++|++||+. ++|++|+|+|+|+||.||+|++++.+++
T Consensus 650 ~L~gF~kv~L~pGes~~V~~~l~~-~~ls~~d~~~~~w~ve~G~y~v~vG~sS~d~~l~~~~~ 711 (713)
T 3zyz_A 650 QLRGFAKLNLTPGQSGTATFNIRR-RDLSYWDTASQKWVVPSGSFGISVGASSRDIRLTSTLS 711 (713)
T ss_dssp EEEEEEEEEECTTCEEEEEEEEEG-GGGCEEETTTTEEEECCEEEEEEEESSSSCEEEEEEEE
T ss_pred HhhhcccceeCCCCeEEEEEEEcH-HHeeeeecCCCeEEEcCceEEEEEECCCCCcceeEEEE
Confidence 999999999999999999999998 999999986 6899999999999999999999987764
No 3
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=100.00 E-value=2.9e-136 Score=1186.16 Aligned_cols=567 Identities=29% Similarity=0.431 Sum_probs=492.9
Q ss_pred cCCCCCChHHHH--------HHHHHHHHHHHHhhhcCCCccceeeCccccccCCCCCCccccccCCCHHHHHHHHHHHHH
Q 006224 4 NLPPFYCSICLD--------TRQLYVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVR 75 (656)
Q Consensus 4 ~~~~~P~~~~la--------~~~g~~~a~E~ra~~~~Gi~~~~~laP~vdi~r~p~~gr~~e~fgeDP~l~~~~a~a~v~ 75 (656)
+.|.||++++|| +++|+++|+|+|++ |+ +++| ||++||.|||+|||++|||||||+|+++|+.|+|+
T Consensus 77 ~~t~fP~~~~laat~d~~l~~~~g~~~a~E~~a~---Gi-~~~~-aP~vdi~r~p~~gR~~e~fgeDP~l~~~~a~a~v~ 151 (721)
T 2x41_A 77 YTTAFPVEIMLASTWNRELLEEVGKAMGEEVREY---GV-DVLL-APAMNIHRNPLCGRNFEYYSEDPVLSGEMASSFVK 151 (721)
T ss_dssp CCCCCCCHHHHHHTCCHHHHHHHHHHHHHHHHHT---TC-SEEC-CCBCCCCCSTTCTTGGGSCCSSHHHHHHHHHHHHH
T ss_pred CcccCCCHHHHhhcCCHHHHHHHHHHHHHHHHHh---CC-CEEe-eceECCCCCCCCCcccccCCCCHHHHHHHHHHHHH
Confidence 479999999987 89999999999999 77 6665 99999999999999999999999999999999999
Q ss_pred HHccCCCCCCceEEeeccccccCCCCCCCCCccccccccCHHHHHhhccHHHHHHHHcCCcceEeeccccCCCcccccCH
Q 006224 76 GLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADP 155 (656)
Q Consensus 76 G~Q~~~~~~~gV~a~~KHF~g~g~~~~~~~~r~~~~~~~~~~~L~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~ 155 (656)
|||+. ||+||+|||||||++ ..|...++.+++++|+|+||+||+++|+++++.+||||||.+||+|||+|+
T Consensus 152 G~q~~-----gV~a~~KHF~g~g~e----~~r~~~ds~~~~~~l~e~~l~pF~~ai~~a~~~~vM~sy~~i~g~pa~~s~ 222 (721)
T 2x41_A 152 GVQSQ-----GVGACIKHFVANNQE----TNRMVVDTIVSERALREIYLRGFEIAVKKSKPWSVMSAYNKLNGKYCSQNE 222 (721)
T ss_dssp HHHTT-----TCBCEEEEETTCCCC----TTTTTCEEECCHHHHHHTHHHHHHHHHHHHCCSEEEECSSEETTEEGGGCH
T ss_pred HhhhC-----CeEEEecccccCCCC----CCCCcccCCCCHHHHHhhhHHHHHHHHHhcCCCEEEecCCCCCCccccCCH
Confidence 99998 899999999999965 367777889999999999999999999955599999999999999999999
Q ss_pred HHHHHhhhhcCCCCcEEEcChhhhhhhhccccccCChHHHHHHHHHcCCCcCCch--hh--H------HHHHHHHHCCCC
Q 006224 156 DILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGP--FL--A------IHTEGAVRGGLL 225 (656)
Q Consensus 156 ~ll~~lLR~e~gf~G~v~SD~~~~~~~~~~~~~~~~~~e~~~~al~AG~D~~~~~--~~--~------~~l~~av~~g~v 225 (656)
+||++|||+||||+|+|||||+++. ++++|++||+||+|+. .+ . +.|.+||++|+|
T Consensus 223 ~ll~~lLR~e~GF~G~VvSD~~~~~--------------~~~~al~AG~D~~m~~~~~~~~~~~~~~~~~l~~av~~G~i 288 (721)
T 2x41_A 223 WLLKKVLREEWGFEGFVMSDWYAGD--------------NPVEQLKAGNDLIMPGKAYQVNTERRDEIEEIMEALKEGKL 288 (721)
T ss_dssp HHHTCCCCCCTCCCSEEEECTTCSS--------------CHHHHHHHTCCBBCSCCGGGTCTTCCCHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHhcCCCEEEEccCchHH--------------HHHHHHHcCCCcccCCCcccccchhHHHHHHHHHHHHcCCc
Confidence 9999999999999999999998752 3688999999999853 22 2 789999999999
Q ss_pred CHHHHHHHhhhhHHHHHHhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHhhcceecccCCCCCCCcCCCCcEEEEEc
Q 006224 226 REEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIG 305 (656)
Q Consensus 226 ~~~~ld~av~Ril~~k~~~Glf~~~p~~~~~~~~~~~~~~~~~~~~la~~~A~eSiVLLKN~~~~LPL~~~~~~kIaviG 305 (656)
++++||+||+|||++|+++|+|+ +|+. ...+++++|+++|+++|+||||||||++ +|||++. +||+|||
T Consensus 289 ~~~~id~av~Ril~~k~~~gl~~-~~~~-------~~~~~~~~h~~la~~~A~esiVLLKN~~-~LPL~~~--~kIaviG 357 (721)
T 2x41_A 289 SEEVLDECVRNILKVLVNAPSFK-NYRY-------SNKPDLEKHAKVAYEAGAEGVVLLRNEE-ALPLSEN--SKIALFG 357 (721)
T ss_dssp CHHHHHHHHHHHHHHHTTSGGGG-TCCC-------CSCCCHHHHHHHHHHHHHHHCEEEEESS-CCSCCTT--CCEEEES
T ss_pred cHHHHHHHHHHHHHHHHHhCCCC-CCCc-------ccccCCHHHHHHHHHHHHhchhhhcCCC-cCCCCCC--CEEEEEe
Confidence 99999999999999999999998 4431 2346789999999999999999999998 9999764 7999999
Q ss_pred cCCcccccccc-ccCCCCCccCCHHHHHHHH-hc------hhhc-------------cc---CCcc--ccCCcccH--HH
Q 006224 306 PNSDVTVTMIG-NYAGVACGYTTPLQGISRY-AK------TIHQ-------------AG---CFGV--ACNGNQLI--GA 357 (656)
Q Consensus 306 p~a~~~~~~~G-~~~g~~~~~~t~le~l~~~-~~------~~y~-------------~g---~~~~--~~~~~~~~--~~ 357 (656)
|+++.....++ +....+.+.++++++|+++ .. +.|. .| +... ...+...+ ++
T Consensus 358 ~~A~~~~~~g~gs~~~~~~~~vt~~~gl~~~G~~~~~~~~v~y~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 437 (721)
T 2x41_A 358 TGQIETIKGGTGSGDTHPRYAISILEGIKERGLNFDEELAKTYEDYIKKMRETEEYKPRRDSWGTIIKPKLPENFLSEKE 437 (721)
T ss_dssp GGGTSCCCSCBSTTCCCCSCCCCHHHHHHHTTCCBCHHHHHHHHHHHHHHHHSTTTSCBC-----CBCCCCCSCCSCHHH
T ss_pred cCCcCccccCCCCCCcCcCCCCCHHHHHHHhccCCCCceEEEEeecccccccccccCCCccceeccccCCCchhhhcHHH
Confidence 99988765332 2334677889999999987 32 4566 55 3210 11234456 88
Q ss_pred HHHHhhcCCEEEEEEeCCCccccccCCCC----CccCChhHHHHHHHHH----HhcCCCEEEEEecCcceec-cccccCC
Q 006224 358 AEVAARQADATVLVMGLDQSIEAEFIDRA----GLLLPGRQQELVSRVA----KASRGPVVLVLMCGGPVDV-SFAKNDP 428 (656)
Q Consensus 358 a~~~a~~aD~vIv~~G~~~~~~~Eg~Dr~----~l~Lp~~Q~~Li~~v~----~~~~kpvVvVl~~g~P~~l-~~~~~~~ 428 (656)
++++|+++|++||++|.+ ++|+.||. +|.||..|.+||++|+ + .++|+|||+++|+|++| +|. +
T Consensus 438 a~~~a~~aDvvIv~vg~~---~gEg~Dr~~~~~~l~Lp~~q~~LI~~v~~~~~~-~~~~vVVVl~~g~P~~l~~~~---~ 510 (721)
T 2x41_A 438 IHKLAKKNDVAVIVISRI---SGEGYDRKPVKGDFYLSDDETDLIKTVSREFHE-QGKKVIVLLNIGSPVEVVSWR---D 510 (721)
T ss_dssp HHHHHHHCSEEEEEEECC---CBTTCCCCSSBTTTBCCHHHHHHHHHHHHHHHH-TTCCEEEEEECSSCCCCTTTG---G
T ss_pred HHHHHhcCCEEEEEEecc---ccccccccCCCCCccCCHHHHHHHHHHHHHHHH-hCCCEEEEEecCCceEccchh---h
Confidence 999999999999999976 78999999 9999999999999998 6 46899999999999999 665 5
Q ss_pred CccEEEEecCCCchhHHHHHHHHhCCCCCCcccCcccCCccccCCCCCcccccccc-----CCCCC---CcccccC---C
Q 006224 429 RIGAILWVGYPGQAGGAAIADVLFGRANPGGKLPMTWYPQDYVSRLPMTDMRMRAA-----RGYPG---RTYRFYK---G 497 (656)
Q Consensus 429 ~v~AiL~a~~~G~~~g~AlAdVL~G~~nPsGkLPvT~~p~~~~~~~p~~~~~~~~~-----~~~~~---~~Yr~~~---~ 497 (656)
+++|||++|+||+++|+|+||||||++|||||||+|| |++. +++|..++...+. ..|.+ .+||||| .
T Consensus 511 ~v~AiL~a~~pG~egg~AlAdVL~G~vnPSGkLPvT~-p~~~-~~~p~~~~~~~~~~~~~~~~y~eg~~vgYry~d~~~~ 588 (721)
T 2x41_A 511 LVDGILLVWQAGQETGRIVADVLTGRINPSGKLPTTF-PRDY-SDVPSWTFPGEPKDNPQKVVYEEDIYVGYRYYDTFGV 588 (721)
T ss_dssp GCSEEEECCCCGGGHHHHHHHHHHTSSCCCCCCSSCE-ESSG-GGCSCTTTTCBSTTSCSEEECTTTTCCTHHHHHHHTC
T ss_pred cCCEEEEcCCCchhHHHHHHHHHcCCCCCCCCCceee-cCcc-ccCccccCCCCCccccccccccCCcccccceeecCCC
Confidence 7999999999999999999999999999999999997 9887 7788722221111 12332 3799997 4
Q ss_pred CcccccCcCCCCCCceecCCccCCCccccccccccccccccccccccccccccCCCCccEEEEEEEEeCCCCCcceEEEE
Q 006224 498 PVVFPFGHGMSYTTFAHTLSKAPNQFSVPIATSLYAFKNTTISSNAIRVAHTNCNDAMSLGLHVDIKNTGDMAGTHTLLV 577 (656)
Q Consensus 498 ~~~ypFG~GLSYTtF~ys~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~VtNtG~~~G~evvQl 577 (656)
+|+||||||||||||+||++++.. . +. +++|+|+|||||+++|+|||||
T Consensus 589 ~plypFG~GLSYTtF~ys~~~~~~-------------------------~-----~~-~~~v~v~VtNtG~~~G~eVvQl 637 (721)
T 2x41_A 589 EPAYEFGYGLSYTTFEYSDLNVSF-------------------------D-----GE-TLRVQYRIENTGGRAGKEVSQV 637 (721)
T ss_dssp CEEECTTCCBCSSCEEEEEEEEEE-------------------------C-----SS-EEEEEEEEEECSSSCBCCEEEE
T ss_pred ceeeccCCCCCcceeEeeceEeec-------------------------C-----CC-eEEEEEEEEECCCCCCcEEeeE
Confidence 799999999999999999988521 1 12 6999999999999999999999
Q ss_pred EEeCCCCC-CCchhhhhccccc-ccCCCCeEEEEEEecCCCCceEEeCCCCEEecCeEEEEEEecCCceeEEEEEe
Q 006224 578 FAKPPAGN-WSPNKQLIGFKKV-HVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIGDLKHSISLQANL 651 (656)
Q Consensus 578 Y~~~~~~~-~~P~k~L~gF~kv-~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G~y~i~vG~ss~~~~~~~~~ 651 (656)
|+++|.++ .+|.||||||+|| +|+||||++|+|+|++ ++|++|| .++|++|+|+|+|+||.||+|++++..+
T Consensus 638 Yv~~~~~~~~~P~k~L~gF~kv~~L~pGes~~V~~~l~~-~~l~~~d-~~~~~~e~G~y~v~vG~ss~d~~~~~~~ 711 (721)
T 2x41_A 638 YIKAPKGKIDKPFQELKAFHKTRLLNPGESEEVVLEIPV-RDLASFN-GEEWVVEAGEYEVRVGASSRNIKLKGTF 711 (721)
T ss_dssp EEECCCSSSCCCSCEEEEEEECCCBCTTCEEEEEEEEEG-GGGCEEC-SSCEEECCEEEEEEEEEETTEEEEEEEE
T ss_pred EEccCCCCCCCchHHhhcccccccCCCCCeEEEEEEECH-HHhcEEc-CCeEEEeCceEEEEEECCCCCcceEEEE
Confidence 99999876 8999999999999 9999999999999998 8999999 9999999999999999999999776543
No 4
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A
Probab=100.00 E-value=9.2e-106 Score=926.42 Aligned_cols=459 Identities=26% Similarity=0.388 Sum_probs=390.5
Q ss_pred ccCCCCCChHHHH--------HHHHHHHHHHHHhhhcCCCccceeeCccccccCCCCCCccccccCCCHHHHHHHHHHHH
Q 006224 3 INLPPFYCSICLD--------TRQLYVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYV 74 (656)
Q Consensus 3 ~~~~~~P~~~~la--------~~~g~~~a~E~ra~~~~Gi~~~~~laP~vdi~r~p~~gr~~e~fgeDP~l~~~~a~a~v 74 (656)
.+.|.||++++|| +++|+++|+|+|++ |+ +++| +|++||.|||+|||++|+|||||+|+++|+.|||
T Consensus 119 ~~aT~FP~~i~laAt~d~~L~~~~g~~ia~E~ra~---Gi-n~~~-aPvvDv~rdPr~GR~~EsfGEDP~lv~~~a~A~V 193 (822)
T 3rrx_A 119 YGATLFPHNIGLGAARDTDLIKRIGQATAKEVAAT---GI-EWSF-APTVAVVRDDRWGRTYESYSEDPDLVKRYAGEMV 193 (822)
T ss_dssp TTCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHTT---TC-CEEE-EEECCCCSCTTSTTGGGSSCSCHHHHHHHHHHHH
T ss_pred CCCCCCcCHHHHhhcCCHHHHHHHHHHHHHHHHhc---CC-cEee-ccccccccCCCcCccccCCCCCHHHHHHHHHHHH
Confidence 4679999999987 99999999999999 77 6665 9999999999999999999999999999999999
Q ss_pred HHHccCC----CCCCceEEeeccccccCCCCCCCCCccccccccCHHHHHhhccHHHHHHHHcCCcceEeeccccCCCcc
Q 006224 75 RGLQGNT----GSRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKP 150 (656)
Q Consensus 75 ~G~Q~~~----~~~~gV~a~~KHF~g~g~~~~~~~~r~~~~~~~~~~~L~e~~l~pF~~ai~~g~~~~vM~sy~~vng~p 150 (656)
+|||+.+ .+..||+||+|||||||... .+|+..++.+++++|+|+||+||+++|++| +.+||||||.+||+|
T Consensus 194 ~GlQ~~~~~~~~~~~gV~a~~KHFpG~G~~~---~~r~~~~~~vs~~~L~e~~L~PF~~aI~ag-~~sVM~syn~vng~p 269 (822)
T 3rrx_A 194 TGIQGDVGADFLKGSNRIATAKHFVGDGGTE---RGVDRGNTLIDEKGLRDIHSAGYFSAINQG-VQSVMASFNSWNGKR 269 (822)
T ss_dssp HHHHCCSSTTTTCTTCCEEEEEEESCGGGBG---GGCTTCEECCCHHHHHHTTSHHHHHHHHTT-CSEEEECSSEETTEE
T ss_pred HHHhcccccccccCCCeEEEeeeccCCCccc---cCccCccCcCCHHHHHHHhhHHHHHHHHcC-CCEEEeccccCCCcc
Confidence 9999851 12348999999999998532 345556778999999999999999999977 899999999999999
Q ss_pred cccCHHHHHHhhhhcCCCCcEEEcChhhhhhhhccccccCChHHHHHHHHHcCCCcCCchh----hHHHHHHHHHCCCCC
Q 006224 151 TCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGPF----LAIHTEGAVRGGLLR 226 (656)
Q Consensus 151 a~~s~~ll~~lLR~e~gf~G~v~SD~~~~~~~~~~~~~~~~~~e~~~~al~AG~D~~~~~~----~~~~l~~av~~g~v~ 226 (656)
+|.|++||++|||+||||+|+|||||++|+.+.. ...+++++|++||+||+|.+. +.+.|.++|++|+|+
T Consensus 270 a~~s~~lLtdlLR~e~GF~G~VvSD~~~~~~i~~------~~~ea~~~Al~AG~Dm~m~~~~~~~~~~~l~~aV~~G~i~ 343 (822)
T 3rrx_A 270 VHGDKHLLTDVLKNQLGFDGFVVSDWNAHKFVEG------CDLEQCAQAINAGVDVIMVPEHFEAFYHNTVKQVKAGVIA 343 (822)
T ss_dssp GGGCHHHHTCCCCCCSCCCSEEECCTTGGGGSTT------CBTTBCHHHHHHTCCBEECTTTHHHHHHHHHHHHHTTSSC
T ss_pred ccCCHHHHHHHHHHhcCCCeEEecccchhhhhcC------ChHHHHHHHHHcCCCEECCCccHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999987643 234677899999999999642 457899999999999
Q ss_pred HHHHHHHhhhhHHHHHHhcCCCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHhhcceecccCCCCCCCcCCCCcEEEEE
Q 006224 227 EEDVNLALAYTITVQMRLGMFDGEPSAQ--PFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVI 304 (656)
Q Consensus 227 ~~~ld~av~Ril~~k~~~Glf~~~p~~~--~~~~~~~~~~~~~~~~~la~~~A~eSiVLLKN~~~~LPL~~~~~~kIavi 304 (656)
++|||+||+|||++|+++|||+ +|+.. ++.. ....+++++|+++|+++|++|||||||++++|||++. +||+||
T Consensus 344 e~rID~av~RIL~~K~~lGLfd-~p~~~~~~~~~-~~~~v~~~eh~~lAre~A~eSiVLLKN~~~~LPL~~~--~~IaVi 419 (822)
T 3rrx_A 344 ESRINDAVRRFLRAKIRWGVFT-KSKPSARPESQ-HPQWLGAAEHRTLAREAVRKSLVLLKNNESILPIKAS--SRILVA 419 (822)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTT-SCCGGGSGGGS-CGGGTTCHHHHHHHHHHHHHHCEEEEEGGGCCSBCTT--SEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCC-CCCcccccccc-cccccCCHHHHHHHHHHHHhceEEEecCCCccCCCCC--CeEEEE
Confidence 9999999999999999999999 55421 1111 1235789999999999999999999999999999764 799999
Q ss_pred ccCCccccccccccC----C------CCCccCCHHHHHHHHhc-----hhhcccCCccccCCcccHHHHHHHhhcCCEEE
Q 006224 305 GPNSDVTVTMIGNYA----G------VACGYTTPLQGISRYAK-----TIHQAGCFGVACNGNQLIGAAEVAARQADATV 369 (656)
Q Consensus 305 Gp~a~~~~~~~G~~~----g------~~~~~~t~le~l~~~~~-----~~y~~g~~~~~~~~~~~~~~a~~~a~~aD~vI 369 (656)
||+|++...+.|+|+ | ..++.+|++++|+++.. +.|.. . .+.++++|++|
T Consensus 420 Gp~A~~~~~~~Ggws~~~~G~gs~~~~~~~~~t~l~gi~~~~~~~~~~v~~~~---------~------~~~a~~aDv~I 484 (822)
T 3rrx_A 420 GKGANAINMQAGGWSVSWQGTDNTNSDFPNATSIFSGLQSQVTKAGGKITLSE---------S------GEYTSKPDVAI 484 (822)
T ss_dssp STTTTCHHHHHCSSSSSSSCTTCCGGGSTTCBCHHHHHHHHHHHTTCEEEECT---------T------CCCSSCCSEEE
T ss_pred cCCccchhhccCCcceeccccCCCcCCCCCCCCHHHHHHHHHHhcCCeEEEcc---------c------ccccccCCeEE
Confidence 999998766677663 2 13467899999998743 11211 0 02368999999
Q ss_pred EEEeCCCccccccCCCCCccCC---hhHHHHHHHHHHhcCCCEEEEEecCcceeccccccCCCccEEEEecCCCchhHHH
Q 006224 370 LVMGLDQSIEAEFIDRAGLLLP---GRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAA 446 (656)
Q Consensus 370 v~~G~~~~~~~Eg~Dr~~l~Lp---~~Q~~Li~~v~~~~~kpvVvVl~~g~P~~l~~~~~~~~v~AiL~a~~~G~~~g~A 446 (656)
||+|+++..|++| ||.+|.|| +.|.+||++|++ .+||||||+++|+|+.|.|+. ++++|||++||||++++ |
T Consensus 485 v~~Ge~~~~e~~g-Dr~~L~lp~g~~~q~~Li~av~a-~g~pvVvVl~sGrP~~l~~~~--~~~~Ail~aw~pG~eGg-A 559 (822)
T 3rrx_A 485 VVIGEEPYAEWFG-DIELLEFQHETKHALALLKQLKA-DNIPVVTVFLSGRPLWVNKEL--NASDAFVAAWLPGSEGE-G 559 (822)
T ss_dssp EEEECCCCCGGGG-CCSCCBTTTTTCHHHHHHHHHHH-TTCCEEEEEECSSCCBCHHHH--HTCSEEEEEECCCSBTH-H
T ss_pred EEecCCcccccCC-CcccccCCCCChHHHHHHHHHHH-hCCCEEEEEeCCcceeccchh--hhCCeEEEcCCCCchhH-H
Confidence 9999988777776 99999999 689999999986 578999999999999996553 47999999999999987 9
Q ss_pred HHHHHhCCC------CCCcccCcccCCccccCCCCCccccccccCCCCCCcccccCCCcccccCcCCCCCCceecC
Q 006224 447 IADVLFGRA------NPGGKLPMTWYPQDYVSRLPMTDMRMRAARGYPGRTYRFYKGPVVFPFGHGMSYTTFAHTL 516 (656)
Q Consensus 447 lAdVL~G~~------nPsGkLPvT~~p~~~~~~~p~~~~~~~~~~~~~~~~Yr~~~~~~~ypFG~GLSYTtF~ys~ 516 (656)
|||||||++ |||||||+|| |++. +|+|..+ ++.+| +|+||||||||||||+|..
