Your job contains 1 sequence.
>006232
MPRYLPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELH
PVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVT
DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM
LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY
NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENAD
DLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPV
GEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTW
DSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMST
ISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRN
KGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAKDFAGSTQNNS
LGSCAVNIAAEATLTSMNGGSSSSALSPNGGLGELEVLSANLITSIGAFKVSTFL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006232
(655 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2030943 - symbol:PAPS1 "poly(A) polymerase 1" ... 1846 1.8e-190 1
TAIR|locus:2134113 - symbol:nPAP "nuclear poly(a) polymer... 1511 5.6e-155 1
TAIR|locus:2043560 - symbol:PAPS2 "poly(A) polymerase 2" ... 1479 1.4e-151 1
DICTYBASE|DDB_G0288259 - symbol:papA "poly(A) polymerase"... 1007 1.4e-101 1
ZFIN|ZDB-GENE-040426-1256 - symbol:papolg "poly(A) polyme... 958 2.2e-96 1
UNIPROTKB|Q9BWT3 - symbol:PAPOLG "Poly(A) polymerase gamm... 912 8.8e-96 2
ZFIN|ZDB-GENE-030131-3507 - symbol:papola "poly(A) polyme... 919 9.9e-95 2
RGD|1310337 - symbol:Papolg "poly(A) polymerase gamma" sp... 911 1.8e-93 2
UNIPROTKB|A5D7N5 - symbol:PAPOLG "Uncharacterized protein... 917 5.0e-92 1
UNIPROTKB|F1SQL7 - symbol:PAPOLG "Uncharacterized protein... 913 1.3e-91 1
MGI|MGI:2442119 - symbol:Papolg "poly(A) polymerase gamma... 912 1.7e-91 1
MGI|MGI:1932115 - symbol:Papolb "poly (A) polymerase beta... 887 2.4e-91 2
UNIPROTKB|J9NS30 - symbol:PAPOLG "Uncharacterized protein... 906 7.3e-91 1
UNIPROTKB|F1NKG9 - symbol:PAPOLA "Uncharacterized protein... 904 1.2e-90 1
MGI|MGI:109301 - symbol:Papola "poly (A) polymerase alpha... 901 2.5e-90 1
UNIPROTKB|I3LRR6 - symbol:PAPOLB "Uncharacterized protein... 900 3.1e-90 1
UNIPROTKB|G3MYA2 - symbol:PAPOLA "Poly(A) polymerase alph... 898 5.1e-90 1
UNIPROTKB|P25500 - symbol:PAPOLA "Poly(A) polymerase alph... 898 5.1e-90 1
UNIPROTKB|Q3T0A2 - symbol:PAPOLA "Poly(A) polymerase alph... 898 5.1e-90 1
UNIPROTKB|F1PDS0 - symbol:PAPOLA "Uncharacterized protein... 898 5.1e-90 1
UNIPROTKB|G3XAH6 - symbol:PAPOLA "Poly(A) polymerase alph... 898 5.1e-90 1
UNIPROTKB|P51003 - symbol:PAPOLA "Poly(A) polymerase alph... 898 5.1e-90 1
UNIPROTKB|F1SAQ7 - symbol:PAPOLA "Uncharacterized protein... 898 5.1e-90 1
UNIPROTKB|I3L6F0 - symbol:PAPOLA "Uncharacterized protein... 898 5.1e-90 1
FB|FBgn0015949 - symbol:hrg "hiiragi" species:7227 "Droso... 854 7.1e-90 2
UNIPROTKB|Q9NRJ5 - symbol:PAPOLB "Poly(A) polymerase beta... 891 2.8e-89 1
RGD|1310946 - symbol:Papolb "poly (A) polymerase beta (te... 883 2.0e-88 1
UNIPROTKB|F1NL95 - symbol:F1NL95 "Uncharacterized protein... 872 2.9e-87 1
UNIPROTKB|F1P3A1 - symbol:F1P3A1 "Uncharacterized protein... 872 2.9e-87 1
WB|WBGene00009658 - symbol:F43G6.5 species:6239 "Caenorha... 855 1.8e-85 1
UNIPROTKB|F1NDP1 - symbol:PAPOLA "Uncharacterized protein... 850 6.2e-85 1
WB|WBGene00011791 - symbol:T15H9.6 species:6239 "Caenorha... 847 1.3e-84 1
UNIPROTKB|Q09995 - symbol:T15H9.6 "Protein T15H9.6" speci... 847 1.3e-84 1
POMBASE|SPBC646.04 - symbol:pla1 "poly(A) polymerase Pla1... 824 3.6e-82 1
CGD|CAL0002451 - symbol:PAP1 species:5476 "Candida albica... 786 4.6e-80 2
UNIPROTKB|Q9UW26 - symbol:PAPA "Poly(A) polymerase PAPa" ... 786 4.6e-80 2
WB|WBGene00012528 - symbol:pap-1 species:6239 "Caenorhabd... 801 9.7e-80 1
UNIPROTKB|Q9U2P3 - symbol:pap-1 "Protein PAP-1" species:6... 801 9.7e-80 1
SGD|S000001710 - symbol:PAP1 "Poly(A) polymerase, one of ... 793 6.8e-79 1
GENEDB_PFALCIPARUM|PFF1240w - symbol:PFF1240w "poly(A) po... 619 5.2e-77 2
UNIPROTKB|C6KT92 - symbol:PFF1240w "Poly(A) polymerase PA... 619 5.2e-77 2
RGD|1308673 - symbol:Papola "poly (A) polymerase alpha" s... 633 4.7e-68 2
UNIPROTKB|D4A764 - symbol:Papola "Protein Papola" species... 549 4.2e-59 2
UNIPROTKB|H0YJ00 - symbol:PAPOLA "Poly(A) polymerase alph... 596 5.1e-58 1
TAIR|locus:2084274 - symbol:PAPS3 "poly(A) polymerase 3" ... 596 5.1e-58 1
UNIPROTKB|F8WAT4 - symbol:PAPOLG "Poly(A) polymerase gamm... 521 4.6e-50 1
UNIPROTKB|G3V2A0 - symbol:PAPOLA "Poly(A) polymerase alph... 453 7.3e-43 1
UNIPROTKB|G4N5I8 - symbol:MGG_06121 "Uncharacterized prot... 212 2.4e-13 1
UNIPROTKB|Q59G05 - symbol:PAPOLG "Poly(A) polymerase gamm... 177 3.2e-12 2
UNIPROTKB|F1PYB9 - symbol:PAPOLG "Uncharacterized protein... 176 2.7e-10 1
UNIPROTKB|H7C3W0 - symbol:PAPOLG "Poly(A) polymerase gamm... 149 1.5e-09 1
UNIPROTKB|G3V3I9 - symbol:PAPOLA "Poly(A) polymerase alph... 136 3.7e-08 1
>TAIR|locus:2030943 [details] [associations]
symbol:PAPS1 "poly(A) polymerase 1" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043631 "RNA
polyadenylation" evidence=IDA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006351 EMBL:AC034106
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
UniGene:At.26787 UniGene:At.73166 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 HSSP:P25500 BRENDA:2.7.7.19
EMBL:BT005990 EMBL:AY323906 EMBL:AK227446 IPI:IPI00540119
PIR:B86315 RefSeq:NP_173240.2 ProteinModelPortal:Q9LMT2 SMR:Q9LMT2
IntAct:Q9LMT2 STRING:Q9LMT2 PaxDb:Q9LMT2 PRIDE:Q9LMT2
EnsemblPlants:AT1G17980.1 GeneID:838378 KEGG:ath:AT1G17980
TAIR:At1g17980 InParanoid:Q9LMT2 OMA:WDTLFEP PhylomeDB:Q9LMT2
ProtClustDB:CLSN2680711 Genevestigator:Q9LMT2 Uniprot:Q9LMT2
Length = 713
Score = 1846 (654.9 bits), Expect = 1.8e-190, P = 1.8e-190
Identities = 343/427 (80%), Positives = 374/427 (87%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VHGPGADIDTLCVGPRHATRE DFFGEL +ML+EMPEVTELHPVPDAHVP+M F
Sbjct: 92 GSYRLGVHGPGADIDTLCVGPRHATREGDFFGELQRMLSEMPEVTELHPVPDAHVPLMGF 151
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
K +GVSIDLLYA+L LWVIPEDLD+SQDSILQNADEQTVRSLNGCRVTDQILRLVP IQN
Sbjct: 152 KLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQN 211
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVARICQLYPNA+P++LVSRFFRV+ QW
Sbjct: 212 FRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLYPNALPNILVSRFFRVFYQW 271
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPN + LC+ +EGSLGLQVWDPR NPKD+ H+MPIITPAYPCMNSSYNVS STLRIM
Sbjct: 272 NWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPIITPAYPCMNSSYNVSESTLRIMKG 331
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EFQRG+EICEAME N+AD WDTLFEPF FFEAYKNYL+IDISA N DDLR WKGWVESR
Sbjct: 332 EFQRGNEICEAMESNKAD--WDTLFEPFAFFEAYKNYLQIDISAANVDDLRKWKGWVESR 389
Query: 313 LRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTV 372
LRQLTLKIERH + ML CHPHP DF D S+PL+CSYFMGLQRKQGVP EGEQFDIR TV
Sbjct: 390 LRQLTLKIERH-FKMLHCHPHPHDFQDTSRPLHCSYFMGLQRKQGVPAAEGEQFDIRRTV 448
Query: 373 KEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDS-RRALERKVS 431
+EFK V+ YTL PGM+ISV H+ RR+LPNFVFPGGVRPS SKGTWDS RR+ R S
Sbjct: 449 EEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFPGGVRPSHTSKGTWDSNRRSEHRNSS 508
Query: 432 SHTKPGA 438
+ + P A
Sbjct: 509 TSSAPAA 515
>TAIR|locus:2134113 [details] [associations]
symbol:nPAP "nuclear poly(a) polymerase" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA;ISS] [GO:0031123
"RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006623 "protein targeting to vacuole"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 EMBL:CP002687
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 IPI:IPI00656923
RefSeq:NP_001031779.1 UniGene:At.25084 ProteinModelPortal:F4JV63
SMR:F4JV63 PRIDE:F4JV63 EnsemblPlants:AT4G32850.8 GeneID:829421
KEGG:ath:AT4G32850 OMA:EDQLEWC PhylomeDB:F4JV63 Uniprot:F4JV63
Length = 765
Score = 1511 (537.0 bits), Expect = 5.6e-155, P = 5.6e-155
Identities = 298/517 (57%), Positives = 360/517 (69%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGPGADIDTLCVGP + REEDFF LH +L EM EVTELHPVPDAHV
Sbjct: 97 VIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEVTELHPVPDAHV 156
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVRSLNGCRV DQIL+LV
Sbjct: 157 PVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNGCRVADQILKLV 216
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQLYPNA+PSMLVSRFFR
Sbjct: 217 PNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFR 276
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPAYPCMNSSYNVS STL
Sbjct: 277 VYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTL 336
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++DI A +A+DL WKG
Sbjct: 337 RVMTEQFQFGNNILQEIELNKQH--WSSLFEQYMFFEAYKNYLQVDIVAADAEDLLAWKG 394
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMGLQRKQGVPVGEGEQF 366
WVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMGLQR +GV E +QF
Sbjct: 395 WVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQF 454
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKG-TWDSRRA 425
DIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R R S+ ++
Sbjct: 455 DIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKS 514
Query: 426 LERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEF--REGXXXXXXXXX 483
E SH+ + KRK + +D + A++ S + E
Sbjct: 515 GEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSAITTGWTP 574
Query: 484 XXXNLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 520
NL+ + E N E E LTD R NS
Sbjct: 575 PVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>TAIR|locus:2043560 [details] [associations]
symbol:PAPS2 "poly(A) polymerase 2" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA;ISS]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=RCA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006351 GO:GO:0003723 EMBL:AC005395
GO:GO:0004652 GO:GO:0043631 KO:K14376 eggNOG:COG5186
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376 HSSP:P25500
EMBL:AF255297 EMBL:AY039974 EMBL:AY074533 IPI:IPI00518420
PIR:E84653 RefSeq:NP_565611.1 UniGene:At.14867 SMR:O82312
IntAct:O82312 STRING:O82312 EnsemblPlants:AT2G25850.2 GeneID:817127
KEGG:ath:AT2G25850 TAIR:At2g25850 InParanoid:O82312 OMA:MGSESIN
ProtClustDB:CLSN2688428 BRENDA:2.7.7.19 Genevestigator:O82312
Uniprot:O82312
Length = 800
Score = 1479 (525.7 bits), Expect = 1.4e-151, P = 1.4e-151
Identities = 286/473 (60%), Positives = 346/473 (73%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGP ADIDTLCVGP + REEDFF +L EM EVTEL PV DAHV
Sbjct: 99 VIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAEMEEVTELQPVTDAHV 158
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL VIP+DLDIS S+L + DEQTVRSLNGCRV DQIL+LV
Sbjct: 159 PVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVRSLNGCRVADQILKLV 218
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQ YPNA+PSMLVSRFFR
Sbjct: 219 PNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQFYPNAIPSMLVSRFFR 278
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LCAIEE L VWDPR+N +D+YHLMPIITPAYPCMNSSYNVS STL
Sbjct: 279 VYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTL 338
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M ++FQ G+ IC+ +E N+ W +LF+ + FFEAYKNYL++D+ A +A+DL WKG
Sbjct: 339 RVMTEQFQFGNTICQEIELNKQH--WSSLFQQYMFFEAYKNYLQVDVLAADAEDLLAWKG 396
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESR RQLTLKIER T ML CHP P ++ D SK +C++FMGLQR G E +QF
Sbjct: 397 WVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQRADGFGGQECQQF 456
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKG-TWDSRRA 425
DIR TV EF+Q V+MY +PGM + V+HV RR LP+FVFP G + SR S+ + R
Sbjct: 457 DIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQSRHQSQQCREP 516
Query: 426 LERKVSSHTKPGADDGRKRKQTDDNVDTHL----RNAKC--H---ATMPSSSG 469
+ V S + KRK D+ +++ + A C H A P SSG
Sbjct: 517 GDEGVGS-LSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAASPDSSG 568
>DICTYBASE|DDB_G0288259 [details] [associations]
symbol:papA "poly(A) polymerase" species:44689
"Dictyostelium discoideum" [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA;ISS;IBA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=ISS;IBA] [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
dictyBase:DDB_G0288259 GO:GO:0005524 GO:GO:0046872 GO:GO:0006378
GO:GO:0006351 GenomeReviews:CM000154_GR GO:GO:0003723
EMBL:AAFI02000109 GO:GO:0005847 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003 HSSP:P25500
RefSeq:XP_636814.1 ProteinModelPortal:Q54J73 STRING:Q54J73
EnsemblProtists:DDB0216279 GeneID:8626531 KEGG:ddi:DDB_G0288259
OMA:NINESST ProtClustDB:PTZ00418 Uniprot:Q54J73
Length = 809
Score = 1007 (359.5 bits), Expect = 1.4e-101, P = 1.4e-101
Identities = 216/462 (46%), Positives = 283/462 (61%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VHGPG+DIDTLCVGP+H R DFF +L +L PE+TE V DA VPV+
Sbjct: 134 GSYRLGVHGPGSDIDTLCVGPKHIMRS-DFFDDLSDILKVHPEITEFTTVKDAFVPVITM 192
Query: 73 KFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
