Query 006229
Match_columns 655
No_of_seqs 487 out of 2678
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 19:27:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006229.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006229hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 99.9 1.6E-20 5.4E-25 196.1 22.9 175 473-655 93-301 (321)
2 1got_B GT-beta; complex (GTP-b 99.8 8.4E-20 2.9E-24 191.2 22.7 180 470-655 65-281 (340)
3 3ow8_A WD repeat-containing pr 99.8 5.5E-20 1.9E-24 192.0 20.2 176 472-655 48-259 (321)
4 1vyh_C Platelet-activating fac 99.8 6E-20 2.1E-24 197.9 19.6 175 473-655 163-391 (410)
5 1vyh_C Platelet-activating fac 99.8 2.6E-19 8.9E-24 193.0 20.7 161 470-654 118-286 (410)
6 2hes_X YDR267CP; beta-propelle 99.8 3.4E-19 1.2E-23 186.0 20.7 165 474-655 26-208 (330)
7 3frx_A Guanine nucleotide-bind 99.8 4.9E-19 1.7E-23 183.9 21.4 173 473-655 31-248 (319)
8 2ynn_A Coatomer subunit beta'; 99.8 3.6E-19 1.2E-23 183.5 20.1 137 479-654 13-150 (304)
9 2ynn_A Coatomer subunit beta'; 99.8 5.7E-19 1.9E-23 181.9 20.8 178 471-655 66-281 (304)
10 3iz6_a 40S ribosomal protein R 99.8 7.1E-19 2.4E-23 187.2 21.0 186 470-655 76-309 (380)
11 3fm0_A Protein CIAO1; WDR39,SG 99.8 8.1E-19 2.8E-23 184.3 20.5 164 470-655 26-205 (345)
12 2pbi_B Guanine nucleotide-bind 99.8 1.5E-18 5E-23 183.4 22.4 180 470-655 74-295 (354)
13 2pbi_B Guanine nucleotide-bind 99.8 3.5E-18 1.2E-22 180.6 23.0 105 546-655 231-337 (354)
14 4gqb_B Methylosome protein 50; 99.8 1.8E-18 6.3E-23 183.2 20.5 159 473-655 94-268 (344)
15 3frx_A Guanine nucleotide-bind 99.8 2.9E-18 1E-22 178.0 21.2 122 507-643 31-152 (319)
16 4gqb_B Methylosome protein 50; 99.8 1.8E-18 6.1E-23 183.3 19.8 161 470-655 137-310 (344)
17 1got_B GT-beta; complex (GTP-b 99.8 4E-18 1.4E-22 178.4 22.0 158 474-655 156-323 (340)
18 4ery_A WD repeat-containing pr 99.8 4.5E-18 1.5E-22 174.2 21.9 163 470-655 33-203 (312)
19 3iz6_a 40S ribosomal protein R 99.8 2.6E-18 9E-23 182.8 20.5 131 506-655 218-355 (380)
20 4ery_A WD repeat-containing pr 99.8 5.7E-18 2E-22 173.4 22.1 126 506-655 35-160 (312)
21 1erj_A Transcriptional repress 99.8 3E-18 1E-22 183.2 20.7 177 469-645 132-358 (393)
22 4h5i_A Guanine nucleotide-exch 99.8 4.9E-18 1.7E-22 180.6 20.9 152 476-628 151-343 (365)
23 2hes_X YDR267CP; beta-propelle 99.8 4.6E-18 1.6E-22 177.4 19.4 144 471-629 69-231 (330)
24 3dm0_A Maltose-binding peripla 99.8 3.5E-18 1.2E-22 196.1 19.3 177 473-655 396-613 (694)
25 1nr0_A Actin interacting prote 99.8 1.2E-17 4.3E-22 189.2 23.1 180 470-655 28-250 (611)
26 2xzm_R RACK1; ribosome, transl 99.8 2.2E-17 7.6E-22 172.7 22.0 136 505-655 38-173 (343)
27 3dwl_C Actin-related protein 2 99.8 1.6E-18 5.5E-23 181.4 13.1 179 471-655 22-262 (377)
28 2pm7_B Protein transport prote 99.8 1.2E-17 4E-22 171.5 19.2 164 470-655 19-215 (297)
29 3vl1_A 26S proteasome regulato 99.8 8.3E-18 2.8E-22 178.3 18.2 149 471-638 67-222 (420)
30 2ymu_A WD-40 repeat protein; u 99.8 1.5E-17 5E-22 184.1 21.0 159 470-655 395-560 (577)
31 2xzm_R RACK1; ribosome, transl 99.8 2.9E-17 9.8E-22 171.8 22.0 159 471-655 38-224 (343)
32 3fm0_A Protein CIAO1; WDR39,SG 99.8 2.1E-17 7.2E-22 173.5 20.6 128 507-655 29-161 (345)
33 1nr0_A Actin interacting prote 99.8 2E-17 6.8E-22 187.5 21.8 111 508-637 162-279 (611)
34 4g56_B MGC81050 protein; prote 99.8 6.5E-18 2.2E-22 178.9 16.6 173 475-654 108-321 (357)
35 2pm7_B Protein transport prote 99.8 1.2E-17 4.1E-22 171.5 17.5 165 472-655 67-265 (297)
36 2aq5_A Coronin-1A; WD40 repeat 99.8 3.9E-17 1.3E-21 173.8 21.4 166 474-655 49-231 (402)
37 1erj_A Transcriptional repress 99.7 6.5E-17 2.2E-21 172.8 22.2 137 499-655 128-267 (393)
38 4aow_A Guanine nucleotide-bind 99.7 1E-16 3.5E-21 163.9 21.8 176 472-655 51-267 (340)
39 3lrv_A PRE-mRNA-splicing facto 99.7 1.7E-17 5.9E-22 173.3 15.7 159 475-655 88-271 (343)
40 1k8k_C P40, ARP2/3 complex 41 99.7 7.5E-17 2.6E-21 167.1 20.1 180 471-655 19-255 (372)
41 4e54_B DNA damage-binding prot 99.7 9.9E-18 3.4E-22 181.3 13.9 164 472-639 132-338 (435)
42 3dm0_A Maltose-binding peripla 99.7 6.5E-17 2.2E-21 185.5 20.4 133 507-655 396-528 (694)
43 4g56_B MGC81050 protein; prote 99.7 1.5E-17 5.3E-22 176.0 14.0 168 469-655 51-237 (357)
44 3f3f_A Nucleoporin SEH1; struc 99.7 1.2E-16 4.1E-21 161.7 19.9 150 470-629 21-250 (351)
45 3f3f_A Nucleoporin SEH1; struc 99.7 6.5E-17 2.2E-21 163.6 17.8 128 478-635 10-150 (351)
46 3vl1_A 26S proteasome regulato 99.7 4.9E-17 1.7E-21 172.3 16.4 162 471-655 108-301 (420)
47 3gre_A Serine/threonine-protei 99.7 2.5E-17 8.7E-22 176.4 14.1 167 471-640 75-304 (437)
48 1sq9_A Antiviral protein SKI8; 99.7 2E-16 6.9E-21 166.0 19.9 164 472-655 137-365 (397)
49 3bg1_A Protein SEC13 homolog; 99.7 9.3E-17 3.2E-21 166.5 16.9 166 473-638 72-306 (316)
50 3lrv_A PRE-mRNA-splicing facto 99.7 1.5E-16 5.2E-21 166.0 18.6 169 471-655 47-225 (343)
51 3bg1_A Protein SEC13 homolog; 99.7 6.6E-17 2.3E-21 167.6 15.4 139 480-655 14-161 (316)
52 1gxr_A ESG1, transducin-like e 99.7 7.4E-16 2.5E-20 156.7 22.9 161 471-655 62-235 (337)
53 3vu4_A KMHSV2; beta-propeller 99.7 2.6E-16 8.8E-21 166.3 19.4 83 548-630 188-273 (355)
54 3dwl_C Actin-related protein 2 99.7 3.4E-17 1.2E-21 171.3 11.9 128 506-655 23-157 (377)
55 2j04_B YDR362CP, TAU91; beta p 99.7 3.6E-17 1.2E-21 183.9 12.8 160 472-655 225-408 (524)
56 4h5i_A Guanine nucleotide-exch 99.7 2.4E-16 8.2E-21 167.5 18.2 148 502-655 141-323 (365)
57 2ymu_A WD-40 repeat protein; u 99.7 5.4E-16 1.8E-20 171.6 21.6 159 470-655 354-519 (577)
58 4aow_A Guanine nucleotide-bind 99.7 8.2E-16 2.8E-20 157.2 21.4 180 471-655 97-317 (340)
59 3dw8_B Serine/threonine-protei 99.7 3E-16 1E-20 167.4 18.6 185 470-655 38-296 (447)
60 3ei3_B DNA damage-binding prot 99.7 7.5E-16 2.6E-20 162.0 21.0 158 473-654 87-260 (383)
61 1r5m_A SIR4-interacting protei 99.7 4.8E-16 1.6E-20 163.0 19.5 176 471-655 119-341 (425)
62 3zwl_B Eukaryotic translation 99.7 6.1E-16 2.1E-20 159.0 19.7 179 471-655 43-270 (369)
63 2j04_B YDR362CP, TAU91; beta p 99.7 1.1E-16 3.8E-21 179.9 14.2 171 473-655 174-366 (524)
64 4gq1_A NUP37; propeller, trans 99.7 9.3E-17 3.2E-21 172.0 12.7 120 503-636 98-226 (393)
65 2vdu_B TRNA (guanine-N(7)-)-me 99.7 2.5E-16 8.4E-21 170.9 16.0 154 469-638 111-281 (450)
66 3mmy_A MRNA export factor; mRN 99.7 7.3E-16 2.5E-20 158.4 18.7 159 472-655 54-326 (368)
67 3ei3_B DNA damage-binding prot 99.7 4.3E-16 1.5E-20 163.8 17.4 147 472-639 131-293 (383)
68 3jrp_A Fusion protein of prote 99.7 1.2E-15 4.2E-20 157.7 20.4 140 478-654 10-157 (379)
69 4a11_B DNA excision repair pro 99.7 1.1E-15 3.8E-20 159.6 20.0 158 471-631 55-279 (408)
70 3jrp_A Fusion protein of prote 99.7 1.1E-15 3.6E-20 158.2 19.4 164 470-655 21-217 (379)
71 2aq5_A Coronin-1A; WD40 repeat 99.7 3.8E-16 1.3E-20 166.2 16.3 128 508-655 49-187 (402)
72 3v7d_B Cell division control p 99.7 1.3E-15 4.5E-20 164.3 20.5 96 547-644 262-357 (464)
73 2oaj_A Protein SNI1; WD40 repe 99.7 4.2E-16 1.4E-20 185.8 17.6 169 470-639 445-675 (902)
74 4aez_A CDC20, WD repeat-contai 99.7 1.6E-15 5.4E-20 161.8 20.3 156 474-655 105-270 (401)
75 4ggc_A P55CDC, cell division c 99.7 1.2E-15 4E-20 154.6 18.2 152 474-629 121-316 (318)
76 4e54_B DNA damage-binding prot 99.7 8.3E-16 2.8E-20 166.2 18.0 139 480-655 120-261 (435)
77 4gga_A P55CDC, cell division c 99.7 1.1E-15 3.9E-20 164.2 18.6 162 473-638 200-405 (420)
78 3mmy_A MRNA export factor; mRN 99.7 2.5E-15 8.7E-20 154.3 20.5 134 477-640 37-172 (368)
79 3mkq_A Coatomer beta'-subunit; 99.7 1.5E-15 5E-20 175.2 20.2 138 478-654 12-150 (814)
80 3v7d_B Cell division control p 99.7 3.9E-15 1.3E-19 160.6 22.3 158 474-636 175-389 (464)
81 2pm9_A Protein WEB1, protein t 99.7 1E-15 3.5E-20 161.3 17.2 160 472-655 126-316 (416)
82 2w18_A PALB2, fancn, partner a 99.7 1.5E-15 5E-20 162.2 18.3 128 503-655 190-337 (356)
83 3odt_A Protein DOA1; ubiquitin 99.7 2.9E-15 9.8E-20 151.0 19.3 156 472-655 114-277 (313)
84 2oaj_A Protein SNI1; WD40 repe 99.7 1E-15 3.6E-20 182.3 18.5 139 501-653 442-631 (902)
85 1p22_A F-BOX/WD-repeat protein 99.7 2.6E-15 8.9E-20 161.8 19.9 170 472-645 143-342 (435)
86 3sfz_A APAF-1, apoptotic pepti 99.7 2.8E-15 9.6E-20 181.8 22.1 137 480-655 616-754 (1249)
87 1r5m_A SIR4-interacting protei 99.7 1.8E-15 6.3E-20 158.5 17.7 159 474-655 219-405 (425)
88 3k26_A Polycomb protein EED; W 99.7 4.5E-16 1.6E-20 160.1 12.8 109 506-633 85-197 (366)
89 3i2n_A WD repeat-containing pr 99.6 1.6E-15 5.5E-20 155.8 16.7 160 471-655 128-332 (357)
90 1gxr_A ESG1, transducin-like e 99.6 5.9E-15 2E-19 150.0 20.7 129 505-655 62-194 (337)
91 4aez_A CDC20, WD repeat-contai 99.6 3.7E-15 1.3E-19 158.9 20.0 161 471-655 145-314 (401)
92 3k26_A Polycomb protein EED; W 99.6 5E-15 1.7E-19 152.3 20.3 146 478-655 17-172 (366)
93 2xyi_A Probable histone-bindin 99.6 3.8E-15 1.3E-19 160.9 20.3 166 473-655 142-332 (430)
94 1k8k_C P40, ARP2/3 complex 41 99.6 4.1E-15 1.4E-19 154.0 19.2 139 480-655 9-153 (372)
95 2j04_A TAU60, YPL007P, hypothe 99.6 1.5E-15 5.1E-20 171.4 17.0 99 553-655 83-193 (588)
96 2pm9_A Protein WEB1, protein t 99.6 1.8E-15 6.3E-20 159.4 16.1 162 479-655 42-225 (416)
97 3dw8_B Serine/threonine-protei 99.6 1.8E-15 6.1E-20 161.3 15.7 120 501-640 184-328 (447)
98 3odt_A Protein DOA1; ubiquitin 99.6 6.6E-15 2.2E-19 148.4 18.9 171 472-655 29-236 (313)
99 2oit_A Nucleoporin 214KDA; NH2 99.6 1.8E-15 6.3E-20 165.5 15.8 144 503-655 101-251 (434)
100 3sfz_A APAF-1, apoptotic pepti 99.6 3.5E-15 1.2E-19 181.0 19.6 151 469-638 624-784 (1249)
101 1sq9_A Antiviral protein SKI8; 99.6 2.1E-15 7.1E-20 158.2 15.2 169 473-655 82-302 (397)
102 2xyi_A Probable histone-bindin 99.6 4.7E-15 1.6E-19 160.3 18.3 161 474-655 196-389 (430)
103 2w18_A PALB2, fancn, partner a 99.6 2.1E-15 7.1E-20 161.0 15.2 135 471-626 192-355 (356)
104 3zwl_B Eukaryotic translation 99.6 1.5E-14 5.2E-19 148.6 20.8 130 502-655 183-326 (369)
105 1pgu_A Actin interacting prote 99.6 5.7E-15 2E-19 163.5 18.8 126 506-655 456-595 (615)
106 1yfq_A Cell cycle arrest prote 99.6 2.8E-15 9.7E-20 153.6 14.7 172 471-644 67-299 (342)
107 4a11_B DNA excision repair pro 99.6 5.7E-15 1.9E-19 154.2 17.3 163 473-639 157-376 (408)
108 3gre_A Serine/threonine-protei 99.6 6.2E-15 2.1E-19 157.7 17.0 143 507-654 77-267 (437)
109 1pgu_A Actin interacting prote 99.6 2.2E-14 7.5E-19 158.8 21.0 167 471-643 29-257 (615)
110 2ovr_B FBW7, F-BOX/WD repeat p 99.6 1.6E-14 5.3E-19 155.8 18.7 164 473-643 130-323 (445)
111 3mkq_A Coatomer beta'-subunit; 99.6 8.4E-15 2.9E-19 168.9 17.7 161 471-654 24-194 (814)
112 4ggc_A P55CDC, cell division c 99.6 1.7E-14 5.8E-19 146.0 17.8 174 474-655 38-295 (318)
113 1p22_A F-BOX/WD-repeat protein 99.6 1.1E-14 3.7E-19 157.0 16.6 165 472-643 183-389 (435)
114 4gga_A P55CDC, cell division c 99.6 3.3E-14 1.1E-18 152.7 20.2 181 469-655 156-375 (420)
115 3vu4_A KMHSV2; beta-propeller 99.6 3.4E-14 1.2E-18 150.0 19.3 173 469-655 28-251 (355)
116 3jro_A Fusion protein of prote 99.6 1.8E-14 6.2E-19 167.8 18.6 163 471-655 20-215 (753)
117 3i2n_A WD repeat-containing pr 99.6 1.8E-14 6.2E-19 147.9 16.1 165 472-655 80-270 (357)
118 2vdu_B TRNA (guanine-N(7)-)-me 99.6 6.5E-14 2.2E-18 151.8 20.5 157 473-655 162-365 (450)
119 3jro_A Fusion protein of prote 99.6 2.7E-14 9.3E-19 166.3 18.4 126 507-654 22-155 (753)
120 2ovr_B FBW7, F-BOX/WD repeat p 99.6 5.2E-14 1.8E-18 151.6 19.1 127 506-655 289-418 (445)
121 4gq1_A NUP37; propeller, trans 99.6 6.3E-15 2.2E-19 157.7 11.7 180 471-655 155-370 (393)
122 2j04_A TAU60, YPL007P, hypothe 99.6 5.4E-14 1.8E-18 158.8 18.4 156 469-641 94-267 (588)
123 1yfq_A Cell cycle arrest prote 99.6 1.4E-14 4.7E-19 148.5 12.3 137 480-655 12-161 (342)
124 1l0q_A Surface layer protein; 99.4 4E-12 1.4E-16 133.3 20.9 155 474-655 4-168 (391)
125 2oit_A Nucleoporin 214KDA; NH2 99.4 3.5E-13 1.2E-17 147.4 11.7 98 553-655 90-203 (434)
126 3bws_A Protein LP49; two-domai 99.4 2.3E-12 7.9E-17 137.1 16.8 135 501-655 129-264 (433)
127 1l0q_A Surface layer protein; 99.4 4.6E-12 1.6E-16 132.9 18.6 122 507-655 3-126 (391)
128 3bws_A Protein LP49; two-domai 99.4 9.7E-12 3.3E-16 132.3 20.9 158 472-655 134-313 (433)
129 2hqs_A Protein TOLB; TOLB, PAL 99.3 1.5E-10 5.3E-15 125.1 19.3 147 482-655 159-321 (415)
130 2hqs_A Protein TOLB; TOLB, PAL 99.2 9.3E-11 3.2E-15 126.8 15.9 101 548-655 171-277 (415)
131 1nir_A Nitrite reductase; hemo 99.2 4.9E-10 1.7E-14 126.1 17.7 111 507-638 150-267 (543)
132 2ojh_A Uncharacterized protein 99.1 2.5E-10 8.7E-15 112.7 13.3 131 502-655 136-282 (297)
133 2ecf_A Dipeptidyl peptidase IV 99.1 4E-10 1.4E-14 129.0 15.9 97 557-655 110-219 (741)
134 1ri6_A Putative isomerase YBHE 99.1 9.3E-10 3.2E-14 112.0 15.6 138 477-631 10-164 (343)
135 3u4y_A Uncharacterized protein 99.1 1.6E-09 5.4E-14 110.8 17.0 123 507-655 11-138 (331)
136 1xfd_A DIP, dipeptidyl aminope 99.1 3.4E-10 1.2E-14 129.1 12.8 103 552-655 110-265 (723)
137 3vgz_A Uncharacterized protein 99.1 5.9E-09 2E-13 106.9 20.4 103 546-655 175-282 (353)
138 3vgz_A Uncharacterized protein 99.1 4.6E-09 1.6E-13 107.7 19.2 155 481-655 68-241 (353)
139 1k32_A Tricorn protease; prote 99.0 2E-09 6.7E-14 129.6 16.9 100 550-655 373-482 (1045)
140 2ojh_A Uncharacterized protein 99.0 8.2E-09 2.8E-13 101.8 17.5 151 481-655 61-227 (297)
141 1xfd_A DIP, dipeptidyl aminope 99.0 4E-09 1.4E-13 120.3 16.4 154 482-655 91-316 (723)
142 1pby_B Quinohemoprotein amine 99.0 5E-09 1.7E-13 106.3 15.2 124 507-655 2-145 (337)
143 2z3z_A Dipeptidyl aminopeptida 99.0 4.1E-09 1.4E-13 120.1 16.2 168 481-654 100-319 (706)
144 2ecf_A Dipeptidyl peptidase IV 99.0 3.6E-09 1.2E-13 121.2 15.1 117 499-634 113-279 (741)
145 3u4y_A Uncharacterized protein 99.0 1.2E-08 4.1E-13 104.2 17.4 162 474-655 12-186 (331)
146 1pby_B Quinohemoprotein amine 99.0 2.2E-08 7.4E-13 101.5 19.0 86 552-640 237-322 (337)
147 3o4h_A Acylamino-acid-releasin 99.0 1.4E-09 4.7E-14 121.6 10.9 82 549-633 188-279 (582)
148 1nir_A Nitrite reductase; hemo 99.0 9.4E-09 3.2E-13 115.7 17.2 143 473-633 150-316 (543)
149 1jmx_B Amine dehydrogenase; ox 98.9 8.5E-09 2.9E-13 105.3 15.0 129 502-655 7-158 (349)
150 3o4h_A Acylamino-acid-releasin 98.9 5.6E-09 1.9E-13 116.7 14.5 79 559-639 153-237 (582)
151 1ri6_A Putative isomerase YBHE 98.9 7.2E-09 2.4E-13 105.4 13.6 124 508-655 7-139 (343)
152 2z3z_A Dipeptidyl aminopeptida 98.9 1.1E-08 3.9E-13 116.5 13.7 118 514-655 99-268 (706)
153 1z68_A Fibroblast activation p 98.9 3.6E-09 1.2E-13 121.0 9.6 105 508-634 29-145 (719)
154 3scy_A Hypothetical bacterial 98.9 1.1E-07 3.7E-12 99.0 19.7 96 554-655 209-316 (361)
155 1z68_A Fibroblast activation p 98.8 9.2E-09 3.2E-13 117.6 11.8 118 480-618 34-189 (719)
156 3scy_A Hypothetical bacterial 98.8 1.4E-07 4.7E-12 98.2 18.9 134 501-653 217-360 (361)
157 1k32_A Tricorn protease; prote 98.8 2.7E-08 9.2E-13 119.7 14.6 124 504-655 306-431 (1045)
158 3hfq_A Uncharacterized protein 98.8 2.2E-07 7.4E-12 96.0 19.4 133 502-655 148-296 (347)
159 3hfq_A Uncharacterized protein 98.8 1.2E-07 4.3E-12 97.8 17.3 145 473-632 153-323 (347)
160 1jmx_B Amine dehydrogenase; ox 98.8 1.6E-07 5.4E-12 95.8 17.9 143 473-638 12-185 (349)
161 4a5s_A Dipeptidyl peptidase 4 98.7 2.9E-08 1E-12 114.9 10.8 103 508-633 30-146 (740)
162 1jof_A Carboxy-CIS,CIS-muconat 98.7 9.8E-07 3.3E-11 92.7 21.1 78 554-631 143-229 (365)
163 3azo_A Aminopeptidase; POP fam 98.7 9.9E-08 3.4E-12 107.8 12.9 81 553-633 185-279 (662)
164 4a5s_A Dipeptidyl peptidase 4 98.6 1.8E-07 6E-12 108.4 14.6 68 550-618 106-191 (740)
165 1jof_A Carboxy-CIS,CIS-muconat 98.6 1E-06 3.4E-11 92.7 16.6 79 554-632 191-296 (365)
166 1xip_A Nucleoporin NUP159; bet 98.5 4E-07 1.4E-11 98.6 12.8 121 507-655 98-224 (388)
167 2oiz_A Aromatic amine dehydrog 98.5 3.5E-06 1.2E-10 89.3 19.6 88 560-655 258-358 (361)
168 3pe7_A Oligogalacturonate lyas 98.5 5.8E-07 2E-11 93.8 12.8 95 546-640 21-123 (388)
169 3azo_A Aminopeptidase; POP fam 98.5 7E-07 2.4E-11 100.8 14.3 96 554-655 128-252 (662)
170 1q7f_A NHL, brain tumor CG1071 98.5 5E-06 1.7E-10 83.4 19.1 98 553-655 161-261 (286)
171 3fvz_A Peptidyl-glycine alpha- 98.5 2.2E-06 7.5E-11 89.0 16.0 164 472-655 102-302 (329)
172 3pe7_A Oligogalacturonate lyas 98.5 3.3E-06 1.1E-10 88.0 17.4 100 549-654 74-197 (388)
173 1q7f_A NHL, brain tumor CG1071 98.5 3.9E-06 1.3E-10 84.2 16.8 135 473-629 133-281 (286)
174 2dg1_A DRP35, lactonase; beta 98.4 1.7E-06 5.8E-11 88.7 13.6 89 547-635 36-128 (333)
175 2gop_A Trilobed protease; beta 98.4 1.8E-06 6.1E-11 88.7 13.1 91 556-655 59-181 (347)
176 1xip_A Nucleoporin NUP159; bet 98.4 1.3E-06 4.4E-11 94.7 12.2 87 554-655 87-173 (388)
177 3fvz_A Peptidyl-glycine alpha- 98.4 1.6E-05 5.4E-10 82.4 19.7 127 501-637 97-236 (329)
178 2oiz_A Aromatic amine dehydrog 98.3 2.1E-06 7.2E-11 91.0 11.2 103 514-637 29-150 (361)
179 3e5z_A Putative gluconolactona 98.3 3.1E-05 1.1E-09 78.2 19.0 86 551-639 167-256 (296)
180 2dg1_A DRP35, lactonase; beta 98.3 4.5E-05 1.5E-09 78.0 19.9 108 506-632 56-175 (333)
181 2xdw_A Prolyl endopeptidase; a 98.3 5.4E-06 1.9E-10 95.3 14.3 71 558-628 173-268 (710)
182 2bkl_A Prolyl endopeptidase; m 98.2 8.6E-06 2.9E-10 93.5 14.5 101 511-630 142-263 (695)
183 1qks_A Cytochrome CD1 nitrite 98.1 3.9E-05 1.3E-09 86.9 17.5 111 507-638 168-285 (567)
184 3no2_A Uncharacterized protein 98.1 5.3E-05 1.8E-09 77.4 15.8 108 506-636 5-115 (276)
185 2gop_A Trilobed protease; beta 98.1 3.8E-05 1.3E-09 78.8 14.7 71 558-631 106-210 (347)
186 3no2_A Uncharacterized protein 98.1 8.7E-05 3E-09 75.8 17.4 142 473-638 6-164 (276)
187 3e5z_A Putative gluconolactona 98.1 2.3E-05 8E-10 79.1 13.0 84 549-634 21-105 (296)
188 3c5m_A Oligogalacturonate lyas 98.1 8E-06 2.7E-10 84.8 9.7 90 559-654 84-197 (396)
189 3c5m_A Oligogalacturonate lyas 98.1 7.2E-06 2.5E-10 85.1 8.8 82 558-639 38-122 (396)
190 2bkl_A Prolyl endopeptidase; m 98.1 5.7E-06 2E-10 95.0 8.7 76 553-630 118-213 (695)
191 2xdw_A Prolyl endopeptidase; a 98.1 1.1E-05 3.6E-10 92.9 10.8 76 554-630 123-219 (710)
192 1rwi_B Serine/threonine-protei 98.0 0.00013 4.3E-09 72.0 16.9 76 556-631 150-225 (270)
193 1rwi_B Serine/threonine-protei 97.9 0.00021 7.2E-09 70.3 16.3 77 556-632 108-184 (270)
194 1qks_A Cytochrome CD1 nitrite 97.9 0.00049 1.7E-08 77.9 19.9 146 474-637 169-382 (567)
195 1pjx_A Dfpase, DIISOPROPYLFLUO 97.8 0.00025 8.4E-09 71.4 14.5 80 549-628 218-299 (314)
196 1yr2_A Prolyl oligopeptidase; 97.8 0.00011 3.8E-09 84.9 13.0 80 558-638 211-315 (741)
197 1pjx_A Dfpase, DIISOPROPYLFLUO 97.8 0.00037 1.3E-08 70.1 15.1 94 556-654 172-277 (314)
198 3g4e_A Regucalcin; six bladed 97.8 0.00046 1.6E-08 70.2 15.9 93 556-653 149-249 (297)
199 3sjl_D Methylamine dehydrogena 97.7 0.00039 1.3E-08 75.1 15.3 91 546-638 70-179 (386)
200 3dsm_A Uncharacterized protein 97.7 0.00092 3.2E-08 69.3 16.5 83 556-641 225-314 (328)
201 3dsm_A Uncharacterized protein 97.6 0.00065 2.2E-08 70.4 14.9 110 507-638 55-171 (328)
202 3dr2_A Exported gluconolactona 97.6 0.0014 4.6E-08 66.9 16.3 123 474-632 39-182 (305)
203 2mad_H Methylamine dehydrogena 97.6 0.001 3.5E-08 70.9 16.0 77 560-637 70-166 (373)
204 2z2n_A Virginiamycin B lyase; 97.6 0.006 2.1E-07 60.2 20.4 78 554-633 97-175 (299)
205 1yr2_A Prolyl oligopeptidase; 97.5 0.0021 7.3E-08 74.1 18.9 79 550-629 262-351 (741)
206 2z2n_A Virginiamycin B lyase; 97.5 0.0053 1.8E-07 60.6 19.4 77 554-632 139-216 (299)
207 2ghs_A AGR_C_1268P; regucalcin 97.5 0.0024 8.1E-08 66.1 17.2 92 556-653 179-279 (326)
208 2hz6_A Endoplasmic reticulum t 97.5 0.00015 5.2E-09 76.9 7.9 77 561-639 124-203 (369)
209 2hz6_A Endoplasmic reticulum t 97.4 1.6E-05 5.6E-10 84.5 -1.1 109 506-636 9-119 (369)
210 3g4e_A Regucalcin; six bladed 97.4 0.0015 5.1E-08 66.4 13.2 68 550-617 193-261 (297)
211 2ghs_A AGR_C_1268P; regucalcin 97.3 0.01 3.5E-07 61.3 18.8 59 556-616 90-152 (326)
212 3c75_H MADH, methylamine dehyd 97.3 0.0025 8.5E-08 69.7 14.7 91 546-638 110-219 (426)
213 3hrp_A Uncharacterized protein 97.3 0.0028 9.7E-08 68.2 14.9 71 561-631 176-252 (409)
214 3iuj_A Prolyl endopeptidase; h 97.3 0.0014 4.7E-08 75.4 12.7 79 559-638 178-279 (693)
215 2qc5_A Streptogramin B lactona 97.2 0.031 1.1E-06 55.0 20.6 77 554-632 102-179 (300)
216 3iuj_A Prolyl endopeptidase; h 97.1 0.00045 1.5E-08 79.4 7.0 75 553-630 126-219 (693)
217 3dr2_A Exported gluconolactona 97.1 0.0039 1.3E-07 63.4 12.8 76 552-630 41-117 (305)
218 3hrp_A Uncharacterized protein 97.1 0.016 5.4E-07 62.3 18.0 76 554-629 217-299 (409)
219 2qe8_A Uncharacterized protein 97.0 0.0031 1.1E-07 65.6 11.5 85 553-637 64-163 (343)
220 2qc5_A Streptogramin B lactona 97.0 0.031 1E-06 55.0 17.7 77 554-632 60-137 (300)
221 1kb0_A Quinohemoprotein alcoho 97.0 0.0051 1.7E-07 70.9 13.6 62 577-639 457-518 (677)
222 1mda_H Methylamine dehydrogena 96.9 0.0024 8.2E-08 68.4 10.0 81 546-628 57-158 (368)
223 2mad_H Methylamine dehydrogena 96.9 0.0067 2.3E-07 64.6 12.7 77 558-635 269-357 (373)
224 2qe8_A Uncharacterized protein 96.9 0.0044 1.5E-07 64.4 11.0 88 546-637 10-111 (343)
225 1yiq_A Quinohemoprotein alcoho 96.7 0.013 4.4E-07 67.6 14.3 63 576-639 454-516 (689)
226 1mda_H Methylamine dehydrogena 96.7 0.0053 1.8E-07 65.7 10.1 80 560-640 268-358 (368)
227 2ece_A 462AA long hypothetical 96.6 0.04 1.4E-06 60.6 16.3 123 507-638 97-247 (462)
228 3sjl_D Methylamine dehydrogena 96.5 0.0069 2.4E-07 65.3 9.8 75 561-637 38-127 (386)
229 3c75_H MADH, methylamine dehyd 96.1 0.014 4.7E-07 63.8 9.2 75 560-635 323-409 (426)
230 3pbp_A Nucleoporin NUP82; beta 95.9 0.1 3.4E-06 57.0 14.4 97 557-654 67-189 (452)
231 2iwa_A Glutamine cyclotransfer 95.7 0.091 3.1E-06 53.7 13.0 94 561-655 110-216 (266)
232 3nol_A Glutamine cyclotransfer 95.7 0.095 3.2E-06 53.5 12.9 91 564-655 133-235 (262)
233 3nok_A Glutaminyl cyclase; bet 95.6 0.14 4.9E-06 52.3 13.9 106 546-655 127-245 (268)
234 2iwa_A Glutamine cyclotransfer 95.5 0.27 9.2E-06 50.2 15.3 75 560-638 70-145 (266)
235 3nok_A Glutaminyl cyclase; bet 95.4 0.16 5.4E-06 52.0 13.3 110 507-639 66-175 (268)
236 3iot_A Maltose-binding protein 95.4 0.018 6E-07 62.4 6.6 14 52-65 336-349 (449)
237 3mbr_X Glutamine cyclotransfer 95.3 0.35 1.2E-05 48.7 15.2 106 546-655 96-214 (243)
238 3hxj_A Pyrrolo-quinoline quino 95.2 0.23 8E-06 49.6 13.9 76 555-636 176-251 (330)
239 3q7m_A Lipoprotein YFGL, BAMB; 95.2 0.36 1.2E-05 49.9 15.6 71 566-638 102-172 (376)
240 2ad6_A Methanol dehydrogenase 95.2 0.12 4.1E-06 58.1 12.7 63 576-639 443-505 (571)
241 3hxj_A Pyrrolo-quinoline quino 95.1 0.15 5.1E-06 51.1 12.0 77 554-636 135-211 (330)
242 3q7m_A Lipoprotein YFGL, BAMB; 95.1 0.55 1.9E-05 48.5 16.6 70 566-637 276-346 (376)
243 1npe_A Nidogen, entactin; glyc 94.8 2.3 7.7E-05 41.7 19.5 73 556-628 79-155 (267)
244 2xe4_A Oligopeptidase B; hydro 94.8 0.032 1.1E-06 64.8 6.7 71 557-630 175-258 (751)
245 1kv9_A Type II quinohemoprotei 94.8 0.15 5.3E-06 58.3 12.3 63 576-639 437-499 (668)
246 2xe4_A Oligopeptidase B; hydro 94.6 0.17 5.9E-06 58.6 12.4 71 559-629 224-305 (751)
247 3mbr_X Glutamine cyclotransfer 94.6 0.8 2.8E-05 46.1 15.6 69 567-638 75-143 (243)
248 1yiq_A Quinohemoprotein alcoho 94.4 0.63 2.1E-05 53.5 16.4 78 559-636 238-346 (689)
249 2p9w_A MAL S 1 allergenic prot 94.4 0.59 2E-05 49.2 14.7 98 558-655 65-195 (334)
250 3nol_A Glutamine cyclotransfer 94.3 0.44 1.5E-05 48.6 13.1 91 545-638 31-126 (262)
251 1flg_A Protein (quinoprotein e 94.2 0.24 8.3E-06 55.9 11.9 64 576-640 465-528 (582)
252 1kb0_A Quinohemoprotein alcoho 94.0 0.78 2.7E-05 52.6 16.0 80 558-637 245-355 (677)
253 2ece_A 462AA long hypothetical 93.8 0.75 2.6E-05 50.5 14.6 72 558-629 190-290 (462)
254 2p4o_A Hypothetical protein; p 93.4 1.3 4.3E-05 44.8 14.6 85 545-632 22-108 (306)
255 1fwx_A Nitrous oxide reductase 93.1 0.082 2.8E-06 59.9 5.6 81 558-640 279-383 (595)
256 2fp8_A Strictosidine synthase; 92.9 3 0.0001 42.1 16.8 74 557-632 81-178 (322)
257 1npe_A Nidogen, entactin; glyc 92.8 7.5 0.00026 37.8 21.2 74 556-630 122-200 (267)
258 1w6s_A Methanol dehydrogenase 92.0 1.2 4.1E-05 50.5 13.4 64 575-639 451-514 (599)
259 1kv9_A Type II quinohemoprotei 92.0 2.7 9.1E-05 48.0 16.5 79 558-636 232-341 (668)
260 1fwx_A Nitrous oxide reductase 91.7 2.2 7.6E-05 48.3 15.0 62 557-619 135-216 (595)
261 3vp9_A General transcriptional 91.4 0.027 9.2E-07 48.2 -0.8 58 271-328 16-90 (92)
262 3tc9_A Hypothetical hydrolase; 91.2 2.9 9.9E-05 45.0 14.9 77 554-631 177-260 (430)
263 3pbp_A Nucleoporin NUP82; beta 91.2 1.2 4.3E-05 48.4 11.8 115 503-621 74-205 (452)
264 2fp8_A Strictosidine synthase; 91.0 1.2 4E-05 45.2 10.9 72 557-630 20-112 (322)
265 3qqz_A Putative uncharacterize 90.9 2.8 9.6E-05 42.2 13.5 81 549-630 20-102 (255)
266 3amr_A 3-phytase; beta-propell 90.7 6.9 0.00024 41.4 16.8 94 543-637 168-273 (355)
267 4hw6_A Hypothetical protein, I 90.5 2.4 8.3E-05 45.7 13.5 77 554-631 180-262 (433)
268 1k3i_A Galactose oxidase precu 90.3 1.6 5.6E-05 49.3 12.5 74 557-630 244-325 (656)
269 3v64_C Agrin; beta propeller, 90.1 10 0.00034 39.3 17.5 72 557-628 117-191 (349)
270 3qqz_A Putative uncharacterize 89.8 5.2 0.00018 40.3 14.4 99 557-655 71-183 (255)
271 3v65_B Low-density lipoprotein 89.4 19 0.00063 37.8 19.1 73 557-629 160-235 (386)
272 2p4o_A Hypothetical protein; p 89.1 7.3 0.00025 39.0 15.1 74 556-629 72-148 (306)
273 1ijq_A LDL receptor, low-densi 89.1 21 0.00071 36.1 20.3 73 556-628 77-152 (316)
274 4a2l_A BT_4663, two-component 88.1 6.7 0.00023 45.1 15.6 77 555-632 356-440 (795)
275 1tl2_A L10, protein (tachylect 88.0 0.32 1.1E-05 48.7 3.7 66 557-627 42-115 (236)
276 3v64_C Agrin; beta propeller, 87.7 25 0.00085 36.2 18.4 74 556-629 159-235 (349)
277 1uuj_A Platelet-activating fac 86.8 0.29 9.8E-06 41.6 2.2 38 3-41 5-42 (88)
278 2ism_A Putative oxidoreductase 86.8 7 0.00024 40.6 13.5 71 556-629 31-115 (352)
279 4a2l_A BT_4663, two-component 86.8 13 0.00045 42.6 17.1 76 555-632 405-484 (795)
280 3a9g_A Putative uncharacterize 85.7 5.9 0.0002 41.3 12.3 72 556-629 29-115 (354)
281 3das_A Putative oxidoreductase 85.4 7.9 0.00027 40.8 13.0 76 553-628 29-116 (347)
282 1cru_A Protein (soluble quinop 85.0 6.9 0.00023 42.5 12.8 53 556-608 27-87 (454)
283 3sre_A PON1, serum paraoxonase 84.5 6.3 0.00021 41.6 11.8 111 514-627 123-251 (355)
284 1k3i_A Galactose oxidase precu 84.3 1.3 4.4E-05 50.2 6.9 71 560-630 190-276 (656)
285 3v65_B Low-density lipoprotein 84.0 35 0.0012 35.6 17.5 74 556-629 202-278 (386)
286 3tc9_A Hypothetical hydrolase; 83.5 4.3 0.00015 43.6 10.2 71 557-627 227-300 (430)
287 2xtc_A F-box-like/WD repeat-co 83.5 0.74 2.5E-05 39.2 3.2 32 11-42 7-38 (90)
288 3p5b_L Low density lipoprotein 82.8 50 0.0017 34.7 20.6 75 555-629 158-235 (400)
289 2xbg_A YCF48-like protein; pho 82.7 15 0.00051 37.4 13.7 80 542-626 151-232 (327)
290 4gq2_M Nucleoporin NUP120; bet 82.6 10 0.00036 45.2 14.0 39 599-637 237-275 (950)
291 3das_A Putative oxidoreductase 81.8 44 0.0015 34.9 17.0 62 555-616 79-158 (347)
292 3sov_A LRP-6, low-density lipo 81.8 36 0.0012 34.6 16.2 72 557-628 80-154 (318)
293 1w6s_A Methanol dehydrogenase 81.8 31 0.0011 38.8 16.9 76 560-636 245-350 (599)
294 4fhn_B Nucleoporin NUP120; pro 81.3 5.4 0.00018 48.5 11.0 39 599-637 239-277 (1139)
295 2p9w_A MAL S 1 allergenic prot 80.5 10 0.00035 39.8 11.3 84 553-636 10-120 (334)
296 2ism_A Putative oxidoreductase 80.1 24 0.00083 36.4 14.3 61 556-616 75-153 (352)
297 4gq2_M Nucleoporin NUP120; bet 79.5 8.5 0.00029 45.9 11.7 39 556-594 236-274 (950)
298 3m0c_C LDL receptor, low-densi 77.8 1.1E+02 0.0038 35.5 20.7 76 555-630 470-548 (791)
299 2g8s_A Glucose/sorbosone dehyd 76.3 8.3 0.00028 40.1 9.3 70 557-628 19-107 (353)
300 3ei3_A DNA damage-binding prot 76.3 54 0.0018 40.0 17.6 77 556-635 514-598 (1158)
301 1cru_A Protein (soluble quinop 75.9 90 0.0031 33.5 17.8 63 555-617 76-163 (454)
302 3amr_A 3-phytase; beta-propell 75.7 26 0.0009 37.0 12.9 64 576-640 98-181 (355)
303 3p5b_L Low density lipoprotein 74.9 86 0.0029 32.8 19.1 74 556-629 202-278 (400)
304 3m0c_C LDL receptor, low-densi 74.9 99 0.0034 36.0 18.8 76 555-630 513-591 (791)
305 3v9f_A Two-component system se 74.7 28 0.00096 39.7 14.0 75 555-632 406-482 (781)
306 3v9f_A Two-component system se 73.9 36 0.0012 38.8 14.7 74 555-631 449-527 (781)
307 1n7d_A LDL receptor, low-densi 73.7 22 0.00076 40.7 12.7 73 556-628 496-571 (699)
308 3a9g_A Putative uncharacterize 73.6 55 0.0019 33.8 14.8 61 556-616 73-153 (354)
309 4hw6_A Hypothetical protein, I 73.6 7 0.00024 42.0 8.1 71 557-627 229-303 (433)
310 2ad6_A Methanol dehydrogenase 71.1 34 0.0012 38.0 13.2 70 567-638 115-195 (571)
311 3sov_A LRP-6, low-density lipo 71.0 93 0.0032 31.5 16.4 73 556-628 122-197 (318)
312 1ijq_A LDL receptor, low-densi 70.7 91 0.0031 31.2 19.7 73 556-628 120-195 (316)
313 2xbg_A YCF48-like protein; pho 69.1 27 0.00091 35.5 11.0 68 555-625 121-190 (327)
314 4fhn_B Nucleoporin NUP120; pro 67.4 7.5 0.00025 47.3 7.2 39 556-594 238-276 (1139)
315 1n7d_A LDL receptor, low-densi 66.6 40 0.0014 38.6 12.8 80 557-637 541-623 (699)
316 3f7f_A Nucleoporin NUP120; nuc 66.4 8.1 0.00028 44.7 6.8 37 599-637 223-259 (729)
317 2vpj_A Kelch-like protein 12; 66.1 69 0.0024 31.3 13.1 63 566-630 206-280 (301)
318 3kya_A Putative phosphatase; s 65.6 13 0.00044 41.1 8.1 70 558-627 249-340 (496)
319 1flg_A Protein (quinoprotein e 63.7 39 0.0013 37.6 11.8 79 559-638 249-365 (582)
320 2be1_A Serine/threonine-protei 63.1 12 0.0004 39.3 6.8 118 506-638 10-140 (339)
321 2xn4_A Kelch-like protein 2; s 60.8 50 0.0017 32.4 10.9 63 566-630 204-278 (302)
322 4asc_A Kelch repeat and BTB do 59.2 1.1E+02 0.0038 30.1 13.3 63 566-630 196-279 (315)
323 3kya_A Putative phosphatase; s 59.2 43 0.0015 36.9 10.8 70 557-627 187-277 (496)
324 3ei3_A DNA damage-binding prot 56.3 1.9E+02 0.0064 35.2 16.7 72 555-626 553-634 (1158)
325 3zwu_A Alkaline phosphatase PH 55.4 31 0.0011 38.9 9.0 57 559-615 479-548 (592)
326 2vpj_A Kelch-like protein 12; 54.0 1.1E+02 0.0039 29.6 12.2 63 566-630 159-233 (301)
327 1bpo_A Protein (clathrin); cla 53.2 2.6E+02 0.0089 30.6 17.1 45 598-642 259-303 (494)
328 3s94_A LRP-6, low-density lipo 49.9 93 0.0032 34.9 11.9 74 556-629 349-424 (619)
329 1zgk_A Kelch-like ECH-associat 48.9 1.1E+02 0.0036 30.3 11.0 63 566-630 215-289 (308)
330 3f7f_A Nucleoporin NUP120; nuc 48.7 21 0.00073 41.2 6.3 36 557-594 223-258 (729)
331 3ii7_A Kelch-like protein 7; p 48.6 1.3E+02 0.0043 29.5 11.5 63 566-630 101-180 (306)
332 3ii7_A Kelch-like protein 7; p 47.4 1.4E+02 0.0046 29.2 11.5 63 566-630 55-129 (306)
333 4a9v_A PHOX; hydrolase, beta-p 44.4 71 0.0024 36.0 9.5 60 557-616 477-549 (592)
334 3sre_A PON1, serum paraoxonase 43.7 60 0.002 34.0 8.4 79 557-636 222-308 (355)
335 2woz_A Kelch repeat and BTB do 43.4 2.2E+02 0.0074 28.0 12.4 64 566-631 206-290 (318)
336 2xn4_A Kelch-like protein 2; s 41.9 1.5E+02 0.0052 28.8 10.9 63 566-630 108-184 (302)
337 1tl2_A L10, protein (tachylect 41.2 74 0.0025 31.6 8.0 63 558-624 90-159 (236)
338 4a0p_A LRP6, LRP-6, low-densit 40.7 4.2E+02 0.015 29.5 16.0 79 556-636 166-245 (628)
339 3sbq_A Nitrous-oxide reductase 40.6 46 0.0016 37.6 7.1 69 559-628 326-408 (638)
340 4a0p_A LRP6, LRP-6, low-densit 40.4 4.3E+02 0.015 29.5 19.4 73 557-629 81-156 (628)
341 1zgk_A Kelch-like ECH-associat 39.7 1.4E+02 0.0048 29.3 10.3 63 566-630 168-242 (308)
342 2xzh_A Clathrin heavy chain 1; 39.5 1.7E+02 0.0057 30.9 10.8 70 558-627 262-331 (365)
343 2wg3_C Hedgehog-interacting pr 39.0 70 0.0024 34.7 8.3 52 557-608 15-79 (463)
344 1bpo_A Protein (clathrin); cla 33.4 2.8E+02 0.0094 30.4 11.6 70 558-627 261-330 (494)
345 2xzh_A Clathrin heavy chain 1; 33.4 3.9E+02 0.013 28.1 12.4 78 560-641 71-149 (365)
346 4asc_A Kelch repeat and BTB do 32.8 2.4E+02 0.0084 27.5 10.8 63 565-629 147-222 (315)
347 3s94_A LRP-6, low-density lipo 32.5 5.6E+02 0.019 28.4 17.7 72 556-627 84-158 (619)
348 2g8s_A Glucose/sorbosone dehyd 28.8 2.4E+02 0.0081 28.8 10.1 60 556-615 271-340 (353)
349 2uvk_A YJHT; unknown function, 27.7 3.2E+02 0.011 27.1 10.8 51 566-618 65-128 (357)
350 3q6k_A 43.2 kDa salivary prote 23.9 3.5E+02 0.012 28.5 10.4 79 557-635 88-197 (381)
351 1qb3_A Cyclin-dependent kinase 23.8 21 0.00071 32.8 0.6 11 25-35 13-23 (150)
352 2zwa_A Leucine carboxyl methyl 23.1 4.1E+02 0.014 30.0 11.5 70 560-630 543-637 (695)
353 2d68_A FOP, FGFR1OP; alpha hel 22.8 78 0.0027 26.3 3.9 31 10-40 19-49 (82)
354 3sbq_A Nitrous-oxide reductase 22.1 3.7E+02 0.013 30.4 10.3 115 507-629 336-479 (638)
355 3s25_A Hypothetical 7-bladed b 21.9 2.9E+02 0.01 27.7 9.1 71 560-635 108-183 (302)
356 2zwa_A Leucine carboxyl methyl 21.1 3.6E+02 0.012 30.4 10.5 66 565-630 499-579 (695)
357 2be1_A Serine/threonine-protei 20.2 2.1E+02 0.0071 29.7 7.6 68 568-635 11-83 (339)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.86 E-value=1.6e-20 Score=196.11 Aligned_cols=175 Identities=16% Similarity=0.288 Sum_probs=141.5
Q ss_pred ceeccCCCCceEEEEecCCCCc--------ccccCcccCCCCcEEEeccCCCcEEEEecCCCC-----------------
Q 006229 473 TLQHNGASSKSLLMFGSDGMGS--------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDA----------------- 527 (655)
Q Consensus 473 ~~~~s~S~d~s~l~ws~dg~~~--------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~----------------- 527 (655)
..+.+++.|+.+.+|+...... ..+....+.+.+.+|++|+.|+.|++|+...+.
T Consensus 93 ~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~ 172 (321)
T 3ow8_A 93 PIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAY 172 (321)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEE
T ss_pred CEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEE
Confidence 4667777888888888764211 112223456667888888888888888765442
Q ss_pred ---------CCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCC
Q 006229 528 ---------DPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQ 598 (655)
Q Consensus 528 ---------d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~ 598 (655)
...+..+++|+..++ +.+..+.+|...|.+|+|+|++++|++|+.|++|+|||+++++++.++.+|..
T Consensus 173 spdg~~lasg~~dg~i~iwd~~~~---~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~ 249 (321)
T 3ow8_A 173 SPDGKYLASGAIDGIINIFDIATG---KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS 249 (321)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTT---EEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSS
T ss_pred CCCCCEEEEEcCCCeEEEEECCCC---cEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCC
Confidence 112444567776655 56778899999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 599 WITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 599 ~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
.|++|+|+|++.+|+||+.|++|+|||+++++++.++..|... |.+++|+|+
T Consensus 250 ~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~-----v~~v~~s~~ 301 (321)
T 3ow8_A 250 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQ-----VWGVKYNGN 301 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC-----EEEEEECTT
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCc-----EEEEEECCC
Confidence 9999999999999999999999999999999999999887654 457777774
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.84 E-value=8.4e-20 Score=191.16 Aligned_cols=180 Identities=20% Similarity=0.262 Sum_probs=144.8
Q ss_pred CCCceeccCCCCceEEEEecCCCCcc--------cccCcccCCCCcEEEeccCCCcEEEEecCCCC--------------
Q 006229 470 SRPTLQHNGASSKSLLMFGSDGMGSL--------TSAPNQLTDMDRFVDDGSLDDNVESFLSPDDA-------------- 527 (655)
Q Consensus 470 s~~~~~~s~S~d~s~l~ws~dg~~~l--------asss~~l~~~~~~LasGS~D~tV~vW~s~d~~-------------- 527 (655)
++...+.+++.|+.+.+|+......+ .+....+.+.+.++++|+.|+.|++|+.....
T Consensus 65 ~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~ 144 (340)
T 1got_B 65 TDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTG 144 (340)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSS
T ss_pred CCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCc
Confidence 34467888889999999987643211 12233566777899999999999999765431
Q ss_pred ---------------CCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE
Q 006229 528 ---------------DPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKST 592 (655)
Q Consensus 528 ---------------d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~t 592 (655)
...+..+++|++.++ ..+..+.+|.+.|.+++|+|++++|++|+.|++|+|||++++.++.+
T Consensus 145 ~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~ 221 (340)
T 1got_B 145 YLSCCRFLDDNQIVTSSGDTTCALWDIETG---QQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT 221 (340)
T ss_dssp CEEEEEEEETTEEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEE
T ss_pred cEEEEEECCCCcEEEEECCCcEEEEECCCC---cEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEE
Confidence 112445577777665 56778889999999999999999999999999999999999999999
Q ss_pred ecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 593 LEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 593 l~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+.+|...|++|+|+|++.+|++|+.|++|+|||++++..+..+..... ...|.+++|+|+
T Consensus 222 ~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~---~~~v~~~~~s~~ 281 (340)
T 1got_B 222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNI---ICGITSVSFSKS 281 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTC---CSCEEEEEECTT
T ss_pred EcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCc---ccceEEEEECCC
Confidence 999999999999999999999999999999999999988877754322 124667888885
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.84 E-value=5.5e-20 Score=192.00 Aligned_cols=176 Identities=18% Similarity=0.201 Sum_probs=141.7
Q ss_pred CceeccCCCCceEEEEecCCCC----------cccccCcccCCCCcEEEeccCCCcEEEEecCCCCC-------------
Q 006229 472 PTLQHNGASSKSLLMFGSDGMG----------SLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDAD------------- 528 (655)
Q Consensus 472 ~~~~~s~S~d~s~l~ws~dg~~----------~lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d------------- 528 (655)
...+++++.|+++.+|+..... ...+....+.+...++++++.|++|++|+..++..
T Consensus 48 ~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~ 127 (321)
T 3ow8_A 48 SETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWT 127 (321)
T ss_dssp -CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCC
T ss_pred CCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEE
Confidence 3578888999999999865421 11223334566668899999999999998765430
Q ss_pred -------------CCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecc
Q 006229 529 -------------PRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEE 595 (655)
Q Consensus 529 -------------~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~g 595 (655)
..+..+++|+...+ .....+..|...|.+++|+|+|++|++|+.|++|+|||+++++++.++.+
T Consensus 128 ~~~spdg~~l~~g~~dg~v~i~~~~~~---~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~ 204 (321)
T 3ow8_A 128 LAFSPDSQYLATGTHVGKVNIFGVESG---KKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG 204 (321)
T ss_dssp EEECTTSSEEEEECTTSEEEEEETTTC---SEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEECCCCCEEEEEcCCCcEEEEEcCCC---ceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc
Confidence 11233455655544 44556778889999999999999999999999999999999999999999
Q ss_pred cCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 596 HTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 596 H~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
|...|++|+|+|++.+|++|+.|++|+|||++++.++..+.+|... |.+++|+|+
T Consensus 205 h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~-----v~~~~~sp~ 259 (321)
T 3ow8_A 205 HAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASW-----VLNVAFCPD 259 (321)
T ss_dssp CSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSC-----EEEEEECTT
T ss_pred cCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCc-----eEEEEECCC
Confidence 9999999999999999999999999999999999999999888664 456778775
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.83 E-value=6e-20 Score=197.93 Aligned_cols=175 Identities=19% Similarity=0.280 Sum_probs=133.5
Q ss_pred ceeccCCCCceEEEEecCCCCc--------ccccCcccCCCCcEEEeccCCCcEEEEecCCCC-----------------
Q 006229 473 TLQHNGASSKSLLMFGSDGMGS--------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDA----------------- 527 (655)
Q Consensus 473 ~~~~s~S~d~s~l~ws~dg~~~--------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~----------------- 527 (655)
..+.+++.|+.+.+|+..+... ..+....+.+.+.+|++|+.|++|++|+...+.
T Consensus 163 ~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~ 242 (410)
T 1vyh_C 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242 (410)
T ss_dssp SEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred CEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEE
Confidence 4556666667777776654211 112222445555667777777777777654432
Q ss_pred ---------CCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCC--------------------CCEEEEEeCCCc
Q 006229 528 ---------DPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPD--------------------GKLLATGGHDKK 578 (655)
Q Consensus 528 ---------d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpd--------------------G~lLaSgs~Dgt 578 (655)
.+.+..+++|+...+ .++..+.+|...|.|++|+|+ |.+|++|+.|++
T Consensus 243 ~~~g~~l~s~s~D~~v~vwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~ 319 (410)
T 1vyh_C 243 NQDGTLIASCSNDQTVRVWVVATK---ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319 (410)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTC---CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCC---ceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe
Confidence 112334455655544 456678899999999999996 679999999999
Q ss_pred EEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 579 AVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 579 VrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
|+|||++++.++.++.+|...|++|+|+|++.+|+||+.|++|+|||+++++++..+..|... |.+++|+|+
T Consensus 320 i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~-----v~~l~~~~~ 391 (410)
T 1vyh_C 320 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF-----VTSLDFHKT 391 (410)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSC-----EEEEEECSS
T ss_pred EEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCc-----EEEEEEcCC
Confidence 999999999999999999999999999999999999999999999999999999999888654 557788874
No 5
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.82 E-value=2.6e-19 Score=192.97 Aligned_cols=161 Identities=15% Similarity=0.218 Sum_probs=136.4
Q ss_pred CCCceeccCCCCceEEEEecCCCCc--------ccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCC
Q 006229 470 SRPTLQHNGASSKSLLMFGSDGMGS--------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGK 541 (655)
Q Consensus 470 s~~~~~~s~S~d~s~l~ws~dg~~~--------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~ 541 (655)
++...+++++.|+.+.+|+...... -.+....+.+.+.+|++|+.|++|++|+....
T Consensus 118 p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~--------------- 182 (410)
T 1vyh_C 118 PVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--------------- 182 (410)
T ss_dssp SSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS---------------
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC---------------
Confidence 3456788888999999999765211 11223355667789999999999999965432
Q ss_pred CceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcE
Q 006229 542 GFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTV 621 (655)
Q Consensus 542 ~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtV 621 (655)
.++..+.+|...|.+|+|+|++.+|++|+.|++|++||++++.++.++.+|...|++++|+|++.+|+||+.|++|
T Consensus 183 ----~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v 258 (410)
T 1vyh_C 183 ----ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258 (410)
T ss_dssp ----CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ----ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeE
Confidence 4677888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCCeEEEEEecccceeeeeceeeEEEec
Q 006229 622 RVWDTENVRKLTFICCYKCIFVSTAIGSCFFAP 654 (655)
Q Consensus 622 rVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P 654 (655)
+|||++++.++..+..|... |.+++|+|
T Consensus 259 ~vwd~~~~~~~~~~~~h~~~-----v~~~~~~~ 286 (410)
T 1vyh_C 259 RVWVVATKECKAELREHRHV-----VECISWAP 286 (410)
T ss_dssp EEEETTTCCEEEEECCCSSC-----EEEEEECC
T ss_pred EEEECCCCceeeEecCCCce-----EEEEEEcC
Confidence 99999999999999887654 44666666
No 6
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.82 E-value=3.4e-19 Score=185.99 Aligned_cols=165 Identities=24% Similarity=0.354 Sum_probs=125.8
Q ss_pred eeccCCCCceEEEEecCCCC------------cccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCC
Q 006229 474 LQHNGASSKSLLMFGSDGMG------------SLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGK 541 (655)
Q Consensus 474 ~~~s~S~d~s~l~ws~dg~~------------~lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~ 541 (655)
++++++.|+.+.+|+..... .-.+....+.+.+.+|++|+.|++|++|+...... .
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~------------~ 93 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESAD------------R 93 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC------------------
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcC------------c
Confidence 67788889999999876421 11122335567778999999999999996543210 0
Q ss_pred CceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCC----CeEEEEecccCCCEEEEEEcCCCCEEEEEeC
Q 006229 542 GFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES----FTVKSTLEEHTQWITDVRFSPSLSRLATSSA 617 (655)
Q Consensus 542 ~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t----~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~ 617 (655)
......+..+.+|...|.+|+|+|+|++|++|+.|++|+|||++. .+++.++.+|...|++|+|+|++.+|+||+.
T Consensus 94 ~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~ 173 (330)
T 2hes_X 94 TFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSY 173 (330)
T ss_dssp -CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEET
T ss_pred cccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcC
Confidence 112356778899999999999999999999999999999999942 3678899999999999999999999999999
Q ss_pred CCcEEEEECCCC--eEEEEEecccceeeeeceeeEEEecC
Q 006229 618 DRTVRVWDTENV--RKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 618 DgtVrVWDl~tg--~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
|++|+|||++++ +++..+.+|...+ .++.|+|+
T Consensus 174 D~~i~iW~~~~~~~~~~~~~~~h~~~v-----~~~~~~~~ 208 (330)
T 2hes_X 174 DDTVRIWKDYDDDWECVAVLNGHEGTV-----WSSDFDKT 208 (330)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCE-----EEEEECCS
T ss_pred CCeEEEEECCCCCeeEEEEccCCCCcE-----EEEEecCC
Confidence 999999999876 6888888886544 45666663
No 7
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.82 E-value=4.9e-19 Score=183.94 Aligned_cols=173 Identities=16% Similarity=0.258 Sum_probs=140.0
Q ss_pred ceeccCCCCceEEEEecCCCC-------------cccccCcccCCCCcEEEeccCCCcEEEEecCCCC------------
Q 006229 473 TLQHNGASSKSLLMFGSDGMG-------------SLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDA------------ 527 (655)
Q Consensus 473 ~~~~s~S~d~s~l~ws~dg~~-------------~lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~------------ 527 (655)
.++.+++.|+++.+|+..+.. ...+....+.+.+.++++|+.|++|++|+..++.
T Consensus 31 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v 110 (319)
T 3frx_A 31 NLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDV 110 (319)
T ss_dssp TEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred cEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcE
Confidence 577888889999999765311 1122233556677889999999999999876543
Q ss_pred --------------CCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCC------CCEEEEEeCCCcEEEEeCCCC
Q 006229 528 --------------DPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPD------GKLLATGGHDKKAVLWCTESF 587 (655)
Q Consensus 528 --------------d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpd------G~lLaSgs~DgtVrIWDl~t~ 587 (655)
...+..+++|+... .++..+.+|...|.++.|+|. +.+|++|+.|++|++||++++
T Consensus 111 ~~~~~~~~~~~l~s~s~D~~i~vwd~~~----~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~ 186 (319)
T 3frx_A 111 MSVDIDKKASMIISGSRDKTIKVWTIKG----QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF 186 (319)
T ss_dssp EEEEECTTSCEEEEEETTSCEEEEETTS----CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCC----CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc
Confidence 12344557777653 466778899999999999984 458999999999999999999
Q ss_pred eEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 588 TVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 588 ~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
++...+.+|...|++|+|+|++++|+||+.|++|+|||+++++++..+..+. .|.+++|+|+
T Consensus 187 ~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------~v~~~~~sp~ 248 (319)
T 3frx_A 187 QIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD------EVFSLAFSPN 248 (319)
T ss_dssp EEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCS------CEEEEEECSS
T ss_pred hhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC------cEEEEEEcCC
Confidence 9999999999999999999999999999999999999999999998887653 3567888885
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.82 E-value=3.6e-19 Score=183.47 Aligned_cols=137 Identities=17% Similarity=0.219 Sum_probs=117.5
Q ss_pred CCCceEEEEecCCCCcccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCe
Q 006229 479 ASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKV 558 (655)
Q Consensus 479 S~d~s~l~ws~dg~~~lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V 558 (655)
......+.|+|++ .+|++|+.|++|++|+...+ .++..+..|...|
T Consensus 13 ~~~V~~~~fsp~~---------------~~l~s~~~dg~v~lWd~~~~-------------------~~~~~~~~~~~~v 58 (304)
T 2ynn_A 13 SDRVKGIDFHPTE---------------PWVLTTLYSGRVELWNYETQ-------------------VEVRSIQVTETPV 58 (304)
T ss_dssp CSCEEEEEECSSS---------------SEEEEEETTSEEEEEETTTT-------------------EEEEEEECCSSCE
T ss_pred CCceEEEEECCCC---------------CEEEEEcCCCcEEEEECCCC-------------------ceeEEeeccCCcE
Confidence 3445666666654 48899999999999966544 4677888999999
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-eEEEEEec
Q 006229 559 ESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENV-RKLTFICC 637 (655)
Q Consensus 559 ~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg-~~v~~l~~ 637 (655)
.+++|++++++|++|+.|++|+|||+.+++++..+.+|.+.|++|+|+|++.+|+||+.|++|+|||++++ .+...+.+
T Consensus 59 ~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~ 138 (304)
T 2ynn_A 59 RAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG 138 (304)
T ss_dssp EEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECC
T ss_pred EEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987 45566777
Q ss_pred ccceeeeeceeeEEEec
Q 006229 638 YKCIFVSTAIGSCFFAP 654 (655)
Q Consensus 638 ~~~~v~s~~Vss~~F~P 654 (655)
|... |.+++|+|
T Consensus 139 h~~~-----v~~v~~~p 150 (304)
T 2ynn_A 139 HEHF-----VMCVAFNP 150 (304)
T ss_dssp CCSC-----EEEEEECT
T ss_pred cCCc-----EEEEEECC
Confidence 7554 45677777
No 9
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.81 E-value=5.7e-19 Score=181.94 Aligned_cols=178 Identities=18% Similarity=0.208 Sum_probs=135.1
Q ss_pred CCceeccCCCCceEEEEecCCCCcc--------cccCcccCCCCcEEEeccCCCcEEEEecCCCC---------------
Q 006229 471 RPTLQHNGASSKSLLMFGSDGMGSL--------TSAPNQLTDMDRFVDDGSLDDNVESFLSPDDA--------------- 527 (655)
Q Consensus 471 ~~~~~~s~S~d~s~l~ws~dg~~~l--------asss~~l~~~~~~LasGS~D~tV~vW~s~d~~--------------- 527 (655)
....+.+++.++.+.+|+......+ .+....+.+.+.+|++|+.|++|++|+...+.
T Consensus 66 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~ 145 (304)
T 2ynn_A 66 RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMC 145 (304)
T ss_dssp GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEE
T ss_pred CCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEE
Confidence 3356777788888888887642211 12233556667788888899999988754431
Q ss_pred -------------CCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcC--CCCEEEEEeCCCcEEEEeCCCCeEEEE
Q 006229 528 -------------DPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSP--DGKLLATGGHDKKAVLWCTESFTVKST 592 (655)
Q Consensus 528 -------------d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSp--dG~lLaSgs~DgtVrIWDl~t~~~l~t 592 (655)
...+..+++|++...... .....+|...|.+++|+| ++.+|++|+.|++|+|||+++++++.+
T Consensus 146 v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~ 223 (304)
T 2ynn_A 146 VAFNPKDPSTFASGCLDRTVKVWSLGQSTPN--FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT 223 (304)
T ss_dssp EEECTTCTTEEEEEETTSEEEEEETTCSSCS--EEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEECCCCCCEEEEEeCCCeEEEEECCCCCcc--ceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcccee
Confidence 112334466666543221 222346778899999987 788999999999999999999999999
Q ss_pred ecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 593 LEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 593 l~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+.+|...|++++|+|++.+|+||+.|++|+|||+++++++..+..+...+ .+++|+|+
T Consensus 224 ~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~-----~~~~~~~~ 281 (304)
T 2ynn_A 224 LEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERS-----WCIATHPT 281 (304)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSE-----EEEEECTT
T ss_pred eCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccE-----EEEEECCC
Confidence 99999999999999999999999999999999999999999998775543 35666663
No 10
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.81 E-value=7.1e-19 Score=187.16 Aligned_cols=186 Identities=18% Similarity=0.189 Sum_probs=143.1
Q ss_pred CCCceeccCCCCceEEEEecCCCCc--------ccccCcccCCCCcEEEeccCCCcEEEEecCCCC--------------
Q 006229 470 SRPTLQHNGASSKSLLMFGSDGMGS--------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDA-------------- 527 (655)
Q Consensus 470 s~~~~~~s~S~d~s~l~ws~dg~~~--------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~-------------- 527 (655)
++...+++++.|+++.+|+...... ..+....+.+.+.+|++|+.|++|++|+.....
T Consensus 76 p~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~g 155 (380)
T 3iz6_a 76 PEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTG 155 (380)
T ss_dssp TTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCC
T ss_pred CCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccC
Confidence 4456788889999999999765221 123344667788999999999999999754211
Q ss_pred --------------------CCCCccccccccCCCceeeeEE--eecCCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEeC
Q 006229 528 --------------------DPRDRVGRSAEVGKGFTFTEFQ--LIPASTSKVESCHFSP-DGKLLATGGHDKKAVLWCT 584 (655)
Q Consensus 528 --------------------d~~d~~~~l~d~~~~~t~~~v~--~l~gH~~~V~sl~fSp-dG~lLaSgs~DgtVrIWDl 584 (655)
...+..+++|++.++.....+. ...+|...|.+++|++ ++.+|++|+.|++|+|||+
T Consensus 156 h~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~ 235 (380)
T 3iz6_a 156 HKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDL 235 (380)
T ss_dssp CSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEET
T ss_pred CCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEEC
Confidence 1234556778777663332221 1168999999999987 8999999999999999999
Q ss_pred C-CCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccce--eeeeceeeEEEecC
Q 006229 585 E-SFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCI--FVSTAIGSCFFAPT 655 (655)
Q Consensus 585 ~-t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~--v~s~~Vss~~F~P~ 655 (655)
+ +.+++.++.+|...|++|+|+|++.+|+|||.|++|+|||++++.++..+..+... .....|.+++|+|+
T Consensus 236 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 309 (380)
T 3iz6_a 236 RITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSIS 309 (380)
T ss_dssp TTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSS
T ss_pred CCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCC
Confidence 8 55788899999999999999999999999999999999999999999888654322 11223678888885
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.81 E-value=8.1e-19 Score=184.27 Aligned_cols=164 Identities=23% Similarity=0.323 Sum_probs=133.6
Q ss_pred CCCceeccCCCCceEEEEecCCCCc-----------ccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccc
Q 006229 470 SRPTLQHNGASSKSLLMFGSDGMGS-----------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAE 538 (655)
Q Consensus 470 s~~~~~~s~S~d~s~l~ws~dg~~~-----------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d 538 (655)
++..++++++.|+.+.+|+.++... -.+....+.+.+.+|++|+.|++|++|+...+
T Consensus 26 p~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~------------ 93 (345)
T 3fm0_A 26 PAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQD------------ 93 (345)
T ss_dssp TTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC------------
T ss_pred CCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCC------------
Confidence 4456788888999999998865321 11223356677789999999999999965433
Q ss_pred cCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCC---eEEEEecccCCCEEEEEEcCCCCEEEEE
Q 006229 539 VGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESF---TVKSTLEEHTQWITDVRFSPSLSRLATS 615 (655)
Q Consensus 539 ~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~---~~l~tl~gH~~~ItsVafsPdg~~LaSg 615 (655)
...++..+.+|...|.+|+|+|++++|++|+.|++|+|||++++ .++..+.+|...|++|+|+|++.+|++|
T Consensus 94 -----~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~ 168 (345)
T 3fm0_A 94 -----DFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASA 168 (345)
T ss_dssp ------EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEE
T ss_pred -----CeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEE
Confidence 23467788999999999999999999999999999999999865 5677889999999999999999999999
Q ss_pred eCCCcEEEEECCCCe--EEEEEecccceeeeeceeeEEEecC
Q 006229 616 SADRTVRVWDTENVR--KLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 616 S~DgtVrVWDl~tg~--~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+.|++|+|||++++. ++..+.+|... |.+++|+|+
T Consensus 169 s~d~~i~~w~~~~~~~~~~~~~~~h~~~-----v~~l~~sp~ 205 (345)
T 3fm0_A 169 SYDDTVKLYREEEDDWVCCATLEGHEST-----VWSLAFDPS 205 (345)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCSSC-----EEEEEECTT
T ss_pred eCCCcEEEEEecCCCEEEEEEecCCCCc-----eEEEEECCC
Confidence 999999999998875 45677777554 557888875
No 12
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.81 E-value=1.5e-18 Score=183.45 Aligned_cols=180 Identities=19% Similarity=0.232 Sum_probs=141.6
Q ss_pred CCCceeccCCCCceEEEEecCCCCc--------ccccCcccCCCCcEEEeccCCCcEEEEecCCCC--------------
Q 006229 470 SRPTLQHNGASSKSLLMFGSDGMGS--------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDA-------------- 527 (655)
Q Consensus 470 s~~~~~~s~S~d~s~l~ws~dg~~~--------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~-------------- 527 (655)
++...+++++.|+++.+|+...... ..+....+.+.+.++++|+.|+.|++|......
