Query 006231
Match_columns 655
No_of_seqs 440 out of 2827
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 19:31:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006231.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006231hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.8 1.3E-20 4.5E-25 180.6 13.7 113 8-147 35-147 (169)
2 3c5r_A BARD-1, BRCA1-associate 99.8 2.2E-20 7.6E-25 169.6 9.8 119 3-148 1-121 (137)
3 4b93_B Ankyrin repeat domain-c 99.8 5.1E-20 1.7E-24 188.5 12.3 141 3-144 76-226 (269)
4 3aaa_C Myotrophin, protein V-1 99.8 1.1E-19 3.8E-24 162.2 10.9 111 7-144 4-114 (123)
5 1d9s_A Cyclin-dependent kinase 99.8 1.3E-19 4.6E-24 164.8 10.3 114 6-147 8-122 (136)
6 1awc_B Protein (GA binding pro 99.8 4.2E-19 1.4E-23 164.1 13.6 115 6-147 30-144 (153)
7 2jab_A H10-2-G3; HER2, darpin, 99.8 3.3E-19 1.1E-23 162.2 11.4 114 7-147 11-124 (136)
8 1n0q_A 3ANK, 3 ankyrin repeats 99.8 6.6E-19 2.2E-23 150.1 11.6 93 9-128 1-93 (93)
9 3v30_A DNA-binding protein rfx 99.8 1.1E-18 3.7E-23 163.9 13.3 116 7-149 33-148 (172)
10 3twr_A Tankyrase-2; ankyrin re 99.8 7.5E-19 2.6E-23 163.9 11.9 137 7-144 5-149 (165)
11 3v31_A Ankyrin repeat family A 99.8 2.1E-18 7.3E-23 161.1 13.6 138 10-148 3-147 (167)
12 3f6q_A Integrin-linked protein 99.8 1.2E-18 4.2E-23 165.2 11.7 112 7-145 36-147 (179)
13 2y1l_E Darpin-8.4; hydrolase-i 99.8 2.7E-18 9.2E-23 161.5 13.3 140 7-147 11-157 (169)
14 2rfm_A Putative ankyrin repeat 99.8 2.2E-18 7.7E-23 164.9 12.9 141 6-147 31-178 (192)
15 1n0r_A 4ANK, 4 ankyrin repeats 99.8 2.9E-18 9.9E-23 151.1 12.6 112 9-147 1-112 (126)
16 2l6b_A NR1C; ankyrin, consensu 99.8 1.2E-18 4.2E-23 153.4 9.6 108 6-140 5-112 (115)
17 1bi7_B P16INK4A, MTS1, multipl 99.8 1.4E-18 4.7E-23 161.7 9.7 114 6-147 8-122 (156)
18 4gpm_A Engineered protein OR26 99.8 3.7E-18 1.3E-22 163.5 12.6 109 12-147 6-114 (169)
19 2rfm_A Putative ankyrin repeat 99.8 3E-18 1E-22 164.0 11.4 89 58-147 57-145 (192)
20 3ehr_A Osteoclast-stimulating 99.8 8.7E-19 3E-23 171.8 7.9 112 8-146 71-183 (222)
21 3deo_A Signal recognition part 99.8 2.6E-18 8.8E-23 164.3 10.9 112 7-146 41-153 (183)
22 1ihb_A P18-INK4C(INK6), cyclin 99.7 3.5E-18 1.2E-22 158.3 11.4 138 9-147 4-148 (162)
23 1bd8_A P19INK4D CDK4/6 inhibit 99.7 3.8E-18 1.3E-22 157.4 11.3 88 58-147 57-144 (156)
24 4hbd_A KN motif and ankyrin re 99.7 8.9E-18 3E-22 171.7 14.8 143 6-149 107-263 (276)
25 1yyh_A HN1;, notch 1, ankyrin 99.7 9.4E-18 3.2E-22 168.0 14.5 88 59-147 147-234 (253)
26 1ycs_B 53BP2, P53BP2; ankyrin 99.7 2.6E-18 8.9E-23 171.3 10.1 109 8-143 35-144 (239)
27 3ui2_A Signal recognition part 99.7 1.1E-18 3.7E-23 175.3 7.1 111 7-145 42-153 (244)
28 2etb_A Transient receptor pote 99.7 6.1E-18 2.1E-22 168.8 12.2 116 7-148 87-233 (256)
29 3v31_A Ankyrin repeat family A 99.7 7.5E-18 2.6E-22 157.4 11.9 89 58-147 25-113 (167)
30 1oy3_D Transcription factor in 99.7 5.4E-18 1.8E-22 169.8 11.2 114 7-146 155-268 (282)
31 3jxi_A Vanilloid receptor-rela 99.7 5.5E-18 1.9E-22 169.2 11.0 114 8-148 91-237 (260)
32 1oy3_D Transcription factor in 99.7 1.2E-17 4.2E-22 167.1 13.2 86 60-146 149-235 (282)
33 2dzn_A Probable 26S proteasome 99.7 6.2E-18 2.1E-22 164.6 10.7 139 6-145 68-217 (228)
34 1sw6_A Regulatory protein SWI6 99.7 7.1E-18 2.4E-22 176.5 11.7 137 7-144 128-324 (327)
35 2rfa_A Transient receptor pote 99.7 1.2E-17 4.2E-22 163.6 12.7 85 63-148 69-166 (232)
36 2y1l_E Darpin-8.4; hydrolase-i 99.7 1.3E-17 4.5E-22 156.8 11.5 90 57-147 35-124 (169)
37 3twr_A Tankyrase-2; ankyrin re 99.7 1.1E-17 3.8E-22 155.9 10.6 88 59-147 32-119 (165)
38 2xai_A ASB-9, ankyrin repeat a 99.7 1.5E-17 5E-22 167.6 12.3 138 7-147 33-177 (261)
39 3hra_A Ankyrin repeat family p 99.7 3.4E-17 1.2E-21 156.6 14.2 140 7-147 36-189 (201)
40 3t8k_A Uncharacterized protein 99.7 2.9E-18 1E-22 166.6 6.6 113 8-147 36-165 (186)
41 2dzn_A Probable 26S proteasome 99.7 3.8E-17 1.3E-21 159.0 14.3 141 6-147 32-185 (228)
42 1yyh_A HN1;, notch 1, ankyrin 99.7 4.1E-17 1.4E-21 163.3 14.4 140 7-147 54-201 (253)
43 2f8y_A Notch homolog 1, transl 99.7 3.4E-17 1.1E-21 159.2 13.1 141 7-148 55-203 (223)
44 2etb_A Transient receptor pote 99.7 1.3E-17 4.4E-22 166.4 10.2 123 7-145 40-181 (256)
45 3f6q_A Integrin-linked protein 99.7 3.5E-17 1.2E-21 155.1 12.0 114 8-147 3-116 (179)
46 3b7b_A Euchromatic histone-lys 99.7 1.6E-17 5.3E-22 163.1 9.7 140 7-147 74-221 (237)
47 2rfa_A Transient receptor pote 99.7 5.1E-17 1.8E-21 159.1 13.3 144 6-149 33-210 (232)
48 2vge_A RELA-associated inhibit 99.7 1.5E-17 5.3E-22 165.9 9.6 109 8-143 19-128 (229)
49 3v30_A DNA-binding protein rfx 99.7 3.5E-17 1.2E-21 153.6 11.5 111 10-146 2-112 (172)
50 2pnn_A Transient receptor pote 99.7 3.1E-17 1.1E-21 165.5 11.9 130 6-148 97-245 (273)
51 1ihb_A P18-INK4C(INK6), cyclin 99.7 2.3E-17 7.7E-22 152.8 9.7 89 57-147 26-114 (162)
52 2f8y_A Notch homolog 1, transl 99.7 1.2E-16 4E-21 155.4 15.0 140 7-147 22-169 (223)
53 1k1a_A B-cell lymphoma 3-encod 99.7 2.4E-17 8.1E-22 161.6 10.0 139 7-146 76-226 (241)
54 1bi7_B P16INK4A, MTS1, multipl 99.7 8.9E-18 3.1E-22 156.2 6.5 108 7-142 42-150 (156)
55 3aji_A 26S proteasome non-ATPa 99.7 5.1E-17 1.7E-21 158.8 11.9 137 7-144 70-213 (231)
56 3d9h_A CDNA FLJ77766, highly s 99.7 6.2E-17 2.1E-21 165.7 13.0 139 7-148 89-234 (285)
57 3aji_A 26S proteasome non-ATPa 99.7 9.3E-17 3.2E-21 156.9 13.4 87 59-146 63-149 (231)
58 3jxi_A Vanilloid receptor-rela 99.7 3E-17 1E-21 163.9 9.9 123 8-146 44-186 (260)
59 2pnn_A Transient receptor pote 99.7 4.9E-17 1.7E-21 164.0 11.0 124 7-146 51-194 (273)
60 3ljn_A Hypothetical protein; a 99.7 4.4E-17 1.5E-21 171.2 10.5 114 7-147 135-255 (364)
61 1ikn_D Protein (I-kappa-B-alph 99.7 5.5E-17 1.9E-21 159.9 10.5 139 7-146 42-194 (236)
62 2jab_A H10-2-G3; HER2, darpin, 99.7 1.2E-16 4.1E-21 145.2 11.8 93 7-126 44-136 (136)
63 1s70_B 130 kDa myosin-binding 99.7 3.8E-17 1.3E-21 165.9 9.4 112 8-146 38-149 (299)
64 3kea_A K1L; tropism, ANK repea 99.7 8E-17 2.8E-21 165.1 11.4 112 6-146 27-139 (285)
65 1ikn_D Protein (I-kappa-B-alph 99.7 8.7E-17 3E-21 158.5 11.1 140 6-146 4-161 (236)
66 2xai_A ASB-9, ankyrin repeat a 99.7 1.2E-16 4E-21 161.0 12.3 110 9-146 2-111 (261)
67 1k1a_A B-cell lymphoma 3-encod 99.7 1.9E-16 6.5E-21 155.1 13.5 119 6-147 5-127 (241)
68 1s70_B 130 kDa myosin-binding 99.7 1.4E-16 4.7E-21 161.8 12.8 68 7-101 70-137 (299)
69 1bd8_A P19INK4D CDK4/6 inhibit 99.7 8E-17 2.7E-21 148.4 10.0 111 10-147 2-112 (156)
70 1awc_B Protein (GA binding pro 99.7 1.4E-16 4.9E-21 147.1 11.5 109 11-147 3-111 (153)
71 3hra_A Ankyrin repeat family p 99.7 2.4E-16 8.3E-21 150.7 13.4 114 7-146 2-116 (201)
72 3ljn_A Hypothetical protein; a 99.7 8.8E-17 3E-21 168.8 11.0 138 7-146 50-221 (364)
73 2b0o_E UPLC1; arfgap, structur 99.7 6.6E-17 2.3E-21 168.4 9.9 106 7-145 187-295 (301)
74 3d9h_A CDNA FLJ77766, highly s 99.7 1.9E-16 6.6E-21 162.1 13.1 114 6-147 55-168 (285)
75 1d9s_A Cyclin-dependent kinase 99.7 5.9E-17 2E-21 147.2 8.1 94 7-128 42-136 (136)
76 1n11_A Ankyrin; clathrin, BAND 99.7 1.5E-16 5E-21 171.1 12.0 139 7-146 242-387 (437)
77 2zgd_A 3 repeat synthetic anky 99.7 1.6E-16 5.5E-21 140.0 10.1 91 5-122 19-109 (110)
78 1n11_A Ankyrin; clathrin, BAND 99.7 2.1E-16 7E-21 169.9 12.6 113 7-146 11-123 (437)
79 3b7b_A Euchromatic histone-lys 99.7 3.5E-16 1.2E-20 153.4 12.6 139 6-145 7-153 (237)
80 3utm_A Tankyrase-1; tankyrase, 99.7 2.6E-16 8.9E-21 161.8 12.2 110 8-144 56-165 (351)
81 1n0r_A 4ANK, 4 ankyrin repeats 99.7 5.4E-16 1.9E-20 136.4 12.3 96 6-128 31-126 (126)
82 3utm_A Tankyrase-1; tankyrase, 99.7 3.6E-16 1.2E-20 160.8 12.0 112 6-144 207-321 (351)
83 1wdy_A 2-5A-dependent ribonucl 99.6 6.9E-16 2.4E-20 153.7 13.6 136 10-146 5-158 (285)
84 1wdy_A 2-5A-dependent ribonucl 99.6 9.4E-16 3.2E-20 152.7 14.4 137 8-145 103-262 (285)
85 1dcq_A PYK2-associated protein 99.6 3.9E-16 1.3E-20 160.7 11.5 95 7-128 166-263 (278)
86 4b93_B Ankyrin repeat domain-c 99.6 4.5E-16 1.6E-20 159.1 11.5 140 7-147 8-163 (269)
87 3lvq_E ARF-GAP with SH3 domain 99.6 4.8E-16 1.6E-20 172.3 11.8 105 7-144 168-275 (497)
88 2vge_A RELA-associated inhibit 99.6 1.6E-16 5.5E-21 158.6 6.4 109 7-142 51-162 (229)
89 1ycs_B 53BP2, P53BP2; ankyrin 99.6 2.8E-16 9.5E-21 156.6 7.3 113 7-147 2-114 (239)
90 3jue_A Arfgap with coiled-coil 99.6 9.3E-16 3.2E-20 165.0 11.9 112 10-148 199-313 (368)
91 1dcq_A PYK2-associated protein 99.6 1.4E-15 4.9E-20 156.5 12.5 116 11-147 131-249 (278)
92 3kea_A K1L; tropism, ANK repea 99.6 3.5E-16 1.2E-20 160.4 7.8 116 3-146 54-171 (285)
93 3eu9_A Huntingtin-interacting 99.6 3.2E-15 1.1E-19 145.4 13.6 141 6-146 5-152 (240)
94 3lvq_E ARF-GAP with SH3 domain 99.6 1.1E-15 3.8E-20 169.4 11.7 111 11-148 133-252 (497)
95 4g8k_A 2-5A-dependent ribonucl 99.6 5.8E-15 2E-19 153.3 16.3 144 3-147 48-213 (337)
96 2fo1_E LIN-12 protein; beta-ba 99.6 2.4E-15 8.2E-20 159.9 13.5 144 3-147 156-324 (373)
97 2fo1_E LIN-12 protein; beta-ba 99.6 1.3E-15 4.5E-20 161.9 11.4 145 3-148 189-358 (373)
98 2b0o_E UPLC1; arfgap, structur 99.6 1.8E-15 6.3E-20 157.5 11.9 112 10-148 151-271 (301)
99 3eu9_A Huntingtin-interacting 99.6 3.5E-15 1.2E-19 145.1 11.7 91 56-147 29-120 (240)
100 4hbd_A KN motif and ankyrin re 99.6 3.4E-15 1.2E-19 152.5 12.0 93 7-126 180-273 (276)
101 3t8k_A Uncharacterized protein 99.6 5.7E-16 1.9E-20 150.4 5.7 106 11-145 7-124 (186)
102 3ehr_A Osteoclast-stimulating 99.6 9.3E-16 3.2E-20 150.2 7.1 104 7-136 103-206 (222)
103 3jue_A Arfgap with coiled-coil 99.6 4.7E-15 1.6E-19 159.5 12.3 94 8-128 233-326 (368)
104 3aaa_C Myotrophin, protein V-1 99.6 2.7E-15 9.2E-20 133.7 6.9 80 7-113 37-116 (123)
105 4g8k_A 2-5A-dependent ribonucl 99.6 9.6E-15 3.3E-19 151.7 11.3 113 9-147 24-136 (337)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.5 1E-14 3.4E-19 124.0 8.7 79 69-147 1-79 (93)
107 3c5r_A BARD-1, BRCA1-associate 99.5 2.1E-15 7E-20 136.7 4.1 93 7-126 40-132 (137)
108 3deo_A Signal recognition part 99.5 1.7E-14 5.9E-19 137.6 9.6 83 7-116 73-156 (183)
109 3ui2_A Signal recognition part 99.5 2E-14 6.9E-19 144.2 10.3 100 7-150 74-174 (244)
110 1sw6_A Regulatory protein SWI6 99.4 4E-14 1.4E-18 148.0 5.1 86 59-145 120-210 (327)
111 2zgd_A 3 repeat synthetic anky 99.4 1.5E-13 5.1E-18 120.9 7.9 86 62-148 17-102 (110)
112 2aja_A Ankyrin repeat family p 99.4 4.4E-14 1.5E-18 152.3 2.9 115 9-148 91-211 (376)
113 2l6b_A NR1C; ankyrin, consensu 99.4 2.7E-13 9.2E-18 119.0 7.0 81 65-146 5-85 (115)
114 2aja_A Ankyrin repeat family p 99.3 5.6E-14 1.9E-18 151.5 -4.3 110 5-146 123-235 (376)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.84 E-value=1.3e-20 Score=180.60 Aligned_cols=113 Identities=19% Similarity=0.299 Sum_probs=98.5
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHHH
Q 006231 8 KYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETATE 87 (655)
Q Consensus 8 k~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~Vk 87 (655)
..|.||||+|+..++.++++.||+. |++++.+|. .|+||||+||..|+.++|+
T Consensus 35 ~~g~t~l~~a~~~~~~~~~~~ll~~--------------------------gad~~~~d~-~g~TpLh~A~~~g~~~~v~ 87 (169)
T 4gpm_A 35 SDGRTPLHHAAENGHKEVVKLLISK--------------------------GADVNAKDS-DGRTPLHHAAENGHKEVVK 87 (169)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHT--------------------------TCCTTCCCT-TSCCHHHHHHHTTCHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhc--------------------------ccchhhhcc-CCCCHHHHHHHcCCHHHHH
Confidence 4456666666666666666666554 577999997 9999999999999999999
Q ss_pred HHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 88 MLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 88 lLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
+||++|+|+|.+|..|+||||+|+..|+.+++++|++++++++..+..|+||+++|+...
T Consensus 88 ~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g 147 (169)
T 4gpm_A 88 LLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHG 147 (169)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999999999998543
No 2
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.82 E-value=2.2e-20 Score=169.60 Aligned_cols=119 Identities=23% Similarity=0.174 Sum_probs=108.2
Q ss_pred CCC--CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHc
Q 006231 3 GID--VSKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKL 80 (655)
Q Consensus 3 Gad--~nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~ 80 (655)
|+| .+..|.||||+||..|+.++++.||+. |++++.+|. .|+||||+|+..
T Consensus 1 G~d~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--------------------------g~~~~~~~~-~g~t~L~~A~~~ 53 (137)
T 3c5r_A 1 GIDPFTNHRGETLLHIASIKGDIPSVEYLLQN--------------------------GSDPNVKDH-AGWTPLHEACNH 53 (137)
T ss_dssp ---CCCCTTCCCHHHHHHHHTCHHHHHHHHHT--------------------------TCCSCCCCT-TSCCHHHHHHHT
T ss_pred CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc--------------------------CCCCCcCCC-CCCCHHHHHHHc
Confidence 455 467899999999999999999999987 356888997 999999999999
Q ss_pred CChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhhc
Q 006231 81 GDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRRM 148 (655)
Q Consensus 81 G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~~ 148 (655)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.||+++|+....
T Consensus 54 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~ 121 (137)
T 3c5r_A 54 GHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESM 121 (137)
T ss_dssp TCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHH
T ss_pred CCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccH
Confidence 99999999999999999999999999999999999999999999999999999999999999874443
No 3
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.81 E-value=5.1e-20 Score=188.51 Aligned_cols=141 Identities=20% Similarity=0.211 Sum_probs=118.5
Q ss_pred CCCC---CCCCChHHHHHHHcCCHHHHHHHHhcCCCCC-CchhhhhhhhHhHHHH------hhhhccccccccCCCCCCc
Q 006231 3 GIDV---SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLS-NPAEIRTEMASLAEEE------KADAISAAIDRRDVPNRDT 72 (655)
Q Consensus 3 Gad~---nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~-dp~~i~te~~saa~e~------~~~~igA~In~kD~p~G~T 72 (655)
|+++ +.+|+||||+||..|+.++++.||..+.... ......|..+.+.... .....|+++|.+|. .|+|
T Consensus 76 Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~-~g~T 154 (269)
T 4b93_B 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDL-SGNT 154 (269)
T ss_dssp CCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT-TCCC
T ss_pred CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCC-CCCC
Confidence 5664 4679999999999999999999998765421 1222334444433222 22335789999998 9999
Q ss_pred HHHHHHHcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHH
Q 006231 73 PLHLAVKLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGT 144 (655)
Q Consensus 73 PLHlAv~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAa 144 (655)
|||+||..|+.++|++||++|+|+|.++..|+||||+|+..|+.+++++|+++|++++..+..|+||+++|+
T Consensus 155 pL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~ 226 (269)
T 4b93_B 155 PLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAE 226 (269)
T ss_dssp HHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSC
T ss_pred HHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999986
No 4
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.80 E-value=1.1e-19 Score=162.24 Aligned_cols=111 Identities=14% Similarity=0.118 Sum_probs=103.1
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETAT 86 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~V 86 (655)
+..|.+|||+|+..|+.++++.||+.+ ++++.+|. .|+||||+|+..|+.+++
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~--------------------------~~~~~~~~-~g~t~L~~A~~~~~~~~v 56 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKG--------------------------EDVNRTLE-GGRKPLHYAADCGQLEIL 56 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTT--------------------------CCTTSCCT-TSSCHHHHHHHTTCHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcC--------------------------CCcCccCC-CCCcHHHHHHHcCCHHHH
Confidence 456889999999999999999999873 45888897 999999999999999999
Q ss_pred HHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHH
Q 006231 87 EMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGT 144 (655)
Q Consensus 87 klLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAa 144 (655)
++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.||+++|.