FSG+ IDL+YA+L+L IPE+L D+ +S L+N DE+++ SLNGCRVTDQIL+LVP I
Sbjct: 193 VFSGIPIDLIYAKLALTAIPEELNDLIDESFLKNIDEKSILSLNGCRVTDQILKLVPNIP 252
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LRC++ WA RRG+YSN+ GFLGG++WALL ARICQLYPN+ PS ++ RFF+VY
Sbjct: 253 NFRMALRCIKLWAIRRGIYSNILGFLGGVSWALLTARICQLYPNSAPSTIIHRFFKVYEI 312
Query: 192 WRWPNPVLLCAIEEGS-LGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIM 250
W+WP P+LLC I+EG LG +VW+P+R DK HLMPIITPAYP MNS+YNVS STL++M
Sbjct: 313 WKWPAPILLCHIQEGGILGPKVWNPKR---DKAHLMPIITPAYPSMNSTYNVSKSTLQLM 369
Query: 251 MDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVE 310
EF RG EI +E E W L E FF Y Y+ ID + N +D R W+GW+E
Sbjct: 370 KSEFVRGAEITRKIETGECT--WKNLLEKCDFFTRYSFYIEIDCYSMNEEDSRKWEGWIE 427
Query: 311 SRLRQLTLKIERHTYNMLQCHPHPGDFSDK----SKP--LYCSYFMGLQRKQGVPVGEGE 364
S+LR L +E T M P+P F++ + P + S+FMGL G +
Sbjct: 428 SKLRFLISNLES-TPKMKFAVPYPKGFTNNLHKANNPDQICTSFFMGLSFNFSNTPGADK 486
Query: 365 QFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWD 421
D+ V EF + + +P M I V ++ ++ LP FV G P P K T
Sbjct: 487 SVDLTKAVTEFTGIIKDWLRTQPNPDTMDIKVQYIKKKQLPAFVKDEG--PEEPVKTT-- 542
Query: 422 SRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 463
+K SS +P A ++K +N D L + K T
Sbjct: 543 ------KKRSSTGEPSAT---RKKLKSENSDNKLNSPKSPIT 575
>ZFIN|ZDB-GENE-040426-1256 [details] [associations]
symbol:papolg "poly(A) polymerase gamma"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA;IBA]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IBA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
ZFIN:ZDB-GENE-040426-1256 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 KO:K14376 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOVERGEN:HBG053502 CTD:64895 EMBL:BC056818
IPI:IPI00492667 RefSeq:NP_956915.1 UniGene:Dr.79169
ProteinModelPortal:Q6PGV5 SMR:Q6PGV5 STRING:Q6PGV5 PRIDE:Q6PGV5
GeneID:393593 KEGG:dre:393593 InParanoid:Q6PGV5 NextBio:20814613
ArrayExpress:Q6PGV5 Bgee:Q6PGV5 Uniprot:Q6PGV5
Length = 744
Score = 958 (342.3 bits), Expect = 2.2e-96, P = 2.2e-96
Identities = 193/414 (46%), Positives = 268/414 (64%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L E+ +L V DA VPV+KF
Sbjct: 102 GSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFFEKLKRHDEIKDLRAVEDAFVPVIKF 160
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
KF G+ IDLL+ARL+L IP++LD+ DS+L+N D + +RSLNGCRVTD+IL LVP +N
Sbjct: 161 KFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLDIRCIRSLNGCRVTDEILYLVPNKEN 220
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNAV + LV +FF V+++W
Sbjct: 221 FRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKW 280
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL E+ +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST IM +
Sbjct: 281 EWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMNE 340
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF+ G + + + + +AD W LFEP FF+ Y++Y+ + SA ++ W G VES+
Sbjct: 341 EFKNGLTVTDEILQGKAD--WSKLFEPPNFFQQYRHYIVLTASASTEENHLEWIGLVESK 398
Query: 313 LRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDI 368
+R L +ER+ Y + +P PG ++++ + S +F+G+ K+ + + D+
Sbjct: 399 IRVLVGNLERNEYITLAHVNPQSFPGSKENRNENDFVSMWFIGISFKK-LDNSDCVNIDL 457
Query: 369 RLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKG 418
++ F V S + K GM I HV ++ L +++ P V+ + S G
Sbjct: 458 TYDIQSFTDTVYRQASNINMLKDGMTIEATHVKKKQLHHYLPPELVQRKKKSLG 511
>UNIPROTKB|Q9BWT3 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0006378 "mRNA polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005524 GO:GO:0005634 EMBL:CH471053
GO:GO:0046872 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 HOVERGEN:HBG053502
EMBL:AY029162 EMBL:AF312211 EMBL:AJ308101 EMBL:AK021867
EMBL:AK023544 EMBL:AK314663 EMBL:BC111701 EMBL:BC113747
IPI:IPI00304442 RefSeq:NP_075045.2 UniGene:Hs.387471
ProteinModelPortal:Q9BWT3 SMR:Q9BWT3 STRING:Q9BWT3
PhosphoSite:Q9BWT3 DMDM:116242699 PaxDb:Q9BWT3 PRIDE:Q9BWT3
Ensembl:ENST00000238714 GeneID:64895 KEGG:hsa:64895 UCSC:uc002sai.3
CTD:64895 GeneCards:GC02P060983 HGNC:HGNC:14982 HPA:CAB017795
neXtProt:NX_Q9BWT3 PharmGKB:PA32934 InParanoid:Q9BWT3 OMA:IDGSSKR
OrthoDB:EOG4R23T8 PhylomeDB:Q9BWT3 GenomeRNAi:64895 NextBio:67037
ArrayExpress:Q9BWT3 Bgee:Q9BWT3 CleanEx:HS_PAPOLG
Genevestigator:Q9BWT3 GermOnline:ENSG00000115421 Uniprot:Q9BWT3
Length = 736
Score = 912 (326.1 bits), Expect = 8.8e-96, Sum P(2) = 8.8e-96
Identities = 183/421 (43%), Positives = 262/421 (62%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L + L V DA VPV+KF
Sbjct: 100 GSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKF 158
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP +
Sbjct: 159 EFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKET 218
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V+++W
Sbjct: 219 FRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKW 278
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST +M++
Sbjct: 279 EWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVE 338
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF++G + + + + ++D W L EP FF+ Y++Y+ + SA ++ W G VES+
Sbjct: 339 EFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESK 396
Query: 313 LRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDI 368
+R L +ER+ + + +P PG+ Y S +F+G+ ++ V E D+
Sbjct: 397 IRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESVNIDL 455
Query: 369 RLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRR 424
++ F V + + K GM+I HV ++ L +++ P + + + D R
Sbjct: 456 TYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-PAEILQKKKKQSLSDVNR 514
Query: 425 A 425
+
Sbjct: 515 S 515
Score = 60 (26.2 bits), Expect = 8.8e-96, Sum P(2) = 8.8e-96
Identities = 21/83 (25%), Positives = 35/83 (42%)
Query: 494 DANELAG---SNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNS 550
D N +G S R ++++ DS R + N +S K D P +G+ NS
Sbjct: 511 DVNRSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETER--------NS 562
Query: 551 KDAEKLAIEKIMSGPYVADQAFP 573
+ + +EK +S P + P
Sbjct: 563 AEPAAVIVEKPLSVPPAQGLSIP 585
>ZFIN|ZDB-GENE-030131-3507 [details] [associations]
symbol:papola "poly(A) polymerase alpha"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA;IBA]
[GO:0005634 "nucleus" evidence=IEA;IBA] [GO:0031123 "RNA 3'-end
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0006378 "mRNA polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 ZFIN:ZDB-GENE-030131-3507 GO:GO:0005634
GO:GO:0005737 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 EMBL:AL953887 KO:K14376 Gene3D:3.30.70.590
SUPFAM:SSF55003 CTD:10914 GeneTree:ENSGT00390000017928
HOGENOM:HOG000204376 HOVERGEN:HBG053502 IPI:IPI00860939
RefSeq:NP_991321.2 UniGene:Dr.25690 SMR:Q5SNY2
Ensembl:ENSDART00000053858 GeneID:404041 KEGG:dre:404041
NextBio:20817515 Uniprot:Q5SNY2
Length = 723
Score = 919 (328.6 bits), Expect = 9.9e-95, Sum P(2) = 9.9e-95
Identities = 192/423 (45%), Positives = 268/423 (63%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF ++ L E EV +L V +A VPV+K
Sbjct: 100 GSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEKLKEQEEVKDLRAVEEAFVPVIKL 158
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
F G+ ID+L+ARL+L IPE+LD+ D +L+N D + +RSLNGCRVTD+IL LVP I+N
Sbjct: 159 AFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIEN 218
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNAV + LV +FF V+++W
Sbjct: 219 FRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKW 278
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL E+ +L L VWDPR P D+YHLMPIITPAYP NS+YNVS ST IM++
Sbjct: 279 EWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRAIMVE 338
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF+RG I + + +N+AD W LFE FF+ YK+Y+ + SA+ W G VES+
Sbjct: 339 EFKRGLAITDEILQNKAD--WSKLFEAPNFFQKYKHYIVLLASAQTEKQHLEWVGLVESK 396
Query: 313 LRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGL--QRKQGVP-VGEGE 364
+R L +E++ + L Q P P + +DK + + +G+ ++ +G +
Sbjct: 397 IRILVGNLEKNEFITLAHVNPQSFPGPKEGNDKEE-FSTMWVIGIVFKKMEGSENLNVDL 455
Query: 365 QFDIR-LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSR 423
FDI+ T ++QA++ + M+I+ HV R+ L + + S+ K + D
Sbjct: 456 TFDIQSFTDTVYRQAITSKMFEQD-MKITAMHVKRKQLHQLLPEVAIHRSK-RKHSSDGV 513
Query: 424 RAL 426
RA+
Sbjct: 514 RAM 516
Score = 43 (20.2 bits), Expect = 9.9e-95, Sum P(2) = 9.9e-95
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 511 TDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSK-DAEKLAIEK 560
T ++G + ++H VDG + KG + S S +EK E+
Sbjct: 560 TSELQGKTEATGENTHLASVDGTSSSNASGKGAAPPQSTSPIQSEKKPSEQ 610
>RGD|1310337 [details] [associations]
symbol:Papolg "poly(A) polymerase gamma" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1310337 GO:GO:0005634 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
CTD:64895 OrthoDB:EOG4R23T8 EMBL:CH473996 IPI:IPI00365079
RefSeq:NP_001100714.1 UniGene:Rn.27992 Ensembl:ENSRNOT00000008919
GeneID:305586 KEGG:rno:305586 UCSC:RGD:1310337 NextBio:654829
Uniprot:D3ZAN6
Length = 739
Score = 911 (325.7 bits), Expect = 1.8e-93, Sum P(2) = 1.8e-93
Identities = 191/441 (43%), Positives = 269/441 (60%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L V L V DA VPV+KF
Sbjct: 100 GSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGVRNLRAVEDAFVPVIKF 158
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP +
Sbjct: 159 EFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKET 218
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V+++W
Sbjct: 219 FRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKW 278
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST +M++
Sbjct: 279 EWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVE 338
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF++G + + + + ++D W L EP FF+ Y++Y+ + SA ++ W G VES+
Sbjct: 339 EFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESK 396
Query: 313 LRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDI 368
+R L +ER+ + + +P PG+ Y S +F+G+ ++ V E D+
Sbjct: 397 IRVLVGNLERNEFITLAHVNPQSFPGNKEHHKANNYVSMWFLGIIFRR-VENAESVNIDL 455
Query: 369 RLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRR 424
++ F V + + K GM+I HV ++ L +++ P + + K D R
Sbjct: 456 TYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL-PAEILQKK-KKSLSDVSR 513
Query: 425 A---LERKVSSHTKPGADDGR 442
+ L+ K SS D R
Sbjct: 514 SSGGLQSKRSSLDSNCLDSSR 534
Score = 39 (18.8 bits), Expect = 1.8e-93, Sum P(2) = 1.8e-93
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 404 FVFPGGV-RPSRPSKGTWDSRRA 425
F PG +PS P T D+ R+
Sbjct: 542 FNSPGSAHKPSNPDSPTGDAERS 564
>UNIPROTKB|A5D7N5 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 CTD:64895 OMA:IDGSSKR OrthoDB:EOG4R23T8
EMBL:DAAA02031008 EMBL:DAAA02031009 EMBL:BC140625 IPI:IPI00695296
RefSeq:NP_001091535.1 UniGene:Bt.24299 SMR:A5D7N5
Ensembl:ENSBTAT00000009749 GeneID:529071 KEGG:bta:529071
InParanoid:A5D7N5 NextBio:20874959 Uniprot:A5D7N5
Length = 740
Score = 917 (327.9 bits), Expect = 5.0e-92, P = 5.0e-92
Identities = 192/462 (41%), Positives = 277/462 (59%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L + L V DA VPV+KF
Sbjct: 100 GSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKF 158
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
+F G+ IDL++ARL++ I E+LD+ DS L++ D + +RSLNGCRVTD+IL LVP +
Sbjct: 159 EFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKET 218
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V+++W
Sbjct: 219 FRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKW 278
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST +M++
Sbjct: 279 EWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVE 338
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF++G + + + + ++D W L EP FF+ Y++Y+ + SA ++ W G VES+
Sbjct: 339 EFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESK 396
Query: 313 LRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDI 368
+R L +ER+ + + +P PG+ Y S +F+G+ ++ V E D+
Sbjct: 397 IRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESVNIDL 455
Query: 369 RLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRR 424
++ F V + + K GM+I HV ++ L +++ P + + + D R
Sbjct: 456 TYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-PAEILQKKKKQSLSDVTR 514
Query: 425 ALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS 466
+ S + ++ + TD+ +T N+ A PS
Sbjct: 515 SSSGPQSKRSSLDSNCLDSSRDTDN--ETPF-NSPVSANKPS 553
>UNIPROTKB|F1SQL7 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 KO:K14376 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 CTD:64895 OMA:IDGSSKR EMBL:CU467691
RefSeq:XP_003125156.1 UniGene:Ssc.62549 Ensembl:ENSSSCT00000009186
GeneID:100523547 KEGG:ssc:100523547 Uniprot:F1SQL7
Length = 741
Score = 913 (326.5 bits), Expect = 1.3e-91, P = 1.3e-91
Identities = 190/462 (41%), Positives = 275/462 (59%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L + L V DA VPV+KF
Sbjct: 100 GSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKF 158