T Consensus 74 ~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h 153 (354)
T 2pbi_B 74 KDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMH 153 (354)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEEC
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeecc
Confidence 3446788888999999998654211 112233566777889999999999998553221
Q ss_pred ------------------CCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcC--CCCEEEEEeCCCcEEEEeCCCC
Q 006229 528 ------------------DPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSP--DGKLLATGGHDKKAVLWCTESF 587 (655)
Q Consensus 528 ------------------d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSp--dG~lLaSgs~DgtVrIWDl~t~ 587 (655)
...+..+++|++.++ ..+..+.+|...|.+++|+| +|++|++|+.|++|++||++++
T Consensus 154 ~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~ 230 (354)
T 2pbi_B 154 TNYLSACSFTNSDMQILTASGDGTCALWDVESG---QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSG 230 (354)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETTTC---CEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTC
T ss_pred CCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC---eEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCC
Confidence 123455677877665 56778889999999999988 5789999999999999999999
Q ss_pred eEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 588 TVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 588 ~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+++.++.+|...|++|+|+|++.+|+||+.|++|+|||++++.++..+..+.. ...+.+++|+|+
T Consensus 231 ~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~---~~~~~~~~~s~~ 295 (354)
T 2pbi_B 231 QCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESI---IFGASSVDFSLS 295 (354)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTC---CSCEEEEEECTT
T ss_pred cEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCc---ccceeEEEEeCC
Confidence 99999999999999999999999999999999999999999988877754432 223567788774
No 13
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.80 E-value=3.5e-18 Score=180.56 Aligned_cols=105 Identities=20% Similarity=0.250 Sum_probs=93.6
Q ss_pred eeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEeccc--CCCEEEEEEcCCCCEEEEEeCCCcEEE
Q 006229 546 TEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEH--TQWITDVRFSPSLSRLATSSADRTVRV 623 (655)
Q Consensus 546 ~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH--~~~ItsVafsPdg~~LaSgS~DgtVrV 623 (655)
.++..+.+|...|.+++|+|++.+|++|+.|++|+|||+++.+.+..+..+ ...|++++|+|++.+|++|+.|++|+|
T Consensus 231 ~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~v 310 (354)
T 2pbi_B 231 QCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINV 310 (354)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred cEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEE
Confidence 467778899999999999999999999999999999999999888777644 457999999999999999999999999
Q ss_pred EECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 624 WDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 624 WDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
||+.+++++..+.+|... |.+++|+|+
T Consensus 311 wd~~~~~~~~~l~~h~~~-----v~~l~~spd 337 (354)
T 2pbi_B 311 WDVLKGSRVSILFGHENR-----VSTLRVSPD 337 (354)
T ss_dssp EETTTCSEEEEECCCSSC-----EEEEEECTT
T ss_pred EECCCCceEEEEECCCCc-----EEEEEECCC
Confidence 999999999998887654 557888885
No 14
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.80 E-value=1.8e-18 Score=183.18 Aligned_cols=159 Identities=14% Similarity=0.146 Sum_probs=128.7
Q ss_pred ceeccCCCCceEEEEecCCCCcc------------cccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccC
Q 006229 473 TLQHNGASSKSLLMFGSDGMGSL------------TSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVG 540 (655)
Q Consensus 473 ~~~~s~S~d~s~l~ws~dg~~~l------------asss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~ 540 (655)
..+.+++.++.+.+|+.+....+ .+....+.+.+++|++|+.|++|++|+...+
T Consensus 94 ~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~-------------- 159 (344)
T 4gqb_B 94 RGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ-------------- 159 (344)
T ss_dssp TEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------------
T ss_pred CeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC--------------
Confidence 34667888999999998653211 1233456777889999999999999976544
Q ss_pred CCceeeeEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEec--ccCCCEEEEEEcCC-CCEEEEEe
Q 006229 541 KGFTFTEFQLIPASTSKVESCHFSPDGK-LLATGGHDKKAVLWCTESFTVKSTLE--EHTQWITDVRFSPS-LSRLATSS 616 (655)
Q Consensus 541 ~~~t~~~v~~l~gH~~~V~sl~fSpdG~-lLaSgs~DgtVrIWDl~t~~~l~tl~--gH~~~ItsVafsPd-g~~LaSgS 616 (655)
+++..+.+|.+.|++++|++++. +|++|+.|++|+|||+++++++..+. .|...|++++|+|+ +.+|++|+
T Consensus 160 -----~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~ 234 (344)
T 4gqb_B 160 -----VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGD 234 (344)
T ss_dssp -----EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEE
T ss_pred -----cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEec
Confidence 57788999999999999999875 89999999999999999999888874 56678999999995 57899999
Q ss_pred CCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 617 ADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 617 ~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
.|++|+|||+++++++.++.+|... |.+++|+|+
T Consensus 235 ~dg~v~~wd~~~~~~~~~~~~h~~~-----v~~v~fsp~ 268 (344)
T 4gqb_B 235 ENGTVSLVDTKSTSCVLSSAVHSQC-----VTGLVFSPH 268 (344)
T ss_dssp TTSEEEEEESCC--CCEEEECCSSC-----EEEEEECSS
T ss_pred cCCcEEEEECCCCcEEEEEcCCCCC-----EEEEEEccC
Confidence 9999999999999999999988764 457788874
No 15
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.79 E-value=2.9e-18 Score=178.05 Aligned_cols=122 Identities=17% Similarity=0.222 Sum_probs=106.7
Q ss_pred cEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 006229 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES 586 (655)
Q Consensus 507 ~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t 586 (655)
.+|++|+.|++|++|+.... ......++..+.+|...|.+|+|+|+|++|++|+.|++|+|||+.+
T Consensus 31 ~~l~s~s~D~~v~~W~~~~~--------------~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~ 96 (319)
T 3frx_A 31 NLLLSASRDKTLISWKLTGD--------------DQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVAT 96 (319)
T ss_dssp TEEEEEETTSEEEEEEEEEE--------------TTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred cEEEEecCCccEEEecCCCC--------------CccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 68999999999999965322 1112346778899999999999999999999999999999999999
Q ss_pred CeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceee
Q 006229 587 FTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFV 643 (655)
Q Consensus 587 ~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~ 643 (655)
++++..+.+|...|++|+|+|++.+|+||+.|++|+|||++ +.++..+.+|...+.
T Consensus 97 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~ 152 (319)
T 3frx_A 97 GETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVS 152 (319)
T ss_dssp TEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEE
T ss_pred CCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEE
Confidence 99999999999999999999999999999999999999997 567778877765443
No 16
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.79 E-value=1.8e-18 Score=183.28 Aligned_cols=161 Identities=17% Similarity=0.125 Sum_probs=122.2
Q ss_pred CCCceeccCCCCceEEEEecCCCCcc--------cccCcccCCCC-cEEEeccCCCcEEEEecCCCCCCCCccccccccC
Q 006229 470 SRPTLQHNGASSKSLLMFGSDGMGSL--------TSAPNQLTDMD-RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVG 540 (655)
Q Consensus 470 s~~~~~~s~S~d~s~l~ws~dg~~~l--------asss~~l~~~~-~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~ 540 (655)
++...+++++.++.+.+|+......+ .+....+...+ .++++|+.|++|++|+...+.
T Consensus 137 pdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~------------- 203 (344)
T 4gqb_B 137 SSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK------------- 203 (344)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS-------------
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccc-------------
Confidence 44567888899999999998753211 11222344433 578999999999999765541
Q ss_pred CCceeeeEEee--cCCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCC-CEEEEEe
Q 006229 541 KGFTFTEFQLI--PASTSKVESCHFSP-DGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSL-SRLATSS 616 (655)
Q Consensus 541 ~~~t~~~v~~l--~gH~~~V~sl~fSp-dG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg-~~LaSgS 616 (655)
++..+ ..|...|++++|+| ++++|++|+.|++|+|||+++++++.++.+|...|++|+|+|++ .+|+|||
T Consensus 204 ------~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs 277 (344)
T 4gqb_B 204 ------PASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLS 277 (344)
T ss_dssp ------CEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEE
T ss_pred ------eeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEe
Confidence 22222 34566799999999 56799999999999999999999999999999999999999998 5799999
Q ss_pred CCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 617 ADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 617 ~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
.|++|+|||+++++++. +.+|.. .|.+++|+|+
T Consensus 278 ~D~~i~vwd~~~~~~~~-~~~H~~-----~V~~v~~sp~ 310 (344)
T 4gqb_B 278 EDCSLAVLDSSLSELFR-SQAHRD-----FVRDATWSPL 310 (344)
T ss_dssp TTSCEEEECTTCCEEEE-ECCCSS-----CEEEEEECSS
T ss_pred CCCeEEEEECCCCcEEE-EcCCCC-----CEEEEEEeCC
Confidence 99999999999988664 556654 3567888885
No 17
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.79 E-value=4e-18 Score=178.37 Aligned_cols=158 Identities=16% Similarity=0.141 Sum_probs=130.3
Q ss_pred eeccCCCCceEEEEecCCCCc--------ccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCcee
Q 006229 474 LQHNGASSKSLLMFGSDGMGS--------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTF 545 (655)
Q Consensus 474 ~~~s~S~d~s~l~ws~dg~~~--------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~ 545 (655)
.+.+++.++.+.+|+...... -.+....+.+.+.++++|+.|++|++|+...+
T Consensus 156 ~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~------------------- 216 (340)
T 1got_B 156 QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG------------------- 216 (340)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-------------------
T ss_pred cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-------------------
Confidence 356677889999998765211 11223355667789999999999999976544
Q ss_pred eeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEec--ccCCCEEEEEEcCCCCEEEEEeCCCcEEE
Q 006229 546 TEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLE--EHTQWITDVRFSPSLSRLATSSADRTVRV 623 (655)
Q Consensus 546 ~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~--gH~~~ItsVafsPdg~~LaSgS~DgtVrV 623 (655)
.++..+.+|...|.+++|+|++++|++|+.|++|+|||+++++.+..+. .+...|++|+|+|++.+|++|+.|++|+|
T Consensus 217 ~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~v 296 (340)
T 1got_B 217 MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNV 296 (340)
T ss_dssp SEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred eeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEE
Confidence 4567788999999999999999999999999999999999998887775 33457999999999999999999999999
Q ss_pred EECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 624 WDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 624 WDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
||+.++.++..+.+|... |.+++|+|+
T Consensus 297 wd~~~~~~~~~~~~h~~~-----v~~~~~s~d 323 (340)
T 1got_B 297 WDALKADRAGVLAGHDNR-----VSCLGVTDD 323 (340)
T ss_dssp EETTTCCEEEEEECCSSC-----EEEEEECTT
T ss_pred EEcccCcEeeEeecCCCc-----EEEEEEcCC
Confidence 999999999999888765 456777775
No 18
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.79 E-value=4.5e-18 Score=174.19 Aligned_cols=163 Identities=18% Similarity=0.281 Sum_probs=133.9
Q ss_pred CCCceeccCCCCceEEEEecCCCCc--------ccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCC
Q 006229 470 SRPTLQHNGASSKSLLMFGSDGMGS--------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGK 541 (655)
Q Consensus 470 s~~~~~~s~S~d~s~l~ws~dg~~~--------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~ 541 (655)
++...+.+++.++.+.+|+...... ..+....+.+.+.+|++|+.|++|++|+...+
T Consensus 33 ~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~--------------- 97 (312)
T 4ery_A 33 PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG--------------- 97 (312)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC---------------
T ss_pred CCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCC---------------
Confidence 4456778888889999998754211 12223355667789999999999999966543
Q ss_pred CceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcE
Q 006229 542 GFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTV 621 (655)
Q Consensus 542 ~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtV 621 (655)
.++..+.+|...|.+++|+|++++|++|+.|++|+|||+++++++..+.+|...|++++|+|++.+|++++.|++|
T Consensus 98 ----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (312)
T 4ery_A 98 ----KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 173 (312)
T ss_dssp ----CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ----cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence 4567788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 622 RVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 622 rVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+|||+++++++..+..... ..+..++|+|+
T Consensus 174 ~~wd~~~~~~~~~~~~~~~----~~~~~~~~~~~ 203 (312)
T 4ery_A 174 RIWDTASGQCLKTLIDDDN----PPVSFVKFSPN 203 (312)
T ss_dssp EEEETTTCCEEEEECCSSC----CCEEEEEECTT
T ss_pred EEEECCCCceeeEEeccCC----CceEEEEECCC
Confidence 9999999998877754332 23456777774
No 19
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.79 E-value=2.6e-18 Score=182.76 Aligned_cols=131 Identities=18% Similarity=0.170 Sum_probs=103.6
Q ss_pred CcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 006229 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTE 585 (655)
Q Consensus 506 ~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~ 585 (655)
..++++|+.|++|++|+.... ...+..+.+|.+.|.+|+|+|++++|++|+.|++|+|||++
T Consensus 218 ~~~l~sgs~D~~v~~wd~~~~------------------~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~ 279 (380)
T 3iz6_a 218 ANMFISGSCDTTVRLWDLRIT------------------SRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMR 279 (380)
T ss_dssp CCEEEEEETTSCEEEEETTTT------------------CCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETT
T ss_pred CCEEEEEECCCeEEEEECCCC------------------CcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECC
Confidence 355666666666666644321 13566788999999999999999999999999999999999
Q ss_pred CCeEEEEecccCC-------CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 586 SFTVKSTLEEHTQ-------WITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 586 t~~~l~tl~gH~~-------~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+++++..+..|.. .|++|+|+|+|++|++|+.||.|+|||+.+++++..+..... .+...|.+++|+|+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~-~h~~~v~~l~~s~d 355 (380)
T 3iz6_a 280 TGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQN-SHEGRISCLGLSSD 355 (380)
T ss_dssp TTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCS-SCCCCCCEEEECSS
T ss_pred CCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccC-CCCCceEEEEECCC
Confidence 9999988876543 489999999999999999999999999999998887732111 12334678888885
No 20
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.79 E-value=5.7e-18 Score=173.44 Aligned_cols=126 Identities=20% Similarity=0.325 Sum_probs=112.5
Q ss_pred CcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 006229 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTE 585 (655)
Q Consensus 506 ~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~ 585 (655)
+.+|++|+.|+.|++|+..++ +.+..+.+|...|.+++|+|++++|++|+.|++|+|||++
T Consensus 35 ~~~l~s~~~dg~i~iw~~~~~-------------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~ 95 (312)
T 4ery_A 35 GEWLASSSADKLIKIWGAYDG-------------------KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS 95 (312)
T ss_dssp SSEEEEEETTSCEEEEETTTC-------------------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCEEEEeeCCCeEEEEeCCCc-------------------ccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECC
Confidence 358899999999999965443 3556778999999999999999999999999999999999
Q ss_pred CCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 586 SFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 586 t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+++++.++.+|...|++++|+|++.+|++|+.|++|+|||+++++++..+..|... |.++.|+|+
T Consensus 96 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~-----v~~~~~~~~ 160 (312)
T 4ery_A 96 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP-----VSAVHFNRD 160 (312)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC-----EEEEEECTT
T ss_pred CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCc-----EEEEEEcCC
Confidence 99999999999999999999999999999999999999999999999998877654 446677664
No 21
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.79 E-value=3e-18 Score=183.18 Aligned_cols=177 Identities=18% Similarity=0.224 Sum_probs=135.6
Q ss_pred CCCCceeccCCCCceEEEEecCCCCcc--------cccCcccCCCCcEEEeccCCCcEEEEecCCCC-------------
Q 006229 469 ISRPTLQHNGASSKSLLMFGSDGMGSL--------TSAPNQLTDMDRFVDDGSLDDNVESFLSPDDA------------- 527 (655)
Q Consensus 469 ~s~~~~~~s~S~d~s~l~ws~dg~~~l--------asss~~l~~~~~~LasGS~D~tV~vW~s~d~~------------- 527 (655)
.++...+++++.++.+.+|+......+ .+....+.+.+.+|++|+.|++|++|+..++.
T Consensus 132 s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~ 211 (393)
T 1erj_A 132 SPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTT 211 (393)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEE
Confidence 345567888888999999998753211 12233556677889999999999999765532
Q ss_pred -------------CCCCccccccccCCCceeeeE----EeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCC----
Q 006229 528 -------------DPRDRVGRSAEVGKGFTFTEF----QLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES---- 586 (655)
Q Consensus 528 -------------d~~d~~~~l~d~~~~~t~~~v----~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t---- 586 (655)
...+..+++|+...+.....+ ....+|...|.+|+|+|+|++|++|+.|++|+|||+++
T Consensus 212 ~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~ 291 (393)
T 1erj_A 212 VAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNK 291 (393)
T ss_dssp EEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCc
Confidence 112445577777665333222 12268999999999999999999999999999999975
Q ss_pred --------CeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeee
Q 006229 587 --------FTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVST 645 (655)
Q Consensus 587 --------~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~ 645 (655)
+.+..++.+|...|++|+|+|++.+|+||+.|++|+|||+++++++..+.+|...+.++
T Consensus 292 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v 358 (393)
T 1erj_A 292 SDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISV 358 (393)
T ss_dssp ---------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred ccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEE
Confidence 34667888999999999999999999999999999999999999999999887765543
No 22
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.78 E-value=4.9e-18 Score=180.60 Aligned_cols=152 Identities=13% Similarity=0.127 Sum_probs=112.1
Q ss_pred ccCCCCceEEEEecCCCCc-------ccccCcccCCCCcEEEeccCCCcEEEEecCCCCCC-------------------
Q 006229 476 HNGASSKSLLMFGSDGMGS-------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADP------------------- 529 (655)
Q Consensus 476 ~s~S~d~s~l~ws~dg~~~-------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~------------------- 529 (655)
.+++.|+++.+|++..... -.+....+.+.+.++++++.| .+++|+..++...
T Consensus 151 as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fsp 229 (365)
T 4h5i_A 151 ASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIA 229 (365)
T ss_dssp EESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEE
T ss_pred EECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcC
Confidence 3556788899998875221 112334567777889888755 4555544433200
Q ss_pred -------------CCccccccccCCCce-eeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEe-c
Q 006229 530 -------------RDRVGRSAEVGKGFT-FTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTL-E 594 (655)
Q Consensus 530 -------------~d~~~~l~d~~~~~t-~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl-~ 594 (655)
....+..|+...... ......+.+|...|+||+|+|||++||+|+.|++|+|||+++++++.++ .
T Consensus 230 dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~ 309 (365)
T 4h5i_A 230 DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQ 309 (365)
T ss_dssp TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETT
T ss_pred CCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecC
Confidence 001123333333221 2234567889999999999999999999999999999999999999885 7
Q ss_pred ccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 006229 595 EHTQWITDVRFSPSLSRLATSSADRTVRVWDTEN 628 (655)
Q Consensus 595 gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~t 628 (655)
+|...|++|+|+|||++|||||.|++|||||+..
T Consensus 310 gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 310 AHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp SSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred cccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 9999999999999999999999999999999953
No 23
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.78 E-value=4.6e-18 Score=177.40 Aligned_cols=144 Identities=17% Similarity=0.274 Sum_probs=117.0
Q ss_pred CCceeccCCCCceEEEEecCCCC---------------cccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCcccc
Q 006229 471 RPTLQHNGASSKSLLMFGSDGMG---------------SLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGR 535 (655)
Q Consensus 471 ~~~~~~s~S~d~s~l~ws~dg~~---------------~lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~ 535 (655)
....+.+++.|+.+.+|+..... .-.+....+.+.+.+|++|+.|++|++|+....
T Consensus 69 ~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~--------- 139 (330)
T 2hes_X 69 HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDES--------- 139 (330)
T ss_dssp TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTT---------
T ss_pred CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCC---------
Confidence 44678888899999999874210 111223356677889999999999999976432
Q ss_pred ccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCC--eEEEEecccCCCEEEEEEcCC--CCE
Q 006229 536 SAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESF--TVKSTLEEHTQWITDVRFSPS--LSR 611 (655)
Q Consensus 536 l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~--~~l~tl~gH~~~ItsVafsPd--g~~ 611 (655)
+....++..+.+|...|.+|+|+|++.+|++|+.|++|+|||+.++ +++.++.+|...|++++|+|+ +.+
T Consensus 140 ------~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 213 (330)
T 2hes_X 140 ------GEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFR 213 (330)
T ss_dssp ------CCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCE
T ss_pred ------CCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeE
Confidence 1123567788899999999999999999999999999999999776 688899999999999999998 779
Q ss_pred EEEEeCCCcEEEEECCCC
Q 006229 612 LATSSADRTVRVWDTENV 629 (655)
Q Consensus 612 LaSgS~DgtVrVWDl~tg 629 (655)
|+||+.|++|+|||++++
T Consensus 214 l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 214 LCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp EEEEETTSCEEEEEEEEE
T ss_pred EEEEeCCCeEEEEEecCC
Confidence 999999999999999754
No 24
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.77 E-value=3.5e-18 Score=196.10 Aligned_cols=177 Identities=21% Similarity=0.271 Sum_probs=133.5
Q ss_pred ceeccCCCCceEEEEecCCCCc-------------ccccCcccCCCCcEEEeccCCCcEEEEecCCCC------------
Q 006229 473 TLQHNGASSKSLLMFGSDGMGS-------------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDA------------ 527 (655)
Q Consensus 473 ~~~~s~S~d~s~l~ws~dg~~~-------------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~------------ 527 (655)
.++.+++.|+++.+|+...... ..+....+.+.+++|++|+.|++|++|+...+.
T Consensus 396 ~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v 475 (694)
T 3dm0_A 396 DIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDV 475 (694)
T ss_dssp SEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred CEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCE
Confidence 4677778888888887653211 112233456666788888888888888765442
Q ss_pred --------------CCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCC--CEEEEEeCCCcEEEEeCCCCeEEE
Q 006229 528 --------------DPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDG--KLLATGGHDKKAVLWCTESFTVKS 591 (655)
Q Consensus 528 --------------d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG--~lLaSgs~DgtVrIWDl~t~~~l~ 591 (655)
.+.+..+++|+..............+|...|.|++|+|++ .+|++|+.|++|+|||+++++++.
T Consensus 476 ~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~ 555 (694)
T 3dm0_A 476 LSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRS 555 (694)
T ss_dssp EEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEE
T ss_pred EEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEE
Confidence 1234445666654432222222335799999999999987 589999999999999999999999
Q ss_pred EecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 592 TLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 592 tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
++.+|...|++|+|+|++++|+||+.|++|+|||+++++++..+..+. .+.+++|+|+
T Consensus 556 ~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~------~v~~~~~sp~ 613 (694)
T 3dm0_A 556 TLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANS------VIHALCFSPN 613 (694)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSS------CEEEEEECSS
T ss_pred EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCC------cEEEEEEcCC
Confidence 999999999999999999999999999999999999999887765543 3567888875
No 25
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.77 E-value=1.2e-17 Score=189.24 Aligned_cols=180 Identities=17% Similarity=0.222 Sum_probs=134.7
Q ss_pred CCCceeccCCCCceEEEEecCCCC--------cccccCcccCCCCcEEEeccCCCcEEEEecCCCCCC------------
Q 006229 470 SRPTLQHNGASSKSLLMFGSDGMG--------SLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADP------------ 529 (655)
Q Consensus 470 s~~~~~~s~S~d~s~l~ws~dg~~--------~lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~------------ 529 (655)
++...++.++ +..+.+|+..... .-.+....+.+.+++|++|+.|++|++|+...+...
T Consensus 28 pdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v 106 (611)
T 1nr0_A 28 PAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPV 106 (611)
T ss_dssp TTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCE
T ss_pred CCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCce
Confidence 3344555544 4588889875311 112334467788899999999999999987533210
Q ss_pred ---------C-----------CccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCe
Q 006229 530 ---------R-----------DRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGK-LLATGGHDKKAVLWCTESFT 588 (655)
Q Consensus 530 ---------~-----------d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~-lLaSgs~DgtVrIWDl~t~~ 588 (655)
. ...+.+|+.. ..+..+.+|...|.+|+|+|++. +|++|+.|++|+|||..+++
T Consensus 107 ~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~-----~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~ 181 (611)
T 1nr0_A 107 KDISWDSESKRIAAVGEGRERFGHVFLFDTG-----TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK 181 (611)
T ss_dssp EEEEECTTSCEEEEEECCSSCSEEEEETTTC-----CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE
T ss_pred EEEEECCCCCEEEEEECCCCceeEEEEeeCC-----CCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe
Confidence 0 0122334321 23456789999999999999987 69999999999999999999
Q ss_pred EEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecc--cceeeeeceeeEEEecC
Q 006229 589 VKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCY--KCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 589 ~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~--~~~v~s~~Vss~~F~P~ 655 (655)
++.++.+|...|++|+|+|++++|+||+.|++|+|||+.+++++..+... ....+...|.+++|+|+
T Consensus 182 ~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spd 250 (611)
T 1nr0_A 182 FKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD 250 (611)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT
T ss_pred EeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCC
Confidence 99999999999999999999999999999999999999999998887420 00012335678889885
No 26
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.77 E-value=2.2e-17 Score=172.69 Aligned_cols=136 Identities=16% Similarity=0.202 Sum_probs=108.4
Q ss_pred CCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeC
Q 006229 505 MDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCT 584 (655)
Q Consensus 505 ~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl 584 (655)
.+.+|++|+.|++|++|+...... ..........+.+|...|.+|+|+|++.+|++|+.|++|+|||+
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~------------~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~ 105 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQ------------NGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDL 105 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCC------------SSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEET
T ss_pred CCCEEEEEcCCCEEEEEECCcCCc------------ccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEEC
Confidence 447899999999999997654311 11123456778999999999999999999999999999999999
Q ss_pred CCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 585 ESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 585 ~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
++++++.++.+|...|++|+|+|++++|++|+.|++|+|||+.. .+...+.. ...+...|.++.|+|+
T Consensus 106 ~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~--~~~~~~~v~~~~~~~~ 173 (343)
T 2xzm_R 106 RTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG-ECKFSSAE--KENHSDWVSCVRYSPI 173 (343)
T ss_dssp TSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS-CEEEECCT--TTSCSSCEEEEEECCC
T ss_pred CCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC-Cceeeeec--ccCCCceeeeeeeccc
Confidence 99999999999999999999999999999999999999999984 33333321 0112233556667663
No 27
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.76 E-value=1.6e-18 Score=181.40 Aligned_cols=179 Identities=20% Similarity=0.181 Sum_probs=125.4
Q ss_pred CCceeccCCCCceEEEEecCCCC--c--------ccccCcccCCCCcEEEeccCCCcEEEEecCCCC-------------
Q 006229 471 RPTLQHNGASSKSLLMFGSDGMG--S--------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDA------------- 527 (655)
Q Consensus 471 ~~~~~~s~S~d~s~l~ws~dg~~--~--------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~------------- 527 (655)
+...+++++.++.+.+|+..... . -.+....+.+.+.+|++|+.|++|++|+...+.
T Consensus 22 ~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~ 101 (377)
T 3dwl_C 22 QRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNR 101 (377)
T ss_dssp SSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSS
T ss_pred CCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCC
Confidence 33456666667777777766431 1 011222445556778888888888888655432
Q ss_pred ----------------CCCCccccccccCCCceeeeEEeecC-CCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCC-----
Q 006229 528 ----------------DPRDRVGRSAEVGKGFTFTEFQLIPA-STSKVESCHFSPDGKLLATGGHDKKAVLWCTE----- 585 (655)
Q Consensus 528 ----------------d~~d~~~~l~d~~~~~t~~~v~~l~g-H~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~----- 585 (655)
...+..+++|+......+..+..+.+ |...|.+++|+|++++|++|+.|++|+|||++
T Consensus 102 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 181 (377)
T 3dwl_C 102 AATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVD 181 (377)
T ss_dssp CEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC
T ss_pred ceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccC
Confidence 01133345666655543345667777 99999999999999999999999999999985
Q ss_pred -------------CCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeE----EEEEecccceeeeecee
Q 006229 586 -------------SFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRK----LTFICCYKCIFVSTAIG 648 (655)
Q Consensus 586 -------------t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~----v~~l~~~~~~v~s~~Vs 648 (655)
.++++..+ +|...|++++|+|++++|++++.|++|+|||++++++ +..+..|... |.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-----v~ 255 (377)
T 3dwl_C 182 AKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLP-----LR 255 (377)
T ss_dssp -CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSC-----EE
T ss_pred CCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCc-----eE
Confidence 46677788 9999999999999999999999999999999999887 6777776554 45
Q ss_pred eEEEecC
Q 006229 649 SCFFAPT 655 (655)
Q Consensus 649 s~~F~P~ 655 (655)
+++|+|+
T Consensus 256 ~~~~s~~ 262 (377)
T 3dwl_C 256 SLLWANE 262 (377)
T ss_dssp EEEEEET
T ss_pred EEEEcCC
Confidence 6777774
No 28
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.76 E-value=1.2e-17 Score=171.48 Aligned_cols=164 Identities=15% Similarity=0.235 Sum_probs=126.4
Q ss_pred CCCceeccCCCCceEEEEecCCCC-cc---------cccCcccCC--CCcEEEeccCCCcEEEEecCCCCCCCCcccccc
Q 006229 470 SRPTLQHNGASSKSLLMFGSDGMG-SL---------TSAPNQLTD--MDRFVDDGSLDDNVESFLSPDDADPRDRVGRSA 537 (655)
Q Consensus 470 s~~~~~~s~S~d~s~l~ws~dg~~-~l---------asss~~l~~--~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~ 537 (655)
++...+++++.|+.+.+|+.++.. .. .+....+.. .+.+|++|+.|++|++|+...+.
T Consensus 19 ~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~---------- 88 (297)
T 2pm7_B 19 YYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGR---------- 88 (297)
T ss_dssp TTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSC----------
T ss_pred CCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCc----------
Confidence 445688889999999999986421 11 111123322 25789999999999999765431
Q ss_pred ccCCCceeeeEEeecCCCCCeeEEEEcCC--CCEEEEEeCCCcEEEEeCCCCe--EEEEecccCCCEEEEEEcCC-----
Q 006229 538 EVGKGFTFTEFQLIPASTSKVESCHFSPD--GKLLATGGHDKKAVLWCTESFT--VKSTLEEHTQWITDVRFSPS----- 608 (655)
Q Consensus 538 d~~~~~t~~~v~~l~gH~~~V~sl~fSpd--G~lLaSgs~DgtVrIWDl~t~~--~l~tl~gH~~~ItsVafsPd----- 608 (655)
...+..+.+|...|.+|+|+|+ |.+|++|+.|++|+|||+++.. ....+.+|...|++++|+|+
T Consensus 89 -------~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 89 -------WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp -------BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC----
T ss_pred -------eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccc
Confidence 1234556789999999999997 8999999999999999998763 24577899999999999997
Q ss_pred --------CCEEEEEeCCCcEEEEECCCCe----EEEEEecccceeeeeceeeEEEecC
Q 006229 609 --------LSRLATSSADRTVRVWDTENVR----KLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 609 --------g~~LaSgS~DgtVrVWDl~tg~----~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+++|+||+.|++|+|||++++. ++..+.+|... |.+++|+|+
T Consensus 162 ~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~-----V~~v~~sp~ 215 (297)
T 2pm7_B 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW-----VRDVAWSPT 215 (297)
T ss_dssp --------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC-----EEEEEECCC
T ss_pred ccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCc-----eEEEEECCC
Confidence 5799999999999999998765 56677777654 557788874
No 29
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.76 E-value=8.3e-18 Score=178.26 Aligned_cols=149 Identities=15% Similarity=0.159 Sum_probs=125.6
Q ss_pred CCceeccCCCCceEEEEecCCCCc-------ccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCc
Q 006229 471 RPTLQHNGASSKSLLMFGSDGMGS-------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGF 543 (655)
Q Consensus 471 ~~~~~~s~S~d~s~l~ws~dg~~~-------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~ 543 (655)
+...+.+++.++.+.+|+...... -......+...+++|++|+.|+.|++|+...+
T Consensus 67 ~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----------------- 129 (420)
T 3vl1_A 67 VGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN----------------- 129 (420)
T ss_dssp EETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSC-----------------
T ss_pred cCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCc-----------------
Confidence 345677777889999999875211 11112234566788999999999999954332
Q ss_pred eeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEE
Q 006229 544 TFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRV 623 (655)
Q Consensus 544 t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrV 623 (655)
..+..+.+|...|++++|+|++++|++|+.|++|+|||+++++++.++.+|...|++|+|+|++.+|++++.|++|+|
T Consensus 130 --~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~i 207 (420)
T 3vl1_A 130 --LQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRL 207 (420)
T ss_dssp --EEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred --ceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 456667899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCeEEEEEecc
Q 006229 624 WDTENVRKLTFICCY 638 (655)
Q Consensus 624 WDl~tg~~v~~l~~~ 638 (655)
||+++++++..+..+
T Consensus 208 wd~~~~~~~~~~~~~ 222 (420)
T 3vl1_A 208 WECGTGTTIHTFNRK 222 (420)
T ss_dssp EETTTTEEEEEECBT
T ss_pred eECCCCceeEEeecC
Confidence 999999999998764
No 30
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.76 E-value=1.5e-17 Score=184.11 Aligned_cols=159 Identities=23% Similarity=0.345 Sum_probs=129.7
Q ss_pred CCCceeccCCCCceEEEEecCCCCc-------ccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCC
Q 006229 470 SRPTLQHNGASSKSLLMFGSDGMGS-------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKG 542 (655)
Q Consensus 470 s~~~~~~s~S~d~s~l~ws~dg~~~-------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~ 542 (655)
++...+.+++.++.+.+|+..+... -.+....+.+.+.+|++++.|++|++|+.. +
T Consensus 395 ~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~---------------- 457 (577)
T 2ymu_A 395 PDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-G---------------- 457 (577)
T ss_dssp TTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-S----------------
T ss_pred CCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-C----------------
Confidence 3445667777888888888765311 112223556677889999999999999531 1
Q ss_pred ceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEE
Q 006229 543 FTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVR 622 (655)
Q Consensus 543 ~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVr 622 (655)
+.+..+.+|...|.+++|+||+++|++++.|++|+|||. +++++.++.+|...|++|+|+|++++|||++.|++|+
T Consensus 458 ---~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~ 533 (577)
T 2ymu_A 458 ---QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVK 533 (577)
T ss_dssp ---CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred ---CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEE
Confidence 356678899999999999999999999999999999995 6789999999999999999999999999999999999
Q ss_pred EEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 623 VWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 623 VWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
|||+ +++++..+.+|... |.+++|+||
T Consensus 534 lwd~-~~~~~~~~~~h~~~-----v~~~~fs~d 560 (577)
T 2ymu_A 534 LWNR-NGQLLQTLTGHSSS-----VWGVAFSPD 560 (577)
T ss_dssp EECT-TSCEEEEEECCSSC-----EEEEEECTT
T ss_pred EEeC-CCCEEEEEcCCCCC-----EEEEEEcCC
Confidence 9996 68899999888654 457888885
No 31
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.76 E-value=2.9e-17 Score=171.83 Aligned_cols=159 Identities=19% Similarity=0.330 Sum_probs=126.7
Q ss_pred CCceeccCCCCceEEEEecCCCC---------------cccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCcccc
Q 006229 471 RPTLQHNGASSKSLLMFGSDGMG---------------SLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGR 535 (655)
Q Consensus 471 ~~~~~~s~S~d~s~l~ws~dg~~---------------~lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~ 535 (655)
+..++++++.|+++.+|+..... ...+....+.+.+.++++|+.|++|++|+..++
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~--------- 108 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTG--------- 108 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSS---------
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC---------
Confidence 34678899999999999875321 011223345666789999999999999976544
Q ss_pred ccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEec---ccCCCEEEEEEcCCC---
Q 006229 536 SAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLE---EHTQWITDVRFSPSL--- 609 (655)
Q Consensus 536 l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~---gH~~~ItsVafsPdg--- 609 (655)
..+..+.+|...|.+|+|+|++++|++|+.|++|+|||+... +...+. +|...|++++|+|++
T Consensus 109 ----------~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~ 177 (343)
T 2xzm_R 109 ----------TTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYSPIMKSA 177 (343)
T ss_dssp ----------CEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEECCCCCSC
T ss_pred ----------cEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeeeeccccccc
Confidence 456778899999999999999999999999999999999843 443443 799999999999987
Q ss_pred -------CEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 610 -------SRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 610 -------~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
.+|++++.|++|+|||. +..+...+..|... |.+++|+|+
T Consensus 178 ~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~-----v~~~~~s~~ 224 (343)
T 2xzm_R 178 NKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESN-----VNHLSISPN 224 (343)
T ss_dssp SCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSC-----EEEEEECTT
T ss_pred cccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCcccc-----ceEEEECCC
Confidence 79999999999999994 56777778777654 557788875
No 32
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.76 E-value=2.1e-17 Score=173.47 Aligned_cols=128 Identities=21% Similarity=0.337 Sum_probs=104.9
Q ss_pred cEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 006229 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES 586 (655)
Q Consensus 507 ~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t 586 (655)
.+|++|+.|++|++|+...+. .........+|...|.+|+|+|+|++|++|+.|++|+|||+.+
T Consensus 29 ~~las~~~D~~i~iw~~~~~~----------------~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~ 92 (345)
T 3fm0_A 29 TLLASCGGDRRIRIWGTEGDS----------------WICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQ 92 (345)
T ss_dssp SCEEEEETTSCEEEEEEETTE----------------EEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECC
T ss_pred CEEEEEcCCCeEEEEEcCCCc----------------ceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccC
Confidence 488999999999999654330 0111223468999999999999999999999999999999987
Q ss_pred C--eEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC---eEEEEEecccceeeeeceeeEEEecC
Q 006229 587 F--TVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENV---RKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 587 ~--~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg---~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+ +++.++.+|...|++|+|+|++++|+||+.|++|+|||++++ .++..+..|... |.+++|+|+
T Consensus 93 ~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~-----v~~~~~~p~ 161 (345)
T 3fm0_A 93 DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQD-----VKHVVWHPS 161 (345)
T ss_dssp C-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSC-----EEEEEECSS
T ss_pred CCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCC-----eEEEEECCC
Confidence 6 568899999999999999999999999999999999999876 455666666543 557788875
No 33
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.76 E-value=2e-17 Score=187.54 Aligned_cols=111 Identities=28% Similarity=0.430 Sum_probs=101.1
Q ss_pred EEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q 006229 508 FVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESF 587 (655)
Q Consensus 508 ~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~ 587 (655)
.|++|+.|++|++|+... .+++..+.+|...|.+|+|+|||++|++|+.|++|+|||+.++
T Consensus 162 ~l~s~s~D~~v~lwd~~~-------------------~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g 222 (611)
T 1nr0_A 162 RIISGSDDNTVAIFEGPP-------------------FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG 222 (611)
T ss_dssp EEEEEETTSCEEEEETTT-------------------BEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred EEEEEeCCCeEEEEECCC-------------------CeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCC
Confidence 589999999999995322 2566788999999999999999999999999999999999999
Q ss_pred eEEEEec-------ccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEec
Q 006229 588 TVKSTLE-------EHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICC 637 (655)
Q Consensus 588 ~~l~tl~-------gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~ 637 (655)
+++.++. +|.+.|++|+|+|++++|+|++.|++|+|||+++++++.++..
T Consensus 223 ~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~ 279 (611)
T 1nr0_A 223 TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPV 279 (611)
T ss_dssp CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred cEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecC
Confidence 9998884 8999999999999999999999999999999999998877753
No 34
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.76 E-value=6.5e-18 Score=178.89 Aligned_cols=173 Identities=18% Similarity=0.065 Sum_probs=125.6
Q ss_pred eccCCCCceEEEEecCCCCc------------ccccCcccCCCCcEEEeccCCCcEEEEecCCCC---------------
Q 006229 475 QHNGASSKSLLMFGSDGMGS------------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDA--------------- 527 (655)
Q Consensus 475 ~~s~S~d~s~l~ws~dg~~~------------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~--------------- 527 (655)
+.+++.++++.+|+...... -.+....+.+.+++|++|+.|++|++|+...+.
T Consensus 108 ~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v 187 (357)
T 4g56_B 108 ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCV 187 (357)
T ss_dssp EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEE
Confidence 33456677888887654211 112233456667888999999999999765543
Q ss_pred ------------CCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeEEEEec
Q 006229 528 ------------DPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPD-GKLLATGGHDKKAVLWCTESFTVKSTLE 594 (655)
Q Consensus 528 ------------d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpd-G~lLaSgs~DgtVrIWDl~t~~~l~tl~ 594 (655)
.+.+..+++|++.++..... ..+..|...|++|+|+|+ +.+|++|+.|++|+|||+++++++.++.
T Consensus 188 ~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~-~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~ 266 (357)
T 4g56_B 188 AACPGKDTIFLSCGEDGRILLWDTRKPKPATR-IDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA 266 (357)
T ss_dssp EECTTCSSCEEEEETTSCEEECCTTSSSCBCB-CCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC
T ss_pred EEccCCCceeeeeccCCceEEEECCCCceeee-eeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEe
Confidence 11233446666655432221 233457778999999996 5699999999999999999999999999
Q ss_pred ccCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEec
Q 006229 595 EHTQWITDVRFSPSL-SRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAP 654 (655)
Q Consensus 595 gH~~~ItsVafsPdg-~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P 654 (655)
+|...|++|+|+|++ ++|+|||.|++|+|||+++++++..+ +|.. .|.+++|+|
T Consensus 267 ~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~-----~V~~vafsP 321 (357)
T 4g56_B 267 VHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRD-----FVTGVAWSP 321 (357)
T ss_dssp CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSS-----CEEEEEECS
T ss_pred ccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCC-----CEEEEEEeC
Confidence 999999999999987 57999999999999999999888665 4543 456788988
No 35
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.75 E-value=1.2e-17 Score=171.48 Aligned_cols=165 Identities=21% Similarity=0.313 Sum_probs=122.5
Q ss_pred CceeccCCCCceEEEEecCCCC--cc--------cccCcccCCC--CcEEEeccCCCcEEEEecCCCCCCCCcccccccc
Q 006229 472 PTLQHNGASSKSLLMFGSDGMG--SL--------TSAPNQLTDM--DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEV 539 (655)
Q Consensus 472 ~~~~~s~S~d~s~l~ws~dg~~--~l--------asss~~l~~~--~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~ 539 (655)
...+++++.|+++.+|+..... .+ .+....+.+. +.+|++|+.|++|++|+......
T Consensus 67 g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~----------- 135 (297)
T 2pm7_B 67 GTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT----------- 135 (297)
T ss_dssp CSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC-----------
T ss_pred CCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc-----------
Confidence 3578889999999999986421 10 1122233443 57899999999999997654310
Q ss_pred CCCceeeeEEeecCCCCCeeEEEEcCC-------------CCEEEEEeCCCcEEEEeCCCCe----EEEEecccCCCEEE
Q 006229 540 GKGFTFTEFQLIPASTSKVESCHFSPD-------------GKLLATGGHDKKAVLWCTESFT----VKSTLEEHTQWITD 602 (655)
Q Consensus 540 ~~~~t~~~v~~l~gH~~~V~sl~fSpd-------------G~lLaSgs~DgtVrIWDl~t~~----~l~tl~gH~~~Its 602 (655)
.....+.+|...|.+++|+|+ +++|++|+.|++|+|||+++++ ++.++.+|...|++
T Consensus 136 ------~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~ 209 (297)
T 2pm7_B 136 ------TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRD 209 (297)
T ss_dssp ------BCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEE
T ss_pred ------eeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEE
Confidence 012356789999999999997 5799999999999999998765 67789999999999
Q ss_pred EEEcCCC---CEEEEEeCCCcEEEEECCCCe--EEEEEecccceeeeeceeeEEEecC
Q 006229 603 VRFSPSL---SRLATSSADRTVRVWDTENVR--KLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 603 VafsPdg---~~LaSgS~DgtVrVWDl~tg~--~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
|+|+|++ .+|+|||.|++|+|||++++. ....+... ..+...|.+++|+|+
T Consensus 210 v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~ 265 (297)
T 2pm7_B 210 VAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKE--EKFPDVLWRASWSLS 265 (297)
T ss_dssp EEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSS--SCCSSCEEEEEECSS
T ss_pred EEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeec--ccCCCcEEEEEECCC
Confidence 9999985 899999999999999998743 11111110 112345678889885
No 36
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.75 E-value=3.9e-17 Score=173.77 Aligned_cols=166 Identities=18% Similarity=0.174 Sum_probs=130.7
Q ss_pred eeccCCCCceEEEEecCCCCcc------------cccCcccCC-CCcEEEeccCCCcEEEEecCCCCCCCCccccccccC
Q 006229 474 LQHNGASSKSLLMFGSDGMGSL------------TSAPNQLTD-MDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVG 540 (655)
Q Consensus 474 ~~~s~S~d~s~l~ws~dg~~~l------------asss~~l~~-~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~ 540 (655)
++.+++.++.+.+|+.+..+.. .+....+.+ .+.+|++|+.|++|++|+..++....
T Consensus 49 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~---------- 118 (402)
T 2aq5_A 49 LICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL---------- 118 (402)
T ss_dssp EEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS----------
T ss_pred EEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc----------
Confidence 4445677888888987553221 122234455 66899999999999999776552110
Q ss_pred CCceeeeEEeecCCCCCeeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCeEEEEe--cccCCCEEEEEEcCCCCEEEEEeC
Q 006229 541 KGFTFTEFQLIPASTSKVESCHFSPDG-KLLATGGHDKKAVLWCTESFTVKSTL--EEHTQWITDVRFSPSLSRLATSSA 617 (655)
Q Consensus 541 ~~~t~~~v~~l~gH~~~V~sl~fSpdG-~lLaSgs~DgtVrIWDl~t~~~l~tl--~gH~~~ItsVafsPdg~~LaSgS~ 617 (655)
.....+..+.+|...|.+|+|+|++ .+|++|+.|++|+|||+++++++.++ .+|...|++|+|+|++.+|++++.
T Consensus 119 --~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 196 (402)
T 2aq5_A 119 --PLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR 196 (402)
T ss_dssp --CBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET
T ss_pred --ccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEec
Confidence 0113456778999999999999998 69999999999999999999999999 899999999999999999999999
Q ss_pred CCcEEEEECCCCeEEEEE-ecccceeeeeceeeEEEecC
Q 006229 618 DRTVRVWDTENVRKLTFI-CCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 618 DgtVrVWDl~tg~~v~~l-~~~~~~v~s~~Vss~~F~P~ 655 (655)
|++|+|||+++++++..+ ..|... .+.++.|+|+
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 231 (402)
T 2aq5_A 197 DKRVRVIEPRKGTVVAEKDRPHEGT----RPVHAVFVSE 231 (402)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCSS----SCCEEEECST
T ss_pred CCcEEEEeCCCCceeeeeccCCCCC----cceEEEEcCC
Confidence 999999999999999888 555432 2446677764
No 37
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.75 E-value=6.5e-17 Score=172.77 Aligned_cols=137 Identities=20% Similarity=0.272 Sum_probs=113.4
Q ss_pred CcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCc
Q 006229 499 PNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKK 578 (655)
Q Consensus 499 s~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~Dgt 578 (655)
...+.+.+++|++|+.|++|++|+...+ +.+..+.+|...|.+++|+|++.+|++|+.|++
T Consensus 128 ~v~~s~dg~~l~s~~~d~~i~iwd~~~~-------------------~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~ 188 (393)
T 1erj_A 128 SVCFSPDGKFLATGAEDRLIRIWDIENR-------------------KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT 188 (393)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTT-------------------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCC-------------------cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCc
Confidence 3355667789999999999999965443 466778899999999999999999999999999
Q ss_pred EEEEeCCCCeEEEEecccCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeEEEEEecccc--eeeeeceeeEEEecC
Q 006229 579 AVLWCTESFTVKSTLEEHTQWITDVRFSP-SLSRLATSSADRTVRVWDTENVRKLTFICCYKC--IFVSTAIGSCFFAPT 655 (655)
Q Consensus 579 VrIWDl~t~~~l~tl~gH~~~ItsVafsP-dg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~--~v~s~~Vss~~F~P~ 655 (655)
|+|||++++++..++. |...|++++|+| ++.+|++|+.|++|+|||++++.++..+..... ..+...|.+++|+|+
T Consensus 189 v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~ 267 (393)
T 1erj_A 189 VRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD 267 (393)
T ss_dssp EEEEETTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT
T ss_pred EEEEECCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCC
Confidence 9999999999988876 677899999999 899999999999999999999998877732211 122345677888875
No 38
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.74 E-value=1e-16 Score=163.92 Aligned_cols=176 Identities=18% Similarity=0.249 Sum_probs=138.3
Q ss_pred CceeccCCCCceEEEEecCCCCc-------------ccccCcccCCCCcEEEeccCCCcEEEEecCCCC-----------
Q 006229 472 PTLQHNGASSKSLLMFGSDGMGS-------------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDA----------- 527 (655)
Q Consensus 472 ~~~~~s~S~d~s~l~ws~dg~~~-------------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~----------- 527 (655)
+.++++++.|+++.+|+...... -.+....+.+.+.+|++|+.|+.|++|......
T Consensus 51 ~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~ 130 (340)
T 4aow_A 51 PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD 130 (340)
T ss_dssp TTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred CCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCc
Confidence 35788899999999999764211 122333556777899999999999999765543
Q ss_pred ---------------CCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCC--CEEEEEeCCCcEEEEeCCCCeEE
Q 006229 528 ---------------DPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDG--KLLATGGHDKKAVLWCTESFTVK 590 (655)
Q Consensus 528 ---------------d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG--~lLaSgs~DgtVrIWDl~t~~~l 590 (655)
...+..+++|+.... ......+.+|...|.+++|++++ .++++++.|++|++||+++++++
T Consensus 131 ~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~ 208 (340)
T 4aow_A 131 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGV--CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLK 208 (340)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTTSC--EEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEE
T ss_pred eeEEEEeecCccceeecCCCeEEEEEeCCC--ceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCcee
Confidence 112344456655443 23344567899999999999864 58899999999999999999999
Q ss_pred EEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 591 STLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 591 ~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
..+.+|...|++|+|+|++++|++|+.|++|+|||+++++++..+..+.. +.++.|+|+
T Consensus 209 ~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~------v~~~~~~~~ 267 (340)
T 4aow_A 209 TNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI------INALCFSPN 267 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSC------EEEEEECSS
T ss_pred eEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCce------EEeeecCCC
Confidence 99999999999999999999999999999999999999999988876643 445666663
No 39
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.74 E-value=1.7e-17 Score=173.28 Aligned_cols=159 Identities=13% Similarity=0.003 Sum_probs=118.6
Q ss_pred eccCCCCceEEEEecCCCC--------c----------ccccCcccCC--CCcEEEeccCCCcEEEEecCCCCCCCCccc
Q 006229 475 QHNGASSKSLLMFGSDGMG--------S----------LTSAPNQLTD--MDRFVDDGSLDDNVESFLSPDDADPRDRVG 534 (655)
Q Consensus 475 ~~s~S~d~s~l~ws~dg~~--------~----------lasss~~l~~--~~~~LasGS~D~tV~vW~s~d~~d~~d~~~ 534 (655)
+.+++.|+.+++|+.++.. . -.+....+.+ .+.++++|+.|++|++|+...+
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~-------- 159 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDD-------- 159 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSS--------
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCC--------
Confidence 6677888899999766311 0 0122334566 6789999999999999976544
Q ss_pred cccccCCCceeeeEEee-cCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEE-EEecc-cCCCEEEEEEcCCCCE
Q 006229 535 RSAEVGKGFTFTEFQLI-PASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVK-STLEE-HTQWITDVRFSPSLSR 611 (655)
Q Consensus 535 ~l~d~~~~~t~~~v~~l-~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l-~tl~g-H~~~ItsVafsPdg~~ 611 (655)
+.+..+ ..|...|.+++|+|+|.+|++|+.|++|+|||+++++.+ .++.+ |...|++|+|+|++.+
T Consensus 160 -----------~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~ 228 (343)
T 3lrv_A 160 -----------SQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYW 228 (343)
T ss_dssp -----------CEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSE
T ss_pred -----------cEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCE
Confidence 223333 245567999999999999999999999999999999887 88888 9999999999999999
Q ss_pred EEEEeCCCcEEEEECCCCeEEEEEecccceeeeece--eeEEEecC
Q 006229 612 LATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAI--GSCFFAPT 655 (655)
Q Consensus 612 LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~V--ss~~F~P~ 655 (655)
|++++.| +|+|||+++++++..+...... ...+ .+++|+|+
T Consensus 229 l~s~~~~-~v~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 271 (343)
T 3lrv_A 229 MVVECDQ-TVVCFDLRKDVGTLAYPTYTIP--EFKTGTVTYDIDDS 271 (343)
T ss_dssp EEEEESS-BEEEEETTSSTTCBSSCCCBC-------CCEEEEECTT
T ss_pred EEEEeCC-eEEEEEcCCCCcceeecccccc--cccccceEEEECCC
Confidence 9999955 9999999998776554432111 1112 35778775
No 40
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.74 E-value=7.5e-17 Score=167.09 Aligned_cols=180 Identities=16% Similarity=0.104 Sum_probs=135.1
Q ss_pred CCceeccCCCCceEEEEecCCCC--c--------ccccCcccCCCCcEEEeccCCCcEEEEecCCCC-------------
Q 006229 471 RPTLQHNGASSKSLLMFGSDGMG--S--------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDA------------- 527 (655)
Q Consensus 471 ~~~~~~s~S~d~s~l~ws~dg~~--~--------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~------------- 527 (655)
+...+++++.++.+.+|+.+... . ..+....+.+.++++++++.|+.|++|+...+.
T Consensus 19 ~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 98 (372)
T 1k8k_C 19 DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRA 98 (372)
T ss_dssp TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSC
T ss_pred CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCc
Confidence 34566667778888888876542 1 112223445666788888888999888654431
Q ss_pred ---------------CCCCccccccccCCCceeeeEEe-ecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeC-------
Q 006229 528 ---------------DPRDRVGRSAEVGKGFTFTEFQL-IPASTSKVESCHFSPDGKLLATGGHDKKAVLWCT------- 584 (655)
Q Consensus 528 ---------------d~~d~~~~l~d~~~~~t~~~v~~-l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl------- 584 (655)
...+..+++|+............ ...|...|.+++|+|++++|++|+.|+.|++||+
T Consensus 99 v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~ 178 (372)
T 1k8k_C 99 ARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEE 178 (372)
T ss_dssp EEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSC
T ss_pred eeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccc
Confidence 01123345555555433333333 3678999999999999999999999999999995
Q ss_pred -----------CCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEe
Q 006229 585 -----------ESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFA 653 (655)
Q Consensus 585 -----------~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~ 653 (655)
.+++++..+.+|...|++++|+|++.+|++++.|++|+|||+++++++..+..+... +.+++|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-----v~~~~~~ 253 (372)
T 1k8k_C 179 RPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLP-----LLAVTFI 253 (372)
T ss_dssp CCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCC-----EEEEEEE
T ss_pred cccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCC-----eEEEEEe
Confidence 467899999999999999999999999999999999999999999999999877543 4567777
Q ss_pred cC
Q 006229 654 PT 655 (655)
Q Consensus 654 P~ 655 (655)
|+
T Consensus 254 ~~ 255 (372)
T 1k8k_C 254 TE 255 (372)
T ss_dssp ET
T ss_pred cC
Confidence 64
No 41
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.73 E-value=9.9e-18 Score=181.32 Aligned_cols=164 Identities=13% Similarity=0.115 Sum_probs=124.9
Q ss_pred CceeccCCCCceEEEEecCCCCc----------ccccCcccCC-CCcEEEeccCCCcEEEEecCCCC-------------
Q 006229 472 PTLQHNGASSKSLLMFGSDGMGS----------LTSAPNQLTD-MDRFVDDGSLDDNVESFLSPDDA------------- 527 (655)
Q Consensus 472 ~~~~~s~S~d~s~l~ws~dg~~~----------lasss~~l~~-~~~~LasGS~D~tV~vW~s~d~~------------- 527 (655)
+.++++++.++.+.+|+.+.... -.+....+.+ .+.+|++||.|++|++|+.....
T Consensus 132 ~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~ 211 (435)
T 4e54_B 132 PSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIW 211 (435)
T ss_dssp TTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCC
T ss_pred CCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCcc
Confidence 45777888899999998764211 1122234453 45788999999999999764321
Q ss_pred ---------------CCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEE
Q 006229 528 ---------------DPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGK-LLATGGHDKKAVLWCTESFTVKS 591 (655)
Q Consensus 528 ---------------d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~-lLaSgs~DgtVrIWDl~t~~~l~ 591 (655)
...+..+++|+... +++..+.+|...|++|+|+|++. +|++|+.|++|+|||+++.+...
T Consensus 212 ~~~~~~~~~~~~l~~g~~dg~i~~wd~~~----~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~ 287 (435)
T 4e54_B 212 FCSLDVSASSRMVVTGDNVGNVILLNMDG----KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKA 287 (435)
T ss_dssp CCCEEEETTTTEEEEECSSSBEEEEESSS----CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSS
T ss_pred EEEEEECCCCCEEEEEeCCCcEeeeccCc----ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccc
Confidence 11233345555432 35567789999999999999876 88899999999999998876544
Q ss_pred Ee---cccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEeccc
Q 006229 592 TL---EEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYK 639 (655)
Q Consensus 592 tl---~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~ 639 (655)
.+ .+|...|++|+|+|++.+|+|++.|++|+|||++++.+...+..|.
T Consensus 288 ~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~ 338 (435)
T 4e54_B 288 SFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHP 338 (435)
T ss_dssp CCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCC
T ss_pred eEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEeccc
Confidence 33 5899999999999999999999999999999999999888876654
No 42
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.73 E-value=6.5e-17 Score=185.50 Aligned_cols=133 Identities=20% Similarity=0.218 Sum_probs=107.5
Q ss_pred cEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 006229 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES 586 (655)
Q Consensus 507 ~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t 586 (655)
++|++||.|++|++|+...... ......+.+.+|...|.+|+|+|++++|+||+.|++|+|||+.+
T Consensus 396 ~~l~s~s~D~~i~~W~~~~~~~--------------~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~ 461 (694)
T 3dm0_A 396 DIIVSASRDKSIILWKLTKDDK--------------AYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAA 461 (694)
T ss_dssp SEEEEEETTSEEEEEECCCSTT--------------CSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CEEEEEeCCCcEEEEEccCCCc--------------ccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 7899999999999997654310 11234567889999999999999999999999999999999999
Q ss_pred CeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 587 FTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 587 ~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
++++..+.+|...|++|+|+|++++|+|||.|++|+|||+.... ...+.... ..+...|.+++|+|+
T Consensus 462 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~-~~~~~~~~-~~h~~~v~~~~~~~~ 528 (694)
T 3dm0_A 462 GVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGEC-KYTISEGG-EGHRDWVSCVRFSPN 528 (694)
T ss_dssp TEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE-EEEECSST-TSCSSCEEEEEECSC
T ss_pred CcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCc-ceeeccCC-CCCCCcEEEEEEeCC
Confidence 99999999999999999999999999999999999999987543 33332111 112334567777764
No 43
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.73 E-value=1.5e-17 Score=176.01 Aligned_cols=168 Identities=17% Similarity=0.154 Sum_probs=117.1
Q ss_pred CCCCceeccCCC------CceEEEEecCCCCc---c---------cccCcccCCCCcEEEeccCCCcEEEEecCCCCCCC
Q 006229 469 ISRPTLQHNGAS------SKSLLMFGSDGMGS---L---------TSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPR 530 (655)
Q Consensus 469 ~s~~~~~~s~S~------d~s~l~ws~dg~~~---l---------asss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~ 530 (655)
++++.++++++. +..+.+|+...... + .+....+.+.+. +++++.|++|++|+..++...
T Consensus 51 SpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~- 128 (357)
T 4g56_B 51 RRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESL- 128 (357)
T ss_dssp CSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC---------
T ss_pred CCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeecccccee-
Confidence 455666666665 55666776533110 0 112223344444 445667888888865444110
Q ss_pred CccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCC
Q 006229 531 DRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLS 610 (655)
Q Consensus 531 d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~ 610 (655)
........+|...|++|+|+|+|++|++|+.|++|+|||+++++++..+.+|...|++|+|+|++.
T Consensus 129 --------------~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~ 194 (357)
T 4g56_B 129 --------------LVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKD 194 (357)
T ss_dssp --------------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCS
T ss_pred --------------EEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCC
Confidence 011123458999999999999999999999999999999999999999999999999999999875
Q ss_pred -EEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 611 -RLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 611 -~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+|++++.|++|+|||+++++++..+..+.. ...+.+++|+|+
T Consensus 195 ~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~---~~~v~~v~~sp~ 237 (357)
T 4g56_B 195 TIFLSCGEDGRILLWDTRKPKPATRIDFCAS---DTIPTSVTWHPE 237 (357)
T ss_dssp SCEEEEETTSCEEECCTTSSSCBCBCCCTTC---CSCEEEEEECTT
T ss_pred ceeeeeccCCceEEEECCCCceeeeeeeccc---cccccchhhhhc
Confidence 799999999999999999887765543221 233567788874
No 44
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.73 E-value=1.2e-16 Score=161.70 Aligned_cols=150 Identities=20% Similarity=0.266 Sum_probs=117.1
Q ss_pred CCCceeccCCCCceEEEEecCCCCc------------ccccCcccCC--CCcEEEeccCCCcEEEEecCCCCCCCCcccc
Q 006229 470 SRPTLQHNGASSKSLLMFGSDGMGS------------LTSAPNQLTD--MDRFVDDGSLDDNVESFLSPDDADPRDRVGR 535 (655)
Q Consensus 470 s~~~~~~s~S~d~s~l~ws~dg~~~------------lasss~~l~~--~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~ 535 (655)
++...+++++.++.+.+|+.+.... -.+....+.+ .+.+|++|+.|++|++|+...+..
T Consensus 21 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~------- 93 (351)
T 3f3f_A 21 FYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQE------- 93 (351)
T ss_dssp SSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSC-------
T ss_pred CCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcc-------
Confidence 3446778888899999998875311 1122224444 368999999999999997765521
Q ss_pred ccccCCCceeeeEEeecCCCCCeeEEEEcCC--CCEEEEEeCCCcEEEEeCCCCe-------------------------
Q 006229 536 SAEVGKGFTFTEFQLIPASTSKVESCHFSPD--GKLLATGGHDKKAVLWCTESFT------------------------- 588 (655)
Q Consensus 536 l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpd--G~lLaSgs~DgtVrIWDl~t~~------------------------- 588 (655)
......+..+..+.+|...|.+++|+|+ +.+|++++.|++|+|||+++++
T Consensus 94 ---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (351)
T 3f3f_A 94 ---ECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSD 170 (351)
T ss_dssp ---TTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCC
T ss_pred ---cccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccce
Confidence 1112234567788899999999999999 9999999999999999986442
Q ss_pred -----------------------------------EEEEecccCCCEEEEEEcCCC----CEEEEEeCCCcEEEEECCCC
Q 006229 589 -----------------------------------VKSTLEEHTQWITDVRFSPSL----SRLATSSADRTVRVWDTENV 629 (655)
Q Consensus 589 -----------------------------------~l~tl~gH~~~ItsVafsPdg----~~LaSgS~DgtVrVWDl~tg 629 (655)
.+..+.+|...|++|+|+|++ .+|++|+.|++|+|||++++
T Consensus 171 ~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 171 FCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp EEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred eEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 255677899999999999998 89999999999999999875
No 45
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.73 E-value=6.5e-17 Score=163.65 Aligned_cols=128 Identities=20% Similarity=0.260 Sum_probs=108.2
Q ss_pred CCCCceEEEEecCCCCcccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCC
Q 006229 478 GASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSK 557 (655)
Q Consensus 478 ~S~d~s~l~ws~dg~~~lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~ 557 (655)
......++.|++++. +|++|+.|++|++|+...+. .....+..+.+|...
T Consensus 10 H~~~v~~~~~~~~~~---------------~l~~~~~dg~i~iw~~~~~~---------------~~~~~~~~~~~~~~~ 59 (351)
T 3f3f_A 10 HDDLVHDVVYDFYGR---------------HVATCSSDQHIKVFKLDKDT---------------SNWELSDSWRAHDSS 59 (351)
T ss_dssp CSSCEEEEEECSSSS---------------EEEEEETTSEEEEEEECSSS---------------CCEEEEEEEECCSSC
T ss_pred cccceeEEEEcCCCC---------------EEEEeeCCCeEEEEECCCCC---------------CcceecceeccCCCc
Confidence 344667777777554 88999999999999765431 123466778899999
Q ss_pred eeEEEEcC--CCCEEEEEeCCCcEEEEeCCCC---------eEEEEecccCCCEEEEEEcCC--CCEEEEEeCCCcEEEE
Q 006229 558 VESCHFSP--DGKLLATGGHDKKAVLWCTESF---------TVKSTLEEHTQWITDVRFSPS--LSRLATSSADRTVRVW 624 (655)
Q Consensus 558 V~sl~fSp--dG~lLaSgs~DgtVrIWDl~t~---------~~l~tl~gH~~~ItsVafsPd--g~~LaSgS~DgtVrVW 624 (655)
|++|+|+| |+++|++|+.|++|+|||++++ +++..+.+|...|++|+|+|+ +.+|++++.|++|+||
T Consensus 60 v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw 139 (351)
T 3f3f_A 60 IVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLY 139 (351)
T ss_dssp EEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEE
T ss_pred EEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEe
Confidence 99999999 6999999999999999999887 678899999999999999999 9999999999999999
Q ss_pred ECCCCeEEEEE
Q 006229 625 DTENVRKLTFI 635 (655)
Q Consensus 625 Dl~tg~~v~~l 635 (655)
|+++++++..+
T Consensus 140 d~~~~~~~~~~ 150 (351)
T 3f3f_A 140 DALEPSDLRSW 150 (351)
T ss_dssp ECSSTTCTTCC
T ss_pred cCCChHHhccc
Confidence 99987765443
No 46
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.72 E-value=4.9e-17 Score=172.32 Aligned_cols=162 Identities=9% Similarity=0.033 Sum_probs=127.4
Q ss_pred CCceeccCCCCceEEEEecCCCCcc--------cccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCC
Q 006229 471 RPTLQHNGASSKSLLMFGSDGMGSL--------TSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKG 542 (655)
Q Consensus 471 ~~~~~~s~S~d~s~l~ws~dg~~~l--------asss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~ 542 (655)
+...+.+++.++.+.+|+....... .+....+.+.+++|++|+.|++|++|+..++
T Consensus 108 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~---------------- 171 (420)
T 3vl1_A 108 QMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG---------------- 171 (420)
T ss_dssp SSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC----------------
T ss_pred CCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC----------------
Confidence 3456777888899999987753221 1223355667789999999999999976544
Q ss_pred ceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecc---cCCCEEEE----------------
Q 006229 543 FTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEE---HTQWITDV---------------- 603 (655)
Q Consensus 543 ~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~g---H~~~ItsV---------------- 603 (655)
+.+..+.+|...|.+++|+|++++|++|+.|++|+|||+++++++..+.. |...|.++
T Consensus 172 ---~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 248 (420)
T 3vl1_A 172 ---SNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTS 248 (420)
T ss_dssp ---CCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCC
T ss_pred ---cCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccC
Confidence 34566789999999999999999999999999999999999999999875 44445554
Q ss_pred -----EEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 604 -----RFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 604 -----afsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+|+|++++|++|+.||+|+|||+++++.+..+.... ...|.+++|+|+
T Consensus 249 ~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----~~~v~~~~~~~~ 301 (420)
T 3vl1_A 249 KKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKF----TCSCNSLTVDGN 301 (420)
T ss_dssp CCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTT----SSCEEEEEECSS
T ss_pred cccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccccc----CCCceeEEEeCC
Confidence 457899999999999999999999999887775432 224567888875
No 47
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.72 E-value=2.5e-17 Score=176.35 Aligned_cols=167 Identities=10% Similarity=0.017 Sum_probs=133.7
Q ss_pred CCceeccCCCCceEEEEecCC---CC----------cccccCcccCCCCcEEEeccCCCcEEEEecC---CC--------
Q 006229 471 RPTLQHNGASSKSLLMFGSDG---MG----------SLTSAPNQLTDMDRFVDDGSLDDNVESFLSP---DD-------- 526 (655)
Q Consensus 471 ~~~~~~s~S~d~s~l~ws~dg---~~----------~lasss~~l~~~~~~LasGS~D~tV~vW~s~---d~-------- 526 (655)
+...+++++.|+.+.+|+... .. .-.+....+.+.+.+|++|+.|++|++|+.. .+
T Consensus 75 ~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 154 (437)
T 3gre_A 75 ETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNC 154 (437)
T ss_dssp SSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEE
T ss_pred CCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeecccc
Confidence 456888888999999998754 11 1112233556667889999999999999762 11
Q ss_pred ----------------------------C----CCCCccccccccCCCceeeeEEeecC--CCCCeeEEEEcCCCCEEEE
Q 006229 527 ----------------------------A----DPRDRVGRSAEVGKGFTFTEFQLIPA--STSKVESCHFSPDGKLLAT 572 (655)
Q Consensus 527 ----------------------------~----d~~d~~~~l~d~~~~~t~~~v~~l~g--H~~~V~sl~fSpdG~lLaS 572 (655)
. ...+..+++|+...+ .++..+.+ |...|++++|+|++++|++
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 231 (437)
T 3gre_A 155 ECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTL---ERLQIIENSPRHGAVSSICIDEECCVLIL 231 (437)
T ss_dssp EEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTC---CEEEEEECCGGGCCEEEEEECTTSCEEEE
T ss_pred ceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC---eeeEEEccCCCCCceEEEEECCCCCEEEE
Confidence 0 123455677777665 55666777 8899999999999999999
Q ss_pred EeCCCcEEEEeCCCCeEEEEec-ccCCCEEEEEEcC----CCCEEEEEeCCCcEEEEECCCCeEEEEEecccc
Q 006229 573 GGHDKKAVLWCTESFTVKSTLE-EHTQWITDVRFSP----SLSRLATSSADRTVRVWDTENVRKLTFICCYKC 640 (655)
Q Consensus 573 gs~DgtVrIWDl~t~~~l~tl~-gH~~~ItsVafsP----dg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~ 640 (655)
|+.|++|+|||+++++++.++. +|...|++|+|+| ++.+|++|+.|++|+|||+++++++..+..+..
T Consensus 232 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 304 (437)
T 3gre_A 232 GTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDE 304 (437)
T ss_dssp EETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSS
T ss_pred EcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCC
Confidence 9999999999999999999986 8999999997765 577999999999999999999999999987753
No 48
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.71 E-value=2e-16 Score=165.96 Aligned_cols=164 Identities=16% Similarity=0.213 Sum_probs=130.9
Q ss_pred Cce-eccCCCCceEEEEecCC------CCccc--------------------ccCcccCCCCcEEEeccCCCcEEEEecC
Q 006229 472 PTL-QHNGASSKSLLMFGSDG------MGSLT--------------------SAPNQLTDMDRFVDDGSLDDNVESFLSP 524 (655)
Q Consensus 472 ~~~-~~s~S~d~s~l~ws~dg------~~~la--------------------sss~~l~~~~~~LasGS~D~tV~vW~s~ 524 (655)
... +.+++.++.+.+|+... ...+. +....+.+.+ ++++|+.|+.|++|+..
T Consensus 137 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~ 215 (397)
T 1sq9_A 137 LSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELS 215 (397)
T ss_dssp -CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETT
T ss_pred CceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECC
Confidence 345 77777888999998765 21111 1222445566 89999999999999654
Q ss_pred CCCCCCCccccccccCCCceeeeEEeecC---C---CCCeeEEEEcCCCCEEEEEeCC---CcEEEEeCCCCeEEEEecc
Q 006229 525 DDADPRDRVGRSAEVGKGFTFTEFQLIPA---S---TSKVESCHFSPDGKLLATGGHD---KKAVLWCTESFTVKSTLEE 595 (655)
Q Consensus 525 d~~d~~d~~~~l~d~~~~~t~~~v~~l~g---H---~~~V~sl~fSpdG~lLaSgs~D---gtVrIWDl~t~~~l~tl~g 595 (655)
.+ ..+..+.. | ...|.+++|+|++++|++++.| +.|+|||+++++++..+.+
T Consensus 216 ~~-------------------~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~ 276 (397)
T 1sq9_A 216 TL-------------------RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSV 276 (397)
T ss_dssp TT-------------------EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECB
T ss_pred CC-------------------ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceecc
Confidence 43 45566667 8 9999999999999999999999 9999999999999999999
Q ss_pred -------------cCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEe------ccc----------ceeeeec
Q 006229 596 -------------HTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFIC------CYK----------CIFVSTA 646 (655)
Q Consensus 596 -------------H~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~------~~~----------~~v~s~~ 646 (655)
|...|++++|+|++.+|++++.|++|+|||+++++++..+. .|. ...+...
T Consensus 277 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 356 (397)
T 1sq9_A 277 PTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG 356 (397)
T ss_dssp C--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred CcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCc
Confidence 99999999999999999999999999999999999999998 440 0001345
Q ss_pred eeeEEEecC
Q 006229 647 IGSCFFAPT 655 (655)
Q Consensus 647 Vss~~F~P~ 655 (655)
|.+++|+|+
T Consensus 357 v~~~~~~~~ 365 (397)
T 1sq9_A 357 VFDVKFLKK 365 (397)
T ss_dssp EEEEEEECT
T ss_pred eeEEEeccc
Confidence 678888885
No 49
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.71 E-value=9.3e-17 Score=166.50 Aligned_cols=166 Identities=13% Similarity=0.162 Sum_probs=119.7
Q ss_pred ceeccCCCCceEEEEecCCCC--c--------ccccCcccCCC--CcEEEeccCCCcEEEEecCCCC-------------
Q 006229 473 TLQHNGASSKSLLMFGSDGMG--S--------LTSAPNQLTDM--DRFVDDGSLDDNVESFLSPDDA------------- 527 (655)
Q Consensus 473 ~~~~s~S~d~s~l~ws~dg~~--~--------lasss~~l~~~--~~~LasGS~D~tV~vW~s~d~~------------- 527 (655)
..+++++.|+++.+|+..... . -.+....+.+. +.+|++|+.|++|++|+.....
T Consensus 72 ~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~ 151 (316)
T 3bg1_A 72 NILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI 151 (316)
T ss_dssp SCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS
T ss_pred CEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC
Confidence 467777788888888875421 0 01122233333 5678888889999888654321
Q ss_pred ---------------------------------CCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCC----CEE
Q 006229 528 ---------------------------------DPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDG----KLL 570 (655)
Q Consensus 528 ---------------------------------d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG----~lL 570 (655)
.+.+..+++|+......+.++..+.+|...|.+|+|+|++ .+|
T Consensus 152 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~l 231 (316)
T 3bg1_A 152 GCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTI 231 (316)
T ss_dssp CBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEE
T ss_pred CcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceE
Confidence 1123445777765444455777889999999999999986 899
Q ss_pred EEEeCCCcEEEEeCCCC---e-EEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC-C--eEEEEEecc
Q 006229 571 ATGGHDKKAVLWCTESF---T-VKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTEN-V--RKLTFICCY 638 (655)
Q Consensus 571 aSgs~DgtVrIWDl~t~---~-~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~t-g--~~v~~l~~~ 638 (655)
++|+.|++|+|||+++. . ....+.+|...|++|+|+|++.+||+++.|++|+||++.. + .|+..+...
T Consensus 232 as~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~~~~~~~ 306 (316)
T 3bg1_A 232 ASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDVNKG 306 (316)
T ss_dssp EEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEEEECC--
T ss_pred EEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEeeeccCC
Confidence 99999999999999762 1 2335567999999999999999999999999999999863 3 455555443
No 50
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.71 E-value=1.5e-16 Score=166.05 Aligned_cols=169 Identities=8% Similarity=-0.038 Sum_probs=127.2
Q ss_pred CCceeccCCCCceEEEEecCCCCccc----ccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceee
Q 006229 471 RPTLQHNGASSKSLLMFGSDGMGSLT----SAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFT 546 (655)
Q Consensus 471 ~~~~~~s~S~d~s~l~ws~dg~~~la----sss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~ 546 (655)
+...+++++.|+.+.+|+......+. .....+..+.. +++|+.|++|++|..... ..+|+.... .
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~-------~~~~~~~~~---~ 115 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA-IISRGPCNRLLLLYPGNQ-------ITILDSKTN---K 115 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS-EEEECSTTEEEEEETTTE-------EEEEETTTC---C
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc-eEEecCCCeEEEEEccCc-------eEEeecCCc---c
Confidence 34678889999999999987532211 11112222223 899999999999965432 233444443 2
Q ss_pred eEEee-cCCCCCeeEEEEcC--CCCEEEEEeCCCcEEEEeCCCCeEEEEec-ccCCCEEEEEEcCCCCEEEEEeCCCcEE
Q 006229 547 EFQLI-PASTSKVESCHFSP--DGKLLATGGHDKKAVLWCTESFTVKSTLE-EHTQWITDVRFSPSLSRLATSSADRTVR 622 (655)
Q Consensus 547 ~v~~l-~gH~~~V~sl~fSp--dG~lLaSgs~DgtVrIWDl~t~~~l~tl~-gH~~~ItsVafsPdg~~LaSgS~DgtVr 622 (655)
.+..+ .+|.+.|.+++|+| ++++|++|+.|++|+|||+++++++..+. .|...|++++|+|++.+|++|+.|++|+
T Consensus 116 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~ 195 (343)
T 3lrv_A 116 VLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILD 195 (343)
T ss_dssp EEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEE
T ss_pred eeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEE
Confidence 23333 37788999999999 99999999999999999999999987774 4566899999999999999999999999
Q ss_pred EEECCCCeEE-EEEec-ccceeeeeceeeEEEecC
Q 006229 623 VWDTENVRKL-TFICC-YKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 623 VWDl~tg~~v-~~l~~-~~~~v~s~~Vss~~F~P~ 655 (655)
|||+++++++ ..+.. |.. .|.+++|+|+
T Consensus 196 iwd~~~~~~~~~~~~~~h~~-----~v~~l~fs~~ 225 (343)
T 3lrv_A 196 VYNLSSPDQASSRFPVDEEA-----KIKEVKFADN 225 (343)
T ss_dssp EEESSCTTSCCEECCCCTTS-----CEEEEEECTT
T ss_pred EEECCCCCCCccEEeccCCC-----CEEEEEEeCC
Confidence 9999999888 77776 554 4568888885
No 51
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.71 E-value=6.6e-17 Score=167.60 Aligned_cols=139 Identities=16% Similarity=0.151 Sum_probs=108.7
Q ss_pred CCceEEEEecCCCCcccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCee
Q 006229 480 SSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVE 559 (655)
Q Consensus 480 ~d~s~l~ws~dg~~~lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~ 559 (655)
.....+.|++++. +|++|+.|++|++|+...+ ....+..+.+|.+.|.