T Consensus 560 iAdVLfG~v~g~~~~nPSGkLP~T~-P~~~-~q~P~~~------------~~~~~--~PlypFG~GLSYt~f~~~~ 619 (822)
T 3rrx_A 560 VADVLLTNKQGKTQFDFTGKLSFSW-PKYD-DQFTLNL------------NDADY--DPLFAYGYGLTYQDNINVP 619 (822)
T ss_dssp HHHHHBBCTTSCBSCCCCCCCSSCB-CSST-TCTTCCT------------TCSSC--CCSBCTTCCBCTTCCCCCC
T ss_pred HHHHHhcccccccccCCCCCCceec-cCCc-ccCCccc------------CCCCC--ccccCCCCCcCCCCCcccc
Confidence 999999997 9999999997 9987 8899621 01122 7999999999999999864
No 5
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A*
Probab=100.00 E-value=5.9e-104 Score=899.11 Aligned_cols=458 Identities=25% Similarity=0.387 Sum_probs=393.5
Q ss_pred cCCCCCChHHHH--------HHHHHHHHHHHHhhhcCCCccceeeCccccccCCCCCCccccccCCCHHHHHHHHHHHHH
Q 006224 4 NLPPFYCSICLD--------TRQLYVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVR 75 (656)
Q Consensus 4 ~~~~~P~~~~la--------~~~g~~~a~E~ra~~~~Gi~~~~~laP~vdi~r~p~~gr~~e~fgeDP~l~~~~a~a~v~ 75 (656)
+.|.||++++|| +++|+++|+|+|++ |+ +++| ||++||.|||+|||++|||||||+|+++|+. ||+
T Consensus 105 ~~t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~---Gi-~~~~-aP~vdv~r~p~~GR~~esfgeDP~lv~~~a~-~v~ 178 (602)
T 1x38_A 105 GATIFPHNVGLGATRDPYLVKRIGEATALEVRAT---GI-QYAF-APCIAVCRDPRWGRCYESYSEDRRIVQSMTE-LIP 178 (602)
T ss_dssp TCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHT---TC-CEEC-CCBCCCCSCTTSTTGGGSSCSSHHHHHHGGG-HHH
T ss_pred CCCCCCCHHHHHhccCHHHHHHHHHHHHHHHHHc---CC-CEEe-eceeccccCCCcCccccCcCCCHHHHHHHHH-HHH
Confidence 579999999987 89999999999999 77 6665 9999999999999999999999999999999 999
Q ss_pred HHccCCCC-----------CCceEEeeccccccCCCCCCCCCccccccccCHHHHHhhccHHHHHHHHcCCcceEeeccc
Q 006224 76 GLQGNTGS-----------RLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYN 144 (656)
Q Consensus 76 G~Q~~~~~-----------~~gV~a~~KHF~g~g~~~~~~~~r~~~~~~~~~~~L~e~~l~pF~~ai~~g~~~~vM~sy~ 144 (656)
|+|+.+.. ..||+||+|||||||.+. .+++..++++++++|+|+||+||+++|++| +.+||||||
T Consensus 179 GlQ~~~~~~~~~~~~~~~~~~gV~a~~KHFpg~g~~~---~~~~~~~~~~~~~~l~e~~l~pF~~ai~ag-~~~vM~sy~ 254 (602)
T 1x38_A 179 GLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTV---DGINENNTIINREGLMNIHMPAYKNAMDKG-VSTVMISYS 254 (602)
T ss_dssp HHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCG---GGCTTCEECCCHHHHHHHTSHHHHHHHHTT-CCEEEECSS
T ss_pred HhcCCCccccccccccccccCCeEEEeccccCCCccc---cCcccccCcCCHHHHHHHHHHHHHHHHHcC-CCEEEeccc
Confidence 99993210 138999999999999753 234445678999999999999999999986 899999999
Q ss_pred cCCCcccccCHHHHHHhhhhcCCCCcEEEcChhhhhhhhccccccCChHHHHHHHHHcCCCcCCch----hhHHHHHHHH
Q 006224 145 QVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGP----FLAIHTEGAV 220 (656)
Q Consensus 145 ~vng~pa~~s~~ll~~lLR~e~gf~G~v~SD~~~~~~~~~~~~~~~~~~e~~~~al~AG~D~~~~~----~~~~~l~~av 220 (656)
.+||+|||+|++||++|||+||||+|+|||||++|.++...|+ .+..+++++|++||+||+|.+ .+.+.|.+||
T Consensus 255 ~v~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~~~~~~~~--~~~~~a~~~al~AG~D~~m~~~~~~~~~~~l~~av 332 (602)
T 1x38_A 255 SWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAG--SDYSYSVKASILAGLDMIMVPNKYQQFISILTGHV 332 (602)
T ss_dssp EETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSSSTT--TTHHHHHHHHHHHTCCBEECCSCHHHHHHHHHHHH
T ss_pred ccCCccccCCHHHHHHHhhcccCCCeEEEccchHHHHHHhhcC--CCHHHHHHHHHHcCCCcccCCcchhhHHHHHHHHH
Confidence 9999999999999999999999999999999999998876554 467899999999999999853 3457899999
Q ss_pred HCCCCCHHHHHHHhhhhHHHHHHhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHhhcceecccCC--C---CCCCcC
Q 006224 221 RGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSA--R---TLPLST 295 (656)
Q Consensus 221 ~~g~v~~~~ld~av~Ril~~k~~~Glf~~~p~~~~~~~~~~~~~~~~~~~~la~~~A~eSiVLLKN~~--~---~LPL~~ 295 (656)
++|+|++++||+||+|||++|+++|+|+ +|+... . ....+++++|+++|+++|++|||||||++ + +|||++
T Consensus 333 ~~G~i~~~~id~av~RiL~~k~~~glf~-~p~~~~--~-~~~~~~~~~~~~la~~~a~~sivLLKN~~~~~~~~~LPL~~ 408 (602)
T 1x38_A 333 NGGVIPMSRIDDAVTRILRVKFTMGLFE-NPYADP--A-MAEQLGKQEHRDLAREAARKSLVLLKNGKTSTDAPLLPLPK 408 (602)
T ss_dssp HTTSSCHHHHHHHHHHHHHHHHHTTTTT-CCSCCG--G-GGGGTTCHHHHHHHHHHHHHHCEEEEECSSTTSCCCCSCCS
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhCCCC-CCCCCc--c-hhhccCCHHHHHHHHHHHHhceEEeccCCCCCcccccccCC
Confidence 9999999999999999999999999999 665321 1 11357899999999999999999999997 5 999976
Q ss_pred CCCcEEEEEccCCccccccccccC-------CCCCccCCHHHHHHHHh----chhhcccCCccccCCcccHHHHHHHhhc
Q 006224 296 LRHHTVAVIGPNSDVTVTMIGNYA-------GVACGYTTPLQGISRYA----KTIHQAGCFGVACNGNQLIGAAEVAARQ 364 (656)
Q Consensus 296 ~~~~kIaviGp~a~~~~~~~G~~~-------g~~~~~~t~le~l~~~~----~~~y~~g~~~~~~~~~~~~~~a~~~a~~ 364 (656)
+ .+||+||||+|+....++|+|+ +.+...++++++|+++. .+.|..++. . .+. .|++
T Consensus 409 ~-~~~iaviG~~A~~~~~~~gg~~~~~~g~~~~~~~~~t~~~~l~~~~~~~~~v~~~~~~~---------~-~~~-~a~~ 476 (602)
T 1x38_A 409 K-APKILVAGSHADNLGYQCGGWTIEWQGDTGRTTVGTTILEAVKAAVDPSTVVVFAENPD---------A-EFV-KSGG 476 (602)
T ss_dssp C-CSEEEEESTTTTCHHHHHCSSSSSTTCCSSCCSSCBCHHHHHHHHSCTTCEEEEESSCC---------H-HHH-HHTT
T ss_pred C-CCEEEEEcCCCccccccCCcceeeccCCCCCCCCcccHHHHHHHHhCCCeEEEEcCCCC---------H-HHH-HHhh
Confidence 4 4799999999998765566653 22455689999999863 234554431 1 223 3899
Q ss_pred CCEEEEEEeCCCccccccCCCCCccCChhHHHHHHHHHHhcCCCEEEEEecCcceeccccccCCCccEEEEecCCCchhH
Q 006224 365 ADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGG 444 (656)
Q Consensus 365 aD~vIv~~G~~~~~~~Eg~Dr~~l~Lp~~Q~~Li~~v~~~~~kpvVvVl~~g~P~~l~~~~~~~~v~AiL~a~~~G~~~g 444 (656)
+|++|||+|.++..++|| ||.+|.||+.|.+||+++++ ++|+|||+++|+|++|.++. ++++|||++|+||+++
T Consensus 477 aD~viv~~g~~~~~e~~g-dr~~l~lp~~q~~li~~v~~--~~~~VvVl~~g~P~~l~~~~--~~~~Ail~a~~pG~~g- 550 (602)
T 1x38_A 477 FSYAIVAVGEHPYTETKG-DNLNLTIPEPGLSTVQAVCG--GVRCATVLISGRPVVVQPLL--AASDALVAAWLPGSEG- 550 (602)
T ss_dssp CSCEEEEEECCCCCGGGG-CCSSCCCCSSSHHHHHHHHT--TSCEEEEEECSSCCCCHHHH--HHCSEEEEEECCCSBT-
T ss_pred CCEEEEEeccCcccccCC-CcCCcCCChhHHHHHHHHHh--CCCEEEEEeCCCceeccchh--hccCeEEeccCCchHH-
Confidence 999999999988888898 99999999999999999986 68999999999999996442 5899999999999997
Q ss_pred HHHHHHHhCCCCCCcccCcccCCccccCCCCCccccccccCCCCCCcccccCCCcccccCcCCCCCC
Q 006224 445 AAIADVLFGRANPGGKLPMTWYPQDYVSRLPMTDMRMRAARGYPGRTYRFYKGPVVFPFGHGMSYTT 511 (656)
Q Consensus 445 ~AlAdVL~G~~nPsGkLPvT~~p~~~~~~~p~~~~~~~~~~~~~~~~Yr~~~~~~~ypFG~GLSYTt 511 (656)
+|+||||||++|||||||+|| |++. +++|.+ .+||||+ |+||||||||||+
T Consensus 551 ~AiadvL~G~~nPsGkLP~t~-p~~~-~~~p~~------------~g~~~~~--plypFG~GLSYt~ 601 (602)
T 1x38_A 551 QGVTDALFGDFGFTGRLPRTW-FKSV-DQLPMN------------VGDAHYD--PLFRLGYGLTTNA 601 (602)
T ss_dssp HHHHHHHTTSSCCCCCCSSCB-CSCG-GGCSCC------------TTCSSCC--CSBCTTCCBCCCC
T ss_pred HHHHHHHcCCCCCCccCcccc-cCcc-ccCCcc------------CCCCCCC--ccCcCCCCcCCCC
Confidence 999999999999999999997 8876 778852 2488885 9999999999996
No 6
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A*
Probab=100.00 E-value=5.6e-94 Score=821.83 Aligned_cols=439 Identities=20% Similarity=0.272 Sum_probs=361.6
Q ss_pred CCCCChHHHH--------HHHHHHHHHHHHhhhcCCCccceeeCccccccCCCCCCc-cccccCCCHHHHHHHHHHHHHH
Q 006224 6 PPFYCSICLD--------TRQLYVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGR-GQETPGEDPVLTGKYAASYVRG 76 (656)
Q Consensus 6 ~~~P~~~~la--------~~~g~~~a~E~ra~~~~Gi~~~~~laP~vdi~r~p~~gr-~~e~fgeDP~l~~~~a~a~v~G 76 (656)
|.||++++|| +++|+++|+|+|++ |+ +++| ||++||.|||+||| ++|+|||||+|+++|+.|||+|
T Consensus 136 t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~---Gi-~~~~-aPvvDv~r~p~~grig~rsfgeDP~lv~~~a~a~v~G 210 (642)
T 3bmx_A 136 TNFPGNMALGAARSRINAYQTGSIIGKELSAL---GI-NTDF-SPVVDINNNPDNPVIGVRSFSSNRELTSRLGLYTMKG 210 (642)
T ss_dssp CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH---TC-CEEC-CCBCCCCCCTTCSSSGGGSSCSSHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHhhCCHHHHHHHHHHHHHHHHHc---CC-CEEE-CCccccCCCCCCCcccccccCCCHHHHHHHHHHHHHH
Confidence 8999999987 89999999999999 77 6665 99999999999997 7899999999999999999999
Q ss_pred HccCCCCCCceEEeeccccccCCC---CCCCCCccccccccCHHHHHhhccHHHHHHHHcCCcceEeec---cccCC---
Q 006224 77 LQGNTGSRLKVAACCKHYTAYDLD---NWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCS---YNQVN--- 147 (656)
Q Consensus 77 ~Q~~~~~~~gV~a~~KHF~g~g~~---~~~~~~r~~~~~~~~~~~L~e~~l~pF~~ai~~g~~~~vM~s---y~~vn--- 147 (656)
+|+. ||++|+|||||||.. +|.+.+ .+++++++|+|+||+||+++|++| +.+|||| ||.+|
T Consensus 211 lq~~-----gV~a~~KHFpg~g~~~~dsh~~~~----~~~~~~~~l~e~~l~PF~~ai~ag-~~~VM~ah~~y~~id~~~ 280 (642)
T 3bmx_A 211 LQRQ-----DIASALKHFPGHGDTDVDSHYGLP----LVSHGQERLREVELYPFQKAIDAG-ADMVMTAHVQFPAFDDTT 280 (642)
T ss_dssp HHHT-----TCEEEEEEETCCTTCSSCTTTSCC----BCCCCHHHHHHTTHHHHHHHHHTT-CCEEEECCCBCTTTCCCE
T ss_pred HHhC-----CceEEeccccCCCCccCCCCCCCc----eeccCHHHHhhhhHHHHHHHHHcC-CCEEEEccccccccCccc
Confidence 9998 899999999999853 333332 346799999999999999999987 8999999 66777
Q ss_pred ----------CcccccCHHHHHHhhhhcCCCCcEEEcChhhhhhhhccccccCChHHHHHHHHHcCCCcCCch-------
Q 006224 148 ----------GKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGP------- 210 (656)
Q Consensus 148 ----------g~pa~~s~~ll~~lLR~e~gf~G~v~SD~~~~~~~~~~~~~~~~~~e~~~~al~AG~D~~~~~------- 210 (656)
|+|||+|++||++|||+||||+|+|||||++|+++... .+..+++++|++||+||+|.+
T Consensus 281 ~~~~~~g~~~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~m~ai~~~----~~~~~a~~~Al~AG~D~~l~~~~~~~~~ 356 (642)
T 3bmx_A 281 YKSKLDGSDILVPATLSKKVMTGLLRQEMGFNGVIVTDALNMKAIADH----FGQEEAVVMAVKAGVDIALMPASVTSLK 356 (642)
T ss_dssp EECTTTSCEEECBGGGCHHHHCCCCCCCSCCCSEEECSCTTSHHHHTT----SCHHHHHHHHHHHTCSBEESCSCCCSGG
