BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006232
(655 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147795652|emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]
Length = 1097
Score = 942 bits (2435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/630 (72%), Positives = 522/630 (82%), Gaps = 8/630 (1%)
Query: 10 IGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 69
IG + Y+VHGPGADIDTLCVGPRHATREEDFFGELH+ML+EMPEVTELHPVPDAHVPV
Sbjct: 274 IGAWHVYYTVHGPGADIDTLCVGPRHATREEDFFGELHKMLSEMPEVTELHPVPDAHVPV 333
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
M+FKFSGVSIDLLYA+LSLWVIPEDLD+SQDSILQNADEQTVRSLNGCRVTDQILRLVP
Sbjct: 334 MRFKFSGVSIDLLYAKLSLWVIPEDLDVSQDSILQNADEQTVRSLNGCRVTDQILRLVPN 393
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
IQNFRTTLR MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA+PSMLVSRFFRVY
Sbjct: 394 IQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALPSMLVSRFFRVY 453
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
TQWRWPNPV+LCAIEEG+LGLQVWDPR+ PKD++HLMPIITPAYPCMNSSYNVS+STLRI
Sbjct: 454 TQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSSYNVSSSTLRI 513
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 309
M +EF+RG+EI E ME N+A DW TL EP+ FFEAYKNYL+I+I+AENADDLR WKGWV
Sbjct: 514 MSEEFKRGNEISEVMEANKA--DWXTLCEPYPFFEAYKNYLQIEIAAENADDLRKWKGWV 571
Query: 310 ESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIR 369
ESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS+P +C YFMGLQRKQGVP EGEQFDIR
Sbjct: 572 ESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPFHCCYFMGLQRKQGVPASEGEQFDIR 631
Query: 370 LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERK 429
LTV EFK +V MYTL KPGM+I V HV RRN+PNFVFPGGVRPSRP+K + RR LE
Sbjct: 632 LTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGVRPSRPTKVASERRRVLEPN 691
Query: 430 VSSHTK-PGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSINL 488
VS+ GA+D +KRK+ D+NV+T+ RNAKC SSS E +P++ST+++ SI +
Sbjct: 692 VSTQAVLEGAEDSKKRKREDENVETNSRNAKCLVAAASSSHEVLSSNPLVSTVNACSIKV 751
Query: 489 QFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSS 548
+ MD N L + +EKVENN+ ++ NSVEV NG+VDG + K LS +
Sbjct: 752 --DSMDINMLGKTRKEKVENNIEHGLKNLNNSVEVPPQNGEVDGSVRCSHPIKTLSSSGG 809
Query: 549 NSK--DAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAV 606
+ +AEK+AIEKIMSGPYV+ QAFP ELD+LEDD+E KNQ KDF GST+ +S S
Sbjct: 810 SPSSTEAEKIAIEKIMSGPYVSHQAFPGELDELEDDVEYKNQVKDFTGSTKGSSAESSKA 869
Query: 607 NIAAEATLTSMNGGSSSSALSPNGGLGELE 636
N+A E LT+ +G + LSPNGGL ELE
Sbjct: 870 NVAEEP-LTTTSGTVPCTILSPNGGLEELE 898
>gi|359490984|ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 757
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/631 (72%), Positives = 520/631 (82%), Gaps = 8/631 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGPRHATREEDFFGELH+ML+EMPEVTELHPVPDAHVP
Sbjct: 93 IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHKMLSEMPEVTELHPVPDAHVP 152
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VM+FKFSGVSIDLLYA+LSLWVIPEDLD+SQDSILQNADEQTVRSLNGCRVTDQILRLVP
Sbjct: 153 VMRFKFSGVSIDLLYAKLSLWVIPEDLDVSQDSILQNADEQTVRSLNGCRVTDQILRLVP 212
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
IQNFRTTLR MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA+PSMLVSRFFRV
Sbjct: 213 NIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALPSMLVSRFFRV 272
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
YTQWRWPNPV+LCAIEEG+LGLQVWDPR+ PKD++HLMPIITPAYPCMNSSYNVS+STLR
Sbjct: 273 YTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSSYNVSSSTLR 332
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +EF+RG+EI E ME N+A DW TL EP+ FFEAYKNYL+I+I+AENADDLR WKGW
Sbjct: 333 IMSEEFKRGNEISEVMEANKA--DWATLCEPYPFFEAYKNYLQIEIAAENADDLRKWKGW 390
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 368
VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS+P +C YFMGLQRKQGVP EGEQFDI
Sbjct: 391 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPFHCCYFMGLQRKQGVPASEGEQFDI 450
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALER 428
RLTV EFK +V MYTL KPGM+I V HV RRN+PNFVFPGGVRPSRP+K + RR LE
Sbjct: 451 RLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGVRPSRPTKVASERRRVLEP 510
Query: 429 KVSSHTK-PGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSIN 487
VS+ GA+D +KRK+ D+NV+T+ RNAKC SSS E +P++ST+++ SI
Sbjct: 511 NVSTQAVLEGAEDSKKRKREDENVETNSRNAKCLVAAASSSHEVLSSNPLVSTVNACSI- 569
Query: 488 LQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNS 547
+ + MD N L + +EKVENN+ ++ NSVEV NG+VDG + K LS +
Sbjct: 570 -KVDSMDINMLGKTRKEKVENNIEHGLKNLNNSVEVPPQNGEVDGSVRCSHPIKTLSSSG 628
Query: 548 SNSK--DAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCA 605
+ +AEK+AIEKIMSGPYV+ QAFP ELD+LEDD+E KNQ KDF GST+ +S S
Sbjct: 629 GSPSSTEAEKIAIEKIMSGPYVSHQAFPGELDELEDDVEYKNQVKDFTGSTKGSSAESSK 688
Query: 606 VNIAAEATLTSMNGGSSSSALSPNGGLGELE 636
N+A E LT+ +G + LSPNGGL ELE
Sbjct: 689 ANVAEEP-LTTTSGTVPCTILSPNGGLEELE 718
>gi|255567792|ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus communis]
gi|223535837|gb|EEF37498.1| Poly(A) polymerase alpha, putative [Ricinus communis]
Length = 770
Score = 897 bits (2319), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/644 (69%), Positives = 506/644 (78%), Gaps = 32/644 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGPRHATREEDFFGELH+ML+EMPEVTELHPVPDAHVP
Sbjct: 95 IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHRMLSEMPEVTELHPVPDAHVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KFKF GVSIDLLYA+LSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP
Sbjct: 155 VLKFKFKGVSIDLLYAKLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVARICQL+PNA+P+MLVSRFFRV
Sbjct: 215 NIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLFPNALPNMLVSRFFRV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
YTQWRWPNPV+LCAIEEGSLGLQVWDPRRNPKD+YHLMPIITPAYP MNSSYNVS STLR
Sbjct: 275 YTQWRWPNPVMLCAIEEGSLGLQVWDPRRNPKDRYHLMPIITPAYPSMNSSYNVSASTLR 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +EFQRG+EICEAME ++A DW+TLFE F+FF+AYKNYL+IDI AEN DDLR WKGW
Sbjct: 335 IMSEEFQRGNEICEAMEASKA--DWNTLFESFSFFDAYKNYLQIDIGAENEDDLRKWKGW 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 368
VESRLRQLTLKIERHT+NMLQCHPHPG+F+DKS+PL+CSYFMGLQRKQGVP EGEQFDI
Sbjct: 393 VESRLRQLTLKIERHTFNMLQCHPHPGEFTDKSRPLHCSYFMGLQRKQGVPANEGEQFDI 452
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALER 428
R+TV+EFK +V+MYT KPGM+I V HV RRN+P+FVFPGG+RPSRPSK TWDS+R+
Sbjct: 453 RITVEEFKISVNMYTSWKPGMEIHVTHVKRRNIPSFVFPGGIRPSRPSKTTWDSKRSSAE 512
Query: 429 KV--SSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSI 486
K G+DD KRK+ DDNV + AK +T P SGE GSP T+S
Sbjct: 513 KSGEGKGVSDGSDDKGKRKRIDDNVANATKIAKPDSTSP-LSGEVNNGSPSAGTVS---- 567
Query: 487 NLQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKG-LSF 545
N + E VENNLTD S++ +HNG+++ P NK L
Sbjct: 568 ---LLLTSTNAVGEPRDEPVENNLTDDFSNSKDLTGFYAHNGELNPP------NKVLLGI 618
Query: 546 NSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAKDF-AGS----TQNNS 600
N + SK AEKLAIE IMSGPYV +QA P ELD+LEDD E + Q KDF AG+ T ++
Sbjct: 619 NEAPSKVAEKLAIETIMSGPYVTNQALPQELDELEDDFECRTQVKDFGAGANTKDTNDSP 678
Query: 601 LGSCAVNIAAE--------ATLTSMNGGSSSSALSPNGGLGELE 636
+ S + + A+ A + S NG S+AL PNGGL ELE
Sbjct: 679 IESSSASTTAKTLPNAPVAAPVISSNGTDPSTALCPNGGLEELE 722
>gi|449439435|ref|XP_004137491.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
gi|449521033|ref|XP_004167536.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 748
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/642 (66%), Positives = 488/642 (76%), Gaps = 36/642 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGPRHATREEDFFGELH+ML+EMPEV+ELHPVPDAHVP
Sbjct: 93 IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHKMLSEMPEVSELHPVPDAHVP 152
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VM+FK SGVSIDLLYA+LSLWVIPEDLDISQDSILQN DEQTVRSLNGCRVTD+ILRLVP
Sbjct: 153 VMRFKLSGVSIDLLYAKLSLWVIPEDLDISQDSILQNTDEQTVRSLNGCRVTDRILRLVP 212
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
IQ+FRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVARICQLYPNA+P+MLVSRFFRV
Sbjct: 213 NIQSFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLYPNALPNMLVSRFFRV 272
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+TQWRWPNPV+LCA EEGSLGLQVWDPRRNPKD+YHLMPIITPAYPCMNSSYNVS STLR
Sbjct: 273 FTQWRWPNPVMLCANEEGSLGLQVWDPRRNPKDRYHLMPIITPAYPCMNSSYNVSASTLR 332
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +EF+RGH+ICE ME+N++ DWDTLFEP+ FFEAYKNYL+IDI+AEN DD+R WKGW
Sbjct: 333 IMTEEFRRGHDICEVMEENKS--DWDTLFEPYPFFEAYKNYLQIDITAENDDDIRIWKGW 390
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 368
VESRLRQLTLKIERHTYNMLQCHP+PGDFSDKS+P + YFMGLQRKQG P GEQFDI
Sbjct: 391 VESRLRQLTLKIERHTYNMLQCHPYPGDFSDKSRPFHHCYFMGLQRKQGGPASGGEQFDI 450
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALER 428
RLTV EFK +V++YT RK GM+I V+HV RR++PNFVFPGGVRPSR SK TWD RR+ E
Sbjct: 451 RLTVDEFKHSVNVYTQRKRGMEIYVSHVKRRSIPNFVFPGGVRPSRASKLTWDIRRSSEL 510
Query: 429 KVSSHTKPGA----------DDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIM 478
K S T+ + DD RKR + DDN +T+LRN +C A S E E S +
Sbjct: 511 KASDSTQVDSPSEATESLDGDDRRKRIRIDDNANTNLRNGECLAMAHSHPEEVHEVSQVS 570
Query: 479 STISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDP 538
+T S S ++ F AN L NL D VSS N G + P
Sbjct: 571 NTSSCSIKDVNFIPTSANNL---------ENLAD----------VSSQNNGDHGSLRVSP 611
Query: 539 RNKGLS---FNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAKDFAGS 595
+S ++SN K+AEKLAI+KI+S Y + Q FP E ++LE D + NQAKDF +
Sbjct: 612 STNNVSDAAADTSNCKEAEKLAIQKILSDSYDSHQDFPCETEELE-DFDYNNQAKDFGAT 670
Query: 596 TQNNSLGSCAVNIAAEATLT-SMNGGSSSSALSPNGGLGELE 636
Q + + S N + T S N SS+ NGGL ELE
Sbjct: 671 KQGSPMMSSVANTSPLVLPTVSCNEARQSSSSYYNGGLEELE 712
>gi|357521515|ref|XP_003631046.1| Poly(A) polymerase [Medicago truncatula]
gi|355525068|gb|AET05522.1| Poly(A) polymerase [Medicago truncatula]
Length = 822
Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/673 (61%), Positives = 496/673 (73%), Gaps = 52/673 (7%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
++ G + VHGPGADID LCVGPRHATR+EDFFGELH+ML+EMPEVTELHPVPDAHV
Sbjct: 93 MIFTFGSYRLGVHGPGADIDVLCVGPRHATRKEDFFGELHKMLSEMPEVTELHPVPDAHV 152
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVM FKF+GVS+DLLYA+LSLWVIPEDLD+SQ++ILQ DEQTVRSLNGCRVTDQIL LV
Sbjct: 153 PVMGFKFNGVSLDLLYAQLSLWVIPEDLDLSQEAILQYTDEQTVRSLNGCRVTDQILHLV 212
Query: 128 P-----------------------------KIQNFRTTLRCMRFWAKRRGVYSNVAGFLG 158
P ++QNFRTTLRC++ WAK RGVYSNVAGFLG
Sbjct: 213 PNIQVDKYRTFTFSFDMTSGFHVIDYISISQVQNFRTTLRCVKLWAKCRGVYSNVAGFLG 272
Query: 159 GINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRN 218
GINWALLV RICQLYPNA+P+MLVSRFFRVYTQWRWPNPV+LC I+EGSLGLQVWDPRRN
Sbjct: 273 GINWALLVGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCTIKEGSLGLQVWDPRRN 332
Query: 219 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 278
PKDKYHLMPIITPAYPCMNSSYNVS STLR+M +EFQRG EICEAME N+A DWDTLFE
Sbjct: 333 PKDKYHLMPIITPAYPCMNSSYNVSLSTLRVMTEEFQRGDEICEAMEANKA--DWDTLFE 390
Query: 279 PFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 338
P+ FFE+YKNYLRIDISAEN DDLRNWKGWV+SRLRQLTLKIER+TY MLQCHPHPGDFS
Sbjct: 391 PYPFFESYKNYLRIDISAENVDDLRNWKGWVKSRLRQLTLKIERNTYGMLQCHPHPGDFS 450
Query: 339 DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTR 398
DKS+PL+CSYFMGLQRKQGVP EG QFD+RLTV+EFK +V+ YT KPGM IS++HV R
Sbjct: 451 DKSRPLHCSYFMGLQRKQGVPANEGGQFDMRLTVEEFKHSVNAYTQWKPGMNISISHVKR 510
Query: 399 RNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKP---------GADDGRKRKQTDD 449
RN+P FVFPGGVRP PSK TW S+R E +VS H + GA++ RKRKQ +D
Sbjct: 511 RNIPAFVFPGGVRPKCPSKVTWVSKRRSELRVSGHGQAEKSQVGKELGANNDRKRKQAED 570
Query: 450 NVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENN 509
+ D LRN++ +++P SS + E +S +S S+ + + + N ++ EK + N
Sbjct: 571 SGD-DLRNSRSFSSLPPSSRDVHEDGNPVSIANSCSV--KCDDTELNCMSEQKSEKPDLN 627
Query: 510 LTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVAD 569
+ G R + N ++ P++ + + SN ++AEK+ I+KI+ GP
Sbjct: 628 FSGECPGDRETDGSVKSNSQII-PLLA-------ATDRSNFEEAEKVVIQKIVCGPCEVH 679
Query: 570 QAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSALSPN 629
QAFP E D+LEDDLE +N+ KDF G+ N + S +AAE S SSS+ + N
Sbjct: 680 QAFPEEPDELEDDLEYRNKVKDFGGNLANINFDSTKSVVAAEPVF-SQKENSSSTHIYSN 738
Query: 630 GGLGELEVLSANL 642
GGL ELE L L
Sbjct: 739 GGLEELECLWGAL 751
>gi|356531174|ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/649 (64%), Positives = 498/649 (76%), Gaps = 25/649 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGPRHA+R+EDFFGEL +ML+EM EVTELHPVPDAHVP
Sbjct: 93 IFTFGSYRLGVHGPGADIDTLCVGPRHASRDEDFFGELQKMLSEMQEVTELHPVPDAHVP 152
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VMKFKF+GVS+DLLYARL+LWVIP+DLDISQ+SILQN DEQTV SLNGCRVTDQ+LRLVP
Sbjct: 153 VMKFKFNGVSVDLLYARLALWVIPDDLDISQESILQNVDEQTVLSLNGCRVTDQVLRLVP 212
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
IQ FRTTLRCMRFWAKRRGVYSNVAGFLGGIN ALLVARICQLYPNA+P+MLVSRFFRV
Sbjct: 213 NIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGINLALLVARICQLYPNALPNMLVSRFFRV 272
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
YTQWRWPNPV+LCAIEEGSLGL VWDPRRNPKD+YHLMPIITPAYPCMNS+YNV++STLR
Sbjct: 273 YTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLMPIITPAYPCMNSTYNVTSSTLR 332
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M DEF+RG EICEAME ++A DWDTLFEP+ FFE+YKNYL+IDI+AENADDLR WKGW
Sbjct: 333 VMSDEFRRGSEICEAMEASKA--DWDTLFEPYPFFESYKNYLQIDITAENADDLRQWKGW 390
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 368
VESRLRQLTLKIERHTY MLQCHPHPG+FSD S+P + YFMGLQRKQGVPV EGEQFDI
Sbjct: 391 VESRLRQLTLKIERHTYGMLQCHPHPGEFSDNSRPFHHCYFMGLQRKQGVPVNEGEQFDI 450
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALER 428
RLTV+EFK +V+ YTL KPGM I V+HV RRN+PN++FPGGVRP+ PSK T +++++ +
Sbjct: 451 RLTVEEFKHSVNAYTLWKPGMNIHVSHVKRRNIPNYIFPGGVRPTFPSKVTAENKQSSKS 510
Query: 429 KVSSH---TKP--------GADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPI 477
+V H KP GADD RKRK+++D +D + RN+K ++ S E E I
Sbjct: 511 RVPGHGQAEKPQGGKTVVVGADDVRKRKRSEDIMDNNPRNSKSPVSLAPPSREVNED--I 568
Query: 478 MSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGD 537
+SSS +++F+ + N + G EK N I + S N + P++
Sbjct: 569 SPISASSSCSMKFDESEVNSIGGQKSEKPCLNSPGEIPSGDSGTNGSVTNNQQVNPVLA- 627
Query: 538 PRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAKDFAGSTQ 597
+ ++SNSK+ EKLAIEKIMSGPY A QAFP E ++LEDD + KNQ KD G+ +
Sbjct: 628 ------AADTSNSKEEEKLAIEKIMSGPYDAHQAFPEEPEELEDDTQYKNQDKDSGGNMK 681
Query: 598 NNSLGSCAVNIAAEATLTSMNGGSSSSALSPNGGLGELEV--LSANLIT 644
NN + AE + S S+ S N L ELE LSA L++
Sbjct: 682 NNMESLLSKPAVAEEPVISKEITCSTHLFS-NEILEELEPAELSAPLLS 729
>gi|356522834|ref|XP_003530048.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/598 (66%), Positives = 472/598 (78%), Gaps = 22/598 (3%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VHGPGADIDTLCVGPRHA+R+EDFFG L +ML+EM EVTELHPVPDAHVPV+KF
Sbjct: 97 GSYRLGVHGPGADIDTLCVGPRHASRDEDFFGGLQKMLSEMQEVTELHPVPDAHVPVVKF 156
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
KF+GVS+DLLYARL+LWVIPEDLDISQ+SILQ+ DEQTV SLNGCRVTDQ+LRLVP IQ
Sbjct: 157 KFNGVSVDLLYARLALWVIPEDLDISQESILQSVDEQTVLSLNGCRVTDQVLRLVPNIQT 216
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FRTTLRCMRFWAKRRGVYSNVAGFLGGIN ALLVARICQLYPNA+P MLVSRFFRVYTQW
Sbjct: 217 FRTTLRCMRFWAKRRGVYSNVAGFLGGINLALLVARICQLYPNALPDMLVSRFFRVYTQW 276
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
RWPNPV+LCAIEEGSLGL VWDPRRNPKD+YHLMPIITP YPCMNS+YNV++STLR+M D
Sbjct: 277 RWPNPVMLCAIEEGSLGLPVWDPRRNPKDRYHLMPIITPVYPCMNSTYNVTSSTLRVMSD 336
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF+RG EICEAME ++A DWDTLFEP+ FFE+YKNYL+IDI+AENADDLR WKGWV SR
Sbjct: 337 EFRRGSEICEAMEASKA--DWDTLFEPYPFFESYKNYLQIDITAENADDLRQWKGWVGSR 394
Query: 313 LRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTV 372
LRQLTLKIERHTY MLQCHPHPG+FSD S+P + YFMGLQRKQGVPV EGEQFDIRLTV
Sbjct: 395 LRQLTLKIERHTYGMLQCHPHPGEFSDNSRPFHHCYFMGLQRKQGVPVNEGEQFDIRLTV 454
Query: 373 KEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSS 432
+EFK +V+ YTL KPGM I V+HV R N+PN++FPGGVRP+ PSK T +++++ + + S
Sbjct: 455 EEFKHSVNAYTLWKPGMDIHVSHVKRSNIPNYIFPGGVRPTFPSKVTAENKQSSKSRASG 514
Query: 433 H---TKP--------GADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTI 481
H KP GADD RKRK+++DN+D + RN++ ++P S E E I
Sbjct: 515 HGQTEKPQGGKAVAVGADDVRKRKRSEDNMDNNPRNSRSPVSLPPPSREVHED--ISPIS 572
Query: 482 SSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNK 541
+SSS +++F+ + N + G EK+ I + S + + P++
Sbjct: 573 ASSSCSMKFDESEVNSIGGQKSEKLCLKSPGEIPSGDSGTNGSVTSNQQVNPVLA----- 627
Query: 542 GLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAKDFAGSTQNN 599
+ ++SNSK+ EKLAIEKIMSG Y A QAF E +LED+ + KNQ KD + + +NN
Sbjct: 628 --AADTSNSKEEEKLAIEKIMSGLYDAHQAFQEEPKELEDNTQYKNQDKDSSANMKNN 683
>gi|357500153|ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula]
gi|355495380|gb|AES76583.1| Poly(A) polymerase [Medicago truncatula]
Length = 752
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/655 (61%), Positives = 489/655 (74%), Gaps = 34/655 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGPRHATR+EDFFGEL +ML+EM EVTELHPVPDAHVP
Sbjct: 93 IFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELQKMLSEMEEVTELHPVPDAHVP 152
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VMKFKF+GVS+DLLYARL+LWVIPEDLDISQ+SILQN DEQTV SLNGCRVTDQ+LRLVP
Sbjct: 153 VMKFKFNGVSVDLLYARLALWVIPEDLDISQESILQNVDEQTVLSLNGCRVTDQVLRLVP 212
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
IQNFRTTLR MRFWAKRRGVYSNVAGFLGGIN ALLV RICQLYPNA+P+MLVSRFFRV
Sbjct: 213 NIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINLALLVGRICQLYPNALPNMLVSRFFRV 272
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
YTQWRWPNPV+LCAIEEGSLGL VWDPRRNP+D+YHLMPIITPAYPCMNS+YNV+TSTLR
Sbjct: 273 YTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPRDRYHLMPIITPAYPCMNSTYNVTTSTLR 332
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM DEF+RG EICEAME ++A DWDTLFEP+ FFEAYKNYL+IDI+AEN DDLR WKGW
Sbjct: 333 IMSDEFKRGTEICEAMEASKA--DWDTLFEPYPFFEAYKNYLQIDITAENPDDLRQWKGW 390
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 368
VESRLRQLTLKIE++TY MLQCHP+PG+FSDKS+ + YFMGLQRKQGVPV EGEQFDI
Sbjct: 391 VESRLRQLTLKIEKYTYGMLQCHPYPGEFSDKSRSFHQCYFMGLQRKQGVPVSEGEQFDI 450
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALER 428
R TV+EFK V+ YT KPGM I V+HV RRN+PNF+FPGGVRPS PS+ ++RR+ +
Sbjct: 451 RQTVEEFKHNVNAYTAWKPGMDIRVSHVKRRNIPNFIFPGGVRPSVPSRVNGENRRSSKS 510
Query: 429 KVSSHTKP-----------GADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPI 477
+V+ ++ GADD RKRK+ +DN ++ + + + P+ + + +P
Sbjct: 511 RVAGQSQSEKSQGGKAVVLGADDERKRKRLEDNNNSRVSKSSASVSPPNRNVP-EDRNPF 569
Query: 478 MSTISSSSINLQFEHMDANELAGSNREKVENNLTDSI-RGSRNSVEVSSHNGKVDGPMIG 536
+T SS +++F+ + N + EK+ I G + ++ N ++D P
Sbjct: 570 SAT---SSCSMKFDDSEVNSMGDQKSEKLCLKSVGEIPAGDSVTNGSATDNKQLDAP--- 623
Query: 537 DPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAKDFAGST 596
++SN+K+ E+LAIE IM+GPY A QA E D+LE D+ +NQ D GS
Sbjct: 624 ---------DTSNTKEEERLAIEHIMAGPYEAHQALTEEPDELEQDMGYRNQVNDNGGSV 674
Query: 597 QNNSLGSCAVN-IAAEATLTSMNGGSSSSALSPNGGLGELE--VLSANLITSIGA 648
++N+ S N + E + S S+ + NGGL ELE L+A L I A
Sbjct: 675 KSNNFDSSNPNPVVVEDQVISKETVCSTHSFC-NGGLEELEPAELTAPLFCGIPA 728
>gi|224135441|ref|XP_002322074.1| predicted protein [Populus trichocarpa]
gi|222869070|gb|EEF06201.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/429 (83%), Positives = 396/429 (92%), Gaps = 5/429 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGPRHATREEDFFGELH+ML+EMPEVTELHPVPDAHVP
Sbjct: 84 IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHRMLSEMPEVTELHPVPDAHVP 143
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VM+FKF GVSIDLLYA+LSLWVIPEDLD+SQDS+L NADEQTVRSLNGCRVTDQILRLVP
Sbjct: 144 VMRFKFKGVSIDLLYAKLSLWVIPEDLDVSQDSMLHNADEQTVRSLNGCRVTDQILRLVP 203
Query: 129 KIQ---NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRF 185
IQ NFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVARICQL+PNA+P+MLVSRF
Sbjct: 204 NIQAMQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLFPNALPNMLVSRF 263
Query: 186 FRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
FRVYTQWRWPNPV+LCAIEEGSLGL VWDPRRNPKD+YHLMPIITPAYP MNSSYNVS+S
Sbjct: 264 FRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLMPIITPAYPSMNSSYNVSSS 323
Query: 246 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNW 305
TLRIM +EFQRG+EICEAME ++A+ WDTLFEPF+FFEAYKNYL+IDISAEN DDLR W
Sbjct: 324 TLRIMTEEFQRGNEICEAMEVSKAE--WDTLFEPFSFFEAYKNYLQIDISAENEDDLRQW 381
Query: 306 KGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQ 365
KGWVESRLRQLTLKIERHTYNMLQCHPHPG+FSDKS+PL+CSYFMGLQRKQGVPV EGEQ
Sbjct: 382 KGWVESRLRQLTLKIERHTYNMLQCHPHPGEFSDKSRPLHCSYFMGLQRKQGVPVNEGEQ 441
Query: 366 FDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRA 425
FDIR+TV EFK +V+MYTL KPGM+I V HV +RN+PNFVFP GVRPSRPSK TWD RR+
Sbjct: 442 FDIRITVDEFKNSVNMYTLWKPGMEIRVTHVKKRNIPNFVFPSGVRPSRPSKATWDGRRS 501
Query: 426 LERKVSSHT 434
E KV++++
Sbjct: 502 SEAKVANNS 510
>gi|297850192|ref|XP_002892977.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297338819|gb|EFH69236.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 716
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/651 (61%), Positives = 462/651 (70%), Gaps = 76/651 (11%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGPRHATRE DFFGEL +ML+EMPEVTELHPVPDAHVP
Sbjct: 88 IFTFGSYRLGVHGPGADIDTLCVGPRHATREGDFFGELQRMLSEMPEVTELHPVPDAHVP 147
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+M FK +GVSIDLLYA+L LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP
Sbjct: 148 LMGFKLNGVSIDLLYAQLPLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 207
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVARICQLYPNA+P+ML SRFFRV
Sbjct: 208 NIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLYPNALPNMLASRFFRV 267
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y QWRWPNPVLLC+++EGS GLQVWDPRRNPKD+ H+MPIITPAYPCMNSSYNVS STLR
Sbjct: 268 YNQWRWPNPVLLCSMDEGSFGLQVWDPRRNPKDRLHIMPIITPAYPCMNSSYNVSASTLR 327
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM EFQRG EICEAME N+A DWDTLFEPF FFEAYKNYL+IDISA N +DLR WKGW
Sbjct: 328 IMTGEFQRGKEICEAMEANKA--DWDTLFEPFAFFEAYKNYLQIDISAANVNDLRKWKGW 385
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 368
VESRLRQLTLKIERHTY+MLQCHPHP DF D S+PL+CSYFMGLQRKQGVP EGEQFDI
Sbjct: 386 VESRLRQLTLKIERHTYDMLQCHPHPHDFQDASRPLHCSYFMGLQRKQGVPAAEGEQFDI 445
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALER 428
R TV+EFK V+ YTL PGM+ISV+H+ RR+LPN+VFPGGVRPS SKGTWDS R E
Sbjct: 446 RRTVEEFKHTVNAYTLWIPGMEISVSHIKRRSLPNYVFPGGVRPSHTSKGTWDSNRRSEH 505
Query: 429 K----------------VSSHTKPGAD---DGRKRKQTDDNVDT-HLRNAKCHA-TMPSS 467
+ +SS +K G++ DG+KRK D+ T LR +K A ++P
Sbjct: 506 RNSSTSSALAAATTTTEMSSESKAGSNSPVDGKKRKWGDNETLTDQLRKSKHIAVSVPVE 565
Query: 468 SGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHN 527
+ E +P + +I SS + + N
Sbjct: 566 NCEGGSPNPSVGSICSSPM-----------------------------------KDYCTN 590
Query: 528 GKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKN 587
GK + P+ DP ++F + + AE L IEKI + QA E ++LE+ + N
Sbjct: 591 GKSE-PISKDPPENVVAF---SKEPAESLPIEKIAT-----PQAPSQETEELEESFDFGN 641
Query: 588 QAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSALSPNGGLGELEVL 638
Q + + + A AT+ S+ SA PN + ELEVL
Sbjct: 642 QVVE--------QISHKVAILTATATIPPFEATSNGSAF-PNEAVEELEVL 683
>gi|297734259|emb|CBI15506.3| unnamed protein product [Vitis vinifera]
Length = 651
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/401 (85%), Positives = 370/401 (92%), Gaps = 2/401 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGPRHATREEDFFGELH+ML+EMPEVTELHPVPDAHVP
Sbjct: 93 IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHKMLSEMPEVTELHPVPDAHVP 152
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VM+FKFSGVSIDLLYA+LSLWVIPEDLD+SQDSILQNADEQTVRSLNGCRVTDQILRLVP
Sbjct: 153 VMRFKFSGVSIDLLYAKLSLWVIPEDLDVSQDSILQNADEQTVRSLNGCRVTDQILRLVP 212
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
IQNFRTTLR MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA+PSMLVSRFFRV
Sbjct: 213 NIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALPSMLVSRFFRV 272
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
YTQWRWPNPV+LCAIEEG+LGLQVWDPR+ PKD++HLMPIITPAYPCMNSSYNVS+STLR
Sbjct: 273 YTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSSYNVSSSTLR 332
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +EF+RG+EI E ME N+A DW TL EP+ FFEAYKNYL+I+I+AENADDLR WKGW
Sbjct: 333 IMSEEFKRGNEISEVMEANKA--DWATLCEPYPFFEAYKNYLQIEIAAENADDLRKWKGW 390
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 368
VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS+P +C YFMGLQRKQGVP EGEQFDI
Sbjct: 391 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPFHCCYFMGLQRKQGVPASEGEQFDI 450
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGG 409
RLTV EFK +V MYTL KPGM+I V HV RRN+PNFVFPGG
Sbjct: 451 RLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPGG 491