T Consensus 57 ~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 57 EFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred HHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999985
No 5
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.80 E-value=1.3e-19 Score=164.77 Aligned_cols=114 Identities=16% Similarity=0.155 Sum_probs=106.8
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhH
Q 006231 6 VSKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETA 85 (655)
Q Consensus 6 ~nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~ 85 (655)
.+..|.||||+|+..|+.++++.||+.+ ++++.+|. .|+||||+|+. |+.++
T Consensus 8 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--------------------------~~~~~~~~-~g~t~L~~A~~-~~~~~ 59 (136)
T 1d9s_A 8 LGGSSDAGLATAAARGQVETVRQLLEAG--------------------------ADPNALNR-FGRRPIQVMMM-GSAQV 59 (136)
T ss_dssp CCCCCSCHHHHHHHTTCHHHHHHHHHTT--------------------------CCTTCCCT-TCCTTTTTSTT-SCHHH
T ss_pred CCCCCccHHHHHHHcCCHHHHHHHHHcC--------------------------CCcCCcCC-CCCCHHHHHHc-CCHHH
Confidence 3567899999999999999999999873 56888897 99999999999 99999
Q ss_pred HHHHHhcCCCCcccCCC-CCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 86 TEMLMVAGADWSLQNEQ-GWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 86 VklLL~~GADvn~~n~~-G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
+++|+++|++++.+|.. |+||||+|+..|+.+++++|++++++++..+..|.||+++|+...
T Consensus 60 v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~ 122 (136)
T 1d9s_A 60 AELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQG 122 (136)
T ss_dssp HHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHT
T ss_pred HHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 99999999999999999 999999999999999999999999999999999999999999654
No 6
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.80 E-value=4.2e-19 Score=164.13 Aligned_cols=115 Identities=19% Similarity=0.209 Sum_probs=101.5
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhH
Q 006231 6 VSKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETA 85 (655)
Q Consensus 6 ~nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~ 85 (655)
.+..|.||||+|+..|+.++++.|++. |++++.+|. .|+||||+|+..|+.++
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~--------------------------g~~~~~~~~-~g~t~L~~A~~~~~~~~ 82 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRA--------------------------GVSRDARTK-VDRTPLHMAASEGHANI 82 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTT--------------------------TCCTTCCCT-TCCCHHHHHHHHTCHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc--------------------------CCCCCCCCC-CCCCHHHHHHHcChHHH
Confidence 345567777777777777777777765 456888897 99999999999999999
Q ss_pred HHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 86 TEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 86 VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
+++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.||+++|+...
T Consensus 83 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 144 (153)
T 1awc_B 83 VEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNG 144 (153)
T ss_dssp HHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999998554
No 7
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.79 E-value=3.3e-19 Score=162.17 Aligned_cols=114 Identities=20% Similarity=0.171 Sum_probs=106.0
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETAT 86 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~V 86 (655)
...+.||||+||..|+.++++.||+.+ ++++.+|. .|+||||+||..|+.+++
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g--------------------------~~~~~~~~-~g~t~L~~A~~~~~~~~v 63 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANG--------------------------ADVNAKDE-YGLTPLYLATAHGHLEIV 63 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTT--------------------------CCTTCCCT-TSCCHHHHHHHHTCHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcC--------------------------CCCCCcCC-CCCCHHHHHHHcCCHHHH
Confidence 345689999999999999999999973 56888897 999999999999999999
Q ss_pred HHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 87 EMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 87 klLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.||+++|+...
T Consensus 64 ~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~ 124 (136)
T 2jab_A 64 EVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNG 124 (136)
T ss_dssp HHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCC
Confidence 9999999999999999999999999999999999999999999999999999999999554
No 8
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.78 E-value=6.6e-19 Score=150.10 Aligned_cols=93 Identities=25% Similarity=0.368 Sum_probs=86.7
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHHHH
Q 006231 9 YAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETATEM 88 (655)
Q Consensus 9 ~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~Vkl 88 (655)
.|+||||+||..|+.++++.||+. |+++|.+|. .|+||||+|+..|+.+++++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~--------------------------g~~~n~~d~-~g~t~L~~A~~~~~~~~v~~ 53 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEA--------------------------GADVNAKDK-NGRTPLHLAARNGHLEVVKL 53 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT--------------------------TCCTTCCCT-TSCCHHHHHHHTTCHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHc--------------------------CCCCcccCC-CCCCHHHHHHHcCCHHHHHH
Confidence 478999999999999999999987 456899997 99999999999999999999
Q ss_pred HHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCC
Q 006231 89 LMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQP 128 (655)
Q Consensus 89 LL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~ 128 (655)
|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 54 Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 54 LLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999998863
No 9
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.78 E-value=1.1e-18 Score=163.92 Aligned_cols=116 Identities=17% Similarity=0.113 Sum_probs=100.9
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETAT 86 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~V 86 (655)
+..|.||||+||..|+.++++.||+. |++++.+|. .|.||||+|+..|+.+++
T Consensus 33 ~~~g~t~L~~A~~~~~~~~v~~Ll~~--------------------------g~~~~~~~~-~g~t~L~~A~~~~~~~~v 85 (172)
T 3v30_A 33 DERGFTPLIWASAFGEIETVRFLLEW--------------------------GADPHILAK-ERESALSLASTGGYTDIV 85 (172)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHH--------------------------TCCTTCCCT-TCCCHHHHHHHTTCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHc--------------------------CCCchhhcc-cCCCHHHHHHHCCCHHHH
Confidence 45667777777777777777777765 466888887 999999999999999999
Q ss_pred HHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhhcc
Q 006231 87 EMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRRMR 149 (655)
Q Consensus 87 klLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~~~ 149 (655)
++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.||+++|+.....
T Consensus 86 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~ 148 (172)
T 3v30_A 86 GLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYR 148 (172)
T ss_dssp HHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcH
Confidence 999999999999999999999999999999999999999999999999999999999866443
No 10
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.78 E-value=7.5e-19 Score=163.88 Aligned_cols=137 Identities=17% Similarity=0.135 Sum_probs=86.2
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCC--chhhhhhhhHhHHHHh------hhhccccccccCCCCCCcHHHHHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSN--PAEIRTEMASLAEEEK------ADAISAAIDRRDVPNRDTPLHLAV 78 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~d--p~~i~te~~saa~e~~------~~~igA~In~kD~p~G~TPLHlAv 78 (655)
+..|.+|||+|+..|+.++++.||+..+.... .....|.++.++.... ....|++++.+|. .|+||||+|+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~ 83 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDK-GGLVPLHNAC 83 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCC-CCCCHHHHHH
Confidence 44455666666666666666666553221100 0011122222221111 1112456777776 7888888888
Q ss_pred HcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHH
Q 006231 79 KLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGT 144 (655)
Q Consensus 79 ~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAa 144 (655)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.||+++|.
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~ 149 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVK 149 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSC
T ss_pred HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHh
Confidence 888888888888888888888888888888888888888888888888777777777888887754
No 11
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.77 E-value=2.1e-18 Score=161.11 Aligned_cols=138 Identities=14% Similarity=0.031 Sum_probs=98.6
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCCC-chhhhhhhhHhHHHHh------hhhccccccccCCCCCCcHHHHHHHcCC
Q 006231 10 AHSPVHKAIAMRDYPSLRRLLAGLPRLSN-PAEIRTEMASLAEEEK------ADAISAAIDRRDVPNRDTPLHLAVKLGD 82 (655)
Q Consensus 10 G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~d-p~~i~te~~saa~e~~------~~~igA~In~kD~p~G~TPLHlAv~~G~ 82 (655)
|.||||+||..|+.++++.||+.+..+.. .....|.++.++.... ....|++++..|. .|.||||+|+..|+
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGK-GRESALSLACSKGY 81 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHHTC
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHcCC
Confidence 45566666666666666666554322111 1112233333222111 1113567888887 89999999999999
Q ss_pred hhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhhc
Q 006231 83 ETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRRM 148 (655)
Q Consensus 83 le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~~ 148 (655)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.||+++|+....
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 147 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGY 147 (167)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCc
Confidence 999999999999999999999999999999999999999999999988888889999999886543
No 12
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.77 E-value=1.2e-18 Score=165.18 Aligned_cols=112 Identities=23% Similarity=0.222 Sum_probs=91.8
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETAT 86 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~V 86 (655)
+..|.||||+||..|+.++++.||+. |++++.+|. .|.||||+|+..|+.+++
T Consensus 36 ~~~g~t~L~~A~~~~~~~~v~~Ll~~--------------------------g~~~~~~~~-~g~t~L~~A~~~~~~~~v 88 (179)
T 3f6q_A 36 DDHGFSPLHWACREGRSAVVEMLIMR--------------------------GARINVMNR-GDDTPLHLAASHGHRDIV 88 (179)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHT--------------------------TCCTTCCCT-TCCCHHHHHHHTTCHHHH
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHc--------------------------CCCCCCcCC-CCCCHHHHHHHcCCHHHH
Confidence 34566666666666666666666665 456888886 899999999999999999
Q ss_pred HHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHH
Q 006231 87 EMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTM 145 (655)
Q Consensus 87 klLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL 145 (655)
++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.||+++|+.
T Consensus 89 ~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~ 147 (179)
T 3f6q_A 89 QKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKA 147 (179)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCH
T ss_pred HHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHH
Confidence 99999999999999899999999999999999999999988888888888999988763
No 13
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.76 E-value=2.7e-18 Score=161.55 Aligned_cols=140 Identities=17% Similarity=0.094 Sum_probs=97.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCC-chhhhhhhhHhHHHH------hhhhccccccccCCCCCCcHHHHHHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSN-PAEIRTEMASLAEEE------KADAISAAIDRRDVPNRDTPLHLAVK 79 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~d-p~~i~te~~saa~e~------~~~~igA~In~kD~p~G~TPLHlAv~ 79 (655)
...+.+|||+||..|+.++++.||+.+..+.. .....|.++.++... .....|++++.+|. .|.||||+|+.
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~ 89 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDH-AGMTPLRLAAL 89 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHH
Confidence 34456677777777777777777766433211 112223333332211 11123567888886 88888888888
Q ss_pred cCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 80 LGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 80 ~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.||+++|+...
T Consensus 90 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 157 (169)
T 2y1l_E 90 FGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNG 157 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhC
Confidence 88888888888888888888888888888888888888888888888888888888888888887443
No 14
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.76 E-value=2.2e-18 Score=164.88 Aligned_cols=141 Identities=14% Similarity=0.162 Sum_probs=108.3
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCC-chhhhhhhhHhHHHHh------hhhccccccccCCCCCCcHHHHHH
Q 006231 6 VSKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSN-PAEIRTEMASLAEEEK------ADAISAAIDRRDVPNRDTPLHLAV 78 (655)
Q Consensus 6 ~nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~d-p~~i~te~~saa~e~~------~~~igA~In~kD~p~G~TPLHlAv 78 (655)
.+..|.||||+||..|+.++++.|++.+..+.. .....|.++.++.... ....|++++.+|. .|.||||+|+
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~ 109 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDF-SGKTPLMWSI 109 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-TSCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHH
Confidence 467889999999999999999999987543211 1223444444433222 2224677888886 8888888888
Q ss_pred HcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 79 KLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 79 ~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.||+++|+...
T Consensus 110 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 178 (192)
T 2rfm_A 110 IFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFG 178 (192)
T ss_dssp HHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTT
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhC
Confidence 888888888888888888888888888888888888888888888888888888888888888887543
No 15
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.76 E-value=2.9e-18 Score=151.05 Aligned_cols=112 Identities=22% Similarity=0.297 Sum_probs=104.9
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHHHH
Q 006231 9 YAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETATEM 88 (655)
Q Consensus 9 ~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~Vkl 88 (655)
+|.||||+|+..|+.++++.|++.+ ++++..|. .|.||||+|+..|+.+++++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~--------------------------~~~~~~~~-~g~t~L~~A~~~~~~~~~~~ 53 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAG--------------------------ADVNAKDK-NGRTPLHLAARNGHLEVVKL 53 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHT--------------------------CCTTCCCT-TSCCHHHHHHHHTCHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcC--------------------------CCCCCcCC-CCCcHHHHHHHcCcHHHHHH
Confidence 4899999999999999999999873 45788887 99999999999999999999
Q ss_pred HHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 89 LMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 89 LL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
|+++|++++.+|..|+||||+|+..|+.+++++|++++.+++..+..|.||+++|+...
T Consensus 54 Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 112 (126)
T 1n0r_A 54 LLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 112 (126)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999998543
No 16
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.76 E-value=1.2e-18 Score=153.39 Aligned_cols=108 Identities=23% Similarity=0.319 Sum_probs=99.3
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhH
Q 006231 6 VSKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETA 85 (655)
Q Consensus 6 ~nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~ 85 (655)
.+..|.||||+||..|+.++++.||+.+ ++++.+|. .|.||||+|+..|+.++
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g--------------------------~~~~~~d~-~g~t~L~~A~~~~~~~~ 57 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKG--------------------------ADVNARSK-DGNTPLHLAAKNGHAEI 57 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTT--------------------------CCSSCCCS-SSCCTTHHHHTTTCHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC--------------------------CCCCCcCC-CCCCHHHHHHHcCcHHH
Confidence 4678999999999999999999999873 56888897 99999999999999999
Q ss_pred HHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcch
Q 006231 86 TEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPR 140 (655)
Q Consensus 86 VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl 140 (655)
+++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..+.+|-
T Consensus 58 ~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 58 VKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HHHHTTTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 9999999999999999999999999999999999999999999999888888763
No 17
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.76 E-value=1.4e-18 Score=161.69 Aligned_cols=114 Identities=16% Similarity=0.148 Sum_probs=102.0
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhH
Q 006231 6 VSKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETA 85 (655)
Q Consensus 6 ~nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~ 85 (655)
.+..|.||||+||..|+.++++.||+.+ ++++.+|. .|+||||+|+ .|+.++
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g--------------------------~~~~~~~~-~g~t~L~~A~-~~~~~~ 59 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEAG--------------------------ANPNAPNS-YGRRPIQVMM-MGSARV 59 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTTT--------------------------CCTTCCCS-SSCCTTTSSC-TTCHHH
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHcC--------------------------CCCCCCCC-CCCCHHHHHH-cCCHHH
Confidence 3567899999999999999999999873 55888887 9999999985 899999
Q ss_pred HHHHHhcCCCCcccCCCCCC-hHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 86 TEMLMVAGADWSLQNEQGWS-ALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 86 VklLL~~GADvn~~n~~G~T-pLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
+++|+++|++++.+|..|+| |||+|+..|+.+++++|++++++++..+..|.||+++|+...
T Consensus 60 v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~ 122 (156)
T 1bi7_B 60 AELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELG 122 (156)
T ss_dssp HHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHT
T ss_pred HHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhC
Confidence 99999999999999999998 999999999999999999999999988999999999998553
No 18
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.75 E-value=3.7e-18 Score=163.52 Aligned_cols=109 Identities=17% Similarity=0.258 Sum_probs=103.8
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHHHHHHh
Q 006231 12 SPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETATEMLMV 91 (655)
Q Consensus 12 TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~VklLL~ 91 (655)
.+|+.||..|+.++|+.||+. |+++|.+|. .|+||||+|+..++.+++++|++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~--------------------------Gadvn~~d~-~g~t~l~~a~~~~~~~~~~~ll~ 58 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIEN--------------------------GADVNASDS-DGRTPLHHAAENGHKEVVKLLIS 58 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT--------------------------TCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHC--------------------------CCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHh
Confidence 479999999999999999997 467999997 99999999999999999999999
Q ss_pred cCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 92 AGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 92 ~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
+|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|+||||+|+...
T Consensus 59 ~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g 114 (169)
T 4gpm_A 59 KGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENG 114 (169)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred cccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999553
No 19
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.75 E-value=3e-18 Score=164.03 Aligned_cols=89 Identities=17% Similarity=0.157 Sum_probs=82.9
Q ss_pred ccccccccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCC
Q 006231 58 ISAAIDRRDVPNRDTPLHLAVKLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRR 137 (655)
Q Consensus 58 igA~In~kD~p~G~TPLHlAv~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~ 137 (655)
.+++++.+|. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.
T Consensus 57 ~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 135 (192)
T 2rfm_A 57 NFDKLEDKDI-EGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGE 135 (192)
T ss_dssp HHCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCC
T ss_pred hccccccccc-cCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Confidence 4678899997 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHhh
Q 006231 138 LPRLVGTMRR 147 (655)
Q Consensus 138 tPl~lAaL~~ 147 (655)
||+|+|+...
T Consensus 136 t~L~~A~~~~ 145 (192)
T 2rfm_A 136 TPLIVASKYG 145 (192)
T ss_dssp CHHHHHHHHT
T ss_pred CHHHHHHHcC
Confidence 9999998554
No 20
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.75 E-value=8.7e-19 Score=171.85 Aligned_cols=112 Identities=21% Similarity=0.214 Sum_probs=105.3
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHHH
Q 006231 8 KYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETATE 87 (655)
Q Consensus 8 k~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~Vk 87 (655)
..|.||||+||..|+.++++.||+. |++++.+|. .|+||||+||..|+.++|+
T Consensus 71 ~~g~t~L~~A~~~g~~~~v~~Ll~~--------------------------g~~~~~~~~-~g~t~L~~A~~~~~~~~v~ 123 (222)
T 3ehr_A 71 ESIDNPLHEAAKRGNLSWLRECLDN--------------------------RVGVNGLDK-AGSTALYWACHGGHKDIVE 123 (222)
T ss_dssp EEESCHHHHHHHHTCHHHHHHHHHT--------------------------TCCTTCCCT-TSCCHHHHHHHTTCHHHHH
T ss_pred cccccccccccccCcHHHHHHHHhC--------------------------CCCccccCC-CCCCHHHHHHHcCCHHHHH
Confidence 4578999999999999999999987 356888997 9999999999999999999
Q ss_pred HHHhc-CCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHh
Q 006231 88 MLMVA-GADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMR 146 (655)
Q Consensus 88 lLL~~-GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~ 146 (655)
+||++ |++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..
T Consensus 124 ~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 183 (222)
T 3ehr_A 124 MLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNA 183 (222)
T ss_dssp HHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSH
T ss_pred HHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcch
Confidence 99999 999999999999999999999999999999999999999999999999999843
No 21
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.75 E-value=2.6e-18 Score=164.27 Aligned_cols=112 Identities=21% Similarity=0.163 Sum_probs=104.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETAT 86 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~V 86 (655)
+..|.||||+||..|+.++++.||+ + +++|.+|. .|+||||+|+..|+.+++
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~--------------------------~~~~~~d~-~g~t~L~~A~~~~~~~~v 92 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-D--------------------------RDVDAVDE-NGRTALLFVAGLGSDKCV 92 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-T--------------------------SCTTCCCT-TSCCHHHHHHHHTCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-c--------------------------CCCCCcCC-CCCCHHHHHHHcCCHHHH
Confidence 4567899999999999999999998 3 34888897 999999999999999999
Q ss_pred HHHHhcCCCCcccC-CCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHh
Q 006231 87 EMLMVAGADWSLQN-EQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMR 146 (655)
Q Consensus 87 klLL~~GADvn~~n-~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~ 146 (655)
++|+++|++++.++ ..|+||||+|+..|+.+++++|++++++++..+..|.||+++|+..
T Consensus 93 ~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 93 RLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREI 153 (183)
T ss_dssp HHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHh
Confidence 99999999999998 8999999999999999999999999999999999999999999843
No 22
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.75 E-value=3.5e-18 Score=158.27 Aligned_cols=138 Identities=16% Similarity=0.085 Sum_probs=104.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCCC-chhhhhhhhHhHH-----HHhhhhccccccccCCCCCCcHHHHHHHcCC
Q 006231 9 YAHSPVHKAIAMRDYPSLRRLLAGLPRLSN-PAEIRTEMASLAE-----EEKADAISAAIDRRDVPNRDTPLHLAVKLGD 82 (655)
Q Consensus 9 ~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~d-p~~i~te~~saa~-----e~~~~~igA~In~kD~p~G~TPLHlAv~~G~ 82 (655)
...+|||+|+..|+.++++.||+.+..... .....|.++.+.. -+.....|++++.+|. .|.||||+|+..|+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLKDR-TGFAVIHDAARAGF 82 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCSSCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTC
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHcCcHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCC
Confidence 345777777777777777777776543211 1122233333221 1112224678888897 99999999999999
Q ss_pred hhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCC-hhHhhhcCCcchHHHHHhh
Q 006231 83 ETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQP-LAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 83 le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~-~~~~d~~g~tPl~lAaL~~ 147 (655)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++++. .+..+..|.||+++|+...
T Consensus 83 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~ 148 (162)
T 1ihb_A 83 LDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYG 148 (162)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999887 5788889999999998553
No 23
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.75 E-value=3.8e-18 Score=157.39 Aligned_cols=88 Identities=17% Similarity=0.191 Sum_probs=80.5
Q ss_pred ccccccccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCC
Q 006231 58 ISAAIDRRDVPNRDTPLHLAVKLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRR 137 (655)
Q Consensus 58 igA~In~kD~p~G~TPLHlAv~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~ 137 (655)
.|++++.+|. .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++ ++++..+..|.
T Consensus 57 ~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~ 134 (156)
T 1bd8_A 57 QGASPNVQDT-SGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGL 134 (156)
T ss_dssp TTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSC
T ss_pred CCCCCCCcCC-CCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCC
Confidence 3677899997 999999999999999999999999999999999999999999999999999999988 88888889999
Q ss_pred cchHHHHHhh
Q 006231 138 LPRLVGTMRR 147 (655)
Q Consensus 138 tPl~lAaL~~ 147 (655)
||+++|+...