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP +
Sbjct: 159 EFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKET 218
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V+++W
Sbjct: 219 FRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKW 278
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST +M++
Sbjct: 279 EWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVE 338
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF++G + + + + ++D W L EP FF+ Y++Y+ + SA ++ W G VES+
Sbjct: 339 EFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESK 396
Query: 313 LRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDI 368
+R L +ER+ + + +P PG+ Y S +F+G+ ++ V E D+
Sbjct: 397 IRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESVNIDL 455
Query: 369 RLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRR 424
++ F V + + K GM+I HV ++ L +++ P + + + D R
Sbjct: 456 TYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-PAEILQKKKKQSLSDVTR 514
Query: 425 ALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS 466
+ S + ++ + TD+ N+ A PS
Sbjct: 515 SSSGPQSKRSSLDSNCLDSSRDTDNGTPF---NSPVSANKPS 553
>MGI|MGI:2442119 [details] [associations]
symbol:Papolg "poly(A) polymerase gamma" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0006378 "mRNA polyadenylation" evidence=IBA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
MGI:MGI:2442119 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 CTD:64895 OMA:IDGSSKR OrthoDB:EOG4R23T8
EMBL:DQ103505 EMBL:AK035810 EMBL:AL662810 EMBL:BC059271
IPI:IPI00317437 RefSeq:NP_766143.2 UniGene:Mm.470599 HSSP:P25500
ProteinModelPortal:Q6PCL9 SMR:Q6PCL9 PhosphoSite:Q6PCL9
PaxDb:Q6PCL9 PRIDE:Q6PCL9 Ensembl:ENSMUST00000020513 GeneID:216578
KEGG:mmu:216578 UCSC:uc007ifp.2 InParanoid:Q6PCL9 NextBio:375224
Bgee:Q6PCL9 CleanEx:MM_PAPOLG Genevestigator:Q6PCL9
GermOnline:ENSMUSG00000020273 Uniprot:Q6PCL9
Length = 739
Score = 912 (326.1 bits), Expect = 1.7e-91, P = 1.7e-91
Identities = 196/466 (42%), Positives = 277/466 (59%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L + L V DA VPV+KF
Sbjct: 100 GSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKF 158
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP +
Sbjct: 159 EFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKET 218
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V+++W
Sbjct: 219 FRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKW 278
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST +M++
Sbjct: 279 EWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVE 338
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF++G + + + + ++D W L EP FF+ Y++Y+ + SA ++ W G VES+
Sbjct: 339 EFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESK 396
Query: 313 LRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDI 368
+R L +ER+ + + +P PG+ Y S +F+G+ ++ V E D+
Sbjct: 397 IRVLVGNLERNEFITLAHVNPQSFPGNKEHHKANNYVSMWFLGIIFRR-VENAESVNIDL 455
Query: 369 RLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRR 424
++ F V + + K GM+I HV ++ L +++ P + + K D R
Sbjct: 456 TYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL-PAEILQKK-KKSLSDVSR 513
Query: 425 A---LERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSS 467
+ L+ K SS D R TD N+ A PS+
Sbjct: 514 SSGGLQSKRSSLDSTCLDSSR---DTDSGTPF---NSPVSANKPSN 553
>MGI|MGI:1932115 [details] [associations]
symbol:Papolb "poly (A) polymerase beta (testis specific)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISS;ISA;IBA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IPI] [GO:0006369 "termination of RNA polymerase
II transcription" evidence=IBA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 MGI:MGI:1932115 GO:GO:0005783
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 GO:GO:0043631 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
HOVERGEN:HBG053502 CTD:56903 OMA:FPGGVAW OrthoDB:EOG4THVSN
EMBL:AF039957 EMBL:AB030729 IPI:IPI00230087 RefSeq:NP_064327.1
UniGene:Mm.441372 ProteinModelPortal:Q9WVP6 SMR:Q9WVP6
MINT:MINT-6167909 STRING:Q9WVP6 PhosphoSite:Q9WVP6 PaxDb:Q9WVP6
PRIDE:Q9WVP6 GeneID:56522 KEGG:mmu:56522 InParanoid:Q9WVP6
NextBio:312850 Bgee:Q9WVP6 CleanEx:MM_PAPOLB Genevestigator:Q9WVP6
Uniprot:Q9WVP6
Length = 641
Score = 887 (317.3 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 187/406 (46%), Positives = 256/406 (63%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L EV +L V +A VPV+K
Sbjct: 101 GSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKL 159
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I +
Sbjct: 160 CFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDS 219
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 220 FRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLVFSEW 279
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++
Sbjct: 280 EWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMIE 339
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF++G I + N+A+ W LFE +FF+ YK+Y+ + SA W G VES+
Sbjct: 340 EFKQGLAITHEILLNKAE--WSKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGLVESK 397
Query: 313 LRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQ---GVPVGEGE 364
+R L +E++ + L Q P P + +DK + + +GL K+ +
Sbjct: 398 IRILVGSLEKNEFITLAHVNPQSFPAPKETADKEE-FRTMWVIGLVLKKPENSEILSIDL 456
Query: 365 QFDIR-LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNL----PNFV 405
+DI+ T ++QA++ + + M+I+ H+ R+ L PN V
Sbjct: 457 TYDIQSFTDTVYRQAINS-KMFEMDMKIAAMHLRRKELHQLLPNHV 501
Score = 43 (20.2 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 507 ENNLTDSIRGSRNSVEVSSHNGKVD-GPMIGDPRNK 541
+++L SI S NS+ S G + GP+ G+P+ +
Sbjct: 520 DSSLLLSI-DSENSMTAPSPTGTMKTGPLTGNPQGR 554
>UNIPROTKB|J9NS30 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 OMA:IDGSSKR EMBL:AAEX03007549
Ensembl:ENSCAFT00000044895 Uniprot:J9NS30
Length = 813
Score = 906 (324.0 bits), Expect = 7.3e-91, P = 7.3e-91
Identities = 182/421 (43%), Positives = 262/421 (62%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L + L V DA VPV+KF
Sbjct: 100 GSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKF 158
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVT++IL LVP +
Sbjct: 159 EFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTNEILHLVPNKET 218
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V+++W
Sbjct: 219 FRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKW 278
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST +M++
Sbjct: 279 EWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVE 338
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF++G + + + + ++D W L EP FF+ Y++Y+ + SA ++ W G VES+
Sbjct: 339 EFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESK 396
Query: 313 LRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDI 368
+R L +ER+ + + +P PG+ Y S +F+G+ ++ V E D+
Sbjct: 397 IRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESVNIDL 455
Query: 369 RLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRR 424
++ F V + + K GM+I HV ++ L +++ P + + + D R
Sbjct: 456 TYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-PAEILQKKKKQSLSDVSR 514
Query: 425 A 425
+
Sbjct: 515 S 515
>UNIPROTKB|F1NKG9 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006378 "mRNA polyadenylation" evidence=IBA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0005737
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 CTD:10914
GeneTree:ENSGT00390000017928 OMA:SPVTTQG EMBL:AADN02003685
IPI:IPI00820771 RefSeq:NP_001185530.1 UniGene:Gga.4316
Ensembl:ENSGALT00000037556 GeneID:395878 KEGG:gga:395878
NextBio:20815945 ArrayExpress:F1NKG9 Uniprot:F1NKG9
Length = 737
Score = 904 (323.3 bits), Expect = 1.2e-90, P = 1.2e-90
Identities = 189/406 (46%), Positives = 252/406 (62%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF ++ L + EV +L V +A VPV+K
Sbjct: 100 GSYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKL 158
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I N
Sbjct: 159 CFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDN 218
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 219 FRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 278
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++
Sbjct: 279 EWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVE 338
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF++G I + + ++A+ W LFE FF+ YK+Y+ + SA W G VES+
Sbjct: 339 EFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESK 396
Query: 313 LRQLTLKIERHTYNMLQCHPHPGDF-SDKSKPLYCSY----FMGLQRKQGVPVGEGEQFD 367
+R L +E++ + L H +P F + K P Y +GL K+ E D
Sbjct: 397 IRILVGNLEKNEFITL-AHVNPQSFPAPKENPDKEEYRTMWVIGLVFKK-TENSENLSVD 454
Query: 368 IRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNL----PNFV 405
+ ++ F V + M+I+ HV R+ L PN V
Sbjct: 455 LTYDIQSFTDTVYRQAINSKMFEMDMKIAARHVKRKQLHQLLPNHV 500
>MGI|MGI:109301 [details] [associations]
symbol:Papola "poly (A) polymerase alpha" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IBA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0006369 "termination of
RNA polymerase II transcription" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
MGI:MGI:109301 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0000287 GO:GO:0006378 GO:GO:0003723 GO:GO:0030145
GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376 eggNOG:COG5186
Gene3D:3.30.70.590 SUPFAM:SSF55003 CTD:10914
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 OMA:SPVTTQG OrthoDB:EOG4J6RQB ChiTaRS:PAPOLA
EMBL:U52197 EMBL:U58134 EMBL:U58135 EMBL:AB086650 IPI:IPI00224655
IPI:IPI00224656 IPI:IPI00266738 IPI:IPI00467146 RefSeq:NP_035242.1
UniGene:Mm.255877 ProteinModelPortal:Q61183 SMR:Q61183
STRING:Q61183 PhosphoSite:Q61183 PaxDb:Q61183 PRIDE:Q61183
DNASU:18789 Ensembl:ENSMUST00000021535 Ensembl:ENSMUST00000109901
Ensembl:ENSMUST00000166735 GeneID:18789 KEGG:mmu:18789
UCSC:uc007oyv.1 UCSC:uc007oyx.1 InParanoid:Q61183 NextBio:295064
Bgee:Q61183 CleanEx:MM_PAPOLA Genevestigator:Q61183
GermOnline:ENSMUSG00000021111 Uniprot:Q61183
Length = 739
Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
Identities = 189/416 (45%), Positives = 252/416 (60%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L EV +L V +A VPV+K
Sbjct: 101 GSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKL 159
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I N
Sbjct: 160 CFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDN 219
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 220 FRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 279
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++
Sbjct: 280 EWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVE 339
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF++G I + + ++A+ W LFE FF+ YK+Y+ + SA W G VES+
Sbjct: 340 EFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESK 397
Query: 313 LRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFD 367
+R L +E++ + L H +P F + K P + +GL K+ E D
Sbjct: 398 IRILVGSLEKNEFITL-AHVNPQSFPAPKESPDREEFRTMWVIGLVFKK-TENSENLSVD 455
Query: 368 IRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 419
+ ++ F V + M+I+ HV R+ L + P V R T
Sbjct: 456 LTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL-PSHVLQKRKKHST 510
>UNIPROTKB|I3LRR6 [details] [associations]
symbol:PAPOLB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005783 GO:GO:0005634 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 OMA:FPGGVAW EMBL:CU928347
Ensembl:ENSSSCT00000031977 Uniprot:I3LRR6
Length = 636
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 191/414 (46%), Positives = 260/414 (62%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L EV +L V +A VPV+K
Sbjct: 115 GSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLHEEVKDLRAVEEAFVPVIKL 173
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I N
Sbjct: 174 CFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDN 233
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 234 FRLTLRAVKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLVFSEW 293
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++
Sbjct: 294 EWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMIE 353
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF++G I + ++A+ W LFE +FF+ YK+Y+ + SA W G VES+
Sbjct: 354 EFKQGLAITHEILLSKAE--WSKLFEAPSFFQKYKHYIALLASAPTEKQHLEWVGLVESK 411
Query: 313 LRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGL--QRKQGVPVGEGE- 364
+R L +E++ + L Q P P + DK + + +GL +R + + +
Sbjct: 412 IRILVGSLEKNEFITLAHVNPQSFPAPRESPDKEE-FRTMWVIGLVLKRPENSDILSIDL 470
Query: 365 QFDIR-LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNL----PNFVFPGGVRPS 413
+DI+ T ++QAV+ + + M+I+ H+ R+ L PN V P PS
Sbjct: 471 TYDIQSFTDTVYRQAVNS-KMFEMDMKIAAMHLRRKELHQLLPNHVLPQKKTPS 523
>UNIPROTKB|G3MYA2 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
taurus" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 EMBL:DAAA02053163