T ss_pred cccccccccCcccccCCHHHHHHHhhCcCCCCEEEEeCchhhHHHHhc----CCHHHHHHHHHHcCCCEecccccccccc
Confidence 79999999999999999999999999999999998752 267899999999999998432
Q ss_pred ------hhHHHHHHHHHCCCCCHHHHHHHhhhhHHHHHHhcCCCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHhhcce
Q 006224 211 ------FLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFG--NLGPRDVCTPAHQQLALQAAHQGIV 282 (656)
Q Consensus 211 ------~~~~~l~~av~~g~v~~~~ld~av~Ril~~k~~~Glf~~~p~~~~~~--~~~~~~~~~~~~~~la~~~A~eSiV 282 (656)
.+.+.|.+||++|+|++++||+||+|||++|+++|+|+..|+..... ......+++++|+++|+++|++|||
T Consensus 357 ~~~~~~~~~~~l~~av~~G~i~~~~id~av~RiL~~k~~~gl~~~~p~~~~~~~~~~~~~~~~~~~~~~la~~~a~~siv 436 (642)
T 3bmx_A 357 EEQKFARVIQALKEAVKNGDIPEQQINNSVERIISLKIKRGMYPARNSDSTKEKIAKAKKIVGSKQHLKAEKKLAEKAVT 436 (642)
T ss_dssp GTHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCSSCCCCCCHHHHHHHHHHHTTCHHHHHHHHHHHHHHCE
T ss_pred cchhHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHcCCCcCCCCcccccchhhhhhhcCCHHHHHHHHHHHHhCEE
Confidence 34578999999999999999999999999999999999325421000 0001246789999999999999999
Q ss_pred ecccCCCCCCCcCCCCcEEEEEccCCccccccccccCCCCCccCCHHHHHHHHh---chhhcccCCccccCCcccHHHHH
Q 006224 283 LLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGISRYA---KTIHQAGCFGVACNGNQLIGAAE 359 (656)
Q Consensus 283 LLKN~~~~LPL~~~~~~kIaviGp~a~~~~~~~G~~~g~~~~~~t~le~l~~~~---~~~y~~g~~~~~~~~~~~~~~a~ 359 (656)
||||++++|||++++.+||+||||++.. ..+++++|+++. ...+..++.. .......+++++
T Consensus 437 LLKN~~~~LPL~~~~~~~iaviG~~~~~--------------~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~ 501 (642)
T 3bmx_A 437 VLKNEQHTLPFKPKKGSRILIVAPYEEQ--------------TASIEQTIHDLIKRKKIKPVSLSKM-NFASQVFKTEHE 501 (642)
T ss_dssp EEEEGGGCCSCCCCTTCEEEEEESSHHH--------------HHHHHHHHHHHHHTTSSCCCEEEEE-ECTTCCCCHHHH
T ss_pred EEccCCCcCCCCCCCCCEEEEEeCCccc--------------hhhHHHHHHHhhCCCCeeEEeccCC-CCcchhhHHHHH
Confidence 9999999999986556899999987432 346789998875 2333333211 111124578899
Q ss_pred HHhhcCCEEEEEEeCCCccccccCCCCCccCChhH------------HHHHHHHHHhcCCCEEEEEecCcceeccccccC
Q 006224 360 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ------------QELVSRVAKASRGPVVLVLMCGGPVDVSFAKND 427 (656)
Q Consensus 360 ~~a~~aD~vIv~~G~~~~~~~Eg~Dr~~l~Lp~~Q------------~~Li~~v~~~~~kpvVvVl~~g~P~~l~~~~~~ 427 (656)
++++++|+|||+++.......| .+.+|+.| .+||+++++ .+||+|||+ .|+||+|+|+
T Consensus 502 ~~a~~aDvvIv~~~~~~~~~~e-----~~~l~~~q~~~~~~~~~~~~~~li~~~~~-~~~pvVvv~-~g~P~~l~~~--- 571 (642)
T 3bmx_A 502 KQVKEADYIITGSYVVKNDPVV-----NDGVIDDTISDSSKWATVFPRAVMKAALQ-HNKPFVLMS-LRNPYDAANF--- 571 (642)
T ss_dssp HHHHHCSEEEEEECCSSCCCCE-----ETTEECCCCCSSTTHHHHHHHHHHHHHHH-TTCCEEEEE-CSCGGGGGGC---
T ss_pred HHHhhCCEEEEEecCCCCCchh-----ccCCccccccccccccchhHHHHHHHHHH-cCCCEEEEe-cCChhccccc---
Confidence 9999999999966533111122 34566677 899999976 578988776 5899999987
Q ss_pred CCccEEEEecCC--------CchhHHHHHHHHhCCCCCCcccCcccCCccccCCCCCccccccccCCCCCCcccccCCCc
Q 006224 428 PRIGAILWVGYP--------GQAGGAAIADVLFGRANPGGKLPMTWYPQDYVSRLPMTDMRMRAARGYPGRTYRFYKGPV 499 (656)
Q Consensus 428 ~~v~AiL~a~~~--------G~~~g~AlAdVL~G~~nPsGkLPvT~~p~~~~~~~p~~~~~~~~~~~~~~~~Yr~~~~~~ 499 (656)
++++|||++|++ |+++|+|+||||||++|||||||+|| |++. .| .+|
T Consensus 572 ~~~~Ail~a~~~~G~~~g~~g~~~g~AiadvLfG~~nPsGkLPvt~-p~~~---~~---------------------~~p 626 (642)
T 3bmx_A 572 EEAKALIAVYGFKGYANGRYLQPNIPAGVMAIFGQAKPKGTLPVDI-PSVT---KP---------------------GNT 626 (642)
T ss_dssp TTCSEEEECSCCCCEETTEESCSHHHHHHHHHTTSSCCCCCCSSCE-ECSS---ST---------------------TSE
T ss_pred cccCeEEEEccCcccccccccchHHHHHHHHHcCCCCCCccCceee-eccC---CC---------------------CCc
Confidence 469999999999 79999999999999999999999997 6542 11 269
Q ss_pred ccccCcCCCCCCce
Q 006224 500 VFPFGHGMSYTTFA 513 (656)
Q Consensus 500 ~ypFG~GLSYTtF~ 513 (656)
+||||||||||+|.
T Consensus 627 lfpfG~GLsYt~~~ 640 (642)
T 3bmx_A 627 LYPLGYGLNIKTGR 640 (642)
T ss_dssp EECTTCCBCTTTCS
T ss_pred ccCCCCCccCCCCC
Confidence 99999999999985
No 7
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A*
Probab=100.00 E-value=2e-67 Score=582.47 Aligned_cols=391 Identities=16% Similarity=0.161 Sum_probs=295.0
Q ss_pred cCCCCCChHHHH--------------HHHHHHHHHHHHhhhcCCCccceeeCccccccCCCCCC-ccccccCCCHHHHHH
Q 006224 4 NLPPFYCSICLD--------------TRQLYVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWG-RGQETPGEDPVLTGK 68 (656)
Q Consensus 4 ~~~~~P~~~~la--------------~~~g~~~a~E~ra~~~~Gi~~~~~laP~vdi~r~p~~g-r~~e~fgeDP~l~~~ 68 (656)
+.|.||++++|+ +++|+++|+|+|++ |+ +++| ||++||.|||+|| |++|||||||+++++
T Consensus 102 ~~T~fP~~~alaat~~~d~~~~~~La~~~G~~~a~Elra~---Gi-n~~f-APvvDv~r~P~~g~ig~rsfGEDP~lv~~ 176 (535)
T 3sql_A 102 GATEFPPPMAFGEIWRTDPHQAIALAETMGATTAQEALSL---GI-NWVL-APVLDVNNNPHNPVINIRAFGETPDQVSA 176 (535)
T ss_dssp TSCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH---TC-CEEC-CCBCCCCCCTTCSSSGGGSSCSSHHHHHH
T ss_pred CCCCCCCHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHh---CC-CEEe-cCeeccCCCCCCCCccccCCCCCHHHHHH
Confidence 578999988765 67899999999999 77 6665 9999999999999 689999999999999
Q ss_pred HHHHHHHHHccCCCCCCceEEeeccccccCCCCCCCCCccccccccCHHHHHhhccHHHHHHHHcCCcceEeeccccCC-
Q 006224 69 YAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVN- 147 (656)
Q Consensus 69 ~a~a~v~G~Q~~~~~~~gV~a~~KHF~g~g~~~~~~~~r~~~~~~~~~~~L~e~~l~pF~~ai~~g~~~~vM~sy~~vn- 147 (656)
|+.|||+|+|+. ||+||+|||||||.+..+. ......++.++++|+|+||+||+++|++| +.+||||||.+|
T Consensus 177 ~a~A~v~GlQ~~-----gV~a~~KHFpG~G~~~~Ds-h~~~~~v~~s~~~L~e~~L~PF~~aI~ag-~~sVM~ah~~v~~ 249 (535)
T 3sql_A 177 LGTAFIRGAQQY-----AVLTTAKHFPGHGDTATDS-HLALPTISHDDTRLNTVELPPFKAAIQGG-VDAVMNAHLMIPA 249 (535)
T ss_dssp HHHHHHHHHTTS-----SCBCEEEEETCCCSCSCCT-TTSCCBCCCCHHHHHHTTSHHHHHHHHTT-CSEEEECCCBBTT
T ss_pred HHHHHHHHHhhc-----ccceeeeeecccCCcccCC-ccCCCcCCCCHHHHHHHHHHHHHHHHHcC-CCEEEecCccCCC
Confidence 999999999998 8999999999999643111 11111245799999999999999999977 899999999887
Q ss_pred ---CcccccCHHHHHHhhhhcCCCCcEEEcChhhhhhhhccccccCChHHHHHHHHHcCCCcCCch----hhHHHHHHHH
Q 006224 148 ---GKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGP----FLAIHTEGAV 220 (656)
Q Consensus 148 ---g~pa~~s~~ll~~lLR~e~gf~G~v~SD~~~~~~~~~~~~~~~~~~e~~~~al~AG~D~~~~~----~~~~~l~~av 220 (656)
++|||+|+++|++|||+||||+|+|||||++|+++... .+..|++++|++||+||+|.+ .+.+.|.+||
T Consensus 250 lD~~~PAs~S~~lLtdlLR~e~GF~G~VvSD~l~m~ai~~~----~~~~eaa~~Al~AG~Dm~l~~~~~~~~~~~l~~AV 325 (535)
T 3sql_A 250 WDQQYPATLSPAILTGQLRHKLGFKGLIVTDALVMGGITQF----AAPDTVVVQAIAAGADILLMPPDVDGAIIAIETAI 325 (535)
T ss_dssp TBSSSCGGGCHHHHCCCCCCCSCCCSEEECSCTTSHHHHTT----SCHHHHHHHHHHHTCSBEESCSCHHHHHHHHHHHH
T ss_pred cCCCcCcccCHHHHHHHHHHhcCCCceEEcChhHHHHHHhc----CCHHHHHHHHHHCCCCeecCCCCHHHHHHHHHHHH
Confidence 48999999999999999999999999999999998753 267899999999999997632 3567899999
Q ss_pred HCCCCCHHHHHHHhhhhHHHHHHhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHhhcceecccCCCCCCCc----CC
Q 006224 221 RGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLS----TL 296 (656)
Q Consensus 221 ~~g~v~~~~ld~av~Ril~~k~~~Glf~~~p~~~~~~~~~~~~~~~~~~~~la~~~A~eSiVLLKN~~~~LPL~----~~ 296 (656)
++|+|+++|||+||+|||++|+++|+|+ ++... . ...+++++|+++|+++|++|||| +++|||+ ++
T Consensus 326 ~~G~i~e~rId~av~RIL~~K~~lGl~~-~~~~~----~-~~~~~~~eh~~lA~e~A~eSiVL----~~~LPL~~~~~~~ 395 (535)
T 3sql_A 326 KTGQLSESRIYESVERIWQAKQKILTAT-PSTFP----Q-GISGDRPETRKTVAMVLERATKH----QKSLVKISSFPDN 395 (535)
T ss_dssp HHTSSCHHHHHHHHHHHHHHHHHHHTSC-CCCTT----T-TCCTTCHHHHHHHHHHHHHHCEE----CSSCCCCCCCSTT
T ss_pred HcCCCCHHHHHHHHHHHHHHHHHhcCCC-CCccc----h-hhccCCHHHHHHHHHHHHhCeEE----CCcCCCCcccccC
Confidence 9999999999999999999999999998 43321 1 23678999999999999999999 3599998 34
Q ss_pred CCcEEEEEccCCccccccccccCCCCCccCCHHHHHHHH-hchhhcccCCccccCCcccHHHHHHHhhcCCEEEEEEeCC
Q 006224 297 RHHTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGISRY-AKTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLD 375 (656)
Q Consensus 297 ~~~kIaviGp~a~~~~~~~G~~~g~~~~~~t~le~l~~~-~~~~y~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~~G~~ 375 (656)
+.++|+|||++++.+. +.|.++..++| ++. +++.+...++ +.... .....-.+=+|+-.+
T Consensus 396 ~~~~laVIG~~a~~~~-----~~g~~~~~~~P----~~~G~~~~~~~~~~---------~~~~~-~~~~~~~~q~f~r~~ 456 (535)
T 3sql_A 396 FARNLIVVDSVLKSPF-----LRPNCPAIAIP----QRHGYAAEIVELKT---------LPRLQ-LEAIPTLIQCFLRGN 456 (535)
T ss_dssp SEEEEEEESCGGGCTT-----CCTTCHHHHHH----HTTTEEEEEEETTT---------GGGBC-CCSSCEEEEEEECCC
T ss_pred CCCEEEEECCCCCCcc-----cCCCCCcccCH----HHcCceEEEEcCcc---------ccccc-cCCCCeEEEEeecCC
Confidence 5689999999998764 34444444444 112 2233222211 00000 011222344566444
Q ss_pred CccccccCCCCCccCChhHHHHHHHHHHhcCCCEEEEEecCcceeccccc-cCCCccEEEEecCCCc--hhHHHHHHHHh
Q 006224 376 QSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAK-NDPRIGAILWVGYPGQ--AGGAAIADVLF 452 (656)
Q Consensus 376 ~~~~~Eg~Dr~~l~Lp~~Q~~Li~~v~~~~~kpvVvVl~~g~P~~l~~~~-~~~~v~AiL~a~~~G~--~~g~AlAdVL~ 452 (656)
+...+. . |. .+.++++.+. +.-.-+|+. |+||.+.|+. .++ .|-++|.+|| +++.-+...|+
T Consensus 457 ~f~~~~-------~-~~--~~~~~~l~~~-~~~~~~~~y-g~py~~~~~~~~~~---~~p~~~~~gq~~~~q~~~~~~~~ 521 (535)
T 3sql_A 457 PFTEKL-------A-DP--IDVLQKIAAQ-IPLQGVIFY-GSPYFLEALQTTLP---EIPWWFSYGQMAIAQAEICTSLW 521 (535)
T ss_dssp SSCSSC-------C-CC--HHHHHHHHHH-SCEEEEEEE-ECCTTHHHHHHHCT---TSCEEEESCCSHHHHHHHHHHTC
T ss_pred CCCCCc-------c-hH--HHHHHHHHhc-CceeEEEEe-CChhHHHHHHHHhh---cCCcccCCccCHHHHHHHHHHHh
Confidence 322221 2 22 4567777664 322344444 8999998874 233 4456778887 55566667777
Q ss_pred CC
Q 006224 453 GR 454 (656)
Q Consensus 453 G~ 454 (656)
+.