T Consensus 135 t~l~~A~~~~ 144 (156)
T 1bd8_A 135 TPLELALQRG 144 (156)
T ss_dssp CHHHHHHHSC
T ss_pred CHHHHHHHcC
Confidence 9999998543
No 24
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.75 E-value=8.9e-18 Score=171.70 Aligned_cols=143 Identities=15% Similarity=0.157 Sum_probs=117.7
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCC-CCC-CchhhhhhhhHhH-----------HHHhhhhccccccccCCCCCCc
Q 006231 6 VSKYAHSPVHKAIAMRDYPSLRRLLAGLP-RLS-NPAEIRTEMASLA-----------EEEKADAISAAIDRRDVPNRDT 72 (655)
Q Consensus 6 ~nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p-~l~-dp~~i~te~~saa-----------~e~~~~~igA~In~kD~p~G~T 72 (655)
.+..|.||||+||..|+.++++.||+.+. ... ......|.++.++ ..+.....|++++..|. .|+|
T Consensus 107 ~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t 185 (276)
T 4hbd_A 107 ADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQ-AGQT 185 (276)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTT-TCCC
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCC-CCCC
Confidence 46789999999999999999999999875 221 1122333333322 12222335677888887 8999
Q ss_pred HHHHHHHcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHH-hcCChhHhhhcCCcchHHHHHhhcc
Q 006231 73 PLHLAVKLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVR-HYQPLAWAKWCRRLPRLVGTMRRMR 149 (655)
Q Consensus 73 PLHlAv~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~-~ga~~~~~d~~g~tPl~lAaL~~~~ 149 (655)
|||+|+..|+.++|++||++|+|++.+|..|+||||+|+..|+.+++++|++ .+++++..+..|.||+++|+.....
T Consensus 186 pLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~ 263 (276)
T 4hbd_A 186 ALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQS 263 (276)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCH
Confidence 9999999999999999999999999999999999999999999999999999 8999999999999999999966443
No 25
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.75 E-value=9.4e-18 Score=167.97 Aligned_cols=88 Identities=23% Similarity=0.270 Sum_probs=47.3
Q ss_pred cccccccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCc
Q 006231 59 SAAIDRRDVPNRDTPLHLAVKLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRL 138 (655)
Q Consensus 59 gA~In~kD~p~G~TPLHlAv~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~t 138 (655)
|++++.+|. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|+|
T Consensus 147 g~~~~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t 225 (253)
T 1yyh_A 147 HADVNAVDD-LGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRL 225 (253)
T ss_dssp TCCTTCBCT-TSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred CCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCC
Confidence 344555554 5555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred chHHHHHhh
Q 006231 139 PRLVGTMRR 147 (655)
Q Consensus 139 Pl~lAaL~~ 147 (655)
|+++|+...
T Consensus 226 pl~~A~~~g 234 (253)
T 1yyh_A 226 PRDIAQERM 234 (253)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 555555443
No 26
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.74 E-value=2.6e-18 Score=171.32 Aligned_cols=109 Identities=13% Similarity=0.144 Sum_probs=94.1
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHHH
Q 006231 8 KYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETATE 87 (655)
Q Consensus 8 k~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~Vk 87 (655)
..|.||||+|+..|+.++++.||+. |+++|.+|. .|+||||+||..|+.++|+
T Consensus 35 ~~~~t~L~~A~~~g~~~~v~~Ll~~--------------------------g~~~~~~d~-~g~t~L~~A~~~g~~~~v~ 87 (239)
T 1ycs_B 35 PLPLALLLDSSLEGEFDLVQRIIYE--------------------------VDDPSLPND-EGITALHNAVCAGHTEIVK 87 (239)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTST--------------------------TSSCCCCCT-TSCCHHHHHHHHTCHHHHH
T ss_pred chhhHHHHHHHHcCCHHHHHHHHHc--------------------------CCCCCCcCC-CCCCHHHHHHHcCCHHHHH
Confidence 3445666666666666666666654 467999997 9999999999999999999
Q ss_pred HHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCC-cchHHH
Q 006231 88 MLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRR-LPRLVG 143 (655)
Q Consensus 88 lLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~-tPl~lA 143 (655)
+||++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..+. ||+++|
T Consensus 88 ~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 88 FLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKC 144 (239)
T ss_dssp HHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHC
T ss_pred HHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHH
Confidence 99999999999999999999999999999999999999999998888877 999987
No 27
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.74 E-value=1.1e-18 Score=175.33 Aligned_cols=111 Identities=21% Similarity=0.171 Sum_probs=104.1
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETAT 86 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~V 86 (655)
+..|.||||+||..|+.++++.||+ + +++|.+|. .|+||||+||..|+.++|
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~--------------------------~~~~~~d~-~g~t~L~~A~~~g~~~~v 93 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-D--------------------------RDVDAVDE-NGRTALLFVAGLGSDKCV 93 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-T--------------------------CCTTCBCT-TSCBHHHHHHHHTCHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-C--------------------------CCCCCcCC-CCCCHHHHHHHCCCHHHH
Confidence 4567899999999999999999998 3 35888997 999999999999999999
Q ss_pred HHHHhcCCCCcccC-CCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHH
Q 006231 87 EMLMVAGADWSLQN-EQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTM 145 (655)
Q Consensus 87 klLL~~GADvn~~n-~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL 145 (655)
++||++|++++.++ ..|+||||+|+..|+.+++++|++++++++..+..|.||+++|+.
T Consensus 94 ~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 94 RLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELARE 153 (244)
T ss_dssp HHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 99999999999998 889999999999999999999999999999999999999999984
No 28
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.74 E-value=6.1e-18 Score=168.80 Aligned_cols=116 Identities=16% Similarity=0.123 Sum_probs=103.9
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCC------------CCCcHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVP------------NRDTPL 74 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p------------~G~TPL 74 (655)
+..|.||||+||..|+.++++.||+.+ ++++.+|.. .|.|||
T Consensus 87 d~~g~t~L~~A~~~g~~~~v~~Ll~~g--------------------------a~~~~~~~~~~~~~~~~~~~~~g~tpL 140 (256)
T 2etb_A 87 FYQGHSALHIAIEKRSLQCVKLLVENG--------------------------ADVHLRACGRFFQKHQGTCFYFGELPL 140 (256)
T ss_dssp TTTTCCHHHHHHHTTCHHHHHHHHHTT--------------------------CCTTCCCCSGGGSCCSSSCCCSCSSHH
T ss_pred cccCCCHHHHHHHcCCHHHHHHHHHcC--------------------------CCCCcccccccccccccccccCCCCHH
Confidence 467999999999999999999999984 345555530 399999
Q ss_pred HHHHHcCChhHHHHHHh---cCCCCcccCCCCCChHHHHHH--cCCHH-------HHHHHHHhcCCh-------hHhhhc
Q 006231 75 HLAVKLGDETATEMLMV---AGADWSLQNEQGWSALQEAIC--SREEG-------IAMIIVRHYQPL-------AWAKWC 135 (655)
Q Consensus 75 HlAv~~G~le~VklLL~---~GADvn~~n~~G~TpLh~A~~--~G~~e-------IV~lLL~~ga~~-------~~~d~~ 135 (655)
|+|+..|+.+++++||+ +|++++.+|..|+||||+|+. .++.+ ++++|+++|+++ +..+..
T Consensus 141 ~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~ 220 (256)
T 2etb_A 141 SLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQ 220 (256)
T ss_dssp HHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTT
T ss_pred HHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCC
Confidence 99999999999999999 999999999999999999999 78888 999999999999 888999
Q ss_pred CCcchHHHHHhhc
Q 006231 136 RRLPRLVGTMRRM 148 (655)
Q Consensus 136 g~tPl~lAaL~~~ 148 (655)
|.||+++|+....
T Consensus 221 g~tpL~~A~~~g~ 233 (256)
T 2etb_A 221 GLTPLKLAAKEGK 233 (256)
T ss_dssp SCCHHHHHHHTTC
T ss_pred CCCHHHHHHHhCC
Confidence 9999999996643
No 29
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.74 E-value=7.5e-18 Score=157.39 Aligned_cols=89 Identities=24% Similarity=0.207 Sum_probs=84.4
Q ss_pred ccccccccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCC
Q 006231 58 ISAAIDRRDVPNRDTPLHLAVKLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRR 137 (655)
Q Consensus 58 igA~In~kD~p~G~TPLHlAv~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~ 137 (655)
.+++++.+|. .|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|++++++++..+..|.
T Consensus 25 ~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 103 (167)
T 3v31_A 25 QENVINHTDE-EGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGG 103 (167)
T ss_dssp HSSCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSC
T ss_pred cCCCcCCCCC-CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCC
Confidence 4678999997 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHhh
Q 006231 138 LPRLVGTMRR 147 (655)
Q Consensus 138 tPl~lAaL~~ 147 (655)
||+|+|+...
T Consensus 104 t~L~~A~~~~ 113 (167)
T 3v31_A 104 TPLLYAVHGN 113 (167)
T ss_dssp CHHHHHHHTT
T ss_pred CHHHHHHHcC
Confidence 9999999553
No 30
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.74 E-value=5.4e-18 Score=169.76 Aligned_cols=114 Identities=25% Similarity=0.258 Sum_probs=94.6
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETAT 86 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~V 86 (655)
+..|.||||+||..|+.++++.||+.+ ++++.++...|+||||+|+..|+.++|
T Consensus 155 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g--------------------------~~~~~~~~~~g~tpL~~A~~~~~~~~v 208 (282)
T 1oy3_D 155 NYDGHTPLHVAVIHKDAEMVRLLRDAG--------------------------ADLNKPEPTCGRTPLHLAVEAQAASVL 208 (282)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHT--------------------------CCTTCCCTTTCCCHHHHHHHTTCHHHH
T ss_pred CCCCcCHHHHHHHcCCHHHHHHHHHcC--------------------------CCCCCCCCCCCcCHHHHHHHcCCHHHH
Confidence 567999999999999999999999873 568887742499999999999999999
Q ss_pred HHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHh
Q 006231 87 EMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMR 146 (655)
Q Consensus 87 klLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~ 146 (655)
++||++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+.++.-.
T Consensus 209 ~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~ 268 (282)
T 1oy3_D 209 ELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSD 268 (282)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC-------------
T ss_pred HHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCc
Confidence 999999999999999999999999999999999999999999999999999999998743
No 31
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.73 E-value=5.5e-18 Score=169.24 Aligned_cols=114 Identities=17% Similarity=0.138 Sum_probs=103.0
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccC--------------CCCCCcH
Q 006231 8 KYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRD--------------VPNRDTP 73 (655)
Q Consensus 8 k~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD--------------~p~G~TP 73 (655)
..|+||||+||..|+.++++.||+.+ ++++.+| . .|.||
T Consensus 91 ~~g~t~L~~A~~~g~~~~v~~Ll~~g--------------------------a~~~~~~~~~~~~~~~~~~~~~-~g~tp 143 (260)
T 3jxi_A 91 YRGQTALHIAIERRCKHYVELLVEKG--------------------------ADVHAQARGRFFQPKDEGGYFY-FGELP 143 (260)
T ss_dssp EESBCHHHHHHHTTCHHHHHHHHHTT--------------------------CCTTCCCEECCCSSSCCCCSCC-SCSSH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhCC--------------------------CCcCccccccccCccccccccc-CCCCH
Confidence 37999999999999999999999974 4466555 5 79999
Q ss_pred HHHHHHcCChhHHHHHHh---cCCCCcccCCCCCChHHHHHHcCC---------HHHHHHHHHhcCCh-------hHhhh
Q 006231 74 LHLAVKLGDETATEMLMV---AGADWSLQNEQGWSALQEAICSRE---------EGIAMIIVRHYQPL-------AWAKW 134 (655)
Q Consensus 74 LHlAv~~G~le~VklLL~---~GADvn~~n~~G~TpLh~A~~~G~---------~eIV~lLL~~ga~~-------~~~d~ 134 (655)
||+|+..|+.++|++||+ +|++++.+|..|+||||+|+..|+ .+++++|+++|+++ +..+.
T Consensus 144 L~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~ 223 (260)
T 3jxi_A 144 LSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNN 223 (260)
T ss_dssp HHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCT
T ss_pred HHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccC
Confidence 999999999999999999 999999999999999999999888 79999999999988 67889
Q ss_pred cCCcchHHHHHhhc
Q 006231 135 CRRLPRLVGTMRRM 148 (655)
Q Consensus 135 ~g~tPl~lAaL~~~ 148 (655)
.|.||+++|+....
T Consensus 224 ~g~tpL~~A~~~g~ 237 (260)
T 3jxi_A 224 DGLSPLMMAAKTGK 237 (260)
T ss_dssp TSCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCC
Confidence 99999999995543
No 32
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.73 E-value=1.2e-17 Score=167.15 Aligned_cols=86 Identities=21% Similarity=0.275 Sum_probs=70.9
Q ss_pred ccccccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCcccCC-CCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCc
Q 006231 60 AAIDRRDVPNRDTPLHLAVKLGDETATEMLMVAGADWSLQNE-QGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRL 138 (655)
Q Consensus 60 A~In~kD~p~G~TPLHlAv~~G~le~VklLL~~GADvn~~n~-~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~t 138 (655)
++++.+|. .|.||||+|+..|+.++|++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++..+..|.|
T Consensus 149 ~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t 227 (282)
T 1oy3_D 149 LQLEAENY-DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRT 227 (282)
T ss_dssp GGTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred hcCCCcCC-CCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCC
Confidence 44677776 888888888888888888888888888888875 4888888888888888888888888888888888888
Q ss_pred chHHHHHh
Q 006231 139 PRLVGTMR 146 (655)
Q Consensus 139 Pl~lAaL~ 146 (655)
|+++|+..
T Consensus 228 pL~~A~~~ 235 (282)
T 1oy3_D 228 PLGSALLR 235 (282)
T ss_dssp HHHHHHTS
T ss_pred HHHHHHHc
Confidence 88888833
No 33
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.73 E-value=6.2e-18 Score=164.64 Aligned_cols=139 Identities=19% Similarity=0.203 Sum_probs=101.8
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcC--CCCC-CchhhhhhhhHhHHHH------hhhhccccccccCCCCCCcHHHH
Q 006231 6 VSKYAHSPVHKAIAMRDYPSLRRLLAGL--PRLS-NPAEIRTEMASLAEEE------KADAISAAIDRRDVPNRDTPLHL 76 (655)
Q Consensus 6 ~nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~--p~l~-dp~~i~te~~saa~e~------~~~~igA~In~kD~p~G~TPLHl 76 (655)
.+..|.||||+|+..|+.++++.|++.+ .... ......|.++.+.... .....|++++.+|. .|.||||+
T Consensus 68 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~ 146 (228)
T 2dzn_A 68 PDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDK-FNQIPLHR 146 (228)
T ss_dssp CCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT-TSCCHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCC-CCCCHHHH
Confidence 4668999999999999999999999875 3221 1122334444433221 12224677777776 78888888
Q ss_pred HHHcCChhHHHHHHhcC-CCCcccCCCCCChHHHHHHcCCHHHHHHHH-HhcCChhHhhhcCCcchHHHHH
Q 006231 77 AVKLGDETATEMLMVAG-ADWSLQNEQGWSALQEAICSREEGIAMIIV-RHYQPLAWAKWCRRLPRLVGTM 145 (655)
Q Consensus 77 Av~~G~le~VklLL~~G-ADvn~~n~~G~TpLh~A~~~G~~eIV~lLL-~~ga~~~~~d~~g~tPl~lAaL 145 (655)
|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+ ++|++++..+..|.||+++|.-
T Consensus 147 A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 147 AASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN 217 (228)
T ss_dssp HHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSS
T ss_pred HHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHH
Confidence 88888888888888888 888888888888888888888888888888 7788887777788888887753
No 34
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.73 E-value=7.1e-18 Score=176.54 Aligned_cols=137 Identities=13% Similarity=0.039 Sum_probs=115.6
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCC-CchhhhhhhhHhHHHH----------hhhhccccccccCCCCCCcHHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLS-NPAEIRTEMASLAEEE----------KADAISAAIDRRDVPNRDTPLH 75 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~-dp~~i~te~~saa~e~----------~~~~igA~In~kD~p~G~TPLH 75 (655)
+.+|.||||+||..|+.++++.||+.+.... ......|.++.++... ......++++.+|. .|+||||
T Consensus 128 d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~-~g~tpLh 206 (327)
T 1sw6_A 128 DEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDS-MNRTILH 206 (327)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECT-TCCCHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCC-CCCCHHH
Confidence 4579999999999999999999999875431 1234557777766532 22223478999998 9999999
Q ss_pred HHHH----cCChhHHHHHHhcCC---------------------------------------------CCcccCCCCCCh
Q 006231 76 LAVK----LGDETATEMLMVAGA---------------------------------------------DWSLQNEQGWSA 106 (655)
Q Consensus 76 lAv~----~G~le~VklLL~~GA---------------------------------------------Dvn~~n~~G~Tp 106 (655)
+|+. .|+.+++++|++.++ +++.+|..|+||
T Consensus 207 ~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~Tp 286 (327)
T 1sw6_A 207 HIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTC 286 (327)
T ss_dssp HHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCH
T ss_pred HHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCH
Confidence 9999 899999999998753 688889999999
Q ss_pred HHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHH
Q 006231 107 LQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGT 144 (655)
Q Consensus 107 Lh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAa 144 (655)
||+|+..|+.+++++|+++|++++..+..|+||+++|+
T Consensus 287 Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~ 324 (327)
T 1sw6_A 287 LNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 324 (327)
T ss_dssp HHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999986
No 35
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.73 E-value=1.2e-17 Score=163.56 Aligned_cols=85 Identities=19% Similarity=0.155 Sum_probs=77.7
Q ss_pred cccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCcccCC-------------CCCChHHHHHHcCCHHHHHHHHHhcCCh
Q 006231 63 DRRDVPNRDTPLHLAVKLGDETATEMLMVAGADWSLQNE-------------QGWSALQEAICSREEGIAMIIVRHYQPL 129 (655)
Q Consensus 63 n~kD~p~G~TPLHlAv~~G~le~VklLL~~GADvn~~n~-------------~G~TpLh~A~~~G~~eIV~lLL~~ga~~ 129 (655)
+.+|. .|.||||+|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|+++
T Consensus 69 ~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 147 (232)
T 2rfa_A 69 TSELY-EGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI 147 (232)
T ss_dssp CSTTT-TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred cccCC-CCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 66776 899999999999999999999999999998876 7999999999999999999999999999
Q ss_pred hHhhhcCCcchHHHHHhhc
Q 006231 130 AWAKWCRRLPRLVGTMRRM 148 (655)
Q Consensus 130 ~~~d~~g~tPl~lAaL~~~ 148 (655)
+..+..|.||+|+|+....
T Consensus 148 ~~~d~~g~t~L~~A~~~~~ 166 (232)
T 2rfa_A 148 RAQDSLGNTVLHILILQPN 166 (232)
T ss_dssp TCCCTTSCCHHHHHHTCSC
T ss_pred CCCCCCCCCHHHHHHHcCC
Confidence 9999999999999995543
No 36
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.73 E-value=1.3e-17 Score=156.84 Aligned_cols=90 Identities=23% Similarity=0.235 Sum_probs=85.1
Q ss_pred hccccccccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcC
Q 006231 57 AISAAIDRRDVPNRDTPLHLAVKLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCR 136 (655)
Q Consensus 57 ~igA~In~kD~p~G~TPLHlAv~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g 136 (655)
..|++++.+|. .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|
T Consensus 35 ~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g 113 (169)
T 2y1l_E 35 ANGADVNAEDA-SGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEG 113 (169)
T ss_dssp HTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Confidence 35788999997 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchHHHHHhh
Q 006231 137 RLPRLVGTMRR 147 (655)
Q Consensus 137 ~tPl~lAaL~~ 147 (655)
.||+++|+...
T Consensus 114 ~t~L~~A~~~~ 124 (169)
T 2y1l_E 114 HTPLHLAAMFG 124 (169)
T ss_dssp CCHHHHHHHTT
T ss_pred CCHHHHHHHcC
Confidence 99999999553
No 37
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.72 E-value=1.1e-17 Score=155.92 Aligned_cols=88 Identities=22% Similarity=0.260 Sum_probs=82.2
Q ss_pred cccccccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCc
Q 006231 59 SAAIDRRDVPNRDTPLHLAVKLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRL 138 (655)
Q Consensus 59 gA~In~kD~p~G~TPLHlAv~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~t 138 (655)
+.+++..|. .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.|
T Consensus 32 ~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 110 (165)
T 3twr_A 32 SVNCRDIEG-RQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFT 110 (165)
T ss_dssp TTTCCCTTT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred CCCcccccc-CCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCC
Confidence 356677786 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHhh
Q 006231 139 PRLVGTMRR 147 (655)
Q Consensus 139 Pl~lAaL~~ 147 (655)
|+|+|+...
T Consensus 111 ~L~~A~~~~ 119 (165)
T 3twr_A 111 PLHEAAAKG 119 (165)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999999553
No 38
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.72 E-value=1.5e-17 Score=167.56 Aligned_cols=138 Identities=14% Similarity=0.105 Sum_probs=88.2
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCC-CchhhhhhhhHhHHHHhhh------hccccccccCCCCCCcHHHHHHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLS-NPAEIRTEMASLAEEEKAD------AISAAIDRRDVPNRDTPLHLAVK 79 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~-dp~~i~te~~saa~e~~~~------~igA~In~kD~p~G~TPLHlAv~ 79 (655)
+..|.||||+||..|+.++++.||+.+.... ......|.++.++.....+ ..|++++..+ .|.||||+|+.