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Query: 552 DAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAE 611
+AEK+AIEKIMSGPYV+ QAFP ELD+LEDD+E KNQ KDF GST+ +S S N+A E
Sbjct: 529 EAEKIAIEKIMSGPYVSHQAFPGELDELEDDVEYKNQVKDFTGSTKGSSAESSKANVAEE 588
Query: 612 ATLTSMNGGSSSSALSPNGGLGELE 636
LT+ +G + LSPNGGL ELE
Sbjct: 589 P-LTTTSGTVPCTILSPNGGLEELE 612
>gi|42562141|ref|NP_173240.2| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|9665075|gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis
thaliana gb|AF255297 and contains a
Nucleotidyltransferase PF|01909 domain. ESTs
gb|AV536592, gb|AV553256, gb|AV561630, gb|AV532289 come
from this gene [Arabidopsis thaliana]
gi|29029092|gb|AAO64925.1| At1g17980 [Arabidopsis thaliana]
gi|32527642|gb|AAP86214.1| poly(A) polymerase [Arabidopsis thaliana]
gi|110743114|dbj|BAE99449.1| hypothetical protein [Arabidopsis thaliana]
gi|332191538|gb|AEE29659.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 713
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/652 (60%), Positives = 454/652 (69%), Gaps = 81/652 (12%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGPRHATRE DFFGEL +ML+EMPEVTELHPVPDAHVP
Sbjct: 88 IFTFGSYRLGVHGPGADIDTLCVGPRHATREGDFFGELQRMLSEMPEVTELHPVPDAHVP 147
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+M FK +GVSIDLLYA+L LWVIPEDLD+SQDSILQNADEQTVRSLNGCRVTDQILRLVP
Sbjct: 148 LMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNADEQTVRSLNGCRVTDQILRLVP 207
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVARICQLYPNA+P++LVSRFFRV
Sbjct: 208 NIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLYPNALPNILVSRFFRV 267
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+ QW WPN + LC+ +EGSLGLQVWDPR NPKD+ H+MPIITPAYPCMNSSYNVS STLR
Sbjct: 268 FYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPIITPAYPCMNSSYNVSESTLR 327
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM EFQRG+EICEAME N+A DWDTLFEPF FFEAYKNYL+IDISA N DDLR WKGW
Sbjct: 328 IMKGEFQRGNEICEAMESNKA--DWDTLFEPFAFFEAYKNYLQIDISAANVDDLRKWKGW 385
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 368
VESRLRQLTLKIERH + ML CHPHP DF D S+PL+CSYFMGLQRKQGVP EGEQFDI
Sbjct: 386 VESRLRQLTLKIERH-FKMLHCHPHPHDFQDTSRPLHCSYFMGLQRKQGVPAAEGEQFDI 444
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALER 428
R TV+EFK V+ YTL PGM+ISV H+ RR+LPNFVFPGGVRPS SKGTWDS R E
Sbjct: 445 RRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFPGGVRPSHTSKGTWDSNRRSEH 504
Query: 429 K----------------VSSHTKPGAD---DGRKRKQTDDNVDT-HLRNAKCHA-TMPSS 467
+ +SS +K G++ DG+KRK D T RN+K A ++P
Sbjct: 505 RNSSTSSAPAATTTTTEMSSESKAGSNSPVDGKKRKWGDSETLTDQPRNSKHIAVSVPVE 564
Query: 468 SGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHN 527
+ E +P + +I SS + + N
Sbjct: 565 NCEGGSPNPSVGSICSSPM-----------------------------------KDYCTN 589
Query: 528 GKVDGPMIGDPRNKGLSFNSSNSKD-AEKLAIEKIMSGPYVADQAFPLELDQLEDDLELK 586
GK + P+ DP ++F SKD E L IEKI + QA E ++LE+ +
Sbjct: 590 GKSE-PISKDPPENVVAF----SKDPPESLPIEKIAT-----PQAH--ETEELEESFDFG 637
Query: 587 NQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSALSPNGGLGELEVL 638
NQ + + ++A AT+ S+ S P + ELEVL
Sbjct: 638 NQVIE--------QISHKVAVLSATATIPPFEATSNGSPF-PYEAVEELEVL 680
>gi|356511273|ref|XP_003524351.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Glycine
max]
Length = 702
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/593 (60%), Positives = 439/593 (74%), Gaps = 24/593 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G VH PGA+IDTLCVGPRHA+R+EDFFG+LH+ML++MPEVTELHPVPDAHVP
Sbjct: 92 IFTFGSYXLGVHSPGANIDTLCVGPRHASRDEDFFGDLHRMLSKMPEVTELHPVPDAHVP 151
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VM+FKF+GV IDLLYA+LSL VIPEDLDISQ+ ILQNADE+TV SLNGCRVTD++L
Sbjct: 152 VMRFKFNGVYIDLLYAKLSLRVIPEDLDISQELILQNADEETVCSLNGCRVTDKVL---- 207
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSN--VAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 186
+QNF TTLRCM+FWAK GVY V +LGGINWALLVAR C L+PNA+P+MLVSRFF
Sbjct: 208 -LQNFCTTLRCMKFWAKHCGVYXKNFVTSYLGGINWALLVARTCXLFPNALPNMLVSRFF 266
Query: 187 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
RVYTQW WPNPV+LCAIEEGS+GLQ+WDPRR P D++HLMPIITPAY CMNSSYNVS+ T
Sbjct: 267 RVYTQWCWPNPVMLCAIEEGSVGLQIWDPRRYPNDRFHLMPIITPAYACMNSSYNVSSIT 326
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
L IM +EFQRG+EICE ++ D+ W + F +YKNYL+IDIS ENADDLR WK
Sbjct: 327 LCIMTEEFQRGNEICEYFAQD--DLTWAFKLK-FPCSNSYKNYLQIDISGENADDLRKWK 383
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQF 366
GWVES LRQL L+IERH Y MLQCHPHPGD SDKS+P +CS FM LQRKQGVPV +G QF
Sbjct: 384 GWVESHLRQLRLQIERHIYGMLQCHPHPGDSSDKSRPFHCSNFMALQRKQGVPVNDGGQF 443
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 426
DIRLTV+EFK +V++YTL PGM + V HV RN+P FVFPG VRPS PSK TW+ +++
Sbjct: 444 DIRLTVEEFKHSVNIYTLWIPGMDVHVPHVKHRNIPTFVFPGSVRPSHPSKVTWEIKKSQ 503
Query: 427 ERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSI 486
E K++ GA+D RKRKQ +D+VD+ LRN+K A++P SS E E +S SS +
Sbjct: 504 EGKMAVL---GANDDRKRKQAEDSVDS-LRNSKSMASLPPSSREVHEDENPISPASSCFV 559
Query: 487 NLQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFN 546
+ + N + EK + + G R + + N +V+ + +
Sbjct: 560 --KSNDSEINSTSEQQSEKPDLKSSGECPGDRETNGSVTSNLQVNAALTAT--------D 609
Query: 547 SSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAKDFAGSTQNN 599
+S+SK+AEKLAIEKIM GPY A Q F E D+LEDDLE +NQ KDF G +N+
Sbjct: 610 TSSSKEAEKLAIEKIMCGPYDAQQVFSGEPDELEDDLEFRNQVKDFGGKMKNS 662
>gi|148910690|gb|ABR18412.1| unknown [Picea sitchensis]
Length = 712
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/575 (61%), Positives = 420/575 (73%), Gaps = 48/575 (8%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGPRHATREEDFF EL++ML +MPEVTELHPVPDAHVP
Sbjct: 93 IFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFIELYEMLADMPEVTELHPVPDAHVP 152
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VMKFKF+G+SIDLLYA+LSLWVIPEDLDISQDSIL+NADEQTVRSLNGCRVTDQILRLVP
Sbjct: 153 VMKFKFNGISIDLLYAKLSLWVIPEDLDISQDSILRNADEQTVRSLNGCRVTDQILRLVP 212
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
IQNFRTTLRCM+ WAKRRGVYSNVAGFLGG+NWALLVARICQLYPNA+PSMLV RFFRV
Sbjct: 213 NIQNFRTTLRCMKLWAKRRGVYSNVAGFLGGVNWALLVARICQLYPNALPSMLVCRFFRV 272
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
YTQWRWPNPV+LCAIEEG LGL VWDPR+NP+D+ H MPIITPAYPCMNSSYNVS+STLR
Sbjct: 273 YTQWRWPNPVMLCAIEEGPLGLPVWDPRKNPRDRLHQMPIITPAYPCMNSSYNVSSSTLR 332
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M +EFQR ++ICE +E N+ V W+ LFE + FFEAYKNYL IDISAE ADDLR WKGW
Sbjct: 333 VMTEEFQRSNQICEELELNK--VCWNILFETYPFFEAYKNYLEIDISAEGADDLRKWKGW 390
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 368
ESRLR LTLKIER T+ MLQCHPHP DFSD +P +C +FMGLQRKQG+P+ EGEQFDI
Sbjct: 391 TESRLRLLTLKIERQTFGMLQCHPHPDDFSDPQRPYHCCFFMGLQRKQGMPIQEGEQFDI 450
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALER 428
R+TV EF+ +V MYTL K GM+I+V+H+ RRN+P FVFPGGVRP R +K
Sbjct: 451 RVTVDEFRHSVKMYTLWKQGMEINVSHIRRRNIPLFVFPGGVRPPRTTK----------- 499
Query: 429 KVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSINL 488
+ + +P A +PS+ G P++S + S L
Sbjct: 500 MLGTAGRPNA-------------------------VPST------GVPVLSHTAKSDTGL 528
Query: 489 QFEHMD--ANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFN 546
+ +D + E+ + K + + + R SV ++ K G + ++
Sbjct: 529 PDDELDGVSGEVTSMVKRKRDRANEELVASKRPSVLPLANGTKTSNSERGIAPAEPIAIQ 588
Query: 547 SSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLED 581
+S + AE++AI KI SG + ELD+L++
Sbjct: 589 ASQT--AEEVAITKITSGQGDGFGSPVEELDELDE 621
>gi|297737752|emb|CBI26953.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/632 (59%), Positives = 431/632 (68%), Gaps = 50/632 (7%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGPRHATR+EDFFGELH+ML E PEV ELHPVPDAHVP
Sbjct: 92 IFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELHRMLAETPEVQELHPVPDAHVP 151
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VMKFKF+GVSIDLLYARLSLWVIPEDLDISQ++ILQN DEQTVRSLNGCRVTDQILRLVP
Sbjct: 152 VMKFKFNGVSIDLLYARLSLWVIPEDLDISQETILQNVDEQTVRSLNGCRVTDQILRLVP 211
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVARICQLYPNAVPS LVSRFFRV
Sbjct: 212 NIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLYPNAVPSTLVSRFFRV 271
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
YTQWRWPNPV+LC IEE LGL VWDPRRN KD+ HLMPIITPAYP MNSSYNVS STLR
Sbjct: 272 YTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIKDRNHLMPIITPAYPSMNSSYNVSWSTLR 331
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +E QRG+EI + ME + W TLFEPF FFEAYKNYL+IDI+AEN DLRNWKGW
Sbjct: 332 IMEEELQRGNEIVKEMETE--NTGWITLFEPFLFFEAYKNYLQIDITAENDVDLRNWKGW 389
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 368
VESRLR LT KIER T MLQCHPHP +FSD S+ + YFMGL+RK+G EGEQFDI
Sbjct: 390 VESRLRLLTRKIERDTGGMLQCHPHPAEFSDTSRSFHYCYFMGLRRKEGSAAQEGEQFDI 449
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALER 428
RLTV +FK V MY+ K GM I V H+ R+N+PNFVFPGGVRP +P K + +
Sbjct: 450 RLTVDDFKNTVWMYSSWKRGMWIHVCHIRRKNIPNFVFPGGVRPPQPMKVAGEQGQV--- 506
Query: 429 KVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSINL 488
+KP + +KRK+ + + +H RE + ++ + S +L
Sbjct: 507 -----SKPMGFNSQKRKRDEIDAGSHP----------------RESTSLVENVES---DL 542
Query: 489 QFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNG-KVDGPMIGDPRNKGLSFNS 547
Q E E+VE N+ DS+ S E SSHN +++G S S
Sbjct: 543 QGE---------VKLEQVEVNVGDSLTKVICSSENSSHNSIELEGYARCSQPLGAASSAS 593
Query: 548 SNSKDAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVN 607
+ L IE S P V Q E+ E + L +Q ++F + N C +
Sbjct: 594 GSLSLGRALVIETT-SEPLV-HQCSSKEVG--ESQVGLVDQVQNFDVGKRVN----CVQS 645
Query: 608 IAAEATLTSMNGG---SSSSALSPNGGLGELE 636
AE + + G S S+L NGGL ELE
Sbjct: 646 STAERGMAAAAAGQGFSPCSSLFQNGGLEELE 677
>gi|359472651|ref|XP_002280091.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 587
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/450 (72%), Positives = 363/450 (80%), Gaps = 10/450 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGPRHATR+EDFFGELH+ML E PEV ELHPVPDAHVP
Sbjct: 92 IFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELHRMLAETPEVQELHPVPDAHVP 151
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VMKFKF+GVSIDLLYARLSLWVIPEDLDISQ++ILQN DEQTVRSLNGCRVTDQILRLVP
Sbjct: 152 VMKFKFNGVSIDLLYARLSLWVIPEDLDISQETILQNVDEQTVRSLNGCRVTDQILRLVP 211
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVARICQLYPNAVPS LVSRFFRV
Sbjct: 212 NIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLYPNAVPSTLVSRFFRV 271
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
YTQWRWPNPV+LC IEE LGL VWDPRRN KD+ HLMPIITPAYP MNSSYNVS STLR
Sbjct: 272 YTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIKDRNHLMPIITPAYPSMNSSYNVSWSTLR 331
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +E QRG+EI + ME + W TLFEPF FFEAYKNYL+IDI+AEN DLRNWKGW
Sbjct: 332 IMEEELQRGNEIVKEMETE--NTGWITLFEPFLFFEAYKNYLQIDITAENDVDLRNWKGW 389
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 368
VESRLR LT KIER T MLQCHPHP +FSD S+ + YFMGL+RK+G EGEQFDI
Sbjct: 390 VESRLRLLTRKIERDTGGMLQCHPHPAEFSDTSRSFHYCYFMGLRRKEGSAAQEGEQFDI 449
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALER 428
RLTV +FK V MY+ K GM I V H+ R+N+PNFVFPGGVRP +P K + +
Sbjct: 450 RLTVDDFKNTVWMYSSWKRGMWIHVCHIRRKNIPNFVFPGGVRPPQPMKVAGEQGQV--- 506
Query: 429 KVSSHTKPGADDGRKRKQTDDNVDTHLRNA 458
+KP + +KRK+ + + +H R +
Sbjct: 507 -----SKPMGFNSQKRKRDEIDAGSHPRES 531
>gi|42571529|ref|NP_973855.1| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|332191537|gb|AEE29658.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 586
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/612 (59%), Positives = 423/612 (69%), Gaps = 81/612 (13%)
Query: 49 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 108
ML+EMPEVTELHPVPDAHVP+M FK +GVSIDLLYA+L LWVIPEDLD+SQDSILQNADE
Sbjct: 1 MLSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNADE 60
Query: 109 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 168
QTVRSLNGCRVTDQILRLVP IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVAR
Sbjct: 61 QTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVAR 120
Query: 169 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 228
ICQLYPNA+P++LVSRFFRV+ QW WPN + LC+ +EGSLGLQVWDPR NPKD+ H+MPI
Sbjct: 121 ICQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPI 180
Query: 229 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 288
ITPAYPCMNSSYNVS STLRIM EFQRG+EICEAME N+A DWDTLFEPF FFEAYKN
Sbjct: 181 ITPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKA--DWDTLFEPFAFFEAYKN 238
Query: 289 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 348
YL+IDISA N DDLR WKGWVESRLRQLTLKIERH + ML CHPHP DF D S+PL+CSY
Sbjct: 239 YLQIDISAANVDDLRKWKGWVESRLRQLTLKIERH-FKMLHCHPHPHDFQDTSRPLHCSY 297
Query: 349 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 408
FMGLQRKQGVP EGEQFDIR TV+EFK V+ YTL PGM+ISV H+ RR+LPNFVFPG
Sbjct: 298 FMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFPG 357
Query: 409 GVRPSRPSKGTWDSRRALERK----------------VSSHTKPGAD---DGRKRKQTDD 449
GVRPS SKGTWDS R E + +SS +K G++ DG+KRK D
Sbjct: 358 GVRPSHTSKGTWDSNRRSEHRNSSTSSAPAATTTTTEMSSESKAGSNSPVDGKKRKWGDS 417
Query: 450 NVDT-HLRNAKCHA-TMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVE 507
T RN+K A ++P + E +P + +I SS +
Sbjct: 418 ETLTDQPRNSKHIAVSVPVENCEGGSPNPSVGSICSSPM--------------------- 456
Query: 508 NNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKD-AEKLAIEKIMSGPY 566
+ NGK + P+ DP ++F SKD E L IEKI +
Sbjct: 457 --------------KDYCTNGKSE-PISKDPPENVVAF----SKDPPESLPIEKIAT--- 494
Query: 567 VADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSAL 626
QA E ++LE+ + NQ + + ++A AT+ S+ S
Sbjct: 495 --PQAH--ETEELEESFDFGNQVIE--------QISHKVAVLSATATIPPFEATSNGSPF 542
Query: 627 SPNGGLGELEVL 638
P + ELEVL
Sbjct: 543 -PYEAVEELEVL 553
>gi|302804859|ref|XP_002984181.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
gi|300148030|gb|EFJ14691.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
Length = 496
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/412 (72%), Positives = 353/412 (85%), Gaps = 3/412 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG DIDTLCVGPRH +REEDFFG H ML M EVTELHPVPDAHVP
Sbjct: 87 IFTFGSYRLGVHGPGTDIDTLCVGPRHVSREEDFFGVFHGMLEAMSEVTELHPVPDAHVP 146
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VM+FKFSG+SIDLLYA L++W IPEDLDISQ+SIL+N DE +VRSLNGCRVTDQILRLVP
Sbjct: 147 VMRFKFSGISIDLLYAPLAVWTIPEDLDISQESILRNLDEPSVRSLNGCRVTDQILRLVP 206
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I++FRTTLRCM+ WA++RGVYSNV GFLGG+NWALLVARICQLYPNA+PSMLVSRFFRV
Sbjct: 207 NIEHFRTTLRCMKLWARKRGVYSNVTGFLGGVNWALLVARICQLYPNALPSMLVSRFFRV 266
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
YTQWRWPNPV+LC IEEGSLGL VWDPR+NP+D+ H MPIITPAYPCMNSSYNVS+STLR
Sbjct: 267 YTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPRDRTHQMPIITPAYPCMNSSYNVSSSTLR 326
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF R + ICE +E N+A +W LFEP+ FF+AYKNYL+ID+ A + DDLR WKGW
Sbjct: 327 VMVEEFSRANGICEVIEMNKA--EWSALFEPYAFFDAYKNYLQIDVFAADNDDLRRWKGW 384
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMGLQRKQGVPVGEGEQFD 367
VESRLRQLTLKIE+HTY MLQCHPHP DF D+SK +C++FMGLQ++QG+P EG+QFD
Sbjct: 385 VESRLRQLTLKIEKHTYGMLQCHPHPCDFVDESKEGKHCAFFMGLQKRQGLPSQEGQQFD 444
Query: 368 IRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 419
IRLTV+EF+Q+V+ Y L K GM I+V+HV RR +P +VFPGG +P+RP K T
Sbjct: 445 IRLTVEEFRQSVTGYQLWKEGMDIAVSHVRRRQIPAYVFPGGTKPARPPKVT 496
>gi|302780986|ref|XP_002972267.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
gi|300159734|gb|EFJ26353.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
Length = 548
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/426 (71%), Positives = 358/426 (84%), Gaps = 10/426 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG DIDTLCVGPRH +REEDFFG H ML M EVTELHPVPDAHVP
Sbjct: 87 IFTFGSYRLGVHGPGTDIDTLCVGPRHVSREEDFFGVFHGMLEAMSEVTELHPVPDAHVP 146
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VM+FKFSG+SIDLLYA L++W IPEDLDISQ+SIL+N DE +VRSLNGCRVTDQILRLVP
Sbjct: 147 VMRFKFSGISIDLLYAPLAVWTIPEDLDISQESILRNLDEPSVRSLNGCRVTDQILRLVP 206
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I++FRTTLRCM+ WA++RGVYSNV GFLGG+NWALLVARICQLYPNA+PSMLVSRFFRV
Sbjct: 207 NIEHFRTTLRCMKLWARKRGVYSNVTGFLGGVNWALLVARICQLYPNALPSMLVSRFFRV 266
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
YTQWRWPNPV+LC IEEGSLGL VWDPR+NP+D+ H MPIITPAYPCMNSSYNVS+STLR
Sbjct: 267 YTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPRDRTHQMPIITPAYPCMNSSYNVSSSTLR 326
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF R + ICE +E N+A +W LFEP+ FF+AYKNYL+ID+ A + DDLR WKGW
Sbjct: 327 VMVEEFSRANGICEVIEMNKA--EWSALFEPYAFFDAYKNYLQIDVFAADNDDLRRWKGW 384
Query: 309 VESRLRQLTLK------IERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMGLQRKQGVPVG 361
VESRLRQLTLK IE+HTY MLQCHPHP DF D+SK +C++FMGLQ++QG+P
Sbjct: 385 VESRLRQLTLKVGLDREIEKHTYGMLQCHPHPCDFVDESKEGKHCAFFMGLQKRQGLPSQ 444
Query: 362 EGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWD 421
EG+QFDIRLTV+EF+Q+V+ Y L K GM I+V+HV RR +P +VFPGG +P+RP K +
Sbjct: 445 EGQQFDIRLTVEEFRQSVTGYQLWKEGMDIAVSHVRRRQIPAYVFPGGTKPARPPKLS-S 503
Query: 422 SRRALE 427
SR+A E
Sbjct: 504 SRKARE 509
>gi|302770018|ref|XP_002968428.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
gi|300164072|gb|EFJ30682.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
Length = 534
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/443 (69%), Positives = 358/443 (80%), Gaps = 10/443 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCVGP HATREEDFF ELH +L E VTEL+PVP+AHVP
Sbjct: 75 IFTFGSYRLGVHGPGSDIDTLCVGPSHATREEDFFVELHNILAETENVTELNPVPEAHVP 134
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VMKFKF G+SIDLLYARLS W IPEDLDIS +SI+QN DEQ+V SLNGCRVTDQILRLVP
Sbjct: 135 VMKFKFDGISIDLLYARLSSWTIPEDLDISDESIMQNLDEQSVLSLNGCRVTDQILRLVP 194
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
IQ+FRTTLRCM++WAKRRGVYSNV GFLGGINWALLVARICQLYPNAVPS LVSRFFRV
Sbjct: 195 NIQHFRTTLRCMKYWAKRRGVYSNVTGFLGGINWALLVARICQLYPNAVPSTLVSRFFRV 254
Query: 189 YTQWRWPNPVLLCAIEE-GSLG-LQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
YTQWRWPNPV+LC IEE SLG LQVWDPR+NP+DK HLMPIITPAYPCMNSSYNVSTST
Sbjct: 255 YTQWRWPNPVMLCPIEERSSLGLLQVWDPRKNPRDKSHLMPIITPAYPCMNSSYNVSTST 314
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
LRIM EF RG+E+CE +E + A WD LFE F+FFEAY+NYL+ID+ A + D R WK
Sbjct: 315 LRIMTQEFNRGNEVCEQLEMSRA--TWDLLFESFSFFEAYRNYLQIDVVAIDDCDHRCWK 372
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY-CSYFMGLQRKQGVPVGEGEQ 365
GWVESRLRQLTLK+E+ TY MLQCHPHP DF D ++ Y C+YFMGLQRK G P+ EG+Q
Sbjct: 373 GWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDMARDGYHCAYFMGLQRKLGAPLHEGQQ 432
Query: 366 FDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKG-----TW 420
FDIR TV++FK V+ YT KPGM+I V+HV R+ +P FV+PGGV+P+RP++ +
Sbjct: 433 FDIRTTVEQFKLNVAAYTSWKPGMEIYVSHVRRKQIPLFVYPGGVKPARPARQHSGSPSS 492
Query: 421 DSRRALERKVSSHTKPGADDGRK 443
DS++ RK + PG +K
Sbjct: 493 DSKQGDSRKRLTSADPGGHCSKK 515
>gi|302774344|ref|XP_002970589.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
gi|300162105|gb|EFJ28719.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
Length = 534
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/443 (69%), Positives = 357/443 (80%), Gaps = 10/443 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCVGP HATREEDFF ELH +L E VTEL+PVP+AHVP
Sbjct: 75 IFTFGSYRLGVHGPGSDIDTLCVGPSHATREEDFFVELHNILAETENVTELNPVPEAHVP 134
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VMKFKF G+SIDLLYARLS W IPEDLDIS +SI+QN DEQ+V SLNGCRVTDQILRLVP
Sbjct: 135 VMKFKFDGISIDLLYARLSSWTIPEDLDISDESIMQNLDEQSVLSLNGCRVTDQILRLVP 194
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
IQ+FRTTLRCM++WAKRRGVYSNV GFLGGINWALLVARICQLYPNAVPS L+SRFFRV
Sbjct: 195 NIQHFRTTLRCMKYWAKRRGVYSNVTGFLGGINWALLVARICQLYPNAVPSTLISRFFRV 254
Query: 189 YTQWRWPNPVLLCAIEE-GSLG-LQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
YTQWRWPNPV+LC IEE SLG LQVWDPR+NP+DK HLMPIITPAYPCMNSSYNVSTST
Sbjct: 255 YTQWRWPNPVMLCPIEERSSLGLLQVWDPRKNPRDKSHLMPIITPAYPCMNSSYNVSTST 314
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
LRIM EF RG+E+CE +E + A WD LFE F+FFEAY+NYL+ID+ A + D R WK
Sbjct: 315 LRIMTQEFNRGNEVCEQLEMSRA--TWDLLFESFSFFEAYRNYLQIDVVAIDDCDHRCWK 372
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY-CSYFMGLQRKQGVPVGEGEQ 365
GWVESRLRQLTLK+E+ TY MLQCHPHP DF D ++ Y C+YFMGLQRK G P+ EG+Q
Sbjct: 373 GWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDMARDGYHCAYFMGLQRKLGAPLHEGQQ 432
Query: 366 FDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKG-----TW 420
FDIR TV++FK V+ YT K GM+I V+HV R+ +P FV+PGGV+P+RP++ +
Sbjct: 433 FDIRTTVEQFKLNVAAYTSWKQGMEIYVSHVRRKQIPLFVYPGGVKPARPARQHSGSPSS 492
Query: 421 DSRRALERKVSSHTKPGADDGRK 443
DS++ RK + PG +K
Sbjct: 493 DSKQGDSRKRLTSADPGGHCSKK 515
>gi|357138719|ref|XP_003570937.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 760
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 338/627 (53%), Positives = 409/627 (65%), Gaps = 43/627 (6%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGPRHATR + FF LH ML EMPEV+ELHPVPDAHVP
Sbjct: 107 IFTFGSYRLGVHGPGADIDTLCVGPRHATRNDYFFRCLHDMLAEMPEVSELHPVPDAHVP 166
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+ FK GVSIDLLYA L+ VIPEDLD+SQDSIL N DEQ VRSLNGCRVTDQILRLVP
Sbjct: 167 VLGFKLCGVSIDLLYANLAHVVIPEDLDLSQDSILHNVDEQAVRSLNGCRVTDQILRLVP 226
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I +FRTTLR MR+W KRRGVYSNV GFLGGINWA+LVARICQLYPNA PSML+SRFFRV
Sbjct: 227 NIPSFRTTLRFMRYWGKRRGVYSNVMGFLGGINWAILVARICQLYPNASPSMLISRFFRV 286
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y+QW+WPNPV LC IEEG LGL VWDPRRN +D+ H MPIITPAYPCMNSSYNVS ST
Sbjct: 287 YSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFRDRGHQMPIITPAYPCMNSSYNVSVSTRY 346
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M+ EF RG+EIC+A+++N A WD LFEP+ FFE Y+NYL + ISA N DDLRNWKGW
Sbjct: 347 VMVQEFTRGYEICQAIDENRA--TWDDLFEPYPFFELYRNYLEVVISARNEDDLRNWKGW 404
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 368
VESRLR L LK ER+T+ ML HPHP DFSD S+PL+ YFMGL RKQ V E EQFDI
Sbjct: 405 VESRLRTLVLKFERYTHEMLLAHPHPRDFSDGSRPLHSFYFMGLWRKQTVQPQEAEQFDI 464
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALER 428
R V EFK +V Y R GM I V+HV R+++P FVFPGGVRP R S+ + A+ R
Sbjct: 465 RGIVNEFKSSVCAYAHRGEGMDIEVSHVKRKDIPLFVFPGGVRPPRSSRTAGRNGHAVSR 524
Query: 429 KVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSINL 488
S G + + T PS+ + E + +++ ++S N
Sbjct: 525 NDVSADADGQVGNPLVTEGWSDPPTQ---------GPSAGYQLPENTSLLANLASRLSNN 575
Query: 489 QFEHM---DAN------------ELAGSNREKVENNLTDSIRGSRNSVEVSSHNGKVDGP 533
+ +H+ D+N GS V+N + D I+ NS+ +S NG GP
Sbjct: 576 ETQHILNGDSNLHTESVEHEHPVRFLGSTSAPVDNAVLDVIKPP-NSIPSTSSNG---GP 631
Query: 534 MIGDPRNKGLSFNSSNSKDAEKLAIEKIM-SGPYVADQAFPLELDQLEDDLELKNQAKDF 592
G G+SFNSS+ K+++ + + ++ S P D L Q + D K
Sbjct: 632 TNG----LGISFNSSH-KESKGIHVNNLVTSSPTTTDGLDELVWPQAKSD-------KIH 679
Query: 593 AGSTQNNSLGSCAVNIAAEATLTSMNG 619
A + + L C+ +A S +G
Sbjct: 680 ANTAHVSPLEGCSGTSLGQAVNLSSHG 706
>gi|357124126|ref|XP_003563757.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 700
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 303/515 (58%), Positives = 379/515 (73%), Gaps = 18/515 (3%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
VL G + VHGPGAD+DTLCVGP + REEDFF LH +L + EVTEL PVPDAHV
Sbjct: 78 VLFTFGSYRLGVHGPGADVDTLCVGPSYVNREEDFFIVLHDILAQTEEVTELQPVPDAHV 137
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL V+P DLDISQ+S+L + DE TVRSLNGCRV DQILRLV
Sbjct: 138 PVMKFKFHGISIDLLYASVSLLVVPSDLDISQESVLYDIDEATVRSLNGCRVADQILRLV 197
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P I+NFRTTLRC++ WAKRRGVYSNV GFLGG+NWALLVAR+CQLYPNAVPSMLVSRFFR
Sbjct: 198 PNIENFRTTLRCLKHWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFR 257
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
V+TQWRWPNPV+LCAIEE LG VWDPR+NP+D+ H MPIITPAYPCMNSSYNVSTSTL
Sbjct: 258 VFTQWRWPNPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTL 317
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M+++FQ G++IC+ +E N+A +W LFE F FFEAYKNYL++DI AE+ +DLR WKG
Sbjct: 318 RVMIEQFQFGNKICQEIELNKA--NWPALFESFQFFEAYKNYLQVDIIAEDDEDLRLWKG 375
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESRLRQLTLKIER TY LQCHP+P +++D S+ +C++FMGL R GV + EG+QF
Sbjct: 376 WVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSRQCAHCAFFMGLSRNVGVKIEEGQQF 435
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 426
DIR TV EF+ ++MY KPGM+++V+HV R+ +P +VFP G R RP + +++
Sbjct: 436 DIRGTVDEFRHDINMYMFWKPGMELAVSHVRRKEIPAYVFPEGYRRPRPQRHVSHQQQSD 495
Query: 427 ERKVSSHTKPGADDGR-KRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSS 485
+ + G+ DG+ KRK D C + +S P S+ SS +
Sbjct: 496 KNDTENGNMTGSPDGQLKRKHDSAGTDD---TEPCRSVKRASRASVSPVHPTTSSPSSGN 552
Query: 486 INLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 520
I ++E +N++K+ +N + GS+NS
Sbjct: 553 I--------SDEATCNNQKKMSSNASG---GSQNS 576