T Consensus 522 ~~ 523 (535)
T 3sql_A 522 EE 523 (535)
T ss_dssp SS
T ss_pred cc
Confidence 73
No 8
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans}
Probab=100.00 E-value=4.2e-56 Score=471.46 Aligned_cols=230 Identities=19% Similarity=0.262 Sum_probs=195.4
Q ss_pred cCCCCCChHHHH--------HHHHHHHHHHHHhhhcCCCccceeeCccccccCCCCCCccc-cccCCCHHHHHHHHHHHH
Q 006224 4 NLPPFYCSICLD--------TRQLYVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQ-ETPGEDPVLTGKYAASYV 74 (656)
Q Consensus 4 ~~~~~P~~~~la--------~~~g~~~a~E~ra~~~~Gi~~~~~laP~vdi~r~p~~gr~~-e~fgeDP~l~~~~a~a~v 74 (656)
++|.||++++|+ +++|+++|+|+|++ |+ +++| +|++||.|||+|||++ |+|||||+++++|+.|+|
T Consensus 91 ~~t~~P~~~~laat~d~~l~~~~g~~~a~E~ra~---Gi-~~~~-aPv~Dv~r~p~~~rig~RsfgeDP~lv~~~a~a~v 165 (351)
T 3tev_A 91 FWPFAPSAMSLGAADDQQLTEDVNAALARQLRSV---GI-NWNF-TPVLDINVNPANPVIGDRAYGSDAARVTRHGRAAL 165 (351)
T ss_dssp ----CCCHHHHHHHCCHHHHHHHHHHHHHHHHHH---TC-CEEC-CCBCCCCCCTTCCSSGGGSSCSSHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHhcCCHHHHHHHHHHHHHHHHHc---CC-CEec-cceeEeccCCCCCcccccCCCCCHHHHHHHHHHHH
Confidence 578999999987 89999999999999 77 6665 9999999999999975 699999999999999999
Q ss_pred HHHccCCCCCCceEEeeccccccCCCCCCCCCccccccccCHHHHHhhccHHHHHHHHcCCcceEeec---cccCCC-cc
Q 006224 75 RGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCS---YNQVNG-KP 150 (656)
Q Consensus 75 ~G~Q~~~~~~~gV~a~~KHF~g~g~~~~~~~~r~~~~~~~~~~~L~e~~l~pF~~ai~~g~~~~vM~s---y~~vng-~p 150 (656)
+|+|+. ||++|+|||||||.+..+ ..+....+++++++|+|+||+||+++ ++| +.+|||| ||.+|| .|
T Consensus 166 ~Glq~~-----gV~a~~KHFpG~g~~~~d-sh~~~~~~~~s~~~L~e~~l~PF~~a-~ag-~~~VM~aHi~y~~id~~~P 237 (351)
T 3tev_A 166 AGHTRE-----GVAPCAKHFPGHGDTHQD-SHLALPRVSKSRAELDAGELAPFRAL-LPE-TPAIMTAHIVYDALDAEHP 237 (351)
T ss_dssp HHHHTT-----TCEECEEEETCCTTCBCS-STTSCCEECCCHHHHHHTTTHHHHHH-GGG-CSEEEECSCEETTTBSSSC
T ss_pred HHHHHc-----CCeEEeeeccCCCCCcCC-CCcCCCcCCCCHHHHHHhhhHHHHHH-hcC-CCEEEecceEecCCCCCcC
Confidence 999998 899999999999964311 11111245789999999999999999 665 8999999 889998 69
Q ss_pred cccCHHHHHHhhhhcCCCCcEEEcChhhhhhhhccccccCChHHHHHHHHHcCCCcCCch-------hhHHHHHHHHHCC
Q 006224 151 TCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGP-------FLAIHTEGAVRGG 223 (656)
Q Consensus 151 a~~s~~ll~~lLR~e~gf~G~v~SD~~~~~~~~~~~~~~~~~~e~~~~al~AG~D~~~~~-------~~~~~l~~av~~g 223 (656)
||+|+++|++|||+||||+|+|||||++|+++...+ +..+++++|++||+||+|.+ .+.+.|.++|++
T Consensus 238 a~~s~~ll~~lLR~elGF~G~VvSD~~~m~~i~~~~----~~~~~~~~Al~AG~D~~l~~~~~~~~~~~~~~l~~av~~- 312 (351)
T 3tev_A 238 ATLSPRILTGLLREEWGYDGVIVTDSMGMQAIDANY----GRGEAAVRALRAGADLVMALGRREVQQATLAAVAEYVPE- 312 (351)
T ss_dssp GGGCHHHHCCCCCCCSCCCSEEEECCTTSHHHHHHS----CHHHHHHHHHHHTCSBEECCSSHHHHHHHHHHHHHHGGG-
T ss_pred ccCCHHHHHHHHHhhcCCCeEEEeccchHHHHHhcC----CHHHHHHHHHHcCCCEECCCCChhHHHHHHHHHHHHHhC-
Confidence 999999999999999999999999999999987532 46789999999999999842 135678899998
Q ss_pred CCCHHHHHHHhhhhHHHHHHhcCCCCCCCCC
Q 006224 224 LLREEDVNLALAYTITVQMRLGMFDGEPSAQ 254 (656)
Q Consensus 224 ~v~~~~ld~av~Ril~~k~~~Glf~~~p~~~ 254 (656)
++++||+||+|||++|+++|+|+ +||.+
T Consensus 313 --~~~~id~av~RIL~~k~~~g~f~-~Py~~ 340 (351)
T 3tev_A 313 --NQAAVATKRERLRALARRFPAQA-DETLD 340 (351)
T ss_dssp --CHHHHHHHHHHHHHHHHHSCCCC------
T ss_pred --cHHHHHHHHHHHHHHHHHhCCCC-CCCCC
Confidence 99999999999999999999999 78754
No 9
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A*
Probab=100.00 E-value=1.2e-48 Score=413.28 Aligned_cols=223 Identities=16% Similarity=0.209 Sum_probs=188.1
Q ss_pred cCCCCCChHHHH------------HHHHHHHHHHHHhhhcCCCccceeeCccccccC-CCCCCccccccCCCHHHHHHHH
Q 006224 4 NLPPFYCSICLD------------TRQLYVVSDEARAMYNGGMAGLTYWSPNVNIFR-DPRWGRGQETPGEDPVLTGKYA 70 (656)
Q Consensus 4 ~~~~~P~~~~la------------~~~g~~~a~E~ra~~~~Gi~~~~~laP~vdi~r-~p~~gr~~e~fgeDP~l~~~~a 70 (656)
++|.||++++|+ +++|+++|+|+|++ || +++| +|++||.| +|.|| +|+|||||+++++|+
T Consensus 74 g~t~fP~~~~lgat~d~~~~~~la~~~g~~~a~Elra~---Gi-n~~f-aPv~Dv~r~~~~ig--~rsfgeDP~lv~~~a 146 (349)
T 4gvf_A 74 GFTRLPAAQSFFALHGLEEGGRLAQEAGWLMASEMIAM---DI-DISF-APVLDVGHISAAIG--ERSYHADPAKALAMA 146 (349)
T ss_dssp TSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---TC-CEEC-CCBCCCCSCCTTTG--GGSSCSSHHHHHHHH
T ss_pred CCCCCccHHHHHHhcCcchHHHHHHHHHHHHHHHHHHc---CC-CEEe-cCcccCCCCCCCCc--CcCCCCCHHHHHHHH
Confidence 689999998754 68899999999999 77 6665 99999998 57665 899999999999999
Q ss_pred HHHHHHHccCCCCCCceEEeeccccccCCCCCCCCCccccccccCHHHHHhhccHHHHHHHHcCCcceEeec---cccCC
Q 006224 71 ASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCS---YNQVN 147 (656)
Q Consensus 71 ~a~v~G~Q~~~~~~~gV~a~~KHF~g~g~~~~~~~~r~~~~~~~~~~~L~e~~l~pF~~ai~~g~~~~vM~s---y~~vn 147 (656)
.|+|+|+|+. ||++|+|||||||.+..+.+ ......+.+.++|+|+||+||+.+|++|++.+|||| ||.+|
T Consensus 147 ~a~v~Glq~~-----GV~a~~KHFpG~G~~~~dsh-~~~~v~~~s~~el~~~~l~PF~~aI~~g~~~~VM~aHv~y~~id 220 (349)
T 4gvf_A 147 TRFIDGMHDA-----GMKTTGKHFPGHGAVTADSH-KETPCDPRPETDIRGKDMSVFRTLISENKLDAIMPAHVIYRAID 220 (349)
T ss_dssp HHHHHHHHHH-----TCCCEEEEETCCTTCCCCSS-SSCCBCCCCHHHHHHTHHHHHHHHHHTTCCSEEEECSCBCTTTC
T ss_pred HHHHHHHHHc-----CceeeecccccCCCcccCCC-CCCCCCCcCHHHHHHHHhHHHHHHHHcCCCCeEeecccccCCCC
Confidence 9999999998 89999999999997542211 111113457899999999999999999889999999 99999
Q ss_pred CcccccCHHHHHHhhhhcCCCCcEEEcChhhhhhhhccccccCChHHHHHHHHHcCCCcCCch---hhHHHHHHHHHCCC
Q 006224 148 GKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGP---FLAIHTEGAVRGGL 224 (656)
Q Consensus 148 g~pa~~s~~ll~~lLR~e~gf~G~v~SD~~~~~~~~~~~~~~~~~~e~~~~al~AG~D~~~~~---~~~~~l~~av~~g~ 224 (656)
|.|||+|+++|++|||+||||+|+|||||++|+++. ...+..+++++|++||+||+|.+ .....+.+++..
T Consensus 221 ~~Pa~~S~~ll~~lLR~elGF~G~VvSD~l~m~~~~----~~~~~~eaa~~Al~AG~Dm~l~~~~~~~~~~~l~al~~-- 294 (349)
T 4gvf_A 221 PRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAA----IMGSYAERAQASLDAGCDMILVCNNRKGAVSVLDNLSP-- 294 (349)
T ss_dssp SSCGGGCHHHHCCCCCCCTCCCSEEEEEEGGGCCCG----GGCCHHHHHHHHHHHTCSEEEECSCHHHHHHHHHHSCC--
T ss_pred CCCCcCCHHHHHHHHHHhcCCCEEEEecCCcccccc----ccCCHHHHHHHHHHcCCCEEcCCCCHHHHHHHHHHhhh--
Confidence 999999999999999999999999999999998763 24578899999999999999853 234567777765
Q ss_pred CCHHHHHHHhhhhHHHHHHhc
Q 006224 225 LREEDVNLALAYTITVQMRLG 245 (656)
Q Consensus 225 v~~~~ld~av~Ril~~k~~~G 245 (656)
++++|+++++.|++.-.+.++
T Consensus 295 ~~~~r~~~~~~r~~~~~~~l~ 315 (349)
T 4gvf_A 295 IKAERVTRLYHKGSFSRRELM 315 (349)
T ss_dssp CCCGGGGGGCCCCCCCHHHHH
T ss_pred ccHHHHHHHhhcCCCCHHHHh
Confidence 788999999988766555554
No 10
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A
Probab=100.00 E-value=1.2e-48 Score=412.74 Aligned_cols=220 Identities=16% Similarity=0.178 Sum_probs=187.9
Q ss_pred cCCCCCChH---------HHHHHHHHHHHHHHHhhhcCCCccceeeCccccccCCCCCCccccccCCCHHHHHHHHHHHH
Q 006224 4 NLPPFYCSI---------CLDTRQLYVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYV 74 (656)
Q Consensus 4 ~~~~~P~~~---------~la~~~g~~~a~E~ra~~~~Gi~~~~~laP~vdi~r~p~~gr~~e~fgeDP~l~~~~a~a~v 74 (656)
++|.||+++ .|++++|+++|+|+|++ || +++| +|++||.|+ +|.|+.|+|||||+++++|+.|+|
T Consensus 74 ~~t~fP~~~~laa~d~~~~la~~~g~~~a~E~ra~---Gi-~~~~-aPv~Dv~~~-~~~ig~rsfgeDP~lv~~~a~a~v 147 (340)
T 2oxn_A 74 GFSRIPPAQYYARAENGVELAEQGGWLMAAELIAH---DV-DLSF-APVLDMGFA-CKAIGNRAFGEDVQTVLKHSSAFL 147 (340)
T ss_dssp TSCCCCCGGGGGGSTTHHHHHHHHHHHHHHHHHTT---TC-CEEC-CCBCCCCSC-STTTGGGSSCSSHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHhCCCcHHHHHHHHHHHHHHHHHHh---CC-CEEe-cCccCCCCC-CCcCcCCCCCCCHHHHHHHHHHHH
Confidence 589999874 56799999999999999 77 6665 999999999 888889999999999999999999
Q ss_pred HHHccCCCCCCceEEeeccccccCCCCCCCCCcccccccc-CHHHHHhhccHHHHHHHHcCCcceEeec---cccCCCcc
Q 006224 75 RGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARV-SKQDLEDTYNVPFKACVVEGKVASVMCS---YNQVNGKP 150 (656)
Q Consensus 75 ~G~Q~~~~~~~gV~a~~KHF~g~g~~~~~~~~r~~~~~~~-~~~~L~e~~l~pF~~ai~~g~~~~vM~s---y~~vng~p 150 (656)
+|+|+. ||++|+|||||||.+..+ ++ .+..+ +.++| |+||+||+++|++|++.+|||| ||.+||+|
T Consensus 148 ~Glq~~-----gV~a~~KHFpG~G~~~~d---sh-~~~~v~~~~~l-~~~l~PF~~ai~~g~~~~VM~aHv~y~~id~~P 217 (340)
T 2oxn_A 148 RGMKAV-----GMATTGKHFPGHGAVIAD---SH-LETPYDERETI-AQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQP 217 (340)
T ss_dssp HHHHHT-----TCCCEEEEETCCTTCCSC---CS-SSSCBCCCSCC-HHHHHHHHHHHHHTCCSEEEECSCBBTTTBSSC
T ss_pred HHHHHC-----CceeeeccCcCCCCccCC---CC-CCCccCCHHHH-HHHHHHHHHHHHcCCCCeeeeccccccccCCcC
Confidence 999998 899999999999976421 21 12222 33889 9999999999999888999999 99999999
Q ss_pred cccCHHHHHHhhhhcCCCCcEEEcChhhhhhhhccccccCChHHHHHHHHHcCCCcCCch---hhHHHHHHHHHCCCCCH
Q 006224 151 TCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGP---FLAIHTEGAVRGGLLRE 227 (656)
Q Consensus 151 a~~s~~ll~~lLR~e~gf~G~v~SD~~~~~~~~~~~~~~~~~~e~~~~al~AG~D~~~~~---~~~~~l~~av~~g~v~~ 227 (656)
||+|+++|++|||+||||+|+|||||++|+++.. ..+..+++++|++||+||+|.+ .....+.++++ .+++
T Consensus 218 a~~s~~ll~~lLR~elGF~G~VvSD~l~m~~~~~----~~~~~ea~~~Al~AG~Dm~l~~~~~~~~~~~~~av~--~~~~ 291 (340)
T 2oxn_A 218 ASGSSYWLKQVLREELGFKGIVFSDDLSMEGAAV----MGGPVERSHQALVAGCDMILICNKREAAVEVLDNLP--IMEV 291 (340)
T ss_dssp GGGCHHHHTCCCCCCTCCCSEEEEEEGGGSCHHH----HCSHHHHHHHHHHHTCSEEECCSCHHHHHHHHHHSC--CCCC
T ss_pred cccCHHHHHHHhhcccCCCeEEEcccchhhhhhc----cCCHHHHHHHHHHcCCCEEcCCCCHHHHHHHHHHHH--HhhH
Confidence 9999999999999999999999999999987643 3477899999999999999853 34567788884 4899
Q ss_pred HHHHHHhhhhHHHHHHhc
Q 006224 228 EDVNLALAYTITVQMRLG 245 (656)
Q Consensus 228 ~~ld~av~Ril~~k~~~G 245 (656)
+|+++++.|+....++++
T Consensus 292 ~Rl~~~~~~~~~~~~~l~ 309 (340)
T 2oxn_A 292 PQAEALLKKQQFSYSELK 309 (340)
T ss_dssp GGGGGGSCSCCCCHHHHH
T ss_pred HHHHHHhhcccccHHHHh
Confidence 999999998865444544
No 11
>4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A*
Probab=100.00 E-value=6.5e-48 Score=407.87 Aligned_cols=219 Identities=19% Similarity=0.191 Sum_probs=179.8
Q ss_pred cCCCCCChHHHH--------------HHHHHHHHHHHHhhhcCCCccceeeCccccccCCCCCCccccccCCCHHHHHHH
Q 006224 4 NLPPFYCSICLD--------------TRQLYVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLTGKY 69 (656)
Q Consensus 4 ~~~~~P~~~~la--------------~~~g~~~a~E~ra~~~~Gi~~~~~laP~vdi~r~p~~gr~~e~fgeDP~l~~~~ 69 (656)
++|.||++++|+ +++|+++|+|+|++ || +++| +|++||..++.+-++.|+|||||+++++|
T Consensus 84 g~t~fP~~~~laat~d~d~~~~~~la~~~g~~~a~El~a~---Gi-~~~~-aPv~Dv~~gr~~~iG~rsfgeDP~lv~~~ 158 (348)
T 4g6c_A 84 GFTVLPAMRRLGELWDRDVLLATKVATAVGYILAAELRAC---GI-DMSF-TPVLDLDYGHSKVIGDRAFHRDPRVVTLL 158 (348)
T ss_dssp TCCCCCCHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT---TC-CEEC-CCBCCCCCSCCTTTGGGSCCSSHHHHHHH
T ss_pred CCCCCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHc---CC-CEee-cCccCCCCCCCCCccCcCCCCCHHHHHHH
Confidence 689999988765 67899999999999 77 6665 99999984444445579999999999999
Q ss_pred HHHHHHHHccCCCCCCceEEeeccccccCCCCCCCCCccccccccCHHHHHhhccHHHHHHHHcCCcceEeec---cccC
Q 006224 70 AASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCS---YNQV 146 (656)
Q Consensus 70 a~a~v~G~Q~~~~~~~gV~a~~KHF~g~g~~~~~~~~r~~~~~~~~~~~L~e~~l~pF~~ai~~g~~~~vM~s---y~~v 146 (656)
+.|+|+|+|+. ||++|+|||||||.+..+.+ ........+.++|++.||+||+++ ++| +.+|||| ||.+
T Consensus 159 a~A~v~Glq~~-----GV~a~~KHFpG~G~~~~dsh-~~~~v~~~~~~el~~~~l~PF~~a-~ag-~~~VM~aHv~y~~i 230 (348)
T 4g6c_A 159 AKSLNHGLSLA-----GMANCGKHFPGHGFAEADSH-VALPTDDRTLDAILEQDVAPYDWL-GLS-LAAVIPAHVIYTQV 230 (348)
T ss_dssp HHHHHHHHHHT-----TCCCCEEEETCSSSCCC-----CCCEECCCHHHHHHTTSHHHHHH-GGG-CCEEEECSCEETTT
T ss_pred HHHHHHHHHhc-----CCceeeCCCCCCCCccCCCC-CCCCcCCCCHHHHHHHHHHHHHHH-hcC-CCeEEecceeecCC
Confidence 99999999998 89999999999997542111 000112346778888899999999 766 8999999 9999
Q ss_pred CCcccccCHHHHHHhhhhcCCCCcEEEcChhhhhhhhccccccCChHHHHHHHHHcCCCcCCch---hhHHHHHHHHHCC
Q 006224 147 NGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGP---FLAIHTEGAVRGG 223 (656)
Q Consensus 147 ng~pa~~s~~ll~~lLR~e~gf~G~v~SD~~~~~~~~~~~~~~~~~~e~~~~al~AG~D~~~~~---~~~~~l~~av~~g 223 (656)
||+|||+|+++|++|||+||||+|+|||||++|+++.. ..+..+++++|++||+||+|.+ .....+.++++.
T Consensus 231 d~~Pa~~S~~ll~~lLR~elGF~G~VvSD~l~m~~~~~----~~~~~e~a~~Al~AG~Dm~l~~~~~~~~~~~~~al~~- 305 (348)
T 4g6c_A 231 DKRPAGFSRVWLQDILRGKLGFTGAIFSDDLSMEAARE----GGTLTQAADAALAAGCDMVLVCNQPDAAEVVLNGLKA- 305 (348)
T ss_dssp CSSCGGGCHHHHCCCCCCCSCCCSEEEEEETTCGGGGT----TCCHHHHHHHHHHHTCSEEECCSCHHHHHHHHHHCCC-
T ss_pred CCccccCCHHHHHHHHhhccCCCeEEEccCCchhhhhh----cCCHHHHHHHHHHcCCCEECCCCChHHHHHHHHHhhc-
Confidence 99999999999999999999999999999999987643 4578899999999999999854 345567777754
Q ss_pred CCCHHHHHHHhhhhHHHHHHh
Q 006224 224 LLREEDVNLALAYTITVQMRL 244 (656)
Q Consensus 224 ~v~~~~ld~av~Ril~~k~~~ 244 (656)
+.++++++||++++.|.