Ensembl:ENSBTAT00000063150 Uniprot:G3MYA2
Length = 718
Score = 898 (321.2 bits), Expect = 5.1e-90, P = 5.1e-90
Identities = 188/416 (45%), Positives = 252/416 (60%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L EV +L V +A VPV+K
Sbjct: 101 GSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKL 159
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I N
Sbjct: 160 CFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDN 219
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 220 FRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 279
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++
Sbjct: 280 EWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVE 339
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF++G I + + ++A+ W LFE FF+ YK+Y+ + SA W G VES+
Sbjct: 340 EFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESK 397
Query: 313 LRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFD 367
+R L +E++ + L H +P F + K P + +GL K+ E D
Sbjct: 398 IRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLVFKK-TENSENLSVD 455
Query: 368 IRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 419
+ ++ F V + M+I+ HV R+ L + P V + T
Sbjct: 456 LTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-PSHVLQKKKKHST 510
>UNIPROTKB|P25500 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IDA] [GO:0000287
"magnesium ion binding" evidence=IDA] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0043631 "RNA polyadenylation"
evidence=IDA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IDA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000287 GO:GO:0006378 GO:GO:0003723
GO:GO:0030145 GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003 EMBL:X61585
EMBL:X63436 IPI:IPI00686724 IPI:IPI00699231 PIR:S17875 PIR:S17925
PIR:S18642 RefSeq:NP_788820.1 UniGene:Bt.109586 PDB:1F5A PDB:1Q78
PDB:1Q79 PDBsum:1F5A PDBsum:1Q78 PDBsum:1Q79
ProteinModelPortal:P25500 SMR:P25500 STRING:P25500
Ensembl:ENSBTAT00000005300 GeneID:338051 KEGG:bta:338051 CTD:10914
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 InParanoid:P25500 OMA:SPVTTQG
EvolutionaryTrace:P25500 NextBio:20812502 ArrayExpress:P25500
Uniprot:P25500
Length = 739
Score = 898 (321.2 bits), Expect = 5.1e-90, P = 5.1e-90
Identities = 188/416 (45%), Positives = 252/416 (60%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L EV +L V +A VPV+K
Sbjct: 101 GSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKL 159
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I N
Sbjct: 160 CFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDN 219
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 220 FRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 279
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++
Sbjct: 280 EWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVE 339
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF++G I + + ++A+ W LFE FF+ YK+Y+ + SA W G VES+
Sbjct: 340 EFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESK 397
Query: 313 LRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFD 367
+R L +E++ + L H +P F + K P + +GL K+ E D
Sbjct: 398 IRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLVFKK-TENSENLSVD 455
Query: 368 IRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 419
+ ++ F V + M+I+ HV R+ L + P V + T
Sbjct: 456 LTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-PSHVLQKKKKHST 510
>UNIPROTKB|Q3T0A2 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
taurus" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003 UniGene:Bt.109586
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 OrthoDB:EOG4J6RQB EMBL:DAAA02053163
EMBL:BC102481 IPI:IPI00705304 SMR:Q3T0A2 STRING:Q3T0A2
Ensembl:ENSBTAT00000021001 Uniprot:Q3T0A2
Length = 693
Score = 898 (321.2 bits), Expect = 5.1e-90, P = 5.1e-90
Identities = 188/416 (45%), Positives = 252/416 (60%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L EV +L V +A VPV+K
Sbjct: 101 GSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKL 159
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I N
Sbjct: 160 CFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDN 219
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 220 FRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 279
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++
Sbjct: 280 EWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVE 339
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF++G I + + ++A+ W LFE FF+ YK+Y+ + SA W G VES+
Sbjct: 340 EFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESK 397
Query: 313 LRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFD 367
+R L +E++ + L H +P F + K P + +GL K+ E D
Sbjct: 398 IRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLVFKK-TENSENLSVD 455
Query: 368 IRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 419
+ ++ F V + M+I+ HV R+ L + P V + T
Sbjct: 456 LTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-PSHVLQKKKKHST 510
>UNIPROTKB|F1PDS0 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IBA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0005737 GO:GO:0006378 GO:GO:0003723
GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 OMA:SPVTTQG
EMBL:AAEX03005970 EMBL:AAEX03005971 Ensembl:ENSCAFT00000028221
Uniprot:F1PDS0
Length = 745
Score = 898 (321.2 bits), Expect = 5.1e-90, P = 5.1e-90
Identities = 188/406 (46%), Positives = 250/406 (61%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L EV +L V +A VPV+K
Sbjct: 107 GSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKL 165
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I N
Sbjct: 166 CFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDN 225
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 226 FRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 285
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++
Sbjct: 286 EWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVE 345
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF++G I + + ++A+ W LFE FF+ YK+Y+ + SA W G VES+
Sbjct: 346 EFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESK 403
Query: 313 LRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFD 367
+R L +E++ + L H +P F + K P + +GL K+ E D
Sbjct: 404 IRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLVFKK-TENSENLSVD 461
Query: 368 IRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNL----PNFV 405
+ ++ F V + M+I+ HV R+ L PN V
Sbjct: 462 LTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHV 507
>UNIPROTKB|G3XAH6 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 EMBL:AL163051
Gene3D:3.30.70.590 SUPFAM:SSF55003 HGNC:HGNC:14981 ChiTaRS:PAPOLA
ProteinModelPortal:G3XAH6 SMR:G3XAH6 Ensembl:ENST00000392990
ArrayExpress:G3XAH6 Bgee:G3XAH6 Uniprot:G3XAH6
Length = 724
Score = 898 (321.2 bits), Expect = 5.1e-90, P = 5.1e-90
Identities = 188/406 (46%), Positives = 250/406 (61%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L EV +L V +A VPV+K
Sbjct: 101 GSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKL 159
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I N
Sbjct: 160 CFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDN 219
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 220 FRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 279
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++
Sbjct: 280 EWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVE 339
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF++G I + + ++A+ W LFE FF+ YK+Y+ + SA W G VES+
Sbjct: 340 EFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESK 397
Query: 313 LRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFD 367
+R L +E++ + L H +P F + K P + +GL K+ E D
Sbjct: 398 IRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLVFKK-TENSENLSVD 455
Query: 368 IRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNL----PNFV 405
+ ++ F V + M+I+ HV R+ L PN V
Sbjct: 456 LTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHV 501
>UNIPROTKB|P51003 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IBA] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006378 "mRNA
polyadenylation" evidence=NAS] [GO:0003723 "RNA binding"
evidence=NAS] [GO:0043631 "RNA polyadenylation" evidence=ISS]
[GO:0000287 "magnesium ion binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0030145 "manganese ion binding"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0031124 "mRNA 3'-end processing"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_71 InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005524 GO:GO:0005737 GO:GO:0005654 GO:GO:0000287
Reactome:REACT_1675 GO:GO:0006378 GO:GO:0003723 GO:GO:0030145
GO:GO:0000398 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0004652
Reactome:REACT_78 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 CTD:10914 HOVERGEN:HBG053502 OMA:SPVTTQG
EMBL:BC000927 EMBL:BC036014 EMBL:BX248301 EMBL:BX248753
EMBL:BX161482 EMBL:X76770 IPI:IPI00384028 IPI:IPI01025082
RefSeq:NP_001238935.1 RefSeq:NP_001238936.1 RefSeq:NP_116021.2
UniGene:Hs.253726 ProteinModelPortal:P51003 SMR:P51003
DIP:DIP-27610N IntAct:P51003 MINT:MINT-125699 STRING:P51003
PhosphoSite:P51003 DMDM:59803092 PaxDb:P51003 PeptideAtlas:P51003
PRIDE:P51003 Ensembl:ENST00000216277 Ensembl:ENST00000557320
Ensembl:ENST00000557471 GeneID:10914 KEGG:hsa:10914 UCSC:uc001yfo.3
UCSC:uc001yfq.3 GeneCards:GC14P096969 HGNC:HGNC:14981 HPA:HPA001788
MIM:605553 neXtProt:NX_P51003 PharmGKB:PA32932 InParanoid:P51003
OrthoDB:EOG4J6RQB PhylomeDB:P51003 ChiTaRS:PAPOLA GenomeRNAi:10914
NextBio:41453 ArrayExpress:P51003 Bgee:P51003 CleanEx:HS_PAPOLA
Genevestigator:P51003 GermOnline:ENSG00000090060 Uniprot:P51003
Length = 745
Score = 898 (321.2 bits), Expect = 5.1e-90, P = 5.1e-90
Identities = 188/406 (46%), Positives = 250/406 (61%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L EV +L V +A VPV+K
Sbjct: 101 GSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKL 159
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I N
Sbjct: 160 CFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDN 219
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 220 FRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 279
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++
Sbjct: 280 EWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVE 339
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF++G I + + ++A+ W LFE FF+ YK+Y+ + SA W G VES+
Sbjct: 340 EFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESK 397
Query: 313 LRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFD 367
+R L +E++ + L H +P F + K P + +GL K+ E D
Sbjct: 398 IRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLVFKK-TENSENLSVD 455
Query: 368 IRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNL----PNFV 405
+ ++ F V + M+I+ HV R+ L PN V
Sbjct: 456 LTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHV 501
>UNIPROTKB|F1SAQ7 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 EMBL:CT827800
Ensembl:ENSSSCT00000002783 Uniprot:F1SAQ7
Length = 693
Score = 898 (321.2 bits), Expect = 5.1e-90, P = 5.1e-90
Identities = 188/406 (46%), Positives = 250/406 (61%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L EV +L V +A VPV+K
Sbjct: 101 GSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKL 159
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I N
Sbjct: 160 CFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDN 219
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 220 FRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 279
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++
Sbjct: 280 EWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVE 339
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF++G I + + ++A+ W LFE FF+ YK+Y+ + SA W G VES+
Sbjct: 340 EFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESK 397
Query: 313 LRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFD 367
+R L +E++ + L H +P F + K P + +GL K+ E D
Sbjct: 398 IRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLVFKK-TENSENLSVD 455
Query: 368 IRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNL----PNFV 405
+ ++ F V + M+I+ HV R+ L PN V
Sbjct: 456 LTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHV 501
>UNIPROTKB|I3L6F0 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 OMA:SPVTTQG EMBL:CT827800
Ensembl:ENSSSCT00000027948 Uniprot:I3L6F0
Length = 734
Score = 898 (321.2 bits), Expect = 5.1e-90, P = 5.1e-90
Identities = 188/406 (46%), Positives = 250/406 (61%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L EV +L V +A VPV+K
Sbjct: 117 GSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKL 175
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I N
Sbjct: 176 CFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDN 235
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 236 FRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 295