>gi|255549812|ref|XP_002515957.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544862|gb|EEF46377.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 712
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 287/438 (65%), Positives = 347/438 (79%), Gaps = 5/438 (1%)
Query: 19 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 78
VHGPGADIDTLCVGP + REEDFF LH +L EM EVTEL PVPDAHVPVM+FKF G+S
Sbjct: 68 VHGPGADIDTLCVGPSYVNREEDFFFVLHNILAEMEEVTELQPVPDAHVPVMRFKFDGIS 127
Query: 79 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 138
IDLLYA +SL V+PEDLDIS S+L + DE TVRSLNGCRV DQIL+LVP +++FRTTLR
Sbjct: 128 IDLLYASISLLVVPEDLDISDVSVLYDVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLR 187
Query: 139 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 198
C++FWAKRRGVYSNV GFLGG+NWALLVARICQLYPNA+PSMLVSRFFRVYTQWRWPNPV
Sbjct: 188 CLKFWAKRRGVYSNVTGFLGGVNWALLVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPV 247
Query: 199 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 258
+LC IEE LG +WDPR+NP+D+ H MPIITPAYPCMNSSYNVSTSTLR+MM++FQ G+
Sbjct: 248 MLCPIEEDELGFSIWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQYGN 307
Query: 259 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 318
+ICE +E W TLFEP+ FFE+YKNYL++DI A + DDLR WKGWVESRLRQLTL
Sbjct: 308 KICEEIEL--IKTQWATLFEPYLFFESYKNYLQVDIVATDVDDLRAWKGWVESRLRQLTL 365
Query: 319 KIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ 377
I+R TY LQCHP+P ++ D SKP +C++FMGLQRKQG + EG+QFDIR TV EF+
Sbjct: 366 MIDRDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKQGEMIQEGQQFDIRGTVDEFRN 425
Query: 378 AVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT--WDSRRALERKVSSHTK 435
+++MY KPGM+I V+HV R+ +P++VFP G R +R + T S + ++
Sbjct: 426 SINMYMFWKPGMEIYVSHVRRKQIPSYVFPDGYRRARHPRVTAQQQSDKTCCGDSDAYGN 485
Query: 436 PGADDGRKRKQTDDNVDT 453
++ G KRK+ D +D
Sbjct: 486 GSSERGHKRKKDSDEIDV 503
>gi|326517509|dbj|BAK03673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 294/422 (69%), Positives = 332/422 (78%), Gaps = 2/422 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGPRHATR + FF LH ML EMPEV+ELHPVPDAHVP
Sbjct: 86 IFTFGSYRLGVHGPGADIDTLCVGPRHATRNDYFFRCLHDMLAEMPEVSELHPVPDAHVP 145
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+ FK GVSIDLLYA L+ VIP+DLD+SQDSIL N DEQ VRSLNGCRVTDQILRLVP
Sbjct: 146 VLGFKLCGVSIDLLYANLAHVVIPDDLDLSQDSILHNVDEQAVRSLNGCRVTDQILRLVP 205
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I +FRTTLR MR+W KRRGVYSNV GFLGGINWA+LVARICQLYPNA PSML+SRFFRV
Sbjct: 206 NIPSFRTTLRFMRYWGKRRGVYSNVMGFLGGINWAILVARICQLYPNASPSMLISRFFRV 265
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y+QW+WPNPV LC IEEG LGL VWDPRRN +D+ H MPIITPAYPCMNSSYNVSTST
Sbjct: 266 YSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFRDRGHQMPIITPAYPCMNSSYNVSTSTRY 325
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M+ EF RG+EIC+A+++N A WD LFEP+ FFE YKNYL + I+A + DDLRNWKGW
Sbjct: 326 VMIQEFTRGYEICQAIDENRA--TWDDLFEPYPFFELYKNYLEVGITARSEDDLRNWKGW 383
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 368
VESRLR L LK ER+T+ ML HPHP DFSD S+PL+ YFMGL RKQ E EQFDI
Sbjct: 384 VESRLRTLVLKFERYTHEMLLAHPHPRDFSDGSRPLHSFYFMGLWRKQTAQPQEAEQFDI 443
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALER 428
R V EFK AV Y R+ GM I V+HV R+++P FVFPGGVRP R S+ S R + R
Sbjct: 444 RGIVNEFKSAVLAYAHRREGMDIEVSHVKRKDIPLFVFPGGVRPPRSSRTAARSSRTVSR 503
Query: 429 KV 430
V
Sbjct: 504 NV 505
>gi|224284360|gb|ACN39915.1| unknown [Picea sitchensis]
Length = 701
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 282/412 (68%), Positives = 342/412 (83%), Gaps = 3/412 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGP +A +EEDFF LH ML EMPEV EL+ VPDAHVP
Sbjct: 97 VFTFGSYRLGVHGPGADIDTLCVGPEYADQEEDFFILLHDMLAEMPEVMELNRVPDAHVP 156
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VMKFKF G+SIDLLYA ++L ++P+DLDISQ+S+L N DEQTVRSLNGCRV +QILRLVP
Sbjct: 157 VMKFKFRGISIDLLYASVALRIVPDDLDISQESVLYNVDEQTVRSLNGCRVNEQILRLVP 216
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+++FRTTLRCM+FWAKRRGVYSNV GFLGG+NWALLVAR+CQLYPNA+PSMLVSRFFRV
Sbjct: 217 NVEHFRTTLRCMKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRV 276
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+TQWRWPNPV+L +I+E LG VWDPR+NP+D+ H MPIITPAYP MNSSYNVSTSTLR
Sbjct: 277 FTQWRWPNPVMLRSIKEEELGFPVWDPRKNPRDRTHHMPIITPAYPGMNSSYNVSTSTLR 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M ++FQ+G+++CE +E N+A +W LF+P+ FFEAYKNYL++DI A + DDLR WKGW
Sbjct: 337 VMTEQFQQGNKMCEDIEMNKA--NWSALFDPYPFFEAYKNYLQVDIVAADQDDLRLWKGW 394
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQFD 367
VESRLRQLTLKIER T+ MLQCHP+P ++ D SK +C++FMGLQRKQGV + EG+QFD
Sbjct: 395 VESRLRQLTLKIERDTFGMLQCHPYPTEYVDNSKQCPHCAFFMGLQRKQGVLIQEGQQFD 454
Query: 368 IRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 419
IR TV EF+Q+V MY KPGM I V+HV R+ +P++VFP GVR R +
Sbjct: 455 IRGTVDEFRQSVGMYMFWKPGMDIYVSHVRRKQIPSYVFPEGVRRVRSGRAA 506
>gi|218198073|gb|EEC80500.1| hypothetical protein OsI_22746 [Oryza sativa Indica Group]
Length = 748
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 289/420 (68%), Positives = 336/420 (80%), Gaps = 2/420 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGPRHATR E FF L+ ML +MPEVTELHPVPDAHVP
Sbjct: 88 IFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVDMPEVTELHPVPDAHVP 147
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KFK +GVSIDLLYA L+ VIPEDLD+S DSIL N DEQTVRSLNGCRVTD+ILRLVP
Sbjct: 148 VLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVRSLNGCRVTDKILRLVP 207
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I FRTTLR MRFWAKRRGVYSNV GFLGGINWALLVARICQLYPNA PSML+SRFF+V
Sbjct: 208 NILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVARICQLYPNASPSMLISRFFKV 267
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y++W+WPNPV+LC IEEGSLGL VWDPRRN +D+ H MPIITPAYP MNSSYNVS ST
Sbjct: 268 YSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYPSMNSSYNVSISTRH 327
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M+ EF R +IC+A+++ +A DWD LFEP+ FFE+Y+NYL+I+I+A N DDLRNWKGW
Sbjct: 328 VMVQEFTRASDICQAIDERKA--DWDALFEPYPFFESYRNYLKIEITARNEDDLRNWKGW 385
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 368
VESRLR L LKIER T ML HP+P DF D S+PL+C YFMGL +KQ E EQ+DI
Sbjct: 386 VESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPLHCFYFMGLWKKQISQAQEAEQYDI 445
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALER 428
R V EFK + Y + GM+I V+HV R+++P+FVFPGG+RPSRPS+ RA+ R
Sbjct: 446 RAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPSRPSRTVGKEARAVSR 505
>gi|255550972|ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus communis]
gi|223544354|gb|EEF45875.1| Poly(A) polymerase beta, putative [Ricinus communis]
Length = 754
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 305/482 (63%), Positives = 369/482 (76%), Gaps = 5/482 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGPGADIDTLCVGP + REEDFF LH +L EM E+TEL PVPDAHV
Sbjct: 103 VIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFILLHDILAEMDEITELQPVPDAHV 162
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L + DEQTVRSLNGCRV DQIL+LV
Sbjct: 163 PVMKFKFQGISIDLLYASISLPVVPEDLDISHGSVLYDVDEQTVRSLNGCRVADQILKLV 222
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P +++FRTTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR+CQLYPNA+PSMLVSRFFR
Sbjct: 223 PNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARLCQLYPNAIPSMLVSRFFR 282
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LCAIEE LG VWDPRRNP+D++H MPIITPAYPCMNSSYNVS STL
Sbjct: 283 VYTQWRWPNPVMLCAIEEDELGFPVWDPRRNPRDRFHHMPIITPAYPCMNSSYNVSISTL 342
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+MM++FQ G++ICE +E N+A W LFEP+ FFEAYKNYL+IDI A +ADDL WKG
Sbjct: 343 RVMMEQFQYGNKICEEIELNKA--QWSALFEPYLFFEAYKNYLQIDIIAADADDLLAWKG 400
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESRLRQLTLKIER T MLQCHP+P ++ D SK +C++FMGLQR++GV EG+QF
Sbjct: 401 WVESRLRQLTLKIERDTIGMLQCHPYPNEYIDTSKQCPHCAFFMGLQRRKGVSGQEGQQF 460
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 426
DIR TV+EF+Q ++MY KPGM + V+H RR LP FVFP G + SR S+ + +
Sbjct: 461 DIRGTVEEFRQEINMYMFWKPGMDVYVSHARRRQLPAFVFPDGYKRSRTSRHP-NQQAGK 519
Query: 427 ERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSI 486
VS+ ++ G+ +G +++ D V +R K S + SP +TISS
Sbjct: 520 PSDVSATSRAGSVEGHLKRKNDHEV-VDVRPDKPEKRASVSPQRLQSVSPESNTISSGRT 578
Query: 487 NL 488
+L
Sbjct: 579 SL 580
>gi|222635475|gb|EEE65607.1| hypothetical protein OsJ_21148 [Oryza sativa Japonica Group]
Length = 748
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 289/420 (68%), Positives = 336/420 (80%), Gaps = 2/420 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGPRHATR E FF L+ ML +MPEVTELHPVPDAHVP
Sbjct: 88 IFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVDMPEVTELHPVPDAHVP 147
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KFK +GVSIDLLYA L+ VIPEDLD+S DSIL N DEQTVRSLNGCRVTD+ILRLVP
Sbjct: 148 VLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVRSLNGCRVTDKILRLVP 207
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I FRTTLR MRFWAKRRGVYSNV GFLGGINWALLVARICQLYPNA PSML+SRFF+V
Sbjct: 208 NILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVARICQLYPNASPSMLISRFFKV 267
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y++W+WPNPV+LC IEEGSLGL VWDPRRN +D+ H MPIITPAYP MNSSYNVS ST
Sbjct: 268 YSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYPSMNSSYNVSISTRH 327
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M+ EF R +IC+A+++ +A DWD LFEP+ FFE+Y+NYL+I+I+A N DDLRNWKGW
Sbjct: 328 VMVQEFTRASDICQAIDERKA--DWDALFEPYPFFESYRNYLKIEITARNEDDLRNWKGW 385
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 368
VESRLR L LKIER T ML HP+P DF D S+PL+C YFMGL +KQ E EQ+DI
Sbjct: 386 VESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPLHCFYFMGLWKKQISQAQEAEQYDI 445
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALER 428
R V EFK + Y + GM+I V+HV R+++P+FVFPGG+RPSRPS+ RA+ R
Sbjct: 446 RAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPSRPSRTVGKEARAVSR 505
>gi|297605720|ref|NP_001057507.2| Os06g0319600 [Oryza sativa Japonica Group]
gi|255676996|dbj|BAF19421.2| Os06g0319600, partial [Oryza sativa Japonica Group]
Length = 769
Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 289/420 (68%), Positives = 336/420 (80%), Gaps = 2/420 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGPRHATR E FF L+ ML +MPEVTELHPVPDAHVP
Sbjct: 109 IFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVDMPEVTELHPVPDAHVP 168
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KFK +GVSIDLLYA L+ VIPEDLD+S DSIL N DEQTVRSLNGCRVTD+ILRLVP
Sbjct: 169 VLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVRSLNGCRVTDKILRLVP 228
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I FRTTLR MRFWAKRRGVYSNV GFLGGINWALLVARICQLYPNA PSML+SRFF+V
Sbjct: 229 NILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVARICQLYPNASPSMLISRFFKV 288
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y++W+WPNPV+LC IEEGSLGL VWDPRRN +D+ H MPIITPAYP MNSSYNVS ST
Sbjct: 289 YSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYPSMNSSYNVSISTRH 348
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M+ EF R +IC+A+++ +A DWD LFEP+ FFE+Y+NYL+I+I+A N DDLRNWKGW
Sbjct: 349 VMVQEFTRASDICQAIDERKA--DWDALFEPYPFFESYRNYLKIEITARNEDDLRNWKGW 406
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 368
VESRLR L LKIER T ML HP+P DF D S+PL+C YFMGL +KQ E EQ+DI
Sbjct: 407 VESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPLHCFYFMGLWKKQISQAQEAEQYDI 466
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALER 428
R V EFK + Y + GM+I V+HV R+++P+FVFPGG+RPSRPS+ RA+ R
Sbjct: 467 RAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPSRPSRTVGKEARAVSR 526
>gi|242038623|ref|XP_002466706.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
gi|241920560|gb|EER93704.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
Length = 750
Score = 623 bits (1606), Expect = e-175, Method: Compositional matrix adjust.
Identities = 298/459 (64%), Positives = 342/459 (74%), Gaps = 16/459 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGPRHATR E FF LH ML EMPEV+ELHPVPDAHVP
Sbjct: 88 IFTFGSYRLGVHGPGADIDTLCVGPRHATRNEYFFRWLHDMLAEMPEVSELHPVPDAHVP 147
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+ FK +GVSIDLLYA L+ VIPEDLD+SQDSIL N DEQTVRSLNGCRVTDQILRLVP
Sbjct: 148 VLGFKINGVSIDLLYANLAHAVIPEDLDLSQDSILNNVDEQTVRSLNGCRVTDQILRLVP 207
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I +FRTTLR +R+W KRRGVYSNV GFLGGINWA+LV RICQLYPNA PSML+SRFFRV
Sbjct: 208 NILSFRTTLRFIRYWGKRRGVYSNVMGFLGGINWAILVGRICQLYPNASPSMLISRFFRV 267
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y++W+WPNPV+LC IEEG LGL VWDPRRN +D+ H MPIITPAYPCMNSSYNVS ST
Sbjct: 268 YSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYRDRGHQMPIITPAYPCMNSSYNVSVSTRY 327
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M EF R EIC+A+++ +A DWD LFEP+ FFE+YKNYL ++I+A N D+LR+WKGW
Sbjct: 328 VMTQEFTRAFEICQAIDEGKA--DWDALFEPYPFFESYKNYLEVNITARNEDELRSWKGW 385
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 368
VESRLR L LKIER+++ M+ HP+P DFSDKS+PL+C YFMGL RKQ E EQFDI
Sbjct: 386 VESRLRTLVLKIERYSHEMILAHPYPKDFSDKSRPLHCFYFMGLWRKQTTQTQEAEQFDI 445
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALER 428
R V EFK + Y K GM I V+HV R+ +P FVFPGGVRPSR S+ + R
Sbjct: 446 RGIVNEFKNTICAYQQWKEGMDIEVSHVKRKEIPLFVFPGGVRPSRSSRTAHKNSR---- 501
Query: 429 KVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSS 467
T P D DD V L A C P S
Sbjct: 502 -----TVPTCD-----VSADDQVGNLLGVASCSDAQPVS 530
>gi|414872023|tpg|DAA50580.1| TPA: hypothetical protein ZEAMMB73_982818 [Zea mays]
Length = 745
Score = 623 bits (1606), Expect = e-175, Method: Compositional matrix adjust.
Identities = 293/430 (68%), Positives = 340/430 (79%), Gaps = 3/430 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGPRHATR E FF LH +L EMPEV+ELHPVPDAHVP
Sbjct: 88 IFTFGSYRLGVHGPGADIDTLCVGPRHATRNEYFFRWLHDILAEMPEVSELHPVPDAHVP 147
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+ FK +GVSIDLLYA L+ VIPEDLD+SQDSIL N DEQTVRSLNGCRVTDQILRLVP
Sbjct: 148 VLGFKINGVSIDLLYANLAHAVIPEDLDLSQDSILHNVDEQTVRSLNGCRVTDQILRLVP 207
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I +FRTTLR +R W KRRGVYSNV GFLGGINWA+LV RICQLYPNA PSML+SRFFRV
Sbjct: 208 NILSFRTTLRFIRCWGKRRGVYSNVMGFLGGINWAILVGRICQLYPNASPSMLISRFFRV 267
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y++W+WPNPV+LC IEEG LGL VWDPRRN +D+ H MPIITPAYPCMNSSYNVS ST
Sbjct: 268 YSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYRDRGHQMPIITPAYPCMNSSYNVSVSTRY 327
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M+ EF + EIC+A+++ +A DWD LFEP+ FFE+YKNYL ++I+A N DDLRNWKGW
Sbjct: 328 VMVQEFTQAFEICQAIDEGKA--DWDALFEPYPFFESYKNYLEVNITARNEDDLRNWKGW 385
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 368
VESRLR L LKIER+++ M+ HP+P DFSDKS+PL+ YFMGL RKQ E EQFDI
Sbjct: 386 VESRLRTLVLKIERYSHEMILAHPYPKDFSDKSRPLHIFYFMGLWRKQTTQAQETEQFDI 445
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL-E 427
R V EFK + Y RK GM I V+HV R+ +P FVFPGGVRPSR S+ T + RA+
Sbjct: 446 RGIVNEFKNTICAYQHRKEGMDIEVSHVKRKEIPLFVFPGGVRPSRTSRTTHKNSRAIPT 505
Query: 428 RKVSSHTKPG 437
R VS+ + G
Sbjct: 506 RDVSADDQVG 515
>gi|58220769|gb|AAW68016.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 748
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 288/420 (68%), Positives = 335/420 (79%), Gaps = 2/420 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGPRHATR E FF L+ ML +MPEVTELHPVPDAHVP
Sbjct: 88 IFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVDMPEVTELHPVPDAHVP 147
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KFK +GVSIDLLYA L+ VIPEDLD+S DSIL N DEQTVRSLNGCRVTD+ILRLVP
Sbjct: 148 VLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVRSLNGCRVTDKILRLVP 207
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I FRTTLR +RFWAKRRGVYSNV GFLGGINWALLVARICQLYPNA PSML+SRFF+V
Sbjct: 208 NILTFRTTLRSLRFWAKRRGVYSNVIGFLGGINWALLVARICQLYPNASPSMLISRFFKV 267
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y++W+WPNPV+LC IEEGSLGL VWDPRRN +D+ H MPIITPAYP MNSSYNVS ST
Sbjct: 268 YSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYPSMNSSYNVSISTRH 327
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M+ EF R +IC+A+++ EA DWD LFEP+ FFE+Y+NYL+I+I+A N DDLRNWKGW
Sbjct: 328 VMVQEFTRASDICQAIDEREA--DWDALFEPYPFFESYRNYLKIEITARNEDDLRNWKGW 385
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 368
VESRLR L LKIER T ML HP+P DF D S+PL+C YFMGL +KQ E EQ+DI
Sbjct: 386 VESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPLHCFYFMGLWKKQISQAQEAEQYDI 445
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALER 428
R V EFK + Y + GM+I V+HV R+++P+FVFPG +RPSRPS+ RA+ R
Sbjct: 446 RAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGRIRPSRPSRTVGKEARAVSR 505
>gi|53792977|dbj|BAD54151.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
Length = 740
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 282/442 (63%), Positives = 353/442 (79%), Gaps = 3/442 (0%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
VL G + VHGPGADIDTLCVGP + REEDFF LH +L + EVTEL PVPDAHV
Sbjct: 96 VLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEEVTELQPVPDAHV 155
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE TVRSLNGCRV DQILRLV
Sbjct: 156 PVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEVTVRSLNGCRVADQILRLV 215
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++NFRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQLYPNAVPSMLVSRFFR
Sbjct: 216 PNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFR 275
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
V+TQW+WPNPV+LCAIEE LG VWDPR+ +D+ H MPIITPAYPCMNSSYNVSTSTL
Sbjct: 276 VFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSSYNVSTSTL 335
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+MM++FQ G++IC+ ++ ++A +W LFEPF FFEAYKNYL++DI AE+ +DLR WKG
Sbjct: 336 RVMMEQFQFGNKICQEIDISKA--NWSALFEPFQFFEAYKNYLQVDIIAEDGEDLRLWKG 393
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C++FMGL RK+G + EG+QF
Sbjct: 394 WVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGAKIQEGQQF 453
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 426
DIR TV EF+ + MY +PGM+++V+HV R+ +P++VFP G + RPS+ +++
Sbjct: 454 DIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRPSRHINHPQQSN 513
Query: 427 ERKVSSHTKPGADDGRKRKQTD 448
+ V T + DG+ +++ D
Sbjct: 514 KNDVEDGTANRSPDGQPKRKHD 535
>gi|225442450|ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 770
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 281/411 (68%), Positives = 336/411 (81%), Gaps = 3/411 (0%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
VL G + VHGPG DIDTLC+GP + +REEDFF LH +L +M EVTEL PVPDAHV
Sbjct: 95 VLFTFGSYRLGVHGPGTDIDTLCIGPSYVSREEDFFFILHNILADMEEVTELQPVPDAHV 154
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L N DE TVRSLNGCRV DQIL+LV
Sbjct: 155 PVMKFKFDGISIDLLYASISLLVVPEDLDISDLSVLYNIDEPTVRSLNGCRVADQILKLV 214
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P +++F TTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR+CQLYPNAVPSMLVSRFFR
Sbjct: 215 PNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFR 274
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LCAIEE LG VWDPR+NP+D+ H MPIITPAYPCMNSSYNVS STL
Sbjct: 275 VYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSISTL 334
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+MM++FQ G++ICE +E + A W LFEP+ FFE+YKNYL++DI A + DDLR WKG
Sbjct: 335 RVMMEQFQYGNKICEGIELSNA--QWGALFEPYLFFESYKNYLQVDIVAVDIDDLRAWKG 392
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESRLRQLTL IER T+ LQCHP+P ++ D SK +C++FMGLQRKQG + EG+QF
Sbjct: 393 WVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCAFFMGLQRKQGEIIQEGQQF 452
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 417
DIR TV EF+ +++MY KPGM+I V+HV R+ +P++VFP G + SRP +
Sbjct: 453 DIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPEGYKRSRPQR 503
>gi|297724965|ref|NP_001174846.1| Os06g0558700 [Oryza sativa Japonica Group]
gi|255677141|dbj|BAH93574.1| Os06g0558700 [Oryza sativa Japonica Group]
Length = 708
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 282/442 (63%), Positives = 353/442 (79%), Gaps = 3/442 (0%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
VL G + VHGPGADIDTLCVGP + REEDFF LH +L + EVTEL PVPDAHV
Sbjct: 96 VLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEEVTELQPVPDAHV 155
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE TVRSLNGCRV DQILRLV
Sbjct: 156 PVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEVTVRSLNGCRVADQILRLV 215
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++NFRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQLYPNAVPSMLVSRFFR
Sbjct: 216 PNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFR 275
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
V+TQW+WPNPV+LCAIEE LG VWDPR+ +D+ H MPIITPAYPCMNSSYNVSTSTL
Sbjct: 276 VFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSSYNVSTSTL 335
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+MM++FQ G++IC+ ++ ++A +W LFEPF FFEAYKNYL++DI AE+ +DLR WKG
Sbjct: 336 RVMMEQFQFGNKICQEIDISKA--NWSALFEPFQFFEAYKNYLQVDIIAEDGEDLRLWKG 393
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C++FMGL RK+G + EG+QF
Sbjct: 394 WVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGAKIQEGQQF 453
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 426
DIR TV EF+ + MY +PGM+++V+HV R+ +P++VFP G + RPS+ +++
Sbjct: 454 DIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRPSRHINHPQQSN 513
Query: 427 ERKVSSHTKPGADDGRKRKQTD 448
+ V T + DG+ +++ D
Sbjct: 514 KNDVEDGTANRSPDGQPKRKHD 535
>gi|58220767|gb|AAW68015.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 708
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 282/442 (63%), Positives = 353/442 (79%), Gaps = 3/442 (0%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
VL G + VHGPGADIDTLCVGP + REEDFF LH +L + EVTEL PVPDAHV
Sbjct: 96 VLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEEVTELQPVPDAHV 155
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE TVRSLNGCRV DQILRLV
Sbjct: 156 PVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEVTVRSLNGCRVADQILRLV 215
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++NFRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQLYPNAVPSMLVSRFFR
Sbjct: 216 PNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFR 275
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
V+TQW+WPNPV+LCAIEE LG VWDPR+ +D+ H MPIITPAYPCMNSSYNVSTSTL
Sbjct: 276 VFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSSYNVSTSTL 335
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+MM++FQ G++IC+ ++ ++A +W LFEPF FFEAYKNYL++DI AE+ +DLR WKG
Sbjct: 336 RVMMEQFQFGNKICQEIDISKA--NWSALFEPFQFFEAYKNYLQVDIIAEDGEDLRLWKG 393
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C++FMGL RK+G + EG+QF
Sbjct: 394 WVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGAKIQEGQQF 453
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 426
DIR TV EF+ + MY +PGM+++V+HV R+ +P++VFP G + RPS+ +++
Sbjct: 454 DIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRPSRHINHPQQSN 513
Query: 427 ERKVSSHTKPGADDGRKRKQTD 448
+ V T + DG+ +++ D
Sbjct: 514 KNDVEDGTANRSPDGQPKRKHD 535
>gi|147790301|emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]
Length = 778
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 281/411 (68%), Positives = 336/411 (81%), Gaps = 3/411 (0%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
VL G + VHGPG DIDTLC+GP + +REEDFF LH +L +M EVTEL PVPDAHV
Sbjct: 86 VLFTFGSYRLGVHGPGTDIDTLCIGPSYVSREEDFFFILHNILADMEEVTELQPVPDAHV 145
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L N DE TVRSLNGCRV DQIL+LV
Sbjct: 146 PVMKFKFDGISIDLLYASISLLVVPEDLDISDLSVLYNIDEPTVRSLNGCRVADQILKLV 205
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P +++F TTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR+CQLYPNAVPSMLVSRFFR
Sbjct: 206 PNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFR 265
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LCAIEE LG VWDPR+NP+D+ H MPIITPAYPCMNSSYNVS STL
Sbjct: 266 VYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSISTL 325
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+MM++FQ G++ICE +E + A W LFEP+ FFE+YKNYL++DI A + DDLR WKG
Sbjct: 326 RVMMEQFQYGNKICEGIELSNA--QWGALFEPYLFFESYKNYLQVDIVAVDIDDLRAWKG 383
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESRLRQLTL IER T+ LQCHP+P ++ D SK +C++FMGLQRKQG + EG+QF
Sbjct: 384 WVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCAFFMGLQRKQGEIIQEGQQF 443
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 417
DIR TV EF+ +++MY KPGM+I V+HV R+ +P++VFP G + SRP +
Sbjct: 444 DIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPEGYKRSRPQR 494
>gi|413943851|gb|AFW76500.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943852|gb|AFW76501.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 702
Score = 620 bits (1598), Expect = e-175, Method: Compositional matrix adjust.