T Consensus 33 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~g~t~L~~A~~ 110 (261)
T 2xai_A 33 TADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES--DLASPIHEAAR 110 (261)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC--TTCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC--CCCCHHHHHHH
Confidence 3467777777777777777777777654321 1222344455444332222 2345555433 47777777777
Q ss_pred cCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 80 LGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 80 ~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++. +..|.||+|+|+...
T Consensus 111 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~ 177 (261)
T 2xai_A 111 RGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTA 177 (261)
T ss_dssp TTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHT
T ss_pred cCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcC
Confidence 7777777777777777777777777777777777777777777777777663 566777777776553
No 39
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.72 E-value=3.4e-17 Score=156.60 Aligned_cols=140 Identities=15% Similarity=0.200 Sum_probs=99.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCC-chhhhhhhhHhHHHHhh-------hhccccccccCCCCCCcHHHHHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSN-PAEIRTEMASLAEEEKA-------DAISAAIDRRDVPNRDTPLHLAV 78 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~d-p~~i~te~~saa~e~~~-------~~igA~In~kD~p~G~TPLHlAv 78 (655)
+..|.||||+||..|+.++++.||+.+..... .....+.++.++..... ...+++++..|. .|.||||+|+
T Consensus 36 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~L~~A~ 114 (201)
T 3hra_A 36 DTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNR-YGGNALIPAA 114 (201)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCT-TSCCSHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccC-CCCcHHHHHH
Confidence 45778888888888888888888887644211 12233444443332211 123456777776 7888888888
Q ss_pred HcCChhHHHHHHhcC-CCCcccCCCCCChHHHHHHcCC-----HHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 79 KLGDETATEMLMVAG-ADWSLQNEQGWSALQEAICSRE-----EGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 79 ~~G~le~VklLL~~G-ADvn~~n~~G~TpLh~A~~~G~-----~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
..|+.+++++|+++| ++++.+|..|+||||+|+..++ .+++++|+++|++++..+..|.||+++|+...
T Consensus 115 ~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 189 (201)
T 3hra_A 115 EKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKG 189 (201)
T ss_dssp HTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred HcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcC
Confidence 888888888888887 7888888888888888887777 77888888888888777778888888887553
No 40
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.72 E-value=2.9e-18 Score=166.58 Aligned_cols=113 Identities=10% Similarity=-0.046 Sum_probs=98.1
Q ss_pred CCCChHHHHHHHcCCH----HHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCC-
Q 006231 8 KYAHSPVHKAIAMRDY----PSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGD- 82 (655)
Q Consensus 8 k~G~TPLH~Aa~~Gd~----~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~- 82 (655)
.+|+||||+|+.+|+. ++++.||+. |+++|.+|. .|+||||+|+..|+
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~--------------------------Gadvn~~d~-~g~TpLh~a~~~~~~ 88 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINK--------------------------GADIKSRTK-EGTTLFFPLFQGGGN 88 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHT--------------------------TCCSSCCCT-TCCCTHHHHHHHCTT
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHC--------------------------CCCCCCCCC-CCCcHHHHHHHcCCc
Confidence 3578888888888764 367777776 578999997 99999999999997
Q ss_pred -----hhHHHHHHhcCCCCcccCCCCC-ChHHHHHHcC-----CHHHHHHHHH-hcCChhHhhhcCCcchHHHHHhh
Q 006231 83 -----ETATEMLMVAGADWSLQNEQGW-SALQEAICSR-----EEGIAMIIVR-HYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 83 -----le~VklLL~~GADvn~~n~~G~-TpLh~A~~~G-----~~eIV~lLL~-~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
.+++++||++|||+|.+|..|+ ||||+|+..+ +.+++++|+. +|++++..+..|+||+++|+...
T Consensus 89 ~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~ 165 (186)
T 3t8k_A 89 DITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQ 165 (186)
T ss_dssp CHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTT
T ss_pred chhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcC
Confidence 5789999999999999999999 9999999954 3569999999 99999999999999999998443
No 41
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.72 E-value=3.8e-17 Score=159.05 Aligned_cols=141 Identities=13% Similarity=0.092 Sum_probs=112.2
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCCCC--C--CchhhhhhhhHhHHHHhh------hhcc--ccccccCCCCCCcH
Q 006231 6 VSKYAHSPVHKAIAMRDYPSLRRLLAGLPRL--S--NPAEIRTEMASLAEEEKA------DAIS--AAIDRRDVPNRDTP 73 (655)
Q Consensus 6 ~nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l--~--dp~~i~te~~saa~e~~~------~~ig--A~In~kD~p~G~TP 73 (655)
.+..|.||||+|+..|+.++++.|++.+... . ......|.++.+...... ...| ++++..|. .|.||
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~-~g~t~ 110 (228)
T 2dzn_A 32 KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITN-QGVTC 110 (228)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCT-TCCCH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCc-CCCCH
Confidence 4678899999999999999999999986321 1 112334555555433222 2234 77888887 89999
Q ss_pred HHHHHHcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhc-CChhHhhhcCCcchHHHHHhh
Q 006231 74 LHLAVKLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHY-QPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 74 LHlAv~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~g-a~~~~~d~~g~tPl~lAaL~~ 147 (655)
||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++ ++++..+..|.||+++|+...
T Consensus 111 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~ 185 (228)
T 2dzn_A 111 LHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEG 185 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999988 888888889999999998543
No 42
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.72 E-value=4.1e-17 Score=163.30 Aligned_cols=140 Identities=20% Similarity=0.193 Sum_probs=117.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCC-chhhhhhhhHhHHHHhhhh------ccc-cccccCCCCCCcHHHHHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSN-PAEIRTEMASLAEEEKADA------ISA-AIDRRDVPNRDTPLHLAV 78 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~d-p~~i~te~~saa~e~~~~~------igA-~In~kD~p~G~TPLHlAv 78 (655)
+..|.||||+||..|+.++++.||+.+..... .....|.++.+........ .++ +++.+|. .|.||||+|+
T Consensus 54 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-~g~t~L~~A~ 132 (253)
T 1yyh_A 54 DRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMH-DGTTPLILAA 132 (253)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCT-TCCCHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCC-CCCcHHHHHH
Confidence 67899999999999999999999998654321 2334466665554332222 233 7888887 9999999999
Q ss_pred HcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 79 KLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 79 ~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+...
T Consensus 133 ~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~ 201 (253)
T 1yyh_A 133 RLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREG 201 (253)
T ss_dssp HHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred HcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCC
Confidence 999999999999999999999999999999999999999999999999999999999999999998554
No 43
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.72 E-value=3.4e-17 Score=159.21 Aligned_cols=141 Identities=18% Similarity=0.181 Sum_probs=115.8
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCC--CchhhhhhhhHhHHHHh------hhhccccccccCCCCCCcHHHHHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLS--NPAEIRTEMASLAEEEK------ADAISAAIDRRDVPNRDTPLHLAV 78 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~--dp~~i~te~~saa~e~~------~~~igA~In~kD~p~G~TPLHlAv 78 (655)
+..|.||||+|+..|+.++++.|++.++... ......+.++.++.... ....|++++.+|. .|.||||+|+
T Consensus 55 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~ 133 (223)
T 2f8y_A 55 DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDD-LGKSALHWAA 133 (223)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT-TSCBHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCC-CCCcHHHHHH
Confidence 4678999999999999999999998764211 12233445554443222 2235688999997 9999999999
Q ss_pred HcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhhc
Q 006231 79 KLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRRM 148 (655)
Q Consensus 79 ~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~~ 148 (655)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.||+++|+....
T Consensus 134 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 203 (223)
T 2f8y_A 134 AVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 203 (223)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999999889999999999985543
No 44
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.71 E-value=1.3e-17 Score=166.43 Aligned_cols=123 Identities=17% Similarity=0.141 Sum_probs=104.0
Q ss_pred CCCCChHHHHHHHc---CCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCCh
Q 006231 7 SKYAHSPVHKAIAM---RDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDE 83 (655)
Q Consensus 7 nk~G~TPLH~Aa~~---Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~l 83 (655)
+..|.||||+||.. |+.++++.||+.+....... ..+...+..+|. .|.||||+|+..|+.
T Consensus 40 d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~---------------~~~~~~~~~~d~-~g~t~L~~A~~~g~~ 103 (256)
T 2etb_A 40 GSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPK---------------PLVNAQCTDEFY-QGHSALHIAIEKRSL 103 (256)
T ss_dssp TTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSS---------------CGGGCCCCSTTT-TTCCHHHHHHHTTCH
T ss_pred CCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchh---------------hhcccccccccc-cCCCHHHHHHHcCCH
Confidence 56899999999999 99999999998742110000 001122334555 899999999999999
Q ss_pred hHHHHHHhcCCCCcccCCC-------------CCChHHHHHHcCCHHHHHHHHH---hcCChhHhhhcCCcchHHHHH
Q 006231 84 TATEMLMVAGADWSLQNEQ-------------GWSALQEAICSREEGIAMIIVR---HYQPLAWAKWCRRLPRLVGTM 145 (655)
Q Consensus 84 e~VklLL~~GADvn~~n~~-------------G~TpLh~A~~~G~~eIV~lLL~---~ga~~~~~d~~g~tPl~lAaL 145 (655)
++|++||++|++++.+|.. |+||||+|+..|+.+++++|++ ++++++..+..|+||+|+|+.
T Consensus 104 ~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~ 181 (256)
T 2etb_A 104 QCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVM 181 (256)
T ss_dssp HHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHH
Confidence 9999999999999999886 9999999999999999999999 999999999999999999996
No 45
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.71 E-value=3.5e-17 Score=155.11 Aligned_cols=114 Identities=16% Similarity=0.159 Sum_probs=103.3
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHHH
Q 006231 8 KYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETATE 87 (655)
Q Consensus 8 k~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~Vk 87 (655)
..+.++||.||..|+.++++.||+.. +.+++.+|. .|+||||+|+..|+.++++
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~-------------------------~~~~~~~~~-~g~t~L~~A~~~~~~~~v~ 56 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNT-------------------------ENDLNQGDD-HGFSPLHWACREGRSAVVE 56 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCT-------------------------TSCTTCCCT-TSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcC-------------------------cccccccCC-CCCCHHHHHHHcCcHHHHH
Confidence 35679999999999999999999874 235888887 9999999999999999999
Q ss_pred HHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 88 MLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 88 lLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
+|+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.||+|+|+...
T Consensus 57 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~ 116 (179)
T 3f6q_A 57 MLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWG 116 (179)
T ss_dssp HHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999543
No 46
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.71 E-value=1.6e-17 Score=163.08 Aligned_cols=140 Identities=18% Similarity=0.104 Sum_probs=111.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCC--CchhhhhhhhHhHHH------HhhhhccccccccCCCCCCcHHHHHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLS--NPAEIRTEMASLAEE------EKADAISAAIDRRDVPNRDTPLHLAV 78 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~--dp~~i~te~~saa~e------~~~~~igA~In~kD~p~G~TPLHlAv 78 (655)
+..|.||||+|+..|+.++++.|++.++... ......+.++.+... +.....|++++.+|. .|.||||+|+
T Consensus 74 ~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~ 152 (237)
T 3b7b_A 74 DAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDN-EENICLHWAA 152 (237)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCC-CCCCHHHHHH
Confidence 5678999999999999999999998763211 112233444444332 222335688888887 8999999999
Q ss_pred HcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 79 KLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 79 ~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+...
T Consensus 153 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~ 221 (237)
T 3b7b_A 153 FSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNS 221 (237)
T ss_dssp HHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTC
T ss_pred HCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999888899999999887543
No 47
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.71 E-value=5.1e-17 Score=159.15 Aligned_cols=144 Identities=18% Similarity=0.154 Sum_probs=115.5
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCCCC------CCchhhhhhhhHhHHHHhh------hhccccccccCC------
Q 006231 6 VSKYAHSPVHKAIAMRDYPSLRRLLAGLPRL------SNPAEIRTEMASLAEEEKA------DAISAAIDRRDV------ 67 (655)
Q Consensus 6 ~nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l------~dp~~i~te~~saa~e~~~------~~igA~In~kD~------ 67 (655)
.+..|.||||+||..|+.++++.||+.++.. .......|.++.++..... ...|++++.++.
T Consensus 33 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~ 112 (232)
T 2rfa_A 33 RGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHY 112 (232)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceee
Confidence 4788999999999999999999999876432 1112345556655443222 224677776642
Q ss_pred ------CCCCcHHHHHHHcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHH----HHHHHhcCCh------hH
Q 006231 68 ------PNRDTPLHLAVKLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIA----MIIVRHYQPL------AW 131 (655)
Q Consensus 68 ------p~G~TPLHlAv~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV----~lLL~~ga~~------~~ 131 (655)
..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++ ++|+++++.. +.
T Consensus 113 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~ 192 (232)
T 2rfa_A 113 RPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELV 192 (232)
T ss_dssp CTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGC
T ss_pred cccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhcc
Confidence 1699999999999999999999999999999999999999999999999988 9999999877 47
Q ss_pred hhhcCCcchHHHHHhhcc
Q 006231 132 AKWCRRLPRLVGTMRRMR 149 (655)
Q Consensus 132 ~d~~g~tPl~lAaL~~~~ 149 (655)
.+..|.||+++|+.....
T Consensus 193 ~~~~g~tpl~~A~~~g~~ 210 (232)
T 2rfa_A 193 PNNQGLTPFKLAGVEGNI 210 (232)
T ss_dssp CCTTSCCHHHHHHHHTCH
T ss_pred CCCCCCCHHHHHHHcCCH
Confidence 788999999999966543
No 48
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.71 E-value=1.5e-17 Score=165.94 Aligned_cols=109 Identities=16% Similarity=0.139 Sum_probs=102.3
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHHH
Q 006231 8 KYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETATE 87 (655)
Q Consensus 8 k~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~Vk 87 (655)
..|.||||+||..|+.++++.||+. |+++|.+|. .|+||||+||..|+.++|+
T Consensus 19 ~~~~t~L~~A~~~g~~~~v~~Ll~~--------------------------g~~~~~~d~-~g~tpLh~A~~~g~~~~v~ 71 (229)
T 2vge_A 19 LNPLVLLLDAALTGELEVVQQAVKE--------------------------MNDPSQPNE-EGITALHNAICGANYSIVD 71 (229)
T ss_dssp SCHHHHHHHHHHHTCHHHHHHHHHH--------------------------SSCTTCCCT-TSCCHHHHHHHTTCHHHHH
T ss_pred cchhHHHHHHHHcCCHHHHHHHHhc--------------------------CCCCCCCCC-CCCCHHHHHHHcCCHHHHH
Confidence 4567899999999999999999987 356888997 9999999999999999999
Q ss_pred HHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhh-hcCCcchHHH
Q 006231 88 MLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAK-WCRRLPRLVG 143 (655)
Q Consensus 88 lLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d-~~g~tPl~lA 143 (655)
+||++|++++.+|..|+||||+|+..|+.+++++|++++++++..+ ..|.||+++|
T Consensus 72 ~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A 128 (229)
T 2vge_A 72 FLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKC 128 (229)
T ss_dssp HHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGC
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHH
Confidence 9999999999999999999999999999999999999999998876 5999999998
No 49
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.71 E-value=3.5e-17 Score=153.55 Aligned_cols=111 Identities=20% Similarity=0.204 Sum_probs=102.2
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHHHHH
Q 006231 10 AHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETATEML 89 (655)
Q Consensus 10 G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~VklL 89 (655)
+.+|||+||..|+.+.++.||..++ ..++.+|. .|+||||+|+..|+.+++++|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~-------------------------~~~~~~~~-~g~t~L~~A~~~~~~~~v~~L 55 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGD-------------------------NLVNKPDE-RGFTPLIWASAFGEIETVRFL 55 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCS-------------------------GGGGCCCT-TSCCHHHHHHHTTCHHHHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCc-------------------------ccccCCCC-CCCCHHHHHHHcCCHHHHHHH
Confidence 4689999999999999999998742 13778887 999999999999999999999
Q ss_pred HhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHh
Q 006231 90 MVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMR 146 (655)
Q Consensus 90 L~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~ 146 (655)
+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.||+|+|+..
T Consensus 56 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 112 (172)
T 3v30_A 56 LEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRG 112 (172)
T ss_dssp HHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 999999999999999999999999999999999999999999999999999999954
No 50
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.71 E-value=3.1e-17 Score=165.46 Aligned_cols=130 Identities=15% Similarity=0.043 Sum_probs=102.9
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhH
Q 006231 6 VSKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETA 85 (655)
Q Consensus 6 ~nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~ 85 (655)
.+..|.||||+||..|+.++++.||+.+.......... .......+..+. .|.||||+|+..|+.++
T Consensus 97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~------------~~~~~~~~~~~~-~g~tpL~~A~~~g~~~~ 163 (273)
T 2pnn_A 97 SYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGD------------FFKKTKGRPGFY-FGELPLSLAACTNQLAI 163 (273)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSG------------GGSSCSSSCCCC-SCBSHHHHHHHTTCHHH
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcccccc------------cccccccccccc-CCCCHHHHHHHcCCHHH
Confidence 45689999999999999999999999853210000000 000001222233 69999999999999999
Q ss_pred HHHHHh---cCCCCcccCCCCCChHHHHHHcCC---------HHHHHHHHHhcCChh-------HhhhcCCcchHHHHHh
Q 006231 86 TEMLMV---AGADWSLQNEQGWSALQEAICSRE---------EGIAMIIVRHYQPLA-------WAKWCRRLPRLVGTMR 146 (655)
Q Consensus 86 VklLL~---~GADvn~~n~~G~TpLh~A~~~G~---------~eIV~lLL~~ga~~~-------~~d~~g~tPl~lAaL~ 146 (655)
|++||+ +|++++.+|..|+||||+|+..|+ .+++++|+++|++++ ..+..|.||+++|+..
T Consensus 164 v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~ 243 (273)
T 2pnn_A 164 VKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASS 243 (273)
T ss_dssp HHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred HHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHh
Confidence 999999 999999999999999999999998 799999999998885 4788999999999955
Q ss_pred hc
Q 006231 147 RM 148 (655)
Q Consensus 147 ~~ 148 (655)
..
T Consensus 244 g~ 245 (273)
T 2pnn_A 244 GK 245 (273)
T ss_dssp TC
T ss_pred Ch
Confidence 43
No 51
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.70 E-value=2.3e-17 Score=152.80 Aligned_cols=89 Identities=12% Similarity=0.168 Sum_probs=84.0
Q ss_pred hccccccccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcC
Q 006231 57 AISAAIDRRDVPNRDTPLHLAVKLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCR 136 (655)
Q Consensus 57 ~igA~In~kD~p~G~TPLHlAv~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g 136 (655)
..|++++.+|. .|+||||+|+. |+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|
T Consensus 26 ~~~~~~~~~~~-~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 103 (162)
T 1ihb_A 26 QNNVNVNAQNG-FGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEG 103 (162)
T ss_dssp TSCCCTTCCCT-TSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred hCCCCccccCc-cCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 35788999997 99999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred CcchHHHHHhh
Q 006231 137 RLPRLVGTMRR 147 (655)
Q Consensus 137 ~tPl~lAaL~~ 147 (655)
.||+|+|+...
T Consensus 104 ~t~L~~A~~~~ 114 (162)
T 1ihb_A 104 NLPLHLAAKEG 114 (162)
T ss_dssp CCHHHHHHHTT
T ss_pred CCHHHHHHHcC
Confidence 99999999554
No 52
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.70 E-value=1.2e-16 Score=155.40 Aligned_cols=140 Identities=20% Similarity=0.193 Sum_probs=114.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCC-chhhhhhhhHhHHHHhhhh------ccc-cccccCCCCCCcHHHHHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSN-PAEIRTEMASLAEEEKADA------ISA-AIDRRDVPNRDTPLHLAV 78 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~d-p~~i~te~~saa~e~~~~~------igA-~In~kD~p~G~TPLHlAv 78 (655)
+..|.||||+||..|+.++++.||+.+..... .....|.++.++.....+. .++ +++..|. .|.||||+|+
T Consensus 22 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-~g~t~L~~A~ 100 (223)
T 2f8y_A 22 DRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMH-DGTTPLILAA 100 (223)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCT-TCCCHHHHHH
T ss_pred CCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-CCCcHHHHHH
Confidence 56799999999999999999999998644321 1233455555544322222 233 7788887 8999999999
Q ss_pred HcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 79 KLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 79 ~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.||+++|+...
T Consensus 101 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 169 (223)
T 2f8y_A 101 RLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREG 169 (223)
T ss_dssp HHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred HhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999999988899999999998554
No 53
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.70 E-value=2.4e-17 Score=161.58 Aligned_cols=139 Identities=23% Similarity=0.192 Sum_probs=105.2
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCC----CC-CCchhhhhhhhHhHHHHh------hhhccccccccC-CCCCCcHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLP----RL-SNPAEIRTEMASLAEEEK------ADAISAAIDRRD-VPNRDTPL 74 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p----~l-~dp~~i~te~~saa~e~~------~~~igA~In~kD-~p~G~TPL 74 (655)
+..|.||||+|+..|+.++++.|++.++ .. .......+.++.+..... ....|++++..| . .|.|||
T Consensus 76 ~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-~g~t~L 154 (241)
T 1k1a_A 76 DRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIK-SGRSPL 154 (241)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-TCCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccc-CCCcHH
Confidence 5678999999999999999999998764 11 111223344444433222 222567777777 4 788888
Q ss_pred HHHHHcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHh
Q 006231 75 HLAVKLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMR 146 (655)
Q Consensus 75 HlAv~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~ 146 (655)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..