T Consensus 14 ~~V~~v~~s~~g~---------------~lasgs~D~~v~lwd~~~~-----------------~~~~~~~l~gH~~~V~ 61 (316)
T 3bg1_A 14 DMIHDAQMDYYGT---------------RLATCSSDRSVKIFDVRNG-----------------GQILIADLRGHEGPVW 61 (316)
T ss_dssp CCEEEEEECGGGC---------------EEEEEETTTEEEEEEEETT-----------------EEEEEEEEECCSSCEE
T ss_pred CeEEEeeEcCCCC---------------EEEEEeCCCeEEEEEecCC-----------------CcEEEEEEcCCCccEE
Confidence 3456666766544 8999999999999965433 1134677889999999
Q ss_pred EEEEcC--CCCEEEEEeCCCcEEEEeCCCC--eEEEEecccCCCEEEEEEcCC--CCEEEEEeCCCcEEEEECCCCeEE-
Q 006229 560 SCHFSP--DGKLLATGGHDKKAVLWCTESF--TVKSTLEEHTQWITDVRFSPS--LSRLATSSADRTVRVWDTENVRKL- 632 (655)
Q Consensus 560 sl~fSp--dG~lLaSgs~DgtVrIWDl~t~--~~l~tl~gH~~~ItsVafsPd--g~~LaSgS~DgtVrVWDl~tg~~v- 632 (655)
+|+|++ ++++|++|+.|++|+|||++++ .++.++.+|...|++|+|+|+ +.+|++|+.|++|+|||++++...
T Consensus 62 ~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~ 141 (316)
T 3bg1_A 62 QVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE 141 (316)
T ss_dssp EEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEE
T ss_pred EEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcc
Confidence 999986 4899999999999999999987 467788999999999999998 789999999999999999876322
Q ss_pred --EEEecccceeeeeceeeEEEecC
Q 006229 633 --TFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 633 --~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
..+..|. ..+.+++|+|+
T Consensus 142 ~~~~~~~h~-----~~v~~~~~~~~ 161 (316)
T 3bg1_A 142 VKKINNAHT-----IGCNAVSWAPA 161 (316)
T ss_dssp ECCBTTSSS-----SCBCCCEECCC
T ss_pred eeeeecccc-----CCcceEEEccc
Confidence 2223333 23456666663
No 52
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.71 E-value=7.4e-16 Score=156.69 Aligned_cols=161 Identities=18% Similarity=0.140 Sum_probs=129.8
Q ss_pred CCceeccCCCCceEEEEecCCCCc-------------ccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCcccccc
Q 006229 471 RPTLQHNGASSKSLLMFGSDGMGS-------------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSA 537 (655)
Q Consensus 471 ~~~~~~s~S~d~s~l~ws~dg~~~-------------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~ 537 (655)
+...+.+++ ++.+.+|+.+.... ..+....+.+.+.++++++.|+.|++|+...+.
T Consensus 62 ~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~---------- 130 (337)
T 1gxr_A 62 PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT---------- 130 (337)
T ss_dssp SSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC-----------
T ss_pred CCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCC----------
Confidence 345666666 88999998865321 112223456667889999999999999665431
Q ss_pred ccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeC
Q 006229 538 EVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSA 617 (655)
Q Consensus 538 d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~ 617 (655)
......+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+.+|...|++++|+|++.+|++++.
T Consensus 131 -------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 203 (337)
T 1gxr_A 131 -------PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL 203 (337)
T ss_dssp --------EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred -------cceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEec
Confidence 1345667789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 618 DRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 618 DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
|+.|++||+++++++..+.... .+.+++|+|+
T Consensus 204 dg~i~~~d~~~~~~~~~~~~~~------~v~~~~~s~~ 235 (337)
T 1gxr_A 204 DNTVRSWDLREGRQLQQHDFTS------QIFSLGYCPT 235 (337)
T ss_dssp TSEEEEEETTTTEEEEEEECSS------CEEEEEECTT
T ss_pred CCcEEEEECCCCceEeeecCCC------ceEEEEECCC
Confidence 9999999999999888775332 3556777774
No 53
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.71 E-value=2.6e-16 Score=166.28 Aligned_cols=83 Identities=22% Similarity=0.245 Sum_probs=79.1
Q ss_pred EEeecCCCCCeeEEEEcCCCCEEEEEeCCCc-EEEEeCCCCeEEEEec-c-cCCCEEEEEEcCCCCEEEEEeCCCcEEEE
Q 006229 548 FQLIPASTSKVESCHFSPDGKLLATGGHDKK-AVLWCTESFTVKSTLE-E-HTQWITDVRFSPSLSRLATSSADRTVRVW 624 (655)
Q Consensus 548 v~~l~gH~~~V~sl~fSpdG~lLaSgs~Dgt-VrIWDl~t~~~l~tl~-g-H~~~ItsVafsPdg~~LaSgS~DgtVrVW 624 (655)
+..+.+|.+.|++|+|+|||++|++|+.|++ |+|||+++++++.++. + |...|++|+|+|++.+|++++.|++|+||
T Consensus 188 ~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw 267 (355)
T 3vu4_A 188 GVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVF 267 (355)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEE
T ss_pred cEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEE
Confidence 6788999999999999999999999999999 9999999999999998 6 99999999999999999999999999999
Q ss_pred ECCCCe
Q 006229 625 DTENVR 630 (655)
Q Consensus 625 Dl~tg~ 630 (655)
|++++.
T Consensus 268 ~~~~~~ 273 (355)
T 3vu4_A 268 EIFNDQ 273 (355)
T ss_dssp ESSCCS
T ss_pred EccCCC
Confidence 998653
No 54
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.70 E-value=3.4e-17 Score=171.32 Aligned_cols=128 Identities=16% Similarity=0.173 Sum_probs=100.3
Q ss_pred CcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 006229 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTE 585 (655)
Q Consensus 506 ~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~ 585 (655)
+++|++|+.|++|++|+..++ .+..+..+.+|...|.+++|+|++++|++|+.|++|+|||+.
T Consensus 23 g~~l~~~~~d~~i~iw~~~~~-----------------~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 23 RTEFVTTTATNQVELYEQDGN-----------------GWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp SSEEECCCSSSCBCEEEEETT-----------------EEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred CCEEEEecCCCEEEEEEccCC-----------------ceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 358899999999999965432 124566778999999999999999999999999999999999
Q ss_pred CCe---EEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCe---EEEEEec-ccceeeeeceeeEEEecC
Q 006229 586 SFT---VKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVR---KLTFICC-YKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 586 t~~---~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~---~v~~l~~-~~~~v~s~~Vss~~F~P~ 655 (655)
++. .+..+.+|...|++|+|+|++++|++|+.|++|+|||++++. ++..+.. |.. .|.+++|+|+
T Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~ 157 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRS-----TILSLDWHPN 157 (377)
T ss_dssp ---CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCS-----CEEEEEECTT
T ss_pred CCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCC-----CeEEEEEcCC
Confidence 877 677888999999999999999999999999999999999887 3666665 443 4567788875
No 55
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.70 E-value=3.6e-17 Score=183.91 Aligned_cols=160 Identities=10% Similarity=-0.006 Sum_probs=126.7
Q ss_pred CceeccCCCCceEEEEecCCCCcc-------------------cccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCc
Q 006229 472 PTLQHNGASSKSLLMFGSDGMGSL-------------------TSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDR 532 (655)
Q Consensus 472 ~~~~~s~S~d~s~l~ws~dg~~~l-------------------asss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~ 532 (655)
..++++++.|+++.+|+....... .+....+.+ +..|++|+.|++|++|+..++.
T Consensus 225 ~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~-~~~lasgs~DgtV~lWD~~~~~----- 298 (524)
T 2j04_B 225 VGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS-PTTVVCGFKNGFVAEFDLTDPE----- 298 (524)
T ss_dssp SCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS-SSEEEEEETTSEEEEEETTBCS-----
T ss_pred CceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC-CCeEEEEeCCCEEEEEECCCCC-----
Confidence 357888888999999998643110 011122233 3579999999999999765431
Q ss_pred cccccccCCCceeeeEEeecCCCCCeeEE--EEcCCC-CEEEEEeCCCcEEEEeCCCCeEEEEecccCC--CEEEEEEcC
Q 006229 533 VGRSAEVGKGFTFTEFQLIPASTSKVESC--HFSPDG-KLLATGGHDKKAVLWCTESFTVKSTLEEHTQ--WITDVRFSP 607 (655)
Q Consensus 533 ~~~l~d~~~~~t~~~v~~l~gH~~~V~sl--~fSpdG-~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~--~ItsVafsP 607 (655)
.....+.+|...|++| +|+++| .+||||+.|++|||||+++++++.++.+|.. .|++|+|+|
T Consensus 299 -------------~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp 365 (524)
T 2j04_B 299 -------------VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCP 365 (524)
T ss_dssp -------------SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEET
T ss_pred -------------CceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCC
Confidence 1234567899999999 578888 8999999999999999999988888888874 589999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 608 SLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 608 dg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
++..|++++.|++|+|||++++.++.++.+|... |.+++|+|+
T Consensus 366 ~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~-----V~sva~Sp~ 408 (524)
T 2j04_B 366 QIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETT-----ITAIGVSRL 408 (524)
T ss_dssp TTTEEEEECSSSEEEEEETTCTTCCEEEEECSSC-----EEEEECCSS
T ss_pred CcCeEEEeCCCCcEEEEECcccccceeeecCCCc-----eEEEEeCCC
Confidence 9999999999999999999999998888877654 557788875
No 56
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.70 E-value=2.4e-16 Score=167.54 Aligned_cols=148 Identities=10% Similarity=0.039 Sum_probs=109.7
Q ss_pred cCCCCcEE--EeccCCCcEEEEecCCCC------------------CCC------CccccccccCCCceeeeEEeecCCC
Q 006229 502 LTDMDRFV--DDGSLDDNVESFLSPDDA------------------DPR------DRVGRSAEVGKGFTFTEFQLIPAST 555 (655)
Q Consensus 502 l~~~~~~L--asGS~D~tV~vW~s~d~~------------------d~~------d~~~~l~d~~~~~t~~~v~~l~gH~ 555 (655)
|.+.++++ ++++.|++|++|+..++. ++. +..+.+|+..++.. .......+|.
T Consensus 141 fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~-~~~~~~~~~~ 219 (365)
T 4h5i_A 141 ISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSC-IARKTDFDKN 219 (365)
T ss_dssp ECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCE-EEEECCCCTT
T ss_pred EcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcc-eeeeecCCCC
Confidence 34444454 577789999999876653 000 01112222222211 1223455788
Q ss_pred CCeeEEEEcCCCCEEEEEeCCC----cEEEEeCCCCeE----EEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 006229 556 SKVESCHFSPDGKLLATGGHDK----KAVLWCTESFTV----KSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTE 627 (655)
Q Consensus 556 ~~V~sl~fSpdG~lLaSgs~Dg----tVrIWDl~t~~~----l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~ 627 (655)
..|.+|+|+||+++|++++.|+ ++++||+..... ...+.+|...|++|+|+|+|++||+|+.|++|+|||++
T Consensus 220 ~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~ 299 (365)
T 4h5i_A 220 WSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLK 299 (365)
T ss_dssp EEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred CCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECC
Confidence 8999999999999999999887 688999876643 45678999999999999999999999999999999999
Q ss_pred CCeEEEEE-ecccceeeeeceeeEEEecC
Q 006229 628 NVRKLTFI-CCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 628 tg~~v~~l-~~~~~~v~s~~Vss~~F~P~ 655 (655)
+++++..+ .+|.. .|.+++|+||
T Consensus 300 ~~~~~~~~~~gH~~-----~V~~v~fSpd 323 (365)
T 4h5i_A 300 DLSMSKIFKQAHSF-----AITEVTISPD 323 (365)
T ss_dssp TTEEEEEETTSSSS-----CEEEEEECTT
T ss_pred CCcEEEEecCcccC-----CEEEEEECCC
Confidence 99999886 45654 4668999986
No 57
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.70 E-value=5.4e-16 Score=171.56 Aligned_cols=159 Identities=21% Similarity=0.313 Sum_probs=129.1
Q ss_pred CCCceeccCCCCceEEEEecCCCCc-------ccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCC
Q 006229 470 SRPTLQHNGASSKSLLMFGSDGMGS-------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKG 542 (655)
Q Consensus 470 s~~~~~~s~S~d~s~l~ws~dg~~~-------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~ 542 (655)
++...+.+++.++.+.+|+..+... ..+....+.+.+++|++++.|+.|++|+..
T Consensus 354 ~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~------------------ 415 (577)
T 2ymu_A 354 PDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN------------------ 415 (577)
T ss_dssp TTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT------------------
T ss_pred CCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC------------------
Confidence 3445667777888888898765311 112223456677889999999999999421
Q ss_pred ceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEE
Q 006229 543 FTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVR 622 (655)
Q Consensus 543 ~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVr 622 (655)
.+.+..+.+|...|.+++|+||+++|++++.|++|+|||. +++++.++.+|...|++|+|+|++++|++++.|++|+
T Consensus 416 --~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~ 492 (577)
T 2ymu_A 416 --GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVK 492 (577)
T ss_dssp --CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEE
T ss_pred --CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEE
Confidence 1356677899999999999999999999999999999996 5688889999999999999999999999999999999
Q ss_pred EEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 623 VWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 623 VWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
|||. +++++..+.+|... |.+++|+|+
T Consensus 493 iw~~-~~~~~~~~~~h~~~-----v~~l~~s~d 519 (577)
T 2ymu_A 493 LWNR-NGQLLQTLTGHSSS-----VRGVAFSPD 519 (577)
T ss_dssp EEET-TSCEEEEEECCSSC-----EEEEEECTT
T ss_pred EEcC-CCCEEEEEeCCCCC-----EEEEEEcCC
Confidence 9995 68889999888654 457788885
No 58
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.70 E-value=8.2e-16 Score=157.24 Aligned_cols=180 Identities=17% Similarity=0.183 Sum_probs=129.3
Q ss_pred CCceeccCCCCceEEEEecCCCCccc--------ccCcccCCCCcEEEeccCCCcEEEEecCCCC---------------
Q 006229 471 RPTLQHNGASSKSLLMFGSDGMGSLT--------SAPNQLTDMDRFVDDGSLDDNVESFLSPDDA--------------- 527 (655)
Q Consensus 471 ~~~~~~s~S~d~s~l~ws~dg~~~la--------sss~~l~~~~~~LasGS~D~tV~vW~s~d~~--------------- 527 (655)
+...+.+++.++.+..|......... .....+...+.++++|+.|+.+++|+.....
T Consensus 97 dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~ 176 (340)
T 4aow_A 97 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSC 176 (340)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEE
T ss_pred CCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccc
Confidence 34566677777777777776532111 1111334555678888888888888653321
Q ss_pred --------------CCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEe
Q 006229 528 --------------DPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTL 593 (655)
Q Consensus 528 --------------d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl 593 (655)
...+..+++|+.... ..+..+.+|.+.|++|+|+|++++|++|+.|++|+|||+++.+++..+
T Consensus 177 ~~~~~~~~~~~~~s~~~d~~i~i~d~~~~---~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 253 (340)
T 4aow_A 177 VRFSPNSSNPIIVSCGWDKLVKVWNLANC---KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 253 (340)
T ss_dssp EEECSCSSSCEEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEccCCCCcEEEEEcCCCEEEEEECCCC---ceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeee
Confidence 011233455555544 567788899999999999999999999999999999999999999888
Q ss_pred cccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccc----eeeeeceeeEEEecC
Q 006229 594 EEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKC----IFVSTAIGSCFFAPT 655 (655)
Q Consensus 594 ~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~----~v~s~~Vss~~F~P~ 655 (655)
.+| ..|++++|+|++. +++++.|++|+|||++++.++..+..... ..+...|.+++|+|+
T Consensus 254 ~~~-~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d 317 (340)
T 4aow_A 254 DGG-DIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD 317 (340)
T ss_dssp ECS-SCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTT
T ss_pred cCC-ceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCC
Confidence 754 6899999999875 55666799999999999988887764322 123445778899986
No 59
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.70 E-value=3e-16 Score=167.36 Aligned_cols=185 Identities=15% Similarity=0.113 Sum_probs=126.3
Q ss_pred CCCceeccCCCCceEEEEecCCCCc-------------------------------ccccCcccCCCC--cEEEeccCCC
Q 006229 470 SRPTLQHNGASSKSLLMFGSDGMGS-------------------------------LTSAPNQLTDMD--RFVDDGSLDD 516 (655)
Q Consensus 470 s~~~~~~s~S~d~s~l~ws~dg~~~-------------------------------lasss~~l~~~~--~~LasGS~D~ 516 (655)
++...+++++.++.+.+|+...... -.+....+.+.+ ..+++++.|+
T Consensus 38 ~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~ 117 (447)
T 3dw8_B 38 HSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDK 117 (447)
T ss_dssp SSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSS
T ss_pred CCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCC
Confidence 3456788888899999998774321 112223444544 6889999999
Q ss_pred cEEEEecCCCCC-----------C------CCcccccccc---CCCceeeeEEe-ecCCCCCeeEEEEcCCCCEEEEEeC
Q 006229 517 NVESFLSPDDAD-----------P------RDRVGRSAEV---GKGFTFTEFQL-IPASTSKVESCHFSPDGKLLATGGH 575 (655)
Q Consensus 517 tV~vW~s~d~~d-----------~------~d~~~~l~d~---~~~~t~~~v~~-l~gH~~~V~sl~fSpdG~lLaSgs~ 575 (655)
+|++|+...... + ......+... .......+.+. ..+|...|.+++|+|++++|++| .
T Consensus 118 ~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~ 196 (447)
T 3dw8_B 118 TIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-D 196 (447)
T ss_dssp CEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-C
T ss_pred eEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-C
Confidence 999997654210 0 0000000000 00001112233 36899999999999999999998 7
Q ss_pred CCcEEEEeCC-CCeEEE-------EecccCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCeE----EEEEeccccee
Q 006229 576 DKKAVLWCTE-SFTVKS-------TLEEHTQWITDVRFSPSL-SRLATSSADRTVRVWDTENVRK----LTFICCYKCIF 642 (655)
Q Consensus 576 DgtVrIWDl~-t~~~l~-------tl~gH~~~ItsVafsPdg-~~LaSgS~DgtVrVWDl~tg~~----v~~l~~~~~~v 642 (655)
|++|+|||++ ..+++. .+.+|...|++|+|+|++ .+|++|+.|++|+|||++++++ +..+..+....
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 276 (447)
T 3dw8_B 197 DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPS 276 (447)
T ss_dssp SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC----
T ss_pred CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCcc
Confidence 9999999998 445554 367899999999999998 9999999999999999999887 67777765421
Q ss_pred ee-------eceeeEEEecC
Q 006229 643 VS-------TAIGSCFFAPT 655 (655)
Q Consensus 643 ~s-------~~Vss~~F~P~ 655 (655)
.. ..|.+++|+|+
T Consensus 277 ~~~~~~~~~~~v~~~~~s~~ 296 (447)
T 3dw8_B 277 NRSFFSEIISSISDVKFSHS 296 (447)
T ss_dssp -CCHHHHHTTCEEEEEECTT
T ss_pred ccccccccCceEEEEEECCC
Confidence 11 15678888885
No 60
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.69 E-value=7.5e-16 Score=161.97 Aligned_cols=158 Identities=17% Similarity=0.177 Sum_probs=123.9
Q ss_pred ceeccCCCCceEEEEecCCCCcc----------cccCcccCC-CCcEEEeccCCCcEEEEecCCCCCCCCccccccccCC
Q 006229 473 TLQHNGASSKSLLMFGSDGMGSL----------TSAPNQLTD-MDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGK 541 (655)
Q Consensus 473 ~~~~s~S~d~s~l~ws~dg~~~l----------asss~~l~~-~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~ 541 (655)
..+++++.++.+.+|+....... .+....+.+ ...++++++.|++|++|+....
T Consensus 87 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~--------------- 151 (383)
T 3ei3_B 87 TTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGS--------------- 151 (383)
T ss_dssp TEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSC---------------
T ss_pred CEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCC---------------
Confidence 67888888999999998753221 111223444 4578899999999999965421
Q ss_pred CceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCC-EEEEEeCCCc
Q 006229 542 GFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLS-RLATSSADRT 620 (655)
Q Consensus 542 ~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~-~LaSgS~Dgt 620 (655)
....+....+|...|.+++|+|++++|++|+.|++|++||+ +++++.++.+|...|++|+|+|++. +|++|+.|++
T Consensus 152 --~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~ 228 (383)
T 3ei3_B 152 --VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDAT 228 (383)
T ss_dssp --EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred --ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCE
Confidence 12233333456688999999999999999999999999999 5788889999999999999999999 9999999999
Q ss_pred EEEEECCC----CeEEEEEecccceeeeeceeeEEEec
Q 006229 621 VRVWDTEN----VRKLTFICCYKCIFVSTAIGSCFFAP 654 (655)
Q Consensus 621 VrVWDl~t----g~~v~~l~~~~~~v~s~~Vss~~F~P 654 (655)
|+|||+++ +.++..+. |. ..|.+++|+|
T Consensus 229 i~iwd~~~~~~~~~~~~~~~-~~-----~~v~~~~~s~ 260 (383)
T 3ei3_B 229 VKLWDLRNIKDKNSYIAEMP-HE-----KPVNAAYFNP 260 (383)
T ss_dssp EEEEEGGGCCSTTCEEEEEE-CS-----SCEEEEEECT
T ss_pred EEEEeCCCCCcccceEEEec-CC-----CceEEEEEcC
Confidence 99999998 66776663 33 3456788887
No 61
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.69 E-value=4.8e-16 Score=162.99 Aligned_cols=176 Identities=11% Similarity=0.092 Sum_probs=139.1
Q ss_pred CCceeccCCCCceEEEEecCCCCc-------ccccCcccCCCCcEEEeccCCCcEEEEecCCCCC---------------
Q 006229 471 RPTLQHNGASSKSLLMFGSDGMGS-------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDAD--------------- 528 (655)
Q Consensus 471 ~~~~~~s~S~d~s~l~ws~dg~~~-------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d--------------- 528 (655)
+...+.+++.++.+.+|+.++... ..+....+.+.+.+|++++.|+.|++|+..++..
T Consensus 119 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 198 (425)
T 1r5m_A 119 DGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSIN 198 (425)
T ss_dssp TSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--------
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcccee
Confidence 445777788889999998655321 1222335566778899999999999998765431
Q ss_pred -------------------------CCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEe
Q 006229 529 -------------------------PRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWC 583 (655)
Q Consensus 529 -------------------------~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWD 583 (655)
..+..+.+|+.... ..+..+..|...|.+++|+|++++|++++.|+.|+|||
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d 275 (425)
T 1r5m_A 199 AENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEK---TPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWH 275 (425)
T ss_dssp -------CCCBSCCEEEETTEEEEECGGGCEEEEETTCS---SCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred eccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCC---ceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 01122344444443 44566778999999999999999999999999999999
Q ss_pred CCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 584 TESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 584 l~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+++++++..+.+|...|++++|+|++ +|++++.|+.|+|||+++++++..+..+... +.+++|+|+
T Consensus 276 ~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-----i~~~~~s~~ 341 (425)
T 1r5m_A 276 GGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVP-----IFAGRISQD 341 (425)
T ss_dssp SSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCC-----EEEEEECTT
T ss_pred CCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCcc-----EEEEEEcCC
Confidence 99999999999999999999999999 9999999999999999999999988877553 456777774
No 62
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.69 E-value=6.1e-16 Score=159.03 Aligned_cols=179 Identities=16% Similarity=0.170 Sum_probs=133.6
Q ss_pred CCceeccCCCCceEEEEecCCCCc--------ccccCcccCCCCcEEEeccCCCcEEEEecCCCCCC-------------
Q 006229 471 RPTLQHNGASSKSLLMFGSDGMGS--------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADP------------- 529 (655)
Q Consensus 471 ~~~~~~s~S~d~s~l~ws~dg~~~--------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~------------- 529 (655)
+...+++++.++.+.+|+...... -.+....+.+.+.+|++++.|++|++|+..++...
T Consensus 43 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~ 122 (369)
T 3zwl_B 43 EGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVE 122 (369)
T ss_dssp TSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEE
T ss_pred CCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEE
Confidence 445677777888888998754221 11223345666788999999999999987665410
Q ss_pred ------------CC-----ccccccccCCCcee--------eeEEeecCCCC--CeeEEEEcCCCCEEEEEeCCCcEEEE
Q 006229 530 ------------RD-----RVGRSAEVGKGFTF--------TEFQLIPASTS--KVESCHFSPDGKLLATGGHDKKAVLW 582 (655)
Q Consensus 530 ------------~d-----~~~~l~d~~~~~t~--------~~v~~l~gH~~--~V~sl~fSpdG~lLaSgs~DgtVrIW 582 (655)
.+ ..+.+|+....... ..+..+..|.. .|.+++|+|++++|++++.|+.|++|
T Consensus 123 ~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~ 202 (369)
T 3zwl_B 123 FSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKY 202 (369)
T ss_dssp ECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEE
T ss_pred EccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEE
Confidence 01 33344444332211 13344556666 89999999999999999999999999
Q ss_pred eCCC-CeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 583 CTES-FTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 583 Dl~t-~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
|+++ .+.+..+.+|...|++++|+|++.+|++++.|+.|+|||+++++++..+.... .+..++|+|+
T Consensus 203 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~------~~~~~~~~~~ 270 (369)
T 3zwl_B 203 DVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDC------PLNTAVITPL 270 (369)
T ss_dssp ETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS------CEEEEEECSS
T ss_pred ECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCC------CceeEEecCC
Confidence 9998 78999999999999999999999999999999999999999999998887332 3446666664
No 63
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.69 E-value=1.1e-16 Score=179.95 Aligned_cols=171 Identities=9% Similarity=0.038 Sum_probs=117.7
Q ss_pred ceeccCCCCceEEEEecCCCCc-------cc-----ccCcccCC------CCcEEEeccCCCcEEEEecCCCCCCCCccc
Q 006229 473 TLQHNGASSKSLLMFGSDGMGS-------LT-----SAPNQLTD------MDRFVDDGSLDDNVESFLSPDDADPRDRVG 534 (655)
Q Consensus 473 ~~~~s~S~d~s~l~ws~dg~~~-------la-----sss~~l~~------~~~~LasGS~D~tV~vW~s~d~~d~~d~~~ 534 (655)
..+.+++.|+++.+|+.++... +. +....+.+ ...+|++|+.|++|++|+...+........
T Consensus 174 ~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~ 253 (524)
T 2j04_B 174 EMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFK 253 (524)
T ss_dssp --------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEE
T ss_pred hhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccce
Confidence 3456667778888887754321 01 11112232 246899999999999998765421100000
Q ss_pred cccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCC-eEEEEecccCCCEEEE--EEcCCC-C
Q 006229 535 RSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESF-TVKSTLEEHTQWITDV--RFSPSL-S 610 (655)
Q Consensus 535 ~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~-~~l~tl~gH~~~ItsV--afsPdg-~ 610 (655)
. .......+.+|...|+||+|++++ .|++|+.|++|+|||++++ .++.++.+|...|++| +|+|++ .
T Consensus 254 ---~-----~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~ 324 (524)
T 2j04_B 254 ---M-----CEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDT 324 (524)
T ss_dssp ---C-----CCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCC
T ss_pred ---e-----ecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCe
Confidence 0 012335678999999999999864 8999999999999999976 4456789999999999 578887 8
Q ss_pred EEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 611 RLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 611 ~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+|||||.|++|||||+++++++.++.+|... ..|.+++|+|+
T Consensus 325 ~laS~S~D~tvklWD~~~~~~~~~~~~~~~~---~~v~~v~fsp~ 366 (524)
T 2j04_B 325 VVSTVAVDGYFYIFNPKDIATTKTTVSRFRG---SNLVPVVYCPQ 366 (524)
T ss_dssp EEEEEETTSEEEEECGGGHHHHCEEEEECSC---CSCCCEEEETT
T ss_pred EEEEeccCCeEEEEECCCCCccccccccccc---CcccceEeCCC
Confidence 9999999999999999998887777655421 12567888884
No 64
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.68 E-value=9.3e-17 Score=172.01 Aligned_cols=120 Identities=13% Similarity=0.100 Sum_probs=98.3
Q ss_pred CCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcC--------CCCEEEEEe
Q 006229 503 TDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSP--------DGKLLATGG 574 (655)
Q Consensus 503 ~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSp--------dG~lLaSgs 574 (655)
.....++++|+.|++|++|+...+ .......+..+.+|.+.|.+|+|+| |+++|||||
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~--------------~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s 163 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNE--------------TIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG 163 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETT--------------EEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE
T ss_pred CCCCCEEEEEeCCCcEEEEECCCC--------------ccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE
Confidence 344468999999999999965544 1112234567889999999999998 899999999
Q ss_pred CCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCeEEEEEe
Q 006229 575 HDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLS-RLATSSADRTVRVWDTENVRKLTFIC 636 (655)
Q Consensus 575 ~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~-~LaSgS~DgtVrVWDl~tg~~v~~l~ 636 (655)
.|++|||||++++.++..+.+|...|++|+|+|++. +|++|+.|++|+|||++++.....+.
T Consensus 164 ~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~ 226 (393)
T 4gq1_A 164 DDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENS 226 (393)
T ss_dssp TTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC------
T ss_pred CCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCccccccc
Confidence 999999999999988888999999999999999874 79999999999999999887665543
No 65
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.68 E-value=2.5e-16 Score=170.89 Aligned_cols=154 Identities=17% Similarity=0.160 Sum_probs=123.0
Q ss_pred CCCCce-eccCCCCceEEEEecC--CCCcc----------cccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCcccc
Q 006229 469 ISRPTL-QHNGASSKSLLMFGSD--GMGSL----------TSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGR 535 (655)
Q Consensus 469 ~s~~~~-~~s~S~d~s~l~ws~d--g~~~l----------asss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~ 535 (655)
.++... .++++.++.+.+|+.. ....+ .+....+.+.+.+|++|+.|+.|.+|...++....
T Consensus 111 s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~----- 185 (450)
T 2vdu_B 111 TSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEK----- 185 (450)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSS-----
T ss_pred cCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccccc-----
Confidence 344455 4778889999999987 32111 11233556777899999999999999655442100
Q ss_pred ccccCCCceeeeEEeecCCCCCeeEEEEcCC---CCEEEEEeCCCcEEEEeCCCCeEEEE-ecccCCCEEEEEEcCCCCE
Q 006229 536 SAEVGKGFTFTEFQLIPASTSKVESCHFSPD---GKLLATGGHDKKAVLWCTESFTVKST-LEEHTQWITDVRFSPSLSR 611 (655)
Q Consensus 536 l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpd---G~lLaSgs~DgtVrIWDl~t~~~l~t-l~gH~~~ItsVafsPdg~~ 611 (655)
.++..+.+|...|.+|+|+|+ +++|++|+.|++|+|||+++++++.. +.+|...|++++|+ ++.+
T Consensus 186 ----------~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~ 254 (450)
T 2vdu_B 186 ----------FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYL 254 (450)
T ss_dssp ----------CCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTE
T ss_pred ----------ccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCE
Confidence 023356689999999999999 99999999999999999999988877 56999999999999 9999
Q ss_pred EEEEeCCCcEEEEECCCCeEEEEEecc
Q 006229 612 LATSSADRTVRVWDTENVRKLTFICCY 638 (655)
Q Consensus 612 LaSgS~DgtVrVWDl~tg~~v~~l~~~ 638 (655)
|++|+.|++|+|||+++++++..+..+
T Consensus 255 l~s~~~d~~v~vwd~~~~~~~~~~~~~ 281 (450)
T 2vdu_B 255 LLSAGGDDKIFAWDWKTGKNLSTFDYN 281 (450)
T ss_dssp EEEEESSSEEEEEETTTCCEEEEEECH
T ss_pred EEEEeCCCeEEEEECCCCcEeeeecch
Confidence 999999999999999999999888754
No 66
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.68 E-value=7.3e-16 Score=158.40 Aligned_cols=159 Identities=20% Similarity=0.270 Sum_probs=124.3
Q ss_pred CceeccCCCCceEEEEecCCCCcc----------cccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCC
Q 006229 472 PTLQHNGASSKSLLMFGSDGMGSL----------TSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGK 541 (655)
Q Consensus 472 ~~~~~s~S~d~s~l~ws~dg~~~l----------asss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~ 541 (655)
...+.+++.++.+.+|+.+..+.. .+....+.+.+.+|++|+.|++|++|+...+
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--------------- 118 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSN--------------- 118 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT---------------
T ss_pred ceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCC---------------
Confidence 367888888999999998752211 1223355667789999999999999966544
Q ss_pred CceeeeEEeecCCCCCeeEEEE--cCCCCEEEEEeCCCcEEEEeCCCCeEEE----------------------------
Q 006229 542 GFTFTEFQLIPASTSKVESCHF--SPDGKLLATGGHDKKAVLWCTESFTVKS---------------------------- 591 (655)
Q Consensus 542 ~~t~~~v~~l~gH~~~V~sl~f--SpdG~lLaSgs~DgtVrIWDl~t~~~l~---------------------------- 591 (655)
.. ..+.+|...|.+++| ++++++|++++.|++|++||+++++++.
T Consensus 119 ----~~-~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 193 (368)
T 3mmy_A 119 ----QA-IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLI 193 (368)
T ss_dssp ----EE-EEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEE
T ss_pred ----Cc-eeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEE
Confidence 12 234579999999999 8899999999999999999987654322
Q ss_pred --------------------------------------------------------------EecccCC-----------
Q 006229 592 --------------------------------------------------------------TLEEHTQ----------- 598 (655)
Q Consensus 592 --------------------------------------------------------------tl~gH~~----------- 598 (655)
.+.+|..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (368)
T 3mmy_A 194 VYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDI 273 (368)
T ss_dssp EEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEE
T ss_pred EEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccc
Confidence 2233443
Q ss_pred -CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 599 -WITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 599 -~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
.|++++|+|++.+|++|+.||.|+|||+++++++..+..|.. .|.+++|+|+
T Consensus 274 ~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-----~v~~~~~s~~ 326 (368)
T 3mmy_A 274 YAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQ-----PISACCFNHN 326 (368)
T ss_dssp CCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSS-----CEEEEEECTT
T ss_pred cceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCC-----CceEEEECCC
Confidence 699999999999999999999999999999999998887654 4567888885
No 67
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.68 E-value=4.3e-16 Score=163.82 Aligned_cols=147 Identities=15% Similarity=0.146 Sum_probs=122.5
Q ss_pred CceeccCCCCceEEEEecCCCCcc----------cccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCC
Q 006229 472 PTLQHNGASSKSLLMFGSDGMGSL----------TSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGK 541 (655)
Q Consensus 472 ~~~~~s~S~d~s~l~ws~dg~~~l----------asss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~ 541 (655)
...+.+++.++.+.+|+..+.... .+....+.+.+.++++|+.|+.|++|+.. +
T Consensus 131 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~--------------- 194 (383)
T 3ei3_B 131 TNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-G--------------- 194 (383)
T ss_dssp EEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-S---------------
T ss_pred CCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-C---------------
Confidence 357778888999999998863211 12233456677899999999999999652 1
Q ss_pred CceeeeEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEeCCC----CeEEEEecccCCCEEEEEEcC-CCCEEEEE
Q 006229 542 GFTFTEFQLIPASTSKVESCHFSPDGK-LLATGGHDKKAVLWCTES----FTVKSTLEEHTQWITDVRFSP-SLSRLATS 615 (655)
Q Consensus 542 ~~t~~~v~~l~gH~~~V~sl~fSpdG~-lLaSgs~DgtVrIWDl~t----~~~l~tl~gH~~~ItsVafsP-dg~~LaSg 615 (655)
.++..+.+|...|.+|+|+|+++ +|++|+.|++|+|||+++ +.++..+ +|...|++|+|+| ++.+|+++
T Consensus 195 ----~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~ 269 (383)
T 3ei3_B 195 ----HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTT 269 (383)
T ss_dssp ----CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEE
T ss_pred ----CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEE
Confidence 35677789999999999999999 999999999999999987 6677777 7999999999999 99999999
Q ss_pred eCCCcEEEEECCCCeEEEEEeccc
Q 006229 616 SADRTVRVWDTENVRKLTFICCYK 639 (655)
Q Consensus 616 S~DgtVrVWDl~tg~~v~~l~~~~ 639 (655)
+.|++|+|||+++++++..+..+.
T Consensus 270 ~~d~~i~iwd~~~~~~~~~~~~~~ 293 (383)
T 3ei3_B 270 DQRNEIRVYSSYDWSKPDQIIIHP 293 (383)
T ss_dssp ESSSEEEEEETTBTTSCSEEEECC
T ss_pred cCCCcEEEEECCCCcccccccccc
Confidence 999999999999998887777554
No 68
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.68 E-value=1.2e-15 Score=157.72 Aligned_cols=140 Identities=18% Similarity=0.203 Sum_probs=114.7
Q ss_pred CCCCceEEEEecCCCCcccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCC
Q 006229 478 GASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSK 557 (655)
Q Consensus 478 ~S~d~s~l~ws~dg~~~lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~ 557 (655)
......++.|++++. +|++|+.|++|++|+.... +...+..+.+|...
T Consensus 10 h~~~v~~~~~s~~~~---------------~l~~~~~dg~i~iw~~~~~-----------------~~~~~~~~~~h~~~ 57 (379)
T 3jrp_A 10 HNELIHDAVLDYYGK---------------RLATCSSDKTIKIFEVEGE-----------------THKLIDTLTGHEGP 57 (379)
T ss_dssp CCCCEEEEEECSSSS---------------EEEEEETTSCEEEEEEETT-----------------EEEEEEEECCCSSC
T ss_pred CcccEEEEEEcCCCC---------------EEEEEECCCcEEEEecCCC-----------------cceeeeEecCCCCc
Confidence 344566777777554 8899999999999965322 23567788899999
Q ss_pred eeEEEEcCC--CCEEEEEeCCCcEEEEeCCCCe--EEEEecccCCCEEEEEEcCC--CCEEEEEeCCCcEEEEECCCCeE
Q 006229 558 VESCHFSPD--GKLLATGGHDKKAVLWCTESFT--VKSTLEEHTQWITDVRFSPS--LSRLATSSADRTVRVWDTENVRK 631 (655)
Q Consensus 558 V~sl~fSpd--G~lLaSgs~DgtVrIWDl~t~~--~l~tl~gH~~~ItsVafsPd--g~~LaSgS~DgtVrVWDl~tg~~ 631 (655)
|++++|+++ +++|++|+.|++|+|||+++++ .+..+.+|...|++|+|+|+ +.+|++++.|++|+|||++++..
T Consensus 58 v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 137 (379)
T 3jrp_A 58 VWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT 137 (379)
T ss_dssp EEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC
T ss_pred EEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc
Confidence 999999987 9999999999999999999987 78888899999999999999 99999999999999999998743
Q ss_pred --EEEEecccceeeeeceeeEEEec
Q 006229 632 --LTFICCYKCIFVSTAIGSCFFAP 654 (655)
Q Consensus 632 --v~~l~~~~~~v~s~~Vss~~F~P 654 (655)
...+..|.. .|.+++|+|
T Consensus 138 ~~~~~~~~~~~-----~v~~~~~~~ 157 (379)
T 3jrp_A 138 TSPIIIDAHAI-----GVNSASWAP 157 (379)
T ss_dssp CCEEEEECCTT-----CEEEEEECC
T ss_pred eeeEEecCCCC-----ceEEEEEcC
Confidence 334444543 355677776
No 69
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.68 E-value=1.1e-15 Score=159.61 Aligned_cols=158 Identities=16% Similarity=0.264 Sum_probs=116.2
Q ss_pred CCceeccCCCCceEEEEecCCCCcc---------------------cccCcccCC-CCcEEEeccCCCcEEEEecCCCC-
Q 006229 471 RPTLQHNGASSKSLLMFGSDGMGSL---------------------TSAPNQLTD-MDRFVDDGSLDDNVESFLSPDDA- 527 (655)
Q Consensus 471 ~~~~~~s~S~d~s~l~ws~dg~~~l---------------------asss~~l~~-~~~~LasGS~D~tV~vW~s~d~~- 527 (655)
....+++++.++.+.+|+.+..... .+....+.+ ...++++++.|+.|++|+...+.
T Consensus 55 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 134 (408)
T 4a11_B 55 EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQT 134 (408)
T ss_dssp TCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcc
Confidence 3456677777888888887652111 111223344 44678888888888888765442
Q ss_pred ---------------------------CCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCcE
Q 006229 528 ---------------------------DPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGK-LLATGGHDKKA 579 (655)
Q Consensus 528 ---------------------------d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~-lLaSgs~DgtV 579 (655)
...+..+.+|+...+ ..+..+.+|...|.+++|+|+++ +|++|+.|+.|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i 211 (408)
T 4a11_B 135 ADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG---SCSHILQGHRQEILAVSWSPRYDYILATASADSRV 211 (408)
T ss_dssp EEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS---CCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCE
T ss_pred ceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc---ceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcE
Confidence 011233455555544 45667789999999999999998 69999999999
Q ss_pred EEEeCCCCe-EEEEe---------------cccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeE
Q 006229 580 VLWCTESFT-VKSTL---------------EEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRK 631 (655)
Q Consensus 580 rIWDl~t~~-~l~tl---------------~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~ 631 (655)
++||++++. ++..+ .+|...|++++|+|++.+|++++.|+.|+|||+++++.
T Consensus 212 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 212 KLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGEN 279 (408)
T ss_dssp EEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCB
T ss_pred EEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCcc
Confidence 999998765 44444 57999999999999999999999999999999987543
No 70
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.68 E-value=1.1e-15 Score=158.19 Aligned_cols=164 Identities=15% Similarity=0.212 Sum_probs=126.8
Q ss_pred CCCceeccCCCCceEEEEecCCCC----------cccccCcccCCC--CcEEEeccCCCcEEEEecCCCCCCCCcccccc
Q 006229 470 SRPTLQHNGASSKSLLMFGSDGMG----------SLTSAPNQLTDM--DRFVDDGSLDDNVESFLSPDDADPRDRVGRSA 537 (655)
Q Consensus 470 s~~~~~~s~S~d~s~l~ws~dg~~----------~lasss~~l~~~--~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~ 537 (655)
++...+++++.++.+.+|+.+... .-.+....+... +.+|++|+.|+.|++|+...+
T Consensus 21 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~----------- 89 (379)
T 3jrp_A 21 YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG----------- 89 (379)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETT-----------
T ss_pred CCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCC-----------
Confidence 344677788889999999886311 111122233333 689999999999999965443
Q ss_pred ccCCCceeeeEEeecCCCCCeeEEEEcCC--CCEEEEEeCCCcEEEEeCCCC--eEEEEecccCCCEEEEEEcC------
Q 006229 538 EVGKGFTFTEFQLIPASTSKVESCHFSPD--GKLLATGGHDKKAVLWCTESF--TVKSTLEEHTQWITDVRFSP------ 607 (655)
Q Consensus 538 d~~~~~t~~~v~~l~gH~~~V~sl~fSpd--G~lLaSgs~DgtVrIWDl~t~--~~l~tl~gH~~~ItsVafsP------ 607 (655)
....+..+..|...|.+++|+|+ +.+|++++.|++|+|||+++. .....+.+|...|++++|+|
T Consensus 90 ------~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 163 (379)
T 3jrp_A 90 ------RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 163 (379)
T ss_dssp ------EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----
T ss_pred ------ceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccc
Confidence 12466778889999999999999 999999999999999999887 34556789999999999999
Q ss_pred -------CCCEEEEEeCCCcEEEEECCCCe----EEEEEecccceeeeeceeeEEEecC
Q 006229 608 -------SLSRLATSSADRTVRVWDTENVR----KLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 608 -------dg~~LaSgS~DgtVrVWDl~tg~----~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
++.+|++++.|++|+|||++++. ++..+..|.. .|.+++|+|+
T Consensus 164 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~-----~v~~~~~sp~ 217 (379)
T 3jrp_A 164 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD-----WVRDVAWSPT 217 (379)
T ss_dssp ------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS-----CEEEEEECCC
T ss_pred ccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccC-----cEeEEEECCC
Confidence 69999999999999999998764 4455555544 3557788875
No 71
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.68 E-value=3.8e-16 Score=166.17 Aligned_cols=128 Identities=18% Similarity=0.222 Sum_probs=107.0
Q ss_pred EEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEeCCC
Q 006229 508 FVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSP-DGKLLATGGHDKKAVLWCTES 586 (655)
Q Consensus 508 ~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSp-dG~lLaSgs~DgtVrIWDl~t 586 (655)
++++++.|+.|++|+..... .....+..+.+|.+.|++++|+| ++++|++|+.|++|+|||+.+
T Consensus 49 ~~~~~~~~g~i~v~~~~~~~---------------~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~ 113 (402)
T 2aq5_A 49 LICEASGGGAFLVLPLGKTG---------------RVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPD 113 (402)
T ss_dssp EEBCCSSSCCEEEEETTCCE---------------ECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCT
T ss_pred EEEEEcCCCEEEEEECccCC---------------CCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccC
Confidence 45678899999999654321 01123445678999999999999 999999999999999999998
Q ss_pred C-------eEEEEecccCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCeEEEEE--ecccceeeeeceeeEEEecC
Q 006229 587 F-------TVKSTLEEHTQWITDVRFSPSL-SRLATSSADRTVRVWDTENVRKLTFI--CCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 587 ~-------~~l~tl~gH~~~ItsVafsPdg-~~LaSgS~DgtVrVWDl~tg~~v~~l--~~~~~~v~s~~Vss~~F~P~ 655 (655)
+ +++..+.+|...|++|+|+|++ .+|++++.|++|+|||+++++++..+ ..|.. .|.+++|+|+
T Consensus 114 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-----~v~~~~~~~~ 187 (402)
T 2aq5_A 114 GGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPD-----TIYSVDWSRD 187 (402)
T ss_dssp TCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCS-----CEEEEEECTT
T ss_pred CCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCC-----ceEEEEECCC
Confidence 7 6788999999999999999998 69999999999999999999999888 55654 3557778774
No 72
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.67 E-value=1.3e-15 Score=164.28 Aligned_cols=96 Identities=20% Similarity=0.326 Sum_probs=87.9
Q ss_pred eEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 006229 547 EFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDT 626 (655)
Q Consensus 547 ~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl 626 (655)
.+..+.+|...|.++ ++++.+|++|+.|++|++||+++++++..+.+|...|++++|+|++.+|++|+.|++|+|||+
T Consensus 262 ~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~ 339 (464)
T 3v7d_B 262 FVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDL 339 (464)
T ss_dssp EEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred EEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 366788999998887 567999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEecccceeee
Q 006229 627 ENVRKLTFICCYKCIFVS 644 (655)
Q Consensus 627 ~tg~~v~~l~~~~~~v~s 644 (655)
++++++..+.+|...+.+
T Consensus 340 ~~~~~~~~~~~h~~~v~~ 357 (464)
T 3v7d_B 340 ENGELMYTLQGHTALVGL 357 (464)
T ss_dssp TTTEEEEEECCCSSCEEE
T ss_pred CCCcEEEEEeCCCCcEEE
Confidence 999999999888765543
No 73
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.67 E-value=4.2e-16 Score=185.77 Aligned_cols=169 Identities=10% Similarity=-0.020 Sum_probs=129.4
Q ss_pred CCCceeccCCCCceEEEEecCCCCc-------------------ccccCcccCCCCcEEEeccCCCcEEEEecCCCCCC-
Q 006229 470 SRPTLQHNGASSKSLLMFGSDGMGS-------------------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADP- 529 (655)
Q Consensus 470 s~~~~~~s~S~d~s~l~ws~dg~~~-------------------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~- 529 (655)
++..++++++.|+++.+|+...... ..+....|.+.+++|++|+.|++|++|+...+...
T Consensus 445 pdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~ 524 (902)
T 2oaj_A 445 EYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYS 524 (902)
T ss_dssp SEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC--
T ss_pred ccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccC
Confidence 4457889999999999999865311 12334467888899999999999999977554210
Q ss_pred -------CCccc---------------cccccCC---CceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeC
Q 006229 530 -------RDRVG---------------RSAEVGK---GFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCT 584 (655)
Q Consensus 530 -------~d~~~---------------~l~d~~~---~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl 584 (655)
....+ .+..... ...+.++..+.+|.+.|++|+||||| +||+|+.|++|+|||+
T Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~ 603 (902)
T 2oaj_A 525 VENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDR 603 (902)
T ss_dssp -------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEET
T ss_pred ccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEEC
Confidence 00000 0000000 01245678889999999999999999 9999999999999999
Q ss_pred CCCeEEE-----Eec-ccCCCEEEEEEc-----CCC---CEEEEEeCCCcEEEEEC---CCCeEEEEEeccc
Q 006229 585 ESFTVKS-----TLE-EHTQWITDVRFS-----PSL---SRLATSSADRTVRVWDT---ENVRKLTFICCYK 639 (655)
Q Consensus 585 ~t~~~l~-----tl~-gH~~~ItsVafs-----Pdg---~~LaSgS~DgtVrVWDl---~tg~~v~~l~~~~ 639 (655)
++...+. .+. +|+..|++|+|+ ||| .+|++|+.|++|++||+ .+|+++..+.+|.
T Consensus 604 ~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~ 675 (902)
T 2oaj_A 604 RGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDIT 675 (902)
T ss_dssp TTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEE
T ss_pred CCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEecCce
Confidence 9887764 233 899999999999 885 89999999999999999 7899998888775
No 74
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.67 E-value=1.6e-15 Score=161.77 Aligned_cols=156 Identities=13% Similarity=0.172 Sum_probs=128.3
Q ss_pred eeccCCCCceEEEEecCCCCc---------ccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCce
Q 006229 474 LQHNGASSKSLLMFGSDGMGS---------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFT 544 (655)
Q Consensus 474 ~~~s~S~d~s~l~ws~dg~~~---------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t 544 (655)
.+.+++.++.+.+|+.+.... -.+....+.+.+.+|++|+.|+.|++|+..++
T Consensus 105 ~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~------------------ 166 (401)
T 4aez_A 105 NVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ------------------ 166 (401)
T ss_dssp SEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC------------------
T ss_pred CEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC------------------
Confidence 355666788999998875321 11223355667789999999999999966543
Q ss_pred eeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCC-CCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEE
Q 006229 545 FTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTE-SFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRV 623 (655)
Q Consensus 545 ~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~-t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrV 623 (655)
..+..+.+|...|.+++| ++++|++|+.|++|++||++ ....+..+.+|...|++++|+|++.+|++|+.|++|+|
T Consensus 167 -~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~i 243 (401)
T 4aez_A 167 -TKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQI 243 (401)
T ss_dssp -CEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred -eEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEE
Confidence 456777899999999999 46899999999999999998 56788899999999999999999999999999999999
Q ss_pred EECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 624 WDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 624 WDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
||++++.++..+..|... |.+++|+|+
T Consensus 244 wd~~~~~~~~~~~~~~~~-----v~~~~~~p~ 270 (401)
T 4aez_A 244 WDARSSIPKFTKTNHNAA-----VKAVAWCPW 270 (401)
T ss_dssp EETTCSSEEEEECCCSSC-----CCEEEECTT
T ss_pred ccCCCCCccEEecCCcce-----EEEEEECCC
Confidence 999999999888776543 557778773
No 75
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.67 E-value=1.2e-15 Score=154.59 Aligned_cols=152 Identities=22% Similarity=0.262 Sum_probs=108.6
Q ss_pred eeccCCCCceEEEEecCCCCcc---------cccCcccCCCCcEEEeccCCCcEEEEecCCCCC----------------
Q 006229 474 LQHNGASSKSLLMFGSDGMGSL---------TSAPNQLTDMDRFVDDGSLDDNVESFLSPDDAD---------------- 528 (655)
Q Consensus 474 ~~~s~S~d~s~l~ws~dg~~~l---------asss~~l~~~~~~LasGS~D~tV~vW~s~d~~d---------------- 528 (655)
.+.+++.+.....|........ ......+...+.++++++.|++|++|+...+..
T Consensus 121 ~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~ 200 (318)
T 4ggc_A 121 ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVK 200 (318)
T ss_dssp EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEE
T ss_pred EEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceE
Confidence 4455555556666555432111 111223455667888999999999997765431
Q ss_pred -----------------CCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEe--CCCcEEEEeCCCCeE
Q 006229 529 -----------------PRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGG--HDKKAVLWCTESFTV 589 (655)
Q Consensus 529 -----------------~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs--~DgtVrIWDl~t~~~ 589 (655)
..+..+++|+..... . .....+...|.++.|++++..+++++ .|++|+|||++++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~---~-~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~ 276 (318)
T 4ggc_A 201 AVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA---C-LSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK 276 (318)
T ss_dssp EEEECTTSTTEEEEEECTTTCEEEEEETTTCC---E-EEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE
T ss_pred EEEecCCCCcEEEEEecCCCCEEEEEeccccc---c-cccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcE
Confidence 111223444443331 1 22234667899999999999877765 799999999999999
Q ss_pred EEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q 006229 590 KSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENV 629 (655)
Q Consensus 590 l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg 629 (655)
+.++.+|.+.|++|+|+|++.+|+|||.|++|||||+.+.
T Consensus 277 ~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 277 VAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred EEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 9999999999999999999999999999999999999764
No 76
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.67 E-value=8.3e-16 Score=166.22 Aligned_cols=139 Identities=12% Similarity=0.082 Sum_probs=108.2
Q ss_pred CCceEEEEecCCCCcccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCee
Q 006229 480 SSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVE 559 (655)
Q Consensus 480 ~d~s~l~ws~dg~~~lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~ 559 (655)
...+++.|+|... .+|++|+.|++|++|+...+. ...+..+.+|.+.|+
T Consensus 120 ~~V~~l~~~P~~~--------------~~lasGs~dg~i~lWd~~~~~-----------------~~~~~~~~gH~~~V~ 168 (435)
T 4e54_B 120 RRATSLAWHPTHP--------------STVAVGSKGGDIMLWNFGIKD-----------------KPTFIKGIGAGGSIT 168 (435)
T ss_dssp SCEEEEEECSSCT--------------TCEEEEETTSCEEEECSSCCS-----------------CCEEECCCSSSCCCC
T ss_pred CCEEEEEEeCCCC--------------CEEEEEeCCCEEEEEECCCCC-----------------ceeEEEccCCCCCEE
Confidence 3467788877443 589999999999999654431 123445678999999
Q ss_pred EEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEecc--cCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEe
Q 006229 560 SCHFSP-DGKLLATGGHDKKAVLWCTESFTVKSTLEE--HTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFIC 636 (655)
Q Consensus 560 sl~fSp-dG~lLaSgs~DgtVrIWDl~t~~~l~tl~g--H~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~ 636 (655)
+|+|+| ++.+|+||+.|++|+|||+++......... +...|.+++|+|++.+|++|+.||+|+|||++. +++..+.
T Consensus 169 ~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~ 247 (435)
T 4e54_B 169 GLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLR 247 (435)
T ss_dssp EEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSB
T ss_pred EEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEe
Confidence 999998 789999999999999999987655444433 345688999999999999999999999999974 5566666
Q ss_pred cccceeeeeceeeEEEecC
Q 006229 637 CYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 637 ~~~~~v~s~~Vss~~F~P~ 655 (655)
+|... |.+++|+|+
T Consensus 248 ~h~~~-----v~~v~~~p~ 261 (435)
T 4e54_B 248 MHKKK-----VTHVALNPC 261 (435)
T ss_dssp CCSSC-----EEEEEECTT
T ss_pred cccce-----EEeeeecCC
Confidence 66543 456777774
No 77
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.67 E-value=1.1e-15 Score=164.15 Aligned_cols=162 Identities=21% Similarity=0.239 Sum_probs=115.9
Q ss_pred ceeccCCCCceEEEEecCCCCcc---------cccCcccCCCCcEEEeccCCCcEEEEecCCCC----------------
Q 006229 473 TLQHNGASSKSLLMFGSDGMGSL---------TSAPNQLTDMDRFVDDGSLDDNVESFLSPDDA---------------- 527 (655)
Q Consensus 473 ~~~~s~S~d~s~l~ws~dg~~~l---------asss~~l~~~~~~LasGS~D~tV~vW~s~d~~---------------- 527 (655)
..+.+++.+..+..|+....... .+....+.+.+.++++++.|+.|++|+...+.
T Consensus 200 ~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V 279 (420)
T 4gga_A 200 YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAV 279 (420)
T ss_dssp TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCE
T ss_pred CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCce
Confidence 45666667777777765542211 11122345556778888888888888655432
Q ss_pred -----------------CCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEe--CCCcEEEEeCCCCe
Q 006229 528 -----------------DPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGG--HDKKAVLWCTESFT 588 (655)
Q Consensus 528 -----------------d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs--~DgtVrIWDl~t~~ 588 (655)
...|..+++|++.++ .++..+..| ..|.++.|+++++.|++++ .|++|+|||+.+++
T Consensus 280 ~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~---~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~ 355 (420)
T 4gga_A 280 KAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG---ACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA 355 (420)
T ss_dssp EEEEECTTCTTEEEEEECTTTCEEEEEETTTT---EEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC
T ss_pred eeeeeCCCcccEEEEEeecCCCEEEEEeCCcc---ccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc
Confidence 112344566666655 444455444 5689999999999888765 79999999999999
Q ss_pred EEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecc
Q 006229 589 VKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCY 638 (655)
Q Consensus 589 ~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~ 638 (655)
++.+|.+|.+.|++|+|+|+|.+|+|||.|++|||||+.+..+......+
T Consensus 356 ~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~ 405 (420)
T 4gga_A 356 KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRRERE 405 (420)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC------
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhc
Confidence 99999999999999999999999999999999999999877665554433
No 78
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.67 E-value=2.5e-15 Score=154.33 Aligned_cols=134 Identities=22% Similarity=0.306 Sum_probs=112.4
Q ss_pred cCCCCceEEEEecCCCCcccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCC
Q 006229 477 NGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTS 556 (655)
Q Consensus 477 s~S~d~s~l~ws~dg~~~lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~ 556 (655)
.......++.|+++.. .+.+|++|+.|+.|++|+..+.. ......+.+|..
T Consensus 37 ~h~~~v~~~~~~~~~~------------~g~~l~~~~~dg~i~iw~~~~~~-----------------~~~~~~~~~h~~ 87 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTL------------PGNFLIAGSWANDVRCWEVQDSG-----------------QTIPKAQQMHTG 87 (368)
T ss_dssp CCSSCEEEEEECCTTS------------SSEEEEEEETTSEEEEEEECTTS-----------------CEEEEEEEECSS
T ss_pred CCCCceEEEEEcCCCC------------CceEEEEECCCCcEEEEEcCCCC-----------------ceeEEEeccccC
Confidence 3445677888888641 02589999999999999765421 123366778999
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEE--cCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q 006229 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRF--SPSLSRLATSSADRTVRVWDTENVRKLTF 634 (655)
Q Consensus 557 ~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVaf--sPdg~~LaSgS~DgtVrVWDl~tg~~v~~ 634 (655)
.|.+|+|+|++++|++|+.|++|+|||+++++++. +.+|...|++++| +|++.+|++++.|++|+|||+++++++..
T Consensus 88 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 166 (368)
T 3mmy_A 88 PVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMV 166 (368)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEE
T ss_pred CEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEE
Confidence 99999999999999999999999999999998876 5679999999999 89999999999999999999999999888
Q ss_pred Eecccc
Q 006229 635 ICCYKC 640 (655)
Q Consensus 635 l~~~~~ 640 (655)
+..+..
T Consensus 167 ~~~~~~ 172 (368)
T 3mmy_A 167 LQLPER 172 (368)
T ss_dssp EECSSC
T ss_pred EecCCC
Confidence 877654
No 79
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.66 E-value=1.5e-15 Score=175.23 Aligned_cols=138 Identities=17% Similarity=0.212 Sum_probs=119.3
Q ss_pred CCCCceEEEEecCCCCcccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCC
Q 006229 478 GASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSK 557 (655)
Q Consensus 478 ~S~d~s~l~ws~dg~~~lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~ 557 (655)
.+....++.|+|++. +|++|+.|++|++|+..++ ..+..+.+|...
T Consensus 12 h~~~v~~i~~sp~~~---------------~la~~~~~g~v~iwd~~~~-------------------~~~~~~~~~~~~ 57 (814)
T 3mkq_A 12 RSDRVKGIDFHPTEP---------------WVLTTLYSGRVEIWNYETQ-------------------VEVRSIQVTETP 57 (814)
T ss_dssp ECSCEEEEEECSSSS---------------EEEEEETTSEEEEEETTTT-------------------EEEEEEECCSSC
T ss_pred CCCceEEEEECCCCC---------------EEEEEeCCCEEEEEECCCC-------------------ceEEEEecCCCc
Confidence 344567777777654 8899999999999976544 467778899999
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-eEEEEEe
Q 006229 558 VESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENV-RKLTFIC 636 (655)
Q Consensus 558 V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg-~~v~~l~ 636 (655)
|.+++|+|++++|++|+.|++|+|||+.+++.+.++.+|...|++++|+|++.+|++++.|++|+|||++++ .+...+.
T Consensus 58 v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 137 (814)
T 3mkq_A 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE 137 (814)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE
T ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999987 6677777
Q ss_pred cccceeeeeceeeEEEec
Q 006229 637 CYKCIFVSTAIGSCFFAP 654 (655)
Q Consensus 637 ~~~~~v~s~~Vss~~F~P 654 (655)
.|... |.+++|+|
T Consensus 138 ~~~~~-----v~~~~~~p 150 (814)
T 3mkq_A 138 GHEHF-----VMCVAFNP 150 (814)
T ss_dssp CCSSC-----EEEEEEET
T ss_pred CCCCc-----EEEEEEEc
Confidence 77654 44667776
No 80
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.66 E-value=3.9e-15 Score=160.58 Aligned_cols=158 Identities=16% Similarity=0.241 Sum_probs=126.9
Q ss_pred eeccCCCCceEEEEecCCCCcc--------cccCcccC--CCCcEEEeccCCCcEEEEecCCCCC---------------
Q 006229 474 LQHNGASSKSLLMFGSDGMGSL--------TSAPNQLT--DMDRFVDDGSLDDNVESFLSPDDAD--------------- 528 (655)
Q Consensus 474 ~~~s~S~d~s~l~ws~dg~~~l--------asss~~l~--~~~~~LasGS~D~tV~vW~s~d~~d--------------- 528 (655)
.+.+++.++.+.+|+.+....+ .+....+. +.+.++++|+.|++|++|+......
T Consensus 175 ~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 254 (464)
T 3v7d_B 175 ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFH 254 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEES
T ss_pred EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEee
Confidence 6778888999999998753211 11111222 3457899999999999997765431
Q ss_pred --------------------------------CCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCC
Q 006229 529 --------------------------------PRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHD 576 (655)
Q Consensus 529 --------------------------------~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~D 576 (655)
..+..+++|+..++ +++..+.+|...|.+++|+|++++|++|+.|
T Consensus 255 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~d 331 (464)
T 3v7d_B 255 TPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQM---KCLYILSGHTDRIYSTIYDHERKRCISASMD 331 (464)
T ss_dssp CGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEEETTTTEEEEEETT
T ss_pred ccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCC---cEEEEecCCCCCEEEEEEcCCCCEEEEEeCC
Confidence 12344567776654 6677888999999999999999999999999
Q ss_pred CcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEe
Q 006229 577 KKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFIC 636 (655)
Q Consensus 577 gtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~ 636 (655)
++|+|||+++++++.++.+|...|++++|+ +.+|++++.||+|+|||++++.....+.
T Consensus 332 g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~ 389 (464)
T 3v7d_B 332 TTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH 389 (464)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec
Confidence 999999999999999999999999999997 5899999999999999999988776654
No 81
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.66 E-value=1e-15 Score=161.35 Aligned_cols=160 Identities=14% Similarity=0.191 Sum_probs=126.8
Q ss_pred CceeccCCCCceEEEEecCCCC------ccc-----------ccCcccCCC-CcEEEeccCCCcEEEEecCCCCCCCCcc
Q 006229 472 PTLQHNGASSKSLLMFGSDGMG------SLT-----------SAPNQLTDM-DRFVDDGSLDDNVESFLSPDDADPRDRV 533 (655)
Q Consensus 472 ~~~~~s~S~d~s~l~ws~dg~~------~la-----------sss~~l~~~-~~~LasGS~D~tV~vW~s~d~~d~~d~~ 533 (655)
...+.+++.++.+.+|+..... ... +....+.+. ..++++++.|+.|++|+...+
T Consensus 126 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~------- 198 (416)
T 2pm9_A 126 DNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAK------- 198 (416)
T ss_dssp TTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTT-------
T ss_pred CCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCC-------
Confidence 4567777788888888886543 110 111233444 578999999999999976544
Q ss_pred ccccccCCCceeeeEEeecCC------CCCeeEEEEcCCC-CEEEEEeCCC---cEEEEeCCCC-eEEEEec-ccCCCEE
Q 006229 534 GRSAEVGKGFTFTEFQLIPAS------TSKVESCHFSPDG-KLLATGGHDK---KAVLWCTESF-TVKSTLE-EHTQWIT 601 (655)
Q Consensus 534 ~~l~d~~~~~t~~~v~~l~gH------~~~V~sl~fSpdG-~lLaSgs~Dg---tVrIWDl~t~-~~l~tl~-gH~~~It 601 (655)
+.+..+..| ...|.+++|+|++ .+|++++.|+ +|++||++++ .++..+. +|...|+
T Consensus 199 ------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~ 266 (416)
T 2pm9_A 199 ------------KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGIL 266 (416)
T ss_dssp ------------EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEE
T ss_pred ------------CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCcee
Confidence 334444444 7899999999987 6999999999 9999999986 6777888 9999999
Q ss_pred EEEEcC-CCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 602 DVRFSP-SLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 602 sVafsP-dg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+|+|+| ++.+|++++.|++|+|||+++++++..+..|... |.+++|+|+
T Consensus 267 ~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~-----v~~~~~s~~ 316 (416)
T 2pm9_A 267 SLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNW-----CFKTKFAPE 316 (416)
T ss_dssp EEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSC-----CCCEEECTT
T ss_pred EEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCc-----eEEEEECCC
Confidence 999999 9999999999999999999999999999887653 457788874
No 82
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.66 E-value=1.5e-15 Score=162.15 Aligned_cols=128 Identities=9% Similarity=0.012 Sum_probs=101.0
Q ss_pred CCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCC---CCeeEEEEcCCCCEE---------
Q 006229 503 TDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAST---SKVESCHFSPDGKLL--------- 570 (655)
Q Consensus 503 ~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~---~~V~sl~fSpdG~lL--------- 570 (655)
.+...+|++||.|++|++|+..++ ++++++.+|. ..|.+++|+|||+++
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TG-------------------k~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~ 250 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTG-------------------QLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAK 250 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTC-------------------CEEEEEECCC---CCCEEEEEEETTEEEEEEC-----
T ss_pred CCCCceEEEecCCCcEEEEECCCC-------------------cEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCc
Confidence 446689999999999999977665 4566666543 467888999999976
Q ss_pred ---EEEeCCCcEEEEeCCCCeEEEEe-----cccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEeccccee
Q 006229 571 ---ATGGHDKKAVLWCTESFTVKSTL-----EEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIF 642 (655)
Q Consensus 571 ---aSgs~DgtVrIWDl~t~~~l~tl-----~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v 642 (655)
++|+.|++|++||..+++++.++ .+|...+.+.+++ +.++++++.|++|||||+.+++++.++.+|...+
T Consensus 251 w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~v 328 (356)
T 2w18_A 251 ESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQH 328 (356)
T ss_dssp -------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CC
T ss_pred ceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCe
Confidence 66889999999999999988776 4888777666665 8899999999999999999999999998776433
Q ss_pred eeeceeeEEEecC
Q 006229 643 VSTAIGSCFFAPT 655 (655)
Q Consensus 643 ~s~~Vss~~F~P~ 655 (655)
+.+++|+||
T Consensus 329 ----vs~vafSPD 337 (356)
T 2w18_A 329 ----WSFVKWSGT 337 (356)
T ss_dssp ----CCEEEECSS
T ss_pred ----EEEEEECCC
Confidence 345789986
No 83
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.66 E-value=2.9e-15 Score=151.03 Aligned_cols=156 Identities=16% Similarity=0.164 Sum_probs=123.6
Q ss_pred CceeccCCCCceEEEEecCCCC------cccccCcccCC-CCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCce
Q 006229 472 PTLQHNGASSKSLLMFGSDGMG------SLTSAPNQLTD-MDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFT 544 (655)
Q Consensus 472 ~~~~~s~S~d~s~l~ws~dg~~------~lasss~~l~~-~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t 544 (655)
...+.+++.++.+.+|+..... ...+....+.+ .+.++++++.|+.|++|+.
T Consensus 114 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--------------------- 172 (313)
T 3odt_A 114 DGVVISGSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN--------------------- 172 (313)
T ss_dssp TTEEEEEETTSEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET---------------------
T ss_pred CCEEEEEeCCCCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEec---------------------
Confidence 3467777888899999832210 00111112222 5678899999999999951
Q ss_pred eeeEEeecC-CCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEE
Q 006229 545 FTEFQLIPA-STSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRV 623 (655)
Q Consensus 545 ~~~v~~l~g-H~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrV 623 (655)
...+..+.. |...|.+++|+|++. |++++.|+.|++||+++++++..+.+|...|++++|+|++ .|++++.|++|+|
T Consensus 173 ~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~i 250 (313)
T 3odt_A 173 DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRI 250 (313)
T ss_dssp TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEE
T ss_pred CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEE
Confidence 134455556 889999999999998 9999999999999999999999999999999999999999 6999999999999
Q ss_pred EECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 624 WDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 624 WDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
||+++++++..+..+... |.+++|+|+
T Consensus 251 wd~~~~~~~~~~~~~~~~-----i~~~~~~~~ 277 (313)
T 3odt_A 251 WSKENGSLKQVITLPAIS-----IWSVDCMSN 277 (313)
T ss_dssp ECTTTCCEEEEEECSSSC-----EEEEEECTT
T ss_pred EECCCCceeEEEeccCce-----EEEEEEccC
Confidence 999999999999887643 557778775
No 84
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.66 E-value=1e-15 Score=182.34 Aligned_cols=139 Identities=12% Similarity=0.041 Sum_probs=106.9
Q ss_pred ccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEee-----cCCCCCeeEEEEcCCCCEEEEEeC
Q 006229 501 QLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLI-----PASTSKVESCHFSPDGKLLATGGH 575 (655)
Q Consensus 501 ~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l-----~gH~~~V~sl~fSpdG~lLaSgs~ 575 (655)
.+.+.+++|++|+.|++|++|+...+... ..+ . +. + .+ .+|...|.+|+|+|||++||+|+.
T Consensus 442 ~~spdg~~laSgs~DgtVrlWd~~~g~~~---~~~------~--~~-~-~l~~~~~~~h~~~V~svafspdg~~LAsgs~ 508 (902)
T 2oaj_A 442 LPAEYGTAFITGHSNGSVRIYDASHGDIQ---DNA------S--FE-V-NLSRTLNKAKELAVDKISFAAETLELAVSIE 508 (902)
T ss_dssp CCCSEEEEEEEEETTSEEEEEESSCCTTT---TTB------C--EE-E-EHHHHTTCSSSCCEEEEEEETTTTEEEEEET
T ss_pred cccccCcEEEEecCCCcEEEEECCCcccc---CCc------e--EE-e-echhhcCCCCCCceeEEEecCCCCeEEEEec
Confidence 44556689999999999999987665210 000 0 00 0 11 289999999999999999999999
Q ss_pred CCcEEEEeCCCC---------------------------------------------eEEEEecccCCCEEEEEEcCCCC
Q 006229 576 DKKAVLWCTESF---------------------------------------------TVKSTLEEHTQWITDVRFSPSLS 610 (655)
Q Consensus 576 DgtVrIWDl~t~---------------------------------------------~~l~tl~gH~~~ItsVafsPdg~ 610 (655)
|++|+|||+.++ +++.++.+|.+.|++|+|+|||
T Consensus 509 DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG- 587 (902)
T 2oaj_A 509 TGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG- 587 (902)
T ss_dssp TSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-
T ss_pred CcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-
Confidence 999999999765 3578889999999999999999
Q ss_pred EEEEEeCCCcEEEEECCCCeEEEEEecccce-eeeeceeeEEEe
Q 006229 611 RLATSSADRTVRVWDTENVRKLTFICCYKCI-FVSTAIGSCFFA 653 (655)
Q Consensus 611 ~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~-v~s~~Vss~~F~ 653 (655)
+||+|+.|++|+|||++++..+....+..-. .+...|.+++|+
T Consensus 588 ~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs 631 (902)
T 2oaj_A 588 FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFV 631 (902)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEE
T ss_pred EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEE
Confidence 9999999999999999988876543321111 233446778887
No 85
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.65 E-value=2.6e-15 Score=161.84 Aligned_cols=170 Identities=18% Similarity=0.237 Sum_probs=135.8
Q ss_pred CceeccCCCCceEEEEecCCCCcc------cccCcccCCCCcEEEeccCCCcEEEEecCCCC------------------
Q 006229 472 PTLQHNGASSKSLLMFGSDGMGSL------TSAPNQLTDMDRFVDDGSLDDNVESFLSPDDA------------------ 527 (655)
Q Consensus 472 ~~~~~s~S~d~s~l~ws~dg~~~l------asss~~l~~~~~~LasGS~D~tV~vW~s~d~~------------------ 527 (655)
...+.+++.++.+.+|+....... ......+...+.++++|+.|++|++|+..++.
T Consensus 143 ~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~ 222 (435)
T 1p22_A 143 DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN 222 (435)
T ss_dssp SSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC
T ss_pred CCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc
Confidence 456777888889999987642111 01111223356789999999999999876553
Q ss_pred ------CCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEE
Q 006229 528 ------DPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWIT 601 (655)
Q Consensus 528 ------d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~It 601 (655)
.+.+..+++|+............+.+|...|.+++| ++++|++|+.|++|++||+++++++.++.+|...|+
T Consensus 223 ~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~ 300 (435)
T 1p22_A 223 NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA 300 (435)
T ss_dssp TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEE
Confidence 123455678887776655566788899999999999 789999999999999999999999999999999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeee
Q 006229 602 DVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVST 645 (655)
Q Consensus 602 sVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~ 645 (655)
+++|+ +.+|++|+.|++|+|||+++++++..+..|...+.++
T Consensus 301 ~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~ 342 (435)
T 1p22_A 301 CLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 342 (435)
T ss_dssp EEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred EEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEE
Confidence 99994 7899999999999999999999999999887765544
No 86
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.65 E-value=2.8e-15 Score=181.83 Aligned_cols=137 Identities=23% Similarity=0.367 Sum_probs=119.4
Q ss_pred CCceEEEEecCCCCcccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCee
Q 006229 480 SSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVE 559 (655)
Q Consensus 480 ~d~s~l~ws~dg~~~lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~ 559 (655)
....++.|++++ .++++|+.|++|++|+..++ ..+..+.+|...|.