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++
Sbjct: 296 EWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVE 355
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF++G I + + ++A+ W LFE FF+ YK+Y+ + SA W G VES+
Sbjct: 356 EFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESK 413
Query: 313 LRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFD 367
+R L +E++ + L H +P F + K P + +GL K+ E D
Sbjct: 414 IRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLVFKK-TENSENLSVD 471
Query: 368 IRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNL----PNFV 405
+ ++ F V + M+I+ HV R+ L PN V
Sbjct: 472 LTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHV 517
>FB|FBgn0015949 [details] [associations]
symbol:hrg "hiiragi" species:7227 "Drosophila melanogaster"
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IDA;NAS] [GO:0006378 "mRNA polyadenylation"
evidence=ISS;IBA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HSSP:P25500 EMBL:AY113434 ProteinModelPortal:Q8MZ09
SMR:Q8MZ09 STRING:Q8MZ09 PaxDb:Q8MZ09 PRIDE:Q8MZ09
FlyBase:FBgn0015949 InParanoid:Q8MZ09 OrthoDB:EOG42547T ChiTaRS:HRG
ArrayExpress:Q8MZ09 Bgee:Q8MZ09 Uniprot:Q8MZ09
Length = 659
Score = 854 (305.7 bits), Expect = 7.1e-90, Sum P(2) = 7.1e-90
Identities = 162/328 (49%), Positives = 223/328 (67%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PR+ R D+F ++L + PEVTE V +A VPV+K
Sbjct: 109 GSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVPVIKM 167
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
F G+ IDLL+ARLSL IP+D D+ D++L+N D ++VRSLNGCRVTD+IL LVP I+N
Sbjct: 168 NFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIEN 227
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR CQLYPNA + LV +FF V+++W
Sbjct: 228 FRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSRW 287
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
+WPNPVLL + +L QVWDPR N D+YHLMPIITPAYP NS++NVS ST ++++
Sbjct: 288 KWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVILT 347
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF RG I + + + W+ LFE +FF Y++++ + ++++ ADD W G VES+
Sbjct: 348 EFNRGMNITDEIMLGR--IPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVESK 405
Query: 313 LRQLTLKIERHTYNMLQCHPHPGDFSDK 340
+R L +ER+ + L H +P F K
Sbjct: 406 VRLLISNLERNPHIAL-AHVNPKCFEFK 432
Score = 62 (26.9 bits), Expect = 7.1e-90, Sum P(2) = 7.1e-90
Identities = 22/81 (27%), Positives = 40/81 (49%)
Query: 341 SKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAH 395
S P +CS +F+GL+ ++ E D+ +++ F + V M+ + K GM I H
Sbjct: 462 SAP-FCSMWFIGLEFERS----ENLNVDLTESIQNFTEHVMMHGVNIKMLKEGMTIDARH 516
Query: 396 VTRRNLPNFVFPGGVRPSRPS 416
V R+ L ++ ++ R S
Sbjct: 517 VKRKQLSLYLDSDFLKRERKS 537
>UNIPROTKB|Q9NRJ5 [details] [associations]
symbol:PAPOLB "Poly(A) polymerase beta" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IBA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0006378 GO:GO:0003723
EMBL:AC092610 GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
HOVERGEN:HBG053502 EMBL:AF218840 EMBL:BC036653 IPI:IPI00024525
RefSeq:NP_064529.4 UniGene:Hs.487409 ProteinModelPortal:Q9NRJ5
SMR:Q9NRJ5 STRING:Q9NRJ5 PhosphoSite:Q9NRJ5 DMDM:18203318
PaxDb:Q9NRJ5 PRIDE:Q9NRJ5 DNASU:56903 Ensembl:ENST00000404991
GeneID:56903 KEGG:hsa:56903 CTD:56903 GeneCards:GC07M004897
HGNC:HGNC:15970 MIM:607436 neXtProt:NX_Q9NRJ5 PharmGKB:PA32933
InParanoid:Q9NRJ5 OMA:FPGGVAW OrthoDB:EOG4THVSN GenomeRNAi:56903
NextBio:62363 ArrayExpress:Q9NRJ5 Bgee:Q9NRJ5 CleanEx:HS_PAPOLB
Genevestigator:Q9NRJ5 Uniprot:Q9NRJ5
Length = 636
Score = 891 (318.7 bits), Expect = 2.8e-89, P = 2.8e-89
Identities = 192/429 (44%), Positives = 265/429 (61%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV P H R DFF + L EV +L V +A VPV+K
Sbjct: 101 GSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKLKLQEEVKDLRAVEEAFVPVIKL 159
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I N
Sbjct: 160 CFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDN 219
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNAV S LV +FF V+++W
Sbjct: 220 FRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLVFSEW 279
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++
Sbjct: 280 EWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSISTRMVMIE 339
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF++G I + ++A+ W LFE +FF+ YK+Y+ + SA W G VES+
Sbjct: 340 EFKQGLAITHEILLSKAE--WSKLFEAPSFFQKYKHYIVLLASASTEKQHLEWVGLVESK 397
Query: 313 LRQLTLKIERHTYNMLQCHPHPGDF-SDKSKPLYCSYF------MGLQRKQGVPVGEGE- 364
+R L +E++ + L H +P F + K P + +GL++ + +
Sbjct: 398 IRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWVIGLGLKKPDNSEILSIDL 456
Query: 365 QFDIR-LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSR 423
+DI+ T ++QAV+ + + GM+I+ H+ R+ L + P V + + T + R
Sbjct: 457 TYDIQSFTDTVYRQAVNS-KMFEMGMKITAMHLRRKELHQLL-PHHVLQDKKAHST-EGR 513
Query: 424 RALERKVSS 432
R + SS
Sbjct: 514 RLTDLNDSS 522
>RGD|1310946 [details] [associations]
symbol:Papolb "poly (A) polymerase beta (testis specific)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=ISO] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1310946 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 EMBL:CH474012 GO:GO:0004652 GO:GO:0043631 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOVERGEN:HBG053502 CTD:56903
EMBL:BC079046 IPI:IPI00363752 RefSeq:NP_001012020.1
UniGene:Rn.210888 SMR:Q6AYH1 GeneID:304300 KEGG:rno:304300
UCSC:RGD:1310946 NextBio:652828 Genevestigator:Q6AYH1
Uniprot:Q6AYH1
Length = 642
Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
Identities = 187/406 (46%), Positives = 255/406 (62%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L EV +L V +A VPV+K
Sbjct: 102 GSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKL 160
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I +
Sbjct: 161 CFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDS 220
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 221 FRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLVFSEW 280
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++
Sbjct: 281 EWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMIE 340
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF++G I + N+A+ W LFE +FF+ YK+Y+ + SA W G VES+
Sbjct: 341 EFKQGLAITHEILLNKAE--WSKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGLVESK 398
Query: 313 LRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQ---GVPVGEGE 364
+R L +E++ + L Q P P + DK + + +GL K+ +
Sbjct: 399 IRILVGSLEKNEFITLAHVNPQSFPAPKENVDKEE-FRTMWVIGLVLKKPENSEILSIDL 457
Query: 365 QFDIR-LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNL----PNFV 405
+DI+ T ++QA++ + + M+I+ H+ R+ L PN V
Sbjct: 458 TYDIQSFTDTVYRQAINS-KMFEMDMKIAAMHLRRKELHQLLPNHV 502
>UNIPROTKB|F1NL95 [details] [associations]
symbol:F1NL95 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008811
"chloramphenicol O-acetyltransferase activity" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] InterPro:IPR001707
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 ProDom:PD002660 GO:GO:0005634
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
GO:GO:0008811 EMBL:AADN02046885 EMBL:AADN02046884 IPI:IPI00600779
Ensembl:ENSGALT00000012751 OMA:RYHVMPI Uniprot:F1NL95
Length = 748
Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
Identities = 169/371 (45%), Positives = 241/371 (64%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L E+ L V DA+VPV+KF
Sbjct: 100 GSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQEEIKNLRAVEDAYVPVVKF 158
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
+F G+ IDL++ARL + + ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP +N
Sbjct: 159 EFDGIEIDLVFARLPVQTVSDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKEN 218
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
F+ TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQL+PNA+ S LV +FF ++++W
Sbjct: 219 FQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLHPNALASTLVHKFFLIFSKW 278
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL EE +L L VWDPR NP D+YH+MPIITPAYP NS+YNVSTST ++++
Sbjct: 279 EWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPAYPQQNSTYNVSTSTRAVVVE 338
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
E + G + + + +D W LFE FF+ YK+Y+ + S + W G VES+
Sbjct: 339 ELKHGLAVTNEILQGRSD--WPKLFEQPNFFQKYKHYIVLTASTYTEEHHLEWVGLVESK 396
Query: 313 LRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDI 368
+R L +ER+ + N+ +P PG+ + Y S +F+G+ ++ + E + D+
Sbjct: 397 IRVLVGNLERNEFINIAHVNPQSFPGNQEHCKQSRYVSMWFLGIIFRK-LESAESTKIDL 455
Query: 369 RLTVKEFKQAV 379
++ F AV
Sbjct: 456 TYDIQSFTDAV 466
>UNIPROTKB|F1P3A1 [details] [associations]
symbol:F1P3A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008811 "chloramphenicol
O-acetyltransferase activity" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR001707
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 ProDom:PD002660 GO:GO:0005634
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
GO:GO:0008811 EMBL:AADN02046885 EMBL:AADN02046884 IPI:IPI00820385
Ensembl:ENSGALT00000040310 Uniprot:F1P3A1
Length = 738
Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
Identities = 169/371 (45%), Positives = 241/371 (64%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L E+ L V DA+VPV+KF
Sbjct: 100 GSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQEEIKNLRAVEDAYVPVVKF 158
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
+F G+ IDL++ARL + + ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP +N
Sbjct: 159 EFDGIEIDLVFARLPVQTVSDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKEN 218
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
F+ TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQL+PNA+ S LV +FF ++++W
Sbjct: 219 FQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLHPNALASTLVHKFFLIFSKW 278
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPNPVLL EE +L L VWDPR NP D+YH+MPIITPAYP NS+YNVSTST ++++
Sbjct: 279 EWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPAYPQQNSTYNVSTSTRAVVVE 338
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
E + G + + + +D W LFE FF+ YK+Y+ + S + W G VES+
Sbjct: 339 ELKHGLAVTNEILQGRSD--WPKLFEQPNFFQKYKHYIVLTASTYTEEHHLEWVGLVESK 396
Query: 313 LRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDI 368
+R L +ER+ + N+ +P PG+ + Y S +F+G+ ++ + E + D+
Sbjct: 397 IRVLVGNLERNEFINIAHVNPQSFPGNQEHCKQSRYVSMWFLGIIFRK-LESAESTKIDL 455
Query: 369 RLTVKEFKQAV 379
++ F AV
Sbjct: 456 TYDIQSFTDAV 466
>WB|WBGene00009658 [details] [associations]
symbol:F43G6.5 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
OMA:FPGGVAW HSSP:P25500 EMBL:Z50070 EMBL:AL032651 PIR:C88325
PIR:T22140 RefSeq:NP_496524.1 ProteinModelPortal:G5EBX5 SMR:G5EBX5
EnsemblMetazoa:F43G6.5 GeneID:174816 KEGG:cel:CELE_F43G6.5
CTD:174816 WormBase:F43G6.5 NextBio:885628 Uniprot:G5EBX5
Length = 554
Score = 855 (306.0 bits), Expect = 1.8e-85, P = 1.8e-85
Identities = 185/465 (39%), Positives = 277/465 (59%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L+ G + VH GADIDTL + PRHATR DFF QML + PEVT L V +A VP
Sbjct: 95 LMAFGSYRLGVHSSGADIDTLVLAPRHATRA-DFFSSFKQMLAKDPEVTNLCAVENAFVP 153
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+M K+SG+ ID L+ARL+L +PEDLDI D++L+N D+++VRSLNGCRV + +L+LVP
Sbjct: 154 IMTMKYSGIEIDFLFARLALKEVPEDLDILDDALLKNLDQESVRSLNGCRVAENLLKLVP 213
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+NF TLR ++ WAK G+YSN GF GGI WA+LVAR CQLYPNA PS L+ + F +
Sbjct: 214 NQENFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQLYPNASPSKLIQKVFFI 273
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQ-----VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
++ W+WP PVLL I + L VWDPRRN D+YHLMPI+TPA+P NS++NVS
Sbjct: 274 FSTWKWPAPVLLDFISSDRMDLAQLNQLVWDPRRNQSDRYHLMPIVTPAFPQQNSTHNVS 333
Query: 244 TSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR 303
S+++++ +E + C+ ++ + W L E FF YK+++ + ++AE D
Sbjct: 334 RSSMKVIQEEMKDALITCDNIQNGSCN--WMDLLEEINFFSRYKHFISLSMTAETEKDEL 391
Query: 304 NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
+ G+ ESR+RQL L +E++ L H +P F P +F+GLQ + V
Sbjct: 392 AFGGFFESRIRQLVLILEKNQGIKL-AHINPKKFKAAKDPKKSVWFIGLQFDENV----- 445
Query: 364 EQFDIRLTVKEFK-----QAVSMYTLRKP-GMQISVAHVTRRNLPNFVFPGGVRPSRPSK 417
+ D+ +++FK QA S+ + ++ ++V R +L + ++ + K
Sbjct: 446 KNLDLTKDIQQFKRNIDYQAKSVKDIEANCAVETDFSYVKRSDLAQTISVKDLKQGKMYK 505
Query: 418 GTWDSRRAL--ERKVSSHTKPGADDGRKRKQTD-DNVDTHLRNAK 459
+S+ + +RKVS + P +K ++ +V++ L+N K
Sbjct: 506 KP-ESKDPVSKKRKVSENA-PSVPKKQKLDVSEKSSVESLLKNLK 548
>UNIPROTKB|F1NDP1 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
EMBL:AADN02003685 IPI:IPI00587050 Ensembl:ENSGALT00000018089
ArrayExpress:F1NDP1 Uniprot:F1NDP1
Length = 620
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 178/386 (46%), Positives = 240/386 (62%)