T Consensus 155 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 226 (241)
T 1k1a_A 155 IHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSR 226 (241)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhc
Confidence 888888888888888888888888888888888888888888888888888888888888888888887744
No 54
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.70 E-value=8.9e-18 Score=156.19 Aligned_cols=108 Identities=19% Similarity=0.106 Sum_probs=87.0
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCc-HHHHHHHcCChhH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDT-PLHLAVKLGDETA 85 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~T-PLHlAv~~G~le~ 85 (655)
+..|.||||+|+ .|+.++++.||+. |++++.+|. .|+| |||+|+..|+.++
T Consensus 42 ~~~g~t~L~~A~-~~~~~~v~~Ll~~--------------------------g~~~~~~d~-~g~ttpL~~A~~~~~~~~ 93 (156)
T 1bi7_B 42 NSYGRRPIQVMM-MGSARVAELLLLH--------------------------GAEPNCADP-ATLTRPVHDAAREGFLDT 93 (156)
T ss_dssp CSSSCCTTTSSC-TTCHHHHHHHHTT--------------------------TCCCCCCCT-TTCCCHHHHHHHHTCHHH
T ss_pred CCCCCCHHHHHH-cCCHHHHHHHHHc--------------------------CCCCCCcCC-CCCcHHHHHHHHCCCHHH
Confidence 467899999985 9999999999987 456899997 9999 9999999999999
Q ss_pred HHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHH
Q 006231 86 TEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLV 142 (655)
Q Consensus 86 VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~l 142 (655)
+++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.+|..-
T Consensus 94 v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~ 150 (156)
T 1bi7_B 94 LVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEG 150 (156)
T ss_dssp HHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------------
T ss_pred HHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCccccc
Confidence 999999999999999999999999999999999999999999999999999988763
No 55
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.70 E-value=5.1e-17 Score=158.80 Aligned_cols=137 Identities=18% Similarity=0.136 Sum_probs=108.0
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCC-chhhhhhhhHhHHHH------hhhhccccccccCCCCCCcHHHHHHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSN-PAEIRTEMASLAEEE------KADAISAAIDRRDVPNRDTPLHLAVK 79 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~d-p~~i~te~~saa~e~------~~~~igA~In~kD~p~G~TPLHlAv~ 79 (655)
+..|.||||+|+..|+.++++.|++.+..... .....|.++.+.... .....|++++.+|. .|.||||+|+.
T Consensus 70 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~ 148 (231)
T 3aji_A 70 DDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDH-YDATAMHRAAA 148 (231)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHH
Confidence 46789999999999999999999998654321 122334444443322 22235677888886 88899999998
Q ss_pred cCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHH
Q 006231 80 LGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGT 144 (655)
Q Consensus 80 ~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAa 144 (655)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+
T Consensus 149 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 213 (231)
T 3aji_A 149 KGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAK 213 (231)
T ss_dssp HTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSC
T ss_pred cCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 89999999999899988888888899999999888989999988888888888888889988875
No 56
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.70 E-value=6.2e-17 Score=165.75 Aligned_cols=139 Identities=14% Similarity=0.100 Sum_probs=94.0
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCC-CchhhhhhhhHhHHHHhhh------hccccccccCCCCCCcHHHHHHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLS-NPAEIRTEMASLAEEEKAD------AISAAIDRRDVPNRDTPLHLAVK 79 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~-dp~~i~te~~saa~e~~~~------~igA~In~kD~p~G~TPLHlAv~ 79 (655)
+..|.||||+||..|+.++++.||+.+.... ......|.++.++.....+ ..|++++..+ .|.||||+|+.
T Consensus 89 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~g~t~L~~A~~ 166 (285)
T 3d9h_A 89 TADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES--DLASPIHEAAR 166 (285)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC--TTSCHHHHHHH
T ss_pred CCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC--CCCCHHHHHHH
Confidence 4567888888888888888888887654321 1223344555444322222 2345555444 47788888888
Q ss_pred cCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhhc
Q 006231 80 LGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRRM 148 (655)
Q Consensus 80 ~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~~ 148 (655)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++. +..|.||+++|+....
T Consensus 167 ~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~ 234 (285)
T 3d9h_A 167 RGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTAS 234 (285)
T ss_dssp HTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTC
T ss_pred cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCC
Confidence 8888888888888888877777788888888888888888888877777763 6677788877765543
No 57
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.70 E-value=9.3e-17 Score=156.94 Aligned_cols=87 Identities=18% Similarity=0.257 Sum_probs=57.4
Q ss_pred cccccccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCc
Q 006231 59 SAAIDRRDVPNRDTPLHLAVKLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRL 138 (655)
Q Consensus 59 gA~In~kD~p~G~TPLHlAv~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~t 138 (655)
|++++.+|. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++.+++..+..|.|
T Consensus 63 g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 141 (231)
T 3aji_A 63 GVPVNDKDD-AGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDAT 141 (231)
T ss_dssp TCCSCCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCCCCCcCC-CCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCc
Confidence 445666665 6666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred chHHHHHh
Q 006231 139 PRLVGTMR 146 (655)
Q Consensus 139 Pl~lAaL~ 146 (655)
|+++|+..
T Consensus 142 ~L~~A~~~ 149 (231)
T 3aji_A 142 AMHRAAAK 149 (231)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 66666643
No 58
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.69 E-value=3e-17 Score=163.87 Aligned_cols=123 Identities=17% Similarity=0.123 Sum_probs=105.4
Q ss_pred CCCChHHHHHH---HcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChh
Q 006231 8 KYAHSPVHKAI---AMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDET 84 (655)
Q Consensus 8 k~G~TPLH~Aa---~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le 84 (655)
..|.||||+|+ ..|+.++++.||+.+... ..+ ...+...++..|. .|+||||+||..|+.+
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~---~~~------------~~~~~~~~~~~d~-~g~t~L~~A~~~g~~~ 107 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKT---GNM------------REFINSPFRDVYY-RGQTALHIAIERRCKH 107 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHT---TCH------------HHHHTCCBCCSSE-ESBCHHHHHHHTTCHH
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccc---cch------------Hhhhccccccccc-CCCCHHHHHHHcCCHH
Confidence 67999999999 569999999999864110 000 0012345777776 8999999999999999
Q ss_pred HHHHHHhcCCCCcccC--------------CCCCChHHHHHHcCCHHHHHHHHH---hcCChhHhhhcCCcchHHHHHh
Q 006231 85 ATEMLMVAGADWSLQN--------------EQGWSALQEAICSREEGIAMIIVR---HYQPLAWAKWCRRLPRLVGTMR 146 (655)
Q Consensus 85 ~VklLL~~GADvn~~n--------------~~G~TpLh~A~~~G~~eIV~lLL~---~ga~~~~~d~~g~tPl~lAaL~ 146 (655)
+|++||++|++++.++ ..|+||||+|+..|+.+++++|++ ++++++..+..|+||+|+|+..
T Consensus 108 ~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~ 186 (260)
T 3jxi_A 108 YVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAI 186 (260)
T ss_dssp HHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHh
Confidence 9999999999999998 689999999999999999999999 9999999999999999999954
No 59
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.69 E-value=4.9e-17 Score=164.04 Aligned_cols=124 Identities=15% Similarity=0.143 Sum_probs=104.9
Q ss_pred CCCCChHHHHHHHc---CCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCCh
Q 006231 7 SKYAHSPVHKAIAM---RDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDE 83 (655)
Q Consensus 7 nk~G~TPLH~Aa~~---Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~l 83 (655)
+..|.||||+||.. |+.++++.||+.+... ..+. ..+.+.+...|. .|.||||+|+..|+.
T Consensus 51 ~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~---~~~~------------~~i~~~~~~~d~-~g~tpL~~A~~~g~~ 114 (273)
T 2pnn_A 51 PETGKTCLLKAMLNLHNGQNDTIALLLDVARKT---DSLK------------QFVNASYTDSYY-KGQTALHIAIERRNM 114 (273)
T ss_dssp TTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHT---TCHH------------HHHTCCCCSTTT-TTCCHHHHHHHTTCH
T ss_pred CcCCCCHHHHHHHHHhcCChHHHHHHHHhhccc---cchh------------HHhhcccccccC-CCCCHHHHHHHcCCH
Confidence 67899999999987 9999999999874110 0000 001223444676 899999999999999
Q ss_pred hHHHHHHhcCCCCcccCC--------------CCCChHHHHHHcCCHHHHHHHHH---hcCChhHhhhcCCcchHHHHHh
Q 006231 84 TATEMLMVAGADWSLQNE--------------QGWSALQEAICSREEGIAMIIVR---HYQPLAWAKWCRRLPRLVGTMR 146 (655)
Q Consensus 84 e~VklLL~~GADvn~~n~--------------~G~TpLh~A~~~G~~eIV~lLL~---~ga~~~~~d~~g~tPl~lAaL~ 146 (655)
++|++||++|++++.++. .|+||||+|+..|+.+++++|++ ++++++..+..|+||||+|+..
T Consensus 115 ~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~ 194 (273)
T 2pnn_A 115 TLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEV 194 (273)
T ss_dssp HHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHc
Confidence 999999999999999987 79999999999999999999999 9999999999999999999954
No 60
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.69 E-value=4.4e-17 Score=171.15 Aligned_cols=114 Identities=19% Similarity=0.195 Sum_probs=107.3
Q ss_pred CCCCChHHHHHHHcC--CHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChh
Q 006231 7 SKYAHSPVHKAIAMR--DYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDET 84 (655)
Q Consensus 7 nk~G~TPLH~Aa~~G--d~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le 84 (655)
+..|.||||+|+..| +.++++.||+. |++++.+|. .|+||||+|+..|+.+
T Consensus 135 ~~~g~t~L~~A~~~g~~~~~~v~~Ll~~--------------------------ga~~~~~d~-~g~t~L~~A~~~g~~~ 187 (364)
T 3ljn_A 135 HCKGQTALHWCVGLGPEYLEMIKILVQL--------------------------GASPTAKDK-ADETPLMRAMEFRNRE 187 (364)
T ss_dssp EESCCCHHHHHHHSCGGGHHHHHHHHHH--------------------------TCCTTCCCT-TSCCHHHHHHHTTCHH
T ss_pred CCCCCCHHHHHHHcCCchHHHHHHHHHc--------------------------CCCCcccCC-CCCCHHHHHHHcCCHH
Confidence 457899999999999 99999999997 466899997 9999999999999999
Q ss_pred HHHHHHhcCCC-----CcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 85 ATEMLMVAGAD-----WSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 85 ~VklLL~~GAD-----vn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
+|++||++|++ ++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+...
T Consensus 188 ~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g 255 (364)
T 3ljn_A 188 ALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAA 255 (364)
T ss_dssp HHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTC
T ss_pred HHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhC
Confidence 99999999999 9999999999999999999999999999999999999999999999999553
No 61
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.69 E-value=5.5e-17 Score=159.92 Aligned_cols=139 Identities=19% Similarity=0.160 Sum_probs=103.0
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCC-chhhhhhhhHhHHHHhhhh------cc------ccccccCCCCCCcH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSN-PAEIRTEMASLAEEEKADA------IS------AAIDRRDVPNRDTP 73 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~d-p~~i~te~~saa~e~~~~~------ig------A~In~kD~p~G~TP 73 (655)
+..|.||||+||..|+.++++.||+.+..... .....|.++.++....... .+ ..++..|. .|.||
T Consensus 42 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~-~g~t~ 120 (236)
T 1ikn_D 42 NNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNY-NGHTC 120 (236)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCT-TCCCH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCC-CCCCH
Confidence 56789999999999999999999987643211 1233444554443322222 12 22566776 78888
Q ss_pred HHHHHHcCChhHHHHHHhcCCCCcccCC-CCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHh
Q 006231 74 LHLAVKLGDETATEMLMVAGADWSLQNE-QGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMR 146 (655)
Q Consensus 74 LHlAv~~G~le~VklLL~~GADvn~~n~-~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~ 146 (655)
||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..
T Consensus 121 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 194 (236)
T 1ikn_D 121 LHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGR 194 (236)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTS
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHcc
Confidence 8888888888888888888888888887 888888888888888888888888888888888888888888733
No 62
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.69 E-value=1.2e-16 Score=145.20 Aligned_cols=93 Identities=29% Similarity=0.364 Sum_probs=87.0
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETAT 86 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~V 86 (655)
+..|.||||+||..|+.++++.||+. |++++.+|. .|.||||+|+..|+.+++
T Consensus 44 ~~~g~t~L~~A~~~~~~~~v~~Ll~~--------------------------g~~~~~~d~-~g~t~L~~A~~~~~~~~v 96 (136)
T 2jab_A 44 DEYGLTPLYLATAHGHLEIVEVLLKN--------------------------GADVNAVDA-IGFTPLHLAAFIGHLEIA 96 (136)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHT--------------------------TCCTTCCCT-TCCCHHHHHHHHTCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHc--------------------------CCCCCcCCC-CCCCHHHHHHHcCCHHHH
Confidence 46799999999999999999999987 356888997 999999999999999999
Q ss_pred HHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhc
Q 006231 87 EMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHY 126 (655)
Q Consensus 87 klLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~g 126 (655)
++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 97 ~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 97 EVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999865
No 63
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.68 E-value=3.8e-17 Score=165.89 Aligned_cols=112 Identities=20% Similarity=0.175 Sum_probs=105.0
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHHH
Q 006231 8 KYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETATE 87 (655)
Q Consensus 8 k~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~Vk 87 (655)
..|.||||+||..|+.++++.||+. |+++|..|. .|.||||+||..|+.++|+
T Consensus 38 ~~~~t~l~~A~~~g~~~~v~~Ll~~--------------------------g~~~~~~~~-~g~t~L~~A~~~g~~~~v~ 90 (299)
T 1s70_B 38 FDDGAVFLAACSSGDTEEVLRLLER--------------------------GADINYANV-DGLTALHQACIDDNVDMVK 90 (299)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHHH--------------------------CCCTTCBCT-TCCBHHHHHHHTTCHHHHH
T ss_pred cCCccHHHHHHHcCCHHHHHHHHHc--------------------------CCCCcccCC-CCCCHHHHHHHcCCHHHHH
Confidence 4567999999999999999999987 356888997 9999999999999999999
Q ss_pred HHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHh
Q 006231 88 MLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMR 146 (655)
Q Consensus 88 lLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~ 146 (655)
+|+++|++++..|..|+||||+|+..|+.+++++|++++++++..+..|.||+++|+..
T Consensus 91 ~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 149 (299)
T 1s70_B 91 FLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEE 149 (299)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSH
T ss_pred HHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999998744
No 64
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.68 E-value=8e-17 Score=165.13 Aligned_cols=112 Identities=23% Similarity=0.188 Sum_probs=92.6
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhH
Q 006231 6 VSKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETA 85 (655)
Q Consensus 6 ~nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~ 85 (655)
.+..|.||||+||..|+.++++.||+.+ ++++.. .|+||||+|+..|+.++
T Consensus 27 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--------------------------~~~~~~---~g~t~L~~A~~~g~~~~ 77 (285)
T 3kea_A 27 ADVHGHSASYYAIADNNVRLVCTLLNAG--------------------------ALKNLL---ENEFPLHQAATLEDTKI 77 (285)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTT--------------------------GGGSCC---TTCCHHHHHTTSSSCHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhCC--------------------------CCCCCC---CCCCHHHHHHHcCCHHH
Confidence 4678999999999999999999999974 345554 37888888888888888
Q ss_pred HHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcC-CcchHHHHHh
Q 006231 86 TEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCR-RLPRLVGTMR 146 (655)
Q Consensus 86 VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g-~tPl~lAaL~ 146 (655)
+++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..| .||+++|+..
T Consensus 78 v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~ 139 (285)
T 3kea_A 78 VKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVML 139 (285)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHT
T ss_pred HHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHc
Confidence 888888888888888888888888888888888888888888887777777 6888888744
No 65
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.68 E-value=8.7e-17 Score=158.49 Aligned_cols=140 Identities=17% Similarity=0.129 Sum_probs=97.2
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCCC----C-CCchhhhhhhhHhHHHHhhh------hccccccccCCCCCCcHH
Q 006231 6 VSKYAHSPVHKAIAMRDYPSLRRLLAGLPR----L-SNPAEIRTEMASLAEEEKAD------AISAAIDRRDVPNRDTPL 74 (655)
Q Consensus 6 ~nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~----l-~dp~~i~te~~saa~e~~~~------~igA~In~kD~p~G~TPL 74 (655)
.+..|.||||+||..|+.++++.||+.+.. + .......|.++.++.....+ ..|++++.+|. .|.|||
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L 82 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDF-RGNTPL 82 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCT-TCCCHH
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHH
Confidence 578899999999999999999999986532 1 11122345555554332222 24577777776 788888
Q ss_pred HHHHHcCChhHHHHHHhcCCC------CcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhh-cCCcchHHHHHh
Q 006231 75 HLAVKLGDETATEMLMVAGAD------WSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKW-CRRLPRLVGTMR 146 (655)
Q Consensus 75 HlAv~~G~le~VklLL~~GAD------vn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~-~g~tPl~lAaL~ 146 (655)
|+|+..|+.+++++|+++|++ ++..+..|+||||+|+..|+.+++++|++++++++..+. .|.||+|+|+..
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~ 161 (236)
T 1ikn_D 83 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDL 161 (236)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHc
Confidence 888888888888888887765 456677788888888888888888888888887777765 777888887744
No 66
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.68 E-value=1.2e-16 Score=160.95 Aligned_cols=110 Identities=21% Similarity=0.157 Sum_probs=95.6
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHHHH
Q 006231 9 YAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETATEM 88 (655)
Q Consensus 9 ~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~Vkl 88 (655)
.|+||||+||..|+.++++.||+.+ +++|.+|. .|.||||+|+..|+.+++++
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g--------------------------~~~~~~~~-~g~t~L~~A~~~g~~~~v~~ 54 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQG--------------------------WAVNIITA-DHVSPLHEACLGGHLSCVKI 54 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT--------------------------CCSSCCCT-TCCCHHHHHHHHTCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCC--------------------------CCCCCcCC-CCCCHHHHHHHcCCHHHHHH
Confidence 4789999999999999999999873 45888887 89999999999999999999
Q ss_pred HHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHh
Q 006231 89 LMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMR 146 (655)
Q Consensus 89 LL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~ 146 (655)
|+++|++++.+|..|+||||+|+..|+.+++++|++++++.+. +..|.||+++|+..
T Consensus 55 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~ 111 (261)
T 2xai_A 55 LLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARR 111 (261)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHT
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHc
Confidence 9999999999999999999999999999999999999888764 44588999998844
No 67
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.68 E-value=1.9e-16 Score=155.12 Aligned_cols=119 Identities=21% Similarity=0.217 Sum_probs=100.0
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhH
Q 006231 6 VSKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETA 85 (655)
Q Consensus 6 ~nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~ 85 (655)
.|..|.||||+||..|+.++++.|++.. ...+++++.+|. .|.||||+|+..|+.++
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~----------------------~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~ 61 (241)
T 1k1a_A 5 ADEDGDTPLHIAVVQGNLPAVHRLVNLF----------------------QQGGRELDIYNN-LRQTPLHLAVITTLPSV 61 (241)
T ss_dssp --CTTCCHHHHHHHTTCHHHHHHHHHHH----------------------HHTTCCSCCCCT-TSCCHHHHHHHTTCHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHH----------------------HhcCCCCCcccc-cCCCHHHHHHHcCCHHH
Confidence 5788999999999999999999999731 001456888887 89999999999999999
Q ss_pred HHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcC----ChhHhhhcCCcchHHHHHhh
Q 006231 86 TEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQ----PLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 86 VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga----~~~~~d~~g~tPl~lAaL~~ 147 (655)
+++|+++|++++..|..|+||||+|+..|+.+++++|++++. ..+..+..|.||+++|+...
T Consensus 62 v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 127 (241)
T 1k1a_A 62 VRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE 127 (241)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHT
T ss_pred HHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcC
Confidence 999999999999999999999999999999999999998877 67777788889999888543
No 68
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.68 E-value=1.4e-16 Score=161.76 Aligned_cols=68 Identities=24% Similarity=0.229 Sum_probs=53.1
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETAT 86 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~V 86 (655)
+..|.||||+||..|+.++++.||+.+ ++++.+|. .|.||||+|+..|+.++|
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g--------------------------a~~~~~~~-~g~tpL~~A~~~g~~~~v 122 (299)
T 1s70_B 70 NVDGLTALHQACIDDNVDMVKFLVENG--------------------------ANINQPDN-EGWIPLHAAASCGYLDIA 122 (299)
T ss_dssp CTTCCBHHHHHHHTTCHHHHHHHHHTT--------------------------CCTTCCCT-TSCCHHHHHHHHTCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCC--------------------------CCCCCCCC-CCCcHHHHHHHcCCHHHH
Confidence 567899999999999999999999974 44666665 677777777777777777
Q ss_pred HHHHhcCCCCcccCC
Q 006231 87 EMLMVAGADWSLQNE 101 (655)
Q Consensus 87 klLL~~GADvn~~n~ 101 (655)
++|+++|++++..|.
T Consensus 123 ~~Ll~~g~~~~~~~~ 137 (299)
T 1s70_B 123 EYLISQGAHVGAVNS 137 (299)
T ss_dssp HHHHHTTCCTTCCCT
T ss_pred HHHHhCCCCCCCcCC
Confidence 777777777665554
No 69
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.68 E-value=8e-17 Score=148.43 Aligned_cols=111 Identities=21% Similarity=0.180 Sum_probs=102.8
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHHHHH
Q 006231 10 AHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETATEML 89 (655)
Q Consensus 10 G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~VklL 89 (655)
+.+|||+||..|+.+.++.||+.. +.+++..|. .|.||||+ +..|+.+++++|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~-------------------------~~~~~~~~~-~g~t~L~~-~~~~~~~~v~~L 54 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRE-------------------------LVHPDALNR-FGKTALQV-MMFGSTAIALEL 54 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTT-------------------------CCCTTCCCT-TSCCHHHH-SCTTCHHHHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhh-------------------------CcCccccCC-CCCcHHHH-HHcCCHHHHHHH
Confidence 468999999999999999999862 234788887 99999999 999999999999
Q ss_pred HhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 90 MVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 90 L~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.||+|+|+...