Identities = 286/459 (62%), Positives = 356/459 (77%), Gaps = 5/459 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
VL G + VHGPGADIDTLCVGP + REEDFF LH +L + +VTEL PVPDAHV
Sbjct: 87 VLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHGILAQTEDVTELQPVPDAHV 146
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE TVRSLNGCRV DQI+RLV
Sbjct: 147 PVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDEATVRSLNGCRVADQIIRLV 206
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P +NFRT LRC+++WAKRRGVYSNV GFLGG+NWALLVAR+CQLYPNAVPSMLVSRFFR
Sbjct: 207 PNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFR 266
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
V+TQW+WPNPV+LC+IEE LG VWDPR+NP+D+ H MPIITPAYPCMNSSYNVSTSTL
Sbjct: 267 VFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSSYNVSTSTL 326
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M+++FQ G+ IC+ +E N+ W LFEPF FFEAYKNYL++DI AE+ +DLR WKG
Sbjct: 327 RVMLEQFQFGNRICQEIEMNKT--SWPALFEPFQFFEAYKNYLQVDIIAEDDEDLRLWKG 384
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C++FMGL RK+GV + EG+QF
Sbjct: 385 WVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKIQEGQQF 444
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 426
DIR TV EF+ ++MY KPGM+++V+HV R+ +P +VFP G + RPS+ + ++
Sbjct: 445 DIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSRHV--NHQSD 502
Query: 427 ERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMP 465
+ T + D + +++ D +R AK +T P
Sbjct: 503 KNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSP 541
>gi|413943854|gb|AFW76503.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943855|gb|AFW76504.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 686
Score = 620 bits (1598), Expect = e-175, Method: Compositional matrix adjust.
Identities = 286/459 (62%), Positives = 356/459 (77%), Gaps = 5/459 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
VL G + VHGPGADIDTLCVGP + REEDFF LH +L + +VTEL PVPDAHV
Sbjct: 87 VLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHGILAQTEDVTELQPVPDAHV 146
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE TVRSLNGCRV DQI+RLV
Sbjct: 147 PVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDEATVRSLNGCRVADQIIRLV 206
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P +NFRT LRC+++WAKRRGVYSNV GFLGG+NWALLVAR+CQLYPNAVPSMLVSRFFR
Sbjct: 207 PNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFR 266
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
V+TQW+WPNPV+LC+IEE LG VWDPR+NP+D+ H MPIITPAYPCMNSSYNVSTSTL
Sbjct: 267 VFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSSYNVSTSTL 326
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M+++FQ G+ IC+ +E N+ W LFEPF FFEAYKNYL++DI AE+ +DLR WKG
Sbjct: 327 RVMLEQFQFGNRICQEIEMNK--TSWPALFEPFQFFEAYKNYLQVDIIAEDDEDLRLWKG 384
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C++FMGL RK+GV + EG+QF
Sbjct: 385 WVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKIQEGQQF 444
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 426
DIR TV EF+ ++MY KPGM+++V+HV R+ +P +VFP G + RPS+ + ++
Sbjct: 445 DIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSRHV--NHQSD 502
Query: 427 ERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMP 465
+ T + D + +++ D +R AK +T P
Sbjct: 503 KNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSP 541
>gi|293335951|ref|NP_001168358.1| uncharacterized protein LOC100382126 [Zea mays]
gi|223947741|gb|ACN27954.1| unknown [Zea mays]
gi|413943856|gb|AFW76505.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 694
Score = 620 bits (1598), Expect = e-175, Method: Compositional matrix adjust.
Identities = 286/459 (62%), Positives = 356/459 (77%), Gaps = 5/459 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
VL G + VHGPGADIDTLCVGP + REEDFF LH +L + +VTEL PVPDAHV
Sbjct: 87 VLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHGILAQTEDVTELQPVPDAHV 146
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE TVRSLNGCRV DQI+RLV
Sbjct: 147 PVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDEATVRSLNGCRVADQIIRLV 206
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P +NFRT LRC+++WAKRRGVYSNV GFLGG+NWALLVAR+CQLYPNAVPSMLVSRFFR
Sbjct: 207 PNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFR 266
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
V+TQW+WPNPV+LC+IEE LG VWDPR+NP+D+ H MPIITPAYPCMNSSYNVSTSTL
Sbjct: 267 VFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSSYNVSTSTL 326
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M+++FQ G+ IC+ +E N+ W LFEPF FFEAYKNYL++DI AE+ +DLR WKG
Sbjct: 327 RVMLEQFQFGNRICQEIEMNK--TSWPALFEPFQFFEAYKNYLQVDIIAEDDEDLRLWKG 384
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C++FMGL RK+GV + EG+QF
Sbjct: 385 WVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKIQEGQQF 444
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 426
DIR TV EF+ ++MY KPGM+++V+HV R+ +P +VFP G + RPS+ + ++
Sbjct: 445 DIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSRHV--NHQSD 502
Query: 427 ERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMP 465
+ T + D + +++ D +R AK +T P
Sbjct: 503 KNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSP 541
>gi|297743180|emb|CBI36047.3| unnamed protein product [Vitis vinifera]
Length = 677
Score = 620 bits (1598), Expect = e-174, Method: Compositional matrix adjust.
Identities = 281/411 (68%), Positives = 336/411 (81%), Gaps = 3/411 (0%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
VL G + VHGPG DIDTLC+GP + +REEDFF LH +L +M EVTEL PVPDAHV
Sbjct: 95 VLFTFGSYRLGVHGPGTDIDTLCIGPSYVSREEDFFFILHNILADMEEVTELQPVPDAHV 154
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L N DE TVRSLNGCRV DQIL+LV
Sbjct: 155 PVMKFKFDGISIDLLYASISLLVVPEDLDISDLSVLYNIDEPTVRSLNGCRVADQILKLV 214
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P +++F TTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR+CQLYPNAVPSMLVSRFFR
Sbjct: 215 PNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFR 274
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LCAIEE LG VWDPR+NP+D+ H MPIITPAYPCMNSSYNVS STL
Sbjct: 275 VYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSISTL 334
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+MM++FQ G++ICE +E + A W LFEP+ FFE+YKNYL++DI A + DDLR WKG
Sbjct: 335 RVMMEQFQYGNKICEGIELSNA--QWGALFEPYLFFESYKNYLQVDIVAVDIDDLRAWKG 392
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESRLRQLTL IER T+ LQCHP+P ++ D SK +C++FMGLQRKQG + EG+QF
Sbjct: 393 WVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCAFFMGLQRKQGEIIQEGQQF 452
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 417
DIR TV EF+ +++MY KPGM+I V+HV R+ +P++VFP G + SRP +
Sbjct: 453 DIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPEGYKRSRPQR 503
>gi|449461393|ref|XP_004148426.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 863
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 282/409 (68%), Positives = 337/409 (82%), Gaps = 4/409 (0%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGPG+DIDTLCVGP + RE DFF LH +L EM EVT+L PVPDAHV
Sbjct: 96 VIFTFGSYRLGVHGPGSDIDTLCVGPSYVNRE-DFFIILHNILAEMEEVTDLQPVPDAHV 154
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVM+FKF G+SIDLLYA +SL V+PEDLDIS S+L N DEQTVRSLNGCRV DQILRLV
Sbjct: 155 PVMRFKFLGISIDLLYASISLLVVPEDLDISHGSVLYNVDEQTVRSLNGCRVADQILRLV 214
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P +++FRTTLRC++FWAKRRGVYSNV GFLGG+NWALLVA++CQLYPNA+PSMLVSRFFR
Sbjct: 215 PNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAQVCQLYPNAIPSMLVSRFFR 274
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LC+IEE LG VWDPRRNP+D++HLMPIITPAYPCMNSSYNVSTSTL
Sbjct: 275 VYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHLMPIITPAYPCMNSSYNVSTSTL 334
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+MM++F+ G+ ICE ++ ++A W LFEP+ FFE YKNYL++DI A +ADDL WKG
Sbjct: 335 RVMMEQFRYGNSICEEIDLSKA--QWSALFEPYLFFETYKNYLQVDIIAADADDLLAWKG 392
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESR RQLTLKIER T MLQCHP+P ++SD SKP +C++FMGLQRK+G+ G+QF
Sbjct: 393 WVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSKPCSHCAFFMGLQRKEGLRGQGGQQF 452
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRP 415
DIR TV EF+Q ++MY KPGM I V+HV R+ LP FVFP G + ++P
Sbjct: 453 DIRGTVDEFRQEINMYAFWKPGMDIYVSHVRRKQLPTFVFPDGHKRAKP 501
>gi|413943853|gb|AFW76502.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 696
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 286/459 (62%), Positives = 356/459 (77%), Gaps = 5/459 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
VL G + VHGPGADIDTLCVGP + REEDFF LH +L + +VTEL PVPDAHV
Sbjct: 87 VLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHGILAQTEDVTELQPVPDAHV 146
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE TVRSLNGCRV DQI+RLV
Sbjct: 147 PVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDEATVRSLNGCRVADQIIRLV 206
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P +NFRT LRC+++WAKRRGVYSNV GFLGG+NWALLVAR+CQLYPNAVPSMLVSRFFR
Sbjct: 207 PNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFR 266
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
V+TQW+WPNPV+LC+IEE LG VWDPR+NP+D+ H MPIITPAYPCMNSSYNVSTSTL
Sbjct: 267 VFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSSYNVSTSTL 326
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M+++FQ G+ IC+ +E N+ W LFEPF FFEAYKNYL++DI AE+ +DLR WKG
Sbjct: 327 RVMLEQFQFGNRICQEIEMNK--TSWPALFEPFQFFEAYKNYLQVDIIAEDDEDLRLWKG 384
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C++FMGL RK+GV + EG+QF
Sbjct: 385 WVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKIQEGQQF 444
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 426
DIR TV EF+ ++MY KPGM+++V+HV R+ +P +VFP G + RPS+ + ++
Sbjct: 445 DIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSRHV--NHQSD 502
Query: 427 ERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMP 465
+ T + D + +++ D +R AK +T P
Sbjct: 503 KNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSP 541
>gi|326505742|dbj|BAJ95542.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 694
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 295/501 (58%), Positives = 365/501 (72%), Gaps = 17/501 (3%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
VL G + VHGPGADIDTLCVGP + REEDFF LH +L + EV++L PVPDAHV
Sbjct: 78 VLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEEVSQLQPVPDAHV 137
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL V+P DLDISQ+++L + DE TVRSL GCRV DQILRLV
Sbjct: 138 PVMKFKFHGISIDLLYASVSLLVVPSDLDISQEAVLYDIDEATVRSLTGCRVADQILRLV 197
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P I++FRTTLRC++ WA+RRGVYSNV GFLGG+NWALLVAR+CQLYPNAVPSMLVSRFFR
Sbjct: 198 PNIESFRTTLRCLKHWARRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFR 257
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
V+TQWRWP PV+LCAIEE LG VWDPR+NP+D+ H MPIITPAYPCMNSSYNVSTSTL
Sbjct: 258 VFTQWRWPTPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTL 317
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M+++FQ G++IC+ +E N+A W LFEPF FFEAYKNYL++DI AE+ +DLR WKG
Sbjct: 318 RVMIEQFQFGNKICQEIEMNKA--SWSALFEPFNFFEAYKNYLQVDIIAEDDEDLRLWKG 375
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESRLRQLTLKIER TY LQCHP+P +++D S+ +C++FMGL RK+GV + EG+QF
Sbjct: 376 WVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSRQCAHCAFFMGLSRKEGVKIQEGQQF 435
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 426
DIR TV EF+ ++MY KPGM+++V+HV R+ +P +VFP G + RP R
Sbjct: 436 DIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKEIPAYVFPEGYKRPRP------QRHVN 489
Query: 427 ERKVSSHTKPG---ADDGRKRKQTDDNVDTHLRNAKCHATMPS--SSGEFREGSPIMSTI 481
+ S PG D KRK +D C + + S G + SP +
Sbjct: 490 HQHQSDKNDPGNGSPDSQLKRKHDSTGIDD---TEPCQSVKRASISPGHPKTSSPRSGNV 546
Query: 482 SSSSINLQFEHMDANELAGSN 502
S I+ + + +N GS
Sbjct: 547 SDEPISNSQQKVTSNASGGSQ 567
>gi|356515639|ref|XP_003526506.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 732
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 302/525 (57%), Positives = 377/525 (71%), Gaps = 12/525 (2%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGPG DIDTLC+GP + REEDFF LH +L EM EV+EL PVPDAHV
Sbjct: 100 VIFTFGSYRLGVHGPGVDIDTLCIGPSYVNREEDFFIILHNILAEMEEVSELQPVPDAHV 159
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L + DE TVRSLNGCRV DQIL+LV
Sbjct: 160 PVMKFKFQGISIDLLYASISLLVVPEDLDISHGSVLYDVDEPTVRSLNGCRVADQILKLV 219
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P +++FRTTLRC++FWAKRRGVYSNV GFLGG+NWA+LVARICQLYPNA+PSMLVSRFFR
Sbjct: 220 PNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWAILVARICQLYPNAIPSMLVSRFFR 279
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LC+IEE LG +WDPRRNP+D++H MPIITPAYPCMNSSYNVS STL
Sbjct: 280 VYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHTMPIITPAYPCMNSSYNVSASTL 339
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M+D+F G++IC+ +E N+A W LF+P+ FFEAYKNYL++DI A + DDL W+G
Sbjct: 340 RVMVDQFCYGNKICDEIELNKA--QWSALFQPYIFFEAYKNYLQVDIIASDTDDLLAWRG 397
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESRLR LTLKIER T MLQCHP+P ++ D SKP + ++FMGLQRK+GV EG+QF
Sbjct: 398 WVESRLRMLTLKIERDTNGMLQCHPYPHEYVDTSKPCAHSAFFMGLQRKEGVRGQEGQQF 457
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR-PSKGTWDSRRA 425
DIR TV EF+Q ++MY KPGM I V+HV R+ LP FVFP G + +R P + +
Sbjct: 458 DIRGTVDEFRQEINMYMYWKPGMDIFVSHVRRKQLPAFVFPDGYKRTRMPRHISHQAEIT 517
Query: 426 LERKVSSHTKPG-ADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMST-ISS 483
+ + ++ PG ++ KRK + VD A++ S SP T S
Sbjct: 518 GDDATNCYSGPGLSERCIKRKNYSEMVDKKPDKPDKRASI--SPQRLECVSPESCTGKSG 575
Query: 484 SSINLQFEHMDANELAGSNREKVENNL----TDSIRGSRNSVEVS 524
+ + E + LAGS + +N +D++ GS EV+
Sbjct: 576 GTAQMSIECIKGVRLAGSTTKDANSNCKIKSSDALPGSGLRTEVA 620
>gi|356507941|ref|XP_003522721.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 651
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 302/537 (56%), Positives = 374/537 (69%), Gaps = 34/537 (6%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGPG DIDTLC+GP + REEDFF LH +L EM EV+EL PVPDAHV
Sbjct: 99 VIFTFGSYRLGVHGPGVDIDTLCIGPSYVNREEDFFVILHNILAEMEEVSELQPVPDAHV 158
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L + DE TVRSLNGCRV DQIL+LV
Sbjct: 159 PVMKFKFQGISIDLLYASISLLVVPEDLDISHGSVLYDVDEPTVRSLNGCRVADQILKLV 218
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P +++FRT LRC++FWAKRRGVYSNV GFLGG+NWA+LVARICQLYPNA+PSMLVSRFFR
Sbjct: 219 PNVEHFRTALRCLKFWAKRRGVYSNVTGFLGGVNWAILVARICQLYPNAIPSMLVSRFFR 278
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LC+IEE LG +WDPRRNP+D++H MPIITPAYPCMNSSYNVS STL
Sbjct: 279 VYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHTMPIITPAYPCMNSSYNVSASTL 338
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+MM++F+ G++IC+ +E N+A W LF+P+ FFEAYKNYL++DI A +ADDL W+G
Sbjct: 339 RVMMEQFRYGNKICDEIELNKA--QWSALFQPYIFFEAYKNYLQVDIIASDADDLLAWRG 396
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESRLR LTLKIER T MLQCHP+P ++ D SK + ++FMGLQRK+GV EG+QF
Sbjct: 397 WVESRLRLLTLKIERDTNGMLQCHPYPNEYVDTSKLCAHSAFFMGLQRKEGVRGQEGQQF 456
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 426
DIR TV EF+Q ++MY KPGM I V+HV R+ LP FVFPGG + +R +
Sbjct: 457 DIRGTVDEFRQEINMYMYWKPGMDIFVSHVRRKQLPAFVFPGGYKRTR-----------M 505
Query: 427 ERKVSSHTKPGADDGR---------------KRKQTDDNVDTHLRNAKCHATMPSSSGEF 471
R +S + DD KRK + VD A++ E
Sbjct: 506 PRHISHQAEKTGDDATKCYSGSGSGSSERCIKRKSCPEMVDKKPGKPDKRASISPQRLEC 565
Query: 472 REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNL----TDSIRGSRNSVEVS 524
S S + + E ++ LAGS + +N +D++ GS S EV+
Sbjct: 566 VSPESCTSK-SGGTTQMSIECIEVVRLAGSTTKDANDNCEVKSSDALPGSGLSTEVA 621
>gi|449480779|ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 758
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 285/438 (65%), Positives = 340/438 (77%), Gaps = 3/438 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGP + REEDFF LH +L EM EV+EL PVPDAHVP
Sbjct: 103 IFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFYMLHNILEEMEEVSELQPVPDAHVP 162
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VMKFKF G+SIDLLYA +S V+PEDLDIS S+L N DE TVRSLNGCRV DQIL+LVP
Sbjct: 163 VMKFKFDGISIDLLYASISCLVVPEDLDISDVSVLYNVDEPTVRSLNGCRVADQILKLVP 222
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+++FRT LRC++FWAKRRGVYSNV GFLGG+NWALLVAR+CQLYPNAVPSML+SRFFRV
Sbjct: 223 NVESFRTALRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLLSRFFRV 282
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
YT WRWPNPV+LCAIEE LG VWDPR+NP+D+ H MPIITPAYPCMNSSYNVSTSTLR
Sbjct: 283 YTLWRWPNPVMLCAIEEDDLGCSVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLR 342
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+MM++FQ G+++CE +E N+A W +LFEP+ FFE+YKNYL++DI A +ADDLR+WKGW
Sbjct: 343 VMMEQFQFGNKVCEEIELNKA--QWSSLFEPYLFFESYKNYLQVDIVAADADDLRSWKGW 400
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQFD 367
VESR R LTL IER T LQCHP+P ++ D SKP +C++FMGLQRKQG + EG+QFD
Sbjct: 401 VESRFRHLTLLIERKTEGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKQGEIIQEGQQFD 460
Query: 368 IRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALE 427
IR +V EFK S Y KPGM+I V+HV RR +P FVFP G + R S+ + R +
Sbjct: 461 IRSSVDEFKHYTSSYMFWKPGMEIFVSHVRRRQIPPFVFPEGHKRFRASRLSALQRSPNQ 520
Query: 428 RKVSSHTKPGADDGRKRK 445
V + + KRK
Sbjct: 521 EDVQNGRSGSCERDLKRK 538
>gi|449515462|ref|XP_004164768.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 544
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 282/411 (68%), Positives = 337/411 (81%), Gaps = 4/411 (0%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V G + VHGPG+DIDTLCVGP + RE DFF LH +L EM EVT+L PVPDAHV
Sbjct: 96 VXFTFGSYRLGVHGPGSDIDTLCVGPSYVNRE-DFFIILHNILAEMEEVTDLQPVPDAHV 154
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVM+FKF G+SIDLLYA +SL V+PEDLDIS S+L N DEQTVRSLNGCRV DQILRLV
Sbjct: 155 PVMRFKFLGISIDLLYASISLLVVPEDLDISHGSVLYNVDEQTVRSLNGCRVADQILRLV 214
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P +++FRTTLRC++FWAKRRGVYSNV GFLGG+NWALLVA++CQLYPNA+PSMLVSRFFR
Sbjct: 215 PNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAQVCQLYPNAIPSMLVSRFFR 274
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LC+IEE LG VWDPRRNP+D++HLMPIITPAYPCMNSSYNVSTSTL
Sbjct: 275 VYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHLMPIITPAYPCMNSSYNVSTSTL 334
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+MM++F+ G+ ICE ++ ++A W LFEP+ FFE YKNYL++DI A +ADDL WKG
Sbjct: 335 RVMMEQFRYGNSICEEIDLSKA--QWSALFEPYLFFETYKNYLQVDIIAADADDLLAWKG 392
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESR RQLTLKIER T MLQCHP+P ++SD SKP +C++FMGLQRK+G+ G+QF
Sbjct: 393 WVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSKPCSHCAFFMGLQRKEGLRGQGGQQF 452
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 417
DIR TV EF+Q ++MY KPGM I V+HV R+ LP FVFP G + ++P +
Sbjct: 453 DIRGTVDEFRQEINMYAFWKPGMDIYVSHVRRKQLPTFVFPDGHKRAKPLR 503
>gi|357513525|ref|XP_003627051.1| Poly(A) polymerase [Medicago truncatula]
gi|355521073|gb|AET01527.1| Poly(A) polymerase [Medicago truncatula]
Length = 633
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 318/605 (52%), Positives = 394/605 (65%), Gaps = 26/605 (4%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V++ G + VHGPGAD+DTLC+GP + REEDFF H +L M EVTEL PVPDAHV
Sbjct: 8 VILTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFFYTFHDILASMDEVTELQPVPDAHV 67
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +S ++PE+LDIS S+L N DE TVRSLNGCRV DQIL+LV
Sbjct: 68 PVMKFKFDGISIDLLYASISCLIVPEELDISDVSVLHNIDEPTVRSLNGCRVADQILKLV 127
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P I+ FRTTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR+CQLYPNAVPSMLVSRFFR
Sbjct: 128 PNIEYFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFR 187
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LC+IEE LG VW P RNP+D+ HLMPIITPAYPCMNSSYNVS STL
Sbjct: 188 VYTQWRWPNPVMLCSIEENELGFSVWHPLRNPRDRSHLMPIITPAYPCMNSSYNVSASTL 247
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+MM++FQ G++ICE +E N+ V W LF P+ FFE YKN+L+ID+ A + DDLR WKG
Sbjct: 248 RVMMEQFQYGNKICEDIELNK--VGWSALFVPYVFFEGYKNFLQIDVVAADVDDLRAWKG 305
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESRLRQLTL IER T LQCHP+P ++ D ++ + ++FMGLQRKQG V EG+QF
Sbjct: 306 WVESRLRQLTLMIERDTIGKLQCHPYPREYIDDTRKCSHSAFFMGLQRKQGEVVQEGQQF 365
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTW----DS 422
DIR TV+ F+ +++MY KPGM I V+H+ RR +P +VFP G + SRPS+ T
Sbjct: 366 DIRGTVEAFRHSINMYMFWKPGMDIHVSHIRRRQIPCYVFPDGFKRSRPSRSTVPVENRP 425
Query: 423 RRALERKVSSHTKPGADDGRKRK----QTDDNVDTHLRNAKCHATMPSSSGEFREGSPIM 478
+ E +VS G + RK + D + H N + P + + +
Sbjct: 426 KSLQENEVSGTELRGRNIKRKYDDKGVKQDVVLKKHCANPFVESLTPGNYA-VSDCQELK 484
Query: 479 STISSSSINLQFEHMD------ANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGKVDG 532
S S+S N + + +D A GSN V + S GS V S G VD
Sbjct: 485 SGESTSLTNSEQDELDRRMSPEAGTECGSNSSGVTS--VSSEDGSPEYVASVSVAGYVDD 542
Query: 533 PMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAKDF 592
F+++ D+ KL I + S Q D L+ LE A F
Sbjct: 543 SARAVEAMNNSRFDTTYMADSVKLGIGTLASANNEVLQ------DTLQTHLEPIAMAGMF 596
Query: 593 AGSTQ 597
ST+
Sbjct: 597 LDSTK 601
>gi|297802710|ref|XP_002869239.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
gi|297315075|gb|EFH45498.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
Length = 748
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 300/517 (58%), Positives = 366/517 (70%), Gaps = 8/517 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGPGADIDTLCVGP + REEDFF LH +L EM EVTELHPVPDAHV
Sbjct: 96 VIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEVTELHPVPDAHV 155
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L + DE TVRSLNGCRV DQIL+LV
Sbjct: 156 PVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCDVDEPTVRSLNGCRVADQILKLV 215
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQLYPNA+PSMLVSRFFR
Sbjct: 216 PNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFR 275
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LCAIEE LG VWDPR+N +D+YHLMPIITPAYPCMNSSYNVS STL
Sbjct: 276 VYTQWRWPNPVMLCAIEEDELGFPVWDPRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTL 335
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++DI A +A+DL WKG
Sbjct: 336 RVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQVDIVAGDAEDLLAWKG 393
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMGLQRKQGVPVGEGEQF 366
WVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMGLQR +GV E +QF
Sbjct: 394 WVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQF 453
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK-GTWDSRRA 425
DIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R R S+ ++
Sbjct: 454 DIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNQPGGKS 513
Query: 426 LERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFR--EGSPIMSTISS 483
E SH+ + KRK + +D + A++ S + E S I + +
Sbjct: 514 GEDGTVSHSGSVVERHAKRKNDSEMMDARPEKPEKRASLSPQSLDIVSPESSAITTGWTP 573
Query: 484 SSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 520
NL+ + E N E E LT+ R NS
Sbjct: 574 PVCNLRRPPSEEIEAENLNTECTE--LTNFARNECNS 608
>gi|42573145|ref|NP_974669.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|186515704|ref|NP_001119102.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|222422953|dbj|BAH19461.1| AT4G32850 [Arabidopsis thaliana]
gi|332660729|gb|AEE86129.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660734|gb|AEE86134.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 300/517 (58%), Positives = 364/517 (70%), Gaps = 8/517 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGPGADIDTLCVGP + REEDFF LH +L EM EVTELHPVPDAHV
Sbjct: 97 VIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEVTELHPVPDAHV 156
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVRSLNGCRV DQIL+LV
Sbjct: 157 PVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNGCRVADQILKLV 216
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQLYPNA+PSMLVSRFFR
Sbjct: 217 PNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFR 276
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPAYPCMNSSYNVS STL
Sbjct: 277 VYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTL 336
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++DI A +A+DL WKG
Sbjct: 337 RVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQVDIVAADAEDLLAWKG 394
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMGLQRKQGVPVGEGEQF 366
WVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMGLQR +GV E +QF
Sbjct: 395 WVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQF 454
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK-GTWDSRRA 425
DIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R R S+ ++
Sbjct: 455 DIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKS 514
Query: 426 LERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFR--EGSPIMSTISS 483
E SH+ + KRK + +D + A++ S + E S I + +
Sbjct: 515 GEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSAITTGWTP 574
Query: 484 SSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 520
NL+ + E N E E LTD R NS
Sbjct: 575 PVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|30689510|ref|NP_849561.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|17978937|gb|AAL47435.1| AT4g32850/T16I18_60 [Arabidopsis thaliana]
gi|23308169|gb|AAN18054.1| At4g32850/T16I18_60 [Arabidopsis thaliana]
gi|332660730|gb|AEE86130.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 741
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 300/517 (58%), Positives = 364/517 (70%), Gaps = 8/517 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGPGADIDTLCVGP + REEDFF LH +L EM EVTELHPVPDAHV