Query: 33 PRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIP 92
PRH R DFF ++ L + EV +L V +A VPV+K F G+ ID+L+ARL+L IP
Sbjct: 2 PRHVERS-DFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIP 60
Query: 93 EDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSN 152
EDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN
Sbjct: 61 EDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSN 120
Query: 153 VAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQV 212
+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L V
Sbjct: 121 ILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPV 180
Query: 213 WDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD 272
WDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A+
Sbjct: 181 WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE-- 238
Query: 273 WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP 332
W LFE FF+ YK+Y+ + SA W G VES++R L +E++ + L H
Sbjct: 239 WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITL-AHV 297
Query: 333 HPGDF-SDKSKPLYCSY----FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP 387
+P F + K P Y +GL K+ E D+ ++ F V +
Sbjct: 298 NPQSFPAPKENPDKEEYRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSK 356
Query: 388 ----GMQISVAHVTRRNL----PNFV 405
M+I+ HV R+ L PN V
Sbjct: 357 MFEMDMKIAARHVKRKQLHQLLPNHV 382
>WB|WBGene00011791 [details] [associations]
symbol:T15H9.6 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 EMBL:Z47356 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
PIR:T24943 RefSeq:NP_496067.1 ProteinModelPortal:Q09995 SMR:Q09995
STRING:Q09995 EnsemblMetazoa:T15H9.6 GeneID:174513
KEGG:cel:CELE_T15H9.6 UCSC:T15H9.6 CTD:174513 WormBase:T15H9.6
InParanoid:Q09995 OMA:PFGSYRL NextBio:884348 Uniprot:Q09995
Length = 554
Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
Identities = 184/454 (40%), Positives = 266/454 (58%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
LI G + VH GADID++ V PRH TR DFF +L + PEVTEL V A VP
Sbjct: 90 LIPFGSYRLGVHSSGADIDSIVVAPRHITRS-DFFNSFKDILAKNPEVTELCAVEKAFVP 148
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+M K+SGV ID+L+ARL+L +PEDL+I DS+L+N DE++VRSLNGCRV +Q+L+LVP
Sbjct: 149 IMTLKYSGVDIDILFARLALKSVPEDLNILDDSLLKNLDEESVRSLNGCRVAEQLLKLVP 208
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+NF TLR ++ WAK G+YSN GF GGI WA+LVARICQLYPNA PS L+ + F +
Sbjct: 209 HQKNFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVARICQLYPNAAPSRLIQKVFFI 268
Query: 189 YTQWRWPNPVLL----C-AIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
++ W WP PVLL C + L VWDPRRN D+YHLMPIITPA+P NS++NVS
Sbjct: 269 FSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHADRYHLMPIITPAFPQQNSTHNVS 328
Query: 244 TSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR 303
S+++++ DE ++ IC+ + +E ++W L E FF Y +++ + + AE+ +
Sbjct: 329 RSSMKVIQDEMKKALIICDKI--HEGTLEWRDLLEEINFFSKYHHFIALKLKAESVKEEL 386
Query: 304 NWKGWVESRLRQLTLKIERHTYNMLQ-CHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGE 362
+ G+ ESR+RQL +E++ ++Q +P F D P +F+GL+ V
Sbjct: 387 AFGGFFESRIRQLVQILEKN--QVIQVAQINPRKFKDVKDPKKSIWFIGLEFVANV---- 440
Query: 363 GEQFDIRLTVKEFKQAVSMYTLR----KPGMQISV--AHVTRRNLPNFVFPGGVRPSRPS 416
+ D+ +++FK + ++ G Q+ + R NL N + + R
Sbjct: 441 -KNVDLTSDIQQFKMNIDRQSMSVKEIAAGCQVETDFTYEKRSNLINIISKKDLSCQRIM 499
Query: 417 KGTWDSRRALE--RKVSSHTKPGADDGRKRKQTD 448
K T S + R + H A +K+ + D
Sbjct: 500 KKTEVSVPVTKDSRNLKRHILDEAPTVQKKHKLD 533
>UNIPROTKB|Q09995 [details] [associations]
symbol:T15H9.6 "Protein T15H9.6" species:6239
"Caenorhabditis elegans" [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 EMBL:Z47356 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
PIR:T24943 RefSeq:NP_496067.1 ProteinModelPortal:Q09995 SMR:Q09995
STRING:Q09995 EnsemblMetazoa:T15H9.6 GeneID:174513
KEGG:cel:CELE_T15H9.6 UCSC:T15H9.6 CTD:174513 WormBase:T15H9.6
InParanoid:Q09995 OMA:PFGSYRL NextBio:884348 Uniprot:Q09995
Length = 554
Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
Identities = 184/454 (40%), Positives = 266/454 (58%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
LI G + VH GADID++ V PRH TR DFF +L + PEVTEL V A VP
Sbjct: 90 LIPFGSYRLGVHSSGADIDSIVVAPRHITRS-DFFNSFKDILAKNPEVTELCAVEKAFVP 148
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+M K+SGV ID+L+ARL+L +PEDL+I DS+L+N DE++VRSLNGCRV +Q+L+LVP
Sbjct: 149 IMTLKYSGVDIDILFARLALKSVPEDLNILDDSLLKNLDEESVRSLNGCRVAEQLLKLVP 208
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+NF TLR ++ WAK G+YSN GF GGI WA+LVARICQLYPNA PS L+ + F +
Sbjct: 209 HQKNFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVARICQLYPNAAPSRLIQKVFFI 268
Query: 189 YTQWRWPNPVLL----C-AIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
++ W WP PVLL C + L VWDPRRN D+YHLMPIITPA+P NS++NVS
Sbjct: 269 FSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHADRYHLMPIITPAFPQQNSTHNVS 328
Query: 244 TSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR 303
S+++++ DE ++ IC+ + +E ++W L E FF Y +++ + + AE+ +
Sbjct: 329 RSSMKVIQDEMKKALIICDKI--HEGTLEWRDLLEEINFFSKYHHFIALKLKAESVKEEL 386
Query: 304 NWKGWVESRLRQLTLKIERHTYNMLQ-CHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGE 362
+ G+ ESR+RQL +E++ ++Q +P F D P +F+GL+ V
Sbjct: 387 AFGGFFESRIRQLVQILEKN--QVIQVAQINPRKFKDVKDPKKSIWFIGLEFVANV---- 440
Query: 363 GEQFDIRLTVKEFKQAVSMYTLR----KPGMQISV--AHVTRRNLPNFVFPGGVRPSRPS 416
+ D+ +++FK + ++ G Q+ + R NL N + + R
Sbjct: 441 -KNVDLTSDIQQFKMNIDRQSMSVKEIAAGCQVETDFTYEKRSNLINIISKKDLSCQRIM 499
Query: 417 KGTWDSRRALE--RKVSSHTKPGADDGRKRKQTD 448
K T S + R + H A +K+ + D
Sbjct: 500 KKTEVSVPVTKDSRNLKRHILDEAPTVQKKHKLD 533
>POMBASE|SPBC646.04 [details] [associations]
symbol:pla1 "poly(A) polymerase Pla1" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IGI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IGI] [GO:0006378 "mRNA polyadenylation"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 PomBase:SPBC646.04 GO:GO:0005829
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0006378
GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0005847
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 OMA:FPGGVAW EMBL:X79705
EMBL:AB027883 PIR:JC6058 RefSeq:NP_595362.1
ProteinModelPortal:Q10295 SMR:Q10295 MINT:MINT-2730388
STRING:Q10295 EnsemblFungi:SPBC646.04.1 GeneID:2541099
KEGG:spo:SPBC646.04 OrthoDB:EOG4SR150 NextBio:20802212
Uniprot:Q10295
Length = 566
Score = 824 (295.1 bits), Expect = 3.6e-82, P = 3.6e-82
Identities = 155/310 (50%), Positives = 219/310 (70%)
Query: 14 YDKY--SVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
Y Y V+GPG+DIDTL V P+H +R+ +FF +L ML E EVT+L VPDA+VP++K
Sbjct: 86 YGSYRLGVYGPGSDIDTLVVVPKHVSRD-NFFQDLEPMLREREEVTDLAAVPDAYVPIIK 144
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
FKF G+SIDL++ARLS+ +P DL++S +++L+ +E+ V SLNG RVTDQIL+LVP
Sbjct: 145 FKFLGISIDLIFARLSVPRVPRDLELSDNNLLKGVEERCVLSLNGTRVTDQILQLVPNRA 204
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
F+ LR ++FWA+RR +Y+NV GF GG+ WA++VARICQLYPNAV S++V++FFR+ Q
Sbjct: 205 VFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVARICQLYPNAVSSVIVAKFFRILHQ 264
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W WP P+LL IE+G L +++W+P+ P DK H MPIITPAYP M +++N++ ST I++
Sbjct: 265 WNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMPIITPAYPSMCATHNITLSTQTIIL 324
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
E R EI + + + W LF+ FF YK+YL I +A+ A+ W G VES
Sbjct: 325 REMVRAGEIADQIMVKA--LPWSALFQKHDFFHRYKHYLTITAAAKTAEAQLKWAGLVES 382
Query: 312 RLRQLTLKIE 321
+LR L ++E
Sbjct: 383 KLRHLVTRLE 392
>CGD|CAL0002451 [details] [associations]
symbol:PAP1 species:5476 "Candida albicans" [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISS;IDA]
[GO:0044011 "single-species biofilm formation on inanimate
substrate" evidence=IMP] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=IDA] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=IEA] [GO:0071050 "snoRNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 CGD:CAL0002451 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 EMBL:AACQ01000100 GO:GO:0044011 GO:GO:0004652
KO:K14376 EMBL:AF167162 EMBL:AB021667 RefSeq:XP_714613.1
ProteinModelPortal:Q9UW26 STRING:Q9UW26 GeneID:3643763
KEGG:cal:CaO19.3197 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 Uniprot:Q9UW26
Length = 555
Score = 786 (281.7 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 152/329 (46%), Positives = 222/329 (67%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + V+GPG+DIDTL V P+H +R DFF +++L E+ E+ PVPDA VP++K
Sbjct: 87 GSYRLGVYGPGSDIDTLVVVPKHVSRN-DFFEVFYELLKGRSELEEIAPVPDAFVPIIKI 145
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
+F+G+SIDL++ARL + +P DL + ++L+N DE+ +R+LNG RVTD+IL+LVPK
Sbjct: 146 EFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNIDEKDLRALNGTRVTDEILQLVPKPTV 205
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
F+ LRC++ WA++R VY N+ GF GG+ WA+LVARICQLYPNAV +++V +FF +Y+QW
Sbjct: 206 FKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSAVIVEKFFHIYSQW 265
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WP PVLL IE+G L ++VW+PR D+ H MP+ITPAYP M +++N+++ST ++++
Sbjct: 266 AWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITPAYPSMCATHNITSSTQKVILS 325
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAEN--ADDLRNWKGWVE 310
EFQRG E+ + N W L E FF YK YL I + + A+ L+ + G VE
Sbjct: 326 EFQRGIELMNDI--NVGKKSWSDLLERHDFFFRYKFYLCIVAATRSTYAEHLK-YSGMVE 382
Query: 311 SRLRQLTLKIERHTYNMLQCHPHPGDFSD 339
S+LR L K+E + HP+ F +
Sbjct: 383 SKLRLLVQKLEL-VEGIELAHPYVKSFEN 410
Score = 37 (18.1 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 532 GPMIGDPRNKGL--SFNSSNSKDAEKLAIEKIMSGPYV 567
G GD R KG+ + N+ N+K+ + +E M+ ++
Sbjct: 428 GTSKGDDRVKGVLHAENNDNNKENVENKVELHMTKLFI 465
>UNIPROTKB|Q9UW26 [details] [associations]
symbol:PAPA "Poly(A) polymerase PAPa" species:237561
"Candida albicans SC5314" [GO:0003723 "RNA binding" evidence=IDA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IDA] [GO:0006378 "mRNA polyadenylation" evidence=IDA]
[GO:0044011 "single-species biofilm formation on inanimate
substrate" evidence=IMP] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
CGD:CAL0002451 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 EMBL:AACQ01000100
GO:GO:0044011 GO:GO:0004652 KO:K14376 EMBL:AF167162 EMBL:AB021667
RefSeq:XP_714613.1 ProteinModelPortal:Q9UW26 STRING:Q9UW26
GeneID:3643763 KEGG:cal:CaO19.3197 eggNOG:COG5186
Gene3D:3.30.70.590 SUPFAM:SSF55003 Uniprot:Q9UW26
Length = 555
Score = 786 (281.7 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 152/329 (46%), Positives = 222/329 (67%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + V+GPG+DIDTL V P+H +R DFF +++L E+ E+ PVPDA VP++K
Sbjct: 87 GSYRLGVYGPGSDIDTLVVVPKHVSRN-DFFEVFYELLKGRSELEEIAPVPDAFVPIIKI 145
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
+F+G+SIDL++ARL + +P DL + ++L+N DE+ +R+LNG RVTD+IL+LVPK
Sbjct: 146 EFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNIDEKDLRALNGTRVTDEILQLVPKPTV 205
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
F+ LRC++ WA++R VY N+ GF GG+ WA+LVARICQLYPNAV +++V +FF +Y+QW
Sbjct: 206 FKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSAVIVEKFFHIYSQW 265
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WP PVLL IE+G L ++VW+PR D+ H MP+ITPAYP M +++N+++ST ++++
Sbjct: 266 AWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITPAYPSMCATHNITSSTQKVILS 325
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAEN--ADDLRNWKGWVE 310
EFQRG E+ + N W L E FF YK YL I + + A+ L+ + G VE
Sbjct: 326 EFQRGIELMNDI--NVGKKSWSDLLERHDFFFRYKFYLCIVAATRSTYAEHLK-YSGMVE 382
Query: 311 SRLRQLTLKIERHTYNMLQCHPHPGDFSD 339
S+LR L K+E + HP+ F +
Sbjct: 383 SKLRLLVQKLEL-VEGIELAHPYVKSFEN 410
Score = 37 (18.1 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 532 GPMIGDPRNKGL--SFNSSNSKDAEKLAIEKIMSGPYV 567
G GD R KG+ + N+ N+K+ + +E M+ ++
Sbjct: 428 GTSKGDDRVKGVLHAENNDNNKENVENKVELHMTKLFI 465
>WB|WBGene00012528 [details] [associations]
symbol:pap-1 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0007276 "gamete generation" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0006378
GO:GO:0010171 GO:GO:0040011 GO:GO:0048477 GO:GO:0006351
GO:GO:0003723 GO:GO:0040035 GO:GO:0040027 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
EMBL:AL021474 PIR:G89189 RefSeq:NP_505683.1
ProteinModelPortal:Q9U2P3 SMR:Q9U2P3 STRING:Q9U2P3 PaxDb:Q9U2P3
EnsemblMetazoa:Y32F6A.3.1 EnsemblMetazoa:Y32F6A.3.2 GeneID:179458
KEGG:cel:CELE_Y32F6A.3 UCSC:Y32F6A.3 CTD:179458 WormBase:Y32F6A.3
InParanoid:Q9U2P3 OMA:CEALEIC NextBio:905480 Uniprot:Q9U2P3
Length = 655
Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
Identities = 172/426 (40%), Positives = 254/426 (59%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + VH GADIDTL V PRH R DFF +ML P VTELH V +A VP
Sbjct: 88 LFTFGSYRLGVHSSGADIDTLAVVPRHIDRS-DFFTSFKEMLNNDPNVTELHGVEEAFVP 146