T Consensus 55 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 112 (156)
T 1bd8_A 55 LKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEG 112 (156)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHT
T ss_pred HHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999654
No 70
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.68 E-value=1.4e-16 Score=147.07 Aligned_cols=109 Identities=20% Similarity=0.217 Sum_probs=100.5
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHHHHHH
Q 006231 11 HSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETATEMLM 90 (655)
Q Consensus 11 ~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~VklLL 90 (655)
.+|||.|+..|+.++++.|++.+ ++++ .|. .|.||||+|+..|+.+++++|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g--------------------------~~~~-~~~-~g~t~L~~A~~~~~~~~v~~Ll 54 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANG--------------------------APFT-TDW-LGTSPLHLAAQYGHFSTTEVLL 54 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHT--------------------------CCCC-CCT-TCCCHHHHHHHHTCHHHHHHHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcC--------------------------CCCC-cCC-CCCCHHHHHHHcCCHHHHHHHH
Confidence 58999999999999999999974 2344 465 8999999999999999999999
Q ss_pred hcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 91 VAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 91 ~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.||+++|+...
T Consensus 55 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 111 (153)
T 1awc_B 55 RAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHN 111 (153)
T ss_dssp TTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999999999543
No 71
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.68 E-value=2.4e-16 Score=150.68 Aligned_cols=114 Identities=21% Similarity=0.212 Sum_probs=90.8
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETAT 86 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~V 86 (655)
+.++.||||+||..|+.+.++.||..++ .+++..|. .|.||||+|+..|+.+++
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~-------------------------~~~~~~~~-~g~t~L~~A~~~~~~~~v 55 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTT-------------------------YQVDEVDT-EGNTPLNIAVHNNDIEIA 55 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTT-------------------------CCTTCCCT-TSCCHHHHHHHHTCHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCC-------------------------CCCCCCCC-CCCCHHHHHHHcCCHHHH
Confidence 4678999999999999999999998742 24777776 788888888888888888
Q ss_pred HHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHH-HhcCChhHhhhcCCcchHHHHHh
Q 006231 87 EMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIV-RHYQPLAWAKWCRRLPRLVGTMR 146 (655)
Q Consensus 87 klLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL-~~ga~~~~~d~~g~tPl~lAaL~ 146 (655)
++|+++|++++.+|..|+||||+|+..|+.+++++|+ ..+..++..+..|.||+++|+..
T Consensus 56 ~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 116 (201)
T 3hra_A 56 KALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEK 116 (201)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHT
T ss_pred HHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHc
Confidence 8888888888888888888888888888888888888 44556677777788888887744
No 72
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.68 E-value=8.8e-17 Score=168.84 Aligned_cols=138 Identities=14% Similarity=0.094 Sum_probs=109.1
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhh----------ccccccc------------
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADA----------ISAAIDR------------ 64 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~----------igA~In~------------ 64 (655)
+.+|.||||+||..|+.++++.||+.+..... ....|.++.++...+.+. .+++++.
T Consensus 50 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~ 128 (364)
T 3ljn_A 50 NRFGCTALHLACKFGCVDTAKYLASVGEVHSL-WHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNE 128 (364)
T ss_dssp CTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC-BTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEE
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc-cCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhh
Confidence 45788999999999999999999887653222 234455555444333222 1444444
Q ss_pred -----cCCCCCCcHHHHHHHcC--ChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCC-----hhHh
Q 006231 65 -----RDVPNRDTPLHLAVKLG--DETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQP-----LAWA 132 (655)
Q Consensus 65 -----kD~p~G~TPLHlAv~~G--~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~-----~~~~ 132 (655)
+|. .|.||||+|+..| +.++|++||++|++++.+|..|+||||+|+..|+.+++++|++++++ ++..
T Consensus 129 ~~~~~~~~-~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 207 (364)
T 3ljn_A 129 IGSHVKHC-KGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYA 207 (364)
T ss_dssp ETTEEEEE-SCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCC
T ss_pred hccccCCC-CCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccc
Confidence 786 8999999999999 99999999999999999999999999999999999999999999888 8888
Q ss_pred hhcCCcchHHHHHh
Q 006231 133 KWCRRLPRLVGTMR 146 (655)
Q Consensus 133 d~~g~tPl~lAaL~ 146 (655)
+..|.||||+|+..
T Consensus 208 ~~~g~t~L~~A~~~ 221 (364)
T 3ljn_A 208 NKQGNSHLHWAILI 221 (364)
T ss_dssp CTTCCCTTHHHHTT
T ss_pred CCCCCcHHHHHHHc
Confidence 88999999999844
No 73
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.67 E-value=6.6e-17 Score=168.45 Aligned_cols=106 Identities=17% Similarity=0.180 Sum_probs=95.4
Q ss_pred CCCCChHHHHHHHc---CCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCCh
Q 006231 7 SKYAHSPVHKAIAM---RDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDE 83 (655)
Q Consensus 7 nk~G~TPLH~Aa~~---Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~l 83 (655)
+..|.||||+||.. |+.++++.||+. |+++|.+|. .|+||||+|+..|+.
T Consensus 187 ~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~--------------------------gadvn~~d~-~G~TpLh~A~~~g~~ 239 (301)
T 2b0o_E 187 QAPEELVLHLAVKVANQASLPLVDFIIQN--------------------------GGHLDAKAA-DGNTALHYAALYNQP 239 (301)
T ss_dssp CSCEECHHHHHHHTCCTTTHHHHHHHHHH--------------------------SSCTTCCCT-TCCCHHHHHHHTTCH
T ss_pred CCCCccHHHHHHHhcccCcHHHHHHHHhc--------------------------CCCCCCCCC-CCCCHHHHHHHcCCH
Confidence 56789999999997 899999999997 466999997 999999999999999
Q ss_pred hHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHH
Q 006231 84 TATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTM 145 (655)
Q Consensus 84 e~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL 145 (655)
++|++||++||+++.+|..|+||||+|+..|+.+++++|++++++ .|.||+++|+.
T Consensus 240 ~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~ 295 (301)
T 2b0o_E 240 DCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYS 295 (301)
T ss_dssp HHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC----
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHh
Confidence 999999999999999999999999999999999999999998765 68899999983
No 74
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.67 E-value=1.9e-16 Score=162.07 Aligned_cols=114 Identities=20% Similarity=0.135 Sum_probs=89.4
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhH
Q 006231 6 VSKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETA 85 (655)
Q Consensus 6 ~nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~ 85 (655)
.+..|+||||+||..|+.++++.||+.+ ++++.+|. .|+||||+|+..|+.++
T Consensus 55 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g--------------------------~~~~~~~~-~g~t~L~~A~~~g~~~~ 107 (285)
T 3d9h_A 55 DAVSDWSPMHEAAIHGHQLSLRNLISQG--------------------------WAVNIITA-DHVSPLHEACLGGHLSC 107 (285)
T ss_dssp SSCCSCCHHHHHHHTTCHHHHHHHHHTT--------------------------CCSCEECT-TCCCHHHHHHHTTCHHH
T ss_pred CCccCCCHHHHHHHcCCHHHHHHHHHCC--------------------------CCCCCcCC-CCCCHHHHHHHCCcHHH
Confidence 3567899999999999999999999974 44777776 78888888888888888
Q ss_pred HHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 86 TEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 86 VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
|++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++.. ..|.||+++|+...
T Consensus 108 v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g 168 (285)
T 3d9h_A 108 VKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPE-SDLASPIHEAARRG 168 (285)
T ss_dssp HHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCS-CTTSCHHHHHHHHT
T ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCC-CCCCCHHHHHHHcC
Confidence 88888888888877778888888888888888888888777766543 34777887777543
No 75
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.67 E-value=5.9e-17 Score=147.22 Aligned_cols=94 Identities=18% Similarity=0.149 Sum_probs=88.4
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCC-CCcHHHHHHHcCChhH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPN-RDTPLHLAVKLGDETA 85 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~-G~TPLHlAv~~G~le~ 85 (655)
+..|.||||+|+. |+.++++.||+. |++++.+|. . |+||||+|+..|+.++
T Consensus 42 ~~~g~t~L~~A~~-~~~~~v~~Ll~~--------------------------g~~~~~~~~-~~g~t~L~~A~~~~~~~~ 93 (136)
T 1d9s_A 42 NRFGRRPIQVMMM-GSAQVAELLLLH--------------------------GAEPNCADP-ATLTRPVHDAAREGFLDT 93 (136)
T ss_dssp CTTCCTTTTTSTT-SCHHHHHHHHHH--------------------------TCCSSCCBT-TTTBCHHHHHHHHTCHHH
T ss_pred CCCCCCHHHHHHc-CCHHHHHHHHHC--------------------------CCCCCCcCC-CCCCCHHHHHHHcCCHHH
Confidence 5679999999999 999999999987 356899997 8 9999999999999999
Q ss_pred HHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCC
Q 006231 86 TEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQP 128 (655)
Q Consensus 86 VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~ 128 (655)
+++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 94 v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 94 LVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999998864
No 76
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.67 E-value=1.5e-16 Score=171.05 Aligned_cols=139 Identities=18% Similarity=0.157 Sum_probs=117.2
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCC-CchhhhhhhhHhHHHHhh------hhccccccccCCCCCCcHHHHHHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLS-NPAEIRTEMASLAEEEKA------DAISAAIDRRDVPNRDTPLHLAVK 79 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~-dp~~i~te~~saa~e~~~------~~igA~In~kD~p~G~TPLHlAv~ 79 (655)
+..|.||||+|+..|+.++++.|++.+.... ......|.++.++...+. ...|+++|.+|. .|+||||+|+.
T Consensus 242 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~ 320 (437)
T 1n11_A 242 SVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTR-MGYTPLHVASH 320 (437)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCS-SCCCHHHHHHH
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCC-CCCCHHHHHHH
Confidence 4578999999999999999999998764421 122334555555443322 235788999997 99999999999
Q ss_pred cCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHh
Q 006231 80 LGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMR 146 (655)
Q Consensus 80 ~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~ 146 (655)
.|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+-.
T Consensus 321 ~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 387 (437)
T 1n11_A 321 YGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRL 387 (437)
T ss_dssp SSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHT
T ss_pred cCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHc
Confidence 9999999999999999999999999999999999999999999999999999999999999999843
No 77
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.67 E-value=1.6e-16 Score=139.98 Aligned_cols=91 Identities=29% Similarity=0.373 Sum_probs=83.4
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChh
Q 006231 5 DVSKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDET 84 (655)
Q Consensus 5 d~nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le 84 (655)
+.+..|.||||+||..|+.++++.||+. |++++.+|. .|+||||+||..|+.+
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--------------------------g~~i~~~d~-~g~tpLh~A~~~~~~~ 71 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMAN--------------------------GADVAAKDK-NGSTPLHLAARNGHLE 71 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHT--------------------------TCCTTCCCT-TCCCHHHHHHHTTCHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHc--------------------------CCCCCccCC-CCCCHHHHHHHcCCHH
Confidence 3567889999999999999999999987 356888997 9999999999999999
Q ss_pred HHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHH
Q 006231 85 ATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMII 122 (655)
Q Consensus 85 ~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lL 122 (655)
++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 72 ~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 72 VVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHcCCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 99999999999999999999999999999999999886
No 78
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.67 E-value=2.1e-16 Score=169.87 Aligned_cols=113 Identities=19% Similarity=0.257 Sum_probs=70.4
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETAT 86 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~V 86 (655)
+..|.||||+||..|+.++++.||+.+ ++++..|. .|.||||+|+..|+.++|
T Consensus 11 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g--------------------------~~~~~~~~-~~~t~L~~A~~~g~~~~v 63 (437)
T 1n11_A 11 GESGLTPLHVASFMGHLPIVKNLLQRG--------------------------ASPNVSNV-KVETPLHMAARAGHTEVA 63 (437)
T ss_dssp ----CCHHHHHHHHTCHHHHHHHHHTT--------------------------CCSCCSSS-CCCCHHHHHHHHTCHHHH
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHcC--------------------------CCCCCCCC-CCCCHHHHHHHcCCHHHH
Confidence 467899999999999999999999974 33455554 555555555555555555
Q ss_pred HHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHh
Q 006231 87 EMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMR 146 (655)
Q Consensus 87 klLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~ 146 (655)
++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.||+++|+..
T Consensus 64 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~ 123 (437)
T 1n11_A 64 KYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAARE 123 (437)
T ss_dssp HHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHH
T ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Confidence 555555555555555555555555555555555555555555555555555555555543
No 79
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.66 E-value=3.5e-16 Score=153.41 Aligned_cols=139 Identities=19% Similarity=0.237 Sum_probs=79.7
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCC-chhhhhhhhHhHHHHh------hhhccccccccCCCCCCcHHHHHH
Q 006231 6 VSKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSN-PAEIRTEMASLAEEEK------ADAISAAIDRRDVPNRDTPLHLAV 78 (655)
Q Consensus 6 ~nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~d-p~~i~te~~saa~e~~------~~~igA~In~kD~p~G~TPLHlAv 78 (655)
.+..|.||||+||..|+.++++.|++.+..... .....|.++.+..... ....|++++.+|. .|.||||+|+
T Consensus 7 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~ 85 (237)
T 3b7b_A 7 EHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDA-EGSTCLHLAA 85 (237)
T ss_dssp SSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCT-TSCCHHHHHH
T ss_pred ccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCC-CCCcHHHHHH
Confidence 356899999999999999999999998533211 1112233333322111 1123445555554 5555555555
Q ss_pred HcCChhHHHHHHhcC-CCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHH
Q 006231 79 KLGDETATEMLMVAG-ADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTM 145 (655)
Q Consensus 79 ~~G~le~VklLL~~G-ADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL 145 (655)
..|+.+++++|+++| ++++..+..|+||||+|+..|+.+++++|++++++++..+..|.||+++|+.
T Consensus 86 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 153 (237)
T 3b7b_A 86 KKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAF 153 (237)
T ss_dssp HTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHH
Confidence 555555555555555 5555555555555555555555555555555555555555555555555553
No 80
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.66 E-value=2.6e-16 Score=161.84 Aligned_cols=110 Identities=19% Similarity=0.221 Sum_probs=68.9
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHHH
Q 006231 8 KYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETATE 87 (655)
Q Consensus 8 k~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~Vk 87 (655)
..|.||||+||..|+.++++.||+. |++++.+|. .|.||||+|+..|+.++++
T Consensus 56 ~~g~t~L~~A~~~g~~~~v~~Ll~~--------------------------g~~~~~~~~-~g~t~L~~A~~~g~~~iv~ 108 (351)
T 3utm_A 56 GRKSTPLHLAAGYNRVRIVQLLLQH--------------------------GADVHAKDK-GGLVPLHNACSYGHYEVTE 108 (351)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHT--------------------------TCCTTCCCT-TCCCHHHHHHHTTCHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHc--------------------------CCCCCccCC-CCCcHHHHHHHCCCHHHHH
Confidence 4455566666666666666555554 234566665 6666666666666666666
Q ss_pred HHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHH
Q 006231 88 MLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGT 144 (655)
Q Consensus 88 lLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAa 144 (655)
+|+++|++++..|..|+||||+|+..|+.+++++|++++++.+..+..|.+|++++.
T Consensus 109 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~ 165 (351)
T 3utm_A 109 LLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAP 165 (351)
T ss_dssp HHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCS
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHh
Confidence 666666666666666666666666666666666666666666666666666666554
No 81
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.66 E-value=5.4e-16 Score=136.40 Aligned_cols=96 Identities=25% Similarity=0.347 Sum_probs=89.5
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhH
Q 006231 6 VSKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETA 85 (655)
Q Consensus 6 ~nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~ 85 (655)
.+..|.||||+|+..|+.++++.|++.+ ++++.+|. .|.||||+|+..|+.++
T Consensus 31 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g--------------------------~~~~~~~~-~g~t~l~~A~~~~~~~~ 83 (126)
T 1n0r_A 31 KDKNGRTPLHLAARNGHLEVVKLLLEAG--------------------------ADVNAKDK-NGRTPLHLAARNGHLEV 83 (126)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTT--------------------------CCTTCCCT-TSCCHHHHHHHTTCHHH
T ss_pred cCCCCCcHHHHHHHcCcHHHHHHHHHcC--------------------------CCCcccCC-CCCcHHHHHHHcChHHH
Confidence 3567899999999999999999999873 45888887 99999999999999999
Q ss_pred HHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCC
Q 006231 86 TEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQP 128 (655)
Q Consensus 86 VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~ 128 (655)
+++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 84 ~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 84 VKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999874
No 82
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.65 E-value=3.6e-16 Score=160.78 Aligned_cols=112 Identities=18% Similarity=0.187 Sum_probs=104.2
Q ss_pred CCCCCChHHHHHHHc---CCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCC
Q 006231 6 VSKYAHSPVHKAIAM---RDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGD 82 (655)
Q Consensus 6 ~nk~G~TPLH~Aa~~---Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~ 82 (655)
.+..|.||||+|+.. ++.++++.|++. |++++.+|. .|+||||+|+..|+
T Consensus 207 ~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~--------------------------g~~~~~~~~-~g~t~L~~A~~~g~ 259 (351)
T 3utm_A 207 QPQSHETALHCAVASLHPKRKQVAELLLRK--------------------------GANVNEKNK-DFMTPLHVAAERAH 259 (351)
T ss_dssp CTTTCCCHHHHHHHCCSTTHHHHHHHHHHT--------------------------TCCTTCCCT-TCCCHHHHHHHTTC
T ss_pred CCCCCCCHHHHHHHHhCccHHHHHHHHHHc--------------------------CCCcCCcCC-CCCCHHHHHHHcCC
Confidence 456789999999999 558899999987 456889997 99999999999999
Q ss_pred hhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHH
Q 006231 83 ETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGT 144 (655)
Q Consensus 83 le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAa 144 (655)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||++++.
T Consensus 260 ~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a~ 321 (351)
T 3utm_A 260 NDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGN 321 (351)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHSC
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999985
No 83
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.65 E-value=6.9e-16 Score=153.70 Aligned_cols=136 Identities=16% Similarity=0.117 Sum_probs=73.4
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCCC--chhhhhhhhHhHHHHh------hhhccccccccCCCCCCcHHHHHHHcC
Q 006231 10 AHSPVHKAIAMRDYPSLRRLLAGLPRLSN--PAEIRTEMASLAEEEK------ADAISAAIDRRDVPNRDTPLHLAVKLG 81 (655)
Q Consensus 10 G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~d--p~~i~te~~saa~e~~------~~~igA~In~kD~p~G~TPLHlAv~~G 81 (655)
|.+|||+|+..|+.++++.||+.++.+.. .....|.++.++.... ....|++++.+|. .|.||||+|+..|
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 83 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKK-NGATPFLLAAIAG 83 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHHT
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHcC
Confidence 45667777777777777777665432110 0111122222111110 1112344555554 6666666666666
Q ss_pred ChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHh----------hhcCCcchHHHHHh
Q 006231 82 DETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWA----------KWCRRLPRLVGTMR 146 (655)
Q Consensus 82 ~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~----------d~~g~tPl~lAaL~ 146 (655)
+.+++++|+++|++++..|..|+||||+|+..|+.+++++|++++.+.+.. +..|.+|+++|+..
T Consensus 84 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 158 (285)
T 1wdy_A 84 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK 158 (285)
T ss_dssp CHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHc
Confidence 666666666666666666666666666666666666666666666555443 44455666666543
No 84
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.65 E-value=9.4e-16 Score=152.72 Aligned_cols=137 Identities=18% Similarity=0.172 Sum_probs=80.7
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCC-----------chhhhhhhhHhHHHHhhhh-------ccccccccCCCC
Q 006231 8 KYAHSPVHKAIAMRDYPSLRRLLAGLPRLSN-----------PAEIRTEMASLAEEEKADA-------ISAAIDRRDVPN 69 (655)
Q Consensus 8 k~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~d-----------p~~i~te~~saa~e~~~~~-------igA~In~kD~p~ 69 (655)
.+|.||||+|+..|+.++++.|++.+..... .....+.++.+......+. .|++++.+|. .
T Consensus 103 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-~ 181 (285)
T 1wdy_A 103 FYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDN-M 181 (285)
T ss_dssp TTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCT-T
T ss_pred cccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCC-C
Confidence 4456666666666666666666655432211 0111233333332221111 2566666665 6
Q ss_pred CCcHHHHHHHcCC----hhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHH-hcCChhHhhhcCCcchHHHH
Q 006231 70 RDTPLHLAVKLGD----ETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVR-HYQPLAWAKWCRRLPRLVGT 144 (655)
Q Consensus 70 G~TPLHlAv~~G~----le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~-~ga~~~~~d~~g~tPl~lAa 144 (655)
|+||||+|+..++ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|++ ++++++..+..|.||+++|+
T Consensus 182 g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~ 261 (285)
T 1wdy_A 182 GRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAV 261 (285)
T ss_dssp SCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHH
T ss_pred CCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHH
Confidence 7777777777666 666677777777777777677777777777777777777776 56666666666777777666
Q ss_pred H
Q 006231 145 M 145 (655)
Q Consensus 145 L 145 (655)
.
T Consensus 262 ~ 262 (285)
T 1wdy_A 262 E 262 (285)
T ss_dssp H
T ss_pred H
Confidence 3
No 85
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.65 E-value=3.9e-16 Score=160.69 Aligned_cols=95 Identities=17% Similarity=0.220 Sum_probs=89.8
Q ss_pred CCCCChHHHHHHHc---CCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCCh
Q 006231 7 SKYAHSPVHKAIAM---RDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDE 83 (655)
Q Consensus 7 nk~G~TPLH~Aa~~---Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~l 83 (655)
+..|.||||+||.. |+.++++.||+. |+++|.+|. .|+||||+|+..|+.