Sbjct: 97 VIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEVTELHPVPDAHV 156
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVRSLNGCRV DQIL+LV
Sbjct: 157 PVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNGCRVADQILKLV 216
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQLYPNA+PSMLVSRFFR
Sbjct: 217 PNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFR 276
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPAYPCMNSSYNVS STL
Sbjct: 277 VYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTL 336
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++DI A +A+DL WKG
Sbjct: 337 RVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQVDIVAADAEDLLAWKG 394
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMGLQRKQGVPVGEGEQF 366
WVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMGLQR +GV E +QF
Sbjct: 395 WVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQF 454
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK-GTWDSRRA 425
DIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R R S+ ++
Sbjct: 455 DIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKS 514
Query: 426 LERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFR--EGSPIMSTISS 483
E SH+ + KRK + +D + A++ S + E S I + +
Sbjct: 515 GEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSAITTGWTP 574
Query: 484 SSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 520
NL+ + E N E E LTD R NS
Sbjct: 575 PVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|42570181|ref|NP_849562.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|79610218|ref|NP_974670.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660726|gb|AEE86126.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660728|gb|AEE86128.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 738
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 300/517 (58%), Positives = 364/517 (70%), Gaps = 8/517 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGPGADIDTLCVGP + REEDFF LH +L EM EVTELHPVPDAHV
Sbjct: 97 VIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEVTELHPVPDAHV 156
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVRSLNGCRV DQIL+LV
Sbjct: 157 PVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNGCRVADQILKLV 216
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQLYPNA+PSMLVSRFFR
Sbjct: 217 PNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFR 276
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPAYPCMNSSYNVS STL
Sbjct: 277 VYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTL 336
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++DI A +A+DL WKG
Sbjct: 337 RVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQVDIVAADAEDLLAWKG 394
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMGLQRKQGVPVGEGEQF 366
WVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMGLQR +GV E +QF
Sbjct: 395 WVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQF 454
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK-GTWDSRRA 425
DIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R R S+ ++
Sbjct: 455 DIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKS 514
Query: 426 LERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFR--EGSPIMSTISS 483
E SH+ + KRK + +D + A++ S + E S I + +
Sbjct: 515 GEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSAITTGWTP 574
Query: 484 SSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 520
NL+ + E N E E LTD R NS
Sbjct: 575 PVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|32527646|gb|AAP86216.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 737
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 300/517 (58%), Positives = 364/517 (70%), Gaps = 8/517 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGPGADIDTLCVGP + REEDFF LH +L EM EVTELHPVPDAHV
Sbjct: 96 VIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEVTELHPVPDAHV 155
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVRSLNGCRV DQIL+LV
Sbjct: 156 PVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNGCRVADQILKLV 215
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQLYPNA+PSMLVSRFFR
Sbjct: 216 PNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFR 275
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPAYPCMNSSYNVS STL
Sbjct: 276 VYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTL 335
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++DI A +A+DL WKG
Sbjct: 336 RVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQVDIVAADAEDLLAWKG 393
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMGLQRKQGVPVGEGEQF 366
WVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMGLQR +GV E +QF
Sbjct: 394 WVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQF 453
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK-GTWDSRRA 425
DIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R R S+ ++
Sbjct: 454 DIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKS 513
Query: 426 LERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFR--EGSPIMSTISS 483
E SH+ + KRK + +D + A++ S + E S I + +
Sbjct: 514 GEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSAITTGWTP 573
Query: 484 SSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 520
NL+ + E N E E LTD R NS
Sbjct: 574 PVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 608
>gi|186515708|ref|NP_001119103.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|227202692|dbj|BAH56819.1| AT4G32850 [Arabidopsis thaliana]
gi|332660735|gb|AEE86135.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 300/517 (58%), Positives = 364/517 (70%), Gaps = 8/517 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGPGADIDTLCVGP + REEDFF LH +L EM EVTELHPVPDAHV
Sbjct: 97 VIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEVTELHPVPDAHV 156
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVRSLNGCRV DQIL+LV
Sbjct: 157 PVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNGCRVADQILKLV 216
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQLYPNA+PSMLVSRFFR
Sbjct: 217 PNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFR 276
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPAYPCMNSSYNVS STL
Sbjct: 277 VYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTL 336
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++DI A +A+DL WKG
Sbjct: 337 RVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQVDIVAADAEDLLAWKG 394
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMGLQRKQGVPVGEGEQF 366
WVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMGLQR +GV E +QF
Sbjct: 395 WVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQF 454
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK-GTWDSRRA 425
DIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R R S+ ++
Sbjct: 455 DIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKS 514
Query: 426 LERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFR--EGSPIMSTISS 483
E SH+ + KRK + +D + A++ S + E S I + +
Sbjct: 515 GEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSAITTGWTP 574
Query: 484 SSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 520
NL+ + E N E E LTD R NS
Sbjct: 575 PVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|42567333|ref|NP_195011.4| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660727|gb|AEE86127.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 735
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 300/517 (58%), Positives = 364/517 (70%), Gaps = 8/517 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGPGADIDTLCVGP + REEDFF LH +L EM EVTELHPVPDAHV
Sbjct: 97 VIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEVTELHPVPDAHV 156
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVRSLNGCRV DQIL+LV
Sbjct: 157 PVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNGCRVADQILKLV 216
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQLYPNA+PSMLVSRFFR
Sbjct: 217 PNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFR 276
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPAYPCMNSSYNVS STL
Sbjct: 277 VYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTL 336
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++DI A +A+DL WKG
Sbjct: 337 RVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQVDIVAADAEDLLAWKG 394
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMGLQRKQGVPVGEGEQF 366
WVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMGLQR +GV E +QF
Sbjct: 395 WVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQF 454
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK-GTWDSRRA 425
DIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R R S+ ++
Sbjct: 455 DIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKS 514
Query: 426 LERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFR--EGSPIMSTISS 483
E SH+ + KRK + +D + A++ S + E S I + +
Sbjct: 515 GEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSAITTGWTP 574
Query: 484 SSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 520
NL+ + E N E E LTD R NS
Sbjct: 575 PVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|79326212|ref|NP_001031779.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660733|gb|AEE86133.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 765
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 300/517 (58%), Positives = 364/517 (70%), Gaps = 8/517 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGPGADIDTLCVGP + REEDFF LH +L EM EVTELHPVPDAHV
Sbjct: 97 VIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEVTELHPVPDAHV 156
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVRSLNGCRV DQIL+LV
Sbjct: 157 PVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNGCRVADQILKLV 216
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQLYPNA+PSMLVSRFFR
Sbjct: 217 PNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFR 276
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPAYPCMNSSYNVS STL
Sbjct: 277 VYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTL 336
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++DI A +A+DL WKG
Sbjct: 337 RVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQVDIVAADAEDLLAWKG 394
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMGLQRKQGVPVGEGEQF 366
WVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMGLQR +GV E +QF
Sbjct: 395 WVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQF 454
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK-GTWDSRRA 425
DIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R R S+ ++
Sbjct: 455 DIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKS 514
Query: 426 LERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFR--EGSPIMSTISS 483
E SH+ + KRK + +D + A++ S + E S I + +
Sbjct: 515 GEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSAITTGWTP 574
Query: 484 SSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 520
NL+ + E N E E LTD R NS
Sbjct: 575 PVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|42573143|ref|NP_974668.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660731|gb|AEE86131.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 730
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 300/517 (58%), Positives = 364/517 (70%), Gaps = 8/517 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGPGADIDTLCVGP + REEDFF LH +L EM EVTELHPVPDAHV
Sbjct: 97 VIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEVTELHPVPDAHV 156
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVRSLNGCRV DQIL+LV
Sbjct: 157 PVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNGCRVADQILKLV 216
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQLYPNA+PSMLVSRFFR
Sbjct: 217 PNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFR 276
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPAYPCMNSSYNVS STL
Sbjct: 277 VYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTL 336
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++DI A +A+DL WKG
Sbjct: 337 RVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQVDIVAADAEDLLAWKG 394
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMGLQRKQGVPVGEGEQF 366
WVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMGLQR +GV E +QF
Sbjct: 395 WVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQF 454
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK-GTWDSRRA 425
DIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R R S+ ++
Sbjct: 455 DIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKS 514
Query: 426 LERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFR--EGSPIMSTISS 483
E SH+ + KRK + +D + A++ S + E S I + +
Sbjct: 515 GEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSAITTGWTP 574
Query: 484 SSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 520
NL+ + E N E E LTD R NS
Sbjct: 575 PVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|7270232|emb|CAB80002.1| putative poly(A) polymerase [Arabidopsis thaliana]
Length = 729
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 300/517 (58%), Positives = 364/517 (70%), Gaps = 8/517 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGPGADIDTLCVGP + REEDFF LH +L EM EVTELHPVPDAHV
Sbjct: 96 VIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEVTELHPVPDAHV 155
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVRSLNGCRV DQIL+LV
Sbjct: 156 PVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNGCRVADQILKLV 215
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQLYPNA+PSMLVSRFFR
Sbjct: 216 PNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFR 275
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPAYPCMNSSYNVS STL
Sbjct: 276 VYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTL 335
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++DI A +A+DL WKG
Sbjct: 336 RVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQVDIVAADAEDLLAWKG 393
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMGLQRKQGVPVGEGEQF 366
WVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMGLQR +GV E +QF
Sbjct: 394 WVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQF 453
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK-GTWDSRRA 425
DIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R R S+ ++
Sbjct: 454 DIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKS 513
Query: 426 LERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFR--EGSPIMSTISS 483
E SH+ + KRK + +D + A++ S + E S I + +
Sbjct: 514 GEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSAITTGWTP 573
Query: 484 SSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 520
NL+ + E N E E LTD R NS
Sbjct: 574 PVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 608
>gi|79326203|ref|NP_001031778.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660732|gb|AEE86132.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 716
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 300/517 (58%), Positives = 364/517 (70%), Gaps = 8/517 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGPGADIDTLCVGP + REEDFF LH +L EM EVTELHPVPDAHV
Sbjct: 97 VIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEVTELHPVPDAHV 156
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVRSLNGCRV DQIL+LV
Sbjct: 157 PVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNGCRVADQILKLV 216
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQLYPNA+PSMLVSRFFR
Sbjct: 217 PNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFR 276
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPAYPCMNSSYNVS STL
Sbjct: 277 VYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTL 336
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++DI A +A+DL WKG
Sbjct: 337 RVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQVDIVAADAEDLLAWKG 394
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMGLQRKQGVPVGEGEQF 366
WVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMGLQR +GV E +QF
Sbjct: 395 WVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQF 454
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK-GTWDSRRA 425
DIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R R S+ ++
Sbjct: 455 DIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKS 514
Query: 426 LERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFR--EGSPIMSTISS 483
E SH+ + KRK + +D + A++ S + E S I + +
Sbjct: 515 GEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSAITTGWTP 574
Query: 484 SSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 520
NL+ + E N E E LTD R NS
Sbjct: 575 PVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|413926072|gb|AFW66004.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 680
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 289/541 (53%), Positives = 376/541 (69%), Gaps = 13/541 (2%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
+L G + VHGPGADIDTLCVGP + REEDFF LH +L E EV EL PVPDAHV
Sbjct: 96 ILFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFVTLHGILAEKEEVAELQPVPDAHV 155
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PV+KFKF G+SIDLLYA +SL VIP D DISQ S+L + DE TVRSLNGCRV DQILRLV
Sbjct: 156 PVLKFKFRGISIDLLYASISLSVIPADFDISQGSVLCDVDEATVRSLNGCRVADQILRLV 215
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++NFRTTLRC+++WAKRRGVYSN+ GFLGG+NWALLVAR+CQLYPNAVPSMLVSRFFR
Sbjct: 216 PNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFR 275
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
V+TQW+WPNPV+LCAIE LG +WDPR+NP+D+ HLMPIITPAYPCMNSSYNVSTSTL
Sbjct: 276 VFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPIITPAYPCMNSSYNVSTSTL 335
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R++M++FQ G+++C+ +E N+A +W+ LFEPF FFEAY+ +L +DI AE+ DDLR WKG
Sbjct: 336 RVIMEQFQFGNKVCQEIELNKA--NWNALFEPFHFFEAYRKFLVVDIVAEDDDDLRLWKG 393
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCSYFMGLQRKQGVPVGEGEQF 366
W+ESRLRQLTLKIER T +LQCHP+P ++SD + + +C+++MGL RK+G+ G+QF
Sbjct: 394 WIESRLRQLTLKIERDTKGILQCHPYPCEYSDPTIECAHCAFYMGLSRKEGLK-KRGQQF 452
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 426
DIR TV EF + + MY+L KPGM ++V HV R +P++VF G + P T + +
Sbjct: 453 DIRGTVDEFMREIGMYSLWKPGMDLAVTHVHREQVPSYVFEQGYKKPCP---TMHANQQE 509
Query: 427 ERKVSSHTKPGADDGRKRKQTDD---NVDTHLRNAKCHATMPSSSGEFREGSPIMSTISS 483
+ P + KRK D +VD + + P G+ + + +
Sbjct: 510 QSDGDGTFSPYLESQLKRKYISDGDGHVDLCKSVKRASVSPPGVGTPPHLGNSVSNVVCD 569
Query: 484 SSINLQFEHMDANELAGSNREKV---ENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRN 540
S + + + A S+ + + + LT S GS ++ + V ++ D +
Sbjct: 570 SPVKFVSSVVCSGAHASSSHDDINIEQAQLTTSPYGSEDTSASGTSCAAVGAVILADESS 629
Query: 541 K 541
K
Sbjct: 630 K 630
>gi|167998971|ref|XP_001752191.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696586|gb|EDQ82924.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 553
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 277/412 (67%), Positives = 330/412 (80%), Gaps = 4/412 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGP + TREEDFF ELH +L + VTELH VPDAHVP
Sbjct: 84 IFTFGSYRLGVHGPGADIDTLCVGPCYVTREEDFFVELHDLLQKTEGVTELHTVPDAHVP 143
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VM F+F+G+ IDLLYARL LWVIPE+LDI QD+ILQN DEQ+VRSLNGCRVTD+ILRLVP
Sbjct: 144 VMSFEFNGIPIDLLYARLPLWVIPEELDILQDTILQNVDEQSVRSLNGCRVTDRILRLVP 203
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+++FRTTLR ++ WAKRRGVYSNV GFLGG+NWALLVARICQLYPNAVPS+L+SRFFRV
Sbjct: 204 NMEHFRTTLRYVKLWAKRRGVYSNVIGFLGGVNWALLVARICQLYPNAVPSVLLSRFFRV 263
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y QWRWPNPV+LCAIEEG LGL VWDPRRNP+D+ HLMPIITP YPC NSS+NVS STLR
Sbjct: 264 YKQWRWPNPVMLCAIEEGPLGLPVWDPRRNPRDRSHLMPIITPTYPCQNSSFNVSNSTLR 323
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M +EF+RG IC++++ A DW LFEP+ FFE+YKNYL+IDISA + +DLR WKGW
Sbjct: 324 VMTEEFKRGDSICDSLDSKVA--DWSKLFEPYPFFESYKNYLQIDISAGDEEDLRIWKGW 381
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQFD 367
VESRLRQL LK+E+ T+ LQCHPHP F D SK + CS+F+ LQRKQG P FD
Sbjct: 382 VESRLRQLILKVEKDTFGALQCHPHPSAFHDTSKRVQVCSFFVALQRKQGAP-PSSTPFD 440
Query: 368 IRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 419
+ T+ EFK +V+ Y L KP M+I V+HV + +P +VFP G+RP RP + T
Sbjct: 441 MCHTIAEFKHSVNQYLLWKPTMKIHVSHVRPKQIPTYVFPNGIRPVRPPRPT 492
>gi|297825665|ref|XP_002880715.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326554|gb|EFH56974.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 788
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 287/477 (60%), Positives = 344/477 (72%), Gaps = 5/477 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGP ADIDTLCVGP + REEDFF L ML EM EVTEL PV DAHV
Sbjct: 100 VIFTFGSYRLGVHGPRADIDTLCVGPSYVNREEDFFIILRDMLAEMEEVTELQPVTDAHV 159
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL VIP+DLDIS S+L + DEQTVRSLNGCRV DQIL+LV
Sbjct: 160 PVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVRSLNGCRVADQILKLV 219
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQLYPNA+PSMLVSRFFR
Sbjct: 220 PNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQLYPNAIPSMLVSRFFR 279
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VY QWRWPNPV+LC IEE L VWDPR+N +D+YHLMPIITPAYPCMNSSYNVS STL
Sbjct: 280 VYIQWRWPNPVMLCTIEEDELSFPVWDPRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTL 339
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M ++FQ G+ IC+ +E N+ W +LFE + FFEAYKNYL++D+ A +A+DL WKG
Sbjct: 340 RVMTEQFQFGNTICQEIELNKQ--QWSSLFEQYMFFEAYKNYLQVDVLALDAEDLLAWKG 397
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESR RQLTLKIER T ML CHP P ++ D SK +C++FMGLQR +G E +QF
Sbjct: 398 WVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKKFRHCAFFMGLQRAEGFGGQECQQF 457
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 426
DIR TV EF+Q V+MY +PGM + V+HV RR LP+FVFP G + R S+ R
Sbjct: 458 DIRGTVDEFRQEVNMYMFWRPGMDVYVSHVRRRQLPSFVFPKGYKRPRQSRHQNQQCREP 517
Query: 427 ERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISS 483
V D KRK ++ +DT R K S SP+ S I++
Sbjct: 518 GEGVVGSLSDSVDGYAKRKNDNETMDT--RPEKREKRASRSPHSLDAVSPVSSGITT 572
>gi|449448062|ref|XP_004141785.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 772
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 283/453 (62%), Positives = 336/453 (74%), Gaps = 17/453 (3%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGPGADIDTLCVGP + REEDFF LH +L EM EV+EL PVPDAHV
Sbjct: 102 VIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFYMLHNILEEMEEVSELQPVPDAHV 161
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +S V+PEDLDIS S+L N DE TVRSLNGCRV DQIL+LV
Sbjct: 162 PVMKFKFDGISIDLLYASISCLVVPEDLDISDVSVLYNVDEPTVRSLNGCRVADQILKLV 221
Query: 128 PKIQNFRT--------------TLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 173
P + LRC++FWAKRRGVYSNV GFLGG+NWALLVAR+CQLY
Sbjct: 222 PFFFFVKFFHPNIPVWKLXSPFALRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLY 281
Query: 174 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY 233
PNAVPSML+SRFFRVYT WRWPNPV+LCAIEE LG VWDPR+NP+D+ H MPIITPAY
Sbjct: 282 PNAVPSMLLSRFFRVYTLWRWPNPVMLCAIEEDDLGCSVWDPRKNPRDRTHHMPIITPAY 341
Query: 234 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 293
PCMNSSYNVSTSTLR+MM++FQ G+++CE +E N+A W +LFEP+ FFE+YKNYL++D
Sbjct: 342 PCMNSSYNVSTSTLRVMMEQFQFGNKVCEEIELNKA--QWSSLFEPYLFFESYKNYLQVD 399
Query: 294 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGL 352
I A +ADDLR+WKGWVESR R LTL IER T LQCHP+P ++ D SKP +C++FMGL
Sbjct: 400 IVAADADDLRSWKGWVESRFRHLTLLIERKTEGKLQCHPYPHEYVDTSKPCAHCAFFMGL 459
Query: 353 QRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRP 412
QRKQG + EG+QFDIR +V EFK S Y KPGM+I V+HV RR +P FVFP G +
Sbjct: 460 QRKQGEIIQEGQQFDIRSSVDEFKHYTSSYMFWKPGMEIFVSHVRRRQIPPFVFPEGHKR 519
Query: 413 SRPSKGTWDSRRALERKVSSHTKPGADDGRKRK 445
R S+ + R + V + + KRK
Sbjct: 520 FRASRLSALQRSPNQEDVQNGRSGSCERDLKRK 552
>gi|334184470|ref|NP_001189603.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252670|gb|AEC07764.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 797
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/484 (58%), Positives = 347/484 (71%), Gaps = 12/484 (2%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGP ADIDTLCVGP + REEDFF +L EM EVTEL PV DAHV
Sbjct: 99 VIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAEMEEVTELQPVTDAHV 158
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL VIP+DLDIS S+L + DEQTVRSLNGCRV DQIL+LV
Sbjct: 159 PVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVRSLNGCRVADQILKLV 218
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQ YPNA+PSMLVSRFFR
Sbjct: 219 PNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQFYPNAIPSMLVSRFFR 278
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LCAIEE L VWDPR+N +D+YHLMPIITPAYPCMNSSYNVS STL
Sbjct: 279 VYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTL 338
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M ++FQ G+ IC+ +E N+ W +LF+ + FFEAYKNYL++D+ A +A+DL WKG
Sbjct: 339 RVMTEQFQFGNTICQEIELNKQ--HWSSLFQQYMFFEAYKNYLQVDVLAADAEDLLAWKG 396
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESR RQLTLKIER T ML CHP P ++ D SK +C++FMGLQR G E +QF
Sbjct: 397 WVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQRADGFGGQECQQF 456
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 426
DIR TV EF+Q V+MY +PGM + V+HV RR LP+FVFP G + SR S+ R
Sbjct: 457 DIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQSRHQSQQCREP 516
Query: 427 ERKVSSHTKPGADDGRKRKQTDDNVDT----HLRNAKCH-----ATMPSSSGEFREGSPI 477
+ + KRK D+ +++ + A C A P SSG G+P
Sbjct: 517 GDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAASPDSSGITTSGTPQ 576
Query: 478 MSTI 481
+ +
Sbjct: 577 IGIV 580
>gi|30682917|ref|NP_850071.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252668|gb|AEC07762.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 787