T Consensus 616 ~~v~~~~~s~~~---------------~~l~s~~~d~~i~vw~~~~~-------------------~~~~~~~~h~~~v~ 661 (1249)
T 3sfz_A 616 DAVYHACFSQDG---------------QRIASCGADKTLQVFKAETG-------------------EKLLDIKAHEDEVL 661 (1249)
T ss_dssp SCEEEEEECTTS---------------SEEEEEETTSCEEEEETTTC-------------------CEEEEECCCSSCEE
T ss_pred ccEEEEEECCCC---------------CEEEEEeCCCeEEEEECCCC-------------------CEEEEeccCCCCEE
Confidence 445566666654 48899999999999976554 46777889999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcC--CCCEEEEEeCCCcEEEEECCCCeEEEEEec
Q 006229 560 SCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSP--SLSRLATSSADRTVRVWDTENVRKLTFICC 637 (655)
Q Consensus 560 sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsP--dg~~LaSgS~DgtVrVWDl~tg~~v~~l~~ 637 (655)
+|+|+|+|++|++|+.|++|+|||+.+++++.++.+|...|++++|+| ++.++++|+.|++|+|||+++++++..+.+
T Consensus 662 ~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~ 741 (1249)
T 3sfz_A 662 CCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFG 741 (1249)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECC
T ss_pred EEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecC
Confidence 999999999999999999999999999999999999999999999999 556899999999999999999999999988
Q ss_pred ccceeeeeceeeEEEecC
Q 006229 638 YKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 638 ~~~~v~s~~Vss~~F~P~ 655 (655)
|... |.+++|+|+
T Consensus 742 h~~~-----v~~~~~sp~ 754 (1249)
T 3sfz_A 742 HTNS-----VNHCRFSPD 754 (1249)
T ss_dssp CSSC-----EEEEEECSS
T ss_pred CCCC-----EEEEEEecC
Confidence 7664 456777774
No 87
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.65 E-value=1.8e-15 Score=158.54 Aligned_cols=159 Identities=11% Similarity=0.058 Sum_probs=128.9
Q ss_pred eeccCCCCceEEEEecCCCCcc--------cccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCcee
Q 006229 474 LQHNGASSKSLLMFGSDGMGSL--------TSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTF 545 (655)
Q Consensus 474 ~~~s~S~d~s~l~ws~dg~~~l--------asss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~ 545 (655)
.+..++.++.+.+|+......+ .+....+.+.+.+|++++.|+.|++|+...+
T Consensus 219 ~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~------------------- 279 (425)
T 1r5m_A 219 KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG------------------- 279 (425)
T ss_dssp EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB-------------------
T ss_pred EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC-------------------
Confidence 4566677888888887653211 1222345666779999999999999955433
Q ss_pred eeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 006229 546 TEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWD 625 (655)
Q Consensus 546 ~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWD 625 (655)
..+..+.+|...|.+++|+|++ +|++++.|+.|+|||+++++++..+..|...|++++|+|++.+|++++.|+.|+|||
T Consensus 280 ~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~ 358 (425)
T 1r5m_A 280 NSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYD 358 (425)
T ss_dssp SCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEE
Confidence 3455667899999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCe--------------------EEEEEecccceeeeeceeeEEEecC
Q 006229 626 TENVR--------------------KLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 626 l~tg~--------------------~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
++++. ++..+..+... ..|.+++|+|+
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~s~~ 405 (425)
T 1r5m_A 359 LKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDN---DYIFDLSWNCA 405 (425)
T ss_dssp CHHHHC--------------CEECCEEEEECCTTCC---CCEEEEEECTT
T ss_pred CCCCccceeeeecccccccCcccchhhhhhcCcccC---CceEEEEccCC
Confidence 99888 78888777431 03567888875
No 88
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.65 E-value=4.5e-16 Score=160.15 Aligned_cols=109 Identities=13% Similarity=0.239 Sum_probs=98.5
Q ss_pred CcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEeC
Q 006229 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSP-DGKLLATGGHDKKAVLWCT 584 (655)
Q Consensus 506 ~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSp-dG~lLaSgs~DgtVrIWDl 584 (655)
+.++++|+.|++|++|+...+ +.+..+.+|...|.+++|+| ++.+|++|+.|++|+|||+
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~-------------------~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~ 145 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITM-------------------QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNI 145 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTC-------------------CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred CCEEEEecCCCEEEEEEchhc-------------------eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEe
Confidence 468999999999999965443 45677789999999999999 9999999999999999999
Q ss_pred CCCeEEEEe---cccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEE
Q 006229 585 ESFTVKSTL---EEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLT 633 (655)
Q Consensus 585 ~t~~~l~tl---~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~ 633 (655)
++++.+..+ .+|...|++++|+|++.+|++++.|++|+|||+++++.+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 197 (366)
T 3k26_A 146 QTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMN 197 (366)
T ss_dssp TTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHH
T ss_pred ecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCcccc
Confidence 999999998 7899999999999999999999999999999999876543
No 89
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.65 E-value=1.6e-15 Score=155.79 Aligned_cols=160 Identities=13% Similarity=0.110 Sum_probs=122.6
Q ss_pred CCceeccCCCCceEEEEecCCCCcccc-------------cCcc----cCCCCcEEEeccCCCcEEEEecCCCCCCCCcc
Q 006229 471 RPTLQHNGASSKSLLMFGSDGMGSLTS-------------APNQ----LTDMDRFVDDGSLDDNVESFLSPDDADPRDRV 533 (655)
Q Consensus 471 ~~~~~~s~S~d~s~l~ws~dg~~~las-------------ss~~----l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~ 533 (655)
....+.+++.++.+.+|+......... .... +.+.+.++++|+.|+.|++|+...+
T Consensus 128 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~------- 200 (357)
T 3i2n_A 128 GAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNM------- 200 (357)
T ss_dssp CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTT-------
T ss_pred CccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccC-------
Confidence 345777888899999998876431110 0111 4567788999999999999966543
Q ss_pred ccccccCCCceeeeEEeecCCCCCeeEEEEcC---CCCEEEEEeCCCcEEEEeCCCCeEEEEec-----ccCCCEEEEEE
Q 006229 534 GRSAEVGKGFTFTEFQLIPASTSKVESCHFSP---DGKLLATGGHDKKAVLWCTESFTVKSTLE-----EHTQWITDVRF 605 (655)
Q Consensus 534 ~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSp---dG~lLaSgs~DgtVrIWDl~t~~~l~tl~-----gH~~~ItsVaf 605 (655)
.. .....|...|.+++|+| ++.+|++|+.|+.|+|||+++++.+..+. +|...|++++|
T Consensus 201 ------------~~-~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~ 267 (357)
T 3i2n_A 201 ------------AL-RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRH 267 (357)
T ss_dssp ------------EE-EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEE
T ss_pred ------------ce-eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEE
Confidence 11 23356788999999999 99999999999999999998776554444 99999999999
Q ss_pred cCCCC-EEEEEeCCCcEEEEECCCC-------------------eEEEEEecccceeeeeceeeEEEecC
Q 006229 606 SPSLS-RLATSSADRTVRVWDTENV-------------------RKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 606 sPdg~-~LaSgS~DgtVrVWDl~tg-------------------~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+|++. +|++++.||.|+|||++++ .++..+..|.. .|.+++|+|+
T Consensus 268 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~v~~~~~s~~ 332 (357)
T 3i2n_A 268 LPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQ-----PISSLDWSPD 332 (357)
T ss_dssp ETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSS-----CEEEEEECSS
T ss_pred CCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCC-----CeeEEEEcCC
Confidence 99998 8999999999999999854 35666666644 4567888875
No 90
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.65 E-value=5.9e-15 Score=150.00 Aligned_cols=129 Identities=18% Similarity=0.221 Sum_probs=106.4
Q ss_pred CCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEe--ecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEE
Q 006229 505 MDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQL--IPASTSKVESCHFSPDGKLLATGGHDKKAVLW 582 (655)
Q Consensus 505 ~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~--l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIW 582 (655)
.++++++++ |+.|++|+...+.. ...+.. ..+|...|.+++|+|++++|++++.|++|++|
T Consensus 62 ~~~~l~~~~-dg~i~iw~~~~~~~----------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 124 (337)
T 1gxr_A 62 PTRHVYTGG-KGCVKVWDISHPGN----------------KSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124 (337)
T ss_dssp SSSEEEEEC-BSEEEEEETTSTTC----------------CSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEE
T ss_pred CCcEEEEcC-CCeEEEEECCCCCc----------------eeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 345888888 99999997655421 111222 23788999999999999999999999999999
Q ss_pred eCCCCe--EEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 583 CTESFT--VKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 583 Dl~t~~--~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
|+++++ ....+.+|...|++++|+|++.+|++++.|+.|++||+++++.+..+..|... +.+++|+|+
T Consensus 125 d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~-----i~~~~~~~~ 194 (337)
T 1gxr_A 125 DLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG-----ASCIDISND 194 (337)
T ss_dssp ECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC-----EEEEEECTT
T ss_pred ECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCc-----eEEEEECCC
Confidence 999887 67788899999999999999999999999999999999999999988877654 456777764
No 91
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.65 E-value=3.7e-15 Score=158.89 Aligned_cols=161 Identities=17% Similarity=0.258 Sum_probs=127.2
Q ss_pred CCceeccCCCCceEEEEecCCCCcccc------cCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCce
Q 006229 471 RPTLQHNGASSKSLLMFGSDGMGSLTS------APNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFT 544 (655)
Q Consensus 471 ~~~~~~s~S~d~s~l~ws~dg~~~las------ss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t 544 (655)
+...+.+++.++.+.+|+......+.. ....+....+++++|+.|++|++|+....
T Consensus 145 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~------------------ 206 (401)
T 4aez_A 145 DGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIA------------------ 206 (401)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSS------------------
T ss_pred CCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccC------------------
Confidence 445677777888999998765322111 01112224578999999999999966532
Q ss_pred eeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCC-CEEEEEe--CCCcE
Q 006229 545 FTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSL-SRLATSS--ADRTV 621 (655)
Q Consensus 545 ~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg-~~LaSgS--~DgtV 621 (655)
...+..+.+|...|.+++|+|++++|++|+.|++|+|||+++++++.++.+|...|++++|+|++ .++++++ .|++|
T Consensus 207 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i 286 (401)
T 4aez_A 207 NHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQI 286 (401)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEE
T ss_pred cceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEE
Confidence 13566778999999999999999999999999999999999999999999999999999999976 4666665 79999
Q ss_pred EEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 622 RVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 622 rVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
++||+++++++..+..+. .+.+++|+|+
T Consensus 287 ~i~d~~~~~~~~~~~~~~------~v~~~~~s~~ 314 (401)
T 4aez_A 287 HFWNAATGARVNTVDAGS------QVTSLIWSPH 314 (401)
T ss_dssp EEEETTTCCEEEEEECSS------CEEEEEECSS
T ss_pred EEEECCCCCEEEEEeCCC------cEEEEEECCC
Confidence 999999999998886443 3567888874
No 92
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.65 E-value=5e-15 Score=152.33 Aligned_cols=146 Identities=14% Similarity=0.167 Sum_probs=112.9
Q ss_pred CCCCceEEEEecCCCCcccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEee--cCCC
Q 006229 478 GASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLI--PAST 555 (655)
Q Consensus 478 ~S~d~s~l~ws~dg~~~lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l--~gH~ 555 (655)
.......+.|+|+.. +.+..+++++.++.|++|+...+. ....+..+ ..|.
T Consensus 17 h~~~v~~i~~~p~~~-----------~~~~~~~~~~~~~~v~vw~~~~~~----------------~~~~~~~~~~~~~~ 69 (366)
T 3k26_A 17 HNQPLFGVQFNWHSK-----------EGDPLVFATVGSNRVTLYECHSQG----------------EIRLLQSYVDADAD 69 (366)
T ss_dssp TCSCEEEEEECTTCC-----------TTSCEEEEEEETTEEEEEEECGGG----------------CEEEEEEEECSCTT
T ss_pred CCCceEEEEEecccC-----------CCCceEEEECCCCEEEEEEcCCCc----------------EEEeeeeccccCCC
Confidence 344667777887521 112445555566799999665431 11222222 2377
Q ss_pred CCeeEEEEcCC----CCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCe
Q 006229 556 SKVESCHFSPD----GKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSP-SLSRLATSSADRTVRVWDTENVR 630 (655)
Q Consensus 556 ~~V~sl~fSpd----G~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsP-dg~~LaSgS~DgtVrVWDl~tg~ 630 (655)
..|++++|+|+ +.+|++|+.|++|+|||+.+++++..+.+|...|++|+|+| ++.+|++|+.|++|+|||+++++
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 149 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT 149 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTE
T ss_pred CcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCe
Confidence 88999999998 67999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred EEEEE---ecccceeeeeceeeEEEecC
Q 006229 631 KLTFI---CCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 631 ~v~~l---~~~~~~v~s~~Vss~~F~P~ 655 (655)
++..+ ..|.. .|.+++|+|+
T Consensus 150 ~~~~~~~~~~~~~-----~v~~~~~~~~ 172 (366)
T 3k26_A 150 LVAIFGGVEGHRD-----EVLSADYDLL 172 (366)
T ss_dssp EEEEECSTTSCSS-----CEEEEEECTT
T ss_pred EEEEecccccccC-----ceeEEEECCC
Confidence 99888 44443 4567788774
No 93
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.65 E-value=3.8e-15 Score=160.94 Aligned_cols=166 Identities=20% Similarity=0.217 Sum_probs=127.2
Q ss_pred ceeccCCCCceEEEEecCCC---------Cc-c--------cccCcccCCCCc-EEEeccCCCcEEEEecCCCCCCCCcc
Q 006229 473 TLQHNGASSKSLLMFGSDGM---------GS-L--------TSAPNQLTDMDR-FVDDGSLDDNVESFLSPDDADPRDRV 533 (655)
Q Consensus 473 ~~~~s~S~d~s~l~ws~dg~---------~~-l--------asss~~l~~~~~-~LasGS~D~tV~vW~s~d~~d~~d~~ 533 (655)
.++++++.++.+.+|+.... .. + .+....+.+.+. +|++|+.|++|++|+...+..
T Consensus 142 ~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~----- 216 (430)
T 2xyi_A 142 CVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPK----- 216 (430)
T ss_dssp EEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCB-----
T ss_pred cEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCC-----
Confidence 56777777888888887641 11 0 112223444445 899999999999997665311
Q ss_pred ccccccCCCceeeeEEeecCCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEeCCCC---eEEEEecccCCCEEEEEEcCCC
Q 006229 534 GRSAEVGKGFTFTEFQLIPASTSKVESCHFSP-DGKLLATGGHDKKAVLWCTESF---TVKSTLEEHTQWITDVRFSPSL 609 (655)
Q Consensus 534 ~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSp-dG~lLaSgs~DgtVrIWDl~t~---~~l~tl~gH~~~ItsVafsPdg 609 (655)
..........+.+|...|.+|+|+| ++.+|++++.|+.|+|||++++ +.+..+.+|...|++|+|+|++
T Consensus 217 -------~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~ 289 (430)
T 2xyi_A 217 -------EHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYS 289 (430)
T ss_dssp -------GGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSC
T ss_pred -------CCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCC
Confidence 0111233556778999999999999 7889999999999999999987 5778888999999999999998
Q ss_pred C-EEEEEeCCCcEEEEECCC-CeEEEEEecccceeeeeceeeEEEecC
Q 006229 610 S-RLATSSADRTVRVWDTEN-VRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 610 ~-~LaSgS~DgtVrVWDl~t-g~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
. +|++|+.||+|+|||+++ ..++..+..|... |.++.|+|+
T Consensus 290 ~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~-----v~~i~~sp~ 332 (430)
T 2xyi_A 290 EFILATGSADKTVALWDLRNLKLKLHSFESHKDE-----IFQVQWSPH 332 (430)
T ss_dssp TTEEEEEETTSEEEEEETTCTTSCSEEEECCSSC-----EEEEEECSS
T ss_pred CCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCC-----EEEEEECCC
Confidence 7 699999999999999998 5667888777543 557788874
No 94
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.64 E-value=4.1e-15 Score=154.00 Aligned_cols=139 Identities=17% Similarity=0.263 Sum_probs=111.5
Q ss_pred CCceEEEEecCCCCcccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCee
Q 006229 480 SSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVE 559 (655)
Q Consensus 480 ~d~s~l~ws~dg~~~lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~ 559 (655)
.....+.|++++ .+|++|+.|+.|++|+...+ .+..+..+.+|...|.
T Consensus 9 ~~i~~~~~s~~~---------------~~l~~~~~d~~v~i~~~~~~-----------------~~~~~~~~~~h~~~v~ 56 (372)
T 1k8k_C 9 EPISCHAWNKDR---------------TQIAICPNNHEVHIYEKSGN-----------------KWVQVHELKEHNGQVT 56 (372)
T ss_dssp SCCCEEEECTTS---------------SEEEEECSSSEEEEEEEETT-----------------EEEEEEEEECCSSCEE
T ss_pred CCeEEEEECCCC---------------CEEEEEeCCCEEEEEeCCCC-----------------cEEeeeeecCCCCccc
Confidence 355667777654 48899999999999965433 1346778889999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE--ecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeE---EEE
Q 006229 560 SCHFSPDGKLLATGGHDKKAVLWCTESFTVKST--LEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRK---LTF 634 (655)
Q Consensus 560 sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~t--l~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~---v~~ 634 (655)
+++|+|++++|++++.|++|+|||+++++.... +.+|...|++++|+|++.+|++++.|+.|+|||++.+.. ...
T Consensus 57 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~ 136 (372)
T 1k8k_C 57 GVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKH 136 (372)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeee
Confidence 999999999999999999999999998875544 468999999999999999999999999999999988763 233
Q ss_pred E-ecccceeeeeceeeEEEecC
Q 006229 635 I-CCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 635 l-~~~~~~v~s~~Vss~~F~P~ 655 (655)
+ ..|. ..|.+++|+|+
T Consensus 137 ~~~~~~-----~~i~~~~~~~~ 153 (372)
T 1k8k_C 137 IKKPIR-----STVLSLDWHPN 153 (372)
T ss_dssp ECTTCC-----SCEEEEEECTT
T ss_pred eecccC-----CCeeEEEEcCC
Confidence 3 2232 34667788774
No 95
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.64 E-value=1.5e-15 Score=171.41 Aligned_cols=99 Identities=9% Similarity=0.085 Sum_probs=83.7
Q ss_pred CCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCC-----CEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 006229 553 ASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQ-----WITDVRFSPSLSRLATSSADRTVRVWDTE 627 (655)
Q Consensus 553 gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~-----~ItsVafsPdg~~LaSgS~DgtVrVWDl~ 627 (655)
.|...|.+|+|||||.+||+++.|++|+|||..+ ++..+. |.. .|.+|+|+|||++||+|+.||+|+|||+.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 5578899999999999999999999999999654 777788 776 49999999999999999999999999999
Q ss_pred CCe-------EEEEEecccceeeeeceeeEEEecC
Q 006229 628 NVR-------KLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 628 tg~-------~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
++. .+.++..+... +...|.+++|+|+
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~g-h~~~V~sVawSPd 193 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAG-SKDWVTHIVWYED 193 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTT-CCCCEEEEEEETT
T ss_pred CCccccccceeeeeeeccccc-ccccEEEEEEcCC
Confidence 875 36777544322 3346778999996
No 96
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.64 E-value=1.8e-15 Score=159.35 Aligned_cols=162 Identities=11% Similarity=0.243 Sum_probs=124.6
Q ss_pred CCCceEEEEecCCCCc---c-------cccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeE
Q 006229 479 ASSKSLLMFGSDGMGS---L-------TSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEF 548 (655)
Q Consensus 479 S~d~s~l~ws~dg~~~---l-------asss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v 548 (655)
+.++.+.+|+...... + .+....+.+.+.+|++|+.|+.|++|+...... ....+
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~---------------~~~~~ 106 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANN---------------AINSM 106 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTS---------------CCCEE
T ss_pred CCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccc---------------cccch
Confidence 6778888888765321 1 122224466677899999999999996544210 11366
Q ss_pred EeecCCCCCeeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCe------EEE---EecccCCCEEEEEEcCC-CCEEEEEeC
Q 006229 549 QLIPASTSKVESCHFSPD-GKLLATGGHDKKAVLWCTESFT------VKS---TLEEHTQWITDVRFSPS-LSRLATSSA 617 (655)
Q Consensus 549 ~~l~gH~~~V~sl~fSpd-G~lLaSgs~DgtVrIWDl~t~~------~l~---tl~gH~~~ItsVafsPd-g~~LaSgS~ 617 (655)
..+.+|...|.+|+|+|+ +++|++|+.|++|+|||+.+++ ... .+.+|...|++++|+|+ +.+|++++.
T Consensus 107 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 186 (416)
T 2pm9_A 107 ARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGS 186 (416)
T ss_dssp EECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESS
T ss_pred hhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcC
Confidence 778899999999999998 8999999999999999999876 332 34689999999999999 789999999
Q ss_pred CCcEEEEECCCCeEEEEEecccce-eeeeceeeEEEecC
Q 006229 618 DRTVRVWDTENVRKLTFICCYKCI-FVSTAIGSCFFAPT 655 (655)
Q Consensus 618 DgtVrVWDl~tg~~v~~l~~~~~~-v~s~~Vss~~F~P~ 655 (655)
|++|+|||+++++++..+..+... .+...+.+++|+|+
T Consensus 187 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 225 (416)
T 2pm9_A 187 SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPK 225 (416)
T ss_dssp SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSS
T ss_pred CCCEEEEECCCCCcceEEeccccccccCCceEEEEECCC
Confidence 999999999999999888765311 11344678888874
No 97
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.64 E-value=1.8e-15 Score=161.32 Aligned_cols=120 Identities=17% Similarity=0.158 Sum_probs=100.3
Q ss_pred ccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEE-------eecCCCCCeeEEEEcCCC-CEEEE
Q 006229 501 QLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQ-------LIPASTSKVESCHFSPDG-KLLAT 572 (655)
Q Consensus 501 ~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~-------~l~gH~~~V~sl~fSpdG-~lLaS 572 (655)
.+.+.+.++++| .|++|++|+.... ...+. .+.+|...|.+++|+|++ ++|++
T Consensus 184 ~~~~~~~~l~s~-~d~~i~iwd~~~~------------------~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s 244 (447)
T 3dw8_B 184 SINSDYETYLSA-DDLRINLWHLEIT------------------DRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVY 244 (447)
T ss_dssp EECTTSSEEEEE-CSSEEEEEETTEE------------------EEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEE
T ss_pred EEcCCCCEEEEe-CCCeEEEEECCCC------------------CceeeeeecccccccccCcceEEEEECCCCCcEEEE
Confidence 456667888888 7999999965422 01121 366899999999999998 99999
Q ss_pred EeCCCcEEEEeCCCCeE----EEEecccCC------------CEEEEEEcCCCCEEEEEeCCCcEEEEECCC-CeEEEEE
Q 006229 573 GGHDKKAVLWCTESFTV----KSTLEEHTQ------------WITDVRFSPSLSRLATSSADRTVRVWDTEN-VRKLTFI 635 (655)
Q Consensus 573 gs~DgtVrIWDl~t~~~----l~tl~gH~~------------~ItsVafsPdg~~LaSgS~DgtVrVWDl~t-g~~v~~l 635 (655)
|+.|++|+|||+++++. +..+.+|.. .|++|+|+|++++|++++. ++|+|||+++ ++++..+
T Consensus 245 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~ 323 (447)
T 3dw8_B 245 SSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETY 323 (447)
T ss_dssp EETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCE
T ss_pred EeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcccccee
Confidence 99999999999999887 788988887 9999999999999999999 9999999997 8888888
Q ss_pred ecccc
Q 006229 636 CCYKC 640 (655)
Q Consensus 636 ~~~~~ 640 (655)
..|..
T Consensus 324 ~~~~~ 328 (447)
T 3dw8_B 324 QVHEY 328 (447)
T ss_dssp ESCGG
T ss_pred ecccc
Confidence 88754
No 98
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.63 E-value=6.6e-15 Score=148.37 Aligned_cols=171 Identities=11% Similarity=0.054 Sum_probs=134.4
Q ss_pred CceeccCCCCceEEEEecCCCCc--------ccccCcccCCCCcEEEeccCCCcEEEEecCCCCCC--------------
Q 006229 472 PTLQHNGASSKSLLMFGSDGMGS--------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADP-------------- 529 (655)
Q Consensus 472 ~~~~~s~S~d~s~l~ws~dg~~~--------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~-------------- 529 (655)
...+.+++.++.+.+|+...... -.+....+.+.+.++++|+.|+.|++|+..+....
T Consensus 29 ~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~ 108 (313)
T 3odt_A 29 DSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVC 108 (313)
T ss_dssp TTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEE
T ss_pred CCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEE
Confidence 35677888899999999865321 11223355677789999999999999976554311
Q ss_pred -------------CCccccccccCCCceeeeEEeecCCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEecc
Q 006229 530 -------------RDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSP-DGKLLATGGHDKKAVLWCTESFTVKSTLEE 595 (655)
Q Consensus 530 -------------~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSp-dG~lLaSgs~DgtVrIWDl~t~~~l~tl~g 595 (655)
.+..+++|+ ....+..+..|...|.+++|++ ++.+|++++.|+.|++|| ..+.+..+..
T Consensus 109 ~~~~~~~~l~~~~~d~~i~~~d-----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~ 181 (313)
T 3odt_A 109 SLSFQDGVVISGSWDKTAKVWK-----EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSG 181 (313)
T ss_dssp EEEEETTEEEEEETTSEEEEEE-----TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECS
T ss_pred EEEecCCEEEEEeCCCCEEEEc-----CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEec
Confidence 123335554 2245667788999999999998 999999999999999999 5677778877
Q ss_pred -cCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 596 -HTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 596 -H~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
|...|++++|+|++. |++++.|+.|+|||+++++++..+..|... |.+++|+|+
T Consensus 182 ~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-----i~~~~~~~~ 236 (313)
T 3odt_A 182 IHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESF-----VYCIKLLPN 236 (313)
T ss_dssp SCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSC-----EEEEEECTT
T ss_pred cCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCce-----EEEEEEecC
Confidence 999999999999988 999999999999999999999999877654 457778774
No 99
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.63 E-value=1.8e-15 Score=165.50 Aligned_cols=144 Identities=13% Similarity=0.088 Sum_probs=109.2
Q ss_pred CCCCcEEE----eccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCC-CCEEEEEeCCC
Q 006229 503 TDMDRFVD----DGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPD-GKLLATGGHDK 577 (655)
Q Consensus 503 ~~~~~~La----sGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpd-G~lLaSgs~Dg 577 (655)
.+.+.+|+ +|+.|++|++|+........ ......+..+..+.+|...|.+|+|+|+ +.+|++++.|+
T Consensus 101 spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~--------~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 101 SCDNLTLSACMMSSEYGSIIAFFDVRTFSNEA--------KQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp CTTSCEEEEEEEETTTEEEEEEEEHHHHHCTT--------CSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTS
T ss_pred cCCCCEEEEEEeccCCCceEEEEEccccccCC--------cCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCC
Confidence 34445777 89999999999654321000 0000112345667789999999999997 88999999999
Q ss_pred cEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEeccccee--eeeceeeEEEecC
Q 006229 578 KAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIF--VSTAIGSCFFAPT 655 (655)
Q Consensus 578 tVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v--~s~~Vss~~F~P~ 655 (655)
+|+|||++++..+....+|...|++|+|+|+|++|++|+.||+|+|||++ +.....+..+.... +...+.++.|+|+
T Consensus 173 ~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~ 251 (434)
T 2oit_A 173 SIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGT 251 (434)
T ss_dssp CEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEET
T ss_pred eEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecC
Confidence 99999999998887788899999999999999999999999999999999 66666666553211 1224667777763
No 100
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.63 E-value=3.5e-15 Score=181.01 Aligned_cols=151 Identities=25% Similarity=0.325 Sum_probs=129.2
Q ss_pred CCCCceeccCCCCceEEEEecCCCCc--------ccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccC
Q 006229 469 ISRPTLQHNGASSKSLLMFGSDGMGS--------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVG 540 (655)
Q Consensus 469 ~s~~~~~~s~S~d~s~l~ws~dg~~~--------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~ 540 (655)
.++...+++++.++.+.+|+...... -.+....+.+.++++++|+.|++|++|+..++
T Consensus 624 s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~-------------- 689 (1249)
T 3sfz_A 624 SQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG-------------- 689 (1249)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--------------
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC--------------
Confidence 44557788888999999999876322 12233456777889999999999999976544
Q ss_pred CCceeeeEEeecCCCCCeeEEEEcC--CCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCC
Q 006229 541 KGFTFTEFQLIPASTSKVESCHFSP--DGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSAD 618 (655)
Q Consensus 541 ~~~t~~~v~~l~gH~~~V~sl~fSp--dG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~D 618 (655)
+.+..+.+|...|.+++|++ ++.++++|+.|++|++||+++++++.++.+|...|++++|+|++.+|+|++.|
T Consensus 690 -----~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~d 764 (1249)
T 3sfz_A 690 -----KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSAD 764 (1249)
T ss_dssp -----CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESS
T ss_pred -----ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECC
Confidence 46777889999999999999 56699999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEECCCCeEEEEEecc
Q 006229 619 RTVRVWDTENVRKLTFICCY 638 (655)
Q Consensus 619 gtVrVWDl~tg~~v~~l~~~ 638 (655)
|+|++||++++.+...+...
T Consensus 765 g~v~vwd~~~~~~~~~~~~~ 784 (1249)
T 3sfz_A 765 GTLRLWDVRSANERKSINVK 784 (1249)
T ss_dssp SEEEEEEGGGTEEEEEEECC
T ss_pred CeEEEEeCCCCcccceeccc
Confidence 99999999999988877643
No 101
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.63 E-value=2.1e-15 Score=158.23 Aligned_cols=169 Identities=15% Similarity=0.111 Sum_probs=125.9
Q ss_pred ceeccCCCCceEEEEecCCCCc------------------ccccCcccC----CCCcE-EEeccCCCcEEEEecCCCCCC
Q 006229 473 TLQHNGASSKSLLMFGSDGMGS------------------LTSAPNQLT----DMDRF-VDDGSLDDNVESFLSPDDADP 529 (655)
Q Consensus 473 ~~~~s~S~d~s~l~ws~dg~~~------------------lasss~~l~----~~~~~-LasGS~D~tV~vW~s~d~~d~ 529 (655)
..+.+++.++.+.+|+...... -.+....+. +.+.+ +++|+.|+.|++|+.......
T Consensus 82 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 82 CLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE 161 (397)
T ss_dssp EEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred cEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccc
Confidence 5677777888889998765331 112222445 66788 999999999999976551000
Q ss_pred CCccccccccCCCceeeeEEee-------cCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecc---c---
Q 006229 530 RDRVGRSAEVGKGFTFTEFQLI-------PASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEE---H--- 596 (655)
Q Consensus 530 ~d~~~~l~d~~~~~t~~~v~~l-------~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~g---H--- 596 (655)
. ......+.....+ ..|...|.+++|+|++ +|++|+.|+.|+|||+++++++..+.+ |
T Consensus 162 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~ 232 (397)
T 1sq9_A 162 S--------NSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINN 232 (397)
T ss_dssp H--------HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CC
T ss_pred c--------ccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEecccccccc
Confidence 0 0000001111233 4588999999999999 999999999999999999999999999 9
Q ss_pred CCCEEEEEEcCCCCEEEEEeCC---CcEEEEECCCCeEEEEEec-------------ccceeeeeceeeEEEecC
Q 006229 597 TQWITDVRFSPSLSRLATSSAD---RTVRVWDTENVRKLTFICC-------------YKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 597 ~~~ItsVafsPdg~~LaSgS~D---gtVrVWDl~tg~~v~~l~~-------------~~~~v~s~~Vss~~F~P~ 655 (655)
...|++++|+|++.+|++++.| +.|+|||+++++++..+.. |.. .|.+++|+|+
T Consensus 233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~ 302 (397)
T 1sq9_A 233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS-----WVMSLSFNDS 302 (397)
T ss_dssp CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS-----CEEEEEECSS
T ss_pred CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCC-----cEEEEEECCC
Confidence 9999999999999999999999 9999999999999998877 443 4567888874
No 102
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.63 E-value=4.7e-15 Score=160.26 Aligned_cols=161 Identities=20% Similarity=0.286 Sum_probs=124.6
Q ss_pred eeccCCCCceEEEEecCCCCc----------c-----cccCcccCC-CCcEEEeccCCCcEEEEecCCCCCCCCcccccc
Q 006229 474 LQHNGASSKSLLMFGSDGMGS----------L-----TSAPNQLTD-MDRFVDDGSLDDNVESFLSPDDADPRDRVGRSA 537 (655)
Q Consensus 474 ~~~s~S~d~s~l~ws~dg~~~----------l-----asss~~l~~-~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~ 537 (655)
.+.+++.++.+.+|+...... + .+....+.+ ...++++++.|+.|++|+.....
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~---------- 265 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNN---------- 265 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSC----------
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCC----------
Confidence 778888899999999876211 0 011123344 55788999999999999765441
Q ss_pred ccCCCceeeeEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEeCCC-CeEEEEecccCCCEEEEEEcCCCC-EEEE
Q 006229 538 EVGKGFTFTEFQLIPASTSKVESCHFSPDGK-LLATGGHDKKAVLWCTES-FTVKSTLEEHTQWITDVRFSPSLS-RLAT 614 (655)
Q Consensus 538 d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~-lLaSgs~DgtVrIWDl~t-~~~l~tl~gH~~~ItsVafsPdg~-~LaS 614 (655)
....+..+..|...|++|+|+|++. +|++|+.|++|+|||+++ ..++.++.+|...|++|+|+|++. +|++
T Consensus 266 ------~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s 339 (430)
T 2xyi_A 266 ------TSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS 339 (430)
T ss_dssp ------SSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEE
T ss_pred ------CCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEE
Confidence 1134455678999999999999887 799999999999999998 567889999999999999999985 7999
Q ss_pred EeCCCcEEEEECCC--------------CeEEEEEecccceeeeeceeeEEEecC
Q 006229 615 SSADRTVRVWDTEN--------------VRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 615 gS~DgtVrVWDl~t--------------g~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
++.|++|+|||++. ...+..+.+|.. .|.+++|+|+
T Consensus 340 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~p~ 389 (430)
T 2xyi_A 340 SGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA-----KISDFSWNPN 389 (430)
T ss_dssp EETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSS-----CEEEEEECSS
T ss_pred EeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCC-----CceEEEECCC
Confidence 99999999999987 355556555544 3557777774
No 103
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.63 E-value=2.1e-15 Score=161.00 Aligned_cols=135 Identities=10% Similarity=0.024 Sum_probs=95.9
Q ss_pred CCceeccCCCCceEEEEecCCCCcccc-----------cCcccCCCCcEE------------EeccCCCcEEEEecCCCC
Q 006229 471 RPTLQHNGASSKSLLMFGSDGMGSLTS-----------APNQLTDMDRFV------------DDGSLDDNVESFLSPDDA 527 (655)
Q Consensus 471 ~~~~~~s~S~d~s~l~ws~dg~~~las-----------ss~~l~~~~~~L------------asGS~D~tV~vW~s~d~~ 527 (655)
+...+++++.|+++.+|+......+.. ....|.+.+.++ ++|+.|++|++|+...+
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg- 270 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT- 270 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTT-
T ss_pred CCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC-
Confidence 346788889999999999974211110 011244444444 56677777777754433
Q ss_pred CCCCccccccccCCCceeeeEEee-----cCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEE-
Q 006229 528 DPRDRVGRSAEVGKGFTFTEFQLI-----PASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWIT- 601 (655)
Q Consensus 528 d~~d~~~~l~d~~~~~t~~~v~~l-----~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~It- 601 (655)
+.+..+ .+|...+.+.+++ +.++++|+.|++|||||+.+++++.+|.+|.+.|.
T Consensus 271 ------------------k~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs 330 (356)
T 2w18_A 271 ------------------LSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWS 330 (356)
T ss_dssp ------------------EEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCC
T ss_pred ------------------EEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEE
Confidence 222222 4777777666665 88999999999999999999999999999988765
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEC
Q 006229 602 DVRFSPSLSRLATSSADRTVRVWDT 626 (655)
Q Consensus 602 sVafsPdg~~LaSgS~DgtVrVWDl 626 (655)
+|+|+|||++|+|||.|++|||||+
T Consensus 331 ~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 331 FVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEECCCCCEEEEEECCCcEEEecC
Confidence 6999999999999999999999996
No 104
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.62 E-value=1.5e-14 Score=148.56 Aligned_cols=130 Identities=12% Similarity=0.182 Sum_probs=113.0
Q ss_pred cCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEE
Q 006229 502 LTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVL 581 (655)
Q Consensus 502 l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrI 581 (655)
+.+.+.++++++.|+.|++|+.... ...+..+..|...|.+++|+|++++|++++.|+.|+|
T Consensus 183 ~~~~~~~l~~~~~dg~i~i~d~~~~------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 244 (369)
T 3zwl_B 183 WSTKGKYIIAGHKDGKISKYDVSNN------------------YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFL 244 (369)
T ss_dssp ECGGGCEEEEEETTSEEEEEETTTT------------------TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EcCCCCEEEEEcCCCEEEEEECCCC------------------cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEE
Confidence 4455678899999999999965442 2466778889999999999999999999999999999
Q ss_pred EeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCC--------------cEEEEECCCCeEEEEEecccceeeeece
Q 006229 582 WCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADR--------------TVRVWDTENVRKLTFICCYKCIFVSTAI 647 (655)
Q Consensus 582 WDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~Dg--------------tVrVWDl~tg~~v~~l~~~~~~v~s~~V 647 (655)
||+++++++..+. |...|++++|+|++.+|++++.|+ .|++||+.+++++..+..|... |
T Consensus 245 ~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-----v 318 (369)
T 3zwl_B 245 VDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGP-----L 318 (369)
T ss_dssp EETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSC-----E
T ss_pred EECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCc-----E
Confidence 9999999998887 888999999999999999999998 8999999999999999887654 4
Q ss_pred eeEEEecC
Q 006229 648 GSCFFAPT 655 (655)
Q Consensus 648 ss~~F~P~ 655 (655)
.+++|+|+
T Consensus 319 ~~~~~s~~ 326 (369)
T 3zwl_B 319 NTVAISPQ 326 (369)
T ss_dssp EEEEECTT
T ss_pred EEEEECCC
Confidence 56777774
No 105
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.62 E-value=5.7e-15 Score=163.46 Aligned_cols=126 Identities=18% Similarity=0.218 Sum_probs=107.0
Q ss_pred CcEEEeccC-CCcEEEEecCCCCCCCCccccccccCCCceeeeE-EeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEe
Q 006229 506 DRFVDDGSL-DDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEF-QLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWC 583 (655)
Q Consensus 506 ~~~LasGS~-D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v-~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWD 583 (655)
+.++++++. |+.|++|+..++ ... ..+.+|...|++++|+|++++|++|+.|+.|+|||
T Consensus 456 ~~~l~~~~~~d~~i~~~~~~~~-------------------~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~ 516 (615)
T 1pgu_A 456 QNYVAVGLEEGNTIQVFKLSDL-------------------EVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYD 516 (615)
T ss_dssp SSEEEEEETTTSCEEEEETTEE-------------------EEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCEEEEeecCCCeEEEEECCCc-------------------cccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEee
Confidence 456777777 777777744322 111 66778999999999999999999999999999999
Q ss_pred CCCCeEEEEecc-cCCCEEEEEEcC----------CCCEEEEEeCCCcEEEEECCCC-eEEEEEecccceeeeeceeeEE
Q 006229 584 TESFTVKSTLEE-HTQWITDVRFSP----------SLSRLATSSADRTVRVWDTENV-RKLTFICCYKCIFVSTAIGSCF 651 (655)
Q Consensus 584 l~t~~~l~tl~g-H~~~ItsVafsP----------dg~~LaSgS~DgtVrVWDl~tg-~~v~~l~~~~~~v~s~~Vss~~ 651 (655)
+.+++++..+.+ |...|++|+|+| ++++|++++.|++|+|||+.++ +++..+.+|... |.+++
T Consensus 517 ~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~-----v~~l~ 591 (615)
T 1pgu_A 517 LQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDG-----VNNLL 591 (615)
T ss_dssp TTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTC-----EEEEE
T ss_pred CCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccc-----eEEEE
Confidence 999999999998 999999999999 9999999999999999999988 788888777554 55778
Q ss_pred EecC
Q 006229 652 FAPT 655 (655)
Q Consensus 652 F~P~ 655 (655)
|+|+
T Consensus 592 ~s~~ 595 (615)
T 1pgu_A 592 WETP 595 (615)
T ss_dssp EEET
T ss_pred EcCC
Confidence 8875
No 106
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.62 E-value=2.8e-15 Score=153.65 Aligned_cols=172 Identities=11% Similarity=0.066 Sum_probs=130.2
Q ss_pred CCc-eeccCCCCceEEEEec-CCCCcc---------cccCcccCCCCcEEEeccCCCcEEEEecCC---------CCC--
Q 006229 471 RPT-LQHNGASSKSLLMFGS-DGMGSL---------TSAPNQLTDMDRFVDDGSLDDNVESFLSPD---------DAD-- 528 (655)
Q Consensus 471 ~~~-~~~s~S~d~s~l~ws~-dg~~~l---------asss~~l~~~~~~LasGS~D~tV~vW~s~d---------~~d-- 528 (655)
... .+.+++.++.+.+|+. ...... .+....+.+ +.++++++.|+.|++|+... ...
T Consensus 67 ~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 145 (342)
T 1yfq_A 67 NTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSN 145 (342)
T ss_dssp SSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSS
T ss_pred CCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeee
Confidence 345 6777778888999987 542211 111224455 78899999999999997554 220
Q ss_pred ---------------------CCCccccccccCC-CceeeeEEeecCCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEeCC
Q 006229 529 ---------------------PRDRVGRSAEVGK-GFTFTEFQLIPASTSKVESCHFSP-DGKLLATGGHDKKAVLWCTE 585 (655)
Q Consensus 529 ---------------------~~d~~~~l~d~~~-~~t~~~v~~l~gH~~~V~sl~fSp-dG~lLaSgs~DgtVrIWDl~ 585 (655)
..+..+++|+... ... ........|...|.+++|+| ++++|++|+.|+.|+|||++
T Consensus 146 ~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~ 224 (342)
T 1yfq_A 146 NTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDD-NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFD 224 (342)
T ss_dssp SSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTC-CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECC
T ss_pred EEeeCCceEEEEecCCcEEEEeCCCeEEEEECCccccc-cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEc
Confidence 1123446666655 321 12234457888999999999 99999999999999999998
Q ss_pred CC------eEEEEecccCC---------CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecc-cceeee
Q 006229 586 SF------TVKSTLEEHTQ---------WITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCY-KCIFVS 644 (655)
Q Consensus 586 t~------~~l~tl~gH~~---------~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~-~~~v~s 644 (655)
.. +.+..+.+|.. .|++++|+|++++|++++.||+|+|||+++++++..+..| ...+.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~ 299 (342)
T 1yfq_A 225 DQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVK 299 (342)
T ss_dssp TTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEE
T ss_pred CCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceE
Confidence 87 78888888866 9999999999999999999999999999999999999887 665543
No 107
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.62 E-value=5.7e-15 Score=154.24 Aligned_cols=163 Identities=15% Similarity=0.112 Sum_probs=111.4
Q ss_pred ceeccCCCCceEEEEecCCCCcc--------cccCcccCCCCc-EEEeccCCCcEEEEecCCCCCCCCccccccccCCC-
Q 006229 473 TLQHNGASSKSLLMFGSDGMGSL--------TSAPNQLTDMDR-FVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKG- 542 (655)
Q Consensus 473 ~~~~s~S~d~s~l~ws~dg~~~l--------asss~~l~~~~~-~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~- 542 (655)
..+..++.++.+.+|+......+ .+....+.+.+. ++++|+.|+.|++|+....... ...++....
T Consensus 157 ~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~----~~~~~~~~~~ 232 (408)
T 4a11_B 157 CLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGC----LITLDQHNGK 232 (408)
T ss_dssp CEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCC----SEECCTTTTC
T ss_pred cEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcc----cccccccccc
Confidence 36667777888888887642211 112224455555 6899999999999987665311 111111111
Q ss_pred ceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCC-----------------------------------
Q 006229 543 FTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESF----------------------------------- 587 (655)
Q Consensus 543 ~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~----------------------------------- 587 (655)
........+.+|...|.+++|+|++++|++++.|+.|++||++++
T Consensus 233 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (408)
T 4a11_B 233 KSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPY 312 (408)
T ss_dssp SCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEE
T ss_pred cceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEec
Confidence 111122334678999999999999999999999999999998653
Q ss_pred ------------eEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEeccc
Q 006229 588 ------------TVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYK 639 (655)
Q Consensus 588 ------------~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~ 639 (655)
+++..+.+|...|++++|+|++.+|+||+.||+|+|||+++++.+.......
T Consensus 313 ~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~ 376 (408)
T 4a11_B 313 GSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETT 376 (408)
T ss_dssp TTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-----------
T ss_pred CCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceE
Confidence 4567788999999999999999999999999999999999988876554433
No 108
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.61 E-value=6.2e-15 Score=157.75 Aligned_cols=143 Identities=8% Similarity=0.075 Sum_probs=108.3
Q ss_pred cEEEeccCCCcEEEEecCC---CC----------------------------CCCCccccccccC---CCcee-----ee
Q 006229 507 RFVDDGSLDDNVESFLSPD---DA----------------------------DPRDRVGRSAEVG---KGFTF-----TE 547 (655)
Q Consensus 507 ~~LasGS~D~tV~vW~s~d---~~----------------------------d~~d~~~~l~d~~---~~~t~-----~~ 547 (655)
.+|++|+.|++|++|+... +. ...+..+++|++. .+... ..
T Consensus 77 ~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~ 156 (437)
T 3gre_A 77 PYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCEC 156 (437)
T ss_dssp CEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEE
T ss_pred CEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccce
Confidence 4889999999999997544 11 1123444666663 22111 11
Q ss_pred EEeec--C--CCCCeeEEE--EcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecc--cCCCEEEEEEcCCCCEEEEEeCCC
Q 006229 548 FQLIP--A--STSKVESCH--FSPDGKLLATGGHDKKAVLWCTESFTVKSTLEE--HTQWITDVRFSPSLSRLATSSADR 619 (655)
Q Consensus 548 v~~l~--g--H~~~V~sl~--fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~g--H~~~ItsVafsPdg~~LaSgS~Dg 619 (655)
+..+. . +...+.++. +++++.+|++|+.|++|++||+++++++.++.+ |...|++|+|+|++.+|++|+.||
T Consensus 157 i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg 236 (437)
T 3gre_A 157 IRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRG 236 (437)
T ss_dssp EEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTS
T ss_pred eEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCC
Confidence 22221 1 566788887 668999999999999999999999999999998 899999999999999999999999
Q ss_pred cEEEEECCCCeEEEEEe-cccceeeeeceeeEEEec
Q 006229 620 TVRVWDTENVRKLTFIC-CYKCIFVSTAIGSCFFAP 654 (655)
Q Consensus 620 tVrVWDl~tg~~v~~l~-~~~~~v~s~~Vss~~F~P 654 (655)
+|+|||+++++++..+. .+... |.+++|+|
T Consensus 237 ~i~iwd~~~~~~~~~~~~~~~~~-----v~~~~~~~ 267 (437)
T 3gre_A 237 IIDIWDIRFNVLIRSWSFGDHAP-----ITHVEVCQ 267 (437)
T ss_dssp CEEEEETTTTEEEEEEBCTTCEE-----EEEEEECT
T ss_pred eEEEEEcCCccEEEEEecCCCCc-----eEEEEecc
Confidence 99999999999999886 44433 34554444
No 109
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.60 E-value=2.2e-14 Score=158.77 Aligned_cols=167 Identities=17% Similarity=0.196 Sum_probs=129.2
Q ss_pred CCceeccCCCCceEEEEecCCC----Cc--------cc-ccCcccCC--CCcEEEeccCCCcEEEEecCCC--------C
Q 006229 471 RPTLQHNGASSKSLLMFGSDGM----GS--------LT-SAPNQLTD--MDRFVDDGSLDDNVESFLSPDD--------A 527 (655)
Q Consensus 471 ~~~~~~s~S~d~s~l~ws~dg~----~~--------la-sss~~l~~--~~~~LasGS~D~tV~vW~s~d~--------~ 527 (655)
+...+..++ +..+.+|+.+.. .. -. +....+.+ .+++|++|+.|++|++|+...+ .
T Consensus 29 dg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~ 107 (615)
T 1pgu_A 29 TTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVN 107 (615)
T ss_dssp TTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEE
T ss_pred CCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCccccccccc
Confidence 344444444 567888887633 11 11 33445677 7789999999999999977432 0
Q ss_pred -------------------CCC-------C----ccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCC-EEEEEeCC
Q 006229 528 -------------------DPR-------D----RVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGK-LLATGGHD 576 (655)
Q Consensus 528 -------------------d~~-------d----~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~-lLaSgs~D 576 (655)
++. + ..+.+|+. ...+..+.+|...|.+++|+|+++ +|++++.|
T Consensus 108 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~-----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 182 (615)
T 1pgu_A 108 VKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS-----GNSLGEVSGHSQRINACHLKQSRPMRSMTVGDD 182 (615)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT-----CCEEEECCSCSSCEEEEEECSSSSCEEEEEETT
T ss_pred ccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC-----CCcceeeecCCccEEEEEECCCCCcEEEEEeCC
Confidence 000 0 23334441 245677889999999999999998 89999999
Q ss_pred CcEEEEeCCCCeEEEEecccCC---CEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCeEEEEE-e---cccceee
Q 006229 577 KKAVLWCTESFTVKSTLEEHTQ---WITDVRFSPS-LSRLATSSADRTVRVWDTENVRKLTFI-C---CYKCIFV 643 (655)
Q Consensus 577 gtVrIWDl~t~~~l~tl~gH~~---~ItsVafsPd-g~~LaSgS~DgtVrVWDl~tg~~v~~l-~---~~~~~v~ 643 (655)
++|+|||+.+++++.++.+|.. .|++++|+|+ +++|++++.|+.|+|||+++++++..+ . .|...+.
T Consensus 183 ~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~ 257 (615)
T 1pgu_A 183 GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIF 257 (615)
T ss_dssp TEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEE
T ss_pred CcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceE
Confidence 9999999999999999999999 9999999999 999999999999999999999999888 4 5554443
No 110
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.60 E-value=1.6e-14 Score=155.77 Aligned_cols=164 Identities=19% Similarity=0.297 Sum_probs=116.0
Q ss_pred ceeccCCCCceEEEEecCCCCcccc------cCcccCCCCcEEEeccCCCcEEEEecCCCC-------------------
Q 006229 473 TLQHNGASSKSLLMFGSDGMGSLTS------APNQLTDMDRFVDDGSLDDNVESFLSPDDA------------------- 527 (655)
Q Consensus 473 ~~~~s~S~d~s~l~ws~dg~~~las------ss~~l~~~~~~LasGS~D~tV~vW~s~d~~------------------- 527 (655)
..+.+++.++.+.+|+......+.. ....+...+.++++|+.|++|++|+..++.
T Consensus 130 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~ 209 (445)
T 2ovr_B 130 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE 209 (445)
T ss_dssp TEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET
T ss_pred CEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecC
Confidence 4666777777888887654211110 001112224577788888888888765442
Q ss_pred -----CCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEE
Q 006229 528 -----DPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITD 602 (655)
Q Consensus 528 -----d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~Its 602 (655)
...+..+++|+..++ +.+..+.+|...|.+++| ++.+|++|+.|++|++||+++++++.++.+|...|++
T Consensus 210 ~~l~s~s~dg~i~~wd~~~~---~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 284 (445)
T 2ovr_B 210 KRVVSGSRDATLRVWDIETG---QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS 284 (445)
T ss_dssp TEEEEEETTSEEEEEESSSC---CEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEE
T ss_pred CEEEEEeCCCEEEEEECCCC---cEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEE
Confidence 122344466666554 456667788888888888 6788888888888888888888888888888888888
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceee
Q 006229 603 VRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFV 643 (655)
Q Consensus 603 VafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~ 643 (655)
++| ++.+|++|+.|++|++||+++++++..+..|...+.
T Consensus 285 ~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~ 323 (445)
T 2ovr_B 285 LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 323 (445)
T ss_dssp EEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEE
T ss_pred EEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEE
Confidence 888 678888888888888888888888888877765443
No 111
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.60 E-value=8.4e-15 Score=168.86 Aligned_cols=161 Identities=17% Similarity=0.226 Sum_probs=129.5
Q ss_pred CCceeccCCCCceEEEEecCCCCc--------ccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCC
Q 006229 471 RPTLQHNGASSKSLLMFGSDGMGS--------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKG 542 (655)
Q Consensus 471 ~~~~~~s~S~d~s~l~ws~dg~~~--------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~ 542 (655)
+...+.+++.++.+.+|+...... ..+....+.+.+.+|++|+.|++|++|+..++
T Consensus 24 ~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~---------------- 87 (814)
T 3mkq_A 24 TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG---------------- 87 (814)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC----------------
T ss_pred CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC----------------
Confidence 345677777788899998754211 11223345666788999999999999976544
Q ss_pred ceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCC-eEEEEecccCCCEEEEEEcC-CCCEEEEEeCCCc
Q 006229 543 FTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESF-TVKSTLEEHTQWITDVRFSP-SLSRLATSSADRT 620 (655)
Q Consensus 543 ~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~-~~l~tl~gH~~~ItsVafsP-dg~~LaSgS~Dgt 620 (655)
+.+..+.+|.+.|++++|+|++++|++|+.|++|+|||++++ .+...+.+|...|++++|+| ++.+|++++.|++
T Consensus 88 ---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~ 164 (814)
T 3mkq_A 88 ---EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT 164 (814)
T ss_dssp ---CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE
T ss_pred ---cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCe
Confidence 466777899999999999999999999999999999999987 78888999999999999999 8899999999999
Q ss_pred EEEEECCCCeEEEEEecccceeeeeceeeEEEec
Q 006229 621 VRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAP 654 (655)
Q Consensus 621 VrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P 654 (655)
|++||++++.....+..+.. ..+..++|+|
T Consensus 165 v~vwd~~~~~~~~~~~~~~~----~~v~~~~~~~ 194 (814)
T 3mkq_A 165 VKVWSLGQSTPNFTLTTGQE----RGVNYVDYYP 194 (814)
T ss_dssp EEEEETTCSSCSEEEECCCT----TCCCEEEECC
T ss_pred EEEEECCCCcceeEEecCCC----CCEEEEEEEE
Confidence 99999998888777765531 2244566665
No 112
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.60 E-value=1.7e-14 Score=146.00 Aligned_cols=174 Identities=14% Similarity=0.206 Sum_probs=124.9
Q ss_pred eeccCCCCceEEEEecCCCCc----------ccccCcccCCCCcEEEeccCCCcEEEEecCCCCCC--------------
Q 006229 474 LQHNGASSKSLLMFGSDGMGS----------LTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADP-------------- 529 (655)
Q Consensus 474 ~~~s~S~d~s~l~ws~dg~~~----------lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~-------------- 529 (655)
+++. +.|+++.+|+.+.... ..+....+.+.++++++|+.|++|++|+..++...
T Consensus 38 ~lAv-g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~ 116 (318)
T 4ggc_A 38 VLAV-ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLS 116 (318)
T ss_dssp EEEE-EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EEEE-EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEee
Confidence 3443 3488999999865211 11334466777899999999999999987765410
Q ss_pred ----------CCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE----EEE---
Q 006229 530 ----------RDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTV----KST--- 592 (655)
Q Consensus 530 ----------~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~----l~t--- 592 (655)
.+.....|+... ....+..+.+|...+.++.|++++++|++++.|++|+|||+++++. +..
T Consensus 117 ~~~~~l~s~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 194 (318)
T 4ggc_A 117 WNSYILSSGSRSGHIHHHDVRV--AEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQ 194 (318)
T ss_dssp EETTEEEEEETTSEEEEEETTS--SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECC
T ss_pred cCCCEEEEEecCCceEeeecCC--CceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecc
Confidence 111112222222 1245667789999999999999999999999999999999875421 000
Q ss_pred -----------------------------------------ecccCCCEEEEEEcCCCCEEEEEe--CCCcEEEEECCCC
Q 006229 593 -----------------------------------------LEEHTQWITDVRFSPSLSRLATSS--ADRTVRVWDTENV 629 (655)
Q Consensus 593 -----------------------------------------l~gH~~~ItsVafsPdg~~LaSgS--~DgtVrVWDl~tg 629 (655)
...|...|.+++|+|++..+++++ .|++|+|||++++
T Consensus 195 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~ 274 (318)
T 4ggc_A 195 HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM 274 (318)
T ss_dssp CCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC
T ss_pred cCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCC
Confidence 012445677888899888887765 7999999999999
Q ss_pred eEEEEEecccceeeeeceeeEEEecC
Q 006229 630 RKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 630 ~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+++.++.+|... |.+++|+|+
T Consensus 275 ~~~~~l~gH~~~-----V~~l~~spd 295 (318)
T 4ggc_A 275 AKVAELKGHTSR-----VLSLTMSPD 295 (318)
T ss_dssp CEEEEECCCSSC-----EEEEEECTT
T ss_pred cEEEEEcCCCCC-----EEEEEEcCC
Confidence 999999988664 557888885
No 113
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.59 E-value=1.1e-14 Score=157.01 Aligned_cols=165 Identities=16% Similarity=0.225 Sum_probs=129.4
Q ss_pred CceeccCCCCceEEEEecCCCCccc------ccCcccCCCCcEEEeccCCCcEEEEecCCCCC-----------------
Q 006229 472 PTLQHNGASSKSLLMFGSDGMGSLT------SAPNQLTDMDRFVDDGSLDDNVESFLSPDDAD----------------- 528 (655)
Q Consensus 472 ~~~~~s~S~d~s~l~ws~dg~~~la------sss~~l~~~~~~LasGS~D~tV~vW~s~d~~d----------------- 528 (655)
...+.+++.++.+.+|+......+. .....+...+.++++|+.|++|++|+...+..
T Consensus 183 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~ 262 (435)
T 1p22_A 183 ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV 262 (435)
T ss_dssp SSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEE
Confidence 4577888889999999886532111 01112223356889999999999997765431
Q ss_pred ----------CCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCC
Q 006229 529 ----------PRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQ 598 (655)
Q Consensus 529 ----------~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~ 598 (655)
..+..+++|+..++ ..+..+.+|...|.++.|+ +.+|++|+.|++|+|||+++++++.++.+|..
T Consensus 263 ~~~~~~l~s~~~dg~i~vwd~~~~---~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~ 337 (435)
T 1p22_A 263 DFDDKYIVSASGDRTIKVWNTSTC---EFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 337 (435)
T ss_dssp EEETTEEEEEETTSEEEEEETTTC---CEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred EeCCCEEEEEeCCCeEEEEECCcC---cEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcC
Confidence 12344567776655 5677788999999999994 78999999999999999999999999999999
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCe---------EEEEEecccceee
Q 006229 599 WITDVRFSPSLSRLATSSADRTVRVWDTENVR---------KLTFICCYKCIFV 643 (655)
Q Consensus 599 ~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~---------~v~~l~~~~~~v~ 643 (655)
.|++++| ++.+|++|+.||+|+|||++++. ++..+..|...+.
T Consensus 338 ~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~ 389 (435)
T 1p22_A 338 LVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVF 389 (435)
T ss_dssp CEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCC
T ss_pred cEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeE
Confidence 9999999 78999999999999999998766 8888888776544
No 114
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.59 E-value=3.3e-14 Score=152.70 Aligned_cols=181 Identities=17% Similarity=0.225 Sum_probs=134.2
Q ss_pred CCCCceeccCCCCceEEEEecCCCCccc------ccCcccCCCCcEEEeccCCCcEEEEecCCCC---------------
Q 006229 469 ISRPTLQHNGASSKSLLMFGSDGMGSLT------SAPNQLTDMDRFVDDGSLDDNVESFLSPDDA--------------- 527 (655)
Q Consensus 469 ~s~~~~~~s~S~d~s~l~ws~dg~~~la------sss~~l~~~~~~LasGS~D~tV~vW~s~d~~--------------- 527 (655)
.++...+++++.++.+.+|+......+. .....+...+.++++|+.|+.+++|+.....
T Consensus 156 spdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~ 235 (420)
T 4gga_A 156 IKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCG 235 (420)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEE
T ss_pred CCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceee
Confidence 3445677788888888899876532111 1111233445789999999999999765432
Q ss_pred ------------CCCCccccccccCCCce-eeeEEeecCCCCCeeEEEEcCCC-CEEEEE--eCCCcEEEEeCCCCeEEE
Q 006229 528 ------------DPRDRVGRSAEVGKGFT-FTEFQLIPASTSKVESCHFSPDG-KLLATG--GHDKKAVLWCTESFTVKS 591 (655)
Q Consensus 528 ------------d~~d~~~~l~d~~~~~t-~~~v~~l~gH~~~V~sl~fSpdG-~lLaSg--s~DgtVrIWDl~t~~~l~ 591 (655)
...+..+++|+...+.. ...+.....|...|.+++|+|++ .+|+++ +.|++|+|||+.+++++.
T Consensus 236 ~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~ 315 (420)
T 4gga_A 236 LRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS 315 (420)
T ss_dssp EEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEE
T ss_pred eeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccce
Confidence 11234456666655432 23456677899999999999955 466654 579999999999999999
Q ss_pred EecccCCCEEEEEEcCCCCEEEEEe--CCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 592 TLEEHTQWITDVRFSPSLSRLATSS--ADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 592 tl~gH~~~ItsVafsPdg~~LaSgS--~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
.+..| ..|.++.|+|++..|++++ .|++|+|||+.+++++.++.+|... |.+++|+|+
T Consensus 316 ~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~-----V~~l~~spd 375 (420)
T 4gga_A 316 AVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR-----VLSLTMSPD 375 (420)
T ss_dssp EEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC-----EEEEEECTT
T ss_pred eeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCC-----EEEEEEcCC
Confidence 88755 5688999999999988876 7999999999999999999988764 557788885
No 115
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.59 E-value=3.4e-14 Score=149.97 Aligned_cols=173 Identities=16% Similarity=0.068 Sum_probs=112.2
Q ss_pred CCCCceeccCCCCceEEEEecCCCCcc------cccCcccCCCCcEE-EeccCCCcEEEEecCCCCCC------------
Q 006229 469 ISRPTLQHNGASSKSLLMFGSDGMGSL------TSAPNQLTDMDRFV-DDGSLDDNVESFLSPDDADP------------ 529 (655)
Q Consensus 469 ~s~~~~~~s~S~d~s~l~ws~dg~~~l------asss~~l~~~~~~L-asGS~D~tV~vW~s~d~~d~------------ 529 (655)
.++...+.+++.+ ...+|+.+..... .+....+.....++ .+|+.|++|++|+...+...
T Consensus 28 s~dg~~la~g~~~-~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v 106 (355)
T 3vu4_A 28 NQDQSCLILSTLK-SFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDL 106 (355)
T ss_dssp CTTSSEEEEECSS-EEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEECSSCEEEE
T ss_pred CCCCCEEEEEcCC-EEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEECCCceEEE
Confidence 3444566666555 4568886642111 11112223333444 67888899999987655310
Q ss_pred ----------CCccccccccCCC-ceeeeEEeecCCCCCeeEEEEcCCCCEEEE--EeCCCcEEEEeCCCCe--------
Q 006229 530 ----------RDRVGRSAEVGKG-FTFTEFQLIPASTSKVESCHFSPDGKLLAT--GGHDKKAVLWCTESFT-------- 588 (655)
Q Consensus 530 ----------~d~~~~l~d~~~~-~t~~~v~~l~gH~~~V~sl~fSpdG~lLaS--gs~DgtVrIWDl~t~~-------- 588 (655)
.+..+++|+..+. .... .+.. ....++|++ .+++. |+.|++|+|||+.++.
T Consensus 107 ~~~~~~~~~~~~~~i~i~d~~~~~~~~~---~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~ 178 (355)
T 3vu4_A 107 FLSREFIVVSYGDVISVFKFGNPWKRIT---DDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQG 178 (355)
T ss_dssp EECSSEEEEEETTEEEEEESSTTCCBSS---CCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC----------
T ss_pred EEcCCEEEEEEcCEEEEEECCCCceeeE---Eecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCcccccccc
Confidence 0112233433332 1111 1111 334455665 55555 5889999999999865
Q ss_pred --------EEEEecccCCCEEEEEEcCCCCEEEEEeCCCc-EEEEECCCCeEEEEEe-c-ccceeeeeceeeEEEecC
Q 006229 589 --------VKSTLEEHTQWITDVRFSPSLSRLATSSADRT-VRVWDTENVRKLTFIC-C-YKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 589 --------~l~tl~gH~~~ItsVafsPdg~~LaSgS~Dgt-VrVWDl~tg~~v~~l~-~-~~~~v~s~~Vss~~F~P~ 655 (655)
++.++.+|...|++|+|+|++++|+|||.|++ |+|||+++++++..+. + |.. .|.+++|+|+
T Consensus 179 ~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~-----~v~~~~~s~~ 251 (355)
T 3vu4_A 179 VQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRA-----DVVDMKWSTD 251 (355)
T ss_dssp --------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCS-----CEEEEEECTT
T ss_pred ccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCC-----cEEEEEECCC
Confidence 27789999999999999999999999999998 9999999999999998 3 543 4668888885
No 116
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.58 E-value=1.8e-14 Score=167.78 Aligned_cols=163 Identities=15% Similarity=0.218 Sum_probs=127.7
Q ss_pred CCceeccCCCCceEEEEecCCCC----------cccccCcccCCC--CcEEEeccCCCcEEEEecCCCCCCCCccccccc
Q 006229 471 RPTLQHNGASSKSLLMFGSDGMG----------SLTSAPNQLTDM--DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAE 538 (655)
Q Consensus 471 ~~~~~~s~S~d~s~l~ws~dg~~----------~lasss~~l~~~--~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d 538 (655)
+...+.+++.++.+.+|+..+.. .-.+....+.+. +.++++|+.|++|++|+...+
T Consensus 20 dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~------------ 87 (753)
T 3jro_A 20 YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG------------ 87 (753)
T ss_dssp SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETT------------
T ss_pred CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCC------------
Confidence 34567788889999999886311 111222234443 689999999999999965433
Q ss_pred cCCCceeeeEEeecCCCCCeeEEEEcCC--CCEEEEEeCCCcEEEEeCCCC--eEEEEecccCCCEEEEEEcC-------
Q 006229 539 VGKGFTFTEFQLIPASTSKVESCHFSPD--GKLLATGGHDKKAVLWCTESF--TVKSTLEEHTQWITDVRFSP------- 607 (655)
Q Consensus 539 ~~~~~t~~~v~~l~gH~~~V~sl~fSpd--G~lLaSgs~DgtVrIWDl~t~--~~l~tl~gH~~~ItsVafsP------- 607 (655)
....+..+.+|...|++++|+|+ +.+|++|+.|++|+|||++++ .....+.+|...|++++|+|
T Consensus 88 -----~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 88 -----RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp -----EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-----
T ss_pred -----cccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccc
Confidence 13466778899999999999999 999999999999999999877 34556789999999999999
Q ss_pred ------CCCEEEEEeCCCcEEEEECCCC----eEEEEEecccceeeeeceeeEEEecC
Q 006229 608 ------SLSRLATSSADRTVRVWDTENV----RKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 608 ------dg~~LaSgS~DgtVrVWDl~tg----~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
++.+|++|+.||+|+|||++++ .++..+.+|... |.+++|+|+
T Consensus 163 ~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~-----V~~l~~sp~ 215 (753)
T 3jro_A 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW-----VRDVAWSPT 215 (753)
T ss_dssp ----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC-----EEEEEECCC
T ss_pred ccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCc-----EEEEEeccC
Confidence 5899999999999999999877 555666666543 557778774
No 117
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.58 E-value=1.8e-14 Score=147.90 Aligned_cols=165 Identities=9% Similarity=0.116 Sum_probs=118.8
Q ss_pred CceeccCCCCceEEEEecCCCC-ccc--------ccCc------ccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccc
Q 006229 472 PTLQHNGASSKSLLMFGSDGMG-SLT--------SAPN------QLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRS 536 (655)
Q Consensus 472 ~~~~~s~S~d~s~l~ws~dg~~-~la--------sss~------~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l 536 (655)
...+.+++.++.+.+|+..... .+. +... .+.+.+.+|++|+.|++|++|+...+.
T Consensus 80 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~--------- 150 (357)
T 3i2n_A 80 QRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD--------- 150 (357)
T ss_dssp TCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS---------
T ss_pred CceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC---------
Confidence 3567777888899999887533 110 0111 235566789999999999999665441
Q ss_pred cccCCCceeeeEEeecCCC----CCeeEEE----EcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcC-
Q 006229 537 AEVGKGFTFTEFQLIPAST----SKVESCH----FSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSP- 607 (655)
Q Consensus 537 ~d~~~~~t~~~v~~l~gH~----~~V~sl~----fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsP- 607 (655)
..+..+..|. ..|.+++ |++++++|++|+.|+.|++||+++++++. ...|...|++++|+|
T Consensus 151 ---------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~ 220 (357)
T 3i2n_A 151 ---------DPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRW-ETNIKNGVCSLEFDRK 220 (357)
T ss_dssp ---------SCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEESCS
T ss_pred ---------CcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceee-ecCCCCceEEEEcCCC
Confidence 1223333333 3788888 78899999999999999999999998754 467999999999999
Q ss_pred --CCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 608 --SLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 608 --dg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
++.+|++++.|+.|+|||+++++++..+.......+...|.+++|+|+
T Consensus 221 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 270 (357)
T 3i2n_A 221 DISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQ 270 (357)
T ss_dssp SSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETT
T ss_pred CCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCC
Confidence 999999999999999999998766555541111122344667888874
No 118
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.57 E-value=6.5e-14 Score=151.80 Aligned_cols=157 Identities=13% Similarity=0.046 Sum_probs=117.5
Q ss_pred ceeccCCCCceEEEEecCCCCcc------------cccCcccCCC---CcEEEeccCCCcEEEEecCCCCCCCCcccccc
Q 006229 473 TLQHNGASSKSLLMFGSDGMGSL------------TSAPNQLTDM---DRFVDDGSLDDNVESFLSPDDADPRDRVGRSA 537 (655)
Q Consensus 473 ~~~~s~S~d~s~l~ws~dg~~~l------------asss~~l~~~---~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~ 537 (655)
..+.+++.+..+..|+....... .+....+.+. +.+|++|+.|++|++|+...+
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~----------- 230 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC----------- 230 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT-----------
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC-----------
Confidence 45555566666777765432111 1112234444 679999999999999976544
Q ss_pred ccCCCceeeeEEe-ecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEeccc--------------------
Q 006229 538 EVGKGFTFTEFQL-IPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEH-------------------- 596 (655)
Q Consensus 538 d~~~~~t~~~v~~-l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH-------------------- 596 (655)
..+.. +.+|...|.+++|+ ++++|++|+.|++|+|||+++++++.++..|
T Consensus 231 --------~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (450)
T 2vdu_B 231 --------FIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNE 301 (450)
T ss_dssp --------TCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-------
T ss_pred --------ceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccccccccccc
Confidence 22333 56899999999999 9999999999999999999999998888633
Q ss_pred -----CCCEEEEEEcCCCCEEEEEe-CCCcEEEEEC--CCC---eEEEEEecccceeeeeceeeEEEecC
Q 006229 597 -----TQWITDVRFSPSLSRLATSS-ADRTVRVWDT--ENV---RKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 597 -----~~~ItsVafsPdg~~LaSgS-~DgtVrVWDl--~tg---~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
...|.+|+|+|++++|++++ .|+.|+|||+ .++ .++..+..+. .+.+++|+|+
T Consensus 302 ~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~------~v~~~~~~~~ 365 (450)
T 2vdu_B 302 NNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPY------NVISLSAHND 365 (450)
T ss_dssp ---CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSS------CEEEEEEETT
T ss_pred ccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCC------ceEEEEecCC
Confidence 45799999999999999999 8999999999 555 6666776652 2456777763
No 119
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.57 E-value=2.7e-14 Score=166.31 Aligned_cols=126 Identities=19% Similarity=0.250 Sum_probs=106.1
Q ss_pred cEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCC--CCEEEEEeCCCcEEEEeC
Q 006229 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPD--GKLLATGGHDKKAVLWCT 584 (655)
Q Consensus 507 ~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpd--G~lLaSgs~DgtVrIWDl 584 (655)
.++++|+.|++|++|+...+ +...+..+.+|.+.|++++|+++ +.+|++|+.|++|+|||+
T Consensus 22 ~~latg~~dg~I~vwd~~~~-----------------~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~ 84 (753)
T 3jro_A 22 KRLATCSSDKTIKIFEVEGE-----------------THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 84 (753)
T ss_dssp CCEEEEETTTEEEEEEEETT-----------------EEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEE
T ss_pred CeEEEEECCCcEEEEecCCC-----------------CCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEEC
Confidence 47899999999999965422 23567788999999999999997 999999999999999999
Q ss_pred CCCe--EEEEecccCCCEEEEEEcCC--CCEEEEEeCCCcEEEEECCCCeE--EEEEecccceeeeeceeeEEEec
Q 006229 585 ESFT--VKSTLEEHTQWITDVRFSPS--LSRLATSSADRTVRVWDTENVRK--LTFICCYKCIFVSTAIGSCFFAP 654 (655)
Q Consensus 585 ~t~~--~l~tl~gH~~~ItsVafsPd--g~~LaSgS~DgtVrVWDl~tg~~--v~~l~~~~~~v~s~~Vss~~F~P 654 (655)
.+++ .+..+.+|...|++|+|+|+ +.+|++|+.||+|+|||++++.. ...+..|.. .|.++.|+|
T Consensus 85 ~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~-----~v~~l~~~p 155 (753)
T 3jro_A 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI-----GVNSASWAP 155 (753)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSS-----CEEEEEECC
T ss_pred CCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCC-----ceEEEEecC
Confidence 9987 77888999999999999999 99999999999999999998733 344444443 355677776
No 120
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.57 E-value=5.2e-14 Score=151.64 Aligned_cols=127 Identities=19% Similarity=0.238 Sum_probs=101.1
Q ss_pred CcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 006229 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTE 585 (655)
Q Consensus 506 ~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~ 585 (655)
+.++++|+.|++|++|+..++ +.+..+.+|...|.++.++ +++|++|+.|++|++||++
T Consensus 289 ~~~l~~~~~d~~i~i~d~~~~-------------------~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~ 347 (445)
T 2ovr_B 289 GIHVVSGSLDTSIRVWDVETG-------------------NCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIK 347 (445)
T ss_dssp SSEEEEEETTSCEEEEETTTC-------------------CEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETT
T ss_pred CCEEEEEeCCCeEEEEECCCC-------------------CEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECC
Confidence 345666666666666644332 4667788999999998885 7799999999999999999
Q ss_pred CCeEEEEecc---cCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 586 SFTVKSTLEE---HTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 586 t~~~l~tl~g---H~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+++++.++.+ |...|++++|+ +.+|++|+.||+|+|||+++++.+..+...........|.+++|+|+
T Consensus 348 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 418 (445)
T 2ovr_B 348 TGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT 418 (445)
T ss_dssp TCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSS
T ss_pred CCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCC
Confidence 9999999986 88999999996 68999999999999999999999988843322223445677888875
No 121
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.57 E-value=6.3e-15 Score=157.75 Aligned_cols=180 Identities=8% Similarity=0.032 Sum_probs=109.4
Q ss_pred CCceeccCCCCceEEEEecCCCCcc--------cccCcccCCCC-cEEEeccCCCcEEEEecCCCCCCCCccc-----cc
Q 006229 471 RPTLQHNGASSKSLLMFGSDGMGSL--------TSAPNQLTDMD-RFVDDGSLDDNVESFLSPDDADPRDRVG-----RS 536 (655)
Q Consensus 471 ~~~~~~s~S~d~s~l~ws~dg~~~l--------asss~~l~~~~-~~LasGS~D~tV~vW~s~d~~d~~d~~~-----~l 536 (655)
+..++++++.|+++.+|+....... .+....+.+.+ .+|++|+.|++|++|+...+........ ..