T Consensus 166 ~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~--------------------------ga~in~~d~-~g~TpLh~A~~~g~~ 218 (278)
T 1dcq_A 166 HEPDETALHLAVRSVDRTSLHIVDFLVQN--------------------------SGNLDKQTG-KGSTALHYCCLTDNA 218 (278)
T ss_dssp SSTTCBHHHHHHHHCCTTTHHHHHHHHHH--------------------------CSCTTCCCT-TCCCHHHHHHHTTCH
T ss_pred ccCCCCcchHHHHhcccchHHHHHHHHHC--------------------------CCCccccCC-CCCCHHHHHHHcCCH
Confidence 46799999999999 899999999997 467999997 999999999999999
Q ss_pred hHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCC
Q 006231 84 TATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQP 128 (655)
Q Consensus 84 e~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~ 128 (655)
++|++||++|||++.+|..|+||||+|+..|+.+++++|+++++.
T Consensus 219 ~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 219 ECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999998875
No 86
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.64 E-value=4.5e-16 Score=159.13 Aligned_cols=140 Identities=15% Similarity=0.111 Sum_probs=108.4
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCC---------chhhhhhhhHhHHH-------HhhhhccccccccCCCCC
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSN---------PAEIRTEMASLAEE-------EKADAISAAIDRRDVPNR 70 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~d---------p~~i~te~~saa~e-------~~~~~igA~In~kD~p~G 70 (655)
|..+.+|||.||..|+.++++.||+.+..... .....+.++.++.. ......|+++|.+|. .|
T Consensus 8 d~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~-~G 86 (269)
T 4b93_B 8 DYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQ-DG 86 (269)
T ss_dssp CCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCT-TS
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCC-CC
Confidence 33457999999999999999999987542100 01122333332211 122335789999998 99
Q ss_pred CcHHHHHHHcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 71 DTPLHLAVKLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 71 ~TPLHlAv~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
+||||+||..|+.++|++||.+|++++.++..|+||||.|+..++.+++++|++++++++..+..|.||||+|+...
T Consensus 87 ~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g 163 (269)
T 4b93_B 87 SSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGG 163 (269)
T ss_dssp CCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTT
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999553
No 87
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.64 E-value=4.8e-16 Score=172.34 Aligned_cols=105 Identities=17% Similarity=0.169 Sum_probs=89.8
Q ss_pred CCCCChHHHHHHH---cCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCCh
Q 006231 7 SKYAHSPVHKAIA---MRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDE 83 (655)
Q Consensus 7 nk~G~TPLH~Aa~---~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~l 83 (655)
+..|.||||+||. .|+.++++.||+. |+++|.+|. .|+||||+||..|+.
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~--------------------------ga~vn~~d~-~g~TpLh~A~~~g~~ 220 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQN--------------------------GGHLDAKAA-DGNTALHYAALYNQP 220 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHH--------------------------SCCTTCCCS-SSCCHHHHHTTTTCH
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHc--------------------------CCCCCccCC-CCCcHHHHHHHcCCH
Confidence 5679999999976 9999999999997 467999998 999999999999999
Q ss_pred hHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHH
Q 006231 84 TATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGT 144 (655)
Q Consensus 84 e~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAa 144 (655)
++|++||++|||++.+|..|+||||+|+..|+.+++++|+++|++.+. +|+|++.
T Consensus 221 ~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~ 275 (497)
T 3lvq_E 221 DCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA------FPLHVDY 275 (497)
T ss_dssp HHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------------
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC------Ccceeec
Confidence 999999999999999999999999999999999999999999998754 5777654
No 88
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.63 E-value=1.6e-16 Score=158.56 Aligned_cols=109 Identities=18% Similarity=0.173 Sum_probs=100.2
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETAT 86 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~V 86 (655)
+..|.||||+||..|+.++++.||+. |+++|.+|. .|+||||+|+..|+.+++
T Consensus 51 d~~g~tpLh~A~~~g~~~~v~~Ll~~--------------------------ga~~n~~d~-~g~tpLh~A~~~g~~~~v 103 (229)
T 2vge_A 51 NEEGITALHNAICGANYSIVDFLITA--------------------------GANVNSPDS-HGWTPLHCAASCNDTVIC 103 (229)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHT--------------------------TCCTTCCCT-TCCCHHHHHHHTTCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHC--------------------------CCCCCCCCC-CCCCHHHHHHHcCCHHHH
Confidence 56799999999999999999999987 456999997 999999999999999999
Q ss_pred HHHHhcCCCCcccC-CCCCChHHHH--HHcCCHHHHHHHHHhcCChhHhhhcCCcchHH
Q 006231 87 EMLMVAGADWSLQN-EQGWSALQEA--ICSREEGIAMIIVRHYQPLAWAKWCRRLPRLV 142 (655)
Q Consensus 87 klLL~~GADvn~~n-~~G~TpLh~A--~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~l 142 (655)
++||++|++++.++ ..|+||||+| +..|+.+++++|+++|++++..+..+.+|++.
T Consensus 104 ~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~ 162 (229)
T 2vge_A 104 MALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWD 162 (229)
T ss_dssp HHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSC
T ss_pred HHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHH
Confidence 99999999999986 6999999999 99999999999999999988887777777664
No 89
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.62 E-value=2.8e-16 Score=156.61 Aligned_cols=113 Identities=15% Similarity=0.063 Sum_probs=75.4
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETAT 86 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~V 86 (655)
+..|.||||.|+..|+.+.++.||+++ ++++.. +.|.||||+|+..|+.++|
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g--------------------------~~~~~~--~~~~t~L~~A~~~g~~~~v 53 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHG--------------------------MRVKFN--PLPLALLLDSSLEGEFDLV 53 (239)
T ss_dssp ---------------------------------------------------------------CHHHHHHHHHHTCHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccC--------------------------CCcccC--chhhHHHHHHHHcCCHHHH
Confidence 456899999999999999999999874 345533 3799999999999999999
Q ss_pred HHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 87 EMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 87 klLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
++||++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.||+|+|+...
T Consensus 54 ~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~ 114 (239)
T 1ycs_B 54 QRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCN 114 (239)
T ss_dssp HHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999543
No 90
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.62 E-value=9.3e-16 Score=164.99 Aligned_cols=112 Identities=20% Similarity=0.207 Sum_probs=103.9
Q ss_pred CChHHHHHHHc-CCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccC--CCCCCcHHHHHHHcCChhHH
Q 006231 10 AHSPVHKAIAM-RDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRD--VPNRDTPLHLAVKLGDETAT 86 (655)
Q Consensus 10 G~TPLH~Aa~~-Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD--~p~G~TPLHlAv~~G~le~V 86 (655)
+.++||+|+.. |+.++++.||+.+ +++|..| . .|.||||+||..|+.++|
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~G--------------------------advn~~~~~~-~g~TpLh~Aa~~g~~~iv 251 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHG--------------------------ADVNWVNGGQ-DNATPLIQATAANSLLAC 251 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTT--------------------------CCTTCCCTTT-TCCCHHHHHHHTTCHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcC--------------------------CCCCcccccc-CCCCHHHHHHHCCCHHHH
Confidence 35799999999 9999999999873 5677777 6 899999999999999999
Q ss_pred HHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhhc
Q 006231 87 EMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRRM 148 (655)
Q Consensus 87 klLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~~ 148 (655)
++||++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.||+++|+....
T Consensus 252 ~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~ 313 (368)
T 3jue_A 252 EFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETAN 313 (368)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCC
Confidence 99999999999999999999999999999999999999999999999999999999985543
No 91
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.62 E-value=1.4e-15 Score=156.49 Aligned_cols=116 Identities=17% Similarity=0.184 Sum_probs=102.4
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHc---CChhHHH
Q 006231 11 HSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKL---GDETATE 87 (655)
Q Consensus 11 ~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~---G~le~Vk 87 (655)
.++||.|+..|+...+..++..+..... ...++..|. .|+||||+|+.. |+.++++
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~--------------------~~~l~~~~~-~g~t~Lh~A~~~~~~~~~~~v~ 189 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTE--------------------KIPLANGHE-PDETALHLAVRSVDRTSLHIVD 189 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTS--------------------BCCCSSCSS-TTCBHHHHHHHHCCTTTHHHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhh--------------------hcccccccc-CCCCcchHHHHhcccchHHHHH
Confidence 3689999999999999999987533110 001566676 899999999999 8999999
Q ss_pred HHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 88 MLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 88 lLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
+||++||++|.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+...
T Consensus 190 ~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~ 249 (278)
T 1dcq_A 190 FLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLK 249 (278)
T ss_dssp HHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999554
No 92
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.62 E-value=3.5e-16 Score=160.37 Aligned_cols=116 Identities=14% Similarity=0.065 Sum_probs=88.7
Q ss_pred CCCCC-CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcC
Q 006231 3 GIDVS-KYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLG 81 (655)
Q Consensus 3 Gad~n-k~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G 81 (655)
|++++ ..|.||||+||..|+.++++.||+.+ ++++.+|. .|+||||+|+..|
T Consensus 54 g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--------------------------a~~~~~d~-~g~t~L~~A~~~g 106 (285)
T 3kea_A 54 GALKNLLENEFPLHQAATLEDTKIVKILLFSG--------------------------LDDSQFDD-KGNTALYYAVDSG 106 (285)
T ss_dssp TGGGSCCTTCCHHHHHTTSSSCHHHHHHHHTT--------------------------CCTTCCCT-TSCCHHHHHHHTT
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC--------------------------CCCCCcCC-CCCcHHHHHHHcC
Confidence 45544 35899999999999999999999974 45777776 7888888888888
Q ss_pred ChhHHHHHHhcCCCCcccCCCC-CChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHh
Q 006231 82 DETATEMLMVAGADWSLQNEQG-WSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMR 146 (655)
Q Consensus 82 ~le~VklLL~~GADvn~~n~~G-~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~ 146 (655)
+.+++++|+++|++++.+|..| .||||+|+..|+.+++++|+++++..... ..|.||+|+|+..
T Consensus 107 ~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~ 171 (285)
T 3kea_A 107 NMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKN 171 (285)
T ss_dssp CHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHT
T ss_pred CHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHc
Confidence 8888888888888888777777 58888888888888888888777655211 1566788877744
No 93
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.61 E-value=3.2e-15 Score=145.41 Aligned_cols=141 Identities=22% Similarity=0.187 Sum_probs=94.8
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCC-chhhhhhhhHhHHHHhh------hhccccccccCCCCCCcHHHHHH
Q 006231 6 VSKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSN-PAEIRTEMASLAEEEKA------DAISAAIDRRDVPNRDTPLHLAV 78 (655)
Q Consensus 6 ~nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~d-p~~i~te~~saa~e~~~------~~igA~In~kD~p~G~TPLHlAv 78 (655)
.+.+|.+|||+|+..|+.++++.|++.+..... .....+.++.++..... ...+++++..+...|.||||+|+
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~ 84 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWAT 84 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHH
T ss_pred cccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHH
Confidence 456777888888888888888888876533211 11222333333322211 11334455433324788888888
Q ss_pred HcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHh
Q 006231 79 KLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMR 146 (655)
Q Consensus 79 ~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~ 146 (655)
..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++++.++..+..|.||+++|+..
T Consensus 85 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~ 152 (240)
T 3eu9_A 85 RQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYR 152 (240)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHh
Confidence 88888888888888888888888888888888888888888888888877777777788888887744
No 94
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.61 E-value=1.1e-15 Score=169.40 Aligned_cols=111 Identities=15% Similarity=0.153 Sum_probs=101.7
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhcccccccc------CCCCCCcHHHHHHH---cC
Q 006231 11 HSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRR------DVPNRDTPLHLAVK---LG 81 (655)
Q Consensus 11 ~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~k------D~p~G~TPLHlAv~---~G 81 (655)
.+.||.||..|+.+.++.||+.+ +++|.. |. .|+||||+||. .|
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g--------------------------~~~n~~~~~~~~~~-~g~t~Lh~A~~~a~~g 185 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANG--------------------------QDFGQPLPGPDAQA-PEELVLHLAVKVANQA 185 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTT--------------------------CCSSSCBCCSSSCC-SCBCHHHHHHHTCCTT
T ss_pred HHHHHHHHhccCHHHHHHHHhhc--------------------------ccccCCCCCccccc-ccchHHHHHHHhcccc
Confidence 46799999999999999999984 345555 76 89999999977 89
Q ss_pred ChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhhc
Q 006231 82 DETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRRM 148 (655)
Q Consensus 82 ~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~~ 148 (655)
+.++|++||++|||+|.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+....
T Consensus 186 ~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 252 (497)
T 3lvq_E 186 SLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHH 252 (497)
T ss_dssp THHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTC
T ss_pred cHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999996544
No 95
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.61 E-value=5.8e-15 Score=153.33 Aligned_cols=144 Identities=18% Similarity=0.110 Sum_probs=112.0
Q ss_pred CCCCC----CCCChHHHHHHHcCCHHHHHHHHhcCCCCCC-chhhhhhhhHhH------HHHhhhhccccccccCCCCCC
Q 006231 3 GIDVS----KYAHSPVHKAIAMRDYPSLRRLLAGLPRLSN-PAEIRTEMASLA------EEEKADAISAAIDRRDVPNRD 71 (655)
Q Consensus 3 Gad~n----k~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~d-p~~i~te~~saa------~e~~~~~igA~In~kD~p~G~ 71 (655)
|+|++ ..|+||||+||..|+.++++.||+++..... .....+..+.+. ........+++++.+|. .|.
T Consensus 48 Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~g~ 126 (337)
T 4g8k_A 48 GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDF-YGF 126 (337)
T ss_dssp TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCT-TCC
T ss_pred CCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhcc-CCC
Confidence 66664 3589999999999999999999998744211 111111111111 12222335678999997 999
Q ss_pred cHHHHHHHcCChhHHHHHHhcCCCCccc----------CCCCCChHHHHHHcCCHHHHHHHHH-hcCChhHhhhcCCcch
Q 006231 72 TPLHLAVKLGDETATEMLMVAGADWSLQ----------NEQGWSALQEAICSREEGIAMIIVR-HYQPLAWAKWCRRLPR 140 (655)
Q Consensus 72 TPLHlAv~~G~le~VklLL~~GADvn~~----------n~~G~TpLh~A~~~G~~eIV~lLL~-~ga~~~~~d~~g~tPl 140 (655)
||||+|+..|+.+++++|+++|++++.. +..|+||||+|+..|+.+++++|+. .+++++..+..|.+++
T Consensus 127 t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l 206 (337)
T 4g8k_A 127 TAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNAL 206 (337)
T ss_dssp BHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHH
T ss_pred CHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHH
Confidence 9999999999999999999999998764 3468999999999999999999996 5899999999999999
Q ss_pred HHHHHhh
Q 006231 141 LVGTMRR 147 (655)
Q Consensus 141 ~lAaL~~ 147 (655)
+.+++..
T Consensus 207 ~~~~~~~ 213 (337)
T 4g8k_A 207 IHALLSS 213 (337)
T ss_dssp HHHHHHS
T ss_pred HHHHHHc
Confidence 9887553
No 96
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.61 E-value=2.4e-15 Score=159.94 Aligned_cols=144 Identities=17% Similarity=0.145 Sum_probs=111.4
Q ss_pred CCCC---CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCC-chhhhhhhhHhHHHHhhhh------cc---ccccccCCCC
Q 006231 3 GIDV---SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSN-PAEIRTEMASLAEEEKADA------IS---AAIDRRDVPN 69 (655)
Q Consensus 3 Gad~---nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~d-p~~i~te~~saa~e~~~~~------ig---A~In~kD~p~ 69 (655)
|+++ +..|.||||+||..|+.++++.||+.+..... .....|.++.++.....+. .+ ++++..|. .
T Consensus 156 ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~-~ 234 (373)
T 2fo1_E 156 GADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDR-N 234 (373)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCT-T
T ss_pred CCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCC-C
Confidence 5554 46789999999999999999999998654221 2233455555544332222 22 67888887 8
Q ss_pred CCcHHHHHHHcC---ChhHHHHHHhcCCCCcc--------cCCCCCChHHHHHHcCCHHHHHHHHHhc-CChhHhhhcCC
Q 006231 70 RDTPLHLAVKLG---DETATEMLMVAGADWSL--------QNEQGWSALQEAICSREEGIAMIIVRHY-QPLAWAKWCRR 137 (655)
Q Consensus 70 G~TPLHlAv~~G---~le~VklLL~~GADvn~--------~n~~G~TpLh~A~~~G~~eIV~lLL~~g-a~~~~~d~~g~ 137 (655)
|.||||+|+..+ +.+++++|+++|++++. .|..|+||||+|+..|+.+++++|++++ ++++..+..|.
T Consensus 235 g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~ 314 (373)
T 2fo1_E 235 GMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGK 314 (373)
T ss_dssp SCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCC
T ss_pred CCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCC
Confidence 999999999888 78899999999999886 5668999999999999999999999875 88888888999
Q ss_pred cchHHHHHhh
Q 006231 138 LPRLVGTMRR 147 (655)
Q Consensus 138 tPl~lAaL~~ 147 (655)
||+|+|+...
T Consensus 315 TpL~~A~~~g 324 (373)
T 2fo1_E 315 TPIMLAAQEG 324 (373)
T ss_dssp CHHHHHHHHT
T ss_pred CHHHHHHHcC
Confidence 9999998554
No 97
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.61 E-value=1.3e-15 Score=161.93 Aligned_cols=145 Identities=17% Similarity=0.183 Sum_probs=116.2
Q ss_pred CCCC---CCCCChHHHHHHHcCCHHHHHHHHhcC---CCC-CCchhhhhhhhHhHHH---------Hhhhhccccccc--
Q 006231 3 GIDV---SKYAHSPVHKAIAMRDYPSLRRLLAGL---PRL-SNPAEIRTEMASLAEE---------EKADAISAAIDR-- 64 (655)
Q Consensus 3 Gad~---nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~---p~l-~dp~~i~te~~saa~e---------~~~~~igA~In~-- 64 (655)
|+++ +..|.||||+|+..|+.++++.||+.+ ... .......|.++.++.. +.....|++++.
T Consensus 189 ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~ 268 (373)
T 2fo1_E 189 GADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDG 268 (373)
T ss_dssp TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCS
T ss_pred CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCccccc
Confidence 4554 467899999999999999999999864 111 1122334444444322 222335666664
Q ss_pred ------cCCCCCCcHHHHHHHcCChhHHHHHHhcC-CCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCC
Q 006231 65 ------RDVPNRDTPLHLAVKLGDETATEMLMVAG-ADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRR 137 (655)
Q Consensus 65 ------kD~p~G~TPLHlAv~~G~le~VklLL~~G-ADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~ 137 (655)
.|. .|.||||+|+..|+.++|++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.
T Consensus 269 ~~~~~~~d~-~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~ 347 (373)
T 2fo1_E 269 AARKDSEKY-KGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDH 347 (373)
T ss_dssp GGGTSSSSC-CCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSC
T ss_pred ccccCcccc-cCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCC
Confidence 676 8999999999999999999999886 99999999999999999999999999999999999999999999
Q ss_pred cchHHHHHhhc
Q 006231 138 LPRLVGTMRRM 148 (655)
Q Consensus 138 tPl~lAaL~~~ 148 (655)
||+++|+....
T Consensus 348 t~l~~A~~~g~ 358 (373)
T 2fo1_E 348 TARQLAQANNH 358 (373)
T ss_dssp CHHHHHHHTTC
T ss_pred CHHHHHHHcCC
Confidence 99999995543
No 98
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.61 E-value=1.8e-15 Score=157.55 Aligned_cols=112 Identities=15% Similarity=0.163 Sum_probs=101.7
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccc------cCCCCCCcHHHHHHHc---
Q 006231 10 AHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDR------RDVPNRDTPLHLAVKL--- 80 (655)
Q Consensus 10 G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~------kD~p~G~TPLHlAv~~--- 80 (655)
+.++||.|+..|+.+.++.||..+ ++++. .|. .|+||||+||..
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g--------------------------~d~~~~~~~~~~~~-~g~t~Lh~A~~~~~~ 203 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANG--------------------------QDFGQPLPGPDAQA-PEELVLHLAVKVANQ 203 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTT--------------------------CCTTSCEECSSSCS-CEECHHHHHHHTCCT
T ss_pred hHHHHhhhhhccCHHHHHHHHhcC--------------------------CcccccCCCcccCC-CCccHHHHHHHhccc
Confidence 347899999999999999999874 33554 576 899999999997
Q ss_pred CChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhhc
Q 006231 81 GDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRRM 148 (655)
Q Consensus 81 G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~~ 148 (655)
|+.+++++||++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+....
T Consensus 204 ~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~ 271 (301)
T 2b0o_E 204 ASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHH 271 (301)
T ss_dssp TTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTC
T ss_pred CcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 89999999999999999999999999999999999999999999999999999999999999996543
No 99
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.59 E-value=3.5e-15 Score=145.14 Aligned_cols=91 Identities=10% Similarity=-0.070 Sum_probs=82.1
Q ss_pred hhccccccccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCcccC-CCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhh
Q 006231 56 DAISAAIDRRDVPNRDTPLHLAVKLGDETATEMLMVAGADWSLQN-EQGWSALQEAICSREEGIAMIIVRHYQPLAWAKW 134 (655)
Q Consensus 56 ~~igA~In~kD~p~G~TPLHlAv~~G~le~VklLL~~GADvn~~n-~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~ 134 (655)
...|++++..|. .|.||||+|+..|+.+++++|+++|++++..+ ..|+||||+|+..|+.+++++|++++++.+..+.