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/484 (58%), Positives = 347/484 (71%), Gaps = 12/484 (2%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGP ADIDTLCVGP + REEDFF +L EM EVTEL PV DAHV
Sbjct: 99 VIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAEMEEVTELQPVTDAHV 158
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL VIP+DLDIS S+L + DEQTVRSLNGCRV DQIL+LV
Sbjct: 159 PVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVRSLNGCRVADQILKLV 218
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQ YPNA+PSMLVSRFFR
Sbjct: 219 PNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQFYPNAIPSMLVSRFFR 278
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LCAIEE L VWDPR+N +D+YHLMPIITPAYPCMNSSYNVS STL
Sbjct: 279 VYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTL 338
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M ++FQ G+ IC+ +E N+ W +LF+ + FFEAYKNYL++D+ A +A+DL WKG
Sbjct: 339 RVMTEQFQFGNTICQEIELNKQ--HWSSLFQQYMFFEAYKNYLQVDVLAADAEDLLAWKG 396
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESR RQLTLKIER T ML CHP P ++ D SK +C++FMGLQR G E +QF
Sbjct: 397 WVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQRADGFGGQECQQF 456
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 426
DIR TV EF+Q V+MY +PGM + V+HV RR LP+FVFP G + SR S+ R
Sbjct: 457 DIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQSRHQSQQCREP 516
Query: 427 ERKVSSHTKPGADDGRKRKQTDDNVDT----HLRNAKCH-----ATMPSSSGEFREGSPI 477
+ + KRK D+ +++ + A C A P SSG G+P
Sbjct: 517 GDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAASPDSSGITTSGTPQ 576
Query: 478 MSTI 481
+ +
Sbjct: 577 IGIV 580
>gi|79323064|ref|NP_001031417.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252669|gb|AEC07763.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 786
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/484 (58%), Positives = 347/484 (71%), Gaps = 12/484 (2%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGP ADIDTLCVGP + REEDFF +L EM EVTEL PV DAHV
Sbjct: 99 VIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAEMEEVTELQPVTDAHV 158
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL VIP+DLDIS S+L + DEQTVRSLNGCRV DQIL+LV
Sbjct: 159 PVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVRSLNGCRVADQILKLV 218
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQ YPNA+PSMLVSRFFR
Sbjct: 219 PNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQFYPNAIPSMLVSRFFR 278
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LCAIEE L VWDPR+N +D+YHLMPIITPAYPCMNSSYNVS STL
Sbjct: 279 VYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTL 338
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M ++FQ G+ IC+ +E N+ W +LF+ + FFEAYKNYL++D+ A +A+DL WKG
Sbjct: 339 RVMTEQFQFGNTICQEIELNKQ--HWSSLFQQYMFFEAYKNYLQVDVLAADAEDLLAWKG 396
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESR RQLTLKIER T ML CHP P ++ D SK +C++FMGLQR G E +QF
Sbjct: 397 WVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQRADGFGGQECQQF 456
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 426
DIR TV EF+Q V+MY +PGM + V+HV RR LP+FVFP G + SR S+ R
Sbjct: 457 DIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQSRHQSQQCREP 516
Query: 427 ERKVSSHTKPGADDGRKRKQTDDNVDT----HLRNAKCH-----ATMPSSSGEFREGSPI 477
+ + KRK D+ +++ + A C A P SSG G+P
Sbjct: 517 GDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAASPDSSGITTSGTPQ 576
Query: 478 MSTI 481
+ +
Sbjct: 577 IGIV 580
>gi|18400958|ref|NP_565611.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|31747891|gb|AAF66438.2|AF255297_1 nuclear poly(A) polymerase [Arabidopsis thaliana]
gi|14532700|gb|AAK64151.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|18491197|gb|AAL69501.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|20197361|gb|AAC42245.2| putative poly(A) polymerase [Arabidopsis thaliana]
gi|330252667|gb|AEC07761.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 800
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/484 (58%), Positives = 347/484 (71%), Gaps = 12/484 (2%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGP ADIDTLCVGP + REEDFF +L EM EVTEL PV DAHV
Sbjct: 99 VIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAEMEEVTELQPVTDAHV 158
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL VIP+DLDIS S+L + DEQTVRSLNGCRV DQIL+LV
Sbjct: 159 PVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVRSLNGCRVADQILKLV 218
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQ YPNA+PSMLVSRFFR
Sbjct: 219 PNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQFYPNAIPSMLVSRFFR 278
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWPNPV+LCAIEE L VWDPR+N +D+YHLMPIITPAYPCMNSSYNVS STL
Sbjct: 279 VYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTL 338
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M ++FQ G+ IC+ +E N+ W +LF+ + FFEAYKNYL++D+ A +A+DL WKG
Sbjct: 339 RVMTEQFQFGNTICQEIELNKQ--HWSSLFQQYMFFEAYKNYLQVDVLAADAEDLLAWKG 396
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESR RQLTLKIER T ML CHP P ++ D SK +C++FMGLQR G E +QF
Sbjct: 397 WVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQRADGFGGQECQQF 456
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 426
DIR TV EF+Q V+MY +PGM + V+HV RR LP+FVFP G + SR S+ R
Sbjct: 457 DIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQSRHQSQQCREP 516
Query: 427 ERKVSSHTKPGADDGRKRKQTDDNVDT----HLRNAKCH-----ATMPSSSGEFREGSPI 477
+ + KRK D+ +++ + A C A P SSG G+P
Sbjct: 517 GDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAASPDSSGITTSGTPQ 576
Query: 478 MSTI 481
+ +
Sbjct: 577 IGIV 580
>gi|242061050|ref|XP_002451814.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
gi|241931645|gb|EES04790.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
Length = 672
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 291/541 (53%), Positives = 376/541 (69%), Gaps = 14/541 (2%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
VL G + VHGP ADIDTLCVGP + REEDFF LH +L E EVTEL PVPDAHV
Sbjct: 96 VLFTFGSYRLGVHGPEADIDTLCVGPSYVNREEDFFVTLHGILAEKEEVTELQPVPDAHV 155
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PV+KFKF G+SIDLLYA LSL VIP D DISQ S+L + DE TVRSLNGCRV DQILRLV
Sbjct: 156 PVLKFKFRGISIDLLYASLSLSVIPADFDISQGSVLCDVDEATVRSLNGCRVADQILRLV 215
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++NFRTTLRC+++WAKRRGVYSN+ GFLGG+NWALLVAR+CQLYPNAVPSMLVSRFFR
Sbjct: 216 PNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFR 275
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
V+TQW+WPNPV+LCAIE LG +WDPR+NP+D+ HLMPIITPAYPCMNSSYNVS+STL
Sbjct: 276 VFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPIITPAYPCMNSSYNVSSSTL 335
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R++M++FQ G++IC+ +E N+A +W+ LFEPF FFEAY+ +L +DI AEN DDLR WKG
Sbjct: 336 RVIMEQFQFGNKICQEIELNKA--NWNALFEPFHFFEAYRKFLVVDIVAENDDDLRLWKG 393
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCSYFMGLQRKQGVPVGEGEQF 366
W+ESRLRQLTLKI+R T +LQCHP+P ++SD + + +C+++MGL RK+G G+QF
Sbjct: 394 WIESRLRQLTLKIDRDTKGILQCHPYPCEYSDPTIECAHCAFYMGLSRKEGSK-KRGQQF 452
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 426
DIR TV EF + + MY+L PGM ++V HV R +P++VF G + P T + +
Sbjct: 453 DIRGTVDEFMREIGMYSLWMPGMDLAVTHVQREQVPSYVFEQGYKKPCP---TMHANQQE 509
Query: 427 ERKVSSHTKPGADDGRKRKQTDD---NVDTHLRNAKCHATMPSSSGEFREGSPIMSTISS 483
+ P D KRK D +V+ H ++ K + P G G+ + + +
Sbjct: 510 QSDGDVTLSPYLDSQLKRKYDSDGDGHVELH-KSVKWASVSPPGVGTPPHGNSVSNVVCD 568
Query: 484 SSINLQFEHMDANELAGSNREKV---ENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRN 540
S + + + + + + + LT S GS ++ + V ++ D +
Sbjct: 569 SPVKFVSSVVCSRAQTSPSHDDINLEQAQLTTSPYGSEDTSASGTSFAAVGAVVLADESS 628
Query: 541 K 541
K
Sbjct: 629 K 629
>gi|168067163|ref|XP_001785494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662901|gb|EDQ49701.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 494
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 274/410 (66%), Positives = 330/410 (80%), Gaps = 4/410 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCVGP + TREEDFF ELH +L + VTELH VPDAHVP
Sbjct: 88 IFTFGSYRLGVHGPGADIDTLCVGPCYVTREEDFFVELHDLLQKTDGVTELHTVPDAHVP 147
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VM F+F+G+ IDLLYARL LWVIPE+LDI QDSILQN DEQ+VRSLNGCRVTD+ILRLVP
Sbjct: 148 VMSFEFNGIPIDLLYARLPLWVIPEELDILQDSILQNVDEQSVRSLNGCRVTDRILRLVP 207
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I++FRTTLR ++ WAKRRGVYSNV GFLGG+NWALLVARICQLYPNAVPS+L+SRFFRV
Sbjct: 208 NIEHFRTTLRYVKLWAKRRGVYSNVIGFLGGVNWALLVARICQLYPNAVPSVLLSRFFRV 267
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y QWRWPNPV+LCAIEEGSLGL +WDPR+NP+D+ HLMPIITP YPC NSS+NVS STLR
Sbjct: 268 YKQWRWPNPVMLCAIEEGSLGLPIWDPRKNPRDRSHLMPIITPTYPCQNSSFNVSNSTLR 327
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M +EF+RG +C++++ A DW LFEP+ FFE+YKNYL+I+I+A + +DLR WKGW
Sbjct: 328 VMTEEFKRGDGVCDSLDSKVA--DWSKLFEPYPFFESYKNYLQIEITAGDEEDLRIWKGW 385
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQFD 367
VESRLRQL LK+E+ T+ MLQCHPHP F D SK + CS+F+ LQRKQG FD
Sbjct: 386 VESRLRQLILKVEKDTFGMLQCHPHPNAFHDTSKKVQVCSFFVALQRKQGAQ-HSSTPFD 444
Query: 368 IRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 417
+ T+ EFK +V+ Y L KP M+I V+HV + +P +VFP G+RP RP +
Sbjct: 445 MCHTIAEFKHSVNQYLLWKPTMKIGVSHVRPKQIPTYVFPNGIRPVRPPR 494
>gi|356522230|ref|XP_003529750.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 766
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 298/526 (56%), Positives = 379/526 (72%), Gaps = 17/526 (3%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
+++ G + VHGPGAD+DTLC+GP + TREEDFF LH +L + EVTEL P+PDAHV
Sbjct: 90 IILTFGSYRLGVHGPGADLDTLCIGPSYVTREEDFFYTLHDILANVEEVTELQPIPDAHV 149
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +S V+PEDLDIS S+L N DE TVRSLNGCRV DQIL+LV
Sbjct: 150 PVMKFKFDGISIDLLYASISRLVLPEDLDISDVSVLHNVDEPTVRSLNGCRVADQILKLV 209
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P I++FRTTLRC++FWAKRRG+YSNV GFLGG+N ALLVAR+CQ YPNAVPSMLVSRFFR
Sbjct: 210 PNIEHFRTTLRCLKFWAKRRGIYSNVTGFLGGVNLALLVARVCQFYPNAVPSMLVSRFFR 269
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWP PV+LC IEE LG VW P +NP+D+ H MPIITPAYPCMNSSYNVSTSTL
Sbjct: 270 VYTQWRWPTPVMLCPIEENELGFPVWHPGKNPRDRSHHMPIITPAYPCMNSSYNVSTSTL 329
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+MMD+FQ G++IC +E + A W LFE ++FFE+YKNYL++D+ A +ADDLR+WKG
Sbjct: 330 RVMMDQFQYGNKICGEIELSRA--CWKALFEQYSFFESYKNYLQVDVVAADADDLRSWKG 387
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESRLRQLTL IER T+ LQCHP+ +F D S+ +C++FMGLQRKQG V EG+QF
Sbjct: 388 WVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTSRLCAHCAFFMGLQRKQGEVVQEGQQF 447
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 426
DIR TV+EF+ +V+MY KPGM+I V+HV RR +P +V P G + SR S+ T +
Sbjct: 448 DIRGTVEEFRHSVNMYMFWKPGMEIYVSHVRRRQIPFYVVPDGYKRSRLSRPT----SQV 503
Query: 427 ERKVSSHTKPGADDG----RKRKQTDDNVDTHLRN-AKCHATMPSSSGEFREGSPIMSTI 481
E S H + + RKRK +D VD K + PS R S +
Sbjct: 504 ENCKSFHNEVSGTEHVERIRKRK-NNDGVDVRGDAIVKRQSASPSEDRLARHSSLGTGGL 562
Query: 482 SSSSIN--LQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSS 525
S +++ + +++ N L+ S +++++ T+S + NS ++S
Sbjct: 563 SVEAVSDRQELRNVECNHLSNSGQDELDR--TESPEAASNSSVITS 606
>gi|356528904|ref|XP_003533037.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 790
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 268/413 (64%), Positives = 330/413 (79%), Gaps = 3/413 (0%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V++ G + VHGPGAD+DTLC+GP + REEDFF LH +L + EVTEL P+PDAHV
Sbjct: 90 VILTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFFYTLHDILANIEEVTELQPIPDAHV 149
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +S ++PEDLDIS S+L N DE TVRSLNGCRV DQIL+LV
Sbjct: 150 PVMKFKFDGISIDLLYASISRLIVPEDLDISDVSVLHNVDEPTVRSLNGCRVADQILKLV 209
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P +++FRTTLRC++FWAKRRG+YSNV GFLGG+N ALLVAR+CQ YP AVPSMLVSRFFR
Sbjct: 210 PNVEHFRTTLRCLKFWAKRRGIYSNVTGFLGGVNLALLVARVCQFYPKAVPSMLVSRFFR 269
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQWRWP PV+LC IEE LG VW P +NP+D+ H MPIITPAYPCMNSSYNVS STL
Sbjct: 270 VYTQWRWPTPVMLCPIEENDLGFPVWHPGKNPRDRSHHMPIITPAYPCMNSSYNVSMSTL 329
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+MM++FQ G++IC +E ++ W LFE ++FFE+YKNYL++D+ A +ADDLR+WKG
Sbjct: 330 RVMMEQFQYGNKICGEIELSKD--CWKALFEKYSFFESYKNYLQVDVVAADADDLRSWKG 387
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQF 366
WVESRLRQLTL IER T+ LQCHP+ +F D S+ +C++FMGL RK+G V EG+QF
Sbjct: 388 WVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTSRQCAHCAFFMGLHRKEGEVVQEGQQF 447
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 419
DIR TV+EF+ +V+MY KPGM+I V+HV RR +P +VFP G + SRPS+ T
Sbjct: 448 DIRGTVEEFRHSVNMYMFWKPGMEIYVSHVRRRQIPCYVFPDGYKRSRPSRPT 500
>gi|125555729|gb|EAZ01335.1| hypothetical protein OsI_23369 [Oryza sativa Indica Group]
Length = 760
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 266/443 (60%), Positives = 337/443 (76%), Gaps = 7/443 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
VL G + VHGPGADIDTLCVGP + REEDFF LH +L + EVTEL PVPDAHV
Sbjct: 96 VLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEEVTELQPVPDAHV 155
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE TVRSLNGCRV DQILRLV
Sbjct: 156 PVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEVTVRSLNGCRVADQILRLV 215
Query: 128 PKIQNFRTTLR-CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 186
P +++ + C+ + V GFLGG+NWALLVAR+CQLYPNAVPSMLVSRFF
Sbjct: 216 PNVEDSSLMMSICLMVELSNN---AKVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFF 272
Query: 187 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
RV+TQW+WPNPV+LCAIEE LG VWDPR+ +D+ H MPIITPAYPCMNSSYNVSTST
Sbjct: 273 RVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSSYNVSTST 332
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
LR+MM++FQ G++IC+ ++ ++A +W LFEPF FFEAYKNYL++DI AE+ +DLR WK
Sbjct: 333 LRVMMEQFQFGNKICQEIDISKA--NWSALFEPFQFFEAYKNYLQVDIIAEDGEDLRLWK 390
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQ 365
GWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C++FMGL RK+G + EG+Q
Sbjct: 391 GWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGAKIQEGQQ 450
Query: 366 FDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRA 425
FDIR TV EF+ + MY +PGM+++V+HV R+ +P++VFP G + RPS+ +++
Sbjct: 451 FDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRPSRHINHPQQS 510
Query: 426 LERKVSSHTKPGADDGRKRKQTD 448
+ V T + DG+ +++ D
Sbjct: 511 NKNDVEDGTANRSPDGQPKRKHD 533
>gi|125597568|gb|EAZ37348.1| hypothetical protein OsJ_21686 [Oryza sativa Japonica Group]
Length = 761
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 266/443 (60%), Positives = 337/443 (76%), Gaps = 7/443 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
VL G + VHGPGADIDTLCVGP + REEDFF LH +L + EVTEL PVPDAHV
Sbjct: 96 VLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEEVTELQPVPDAHV 155
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE TVRSLNGCRV DQILRLV
Sbjct: 156 PVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEVTVRSLNGCRVADQILRLV 215
Query: 128 PKIQNFRTTLR-CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 186
P +++ + C+ + V GFLGG+NWALLVAR+CQLYPNAVPSMLVSRFF
Sbjct: 216 PNVEDSSLMMSICLMVELSNN---AKVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFF 272
Query: 187 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
RV+TQW+WPNPV+LCAIEE LG VWDPR+ +D+ H MPIITPAYPCMNSSYNVSTST
Sbjct: 273 RVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSSYNVSTST 332
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
LR+MM++FQ G++IC+ ++ ++A +W LFEPF FFEAYKNYL++DI AE+ +DLR WK
Sbjct: 333 LRVMMEQFQFGNKICQEIDISKA--NWSALFEPFQFFEAYKNYLQVDIIAEDGEDLRLWK 390
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQ 365
GWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C++FMGL RK+G + EG+Q
Sbjct: 391 GWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGAKIQEGQQ 450
Query: 366 FDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRA 425
FDIR TV EF+ + MY +PGM+++V+HV R+ +P++VFP G + RPS+ +++
Sbjct: 451 FDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRPSRHINHPQQS 510
Query: 426 LERKVSSHTKPGADDGRKRKQTD 448
+ V T + DG+ +++ D
Sbjct: 511 NKNDVEDGTANRSPDGQPKRKHD 533
>gi|125538688|gb|EAY85083.1| hypothetical protein OsI_06439 [Oryza sativa Indica Group]
Length = 683
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 263/410 (64%), Positives = 327/410 (79%), Gaps = 5/410 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
VL G + VHGPGADID LC+GP + REE+FF L+ L+EM EVTEL PVPDAHV
Sbjct: 98 VLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVTLYGALSEMEEVTELQPVPDAHV 157
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+ IDLLYA +SL VIP D DISQ S+L + DE TVRSLNGCRV DQILRLV
Sbjct: 158 PVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNGCRVADQILRLV 217
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P + FR TLRC+++WA+RRGVYSNV G LGG++WALLVAR+CQLYPNAVPSMLVSRFFR
Sbjct: 218 PNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNAVPSMLVSRFFR 277
Query: 188 VYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
V+TQW+WPNPV+LCAIE + +LG VWDPR+NP+D+ H+MPIITPAYPCMNSSYNVSTST
Sbjct: 278 VFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNSSYNVSTST 337
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
LR++M++FQ G++IC+ +E N+A W +LFEPF FFEAY YL +DI A++ DDLR WK
Sbjct: 338 LRVIMEQFQFGNKICQEIELNKA--SWSSLFEPFQFFEAYTRYLVVDIVADDDDDLRLWK 395
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCSYFMGLQRKQGVPVGEGEQ 365
GW+ESRLRQLTLKIER T MLQCHP+P +++D S + +C+++MGL RK+G+ + G++
Sbjct: 396 GWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKEGMKI-RGQK 454
Query: 366 FDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRP 415
FDIR TV EF + MYT K GM ++V HV ++ +P +VF G + +RP
Sbjct: 455 FDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVCKKEIPLYVFEQGCQKTRP 504
>gi|58220773|gb|AAW68018.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 652
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 263/410 (64%), Positives = 327/410 (79%), Gaps = 5/410 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
VL G + VHGPGADID LC+GP + REE+FF L+ L+EM EVTEL PVPDAHV
Sbjct: 67 VLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVTLYGALSEMEEVTELQPVPDAHV 126
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+ IDLLYA +SL VIP D DISQ S+L + DE TVRSLNGCRV DQILRLV
Sbjct: 127 PVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNGCRVADQILRLV 186
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P + FR TLRC+++WA+RRGVYSNV G LGG++WALLVAR+CQLYPNAVPSMLVSRFFR
Sbjct: 187 PNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNAVPSMLVSRFFR 246
Query: 188 VYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
V+TQW+WPNPV+LCAIE + +LG VWDPR+NP+D+ H+MPIITPAYPCMNSSYNVSTST
Sbjct: 247 VFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNSSYNVSTST 306
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
LR++M++FQ G++IC+ +E N+A W +LFEPF FFEAY YL +DI A++ DDLR WK
Sbjct: 307 LRVIMEQFQFGNKICQEIELNKA--SWSSLFEPFQFFEAYTRYLVVDIVADDDDDLRLWK 364
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCSYFMGLQRKQGVPVGEGEQ 365
GW+ESRLRQLTLKIER T MLQCHP+P +++D S + +C+++MGL RK+G+ + G++
Sbjct: 365 GWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKEGMKI-RGQK 423
Query: 366 FDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRP 415
FDIR TV EF + MYT K GM ++V HV ++ +P +VF G + +RP
Sbjct: 424 FDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTRP 473
>gi|49388677|dbj|BAD25861.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
gi|125581374|gb|EAZ22305.1| hypothetical protein OsJ_05959 [Oryza sativa Japonica Group]
Length = 610
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 263/410 (64%), Positives = 327/410 (79%), Gaps = 5/410 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
VL G + VHGPGADID LC+GP + REE+FF L+ L+EM EVTEL PVPDAHV
Sbjct: 99 VLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVMLYGALSEMEEVTELQPVPDAHV 158
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+ IDLLYA +SL VIP D DISQ S+L + DE TVRSLNGCRV DQILRLV
Sbjct: 159 PVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNGCRVADQILRLV 218
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P + FR TLRC+++WA+RRGVYSNV G LGG++WALLVAR+CQLYPNAVPSMLVSRFFR
Sbjct: 219 PNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNAVPSMLVSRFFR 278
Query: 188 VYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
V+TQW+WPNPV+LCAIE + +LG VWDPR+NP+D+ H+MPIITPAYPCMNSSYNVSTST
Sbjct: 279 VFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNSSYNVSTST 338
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
LR++M++FQ G++IC+ +E N+A W +LFEPF FFEAY YL +DI A++ DDLR WK
Sbjct: 339 LRVIMEQFQFGNKICQEIELNKA--SWSSLFEPFQFFEAYTRYLVVDIVADDDDDLRLWK 396
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCSYFMGLQRKQGVPVGEGEQ 365
GW+ESRLRQLTLKIER T MLQCHP+P +++D S + +C+++MGL RK+G+ + G++
Sbjct: 397 GWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKEGMKI-RGQK 455
Query: 366 FDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRP 415
FDIR TV EF + MYT K GM ++V HV ++ +P +VF G + +RP
Sbjct: 456 FDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTRP 505
>gi|297598868|ref|NP_001046352.2| Os02g0227400 [Oryza sativa Japonica Group]
gi|255670737|dbj|BAF08266.2| Os02g0227400, partial [Oryza sativa Japonica Group]
Length = 602
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 263/410 (64%), Positives = 327/410 (79%), Gaps = 5/410 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
VL G + VHGPGADID LC+GP + REE+FF L+ L+EM EVTEL PVPDAHV
Sbjct: 91 VLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVMLYGALSEMEEVTELQPVPDAHV 150
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+ IDLLYA +SL VIP D DISQ S+L + DE TVRSLNGCRV DQILRLV
Sbjct: 151 PVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNGCRVADQILRLV 210
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P + FR TLRC+++WA+RRGVYSNV G LGG++WALLVAR+CQLYPNAVPSMLVSRFFR
Sbjct: 211 PNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNAVPSMLVSRFFR 270
Query: 188 VYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
V+TQW+WPNPV+LCAIE + +LG VWDPR+NP+D+ H+MPIITPAYPCMNSSYNVSTST
Sbjct: 271 VFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNSSYNVSTST 330
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
LR++M++FQ G++IC+ +E N+A W +LFEPF FFEAY YL +DI A++ DDLR WK
Sbjct: 331 LRVIMEQFQFGNKICQEIELNKA--SWSSLFEPFQFFEAYTRYLVVDIVADDDDDLRLWK 388
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCSYFMGLQRKQGVPVGEGEQ 365
GW+ESRLRQLTLKIER T MLQCHP+P +++D S + +C+++MGL RK+G+ + G++
Sbjct: 389 GWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKEGMKI-RGQK 447
Query: 366 FDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRP 415
FDIR TV EF + MYT K GM ++V HV ++ +P +VF G + +RP
Sbjct: 448 FDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTRP 497
>gi|242096166|ref|XP_002438573.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
gi|241916796|gb|EER89940.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
Length = 468
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 253/357 (70%), Positives = 301/357 (84%), Gaps = 3/357 (0%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
VL G + VHGPGADIDTLCVGP + REEDFF LH +L + +VTEL PVPDAHV
Sbjct: 87 VLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHGILAQTEDVTELQPVPDAHV 146
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE TVRSLNGCRV DQI+RLV
Sbjct: 147 PVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDEATVRSLNGCRVADQIIRLV 206
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P I+NFRTTLRC+++WAKRRGVYSNV GFLGG+NWALLVAR+CQLYPNAVPSMLVSRFFR
Sbjct: 207 PNIENFRTTLRCLKYWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFR 266
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
V+TQW+WPNPV+LC+IEE +G VWDPR+NP+D+ H MPIITPAYPCMNSSYNVSTSTL
Sbjct: 267 VFTQWQWPNPVMLCSIEEDEVGFPVWDPRKNPRDRCHHMPIITPAYPCMNSSYNVSTSTL 326
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
R+M+++FQ G++IC+ +E N+A W LFEPF FFEAYKNYL++DI AE+ +DLR WKG
Sbjct: 327 RVMVEQFQFGNKICQEIEMNKA--SWSALFEPFQFFEAYKNYLQVDIIAEDDEDLRLWKG 384
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEG 363
WVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C++FMGL RK+GV + EG
Sbjct: 385 WVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKIQEG 441
>gi|359484334|ref|XP_002280350.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
gi|297738746|emb|CBI27991.3| unnamed protein product [Vitis vinifera]
Length = 598
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 262/432 (60%), Positives = 325/432 (75%), Gaps = 6/432 (1%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
+++ G + VHGPG+DIDTLC+GP + REEDFF LH +L M V+EL P+P AHV
Sbjct: 87 LIVTFGSYRLGVHGPGSDIDTLCIGPSYVNREEDFFIRLHNILIGMEGVSELLPIPHAHV 146
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF GVSIDLLYA +S V+P+DLDIS +SIL ADE TVRSL+GCRV DQILRLV
Sbjct: 147 PVMKFKFEGVSIDLLYASVSHLVVPDDLDISNESILYEADEPTVRSLSGCRVADQILRLV 206
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P +++FRTTLRC++FWAKRRGVYSNV GFLGG+N ALLVAR+CQLYPNA PSMLVSRFFR
Sbjct: 207 PNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNLALLVARVCQLYPNANPSMLVSRFFR 266
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
VYTQW WPNPV+LC IE+ LG VWDPRRNP D+ H MPIITPAYP MNSSY+VSTSTL
Sbjct: 267 VYTQWHWPNPVMLCPIEDKELGFPVWDPRRNPLDRNHHMPIITPAYPNMNSSYSVSTSTL 326
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
MM +F ++IC +E N++ W LFEPF FF +Y+NYL++DI+A +ADDLR WKG
Sbjct: 327 EAMMKQFHTANKICNDIELNKS--SWGALFEPFLFFRSYQNYLQVDITATDADDLRAWKG 384