T Consensus 306 ----~~~~~~~~Ri~~l~~r~ 322 (348)
T 4g6c_A 306 ----RASAESVRRIKRMRARG 322 (348)
T ss_dssp ------CHHHHHHHHTTSCCS
T ss_pred ----ccchHHHHHHHHHHhcc
Confidence 56789999999988763
No 12
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=96.68 E-value=0.0042 Score=55.80 Aligned_cols=50 Identities=14% Similarity=0.157 Sum_probs=40.9
Q ss_pred cEEEEEEEEeCCCCC-cceEEEEEEeCCCCCCCchhhhhcccccccCCCCeEEEEEEecC
Q 006224 556 SLGLHVDIKNTGDMA-GTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHV 614 (656)
Q Consensus 556 ~~~v~v~VtNtG~~~-G~evvQlY~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~ 614 (656)
.++++|+|+|.|..+ +.--|.||+... +.+=+.+.|+||+|++|+|.+.+
T Consensus 34 ~~ti~vtV~N~G~~~a~~~~V~lyvng~---------~v~t~~v~La~G~s~tv~f~~~~ 84 (127)
T 3idu_A 34 LAEYEVHVKNLGGIGVPSTKVRVYINGT---------LYKNWTVSLGPKEEKVLTFNWTP 84 (127)
T ss_dssp CEEEEEEEEECSSSCEEEEEEEEEETTE---------EEEEEEEEECTTCEEEEEEEECC
T ss_pred EEEEEEEEEECCCCccCCcEEEEEECCE---------EEeeEEeccCCCCeEEEEEEEEc
Confidence 689999999999985 778899999442 33334557999999999999987
No 13
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=96.12 E-value=0.0032 Score=55.98 Aligned_cols=55 Identities=16% Similarity=0.259 Sum_probs=41.1
Q ss_pred cEEEEEEEEeCCCC-CcceEEEEEEeCCCCCCCchhhhhccccc-ccCCCCeEEEEEEecC
Q 006224 556 SLGLHVDIKNTGDM-AGTHTLLVFAKPPAGNWSPNKQLIGFKKV-HVTAGALQSVRLDIHV 614 (656)
Q Consensus 556 ~~~v~v~VtNtG~~-~G~evvQlY~~~~~~~~~P~k~L~gF~kv-~L~pGes~~V~~~l~~ 614 (656)
.++++++|+|.|.. ++.--|.+|+..|.....++ |-..| .|+||+|.+++|++..
T Consensus 17 ~vTvsatVkN~Gt~~s~a~~V~~yl~~p~~gg~~v----gt~tv~~LaaG~s~t~~v~~~~ 73 (122)
T 2kut_A 17 EITVSARVTNRGAAEAHNVPVAVYLGNPAQGGVEI----GRDTISRIPVGGTGLARVQWKA 73 (122)
T ss_dssp EEEEEEEEECCSSSCBCCCCEEECSSCTTTCCCCC----BCCCCSCBCTTCEEECCEEEEC
T ss_pred eEEEEEEEEeCCCcccCcEEEEEEeCCCccCCeEE----eeEEccccCCCCeEEEEEEEec
Confidence 79999999999988 56778999999976544333 33335 5999999995555443
No 14
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=95.76 E-value=0.028 Score=49.32 Aligned_cols=61 Identities=10% Similarity=0.193 Sum_probs=48.5
Q ss_pred cEEEEEEEEeCCCC-CcceEEEEEEeCCCCCCCchhhhhccccc-ccCCCCeEEEEEEecCCCCceEEeCCCCEEecCeE
Q 006224 556 SLGLHVDIKNTGDM-AGTHTLLVFAKPPAGNWSPNKQLIGFKKV-HVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGE 633 (656)
Q Consensus 556 ~~~v~v~VtNtG~~-~G~evvQlY~~~~~~~~~P~k~L~gF~kv-~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G~ 633 (656)
.++++++|+|.|.. ++.-.|-||+.. .+.+...| .|.+|+|++|+|.+.+ +. ++|.
T Consensus 20 ~~ti~atVkN~G~~~a~~~~V~ly~~g---------~~v~t~~v~~LaaG~s~tv~~~w~~-~~------------~~G~ 77 (114)
T 2l0d_A 20 VNTMTATIENQGNKDSTSFNVSLLVDG---------IVVDTQTVTSLESENSTNVDFHWTL-DG------------TANS 77 (114)
T ss_dssp EEEEEEEEEECSSSCBCCEEEEEEETT---------EEEEEEEESCBCBTCEEEEEEEEEC-CC------------SCSE
T ss_pred eEEEEEEEEECCCCCCCCEEEEEEECC---------EEEcceecccccCCCEEEEEEEEee-cC------------cCce
Confidence 69999999999986 577889999854 35666677 5999999999998876 21 3588
Q ss_pred EEEEE
Q 006224 634 HSLHI 638 (656)
Q Consensus 634 y~i~v 638 (656)
|+|.+
T Consensus 78 ytl~a 82 (114)
T 2l0d_A 78 YTLTV 82 (114)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88766
No 15
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=93.02 E-value=0.38 Score=42.43 Aligned_cols=68 Identities=10% Similarity=0.092 Sum_probs=47.1
Q ss_pred cEEEEEEEEeCCCCCc------ceEEEEEEeCCCCC-------CCchhhhhcccccccCCCCeEEEEEEecCCCCceEEe
Q 006224 556 SLGLHVDIKNTGDMAG------THTLLVFAKPPAGN-------WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVD 622 (656)
Q Consensus 556 ~~~v~v~VtNtG~~~G------~evvQlY~~~~~~~-------~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d 622 (656)
.+.+.++|+|.|+.+= ---..+.+.+..+. .+---| .+..+.|+|||+.+.+++++.
T Consensus 19 ~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQ--a~~~~tl~pGE~~~f~~~w~~-------- 88 (120)
T 3isy_A 19 QIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQ--AFQNLTLESGETYDFSDVWKE-------- 88 (120)
T ss_dssp CEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCC--CCEEEEECTTCEEEEEEEESS--------
T ss_pred eEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhh--hhceEEECCCCEEEEEEEeCC--------
Confidence 6999999999999641 11134555554431 222222 667788999999999999982
Q ss_pred CCCCEEecCeEEEEEE
Q 006224 623 KFGIRRIPMGEHSLHI 638 (656)
Q Consensus 623 ~~~~~~~~~G~y~i~v 638 (656)
.++||.|++.+
T Consensus 89 -----~~~pG~Ytl~a 99 (120)
T 3isy_A 89 -----VPEPGTYEVKV 99 (120)
T ss_dssp -----CCCSEEEEEEE
T ss_pred -----CCCCccEEEEE
Confidence 45799999854
No 16
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=86.89 E-value=0.95 Score=50.76 Aligned_cols=104 Identities=13% Similarity=0.099 Sum_probs=64.2
Q ss_pred cccccCcCCCCCCceecCCccCCCccccccccccccccccccccccccccccCCCCccEEEEEEEEeCCC--CCcceEEE
Q 006224 499 VVFPFGHGMSYTTFAHTLSKAPNQFSVPIATSLYAFKNTTISSNAIRVAHTNCNDAMSLGLHVDIKNTGD--MAGTHTLL 576 (656)
Q Consensus 499 ~~ypFG~GLSYTtF~ys~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~VtNtG~--~~G~evvQ 576 (656)
.+|..|.|+.|..|..+.|..... |+.. ..+.+.. +. +.+|+++|+|.+. ++|.+++
T Consensus 337 ~~ye~~~~i~~~~~~~~~l~~~~~------------~~~~---~~~~~~~----g~-~~~~~~~vtn~~~~~~~~~~~~- 395 (601)
T 1w8o_A 337 LLYEPGTGIRYANFNLAWLGGICA------------PFTI---PDVALEP----GQ-QVTVPVAVTNQSGIAVPKPSLQ- 395 (601)
T ss_dssp EEECCSSEEEEEEECHHHHTBCSC------------CEEC---CCEEECT----TC-EEEEEEEEECCSSSCBSSCEEE-
T ss_pred EEEecCCcceEEEecHHHhccccC------------CCcC---ccceecC----Cc-eeEEEEEEECCCceeccCceEE-
Confidence 467777788888888776653210 0000 0111111 12 7899999999977 6888877
Q ss_pred EEEeCCCCCCCchhhhhcccccccCCCCeEEEEEEecCCCCceEEeCCCCEEecCeEEEEEEecCC
Q 006224 577 VFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIGDLK 642 (656)
Q Consensus 577 lY~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G~y~i~vG~ss 642 (656)
||+........ .-..++||++.++.|+|.. .+- +++|.|.+-+.-.+
T Consensus 396 ~~~~~~~~~~~--------~~~~~~~g~~~t~~~~vt~-~~~----------~~~g~y~l~~~~~~ 442 (601)
T 1w8o_A 396 LDASPDWQVQG--------SVEPLMPGRQAKGQVTITV-PAG----------TTPGRYRVGATLRT 442 (601)
T ss_dssp EECCTTSEEEE--------EECCBCTTCEEEEEEEEEC-CTT----------CCCEEEEEEEEEEE
T ss_pred EecCCCcEEec--------cccccCCCCceEEEEEEec-CCC----------CCCCcEEeeEEEEe
Confidence 88743332111 2267899999999888876 331 45678877665433
No 17
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=86.27 E-value=1.1 Score=37.74 Aligned_cols=52 Identities=23% Similarity=0.291 Sum_probs=31.6
Q ss_pred EEEEEEEEeCCCCCcceEEEEEEeCCCCCCCc-----hhhhhcc-------cccccCCCCeEEEEEEe
Q 006224 557 LGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSP-----NKQLIGF-------KKVHVTAGALQSVRLDI 612 (656)
Q Consensus 557 ~~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P-----~k~L~gF-------~kv~L~pGes~~V~~~l 612 (656)
-+++++|+|||+++ +|+=-...--...| ...=.|| .-|..+|||+++|++.=
T Consensus 20 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~LV~ 83 (101)
T 4ep8_B 20 ATCRVVVENHGDRP----IQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELVA 83 (101)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEEEE
T ss_pred CEEEEEEEeCCCcc----eEEccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEEEE
Confidence 47899999999999 88832221110111 1111222 34677999999998753
No 18
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=86.04 E-value=1.5 Score=45.40 Aligned_cols=55 Identities=13% Similarity=0.245 Sum_probs=38.2
Q ss_pred cEEEEEEEEeCCCCCcceEEEE---------EEeCCCCC--CCchhhhhcccccc------cCCCCeEEEEEEecC
Q 006224 556 SLGLHVDIKNTGDMAGTHTLLV---------FAKPPAGN--WSPNKQLIGFKKVH------VTAGALQSVRLDIHV 614 (656)
Q Consensus 556 ~~~v~v~VtNtG~~~G~evvQl---------Y~~~~~~~--~~P~k~L~gF~kv~------L~pGes~~V~~~l~~ 614 (656)
+++++++|||.|+.+ |+| |+.+.... ..-.++|.+.+... ++|||+++|+++...
T Consensus 265 ~l~~~~~VtN~g~~p----vrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~pI~PGETr~~~v~a~d 336 (382)
T 1yew_A 265 AMRMKLTITNHGNSP----IRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSPLAPGETRTVDVTASD 336 (382)
T ss_dssp EEEEEEEEEECSSSC----EEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSCBCTTCEEEEEEEEEC
T ss_pred EEEEEEEEEcCCCCc----eEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCCcCCCceeEEEEEeeh
Confidence 799999999999866 676 44432211 22345666554433 899999999999864
No 19
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.89 E-value=2.8 Score=35.69 Aligned_cols=61 Identities=11% Similarity=0.154 Sum_probs=37.3
Q ss_pred cEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCchhhhhcccccccCCCCeEEEEEEecCCCCceEEe
Q 006224 556 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVD 622 (656)
Q Consensus 556 ~~~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d 622 (656)
..+.+++++|+|+.... .-+....... ...--....+-.|+||++.+|++++.+ +....++
T Consensus 27 ~~~~~~~l~N~g~~p~~----~~~~~~~~~~-~~~f~v~p~~g~i~pg~~~~i~V~f~~-~~~g~f~ 87 (112)
T 2e6j_A 27 AHCYEAILYNKGSIDAL----FNMTPPTSAL-GACFVFSPKEGIIEPSGVQAIQISFSS-IILGNFE 87 (112)
T ss_dssp CEEEEEEEEECCSSCEE----EEECCCSSHH-HHHCEEESSEEEECTTBCCEEEEEECC-CCCEEEE
T ss_pred EEEEEEEEEECCcceEE----EEEecCCccc-cCcEEEECCcCEECCCCEEEEEEEEEC-CCcceEE
Confidence 46889999999998622 2221111100 000011234556999999999999998 6666654
No 20
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=84.75 E-value=1 Score=47.07 Aligned_cols=62 Identities=18% Similarity=0.165 Sum_probs=35.7
Q ss_pred cEEEEEEEEeCCCCCc------------ceEEEEEEeC---CCCC---CCchhhhhcccccccCCCCeEEEEEEecCCCC
Q 006224 556 SLGLHVDIKNTGDMAG------------THTLLVFAKP---PAGN---WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKH 617 (656)
Q Consensus 556 ~~~v~v~VtNtG~~~G------------~evvQlY~~~---~~~~---~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ 617 (656)
.+.|.++|||+|+.+= .+.++|+-.. |... .+..-.+..| +.|+||||.+++|+|....+
T Consensus 37 ~~~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f--~~L~pG~Sve~~~dla~~yd 114 (343)
T 2x3c_A 37 DVRVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDF--QLLKAGQSLTVQAEVSGLYD 114 (343)
T ss_dssp CCEEEEEEEECSSSCEEEEGGGSCSSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGE--EEECTTCEEEEEEECTTTBT
T ss_pred CeEEEEEEEeCCCCceEeeccCCCCcCccceEEEEeCCcccceeeEEEeccCCChhhc--EEeCCCCeEEEEEehhhccc
Confidence 4789999999998651 1234443111 1101 0111122333 45899999999999975345
Q ss_pred ce
Q 006224 618 LS 619 (656)
Q Consensus 618 ls 619 (656)
|+
T Consensus 115 Ls 116 (343)
T 2x3c_A 115 MS 116 (343)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 21
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=83.72 E-value=1.7 Score=38.69 Aligned_cols=15 Identities=20% Similarity=0.412 Sum_probs=13.6
Q ss_pred ccCCCCeEEEEEEec
Q 006224 599 HVTAGALQSVRLDIH 613 (656)
Q Consensus 599 ~L~pGes~~V~~~l~ 613 (656)
.|.||||.+|+|+++
T Consensus 86 ~l~pGet~svtf~~~ 100 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVS 100 (129)
T ss_dssp CBCTTCEEEEEEEGG
T ss_pred EECCCCEEEEEEecc
Confidence 479999999999986
No 22
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=82.25 E-value=2.2 Score=37.34 Aligned_cols=52 Identities=19% Similarity=0.134 Sum_probs=31.9
Q ss_pred EEEEEEEEeCCCCCcceEEEEEEeCCCCCCCc-----hhhhhcc-------cccccCCCCeEEEEEEe
Q 006224 557 LGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSP-----NKQLIGF-------KKVHVTAGALQSVRLDI 612 (656)
Q Consensus 557 ~~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P-----~k~L~gF-------~kv~L~pGes~~V~~~l 612 (656)
-+++++|+|||+++ ||+=-...--...| ...=.|| .-|..+|||+++|++.=
T Consensus 26 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 89 (126)
T 4ac7_B 26 EKTTIRVSNTGDRP----IQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTE 89 (126)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred cEEEEEEEeCCCCC----EEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEE
Confidence 47899999999999 88832221111111 1111222 34667999999998754
No 23
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=82.25 E-value=2.2 Score=37.34 Aligned_cols=52 Identities=19% Similarity=0.134 Sum_probs=31.9
Q ss_pred EEEEEEEEeCCCCCcceEEEEEEeCCCCCCCc-----hhhhhcc-------cccccCCCCeEEEEEEe
Q 006224 557 LGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSP-----NKQLIGF-------KKVHVTAGALQSVRLDI 612 (656)
Q Consensus 557 ~~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P-----~k~L~gF-------~kv~L~pGes~~V~~~l 612 (656)
-+++++|+|||+++ ||+=-...--...| ...=.|| .-|..+|||+++|++.=
T Consensus 26 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 89 (126)
T 4ubp_B 26 EKTTIRVSNTGDRP----IQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTE 89 (126)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred cEEEEEEEeCCCCC----EEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEE
Confidence 47899999999999 88832221111111 1111222 34667999999998754
No 24
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=79.37 E-value=3.4 Score=36.59 Aligned_cols=55 Identities=24% Similarity=0.394 Sum_probs=33.9
Q ss_pred EEEEEEEeCCCCC----cceEEEEEEeCCCCC------CCchh--------hhhcccccccCCCCeEEEEEEec
Q 006224 558 GLHVDIKNTGDMA----GTHTLLVFAKPPAGN------WSPNK--------QLIGFKKVHVTAGALQSVRLDIH 613 (656)
Q Consensus 558 ~v~v~VtNtG~~~----G~evvQlY~~~~~~~------~~P~k--------~L~gF~kv~L~pGes~~V~~~l~ 613 (656)
+|+++++|+|+.+ |-++|-.=-...... .-|.. ....-.+ .|.|||+.+|+|+.+
T Consensus 28 ~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~-~l~pGes~~vtf~~~ 100 (125)
T 3fsa_A 28 QFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTK-LIGSGEKDSVTFDVS 100 (125)
T ss_dssp EEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECC-CBCTTCEEEEEEEGG
T ss_pred EEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccc-eeCCCcEEEEEEeCc
Confidence 6889999999998 888887611111100 00110 1111122 279999999999987
No 25
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.35 E-value=4.7 Score=35.10 Aligned_cols=58 Identities=10% Similarity=0.117 Sum_probs=38.7
Q ss_pred cEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCchhhhhcccccccCCCCeEEEEEEecCCCCceEEeCC
Q 006224 556 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKF 624 (656)
Q Consensus 556 ~~~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~~ 624 (656)
+-+.++.|+|+|+.+++--.+. ..|- .-.|. +-.|+|||+.+|++++.+ .....|+..