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~ 234 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNP 234 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCC
T ss_pred CCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccc
Confidence 3468889999999999997543211 11223455554 5799999999999998876642211110 00
Q ss_pred ccc-CCCceeeeEEeecCCCCCeeEEEEc-CCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcC-------
Q 006229 537 AEV-GKGFTFTEFQLIPASTSKVESCHFS-PDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSP------- 607 (655)
Q Consensus 537 ~d~-~~~~t~~~v~~l~gH~~~V~sl~fS-pdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsP------- 607 (655)
+.. .............+|...|.++.|+ +||+.|++++.|++|+|||+.+++....+.+|...+..+.+.|
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 314 (393)
T 4gq1_A 235 WLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISL 314 (393)
T ss_dssp CSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECS
T ss_pred eEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccc
Confidence 000 0001111223345789999999997 6999999999999999999999888888877777666655444
Q ss_pred -------------CCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 608 -------------SLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 608 -------------dg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
++.++++|+.|++|+|||+.++.++..+..|.. .|.+++|+||
T Consensus 315 ~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~-----~V~svafspd 370 (393)
T 4gq1_A 315 FPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGM-----PIVDFCWHQD 370 (393)
T ss_dssp SCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSS-----CEEEEEECTT
T ss_pred cCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCC-----cEEEEEEcCC
Confidence 334678889999999999999998887776654 4668999996
No 122
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.56 E-value=5.4e-14 Score=158.77 Aligned_cols=156 Identities=11% Similarity=0.017 Sum_probs=117.8
Q ss_pred CCCCceeccCCCCceEEEEecCC------CCcc----cccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccc
Q 006229 469 ISRPTLQHNGASSKSLLMFGSDG------MGSL----TSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAE 538 (655)
Q Consensus 469 ~s~~~~~~s~S~d~s~l~ws~dg------~~~l----asss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d 538 (655)
++++..+++++.++.+++|+.++ +... .+....+.+.+++|++|+.|++|++|+..++..
T Consensus 94 SPdG~~LAs~s~dg~V~iwd~~~~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l---------- 163 (588)
T 2j04_A 94 SPIDDWMAVLSNNGNVSVFKDNKMLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSE---------- 163 (588)
T ss_dssp CSSSSCEEEEETTSCEEEEETTEEEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTT----------
T ss_pred CCCCCEEEEEeCCCcEEEEeCCceeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcc----------
Confidence 45667888888999999998322 2111 233456788899999999999999997655410
Q ss_pred cCCCceeeeEEee----cCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE---EEEe-cccCCCEEEEEEcCCCC
Q 006229 539 VGKGFTFTEFQLI----PASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTV---KSTL-EEHTQWITDVRFSPSLS 610 (655)
Q Consensus 539 ~~~~~t~~~v~~l----~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~---l~tl-~gH~~~ItsVafsPdg~ 610 (655)
....+-.+.++ .+|.+.|.+|+|+||| |++++.|++|++||+.+... ..++ .+|...|.+|+|+ +.
T Consensus 164 --~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~ 237 (588)
T 2j04_A 164 --NTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DY 237 (588)
T ss_dssp --TCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TT
T ss_pred --ccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CC
Confidence 00112234554 6788899999999999 88899999999999988773 4567 4899999999999 68
Q ss_pred EEEEEeCCCcEEEEECCCCeEEEEEecccce
Q 006229 611 RLATSSADRTVRVWDTENVRKLTFICCYKCI 641 (655)
Q Consensus 611 ~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~ 641 (655)
+||+++ |++|+|||+.++.......+|...
T Consensus 238 ~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~ 267 (588)
T 2j04_A 238 KVVLTC-PGYVHKIDLKNYSISSLKTGSLEN 267 (588)
T ss_dssp EEEEEC-SSEEEEEETTTTEEEEEECSCCSC
T ss_pred EEEEEe-CCeEEEEECCCCeEEEEEcCCCce
Confidence 999998 799999999988774444355443
No 123
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.55 E-value=1.4e-14 Score=148.51 Aligned_cols=137 Identities=12% Similarity=-0.011 Sum_probs=108.5
Q ss_pred CCceEEEEecCCCCcccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCee
Q 006229 480 SSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVE 559 (655)
Q Consensus 480 ~d~s~l~ws~dg~~~lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~ 559 (655)
.....+.|++++. +|++++.|+.|++|+...+. .......+.+|...|.
T Consensus 12 ~~v~~~~~s~~~~---------------~l~~~~~d~~v~iw~~~~~~----------------~~~~~~~~~~~~~~v~ 60 (342)
T 1yfq_A 12 DYISDIKIIPSKS---------------LLLITSWDGSLTVYKFDIQA----------------KNVDLLQSLRYKHPLL 60 (342)
T ss_dssp SCEEEEEEEGGGT---------------EEEEEETTSEEEEEEEETTT----------------TEEEEEEEEECSSCEE
T ss_pred CcEEEEEEcCCCC---------------EEEEEcCCCeEEEEEeCCCC----------------ccccceeeeecCCceE
Confidence 3456777777544 78899999999999654431 1123445568999999
Q ss_pred EEEEcCCCC-EEEEEeCCCcEEEEeC-CCCeEEEEecc--cCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC-------
Q 006229 560 SCHFSPDGK-LLATGGHDKKAVLWCT-ESFTVKSTLEE--HTQWITDVRFSPSLSRLATSSADRTVRVWDTEN------- 628 (655)
Q Consensus 560 sl~fSpdG~-lLaSgs~DgtVrIWDl-~t~~~l~tl~g--H~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~t------- 628 (655)
+++|+|+++ +|++|+.|+.|++||+ .+++. ..+.+ |...|++++|+| +.+|++++.|++|++||+++
T Consensus 61 ~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~ 138 (342)
T 1yfq_A 61 CCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIA 138 (342)
T ss_dssp EEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEE
T ss_pred EEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccccccccccc
Confidence 999999999 9999999999999999 87765 67888 999999999999 99999999999999999987
Q ss_pred --CeEEEEEecccceeeeeceeeEEEecC
Q 006229 629 --VRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 629 --g~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
++++..+. + ...+.+++|+|+
T Consensus 139 ~~~~~~~~~~-~-----~~~v~~~~~~~~ 161 (342)
T 1yfq_A 139 VKNLNSNNTK-V-----KNKIFTMDTNSS 161 (342)
T ss_dssp EEESCSSSSS-S-----CCCEEEEEECSS
T ss_pred ccCCeeeEEe-e-----CCceEEEEecCC
Confidence 55554443 2 234556777764
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.44 E-value=4e-12 Score=133.33 Aligned_cols=155 Identities=16% Similarity=0.153 Sum_probs=114.7
Q ss_pred eeccCCCCceEEEEecCCCCcc-------cccCcccCCCCcEE-EeccCCCcEEEEecCCCCCCCCccccccccCCCcee
Q 006229 474 LQHNGASSKSLLMFGSDGMGSL-------TSAPNQLTDMDRFV-DDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTF 545 (655)
Q Consensus 474 ~~~s~S~d~s~l~ws~dg~~~l-------asss~~l~~~~~~L-asGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~ 545 (655)
+..+++.++.+.+|+.+....+ ......+.+.++++ ++++.|++|++|+..++
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~------------------- 64 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN------------------- 64 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT-------------------
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCC-------------------
Confidence 4456667788888887652111 11222445555554 67778999999965443
Q ss_pred eeEEeecCCCCCeeEEEEcCCCCEEEE-EeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEE-EEEeCCCcEEE
Q 006229 546 TEFQLIPASTSKVESCHFSPDGKLLAT-GGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRL-ATSSADRTVRV 623 (655)
Q Consensus 546 ~~v~~l~gH~~~V~sl~fSpdG~lLaS-gs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~L-aSgS~DgtVrV 623 (655)
+.+..+..+. .|.+++|+|++++|+. ++.|++|++||+.+++.+..+..| ..+.+++|+|++++| ++++.|+.|++
T Consensus 65 ~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~ 142 (391)
T 1l0q_A 65 NVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSV 142 (391)
T ss_dssp EEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEE
Confidence 3444555554 8999999999997754 556799999999999998888754 478999999999987 78888999999
Q ss_pred EECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 624 WDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 624 WDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
||+++++++..+..+.. +.+++|+|+
T Consensus 143 ~d~~~~~~~~~~~~~~~------~~~~~~~~d 168 (391)
T 1l0q_A 143 INTVTKAVINTVSVGRS------PKGIAVTPD 168 (391)
T ss_dssp EETTTTEEEEEEECCSS------EEEEEECTT
T ss_pred EECCCCcEEEEEecCCC------cceEEECCC
Confidence 99999999988876543 345667764
No 125
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.43 E-value=3.5e-13 Score=147.43 Aligned_cols=98 Identities=16% Similarity=0.225 Sum_probs=82.8
Q ss_pred CCCCCeeEEEEcCCCCEEE----EEeCCCcEEEEeCCCC--------e---EEEEecccCCCEEEEEEcCC-CCEEEEEe
Q 006229 553 ASTSKVESCHFSPDGKLLA----TGGHDKKAVLWCTESF--------T---VKSTLEEHTQWITDVRFSPS-LSRLATSS 616 (655)
Q Consensus 553 gH~~~V~sl~fSpdG~lLa----Sgs~DgtVrIWDl~t~--------~---~l~tl~gH~~~ItsVafsPd-g~~LaSgS 616 (655)
.|...|.+|+|+|+|++|+ +|+.|++|+|||++++ + .+..+.+|...|++|+|+|+ +.+|++++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 4567899999999999999 8889999999998654 1 35677889999999999998 88999999
Q ss_pred CCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 617 ADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 617 ~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
.||+|+|||++++.++.....|.. .|.+++|+|+
T Consensus 170 ~Dg~v~iwD~~~~~~~~~~~~~~~-----~v~~v~wspd 203 (434)
T 2oit_A 170 ADGSIAVLQVTETVKVCATLPSTV-----AVTSVCWSPK 203 (434)
T ss_dssp TTSCEEEEEESSSEEEEEEECGGG-----CEEEEEECTT
T ss_pred CCCeEEEEEcCCCcceeeccCCCC-----ceeEEEEcCC
Confidence 999999999999977766655543 4567888885
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.42 E-value=2.3e-12 Score=137.08 Aligned_cols=135 Identities=9% Similarity=0.085 Sum_probs=106.8
Q ss_pred ccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEE
Q 006229 501 QLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAV 580 (655)
Q Consensus 501 ~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVr 580 (655)
.+.+.+.++++++.|++|++|+..++.. . .......+.+|...|.+++|+++++++++++.|++|+
T Consensus 129 ~~s~~~~~~~~~~~~~~i~~~d~~~g~~--------~------~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~ 194 (433)
T 3bws_A 129 RFIDNTRLAIPLLEDEGMDVLDINSGQT--------V------RLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVH 194 (433)
T ss_dssp EESSSSEEEEEBTTSSSEEEEETTTCCE--------E------EECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEE
T ss_pred EEeCCCeEEEEeCCCCeEEEEECCCCeE--------e------eecCcccccccCCceeEEEEcCCCEEEEEECCCCEEE
Confidence 3444556788888899999997655410 0 0001114568999999999999999999999999999
Q ss_pred EEeCCCCeEEEEecccCCCEEEEEEcCCCCEEE-EEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 581 LWCTESFTVKSTLEEHTQWITDVRFSPSLSRLA-TSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 581 IWDl~t~~~l~tl~gH~~~ItsVafsPdg~~La-SgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+||+++++++.++..|...|.+++|+|++++|+ +++.|++|++||+++++++..+..+.. +.+++|+|+
T Consensus 195 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~------~~~~~~~~~ 264 (433)
T 3bws_A 195 VFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGL------PRGLLLSKD 264 (433)
T ss_dssp EEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSE------EEEEEECTT
T ss_pred EEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCC------ceEEEEcCC
Confidence 999999999999999999999999999999885 455899999999999998877765432 456666664
No 127
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.41 E-value=4.6e-12 Score=132.92 Aligned_cols=122 Identities=20% Similarity=0.146 Sum_probs=99.3
Q ss_pred cEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEE-EEEeCCCcEEEEeCC
Q 006229 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLL-ATGGHDKKAVLWCTE 585 (655)
Q Consensus 507 ~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lL-aSgs~DgtVrIWDl~ 585 (655)
.++++++.|++|++|+...+ +.+..+..|. .|.+++|+|+|++| ++++.|++|++||+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~-------------------~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~ 62 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSN-------------------KVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTA 62 (391)
T ss_dssp EEEEEETTTTEEEEEETTTT-------------------EEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETT
T ss_pred EEEEEcCCCCEEEEEECCCC-------------------eEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECC
Confidence 46788999999999966544 4555666664 58999999999976 677799999999999
Q ss_pred CCeEEEEecccCCCEEEEEEcCCCCEEE-EEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 586 SFTVKSTLEEHTQWITDVRFSPSLSRLA-TSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 586 t~~~l~tl~gH~~~ItsVafsPdg~~La-SgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+++++..+..|. .|++++|+|++++|+ +++.|++|++||+.+++.+..+..+.. +.+++|+|+
T Consensus 63 ~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~------~~~~~~s~d 126 (391)
T 1l0q_A 63 TNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKS------PLGLALSPD 126 (391)
T ss_dssp TTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSS------EEEEEECTT
T ss_pred CCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCC------cceEEECCC
Confidence 999999888665 999999999999875 455679999999999999888876543 356777764
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.41 E-value=9.7e-12 Score=132.27 Aligned_cols=158 Identities=6% Similarity=-0.040 Sum_probs=119.6
Q ss_pred CceeccCCCCceEEEEecCCCCccc-------------ccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccc
Q 006229 472 PTLQHNGASSKSLLMFGSDGMGSLT-------------SAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAE 538 (655)
Q Consensus 472 ~~~~~s~S~d~s~l~ws~dg~~~la-------------sss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d 538 (655)
..+..+++.+..+.+|+........ +....+.+.+.++++++.|+.|++|+...+
T Consensus 134 ~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~------------ 201 (433)
T 3bws_A 134 TRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL------------ 201 (433)
T ss_dssp SEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC------------
T ss_pred CeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc------------
Confidence 3566667778889999987532221 111234556678899999999999965433
Q ss_pred cCCCceeeeEEeecCCCCCeeEEEEcCCCCEEE-EEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEe-
Q 006229 539 VGKGFTFTEFQLIPASTSKVESCHFSPDGKLLA-TGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSS- 616 (655)
Q Consensus 539 ~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLa-Sgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS- 616 (655)
+.+..+..|...|.+++|+|++++|+ +++.|++|++||+++++.+..+..+ ..+.+++|+|++++|++++
T Consensus 202 -------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 202 -------AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp -------CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEE
T ss_pred -------eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEEC
Confidence 35566678889999999999999775 5558999999999999999888765 4599999999999999998
Q ss_pred -------CCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 617 -------ADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 617 -------~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
.|+.|++||+++++.+..+... ..+.+++|+|+
T Consensus 274 ~~~~~~~~dg~i~~~d~~~~~~~~~~~~~------~~~~~~~~~~~ 313 (433)
T 3bws_A 274 SASNQESGGGRLGIYSMDKEKLIDTIGPP------GNKRHIVSGNT 313 (433)
T ss_dssp ESCTTCSCCEEEEEEETTTTEEEEEEEEE------ECEEEEEECSS
T ss_pred CCCccccCCCeEEEEECCCCcEEeeccCC------CCcceEEECCC
Confidence 5899999999999877665322 23446677764
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.25 E-value=1.5e-10 Score=125.07 Aligned_cols=147 Identities=12% Similarity=0.035 Sum_probs=104.1
Q ss_pred ceEEEEecCCCCcc-------cccCcccCCCCcEEEeccCCC---cEEEEecCCCCCCCCccccccccCCCceeeeEEee
Q 006229 482 KSLLMFGSDGMGSL-------TSAPNQLTDMDRFVDDGSLDD---NVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLI 551 (655)
Q Consensus 482 ~s~l~ws~dg~~~l-------asss~~l~~~~~~LasGS~D~---tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l 551 (655)
+.+.+|+.++.... .+....+.+.++.|++++.|+ .|++|+..++ + ...+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg-------------------~-~~~l 218 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANG-------------------A-VRQV 218 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC-------------------C-EEEE
T ss_pred ceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCC-------------------c-EEEe
Confidence 67788887763211 111224566667788887775 7788855433 1 2245
Q ss_pred cCCCCCeeEEEEcCCCCEEE-EEeCCCc--EEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeC-CC--cEEEEE
Q 006229 552 PASTSKVESCHFSPDGKLLA-TGGHDKK--AVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSA-DR--TVRVWD 625 (655)
Q Consensus 552 ~gH~~~V~sl~fSpdG~lLa-Sgs~Dgt--VrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~-Dg--tVrVWD 625 (655)
..|...|.+++|+|||++|+ +++.|+. |++||+.++++ ..+.+|...+++++|+|||++|++++. |+ .|++||
T Consensus 219 ~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 219 ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 56778899999999999777 6766655 99999998876 577889999999999999999998886 45 678889
Q ss_pred CCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 626 TENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 626 l~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+.+++.. .+..+.. .+.+++|+|+
T Consensus 298 ~~~~~~~-~l~~~~~-----~~~~~~~spd 321 (415)
T 2hqs_A 298 INGGAPQ-RITWEGS-----QNQDADVSSD 321 (415)
T ss_dssp TTSSCCE-ECCCSSS-----EEEEEEECTT
T ss_pred CCCCCEE-EEecCCC-----cccCeEECCC
Confidence 9887643 3333322 2446777775
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.23 E-value=9.3e-11 Score=126.80 Aligned_cols=101 Identities=20% Similarity=0.150 Sum_probs=82.6
Q ss_pred EEeecCCCCCeeEEEEcCCCCEEEEEeCCC---cEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEE-EEeCCCc--E
Q 006229 548 FQLIPASTSKVESCHFSPDGKLLATGGHDK---KAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLA-TSSADRT--V 621 (655)
Q Consensus 548 v~~l~gH~~~V~sl~fSpdG~lLaSgs~Dg---tVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~La-SgS~Dgt--V 621 (655)
++.+.+|...|.+++|||||++|++++.|+ .|++||++++++. .+..|...|.+++|+|||++|+ +++.|+. |
T Consensus 171 ~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i 249 (415)
T 2hqs_A 171 QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNL 249 (415)
T ss_dssp CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceE
Confidence 355667888999999999999999999885 9999999998876 5777999999999999999887 7777665 9
Q ss_pred EEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 622 RVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 622 rVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
++||++++++ ..+..+.. .+.+++|+|+
T Consensus 250 ~~~d~~~~~~-~~l~~~~~-----~~~~~~~spd 277 (415)
T 2hqs_A 250 YVMDLASGQI-RQVTDGRS-----NNTEPTWFPD 277 (415)
T ss_dssp EEEETTTCCE-EECCCCSS-----CEEEEEECTT
T ss_pred EEEECCCCCE-EeCcCCCC-----cccceEECCC
Confidence 9999998876 34444432 3557788885
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.15 E-value=4.9e-10 Score=126.11 Aligned_cols=111 Identities=12% Similarity=0.039 Sum_probs=94.1
Q ss_pred cEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeC--
Q 006229 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCT-- 584 (655)
Q Consensus 507 ~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl-- 584 (655)
.++++++.|++|.+|+...+ +++.++..+.. +.+++|+|||++|++++.|++|++||+
T Consensus 150 ~~~vs~~~d~~V~v~D~~t~-------------------~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~ 209 (543)
T 1nir_A 150 LFSVTLRDAGQIALVDGDSK-------------------KIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWA 209 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTC-------------------CEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTS
T ss_pred EEEEEEcCCCeEEEEECCCc-------------------eEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcC
Confidence 57788889999999965443 45556653323 889999999999999999999999999
Q ss_pred CCCeEEEEecccCCCEEEEEEcC----CCCEEEEEeC-CCcEEEEECCCCeEEEEEecc
Q 006229 585 ESFTVKSTLEEHTQWITDVRFSP----SLSRLATSSA-DRTVRVWDTENVRKLTFICCY 638 (655)
Q Consensus 585 ~t~~~l~tl~gH~~~ItsVafsP----dg~~LaSgS~-DgtVrVWDl~tg~~v~~l~~~ 638 (655)
.+++++.++. +...+.+|+|+| +|++|++++. |++|+|||..+++++.++..+
T Consensus 210 ~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~ 267 (543)
T 1nir_A 210 KEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTR 267 (543)
T ss_dssp SSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECC
T ss_pred CCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeeccc
Confidence 8999999888 555789999999 9999999985 899999999999999988754
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.15 E-value=2.5e-10 Score=112.71 Aligned_cols=131 Identities=14% Similarity=0.101 Sum_probs=94.4
Q ss_pred cCCCCcEEE-eccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEe-CCCcE
Q 006229 502 LTDMDRFVD-DGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGG-HDKKA 579 (655)
Q Consensus 502 l~~~~~~La-sGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs-~DgtV 579 (655)
+.+.+++|+ +++.|+.+++|..... . .....+..|...|.+++|+|+|++|+.++ .|+.+
T Consensus 136 ~spdg~~l~~~~~~~~~~~l~~~~~~--------------~----~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 197 (297)
T 2ojh_A 136 WSPDGKSFTYCGIRDQVFDIYSMDID--------------S----GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQM 197 (297)
T ss_dssp ECTTSSEEEEEEEETTEEEEEEEETT--------------T----CCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred ECCCCCEEEEEECCCCceEEEEEECC--------------C----CcceEcccCCCccccceECCCCCEEEEEecCCCCc
Confidence 344444444 6777888888853211 1 12344556778899999999999887766 59999
Q ss_pred EEEeCC-CCeEEEEecccCCCEEEEEEcCCCCEEEEEeCC-----------CcEEEEECCCCeEEE--EEecccceeeee
Q 006229 580 VLWCTE-SFTVKSTLEEHTQWITDVRFSPSLSRLATSSAD-----------RTVRVWDTENVRKLT--FICCYKCIFVST 645 (655)
Q Consensus 580 rIWDl~-t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~D-----------gtVrVWDl~tg~~v~--~l~~~~~~v~s~ 645 (655)
+||+++ .+..+..+..|...+.+++|+|++++|++++.| +.|++||+.+++... .+..+..
T Consensus 198 ~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~----- 272 (297)
T 2ojh_A 198 QIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQG----- 272 (297)
T ss_dssp EEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTT-----
T ss_pred cEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCc-----
Confidence 999986 566777888899999999999999999998876 569999999876533 3323332
Q ss_pred ceeeEEEecC
Q 006229 646 AIGSCFFAPT 655 (655)
Q Consensus 646 ~Vss~~F~P~ 655 (655)
.+.+++|+|+
T Consensus 273 ~~~~~~~spd 282 (297)
T 2ojh_A 273 TMNSPNWSPD 282 (297)
T ss_dssp TSCSCCBCTT
T ss_pred ccccceECCC
Confidence 3445667664
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.13 E-value=4e-10 Score=129.05 Aligned_cols=97 Identities=16% Similarity=0.168 Sum_probs=76.2
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCe--EEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q 006229 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFT--VKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTF 634 (655)
Q Consensus 557 ~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~--~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~ 634 (655)
.|.+++|||||++|++++. +.|++||+.++. .+..+..|...|.+++|+|||++|++++. +.|++||+.+++....
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQL 187 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEEC
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEe
Confidence 4889999999999999987 999999999883 44567789899999999999999999984 5999999999877654
Q ss_pred Eecccceeeee-----------ceeeEEEecC
Q 006229 635 ICCYKCIFVST-----------AIGSCFFAPT 655 (655)
Q Consensus 635 l~~~~~~v~s~-----------~Vss~~F~P~ 655 (655)
...+...+... .+.++.|+||
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpD 219 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPD 219 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTT
T ss_pred ccCCccceeccccceeeeeccccccceEECCC
Confidence 44333211111 1467889886
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.11 E-value=9.3e-10 Score=111.99 Aligned_cols=138 Identities=12% Similarity=0.097 Sum_probs=94.1
Q ss_pred cCCCCceEEEEecCCCCc--c--------cccCcccCCCCcEEEeccCC-CcEEEEecCCCCCCCCccccccccCCCcee
Q 006229 477 NGASSKSLLMFGSDGMGS--L--------TSAPNQLTDMDRFVDDGSLD-DNVESFLSPDDADPRDRVGRSAEVGKGFTF 545 (655)
Q Consensus 477 s~S~d~s~l~ws~dg~~~--l--------asss~~l~~~~~~LasGS~D-~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~ 545 (655)
+.+.++.+.+|+.+..+. . ......+.+.+++|++++.+ +.|.+|..... . ...
T Consensus 10 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~--------------~-~~~ 74 (343)
T 1ri6_A 10 ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPD--------------D-GAL 74 (343)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTT--------------T-CCE
T ss_pred eCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCC--------------C-Cce
Confidence 335577888887753221 1 11122455666777766665 89999855311 0 112
Q ss_pred eeEEeecCCCCCeeEEEEcCCCCEEEEEeC-CCcEEEEeC---CCCeEEEEecccCCCEEEEEEcCCCCEEEEEe-CCCc
Q 006229 546 TEFQLIPASTSKVESCHFSPDGKLLATGGH-DKKAVLWCT---ESFTVKSTLEEHTQWITDVRFSPSLSRLATSS-ADRT 620 (655)
Q Consensus 546 ~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~-DgtVrIWDl---~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS-~Dgt 620 (655)
..+..+..+. .+.+++|+|+|++|++++. |+.|++||+ .+.+.+..+..+ ..+.+++|+|++++|++++ .|+.
T Consensus 75 ~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~ 152 (343)
T 1ri6_A 75 TFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDR 152 (343)
T ss_dssp EEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTE
T ss_pred eeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCE
Confidence 3444444444 7899999999998877665 889999999 444556666544 4589999999999988888 8999
Q ss_pred EEEEECCC-CeE
Q 006229 621 VRVWDTEN-VRK 631 (655)
Q Consensus 621 VrVWDl~t-g~~ 631 (655)
|++||+.+ ++.
T Consensus 153 v~~~d~~~~~~~ 164 (343)
T 1ri6_A 153 ICLFTVSDDGHL 164 (343)
T ss_dssp EEEEEECTTSCE
T ss_pred EEEEEecCCCce
Confidence 99999987 644
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.10 E-value=1.6e-09 Score=110.79 Aligned_cols=123 Identities=11% Similarity=-0.023 Sum_probs=94.9
Q ss_pred cEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeC-CCcEEEEeCC
Q 006229 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGH-DKKAVLWCTE 585 (655)
Q Consensus 507 ~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~-DgtVrIWDl~ 585 (655)
..+++++.+++|.+|+..++ +.+..+..+...+ +++|+|||++|++++. ++.|++||+.
T Consensus 11 ~~~v~~~~~~~v~~~d~~~~-------------------~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~ 70 (331)
T 3u4y_A 11 FGIVVEQHLRRISFFSTDTL-------------------EILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQ 70 (331)
T ss_dssp EEEEEEGGGTEEEEEETTTC-------------------CEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECS
T ss_pred EEEEEecCCCeEEEEeCccc-------------------ceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECC
Confidence 55778888999999966544 2334444455566 9999999996666665 8999999999
Q ss_pred CCeE-EEEecccCCCEEEEEEcCCCCEEEEEeCCC---cEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 586 SFTV-KSTLEEHTQWITDVRFSPSLSRLATSSADR---TVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 586 t~~~-l~tl~gH~~~ItsVafsPdg~~LaSgS~Dg---tVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+++. ...+..+...+.+++|+|++++|+++..++ .|++||+.+++.+..+..+.. ..+++|+|+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~------~~~~~~spd 138 (331)
T 3u4y_A 71 LEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYD------AVGIAISPN 138 (331)
T ss_dssp SSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTT------EEEEEECTT
T ss_pred CCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCC------ccceEECCC
Confidence 9987 777877777777799999999999555553 899999999998887765443 246777775
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.09 E-value=3.4e-10 Score=129.08 Aligned_cols=103 Identities=13% Similarity=0.040 Sum_probs=78.9
Q ss_pred cCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCE------------------EEEEEcCCCCEEE
Q 006229 552 PASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWI------------------TDVRFSPSLSRLA 613 (655)
Q Consensus 552 ~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~I------------------tsVafsPdg~~La 613 (655)
.+|...|.+++|||||++|+.++. +.|++||+.++++......+...| .+++|+|||++|+
T Consensus 110 ~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la 188 (723)
T 1xfd_A 110 EVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLA 188 (723)
T ss_dssp TCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEE
T ss_pred ccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEE
Confidence 456666899999999999999886 799999999988877666554433 7899999999999
Q ss_pred EEeCCC----------------------------------cEEEEECCCCeEEEEEeccccee-eeeceeeEEEecC
Q 006229 614 TSSADR----------------------------------TVRVWDTENVRKLTFICCYKCIF-VSTAIGSCFFAPT 655 (655)
Q Consensus 614 SgS~Dg----------------------------------tVrVWDl~tg~~v~~l~~~~~~v-~s~~Vss~~F~P~ 655 (655)
+++.|+ +|++||+.++++...+..+.... ....+.+++|+||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpD 265 (723)
T 1xfd_A 189 YAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATS 265 (723)
T ss_dssp EEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSS
T ss_pred EEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCC
Confidence 998654 79999999888766665542111 1233567888886
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.08 E-value=5.9e-09 Score=106.90 Aligned_cols=103 Identities=17% Similarity=0.160 Sum_probs=82.7
Q ss_pred eeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecc----cCCCEEEEEEcCCCCEEEEEeC-CCc
Q 006229 546 TEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEE----HTQWITDVRFSPSLSRLATSSA-DRT 620 (655)
Q Consensus 546 ~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~g----H~~~ItsVafsPdg~~LaSgS~-Dgt 620 (655)
+.+..+..+...+.+++|+|||++|++++.|+.|.+||+.+++.+..+.. +...+.+++|+|++++|+.++. ++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 254 (353)
T 3vgz_A 175 KLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAE 254 (353)
T ss_dssp EEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSE
T ss_pred ceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCE
Confidence 34455554556688999999999999999999999999999998887763 6677899999999998777665 589
Q ss_pred EEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 621 VRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 621 VrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
|.+||+.+++.+..+..+.. ..++|+|+
T Consensus 255 v~~~d~~~~~~~~~~~~~~~-------~~~~~s~d 282 (353)
T 3vgz_A 255 VLVVDTRNGNILAKVAAPES-------LAVLFNPA 282 (353)
T ss_dssp EEEEETTTCCEEEEEECSSC-------CCEEEETT
T ss_pred EEEEECCCCcEEEEEEcCCC-------ceEEECCC
Confidence 99999999998887765432 24566654
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.07 E-value=4.6e-09 Score=107.68 Aligned_cols=155 Identities=8% Similarity=0.008 Sum_probs=105.6
Q ss_pred CceEEEEecCCCCccc-------ccCcccCCCCc-EEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeec
Q 006229 481 SKSLLMFGSDGMGSLT-------SAPNQLTDMDR-FVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIP 552 (655)
Q Consensus 481 d~s~l~ws~dg~~~la-------sss~~l~~~~~-~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~ 552 (655)
+..+.+|++....... .....+.+.++ +++++..++.|.+|+..++ +.+..+.
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~-------------------~~~~~~~ 128 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTG-------------------EVKGRLV 128 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTC-------------------CEEEEEE
T ss_pred CccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCC-------------------eeEEEEe
Confidence 4566777665422111 11113334444 4455566788888865544 2222333
Q ss_pred CCCC---------CeeEEEEcCCCCEEEEEe--CCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcE
Q 006229 553 ASTS---------KVESCHFSPDGKLLATGG--HDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTV 621 (655)
Q Consensus 553 gH~~---------~V~sl~fSpdG~lLaSgs--~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtV 621 (655)
.+.. .+.+++|+|+|++|++++ .++.|.+||+.+++.+..+..+...+.+++|+|++++|++++.|+.|
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i 208 (353)
T 3vgz_A 129 LDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGEL 208 (353)
T ss_dssp SCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEE
T ss_pred cCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeE
Confidence 2221 268899999999777776 47899999999999999988777779999999999999999999999
Q ss_pred EEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 622 RVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 622 rVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
.+||+.+++.+..+...... ....+.+++|+|+
T Consensus 209 ~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~s~d 241 (353)
T 3vgz_A 209 ITIDTADNKILSRKKLLDDG-KEHFFINISLDTA 241 (353)
T ss_dssp EEEETTTTEEEEEEECCCSS-SCCCEEEEEEETT
T ss_pred EEEECCCCeEEEEEEcCCCC-CCcccceEEECCC
Confidence 99999999988777652211 1122445677764
No 139
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.03 E-value=2e-09 Score=129.61 Aligned_cols=100 Identities=13% Similarity=0.043 Sum_probs=84.3
Q ss_pred eecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCC----------
Q 006229 550 LIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADR---------- 619 (655)
Q Consensus 550 ~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~Dg---------- 619 (655)
.+.+|...|.+++|||||++|++++.|+.|++||+.++++...+.+|...|.+++|+|||++|++++.++
T Consensus 373 ~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~ 452 (1045)
T 1k32_A 373 KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQ 452 (1045)
T ss_dssp ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEE
T ss_pred EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCC
Confidence 3447888899999999999999999999999999999999888889999999999999999999888754
Q ss_pred cEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 620 TVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 620 tVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
.|+|||+.+++ +..+..+... +.+++|+|+
T Consensus 453 ~i~l~d~~~g~-~~~l~~~~~~-----~~~~~~spd 482 (1045)
T 1k32_A 453 AIHVYDMEGRK-IFAATTENSH-----DYAPAFDAD 482 (1045)
T ss_dssp EEEEEETTTTE-EEECSCSSSB-----EEEEEECTT
T ss_pred eEEEEECCCCc-EEEeeCCCcc-----cCCceEcCC
Confidence 89999999887 5555555332 335677775
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.01 E-value=8.2e-09 Score=101.78 Aligned_cols=151 Identities=14% Similarity=0.128 Sum_probs=99.3
Q ss_pred CceEEEEecCC-CCcc---------cccCcccCCCCcEEEecc--CCCcEEEEecCCCCCCCCccccccccCCCceeeeE
Q 006229 481 SKSLLMFGSDG-MGSL---------TSAPNQLTDMDRFVDDGS--LDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEF 548 (655)
Q Consensus 481 d~s~l~ws~dg-~~~l---------asss~~l~~~~~~LasGS--~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v 548 (655)
+..+.+|+.++ .... .+....+.+.+++|++++ .++.+++|..... .. ..
T Consensus 61 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~--------------~~----~~ 122 (297)
T 2ojh_A 61 EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPST--------------GG----TP 122 (297)
T ss_dssp TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETT--------------CC----CC
T ss_pred CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECC--------------CC----ce
Confidence 55777887765 2211 111234455666777776 3456666643211 11 12
Q ss_pred EeecCCCCCeeEEEEcCCCCEEE-EEeCCCcEEEEeCC-CCeEEEEecccCCCEEEEEEcCCCCEEEEEe-CCCcEEEEE
Q 006229 549 QLIPASTSKVESCHFSPDGKLLA-TGGHDKKAVLWCTE-SFTVKSTLEEHTQWITDVRFSPSLSRLATSS-ADRTVRVWD 625 (655)
Q Consensus 549 ~~l~gH~~~V~sl~fSpdG~lLa-Sgs~DgtVrIWDl~-t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS-~DgtVrVWD 625 (655)
..+..+ ..+.+++|+|||++|+ +++.|+.++||+++ .......+..|...|.+++|+|++++|+.++ .|+.++||+
T Consensus 123 ~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~ 201 (297)
T 2ojh_A 123 RLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWR 201 (297)
T ss_dssp EECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred EEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEE
Confidence 223333 3488999999999777 78899999999863 2234456778899999999999999888776 599999999
Q ss_pred CC-CCeEEEEEecccceeeeeceeeEEEecC
Q 006229 626 TE-NVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 626 l~-tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
++ .+..+..+..+.. .+.++.|+|+
T Consensus 202 ~~~~~~~~~~~~~~~~-----~~~~~~~s~d 227 (297)
T 2ojh_A 202 VRVDGSSVERITDSAY-----GDWFPHPSPS 227 (297)
T ss_dssp EETTSSCEEECCCCSE-----EEEEEEECTT
T ss_pred ECCCCCCcEEEecCCc-----ccCCeEECCC
Confidence 86 5556666655442 3456777775
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.99 E-value=4e-09 Score=120.27 Aligned_cols=154 Identities=10% Similarity=-0.034 Sum_probs=101.4
Q ss_pred ceEEEEecCCCCc--cc--------ccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEee
Q 006229 482 KSLLMFGSDGMGS--LT--------SAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLI 551 (655)
Q Consensus 482 ~s~l~ws~dg~~~--la--------sss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l 551 (655)
..+.+|+.++... +. +....+.+.++.|+.++. ++|.+|+...+. .....
T Consensus 91 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~-------------------~~~~~ 150 (723)
T 1xfd_A 91 GYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQ-------------------AIRVV 150 (723)
T ss_dssp SEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSC-------------------CEEEE
T ss_pred eeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCc-------------------eEEEe
Confidence 5677787765321 11 222356667777777765 678888554431 11111
Q ss_pred cCCC------------------CCeeEEEEcCCCCEEEEEeCCC----------------------------------cE
Q 006229 552 PAST------------------SKVESCHFSPDGKLLATGGHDK----------------------------------KA 579 (655)
Q Consensus 552 ~gH~------------------~~V~sl~fSpdG~lLaSgs~Dg----------------------------------tV 579 (655)
..+. +.+.+++|||||++|++++.|+ +|
T Consensus 151 ~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l 230 (723)
T 1xfd_A 151 STGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISL 230 (723)
T ss_dssp CCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEE
T ss_pred cCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEE
Confidence 1111 2347899999999999988653 79
Q ss_pred EEEeCCCCeEEEEeccc------CCCEEEEEEcCCCCEEEEEeC----CCcEEEEECCCCeEEEEEecccceeeeeceee
Q 006229 580 VLWCTESFTVKSTLEEH------TQWITDVRFSPSLSRLATSSA----DRTVRVWDTENVRKLTFICCYKCIFVSTAIGS 649 (655)
Q Consensus 580 rIWDl~t~~~l~tl~gH------~~~ItsVafsPdg~~LaSgS~----DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss 649 (655)
++||+.++++...+..| ...|.+++|+|||++|++.+. +..|++||+.++++...+..+...........
T Consensus 231 ~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 310 (723)
T 1xfd_A 231 HVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEE 310 (723)
T ss_dssp EEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCC
T ss_pred EEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCC
Confidence 99999998876667654 678999999999999877753 35799999999988776644322111100135
Q ss_pred EEEecC
Q 006229 650 CFFAPT 655 (655)
Q Consensus 650 ~~F~P~ 655 (655)
++|+||
T Consensus 311 ~~~spd 316 (723)
T 1xfd_A 311 PVFSKD 316 (723)
T ss_dssp CEECTT
T ss_pred ceEcCC
Confidence 677775
No 142
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.99 E-value=5e-09 Score=106.29 Aligned_cols=124 Identities=14% Similarity=0.096 Sum_probs=92.6
Q ss_pred cEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeec-CCCC-CeeEEEEcCCCCEE-EEEeCCCcEEEEe
Q 006229 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIP-ASTS-KVESCHFSPDGKLL-ATGGHDKKAVLWC 583 (655)
Q Consensus 507 ~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~-gH~~-~V~sl~fSpdG~lL-aSgs~DgtVrIWD 583 (655)
.++++++.|++|.+|+..++ +.+..+. ++.. .+.+++|+|||++| ++++.++.|++||
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~-------------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 62 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKM-------------------AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKID 62 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT-------------------EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEE
T ss_pred cEEEEcCCCCeEEEEECCCC-------------------cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEE
Confidence 57888999999999965443 2333333 2222 47899999999865 5566689999999
Q ss_pred CCCCeEEEEecc-c----CCCEEEEEEcCCCCEEEEEe------------CCCcEEEEECCCCeEEEEEecccceeeeec
Q 006229 584 TESFTVKSTLEE-H----TQWITDVRFSPSLSRLATSS------------ADRTVRVWDTENVRKLTFICCYKCIFVSTA 646 (655)
Q Consensus 584 l~t~~~l~tl~g-H----~~~ItsVafsPdg~~LaSgS------------~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~ 646 (655)
+.+++.+..+.. + ...+.+++|+|+|++|++++ .|+.|++||+.+++.+..+.....
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~------ 136 (337)
T 1pby_B 63 LVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ------ 136 (337)
T ss_dssp TTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS------
T ss_pred CCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCC------
Confidence 999998877752 2 23678999999999999887 679999999999988877764322
Q ss_pred eeeEEEecC
Q 006229 647 IGSCFFAPT 655 (655)
Q Consensus 647 Vss~~F~P~ 655 (655)
+.+++|+|+
T Consensus 137 ~~~~~~s~d 145 (337)
T 1pby_B 137 ITMLAWARD 145 (337)
T ss_dssp CCCEEECTT
T ss_pred cceeEECCC
Confidence 345667764
No 143
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.99 E-value=4.1e-09 Score=120.14 Aligned_cols=168 Identities=14% Similarity=0.088 Sum_probs=105.8
Q ss_pred CceEEEEecCCCCcc-------cccCcccCCCCcEEEeccCCCcEEEEecCC-----CCCCCCccccccccCCCceeeeE
Q 006229 481 SKSLLMFGSDGMGSL-------TSAPNQLTDMDRFVDDGSLDDNVESFLSPD-----DADPRDRVGRSAEVGKGFTFTEF 548 (655)
Q Consensus 481 d~s~l~ws~dg~~~l-------asss~~l~~~~~~LasGS~D~tV~vW~s~d-----~~d~~d~~~~l~d~~~~~t~~~v 548 (655)
+..+.+|+..+.... .+....+.+.+++|+.+ .|++|.+|+..+ +... .+...........+
T Consensus 100 ~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~-----~~~~~~~~~~~~g~ 173 (706)
T 2z3z_A 100 QGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAI-----AVTIDGTETLVYGQ 173 (706)
T ss_dssp TTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCE-----ESCSCCBTTEEESS
T ss_pred CCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcE-----EeccCCCCCeEccc
Confidence 477888887653211 12233567777788774 689999997655 3210 00000000000000
Q ss_pred EeecCCCCCeeEEEEcCCCCEEEEEe---------------------------------CCCcEEEEeCCCCeEEEEec-
Q 006229 549 QLIPASTSKVESCHFSPDGKLLATGG---------------------------------HDKKAVLWCTESFTVKSTLE- 594 (655)
Q Consensus 549 ~~l~gH~~~V~sl~fSpdG~lLaSgs---------------------------------~DgtVrIWDl~t~~~l~tl~- 594 (655)
.....+...+.++.|||||++|++++ .+..|++||+.+++......
T Consensus 174 ~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~ 253 (706)
T 2z3z_A 174 AVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTG 253 (706)
T ss_dssp CCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCC
T ss_pred chhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccC
Confidence 01122334578999999999999998 44679999999988765543
Q ss_pred -ccCCCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCeEEEEEecccceeeeeceeeEEEec
Q 006229 595 -EHTQWITDVRFSPSLSRLATSSADR-----TVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAP 654 (655)
Q Consensus 595 -gH~~~ItsVafsPdg~~LaSgS~Dg-----tVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P 654 (655)
.|...|.+++|+|||++|++++.|+ +|++||+.+++++..+...........+.++.|+|
T Consensus 254 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp 319 (706)
T 2z3z_A 254 EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLP 319 (706)
T ss_dssp SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECT
T ss_pred CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeec
Confidence 5778899999999999999988876 89999999995444443221111111234567777
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.97 E-value=3.6e-09 Score=121.18 Aligned_cols=117 Identities=9% Similarity=0.011 Sum_probs=86.7
Q ss_pred CcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCc
Q 006229 499 PNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKK 578 (655)
Q Consensus 499 s~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~Dgt 578 (655)
...+.+.+++|++++. ++|.+|+...+.. ..+..+..|...|.+++|||||++|++++ ++.
T Consensus 113 ~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~-----------------~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~ 173 (741)
T 2ecf_A 113 DYQWSPDAQRLLFPLG-GELYLYDLKQEGK-----------------AAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRN 173 (741)
T ss_dssp CCEECTTSSEEEEEET-TEEEEEESSSCST-----------------TSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTE
T ss_pred eeEECCCCCEEEEEeC-CcEEEEECCCCCc-----------------ceEEEcccCCcccccccCCCCCCEEEEEe-CCc
Confidence 3455666677777665 7788885543300 01233456677899999999999999988 469
Q ss_pred EEEEeCCCCeEEEEecccCCC----------------EEEEEEcCCCCEEEEEeCCC-----------------------
Q 006229 579 AVLWCTESFTVKSTLEEHTQW----------------ITDVRFSPSLSRLATSSADR----------------------- 619 (655)
Q Consensus 579 VrIWDl~t~~~l~tl~gH~~~----------------ItsVafsPdg~~LaSgS~Dg----------------------- 619 (655)
|++||+.+++.......+... +.+++|+|||++|++++.|+
T Consensus 174 i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~ 253 (741)
T 2ecf_A 174 LWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRY 253 (741)
T ss_dssp EEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEEC
T ss_pred EEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeec
Confidence 999999998887666555443 47899999999999998876
Q ss_pred ----------cEEEEECCC-CeEEEE
Q 006229 620 ----------TVRVWDTEN-VRKLTF 634 (655)
Q Consensus 620 ----------tVrVWDl~t-g~~v~~ 634 (655)
.|++||+.+ +++...
T Consensus 254 ~~~g~~~~~~~l~~~d~~~~~~~~~~ 279 (741)
T 2ecf_A 254 PAAGDANVQVKLGVISPAEQAQTQWI 279 (741)
T ss_dssp CBTTSCCCEEEEEEECSSTTCCCEEE
T ss_pred CCCCCCCCeeEEEEEECCCCCceEEe
Confidence 899999998 775543
No 145
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.97 E-value=1.2e-08 Score=104.18 Aligned_cols=162 Identities=14% Similarity=0.061 Sum_probs=99.7
Q ss_pred eeccCCCCceEEEEecCCCCcccc-------cCcccCCCCcEEE-eccCCCcEEEEecCCCCCCCCccccccccCCCcee
Q 006229 474 LQHNGASSKSLLMFGSDGMGSLTS-------APNQLTDMDRFVD-DGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTF 545 (655)
Q Consensus 474 ~~~s~S~d~s~l~ws~dg~~~las-------ss~~l~~~~~~La-sGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~ 545 (655)
+..+.+.+..+.+|+.+....... ....+.+.+++++ ++..++.|.+|+..++. .
T Consensus 12 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~----------------~- 74 (331)
T 3u4y_A 12 GIVVEQHLRRISFFSTDTLEILNQITLGYDFVDTAITSDCSNVVVTSDFCQTLVQIETQLEP----------------P- 74 (331)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEEECCCCEEEEEECSSSCEEEEEESTTCEEEEEECSSSS----------------C-
T ss_pred EEEEecCCCeEEEEeCcccceeeeEEccCCcceEEEcCCCCEEEEEeCCCCeEEEEECCCCc----------------e-
Confidence 345555667778887764211110 1223444555443 44447778777554331 0
Q ss_pred eeEEeecCCCCCeeEEEEcCCCCEEEEEeCCC---cEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEE-EEeCCCc-
Q 006229 546 TEFQLIPASTSKVESCHFSPDGKLLATGGHDK---KAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLA-TSSADRT- 620 (655)
Q Consensus 546 ~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~Dg---tVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~La-SgS~Dgt- 620 (655)
....+..+...+.+++|+|||++|+++..++ .|++||+.+++.+..+..+ ..+.+++|+|+|++|+ ++..++.
T Consensus 75 -~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~ 152 (331)
T 3u4y_A 75 -KVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANT 152 (331)
T ss_dssp -EEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTE
T ss_pred -eEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCce
Confidence 1334445555565699999999999555553 8999999999998887644 4569999999998555 4456688
Q ss_pred EEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 621 VRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 621 VrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
|++|++.....+.... ............++|+|+
T Consensus 153 i~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~spd 186 (331)
T 3u4y_A 153 VRRFKIDADGVLFDTG-QEFISGGTRPFNITFTPD 186 (331)
T ss_dssp EEEEEECTTCCEEEEE-EEEECSSSSEEEEEECTT
T ss_pred EEEEEECCCCcEeecC-CccccCCCCccceEECCC
Confidence 9999998644432221 111111122456777775
No 146
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.97 E-value=2.2e-08 Score=101.53 Aligned_cols=86 Identities=12% Similarity=-0.082 Sum_probs=74.5
Q ss_pred cCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeE
Q 006229 552 PASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRK 631 (655)
Q Consensus 552 ~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~ 631 (655)
..+...+.+++|+|||++|+++ |+.|++||+.+++.+..+.. ...+.+++|+|++++|++++.|+.|++||+.+++.
T Consensus 237 ~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 237 RIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEK 313 (337)
T ss_dssp EECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCE
T ss_pred CCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcE
Confidence 3455667889999999999988 79999999999998887763 35688999999999999999999999999999999
Q ss_pred EEEEecccc
Q 006229 632 LTFICCYKC 640 (655)
Q Consensus 632 v~~l~~~~~ 640 (655)
+..+..+..
T Consensus 314 ~~~~~~~~~ 322 (337)
T 1pby_B 314 KGQVDLPGN 322 (337)
T ss_dssp EEEEECGGG
T ss_pred EEEEEcCCC
Confidence 998876644
No 147
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.96 E-value=1.4e-09 Score=121.65 Aligned_cols=82 Identities=15% Similarity=0.138 Sum_probs=73.0
Q ss_pred EeecCCCCCeeEEEEcCCCCEEEEEeCCC--cEEEEeCCCCeEEEEecccCCCEEEEE--------EcCCCCEEEEEeCC
Q 006229 549 QLIPASTSKVESCHFSPDGKLLATGGHDK--KAVLWCTESFTVKSTLEEHTQWITDVR--------FSPSLSRLATSSAD 618 (655)
Q Consensus 549 ~~l~gH~~~V~sl~fSpdG~lLaSgs~Dg--tVrIWDl~t~~~l~tl~gH~~~ItsVa--------fsPdg~~LaSgS~D 618 (655)
+.+..|...+.+++|||||++|+++..|+ .|++||++++++. .+.+|...|.+++ |+|||.++++++.|
T Consensus 188 ~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 266 (582)
T 3o4h_A 188 RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARRE 266 (582)
T ss_dssp EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEET
T ss_pred eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcC
Confidence 35677888899999999999999888888 8999999999888 8888988888888 99999999999999
Q ss_pred CcEEEEECCCCeEEE
Q 006229 619 RTVRVWDTENVRKLT 633 (655)
Q Consensus 619 gtVrVWDl~tg~~v~ 633 (655)
++++||++ ++++.
T Consensus 267 g~~~l~~~--g~~~~ 279 (582)
T 3o4h_A 267 GRSAVFID--GERVE 279 (582)
T ss_dssp TEEEEEET--TEEEC
T ss_pred CcEEEEEE--CCeec
Confidence 99999999 66553
No 148
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.95 E-value=9.4e-09 Score=115.65 Aligned_cols=143 Identities=10% Similarity=0.086 Sum_probs=106.8
Q ss_pred ceeccCCCCceEEEEecCCCCcc-------cccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCcee
Q 006229 473 TLQHNGASSKSLLMFGSDGMGSL-------TSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTF 545 (655)
Q Consensus 473 ~~~~s~S~d~s~l~ws~dg~~~l-------asss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~ 545 (655)
.+..+.+.+.++.+|+......+ ......+.+.+++|++++.|++|++|+.... +.
T Consensus 150 ~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~-----------------t~ 212 (543)
T 1nir_A 150 LFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAK-----------------EP 212 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSS-----------------SC
T ss_pred EEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCC-----------------CC
Confidence 45666777888888987653211 1123356777889999999999999965100 12
Q ss_pred eeEEeecCCCCCeeEEEEcC----CCCEEEEEeC-CCcEEEEeCCCCeEEEEecc----------cCC-CEEEEEEcCCC
Q 006229 546 TEFQLIPASTSKVESCHFSP----DGKLLATGGH-DKKAVLWCTESFTVKSTLEE----------HTQ-WITDVRFSPSL 609 (655)
Q Consensus 546 ~~v~~l~gH~~~V~sl~fSp----dG~lLaSgs~-DgtVrIWDl~t~~~l~tl~g----------H~~-~ItsVafsPdg 609 (655)
+++.++.. ...+.+|+|+| ||++|++++. |++|+|||..+++++.++.. |.. .|.+|.|+|++
T Consensus 213 ~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~ 291 (543)
T 1nir_A 213 TKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEH 291 (543)
T ss_dssp EEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSS
T ss_pred cEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCC
Confidence 44555553 45689999999 9999999985 89999999999999988864 333 79999999976
Q ss_pred C-EEEEEeCCCcEEEEECCCCeEEE
Q 006229 610 S-RLATSSADRTVRVWDTENVRKLT 633 (655)
Q Consensus 610 ~-~LaSgS~DgtVrVWDl~tg~~v~ 633 (655)
. ++++...|++|.+||+.+.+++.
T Consensus 292 ~~~~vs~~~~g~i~vvd~~~~~~l~ 316 (543)
T 1nir_A 292 PEFIVNVKETGKVLLVNYKDIDNLT 316 (543)
T ss_dssp SEEEEEETTTTEEEEEECTTSSSCE
T ss_pred CEEEEEECCCCeEEEEEecCCCcce
Confidence 5 56777789999999998876544
No 149
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.94 E-value=8.5e-09 Score=105.32 Aligned_cols=129 Identities=9% Similarity=0.014 Sum_probs=92.6
Q ss_pred cCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCC-CCeeEEEEcCCCCEE-EEEeCCCcE
Q 006229 502 LTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAST-SKVESCHFSPDGKLL-ATGGHDKKA 579 (655)
Q Consensus 502 l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~-~~V~sl~fSpdG~lL-aSgs~DgtV 579 (655)
+...+.++++++.|++|.+|+..++ +.+..+..+. ..+.+++|+|||+++ +++..++.|
T Consensus 7 ~~~~~~~~v~~~~~~~v~~~d~~~~-------------------~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i 67 (349)
T 1jmx_B 7 LKAGHEYMIVTNYPNNLHVVDVASD-------------------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDI 67 (349)
T ss_dssp CCTTCEEEEEEETTTEEEEEETTTT-------------------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEE
T ss_pred ccCCCEEEEEeCCCCeEEEEECCCC-------------------cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcE
Confidence 3445578888899999999965544 2333333332 257899999999865 455678999
Q ss_pred EEEeCCCCeEEEEecc-c-----CCCEEEEEEcCCCCEEEEEeCC------------CcEEEEECCCCe---EEEEEecc
Q 006229 580 VLWCTESFTVKSTLEE-H-----TQWITDVRFSPSLSRLATSSAD------------RTVRVWDTENVR---KLTFICCY 638 (655)
Q Consensus 580 rIWDl~t~~~l~tl~g-H-----~~~ItsVafsPdg~~LaSgS~D------------gtVrVWDl~tg~---~v~~l~~~ 638 (655)
++||+.+++.+..+.. + ...+.+++|+|+|++|++++.| +.|.+||+.+++ .+..+...
T Consensus 68 ~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~ 147 (349)
T 1jmx_B 68 YGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP 147 (349)
T ss_dssp EEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC
T ss_pred EEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC
Confidence 9999999998877763 3 2347899999999999999866 899999998843 33333332
Q ss_pred cceeeeeceeeEEEecC
Q 006229 639 KCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 639 ~~~v~s~~Vss~~F~P~ 655 (655)
. .+.+++|+|+
T Consensus 148 ~------~~~~~~~s~d 158 (349)
T 1jmx_B 148 R------QVYLMRAADD 158 (349)
T ss_dssp S------SCCCEEECTT
T ss_pred C------cccceeECCC
Confidence 2 2456667764
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.93 E-value=5.6e-09 Score=116.68 Aligned_cols=79 Identities=13% Similarity=-0.015 Sum_probs=70.0
Q ss_pred eEEEEcCCCCEEEEEeCC----CcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCC--cEEEEECCCCeEE
Q 006229 559 ESCHFSPDGKLLATGGHD----KKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADR--TVRVWDTENVRKL 632 (655)
Q Consensus 559 ~sl~fSpdG~lLaSgs~D----gtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~Dg--tVrVWDl~tg~~v 632 (655)
.+++|||||++|++++.| ..|++||+.+++.. .+.+|...+.+++|+|||++|+++..|+ .|++||+.++++.
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 789999999999988887 78999999988765 7788999999999999999999888999 8999999998877
Q ss_pred EEEeccc
Q 006229 633 TFICCYK 639 (655)
Q Consensus 633 ~~l~~~~ 639 (655)
.+..+.
T Consensus 232 -~~~~~~ 237 (582)
T 3o4h_A 232 -DLELPS 237 (582)
T ss_dssp -ECCCSC
T ss_pred -EccCCC
Confidence 555544
No 151
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.93 E-value=7.2e-09 Score=105.37 Aligned_cols=124 Identities=13% Similarity=0.080 Sum_probs=85.8
Q ss_pred EEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCC-CcEEEEeCC-
Q 006229 508 FVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHD-KKAVLWCTE- 585 (655)
Q Consensus 508 ~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~D-gtVrIWDl~- 585 (655)
++++++.|+.|++|+..... ....+..+ .|...+.+++|+|+|++|++++.+ +.|++|+++
T Consensus 7 l~~~~~~~~~v~~~~~~~~~----------------~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~ 69 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEG----------------ALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAP 69 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTS----------------CEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEEeCCCCCeEEEEEECCCC----------------cEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecC
Confidence 34555789999999653210 11222222 466779999999999999988887 999999997
Q ss_pred -CCe--EEEEecccCCCEEEEEEcCCCCEEEEEeC-CCcEEEEECC---CCeEEEEEecccceeeeeceeeEEEecC
Q 006229 586 -SFT--VKSTLEEHTQWITDVRFSPSLSRLATSSA-DRTVRVWDTE---NVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 586 -t~~--~l~tl~gH~~~ItsVafsPdg~~LaSgS~-DgtVrVWDl~---tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+++ .+..+..+. .+.+++|+|++++|++++. |+.|++||+. ..+.+..+..+. .+.+++|+|+
T Consensus 70 ~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~------~~~~~~~s~d 139 (343)
T 1ri6_A 70 DDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD------GCHSANISPD 139 (343)
T ss_dssp TTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT------TBCCCEECTT
T ss_pred CCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCC------CceEEEECCC
Confidence 554 445555444 8899999999998877765 8899999994 334444443322 2445666664
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.86 E-value=1.1e-08 Score=116.47 Aligned_cols=118 Identities=14% Similarity=0.081 Sum_probs=85.8
Q ss_pred CCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCC-----Ce
Q 006229 514 LDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES-----FT 588 (655)
Q Consensus 514 ~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t-----~~ 588 (655)
.|++|.+|+..++ ....+..+...|.+++|||||++|+++ .|+.|++||+.+ ++
T Consensus 99 ~~~~i~~~d~~~~--------------------~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 99 TQGGLVGFDMLAR--------------------KVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSR 157 (706)
T ss_dssp ETTEEEEEETTTT--------------------EEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCC
T ss_pred ECCEEEEEECCCC--------------------ceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCC
Confidence 3588888865433 123344566779999999999999985 689999999998 87
Q ss_pred EEEEecccCCC--------------EEEEEEcCCCCEEEEEe---------------------------------CCCcE
Q 006229 589 VKSTLEEHTQW--------------ITDVRFSPSLSRLATSS---------------------------------ADRTV 621 (655)
Q Consensus 589 ~l~tl~gH~~~--------------ItsVafsPdg~~LaSgS---------------------------------~DgtV 621 (655)
.......+... +.+++|+|||++|++++ .+..|
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 77655545443 48999999999999998 45679
Q ss_pred EEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 622 RVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 622 rVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
++||+.+++......... ....+.+++|+||
T Consensus 238 ~~~d~~~~~~~~~~~~~~---~~~~~~~~~~spd 268 (706)
T 2z3z_A 238 GIYHLATGKTVYLQTGEP---KEKFLTNLSWSPD 268 (706)
T ss_dssp EEEETTTTEEEECCCCSC---TTCEEEEEEECTT
T ss_pred EEEECCCCceEeeccCCC---CceeEeeEEEECC
Confidence 999999987654332211 1123567888875
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.86 E-value=3.6e-09 Score=121.04 Aligned_cols=105 Identities=12% Similarity=0.158 Sum_probs=78.3
Q ss_pred EEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCC---CeeEEEEcCCCCEEEEEeC---------
Q 006229 508 FVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTS---KVESCHFSPDGKLLATGGH--------- 575 (655)
Q Consensus 508 ~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~---~V~sl~fSpdG~lLaSgs~--------- 575 (655)
+++++ .|++|++|+...+ .+...+..|.. .|.+++|||||++|++++.
T Consensus 29 ~~~~~-~d~~i~~~~~~~g-------------------~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~ 88 (719)
T 1z68_A 29 YLHQS-ADNNIVLYNIETG-------------------QSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSY 88 (719)
T ss_dssp EEEEC-TTSCEEEEESSSC-------------------CEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred EEEEc-CCCCEEEEEcCCC-------------------cEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeec
Confidence 55554 4889999976554 12222233322 4889999999999999876
Q ss_pred CCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q 006229 576 DKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTF 634 (655)
Q Consensus 576 DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~ 634 (655)
|++|++||+.+++++... .....|.+++|+|||++||+++ |+.|++||+.++++...
T Consensus 89 ~~~i~~~d~~~g~~~~~~-~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l 145 (719)
T 1z68_A 89 TATYYIYDLSNGEFVRGN-ELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQI 145 (719)
T ss_dssp EEEEEEEETTTTEECCSS-CCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEEC
T ss_pred ceEEEEEECCCCccccce-ecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEE
Confidence 789999999999873111 1235689999999999999986 78999999998877543
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.85 E-value=1.1e-07 Score=99.03 Aligned_cols=96 Identities=17% Similarity=0.149 Sum_probs=68.8
Q ss_pred CCCCeeEEEEcCCCCEEEEEe-CCCcEEEEeCCCCeE--EEEe---cccCCCEEEEEEcCCCCEEEEEeCC--CcEEEEE
Q 006229 554 STSKVESCHFSPDGKLLATGG-HDKKAVLWCTESFTV--KSTL---EEHTQWITDVRFSPSLSRLATSSAD--RTVRVWD 625 (655)
Q Consensus 554 H~~~V~sl~fSpdG~lLaSgs-~DgtVrIWDl~t~~~--l~tl---~gH~~~ItsVafsPdg~~LaSgS~D--gtVrVWD 625 (655)
+...+.+++|+|||++|++++ .+++|++||+.+++. +..+ ..+...+.+++|+|||++|+++..+ ++|+||+
T Consensus 209 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~ 288 (361)
T 3scy_A 209 PGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFK 288 (361)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred CCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEE
Confidence 345678999999999887777 689999999987754 2223 3445567899999999998776654 8999999
Q ss_pred CC--CCe--EEEEEecccceeeeeceeeEEEecC
Q 006229 626 TE--NVR--KLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 626 l~--tg~--~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+. +++ .+..+.. ...+.+++|+|+
T Consensus 289 ~~~~~g~~~~~~~~~~------g~~~~~~~~spd 316 (361)
T 3scy_A 289 VDETNGTLTKVGYQLT------GIHPRNFIITPN 316 (361)
T ss_dssp ECTTTCCEEEEEEEEC------SSCCCEEEECTT
T ss_pred EcCCCCcEEEeeEecC------CCCCceEEECCC
Confidence 96 444 3333332 122446777775
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.83 E-value=9.2e-09 Score=117.65 Aligned_cols=118 Identities=14% Similarity=0.058 Sum_probs=79.8
Q ss_pred CCceEEEEecCCCCccc-----------ccCcccCCCCcEEEeccC---------CCcEEEEecCCCCCCCCcccccccc
Q 006229 480 SSKSLLMFGSDGMGSLT-----------SAPNQLTDMDRFVDDGSL---------DDNVESFLSPDDADPRDRVGRSAEV 539 (655)
Q Consensus 480 ~d~s~l~ws~dg~~~la-----------sss~~l~~~~~~LasGS~---------D~tV~vW~s~d~~d~~d~~~~l~d~ 539 (655)
.++.+.+|+.++..... +....+.+.+++|+.++. |++|++|+..++.
T Consensus 34 ~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~------------ 101 (719)
T 1z68_A 34 ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGE------------ 101 (719)
T ss_dssp TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE------------
T ss_pred CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCc------------
Confidence 36678888876632111 223345666777777665 6788888654441
Q ss_pred CCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEe-cccCCCE-----------------E
Q 006229 540 GKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTL-EEHTQWI-----------------T 601 (655)
Q Consensus 540 ~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl-~gH~~~I-----------------t 601 (655)
... ...+ ...|.+++|||||++|+++. |+.|++||+.++++.... .+|...| .
T Consensus 102 ----~~~-~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~ 172 (719)
T 1z68_A 102 ----FVR-GNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKY 172 (719)
T ss_dssp ----ECC-SSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSC
T ss_pred ----ccc-ceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcc
Confidence 000 0111 24588999999999999986 789999999988776433 3444433 4
Q ss_pred EEEEcCCCCEEEEEeCC
Q 006229 602 DVRFSPSLSRLATSSAD 618 (655)
Q Consensus 602 sVafsPdg~~LaSgS~D 618 (655)
+++|+|||++|++++.|
T Consensus 173 ~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 173 ALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp CEEECTTSSEEEEEEEE
T ss_pred cEEECCCCCEEEEEEEC
Confidence 89999999999999876
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.81 E-value=1.4e-07 Score=98.23 Aligned_cols=134 Identities=11% Similarity=0.045 Sum_probs=85.2
Q ss_pred ccCCCCcEEEecc-CCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCC--C
Q 006229 501 QLTDMDRFVDDGS-LDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHD--K 577 (655)
Q Consensus 501 ~l~~~~~~LasGS-~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~D--g 577 (655)
.+.+.+++++.++ .++.|.+|+..++. ......+.....+...+.+++|+|||++|++++.+ +
T Consensus 217 ~~spdg~~l~v~~~~~~~v~v~~~~~g~--------------~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~ 282 (361)
T 3scy_A 217 IFNSDGKFAYLINEIGGTVIAFRYADGM--------------LDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKAD 282 (361)
T ss_dssp EECTTSSEEEEEETTTCEEEEEEEETTE--------------EEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSC
T ss_pred EEcCCCCEEEEEcCCCCeEEEEEecCCc--------------eEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCC
Confidence 3455555554444 67888888554220 00111223333445567899999999988776654 8
Q ss_pred cEEEEeCC--CCe--EEEEecccCCCEEEEEEcCCCCEEEEEe-CCCcEEEEEC--CCCeEEEEEecccceeeeeceeeE
Q 006229 578 KAVLWCTE--SFT--VKSTLEEHTQWITDVRFSPSLSRLATSS-ADRTVRVWDT--ENVRKLTFICCYKCIFVSTAIGSC 650 (655)
Q Consensus 578 tVrIWDl~--t~~--~l~tl~gH~~~ItsVafsPdg~~LaSgS-~DgtVrVWDl--~tg~~v~~l~~~~~~v~s~~Vss~ 650 (655)
+|+||+++ +++ .+..+.. ...+.+++|+|+|++|++++ .++.|.||++ .+++..... + ......+.++
T Consensus 283 ~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~--~--~~~~~~p~~v 357 (361)
T 3scy_A 283 GVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK--K--DIKVDKPVCL 357 (361)
T ss_dssp EEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS--C--CEECSSEEEE
T ss_pred EEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc--e--eeeCCCCeEE
Confidence 99999996 444 4445544 56788999999999988888 6789999654 566644321 1 1122345567
Q ss_pred EEe
Q 006229 651 FFA 653 (655)
Q Consensus 651 ~F~ 653 (655)
.|.
T Consensus 358 ~~~ 360 (361)
T 3scy_A 358 KFV 360 (361)
T ss_dssp EEE
T ss_pred EEc
Confidence 775
No 157
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.79 E-value=2.7e-08 Score=119.71 Aligned_cols=124 Identities=6% Similarity=-0.053 Sum_probs=95.1
Q ss_pred CCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCC-CeeEEEEcCCCCEEEEEeCCCcEE-E
Q 006229 504 DMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTS-KVESCHFSPDGKLLATGGHDKKAV-L 581 (655)
Q Consensus 504 ~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~-~V~sl~fSpdG~lLaSgs~DgtVr-I 581 (655)
+.+++|+.++ ++.|.+|....+ ....+..|.. .|.+++|+ ||+.|++++.+..|. +
T Consensus 306 pdG~~la~~~-~~~i~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~ 363 (1045)
T 1k32_A 306 LDGDLIAFVS-RGQAFIQDVSGT--------------------YVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGI 363 (1045)
T ss_dssp CGGGCEEEEE-TTEEEEECTTSS--------------------BEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEE
T ss_pred CCCCEEEEEE-cCEEEEEcCCCC--------------------ceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEE
Confidence 4444555555 667777743322 1233556767 89999999 999999999988898 9
Q ss_pred EeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 582 WCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 582 WDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
||+.+++... +.+|...|.+++|+|||++|++++.|+.|++||+.++++...+..+... +.+++|+||
T Consensus 364 ~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~-----v~~~~~SpD 431 (1045)
T 1k32_A 364 YDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAM-----ITDFTISDN 431 (1045)
T ss_dssp EETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSC-----CCCEEECTT
T ss_pred EECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCC-----ccceEECCC
Confidence 9998877654 4489899999999999999999999999999999999887776555432 446777775
No 158
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.79 E-value=2.2e-07 Score=96.02 Aligned_cols=133 Identities=17% Similarity=0.122 Sum_probs=82.4
Q ss_pred cCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCC-CCCeeEEEEcCCCCEEEE-EeCCCcE
Q 006229 502 LTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAS-TSKVESCHFSPDGKLLAT-GGHDKKA 579 (655)
Q Consensus 502 l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH-~~~V~sl~fSpdG~lLaS-gs~DgtV 579 (655)
+.+.+++++++..++.|.+|+.... + ....+..+..+ ...+..++|+|||++|++ +..++.|
T Consensus 148 ~spdg~l~v~~~~~~~v~~~~~~~~---------------g-~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v 211 (347)
T 3hfq_A 148 LTPDNRLAVIDLGSDKVYVYNVSDA---------------G-QLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQI 211 (347)
T ss_dssp ECTTSCEEEEETTTTEEEEEEECTT---------------S-CEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred ECCCCcEEEEeCCCCEEEEEEECCC---------------C-cEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEE
Confidence 3444455556656677777754411 1 11222222222 235788999999996555 5678999
Q ss_pred EEEeCCC--CeE--EEEecccC------CCEEEEEEcCCCCEE-EEEeCCCcEEEEECCC---CeEEEEEecccceeeee
Q 006229 580 VLWCTES--FTV--KSTLEEHT------QWITDVRFSPSLSRL-ATSSADRTVRVWDTEN---VRKLTFICCYKCIFVST 645 (655)
Q Consensus 580 rIWDl~t--~~~--l~tl~gH~------~~ItsVafsPdg~~L-aSgS~DgtVrVWDl~t---g~~v~~l~~~~~~v~s~ 645 (655)
++||++. ++. +..+..+. ..+.+++|+|+|++| +++..+++|+|||+.. .+.+..+..+..
T Consensus 212 ~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~----- 286 (347)
T 3hfq_A 212 ASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGD----- 286 (347)
T ss_dssp EEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSS-----
T ss_pred EEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCC-----
Confidence 9999874 543 33333332 458999999999987 5666799999999972 244444444322
Q ss_pred ceeeEEEecC
Q 006229 646 AIGSCFFAPT 655 (655)
Q Consensus 646 ~Vss~~F~P~ 655 (655)
.+..++|+|+
T Consensus 287 ~~~~~~~spd 296 (347)
T 3hfq_A 287 FPRDFDLDPT 296 (347)
T ss_dssp CCCEEEECTT
T ss_pred CcCeEEECCC
Confidence 2346777775
No 159
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.78 E-value=1.2e-07 Score=97.81 Aligned_cols=145 Identities=12% Similarity=0.251 Sum_probs=93.2
Q ss_pred ceeccCCCCceEEEEecCCCCccc------c------cCcccCCCCcE-EEeccCCCcEEEEecCCCCCCCCcccccccc
Q 006229 473 TLQHNGASSKSLLMFGSDGMGSLT------S------APNQLTDMDRF-VDDGSLDDNVESFLSPDDADPRDRVGRSAEV 539 (655)
Q Consensus 473 ~~~~s~S~d~s~l~ws~dg~~~la------s------ss~~l~~~~~~-LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~ 539 (655)
.+..+...+..+.+|+.+..+.+. . ....+.+.+++ ++++..++.|.+|......
T Consensus 153 ~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~------------ 220 (347)
T 3hfq_A 153 RLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT------------ 220 (347)
T ss_dssp CEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTT------------
T ss_pred cEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCC------------
Confidence 344455556677778776322211 0 01144555554 4445667888888543210
Q ss_pred CCCceeeeEEeecCCC------CCeeEEEEcCCCCEE-EEEeCCCcEEEEeCC---CCeEEEEecccCCCEEEEEEcCCC
Q 006229 540 GKGFTFTEFQLIPAST------SKVESCHFSPDGKLL-ATGGHDKKAVLWCTE---SFTVKSTLEEHTQWITDVRFSPSL 609 (655)
Q Consensus 540 ~~~~t~~~v~~l~gH~------~~V~sl~fSpdG~lL-aSgs~DgtVrIWDl~---t~~~l~tl~gH~~~ItsVafsPdg 609 (655)
+ .+..+..+.... ..+.+++|+|||++| +++..++.|++||+. +.+.+..+..|...+.+++|+|+|
T Consensus 221 --g-~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg 297 (347)
T 3hfq_A 221 --G-AFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTE 297 (347)
T ss_dssp --T-EEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTS
T ss_pred --C-ceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCC
Confidence 0 112222222222 358899999999977 556678999999997 336666777777789999999999
Q ss_pred CEEEEEeCC-CcEEEE--ECCCCeEE
Q 006229 610 SRLATSSAD-RTVRVW--DTENVRKL 632 (655)
Q Consensus 610 ~~LaSgS~D-gtVrVW--Dl~tg~~v 632 (655)
++|++++.+ +.|.|| |..+++..