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMGLQRKQGVPVGEGEQF 366
WVESRLRQLTLK+ER T L C P P ++ D S+ +C+YFMGL++K GV V GE
Sbjct: 385 WVESRLRQLTLKVERCTIGKLLCVPCPREYVDTSRQCCHCTYFMGLRKKPGVEV--GEVI 442
Query: 367 DIRLTVKEFK-QAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRA 425
DIR+ +EFK + V+M++ PGM+I V+HV + LP++VFP R S + + +
Sbjct: 443 DIRVATQEFKEEIVNMFSFWTPGMEIHVSHVLKNQLPSYVFPDEYRKRSQSSKSINQQHQ 502
Query: 426 LERKVSSHTKPG 437
+RK++S G
Sbjct: 503 NKRKINSEMVDG 514
>gi|218195447|gb|EEC77874.1| hypothetical protein OsI_17161 [Oryza sativa Indica Group]
Length = 556
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/457 (50%), Positives = 300/457 (65%), Gaps = 37/457 (8%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
+++ G + VHG G+DID L VGP + R+ DFFG L L E V EL PVP AHV
Sbjct: 85 LVLPFGSYRLGVHGRGSDIDALVVGPSYVDRDRDFFGALAAALAETAGVAELQPVPGAHV 144
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PV+K +F GV +DL+YA + L V+P DLD+S S+L+ D T RSLNG RV D+ILRLV
Sbjct: 145 PVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVLRGLDLATARSLNGVRVADEILRLV 204
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P FRTTLRC++ WAK RGVYSNVAGFLGG+ WA+LVAR+C LYPNA PSML+ RFFR
Sbjct: 205 PDAAAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWAILVARVCLLYPNASPSMLLPRFFR 264
Query: 188 VYTQWRWPNPVLLCAIE--EGSLGLQ--VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
V+ +W+WP+PV+L AIE +G LGL VWDPRRNP+DK HLMPI+TPAYPCMNS YNVS
Sbjct: 265 VFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNPRDKIHLMPIVTPAYPCMNSGYNVS 324
Query: 244 TSTLRIMMDEFQRGHEIC-EAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA--D 300
+TLR++ ++ G +C E ++ WD LF+PF FF AYK+YL++D++ D
Sbjct: 325 HATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQPFNFFGAYKSYLQVDVTVTGGEED 384
Query: 301 DLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK--SKPLY----CSYFMGLQR 354
DLR WKGWVESRLR L+ ++E T ML CH HP ++ + ++P S+F+GL +
Sbjct: 385 DLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPYAAEPHNEPRRRRRTSSFFVGLSK 444
Query: 355 KQGVPVGEGEQ-FDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPS 413
P + Q FD+R T + FK+ V MY +PGM+++VAHV R++LP++V
Sbjct: 445 PPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGMEVAVAHVRRKDLPSYVL------- 497
Query: 414 RPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDN 450
R L R PG D KRK+ DD+
Sbjct: 498 ----------RQLLR------SPGRHDQLKRKRADDD 518
>gi|242074144|ref|XP_002447008.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
gi|241938191|gb|EES11336.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
Length = 548
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/410 (52%), Positives = 283/410 (69%), Gaps = 12/410 (2%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE-VTELHPVPDAH 66
+L+ G + VHG G+DID L VGP R++DFFG L L E E VT+L PVP AH
Sbjct: 87 LLLPFGSYRLGVHGGGSDIDALVVGPSFVDRDQDFFGVLAGALAEATEAVTDLQPVPGAH 146
Query: 67 VPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 126
VPVMK +F GV +DL+YA ++L V+P DLD+S ++L+ D T RS+NG RV D+ILRL
Sbjct: 147 VPVMKLRFRGVQVDLVYASVNLPVVPRDLDLSDRAVLRGLDHVTARSMNGVRVADEILRL 206
Query: 127 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 186
VP FRT LRC++ WAK RGVYSNV+GFLGG+ WA+LVAR+CQLYPNA PSMLVSRFF
Sbjct: 207 VPDAAAFRTALRCVKLWAKARGVYSNVSGFLGGVAWAILVARVCQLYPNAAPSMLVSRFF 266
Query: 187 RVYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
+V +QW+WP PV+LC IE + LGL VWD RRNP+D+ HLMP+ITPAYPCMN +YNVS +
Sbjct: 267 KVLSQWKWPTPVMLCDIEHDDELGLPVWDGRRNPRDRTHLMPVITPAYPCMNCTYNVSQA 326
Query: 246 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS-AENADDLRN 304
T RI+ ++ Q GH C+ + D W LF+PF FF +K+YL++D + A ++LR
Sbjct: 327 TQRIIKEQIQAGHVACQEIAAG-GDRGWGALFQPFPFFRTHKSYLQVDATVAGGEEELRE 385
Query: 305 WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC--SYFMGLQR------KQ 356
WKGWVESRLRQL K+ER T+ L CH +P + + L C S+F+GL + +
Sbjct: 386 WKGWVESRLRQLVAKVERDTFGELLCHQNPRAYDAEPHGLRCASSFFVGLSKPQQQRQQP 445
Query: 357 GVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVF 406
P G+ QFD+R T EF Q V Y +PG++++V HV R++LP +V
Sbjct: 446 SPPQGQQPQFDLRATADEFLQDVYTYRFWRPGLELAVKHVRRKDLPPYVM 495
>gi|357168295|ref|XP_003581579.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 552
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/412 (52%), Positives = 284/412 (68%), Gaps = 16/412 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAH 66
++ G + VHG G+DID L VGP + R+ DFFG L +L+EM + VTEL PVP AH
Sbjct: 84 VLPFGSYRLGVHGRGSDIDALVVGPSYVDRDHDFFGVLGGVLSEMTDDAVTELQPVPGAH 143
Query: 67 VPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 126
VPV+K +F GV +DLL+A + L V+PEDLD+ S+L+ D TVRS+NG RV D+ILRL
Sbjct: 144 VPVIKMRFRGVQVDLLFASVCLAVVPEDLDLRDRSVLRGMDLATVRSVNGVRVADEILRL 203
Query: 127 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 186
VP FRTTLRC++ WAK RGVYSNV GF GG+ WA+LVA +CQLYPNA PS+LVSRFF
Sbjct: 204 VPDAGAFRTTLRCVKLWAKARGVYSNVMGFPGGVAWAILVAFVCQLYPNAAPSVLVSRFF 263
Query: 187 RVYTQWRWPNPVLLCAIE--EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 244
+V W+WPNPV L IE + L L VWDPRRNP+D+ HLMP++TPAYPCMNS YNVS
Sbjct: 264 KVLAPWKWPNPVKLRDIEHDDDDLRLLVWDPRRNPRDRTHLMPVVTPAYPCMNSCYNVSH 323
Query: 245 STLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA---DD 301
+TLR + + Q G+ +C+ + + A W LFEPF FF+ YK+YLR+D+ D
Sbjct: 324 ATLRTITQQLQIGNAVCQKIVASGA--GWGALFEPFHFFKEYKSYLRVDVKVAGGGGEGD 381
Query: 302 LRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY--CSYFMGLQRKQGVP 359
LR WKGWVESRLRQL +++E T ML CHP+P ++ K L S+F+GL + Q P
Sbjct: 382 LREWKGWVESRLRQLVMRVETATAGMLLCHPNPQAYAAKPTDLQRTTSFFVGLSKPQPQP 441
Query: 360 VGEGEQ-----FDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVF 406
+ +Q FD+R T +EFK+ V MY +PGM++ V+H R++LP++V
Sbjct: 442 QEKEQQQPQVPFDLRETAEEFKRKVYMYVSWRPGMEVEVSHNRRKDLPSYVL 493
>gi|414585702|tpg|DAA36273.1| TPA: hypothetical protein ZEAMMB73_834827 [Zea mays]
Length = 552
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/407 (52%), Positives = 276/407 (67%), Gaps = 10/407 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
++ G + V G G+DID L VGP R++DFFG L +L E VTELHPVP AHVP
Sbjct: 84 VLPFGSYRLGVLGGGSDIDALVVGPSFVDRDQDFFGVLAGVLAETEAVTELHPVPGAHVP 143
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VMK +F GV +DL+YA ++L V+P +LD+S +L+ D T RS+NG RV D+I+RLVP
Sbjct: 144 VMKLRFRGVQVDLVYASVNLPVVPRNLDLSDRHVLRGLDHVTARSMNGVRVADEIVRLVP 203
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
FRTTLRC++ WAK RGVYSNV+GFLGG+ WA+LVAR+CQLYPNAVPSMLVSRFF+V
Sbjct: 204 DAAAFRTTLRCVKLWAKSRGVYSNVSGFLGGVAWAILVARVCQLYPNAVPSMLVSRFFKV 263
Query: 189 YTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
++ WRWP PV+LC IE + LGL VWD RRN D+ HLMP+ITPAYPCMN +YNVS +T
Sbjct: 264 FSHWRWPIPVMLCDIEHDDELGLPVWDVRRNLPDRSHLMPVITPAYPCMNCTYNVSRATH 323
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS-AENADDLRNWK 306
R++ ++ Q G C+ + DW LF+P FF +K+YL++D + A A++LR WK
Sbjct: 324 RVIKEQIQAGDVACQKIAAGGGR-DWGALFQPSPFFSTHKSYLQVDAAVAGGAEELREWK 382
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL--YCSYFMGL-----QRKQGVP 359
GWVESRLRQL K+ER T+ L CH +P + + L S+F+GL Q K P
Sbjct: 383 GWVESRLRQLVAKVERDTFGELLCHQNPRAYDAEPHGLRRASSFFVGLSKPQQQHKPHPP 442
Query: 360 VGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVF 406
G FD+R TV EF+Q V Y +PG+++ V HV R LP +V
Sbjct: 443 EGYPPFFDLRATVLEFQQDVYSYKFWRPGLELVVKHVRRNKLPAYVM 489
>gi|222629442|gb|EEE61574.1| hypothetical protein OsJ_15948 [Oryza sativa Japonica Group]
Length = 556
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/447 (51%), Positives = 294/447 (65%), Gaps = 37/447 (8%)
Query: 18 SVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGV 77
VHG G+DID L VGP + R+ DFFG L L E V EL PVP AHVPV+K +F GV
Sbjct: 95 GVHGRGSDIDALVVGPSYVDRDRDFFGALAAALAETAAVAELQPVPGAHVPVIKMRFHGV 154
Query: 78 SIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 137
+DL+YA + L V+P DLD+S S+L+ D T RSLNG RV D+ILRLVP FRTTL
Sbjct: 155 QVDLVYAGVCLPVVPGDLDLSGRSVLRGLDLATARSLNGVRVADEILRLVPDAAAFRTTL 214
Query: 138 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP 197
RC++ WAK RGVYSNVAGFLGG+ WA+LVA +C LYPNA PSML+ RFFRV+ +W+WP+P
Sbjct: 215 RCVKHWAKARGVYSNVAGFLGGVGWAILVACVCLLYPNASPSMLLPRFFRVFARWKWPSP 274
Query: 198 VLLCAIE--EGSLGLQ--VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 253
V+L AIE +G LGL VWDPRRNP+DK HLMPI+TPAYPCMNS YNVS +TLR++ ++
Sbjct: 275 VMLRAIEHNDGELGLSLPVWDPRRNPRDKIHLMPIVTPAYPCMNSGYNVSHATLRVITEQ 334
Query: 254 FQRGHEIC-EAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA--DDLRNWKGWVE 310
G +C E ++ WD LF+PF FF AYK+YL++D++ DDLR WKGWVE
Sbjct: 335 LAVGDAVCQEIVKAGSGGGGWDKLFQPFNFFGAYKSYLQVDVTVTGGEEDDLREWKGWVE 394
Query: 311 SRLRQLTLKIERHTYNMLQCHPHPGDFSDK--SKPLY----CSYFMGLQRKQGVPVGEGE 364
SRLR L+ ++E T ML CH HP ++ + ++P S+F+GL + P +
Sbjct: 395 SRLRLLSARVEADTSGMLLCHLHPQPYAAEPHNEPRRRRRTSSFFVGLSKPPAQPQQQQH 454
Query: 365 Q-FDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSR 423
Q FD+R T + FK+ V MY +PGM+++VAHV R++LP++V
Sbjct: 455 QLFDLRATTEGFKEEVYMYDYWRPGMEVAVAHVRRKDLPSYVL----------------- 497
Query: 424 RALERKVSSHTKPGADDGRKRKQTDDN 450
R L R PG D KRK+ DD+
Sbjct: 498 RQLLR------SPGRHDQLKRKRADDD 518
>gi|57834146|emb|CAE04327.2| OSJNBb0016D16.18 [Oryza sativa Japonica Group]
Length = 556
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/457 (49%), Positives = 298/457 (65%), Gaps = 37/457 (8%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
+++ G + VHG G+DID L VGP + + DFFG L L E V EL PVP AHV
Sbjct: 85 LVLPFGSYRLGVHGRGSDIDALVVGPSYVDCDRDFFGALATALAETAAVAELQPVPGAHV 144
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PV+K +F GV +DL+YA + L V+P DLD+S S+L+ D T RSLNG RV D+ILRLV
Sbjct: 145 PVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVLRGLDLATARSLNGVRVADEILRLV 204
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P FRTTLRC++ WAK RGVYSNVAGFLGG+ WA+LVA +C LYPNA PSML+ RFFR
Sbjct: 205 PDATAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWAILVACVCLLYPNASPSMLLPRFFR 264
Query: 188 VYTQWRWPNPVLLCAIE--EGSLGLQ--VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
V+ +W+WP+PV+L AIE +G LGL VWDPRRNP+DK HLMPI+TPAYPCMNS YNVS
Sbjct: 265 VFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNPRDKIHLMPIVTPAYPCMNSGYNVS 324
Query: 244 TSTLRIMMDEFQRGHEIC-EAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA--D 300
+TLR++ ++ G +C E ++ WD LF+PF FF AYK+YL++D++ D
Sbjct: 325 HATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQPFNFFGAYKSYLQVDVTVTGGEED 384
Query: 301 DLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK--SKPLY----CSYFMGLQR 354
DLR WKGWVESRLR L+ ++E T ML CH HP ++ + ++P S+F+GL +
Sbjct: 385 DLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPYAAEPHNEPRRRRRTSSFFVGLSK 444
Query: 355 KQGVPVGEGEQ-FDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPS 413
P + Q FD+R T + FK+ V MY +PGM+++VAHV R++LP++V
Sbjct: 445 PPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGMEVAVAHVRRKDLPSYVL------- 497
Query: 414 RPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDN 450
R L R PG D KRK+ DD+
Sbjct: 498 ----------RQLLR------SPGRHDQLKRKRADDD 518
>gi|413926073|gb|AFW66005.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 375
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 187/260 (71%), Positives = 221/260 (85%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
+L G + VHGPGADIDTLCVGP + REEDFF LH +L E EV EL PVPDAHV
Sbjct: 96 ILFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFVTLHGILAEKEEVAELQPVPDAHV 155
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PV+KFKF G+SIDLLYA +SL VIP D DISQ S+L + DE TVRSLNGCRV DQILRLV
Sbjct: 156 PVLKFKFRGISIDLLYASISLSVIPADFDISQGSVLCDVDEATVRSLNGCRVADQILRLV 215
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++NFRTTLRC+++WAKRRGVYSN+ GFLGG+NWALLVAR+CQLYPNAVPSMLVSRFFR
Sbjct: 216 PNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFR 275
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
V+TQW+WPNPV+LCAIE LG +WDPR+NP+D+ HLMPIITPAYPCMNSSYNVSTSTL
Sbjct: 276 VFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPIITPAYPCMNSSYNVSTSTL 335
Query: 248 RIMMDEFQRGHEICEAMEKN 267
R++M++FQ G+++C+ + +N
Sbjct: 336 RVIMEQFQFGNKVCQVLPEN 355
>gi|66806183|ref|XP_636814.1| poly polymerase [Dictyostelium discoideum AX4]
gi|74852689|sp|Q54J73.1|PAP_DICDI RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|60465216|gb|EAL63311.1| poly polymerase [Dictyostelium discoideum AX4]
Length = 809
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/466 (46%), Positives = 284/466 (60%), Gaps = 31/466 (6%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCVGP+H R DFF +L +L PE+TE V DA VP
Sbjct: 130 IFTFGSYRLGVHGPGSDIDTLCVGPKHIMRS-DFFDDLSDILKVHPEITEFTTVKDAFVP 188
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
V+ FSG+ IDL+YA+L+L IPE+L D+ +S L+N DE+++ SLNGCRVTDQIL+LV
Sbjct: 189 VITMVFSGIPIDLIYAKLALTAIPEELNDLIDESFLKNIDEKSILSLNGCRVTDQILKLV 248
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P I NFR LRC++ WA RRG+YSN+ GFLGG++WALL ARICQLYPN+ PS ++ RFF+
Sbjct: 249 PNIPNFRMALRCIKLWAIRRGIYSNILGFLGGVSWALLTARICQLYPNSAPSTIIHRFFK 308
Query: 188 VYTQWRWPNPVLLCAIEEGS-LGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
VY W+WP P+LLC I+EG LG +VW+P+R DK HLMPIITPAYP MNS+YNVS ST
Sbjct: 309 VYEIWKWPAPILLCHIQEGGILGPKVWNPKR---DKAHLMPIITPAYPSMNSTYNVSKST 365
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
L++M EF RG EI +E E W L E FF Y Y+ ID + N +D R W+
Sbjct: 366 LQLMKSEFVRGAEITRKIETGEC--TWKNLLEKCDFFTRYSFYIEIDCYSMNEEDSRKWE 423
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK----SKP--LYCSYFMGLQRKQGVPV 360
GW+ES+LR L +E T M P+P F++ + P + S+FMGL
Sbjct: 424 GWIESKLRFLISNLE-STPKMKFAVPYPKGFTNNLHKANNPDQICTSFFMGLSFNFSNTP 482
Query: 361 GEGEQFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNLPNFVFPGGVRPSRPSK 417
G + D+ V EF + + +P M I V ++ ++ LP FV G P P K
Sbjct: 483 GADKSVDLTKAVTEFTGIIKDWLRTQPNPDTMDIKVQYIKKKQLPAFVKDEG--PEEPVK 540
Query: 418 GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 463
T +K SS +P A ++K +N D L + K T
Sbjct: 541 TT--------KKRSSTGEPSA---TRKKLKSENSDNKLNSPKSPIT 575
>gi|307107277|gb|EFN55520.1| hypothetical protein CHLNCDRAFT_23208 [Chlorella variabilis]
Length = 632
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/417 (49%), Positives = 271/417 (64%), Gaps = 25/417 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGE----LHQMLTEMPEVTELHPVPD 64
+ G + VHGPGADIDTLCVGP +ATRE DFFG L ML +PEV L V
Sbjct: 79 IFTFGSYRLGVHGPGADIDTLCVGPSYATREGDFFGSEPHCLQAMLCALPEVLALRAVTA 138
Query: 65 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 124
A+VPVM+ KF G+SIDLLYARLS+ ++ EDLDI L++ D+Q+VRSLNGCRVTD IL
Sbjct: 139 AYVPVMEMKFCGISIDLLYARLSVPLVREDLDIGATHTLRHCDDQSVRSLNGCRVTDMIL 198
Query: 125 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP---------N 175
R VP + +FRT LRC++ WA+RRGVYSNV G+LGG+NWA+LVA +C+L P
Sbjct: 199 REVPSVPHFRTALRCLKLWAERRGVYSNVTGYLGGVNWAILVAYVCKLQPCLLASPPHLG 258
Query: 176 AVPSMLVSRFFRVYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMPIITPAYP 234
P + V +VY+QW WP P++L AIE + SL + VWDPR NP+D+ HLMPIITPAYP
Sbjct: 259 PAPCLPVP---QVYSQWAWPTPIMLRAIERDPSLAMPVWDPRENPRDRTHLMPIITPAYP 315
Query: 235 CMNSSYNVSTSTLRIMMDEFQRGHEIC-EAMEKNEADV-DWDTLFEPFTFFEAYKNYLRI 292
CMNSSYNVS TL +M +EF+RG E+C M N + + DW L EP FFE +K++L++
Sbjct: 316 CMNSSYNVSECTLAVMAEEFRRGDEVCGRIMTHNGSGLTDWAQLLEPLPFFEGFKHFLQV 375
Query: 293 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY----CSY 348
++ A + +D W+GWV SR+R L +K+++ Q G S P C Y
Sbjct: 376 EVMASSQEDFEVWEGWVHSRMR-LLIKVDQQQQQQQQQQDGGGGGSVADPPAQQQPRCFY 434
Query: 349 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 405
FMGL +K+ + + + + D+ V EF V + R+ GM ISV H+ +R LP +V
Sbjct: 435 FMGLSKKKAMIIPQS-KVDLTQPVNEFAHKVKEFEQRREGMDISVRHLLQRQLPEWV 490
>gi|384247369|gb|EIE20856.1| Poly(A) polymerase, partial [Coccomyxa subellipsoidea C-169]
Length = 504
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/435 (45%), Positives = 265/435 (60%), Gaps = 41/435 (9%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGE----LHQMLTEMPEVTELHPVPD 64
+ G + VHGPGADIDTLCVGPRH +R+ FFG L +ML+++PEVTEL PV D
Sbjct: 74 IFTFGSYRLGVHGPGADIDTLCVGPRHVSRDLHFFGTEEHCLQKMLSDLPEVTELQPVVD 133
Query: 65 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 124
+ VPV+K KFSGVSIDLLYA+L+ V+PE+LD+ S L+NAD+++VRSLNGCRVTD +L
Sbjct: 134 SFVPVIKMKFSGVSIDLLYAQLATAVVPENLDVGAISTLRNADDKSVRSLNGCRVTDTLL 193
Query: 125 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSR 184
V I+ FRT LR ++ WA+RRG+YSNV G+LGG+NWA+LVA C+LYP + S++V R
Sbjct: 194 NQVESIETFRTALRVIKLWAERRGIYSNVVGYLGGVNWAILVAYTCKLYPCGIASVIVDR 253
Query: 185 FFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 244
FF+V+ +W WP P++L IE ++GLQVWDPR NP+D HLMPIITPAYP NSSYNVS
Sbjct: 254 FFKVFARWPWPTPIMLREIEHDAMGLQVWDPRINPRDSMHLMPIITPAYPAANSSYNVSE 313
Query: 245 STLRIM------------MDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 292
STL M +EF+ G ++C + W L EP FF Y+NYL+
Sbjct: 314 STLAAMKARTQLHQTCLLQEEFEHGEKVCTRILAEGGLTKWHKLLEPVPFFRNYRNYLQA 373
Query: 293 DISAENADDL-------------RNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-- 337
+ + + W GWV SRLRQL +++E + P P
Sbjct: 374 RLFLTPSQFIPFATCCFMHCILQEAWDGWVHSRLRQLVMRVE----PFVTVRPWPKAIFP 429
Query: 338 ----SDKSKPLYCSYFMGLQRK--QGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQI 391
+P C YFMGL++K P G ++ V+EFK V Y K GM +
Sbjct: 430 PRGPEAAGQPRRCFYFMGLKKKPLPSQPGGRASSVNLNNPVQEFKNQVMGYLSWKEGMHV 489
Query: 392 SVAHVTRRNLPNFVF 406
+ H ++ LP+FV
Sbjct: 490 LITHQMQKALPSFVL 504
>gi|432902553|ref|XP_004077012.1| PREDICTED: poly(A) polymerase gamma-like [Oryzias latipes]
Length = 834
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/411 (47%), Positives = 267/411 (64%), Gaps = 12/411 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + E+ +L V DA VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFQSFFEKLKQHEEIKDLRAVEDAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KFKF G+ IDLL+ARL+L IP++LD+ DSIL+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSILKNLDIRCIRSLNGCRVTDEILYLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNAV + LV +FF V
Sbjct: 216 NKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 276 FSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +EF+ G + + + + +A +W LFEP +FF+ YK+Y+ + SA ++ W G
Sbjct: 336 IMSEEFKYGLSVTDEILQGKA--EWPKLFEPPSFFQKYKHYIVLTASASTEENHLEWVGL 393
Query: 309 VESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSK-PLYCSYFMGLQRKQGVPVGEGE 364
VES++R L +ER+ Y + +P PG ++S+ C +F+G+ K+ V E
Sbjct: 394 VESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRSENDFVCMWFIGIIFKK-VENAESV 452
Query: 365 QFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 411
D+ ++ F V + + K GM+I HV ++ L ++ P V+
Sbjct: 453 NIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHQYLPPELVQ 503
>gi|281200800|gb|EFA75017.1| polyA polymerase [Polysphondylium pallidum PN500]
Length = 757
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/449 (44%), Positives = 278/449 (61%), Gaps = 35/449 (7%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V GP +DIDTLCV P+H R DFF L + L P++TEL+ V DA+VP
Sbjct: 104 IFTFGSYRLGVSGPSSDIDTLCVAPKHIMRS-DFFDFLGEALKVHPDITELNMVKDAYVP 162
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
V+ FSG++IDL++ARLSL I ED+ D+ D+ L+N D+Q++ SLNGCRVTD+IL LV
Sbjct: 163 VITMIFSGIAIDLIFARLSLSSISEDMNDLIDDAYLKNLDDQSITSLNGCRVTDKILTLV 222
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P FR LR ++ WA+RRG+YSNV GFLGG++WALL ARICQLYPNA PS +++RFF+
Sbjct: 223 PSRATFRMALRFIKLWAQRRGIYSNVLGFLGGVSWALLTARICQLYPNAAPSTIINRFFK 282
Query: 188 VYTQWRW----PNPVLLCAIEEGSL-GLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 242
+Y WRW P PVLLC I++G + +VW+ +R DK HLMPI+TPAYP MNS+YNV
Sbjct: 283 IYETWRWGVPGPTPVLLCPIQDGGIFAAKVWNQKR---DKSHLMPILTPAYPSMNSTYNV 339
Query: 243 STSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDL 302
S STL ++ DEF RG++I + +E EA +W+ L E FF Y+ YL+ID SA+N ++
Sbjct: 340 SKSTLSLLKDEFARGNQIAQKLESGEA--NWNKLLEKSDFFSRYQFYLQIDCSAQNEEEH 397
Query: 303 RNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-------------------SKP 343
R W+GW+ES+LR+L +E+ T M P P F +K +
Sbjct: 398 RKWEGWIESKLRKLISFLEQ-TPKMKFAIPFPKSFENKPTPAATTTAANGEAVTDANNSN 456
Query: 344 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 403
+ S+FMGL G + DI V +F + + + P M++ V ++ RR LP
Sbjct: 457 VCTSFFMGLGFNFSNAPGADKSVDITKAVIDFTHLIKDWAGKGPTMEMKVHYIKRRQLPA 516
Query: 404 FV---FPGGVRPSRPSKGTWDSRRALERK 429
FV P +P +G+ +S ++K
Sbjct: 517 FVKAEAPPEEKPKAKKRGSANSADVAKKK 545
>gi|290990211|ref|XP_002677730.1| predicted protein [Naegleria gruberi]
gi|284091339|gb|EFC44986.1| predicted protein [Naegleria gruberi]
Length = 559
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/404 (47%), Positives = 265/404 (65%), Gaps = 16/404 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L+ G + VHGPGADIDTLC+ P + + F +LH +L PE+ EL PVPDA+VP
Sbjct: 78 LVTFGSFRLGVHGPGADIDTLCIVP-NMVEKHHCFTDLHDILKLRPEIAELKPVPDAYVP 136
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ F GV IDLL+ARLS VIP DLDI +S L++AD++T RSLNG RV DQIL+LVP
Sbjct: 137 LITMVFDGVEIDLLFARLSRTVIPADLDILDESNLKDADDETQRSLNGPRVADQILKLVP 196
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+NFRTTLRC++ WA RR +Y N+ G+LGG+ +A+L A+ICQ+YPNA PS L+++FF V
Sbjct: 197 NQENFRTTLRCIKLWATRRAIYGNIVGYLGGVAYAILTAKICQMYPNAAPSTLLTKFFTV 256
Query: 189 YTQWRWPN-PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
Y QW W PVLL IEEG+L +VW+P+ NP+DK HLMPIITP+YPCMNS++NVS +TL
Sbjct: 257 YQQWNWGKVPVLLRPIEEGTLNFKVWNPKLNPRDKQHLMPIITPSYPCMNSTFNVSKTTL 316
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
+ M +EF+RG I + E +W+TLFE FF Y NYL+++I+ N D W G
Sbjct: 317 KDMKNEFERGASITQKAENGLE--NWETLFEATDFFVRYSNYLQVEINTSNEVDHLKWIG 374
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYF-MGLQRKQGVPVGEGEQF 366
+++S++R L K+E L H +P F + + SYF +GL+ KQ P GEG
Sbjct: 375 FIQSKVRFLIPKLE--AVPGLTIHIYPDYFHNNQGGAFSSYFYIGLEYKQTKP-GEGSVV 431
Query: 367 DIRLTVKEFKQAVSM----YTLRKPGMQISVAHVTRRNLPNFVF 406
++ + EF++ ++ + KP +Q + R +P FV
Sbjct: 432 NLASCIAEFEELLTWPDKNENMEKPKIQ----PIKRNAIPEFVI 471
>gi|270004464|gb|EFA00912.1| hypothetical protein TcasGA2_TC003818 [Tribolium castaneum]
Length = 565
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/459 (42%), Positives = 284/459 (61%), Gaps = 17/459 (3%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PRH +R DFFG +++L + PEVT+L V +A VPV+K
Sbjct: 109 FGSYRLGVHNRGADIDALCVAPRHISRN-DFFGSFYELLKKQPEVTDLRAVEEAFVPVIK 167
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ ID+L+ARL L IP+ +D+ D +L+N D++ VRSLNGCRVTD+ILRLVP +
Sbjct: 168 MNFDGIEIDMLFARLLLKEIPDSMDLRDDLLLKNLDQKCVRSLNGCRVTDEILRLVPNVD 227
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAKR G+YSN G+LGG++WA+LVAR CQLYPNA P+ LV +FF V++Q
Sbjct: 228 NFRLALRAIKLWAKRHGIYSNALGYLGGVSWAMLVARTCQLYPNAAPATLVHKFFLVFSQ 287
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WP PVLL +LG VWDPR N +D+YHLMPIITPAYP NS++NVS ST +I+M
Sbjct: 288 WKWPQPVLLKQPSNVNLGFAVWDPRVNIQDRYHLMPIITPAYPQQNSTFNVSGSTRQIIM 347
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
+EF+ G ++ + + ++ WD LFEP FF YK+++ + +SAE+ +D W G VES
Sbjct: 348 EEFKLGLQLTDDIMLSKQ--TWDKLFEPPLFFMKYKHFIVLLVSAESPEDHLEWCGLVES 405
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDF----SDKSKPLYCS-YFMGLQRKQGVPVGEGEQF 366
+ R L +ER+ + L H +P F S + +CS +F+GL+ + + F
Sbjct: 406 KFRLLIGTLERNQHITL-AHINPESFSLLESQRESNTHCSMWFIGLEFAKSENLNVNLTF 464
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 426
DI+ + + ++ K GM++ HV R+ L ++ P ++ R + T S+
Sbjct: 465 DIQQFTETVQNHALNISMLKEGMKLEARHVKRKQLYQYLSPSLLKRERKTSITVKSQSNG 524
Query: 427 ERKVSSHTKPGADDGRKRKQTDDNVDTHLR-NAKCHATM 464
+ PG D DN + +R + + H+T+
Sbjct: 525 TDSKKRLSDPGNSDS-------DNPNKKIRLSEEMHSTV 556
>gi|13365529|dbj|BAB39138.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/418 (46%), Positives = 269/418 (64%), Gaps = 12/418 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + E+ +L V DA VP
Sbjct: 98 IFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFFEKLKRLDEIKDLRAVEDAFVP 156
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KFKF G+ IDLL+ARL+L IP++LD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 157 VIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLDIRCIRSLNGCRVTDEILYLVP 216
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNAV + LV +FF V
Sbjct: 217 NKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLV 276
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 277 FSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +EF+ G + + + + +A DW LFEP FF+ YK+Y+ + SA ++ W G
Sbjct: 337 IMSEEFKNGLTVTDEILQGKA--DWSKLFEPPNFFQKYKHYIVLTASASTEENHLEWIGL 394
Query: 309 VESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGE 364
VES++R L +ER+ Y + +P PG + ++ + S +F+G+ K+ + +
Sbjct: 395 VESKIRVLVGNLERNEYITLAHVNPQSFPGSKENHNENEFVSMWFIGISFKK-LDNSDCV 453
Query: 365 QFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKG 418
D+ ++ F V S + K GM I HV ++ L +++ P V+ + S G
Sbjct: 454 NIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHVKKKQLHHYLPPELVQRKKKSLG 511
>gi|452825557|gb|EME32553.1| poly(A) polymerase [Galdieria sulphuraria]
Length = 584
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/461 (44%), Positives = 277/461 (60%), Gaps = 53/461 (11%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFG-------------ELHQMLTEMPE 55
L G + V+ P ADIDTLC+ PR+ R D FG L + P+
Sbjct: 92 LFTFGSYRLGVNPPNADIDTLCIVPRYVERNRDVFGIPSESGSVPEEENVLVNIFKSHPK 151
Query: 56 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 115
+ ++ PV DAHVPV+KFKF+GV IDLL ARL +PE LDI DSIL+N D++T RS+N
Sbjct: 152 IEDVVPVFDAHVPVVKFKFAGVEIDLLCARLQFSKLPERLDILDDSILRNVDDETQRSVN 211
Query: 116 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 175