T Consensus 42 ~~~~~~~l~N~g~~~~~f~~~~--~~~F-~i~P~-------~g~L~pg~~~~i~V~F~P-~~~g~~~~~ 99 (122)
T 2ys4_A 42 STQKILLVRNIGNKNAVFHIKT--CRPF-SIEPA-------IGTLNVGESMQLEVEFEP-QSVGDHSGR 99 (122)
T ss_dssp CEEEEEEEECCSSSCEEEEEEC--CTTE-EEESS-------EEEECTTCEEEEEEEECC-SSSBCCCCB
T ss_pred eEEEEEEEEECCCCCEEEEEec--CCCe-EEECC-------cCEECCCCEEEEEEEEEc-CCCccEEEE
Confidence 4678999999999886643221 1110 12333 346899999999999999 665555433
No 26
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=75.67 E-value=4.4 Score=42.43 Aligned_cols=54 Identities=17% Similarity=0.297 Sum_probs=34.5
Q ss_pred cEEEEEEEEeCCCCCcceEEEE--E-------EeCCCCC--CCchhhhh---cc--cccccCCCCeEEEEEEecC
Q 006224 556 SLGLHVDIKNTGDMAGTHTLLV--F-------AKPPAGN--WSPNKQLI---GF--KKVHVTAGALQSVRLDIHV 614 (656)
Q Consensus 556 ~~~v~v~VtNtG~~~G~evvQl--Y-------~~~~~~~--~~P~k~L~---gF--~kv~L~pGes~~V~~~l~~ 614 (656)
+++++++|||.|+-+ ||| | +.+.... ....++|. |- .. -|+|||+++|++++.-
T Consensus 299 ~l~~~~~VtN~g~~p----vrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~s~~-pI~PGETrt~~V~a~d 368 (419)
T 3rfr_A 299 ELTINVKVKNGTSQP----VRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLSNDD-VIAPGESKEIVVKIQD 368 (419)
T ss_dssp EEEEEEEEECCSSSC----BEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCCCCC-CBCTTCEEEEEEEEEC
T ss_pred EEEEEEEEecCCCCc----eEEeeEEEccEEEeCcccccCCCCCchhhhhccCCCCCC-CcCCCcceEEEEEeeh
Confidence 799999999999876 565 2 2221111 11223332 22 23 5999999999999874
No 27
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=74.23 E-value=4.8 Score=36.21 Aligned_cols=55 Identities=15% Similarity=0.027 Sum_probs=33.4
Q ss_pred cEEEEEEEEeCCCCCcceEEEEEEeCCC-CCCCchhhhhcc-cccccCCCCeEEEEEEecC
Q 006224 556 SLGLHVDIKNTGDMAGTHTLLVFAKPPA-GNWSPNKQLIGF-KKVHVTAGALQSVRLDIHV 614 (656)
Q Consensus 556 ~~~v~v~VtNtG~~~G~evvQlY~~~~~-~~~~P~k~L~gF-~kv~L~pGes~~V~~~l~~ 614 (656)
..+-+++|+|||.+.- +.-+..+. ........|.=. .+-.|.|||+.+|++++..
T Consensus 44 ~~~~~l~I~Ntg~vpa----~F~f~~~~~~~~~~~~wl~v~P~~G~L~Pge~~~I~v~~~v 100 (140)
T 3qbt_B 44 LQKEKFQISNNGQVPC----HFSFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYV 100 (140)
T ss_dssp CEEEEEEEEECSSSCE----EEEEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECB
T ss_pred eeeeEEEEEcCCccce----EEEEecCCCchhhhhHhhhcCCcccccCCCCeeEEEEEEEE
Confidence 3577999999999984 33333321 110000011111 2346999999999999986
No 28
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=72.80 E-value=3.4 Score=38.51 Aligned_cols=24 Identities=17% Similarity=0.104 Sum_probs=17.6
Q ss_pred ccCCCCeEEEEEEec---CCCCceEEeC
Q 006224 599 HVTAGALQSVRLDIH---VCKHLSVVDK 623 (656)
Q Consensus 599 ~L~pGes~~V~~~l~---~~~~ls~~d~ 623 (656)
.|.|||+.+|+|+++ + -.+.||..
T Consensus 125 ~l~pGet~svtf~~~~lkp-G~Y~f~Ct 151 (167)
T 3ay2_A 125 LIGGGEESSLTLDPAKLAD-GDYKFACT 151 (167)
T ss_dssp CBCTTCEEEEEECGGGGTT-SCEEEECC
T ss_pred eeCCCCEEEEEEecCCCCC-cEEEEEcC
Confidence 479999999999975 3 34555543
No 29
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=65.14 E-value=11 Score=33.44 Aligned_cols=25 Identities=16% Similarity=0.247 Sum_probs=18.1
Q ss_pred ccCCCCeEEEEEEec---CCCCceEEeC
Q 006224 599 HVTAGALQSVRLDIH---VCKHLSVVDK 623 (656)
Q Consensus 599 ~L~pGes~~V~~~l~---~~~~ls~~d~ 623 (656)
.|.||||.+|+|+.+ +..+..||-.
T Consensus 86 ~l~pGet~svtf~~~~l~~G~~Y~f~C~ 113 (129)
T 2ccw_A 86 VIGGGESDSVTFDVSKIAAGENYAYFCS 113 (129)
T ss_dssp CBCTTCEEEEEEEGGGSCTTCCEEEECC
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeC
Confidence 479999999999986 2123666654
No 30
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=64.91 E-value=7.1 Score=37.49 Aligned_cols=52 Identities=17% Similarity=0.103 Sum_probs=31.4
Q ss_pred EEEEEEEEeCCCCCcceEEEEEEeCCCCCCCc-----hhhhhcc-------cccccCCCCeEEEEEEe
Q 006224 557 LGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSP-----NKQLIGF-------KKVHVTAGALQSVRLDI 612 (656)
Q Consensus 557 ~~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P-----~k~L~gF-------~kv~L~pGes~~V~~~l 612 (656)
-+++++|+|||+++ ||+=-...--...| ...=.|| .-|..+|||+++|++.=
T Consensus 125 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 188 (225)
T 3qga_A 125 EITELKVTNKGPKS----LHVGSHFHFFEANRALEFDREKAYGKRLDIPSGNTLRIGAGETKTVHLIP 188 (225)
T ss_dssp CCEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred ceEEEEEEECCCCc----eeeccccchhhcCchhhccHHHhCCcccccCCCCeEeeCCCCeeEEEEEE
Confidence 36899999999999 88732221111111 1111222 34667999999998754
No 31
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=64.35 E-value=4.7 Score=39.48 Aligned_cols=46 Identities=13% Similarity=0.141 Sum_probs=32.2
Q ss_pred EEeCCCCCcceEEEEEEeCCCCC--CCc--------hhhhhcccccccCCCCeEEEEEEecC
Q 006224 563 IKNTGDMAGTHTLLVFAKPPAGN--WSP--------NKQLIGFKKVHVTAGALQSVRLDIHV 614 (656)
Q Consensus 563 VtNtG~~~G~evvQlY~~~~~~~--~~P--------~k~L~gF~kv~L~pGes~~V~~~l~~ 614 (656)
+-|-|. |.=+|+||.+.+... ..| .+.+..+.+|.|.||||- +|.+
T Consensus 131 iinRgG--G~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESi----Tl~P 186 (246)
T 3kmh_A 131 IINRGG--GNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESI----CLPP 186 (246)
T ss_dssp EEEEEE--SCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEE----EECT
T ss_pred EEecCC--CeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeE----ecCC
Confidence 455554 567788888876632 122 457888999999999995 6676
No 32
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=64.32 E-value=11 Score=33.20 Aligned_cols=25 Identities=20% Similarity=0.271 Sum_probs=18.6
Q ss_pred ccCCCCeEEEEEEec---CCCCceEEeC
Q 006224 599 HVTAGALQSVRLDIH---VCKHLSVVDK 623 (656)
Q Consensus 599 ~L~pGes~~V~~~l~---~~~~ls~~d~ 623 (656)
.|.||||.+|+|+.+ +..+..||-.
T Consensus 86 ~l~pGet~svtf~~~~l~~G~~Y~f~C~ 113 (128)
T 1nwp_A 86 VIGAGEKDSVTFDVSKLAAGEKYGFFCS 113 (128)
T ss_dssp CBCTTCEEEEEEEGGGSCTTSCEEEECC
T ss_pred eeCCCCEEEEEEeccccCCCceEEEEEC
Confidence 489999999999986 3124677754
No 33
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=61.60 E-value=7.8 Score=37.51 Aligned_cols=51 Identities=22% Similarity=0.194 Sum_probs=31.5
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCCCc-----hhhhhcc-------cccccCCCCeEEEEEEe
Q 006224 558 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSP-----NKQLIGF-------KKVHVTAGALQSVRLDI 612 (656)
Q Consensus 558 ~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P-----~k~L~gF-------~kv~L~pGes~~V~~~l 612 (656)
+++++|+|||+|+ ||+=-...--...| ...=.|| .-|..+||++++|++.=
T Consensus 126 ~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTAVRFEPG~~r~V~LV~ 188 (238)
T 1e9y_A 126 AVSVKVKNVGDRP----VQIGSHFHFFEVNRCLDFDREKTFGKRLDIAAGTAVRFEPGEEKSVELID 188 (238)
T ss_dssp CCEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSSTTCEEEECTTCEEEEEEEE
T ss_pred eEEEEEEeCCCCc----eEeccccchHhcCccccccHHHhCCcccCcCCCCeEeeCCCCeeEEEEEE
Confidence 5789999999999 88732222111111 1112222 34667999999999864
No 34
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=60.01 E-value=10 Score=32.78 Aligned_cols=43 Identities=14% Similarity=0.125 Sum_probs=23.0
Q ss_pred ccCCCCeEEEEEEecCCCCceEEeCC---------------CCE--Ee-cCeEEEEEEecC
Q 006224 599 HVTAGALQSVRLDIHVCKHLSVVDKF---------------GIR--RI-PMGEHSLHIGDL 641 (656)
Q Consensus 599 ~L~pGes~~V~~~l~~~~~ls~~d~~---------------~~~--~~-~~G~y~i~vG~s 641 (656)
.+++||+-+|+++-...-.|.+++.+ +.| ++ +.|.|+|.|...
T Consensus 35 ~a~aGQ~l~V~ls~~~~~~f~I~~P~~~~~~~l~~g~~~~~~~~~g~LP~sG~Y~i~V~~~ 95 (114)
T 4dzg_A 35 VAXAGQTMTVXIGGSSNANFNVFAPGAQPGQAEAIGRNDGDGQWQGALPASGXYLIQVYQM 95 (114)
T ss_dssp CC-CCCEEEC-CEESTTCEEEEECTTCCTTTSCCSEECCTTSCCEEECSSCC-CEEEEECC
T ss_pred EecCCCEEEEEeCCCCcEEEEEECCCCCcccceeccccCCcceEEEEecCCCcEEEEEEec
Confidence 34677776666633321124444332 268 45 479999999975
No 35
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=57.72 E-value=14 Score=32.58 Aligned_cols=25 Identities=16% Similarity=0.236 Sum_probs=18.3
Q ss_pred ccCCCCeEEEEEEec---CCCCceEEeC
Q 006224 599 HVTAGALQSVRLDIH---VCKHLSVVDK 623 (656)
Q Consensus 599 ~L~pGes~~V~~~l~---~~~~ls~~d~ 623 (656)
.|.||||.+|+|+++ +..+..||..
T Consensus 85 ~l~pGes~~vtf~~~~l~~G~~Y~f~C~ 112 (128)
T 2iaa_C 85 VIGGGETDSVTFDVSKLKEGEDYAFFCS 112 (128)
T ss_dssp CBCTTCEEEEEEESSCCCTTCCEEEECC
T ss_pred eeCCCCEEEEEEeccccCCCceEEEEEC
Confidence 479999999999985 3114666654
No 36
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=55.81 E-value=29 Score=30.55 Aligned_cols=18 Identities=6% Similarity=-0.021 Sum_probs=14.5
Q ss_pred ccccCCCCeEEEEEEecC
Q 006224 597 KVHVTAGALQSVRLDIHV 614 (656)
Q Consensus 597 kv~L~pGes~~V~~~l~~ 614 (656)
.+.|.|||+.+|+|+.+.
T Consensus 98 t~~l~pGet~~v~f~~~~ 115 (139)
T 2aan_A 98 SPLANGNETVEVTFTAPA 115 (139)
T ss_dssp CCCBCTTCEEEEEEECCS
T ss_pred ccccCCCCEEEEEEECCC
Confidence 445899999999998753
No 37
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=55.71 E-value=8 Score=45.86 Aligned_cols=58 Identities=17% Similarity=0.283 Sum_probs=37.9
Q ss_pred cEEEEEEEEeCCCCCcceEEEEEEeC--CCCC---CCchhhhhcc--cccccCCCCeEEEEEEecC
Q 006224 556 SLGLHVDIKNTGDMAGTHTLLVFAKP--PAGN---WSPNKQLIGF--KKVHVTAGALQSVRLDIHV 614 (656)
Q Consensus 556 ~~~v~v~VtNtG~~~G~evvQlY~~~--~~~~---~~P~k~L~gF--~kv~L~pGes~~V~~~l~~ 614 (656)
+++++++|||+|+.+...+.++-+.. |... ..|. .|.-+ +++.|+|||+++++++++.
T Consensus 500 ~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~-~l~~~~~~~vtv~ag~~~~~~vt~~~ 564 (926)
T 1xf1_A 500 KFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPK-VLYETSWQKITIPANSSKQVTVPIDA 564 (926)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEE-EEEECCCEEEEECTTEEEEEEEEEEC
T ss_pred cEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccc-eeEeccCCeEEECCCCEEEEEEEEEc
Confidence 58899999999987654444433322 2221 2343 33322 4567999999999999986
No 38
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=50.51 E-value=18 Score=34.82 Aligned_cols=50 Identities=12% Similarity=0.230 Sum_probs=34.5
Q ss_pred cEEEEEEEEeCCCCCcceEEEEEEeCCCCC-CCchhhhhcccccccCCCCeEEEEEEecC
Q 006224 556 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHV 614 (656)
Q Consensus 556 ~~~v~v~VtNtG~~~G~evvQlY~~~~~~~-~~P~k~L~gF~kv~L~pGes~~V~~~l~~ 614 (656)
..+.+++++|+|+.. .+++--..... ..|. +.|-.|+|||+.+|++++++
T Consensus 135 ~~~~~f~i~N~G~~p----L~I~~v~~scgct~~~-----~~~~~i~PGe~~~i~v~~~~ 185 (220)
T 2qsv_A 135 TTKAAIEIRNVGAGP----LRLHSVTTRNPALTAV-----PDRTEIKPGGSTLLRIAVDP 185 (220)
T ss_dssp CEEEEEEEEECSSSC----EEEEEEEECSTTEEEE-----ESCSEECTTCEEEEEEEECH
T ss_pred eEEEEEEEEECCCCC----EEEEEEEeCCCCEeee-----cCCccCCCCCEEEEEEEEec
Confidence 578899999999986 33321111111 2222 56777999999999999997
No 39
>2lv4_A Putative outer membrane or exported protein; antivirulence, adhesion, protein binding; NMR {Salmonella enterica subsp}
Probab=47.95 E-value=35 Score=29.80 Aligned_cols=65 Identities=11% Similarity=0.139 Sum_probs=43.3
Q ss_pred chhhhhcccccccCCCCeEEEEEEecCCCC------------ceEEeCCCCE-------EecCeEEEE---EEecCCcee
Q 006224 588 PNKQLIGFKKVHVTAGALQSVRLDIHVCKH------------LSVVDKFGIR-------RIPMGEHSL---HIGDLKHSI 645 (656)
Q Consensus 588 P~k~L~gF~kv~L~pGes~~V~~~l~~~~~------------ls~~d~~~~~-------~~~~G~y~i---~vG~ss~~~ 645 (656)
|--.+..-.|-.|.||||.+|++-+.- -+ ...++-.|.| ..-||+|.= +-|.|+..|
T Consensus 48 pDLtvisiDk~vL~PGESA~it~IvKD-id~nPIn~v~i~~~~~~~~~~g~Wd~g~~Kkg~~PGeY~q~iTY~G~s~~~i 126 (146)
T 2lv4_A 48 PDLTVMSIDKSVLSPGESATITTIVKD-IDGNPVNEVHINKTVARENLKGLWDYGPLKKENVPGKYTQVITYRGHSNERI 126 (146)
T ss_dssp GGGCEEECCCCCBCTTCEEEEEEECBB-TTSCBCCCCCCBCCEECSCSSSEEEECCCEECSSSSEEEEEEEEETTCCCEE
T ss_pred CCcEEEecCccccCCCcceEEEEEEEe-CCCCcccceeeeeeeeccccccceeecceecCCCCcceEEEEEEcCCCCceE
Confidence 333455667888999999999987753 11 1112223445 346899975 457888888
Q ss_pred EEEEEecc
Q 006224 646 SLQANLEG 653 (656)
Q Consensus 646 ~~~~~~~~ 653 (656)
.++.+--|
T Consensus 127 ~l~yky~g 134 (146)
T 2lv4_A 127 DISFKYAM 134 (146)
T ss_dssp EEEEECST
T ss_pred EEEeeeee
Confidence 88887655
No 40
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=41.36 E-value=49 Score=31.70 Aligned_cols=48 Identities=17% Similarity=0.198 Sum_probs=32.0
Q ss_pred cEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCchhhhhcccc-----cccCCCCeEEEEEEecCCCCc
Q 006224 556 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKK-----VHVTAGALQSVRLDIHVCKHL 618 (656)
Q Consensus 556 ~~~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P~k~L~gF~k-----v~L~pGes~~V~~~l~~~~~l 618 (656)
..+.+++++|+|+.+=. +.++ +-| .|-+ ..|+|||+.+++|+++. +.+
T Consensus 20 ~~~~~~~i~N~g~~pl~-i~~~--~~p-----------~~~~~~~~~~~I~PG~~g~I~vt~~~-~~~ 72 (220)
T 2qsv_A 20 EGVVRLVVNNTDESDLQ-VAVV--SLP-----------SFVSLDDRAFRLQAREPRELNLSLAV-PRN 72 (220)
T ss_dssp CCEEEEEEEECSSSCEE-EEEE--ECC-----------TTEECSCCEEEECSSSCEEEEEEECC-CTT
T ss_pred cceEEEEEEeCCCCceE-EEec--cCC-----------CceEeeeCcceeCCCCceEEEEEEcc-hhc
Confidence 35679999999997722 1111 111 1222 45899999999999997 444
No 41
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=38.88 E-value=56 Score=29.55 Aligned_cols=54 Identities=15% Similarity=0.085 Sum_probs=26.7
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCCCchh-hhhcccc--cccCCCC--eEEEEEEe
Q 006224 558 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNK-QLIGFKK--VHVTAGA--LQSVRLDI 612 (656)
Q Consensus 558 ~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P~k-~L~gF~k--v~L~pGe--s~~V~~~l 612 (656)
+|+++++|.|+...-.++..=...+.. .-|.. ....... ..|.||| +.+++|++
T Consensus 70 ~V~~~~tN~~~~~~H~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~ 128 (154)
T 2cal_A 70 TVDVTFINTNKGFGHSFDITKKGPPYA-VMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP 128 (154)
T ss_dssp EEEEEEEECCTTCCCCCEEESCCSCCC-SSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC
T ss_pred EEEEEEEcCCCCeeeEEEEeecCcchh-ccccccccccccccccccCCCCceEEEEEEEE
Confidence 688999998653344444331111111 00110 0111111 1579999 77777776
No 42
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=38.65 E-value=61 Score=33.76 Aligned_cols=55 Identities=15% Similarity=0.035 Sum_probs=34.7
Q ss_pred cEEEEEEEEeCCCCCcceEEEEEEeCC-CCCCCchhhhhcc-cccccCCCCeEEEEEEecC
Q 006224 556 SLGLHVDIKNTGDMAGTHTLLVFAKPP-AGNWSPNKQLIGF-KKVHVTAGALQSVRLDIHV 614 (656)
Q Consensus 556 ~~~v~v~VtNtG~~~G~evvQlY~~~~-~~~~~P~k~L~gF-~kv~L~pGes~~V~~~l~~ 614 (656)
..+-+++|+|||.+. ++.-+..+ .....+...|.=. .+-.|.|||+.+|++++..