T Consensus 29 l~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 107 (240)
T 3eu9_A 29 VEAGYDVRQPDK-ENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDG 107 (240)
T ss_dssp HHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHcCCCcCCCCC-CCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 335788999997 99999999999999999999999999988655 4599999999999999999999999999988889
Q ss_pred cCCcchHHHHHhh
Q 006231 135 CRRLPRLVGTMRR 147 (655)
Q Consensus 135 ~g~tPl~lAaL~~ 147 (655)
.|.+|+++|+...
T Consensus 108 ~g~t~l~~A~~~~ 120 (240)
T 3eu9_A 108 EGCSCIHLAAQFG 120 (240)
T ss_dssp TSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcC
Confidence 9999999998553
No 100
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.59 E-value=3.4e-15 Score=152.45 Aligned_cols=93 Identities=23% Similarity=0.305 Sum_probs=83.4
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETAT 86 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~V 86 (655)
+..|.||||+||..|+.++++.||+. |+++|.+|. .|+||||+|+..|+.++|
T Consensus 180 ~~~g~tpLh~A~~~g~~~~v~~Ll~~--------------------------gad~n~~d~-~G~TpLh~A~~~g~~~iv 232 (276)
T 4hbd_A 180 SQAGQTALMLAVSHGRVDVVKALLAC--------------------------EADVNVQDD-DGSTALMCACEHGHKEIA 232 (276)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHT--------------------------TCCTTCCCT-TSCCHHHHHHHHTCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhC--------------------------CCCCCCCCC-CCCCHHHHHHHCCCHHHH
Confidence 34577778887777777777777776 567999997 999999999999999999
Q ss_pred HHHHh-cCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhc
Q 006231 87 EMLMV-AGADWSLQNEQGWSALQEAICSREEGIAMIIVRHY 126 (655)
Q Consensus 87 klLL~-~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~g 126 (655)
++||+ +|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 233 ~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 233 GLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 99999 89999999999999999999999999999999875
No 101
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.59 E-value=5.7e-16 Score=150.40 Aligned_cols=106 Identities=11% Similarity=0.067 Sum_probs=95.3
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccC-CCCCCcHHHHHHHcCCh----hH
Q 006231 11 HSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRD-VPNRDTPLHLAVKLGDE----TA 85 (655)
Q Consensus 11 ~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD-~p~G~TPLHlAv~~G~l----e~ 85 (655)
.++||.||..|+.+.++.++..+ ++.++ . .|+||||+|+..|+. ++
T Consensus 7 ~~~l~~Aa~~g~~~~~~~l~~~~----------------------------~~~~~~~-~g~T~Lh~A~~~~~~~~~~~i 57 (186)
T 3t8k_A 7 YRTVSAAAMLGTYEDFLELFEKG----------------------------YEDKESV-LKSNILYDVLRNNNDEARYKI 57 (186)
T ss_dssp CSSHHHHHHHSCHHHHHHHHHHS----------------------------SSCHHHH-HTTTHHHHHTTCSCHHHHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHhcC----------------------------ccccccc-CCCCHHHHHHHcCCcchHHHH
Confidence 57899999999999999998763 44444 4 799999999999975 58
Q ss_pred HHHHHhcCCCCcccCCCCCChHHHHHHcCC------HHHHHHHHHhcCChhHhhhcCC-cchHHHHH
Q 006231 86 TEMLMVAGADWSLQNEQGWSALQEAICSRE------EGIAMIIVRHYQPLAWAKWCRR-LPRLVGTM 145 (655)
Q Consensus 86 VklLL~~GADvn~~n~~G~TpLh~A~~~G~------~eIV~lLL~~ga~~~~~d~~g~-tPl~lAaL 145 (655)
+++||++|||+|.+|..|+||||+|+..|+ .+++++|+++|++++..+..|+ ||+|+|+.
T Consensus 58 v~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~ 124 (186)
T 3t8k_A 58 SMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFN 124 (186)
T ss_dssp HHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGG
T ss_pred HHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHH
Confidence 999999999999999999999999999987 5789999999999999999999 99999884
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.59 E-value=9.3e-16 Score=150.20 Aligned_cols=104 Identities=15% Similarity=0.056 Sum_probs=82.9
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETAT 86 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~V 86 (655)
+..|.||||+||..|+.++++.||+.. |++++.+|. .|+||||+|+..|+.++|
T Consensus 103 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~-------------------------g~~~~~~d~-~g~tpL~~A~~~~~~~~v 156 (222)
T 3ehr_A 103 DKAGSTALYWACHGGHKDIVEMLFTQP-------------------------NIELNQQNK-LGDTALHAAAWKGYADIV 156 (222)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHTTST-------------------------TCCCCCCCT-TSCCHHHHHHHHTCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHcCC-------------------------CCCccccCC-CCCCHHHHHHHcCCHHHH
Confidence 467999999999999999999999862 356899997 999999999999999999
Q ss_pred HHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcC
Q 006231 87 EMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCR 136 (655)
Q Consensus 87 klLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g 136 (655)
++||++|++++.+|..|+||||+|+..|+.++++.|+..++.....+..+
T Consensus 157 ~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~ 206 (222)
T 3ehr_A 157 QLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAED 206 (222)
T ss_dssp HHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------------
T ss_pred HHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhh
Confidence 99999999999999999999999999999999999999888776554433
No 103
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.58 E-value=4.7e-15 Score=159.52 Aligned_cols=94 Identities=21% Similarity=0.288 Sum_probs=88.2
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHHH
Q 006231 8 KYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETATE 87 (655)
Q Consensus 8 k~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~Vk 87 (655)
..|.||||+||..|+.++++.||+. |+++|.+|. .|+||||+|+..|+.++|+
T Consensus 233 ~~g~TpLh~Aa~~g~~~iv~~LL~~--------------------------Gadvn~~d~-~G~TpLh~A~~~g~~~~v~ 285 (368)
T 3jue_A 233 QDNATPLIQATAANSLLACEFLLQN--------------------------GANVNQADS-AGRGPLHHATILGHTGLAC 285 (368)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHT--------------------------TCCTTCCCT-TSCCHHHHHHHHTCHHHHH
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHc--------------------------CCCCCCCCC-CCCCHHHHHHHcCcHHHHH
Confidence 6789999999999999999999997 467999997 9999999999999999999
Q ss_pred HHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCC
Q 006231 88 MLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQP 128 (655)
Q Consensus 88 lLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~ 128 (655)
+||++||+++.+|..|+||||+|+..|+.+++++|+..+..
T Consensus 286 ~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 286 LFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred HHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999987643
No 104
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.56 E-value=2.7e-15 Score=133.66 Aligned_cols=80 Identities=26% Similarity=0.313 Sum_probs=74.0
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETAT 86 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~V 86 (655)
+..|.||||+||..|+.++++.||+. |++++.+|. .|+||||+|+..|+.+++
T Consensus 37 ~~~g~t~L~~A~~~~~~~~v~~Ll~~--------------------------g~~~~~~d~-~g~tpL~~A~~~~~~~~v 89 (123)
T 3aaa_C 37 LEGGRKPLHYAADCGQLEILEFLLLK--------------------------GADINAPDK-HHITPLLSAVYEGHVSCV 89 (123)
T ss_dssp CTTSSCHHHHHHHTTCHHHHHHHHTT--------------------------TCCTTCCCT-TSCCHHHHHHHHTCHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHc--------------------------CCCCCcCCC-CCCCHHHHHHHcCCHHHH
Confidence 46789999999999999999999987 456899997 999999999999999999
Q ss_pred HHHHhcCCCCcccCCCCCChHHHHHHc
Q 006231 87 EMLMVAGADWSLQNEQGWSALQEAICS 113 (655)
Q Consensus 87 klLL~~GADvn~~n~~G~TpLh~A~~~ 113 (655)
++|+++|++++.+|..|+||||+|...
T Consensus 90 ~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 90 KLLLSKGADKTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHCCCH
T ss_pred HHHHHcCCCCCCcCCCCCCHHHHhCCH
Confidence 999999999999999999999999443
No 105
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.55 E-value=9.6e-15 Score=151.68 Aligned_cols=113 Identities=19% Similarity=0.220 Sum_probs=104.6
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHHHH
Q 006231 9 YAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETATEM 88 (655)
Q Consensus 9 ~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~Vkl 88 (655)
.|.|+||.||.+|++++|+.||+. |+++|.+|...|+||||+||..|+.++|++
T Consensus 24 ~~~t~L~~Av~~g~~~~V~~LL~~--------------------------Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~ 77 (337)
T 4g8k_A 24 EDNHLLIKAVQNEDVDLVQQLLEG--------------------------GANVNFQEEEGGWTPLHNAVQMSREDIVEL 77 (337)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHH--------------------------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHHC--------------------------CCCCCccCCCCCcCHHHHHHHcCCHHHHHH
Confidence 367999999999999999999997 467888875259999999999999999999
Q ss_pred HHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 89 LMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 89 LL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
||++||+++.++..+.++++.++..+...++..++..+.+++..+..|.||+++|+...
T Consensus 78 Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~ 136 (337)
T 4g8k_A 78 LLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYG 136 (337)
T ss_dssp HHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTT
T ss_pred HHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999998553
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.55 E-value=1e-14 Score=124.04 Aligned_cols=79 Identities=23% Similarity=0.293 Sum_probs=74.5
Q ss_pred CCCcHHHHHHHcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhh
Q 006231 69 NRDTPLHLAVKLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRR 147 (655)
Q Consensus 69 ~G~TPLHlAv~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~ 147 (655)
.|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.||+++|+...
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 4899999999999999999999999999999999999999999999999999999999999999999999999998553
No 107
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.54 E-value=2.1e-15 Score=136.69 Aligned_cols=93 Identities=19% Similarity=0.249 Sum_probs=82.8
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETAT 86 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~V 86 (655)
+..|.||||+|+..|+.++++.||+. |++++.+|. .|.||||+|+..|+.+++
T Consensus 40 ~~~g~t~L~~A~~~~~~~~~~~Ll~~--------------------------g~~~~~~~~-~g~t~L~~A~~~~~~~~v 92 (137)
T 3c5r_A 40 DHAGWTPLHEACNHGHLKVVELLLQH--------------------------KALVNTTGY-QNDSPLHDAAKNGHVDIV 92 (137)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHT--------------------------TCCTTCCCG-GGCCHHHHHHHTTCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHc--------------------------CCcccCcCC-CCCCHHHHHHHcCCHHHH
Confidence 46789999999999999999999987 356888897 999999999999999999
Q ss_pred HHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhc
Q 006231 87 EMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHY 126 (655)
Q Consensus 87 klLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~g 126 (655)
++|+++|++++.+|..|+||||+|+..+..+++.+|.+..
T Consensus 93 ~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 93 KLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp HHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred HHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 9999999999999999999999999988888887776543
No 108
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.53 E-value=1.7e-14 Score=137.60 Aligned_cols=83 Identities=24% Similarity=0.273 Sum_probs=75.8
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccC-CCCCCcHHHHHHHcCChhH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRD-VPNRDTPLHLAVKLGDETA 85 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD-~p~G~TPLHlAv~~G~le~ 85 (655)
+..|.||||+|+..|+.++++.||+. |+++|.+| . .|+||||+|+..|+.++
T Consensus 73 d~~g~t~L~~A~~~~~~~~v~~Ll~~--------------------------ga~~~~~~~~-~g~tpL~~A~~~~~~~~ 125 (183)
T 3deo_A 73 DENGRTALLFVAGLGSDKCVRLLAEA--------------------------GADLDHRDMR-GGLTALHMAAGYVRPEV 125 (183)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHT--------------------------TCCTTCCCSS-SSCCHHHHHHHTTCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHc--------------------------CCCCCcCCCC-CCCCHHHHHHhcCcHHH
Confidence 56799999999999999999999997 35688888 6 89999999999999999
Q ss_pred HHHHHhcCCCCcccCCCCCChHHHHHHcCCH
Q 006231 86 TEMLMVAGADWSLQNEQGWSALQEAICSREE 116 (655)
Q Consensus 86 VklLL~~GADvn~~n~~G~TpLh~A~~~G~~ 116 (655)
+++|+++|++++.+|..|+||||+|+..++.
T Consensus 126 v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~ 156 (183)
T 3deo_A 126 VEALVELGADIEVEDERGLTALELAREILKT 156 (183)
T ss_dssp HHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT
T ss_pred HHHHHHcCCCCcCCCCCCCCHHHHHHHhccC
Confidence 9999999999999999999999999875443
No 109
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.52 E-value=2e-14 Score=144.16 Aligned_cols=100 Identities=22% Similarity=0.233 Sum_probs=86.1
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccC-CCCCCcHHHHHHHcCChhH
Q 006231 7 SKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRD-VPNRDTPLHLAVKLGDETA 85 (655)
Q Consensus 7 nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD-~p~G~TPLHlAv~~G~le~ 85 (655)
+..|+||||+||..|+.++++.||+. |+++|.+| . .|+||||+|+..|+.++
T Consensus 74 d~~g~t~L~~A~~~g~~~~v~~Ll~~--------------------------ga~~~~~~~~-~g~t~L~~A~~~g~~~~ 126 (244)
T 3ui2_A 74 DENGRTALLFVAGLGSDKCVRLLAEA--------------------------GADLDHRDMR-GGLTALHMAAGYVRPEV 126 (244)
T ss_dssp CTTSCBHHHHHHHHTCHHHHHHHHHT--------------------------TCCTTCCCSS-SCCCHHHHHHHTTCHHH
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHc--------------------------CCCCCcCCCC-CCCCHHHHHHHcCCHHH
Confidence 56799999999999999999999997 45688888 5 89999999999999999
Q ss_pred HHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHhhcch
Q 006231 86 TEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMRRMRD 150 (655)
Q Consensus 86 VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~~~~D 150 (655)
|++||++|++++.+|..|+||||+|+..++ ...+.+|+++++.....+
T Consensus 127 v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~~~ 174 (244)
T 3ui2_A 127 VEALVELGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGLEK 174 (244)
T ss_dssp HHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcChHH
Confidence 999999999999999999999999986322 135678888887664433
No 110
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.44 E-value=4e-14 Score=148.01 Aligned_cols=86 Identities=17% Similarity=0.150 Sum_probs=79.5
Q ss_pred cccccc-cCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCC---HHHHHHHHHhc-CChhHhh
Q 006231 59 SAAIDR-RDVPNRDTPLHLAVKLGDETATEMLMVAGADWSLQNEQGWSALQEAICSRE---EGIAMIIVRHY-QPLAWAK 133 (655)
Q Consensus 59 gA~In~-kD~p~G~TPLHlAv~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~---~eIV~lLL~~g-a~~~~~d 133 (655)
|+++|. +|. .|+||||+||..|+.++|++||++||+++.+|..|+||||+|+..|+ .+++..|++++ ++++..+
T Consensus 120 g~dvn~~~d~-~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d 198 (327)
T 1sw6_A 120 QLNLNIPVDE-HGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILED 198 (327)
T ss_dssp CCCSCSCCST-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEEC
T ss_pred CCCcccccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCC
Confidence 567999 897 99999999999999999999999999999999999999999999998 67888888876 6788889
Q ss_pred hcCCcchHHHHH
Q 006231 134 WCRRLPRLVGTM 145 (655)
Q Consensus 134 ~~g~tPl~lAaL 145 (655)
..|.||||+|+.
T Consensus 199 ~~g~tpLh~A~~ 210 (327)
T 1sw6_A 199 SMNRTILHHIII 210 (327)
T ss_dssp TTCCCHHHHHHH
T ss_pred CCCCCHHHHHHH
Confidence 999999999985
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.44 E-value=1.5e-13 Score=120.87 Aligned_cols=86 Identities=13% Similarity=0.104 Sum_probs=77.4
Q ss_pred ccccCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchH
Q 006231 62 IDRRDVPNRDTPLHLAVKLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRL 141 (655)
Q Consensus 62 In~kD~p~G~TPLHlAv~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~ 141 (655)
....|. .|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.||++
T Consensus 17 ~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 95 (110)
T 2zgd_A 17 GSHMGS-DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFD 95 (110)
T ss_dssp -----C-CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ccccCC-ccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHH
Confidence 444565 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhc
Q 006231 142 VGTMRRM 148 (655)
Q Consensus 142 lAaL~~~ 148 (655)
+|+....
T Consensus 96 ~A~~~~~ 102 (110)
T 2zgd_A 96 ISIDNGN 102 (110)
T ss_dssp HHHHHTC
T ss_pred HHHHcCC
Confidence 9996543
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.41 E-value=4.4e-14 Score=152.28 Aligned_cols=115 Identities=12% Similarity=-0.051 Sum_probs=92.8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChhHHHH
Q 006231 9 YAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDETATEM 88 (655)
Q Consensus 9 ~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le~Vkl 88 (655)
.+.||||+||..|+.++++.||+.+... ...+..+. .|.||||+||..|+.++|++
T Consensus 91 ~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~-----------------------~~~~~~~~-~~~tpL~~Aa~~G~~eiv~~ 146 (376)
T 2aja_A 91 KSEVICFVAAITGCSSALDTLCLLLTSD-----------------------EIVKVIQA-ENYQAFRLAAENGHLHVLNR 146 (376)
T ss_dssp CHHHHHHHHHHHCCHHHHHHHTTC--CC-----------------------SSCC--CH-HHHHHHHHHHHTTCHHHHHH
T ss_pred CcCCHHHHHHHcCCHHHHHHHHHcCCcH-----------------------HHHHHhcc-CCCCHHHHHHHcCCHHHHHH
Confidence 3569999999999999999999875210 01222333 68899999999999999999
Q ss_pred HHhcCCC---CcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhH--hhhcCCcchHHHH-Hhhc
Q 006231 89 LMVAGAD---WSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAW--AKWCRRLPRLVGT-MRRM 148 (655)
Q Consensus 89 LL~~GAD---vn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~--~d~~g~tPl~lAa-L~~~ 148 (655)
|+++|++ ++..+.+ +||||+|+..|+.+++++|++++++++. .+..|.||+++|+ ....
T Consensus 147 Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~ 211 (376)
T 2aja_A 147 LCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGH 211 (376)
T ss_dssp HHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCC
T ss_pred HHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCC
Confidence 9999987 3333334 9999999999999999999999999877 8888999999999 6543
No 113
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.40 E-value=2.7e-13 Score=118.99 Aligned_cols=81 Identities=20% Similarity=0.229 Sum_probs=77.2
Q ss_pred cCCCCCCcHHHHHHHcCChhHHHHHHhcCCCCcccCCCCCChHHHHHHcCCHHHHHHHHHhcCChhHhhhcCCcchHHHH
Q 006231 65 RDVPNRDTPLHLAVKLGDETATEMLMVAGADWSLQNEQGWSALQEAICSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGT 144 (655)
Q Consensus 65 kD~p~G~TPLHlAv~~G~le~VklLL~~GADvn~~n~~G~TpLh~A~~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAa 144 (655)
+|. .|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++++++..+..|.||+++|+
T Consensus 5 ~d~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSK-DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSC-SSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred cCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 465 8999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred Hh
Q 006231 145 MR 146 (655)
Q Consensus 145 L~ 146 (655)
..
T Consensus 84 ~~ 85 (115)
T 2l6b_A 84 KN 85 (115)
T ss_dssp TT
T ss_pred HC
Confidence 44
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.30 E-value=5.6e-14 Score=151.50 Aligned_cols=110 Identities=12% Similarity=0.004 Sum_probs=89.4
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCchhhhhhhhHhHHHHhhhhccccccccCCCCCCcHHHHHHHcCChh
Q 006231 5 DVSKYAHSPVHKAIAMRDYPSLRRLLAGLPRLSNPAEIRTEMASLAEEEKADAISAAIDRRDVPNRDTPLHLAVKLGDET 84 (655)
Q Consensus 5 d~nk~G~TPLH~Aa~~Gd~~~Lk~LL~~~p~l~dp~~i~te~~saa~e~~~~~igA~In~kD~p~G~TPLHlAv~~G~le 84 (655)
+++..|.||||+||..|+.++++.||+.++.. .. ++++ +. +.||||+||..|+.+
T Consensus 123 ~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~---~~------------------~~i~--~~--~~TpLh~Aa~~G~~e 177 (376)
T 2aja_A 123 VIQAENYQAFRLAAENGHLHVLNRLCELAPTE---IM------------------AMIQ--AE--NYHAFRLAAENGHLH 177 (376)
T ss_dssp --CHHHHHHHHHHHHTTCHHHHHHHHHSCTTT---HH------------------HHHS--HH--HHHHHHHHHHTTCHH
T ss_pred HhccCCCCHHHHHHHcCCHHHHHHHHhCCCCc---cc------------------cccC--CC--CCCHHHHHHHCCCHH
Confidence 45567789999999999999999999985210 00 1122 22 389999999999999
Q ss_pred HHHHHHhcCCCCcc--cCCCCCChHHHHH-HcCCHHHHHHHHHhcCChhHhhhcCCcchHHHHHh
Q 006231 85 ATEMLMVAGADWSL--QNEQGWSALQEAI-CSREEGIAMIIVRHYQPLAWAKWCRRLPRLVGTMR 146 (655)
Q Consensus 85 ~VklLL~~GADvn~--~n~~G~TpLh~A~-~~G~~eIV~lLL~~ga~~~~~d~~g~tPl~lAaL~ 146 (655)
+|++|+++|++++. .|..|+||||+|+ ..|+.+++++|+++++ .+.||+++|+..
T Consensus 178 iv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~ 235 (376)
T 2aja_A 178 VLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEY 235 (376)
T ss_dssp HHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTT
T ss_pred HHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHC
Confidence 99999999999988 8999999999999 9999999999998653 367888887733
Done!