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VMK K+SGV +D+L+ARL+L +P+ ++S D++L+N D+++VRSLNGCRV +Q+L+LVP
Sbjct: 147 VMKLKYSGVELDILFARLALKEVPDTQELSDDNLLRNLDQESVRSLNGCRVAEQLLKLVP 206
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ + F TLR ++ WAK G+YSN GF GGI WA+LVAR CQLYPNA PS LV R F +
Sbjct: 207 RQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQLYPNASPSRLVHRMFFI 266
Query: 189 YTQWRWPNPVLLCAIEEG-----SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
++ W WP+PV+L + +L VWDPRR D++H+MPIITPA+P NS++NV+
Sbjct: 267 FSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVMPIITPAFPEQNSTHNVT 326
Query: 244 TSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR 303
ST ++ +E EIC + + ++ W LFE FF YK+++ + ++A N ++
Sbjct: 327 RSTATVIKNEICEALEICRDISEGKSK--WTALFEEVNFFSRYKHFIALIMAAPNEEEEL 384
Query: 304 NWKGWVESRLRQLTLKIERH-----TYNMLQCH-PHPG---DFSDKSKPLYCSYFMGLQR 354
N+ G++ESR+R L +ER+ +N H P P D + ++K + +F+GL+
Sbjct: 385 NYGGFLESRIRLLVQSLERNQDIIIAHNDPNKHKPSPNAKFDVNPENKRVTV-WFIGLEF 443
Query: 355 KQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGM------QISVAHVTRRNLPNFVFPG 408
+ + D+ ++ FK V + G+ QI + +V R +L +
Sbjct: 444 AE-----HAKTLDLTNEIQRFKTNVELQASNVKGIGPNCQVQIDMFYVKRNSLIQVISAA 498
Query: 409 GVRPSR 414
+R R
Sbjct: 499 DLRRGR 504
>UNIPROTKB|Q9U2P3 [details] [associations]
symbol:pap-1 "Protein PAP-1" species:6239 "Caenorhabditis
elegans" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0040010 GO:GO:0006915 GO:GO:0002119
GO:GO:0006378 GO:GO:0010171 GO:GO:0040011 GO:GO:0048477
GO:GO:0006351 GO:GO:0003723 GO:GO:0040035 GO:GO:0040027
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HSSP:P25500 EMBL:AL021474 PIR:G89189 RefSeq:NP_505683.1
ProteinModelPortal:Q9U2P3 SMR:Q9U2P3 STRING:Q9U2P3 PaxDb:Q9U2P3
EnsemblMetazoa:Y32F6A.3.1 EnsemblMetazoa:Y32F6A.3.2 GeneID:179458
KEGG:cel:CELE_Y32F6A.3 UCSC:Y32F6A.3 CTD:179458 WormBase:Y32F6A.3
InParanoid:Q9U2P3 OMA:CEALEIC NextBio:905480 Uniprot:Q9U2P3
Length = 655
Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
Identities = 172/426 (40%), Positives = 254/426 (59%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + VH GADIDTL V PRH R DFF +ML P VTELH V +A VP
Sbjct: 88 LFTFGSYRLGVHSSGADIDTLAVVPRHIDRS-DFFTSFKEMLNNDPNVTELHGVEEAFVP 146
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VMK K+SGV +D+L+ARL+L +P+ ++S D++L+N D+++VRSLNGCRV +Q+L+LVP
Sbjct: 147 VMKLKYSGVELDILFARLALKEVPDTQELSDDNLLRNLDQESVRSLNGCRVAEQLLKLVP 206
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ + F TLR ++ WAK G+YSN GF GGI WA+LVAR CQLYPNA PS LV R F +
Sbjct: 207 RQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQLYPNASPSRLVHRMFFI 266
Query: 189 YTQWRWPNPVLLCAIEEG-----SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
++ W WP+PV+L + +L VWDPRR D++H+MPIITPA+P NS++NV+
Sbjct: 267 FSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVMPIITPAFPEQNSTHNVT 326
Query: 244 TSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR 303
ST ++ +E EIC + + ++ W LFE FF YK+++ + ++A N ++
Sbjct: 327 RSTATVIKNEICEALEICRDISEGKSK--WTALFEEVNFFSRYKHFIALIMAAPNEEEEL 384
Query: 304 NWKGWVESRLRQLTLKIERH-----TYNMLQCH-PHPG---DFSDKSKPLYCSYFMGLQR 354
N+ G++ESR+R L +ER+ +N H P P D + ++K + +F+GL+
Sbjct: 385 NYGGFLESRIRLLVQSLERNQDIIIAHNDPNKHKPSPNAKFDVNPENKRVTV-WFIGLEF 443
Query: 355 KQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGM------QISVAHVTRRNLPNFVFPG 408
+ + D+ ++ FK V + G+ QI + +V R +L +
Sbjct: 444 AE-----HAKTLDLTNEIQRFKTNVELQASNVKGIGPNCQVQIDMFYVKRNSLIQVISAA 498
Query: 409 GVRPSR 414
+R R
Sbjct: 499 DLRRGR 504
>SGD|S000001710 [details] [associations]
symbol:PAP1 "Poly(A) polymerase, one of three factors
required for mRNA 3'-end pol" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA;IDA] [GO:0006378 "mRNA polyadenylation"
evidence=IDA;IMP] [GO:0005654 "nucleoplasm" evidence=IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071050 "snoRNA polyadenylation"
evidence=IGI] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 SGD:S000001710 GO:GO:0005524
GO:GO:0000287 GO:GO:0006378 GO:GO:0006351 EMBL:BK006944
GO:GO:0003723 GO:GO:0005847 GO:GO:0004652 EMBL:X65124
RefSeq:NP_012929.4 GeneID:853873 KEGG:sce:YKR004C PDB:3C66
PDBsum:3C66 RefSeq:NP_012927.3 GeneID:853871 KEGG:sce:YKR002W
KO:K14376 GO:GO:0071050 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
OMA:FPGGVAW OrthoDB:EOG4SR150 EMBL:X60307 EMBL:Z28227 PIR:S19031
PDB:1FA0 PDB:2HHP PDB:2O1P PDB:2Q66 PDBsum:1FA0 PDBsum:2HHP
PDBsum:2O1P PDBsum:2Q66 ProteinModelPortal:P29468 SMR:P29468
DIP:DIP-2297N IntAct:P29468 MINT:MINT-375429 STRING:P29468
PaxDb:P29468 PeptideAtlas:P29468 EnsemblFungi:YKR002W CYGD:YKR002w
EvolutionaryTrace:P29468 NextBio:975142 Genevestigator:P29468
GermOnline:YKR002W Uniprot:P29468
Length = 568
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 166/372 (44%), Positives = 232/372 (62%)
Query: 14 YDKY--SVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
Y Y VHGPG+DIDTL V P+H TRE DFF +L E E+ E+ PVPDA VP++K
Sbjct: 87 YGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDSLLRERKELDEIAPVPDAFVPIIK 145
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
KFSG+SIDL+ ARL +P L +S ++L+N DE+ +R+LNG RVTD+IL LVPK
Sbjct: 146 IKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPKPN 205
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
FR LR ++ WA+RR VY+N+ GF GG+ WA+LVARICQLYPNA +++++RFF + ++
Sbjct: 206 VFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFIILSE 265
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP M +++N++ ST ++++
Sbjct: 266 WNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKKVIL 325
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKGWVE 310
EF RG +I + N+ W LFE FF YK YL I +D+ W G VE
Sbjct: 326 QEFVRGVQITNDIFSNKKS--WANLFEKNDFFFRYKFYLEITAYTRGSDEQHLKWSGLVE 383
Query: 311 SRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIR 369
S++R L +K+E + HP F S P Y M +Q K G E ++
Sbjct: 384 SKVRLLVMKLEVLA-GIKIAHPFTKPFESSYCCPTEDDYEM-IQDKYGSHKTETALNALK 441
Query: 370 LTVKEFKQAVSM 381
L E K+ S+
Sbjct: 442 LVTDENKEEESI 453
>GENEDB_PFALCIPARUM|PFF1240w [details] [associations]
symbol:PFF1240w "poly(A) polymerase PAP,
putative" species:5833 "Plasmodium falciparum" [GO:0006378 "mRNA
polyadenylation" evidence=ISS] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 EMBL:AL844505 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376
ProtClustDB:PTZ00418 RefSeq:XP_966239.1 ProteinModelPortal:C6KT92
EnsemblProtists:PFF1240w:mRNA GeneID:3885690 KEGG:pfa:PFF1240w
EuPathDB:PlasmoDB:PF3D7_0625600 OMA:MEDENNI Uniprot:C6KT92
Length = 631
Score = 619 (223.0 bits), Expect = 5.2e-77, Sum P(2) = 5.2e-77
Identities = 125/262 (47%), Positives = 167/262 (63%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + V P +DID + + P++ TRE FF E + L + V +L +P+ + P
Sbjct: 159 LYTFGSYRLGVITPNSDIDCIFLAPQNLTREI-FFNEFYLKLQQDRNVKKLQALPETYTP 217
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
+++F + V IDLL A L + + + D IL+N DE TVRSLNG RV D IL V
Sbjct: 218 IIQFMYDDVDIDLLLATLPYKTLKDCYYSLDNDHILKNLDEVTVRSLNGIRVADLILNSV 277
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P FR TLR ++ WAK RG+YSN+ GFLGGI+WALL A+ICQLYPN S L+ +FF+
Sbjct: 278 PNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGISWALLTAKICQLYPNFNVSQLICKFFK 337
Query: 188 VYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
VY+ W W PVLL I+ EG VWDP +N KDK H+MPIITPA+PCMNS++NV+
Sbjct: 338 VYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMPIITPAFPCMNSTHNVT 397
Query: 244 TSTLRIMMDEFQRGHEICEAME 265
T I+++EF+R H I + ME
Sbjct: 398 YCTRNILIEEFKRAHSIIQYME 419
Score = 175 (66.7 bits), Expect = 5.2e-77, Sum P(2) = 5.2e-77
Identities = 53/196 (27%), Positives = 92/196 (46%)
Query: 267 NEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYN 326
N ++ W T+ EP F YK++L I I N +WKGW+ES++R L K+E T N
Sbjct: 444 NSSNNVWMTILEPLDLFSTYKHFLHIQIMGINEFIYNSWKGWIESKIRLLFKKLE--TIN 501
Query: 327 MLQCHPHPGD-FSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT- 383
L+ P P F K K YCS +F+ L P F++ +++F +
Sbjct: 502 ELKIRPFPKFYFYKKEKSYYCSSFFIALIFFYKNPYEN--TFNLSYAIRDFIDIALNWPQ 559
Query: 384 -LRKPG-MQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDG 441
++ P +I++ + R + F+ ++ +K ++ ++ ++H + G +
Sbjct: 560 KVKYPNAFKINIMYQKRSQVLEFLDIVTKEENQKNKQVMENN---DKDETNHNQNGYRNN 616
Query: 442 RKRKQTDDNVDTHLRN 457
K KQ D+ D HL N
Sbjct: 617 HKNKQFDE-YDDHLFN 631
Score = 41 (19.5 bits), Expect = 6.9e-63, Sum P(2) = 6.9e-63
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 488 LQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGK 529
L+F + E N++ +ENN D ++N ++H K
Sbjct: 580 LEFLDIVTKEENQKNKQVMENNDKDETNHNQNGYR-NNHKNK 620
>UNIPROTKB|C6KT92 [details] [associations]
symbol:PFF1240w "Poly(A) polymerase PAP, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=ISS;IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 EMBL:AL844505 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376
ProtClustDB:PTZ00418 RefSeq:XP_966239.1 ProteinModelPortal:C6KT92
EnsemblProtists:PFF1240w:mRNA GeneID:3885690 KEGG:pfa:PFF1240w
EuPathDB:PlasmoDB:PF3D7_0625600 OMA:MEDENNI Uniprot:C6KT92
Length = 631
Score = 619 (223.0 bits), Expect = 5.2e-77, Sum P(2) = 5.2e-77
Identities = 125/262 (47%), Positives = 167/262 (63%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + V P +DID + + P++ TRE FF E + L + V +L +P+ + P
Sbjct: 159 LYTFGSYRLGVITPNSDIDCIFLAPQNLTREI-FFNEFYLKLQQDRNVKKLQALPETYTP 217
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
+++F + V IDLL A L + + + D IL+N DE TVRSLNG RV D IL V
Sbjct: 218 IIQFMYDDVDIDLLLATLPYKTLKDCYYSLDNDHILKNLDEVTVRSLNGIRVADLILNSV 277
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P FR TLR ++ WAK RG+YSN+ GFLGGI+WALL A+ICQLYPN S L+ +FF+
Sbjct: 278 PNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGISWALLTAKICQLYPNFNVSQLICKFFK 337
Query: 188 VYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
VY+ W W PVLL I+ EG VWDP +N KDK H+MPIITPA+PCMNS++NV+
Sbjct: 338 VYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMPIITPAFPCMNSTHNVT 397
Query: 244 TSTLRIMMDEFQRGHEICEAME 265
T I+++EF+R H I + ME
Sbjct: 398 YCTRNILIEEFKRAHSIIQYME 419
Score = 175 (66.7 bits), Expect = 5.2e-77, Sum P(2) = 5.2e-77
Identities = 53/196 (27%), Positives = 92/196 (46%)
Query: 267 NEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYN 326
N ++ W T+ EP F YK++L I I N +WKGW+ES++R L K+E T N
Sbjct: 444 NSSNNVWMTILEPLDLFSTYKHFLHIQIMGINEFIYNSWKGWIESKIRLLFKKLE--TIN 501
Query: 327 MLQCHPHPGD-FSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT- 383
L+ P P F K K YCS +F+ L P F++ +++F +
Sbjct: 502 ELKIRPFPKFYFYKKEKSYYCSSFFIALIFFYKNPYEN--TFNLSYAIRDFIDIALNWPQ 559
Query: 384 -LRKPG-MQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDG 441
++ P +I++ + R + F+ ++ +K ++ ++ ++H + G +
Sbjct: 560 KVKYPNAFKINIMYQKRSQVLEFLDIVTKEENQKNKQVMENN---DKDETNHNQNGYRNN 616
Query: 442 RKRKQTDDNVDTHLRN 457
K KQ D+ D HL N
Sbjct: 617 HKNKQFDE-YDDHLFN 631
Score = 41 (19.5 bits), Expect = 6.9e-63, Sum P(2) = 6.9e-63
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 488 LQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGK 529
L+F + E N++ +ENN D ++N ++H K
Sbjct: 580 LEFLDIVTKEENQKNKQVMENNDKDETNHNQNGYR-NNHKNK 620
>RGD|1308673 [details] [associations]
symbol:Papola "poly (A) polymerase alpha" species:10116 "Rattus
norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISO;IBA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IBA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0043631 "RNA polyadenylation" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1308673 GO:GO:0005634 GO:GO:0005737
GO:GO:0006378 GO:GO:0003723 GO:GO:0000398 GO:GO:0006369
GO:GO:0004652 Gene3D:3.30.70.590 SUPFAM:SSF55003 IPI:IPI00567428
Ensembl:ENSRNOT00000047832 UCSC:RGD:1308673 ArrayExpress:F1MAC5
Uniprot:F1MAC5
Length = 681
Score = 633 (227.9 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 118/204 (57%), Positives = 146/204 (71%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L EV +L V +A VPV+K
Sbjct: 101 GSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKL 159
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I N
Sbjct: 160 CFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDN 219
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 220 FRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 279
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPR 216
WPNPVLL EE +L L VWDPR
Sbjct: 280 EWPNPVLLKQPEECNLNLPVWDPR 303
Score = 76 (31.8 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 36/157 (22%), Positives = 63/157 (40%)
Query: 273 WDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCH 331
WD FF + +++ +++ + R W G VES++R L +E++ + L H
Sbjct: 300 WDPRVSVL-FFPLQIHTVQLLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AH 357
Query: 332 PHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRK 386
+P F + K P + +GL K+ E D+ ++ F V +
Sbjct: 358 VNPQSFPAPKESPDREEFRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINS 416