T Consensus 298 ~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 298 AFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp SEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 998888864 899999 55566654
No 160
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.78 E-value=1.6e-07 Score=95.83 Aligned_cols=143 Identities=10% Similarity=-0.030 Sum_probs=94.2
Q ss_pred ceeccCCCCceEEEEecCCCCcc---c------ccCcccCCCCcE-EEeccCCCcEEEEecCCCCCCCCccccccccCCC
Q 006229 473 TLQHNGASSKSLLMFGSDGMGSL---T------SAPNQLTDMDRF-VDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKG 542 (655)
Q Consensus 473 ~~~~s~S~d~s~l~ws~dg~~~l---a------sss~~l~~~~~~-LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~ 542 (655)
.+..+.+.+..+.+|+....... . .....+.+.+++ ++++..++.|.+|+..++
T Consensus 12 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~---------------- 75 (349)
T 1jmx_B 12 EYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC---------------- 75 (349)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTT----------------
T ss_pred EEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCC----------------
Confidence 45666667888888887653211 1 111133444443 445556777888855433
Q ss_pred ceeeeEEeecCC------CCCeeEEEEcCCCCEEEEEeCC------------CcEEEEeCCCCe---EEEEecccCCCEE
Q 006229 543 FTFTEFQLIPAS------TSKVESCHFSPDGKLLATGGHD------------KKAVLWCTESFT---VKSTLEEHTQWIT 601 (655)
Q Consensus 543 ~t~~~v~~l~gH------~~~V~sl~fSpdG~lLaSgs~D------------gtVrIWDl~t~~---~l~tl~gH~~~It 601 (655)
+.+..+..+ ...+.+++|+|||++|++++.+ +.|.+||+.+++ .+..+. +...|.
T Consensus 76 ---~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~ 151 (349)
T 1jmx_B 76 ---KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVY 151 (349)
T ss_dssp ---EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCC
T ss_pred ---cEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCccc
Confidence 222222221 2237899999999999998866 899999998843 344444 344689
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecc
Q 006229 602 DVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCY 638 (655)
Q Consensus 602 sVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~ 638 (655)
+++|+|+|+ |+.++. .|++||+.+++.+..+..+
T Consensus 152 ~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~ 185 (349)
T 1jmx_B 152 LMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLR 185 (349)
T ss_dssp CEEECTTSC-EEEESS--SEEEECTTTCCEEEEECST
T ss_pred ceeECCCCc-EEEccC--cEEEEeCCCCceecccccc
Confidence 999999999 666544 4999999999988777544
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.71 E-value=2.9e-08 Score=114.90 Aligned_cols=103 Identities=17% Similarity=0.147 Sum_probs=80.1
Q ss_pred EEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCC-----eeEEEEcCCCCEEEEEeCC------
Q 006229 508 FVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSK-----VESCHFSPDGKLLATGGHD------ 576 (655)
Q Consensus 508 ~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~-----V~sl~fSpdG~lLaSgs~D------ 576 (655)
+++++ |++|++|+..++ .+...+.+|... ...+.|||||++|+.++.+
T Consensus 30 ~~~~~--~~~i~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~ 88 (740)
T 4a5s_A 30 YLYKQ--ENNILVFNAEYG-------------------NSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRH 88 (740)
T ss_dssp EEEEE--TTEEEEEETTTC-------------------CEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSS
T ss_pred EEEEc--CCcEEEEECCCC-------------------ceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEE
Confidence 66665 899999976555 223334444432 3458899999999999887
Q ss_pred ---CcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEE
Q 006229 577 ---KKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLT 633 (655)
Q Consensus 577 ---gtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~ 633 (655)
+.+.|||+.++++. .+..|...+..++|||||+.||.++ |+.|++||+.++.+..
T Consensus 89 ~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~ 146 (740)
T 4a5s_A 89 SYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYR 146 (740)
T ss_dssp CEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEE
T ss_pred ccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEE
Confidence 44569999999866 5778888999999999999999985 6899999999887554
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.70 E-value=9.8e-07 Score=92.75 Aligned_cols=78 Identities=12% Similarity=0.077 Sum_probs=61.9
Q ss_pred CCCCeeEEEEcCCCCEEEEEeC-CCcEEEEeCC-CCeEE--EEec--ccCCCEEEEEEcCCCCEEEEEeC-CCcEEEEEC
Q 006229 554 STSKVESCHFSPDGKLLATGGH-DKKAVLWCTE-SFTVK--STLE--EHTQWITDVRFSPSLSRLATSSA-DRTVRVWDT 626 (655)
Q Consensus 554 H~~~V~sl~fSpdG~lLaSgs~-DgtVrIWDl~-t~~~l--~tl~--gH~~~ItsVafsPdg~~LaSgS~-DgtVrVWDl 626 (655)
+...+.+++|+|||++|++++. +..|++||++ +++.. ..+. .|...+..++|+|+|++|++++. +++|.+|++
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~ 222 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVI 222 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEE
Confidence 4567999999999998887764 6899999998 77653 3343 34677999999999999988875 789999987
Q ss_pred C--CCeE
Q 006229 627 E--NVRK 631 (655)
Q Consensus 627 ~--tg~~ 631 (655)
+ +++.
T Consensus 223 ~~~~g~~ 229 (365)
T 1jof_A 223 DPATHMP 229 (365)
T ss_dssp CTTTCCE
T ss_pred eCCCCcE
Confidence 5 5654
No 163
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.66 E-value=9.9e-08 Score=107.84 Aligned_cols=81 Identities=14% Similarity=0.098 Sum_probs=64.4
Q ss_pred CCCCCeeEEEEcCCCCEEEEEeCCC--------cEEEEeCC-CC---eEEEEecccCCCEEEEEEcCCCCEEEEEeCCC-
Q 006229 553 ASTSKVESCHFSPDGKLLATGGHDK--------KAVLWCTE-SF---TVKSTLEEHTQWITDVRFSPSLSRLATSSADR- 619 (655)
Q Consensus 553 gH~~~V~sl~fSpdG~lLaSgs~Dg--------tVrIWDl~-t~---~~l~tl~gH~~~ItsVafsPdg~~LaSgS~Dg- 619 (655)
.+...+.+++|||||++|+.++.|+ .|++||+. ++ +......+|...+.+++|+|||+++++++.|+
T Consensus 185 ~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~ 264 (662)
T 3azo_A 185 DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGW 264 (662)
T ss_dssp SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSS
T ss_pred cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCC
Confidence 4456788899999999999888653 79999999 57 55555566788999999999999888888888
Q ss_pred -cEEEEECCCCeEEE
Q 006229 620 -TVRVWDTENVRKLT 633 (655)
Q Consensus 620 -tVrVWDl~tg~~v~ 633 (655)
.|.+||+.+++...
T Consensus 265 ~~l~~~~~~~~~~~~ 279 (662)
T 3azo_A 265 WNLHRVDPATGAATQ 279 (662)
T ss_dssp CEEEEECTTTCCEEE
T ss_pred eEEEEEECCCCceee
Confidence 56666766666543
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.64 E-value=1.8e-07 Score=108.37 Aligned_cols=68 Identities=16% Similarity=0.117 Sum_probs=53.2
Q ss_pred eecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE-EecccCCCE-----------------EEEEEcCCCCE
Q 006229 550 LIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKS-TLEEHTQWI-----------------TDVRFSPSLSR 611 (655)
Q Consensus 550 ~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~-tl~gH~~~I-----------------tsVafsPdg~~ 611 (655)
.+..|...+..++|||||+.||.+. |+.|++||+.++.+.. +..++...| ..+.|||||++
T Consensus 106 ~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~ 184 (740)
T 4a5s_A 106 TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTF 184 (740)
T ss_dssp CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSE
T ss_pred EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCE
Confidence 4566778899999999999998884 7899999999887654 233444433 35899999999
Q ss_pred EEEEeCC
Q 006229 612 LATSSAD 618 (655)
Q Consensus 612 LaSgS~D 618 (655)
||.++.|
T Consensus 185 la~~~~d 191 (740)
T 4a5s_A 185 LAYAQFN 191 (740)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 9998754
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.57 E-value=1e-06 Score=92.68 Aligned_cols=79 Identities=10% Similarity=0.059 Sum_probs=58.7
Q ss_pred CCCCeeEEEEcCCCCEEEEEeC-CCcEEEEeCC--CCeEE------EEec----ccCC------CEEEEE-EcCCCCEEE
Q 006229 554 STSKVESCHFSPDGKLLATGGH-DKKAVLWCTE--SFTVK------STLE----EHTQ------WITDVR-FSPSLSRLA 613 (655)
Q Consensus 554 H~~~V~sl~fSpdG~lLaSgs~-DgtVrIWDl~--t~~~l------~tl~----gH~~------~ItsVa-fsPdg~~La 613 (655)
|...+..++|+|||++|++++. +++|.+|+++ +++.. ..+. +|.. .+.+++ |+|||++|+
T Consensus 191 ~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~ 270 (365)
T 1jof_A 191 PGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMF 270 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEE
T ss_pred CCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEE
Confidence 4567899999999999888775 6899999875 56542 1222 2333 589999 999999988
Q ss_pred EEeCCC------cEEEEECC-CCeEE
Q 006229 614 TSSADR------TVRVWDTE-NVRKL 632 (655)
Q Consensus 614 SgS~Dg------tVrVWDl~-tg~~v 632 (655)
+++.+. +|+|||+. +++..
T Consensus 271 v~~~~~~~~~~~~i~v~~~~~~g~~~ 296 (365)
T 1jof_A 271 ASSRANKFELQGYIAGFKLRDCGSIE 296 (365)
T ss_dssp EEEEESSTTSCCEEEEEEECTTSCEE
T ss_pred EECCCCCCCCCCeEEEEEECCCCCEE
Confidence 776532 89999996 56544
No 166
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.54 E-value=4e-07 Score=98.61 Aligned_cols=121 Identities=13% Similarity=-0.054 Sum_probs=85.5
Q ss_pred cEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 006229 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES 586 (655)
Q Consensus 507 ~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t 586 (655)
.+|+++ .++.|++|+...- . .......|...|.+|.+.+. .++++..||+|.+||+.+
T Consensus 98 ~~L~v~-~~~~l~v~dv~sl----------------~---~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~ 155 (388)
T 1xip_A 98 DQVLVS-TRNALYSLDLEEL----------------S---EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRT 155 (388)
T ss_dssp TEEEEE-ESSEEEEEESSST----------------T---CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTT
T ss_pred CEEEEE-cCCcEEEEEchhh----------------h---ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccC
Confidence 555665 6677777754332 1 12233455667888887754 388899999999999998
Q ss_pred CeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeE--EEEEeccccee----eeeceeeEEEecC
Q 006229 587 FTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRK--LTFICCYKCIF----VSTAIGSCFFAPT 655 (655)
Q Consensus 587 ~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~--v~~l~~~~~~v----~s~~Vss~~F~P~ 655 (655)
+.... +...|+|++|+|+| ++.|..||+|++|+...+.+ ..++.+....- ....|.++.|.++
T Consensus 156 ~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~ 224 (388)
T 1xip_A 156 KSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSP 224 (388)
T ss_dssp CCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSS
T ss_pred Ccccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecC
Confidence 77653 55689999999999 78899999999999998886 66774322111 1344667777653
No 167
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.53 E-value=3.5e-06 Score=89.27 Aligned_cols=88 Identities=11% Similarity=0.013 Sum_probs=71.8
Q ss_pred EEEEcCCCCEEEEEeC-----------CCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 006229 560 SCHFSPDGKLLATGGH-----------DKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTEN 628 (655)
Q Consensus 560 sl~fSpdG~lLaSgs~-----------DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~t 628 (655)
-++|++|++.++++.. +.+|.+||+.+++.+.++..|. +.+|+|+|+|++|++++. ++|.|||+.+
T Consensus 258 ~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t 334 (361)
T 2oiz_A 258 LVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQ 334 (361)
T ss_dssp CEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSS
T ss_pred EEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCC
Confidence 3789999887777643 3589999999999999998877 999999999999999887 9999999999
Q ss_pred C--eEEEEEecccceeeeeceeeEEEecC
Q 006229 629 V--RKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 629 g--~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+ +.+..+...... ...++|+|+
T Consensus 335 ~~l~~~~~i~~~G~~-----P~~~~~~p~ 358 (361)
T 2oiz_A 335 PEPKLLRTIEGAAEA-----SLQVQFHPV 358 (361)
T ss_dssp SSCEEEEEETTSCSS-----EEEEEECCC
T ss_pred CcceeeEEeccCCCC-----cEEEEecCC
Confidence 9 999887433222 225677775
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.51 E-value=5.8e-07 Score=93.76 Aligned_cols=95 Identities=15% Similarity=0.065 Sum_probs=77.0
Q ss_pred eeEEeecCCCCCeeE-----EEEcCCCCEEEEEeC-CCc--EEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeC
Q 006229 546 TEFQLIPASTSKVES-----CHFSPDGKLLATGGH-DKK--AVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSA 617 (655)
Q Consensus 546 ~~v~~l~gH~~~V~s-----l~fSpdG~lLaSgs~-Dgt--VrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~ 617 (655)
.++..+..|...+.. ++|||||++|+.++. |+. |.+||+.+++......+|...+.+++|+|||++|+.++.
T Consensus 21 ~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~ 100 (388)
T 3pe7_A 21 AQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKD 100 (388)
T ss_dssp CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEET
T ss_pred cceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeC
Confidence 345566666655555 889999999999887 664 888899999988877788777778899999999999999
Q ss_pred CCcEEEEECCCCeEEEEEecccc
Q 006229 618 DRTVRVWDTENVRKLTFICCYKC 640 (655)
Q Consensus 618 DgtVrVWDl~tg~~v~~l~~~~~ 640 (655)
|+.|++||+.+++....+..+..
T Consensus 101 ~~~l~~~d~~~g~~~~~~~~~~~ 123 (388)
T 3pe7_A 101 GRNLMRVDLATLEENVVYQVPAE 123 (388)
T ss_dssp TTEEEEEETTTCCEEEEEECCTT
T ss_pred CCeEEEEECCCCcceeeeechhh
Confidence 99999999999987766554443
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.50 E-value=7e-07 Score=100.84 Aligned_cols=96 Identities=14% Similarity=0.107 Sum_probs=72.8
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCC----------CcEEEEeCCC------CeEEEEec-ccCCCEEEEEEcCCCCEEEEEe
Q 006229 554 STSKVESCHFSPDGKLLATGGHD----------KKAVLWCTES------FTVKSTLE-EHTQWITDVRFSPSLSRLATSS 616 (655)
Q Consensus 554 H~~~V~sl~fSpdG~lLaSgs~D----------gtVrIWDl~t------~~~l~tl~-gH~~~ItsVafsPdg~~LaSgS 616 (655)
|...+.+++|||||++|++++.| ..|++||+.+ ++.. .+. .+...+.+++|+|||++|+.++
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG~~la~~~ 206 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRLSPDGRQAVWLA 206 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEECTTSSEEEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceECCCCCEEEEEE
Confidence 56678899999999999999887 5899999988 5544 555 6677899999999999999888
Q ss_pred CCC--------cEEEEECC-CC---eEEEEEecccceeeeeceeeEEEecC
Q 006229 617 ADR--------TVRVWDTE-NV---RKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 617 ~Dg--------tVrVWDl~-tg---~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
.|+ .|++||+. ++ ........+.. .+..++|+||
T Consensus 207 ~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~-----~~~~~~~spd 252 (662)
T 3azo_A 207 WDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEE-----AIAQAEWAPD 252 (662)
T ss_dssp ECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTB-----CEEEEEECTT
T ss_pred CCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCc-----eEcceEECCC
Confidence 653 79999999 57 33333322222 3456777775
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.50 E-value=5e-06 Score=83.39 Aligned_cols=98 Identities=4% Similarity=-0.015 Sum_probs=73.4
Q ss_pred CCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecc--cCCCEEEEEEcCCCCEEEEEeCCC-cEEEEECCCC
Q 006229 553 ASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEE--HTQWITDVRFSPSLSRLATSSADR-TVRVWDTENV 629 (655)
Q Consensus 553 gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~g--H~~~ItsVafsPdg~~LaSgS~Dg-tVrVWDl~tg 629 (655)
.+...+.+|+|+++|+++++...++.|++||.. ++.+.++.. +...+..|+++++|+++++...++ .|++||. ++
T Consensus 161 ~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g 238 (286)
T 1q7f_A 161 KHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DG 238 (286)
T ss_dssp TTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TS
T ss_pred CccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CC
Confidence 345568999999999988888889999999974 566666653 346899999999999999988886 9999996 46
Q ss_pred eEEEEEecccceeeeeceeeEEEecC
Q 006229 630 RKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 630 ~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+.+..+..+... ..+.+++|+|+
T Consensus 239 ~~~~~~~~~~~~---~~~~~i~~~~~ 261 (286)
T 1q7f_A 239 QLISALESKVKH---AQCFDVALMDD 261 (286)
T ss_dssp CEEEEEEESSCC---SCEEEEEEETT
T ss_pred CEEEEEcccCCC---CcceeEEECCC
Confidence 677666554321 11335566553
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.47 E-value=2.2e-06 Score=88.98 Aligned_cols=164 Identities=8% Similarity=0.031 Sum_probs=103.2
Q ss_pred CceeccCCCCceEEEEecCCCC--cccc----------------cCcccCC-CCcEEEecc-CCCcEEEEecCCCCCCCC
Q 006229 472 PTLQHNGASSKSLLMFGSDGMG--SLTS----------------APNQLTD-MDRFVDDGS-LDDNVESFLSPDDADPRD 531 (655)
Q Consensus 472 ~~~~~s~S~d~s~l~ws~dg~~--~las----------------ss~~l~~-~~~~LasGS-~D~tV~vW~s~d~~d~~d 531 (655)
..+..+...+..+..|++++.. .... ....+++ .+.++++.+ .++.|++|+ .++.
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~---- 176 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGK---- 176 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSC----
T ss_pred CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCC----
Confidence 3455666667888899888752 1111 0113344 445555554 467777774 2221
Q ss_pred ccccccccCCCceeeeEEee-------cCCCCCeeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeEEEEec--ccCCCEE
Q 006229 532 RVGRSAEVGKGFTFTEFQLI-------PASTSKVESCHFSPD-GKLLATGGHDKKAVLWCTESFTVKSTLE--EHTQWIT 601 (655)
Q Consensus 532 ~~~~l~d~~~~~t~~~v~~l-------~gH~~~V~sl~fSpd-G~lLaSgs~DgtVrIWDl~t~~~l~tl~--gH~~~It 601 (655)
....+... .++......|+|+++ +.++++...++.|++||.++++.+.++. ++...+.
T Consensus 177 ------------~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~ 244 (329)
T 3fvz_A 177 ------------FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVF 244 (329)
T ss_dssp ------------EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEE
T ss_pred ------------EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcc
Confidence 00111000 122234789999998 7788888889999999999899988884 5677899
Q ss_pred EEEEcCCCCEEEEE-------eCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 602 DVRFSPSLSRLATS-------SADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 602 sVafsPdg~~LaSg-------S~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
+++|+| +..+++. +.+.+|++||+.+++.+..+..... .......++|+|+
T Consensus 245 ~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~--~~~~p~~ia~~~d 302 (329)
T 3fvz_A 245 AISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRK--HFDMPHDIVASED 302 (329)
T ss_dssp EEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSS--CCSSEEEEEECTT
T ss_pred eeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCC--ccCCeeEEEECCC
Confidence 999999 4444433 3455899999999999888742211 1122345666664
No 172
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.47 E-value=3.3e-06 Score=87.95 Aligned_cols=100 Identities=11% Similarity=0.110 Sum_probs=73.7
Q ss_pred EeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEE--cCCCCEEEEE-----------
Q 006229 549 QLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRF--SPSLSRLATS----------- 615 (655)
Q Consensus 549 ~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVaf--sPdg~~LaSg----------- 615 (655)
....++...+.++.|+|||+.|+.++.++.|++||+.+++....+..+...+....| +|++++|+..
T Consensus 74 ~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~ 153 (388)
T 3pe7_A 74 QLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLT 153 (388)
T ss_dssp ECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC
T ss_pred EeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCccccccc
Confidence 334455555667899999999999999999999999999888777777776655544 8999998753
Q ss_pred -----------eCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEec
Q 006229 616 -----------SADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAP 654 (655)
Q Consensus 616 -----------S~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P 654 (655)
..+..|.+||+.+++...... +.. .+..+.|+|
T Consensus 154 ~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~-----~~~~~~~sp 197 (388)
T 3pe7_A 154 DWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ-ENQ-----WLGHPIYRP 197 (388)
T ss_dssp SHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE-ESS-----CEEEEEEET
T ss_pred ccchhhhhhccCCcceEEEEECCCCceEEeec-CCc-----cccccEECC
Confidence 245689999999887544332 222 244667777
No 173
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.46 E-value=3.9e-06 Score=84.21 Aligned_cols=135 Identities=13% Similarity=0.141 Sum_probs=89.0
Q ss_pred ceeccCCCCceEEEEecCCCCcccc---------cCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCc
Q 006229 473 TLQHNGASSKSLLMFGSDGMGSLTS---------APNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGF 543 (655)
Q Consensus 473 ~~~~s~S~d~s~l~ws~dg~~~las---------ss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~ 543 (655)
.+..+......+..|++++...... ....++..++++++.+.++.|.+|+. ++
T Consensus 133 ~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g----------------- 194 (286)
T 1q7f_A 133 RIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EG----------------- 194 (286)
T ss_dssp CEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TC-----------------
T ss_pred CEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CC-----------------
Confidence 3444444566777788766421111 11133444455555556677777743 11
Q ss_pred eeeeEEeec--CCCCCeeEEEEcCCCCEEEEEeCCC-cEEEEeCCCCeEEEEecccCC--CEEEEEEcCCCCEEEEEeCC
Q 006229 544 TFTEFQLIP--ASTSKVESCHFSPDGKLLATGGHDK-KAVLWCTESFTVKSTLEEHTQ--WITDVRFSPSLSRLATSSAD 618 (655)
Q Consensus 544 t~~~v~~l~--gH~~~V~sl~fSpdG~lLaSgs~Dg-tVrIWDl~t~~~l~tl~gH~~--~ItsVafsPdg~~LaSgS~D 618 (655)
..+..+. ++...+..|+|+++|+++++...++ .|++||. +++.+.++..+.. .+.+|+|+|+|+++++ +.|
T Consensus 195 --~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~ 270 (286)
T 1q7f_A 195 --QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKD 270 (286)
T ss_dssp --CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETT
T ss_pred --CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCC
Confidence 1222232 2335788999999999999888886 9999995 5677777765543 4889999999987777 679
Q ss_pred CcEEEEECCCC
Q 006229 619 RTVRVWDTENV 629 (655)
Q Consensus 619 gtVrVWDl~tg 629 (655)
++|+||++...
T Consensus 271 ~~v~v~~~~~~ 281 (286)
T 1q7f_A 271 YRLYIYRYVQL 281 (286)
T ss_dssp TEEEEEECSCC
T ss_pred CeEEEEEcccc
Confidence 99999998653
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.43 E-value=1.7e-06 Score=88.68 Aligned_cols=89 Identities=11% Similarity=0.090 Sum_probs=73.1
Q ss_pred eEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCC----CcEE
Q 006229 547 EFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSAD----RTVR 622 (655)
Q Consensus 547 ~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~D----gtVr 622 (655)
.+..+..+...+.+++|+++|++++++..++.|.+||..+++....+..+...|.+++|+|+|+++++...+ +.|.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~ 115 (333)
T 2dg1_A 36 PWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIF 115 (333)
T ss_dssp EEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEE
T ss_pred eeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEE
Confidence 344555666778999999999988899999999999999888776555677889999999999988888777 7899
Q ss_pred EEECCCCeEEEEE
Q 006229 623 VWDTENVRKLTFI 635 (655)
Q Consensus 623 VWDl~tg~~v~~l 635 (655)
+||..++.....+
T Consensus 116 ~~d~~~~~~~~~~ 128 (333)
T 2dg1_A 116 AATENGDNLQDII 128 (333)
T ss_dssp EECTTSCSCEEEE
T ss_pred EEeCCCCEEEEEE
Confidence 9999887654333
No 175
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.40 E-value=1.8e-06 Score=88.73 Aligned_cols=91 Identities=20% Similarity=0.216 Sum_probs=69.1
Q ss_pred CCeeEEEEcCCCCEEEEEeCC---C--cEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCC------------
Q 006229 556 SKVESCHFSPDGKLLATGGHD---K--KAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSAD------------ 618 (655)
Q Consensus 556 ~~V~sl~fSpdG~lLaSgs~D---g--tVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~D------------ 618 (655)
..+.++.|||||++|+.++.+ + .|.+||+.+++.......+ . |.+++|+|||++|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 458899999999999887754 2 3788899888776555433 3 9999999999999888743
Q ss_pred ---------------CcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 619 ---------------RTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 619 ---------------gtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
..|.+||+.+++.+..+.. . .+..++|+|+
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~------~~~~~~~spd 181 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P------RFSSGIWHRD 181 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTEEEEEEEE-E------TTCEEEEETT
T ss_pred cceeecCcccccCccceEEEEECCCCeEEeeecC-C------CcccccCCCC
Confidence 5699999999887555543 1 3556777775
No 176
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.39 E-value=1.3e-06 Score=94.67 Aligned_cols=87 Identities=9% Similarity=0.037 Sum_probs=73.2
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEE
Q 006229 554 STSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLT 633 (655)
Q Consensus 554 H~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~ 633 (655)
+.. |+.|+| |+++|+++ .++.|++||+++......+..|...|.++.+.+. .+++++.||.|.+||+.++....
T Consensus 87 lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~ 160 (388)
T 1xip_A 87 IPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ 160 (388)
T ss_dssp CTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE
T ss_pred CCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc
Confidence 455 999999 99999999 8899999999988777777888889999888764 39999999999999999887643
Q ss_pred EEecccceeeeeceeeEEEecC
Q 006229 634 FICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 634 ~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
....|.+++|+|+
T Consensus 161 ---------~~~~Vs~v~WSpk 173 (388)
T 1xip_A 161 ---------LAQNVTSFDVTNS 173 (388)
T ss_dssp ---------EEESEEEEEECSS
T ss_pred ---------ccCCceEEEEcCC
Confidence 2346789999985
No 177
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.38 E-value=1.6e-05 Score=82.43 Aligned_cols=127 Identities=9% Similarity=0.051 Sum_probs=86.5
Q ss_pred ccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcC-CCCEEEEEe-CCCc
Q 006229 501 QLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSP-DGKLLATGG-HDKK 578 (655)
Q Consensus 501 ~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSp-dG~lLaSgs-~Dgt 578 (655)
.++..++++++.+.++.|+.|+.... ...+... ... .....-.++......|+|+| +|.++++.+ .++.
T Consensus 97 a~d~~g~l~v~d~~~~~v~~~~~~g~----~~~~~~~--~~~---~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~ 167 (329)
T 3fvz_A 97 SIDTDGNYWVTDVALHQVFKLDPHSK----EGPLLIL--GRS---MQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSR 167 (329)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTCS----SCCSEEE--SBT---TBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCE
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCC----eEEEEEe--ccc---CCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCe
Confidence 34555567777777888888853211 0000000 000 00000123455688999999 898888887 6999
Q ss_pred EEEEeCCCCeEEEEecc----------cCCCEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCeEEEEEec
Q 006229 579 AVLWCTESFTVKSTLEE----------HTQWITDVRFSPS-LSRLATSSADRTVRVWDTENVRKLTFICC 637 (655)
Q Consensus 579 VrIWDl~t~~~l~tl~g----------H~~~ItsVafsPd-g~~LaSgS~DgtVrVWDl~tg~~v~~l~~ 637 (655)
|++|| .+++.+..+.. +-.....|+|+|+ +.++++.+.+++|++||..+++.+..+..
T Consensus 168 I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~ 236 (329)
T 3fvz_A 168 IVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKH 236 (329)
T ss_dssp EEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECC
T ss_pred EEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEec
Confidence 99999 56777777743 3344899999998 77788888899999999998998888753
No 178
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.31 E-value=2.1e-06 Score=90.96 Aligned_cols=103 Identities=12% Similarity=0.150 Sum_probs=78.8
Q ss_pred CCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeC----------CCcEEEEe
Q 006229 514 LDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGH----------DKKAVLWC 583 (655)
Q Consensus 514 ~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~----------DgtVrIWD 583 (655)
.|++|.+|+..++ +.+..+..+..+ .++|+|||++|++++. |++|.+||
T Consensus 29 ~d~~v~v~D~~t~-------------------~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d 87 (361)
T 2oiz_A 29 TESRVHVYDYTNG-------------------KFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWD 87 (361)
T ss_dssp GGCEEEEEETTTC-------------------CEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEE
T ss_pred ccCeEEEEECCCC-------------------eEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEE
Confidence 4678888864433 233444444444 8999999999999873 67899999
Q ss_pred CCCCeEEEEeccc------CCCEEEEEEcCCCCEEEEEeC--CCcEEEEECCCCeEEEE-Eec
Q 006229 584 TESFTVKSTLEEH------TQWITDVRFSPSLSRLATSSA--DRTVRVWDTENVRKLTF-ICC 637 (655)
Q Consensus 584 l~t~~~l~tl~gH------~~~ItsVafsPdg~~LaSgS~--DgtVrVWDl~tg~~v~~-l~~ 637 (655)
+.+++.+.++..+ ......++|+|+|++|+++.. +++|.|||+.+++.+.. +..
T Consensus 88 ~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~ 150 (361)
T 2oiz_A 88 ADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA 150 (361)
T ss_dssp TTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG
T ss_pred CcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC
Confidence 9999988887632 345678999999999998874 68999999999988877 443
No 179
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.29 E-value=3.1e-05 Score=78.24 Aligned_cols=86 Identities=15% Similarity=0.134 Sum_probs=67.4
Q ss_pred ecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCC-CCeE---EEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 006229 551 IPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTE-SFTV---KSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDT 626 (655)
Q Consensus 551 l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~-t~~~---l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl 626 (655)
+..+...+..++|+|||++|++.+.++.|++||+. +++. ...+..+...+.+|+++++|+++++. ++.|.+||.
T Consensus 167 ~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~ 244 (296)
T 3e5z_A 167 PIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTP 244 (296)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECT
T ss_pred eecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECC
Confidence 34555667899999999988888888999999997 5554 34444466678899999999977766 889999998
Q ss_pred CCCeEEEEEeccc
Q 006229 627 ENVRKLTFICCYK 639 (655)
Q Consensus 627 ~tg~~v~~l~~~~ 639 (655)
. ++.+..+..+.
T Consensus 245 ~-g~~~~~~~~~~ 256 (296)
T 3e5z_A 245 D-GDELGRVLTPQ 256 (296)
T ss_dssp T-SCEEEEEECSS
T ss_pred C-CCEEEEEECCC
Confidence 7 77777776554
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.27 E-value=4.5e-05 Score=77.98 Aligned_cols=108 Identities=10% Similarity=0.001 Sum_probs=74.2
Q ss_pred CcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCC----CcEEE
Q 006229 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHD----KKAVL 581 (655)
Q Consensus 506 ~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~D----gtVrI 581 (655)
+++++++..++.|.+|+...+ ........+...|.+++|+++|++++++..+ +.|.+
T Consensus 56 g~l~~~~~~~~~i~~~d~~~~-------------------~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~ 116 (333)
T 2dg1_A 56 GQLFLLDVFEGNIFKINPETK-------------------EIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA 116 (333)
T ss_dssp SCEEEEETTTCEEEEECTTTC-------------------CEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred CCEEEEECCCCEEEEEeCCCC-------------------cEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEE
Confidence 345566667788888844332 1111112355679999999999988887776 78999
Q ss_pred EeCCCCeEEEEec--ccCCCEEEEEEcCCCCEEEEEeC------CCcEEEEECCCCeEE
Q 006229 582 WCTESFTVKSTLE--EHTQWITDVRFSPSLSRLATSSA------DRTVRVWDTENVRKL 632 (655)
Q Consensus 582 WDl~t~~~l~tl~--gH~~~ItsVafsPdg~~LaSgS~------DgtVrVWDl~tg~~v 632 (655)
||.++++....+. .+...+++++|+|+|+++++... ++.|.+||..+++..
T Consensus 117 ~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~ 175 (333)
T 2dg1_A 117 ATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT 175 (333)
T ss_dssp ECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE
T ss_pred EeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE
Confidence 9998877654443 34567999999999998887764 245666666655443
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.27 E-value=5.4e-06 Score=95.29 Aligned_cols=71 Identities=10% Similarity=0.117 Sum_probs=58.4
Q ss_pred eeEEEEcCCCCEEEEEeCCCc----------------EEEEeCCCCe----EEEEecccCCCEEEEEEcCCCCEEEEEeC
Q 006229 558 VESCHFSPDGKLLATGGHDKK----------------AVLWCTESFT----VKSTLEEHTQWITDVRFSPSLSRLATSSA 617 (655)
Q Consensus 558 V~sl~fSpdG~lLaSgs~Dgt----------------VrIWDl~t~~----~l~tl~gH~~~ItsVafsPdg~~LaSgS~ 617 (655)
+.+++|+|||+.|+.++.|+. |++|++.++. ++.....|...+.++.|+|||++|+.++.
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 678999999999999988876 9999998875 33333346677899999999999888775
Q ss_pred -----CCcEEEEECCC
Q 006229 618 -----DRTVRVWDTEN 628 (655)
Q Consensus 618 -----DgtVrVWDl~t 628 (655)
+..|++||+.+
T Consensus 253 ~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 253 EGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp CSSSSCCEEEEEEGGG
T ss_pred ccCCCccEEEEEECcc
Confidence 56899999986
No 182
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.22 E-value=8.6e-06 Score=93.48 Aligned_cols=101 Identities=9% Similarity=-0.051 Sum_probs=72.4
Q ss_pred eccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCc------------
Q 006229 511 DGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKK------------ 578 (655)
Q Consensus 511 sGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~Dgt------------ 578 (655)
.|+.+.+|++|+..++... . ...+.. ....+++|+|||+.|+.++.|..
T Consensus 142 ~G~~~~~i~v~dl~tg~~~-----~------------~~~~~~--~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~ 202 (695)
T 2bkl_A 142 NAADEAVLHVIDVDSGEWS-----K------------VDVIEG--GKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYT 202 (695)
T ss_dssp TTCSCCEEEEEETTTCCBC-----S------------SCCBSC--CTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGC
T ss_pred CCCceEEEEEEECCCCCCc-----C------------CcccCc--ccccceEEecCCCEEEEEEecCCCCCccccCCCCC
Confidence 5666788999977655210 0 001111 11257999999999999999887
Q ss_pred -EEEEeCCCCe----EEEEecccCCCEEEEEEcCCCCEEEEEeCCC----cEEEEECCCCe
Q 006229 579 -AVLWCTESFT----VKSTLEEHTQWITDVRFSPSLSRLATSSADR----TVRVWDTENVR 630 (655)
Q Consensus 579 -VrIWDl~t~~----~l~tl~gH~~~ItsVafsPdg~~LaSgS~Dg----tVrVWDl~tg~ 630 (655)
|++|++.++. ++....+|...+.++.|+|||++|+.++.++ .|++||..++.
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~ 263 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD 263 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS
T ss_pred EEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc
Confidence 9999998775 4444455777899999999999998888766 67777765554
No 183
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.14 E-value=3.9e-05 Score=86.94 Aligned_cols=111 Identities=11% Similarity=-0.025 Sum_probs=86.8
Q ss_pred cEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCC-
Q 006229 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTE- 585 (655)
Q Consensus 507 ~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~- 585 (655)
.++++...+++|.+|+..+. +.+.++... ..+.++.|+|||++|++++.|+.|.+||+.
T Consensus 168 ~~~V~~~~~~~V~viD~~t~-------------------~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~ 227 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTY-------------------EIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWM 227 (567)
T ss_dssp EEEEEETTTTEEEEEETTTC-------------------CEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTS
T ss_pred eEEEEeCCCCeEEEEECCCC-------------------eEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCC
Confidence 45667778889999965444 334444322 346689999999999999999999999996
Q ss_pred -CCeEEEEecccCCCEEEEEEc----CCCCEEEEEeC-CCcEEEEECCCCeEEEEEecc
Q 006229 586 -SFTVKSTLEEHTQWITDVRFS----PSLSRLATSSA-DRTVRVWDTENVRKLTFICCY 638 (655)
Q Consensus 586 -t~~~l~tl~gH~~~ItsVafs----Pdg~~LaSgS~-DgtVrVWDl~tg~~v~~l~~~ 638 (655)
+++.+.++.... ....++|+ |||+++++++. +++|.|||..+.+.+.++...
T Consensus 228 ~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~ 285 (567)
T 1qks_A 228 KEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTR 285 (567)
T ss_dssp SSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECC
T ss_pred CCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecc
Confidence 888888886433 46789999 79999888775 689999999999998887643
No 184
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.09 E-value=5.3e-05 Score=77.40 Aligned_cols=108 Identities=12% Similarity=0.017 Sum_probs=86.8
Q ss_pred CcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCC-CCeeEEEEcCCCCEEEEEeCCCcEEEEeC
Q 006229 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAST-SKVESCHFSPDGKLLATGGHDKKAVLWCT 584 (655)
Q Consensus 506 ~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~-~~V~sl~fSpdG~lLaSgs~DgtVrIWDl 584 (655)
+.+|++++.|+.|.+|+..++ +.+..+..+. ..+.++.++|+|++|+ +.++.|.+||.
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG-------------------~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~ 63 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTK-------------------EIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR 63 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTT-------------------EEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT
T ss_pred CcEEEeeCCCCEEEEEECCCC-------------------eEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC
Confidence 378899999999999976555 3445555554 4688999999999988 45788999999
Q ss_pred CCCeEEEEecccC-CCEEEEEEcCCCCEEEEEeC-CCcEEEEECCCCeEEEEEe
Q 006229 585 ESFTVKSTLEEHT-QWITDVRFSPSLSRLATSSA-DRTVRVWDTENVRKLTFIC 636 (655)
Q Consensus 585 ~t~~~l~tl~gH~-~~ItsVafsPdg~~LaSgS~-DgtVrVWDl~tg~~v~~l~ 636 (655)
+++.+..+..+. ..+.++.+.++|++|++.+. +++|..+|. +|+.+..+.
T Consensus 64 -~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~ 115 (276)
T 3no2_A 64 -DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTE 115 (276)
T ss_dssp -TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEE
T ss_pred -CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEe
Confidence 899998888653 57899999999999999888 778888886 677776664
No 185
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.09 E-value=3.8e-05 Score=78.76 Aligned_cols=71 Identities=14% Similarity=0.133 Sum_probs=54.5
Q ss_pred eeEEEEcCCCCEEEEEeCC---------------------------CcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCC
Q 006229 558 VESCHFSPDGKLLATGGHD---------------------------KKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLS 610 (655)
Q Consensus 558 V~sl~fSpdG~lLaSgs~D---------------------------gtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~ 610 (655)
|.++.|+|||+.|+.++.+ ..|.+||+.+++.+..+.. . .+.+++|+|+|
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg- 182 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK- 182 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-
Confidence 8999999999988887743 5789999999887556655 4 88999999999
Q ss_pred EEEEEeCCC-------cEEEEECCCCeE
Q 006229 611 RLATSSADR-------TVRVWDTENVRK 631 (655)
Q Consensus 611 ~LaSgS~Dg-------tVrVWDl~tg~~ 631 (655)
++++++.+. ..+||.+.+++.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 210 (347)
T 2gop_A 183 IVVNVPHREIIPQYFKFWDIYIWEDGKE 210 (347)
T ss_dssp EEEEEECCCSSCCSSCCEEEEEEETTEE
T ss_pred EEEEEecccccccccccccEEEeCCCce
Confidence 888887653 445555545543
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.09 E-value=8.7e-05 Score=75.76 Aligned_cols=142 Identities=14% Similarity=0.052 Sum_probs=96.9
Q ss_pred ceeccCCCCceEEEEec-CCCCcccc--------cCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCc
Q 006229 473 TLQHNGASSKSLLMFGS-DGMGSLTS--------APNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGF 543 (655)
Q Consensus 473 ~~~~s~S~d~s~l~ws~-dg~~~las--------ss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~ 543 (655)
.++..++.+..+.+|+. +|+..... ....+.+.+++++ +.++.|..|+. ++
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G----------------- 65 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DG----------------- 65 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TS-----------------
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CC-----------------
Confidence 56777788888888988 55322111 1112334445555 23555666643 32
Q ss_pred eeeeEEeecCC-CCCeeEEEEcCCCCEEEEEeC-CCcEEEEeCCCCeEEEEec------ccCCCEEEEEEcCCCCEEEEE
Q 006229 544 TFTEFQLIPAS-TSKVESCHFSPDGKLLATGGH-DKKAVLWCTESFTVKSTLE------EHTQWITDVRFSPSLSRLATS 615 (655)
Q Consensus 544 t~~~v~~l~gH-~~~V~sl~fSpdG~lLaSgs~-DgtVrIWDl~t~~~l~tl~------gH~~~ItsVafsPdg~~LaSg 615 (655)
+.+..+..+ ...+.++.+.+||++|++.+. ++.|..+|. +++.+..+. ++......+++.++|.+|++.
T Consensus 66 --~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~ 142 (276)
T 3no2_A 66 --RELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL 142 (276)
T ss_dssp --CEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEE
T ss_pred --CEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEe
Confidence 233334433 246889999999999999887 777888885 677776664 233356677889999999999
Q ss_pred eCCCcEEEEECCCCeEEEEEecc
Q 006229 616 SADRTVRVWDTENVRKLTFICCY 638 (655)
Q Consensus 616 S~DgtVrVWDl~tg~~v~~l~~~ 638 (655)
+.+++|.+||.. |+.+..+...
T Consensus 143 ~~~~~v~~~d~~-G~~~w~~~~~ 164 (276)
T 3no2_A 143 FATSEVREIAPN-GQLLNSVKLS 164 (276)
T ss_dssp TTTTEEEEECTT-SCEEEEEECS
T ss_pred cCCCEEEEECCC-CCEEEEEECC
Confidence 999999999998 8888887654
No 187
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.09 E-value=2.3e-05 Score=79.12 Aligned_cols=84 Identities=8% Similarity=0.041 Sum_probs=70.6
Q ss_pred EeecCCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 006229 549 QLIPASTSKVESCHFSPDGK-LLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTE 627 (655)
Q Consensus 549 ~~l~gH~~~V~sl~fSpdG~-lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~ 627 (655)
..+..+.....+++|+|+|+ +++++..++.|.+||..++ ...+..+...+.+|+|+|+|+++++...++.|.+||..
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 33445556688999999998 8888889999999999887 66777788889999999999988888788999999998
Q ss_pred CCeEEEE
Q 006229 628 NVRKLTF 634 (655)
Q Consensus 628 tg~~v~~ 634 (655)
+++....
T Consensus 99 ~g~~~~~ 105 (296)
T 3e5z_A 99 GGEWESI 105 (296)
T ss_dssp TCCEEEE
T ss_pred CCcEEEE
Confidence 8876543
No 188
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.08 E-value=8e-06 Score=84.78 Aligned_cols=90 Identities=11% Similarity=0.030 Sum_probs=65.2
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEE-------------------EEEcCCCCEEEEE----
Q 006229 559 ESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITD-------------------VRFSPSLSRLATS---- 615 (655)
Q Consensus 559 ~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~Its-------------------VafsPdg~~LaSg---- 615 (655)
.++.|+|||++|+.++.++.|++||+.+++....+..+.....+ ++|+|++++++.+
T Consensus 84 ~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~ 163 (396)
T 3c5m_A 84 FGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYH 163 (396)
T ss_dssp TTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHH
T ss_pred ccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeecc
Confidence 34889999999999999999999999998877666655554433 4567888776654
Q ss_pred -eCCCcEEEEECCCCeEEEEEecccceeeeeceeeEEEec
Q 006229 616 -SADRTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAP 654 (655)
Q Consensus 616 -S~DgtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P 654 (655)
..+..|++||+.+++........ ..+..+.|+|
T Consensus 164 ~~~~~~l~~~d~~~g~~~~~~~~~------~~~~~~~~sp 197 (396)
T 3c5m_A 164 TNPTCRLIKVDIETGELEVIHQDT------AWLGHPIYRP 197 (396)
T ss_dssp TCCCEEEEEEETTTCCEEEEEEES------SCEEEEEEET
T ss_pred CCCcceEEEEECCCCcEEeeccCC------cccccceECC
Confidence 45678999999988765444221 2244566666
No 189
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.06 E-value=7.2e-06 Score=85.14 Aligned_cols=82 Identities=15% Similarity=0.036 Sum_probs=64.0
Q ss_pred eeEEEEcCCCCEEEEEeCC---CcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q 006229 558 VESCHFSPDGKLLATGGHD---KKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTF 634 (655)
Q Consensus 558 V~sl~fSpdG~lLaSgs~D---gtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~ 634 (655)
+.+++|||||++|+..+.+ ..|.+||+.+++......++...+..+.|+|||++|+.++.++.|++||+.+++....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 7889999999998877543 4688899999887654444443344588999999999999999999999998887665
Q ss_pred Eeccc
Q 006229 635 ICCYK 639 (655)
Q Consensus 635 l~~~~ 639 (655)
+..+.
T Consensus 118 ~~~~~ 122 (396)
T 3c5m_A 118 YTVDE 122 (396)
T ss_dssp EECCT
T ss_pred Eeccc
Confidence 55443
No 190
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.06 E-value=5.7e-06 Score=94.96 Aligned_cols=76 Identities=12% Similarity=0.033 Sum_probs=60.9
Q ss_pred CCCCCeeEEEEcCCCCEEE-----EEeCCCcEEEEeCCCCeEEEEecccCCCE--EEEEEcCCCCEEEEEeCCCc-----
Q 006229 553 ASTSKVESCHFSPDGKLLA-----TGGHDKKAVLWCTESFTVKSTLEEHTQWI--TDVRFSPSLSRLATSSADRT----- 620 (655)
Q Consensus 553 gH~~~V~sl~fSpdG~lLa-----Sgs~DgtVrIWDl~t~~~l~tl~gH~~~I--tsVafsPdg~~LaSgS~Dgt----- 620 (655)
+|...|.+++|||||++|| +|+.+.+|+|||+.+++.+. ..+...+ .+++|+|||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence 4555788999999999988 45556799999999988641 1232233 68999999999999999887
Q ss_pred --------EEEEECCCCe
Q 006229 621 --------VRVWDTENVR 630 (655)
Q Consensus 621 --------VrVWDl~tg~ 630 (655)
|++|++.++.
T Consensus 196 ~~~~~~~~v~~~~l~t~~ 213 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEP 213 (695)
T ss_dssp GGGGGGCEEEEEETTSCG
T ss_pred ccCCCCCEEEEEECCCCc
Confidence 9999998876
No 191
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.05 E-value=1.1e-05 Score=92.85 Aligned_cols=76 Identities=11% Similarity=0.055 Sum_probs=61.8
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCc--------
Q 006229 554 STSKVESCHFSPDGKLLATGGHDK-----KAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRT-------- 620 (655)
Q Consensus 554 H~~~V~sl~fSpdG~lLaSgs~Dg-----tVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~Dgt-------- 620 (655)
|+..+.+++|||||++||.++.++ +|+|||+.+++.+.....+. .+.+++|+|||+.|+.++.|+.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-ccceEEEEeCCCEEEEEEECCccccccccc
Confidence 444688999999999998876544 89999999998876433222 3778999999999999998876
Q ss_pred --------EEEEECCCCe
Q 006229 621 --------VRVWDTENVR 630 (655)
Q Consensus 621 --------VrVWDl~tg~ 630 (655)
|++|++.++.
T Consensus 202 ~~~~~~~~v~~~~l~t~~ 219 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQ 219 (710)
T ss_dssp CCCCCCCEEEEEETTSCG
T ss_pred cccCCCCEEEEEECCCCc
Confidence 9999998875
No 192
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.04 E-value=0.00013 Score=71.98 Aligned_cols=76 Identities=9% Similarity=-0.015 Sum_probs=62.3
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeE
Q 006229 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRK 631 (655)
Q Consensus 556 ~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~ 631 (655)
..+.+|+++++|+++++...++.|.+||..+.........+...+.+|+++++|.++++...++.|.+||..+...
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS 225 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc
Confidence 4578899999999888877889999999988766554444557799999999998888888899999999976543
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.93 E-value=0.00021 Score=70.33 Aligned_cols=77 Identities=13% Similarity=0.042 Sum_probs=61.0
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEE
Q 006229 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKL 632 (655)
Q Consensus 556 ~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v 632 (655)
..+.+++++++|+++++...++.|.+||..+.........+...+++|+++++|+++++...++.|.+||..+....
T Consensus 108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~ 184 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV 184 (270)
T ss_dssp SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE
T ss_pred CCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE
Confidence 46889999999998888888899999987665544333344457889999999998888878899999999876544
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.87 E-value=0.00049 Score=77.91 Aligned_cols=146 Identities=16% Similarity=0.084 Sum_probs=96.8
Q ss_pred eeccCCCCceEEEEecCCCCccc-------ccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceee
Q 006229 474 LQHNGASSKSLLMFGSDGMGSLT-------SAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFT 546 (655)
Q Consensus 474 ~~~s~S~d~s~l~ws~dg~~~la-------sss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~ 546 (655)
+..+...+..+.+++.+....+. .....+.+.++++.+++.|+.|.+|+.... +.+
T Consensus 169 ~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~-----------------t~~ 231 (567)
T 1qks_A 169 FSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMK-----------------EPT 231 (567)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSS-----------------SCC
T ss_pred EEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCC-----------------CCc
Confidence 44455566777777776532211 112245666678877888888888864311 112
Q ss_pred eEEeecCCCCCeeEEEEc----CCCCEEEEEeC-CCcEEEEeCCCCeEEEEecc----------cCC-------------
Q 006229 547 EFQLIPASTSKVESCHFS----PDGKLLATGGH-DKKAVLWCTESFTVKSTLEE----------HTQ------------- 598 (655)
Q Consensus 547 ~v~~l~gH~~~V~sl~fS----pdG~lLaSgs~-DgtVrIWDl~t~~~l~tl~g----------H~~------------- 598 (655)
.+..+... .....++|+ |||++++++++ +++|.|+|..+++.+.++.- |..
T Consensus 232 ~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~ 310 (567)
T 1qks_A 232 TVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRP 310 (567)
T ss_dssp EEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSS
T ss_pred EeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCC
Confidence 33444432 235689999 69998888775 48999999998887766531 111
Q ss_pred --------------------------------CEEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeEEEEEec
Q 006229 599 --------------------------------WITDVRFSPSLSRLATSS-ADRTVRVWDTENVRKLTFICC 637 (655)
Q Consensus 599 --------------------------------~ItsVafsPdg~~LaSgS-~DgtVrVWDl~tg~~v~~l~~ 637 (655)
...++.|+|++++|++++ .+.+|.+||+.+++.+..+..
T Consensus 311 ~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 311 EFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp EEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred EEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEec
Confidence 123568999999987766 578999999999988877755
No 195
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.81 E-value=0.00025 Score=71.37 Aligned_cols=80 Identities=14% Similarity=0.218 Sum_probs=65.0
Q ss_pred EeecCCC-CCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEE-EEeCCCcEEEEEC
Q 006229 549 QLIPAST-SKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLA-TSSADRTVRVWDT 626 (655)
Q Consensus 549 ~~l~gH~-~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~La-SgS~DgtVrVWDl 626 (655)
..+.++. ..+..++++++|+++++...++.|.+||.++++.+..+..+...+++++|+|++++|+ +...++.|.+||+
T Consensus 218 ~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 218 GHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp EECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred EECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 3344444 5678899999999988888889999999988887777777778899999999999554 5556789999998
Q ss_pred CC
Q 006229 627 EN 628 (655)
Q Consensus 627 ~t 628 (655)
..
T Consensus 298 ~~ 299 (314)
T 1pjx_A 298 QR 299 (314)
T ss_dssp SS
T ss_pred CC
Confidence 74
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.78 E-value=0.00011 Score=84.91 Aligned_cols=80 Identities=13% Similarity=-0.034 Sum_probs=59.3
Q ss_pred eeEEEEcCCCCEEEEEeCCCc--------------EEEEeCCCCe----EEEEecccCCCEEEEEEcCCCCEEEEEeCCC
Q 006229 558 VESCHFSPDGKLLATGGHDKK--------------AVLWCTESFT----VKSTLEEHTQWITDVRFSPSLSRLATSSADR 619 (655)
Q Consensus 558 V~sl~fSpdG~lLaSgs~Dgt--------------VrIWDl~t~~----~l~tl~gH~~~ItsVafsPdg~~LaSgS~Dg 619 (655)
+..++|+|| +.|+.++.|+. |++|++.++. ++.....|...+.++.|+|||++|+..+.++
T Consensus 211 ~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 289 (741)
T 1yr2_A 211 FSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEG 289 (741)
T ss_dssp SCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECT
T ss_pred eccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEcc
Confidence 457899999 98888887665 8999997764 3333334555689999999999988887654
Q ss_pred -----cEEEEECCCC--eEEEEEecc
Q 006229 620 -----TVRVWDTENV--RKLTFICCY 638 (655)
Q Consensus 620 -----tVrVWDl~tg--~~v~~l~~~ 638 (655)
.|++||+.++ .++..+..+
T Consensus 290 ~~~~~~l~~~d~~~~~~~~~~~l~~~ 315 (741)
T 1yr2_A 290 TDPVNTVHVARVTNGKIGPVTALIPD 315 (741)
T ss_dssp TCSCCEEEEEEEETTEECCCEEEECS
T ss_pred CCCcceEEEEECCCCCCcccEEecCC
Confidence 7999999877 324445443
No 197
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.77 E-value=0.00037 Score=70.06 Aligned_cols=94 Identities=12% Similarity=0.039 Sum_probs=68.1
Q ss_pred CCeeEEEEc----CCCCEEEE-EeCCCcEEEEeCC-CCe-----EEEEecccC-CCEEEEEEcCCCCEEEEEeCCCcEEE
Q 006229 556 SKVESCHFS----PDGKLLAT-GGHDKKAVLWCTE-SFT-----VKSTLEEHT-QWITDVRFSPSLSRLATSSADRTVRV 623 (655)
Q Consensus 556 ~~V~sl~fS----pdG~lLaS-gs~DgtVrIWDl~-t~~-----~l~tl~gH~-~~ItsVafsPdg~~LaSgS~DgtVrV 623 (655)
.....++|+ ++++.|+. ...++.|.+||++ +++ ....+.++. ..+..++++++|.++++...++.|.+
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~ 251 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEV 251 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEE
Confidence 346789999 99975544 4568899999986 454 333444554 67899999999999998888999999
Q ss_pred EECCCCeEEEEEecccceeeeeceeeEEEec
Q 006229 624 WDTENVRKLTFICCYKCIFVSTAIGSCFFAP 654 (655)
Q Consensus 624 WDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P 654 (655)
||..+++.+..+..+.. .+.+++|+|
T Consensus 252 ~d~~~g~~~~~~~~~~~-----~~~~i~~~~ 277 (314)
T 1pjx_A 252 FGPDGGQPKMRIRCPFE-----KPSNLHFKP 277 (314)
T ss_dssp ECTTCBSCSEEEECSSS-----CEEEEEECT
T ss_pred EcCCCCcEeEEEeCCCC-----CceeEEECC
Confidence 99987776666654422 234555554
No 198
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.77 E-value=0.00046 Score=70.23 Aligned_cols=93 Identities=13% Similarity=0.042 Sum_probs=69.9
Q ss_pred CCeeEEEEcCCCCEE-EEEeCCCcEEEEeC--CCCeE-----EEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 006229 556 SKVESCHFSPDGKLL-ATGGHDKKAVLWCT--ESFTV-----KSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTE 627 (655)
Q Consensus 556 ~~V~sl~fSpdG~lL-aSgs~DgtVrIWDl--~t~~~-----l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~ 627 (655)
.....++|+||++.| ++.+.++.|.+||+ .++.. +..+..+...+..++++++|++.++...++.|.+||..
T Consensus 149 ~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 149 DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPV 228 (297)
T ss_dssp SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTT
T ss_pred ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCC
Confidence 345789999999866 45566789999987 45543 23344455678899999999988888888899999999
Q ss_pred CCeEEEEEecccceeeeeceeeEEEe
Q 006229 628 NVRKLTFICCYKCIFVSTAIGSCFFA 653 (655)
Q Consensus 628 tg~~v~~l~~~~~~v~s~~Vss~~F~ 653 (655)
+++.+..+..+... +.+|+|.
T Consensus 229 tG~~~~~i~~p~~~-----~t~~~f~ 249 (297)
T 3g4e_A 229 TGKRLQTVKLPVDK-----TTSCCFG 249 (297)
T ss_dssp TCCEEEEEECSSSB-----EEEEEEE
T ss_pred CceEEEEEECCCCC-----ceEEEEe
Confidence 99998888765432 3456665
No 199
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.73 E-value=0.00039 Score=75.10 Aligned_cols=91 Identities=12% Similarity=0.057 Sum_probs=69.7
Q ss_pred eeEEeecCCCCCeeEEEEcCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEeccc-------CCCEEEEEEcCC
Q 006229 546 TEFQLIPASTSKVESCHFSPDGKLLATGG----------HDKKAVLWCTESFTVKSTLEEH-------TQWITDVRFSPS 608 (655)
Q Consensus 546 ~~v~~l~gH~~~V~sl~fSpdG~lLaSgs----------~DgtVrIWDl~t~~~l~tl~gH-------~~~ItsVafsPd 608 (655)
+.+.++..-..+ .+.++|||++|++++ .++.|.+||..+++.+.++.-. ...-..++|+||
T Consensus 70 ~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spD 147 (386)
T 3sjl_D 70 RVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPD 147 (386)
T ss_dssp EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTT
T ss_pred eEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCC
Confidence 444444433333 499999999887775 3678999999999998887421 124567899999
Q ss_pred CCEEEEEeC--CCcEEEEECCCCeEEEEEecc
Q 006229 609 LSRLATSSA--DRTVRVWDTENVRKLTFICCY 638 (655)
Q Consensus 609 g~~LaSgS~--DgtVrVWDl~tg~~v~~l~~~ 638 (655)
|++|+.+.. +++|.|+|+.+++.+.++...
T Consensus 148 Gk~lyVan~~~~~~VsVID~~t~~vv~tI~v~ 179 (386)
T 3sjl_D 148 GKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP 179 (386)
T ss_dssp SSEEEEEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred CCEEEEEEcCCCCeEEEEECCCCcEEEEEECC
Confidence 999988874 689999999999999888643
No 200
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.66 E-value=0.00092 Score=69.26 Aligned_cols=83 Identities=8% Similarity=-0.075 Sum_probs=63.5
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE--ecccCCCEEEEEEcC-CCCEEEEE----eCCCcEEEEECCC
Q 006229 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKST--LEEHTQWITDVRFSP-SLSRLATS----SADRTVRVWDTEN 628 (655)
Q Consensus 556 ~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~t--l~gH~~~ItsVafsP-dg~~LaSg----S~DgtVrVWDl~t 628 (655)
.....++|+||+++|+++.. +|.+||+.+++.... +..+......++++| ++..+++. ..+++|.+||..
T Consensus 225 ~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~- 301 (328)
T 3dsm_A 225 DWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ- 301 (328)
T ss_dssp CCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-
T ss_pred CCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-
Confidence 35789999999998888765 899999998875421 222246789999999 55666666 678899999998
Q ss_pred CeEEEEEecccce
Q 006229 629 VRKLTFICCYKCI 641 (655)
Q Consensus 629 g~~v~~l~~~~~~ 641 (655)
++.+..+..+..+
T Consensus 302 g~~~~~i~~G~~P 314 (328)
T 3dsm_A 302 GKLIDEFYVGIIP 314 (328)
T ss_dssp CCEEEEEEEEESE
T ss_pred CCEEEEEEeccCc
Confidence 8888888765443
No 201
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.64 E-value=0.00065 Score=70.42 Aligned_cols=110 Identities=11% Similarity=-0.052 Sum_probs=75.0
Q ss_pred cEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 006229 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES 586 (655)
Q Consensus 507 ~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t 586 (655)
++.++...++.|.+|+..++ +.+.++.. ......++|+++++++++...++.|.+||..+
T Consensus 55 ~lyv~~~~~~~v~viD~~t~-------------------~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t 114 (328)
T 3dsm_A 55 IGWIVVNNSHVIFAIDINTF-------------------KEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKT 114 (328)
T ss_dssp EEEEEEGGGTEEEEEETTTC-------------------CEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTT
T ss_pred EEEEEEcCCCEEEEEECccc-------------------EEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCC
Confidence 33344445667777754433 33444432 35678999999996666555899999999999
Q ss_pred CeEEEEecccC-----CCEEEEEEcCCCCEEEEEe--CCCcEEEEECCCCeEEEEEecc
Q 006229 587 FTVKSTLEEHT-----QWITDVRFSPSLSRLATSS--ADRTVRVWDTENVRKLTFICCY 638 (655)
Q Consensus 587 ~~~l~tl~gH~-----~~ItsVafsPdg~~LaSgS--~DgtVrVWDl~tg~~v~~l~~~ 638 (655)
++.+.++.... .....|++ ++..|+.+. .+++|.+||+.+++.+..+...
T Consensus 115 ~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g 171 (328)
T 3dsm_A 115 YEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG 171 (328)
T ss_dssp TEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS
T ss_pred CeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC
Confidence 99887775332 14566777 345555444 4899999999999988777643
No 202
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.59 E-value=0.0014 Score=66.88 Aligned_cols=123 Identities=7% Similarity=-0.054 Sum_probs=79.5
Q ss_pred eeccCCCCceEEEEecCCCCcccccCcccCCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecC
Q 006229 474 LQHNGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPA 553 (655)
Q Consensus 474 ~~~s~S~d~s~l~ws~dg~~~lasss~~l~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~g 553 (655)
.+..+..-....+|++++. .++.++..++.|..|.. ++ .+..+..
T Consensus 39 ~l~~~~~~~egp~~~~~g~--------------~l~~~d~~~~~i~~~~~-~g--------------------~~~~~~~ 83 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQR--------------TLVWSDLVGRRVLGWRE-DG--------------------TVDVLLD 83 (305)
T ss_dssp EEECCCSSEEEEEEEGGGT--------------EEEEEETTTTEEEEEET-TS--------------------CEEEEEE
T ss_pred EEecCCcCccCCeEeCCCC--------------EEEEEECCCCEEEEEeC-CC--------------------CEEEEeC
Confidence 3444444555667777655 45666667777877743 22 1122333
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEec---cc-CCCEEEEEEcCCCCEEEE----EeC--------
Q 006229 554 STSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLE---EH-TQWITDVRFSPSLSRLAT----SSA-------- 617 (655)
Q Consensus 554 H~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~---gH-~~~ItsVafsPdg~~LaS----gS~-------- 617 (655)
+...+..++|+++|+++++...++.|.+||.+ ++...... +. ...+++++++|+|++++| |..
T Consensus 84 ~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~ 162 (305)
T 3dr2_A 84 ATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPA 162 (305)
T ss_dssp SCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCC
T ss_pred CCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccccc
Confidence 45668899999999977776667899999986 55432222 11 235788999999999887 332
Q ss_pred -----CCcEEEEECCCCeEE
Q 006229 618 -----DRTVRVWDTENVRKL 632 (655)
Q Consensus 618 -----DgtVrVWDl~tg~~v 632 (655)
.+.|..||..+++..
T Consensus 163 ~~~~~~~~v~~~d~~~g~~~ 182 (305)
T 3dr2_A 163 DPELAHHSVYRLPPDGSPLQ 182 (305)
T ss_dssp CCSSSCEEEEEECSSSCCCE
T ss_pred ccccCCCeEEEEcCCCCcEE
Confidence 246778887666543
No 203
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.59 E-value=0.001 Score=70.93 Aligned_cols=77 Identities=9% Similarity=-0.032 Sum_probs=62.2
Q ss_pred EEEEcCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEeccc-------CCCEEEEEEcCCCCEEEEEeC--CCc
Q 006229 560 SCHFSPDGKLLATGG----------HDKKAVLWCTESFTVKSTLEEH-------TQWITDVRFSPSLSRLATSSA--DRT 620 (655)
Q Consensus 560 sl~fSpdG~lLaSgs----------~DgtVrIWDl~t~~~l~tl~gH-------~~~ItsVafsPdg~~LaSgS~--Dgt 620 (655)
.++|||||++|+.+. .+++|.+||..+++.+.++.-- ...-..++|+|||++|+.++. +..
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 899999999988886 3678999999998888776421 123458999999999998874 578
Q ss_pred EEEEECCCCeEEEE-Eec
Q 006229 621 VRVWDTENVRKLTF-ICC 637 (655)
Q Consensus 621 VrVWDl~tg~~v~~-l~~ 637 (655)
|.++| .+++.+.. +..
T Consensus 150 v~viD-~t~~~~~~~i~~ 166 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSS 166 (373)
T ss_pred EEEEE-CCCCEEeEEcCC
Confidence 99999 99988877 654
No 204
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.57 E-value=0.006 Score=60.19 Aligned_cols=78 Identities=8% Similarity=0.027 Sum_probs=61.9
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE-EecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEE
Q 006229 554 STSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKS-TLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKL 632 (655)
Q Consensus 554 H~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~-tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v 632 (655)
....+.+++++++|+++++...++.|.+||. +++... .+..+...+.+++++++|+.+++...++.|.+||. +++..
T Consensus 97 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 174 (299)
T 2z2n_A 97 PDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT 174 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred cCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE
Confidence 4457899999999998888888899999998 555443 23345667999999999988888877889999999 66554
Q ss_pred E
Q 006229 633 T 633 (655)
Q Consensus 633 ~ 633 (655)
.
T Consensus 175 ~ 175 (299)
T 2z2n_A 175 E 175 (299)
T ss_dssp E
T ss_pred E
Confidence 3
No 205
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.53 E-value=0.0021 Score=74.13 Aligned_cols=79 Identities=13% Similarity=0.033 Sum_probs=58.5
Q ss_pred eecCCCCCeeEEEEcCCCCEEEEEeCCC-----cEEEEeCCCC--eEEEEecccCCCEEEEEEcCCCCEEEEEeCC----
Q 006229 550 LIPASTSKVESCHFSPDGKLLATGGHDK-----KAVLWCTESF--TVKSTLEEHTQWITDVRFSPSLSRLATSSAD---- 618 (655)
Q Consensus 550 ~l~gH~~~V~sl~fSpdG~lLaSgs~Dg-----tVrIWDl~t~--~~l~tl~gH~~~ItsVafsPdg~~LaSgS~D---- 618 (655)
....+...+.++.|||||++|+..+.++ .|++||+.++ ++...+..+...+.... +|+|..|+..+.+
T Consensus 262 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~ 340 (741)
T 1yr2_A 262 ATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPL 340 (741)
T ss_dssp CCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTT
T ss_pred ccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCC
Confidence 3334444688999999999888877654 8999999887 32456666666666554 4899988888764
Q ss_pred CcEEEEECCCC
Q 006229 619 RTVRVWDTENV 629 (655)
Q Consensus 619 gtVrVWDl~tg 629 (655)
+.|.+||+.++
T Consensus 341 ~~l~~~d~~~~ 351 (741)
T 1yr2_A 341 KKIVRVDLSGS 351 (741)
T ss_dssp CEEEEEECSSS
T ss_pred CEEEEEeCCCC
Confidence 45999999875
No 206
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.53 E-value=0.0053 Score=60.61 Aligned_cols=77 Identities=8% Similarity=-0.094 Sum_probs=61.4
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE-ecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEE
Q 006229 554 STSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKST-LEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKL 632 (655)
Q Consensus 554 H~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~t-l~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v 632 (655)
+...+.+++++++|+++++...++.|.+||. +++.... +..+...+.+++++++|.++++...++.|.+||. +++..
T Consensus 139 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 216 (299)
T 2z2n_A 139 KGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT 216 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred CCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE
Confidence 4456899999999998888777889999999 6665543 3445567899999999998887777889999999 66543
No 207
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.52 E-value=0.0024 Score=66.07 Aligned_cols=92 Identities=13% Similarity=-0.052 Sum_probs=66.3
Q ss_pred CCeeEEEEcCCCCEEEEE-eCCCcEEEEeCC--CC-e-----EEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 006229 556 SKVESCHFSPDGKLLATG-GHDKKAVLWCTE--SF-T-----VKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDT 626 (655)
Q Consensus 556 ~~V~sl~fSpdG~lLaSg-s~DgtVrIWDl~--t~-~-----~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl 626 (655)
.....++|++||+.|+.+ +.++.|.+||++ ++ . .+..+.++...+..++++++|.+.++...++.|.+||.
T Consensus 179 ~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 179 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred cccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence 346789999999866554 557899999986 55 3 23344445567889999999998888777889999998
Q ss_pred CCCeEEEEEecccceeeeeceeeEEEe
Q 006229 627 ENVRKLTFICCYKCIFVSTAIGSCFFA 653 (655)
Q Consensus 627 ~tg~~v~~l~~~~~~v~s~~Vss~~F~ 653 (655)
+++.+..+..+.. .+.+++|.
T Consensus 259 -~g~~~~~i~~~~~-----~~~~~af~ 279 (326)
T 2ghs_A 259 -DGNHIARYEVPGK-----QTTCPAFI 279 (326)
T ss_dssp -TCCEEEEEECSCS-----BEEEEEEE
T ss_pred -CCCEEEEEECCCC-----CcEEEEEe
Confidence 5777776665432 24455665
No 208
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.49 E-value=0.00015 Score=76.94 Aligned_cols=77 Identities=16% Similarity=0.066 Sum_probs=50.2
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCC---CEEEEEeCCCcEEEEECCCCeEEEEEec
Q 006229 561 CHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSL---SRLATSSADRTVRVWDTENVRKLTFICC 637 (655)
Q Consensus 561 l~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg---~~LaSgS~DgtVrVWDl~tg~~v~~l~~ 637 (655)
+.++|++..|++++.|+.|+.||.++++.+-.+..+. .....++.+. ..++.++.|+.|+.||.++|+.+-.+..
T Consensus 124 ~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 201 (369)
T 2hz6_A 124 DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY 201 (369)
T ss_dssp ---------EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC
T ss_pred ccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC
Confidence 4456788899999999999999999998765554221 2233334432 5677889999999999999998876654
Q ss_pred cc
Q 006229 638 YK 639 (655)
Q Consensus 638 ~~ 639 (655)
..
T Consensus 202 ~~ 203 (369)
T 2hz6_A 202 AS 203 (369)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 209
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.40 E-value=1.6e-05 Score=84.52 Aligned_cols=109 Identities=10% Similarity=-0.051 Sum_probs=54.7
Q ss_pred CcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 006229 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTE 585 (655)
Q Consensus 506 ~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~ 585 (655)
+..|++++.|+.|..|+..+++ .+-.+.. +.|.+..+..+++++++++.|+.|+.||..
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~-------------------~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~ 67 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGS-------------------IKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSK 67 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCC-------------------EEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC---
T ss_pred CCEEEEEcCCCEEEEEECCCCC-------------------EEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECC
Confidence 3678888899999999776662 2222222 345555566778888888999999999999
Q ss_pred CCeEEEEecccCCC-EE-EEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEe
Q 006229 586 SFTVKSTLEEHTQW-IT-DVRFSPSLSRLATSSADRTVRVWDTENVRKLTFIC 636 (655)
Q Consensus 586 t~~~l~tl~gH~~~-It-sVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~ 636 (655)
+++.+..+..+... +. +.++. ++..|++++.|+.|+.||+++|+.+..+.
T Consensus 68 tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~ 119 (369)
T 2hz6_A 68 NNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLS 119 (369)
T ss_dssp --CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC---------
T ss_pred CCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEec
Confidence 88876665433211 10 00111 24456666777777777777776655443
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.37 E-value=0.0015 Score=66.36 Aligned_cols=68 Identities=12% Similarity=0.072 Sum_probs=55.1
Q ss_pred eecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEc-CCCCEEEEEeC
Q 006229 550 LIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFS-PSLSRLATSSA 617 (655)
Q Consensus 550 ~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafs-Pdg~~LaSgS~ 617 (655)
.+..+...+..++++++|++.++...++.|.+||.++++.+..+..+...+++|+|. |+++.|+.++.
T Consensus 193 ~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 193 KLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp ECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred ECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 333344567889999999988888888899999999999999998888889999998 88876655443
No 211
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.30 E-value=0.01 Score=61.28 Aligned_cols=59 Identities=17% Similarity=-0.011 Sum_probs=43.7
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecc---c-CCCEEEEEEcCCCCEEEEEe
Q 006229 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEE---H-TQWITDVRFSPSLSRLATSS 616 (655)
Q Consensus 556 ~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~g---H-~~~ItsVafsPdg~~LaSgS 616 (655)
..|.+++|+++|+++++. . ..|.+||..+++....... + ...+++++++|+|+++++..
T Consensus 90 ~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~ 152 (326)
T 2ghs_A 90 FMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTM 152 (326)
T ss_dssp SCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEE
T ss_pred CcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeC
Confidence 568999999999877764 3 4499999988876433221 1 24689999999999877654
No 212
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.30 E-value=0.0025 Score=69.68 Aligned_cols=91 Identities=12% Similarity=0.036 Sum_probs=69.9
Q ss_pred eeEEeecCCCCCeeEEEEcCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEec-c------cCCCEEEEEEcCC
Q 006229 546 TEFQLIPASTSKVESCHFSPDGKLLATGG----------HDKKAVLWCTESFTVKSTLE-E------HTQWITDVRFSPS 608 (655)
Q Consensus 546 ~~v~~l~gH~~~V~sl~fSpdG~lLaSgs----------~DgtVrIWDl~t~~~l~tl~-g------H~~~ItsVafsPd 608 (655)
+.+.++..-..+ .+.|+|||++|+++. .++.|.++|..+++.+.++. + +...-..++|+||
T Consensus 110 ~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spD 187 (426)
T 3c75_H 110 RILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPD 187 (426)
T ss_dssp EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTT
T ss_pred EEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCC
Confidence 444444433334 799999999888876 46789999999999988774 2 1233457899999
Q ss_pred CCEEEEEeC--CCcEEEEECCCCeEEEEEecc
Q 006229 609 LSRLATSSA--DRTVRVWDTENVRKLTFICCY 638 (655)
Q Consensus 609 g~~LaSgS~--DgtVrVWDl~tg~~v~~l~~~ 638 (655)
|++|+.+.. +++|.|.|+.+++.+..+...
T Consensus 188 Gk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~ 219 (426)
T 3c75_H 188 NKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP 219 (426)
T ss_dssp SSEEEEEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred CCEEEEEecCCCCeEEEEECCCCeEEEEEEcC
Confidence 999999875 578999999999998888754
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.29 E-value=0.0028 Score=68.24 Aligned_cols=71 Identities=8% Similarity=0.070 Sum_probs=55.1
Q ss_pred EEEcCCCCEEEEEeCCC--cEEEEeCCCCeEEEEe----cccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeE
Q 006229 561 CHFSPDGKLLATGGHDK--KAVLWCTESFTVKSTL----EEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRK 631 (655)
Q Consensus 561 l~fSpdG~lLaSgs~Dg--tVrIWDl~t~~~l~tl----~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~ 631 (655)
++|++++++|+++..++ .|.+||..++.....+ ..+...+++++++|++..|+.+..++.|++||..++..
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~ 252 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV 252 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE
Confidence 99999999999988866 7888888766544444 22556789999999555555577788999999987764
No 214
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.26 E-value=0.0014 Score=75.36 Aligned_cols=79 Identities=10% Similarity=-0.043 Sum_probs=57.1
Q ss_pred eEEEEcCCCCEEEEEeCCCc-------------EEEEeCCCCe----EEEEecc-cCCCEEEEEEcCCCCEEEEEeC---
Q 006229 559 ESCHFSPDGKLLATGGHDKK-------------AVLWCTESFT----VKSTLEE-HTQWITDVRFSPSLSRLATSSA--- 617 (655)
Q Consensus 559 ~sl~fSpdG~lLaSgs~Dgt-------------VrIWDl~t~~----~l~tl~g-H~~~ItsVafsPdg~~LaSgS~--- 617 (655)
..++|+ ||+.|+.++.|.. |++|++.+.. ++..... |...+.++.|+|||++|+..+.