T Consensus 47 ~~~~~l~i~N~g~~p----a~f~f~~~~~~~~~~~~wl~v~p~~g~l~Pge~~~i~l~~~v 103 (366)
T 3qis_A 47 LQKEKFQISNNGQVP----CHFSFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYV 103 (366)
T ss_dssp CEEEEEEEEECSSSC----EEEEEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECB
T ss_pred eEEEEEEEEecCCce----EEEEEEeCCCCCCCCCCcEEEeCCccEECCCCEEEEEEEEEE
Confidence 467899999999998 44433332 2222111112111 2346999999999999987
No 43
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=36.94 E-value=29 Score=40.57 Aligned_cols=51 Identities=18% Similarity=0.198 Sum_probs=31.7
Q ss_pred EEEEEEEEeCCCCCcceEEEEEEeCCCCCCCch---hhhhcc---------cccccCCCCeEEEEEE
Q 006224 557 LGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPN---KQLIGF---------KKVHVTAGALQSVRLD 611 (656)
Q Consensus 557 ~~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P~---k~L~gF---------~kv~L~pGes~~V~~~ 611 (656)
-+++++|+|||+|+ +|+=-+..--...|. -+.++| .-|+.+|||+|+|++.
T Consensus 151 ~~~~~~v~~~~~r~----~~v~sh~hf~e~n~~l~fdr~~~~g~rl~~~~g~~~rf~pg~~~~v~l~ 213 (840)
T 4gy7_A 151 KAVILKVTSKGDRP----IQVGSHYHFIEVNPYLTFDRRKAYGMRLNIAAGTAVRFEPGDCKSVTLV 213 (840)
T ss_dssp EEEEEEEEECCSSC----EEEETTSCGGGSCTTEEBCHHHHTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred ceEEEEEEeCCCCc----eEeccccchhhcCcccccchhhhccccccccCCCceeeCCCCeeEEEEE
Confidence 47999999999999 887322221111121 012222 3466799999999985
No 44
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=36.76 E-value=62 Score=26.52 Aligned_cols=41 Identities=24% Similarity=0.272 Sum_probs=24.6
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCCCchhhhhcccccccCCCCeEEEEEEecC
Q 006224 558 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHV 614 (656)
Q Consensus 558 ~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~ 614 (656)
+|++.++|.|... .-+ .+.. + ..+..|.||++.+++|+.+.
T Consensus 37 tV~~~~~n~d~~~--H~~--~~~~----------~--~~~~~~~pg~~~~~~~t~~~ 77 (100)
T 4hci_A 37 STTLLLKNKGKSE--HTF--TIKK----------L--GIDVVVESGKEKNITVKPKS 77 (100)
T ss_dssp CEEEEEEECSSSC--EEE--EEGG----------G--TEEEEECTTCEEEEEECCCS
T ss_pred EEEEEEEcCCCce--EEE--EEec----------C--CcceeecCCcceeEEEeccc
Confidence 4677778988654 111 1111 1 12345899999988887653
No 45
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=36.00 E-value=38 Score=28.42 Aligned_cols=41 Identities=12% Similarity=0.281 Sum_probs=26.2
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCCCchhhhhcccccccCCCCeEEEEEEecC
Q 006224 558 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHV 614 (656)
Q Consensus 558 ~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~ 614 (656)
+|++.++|.+.. -.- +.+. .+ |+ +..+.|||+.+++|+.+.
T Consensus 47 ~V~~~~~n~d~~--~H~--~~i~----------~~-~~-~~~i~pG~~~~~~f~~~~ 87 (112)
T 1iby_A 47 AVKVVVENKSPI--SEG--FSID----------AF-GV-QEVIKAGETKTISFTADK 87 (112)
T ss_dssp EEEEEEEECSSS--CEE--EEEG----------GG-TE-EEEECTTCEEEEEEECCS
T ss_pred EEEEEEEECCCC--eEE--EEEc----------CC-Cc-eeEeCCCCEEEEEEECCC
Confidence 688888999864 111 1111 11 22 567999999999998653
No 46
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=33.62 E-value=84 Score=30.23 Aligned_cols=52 Identities=19% Similarity=0.121 Sum_probs=34.9
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCC---CCchhhhhcccc-cccCCCCeEEEEEEecC
Q 006224 558 GLHVDIKNTGDMAGTHTLLVFAKPPAGN---WSPNKQLIGFKK-VHVTAGALQSVRLDIHV 614 (656)
Q Consensus 558 ~v~v~VtNtG~~~G~evvQlY~~~~~~~---~~P~k~L~gF~k-v~L~pGes~~V~~~l~~ 614 (656)
.++++|+|+|+.. -.||..+.+.... ..|..- === ..|+||+.+.|+|....
T Consensus 29 ~~sl~l~N~~~~p--~LvQswv~~~~~~~~~~~pFiv---tPPl~Rl~p~~~q~lRI~~~~ 84 (218)
T 4ay0_A 29 GVMVSVKNTQDYP--VLIQSRIYDENKEKESEDPFVV---TPPLFRLDAKQQNSLRIAQAG 84 (218)
T ss_dssp CEEEEEECCSSSC--EEEEEEEECTTSCCCSSCSEEE---ESSEEEECTTCEEEEEEEECS
T ss_pred EEEEEEEcCCCCC--EEEEEEEecCCCCccccCCEEE---CCCeEEeCCCCceEEEEEecC
Confidence 5789999999874 8999999764432 112100 001 24799999999997654
No 47
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=31.51 E-value=71 Score=30.02 Aligned_cols=53 Identities=23% Similarity=0.275 Sum_probs=34.4
Q ss_pred cHHHHHHHhhcCCEEEEEEeCCCccccccCCCCCccCChhHHHHHHHHHH-----hcCCCEEEEEecCc
Q 006224 354 LIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK-----ASRGPVVLVLMCGG 417 (656)
Q Consensus 354 ~~~~a~~~a~~aD~vIv~~G~~~~~~~Eg~Dr~~l~Lp~~Q~~Li~~v~~-----~~~kpvVvVl~~g~ 417 (656)
.+.+..+..++||.+|++.=+. +...|+.-+.+|+.+.. -.+||+.++..+|+
T Consensus 63 ~~~~~~~~i~~AD~iVi~tP~Y-----------~~s~p~~LK~~iD~~~~~~~~~l~gK~v~~v~tsgg 120 (199)
T 4hs4_A 63 PVLTMAQQIATADAVVIVTPEY-----------NYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTASPG 120 (199)
T ss_dssp HHHHHHHHHHHSSEEEEEECCB-----------TTBCCHHHHHHHHHHTTSSSCTTTTCEEEEEEECSS
T ss_pred HHHHHHHHHHhCCEEEEEcCcc-----------CCCcCHHHHHHHHHhcccCCcccCCCEEEEEEeCCC
Confidence 4566777889999999976222 34678888888888753 13455555444433
No 48
>4g9s_B Inhibitor of G-type lysozyme, goose-type lysozyme; hydrolase inhibitor, hydrolase-hydrolase inhibitor; HET: FLC; 0.95A {Escherichia coli} PDB: 4dy3_A* 4dxz_A* 4dy5_A
Probab=31.38 E-value=77 Score=26.85 Aligned_cols=25 Identities=12% Similarity=0.325 Sum_probs=15.8
Q ss_pred Eec-CeEEEEEEec------C--CceeEEEEEec
Q 006224 628 RIP-MGEHSLHIGD------L--KHSISLQANLE 652 (656)
Q Consensus 628 ~~~-~G~y~i~vG~------s--s~~~~~~~~~~ 652 (656)
+++ .|+|+|.|.- . ..+.+|+++||
T Consensus 78 ~LP~sG~Y~I~V~~~r~~ar~~~~~~Y~L~v~i~ 111 (111)
T 4g9s_B 78 SLPASGKYELRVLQTRNDARKNKTKKYNVDIQIK 111 (111)
T ss_dssp ECSSSEEEEEEEECCHHHHHTTCEEEEEEEEEEC
T ss_pred EecCCccEEEEEEeccchhccCCCcCEEEEEEEC
Confidence 454 7999999952 2 23556666554
No 49
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=31.24 E-value=1.2e+02 Score=29.96 Aligned_cols=54 Identities=11% Similarity=0.102 Sum_probs=36.0
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCCCchhh---hhccccc-ccCCCCeEEEEEEec
Q 006224 558 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQ---LIGFKKV-HVTAGALQSVRLDIH 613 (656)
Q Consensus 558 ~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P~k~---L~gF~kv-~L~pGes~~V~~~l~ 613 (656)
.++++|+|+|+. --.||..+.+......|.+. +.--=-+ .|+||+++.|+|...
T Consensus 45 ~~sl~l~N~~~~--P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~pg~~q~lRI~~~ 102 (257)
T 3q48_A 45 EVTLRVSNTSGT--PVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRIAYL 102 (257)
T ss_dssp EEEEEEEECSSS--CEEEEEEEESSCCSSCGGGGCCSEEEESSEEEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCC--eEEEEEEEEcCCCccCcccccCCEEEcCCEEEECCCCceEEEEEEC
Confidence 589999999987 58999999864432222211 1111222 489999999999654
No 50
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=30.79 E-value=19 Score=37.36 Aligned_cols=56 Identities=16% Similarity=0.221 Sum_probs=32.0
Q ss_pred HHhhcCCEEEEEEeCCCccccccCCCCCccCChhHH----HHHHHHHHhcCCCEEEEEecCcceec
Q 006224 360 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQ----ELVSRVAKASRGPVVLVLMCGGPVDV 421 (656)
Q Consensus 360 ~~a~~aD~vIv~~G~~~~~~~Eg~Dr~~l~Lp~~Q~----~Li~~v~~~~~kpvVvVl~~g~P~~l 421 (656)
+..+.||+||++.|... .+|.+|.+| =.... ++.+++.+...+.++|++ .+||++.
T Consensus 96 ~a~~~advVvi~aG~pr---kpGmtR~DL--l~~Na~I~~~~~~~i~~~a~~~~~vlv-vsNPvd~ 155 (345)
T 4h7p_A 96 VAFDGVAIAIMCGAFPR---KAGMERKDL--LEMNARIFKEQGEAIAAVAASDCRVVV-VGNPANT 155 (345)
T ss_dssp HHTTTCSEEEECCCCCC---CTTCCHHHH--HHHHHHHHHHHHHHHHHHSCTTCEEEE-CSSSHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCCHHHH--HHHhHHHHHHHHHHHHhhccCceEEEE-eCCCcch
Confidence 45789999999887543 455566544 12222 344455543333444443 4699876
No 51
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=28.95 E-value=16 Score=37.11 Aligned_cols=55 Identities=15% Similarity=0.347 Sum_probs=33.5
Q ss_pred HhhcCCEEEEEEeCCCccccccCCCCCccCChhH----HHHHHHHHHhcCCCEEEEEecCcceecc
Q 006224 361 AARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ----QELVSRVAKASRGPVVLVLMCGGPVDVS 422 (656)
Q Consensus 361 ~a~~aD~vIv~~G~~~~~~~Eg~Dr~~l~Lp~~Q----~~Li~~v~~~~~kpvVvVl~~g~P~~l~ 422 (656)
..+.||+||+..|... ..|.+|.+|- ..- .++++++++.++ +.|+++. .||++..
T Consensus 66 ~~~~aDvVvitAG~pr---kpGmtR~dLl--~~Na~I~~~i~~~i~~~~p-~aivlvv-sNPvd~~ 124 (294)
T 2x0j_A 66 LLKGSEIIVVTAGLAR---KPGMTRLDLA--HKNAGIIKDIAKKIVENAP-ESKILVV-TNPMDVM 124 (294)
T ss_dssp GGTTCSEEEECCCCCC---CSSSCHHHHH--HHHHHHHHHHHHHHHTTST-TCEEEEC-SSSHHHH
T ss_pred HhCCCCEEEEecCCCC---CCCCchHHHH--HHHHHHHHHHHHHHHhcCC-ceEEEEe-cCcchhh
Confidence 4679999999988653 4455665541 111 345566666544 4454444 5999863
No 52
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=28.22 E-value=92 Score=28.98 Aligned_cols=55 Identities=11% Similarity=0.073 Sum_probs=38.3
Q ss_pred ccHHHHHHHhhcCCEEEEEEeCCCccccccCCCCCccCChhHHHHHHHHHH---------------hcCCCEEEEEecCc
Q 006224 353 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK---------------ASRGPVVLVLMCGG 417 (656)
Q Consensus 353 ~~~~~a~~~a~~aD~vIv~~G~~~~~~~Eg~Dr~~l~Lp~~Q~~Li~~v~~---------------~~~kpvVvVl~~g~ 417 (656)
.++.+..+...+||.+|++.=.. ...+|+.=..+|+.+.. -.+|+++++..+|+
T Consensus 62 ~~~~~~~~~l~~AD~iV~~~P~y-----------~~~~pa~LK~~iD~v~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~ 130 (196)
T 3lcm_A 62 AEMEKYRDLVTWADHLIFIFPIW-----------WSGMPAILKGFIDRVFVADFAYSYKKVGLEGHLQGKSAWIITTHNT 130 (196)
T ss_dssp GGGHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHSCBTTTEEECSSSEEESCTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEECchh-----------hccccHHHHHHHHHHccCCcceecCCCCcccCCCCCEEEEEEcCCC
Confidence 34667778889999999876221 35678877888888742 13567777777777
Q ss_pred c
Q 006224 418 P 418 (656)
Q Consensus 418 P 418 (656)
|
T Consensus 131 ~ 131 (196)
T 3lcm_A 131 P 131 (196)
T ss_dssp C
T ss_pred c
Confidence 7
No 53
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=26.77 E-value=43 Score=34.45 Aligned_cols=57 Identities=19% Similarity=0.330 Sum_probs=32.9
Q ss_pred HHHhhcCCEEEEEEeCCCccccccCCCCCccCChh----HHHHHHHHHHhcCCCEEEEEecCcceec
Q 006224 359 EVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGR----QQELVSRVAKASRGPVVLVLMCGGPVDV 421 (656)
Q Consensus 359 ~~~a~~aD~vIv~~G~~~~~~~Eg~Dr~~l~Lp~~----Q~~Li~~v~~~~~kpvVvVl~~g~P~~l 421 (656)
.+..++||+||++.|... .+|.+|.+| -.. -.++++++.+...+-+++++. +||+++
T Consensus 74 ~~~~~daDvVvitAg~pr---kpG~tR~dl--l~~N~~i~~~i~~~i~~~~~~~~~vivv-sNPvd~ 134 (333)
T 5mdh_A 74 EIAFKDLDVAILVGSMPR---RDGMERKDL--LKANVKIFKCQGAALDKYAKKSVKVIVV-GNPANT 134 (333)
T ss_dssp HHHTTTCSEEEECCSCCC---CTTCCTTTT--HHHHHHHHHHHHHHHHHHSCTTCEEEEC-SSSHHH
T ss_pred HHHhCCCCEEEEeCCCCC---CCCCCHHHH--HHHHHHHHHHHHHHHHHhCCCCeEEEEc-CCchHH
Confidence 345689999999877542 345566553 121 134566666554332334433 599987
No 54
>1g43_A Scaffolding protein; beta-sandwich, structural protein; 2.20A {Clostridium cellulolyticum} SCOP: b.2.2.2
Probab=26.04 E-value=24 Score=32.37 Aligned_cols=34 Identities=12% Similarity=0.108 Sum_probs=28.1
Q ss_pred hcccc--cccCCCCeEEEEEEecCCCCceEEeCCCCE
Q 006224 593 IGFKK--VHVTAGALQSVRLDIHVCKHLSVVDKFGIR 627 (656)
Q Consensus 593 ~gF~k--v~L~pGes~~V~~~l~~~~~ls~~d~~~~~ 627 (656)
.+|.. ..|.||++.+|.|.|.. .+.+-||....|
T Consensus 97 I~F~~~ag~l~pg~s~eiq~ri~~-~dws~~dqsNDy 132 (160)
T 1g43_A 97 VALNSDAGSLPAGGSIEIQTRFAR-NDWSNFDQSNDW 132 (160)
T ss_dssp EEECTTSCEECTTCEEEEEEEEEE-TTCCCEEGGGCT
T ss_pred EEecCCcceECCCCcEEEEEEEec-CCCCcccccCCc
Confidence 46765 67999999999999997 788899986554
No 55
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=25.56 E-value=1.1e+02 Score=29.95 Aligned_cols=56 Identities=9% Similarity=0.043 Sum_probs=36.7
Q ss_pred cEEEEEEEEeCCCCCcceEEEEEEeCCCCC-CCchhhhhcc-cccccCCCCeEEEEEEecC
Q 006224 556 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGF-KKVHVTAGALQSVRLDIHV 614 (656)
Q Consensus 556 ~~~v~v~VtNtG~~~G~evvQlY~~~~~~~-~~P~k~L~gF-~kv~L~pGes~~V~~~l~~ 614 (656)
.+.+.++|-|..+..=+--|+|..++.... ..+. ..+ +++.|.||++++|.|.+.+
T Consensus 97 ~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~---~~~~~~v~v~a~~~~~v~f~i~p 154 (252)
T 3hrz_B 97 QVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKG---QRYRQQFPIKALSSRAVPFVIVP 154 (252)
T ss_dssp CEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSS---CCEEEEEEECTTEEEEEEEEEEE
T ss_pred EEEEEEEEEcccCceEEEEEEEEcCCceEeecCCC---CceEEEEEECCCCeEEEEEEEEe
Confidence 689999999998876554455544332211 1111 112 3467999999999999987
No 56
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=25.47 E-value=34 Score=35.20 Aligned_cols=57 Identities=21% Similarity=0.283 Sum_probs=28.3
Q ss_pred HHhhcCCEEEEEEeCCCccccccCCCCCccC-C-hhHHHHHHHHHHhcCCCEEEEEecCcceec
Q 006224 360 VAARQADATVLVMGLDQSIEAEFIDRAGLLL-P-GRQQELVSRVAKASRGPVVLVLMCGGPVDV 421 (656)
Q Consensus 360 ~~a~~aD~vIv~~G~~~~~~~Eg~Dr~~l~L-p-~~Q~~Li~~v~~~~~kpvVvVl~~g~P~~l 421 (656)
+..+.||+||++.|... .+|.+|.+|-- . +--.++++++.+.++ +.++++. +||+++
T Consensus 72 ~a~~~aDiVvi~ag~~~---kpG~tR~dL~~~N~~I~~~i~~~i~~~~p-~a~ilvv-tNPvdi 130 (326)
T 3vku_A 72 SDAKDADLVVITAGAPQ---KPGETRLDLVNKNLKILKSIVDPIVDSGF-NGIFLVA-ANPVDI 130 (326)
T ss_dssp GGGTTCSEEEECCCCC-------------------CHHHHHHHHHTTTC-CSEEEEC-SSSHHH
T ss_pred HHhcCCCEEEECCCCCC---CCCchHHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEc-cCchHH
Confidence 34689999999988542 34556655411 1 112456666665443 4554444 599987
No 57
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=24.57 E-value=21 Score=36.10 Aligned_cols=57 Identities=14% Similarity=0.284 Sum_probs=32.4
Q ss_pred HHhhcCCEEEEEEeCCCccccccCCCCCccCCh--hHHHHHHHHHHhcCCCEEEEEecCcceec
Q 006224 360 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPG--RQQELVSRVAKASRGPVVLVLMCGGPVDV 421 (656)
Q Consensus 360 ~~a~~aD~vIv~~G~~~~~~~Eg~Dr~~l~Lp~--~Q~~Li~~v~~~~~kpvVvVl~~g~P~~l 421 (656)
++.+.||++|++.|... .+|.+|.++-.-. --.++++++.+.+ +..++++. +||+++
T Consensus 65 ~a~~~aDiVViaag~~~---kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivv-sNPvd~ 123 (294)
T 1oju_A 65 SLLKGSEIIVVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVV-TNPMDV 123 (294)
T ss_dssp GGGTTCSEEEECCCCCC---CSSCCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEEC-SSSHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEe-CCcchH
Confidence 35679999999988643 3444554431100 1124455565543 34555544 599987
No 58
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6
Probab=24.51 E-value=1.3e+02 Score=27.03 Aligned_cols=38 Identities=8% Similarity=0.012 Sum_probs=25.2
Q ss_pred cHHHHHHHhhcCCEEEEEEeCCCccccccCCCCCccCChhHHHHHHHHH
Q 006224 354 LIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA 402 (656)
Q Consensus 354 ~~~~a~~~a~~aD~vIv~~G~~~~~~~Eg~Dr~~l~Lp~~Q~~Li~~v~ 402 (656)
++.+..+...+||.+|++.-.. ...+|+.=..+|+.+.