Query: 387 P----GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 419
M+I+ HV R+ L + P V R T
Sbjct: 417 KMFELDMKIAAMHVKRKQLHQLL-PSHVLQKRKKHST 452
>UNIPROTKB|D4A764 [details] [associations]
symbol:Papola "Protein Papola" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1308673 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 Gene3D:3.30.70.590
SUPFAM:SSF55003 IPI:IPI00776821 Ensembl:ENSRNOT00000057215
ArrayExpress:D4A764 Uniprot:D4A764
Length = 657
Score = 549 (198.3 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 102/180 (56%), Positives = 129/180 (71%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L EV +L V +A VPV+K
Sbjct: 101 GSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKL 159
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I N
Sbjct: 160 CFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDN 219
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 220 FRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 279
Score = 75 (31.5 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 36/157 (22%), Positives = 63/157 (40%)
Query: 276 LFEPFTFFEAYKNYL---RIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCH 331
+F + F Y N + + +++ + R W G VES++R L +E++ + L H
Sbjct: 275 VFSKWYVFRLYYNKIDCRHVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AH 333
Query: 332 PHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRK 386
+P F + K P + +GL K+ E D+ ++ F V +
Sbjct: 334 VNPQSFPAPKESPDREEFRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINS 392
Query: 387 P----GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 419
M+I+ HV R+ L + P V R T
Sbjct: 393 KMFELDMKIAAMHVKRKQLHQLL-PSHVLQKRKKHST 428
>UNIPROTKB|H0YJ00 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR007012 Pfam:PF04928 GO:GO:0006351 GO:GO:0004652
EMBL:AL163051 HGNC:HGNC:14981 ChiTaRS:PAPOLA
Ensembl:ENST00000553461 Uniprot:H0YJ00
Length = 203
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 110/188 (58%), Positives = 137/188 (72%)
Query: 29 LCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSL 88
LCV PRH R DFF + L EV +L V +A VPV+K F G+ ID+L+ARL+L
Sbjct: 3 LCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLAL 61
Query: 89 WVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRG 148
IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR
Sbjct: 62 QTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHN 121
Query: 149 VYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSL 208
+YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L
Sbjct: 122 IYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNL 181
Query: 209 GLQVWDPR 216
L VWDPR
Sbjct: 182 NLPVWDPR 189
>TAIR|locus:2084274 [details] [associations]
symbol:PAPS3 "poly(A) polymerase 3" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA;ISS] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=RCA] InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0005737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 EMBL:AK221644 IPI:IPI00518099 RefSeq:NP_187308.3
UniGene:At.40500 ProteinModelPortal:Q56XM9 SMR:Q56XM9 IntAct:Q56XM9
STRING:Q56XM9 EnsemblPlants:AT3G06560.1 GeneID:819835
KEGG:ath:AT3G06560 TAIR:At3g06560 HOGENOM:HOG000006246
InParanoid:Q56XM9 OMA:IDETSWK PhylomeDB:Q56XM9
ProtClustDB:CLSN2699159 Genevestigator:Q56XM9 Uniprot:Q56XM9
Length = 507
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 133/345 (38%), Positives = 195/345 (56%)
Query: 12 LGYDKYS--VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 69
L Y Y V+G +DID LC+GP A+ EDFF L ML EV+ELH V DA VP+
Sbjct: 77 LPYGSYGLGVYGSESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKDAKVPL 136
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
++FKF G+ +DL YA+L + IP ++D+ L++ DE + + L+G R IL+LVP
Sbjct: 137 IRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQLVPS 196
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
++ F++ LRC++ WAKRRGVY N+ GFLGG++ A+L A +C PNA S L++ FF +
Sbjct: 197 LELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTF 256
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
W+WP PV+L S G P LMPI P + ++ ST
Sbjct: 257 AHWQWPTPVVLLEDTYPSTGA--------PPG---LMPIQLPCGSHQYCNSTITRSTFYK 305
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 309
++ EF GH + + K + W LFE + + Y + +I +SA N +DL +W GWV
Sbjct: 306 IVAEFLLGHNLTKDYLK--LNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWV 363
Query: 310 ESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-SKPLYCSYFMGLQ 353
+SR R L +KIE Y + C P+P ++ + +K ++ GLQ
Sbjct: 364 KSRFRCLLIKIEE-VYGI--CDPNPTEYVETYTKQPNIVFYWGLQ 405
>UNIPROTKB|F8WAT4 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007012 Pfam:PF01909 Pfam:PF04928
GO:GO:0006351 GO:GO:0004652 HGNC:HGNC:14982 EMBL:AC011245
EMBL:AC012498 IPI:IPI00893537 ProteinModelPortal:F8WAT4 SMR:F8WAT4
Ensembl:ENST00000414060 ArrayExpress:F8WAT4 Bgee:F8WAT4
Uniprot:F8WAT4
Length = 234
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 97/180 (53%), Positives = 127/180 (70%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L + L V DA VPV+KF
Sbjct: 56 GSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKF 114
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP +
Sbjct: 115 EFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKET 174
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V+++W
Sbjct: 175 FRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKW 234
>UNIPROTKB|G3V2A0 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
Pfam:PF04926 Pfam:PF04928 GO:GO:0005634 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 GO:GO:0043631 EMBL:AL163051 Gene3D:3.30.70.590
SUPFAM:SSF55003 HGNC:HGNC:14981 ChiTaRS:PAPOLA
ProteinModelPortal:G3V2A0 SMR:G3V2A0 Ensembl:ENST00000555626
ArrayExpress:G3V2A0 Bgee:G3V2A0 Uniprot:G3V2A0
Length = 475
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 104/255 (40%), Positives = 145/255 (56%)
Query: 164 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 223
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 224 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 283
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A+ W LFE FF
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFF 118
Query: 284 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSK 342
+ YK+Y+ + SA W G VES++R L +E++ + L H +P F + K
Sbjct: 119 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKEN 177
Query: 343 P----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVA 394
P + +GL K+ E D+ ++ F V + M+I+
Sbjct: 178 PDKEEFRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAM 236
Query: 395 HVTRRNL----PNFV 405
HV R+ L PN V
Sbjct: 237 HVKRKQLHQLLPNHV 251
>UNIPROTKB|G4N5I8 [details] [associations]
symbol:MGG_06121 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR009097 InterPro:IPR011068 Pfam:PF04926 Pfam:PF04928
Pfam:PF03372 GO:GO:0005634 EMBL:CM001233 GO:GO:0006351
GO:GO:0003723 SUPFAM:SSF55144 InterPro:IPR005135 SUPFAM:SSF56219
GO:GO:0004652 GO:GO:0043631 SUPFAM:SSF55003 RefSeq:XP_003711988.1
ProteinModelPortal:G4N5I8 EnsemblFungi:MGG_06121T0 GeneID:2684277
KEGG:mgr:MGG_06121 InterPro:IPR007547 Pfam:PF04457 Uniprot:G4N5I8
Length = 1238
Score = 212 (79.7 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 80/348 (22%), Positives = 149/348 (42%)
Query: 7 LVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP-----EVTELHP 61
++++ +G V +DID LC+GP ++ FF Q + + E+ L
Sbjct: 662 IIMVPVGSWGLGVSTLSSDIDCLCIGPLSSST---FFALTTQRIKKASVESGLEIKLLRR 718
Query: 62 VPDAHVPVMKFKFSGVSIDLLYARLSL----WVIPEDLDISQDSILQNADEQTVRSLNGC 117
V +++ + V +DL Y + W P L + + + QT+ L
Sbjct: 719 VRANSGVMLELEVMSVRVDLQYCAATAVAEQW--PAVLKLPPNDPIFALPAQTLGKLKAL 776
Query: 118 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN-- 175
R D + +P + FR R ++ WA+ RG+YS G+LGGI ++L+AR+C+L
Sbjct: 777 RDLDYLRETIPDLSKFRLAHRAIKTWAQSRGIYSAKFGYLGGIQVSILLARVCKLLARDY 836
Query: 176 ----AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 231
+VP +L S FF Y + W N + L R+ ++ ++ P
Sbjct: 837 GQEVSVPDIL-SSFFSHYASFDWRNKIAFDPFFHKKLNYL-----RSAREPLAILGFFPP 890
Query: 232 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT---------- 281
A +N++ + +++ + E + +E+ NE + WDT F +
Sbjct: 891 A---LNTTLAATVPSMKAIARELSQANELL-----NEDGMTWDTFFGASSAGGDKTHSLA 942
Query: 282 -----FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIER 322
F +YK++++I++ + + GW+ESR L + + R
Sbjct: 943 RGAADFLSSYKSFVKIELQYWGISLSKGSQFIGWLESRCPLLLVDMSR 990
>UNIPROTKB|Q59G05 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma variant"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR007010
InterPro:IPR011068 Pfam:PF04926 GO:GO:0005634 GO:GO:0003723
GO:GO:0004652 GO:GO:0043631 KO:K14376 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 HOVERGEN:HBG053502
RefSeq:NP_075045.2 UniGene:Hs.387471 GeneID:64895 KEGG:hsa:64895
CTD:64895 HGNC:HGNC:14982 GenomeRNAi:64895 NextBio:67037
EMBL:AC011245 EMBL:AC012498 EMBL:AB209304 IPI:IPI00555821
ProteinModelPortal:Q59G05 SMR:Q59G05 STRING:Q59G05 PRIDE:Q59G05
Ensembl:ENST00000412217 ArrayExpress:Q59G05 Bgee:Q59G05
Uniprot:Q59G05
Length = 382
Score = 177 (67.4 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 46/185 (24%), Positives = 92/185 (49%)
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++D W L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 3 VMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 60
Query: 309 VESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGE 364
VES++R L +ER+ + + +P PG+ Y S +F+G+ ++ V E
Sbjct: 61 VESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESV 119
Query: 365 QFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTW 420
D+ ++ F V + + K GM+I HV ++ L +++ P + + +
Sbjct: 120 NIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-PAEILQKKKKQSLS 178
Query: 421 DSRRA 425
D R+
Sbjct: 179 DVNRS 183
Score = 60 (26.2 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 21/83 (25%), Positives = 35/83 (42%)
Query: 494 DANELAG---SNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNS 550
D N +G S R ++++ DS R + N +S K D P +G+ NS
Sbjct: 179 DVNRSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETER--------NS 230
Query: 551 KDAEKLAIEKIMSGPYVADQAFP 573
+ + +EK +S P + P
Sbjct: 231 AEPAAVIVEKPLSVPPAQGLSIP 253
>UNIPROTKB|F1PYB9 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR007010 InterPro:IPR011068
Pfam:PF04926 GO:GO:0005634 GO:GO:0006378 GO:GO:0003723
GO:GO:0004652 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 EMBL:AAEX03007549
Ensembl:ENSCAFT00000004771 Uniprot:F1PYB9
Length = 384
Score = 176 (67.0 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 46/185 (24%), Positives = 92/185 (49%)
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++D W L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 3 VMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 60
Query: 309 VESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGE 364
VES++R L +ER+ + + +P PG+ Y S +F+G+ ++ V E
Sbjct: 61 VESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESV 119
Query: 365 QFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTW 420
D+ ++ F V + + K GM+I HV ++ L +++ P + + +
Sbjct: 120 NIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-PAEILQKKKKQSLS 178
Query: 421 DSRRA 425
D R+
Sbjct: 179 DVSRS 183
>UNIPROTKB|H7C3W0 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007012 Pfam:PF01909 Pfam:PF04928
GO:GO:0006351 GO:GO:0004652 HGNC:HGNC:14982 EMBL:AC011245
EMBL:AC012498 ProteinModelPortal:H7C3W0 Ensembl:ENST00000453839
Bgee:H7C3W0 Uniprot:H7C3W0
Length = 168
Score = 149 (57.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 32/71 (45%), Positives = 40/71 (56%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L + L V DA VPV+KF
Sbjct: 94 GSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKF 152
Query: 73 KFSGVSI-DLL 82
+F G+ + +LL
Sbjct: 153 EFDGIEVVELL 163
>UNIPROTKB|G3V3I9 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007012 Pfam:PF01909 Pfam:PF04928
GO:GO:0006351 GO:GO:0004652 EMBL:AL163051 HGNC:HGNC:14981
ChiTaRS:PAPOLA ProteinModelPortal:G3V3I9 SMR:G3V3I9
Ensembl:ENST00000556619 ArrayExpress:G3V3I9 Bgee:G3V3I9
Uniprot:G3V3I9
Length = 177
Score = 136 (52.9 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 30/64 (46%), Positives = 35/64 (54%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH GADID LCV PRH R DFF + L EV +L V +A VPV+K
Sbjct: 115 GSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKL 173
Query: 73 KFSG 76
F G
Sbjct: 174 CFDG 177
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 655 615 0.00088 120 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 52
No. of states in DFA: 628 (67 KB)
Total size of DFA: 363 KB (2180 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 49.41u 0.12s 49.53t Elapsed: 00:00:03
Total cpu time: 49.42u 0.12s 49.54t Elapsed: 00:00:03
Start: Tue May 21 06:39:26 2013 End: Tue May 21 06:39:29 2013