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 568899 9999999888854 9999997653 3434444 6667889999999998754432
Q ss_pred -CCcEEEEECCCCe-EEEEEecc
Q 006229 618 -DRTVRVWDTENVR-KLTFICCY 638 (655)
Q Consensus 618 -DgtVrVWDl~tg~-~v~~l~~~ 638 (655)
+..|++||+.++. .+..+..+
T Consensus 257 ~~~~i~~~d~~~~~~~~~~l~~~ 279 (693)
T 3iuj_A 257 SGNRLYVKDLSQENAPLLTVQGD 279 (693)
T ss_dssp SCCEEEEEETTSTTCCCEEEECS
T ss_pred CCcEEEEEECCCCCCceEEEeCC
Confidence 3479999998763 34444433
No 215
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.21 E-value=0.031 Score=55.00 Aligned_cols=77 Identities=8% Similarity=-0.009 Sum_probs=60.5
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE-EecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEE
Q 006229 554 STSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKS-TLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKL 632 (655)
Q Consensus 554 H~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~-tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v 632 (655)
....+.+++++++|+++++...++.|..||.. ++... .+......+++++++++++++++...++.|.+||. +++..
T Consensus 102 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~ 179 (300)
T 2qc5_A 102 PDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLE 179 (300)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred CCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEE
Confidence 34668999999999988888778899999988 65543 23445567999999999997777777889999998 55544
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.14 E-value=0.00045 Score=79.43 Aligned_cols=75 Identities=23% Similarity=0.248 Sum_probs=56.8
Q ss_pred CCCCCeeEEEEcCCCCEEEE-----EeCCCcEEEEeCCCCeEEEE-ecccCCCEEEEEEcCCCCEEEEEeCCCc------
Q 006229 553 ASTSKVESCHFSPDGKLLAT-----GGHDKKAVLWCTESFTVKST-LEEHTQWITDVRFSPSLSRLATSSADRT------ 620 (655)
Q Consensus 553 gH~~~V~sl~fSpdG~lLaS-----gs~DgtVrIWDl~t~~~l~t-l~gH~~~ItsVafsPdg~~LaSgS~Dgt------ 620 (655)
+|...|..++|||||++||- |+.+.+|+|||+.+++.+.. +.+ ....+++|+ |++.|+.++.|..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCccccccc
Confidence 35557889999999998884 33446899999999986543 221 113678999 9999999998854
Q ss_pred -------EEEEECCCCe
Q 006229 621 -------VRVWDTENVR 630 (655)
Q Consensus 621 -------VrVWDl~tg~ 630 (655)
|++|++.++.
T Consensus 203 ~~~~~~~v~~~~lgt~~ 219 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQ 219 (693)
T ss_dssp --CCCCEEEEEETTSCG
T ss_pred ccCCCcEEEEEECCCCc
Confidence 9999998764
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.09 E-value=0.0039 Score=63.38 Aligned_cols=76 Identities=11% Similarity=0.080 Sum_probs=59.9
Q ss_pred cCCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCe
Q 006229 552 PASTSKVESCHFSPDGK-LLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVR 630 (655)
Q Consensus 552 ~gH~~~V~sl~fSpdG~-lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~ 630 (655)
...........|+++|+ +++++..++.|..|+. +++ +..+..+...+..++|+++|+++++...++.|.+||.. ++
T Consensus 41 ~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~ 117 (305)
T 3dr2_A 41 YDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ 117 (305)
T ss_dssp ECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred ecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC
Confidence 33445567899999998 7778888899999998 454 34566677889999999999977766667899999986 54
No 218
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.07 E-value=0.016 Score=62.33 Aligned_cols=76 Identities=8% Similarity=-0.054 Sum_probs=53.7
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE----ecccCCCE--EEEEEcCC-CCEEEEEeCCCcEEEEEC
Q 006229 554 STSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKST----LEEHTQWI--TDVRFSPS-LSRLATSSADRTVRVWDT 626 (655)
Q Consensus 554 H~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~t----l~gH~~~I--tsVafsPd-g~~LaSgS~DgtVrVWDl 626 (655)
....+.+++|+|++..|+.+..++.|+.||..++..... ..++...- ..|+|+|+ +.++++-+.+++|++||.
T Consensus 217 ~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~ 296 (409)
T 3hrp_A 217 FSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITP 296 (409)
T ss_dssp SCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred hcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEec
Confidence 445678999999544455577788999999987764332 23333333 39999995 666777777899999998
Q ss_pred CCC
Q 006229 627 ENV 629 (655)
Q Consensus 627 ~tg 629 (655)
...
T Consensus 297 ~g~ 299 (409)
T 3hrp_A 297 DGE 299 (409)
T ss_dssp TCC
T ss_pred CCC
Confidence 743
No 219
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.02 E-value=0.0031 Score=65.59 Aligned_cols=85 Identities=9% Similarity=0.039 Sum_probs=65.0
Q ss_pred CCCCCeeEEEEcCCCCEEEEEeC-----CCcEEEEeCCCCeEEEEecc------cCCCEEEEEEcCCCC-EEEEEe---C
Q 006229 553 ASTSKVESCHFSPDGKLLATGGH-----DKKAVLWCTESFTVKSTLEE------HTQWITDVRFSPSLS-RLATSS---A 617 (655)
Q Consensus 553 gH~~~V~sl~fSpdG~lLaSgs~-----DgtVrIWDl~t~~~l~tl~g------H~~~ItsVafsPdg~-~LaSgS---~ 617 (655)
+|...+.+|+|+++|+++++-.. +..|.+||+.+++.+.++.- +...+.+|++++++. .+++-+ .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 45567999999999987776543 68899999999987776643 234578999998654 456655 6
Q ss_pred CCcEEEEECCCCeEEEEEec
Q 006229 618 DRTVRVWDTENVRKLTFICC 637 (655)
Q Consensus 618 DgtVrVWDl~tg~~v~~l~~ 637 (655)
++.|.+||+.+++..+.+..
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~ 163 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQG 163 (343)
T ss_dssp GCEEEEEETTTCCEEEECTT
T ss_pred CCeEEEEECCCCCEEEEecC
Confidence 88999999998887776643
No 220
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.97 E-value=0.031 Score=55.05 Aligned_cols=77 Identities=10% Similarity=-0.070 Sum_probs=60.6
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE-EecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEE
Q 006229 554 STSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKS-TLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKL 632 (655)
Q Consensus 554 H~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~-tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v 632 (655)
+...+.+++++++|+++++...++.|.+||.. ++... .+......+.++++++++.++++...++.|.+||.. ++..
T Consensus 60 ~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~ 137 (300)
T 2qc5_A 60 PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY 137 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE
T ss_pred CCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE
Confidence 34568899999999988887778899999988 55432 233345679999999999988888778899999987 5544
No 221
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.96 E-value=0.0051 Score=70.87 Aligned_cols=62 Identities=11% Similarity=0.052 Sum_probs=51.8
Q ss_pred CcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEeccc
Q 006229 577 KKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYK 639 (655)
Q Consensus 577 gtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~ 639 (655)
+.|+.||+.+++.+-.+. +...+....+..++.+++.++.|+.|++||+++++.+..+....
T Consensus 457 g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp EEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCC
Confidence 789999999999887775 44445556677788899999999999999999999999887654
No 222
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.95 E-value=0.0024 Score=68.40 Aligned_cols=81 Identities=7% Similarity=-0.060 Sum_probs=62.9
Q ss_pred eeEEeecCCCCCeeEEEEcCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEeccc-------CCCEEEEEEcCC
Q 006229 546 TEFQLIPASTSKVESCHFSPDGKLLATGG----------HDKKAVLWCTESFTVKSTLEEH-------TQWITDVRFSPS 608 (655)
Q Consensus 546 ~~v~~l~gH~~~V~sl~fSpdG~lLaSgs----------~DgtVrIWDl~t~~~l~tl~gH-------~~~ItsVafsPd 608 (655)
+.+.++..-..+ .+.|+|||++|+++. .+++|.+||+.+++.+.++.-+ ...-..++|+||
T Consensus 57 ~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpD 134 (368)
T 1mda_H 57 VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCAS 134 (368)
T ss_dssp EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTT
T ss_pred eEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCC
Confidence 455555433445 799999999888886 3789999999999999998633 123567899999
Q ss_pred CCEEEEEeC--CCcEEE--EECCC
Q 006229 609 LSRLATSSA--DRTVRV--WDTEN 628 (655)
Q Consensus 609 g~~LaSgS~--DgtVrV--WDl~t 628 (655)
|++|+.+.. +..|.| ||+.+
T Consensus 135 Gk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 135 SACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp SSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCEEEEEccCCCCeEEEEEEchhh
Confidence 999999875 457888 99976
No 223
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.87 E-value=0.0067 Score=64.58 Aligned_cols=77 Identities=6% Similarity=-0.044 Sum_probs=64.0
Q ss_pred eeEEEEcCCCCEEEEEeC----------CCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCC-EEEEEe-CCCcEEEEE
Q 006229 558 VESCHFSPDGKLLATGGH----------DKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLS-RLATSS-ADRTVRVWD 625 (655)
Q Consensus 558 V~sl~fSpdG~lLaSgs~----------DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~-~LaSgS-~DgtVrVWD 625 (655)
...+.|++|++.|+.+.. ++.|.++|+.+++.+.++. ......++.|+|||+ +++++. .+++|.|||
T Consensus 269 ~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD 347 (373)
T 2mad_H 269 WQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYD 347 (373)
T ss_pred eEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEE
Confidence 445789999998777654 3579999999999998885 334689999999999 788877 589999999
Q ss_pred CCCCeEEEEE
Q 006229 626 TENVRKLTFI 635 (655)
Q Consensus 626 l~tg~~v~~l 635 (655)
+.+++.+..+
T Consensus 348 ~~t~~vv~~i 357 (373)
T 2mad_H 348 AGAGDQDQST 357 (373)
T ss_pred CCCCCEEeee
Confidence 9999999874
No 224
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=96.86 E-value=0.0044 Score=64.42 Aligned_cols=88 Identities=10% Similarity=0.027 Sum_probs=63.4
Q ss_pred eeEEeecCCCCCeeEEEEcCCCCEEEEEe--CCCcEEEEeCCCCeEEEEe-------cccCCCEEEEEEcCCCCEEEEEe
Q 006229 546 TEFQLIPASTSKVESCHFSPDGKLLATGG--HDKKAVLWCTESFTVKSTL-------EEHTQWITDVRFSPSLSRLATSS 616 (655)
Q Consensus 546 ~~v~~l~gH~~~V~sl~fSpdG~lLaSgs--~DgtVrIWDl~t~~~l~tl-------~gH~~~ItsVafsPdg~~LaSgS 616 (655)
+.+..+. ..+..|+++++|+++++.. .++.++||.+.+++.. .+ .+|...+.+|+|+++++++++-+
T Consensus 10 ~~v~~~~---~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~ 85 (343)
T 2qe8_A 10 EVVAELS---LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDN 85 (343)
T ss_dssp EEEEEES---SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEEC
T ss_pred EEEEEcC---CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcC
Confidence 4444443 5788999999999998864 2343666766566543 22 23567899999999988766654
Q ss_pred C-----CCcEEEEECCCCeEEEEEec
Q 006229 617 A-----DRTVRVWDTENVRKLTFICC 637 (655)
Q Consensus 617 ~-----DgtVrVWDl~tg~~v~~l~~ 637 (655)
. +..|.+||+.+++.+..+..
T Consensus 86 g~~~~~~~~i~~~d~~tg~~~~~~~~ 111 (343)
T 2qe8_A 86 GNQSKSVPKLVAWDTLNNQLSRVIYL 111 (343)
T ss_dssp HHHHTSCCEEEEEETTTTEEEEEEEC
T ss_pred CCCcCCCCeEEEEECCCCeEEEEEEC
Confidence 4 67899999999987777754
No 225
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.70 E-value=0.013 Score=67.65 Aligned_cols=63 Identities=16% Similarity=0.046 Sum_probs=51.3
Q ss_pred CCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEeccc
Q 006229 576 DKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYK 639 (655)
Q Consensus 576 DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~ 639 (655)
+++|+.||+.+++.+-.+..+.. +....+...+.+|+.|+.|+.|+.||.++|+.+-.+....
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~-~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~ 516 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTI-FNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAAS 516 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSS-CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred ceeEEEEECCCCCeEeEccCCCC-ccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCC
Confidence 37799999999999887765543 3344566678899999999999999999999998887653
No 226
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.68 E-value=0.0053 Score=65.70 Aligned_cols=80 Identities=4% Similarity=-0.110 Sum_probs=64.4
Q ss_pred EEEEcCCCCEEEEEeC---------CCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCC-EEEEEe-CCCcEEEEECCC
Q 006229 560 SCHFSPDGKLLATGGH---------DKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLS-RLATSS-ADRTVRVWDTEN 628 (655)
Q Consensus 560 sl~fSpdG~lLaSgs~---------DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~-~LaSgS-~DgtVrVWDl~t 628 (655)
.+.|++|++.|+.+.. +..+.+||+.+.+.+.++.... ....|+|+|||+ .+++.. .+++|.|+|+.+
T Consensus 268 ~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 268 MVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp CEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred eeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 3789999998776543 2356699999999998886433 689999999997 566777 599999999999
Q ss_pred CeEEEEEecccc
Q 006229 629 VRKLTFICCYKC 640 (655)
Q Consensus 629 g~~v~~l~~~~~ 640 (655)
++.+.++..+..
T Consensus 347 ~kvv~~I~vg~~ 358 (368)
T 1mda_H 347 DQDQSSVELDKG 358 (368)
T ss_dssp CEEEEECCCCSC
T ss_pred CcEEEEEECCCC
Confidence 999998876654
No 227
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.58 E-value=0.04 Score=60.55 Aligned_cols=123 Identities=11% Similarity=0.154 Sum_probs=79.8
Q ss_pred cEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCC------CcEE
Q 006229 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHD------KKAV 580 (655)
Q Consensus 507 ~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~D------gtVr 580 (655)
.+++.|..+++|.+++..... .+..+.+..+..+ +..-.+ ...-..++.+|+| +++++..+ +.|.
T Consensus 97 ~l~v~~l~s~~I~viD~~t~p-~~p~~~k~ie~~~------~~~~~g-~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~ 167 (462)
T 2ece_A 97 FLIVPGLRSSRIYIIDTKPNP-REPKIIKVIEPEE------VKKVSG-YSRLHTVHCGPDA-IYISALGNEEGEGPGGIL 167 (462)
T ss_dssp EEEEEBTTTCCEEEEECCSCT-TSCEEEEEECHHH------HHHHHC-EEEEEEEEECSSC-EEEEEEEETTSCSCCEEE
T ss_pred EEEEccCCCCeEEEEECCCCC-CCceeeeeechhh------cccccC-CCcccceeECCCe-EEEEcCCCcCCCCCCeEE
Confidence 456777788899999764321 0111111111000 000000 0012346778999 77776666 7899
Q ss_pred EEeCCCCeEEEEecc--cC-CCEEEEEEcCCCCEEEEEe-------------------CCCcEEEEECCCCeEEEEEecc
Q 006229 581 LWCTESFTVKSTLEE--HT-QWITDVRFSPSLSRLATSS-------------------ADRTVRVWDTENVRKLTFICCY 638 (655)
Q Consensus 581 IWDl~t~~~l~tl~g--H~-~~ItsVafsPdg~~LaSgS-------------------~DgtVrVWDl~tg~~v~~l~~~ 638 (655)
+.|.++++.+.++.. +. ..-+.+.|+|+++.++|+. .+.+|.+||+.+++.+.++...
T Consensus 168 vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 168 MLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp EECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred EEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 999999999999962 22 2345688999999999985 3679999999999888887764
No 228
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.53 E-value=0.0069 Score=65.34 Aligned_cols=75 Identities=15% Similarity=0.011 Sum_probs=61.7
Q ss_pred EEEcCCCCEEEEEeC-----CCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEe----------CCCcEEEEE
Q 006229 561 CHFSPDGKLLATGGH-----DKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSS----------ADRTVRVWD 625 (655)
Q Consensus 561 l~fSpdG~lLaSgs~-----DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS----------~DgtVrVWD 625 (655)
....|+++++++... ++.|.+.|..+++.+.++..-... .|+++|||++|+.++ .+++|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 455789998888866 679999999999999988744444 399999999887775 367899999
Q ss_pred CCCCeEEEEEec
Q 006229 626 TENVRKLTFICC 637 (655)
Q Consensus 626 l~tg~~v~~l~~ 637 (655)
+.+++.+.++..
T Consensus 116 ~~t~~v~~~I~v 127 (386)
T 3sjl_D 116 PVTLLPTADIEL 127 (386)
T ss_dssp TTTCCEEEEEEE
T ss_pred CCCCeEEEEEEC
Confidence 999999888754
No 229
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.09 E-value=0.014 Score=63.77 Aligned_cols=75 Identities=13% Similarity=0.116 Sum_probs=63.0
Q ss_pred EEEEcCCCCEEEEEeC----------CCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCC-EEEEEe-CCCcEEEEECC
Q 006229 560 SCHFSPDGKLLATGGH----------DKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLS-RLATSS-ADRTVRVWDTE 627 (655)
Q Consensus 560 sl~fSpdG~lLaSgs~----------DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~-~LaSgS-~DgtVrVWDl~ 627 (655)
.++|++|++.|++... +++|.+.|+.+.+.+.++..- .....|.|+||++ +++++. .+++|.|+|+.
T Consensus 323 ~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~ 401 (426)
T 3c75_H 323 QTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAA 401 (426)
T ss_dssp CEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred eeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECC
Confidence 4689999887776642 357999999999999988622 2588999999999 888888 59999999999
Q ss_pred CCeEEEEE
Q 006229 628 NVRKLTFI 635 (655)
Q Consensus 628 tg~~v~~l 635 (655)
+++.+.++
T Consensus 402 t~kvv~tI 409 (426)
T 3c75_H 402 TGEELRSV 409 (426)
T ss_dssp TCCEEEEE
T ss_pred CCCEEEEe
Confidence 99999887
No 230
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.85 E-value=0.1 Score=56.97 Aligned_cols=97 Identities=19% Similarity=0.092 Sum_probs=64.6
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCe------------EEEEec-c-----cCCCEEEEEEcC---CCCEEEEE
Q 006229 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFT------------VKSTLE-E-----HTQWITDVRFSP---SLSRLATS 615 (655)
Q Consensus 557 ~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~------------~l~tl~-g-----H~~~ItsVafsP---dg~~LaSg 615 (655)
.|..+..||+|++||..+ +..|.|-.+..+. ..+++. + ....|..|.|+| .+..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 577899999999999986 4688888876221 112332 1 256799999999 45689999
Q ss_pred eCCCcEEEEECCCC-eEEEEEecccceee----eeceeeEEEec
Q 006229 616 SADRTVRVWDTENV-RKLTFICCYKCIFV----STAIGSCFFAP 654 (655)
Q Consensus 616 S~DgtVrVWDl~tg-~~v~~l~~~~~~v~----s~~Vss~~F~P 654 (655)
..|++||+||+... +....+......+. ...|.+++|.+
T Consensus 146 tsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~ 189 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSK 189 (452)
T ss_dssp ETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECT
T ss_pred ecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcC
Confidence 99999999999852 11113432222111 14566777764
No 231
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.75 E-value=0.091 Score=53.68 Aligned_cols=94 Identities=9% Similarity=0.022 Sum_probs=66.5
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEeccc-----CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEE
Q 006229 561 CHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEH-----TQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFI 635 (655)
Q Consensus 561 l~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH-----~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l 635 (655)
..+++||+.|+++..+++|.++|..+.+.+.++.-- -..++.+.|. ++...+....++.|.+-|..+++.+..+
T Consensus 110 ~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I 188 (266)
T 2iwa_A 110 WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWI 188 (266)
T ss_dssp CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEE
T ss_pred EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEE
Confidence 345668887777777899999999999888877521 1246788888 6755555556889999999999999988
Q ss_pred ecccce--------eeeeceeeEEEecC
Q 006229 636 CCYKCI--------FVSTAIGSCFFAPT 655 (655)
Q Consensus 636 ~~~~~~--------v~s~~Vss~~F~P~ 655 (655)
...... -.....+.++|+|+
T Consensus 189 ~~~g~~~~~~~~~~~~~~v~nGIa~~~~ 216 (266)
T 2iwa_A 189 LLPNLRKKLIDEGFRDIDVLNGIAWDQE 216 (266)
T ss_dssp ECHHHHHHHHHTTCTTCCCEEEEEEETT
T ss_pred ECCCcccccccccccccCceEEEEEcCC
Confidence 754210 01123467778774
No 232
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.71 E-value=0.095 Score=53.50 Aligned_cols=91 Identities=10% Similarity=0.028 Sum_probs=64.8
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCeEEEEeccc----C-CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecc
Q 006229 564 SPDGKLLATGGHDKKAVLWCTESFTVKSTLEEH----T-QWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCY 638 (655)
Q Consensus 564 SpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH----~-~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~ 638 (655)
++|++.|+.+..+.+|.++|..+++.+.++.-. . ..++.+.|. +|+..+..-.+..|.+-|..+++.+..+...
T Consensus 133 t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~ 211 (262)
T 3nol_A 133 THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLN 211 (262)
T ss_dssp EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECT
T ss_pred ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECC
Confidence 356776666666788999999999988887532 1 345667776 6765555556889999999999999998764
Q ss_pred ccee-------eeeceeeEEEecC
Q 006229 639 KCIF-------VSTAIGSCFFAPT 655 (655)
Q Consensus 639 ~~~v-------~s~~Vss~~F~P~ 655 (655)
...- .....+.++|+|+
T Consensus 212 ~L~~~~~~~~~~~~vlNGIA~dp~ 235 (262)
T 3nol_A 212 GILAEAGPLPSPIDVLNGIAWDKE 235 (262)
T ss_dssp TGGGGSCSCCSSCCCEEEEEEETT
T ss_pred cCccccccccCcCCceEEEEEcCC
Confidence 3211 1124578999884
No 233
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.64 E-value=0.14 Score=52.32 Aligned_cols=106 Identities=8% Similarity=-0.040 Sum_probs=72.1
Q ss_pred eeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecc--cC---CCEEEEEEcCCCCEEEEEeCCCc
Q 006229 546 TEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEE--HT---QWITDVRFSPSLSRLATSSADRT 620 (655)
Q Consensus 546 ~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~g--H~---~~ItsVafsPdg~~LaSgS~Dgt 620 (655)
+.++++..-... ..|+ +|++.|+.+..+.+|.++|..+++.+.++.- +. ..++.+.|. +|+..+..-.+..
T Consensus 127 ~~~~ti~~~~eG-wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~ 202 (268)
T 3nok_A 127 QRERTTRYSGEG-WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSD 202 (268)
T ss_dssp EEEEEEECSSCC-CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSE
T ss_pred cEEEEEeCCCce-eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCe
Confidence 455555432222 2333 5688777777799999999999998888753 22 245677877 6765555556789
Q ss_pred EEEEECCCCeEEEEEecccce--------eeeeceeeEEEecC
Q 006229 621 VRVWDTENVRKLTFICCYKCI--------FVSTAIGSCFFAPT 655 (655)
Q Consensus 621 VrVWDl~tg~~v~~l~~~~~~--------v~s~~Vss~~F~P~ 655 (655)
|.+-|.++++.+.++...... -.....+.++|+|+
T Consensus 203 I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~ 245 (268)
T 3nok_A 203 VLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPG 245 (268)
T ss_dssp EEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTT
T ss_pred EEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCC
Confidence 999999999999998765321 01124578898874
No 234
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.47 E-value=0.27 Score=50.15 Aligned_cols=75 Identities=5% Similarity=-0.064 Sum_probs=53.5
Q ss_pred EEEEcCCCCEE-EEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecc
Q 006229 560 SCHFSPDGKLL-ATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCY 638 (655)
Q Consensus 560 sl~fSpdG~lL-aSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~ 638 (655)
.++++ +..| ++.-.++.|.++|..+++.+.++..-...= ..+++||.+|+.+..+++|.++|..+.+.+..+...
T Consensus 70 Gi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g--~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg 145 (266)
T 2iwa_A 70 GLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDG--WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVK 145 (266)
T ss_dssp EEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEECCSSSC--CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECE
T ss_pred EEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEECCCCCe--EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEEC
Confidence 45554 4444 444567899999999999999885221221 235567877777777889999999998888877654
No 235
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.43 E-value=0.16 Score=52.02 Aligned_cols=110 Identities=6% Similarity=-0.064 Sum_probs=70.7
Q ss_pred cEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 006229 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES 586 (655)
Q Consensus 507 ~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t 586 (655)
.+..+.+.++.|+.++..+++. ...+ +... ..-..+++.. +++.+..-.++.+.+||..+
T Consensus 66 ~Ly~stG~~g~v~~iD~~Tgkv----------------~~~~--l~~~-~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~T 125 (268)
T 3nok_A 66 HFFESTGHQGTLRQLSLESAQP----------------VWME--RLGN-IFAEGLASDG-ERLYQLTWTEGLLFTWSGMP 125 (268)
T ss_dssp EEEEEETTTTEEEECCSSCSSC----------------SEEE--ECTT-CCEEEEEECS-SCEEEEESSSCEEEEEETTT
T ss_pred EEEEEcCCCCEEEEEECCCCcE----------------EeEE--CCCC-cceeEEEEeC-CEEEEEEccCCEEEEEECCc
Confidence 4555666777788776555421 1122 2211 1112244432 34555556789999999999
Q ss_pred CeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEeccc
Q 006229 587 FTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYK 639 (655)
Q Consensus 587 ~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~ 639 (655)
++.+.++.. ...=+.|+ +++..|+.+..+++|.++|..+.+.+..+....
T Consensus 126 l~~~~ti~~-~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~ 175 (268)
T 3nok_A 126 PQRERTTRY-SGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKL 175 (268)
T ss_dssp TEEEEEEEC-SSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred CcEEEEEeC-CCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCC
Confidence 999999973 22224444 567888777778899999999999888876643
No 236
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=95.40 E-value=0.018 Score=62.45 Aligned_cols=14 Identities=14% Similarity=0.418 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHhhh
Q 006229 52 LFEWWSVFWDIFIA 65 (655)
Q Consensus 52 L~EWw~~FWd~f~a 65 (655)
..+.|.++.+.+..
T Consensus 336 ~~~~~~~~~~~~~~ 349 (449)
T 3iot_A 336 MSAFWYAVRTAVIN 349 (449)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 45666666666554
No 237
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.28 E-value=0.35 Score=48.70 Aligned_cols=106 Identities=8% Similarity=0.014 Sum_probs=70.8
Q ss_pred eeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccC-----CCEEEEEEcCCCCEEEEEeCCCc
Q 006229 546 TEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHT-----QWITDVRFSPSLSRLATSSADRT 620 (655)
Q Consensus 546 ~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~-----~~ItsVafsPdg~~LaSgS~Dgt 620 (655)
+.+.++..-... ..|+ +|+..|+.+..+.+|.++|..+.+.+.++.-.. ..++-+.|. +|+..+..-.+..
T Consensus 96 ~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~ 171 (243)
T 3mbr_X 96 TPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSR 171 (243)
T ss_dssp EEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTE
T ss_pred cEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCe
Confidence 555555533333 2333 467766666668999999999999888875322 345667765 6665555546779
Q ss_pred EEEEECCCCeEEEEEecccce--------eeeeceeeEEEecC
Q 006229 621 VRVWDTENVRKLTFICCYKCI--------FVSTAIGSCFFAPT 655 (655)
Q Consensus 621 VrVWDl~tg~~v~~l~~~~~~--------v~s~~Vss~~F~P~ 655 (655)
|.+-|.++++.+..+...... -.....+.++|+|+
T Consensus 172 I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~ 214 (243)
T 3mbr_X 172 IARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAE 214 (243)
T ss_dssp EEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETT
T ss_pred EEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCC
Confidence 999999999999998755321 01224578999874
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.22 E-value=0.23 Score=49.64 Aligned_cols=76 Identities=12% Similarity=-0.016 Sum_probs=48.9
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q 006229 555 TSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTF 634 (655)
Q Consensus 555 ~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~ 634 (655)
...+.++.+.+++.+++.. +.|..|| .+++.+..+......|.++.++++|. |..++.++.|..+|. ++..+..
T Consensus 176 ~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~ 249 (330)
T 3hxj_A 176 DAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWR 249 (330)
T ss_dssp SCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEE
T ss_pred CCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEE
Confidence 3456677777777754443 7788888 67776666665566778888877764 444556677777774 4544444
Q ss_pred Ee
Q 006229 635 IC 636 (655)
Q Consensus 635 l~ 636 (655)
+.
T Consensus 250 ~~ 251 (330)
T 3hxj_A 250 FK 251 (330)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 239
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.19 E-value=0.36 Score=49.93 Aligned_cols=71 Identities=8% Similarity=-0.032 Sum_probs=52.6
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecc
Q 006229 566 DGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCY 638 (655)
Q Consensus 566 dG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~ 638 (655)
++..|+.++.|+.|..+|.++++.+-.+...........+. +..|+.++.|+.|..+|.++|+.+-.+...
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~ 172 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLD 172 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCC
Confidence 45677888899999999999999876665443322222232 458888899999999999999887666543
No 240
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.17 E-value=0.12 Score=58.13 Aligned_cols=63 Identities=10% Similarity=-0.137 Sum_probs=47.5
Q ss_pred CCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEeccc
Q 006229 576 DKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYK 639 (655)
Q Consensus 576 DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~ 639 (655)
++.|..||+.+++.+-++... ..+.+..+...+.+++.++.|+.|++||.++|+.+..+....
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 505 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPS 505 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCC
Confidence 578999999999987766522 233333333456788889999999999999999998887554
No 241
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.09 E-value=0.15 Score=51.10 Aligned_cols=77 Identities=12% Similarity=0.008 Sum_probs=57.0
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEE
Q 006229 554 STSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLT 633 (655)
Q Consensus 554 H~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~ 633 (655)
+...+.++.+.+++. |+.++.++.|..||.. ++.+..+......+.++.+.+++..++.. +.|..|| .+++.+.
T Consensus 135 ~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~ 208 (330)
T 3hxj_A 135 KKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKW 208 (330)
T ss_dssp SSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEE
T ss_pred CCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEE
Confidence 344566777777787 5557788999999998 88777776666778888888888765544 7889999 6776665
Q ss_pred EEe
Q 006229 634 FIC 636 (655)
Q Consensus 634 ~l~ 636 (655)
.+.
T Consensus 209 ~~~ 211 (330)
T 3hxj_A 209 NFY 211 (330)
T ss_dssp EEC
T ss_pred EEc
Confidence 544
No 242
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.06 E-value=0.55 Score=48.47 Aligned_cols=70 Identities=10% Similarity=0.055 Sum_probs=53.4
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEEEecc-cCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEec
Q 006229 566 DGKLLATGGHDKKAVLWCTESFTVKSTLEE-HTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICC 637 (655)
Q Consensus 566 dG~lLaSgs~DgtVrIWDl~t~~~l~tl~g-H~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~ 637 (655)
++..|+.++.++.|..+|..+++.+-.... ....+....+ .+..|+.++.+|.|.+||.++++.+..+..
T Consensus 276 ~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 276 DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 366788888899999999999998766652 2223333333 267899999999999999999998877665
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=94.78 E-value=2.3 Score=41.65 Aligned_cols=73 Identities=7% Similarity=0.018 Sum_probs=48.6
Q ss_pred CCeeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeC---CCcEEEEECCC
Q 006229 556 SKVESCHFSPDGK-LLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSA---DRTVRVWDTEN 628 (655)
Q Consensus 556 ~~V~sl~fSpdG~-lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~---DgtVrVWDl~t 628 (655)
.....+++++++. ++++-...+.|.++|++.......+.........++++|++.+|+.+.. .+.|.+++++.
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC
Confidence 4578999999755 4445556688999998754332223222246789999997666555543 36888888864
No 244
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.78 E-value=0.032 Score=64.84 Aligned_cols=71 Identities=11% Similarity=0.064 Sum_probs=51.0
Q ss_pred CeeEEEEc-CCCCEEEEEeC-C----CcEEEEeCCCC-eEEE-EecccCCCEEEEEEcCCCCEEEEEeCC-----CcEEE
Q 006229 557 KVESCHFS-PDGKLLATGGH-D----KKAVLWCTESF-TVKS-TLEEHTQWITDVRFSPSLSRLATSSAD-----RTVRV 623 (655)
Q Consensus 557 ~V~sl~fS-pdG~lLaSgs~-D----gtVrIWDl~t~-~~l~-tl~gH~~~ItsVafsPdg~~LaSgS~D-----gtVrV 623 (655)
.+....|| |||++||-+.. + .+|+++|+.++ +.+. .+. ....+++|+|||+.|+..+.| ..|.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57889999 99998775433 2 35999999998 6321 111 124578999999988877765 25888
Q ss_pred EECCCCe
Q 006229 624 WDTENVR 630 (655)
Q Consensus 624 WDl~tg~ 630 (655)
|++.++.
T Consensus 252 ~~lgt~~ 258 (751)
T 2xe4_A 252 HVMGKLQ 258 (751)
T ss_dssp EETTSCG
T ss_pred EECCCCc
Confidence 8988764
No 245
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.77 E-value=0.15 Score=58.31 Aligned_cols=63 Identities=8% Similarity=0.007 Sum_probs=49.5
Q ss_pred CCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEeccc
Q 006229 576 DKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYK 639 (655)
Q Consensus 576 DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~ 639 (655)
++.|+.||+.+++.+-.+..+. .+....+...+.+|+.++.|+.|++||.++++.+..+....
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~ 499 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQS 499 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCC
Confidence 4789999999999886665333 33334445568899999999999999999999998886653
No 246
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.61 E-value=0.17 Score=58.62 Aligned_cols=71 Identities=14% Similarity=0.080 Sum_probs=50.6
Q ss_pred eEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCeE--EEEec-ccCCCEEEEEEcCCCCEEEEEeC---CCcEEEEECC
Q 006229 559 ESCHFSPDGKLLATGGHD-----KKAVLWCTESFTV--KSTLE-EHTQWITDVRFSPSLSRLATSSA---DRTVRVWDTE 627 (655)
Q Consensus 559 ~sl~fSpdG~lLaSgs~D-----gtVrIWDl~t~~~--l~tl~-gH~~~ItsVafsPdg~~LaSgS~---DgtVrVWDl~ 627 (655)
..+.|+|||+.|+....| ..|.+|++.++.. ...+. .+.....++.|+|||++|+..+. ...|.++|+.
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 468899999987777765 2588888877632 22333 23456778999999998876663 3358889998
Q ss_pred CC
Q 006229 628 NV 629 (655)
Q Consensus 628 tg 629 (655)
++
T Consensus 304 ~~ 305 (751)
T 2xe4_A 304 KG 305 (751)
T ss_dssp SC
T ss_pred CC
Confidence 75
No 247
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=94.58 E-value=0.8 Score=46.06 Aligned_cols=69 Identities=12% Similarity=0.112 Sum_probs=51.3
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecc
Q 006229 567 GKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCY 638 (655)
Q Consensus 567 G~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~ 638 (655)
+++.+..-.++.+.+||..+++.+.++..-. .=+.|+ +++..|+.+..+++|.++|..+.+.+..+...
T Consensus 75 ~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~ 143 (243)
T 3mbr_X 75 DRLIQLTWRNHEGFVYDLATLTPRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVT 143 (243)
T ss_dssp TEEEEEESSSSEEEEEETTTTEEEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECE
T ss_pred CEEEEEEeeCCEEEEEECCcCcEEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEc
Confidence 4455555678999999999999999997332 224444 45666666666889999999999888887664
No 248
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.42 E-value=0.63 Score=53.47 Aligned_cols=78 Identities=14% Similarity=0.049 Sum_probs=58.7
Q ss_pred eEEEEcCCCCEEEEEeCCCc-------------------EEEEeCCCCeEEEEecc--cC-------CCEEEEEEcCCCC
Q 006229 559 ESCHFSPDGKLLATGGHDKK-------------------AVLWCTESFTVKSTLEE--HT-------QWITDVRFSPSLS 610 (655)
Q Consensus 559 ~sl~fSpdG~lLaSgs~Dgt-------------------VrIWDl~t~~~l~tl~g--H~-------~~ItsVafsPdg~ 610 (655)
..+.+++++.+|+.+..++. |..||.++|+.+-.+.. |. ..+....+..+|+
T Consensus 238 ~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~ 317 (689)
T 1yiq_A 238 DSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGK 317 (689)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred cceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCc
Confidence 46889998889999888764 99999999999877753 32 1222223333565
Q ss_pred ---EEEEEeCCCcEEEEECCCCeEEEEEe
Q 006229 611 ---RLATSSADRTVRVWDTENVRKLTFIC 636 (655)
Q Consensus 611 ---~LaSgS~DgtVrVWDl~tg~~v~~l~ 636 (655)
.|+.++.||.|+++|.++|+.+....
T Consensus 318 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~ 346 (689)
T 1yiq_A 318 PRKVLMQAPKNGFFYVIDRATGELLSAKG 346 (689)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEEEECCCCeEEEEECCCCCEecccc
Confidence 79999999999999999999885443
No 249
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=94.42 E-value=0.59 Score=49.25 Aligned_cols=98 Identities=6% Similarity=-0.071 Sum_probs=64.2
Q ss_pred eeEEEE---cCCCCEEEEEe-------------CCCcEEEEeCC---CCeEEEEec--ccC-----------CCEEEEEE
Q 006229 558 VESCHF---SPDGKLLATGG-------------HDKKAVLWCTE---SFTVKSTLE--EHT-----------QWITDVRF 605 (655)
Q Consensus 558 V~sl~f---SpdG~lLaSgs-------------~DgtVrIWDl~---t~~~l~tl~--gH~-----------~~ItsVaf 605 (655)
+..|.| .++++++++.. .+..|..+|+. +++.+.... +.. ..+.+++.
T Consensus 65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav 144 (334)
T 2p9w_A 65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ 144 (334)
T ss_dssp EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEE
T ss_pred eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEE
Confidence 578999 68888887643 26789999999 777654443 222 24899999
Q ss_pred cCCCCEEEEEeCC-CcEEEEECCCCeEEEEEecccceeeeeceeeEEEecC
Q 006229 606 SPSLSRLATSSAD-RTVRVWDTENVRKLTFICCYKCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 606 sPdg~~LaSgS~D-gtVrVWDl~tg~~v~~l~~~~~~v~s~~Vss~~F~P~ 655 (655)
.++|+..++++.- +.|...|.........+..........-.+.++|+|+
T Consensus 145 D~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pd 195 (334)
T 2p9w_A 145 DRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPH 195 (334)
T ss_dssp CTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETT
T ss_pred CCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCC
Confidence 9999999999988 8877777664322222222111112233557777774
No 250
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.34 E-value=0.44 Score=48.56 Aligned_cols=91 Identities=13% Similarity=0.127 Sum_probs=65.2
Q ss_pred eeeEEeecCCCC--CeeEEEEcCCCCEEEEEeCCC--cEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEe-CCC
Q 006229 545 FTEFQLIPASTS--KVESCHFSPDGKLLATGGHDK--KAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSS-ADR 619 (655)
Q Consensus 545 ~~~v~~l~gH~~--~V~sl~fSpdG~lLaSgs~Dg--tVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS-~Dg 619 (655)
++.++++. |.. -.-.|.|+ ++.++.+++.++ .|+++|+++++.+..+.-. ..+....+.+++..|+.+. .++
T Consensus 31 ~~vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~ 107 (262)
T 3nol_A 31 YQIVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNG 107 (262)
T ss_dssp EEEEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSS
T ss_pred eEEEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCC
Confidence 45556663 432 24688898 788888888876 8999999999998887532 3333333334466666665 488
Q ss_pred cEEEEECCCCeEEEEEecc
Q 006229 620 TVRVWDTENVRKLTFICCY 638 (655)
Q Consensus 620 tVrVWDl~tg~~v~~l~~~ 638 (655)
.+.+||..+++.+.+|...
T Consensus 108 ~v~v~D~~t~~~~~ti~~~ 126 (262)
T 3nol_A 108 LGFVWNIRNLRQVRSFNYD 126 (262)
T ss_dssp EEEEEETTTCCEEEEEECS
T ss_pred EEEEEECccCcEEEEEECC
Confidence 9999999999999888753
No 251
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.16 E-value=0.24 Score=55.87 Aligned_cols=64 Identities=13% Similarity=-0.070 Sum_probs=47.1
Q ss_pred CCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEecccc
Q 006229 576 DKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKC 640 (655)
Q Consensus 576 DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~ 640 (655)
++.|..||+.+++.+-....+. .+..-.+...+.+++.++.|+.|+.||.++|+.+-.+.....
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g 528 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSG 528 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCC
Confidence 6889999999998876655332 222212223477888899999999999999999988876543
No 252
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=94.00 E-value=0.78 Score=52.55 Aligned_cols=80 Identities=13% Similarity=0.015 Sum_probs=60.6
Q ss_pred eeEEEEcCCCCEEEEEeCCC-------------------cEEEEeCCCCeEEEEecc--cC-------CCEEEEEEcCCC
Q 006229 558 VESCHFSPDGKLLATGGHDK-------------------KAVLWCTESFTVKSTLEE--HT-------QWITDVRFSPSL 609 (655)
Q Consensus 558 V~sl~fSpdG~lLaSgs~Dg-------------------tVrIWDl~t~~~l~tl~g--H~-------~~ItsVafsPdg 609 (655)
...+.+++++.+|+.+..++ .|..+|.++|+.+-.+.. |. .....+....+|
T Consensus 245 w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG 324 (677)
T 1kb0_A 245 WDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAG 324 (677)
T ss_dssp CSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETT
T ss_pred ccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCC
Confidence 45788999988888887664 599999999998877653 32 112223334477
Q ss_pred ---CEEEEEeCCCcEEEEECCCCeEEEEEec
Q 006229 610 ---SRLATSSADRTVRVWDTENVRKLTFICC 637 (655)
Q Consensus 610 ---~~LaSgS~DgtVrVWDl~tg~~v~~l~~ 637 (655)
..|+.++.+|.|+++|.++|+.+..+..
T Consensus 325 ~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~ 355 (677)
T 1kb0_A 325 KPRKVILHAPKNGFFFVLDRTNGKFISAKNF 355 (677)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEES
T ss_pred cEeeEEEEECCCCEEEEEECCCCCEeccccc
Confidence 6899999999999999999999877653
No 253
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=93.85 E-value=0.75 Score=50.53 Aligned_cols=72 Identities=10% Similarity=0.117 Sum_probs=54.8
Q ss_pred eeEEEEcCCCCEEEEEe-------------------CCCcEEEEeCCCCeEEEEeccc-C-CCEEEEEE--cCCCCEEEE
Q 006229 558 VESCHFSPDGKLLATGG-------------------HDKKAVLWCTESFTVKSTLEEH-T-QWITDVRF--SPSLSRLAT 614 (655)
Q Consensus 558 V~sl~fSpdG~lLaSgs-------------------~DgtVrIWDl~t~~~l~tl~gH-~-~~ItsVaf--sPdg~~LaS 614 (655)
-..+-|+|+++++++.. .+.+|.+||+.+++.+.++.-- . .....|+| +|++++++.
T Consensus 190 ~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV 269 (462)
T 2ece_A 190 AYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFI 269 (462)
T ss_dssp CCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEE
T ss_pred cceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEE
Confidence 34688899999998885 3789999999999888887632 1 34456666 999999887
Q ss_pred Ee------CCCcEEEEECCCC
Q 006229 615 SS------ADRTVRVWDTENV 629 (655)
Q Consensus 615 gS------~DgtVrVWDl~tg 629 (655)
++ .+++|.+|..+.+
T Consensus 270 ~~e~~~~~Lss~V~v~~~d~g 290 (462)
T 2ece_A 270 NMVVSLKDLSSSIWLWFYEDG 290 (462)
T ss_dssp EEEEETTTCCEEEEEEEEETT
T ss_pred EEeeeccCCCceEEEEEecCC
Confidence 77 4668888776654
No 254
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=93.37 E-value=1.3 Score=44.79 Aligned_cols=85 Identities=13% Similarity=0.078 Sum_probs=59.5
Q ss_pred eeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCC-C-cEE
Q 006229 545 FTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSAD-R-TVR 622 (655)
Q Consensus 545 ~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~D-g-tVr 622 (655)
.+.+..+... .....++|+++|+++++-..++.|..||.++. ....+. ....+..|+|+++|+++++.... + .|.
T Consensus 22 ~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~ 98 (306)
T 2p4o_A 22 AKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVV 98 (306)
T ss_dssp EEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred ceEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEE
Confidence 4455556443 45778999999998888778899999998764 333332 33568999999999976665443 2 466
Q ss_pred EEECCCCeEE
Q 006229 623 VWDTENVRKL 632 (655)
Q Consensus 623 VWDl~tg~~v 632 (655)
.+|..+++..
T Consensus 99 ~~d~~~g~~~ 108 (306)
T 2p4o_A 99 SLVKSDGTVE 108 (306)
T ss_dssp EEECTTSCEE
T ss_pred EEcCCCCeEE
Confidence 6777777654
No 255
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=93.10 E-value=0.082 Score=59.93 Aligned_cols=81 Identities=19% Similarity=0.144 Sum_probs=59.0
Q ss_pred eeEEEEcCCCCEEEEEe-CCCcEEEEeCCCCe------------EEEEecccCCCEEEEEEcCCCCEEEE-EeCCCcEEE
Q 006229 558 VESCHFSPDGKLLATGG-HDKKAVLWCTESFT------------VKSTLEEHTQWITDVRFSPSLSRLAT-SSADRTVRV 623 (655)
Q Consensus 558 V~sl~fSpdG~lLaSgs-~DgtVrIWDl~t~~------------~l~tl~gH~~~ItsVafsPdg~~LaS-gS~DgtVrV 623 (655)
..+|.|+|||+++++++ .+.+|.++|+.+.+ .+..+. -...-..++|+|+| ++++ .-.|+.|-+
T Consensus 279 PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG-~aY~t~~ldsqV~k 356 (595)
T 1fwx_A 279 PHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRG-NAYTSLFLDSQVVK 356 (595)
T ss_dssp CCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTS-EEEEEETTTTEEEE
T ss_pred ceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECCCC-eEEEEEecCCcEEE
Confidence 45899999999766665 67899999998653 333332 23457889999999 5554 456999999
Q ss_pred EECCC----------CeEEEEEecccc
Q 006229 624 WDTEN----------VRKLTFICCYKC 640 (655)
Q Consensus 624 WDl~t----------g~~v~~l~~~~~ 640 (655)
||+.+ ...+..+..+..
T Consensus 357 wdi~~a~~~~~g~~~~~vi~kidV~yq 383 (595)
T 1fwx_A 357 WNIEDAIRAYAGEKVDPIKDKLDVHYQ 383 (595)
T ss_dssp EEHHHHHHHHHTCSCCCEEEEEECSSC
T ss_pred EEhhHhhhhhcccccceeEEEeecccc
Confidence 99987 556666666533
No 256
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=92.92 E-value=3 Score=42.05 Aligned_cols=74 Identities=9% Similarity=0.057 Sum_probs=49.3
Q ss_pred CeeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEec----c-cCCCEEEEEEcC-CCCEEEEEeC------------
Q 006229 557 KVESCHFSP-DGKLLATGGHDKKAVLWCTESFTVKSTLE----E-HTQWITDVRFSP-SLSRLATSSA------------ 617 (655)
Q Consensus 557 ~V~sl~fSp-dG~lLaSgs~DgtVrIWDl~t~~~l~tl~----g-H~~~ItsVafsP-dg~~LaSgS~------------ 617 (655)
.+..+++++ +|++ +.+...+.|.++|..++... .+. + .....+.|++.+ +|++.++-..
T Consensus 81 ~p~gi~~~~~~g~l-~v~d~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 81 RTYDISYNLQNNQL-YIVDCYYHLSVVGSEGGHAT-QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp CEEEEEEETTTTEE-EEEETTTEEEEECTTCEECE-EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHH
T ss_pred CCceEEEcCCCCcE-EEEECCCCEEEEeCCCCEEE-EecccCCCCcccccceEEEecCCCEEEEECCcccccccccceeh
Confidence 467899998 6654 44444555888898765432 221 1 123578999999 9987776543
Q ss_pred -----CCcEEEEECCCCeEE
Q 006229 618 -----DRTVRVWDTENVRKL 632 (655)
Q Consensus 618 -----DgtVrVWDl~tg~~v 632 (655)
++.|.+||..+++..
T Consensus 159 ~~~~~~g~v~~~d~~~~~~~ 178 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKETT 178 (322)
T ss_dssp HHTCCCEEEEEEETTTTEEE
T ss_pred cccCCCceEEEEeCCCCEEE
Confidence 367899998777543
No 257
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=92.84 E-value=7.5 Score=37.82 Aligned_cols=74 Identities=9% Similarity=0.026 Sum_probs=49.2
Q ss_pred CCeeEEEEcCCCCEEEEEeC---CCcEEEEeCCCCeEEEEe-cccCCCEEEEEEcCCCCEEEE-EeCCCcEEEEECCCCe
Q 006229 556 SKVESCHFSPDGKLLATGGH---DKKAVLWCTESFTVKSTL-EEHTQWITDVRFSPSLSRLAT-SSADRTVRVWDTENVR 630 (655)
Q Consensus 556 ~~V~sl~fSpdG~lLaSgs~---DgtVrIWDl~t~~~l~tl-~gH~~~ItsVafsPdg~~LaS-gS~DgtVrVWDl~tg~ 630 (655)
.....++++|++..|+.+.. .+.|.+++++... ...+ ...-...+.++|++++.+|+. -...++|.++|+....
T Consensus 122 ~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~ 200 (267)
T 1npe_A 122 VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG 200 (267)
T ss_dssp SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE
T ss_pred CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc
Confidence 34678999996665555443 3678888876432 2222 233346789999998766554 4456789999997543
No 258
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=92.00 E-value=1.2 Score=50.49 Aligned_cols=64 Identities=8% Similarity=-0.144 Sum_probs=45.8
Q ss_pred CCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEeccc
Q 006229 575 HDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYK 639 (655)
Q Consensus 575 ~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~ 639 (655)
.++.|..||+.+++.+-.... ...+..-.+...+.+|+.++.|+.|+.||.++|+.+-.+....
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~ 514 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPS 514 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CcCeEEEEECCCCCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCC
Confidence 347899999999987765541 1122211122357788889999999999999999998886543
No 259
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=91.98 E-value=2.7 Score=47.97 Aligned_cols=79 Identities=15% Similarity=0.082 Sum_probs=59.1
Q ss_pred eeEEEEcCCCCEEEEEeCCCc-------------------EEEEeCCCCeEEEEecc--cC-------CCEEEEEEcCCC
Q 006229 558 VESCHFSPDGKLLATGGHDKK-------------------AVLWCTESFTVKSTLEE--HT-------QWITDVRFSPSL 609 (655)
Q Consensus 558 V~sl~fSpdG~lLaSgs~Dgt-------------------VrIWDl~t~~~l~tl~g--H~-------~~ItsVafsPdg 609 (655)
..+++++++..+++.+..++. |..+|.++|+.+-.+.. |. ..+....+..+|
T Consensus 232 w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G 311 (668)
T 1kv9_A 232 WDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDG 311 (668)
T ss_dssp CSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETT
T ss_pred ccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCC
Confidence 456789998888888887763 99999999998877653 32 222223333466
Q ss_pred C---EEEEEeCCCcEEEEECCCCeEEEEEe
Q 006229 610 S---RLATSSADRTVRVWDTENVRKLTFIC 636 (655)
Q Consensus 610 ~---~LaSgS~DgtVrVWDl~tg~~v~~l~ 636 (655)
+ .|+.++.||.|+++|.++|+.+..+.
T Consensus 312 ~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~ 341 (668)
T 1kv9_A 312 KPRKVLMQAPKNGFFYVLDRTNGKLISAEK 341 (668)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred cEEEEEEEECCCCEEEEEECCCCCEecccc
Confidence 5 68999999999999999999885543
No 260
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=91.70 E-value=2.2 Score=48.26 Aligned_cols=62 Identities=6% Similarity=-0.041 Sum_probs=47.7
Q ss_pred CeeEEEE-c-CCCCEEEEEe------------------CCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEe
Q 006229 557 KVESCHF-S-PDGKLLATGG------------------HDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSS 616 (655)
Q Consensus 557 ~V~sl~f-S-pdG~lLaSgs------------------~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS 616 (655)
.+..++| + |+++++++++ .++.|.++|.++++.+..+.--. .-.-++++|+|+++++.+
T Consensus 135 ~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~ 213 (595)
T 1fwx_A 135 GIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTS 213 (595)
T ss_dssp SEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEE
T ss_pred CCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEe
Confidence 4678887 5 8999988885 34679999999999888775211 345577999999999999
Q ss_pred CCC
Q 006229 617 ADR 619 (655)
Q Consensus 617 ~Dg 619 (655)
.+.
T Consensus 214 ~~s 216 (595)
T 1fwx_A 214 YNS 216 (595)
T ss_dssp SCT
T ss_pred cCc
Confidence 664
No 261
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=91.37 E-value=0.027 Score=48.20 Aligned_cols=58 Identities=21% Similarity=0.250 Sum_probs=41.9
Q ss_pred hhhhhhhhhc----------cc--ccc---cchhhhhHH-HHHHHH-HHhhcCCCCccchhhhhhhhhhccCCcc
Q 006229 271 LDQFRSGLLQ----------QQ--KSL---TQPYNQLQL-QQLMLQ-AQQNLASPSANDLESRKLRMLHNSRNMG 328 (655)
Q Consensus 271 ~~~~~~~~~~----------~~--~~~---~~~~~~~~~-~q~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (655)
||++|.+|.. |+ -|. .+|.+.|++ ++.|+. .++-.+....|+-|++|||..|+.|+..
T Consensus 16 LD~ir~Efe~~~~e~~~~k~q~~~eyE~ki~~Qi~Emq~Ir~tvyeLE~~h~kmKq~YEeEI~rLr~eLe~r~~q 90 (92)
T 3vp9_A 16 LDAIRQEFLQVSQEANTYRLQNQKDYDFKMNQQLAEMQQIRNTVYERELTHRKMKDAYEEEIKHLKLGLEQRDHQ 90 (92)
T ss_dssp -CCTTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 7999999964 22 243 677888877 777777 6666777889999999999999999743
No 262
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=91.24 E-value=2.9 Score=44.96 Aligned_cols=77 Identities=14% Similarity=0.074 Sum_probs=48.3
Q ss_pred CCCCeeEEEEcCCCCEEEEEeC-CC---cEEEEeCCCCeEE--EEecccCCCEEEEEEcC-CCCEEEEEeCCCcEEEEEC
Q 006229 554 STSKVESCHFSPDGKLLATGGH-DK---KAVLWCTESFTVK--STLEEHTQWITDVRFSP-SLSRLATSSADRTVRVWDT 626 (655)
Q Consensus 554 H~~~V~sl~fSpdG~lLaSgs~-Dg---tVrIWDl~t~~~l--~tl~gH~~~ItsVafsP-dg~~LaSgS~DgtVrVWDl 626 (655)
.......|+|+++|++|+.+.. ++ ...+|....+... ..+. .......++++| ++.++++-..++.|.+||.
T Consensus 177 ~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~ 255 (430)
T 3tc9_A 177 GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDF 255 (430)
T ss_dssp CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEET
T ss_pred CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEEC
Confidence 3455789999999996555554 22 2233332322211 2222 123457788999 7777777777889999999
Q ss_pred CCCeE
Q 006229 627 ENVRK 631 (655)
Q Consensus 627 ~tg~~ 631 (655)
.++..
T Consensus 256 ~~~~~ 260 (430)
T 3tc9_A 256 TTQET 260 (430)
T ss_dssp TTTEE
T ss_pred CCCcE
Confidence 87654
No 263
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=91.22 E-value=1.2 Score=48.45 Aligned_cols=115 Identities=13% Similarity=0.097 Sum_probs=63.4
Q ss_pred CCCCcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEee-cCCCCCeeEEEEcC---CCCEEEEEeCCCc
Q 006229 503 TDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLI-PASTSKVESCHFSP---DGKLLATGGHDKK 578 (655)
Q Consensus 503 ~~~~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l-~gH~~~V~sl~fSp---dG~lLaSgs~Dgt 578 (655)
.+.+++|+.. .+.+|.+...+.+........ ....-...++. +..+ .....+|..+.||| .+..|++=..|++
T Consensus 74 SpsG~lLAl~-g~~~V~Vv~LP~~~~~~~~~~-~~~~~q~~ty~-l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~ 150 (452)
T 3pbp_A 74 STSGDLLCLF-NDNEIFVMEVPWGYSNVEDVS-IQDAFQIFHYS-IDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDT 150 (452)
T ss_dssp CTTSSEEEEE-CSSEEEEEECCTTCSCCCCHH-HHHTTEEEEEE-GGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSC
T ss_pred CCCCCEEEEe-cCCeEEEEEecCccccCcccc-cccccceeEEE-cCCcccCCCCceeEEEeccccCCCCeEEEEecCCE
Confidence 5556677665 457888887664421111000 00000000000 0000 11357899999999 4568999999999
Q ss_pred EEEEeCCCC--eEEEEe---------cccCCCEEEEEEcCCCCEEEEEe--CCCcE
Q 006229 579 AVLWCTESF--TVKSTL---------EEHTQWITDVRFSPSLSRLATSS--ADRTV 621 (655)
Q Consensus 579 VrIWDl~t~--~~l~tl---------~gH~~~ItsVafsPdg~~LaSgS--~DgtV 621 (655)
||+||+... ++. .| ..+...|.+++|..++-.|...+ .+|-|
T Consensus 151 Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDI 205 (452)
T 3pbp_A 151 ITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDI 205 (452)
T ss_dssp EEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEE
T ss_pred EEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCE
Confidence 999999742 112 22 23346788899988654444433 44443
No 264
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=90.96 E-value=1.2 Score=45.15 Aligned_cols=72 Identities=13% Similarity=0.061 Sum_probs=50.7
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecc--------------------cCCCEEEEEEcC-CCCEEEEE
Q 006229 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEE--------------------HTQWITDVRFSP-SLSRLATS 615 (655)
Q Consensus 557 ~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~g--------------------H~~~ItsVafsP-dg~~LaSg 615 (655)
...+++|+++|++++++..++.|..||..+++.. .+.. ....+..|++++ +++ |+.+
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~ 97 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIV 97 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEE
Confidence 4567899999998888889999999998876543 2210 123578999998 554 5555
Q ss_pred eCCCcEEEEECCCCe
Q 006229 616 SADRTVRVWDTENVR 630 (655)
Q Consensus 616 S~DgtVrVWDl~tg~ 630 (655)
...+.|.++|..++.
T Consensus 98 d~~~~i~~~d~~~g~ 112 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGH 112 (322)
T ss_dssp ETTTEEEEECTTCEE
T ss_pred ECCCCEEEEeCCCCE
Confidence 455568888877553
No 265
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=90.89 E-value=2.8 Score=42.24 Aligned_cols=81 Identities=14% Similarity=0.123 Sum_probs=61.3
Q ss_pred EeecCCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEec-ccCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 006229 549 QLIPASTSKVESCHFSPDGK-LLATGGHDKKAVLWCTESFTVKSTLE-EHTQWITDVRFSPSLSRLATSSADRTVRVWDT 626 (655)
Q Consensus 549 ~~l~gH~~~V~sl~fSpdG~-lLaSgs~DgtVrIWDl~t~~~l~tl~-gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl 626 (655)
+.+.+-...+..++|+|++. ++++...++.|...|.. ++.++.+. +-....-.|++.+++.++++.-.++.|.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 45667667899999999766 55557778899999998 88877763 22356778888888887777667788999988
Q ss_pred CCCe
Q 006229 627 ENVR 630 (655)
Q Consensus 627 ~tg~ 630 (655)
....
T Consensus 99 ~~~~ 102 (255)
T 3qqz_A 99 TPNS 102 (255)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 6544
No 266
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=90.75 E-value=6.9 Score=41.43 Aligned_cols=94 Identities=14% Similarity=0.114 Sum_probs=67.2
Q ss_pred ceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCC-----CCeEEEEec-ccC-CCEEEEEE--cCCCC-EE
Q 006229 543 FTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTE-----SFTVKSTLE-EHT-QWITDVRF--SPSLS-RL 612 (655)
Q Consensus 543 ~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~-----t~~~l~tl~-gH~-~~ItsVaf--sPdg~-~L 612 (655)
.+.+.++++.-- +.+..|.+.+....|+.+-+|.-|..+|.+ +++.+..+. +|- ..+..|++ .++++ +|
T Consensus 168 ~~~~lVR~f~lg-sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyL 246 (355)
T 3amr_A 168 ISGKKVRAFKMN-SQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYL 246 (355)
T ss_dssp EEEEEEEEEECS-SCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEE
T ss_pred ccceEEEEecCC-CCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEE
Confidence 345667777654 468899999988899999999776666754 355665552 333 36888888 45666 66
Q ss_pred EEEe-CCCcEEEEECC-CCeEEEEEec
Q 006229 613 ATSS-ADRTVRVWDTE-NVRKLTFICC 637 (655)
Q Consensus 613 aSgS-~DgtVrVWDl~-tg~~v~~l~~ 637 (655)
+.+| .+.++.|||.. +.+.+..|..
T Consensus 247 ivSsQG~~s~~Vydr~~~~~~vg~f~I 273 (355)
T 3amr_A 247 MASSQGNSSYAIYDRQGKNKYVADFRI 273 (355)
T ss_dssp EEEEGGGTEEEEEESSTTCCEEEEEEE
T ss_pred EEEcCCCCEEEEEECCCCCcEEEEEEe
Confidence 6666 67899999997 6777777753
No 267
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=90.54 E-value=2.4 Score=45.70 Aligned_cols=77 Identities=10% Similarity=0.140 Sum_probs=47.0
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCC---Cc-EEEEeCCCCeE-EEEecccCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECC
Q 006229 554 STSKVESCHFSPDGKLLATGGHD---KK-AVLWCTESFTV-KSTLEEHTQWITDVRFSP-SLSRLATSSADRTVRVWDTE 627 (655)
Q Consensus 554 H~~~V~sl~fSpdG~lLaSgs~D---gt-VrIWDl~t~~~-l~tl~gH~~~ItsVafsP-dg~~LaSgS~DgtVrVWDl~ 627 (655)
......+|+|+++|+++++.... .. +...+...+.. ...+. .-.....++++| ++.++++-..++.|+.+|..
T Consensus 180 ~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~ 258 (433)
T 4hw6_A 180 NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPA 258 (433)
T ss_dssp CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTT
T ss_pred CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECC
Confidence 34568899999999955554321 22 22233222111 11121 234456788999 67777776678899999998
Q ss_pred CCeE
Q 006229 628 NVRK 631 (655)
Q Consensus 628 tg~~ 631 (655)
++..
T Consensus 259 ~g~~ 262 (433)
T 4hw6_A 259 TGTL 262 (433)
T ss_dssp TCCE
T ss_pred CCeE
Confidence 7766
No 268
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=90.33 E-value=1.6 Score=49.31 Aligned_cols=74 Identities=12% Similarity=0.127 Sum_probs=51.6
Q ss_pred CeeEEEEcCCCCEEEEEeC-CCcEEEEeCCCCeEEEEecccCCC-EEEEEEcCCCCEEEEEe-CC-----CcEEEEECCC
Q 006229 557 KVESCHFSPDGKLLATGGH-DKKAVLWCTESFTVKSTLEEHTQW-ITDVRFSPSLSRLATSS-AD-----RTVRVWDTEN 628 (655)
Q Consensus 557 ~V~sl~fSpdG~lLaSgs~-DgtVrIWDl~t~~~l~tl~gH~~~-ItsVafsPdg~~LaSgS-~D-----gtVrVWDl~t 628 (655)
...++++..++++++.|+. +..+.+||..+.+-...-.-+... -.++++.++++.++.|+ .| ..+.+||..+
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp SSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred ccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 3446788899999999985 468999998876543322222222 23455667899999998 45 4699999987
Q ss_pred Ce
Q 006229 629 VR 630 (655)
Q Consensus 629 g~ 630 (655)
.+
T Consensus 324 ~~ 325 (656)
T 1k3i_A 324 KT 325 (656)
T ss_dssp TE
T ss_pred Cc
Confidence 65
No 269
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=90.10 E-value=10 Score=39.27 Aligned_cols=72 Identities=10% Similarity=-0.014 Sum_probs=49.2
Q ss_pred CeeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEE-EEeCC-CcEEEEECCC
Q 006229 557 KVESCHFSPD-GKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLA-TSSAD-RTVRVWDTEN 628 (655)
Q Consensus 557 ~V~sl~fSpd-G~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~La-SgS~D-gtVrVWDl~t 628 (655)
....+++++. ++++++-...+.|.+.+++.......+...-.....|+++|.+.+|+ |-..+ +.|...+++.
T Consensus 117 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG 191 (349)
T 3v64_C 117 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG 191 (349)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCC
Confidence 4568889874 55666666678999999876544434444445678999999665544 44444 7788888764
No 270
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=89.82 E-value=5.2 Score=40.26 Aligned_cols=99 Identities=8% Similarity=0.093 Sum_probs=59.0
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE---EEEec------ccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 006229 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFTV---KSTLE------EHTQWITDVRFSPSLSRLATSSADRTVRVWDTE 627 (655)
Q Consensus 557 ~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~---l~tl~------gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~ 627 (655)
....|++.+++.++++.-.+..+.++++..... +.... .+....-.|+|+|.+..|+++.......||.++
T Consensus 71 D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 71 DLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp SEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred ChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 466788888888777766677888888754332 22221 234456899999999888887765555555554
Q ss_pred ---CCeEEEEEecc--cceeeeeceeeEEEecC
Q 006229 628 ---NVRKLTFICCY--KCIFVSTAIGSCFFAPT 655 (655)
Q Consensus 628 ---tg~~v~~l~~~--~~~v~s~~Vss~~F~P~ 655 (655)
....+..+... ........+++++|+|.
T Consensus 151 g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~ 183 (255)
T 3qqz_A 151 GLLSSNELHISKDKALQRQFTLDDVSGAEFNQQ 183 (255)
T ss_dssp STTCSSCCEEEECHHHHHTCCSSCCCEEEEETT
T ss_pred ccccCCceeeecchhhccccccCCceeEEEcCC
Confidence 11122222210 01112335688888874
No 271
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=89.42 E-value=19 Score=37.80 Aligned_cols=73 Identities=8% Similarity=-0.024 Sum_probs=49.2
Q ss_pred CeeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEe-CC-CcEEEEECCCC
Q 006229 557 KVESCHFSPD-GKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSS-AD-RTVRVWDTENV 629 (655)
Q Consensus 557 ~V~sl~fSpd-G~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS-~D-gtVrVWDl~tg 629 (655)
....+++++. ++++++-...+.|.+.+++.......+...-.....|+++|.+.+|+.+. .+ +.|...++...
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~ 235 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS 235 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC
Confidence 4567888874 55556666678899988876544434444446678999999766555444 44 67888888643
No 272
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=89.14 E-value=7.3 Score=39.04 Aligned_cols=74 Identities=20% Similarity=0.243 Sum_probs=47.7
Q ss_pred CCeeEEEEcCCCCEEEEEeCC-C-cEEEEeCCCCeEEEEec-ccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q 006229 556 SKVESCHFSPDGKLLATGGHD-K-KAVLWCTESFTVKSTLE-EHTQWITDVRFSPSLSRLATSSADRTVRVWDTENV 629 (655)
Q Consensus 556 ~~V~sl~fSpdG~lLaSgs~D-g-tVrIWDl~t~~~l~tl~-gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg 629 (655)
..+.+++|+++|+++++.... + .|..+|..+++...... ........+++.+++..+++-+.++.|.++|..++
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 357889999999976665433 2 46667877776543322 12233455665665555666556889999998765
No 273
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=89.07 E-value=21 Score=36.13 Aligned_cols=73 Identities=7% Similarity=-0.064 Sum_probs=49.7
Q ss_pred CCeeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCC--CcEEEEECCC
Q 006229 556 SKVESCHFSPD-GKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSAD--RTVRVWDTEN 628 (655)
Q Consensus 556 ~~V~sl~fSpd-G~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~D--gtVrVWDl~t 628 (655)
.....+++++. ++++++-..++.|.+.|++.......+...-.....|+++|.+.+|+.+..+ +.|...++..
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG 152 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 152 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC
Confidence 34578899874 4555665677899999987654443344344567899999976665555443 6788888763
No 274
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=88.06 E-value=6.7 Score=45.09 Aligned_cols=77 Identities=13% Similarity=0.022 Sum_probs=57.8
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecc--------cCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 006229 555 TSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEE--------HTQWITDVRFSPSLSRLATSSADRTVRVWDT 626 (655)
Q Consensus 555 ~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~g--------H~~~ItsVafsPdg~~LaSgS~DgtVrVWDl 626 (655)
...|.++...++|.+ ..|..++-|.+||..+++....... ....|.+++.+++++.|..|+.++-|.+||.
T Consensus 356 ~~~V~~i~~d~~g~l-WiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNL-WIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp CSSEEEEEECTTSCE-EEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred CCeeEEEEECCCCCE-EEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeC
Confidence 356999999988874 4577777899999887765443221 2467999999998886777888788999999
Q ss_pred CCCeEE
Q 006229 627 ENVRKL 632 (655)
Q Consensus 627 ~tg~~v 632 (655)
.+++..
T Consensus 435 ~~~~~~ 440 (795)
T 4a2l_A 435 NSGQVE 440 (795)
T ss_dssp TTCCEE
T ss_pred CCCcEE
Confidence 877643
No 275
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=88.04 E-value=0.32 Score=48.66 Aligned_cols=66 Identities=14% Similarity=0.107 Sum_probs=44.9
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE------EEEe--cccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 006229 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFTV------KSTL--EEHTQWITDVRFSPSLSRLATSSADRTVRVWDTE 627 (655)
Q Consensus 557 ~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~------l~tl--~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~ 627 (655)
.+.+++|+|+|.+.+. .++.+.-.+..+... -..+ .+-.. ..+|.|+|+|.+.++ .||.|.-|+--
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 6779999999997777 667766666544211 1111 01222 578999999998888 56999888763
No 276
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=87.66 E-value=25 Score=36.24 Aligned_cols=74 Identities=8% Similarity=0.056 Sum_probs=48.2
Q ss_pred CCeeEEEEcCCCC-EEEEEeCC-CcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEE-eCCCcEEEEECCCC
Q 006229 556 SKVESCHFSPDGK-LLATGGHD-KKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATS-SADRTVRVWDTENV 629 (655)
Q Consensus 556 ~~V~sl~fSpdG~-lLaSgs~D-gtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSg-S~DgtVrVWDl~tg 629 (655)
.....++++|.+. ++++-..+ +.|...+++.......+...-..-+.|+|+|++..|+-+ +..++|..+|+...
T Consensus 159 ~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 159 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 4568899998555 55554444 778888886543332223234457899999876665544 45678999998743
No 277
>1uuj_A Platelet-activating factor acetylhydrolase IB ALP subunit; mitosis, neuroge cytoskeleton, cell division, microtubule; 1.75A {Mus musculus} SCOP: a.221.1.1
Probab=86.77 E-value=0.29 Score=41.60 Aligned_cols=38 Identities=18% Similarity=0.288 Sum_probs=31.1
Q ss_pred CccchHHHHHHHHHHHHHHhcChHHHHHHHHHhcCCCCC
Q 006229 3 QNNWEADKMLDVYIYDYLLKRKLHASAKAFQTEGKVSTD 41 (655)
Q Consensus 3 ~~~~~~~~~L~~yIydyl~k~~~~~tA~~f~~e~~~~~~ 41 (655)
-+.+.+ .-||.-|++||..+|+.+++.+|.+|.+++.+
T Consensus 5 Lt~rQ~-eEL~kaI~~YL~~~~~~~~~~alr~e~~~~~~ 42 (88)
T 1uuj_A 5 LSQRQR-DELNRAIADYLRSNGYEEAYSVFKKEAELDMN 42 (88)
T ss_dssp CCHHHH-HHHHHHHHHHHHHTTCHHHHHHHHHHTTCCCC
T ss_pred CCHHHH-HHHHHHHHHHHHhcCcHHHHHHHHHHhcCCCC
Confidence 344443 35899999999999999999999999987754
No 278
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=86.76 E-value=7 Score=40.58 Aligned_cols=71 Identities=13% Similarity=0.097 Sum_probs=46.4
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE--EEEec---ccCCCEEEEEEcCC---CCEEEEE-eCC-----CcE
Q 006229 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFTV--KSTLE---EHTQWITDVRFSPS---LSRLATS-SAD-----RTV 621 (655)
Q Consensus 556 ~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~--l~tl~---gH~~~ItsVafsPd---g~~LaSg-S~D-----gtV 621 (655)
..-..++|.|||+++++ ..++.|++++ +++. +..+. ........|+|+|+ +.+|+.+ +.+ ..|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 34578999999996655 5569999998 4442 22221 22456889999998 4444443 332 578
Q ss_pred EEEECCCC
Q 006229 622 RVWDTENV 629 (655)
Q Consensus 622 rVWDl~tg 629 (655)
..|++..+
T Consensus 108 ~r~~~~~~ 115 (352)
T 2ism_A 108 VRLRHLGE 115 (352)
T ss_dssp EEEEECSS
T ss_pred EEEEeCCC
Confidence 88887754
No 279
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=86.76 E-value=13 Score=42.60 Aligned_cols=76 Identities=8% Similarity=0.007 Sum_probs=56.3
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEec----ccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCe
Q 006229 555 TSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLE----EHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVR 630 (655)
Q Consensus 555 ~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~----gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~ 630 (655)
...|.+++..++|++|..|..++-|.+||..+++...... -+...|.++...++|.+.+.. .+ -|.+||..+++
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~ 482 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQRS 482 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTTE
T ss_pred CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCCe
Confidence 3569999999999867778887889999998876554322 235679999999888765554 34 58889988765
Q ss_pred EE
Q 006229 631 KL 632 (655)
Q Consensus 631 ~v 632 (655)
..
T Consensus 483 ~~ 484 (795)
T 4a2l_A 483 FT 484 (795)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 280
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=85.66 E-value=5.9 Score=41.33 Aligned_cols=72 Identities=15% Similarity=0.048 Sum_probs=46.3
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCe-EEEEec---ccCCCEEEEEEcCC---CCEE-EEEeC---C----Cc
Q 006229 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFT-VKSTLE---EHTQWITDVRFSPS---LSRL-ATSSA---D----RT 620 (655)
Q Consensus 556 ~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~-~l~tl~---gH~~~ItsVafsPd---g~~L-aSgS~---D----gt 620 (655)
..-..++|.|||+++++ ..++.|+++|. +++ .+..+. ........|+|+|+ +.+| ++-+. + ..
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 44678999999985555 55699999874 454 222221 22356889999997 4444 44332 3 56
Q ss_pred EEEEECCCC
Q 006229 621 VRVWDTENV 629 (655)
Q Consensus 621 VrVWDl~tg 629 (655)
|..|++...