T Consensus 61 ~~~~~~~~l~~aD~ii~~~P~y-----------~~~~p~~lK~~iD~~~ 98 (184)
T 1rli_A 61 DYDSIIERILQCHILIFATPIY-----------WFGMSGTLKLFIDRWS 98 (184)
T ss_dssp CHHHHHHHHHTCSEEEEEEECB-----------TTBCCHHHHHHHHTHH
T ss_pred CHHHHHHHHHhCCEEEEEeCcc-----------ccCCcHHHHHHHHHhH
Confidence 4556667788999999876322 2356666667777653
No 59
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=24.50 E-value=89 Score=29.49 Aligned_cols=54 Identities=19% Similarity=0.175 Sum_probs=35.5
Q ss_pred HHHHHHHhhcCCEEEEEEeCCCccccccCCCCCccCChhHHHHHHHHHHh---------------cCCCEEEEEecCcce
Q 006224 355 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKA---------------SRGPVVLVLMCGGPV 419 (656)
Q Consensus 355 ~~~a~~~a~~aD~vIv~~G~~~~~~~Eg~Dr~~l~Lp~~Q~~Li~~v~~~---------------~~kpvVvVl~~g~P~ 419 (656)
+.+..+...+||.+|++.=.. +..+|+.-..+|+.+... .+|+++++..+|+|+
T Consensus 83 ~~~~~~~~~~aD~iv~~~P~y-----------~~~~p~~lK~~iD~~~~~~~~~~~~~~g~~g~l~gK~~~~i~t~g~~~ 151 (211)
T 3p0r_A 83 ADKYLNQFLEADKVVFGFPLW-----------NLTIPAVLHTYIDYLNRAGKTFKYTPEGPVGLIGDKKIALLNARGGVY 151 (211)
T ss_dssp HHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHCCBTTTEECCTTCCEESCTTCEEEEEEEESSCC
T ss_pred HHHHHHHHHhCCEEEEEcChh-----------cccCCHHHHHHHHHHhccCceeccCCCCCccCCCCCEEEEEEeCCCCC
Confidence 455667788999999876322 346777777888877421 245666666666664
No 60
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=24.15 E-value=45 Score=34.31 Aligned_cols=54 Identities=19% Similarity=0.142 Sum_probs=33.3
Q ss_pred hhcCCEEEEEEeCCCccccccCCCCCccCChhH----HHHHHHHHHhcCCCEEEEEecCcceecc
Q 006224 362 ARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ----QELVSRVAKASRGPVVLVLMCGGPVDVS 422 (656)
Q Consensus 362 a~~aD~vIv~~G~~~~~~~Eg~Dr~~l~Lp~~Q----~~Li~~v~~~~~kpvVvVl~~g~P~~l~ 422 (656)
.++||+||++.|... .+|.+|.++- ..- .++++++.+.+ +..++++. +||+++-
T Consensus 87 ~~daDiVIitaG~p~---kpG~tR~dll--~~N~~I~k~i~~~I~k~~-P~a~ilvv-tNPvdi~ 144 (330)
T 3ldh_A 87 SAGSKLVVITAGARQ---QEGESRLNLV--QRNVNIFKFIIPNIVKHS-PDCLKELH-PELGTDK 144 (330)
T ss_dssp CSSCSEEEECCSCCC---CSSCCTTGGG--HHHHHHHHHHHHHHHHHC-TTCEEEEC-SSSHHHH
T ss_pred hCCCCEEEEeCCCCC---CCCCCHHHHH--HhhHHHHHHHHHHHHhhC-CCceEEeC-CCccHHH
Confidence 679999999988653 4555665542 222 34556666554 34555444 5999873
No 61
>4b9f_A Cellulosomal-scaffolding protein A; sugar binding protein, cellulosome; 1.19A {Clostridium thermocellum atcc 27405} PDB: 1nbc_A
Probab=23.76 E-value=38 Score=30.76 Aligned_cols=35 Identities=14% Similarity=0.057 Sum_probs=29.3
Q ss_pred hcccccccCCCCeEEEEEEecCCCCceEEeCCCCEE
Q 006224 593 IGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRR 628 (656)
Q Consensus 593 ~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~~~~~~ 628 (656)
.+|.-..|.||++.+|.|.|.. .+.+.||....|-
T Consensus 94 I~Ft~g~l~pg~~~eiQ~ri~~-~~~s~~d~snDyS 128 (152)
T 4b9f_A 94 ISFTGGTLEPGAHVQIQGRFAK-NDWSNYTQSNDYS 128 (152)
T ss_dssp EEESSCEECTTCEEEEEEEEEE-TTCCCEESTTCTT
T ss_pred EEccCceEcCCCcEEEEEEEEC-CCCcceeEcCCcC
Confidence 4677777999999999999998 8899999876653
No 62
>3zqx_A Cellulose 1,4-beta-cellobiosidase; hydrolase, cellulose binding protein; 1.04A {Clostridium thermocellum} PDB: 2ylk_A
Probab=23.59 E-value=18 Score=32.70 Aligned_cols=35 Identities=23% Similarity=0.288 Sum_probs=28.1
Q ss_pred hcccccccCCC-CeEEEEEEecCCCCceEEeCCCCEE
Q 006224 593 IGFKKVHVTAG-ALQSVRLDIHVCKHLSVVDKFGIRR 628 (656)
Q Consensus 593 ~gF~kv~L~pG-es~~V~~~l~~~~~ls~~d~~~~~~ 628 (656)
.+|....|.|| ++.+|.|.|.. .+.+-||....|-
T Consensus 81 I~f~~g~l~pg~~s~eiQ~Ri~~-~dws~~dqsnDyS 116 (146)
T 3zqx_A 81 LEFKDVKLPAGGQTGEIQFVIRY-ADWSFHDQSNDYS 116 (146)
T ss_dssp EEECSCEECTTCBCCCEEEEEEE-TTCCCEEGGGCTT
T ss_pred EEeCCcEEcCCCceEEEEEEEEc-CCCccccccCCcc
Confidence 46777789998 57899999998 7898899876553
No 63
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=22.69 E-value=33 Score=36.01 Aligned_cols=58 Identities=14% Similarity=0.182 Sum_probs=32.1
Q ss_pred HHHhhcCCEEEEEEeCCCccccccCCCCCccCChhHH----HHHHHHHHhcCCCEEEEEecCcceecc
Q 006224 359 EVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQ----ELVSRVAKASRGPVVLVLMCGGPVDVS 422 (656)
Q Consensus 359 ~~~a~~aD~vIv~~G~~~~~~~Eg~Dr~~l~Lp~~Q~----~Li~~v~~~~~kpvVvVl~~g~P~~l~ 422 (656)
.+..++||+||++.|... .+|.+|.+| =..-. .+++++.+......++++. +||+++.
T Consensus 103 y~~~~daDvVVitag~pr---kpG~tR~DL--l~~N~~I~k~i~~~i~~~a~p~~ivlVv-sNPvD~~ 164 (375)
T 7mdh_A 103 YEVFEDVDWALLIGAKPR---GPGMERAAL--LDINGQIFADQGKALNAVASKNVKVLVV-GNPCNTN 164 (375)
T ss_dssp HHHTTTCSEEEECCCCCC---CTTCCHHHH--HHHHHHHHHHHHHHHHHHSCTTCEEEEC-SSSHHHH
T ss_pred HHHhCCCCEEEEcCCCCC---CCCCCHHHH--HHHHHHHHHHHHHHHHHhcCCCeEEEEe-cCchhHH
Confidence 456789999999876432 345556443 12222 2334454432334555444 6999873
No 64
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745}
Probab=21.98 E-value=1.6e+02 Score=27.09 Aligned_cols=57 Identities=14% Similarity=0.089 Sum_probs=39.2
Q ss_pred cccHHHHHHHhhcCCEEEEEEeCCCccccccCCCCCccCChhHHHHHHHHHH----------hcCCCEEEEEecCcce
Q 006224 352 NQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK----------ASRGPVVLVLMCGGPV 419 (656)
Q Consensus 352 ~~~~~~a~~~a~~aD~vIv~~G~~~~~~~Eg~Dr~~l~Lp~~Q~~Li~~v~~----------~~~kpvVvVl~~g~P~ 419 (656)
..++.+..+...+||.+|+..=.. .+..|+.-..+++.+.. -.+|+++++..+|+|-
T Consensus 39 ~~D~~~~~~~l~~aD~iV~~~P~y-----------~~~~pa~lK~~iDrv~~~g~~~~~~~~l~gK~~~~~~t~g~~~ 105 (177)
T 3ha2_A 39 DFNVEQEQSLLLQNDRIILEFPLY-----------WYSAPALLKQWMDTVMTTKFATGHQYALEGKELGIVVSTGDNG 105 (177)
T ss_dssp TCCHHHHHHHHHTCSEEEEEEECB-----------TTBCCHHHHHHHHHHSCHHHHSTTTCTTTTCEEEEEEEESSCG
T ss_pred cccHHHHHHHHHhCCEEEEECChh-----------hccCCHHHHHHHHHHhhcccccCCCcCCCCCEEEEEEeCCCCh
Confidence 345777788899999999875211 34567777778877632 1357777777777775
No 65
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=21.91 E-value=1.1e+02 Score=28.47 Aligned_cols=38 Identities=18% Similarity=0.155 Sum_probs=26.6
Q ss_pred cHHHHHHHhhcCCEEEEEEeCCCccccccCCCCCccCChhHHHHHHHHH
Q 006224 354 LIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA 402 (656)
Q Consensus 354 ~~~~a~~~a~~aD~vIv~~G~~~~~~~Eg~Dr~~l~Lp~~Q~~Li~~v~ 402 (656)
.+.+..+...+||.+|++.=.. ...+|+.=..+|+.+.
T Consensus 84 ~~~~~~~~l~~aD~iv~~~P~y-----------~~~~pa~lK~~iD~~~ 121 (208)
T 2hpv_A 84 RFNELTDQFLSADKVVIANPMW-----------NLNVPTRLKAWVDTIN 121 (208)
T ss_dssp HHHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCEEEEEeccc-----------cCCCCHHHHHHHHHHh
Confidence 3455667788999999876221 3467777778888875
No 66
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=21.47 E-value=1.2e+02 Score=29.04 Aligned_cols=38 Identities=13% Similarity=0.308 Sum_probs=26.9
Q ss_pred HHHHHHHhhcCCEEEEEEeCCCccccccCCCCCccCChhHHHHHHHHHH
Q 006224 355 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK 403 (656)
Q Consensus 355 ~~~a~~~a~~aD~vIv~~G~~~~~~~Eg~Dr~~l~Lp~~Q~~Li~~v~~ 403 (656)
..+..+....||.+|++.=.. +..+|+.-..+|+.+..
T Consensus 85 ~~~l~~~~~~aD~iv~~~P~y-----------~~~~p~~lK~~iD~~~~ 122 (223)
T 3u7i_A 85 MSEILQQFKSANTYVIVLPLH-----------NFNIPSKLKDYMDNIMI 122 (223)
T ss_dssp HHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHCC
T ss_pred HHHHHHHHHhCCEEEEEcChh-----------hccCCHHHHHHHHHHhh
Confidence 445667788999999876322 35677777788888753
No 67
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=20.75 E-value=1.2e+02 Score=27.55 Aligned_cols=36 Identities=11% Similarity=0.167 Sum_probs=24.5
Q ss_pred HHHHHHhhcCCEEEEEEeCCCccccccCCCCCccCChhHHHHHHHHH
Q 006224 356 GAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA 402 (656)
Q Consensus 356 ~~a~~~a~~aD~vIv~~G~~~~~~~Eg~Dr~~l~Lp~~Q~~Li~~v~ 402 (656)
.+..+...+||.+|++.= .+ ...+|+.-..+|+.+.
T Consensus 78 ~~~~~~l~~aD~iv~~~P---~y--------~~~~p~~lK~~iD~~~ 113 (201)
T 1t5b_A 78 DELIAELKAHDVIVIAAP---MY--------NFNIPTQLKNYFDLIA 113 (201)
T ss_dssp HHHHHHHHHCSEEEEECC---CB--------TTBCCHHHHHHHHHHC
T ss_pred HHHHHHHHhCCEEEEEeC---cc--------cCcCCHHHHHHHHHhe
Confidence 345567789999998652 11 2456777778888875
No 68
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=20.72 E-value=2e+02 Score=27.95 Aligned_cols=51 Identities=10% Similarity=0.031 Sum_probs=33.6
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCC-CCchhhhhcccc-cccCCCCeEEEEEEec
Q 006224 558 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKK-VHVTAGALQSVRLDIH 613 (656)
Q Consensus 558 ~v~v~VtNtG~~~G~evvQlY~~~~~~~-~~P~k~L~gF~k-v~L~pGes~~V~~~l~ 613 (656)
.++++|+|+|+.. -.||..+.+.... ..|. .-=== ..|+||+.+.|+|...
T Consensus 39 ~~sl~l~N~~~~P--~LvQsWv~~~~~~~~~pf---ivtPPlfRlep~~~q~lRIi~~ 91 (239)
T 4djm_A 39 GETLTVINDQDYP--MLVQSEVLSEDQKSPAPF---VVTPPLFRLDGQQSSRLRIVRT 91 (239)
T ss_dssp CEEEEEEECSSSC--EEEEEEEECTTSSSBCSE---EEESSEEEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCCc--EEEEEEEEcCCCCccCCE---EEcCCeEEECCCCceEEEEEEC
Confidence 4789999999764 8999999864332 1110 00001 2478999999999654
No 69
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=20.69 E-value=26 Score=35.79 Aligned_cols=58 Identities=17% Similarity=0.319 Sum_probs=29.4
Q ss_pred HHhhcCCEEEEEEeCCCccccccCCCCCccCCh--hHHHHHHHHHHhcCCCEEEEEecCcceecc
Q 006224 360 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPG--RQQELVSRVAKASRGPVVLVLMCGGPVDVS 422 (656)
Q Consensus 360 ~~a~~aD~vIv~~G~~~~~~~Eg~Dr~~l~Lp~--~Q~~Li~~v~~~~~kpvVvVl~~g~P~~l~ 422 (656)
+..++||+||++.|... .+|.+|.+|-.-. --.++++++.+.+ +..++++. +||+++.
T Consensus 65 ~a~~~aDvVii~ag~~~---kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivv-tNPvd~~ 124 (314)
T 3nep_X 65 GPTEDSDVCIITAGLPR---SPGMSRDDLLAKNTEIVGGVTEQFVEGS-PDSTIIVV-ANPLDVM 124 (314)
T ss_dssp GGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHHHTTC-TTCEEEEC-CSSHHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEec-CCchhHH
Confidence 35679999999988643 3444554431100 1134455555543 34554444 5999873
No 70
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=20.57 E-value=3e+02 Score=23.09 Aligned_cols=11 Identities=27% Similarity=0.441 Sum_probs=8.6
Q ss_pred EEEEEEEe--CCC
Q 006224 558 GLHVDIKN--TGD 568 (656)
Q Consensus 558 ~v~v~VtN--tG~ 568 (656)
.|+|+|+| ||+
T Consensus 46 ~vTItItNe~TG~ 58 (101)
T 3sd2_A 46 YAIITVTNKATGE 58 (101)
T ss_dssp CEEEEEEETTTCC
T ss_pred cEEEEEEECCCCc
Confidence 57888898 576
No 71
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=20.30 E-value=85 Score=35.57 Aligned_cols=57 Identities=12% Similarity=-0.053 Sum_probs=42.4
Q ss_pred cEEEEEEEEeCCCCCcceEEEEEEeCCCC--CCCchhhhhccc--ccccCCCCeEEEEEEecC
Q 006224 556 SLGLHVDIKNTGDMAGTHTLLVFAKPPAG--NWSPNKQLIGFK--KVHVTAGALQSVRLDIHV 614 (656)
Q Consensus 556 ~~~v~v~VtNtG~~~G~evvQlY~~~~~~--~~~P~k~L~gF~--kv~L~pGes~~V~~~l~~ 614 (656)
.+.|+++++|..+.. ..|+++++.-.- ...+..++..-+ .+.|+|+|+++|.+.|..
T Consensus 488 df~v~v~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~~l~p~~~~~v~~~i~y 548 (687)
T 2q3z_A 488 DFDVFAHITNNTAEE--YVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILY 548 (687)
T ss_dssp CEEEEEEEEECSSSC--EEEEEEEEEEEECTTCCEEEEEEEEEEEEEEECTTEEEEEEEEECH
T ss_pred CEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCcccceEeeeeeeEEEECCCceEEEEEEECH
Confidence 599999999998876 678888776432 255665552223 356899999999999986
No 72
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=20.05 E-value=1e+02 Score=25.15 Aligned_cols=18 Identities=17% Similarity=0.274 Sum_probs=14.1
Q ss_pred ccccccCCCCeEEEEEEe
Q 006224 595 FKKVHVTAGALQSVRLDI 612 (656)
Q Consensus 595 F~kv~L~pGes~~V~~~l 612 (656)
|..+.|.|||+.+++|+.
T Consensus 62 ~~~~~~~pG~~~~~~f~~ 79 (106)
T 2gim_A 62 HKQLLMSPGQSTSTTFPA 79 (106)
T ss_dssp BCSCCCSTTCEEEEECCT
T ss_pred ccceeeCCCCEEEEEEec
Confidence 556779999998887764
Done!