T Consensus 107 v~r~~~~~~ 115 (354)
T 3a9g_A 107 VIRGRLDGS 115 (354)
T ss_dssp EEEEEECSS
T ss_pred EEEEEECCC
Confidence 777887654
No 281
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=85.35 E-value=7.9 Score=40.76 Aligned_cols=76 Identities=11% Similarity=0.032 Sum_probs=50.0
Q ss_pred CCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE--EEEe----cccCCCEEEEEEcCC---CCEE-EEE--eCCCc
Q 006229 553 ASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTV--KSTL----EEHTQWITDVRFSPS---LSRL-ATS--SADRT 620 (655)
Q Consensus 553 gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~--l~tl----~gH~~~ItsVafsPd---g~~L-aSg--S~Dgt 620 (655)
.--..-..++|.|||++|++--..+.|++++..+++. +..+ .........|+|+|+ +.+| ++= ..+..
T Consensus 29 ~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 29 TGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred cCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 3345567999999999888776689999998766553 2222 123556899999995 3444 332 24556
Q ss_pred EEEEECCC
Q 006229 621 VRVWDTEN 628 (655)
Q Consensus 621 VrVWDl~t 628 (655)
|.-|.+..
T Consensus 109 v~R~~~~~ 116 (347)
T 3das_A 109 IVRMLYDE 116 (347)
T ss_dssp EEEEEBCT
T ss_pred EEEEEeCC
Confidence 66666654
No 282
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=85.03 E-value=6.9 Score=42.51 Aligned_cols=53 Identities=21% Similarity=0.211 Sum_probs=36.5
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE--EEEecc------cCCCEEEEEEcCC
Q 006229 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFTV--KSTLEE------HTQWITDVRFSPS 608 (655)
Q Consensus 556 ~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~--l~tl~g------H~~~ItsVafsPd 608 (655)
.....++|.|||+++++-...+.|++++..+++. +..+.. ....+..|+|+|+
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 3567999999999887765545788888665543 223321 2456779999995
No 283
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=84.51 E-value=6.3 Score=41.64 Aligned_cols=111 Identities=12% Similarity=0.126 Sum_probs=65.3
Q ss_pred CCCcEEEEecCCCCCCCCccccccccCCC-ceeeeEEeecCCC-CCeeEEEEcCCCCEEEEEeC---C------------
Q 006229 514 LDDNVESFLSPDDADPRDRVGRSAEVGKG-FTFTEFQLIPAST-SKVESCHFSPDGKLLATGGH---D------------ 576 (655)
Q Consensus 514 ~D~tV~vW~s~d~~d~~d~~~~l~d~~~~-~t~~~v~~l~gH~-~~V~sl~fSpdG~lLaSgs~---D------------ 576 (655)
.|+++++|.+.... ....+.+++.... .....+..+.+.. ...+++++.++|++.++... |
T Consensus 123 ~dg~~~L~Vvnh~~--~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~ 200 (355)
T 3sre_A 123 DDNTVYLLVVNHPG--SSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGL 200 (355)
T ss_dssp TTCCEEEEEEECST--TCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTC
T ss_pred CCCcEEEEEEECCC--CCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccC
Confidence 36677777554432 1223333333322 2334455555432 35789999999998777652 1
Q ss_pred CcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEe-CCCcEEEEECC
Q 006229 577 KKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSS-ADRTVRVWDTE 627 (655)
Q Consensus 577 gtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS-~DgtVrVWDl~ 627 (655)
..-+||.++.+++. .+...-..-+.|+|+||+++|+.+. ..++|.+||+.
T Consensus 201 ~~g~vyr~d~~~~~-~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 201 AWSFVTYYSPNDVR-VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp CCEEEEEECTTCCE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred CccEEEEEECCeEE-EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 23445544444333 2333344678999999998766655 57889999986
No 284
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=84.33 E-value=1.3 Score=50.17 Aligned_cols=71 Identities=11% Similarity=0.249 Sum_probs=52.0
Q ss_pred EEEEcC-CCCEEEEEeCCC-----------cEEEEeCCCCeE--EEEe-cccCCCEEEEEEcCCCCEEEEEeC-CCcEEE
Q 006229 560 SCHFSP-DGKLLATGGHDK-----------KAVLWCTESFTV--KSTL-EEHTQWITDVRFSPSLSRLATSSA-DRTVRV 623 (655)
Q Consensus 560 sl~fSp-dG~lLaSgs~Dg-----------tVrIWDl~t~~~--l~tl-~gH~~~ItsVafsPdg~~LaSgS~-DgtVrV 623 (655)
++++.+ ++++++.|+.+. .+.+||..+.+- +..+ ..+...+.++++..+++.++.|+. +..|.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 566777 899999988654 588999887642 2233 234555667888899999999985 557999
Q ss_pred EECCCCe
Q 006229 624 WDTENVR 630 (655)
Q Consensus 624 WDl~tg~ 630 (655)
||..+.+
T Consensus 270 yd~~t~~ 276 (656)
T 1k3i_A 270 YDSSSDS 276 (656)
T ss_dssp EEGGGTE
T ss_pred ecCcCCc
Confidence 9987654
No 285
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=84.00 E-value=35 Score=35.63 Aligned_cols=74 Identities=7% Similarity=0.024 Sum_probs=48.3
Q ss_pred CCeeEEEEcCCCCEEEEE-eCC-CcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEE-eCCCcEEEEECCCC
Q 006229 556 SKVESCHFSPDGKLLATG-GHD-KKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATS-SADRTVRVWDTENV 629 (655)
Q Consensus 556 ~~V~sl~fSpdG~lLaSg-s~D-gtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSg-S~DgtVrVWDl~tg 629 (655)
.....|+++|++.+|+.+ ..+ +.|...+++.......+...-..-+.|+|+|++..|+.+ +..+.|..+|+...
T Consensus 202 ~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 202 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 278 (386)
T ss_dssp SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred CCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 456889999865544444 344 678888887543333333334457899999876655544 45678999998743
No 286
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=83.48 E-value=4.3 Score=43.60 Aligned_cols=71 Identities=11% Similarity=0.186 Sum_probs=51.4
Q ss_pred CeeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEec-ccCCCEEEEEEcCCCCEE-EEEeCCCcEEEEECC
Q 006229 557 KVESCHFSP-DGKLLATGGHDKKAVLWCTESFTVKSTLE-EHTQWITDVRFSPSLSRL-ATSSADRTVRVWDTE 627 (655)
Q Consensus 557 ~V~sl~fSp-dG~lLaSgs~DgtVrIWDl~t~~~l~tl~-gH~~~ItsVafsPdg~~L-aSgS~DgtVrVWDl~ 627 (655)
....++++| +|.++++-..++.|..+|..++.....+. +....-+.|+|+|++++| ++-...++|.++|..
T Consensus 227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 356788999 78777777778899999998776532222 222456789999999954 555567889998765
No 287
>2xtc_A F-box-like/WD repeat-containing protein TBL1X; transcription; 2.22A {Homo sapiens} PDB: 2xte_A 2xtd_A
Probab=83.46 E-value=0.74 Score=39.24 Aligned_cols=32 Identities=25% Similarity=0.424 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHhcCCCCCC
Q 006229 11 MLDVYIYDYLLKRKLHASAKAFQTEGKVSTDP 42 (655)
Q Consensus 11 ~L~~yIydyl~k~~~~~tA~~f~~e~~~~~~~ 42 (655)
-+|--||-||...|+..||-+|.+|++|...+
T Consensus 7 evN~LI~RYLqEsGf~hsAf~f~~Es~i~~~~ 38 (90)
T 2xtc_A 7 EVNFLVYRYLQESGFSHSAFTFGIESHISQSN 38 (90)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTTGGGSC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHhcCCccc
Confidence 58989999999999999999999999986543
No 288
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=82.84 E-value=50 Score=34.66 Aligned_cols=75 Identities=8% Similarity=-0.016 Sum_probs=52.3
Q ss_pred CCCeeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEe-C-CCcEEEEECCCC
Q 006229 555 TSKVESCHFSP-DGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSS-A-DRTVRVWDTENV 629 (655)
Q Consensus 555 ~~~V~sl~fSp-dG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS-~-DgtVrVWDl~tg 629 (655)
......+++.+ .++++++-...+.|.+.|++.......+...-.....|+++|.+.+|+-.. . .+.|...++...
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~ 235 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 235 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC
Confidence 34567889988 555666666778999999986655544544455688999999766655544 2 367888888643
No 289
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=82.71 E-value=15 Score=37.39 Aligned_cols=80 Identities=11% Similarity=0.218 Sum_probs=53.4
Q ss_pred CceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeC--CCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCC
Q 006229 542 GFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCT--ESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADR 619 (655)
Q Consensus 542 ~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl--~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~Dg 619 (655)
+.++..+.. .+...+.++.|++++.+++.+.....++-+|- .+.+.+. .++...+.+|.+.+++..+ .++.+|
T Consensus 151 G~tW~~~~~--~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G 225 (327)
T 2xbg_A 151 GKNWQALVQ--EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGG 225 (327)
T ss_dssp TSSEEEEEC--SCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTT
T ss_pred CCCCEEeec--CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEE-EEeCCc
Confidence 344554432 44567899999999998887766555555663 3444442 2456789999999988755 455678
Q ss_pred cEEEEEC
Q 006229 620 TVRVWDT 626 (655)
Q Consensus 620 tVrVWDl 626 (655)
.|++++.
T Consensus 226 ~~~~s~~ 232 (327)
T 2xbg_A 226 KIAFSDP 232 (327)
T ss_dssp EEEEEET
T ss_pred eEEEecC
Confidence 8887753
No 290
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.62 E-value=10 Score=45.17 Aligned_cols=39 Identities=21% Similarity=0.152 Sum_probs=34.6
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEec
Q 006229 599 WITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICC 637 (655)
Q Consensus 599 ~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~ 637 (655)
.|.+++..++..+|+|-|.|+++||||+.++.|+.+...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 577788888889999999999999999999999988653
No 291
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=81.80 E-value=44 Score=34.95 Aligned_cols=62 Identities=15% Similarity=0.070 Sum_probs=35.1
Q ss_pred CCCeeEEEEcCC----CCEEEEEe--CCCcEEEEeCCC----------CeEE-EEec-ccCCCEEEEEEcCCCCEEEEEe
Q 006229 555 TSKVESCHFSPD----GKLLATGG--HDKKAVLWCTES----------FTVK-STLE-EHTQWITDVRFSPSLSRLATSS 616 (655)
Q Consensus 555 ~~~V~sl~fSpd----G~lLaSgs--~DgtVrIWDl~t----------~~~l-~tl~-gH~~~ItsVafsPdg~~LaSgS 616 (655)
......|+|+|| +.+.++-+ .+..|.-|.+.. .+.+ ..+. +....-..|.|.|||.++++.+
T Consensus 79 ~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 79 EGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp TBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred CCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 356789999995 44433322 344455555443 1222 2222 2223456799999998887765
No 292
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=81.78 E-value=36 Score=34.63 Aligned_cols=72 Identities=8% Similarity=-0.027 Sum_probs=49.2
Q ss_pred CeeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEe--CCCcEEEEECCC
Q 006229 557 KVESCHFSP-DGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSS--ADRTVRVWDTEN 628 (655)
Q Consensus 557 ~V~sl~fSp-dG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS--~DgtVrVWDl~t 628 (655)
....+++.+ .++++++-...+.|.+++++.......+.........|+++|.+.+|+-+. ..+.|...+++.
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG 154 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG 154 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC
Confidence 456788887 555666666778999999876443333334455678999999766655554 256788888763
No 293
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=81.76 E-value=31 Score=38.79 Aligned_cols=76 Identities=11% Similarity=0.038 Sum_probs=54.4
Q ss_pred EEEEcCCCCEEEEEeCC----------------CcEEEEeCCCCeEEEEecc--cCC--------CEEEEEEc-CCC---
Q 006229 560 SCHFSPDGKLLATGGHD----------------KKAVLWCTESFTVKSTLEE--HTQ--------WITDVRFS-PSL--- 609 (655)
Q Consensus 560 sl~fSpdG~lLaSgs~D----------------gtVrIWDl~t~~~l~tl~g--H~~--------~ItsVafs-Pdg--- 609 (655)
...+.++..+++.+..+ ..|..+|.++|+.+-.+.. |.. .|. +... .+|
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~ 323 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKAR 323 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEE
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEE
Confidence 45666777777777655 3799999999998876653 321 121 2222 567
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEEe
Q 006229 610 SRLATSSADRTVRVWDTENVRKLTFIC 636 (655)
Q Consensus 610 ~~LaSgS~DgtVrVWDl~tg~~v~~l~ 636 (655)
..|+.++.+|.|.+.|.++|+.+..+.
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCcEEEEEECCCCCEeeccc
Confidence 568889999999999999999887665
No 294
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=81.29 E-value=5.4 Score=48.51 Aligned_cols=39 Identities=21% Similarity=0.152 Sum_probs=33.7
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEec
Q 006229 599 WITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICC 637 (655)
Q Consensus 599 ~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~ 637 (655)
.|.+++..++..+|+|-|.|+++||||+.++.|+.+...
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 456667778889999999999999999999999988653
No 295
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=80.52 E-value=10 Score=39.83 Aligned_cols=84 Identities=5% Similarity=0.053 Sum_probs=55.2
Q ss_pred CCCCCeeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeEEEE-ecc----cCC--CEEEEEE---cCCCCEEEEEe-----
Q 006229 553 ASTSKVESCHFSPD-GKLLATGGHDKKAVLWCTESFTVKST-LEE----HTQ--WITDVRF---SPSLSRLATSS----- 616 (655)
Q Consensus 553 gH~~~V~sl~fSpd-G~lLaSgs~DgtVrIWDl~t~~~l~t-l~g----H~~--~ItsVaf---sPdg~~LaSgS----- 616 (655)
...-.-.|++|++. ++++++.-..++|..||...+..... +.+ ... .+..|.| .|++++++...
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 33344568999884 44555544899999999986644333 332 111 3689999 68877777533
Q ss_pred --------CCCcEEEEECC---CCeEEEEEe
Q 006229 617 --------ADRTVRVWDTE---NVRKLTFIC 636 (655)
Q Consensus 617 --------~DgtVrVWDl~---tg~~v~~l~ 636 (655)
.+..|..+|+. +++.+..+.
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~d 120 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVN 120 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEE
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEec
Confidence 26789999999 776654443
No 296
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=80.15 E-value=24 Score=36.43 Aligned_cols=61 Identities=11% Similarity=0.001 Sum_probs=36.9
Q ss_pred CCeeEEEEcCC---CCEEEEE-eCC-----CcEEEEeCCCCe-----E-EEEec---ccCCCEEEEEEcCCCCEEEEEe
Q 006229 556 SKVESCHFSPD---GKLLATG-GHD-----KKAVLWCTESFT-----V-KSTLE---EHTQWITDVRFSPSLSRLATSS 616 (655)
Q Consensus 556 ~~V~sl~fSpd---G~lLaSg-s~D-----gtVrIWDl~t~~-----~-l~tl~---gH~~~ItsVafsPdg~~LaSgS 616 (655)
.....|+|+|| +.+|+.+ ..+ ..|..|+..... . +..+. +.......|+|.|+|.++++.+
T Consensus 75 ~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 75 SGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 45789999998 4444443 332 567777776431 1 22233 1112346899999998777654
No 297
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=79.54 E-value=8.5 Score=45.91 Aligned_cols=39 Identities=18% Similarity=0.066 Sum_probs=34.1
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEec
Q 006229 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLE 594 (655)
Q Consensus 556 ~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~ 594 (655)
..|.+++..++..+++|-+.|+++|||++.++.++.+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 357788888888999999999999999999999988753
No 298
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=77.79 E-value=1.1e+02 Score=35.54 Aligned_cols=76 Identities=8% Similarity=-0.062 Sum_probs=52.3
Q ss_pred CCCeeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeC-C-CcEEEEECCCCe
Q 006229 555 TSKVESCHFSPDGK-LLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSA-D-RTVRVWDTENVR 630 (655)
Q Consensus 555 ~~~V~sl~fSpdG~-lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~-D-gtVrVWDl~tg~ 630 (655)
......|++.+.++ ++++-...+.|.+.+++.......+...-.....|+++|.+.+|+-... + +.|.+.++....
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~ 548 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 548 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc
Confidence 34567899988664 5556667789999999865544444445556899999997666555443 3 678888886433
No 299
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=76.29 E-value=8.3 Score=40.10 Aligned_cols=70 Identities=19% Similarity=0.207 Sum_probs=43.3
Q ss_pred CeeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEec-------ccCCCEEEEEEcCC---CCEE-EEEeC-------
Q 006229 557 KVESCHFSPDGK-LLATGGHDKKAVLWCTESFTVKSTLE-------EHTQWITDVRFSPS---LSRL-ATSSA------- 617 (655)
Q Consensus 557 ~V~sl~fSpdG~-lLaSgs~DgtVrIWDl~t~~~l~tl~-------gH~~~ItsVafsPd---g~~L-aSgS~------- 617 (655)
.-..|+|.|||+ ++++ ..++.|++++.. +.....+. ........|+|+|+ +.+| ++-+.
T Consensus 19 ~P~~i~~~pdG~~l~V~-e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLIT-LRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SEEEEEECSTTCCEEEE-ETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CcEEEEEcCCCCEEEEE-eCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 467899999999 5554 567999999854 33221111 12345789999996 4444 44332
Q ss_pred CCcEEEEECCC
Q 006229 618 DRTVRVWDTEN 628 (655)
Q Consensus 618 DgtVrVWDl~t 628 (655)
...|..|++..
T Consensus 97 ~~~v~r~~~~~ 107 (353)
T 2g8s_A 97 GTAVGYGRLSD 107 (353)
T ss_dssp EEEEEEEEECT
T ss_pred eeEEEEEEECC
Confidence 23566666653
No 300
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=76.27 E-value=54 Score=39.99 Aligned_cols=77 Identities=8% Similarity=0.024 Sum_probs=53.1
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEe-cccCCCEEEEEEcCC------CCEEEEEeC-CCcEEEEECC
Q 006229 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTL-EEHTQWITDVRFSPS------LSRLATSSA-DRTVRVWDTE 627 (655)
Q Consensus 556 ~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl-~gH~~~ItsVafsPd------g~~LaSgS~-DgtVrVWDl~ 627 (655)
..|.+++.+ +.+++.++ ++.|.++.++.+...... ..-...|.|+++.|. +.+++.|.. |++|+|+++.
T Consensus 514 ~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~ 590 (1158)
T 3ei3_A 514 KNISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLP 590 (1158)
T ss_dssp CCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETT
T ss_pred CEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECC
Confidence 356666655 34666665 678888887765432211 124568999999863 469999997 9999999999
Q ss_pred CCeEEEEE
Q 006229 628 NVRKLTFI 635 (655)
Q Consensus 628 tg~~v~~l 635 (655)
+.+.+...
T Consensus 591 ~l~~~~~~ 598 (1158)
T 3ei3_A 591 SFELLHKE 598 (1158)
T ss_dssp TCCEEEEE
T ss_pred CCCeEEEE
Confidence 87766543
No 301
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=75.93 E-value=90 Score=33.54 Aligned_cols=63 Identities=11% Similarity=0.069 Sum_probs=35.7
Q ss_pred CCCeeEEEEcCC---CCEEEEEe-C------------CCcEEEEeCCCC-------eEEE-Eec-ccCCCEEEEEEcCCC
Q 006229 555 TSKVESCHFSPD---GKLLATGG-H------------DKKAVLWCTESF-------TVKS-TLE-EHTQWITDVRFSPSL 609 (655)
Q Consensus 555 ~~~V~sl~fSpd---G~lLaSgs-~------------DgtVrIWDl~t~-------~~l~-tl~-gH~~~ItsVafsPdg 609 (655)
...+..|+|+|| ..+|+.+. . ...|.-|++... +.+. .+. +.......|+|.|||
T Consensus 76 ~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG 155 (454)
T 1cru_A 76 QNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQ 155 (454)
T ss_dssp SCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTS
T ss_pred CCceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCC
Confidence 356779999995 44444433 2 124555554321 1121 122 223457899999999
Q ss_pred CEEEEEeC
Q 006229 610 SRLATSSA 617 (655)
Q Consensus 610 ~~LaSgS~ 617 (655)
.++++.+.
T Consensus 156 ~Lyv~~Gd 163 (454)
T 1cru_A 156 KIYYTIGD 163 (454)
T ss_dssp CEEEEECC
T ss_pred eEEEEECC
Confidence 98777654
No 302
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=75.70 E-value=26 Score=36.98 Aligned_cols=64 Identities=5% Similarity=0.050 Sum_probs=43.2
Q ss_pred CCcEEEEeC--CCCeEEEEecc------cC-CCEEEEEE--cCC-CC-EEEEEeCCCcEEEEECC-------CCeEEEEE
Q 006229 576 DKKAVLWCT--ESFTVKSTLEE------HT-QWITDVRF--SPS-LS-RLATSSADRTVRVWDTE-------NVRKLTFI 635 (655)
Q Consensus 576 DgtVrIWDl--~t~~~l~tl~g------H~-~~ItsVaf--sPd-g~-~LaSgS~DgtVrVWDl~-------tg~~v~~l 635 (655)
+.+|+||++ .+++ +..+.. .. ..+..+|+ +|. +. +++....+|.+..|++. +.+.+++|
T Consensus 98 ~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 578999976 3433 444421 22 56777888 774 44 68888899999999983 34667777
Q ss_pred ecccc
Q 006229 636 CCYKC 640 (655)
Q Consensus 636 ~~~~~ 640 (655)
.....
T Consensus 177 ~lgsq 181 (355)
T 3amr_A 177 KMNSQ 181 (355)
T ss_dssp ECSSC
T ss_pred cCCCC
Confidence 66543
No 303
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=74.93 E-value=86 Score=32.83 Aligned_cols=74 Identities=15% Similarity=0.084 Sum_probs=50.2
Q ss_pred CCeeEEEEcCCCCEEEEEe-C-CCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEe-CCCcEEEEECCCC
Q 006229 556 SKVESCHFSPDGKLLATGG-H-DKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSS-ADRTVRVWDTENV 629 (655)
Q Consensus 556 ~~V~sl~fSpdG~lLaSgs-~-DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS-~DgtVrVWDl~tg 629 (655)
.....|+++|.+.+|+... . ...|...+++.......+...-..-+.|+|++++..|+.+- ...+|...|++..
T Consensus 202 ~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 202 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp CCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 4578999999655544443 2 36888888875444333343445678999998777766654 4678999998754
No 304
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=74.92 E-value=99 Score=35.98 Aligned_cols=76 Identities=14% Similarity=0.084 Sum_probs=51.3
Q ss_pred CCCeeEEEEcCCCCEEEEEeC-C-CcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEe-CCCcEEEEECCCCe
Q 006229 555 TSKVESCHFSPDGKLLATGGH-D-KKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSS-ADRTVRVWDTENVR 630 (655)
Q Consensus 555 ~~~V~sl~fSpdG~lLaSgs~-D-gtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS-~DgtVrVWDl~tg~ 630 (655)
......|+++|.+.+|+.+.. + ..|.+.+++.......+...-...+.|++++.+.+|+.+- ....|.+.|+....
T Consensus 513 l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~ 591 (791)
T 3m0c_C 513 GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 591 (791)
T ss_dssp TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCc
Confidence 345789999997555554443 3 6788888876554444444446788999998776666554 45678888886443
No 305
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=74.66 E-value=28 Score=39.74 Aligned_cols=75 Identities=11% Similarity=-0.038 Sum_probs=52.5
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEec--ccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEE
Q 006229 555 TSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLE--EHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKL 632 (655)
Q Consensus 555 ~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~--gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v 632 (655)
...|.++...++|.+.+ |..++-|.++|..+++...... -....|.++...+++.+.+ |+. +-|.+||..+++..
T Consensus 406 ~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~ 482 (781)
T 3v9f_A 406 SNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVI 482 (781)
T ss_dssp CSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCC
T ss_pred CcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEE
Confidence 46799999988887544 6666778899988776543322 1356799999988876544 444 45888998776543
No 306
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=73.91 E-value=36 Score=38.84 Aligned_cols=74 Identities=9% Similarity=0.032 Sum_probs=49.7
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEeccc-----CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q 006229 555 TSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEH-----TQWITDVRFSPSLSRLATSSADRTVRVWDTENV 629 (655)
Q Consensus 555 ~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH-----~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg 629 (655)
...|.++...++|++.+ |.. +-|.+||..+++........ ...|++++..++|.+.+. +.++-|..||..++
T Consensus 449 ~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 449 LLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFGGGVGIYTPDMQ 525 (781)
T ss_dssp CCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESSSCEEEECTTCC
T ss_pred CCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEE-EcCCCEEEEeCCCC
Confidence 46799999988887544 444 56888998876554333222 467999999998876554 44334667888765
Q ss_pred eE
Q 006229 630 RK 631 (655)
Q Consensus 630 ~~ 631 (655)
+.
T Consensus 526 ~~ 527 (781)
T 3v9f_A 526 LV 527 (781)
T ss_dssp EE
T ss_pred eE
Confidence 43
No 307
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=73.67 E-value=22 Score=40.66 Aligned_cols=73 Identities=14% Similarity=0.078 Sum_probs=44.6
Q ss_pred CCeeEEEEcCCCCEEEEEe-CC-CcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCC
Q 006229 556 SKVESCHFSPDGKLLATGG-HD-KKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLS-RLATSSADRTVRVWDTEN 628 (655)
Q Consensus 556 ~~V~sl~fSpdG~lLaSgs-~D-gtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~-~LaSgS~DgtVrVWDl~t 628 (655)
.....|+++|++.+|+.+. .. +.|.+++++.......+...-..-+.|+|+|++. ++++-+..++|.++|+..
T Consensus 496 ~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 496 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 3456789998655444433 22 6788777764332222222234457899998755 455555677899999864
No 308
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=73.60 E-value=55 Score=33.81 Aligned_cols=61 Identities=8% Similarity=0.048 Sum_probs=36.1
Q ss_pred CCeeEEEEcCC----CCEEEEEeC---C----CcEEEEeCCCC-------eEE-EEec-ccCCCEEEEEEcCCCCEEEEE
Q 006229 556 SKVESCHFSPD----GKLLATGGH---D----KKAVLWCTESF-------TVK-STLE-EHTQWITDVRFSPSLSRLATS 615 (655)
Q Consensus 556 ~~V~sl~fSpd----G~lLaSgs~---D----gtVrIWDl~t~-------~~l-~tl~-gH~~~ItsVafsPdg~~LaSg 615 (655)
.....|+|+|+ +.+.++-+. + ..|..|+.... +.+ ..+. +.......|+|.|||.++++.
T Consensus 73 ~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 73 AGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITT 152 (354)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEEC
T ss_pred CceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEE
Confidence 45788999997 444444332 3 56777776543 111 1122 112234679999999877775
Q ss_pred e
Q 006229 616 S 616 (655)
Q Consensus 616 S 616 (655)
+
T Consensus 153 G 153 (354)
T 3a9g_A 153 G 153 (354)
T ss_dssp C
T ss_pred C
Confidence 4
No 309
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=73.59 E-value=7 Score=42.00 Aligned_cols=71 Identities=13% Similarity=0.131 Sum_probs=50.1
Q ss_pred CeeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEec--ccCCCEEEEEEcCCCCEE-EEEeCCCcEEEEECC
Q 006229 557 KVESCHFSP-DGKLLATGGHDKKAVLWCTESFTVKSTLE--EHTQWITDVRFSPSLSRL-ATSSADRTVRVWDTE 627 (655)
Q Consensus 557 ~V~sl~fSp-dG~lLaSgs~DgtVrIWDl~t~~~l~tl~--gH~~~ItsVafsPdg~~L-aSgS~DgtVrVWDl~ 627 (655)
....+++++ +|.++++-..++.|+.+|..++.....+. +....-..|+|+|++++| ++-...++|+.+|..
T Consensus 229 ~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 229 GAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp SBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 346788999 77777776677899999998776633332 222334579999999954 455567889998865
No 310
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=71.05 E-value=34 Score=38.00 Aligned_cols=70 Identities=6% Similarity=-0.020 Sum_probs=47.7
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEec--ccCC--CEEE-EEEcCCCCEEEEEeC------CCcEEEEECCCCeEEEEE
Q 006229 567 GKLLATGGHDKKAVLWCTESFTVKSTLE--EHTQ--WITD-VRFSPSLSRLATSSA------DRTVRVWDTENVRKLTFI 635 (655)
Q Consensus 567 G~lLaSgs~DgtVrIWDl~t~~~l~tl~--gH~~--~Its-VafsPdg~~LaSgS~------DgtVrVWDl~tg~~v~~l 635 (655)
+..|+.++.|+.|..+|..+|+.+-.+. ++.. .+++ ..+. + ..|+.++. |+.|..+|+++|+.+-.+
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-K-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-T-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-C-CEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 5577888899999999999998876554 2111 2221 1111 3 45555554 899999999999988776
Q ss_pred ecc
Q 006229 636 CCY 638 (655)
Q Consensus 636 ~~~ 638 (655)
...
T Consensus 193 ~~~ 195 (571)
T 2ad6_A 193 FAT 195 (571)
T ss_dssp ESS
T ss_pred ccC
Confidence 653
No 311
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=70.95 E-value=93 Score=31.49 Aligned_cols=73 Identities=5% Similarity=0.018 Sum_probs=47.1
Q ss_pred CCeeEEEEcCCCCEEEEEe--CCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEE-eCCCcEEEEECCC
Q 006229 556 SKVESCHFSPDGKLLATGG--HDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATS-SADRTVRVWDTEN 628 (655)
Q Consensus 556 ~~V~sl~fSpdG~lLaSgs--~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSg-S~DgtVrVWDl~t 628 (655)
.....|+++|.+.+|+.+. ..+.|...+++.......+...-..-+.|+|+|++..|+-+ +..+.|..+|++.
T Consensus 122 ~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 122 DQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp SSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence 4567899998655555444 35778888876433222222233456899999976665554 4567899999874
No 312
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=70.72 E-value=91 Score=31.25 Aligned_cols=73 Identities=15% Similarity=0.106 Sum_probs=48.0
Q ss_pred CCeeEEEEcCCCCEEEEEeCC--CcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEe-CCCcEEEEECCC
Q 006229 556 SKVESCHFSPDGKLLATGGHD--KKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSS-ADRTVRVWDTEN 628 (655)
Q Consensus 556 ~~V~sl~fSpdG~lLaSgs~D--gtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS-~DgtVrVWDl~t 628 (655)
.....++++|++..|+.+... +.|...+++...........-...+.|+|+|++..|+.+. ..++|.++|+..
T Consensus 120 ~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 120 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 456899999866555444443 6788888764332222233345678999999776665544 567899999874
No 313
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=69.14 E-value=27 Score=35.50 Aligned_cols=68 Identities=15% Similarity=0.014 Sum_probs=41.8
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcE-EEEeCCCCeEE-EEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 006229 555 TSKVESCHFSPDGKLLATGGHDKKA-VLWCTESFTVK-STLEEHTQWITDVRFSPSLSRLATSSADRTVRVWD 625 (655)
Q Consensus 555 ~~~V~sl~fSpdG~lLaSgs~DgtV-rIWDl~t~~~l-~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWD 625 (655)
...+.+|.+.+++++++.+. ++.| +-+| .++.- ....++...+.++++.+++.+++.+...+.++-+|
T Consensus 121 ~~~~~~i~~~~~~~~~~~~~-~g~v~~S~D--gG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d 190 (327)
T 2xbg_A 121 PGSPRLIKALGNGSAEMITN-VGAIYRTKD--SGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWE 190 (327)
T ss_dssp SSCEEEEEEEETTEEEEEET-TCCEEEESS--TTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEEC
T ss_pred CCCeEEEEEECCCCEEEEeC-CccEEEEcC--CCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeC
Confidence 34577888877777766654 5544 3333 23221 12235667899999999998887775544444444
No 314
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=67.40 E-value=7.5 Score=47.27 Aligned_cols=39 Identities=18% Similarity=0.066 Sum_probs=33.4
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEec
Q 006229 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLE 594 (655)
Q Consensus 556 ~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~ 594 (655)
..|.+++..++.++|++-+.|+++|||++.++.|+.+..
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred ceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 356677778888999999999999999999999887753
No 315
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=66.61 E-value=40 Score=38.55 Aligned_cols=80 Identities=6% Similarity=-0.097 Sum_probs=51.2
Q ss_pred CeeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEec--ccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEE
Q 006229 557 KVESCHFSPDGK-LLATGGHDKKAVLWCTESFTVKSTLE--EHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLT 633 (655)
Q Consensus 557 ~V~sl~fSpdG~-lLaSgs~DgtVrIWDl~t~~~l~tl~--gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~ 633 (655)
.-..|+|++++. ++++-...+.|.++|++.......+. +.......|++..+ .++++....+.|.++|..+++.+.
T Consensus 541 ~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEE
T ss_pred CccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceE
Confidence 345799998654 55555567889999987543332322 11223345555543 455566667899999998888777
Q ss_pred EEec
Q 006229 634 FICC 637 (655)
Q Consensus 634 ~l~~ 637 (655)
.+..
T Consensus 620 ~i~~ 623 (699)
T 1n7d_A 620 LLAE 623 (699)
T ss_dssp CCCT
T ss_pred Eeec
Confidence 6643
No 316
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=66.36 E-value=8.1 Score=44.67 Aligned_cols=37 Identities=14% Similarity=0.157 Sum_probs=31.8
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEec
Q 006229 599 WITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICC 637 (655)
Q Consensus 599 ~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~ 637 (655)
.|.|+.+ +..+|+|-|.|+++|+||++++.|+.+...
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4666655 378999999999999999999999988776
No 317
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=66.08 E-value=69 Score=31.28 Aligned_cols=63 Identities=10% Similarity=0.155 Sum_probs=38.5
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCeEEEE--ecccCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCe
Q 006229 566 DGKLLATGGHD-----KKAVLWCTESFTVKST--LEEHTQWITDVRFSPSLSRLATSSAD-----RTVRVWDTENVR 630 (655)
Q Consensus 566 dG~lLaSgs~D-----gtVrIWDl~t~~~l~t--l~gH~~~ItsVafsPdg~~LaSgS~D-----gtVrVWDl~tg~ 630 (655)
++++++.|+.+ ..|.+||+.+.+-... +........++.+ +++.++.|+.+ ..|.+||+++.+
T Consensus 206 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 206 NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 67788888875 4688999987643322 2111112223333 57777777765 358899998754
No 318
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=65.56 E-value=13 Score=41.09 Aligned_cols=70 Identities=10% Similarity=0.050 Sum_probs=48.1
Q ss_pred eeEEEEcC-CCCEEEEEeCCCcEEEEeCC-------CCeE-----------EEEe--cccCCCEEEEEEcCCCCE-EEEE
Q 006229 558 VESCHFSP-DGKLLATGGHDKKAVLWCTE-------SFTV-----------KSTL--EEHTQWITDVRFSPSLSR-LATS 615 (655)
Q Consensus 558 V~sl~fSp-dG~lLaSgs~DgtVrIWDl~-------t~~~-----------l~tl--~gH~~~ItsVafsPdg~~-LaSg 615 (655)
...++++| ++.++++-..++.|..+|+. ++.. +..+ .+....-+.|+|+|+|++ +++-
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD 328 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGV 328 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEe
Confidence 35778899 56667777788889999987 5543 1121 123345689999999995 4454
Q ss_pred eCCCcEEEEECC
Q 006229 616 SADRTVRVWDTE 627 (655)
Q Consensus 616 S~DgtVrVWDl~ 627 (655)
+..+.|+.+|..
T Consensus 329 ~~~h~I~kid~d 340 (496)
T 3kya_A 329 INNHYFMRSDYD 340 (496)
T ss_dssp TTTTEEEEEEEE
T ss_pred CCCCEEEEEecC
Confidence 567789996653
No 319
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=63.74 E-value=39 Score=37.64 Aligned_cols=79 Identities=15% Similarity=0.076 Sum_probs=56.3
Q ss_pred eEEEEcCCCCEEEEEeC--------------------C----CcEEEEeCCCCeEEEEec--ccCC--------CEEEEE
Q 006229 559 ESCHFSPDGKLLATGGH--------------------D----KKAVLWCTESFTVKSTLE--EHTQ--------WITDVR 604 (655)
Q Consensus 559 ~sl~fSpdG~lLaSgs~--------------------D----gtVrIWDl~t~~~l~tl~--gH~~--------~ItsVa 604 (655)
...+++++..+++.+.. | +.|..+|.++|+.+-.+. .|.. .|. +.
T Consensus 249 ~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~ 327 (582)
T 1flg_A 249 QSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FD 327 (582)
T ss_dssp SCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EE
T ss_pred CCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Ee
Confidence 35677787777776653 2 589999999999887764 2321 121 22
Q ss_pred Ec-CCCC---EEEEEeCCCcEEEEECCCCeEEEEEecc
Q 006229 605 FS-PSLS---RLATSSADRTVRVWDTENVRKLTFICCY 638 (655)
Q Consensus 605 fs-Pdg~---~LaSgS~DgtVrVWDl~tg~~v~~l~~~ 638 (655)
.. .+|+ .|+.++.||.|+++|.++|+.+-.+...
T Consensus 328 ~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~ 365 (582)
T 1flg_A 328 YKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFV 365 (582)
T ss_dssp EECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESS
T ss_pred eecCCCCEEEEEEEECCCceEEEEECCCCCEecccccc
Confidence 22 4674 7889999999999999999998776554
No 320
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=63.14 E-value=12 Score=39.35 Aligned_cols=118 Identities=9% Similarity=-0.051 Sum_probs=66.9
Q ss_pred CcEEEeccCCCcEEEEecCCCCCCCCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEE-eCCCcEEEEeC
Q 006229 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATG-GHDKKAVLWCT 584 (655)
Q Consensus 506 ~~~LasGS~D~tV~vW~s~d~~d~~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSg-s~DgtVrIWDl 584 (655)
+.+|..++.|+.|.-++..+++ ..|..... .........+... ..++..++.. ..||.|..+|.
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~-------~~W~~~~~-~~~p~~~~~~~~~-------~~~~~~~vv~p~~dG~l~a~~~ 74 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGH-------IIWSIEPE-NFQPLIEIQEPSR-------LETYETLIIEPFGDGNIYYFNA 74 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTE-------EEEEECGG-GSCCSEECCCSCT-------TTSSEEEEECCSTTTEEEEEET
T ss_pred CCEEEEEeCCCeEEEEECCCCc-------EEEEecCC-ccCCcEEecCCcc-------ccCCcEEEEEECCCCEEEEEEC
Confidence 3678888899999888776663 23332221 0001111111110 0133333333 57899988888
Q ss_pred CCCeEEEEecc----cCCCEEE----EEEc----CCCCEEEEEeCCCcEEEEECCCCeEEEEEecc
Q 006229 585 ESFTVKSTLEE----HTQWITD----VRFS----PSLSRLATSSADRTVRVWDTENVRKLTFICCY 638 (655)
Q Consensus 585 ~t~~~l~tl~g----H~~~Its----Vafs----Pdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~ 638 (655)
.+|...-.+.- ...++.. |... ..+..+++|+.++++.--|+++|+.+..+...
T Consensus 75 ~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 75 HQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp TTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred CCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 88755433321 1112221 0000 14668899999999999999999999888654
No 321
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=60.77 E-value=50 Score=32.41 Aligned_cols=63 Identities=14% Similarity=0.184 Sum_probs=37.9
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCeEEE--EecccCCCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCe
Q 006229 566 DGKLLATGGHD-----KKAVLWCTESFTVKS--TLEEHTQWITDVRFSPSLSRLATSSADR-----TVRVWDTENVR 630 (655)
Q Consensus 566 dG~lLaSgs~D-----gtVrIWDl~t~~~l~--tl~gH~~~ItsVafsPdg~~LaSgS~Dg-----tVrVWDl~tg~ 630 (655)
++++++.|+.+ ..|.+||+.+.+-.. .+........++.+ ++..++.|+.++ .|.+||+.+.+
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 67888888765 368899988754322 22111111122222 567777777654 48999998764
No 322
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=59.24 E-value=1.1e+02 Score=30.14 Aligned_cols=63 Identities=11% Similarity=0.203 Sum_probs=37.1
Q ss_pred CCCEEEEEeCCC-----cEEEEeCCCCeEEE--EecccCCCEEEEEEcCCCCEEEEEeCCC--------------cEEEE
Q 006229 566 DGKLLATGGHDK-----KAVLWCTESFTVKS--TLEEHTQWITDVRFSPSLSRLATSSADR--------------TVRVW 624 (655)
Q Consensus 566 dG~lLaSgs~Dg-----tVrIWDl~t~~~l~--tl~gH~~~ItsVafsPdg~~LaSgS~Dg--------------tVrVW 624 (655)
++++++.|+.++ .+.+||+.+.+-.. .+........++.+ +++.++.|+.++ .|.+|
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~y 273 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRY 273 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEe
Confidence 678888888765 47788987764222 22111111222333 567777777642 37788
Q ss_pred ECCCCe
Q 006229 625 DTENVR 630 (655)
Q Consensus 625 Dl~tg~ 630 (655)
|+.+.+
T Consensus 274 d~~~~~ 279 (315)
T 4asc_A 274 NEEEKK 279 (315)
T ss_dssp ETTTTE
T ss_pred cCCCCh
Confidence 988764
No 323
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=59.18 E-value=43 Score=36.87 Aligned_cols=70 Identities=10% Similarity=0.032 Sum_probs=44.4
Q ss_pred CeeEEEE-------cCCCCEEEEEeCCC-------cEEEEeCCC-CeEE-----EEecccCCCEEEEEEcCC-CCEEEEE
Q 006229 557 KVESCHF-------SPDGKLLATGGHDK-------KAVLWCTES-FTVK-----STLEEHTQWITDVRFSPS-LSRLATS 615 (655)
Q Consensus 557 ~V~sl~f-------SpdG~lLaSgs~Dg-------tVrIWDl~t-~~~l-----~tl~gH~~~ItsVafsPd-g~~LaSg 615 (655)
....|+| +++|.+|+.+.... .|.+.+... +... ..+... .....++++|+ +.++++-
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd 265 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNS 265 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEE
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEE
Confidence 5789999 99999666665543 255665433 1211 122211 23467788994 5556666
Q ss_pred eCCCcEEEEECC
Q 006229 616 SADRTVRVWDTE 627 (655)
Q Consensus 616 S~DgtVrVWDl~ 627 (655)
..++.|.++|+.
T Consensus 266 ~~~g~V~r~d~~ 277 (496)
T 3kya_A 266 YEKGQVFRLDLV 277 (496)
T ss_dssp TTTTEEEEECHH
T ss_pred CCCCEEEEEecc
Confidence 678889999987
No 324
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=56.35 E-value=1.9e+02 Score=35.20 Aligned_cols=72 Identities=17% Similarity=0.092 Sum_probs=50.2
Q ss_pred CCCeeEEEEcCC------CCEEEEEeC-CCcEEEEeCCCCeEEEEec-ccCCCEEEEEEcC--CCCEEEEEeCCCcEEEE
Q 006229 555 TSKVESCHFSPD------GKLLATGGH-DKKAVLWCTESFTVKSTLE-EHTQWITDVRFSP--SLSRLATSSADRTVRVW 624 (655)
Q Consensus 555 ~~~V~sl~fSpd------G~lLaSgs~-DgtVrIWDl~t~~~l~tl~-gH~~~ItsVafsP--dg~~LaSgS~DgtVrVW 624 (655)
...|.|+++.+. +.+++.|.+ |++|+|+.+.+.+.+.... +-+....+|++.. ...+|..|-.||.+..+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 457999999863 469999997 9999999999877665432 1123444554432 33578888899987555
Q ss_pred EC
Q 006229 625 DT 626 (655)
Q Consensus 625 Dl 626 (655)
.+
T Consensus 633 ~~ 634 (1158)
T 3ei3_A 633 GL 634 (1158)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 325
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=55.42 E-value=31 Score=38.93 Aligned_cols=57 Identities=16% Similarity=0.188 Sum_probs=42.2
Q ss_pred eEEEEcCCCCEEEEEeCC------------CcEEEEeCCCCeEEEEeccc-CCCEEEEEEcCCCCEEEEE
Q 006229 559 ESCHFSPDGKLLATGGHD------------KKAVLWCTESFTVKSTLEEH-TQWITDVRFSPSLSRLATS 615 (655)
Q Consensus 559 ~sl~fSpdG~lLaSgs~D------------gtVrIWDl~t~~~l~tl~gH-~~~ItsVafsPdg~~LaSg 615 (655)
=-|.|+++|+++++-..+ ..+.+.+..+++..+.+.++ ..+++.++|+||+++|+..
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 457899999977665432 23455566778887777665 4679999999999988876
No 326
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=54.05 E-value=1.1e+02 Score=29.63 Aligned_cols=63 Identities=10% Similarity=0.090 Sum_probs=37.8
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCeEEEE--ecccCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCe
Q 006229 566 DGKLLATGGHD-----KKAVLWCTESFTVKST--LEEHTQWITDVRFSPSLSRLATSSAD-----RTVRVWDTENVR 630 (655)
Q Consensus 566 dG~lLaSgs~D-----gtVrIWDl~t~~~l~t--l~gH~~~ItsVafsPdg~~LaSgS~D-----gtVrVWDl~tg~ 630 (655)
++++++.|+.+ ..|.+||+.+.+-... +........++.+ ++..++.|+.+ ..|.+||+.+.+
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 67888888765 4588899877643322 2111111222333 56777777764 368999998654
No 327
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=53.25 E-value=2.6e+02 Score=30.64 Aligned_cols=45 Identities=7% Similarity=-0.016 Sum_probs=33.5
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEEeccccee
Q 006229 598 QWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTFICCYKCIF 642 (655)
Q Consensus 598 ~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~l~~~~~~v 642 (655)
+.-.++..++.-..++.-+.-|.|.++|+.++.|+..-+-....+
T Consensus 259 DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~i 303 (494)
T 1bpo_A 259 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETI 303 (494)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred CceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCce
Confidence 334456666666778888899999999999999997765444433
No 328
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=49.95 E-value=93 Score=34.93 Aligned_cols=74 Identities=7% Similarity=0.020 Sum_probs=50.9
Q ss_pred CCeeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCC
Q 006229 556 SKVESCHFSP-DGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLS-RLATSSADRTVRVWDTENV 629 (655)
Q Consensus 556 ~~V~sl~fSp-dG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~-~LaSgS~DgtVrVWDl~tg 629 (655)
..+..|+|++ +++++++-...+.|+.++++.......+...-.....|++++.+. ++++-+..++|.+.++...
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~ 424 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGT 424 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCC
Confidence 3477899998 455555555678899999876544334443345677899987544 5555556788999998754
No 329
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=48.88 E-value=1.1e+02 Score=30.25 Aligned_cols=63 Identities=14% Similarity=0.120 Sum_probs=37.8
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCeEEE--EecccCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCe
Q 006229 566 DGKLLATGGHD-----KKAVLWCTESFTVKS--TLEEHTQWITDVRFSPSLSRLATSSAD-----RTVRVWDTENVR 630 (655)
Q Consensus 566 dG~lLaSgs~D-----gtVrIWDl~t~~~l~--tl~gH~~~ItsVafsPdg~~LaSgS~D-----gtVrVWDl~tg~ 630 (655)
++++++.|+.+ ..|.+||+.+.+-.. .+........++.+ +++.++.|+.+ ..|.+||+.+.+
T Consensus 215 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 215 HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 67788888775 568899988764322 12111112222222 56777777754 357889988754
No 330
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=48.71 E-value=21 Score=41.21 Aligned_cols=36 Identities=17% Similarity=0.270 Sum_probs=29.6
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEec
Q 006229 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLE 594 (655)
Q Consensus 557 ~V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~ 594 (655)
.|.|+.+ +..+|++-+.|+++|+||++++.++.+..
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 3555555 47799999999999999999999887764
No 331
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=48.64 E-value=1.3e+02 Score=29.46 Aligned_cols=63 Identities=13% Similarity=0.107 Sum_probs=36.4
Q ss_pred CCCEEEEEeCC------CcEEEEeCCCCeEEE--EecccCCCEEEEEEcCCCCEEEEEeC---------CCcEEEEECCC
Q 006229 566 DGKLLATGGHD------KKAVLWCTESFTVKS--TLEEHTQWITDVRFSPSLSRLATSSA---------DRTVRVWDTEN 628 (655)
Q Consensus 566 dG~lLaSgs~D------gtVrIWDl~t~~~l~--tl~gH~~~ItsVafsPdg~~LaSgS~---------DgtVrVWDl~t 628 (655)
++++++.|+.+ ..+.+||+.+.+-.. .+........++.+ +++.++.|+. -..|.+||+.+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 67788888876 458889988764322 22111111122222 5666666654 23488999886
Q ss_pred Ce
Q 006229 629 VR 630 (655)
Q Consensus 629 g~ 630 (655)
.+
T Consensus 179 ~~ 180 (306)
T 3ii7_A 179 ET 180 (306)
T ss_dssp TE
T ss_pred Ce
Confidence 53
No 332
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=47.35 E-value=1.4e+02 Score=29.22 Aligned_cols=63 Identities=10% Similarity=0.048 Sum_probs=38.3
Q ss_pred CCCEEEEEeCC----CcEEEEeCCCCeEE--EEecccCCCEEEEEEcCCCCEEEEEeCC------CcEEEEECCCCe
Q 006229 566 DGKLLATGGHD----KKAVLWCTESFTVK--STLEEHTQWITDVRFSPSLSRLATSSAD------RTVRVWDTENVR 630 (655)
Q Consensus 566 dG~lLaSgs~D----gtVrIWDl~t~~~l--~tl~gH~~~ItsVafsPdg~~LaSgS~D------gtVrVWDl~tg~ 630 (655)
++++++.|+.+ ..+.+||+.+.+-. ..+........++.+ ++..++.|+.+ ..+.+||+.+.+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 129 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTES 129 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCc
Confidence 67788888865 56888898876432 222211111222222 56777777765 458899988754
No 333
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=44.44 E-value=71 Score=36.01 Aligned_cols=60 Identities=13% Similarity=0.146 Sum_probs=42.9
Q ss_pred CeeEEEEcCCCCEEEEEeC------------CCcEEEEeCCCCeEEEEeccc-CCCEEEEEEcCCCCEEEEEe
Q 006229 557 KVESCHFSPDGKLLATGGH------------DKKAVLWCTESFTVKSTLEEH-TQWITDVRFSPSLSRLATSS 616 (655)
Q Consensus 557 ~V~sl~fSpdG~lLaSgs~------------DgtVrIWDl~t~~~l~tl~gH-~~~ItsVafsPdg~~LaSgS 616 (655)
....|.|+++|.+.++... ...|..++..++++...+.+. ...++.++|+||+++|+.+-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 4567999999997663221 114566677778877666543 46799999999999887765
No 334
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=43.66 E-value=60 Score=34.04 Aligned_cols=79 Identities=15% Similarity=0.232 Sum_probs=50.0
Q ss_pred CeeEEEEcCCCCEEEEEe-CCCcEEEEeCCC-CeE--EEEecccCCCEEEEEEcC-CCCEEEEEeCCC-cEEEEECC--C
Q 006229 557 KVESCHFSPDGKLLATGG-HDKKAVLWCTES-FTV--KSTLEEHTQWITDVRFSP-SLSRLATSSADR-TVRVWDTE--N 628 (655)
Q Consensus 557 ~V~sl~fSpdG~lLaSgs-~DgtVrIWDl~t-~~~--l~tl~gH~~~ItsVafsP-dg~~LaSgS~Dg-tVrVWDl~--t 628 (655)
.-+.|+||||++.|+.+. ..+.|..||++. ++. ...+ ......-.+++++ +|++.+++..++ .|..||.. .
T Consensus 222 ~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~~~~ 300 (355)
T 3sre_A 222 FANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAENPP 300 (355)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTTSCC
T ss_pred ccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceEEEEECCCCCC
Confidence 356899999998776664 568899999863 322 2344 2345567788999 598888776543 34444443 2
Q ss_pred CeEEEEEe
Q 006229 629 VRKLTFIC 636 (655)
Q Consensus 629 g~~v~~l~ 636 (655)
++.+..+.
T Consensus 301 ~s~v~rI~ 308 (355)
T 3sre_A 301 GSEVLRIQ 308 (355)
T ss_dssp CEEEEEEE
T ss_pred CCEEEEEE
Confidence 44444443
No 335
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=43.38 E-value=2.2e+02 Score=27.96 Aligned_cols=64 Identities=13% Similarity=0.157 Sum_probs=36.4
Q ss_pred CCCEEEEEeCCC-----cEEEEeCCCCeE--EEEecccCCCEEEEEEcCCCCEEEEEeCC--------------CcEEEE
Q 006229 566 DGKLLATGGHDK-----KAVLWCTESFTV--KSTLEEHTQWITDVRFSPSLSRLATSSAD--------------RTVRVW 624 (655)
Q Consensus 566 dG~lLaSgs~Dg-----tVrIWDl~t~~~--l~tl~gH~~~ItsVafsPdg~~LaSgS~D--------------gtVrVW 624 (655)
++++++.|+.+. .|.+||+.+.+- +..+........++.+ +++.++.|+.+ ..|.+|
T Consensus 206 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~y 283 (318)
T 2woz_A 206 KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL--AGSLYAIGGFAMIQLESKEFAPTEVNDIWKY 283 (318)
T ss_dssp TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE--TTEEEEECCBCCBC----CCBCCBCCCEEEE
T ss_pred CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEE--CCEEEEECCeeccCCCCceeccceeeeEEEE
Confidence 678888887643 466888876532 2222211112222322 46777777654 358889
Q ss_pred ECCCCeE
Q 006229 625 DTENVRK 631 (655)
Q Consensus 625 Dl~tg~~ 631 (655)
|+.+.+=
T Consensus 284 d~~~~~W 290 (318)
T 2woz_A 284 EDDKKEW 290 (318)
T ss_dssp ETTTTEE
T ss_pred eCCCCEe
Confidence 9987643
No 336
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=41.95 E-value=1.5e+02 Score=28.78 Aligned_cols=63 Identities=17% Similarity=0.143 Sum_probs=35.4
Q ss_pred CCCEEEEEeCCC-----cEEEEeCCCCeEEE--EecccCCCEEEEEEcCCCCEEEEEeCC-------CcEEEEECCCCe
Q 006229 566 DGKLLATGGHDK-----KAVLWCTESFTVKS--TLEEHTQWITDVRFSPSLSRLATSSAD-------RTVRVWDTENVR 630 (655)
Q Consensus 566 dG~lLaSgs~Dg-----tVrIWDl~t~~~l~--tl~gH~~~ItsVafsPdg~~LaSgS~D-------gtVrVWDl~tg~ 630 (655)
++++++.|+.++ .+.+||+.+.+-.. .+........++.+ +++.++.|+.+ ..|.+||+.+.+
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~ 184 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNE 184 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCc
Confidence 678888888664 47788887654322 22211111222222 56666666643 348889987653
No 337
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=41.21 E-value=74 Score=31.62 Aligned_cols=63 Identities=14% Similarity=0.024 Sum_probs=42.6
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE-------EEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEE
Q 006229 558 VESCHFSPDGKLLATGGHDKKAVLWCTESFTV-------KSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVW 624 (655)
Q Consensus 558 V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~-------l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVW 624 (655)
-.++.|.++|.+.++ .|+.|.-|+-.+... ...-.+-=..+.+|.|+|+|.+.+.. |+.++-+
T Consensus 90 F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~ 159 (236)
T 1tl2_A 90 FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKA 159 (236)
T ss_dssp CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEE
T ss_pred ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEec
Confidence 468999999998887 569888887643211 11111122568999999999887777 7775433
No 338
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=40.71 E-value=4.2e+02 Score=29.51 Aligned_cols=79 Identities=6% Similarity=-0.109 Sum_probs=52.7
Q ss_pred CCeeEEEEcCCCCEEEEE-eCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q 006229 556 SKVESCHFSPDGKLLATG-GHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENVRKLTF 634 (655)
Q Consensus 556 ~~V~sl~fSpdG~lLaSg-s~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~tg~~v~~ 634 (655)
.....|++++++..|+.+ ...+.|...|++.... ..+.........|++.. +..++|-...+.|...|..+++....
T Consensus 166 ~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~ 243 (628)
T 4a0p_A 166 GRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTI 243 (628)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred CCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEE
Confidence 456789999976655554 4567899999876443 34444444556788765 45555655678899999877765555
Q ss_pred Ee
Q 006229 635 IC 636 (655)
Q Consensus 635 l~ 636 (655)
+.
T Consensus 244 l~ 245 (628)
T 4a0p_A 244 IQ 245 (628)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 339
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=40.58 E-value=46 Score=37.58 Aligned_cols=69 Identities=19% Similarity=0.261 Sum_probs=48.7
Q ss_pred eEEEEcCCCCEEEEEe-CCCcEEEEeCCCC------eE-------EEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEE
Q 006229 559 ESCHFSPDGKLLATGG-HDKKAVLWCTESF------TV-------KSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVW 624 (655)
Q Consensus 559 ~sl~fSpdG~lLaSgs-~DgtVrIWDl~t~------~~-------l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVW 624 (655)
-.|.++|||++++.++ .+.+|.|+|++.. +. ....+ -.-.-...+|+++|.-..|.--|..|-.|
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvkW 404 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVKW 404 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEEE
Confidence 3688999999877765 5889999998742 11 11222 22345678999999545555579999999
Q ss_pred ECCC
Q 006229 625 DTEN 628 (655)
Q Consensus 625 Dl~t 628 (655)
++..
T Consensus 405 ni~~ 408 (638)
T 3sbq_A 405 NMEE 408 (638)
T ss_dssp EHHH
T ss_pred eccH
Confidence 9975
No 340
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=40.40 E-value=4.3e+02 Score=29.47 Aligned_cols=73 Identities=5% Similarity=-0.084 Sum_probs=47.4
Q ss_pred CeeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeC--CCcEEEEECCCC
Q 006229 557 KVESCHFSPDG-KLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSA--DRTVRVWDTENV 629 (655)
Q Consensus 557 ~V~sl~fSpdG-~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~--DgtVrVWDl~tg 629 (655)
....|++++.+ +++++-...+.|.+.+++.......+...-..-..|+++|...+|+-... .+.|...++...
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~ 156 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS 156 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC
Confidence 45678888754 45566566788999998765433333344456789999996555554442 457777777643
No 341
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=39.74 E-value=1.4e+02 Score=29.30 Aligned_cols=63 Identities=19% Similarity=0.183 Sum_probs=37.3
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCeEEE--EecccCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCe
Q 006229 566 DGKLLATGGHD-----KKAVLWCTESFTVKS--TLEEHTQWITDVRFSPSLSRLATSSAD-----RTVRVWDTENVR 630 (655)
Q Consensus 566 dG~lLaSgs~D-----gtVrIWDl~t~~~l~--tl~gH~~~ItsVafsPdg~~LaSgS~D-----gtVrVWDl~tg~ 630 (655)
++++++.|+.+ ..+.+||+.+.+-.. .+........++.+ ++..++.|+.+ ..|.+||+.+.+
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 67788888765 458888987654221 12111111223333 56777777764 458999987653
No 342
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=39.50 E-value=1.7e+02 Score=30.90 Aligned_cols=70 Identities=10% Similarity=-0.137 Sum_probs=48.4
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 006229 558 VESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTE 627 (655)
Q Consensus 558 V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~ 627 (655)
-.++..|+.-.+++.-..-|.|.++|++|+.++..-+--.+.|..-+-+.+..-++....+|.|.--.++
T Consensus 262 PVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~ 331 (365)
T 2xzh_A 262 PVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 331 (365)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEEC
T ss_pred eEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEEC
Confidence 3467777766688888889999999999999997766556666655555544455555566655444443
No 343
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=39.04 E-value=70 Score=34.72 Aligned_cols=52 Identities=13% Similarity=0.097 Sum_probs=33.8
Q ss_pred CeeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCe---EEEEec-----c----cCCCEEEEEEcCC
Q 006229 557 KVESCHFSPDGK-LLATGGHDKKAVLWCTESFT---VKSTLE-----E----HTQWITDVRFSPS 608 (655)
Q Consensus 557 ~V~sl~fSpdG~-lLaSgs~DgtVrIWDl~t~~---~l~tl~-----g----H~~~ItsVafsPd 608 (655)
.-..++|.|||. .|+++...+.|++++..... .+..+. + .......|+|+|+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 356899999995 34445678999999754321 222221 1 1456789999996
No 344
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=33.38 E-value=2.8e+02 Score=30.43 Aligned_cols=70 Identities=10% Similarity=-0.137 Sum_probs=50.0
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 006229 558 VESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTE 627 (655)
Q Consensus 558 V~sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~ 627 (655)
-.++..|+.-.+++.-..-|.|.++|++|+.++..-+--.+.|..-+-+.+..-++....+|.|.--.++
T Consensus 261 Pvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~ 330 (494)
T 1bpo_A 261 PVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 330 (494)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEEC
T ss_pred eeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEc
Confidence 4577888877788888899999999999999997766556666665555555555555566655544443
No 345
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=33.38 E-value=3.9e+02 Score=28.15 Aligned_cols=78 Identities=17% Similarity=0.192 Sum_probs=54.0
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC-CeEEEEEecc
Q 006229 560 SCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTEN-VRKLTFICCY 638 (655)
Q Consensus 560 sl~fSpdG~lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~DgtVrVWDl~t-g~~v~~l~~~ 638 (655)
+...+|..+.||.-. .+++.|+|+++...++.+.- ...|.-=+|-.+ +.|+-.+ +..|.-|++.. ...+..|.-|
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~-~~L~lVT-~taVyHWs~~~~s~P~kvFdR~ 146 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRH 146 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSS-SEEEEEE-SSEEEEEESSTTCCCEEEEECC
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCC-CeEEEEc-CCcEEEEcccCCCCCceeeecc
Confidence 455688888777766 68899999999988877763 456666667543 4555544 44899999974 3455666666
Q ss_pred cce
Q 006229 639 KCI 641 (655)
Q Consensus 639 ~~~ 641 (655)
...
T Consensus 147 ~~L 149 (365)
T 2xzh_A 147 SSL 149 (365)
T ss_dssp GGG
T ss_pred hhc
Confidence 554
No 346
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=32.77 E-value=2.4e+02 Score=27.53 Aligned_cols=63 Identities=10% Similarity=0.180 Sum_probs=36.7
Q ss_pred CCCCEEEEEeC-C-----CcEEEEeCCCCeEE--EEecccCCCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC
Q 006229 565 PDGKLLATGGH-D-----KKAVLWCTESFTVK--STLEEHTQWITDVRFSPSLSRLATSSADR-----TVRVWDTENV 629 (655)
Q Consensus 565 pdG~lLaSgs~-D-----gtVrIWDl~t~~~l--~tl~gH~~~ItsVafsPdg~~LaSgS~Dg-----tVrVWDl~tg 629 (655)
-++++++.|+. + ..+.+||+.+.+=. ..+........++.+ +++.++.|+.++ .|.+||+.+.
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCC
Confidence 36778888876 2 46888998775322 222111111222222 567777777654 4888898764
No 347
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=32.46 E-value=5.6e+02 Score=28.44 Aligned_cols=72 Identities=8% Similarity=-0.049 Sum_probs=47.7
Q ss_pred CCeeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeC--CCcEEEEECC
Q 006229 556 SKVESCHFSPDGK-LLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSA--DRTVRVWDTE 627 (655)
Q Consensus 556 ~~V~sl~fSpdG~-lLaSgs~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~--DgtVrVWDl~ 627 (655)
.....+++++.+. ++++-...+.|.+.+++.......+.+.-..-..|+++|.+.+|+-... .+.|...+++
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d 158 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD 158 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC
Confidence 4577899998555 5555566789999998765443333344556778999997665554443 3566666665
No 348
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=28.84 E-value=2.4e+02 Score=28.80 Aligned_cols=60 Identities=23% Similarity=0.254 Sum_probs=41.8
Q ss_pred CCeeEEEEcC-------CCCEEEEEeCCCcEEEEeCCCCeEEEE---ecccCCCEEEEEEcCCCCEEEEE
Q 006229 556 SKVESCHFSP-------DGKLLATGGHDKKAVLWCTESFTVKST---LEEHTQWITDVRFSPSLSRLATS 615 (655)
Q Consensus 556 ~~V~sl~fSp-------dG~lLaSgs~DgtVrIWDl~t~~~l~t---l~gH~~~ItsVafsPdg~~LaSg 615 (655)
..+..+.|.. +|.++++.-..+.|...+++.++.+.. +.+-...+..|++.|||.++++.
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence 4677888864 577777777778888888776654322 22334579999999999866643
No 349
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=27.73 E-value=3.2e+02 Score=27.07 Aligned_cols=51 Identities=12% Similarity=0.068 Sum_probs=28.5
Q ss_pred CCCEEEEEeC-C---------CcEEEEeCCCCeEEE--Eec-ccCCCEEEEEEcCCCCEEEEEeCC
Q 006229 566 DGKLLATGGH-D---------KKAVLWCTESFTVKS--TLE-EHTQWITDVRFSPSLSRLATSSAD 618 (655)
Q Consensus 566 dG~lLaSgs~-D---------gtVrIWDl~t~~~l~--tl~-gH~~~ItsVafsPdg~~LaSgS~D 618 (655)
++++++.|+. + ..|.+||+.+.+=.. .+. .-.....++. .+++.++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 5777777776 2 468888987754221 111 1111122222 467778888765
No 350
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=23.88 E-value=3.5e+02 Score=28.50 Aligned_cols=79 Identities=6% Similarity=0.003 Sum_probs=53.0
Q ss_pred CeeEEEEcCCCC-EEEEEeC--------------CCcEEEEeCCCC--eEEEEecc------cCCCEEEEEEc---CC--
Q 006229 557 KVESCHFSPDGK-LLATGGH--------------DKKAVLWCTESF--TVKSTLEE------HTQWITDVRFS---PS-- 608 (655)
Q Consensus 557 ~V~sl~fSpdG~-lLaSgs~--------------DgtVrIWDl~t~--~~l~tl~g------H~~~ItsVafs---Pd-- 608 (655)
.|..+...++++ |++=.|. --+|.+||+.+. +.++++.= ....+.+|++. |.
T Consensus 88 sV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~ 167 (381)
T 3q6k_A 88 SIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGD 167 (381)
T ss_dssp CEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTT
T ss_pred EeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCC
Confidence 466777777666 3333331 125889999999 88877742 23568888888 32
Q ss_pred --CCEEE-EEeCCCcEEEEECCCCeEEEEE
Q 006229 609 --LSRLA-TSSADRTVRVWDTENVRKLTFI 635 (655)
Q Consensus 609 --g~~La-SgS~DgtVrVWDl~tg~~v~~l 635 (655)
+.++. |=+.+.-|.|+|+.+++..+.+
T Consensus 168 c~~~~aYItD~~~~gLIVydl~~~~swRv~ 197 (381)
T 3q6k_A 168 CSETFVYITNFLRGALFIYDHKKQDSWNVT 197 (381)
T ss_dssp SCSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCccEEEEEcCCCCcEEEEECCCCcEEEEc
Confidence 23433 3345778999999999888766
No 351
>1qb3_A Cyclin-dependent kinases regulatory subunit; cell cycle mutagenesis domain swapping, cyclin-dependent KIN cycle; 3.00A {Saccharomyces cerevisiae} SCOP: d.97.1.1
Probab=23.78 E-value=21 Score=32.82 Aligned_cols=11 Identities=27% Similarity=0.193 Sum_probs=4.6
Q ss_pred hHHHHHHHHHh
Q 006229 25 LHASAKAFQTE 35 (655)
Q Consensus 25 ~~~tA~~f~~e 35 (655)
+.+.-++-+.|
T Consensus 13 l~d~er~~l~~ 23 (150)
T 1qb3_A 13 LTDQERARVLE 23 (150)
T ss_dssp CCHHHHHHHGG
T ss_pred chHHHHHHHHH
Confidence 33444444443
No 352
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=23.07 E-value=4.1e+02 Score=29.95 Aligned_cols=70 Identities=13% Similarity=0.069 Sum_probs=39.7
Q ss_pred EEEEcCC-CCEEEEEeCC-------CcEEEEeCCCCe--------EEEEecccC-CCEEEEEEcCCCCEEEEEeCC----
Q 006229 560 SCHFSPD-GKLLATGGHD-------KKAVLWCTESFT--------VKSTLEEHT-QWITDVRFSPSLSRLATSSAD---- 618 (655)
Q Consensus 560 sl~fSpd-G~lLaSgs~D-------gtVrIWDl~t~~--------~l~tl~gH~-~~ItsVafsPdg~~LaSgS~D---- 618 (655)
++.+..+ +++++.||.+ ..|.+||+.+.. .+....... ....++ ...++..++.|+.+
T Consensus 543 a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~-~~~~~~iyv~GG~~~~~~ 621 (695)
T 2zwa_A 543 GLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIK-YITPRKLLIVGGTSPSGL 621 (695)
T ss_dssp EEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEE-EEETTEEEEECCBCSSCC
T ss_pred EEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEE-EeCCCEEEEECCccCCCC
Confidence 4555654 7788888762 358888987765 112211111 112223 23336777777743
Q ss_pred ----CcEEEEECCCCe
Q 006229 619 ----RTVRVWDTENVR 630 (655)
Q Consensus 619 ----gtVrVWDl~tg~ 630 (655)
..|.+||+.+.+
T Consensus 622 ~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 622 FDRTNSIISLDPLSET 637 (695)
T ss_dssp CCTTTSEEEEETTTTE
T ss_pred CCCCCeEEEEECCCCe
Confidence 358999998754
No 353
>2d68_A FOP, FGFR1OP; alpha helical bundle, dimer, cell cycle; 1.60A {Homo sapiens}
Probab=22.77 E-value=78 Score=26.30 Aligned_cols=31 Identities=16% Similarity=0.258 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHhcCCCC
Q 006229 10 KMLDVYIYDYLLKRKLHASAKAFQTEGKVST 40 (655)
Q Consensus 10 ~~L~~yIydyl~k~~~~~tA~~f~~e~~~~~ 40 (655)
.+++.-|-|||.-++|.=|..-|.-|++++.
T Consensus 19 rLi~~LVrEyLef~~l~~TlsVf~pEs~l~~ 49 (82)
T 2d68_A 19 RLVASLVAEFLQFFNLDFTLAVFQPETSTLQ 49 (82)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHHHcCCcchHHhhhhccCCCC
Confidence 3678899999999999999999999999874
No 354
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=22.11 E-value=3.7e+02 Score=30.37 Aligned_cols=115 Identities=18% Similarity=0.075 Sum_probs=65.0
Q ss_pred cEEEeccCCCcEEEEecCCCCCC-CCccccccccCCCceeeeEEeecCCCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 006229 507 RFVDDGSLDDNVESFLSPDDADP-RDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTE 585 (655)
Q Consensus 507 ~~LasGS~D~tV~vW~s~d~~d~-~d~~~~l~d~~~~~t~~~v~~l~gH~~~V~sl~fSpdG~lLaSgs~DgtVrIWDl~ 585 (655)
.++++|-.+.+|.+++...-.+. .+ ++.+..+. .+.... -.-.-...+|.++|....|---|..|..|++.
T Consensus 336 yi~v~GKLsptvtV~d~~k~~~~~~~---k~~~~~~~----~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~ 407 (638)
T 3sbq_A 336 YFIAAGKLSPTCSMIAIDKLPDLFAG---KLADPRDV----IVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVKWNME 407 (638)
T ss_dssp EEEEECTTSSBEEEEEGGGHHHHHTT---CCSCGGGG----EEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred EEEEcCCCCCeEEEEEeehhhhhhhc---cccCcccc----eEeecc-CCCcccEEEECCCCceEeeeeecceEEEEecc
Confidence 45677888999998854321000 00 00011110 111111 12345678999999655566689999999986
Q ss_pred CC----------eEEEEecccCCCEEEE-----EEcCCCCEEEEEeC---CCcE----------EEEECCCC
Q 006229 586 SF----------TVKSTLEEHTQWITDV-----RFSPSLSRLATSSA---DRTV----------RVWDTENV 629 (655)
Q Consensus 586 t~----------~~l~tl~gH~~~ItsV-----afsPdg~~LaSgS~---DgtV----------rVWDl~tg 629 (655)
.. ..+..+.-|-..-.-. .-.|+|++|++... |+.+ .|.|+...
T Consensus 408 ~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsGd 479 (638)
T 3sbq_A 408 EAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISGD 479 (638)
T ss_dssp HHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSSS
T ss_pred HHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCCC
Confidence 53 3455554343322111 12568999999764 7655 78888643
No 355
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=21.94 E-value=2.9e+02 Score=27.66 Aligned_cols=71 Identities=11% Similarity=0.013 Sum_probs=43.3
Q ss_pred EEEEcCCCCEEEEEe----CCCcEEEEeCCCCeEEEEecccCCCEEEEEEcCCCCEEEEEeC-CCcEEEEECCCCeEEEE
Q 006229 560 SCHFSPDGKLLATGG----HDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSA-DRTVRVWDTENVRKLTF 634 (655)
Q Consensus 560 sl~fSpdG~lLaSgs----~DgtVrIWDl~t~~~l~tl~gH~~~ItsVafsPdg~~LaSgS~-DgtVrVWDl~tg~~v~~ 634 (655)
+..|++++.+|+-.. .+..|...+++... ...+..+.. ..|+++++.|+-.+. +..|.+-++..+.....
T Consensus 108 ~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l 182 (302)
T 3s25_A 108 CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALF 182 (302)
T ss_dssp EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEE
T ss_pred ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEE
Confidence 346788888877765 23455556666433 334443432 456777888775554 56788888876654433
Q ss_pred E
Q 006229 635 I 635 (655)
Q Consensus 635 l 635 (655)
+
T Consensus 183 ~ 183 (302)
T 3s25_A 183 Y 183 (302)
T ss_dssp E
T ss_pred e
Confidence 3
No 356
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=21.13 E-value=3.6e+02 Score=30.36 Aligned_cols=66 Identities=17% Similarity=0.320 Sum_probs=40.8
Q ss_pred CCCCEEEEEeCCC--cEEEEeCCCCeEEEE-----ecccCCCEEEEEEcCC-CCEEEEEeC--C-----CcEEEEECCCC
Q 006229 565 PDGKLLATGGHDK--KAVLWCTESFTVKST-----LEEHTQWITDVRFSPS-LSRLATSSA--D-----RTVRVWDTENV 629 (655)
Q Consensus 565 pdG~lLaSgs~Dg--tVrIWDl~t~~~l~t-----l~gH~~~ItsVafsPd-g~~LaSgS~--D-----gtVrVWDl~tg 629 (655)
.++++++.||.++ .+.+||+.+.+=... +........++.+..+ ++.++.|+. + ..|.+||+.+.
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 3788999988765 688999887542211 1111122233555555 667777765 3 35889998876
Q ss_pred e
Q 006229 630 R 630 (655)
Q Consensus 630 ~ 630 (655)
.
T Consensus 579 ~ 579 (695)
T 2zwa_A 579 N 579 (695)
T ss_dssp C
T ss_pred c
Confidence 6
No 357
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=20.20 E-value=2.1e+02 Score=29.68 Aligned_cols=68 Identities=7% Similarity=0.011 Sum_probs=43.4
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEEEeccc-CCCEEEEEEc--C-CCCEEEEE-eCCCcEEEEECCCCeEEEEE
Q 006229 568 KLLATGGHDKKAVLWCTESFTVKSTLEEH-TQWITDVRFS--P-SLSRLATS-SADRTVRVWDTENVRKLTFI 635 (655)
Q Consensus 568 ~lLaSgs~DgtVrIWDl~t~~~l~tl~gH-~~~ItsVafs--P-dg~~LaSg-S~DgtVrVWDl~tg~~v~~l 635 (655)
.+++.++.||.|.-+|..+|+.+=+++.- ...+..+.-. + ++..++.. +.||.|..+|..+|.....+
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~ 83 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPL 83 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeee
Confidence 37888999999999999999988777643 1222221100 1 22333333 57999999998887554433
Done!