G RVTD ILRLVP ++ FRTTLR ++FWAK RG+YSNV GFLGG++WA+LVARICQLYP+
Sbjct: 212 GVRVTDAILRLVPNVETFRTTLRAVKFWAKNRGIYSNVLGFLGGVSWAILVARICQLYPH 271
Query: 176 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG--SLGLQVWDPRRNPKDKYHLMPIITPAY 233
A ++++SRFFRVY+QW+WPNPVLL +I G S G +VW+P P D+ HLMP+ITPAY
Sbjct: 272 AAANVILSRFFRVYSQWKWPNPVLLTSISPGKPSCGFKVWNPAVFPADRKHLMPVITPAY 331
Query: 234 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAM-------------EKNEAD---------- 270
P MNS++NVS +TLRI+ +E RG EI + + E E D
Sbjct: 332 PSMNSTHNVSRTTLRIIQEEIHRGLEITDKILCQSNSSRKTISTEDTENDQTTQVEHSEE 391
Query: 271 ---------VDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 321
+ W LFE FF +KNYL+I++ + A++ R W G+VES+LR LTLK+E
Sbjct: 392 TNLVKETEVMTWSKLFERTDFFSKFKNYLQINVISGTAENQRKWHGFVESKLRVLTLKLE 451
Query: 322 RHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRK-QGVPVGEG---EQFDIRLTVKEFKQ 377
++ ++ +P+P ++ S+F+GL +P G + D+ V E+
Sbjct: 452 ILSHTLI--YPYPVPYTRPGVQFCESFFIGLSFSLPKLPNQNGSKERKIDMSGPVSEWVN 509
Query: 378 AVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKG 418
V + R M++SV HV R+ LP +VF SR K
Sbjct: 510 YVLSWPFRTSDMEVSVEHVKRKFLPEYVFKDENHRSRKRKS 550
>gi|328871002|gb|EGG19374.1| polyA polymerase [Dictyostelium fasciculatum]
Length = 803
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/444 (44%), Positives = 269/444 (60%), Gaps = 48/444 (10%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTE-------------- 58
G + VH G+DIDTLCV P+H R DFFG L +L PE+TE
Sbjct: 158 GSYRLGVHASGSDIDTLCVTPKHIMRA-DFFGTLADVLCVHPEITEFTVSTFFSGSSGSS 216
Query: 59 -------------------LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDL-DIS 98
+ PV DA VPV+K F G+ IDL++ARLS+ IPEDL D+
Sbjct: 217 GGSSSGSSGLQRILIKKTMVMPVKDAFVPVIKMIFCGIPIDLIFARLSIPAIPEDLNDLI 276
Query: 99 QDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLG 158
++ L+N D++ + SLNGCRVTDQILRLVP + FR LRC++ WA+RRGVYSNV G LG
Sbjct: 277 DENYLKNVDDKCIVSLNGCRVTDQILRLVPNVTTFRMALRCIKLWAQRRGVYSNVLGLLG 336
Query: 159 GINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-GSLGLQVWDPRR 217
G++WALL ARICQLYPNA PS +++RFF++Y W+WP+P+LLC I++ G L +VW+ +R
Sbjct: 337 GVSWALLTARICQLYPNAAPSTIINRFFKIYDGWKWPSPILLCQIQDGGQLAAKVWNQKR 396
Query: 218 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF 277
DK HLMPI+TPAYP MNS+YNVS STL ++ EF RG EI + ++ E W L
Sbjct: 397 ---DKSHLMPILTPAYPSMNSTYNVSRSTLSLLKSEFSRGAEITKKIDSGER--KWTDLV 451
Query: 278 EPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 337
E FF Y+ YL+ID+SA D R W+GW+ES+LR L +E+ T NM P+ F
Sbjct: 452 EKGDFFTRYRFYLQIDVSAPEEDTHRKWEGWIESKLRILISNLEQ-TPNMKFAIPYAKSF 510
Query: 338 SDKSKPL---YCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISV 393
++K+ + C+ +FMGLQ +G + D+ V F + + + P +++ +
Sbjct: 511 ANKASAVNGGICTCFFMGLQFNFSTAIGADKNVDLTGAVTSFTNLIKDWPGKLPTIEMKI 570
Query: 394 AHVTRRNLPNFVFPGGVRPSRPSK 417
++ ++NLP FV G P P K
Sbjct: 571 HYIKKKNLPVFVKDEG--PEHPPK 592
>gi|41054866|ref|NP_956915.1| poly(A) polymerase gamma [Danio rerio]
gi|34783795|gb|AAH56818.1| Poly(A) polymerase gamma [Danio rerio]
Length = 744
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/418 (46%), Positives = 269/418 (64%), Gaps = 12/418 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L E+ +L V DA VP
Sbjct: 98 IFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFFEKLKRHDEIKDLRAVEDAFVP 156
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KFKF G+ IDLL+ARL+L IP++LD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 157 VIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLDIRCIRSLNGCRVTDEILYLVP 216
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNAV + LV +FF V
Sbjct: 217 NKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLV 276
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 277 FSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +EF+ G + + + + +A DW LFEP FF+ Y++Y+ + SA ++ W G
Sbjct: 337 IMNEEFKNGLTVTDEILQGKA--DWSKLFEPPNFFQQYRHYIVLTASASTEENHLEWIGL 394
Query: 309 VESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGE 364
VES++R L +ER+ Y + +P PG ++++ + S +F+G+ K+ + +
Sbjct: 395 VESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRNENDFVSMWFIGISFKK-LDNSDCV 453
Query: 365 QFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKG 418
D+ ++ F V S + K GM I HV ++ L +++ P V+ + S G
Sbjct: 454 NIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHVKKKQLHHYLPPELVQRKKKSLG 511
>gi|410900416|ref|XP_003963692.1| PREDICTED: poly(A) polymerase gamma-like [Takifugu rubripes]
Length = 861
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/472 (43%), Positives = 286/472 (60%), Gaps = 16/472 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + E+ +L V DA VP
Sbjct: 95 IFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFQSFFEKLKQHEEIKDLRAVEDAFVP 153
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KFKF G+ IDLL+ARL+L IP++LD+ DSIL+N D + +RSLNGCRVTD+IL LVP
Sbjct: 154 VIKFKFDGIEIDLLFARLALPSIPDNLDLRGDSILKNLDIRCIRSLNGCRVTDEILYLVP 213
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNAV + LV +FF V
Sbjct: 214 NKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLV 273
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 274 FSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 333
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +EF+ G + + + + +A +W LFEP FF+ YK+Y+ + SA ++ W G
Sbjct: 334 IMSEEFKYGLSVTDEILQGKA--EWSKLFEPPHFFQKYKHYIVLAASASTEENHLEWIGL 391
Query: 309 VESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGE 364
VES++R L +ER+ Y + +P PG ++++ + S +F+G+ K+ + E
Sbjct: 392 VESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRNENDFVSMWFIGIIFKK-MENAESV 450
Query: 365 QFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTW 420
D+ ++ F V + + K GM+I HV ++ L ++ P V+ + +
Sbjct: 451 NIDLTYDIQSFTDTVYRQANNINMLKNGMKIEATHVKKKQLNLYLPPELVQ--KKKRSIA 508
Query: 421 DSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFR 472
D R+ S + + TD T + C + P+S E R
Sbjct: 509 DLNRSSNGGSSKRISLDSSHLDSSRDTD--TGTPFSSPPCKQSKPASDTEDR 558
>gi|380022244|ref|XP_003694961.1| PREDICTED: poly(A) polymerase gamma [Apis florea]
Length = 619
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/482 (42%), Positives = 286/482 (59%), Gaps = 13/482 (2%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PRH R D+F ++L EVT+L V +A VPV+K
Sbjct: 108 FGSYRLGVHHKGADIDALCVVPRHIYRS-DYFTSFFELLKMQEEVTDLRAVEEAFVPVIK 166
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ ID+L+A+L+L IP+ +D+ D +L+N D++ VRSLNGCRVTD+ILRLVP I+
Sbjct: 167 MNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIE 226
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAKR G+YSNV G+LGG++WA+LVAR CQLYPNAV + L+ +FF V++Q
Sbjct: 227 NFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKFFLVFSQ 286
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WP PVLL + +LG VWDPR N D+YHLMPIITPAYP NS++NVS ST IM
Sbjct: 287 WKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITPAYPQQNSTFNVSVSTRTIMQ 346
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
+ F+ G I E + +A WD LFEP FF YK+Y+ + + A+D W G VES
Sbjct: 347 EAFENGLSITEEIIMGKA--TWDKLFEPPNFFGKYKHYIVLLARSLTAEDQLEWCGLVES 404
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPLYCS-YFMGLQRKQGVPVGEGEQFDI 368
++R L +ER+ + L H +P F + +CS +F+GL + + +DI
Sbjct: 405 KIRHLIGTLERNPHITL-AHVNPEAFPPLEPEPERHCSMWFIGLLFAKSENLNVDLTYDI 463
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALER 428
+ V + ++ K GM I V HV +R+L +V P ++ R GT +
Sbjct: 464 KSFVDSILRQAEQLSMLKEGMWIEVKHVKKRDLHTYVSPSLLKRERKVSGTVHKNGNIAG 523
Query: 429 KVSSHT----KPGADDGRKRKQTDDNVDTHLRNAKCH-ATMPSSSGEFREGSPIMSTISS 483
+S + PG RKR +D N DT ++ K + PS + +GS ++ +
Sbjct: 524 NGNSGSVSPRNPGNTTNRKR-LSDQNQDTSIKKRKVNDGEQPSVTHHGEDGSLVVQSCGE 582
Query: 484 SS 485
S
Sbjct: 583 DS 584
>gi|157109674|ref|XP_001650777.1| poly a polymerase [Aedes aegypti]
gi|108878961|gb|EAT43186.1| AAEL005356-PA [Aedes aegypti]
Length = 780
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/437 (44%), Positives = 277/437 (63%), Gaps = 31/437 (7%)
Query: 1 MPRYLPLVLIG----LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEV 56
MP L L G G + VH GADID LCV PR+ R D+FG ++L + PEV
Sbjct: 153 MPEALAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERA-DYFGSFFELLKKQPEV 211
Query: 57 TELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNG 116
TE V +A VPV+K F G+ IDLL+ARL+L IP++ D+ D +L+N D ++VRSLNG
Sbjct: 212 TECRAVEEAFVPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDKLLKNLDPKSVRSLNG 271
Query: 117 CRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA 176
CRVTD+ILRLVP I NFR LR ++ WAK+ G+YSN G+ GG++WA+LVAR CQLYPNA
Sbjct: 272 CRVTDEILRLVPNIDNFRLALRAIKLWAKKHGIYSNSLGYFGGVSWAMLVARTCQLYPNA 331
Query: 177 VPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCM 236
V + LV +FF V+++W+WP PVLL + +LG QVWDPR N +D++HLMPIITPAYP
Sbjct: 332 VAATLVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQ 391
Query: 237 NSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISA 296
NS++NVS+ST ++M++EF RG +I + + ++A WD LFE +FF Y++++ + +++
Sbjct: 392 NSTFNVSSSTRKVMLNEFNRGMQITDEIMLSKA--GWDKLFEAPSFFFKYRHFIVLLVTS 449
Query: 297 ENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-------------SDKSKP 343
NADD W G VES++R L L +ER+ + L H +P F SD S+
Sbjct: 450 NNADDHLEWCGLVESKIRYLILNLERNQHINL-AHVNPKCFEQHEQNQTERQRESDGSRA 508
Query: 344 -LYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT----LRKPGMQISVAHVT 397
CS +F+GL+ ++ E D+ +++ F +V + L K GM+I HV
Sbjct: 509 STLCSLWFIGLEFER----SENLNVDLTESIQSFTDSVHKHAVHIKLLKDGMKIEARHVR 564
Query: 398 RRNLPNFVFPGGVRPSR 414
R+ L ++ P ++ R
Sbjct: 565 RKQLSQYLDPNLLKRER 581
>gi|120952595|ref|NP_991321.2| poly(A) polymerase alpha [Danio rerio]
Length = 723
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/529 (40%), Positives = 300/529 (56%), Gaps = 56/529 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF ++ L E EV +L V +A VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEKLKEQEEVKDLRAVEEAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNAV + LV +FF V
Sbjct: 215 NIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL E+ +L L VWDPR P D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 275 FSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRA 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM++EF+RG I + + +N+A DW LFE FF+ YK+Y+ + SA+ W G
Sbjct: 335 IMVEEFKRGLAITDEILQNKA--DWSKLFEAPNFFQKYKHYIVLLASAQTEKQHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + +DK + + +G+ K+ EG
Sbjct: 393 VESKIRILVGNLEKNEFITLAHVNPQSFPGPKEGNDKEE-FSTMWVIGIVFKK----MEG 447
Query: 364 EQ-------FDIR-LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRP 415
+ FDI+ T ++QA++ + M+I+ HV R+ L +
Sbjct: 448 SENLNVDLTFDIQSFTDTVYRQAITSKMFEQ-DMKITAMHVKRKQLHQLL---------- 496
Query: 416 SKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHA----TMPSSSGEF 471
A+ R H+ G R D N+D L + + T PS++
Sbjct: 497 ------PEVAIHRSKRKHSSDGV-----RAMNDSNLDLSLDSDNSMSVPSPTGPSAAKIA 545
Query: 472 REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 520
R SP ST +++ + +EL G EN S+ G+ +S
Sbjct: 546 RAPSPQGSTGTAT---------NTSELQGKTEATGENTHLASVDGTSSS 585
>gi|13365531|dbj|BAB39139.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/405 (46%), Positives = 262/405 (64%), Gaps = 12/405 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L E+ +L V DA VP
Sbjct: 98 IFTFGSYRLGVHTKGADIDALCVAPRHIERT-DFFSSFFEKLKRHDEIKDLRAVEDAFVP 156
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KFKF G+ IDLL+ARL+L IP++LD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 157 VIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLDIRCIRSLNGCRVTDEILYLVP 216
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNAV + LV +FF V
Sbjct: 217 NKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLV 276
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 277 FSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +EF+ G + + + + +A DW LFEP FF+ YK+Y+ + SA ++ W G
Sbjct: 337 IMSEEFKNGLTVTDEILQGKA--DWSKLFEPPNFFQKYKHYIVLTASASTEENHLEWIGL 394
Query: 309 VESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGE 364
VES++R L +ER+ Y + +P PG + ++ + S +F+G+ K+ + +
Sbjct: 395 VESKIRVLVGNLERNEYITLAHVNPQSFPGSKENHNENEFVSMWFIGISFKK-LDNSDCV 453
Query: 365 QFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V S + K GM I HV ++ L +++
Sbjct: 454 NIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHVKKKQLHHYL 498
>gi|328792143|ref|XP_393202.3| PREDICTED: poly(A) polymerase gamma [Apis mellifera]
Length = 619
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/482 (42%), Positives = 285/482 (59%), Gaps = 13/482 (2%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PRH R D+F ++L EVT+L V +A VPV+K
Sbjct: 108 FGSYRLGVHHKGADIDALCVVPRHIYRS-DYFTSFFELLKMQEEVTDLRAVEEAFVPVIK 166
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ ID+L+A+L+L IP+ +D+ D +L+N D++ VRSLNGCRVTD+ILRLVP I+
Sbjct: 167 MNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIE 226
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAKR G+YSNV G+LGG++WA+LVAR CQLYPNAV + L+ +FF V++Q
Sbjct: 227 NFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKFFLVFSQ 286
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WP PVLL + +LG VWDPR N D+YHLMPIITPAYP NS++NVS ST IM
Sbjct: 287 WKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITPAYPQQNSTFNVSVSTRTIMQ 346
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
+ F+ G I E + +A WD LFEP FF YK+Y+ + + A+D W G VES
Sbjct: 347 EAFENGLSITEEIIMGKA--TWDKLFEPPNFFGKYKHYIVLLARSLTAEDQLEWCGLVES 404
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPLYCS-YFMGLQRKQGVPVGEGEQFDI 368
++R L +ER+ + L H +P F + +CS +F+GL + + +DI
Sbjct: 405 KIRHLIGTLERNPHITL-AHVNPEAFPPLEPEPERHCSMWFIGLLFAKSENLNVDLTYDI 463
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALER 428
+ V + ++ K GM I V HV +R+L +V P ++ R GT +
Sbjct: 464 KSFVDSILRQAEQLSMLKEGMWIEVKHVKKRDLHTYVSPSLLKRERKVSGTVHKNGNIAG 523
Query: 429 KVSSHT----KPGADDGRKRKQTDDNVDTHLRNAKCH-ATMPSSSGEFREGSPIMSTISS 483
+S + PG RKR +D N D ++ K + PS + +GS ++ +
Sbjct: 524 NGNSGSVSPRNPGNTTNRKR-LSDQNQDASIKKRKVNDGEQPSVTHHGEDGSLVVQSCGE 582
Query: 484 SS 485
S
Sbjct: 583 DS 584
>gi|170031421|ref|XP_001843584.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
gi|167869844|gb|EDS33227.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
Length = 661
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/433 (43%), Positives = 274/433 (63%), Gaps = 26/433 (6%)
Query: 1 MPRYLPLVLIG----LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEV 56
MP L L G G + VH GADID LCV PR+ R+ D+FG ++L + PEV
Sbjct: 97 MPEALAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERQ-DYFGSFFELLKKQPEV 155
Query: 57 TELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNG 116
TE V +A VPV+K F G+ IDLL+ARL+L IP++ D+ D +L+N D ++VRSLNG
Sbjct: 156 TECRAVEEAFVPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDMLLKNLDPKSVRSLNG 215
Query: 117 CRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA 176
CRVTD+ILRLVP I NFR LR ++ WAK+ G+YSN G+ GG++WA+LVAR CQLYPNA
Sbjct: 216 CRVTDEILRLVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVSWAMLVARTCQLYPNA 275
Query: 177 VPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCM 236
V + LV +FF V+++W+WP PVLL + +LG QVWDPR N +D++HLMPIITPAYP
Sbjct: 276 VAATLVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQ 335
Query: 237 NSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISA 296
NS++NVS+ST ++M++EF RG +I + + +A WD LFE +FF Y++++ + +++
Sbjct: 336 NSTFNVSSSTRKVMLNEFNRGMQITDEIMLGKA--GWDKLFEAPSFFFKYRHFIVLLVTS 393
Query: 297 ENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHP---------HPGDFSDKSKPLYC 346
NADD W G VES++R L +ER+ + N+ +P D + K C
Sbjct: 394 NNADDHLEWCGLVESKIRYLIQNLERNLHINLAHVNPKCFEQQEQNQKDDGGEGGKTTLC 453
Query: 347 S-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNL 401
S +F+GL+ ++ E D+ +++ F AV + + K GM+I HV R+ L
Sbjct: 454 SLWFIGLEFER----SENLNVDLTESIQNFTDAVHKHAVHIKVLKDGMKIEARHVRRKQL 509
Query: 402 PNFVFPGGVRPSR 414
++ P ++ R
Sbjct: 510 NQYLDPNLLKRER 522
>gi|307201288|gb|EFN81136.1| Poly(A) polymerase gamma [Harpegnathos saltator]
Length = 609
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/491 (41%), Positives = 288/491 (58%), Gaps = 24/491 (4%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PRH R D+F ++L EVT+L V +A VPV+K
Sbjct: 103 FGSYRLGVHHKGADIDALCVVPRHIYRS-DYFNSFFELLKMQEEVTDLRAVEEAFVPVIK 161
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ ID+L+A+L+L IP+ +D+ D +L+N D++ VRSLNGCRVTD+ILRLVP I+
Sbjct: 162 MNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIE 221
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAKR G+YSNV G+LGG++WA+LVAR CQLYPNAV + L+ +FF V++Q
Sbjct: 222 NFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKFFLVFSQ 281
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WP PVLL + +LG VWDPR N D+YHLMPIITPAYP NS++NVS ST IM
Sbjct: 282 WKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPIITPAYPQQNSTFNVSVSTRTIMQ 341
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
+ F+ G I E + +A +WD LFEP FF YK+Y+ + + A+D W G VES
Sbjct: 342 EAFENGLSITEEIIMGKA--NWDKLFEPPNFFSKYKHYIVLLARSSTAEDQLEWCGLVES 399
Query: 312 RLRQLTLKIERHTY-NMLQCHPHPGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIR 369
++R L +ER+ + N+ +P D +CS +F+GL + + +DI+
Sbjct: 400 KIRHLIGTLERNPHINLAHVNPEAFPPLDPEPDKHCSMWFIGLLFAKSENLNIDLTYDIK 459
Query: 370 LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERK 429
V+ ++ + K GM I HV R++L +V P ++ R G ++
Sbjct: 460 SFVETIERQAEQINMLKEGMWIEAKHVKRKDLHTYVSPSLLKKERKVSGGVHRNGSIAGN 519
Query: 430 VSSHT----KPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSS 485
+S + PG GRKR +D +D + G+ R + + + +SS
Sbjct: 520 GNSGSVSPRNPGDTTGRKR-LSDQGID--------------ACGKKRRVNEVEEQVENSS 564
Query: 486 INLQFEHMDAN 496
I +Q D+N
Sbjct: 565 IVVQSCGEDSN 575
>gi|260803790|ref|XP_002596772.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
gi|229282032|gb|EEN52784.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
Length = 493
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/405 (47%), Positives = 263/405 (64%), Gaps = 18/405 (4%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VHG GADIDTLCV PRH R DFF +++L + E T++ V +A VPV+K
Sbjct: 87 FGSYRLGVHGAGADIDTLCVAPRHVDRS-DFFSSFYEILKDQKETTDIRGVEEAFVPVIK 145
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F GV +D+L+ARL+L +PED D+ ++ +L+N D++ VRSLNGCRVTD++L LVP +
Sbjct: 146 LDFDGVELDILFARLALPQVPEDQDLREEVLLKNLDQRCVRSLNGCRVTDEMLHLVPNRE 205
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAKRRGVYSNV GFLGG++WA+LVAR CQLYPNA+ S L+ +FF V+++
Sbjct: 206 NFRLALRAIKLWAKRRGVYSNVLGFLGGVSWAMLVARTCQLYPNAIASTLIHKFFLVFSR 265
Query: 192 WRWPNPVLLCAIEEGS-LGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIM 250
W WP PVLL I+E + LG QVWDPR NP D++HLMPIITPAYP NS+YNVS ST IM
Sbjct: 266 WEWPQPVLLKQIDENNRLGFQVWDPRTNPMDRFHLMPIITPAYPQQNSTYNVSLSTRAIM 325
Query: 251 MDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVE 310
+EF+ G ++ + E E WD LFEP +FF YK+Y+ + SA + + W G VE
Sbjct: 326 QEEFKIGLQVTQ--EIFEGKATWDKLFEPGSFFGKYKHYIVLSTSATSKEHHLEWVGLVE 383
Query: 311 SRLRQLTLKIERHTYNMLQCHPHPGDF---SDKSKPLYCSYFMGLQRKQGVPVGEGEQFD 367
S++R L +ER Y L H +P + + + ++F+GLQ + EG D
Sbjct: 384 SKVRILIGNLERTAYIAL-AHVNPKQYPPLNPQEDVFVTNWFIGLQFNK----IEGGNID 438
Query: 368 IRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 407
+ ++ F +QA+S TL K GM+I V R+ L ++ P
Sbjct: 439 LTFEIQSFTDTVHRQAISNGTL-KEGMKIEARSVRRKQLGEYLPP 482
>gi|145354311|ref|XP_001421431.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145354383|ref|XP_001421465.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581668|gb|ABO99724.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581702|gb|ABO99758.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 598
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/475 (42%), Positives = 280/475 (58%), Gaps = 36/475 (7%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFG--------ELHQMLTEMPEVTELH 60
L G + VHGP ADIDTLC+GPRH +REEDFFG + ++ + P +
Sbjct: 95 LYTFGSYRLGVHGPAADIDTLCLGPRHLSREEDFFGWDENDYEGSFYDVMRKHPGTESIV 154
Query: 61 PVPDAHVPVMKFKFSGVSIDLLYARLSLWV-IPEDLDISQDSILQNADEQTVRSLNGCRV 119
PV DA VP +K F G ID+ Y L + +PEDLD+ Q S++ N D+ V+SLNGCRV
Sbjct: 155 PVRDAIVPEIKLVFRGFEIDMAYTSLPSYTHVPEDLDVCQTSVMMNLDDPGVKSLNGCRV 214
Query: 120 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 179
DQ+LR+VP FR LR +R WA+RRGVYSNV GF GG+N A+LVAR+CQLYPNA PS
Sbjct: 215 ADQLLRVVPNHDAFRVALRTLRLWAQRRGVYSNVVGFFGGVNLAILVARVCQLYPNAAPS 274
Query: 180 MLVSRFFRVYTQWRWPNPVLLCAI-EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNS 238
MLV FF++++ W+W PV+L I +EG G++VWD R N ++Y LM I+TPAYP NS
Sbjct: 275 MLVYSFFQLWSAWQWTTPVMLVPIVDEGLPGMRVWDERVNKAERYQLMKILTPAYPAQNS 334
Query: 239 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAEN 298
++NVS STL ++ EF+RG E+ + + N A W+ L+ F E YK+YL + ISA+N
Sbjct: 335 TFNVSVSTLEVLKAEFKRGKEVTKMILLNTA--KWEQLWCSLNFLEKYKHYLMVTISAKN 392
Query: 299 ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD--KSKPLYCSYFMGLQRKQ 356
DD + W+GWV SR++ L IE T + HP + D K + + + F+GL
Sbjct: 393 EDDFKKWEGWVGSRIKLLIQGIENATGGQMLAHPGTSRYKDPEKDENSHVTLFLGLFPSS 452
Query: 357 GVPVGEGEQFDIRLTVKEFKQAVSMYTLRK-------PGMQISVAHVTRRNLPNFV---F 406
E ++ V++F+ V+ + R PGMQ +V ++ R++LP+FV
Sbjct: 453 LKKKEEKVSLNLNPAVEQFQMTVTSWMDRATGESNWVPGMQANVKYLKRKDLPSFVKEEI 512
Query: 407 PGGVR----PSRPSKGTWDSRRALERKVSSHTK-PGADD---GRKRK--QTDDNV 451
G V+ P + K S E+K+S P DD RKRK Q DD++
Sbjct: 513 DGYVKDIYAPEKEKKAA--SAEDEEKKISEEKPLPLGDDTKAARKRKEMQEDDSI 565
>gi|403415037|emb|CCM01737.1| predicted protein [Fibroporia radiculosa]
Length = 626
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/473 (41%), Positives = 278/473 (58%), Gaps = 43/473 (9%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCV P+H TRE DFF L +ML E VTE+ VP+A+VP
Sbjct: 85 IFTFGSYRLGVHGPGSDIDTLCVVPKHVTRE-DFFDVLEEMLKETEGVTEVSGVPEAYVP 143
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K K +G+ IDL ARL+L IP+DL + D++L+N DE+ VRSLNG RVTD+ILRLVP
Sbjct: 144 IIKTKINGIPIDLTMARLALSSIPDDLSLQDDNLLRNLDERCVRSLNGSRVTDEILRLVP 203
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR +LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQLYPNA+ +VSRFF +
Sbjct: 204 NVTVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNAIAGAIVSRFFII 263
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QW WP PVLL IEEG L ++VW+P+ P D+ H MPIITPAYP M +++NV+ ST
Sbjct: 264 MYQWSWPQPVLLKQIEEGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATHNVTASTQM 323
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +EF++G EI + + A +W LF FF ++ YL++ S N+D W G
Sbjct: 324 IMTEEFKKGSEIVDKVIVGTA--EWSELFAKHDFFHKHRYYLQVIASTGNSDLQIKWSGT 381
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL------------------------ 344
VESR+RQL +K+E + +++ HP F S +
Sbjct: 382 VESRIRQLVMKLE-YVESLILAHPFIKGFEQVSHCISSEEVRAVAQGEVSEAVSKRRKED 440
Query: 345 -----------YCSYFMGLQRKQGVPVGEG-EQFDIRLTVKEFKQAVSMY-TLRKPGMQI 391
++++GL + +P G + DI EF + V M+ + M I
Sbjct: 441 IEGKEGASTVYSTTFYIGLLIEPKLPGSSGPRKLDISYPTTEFTKLVKMWEKYDEAKMGI 500
Query: 392 SVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKR 444
V H+ LP++V+ G R R ++ S + ++ S+ T P + ++R
Sbjct: 501 IVRHIKSTALPDYVYDEGERQPRSAQKRVKSGKGSDK--SNGTSPDMPNKKRR 551
>gi|383862407|ref|XP_003706675.1| PREDICTED: poly(A) polymerase gamma [Megachile rotundata]
Length = 616
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/447 (43%), Positives = 270/447 (60%), Gaps = 10/447 (2%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PRH R D+F +L EVT+L V +A VPV+K
Sbjct: 107 FGSYRLGVHHKGADIDALCVVPRHIYRS-DYFSSFFDLLKMQEEVTDLRAVEEAFVPVIK 165
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ ID+L+A+L+L IP+ +D+ D +L+N D++ VRSLNGCRVTD+ILRLVP I+
Sbjct: 166 MNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIE 225
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAKR G+YSNV G+LGG++WA+LVAR CQLYPNAV + L+ +FF V++Q
Sbjct: 226 NFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKFFLVFSQ 285
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WP PVLL + +LG VWDPR N D+YHLMPIITPAYP NS++NVS ST IM
Sbjct: 286 WKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITPAYPQQNSTFNVSVSTRTIMQ 345
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
+ F+ G I E + +A WD LFEP FF YK+Y+ + + +A+D W G VES
Sbjct: 346 EAFETGLSITEEIIMGKA--TWDKLFEPPNFFGKYKHYIVLLARSLSAEDQLEWCGLVES 403
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPLYCS-YFMGLQRKQGVPVGEGEQFDI 368
++R L +ER+ + L H +P F + +CS +F+GL + + +DI
Sbjct: 404 KIRHLIGTLERNPHITL-AHVNPEAFPPLEPEPEGHCSMWFIGLLFAKSENLNVDLTYDI 462
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT---WDSRRA 425
+ V ++ ++ K GM I HV R++L +V P +R R G+ +
Sbjct: 463 KSFVDSIQRQAEQLSVLKEGMWIEAKHVKRKDLHTYVSPSLLRRERKVSGSVHKNGNIAG 522
Query: 426 LERKVSSHTKPGADDGRKRKQTDDNVD 452
S + AD +++ +D N D
Sbjct: 523 NGNNGSVSPRNQADAANRKRGSDQNAD 549
>gi|307183537|gb|EFN70300.1| Poly(A) polymerase gamma [Camponotus floridanus]
Length = 603
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 187/410 (45%), Positives = 258/410 (62%), Gaps = 7/410 (1%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PRH R D+F ++L EVT+L V +A VPV+K
Sbjct: 107 FGSYRLGVHHKGADIDALCVVPRHIYRS-DYFATFFELLKMQEEVTDLRAVEEAFVPVIK 165
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ ID+L+A+L+L IP+ +D+ D +L+N D++ VRSLNGCRVTD+ILRLVP I+
Sbjct: 166 MNFDGIEIDMLFAKLTLKEIPDSMDLKDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIE 225
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAKR G+YSNV G+LGG++WA+LVAR CQLYPNAV + L+ +FF V++Q
Sbjct: 226 NFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKFFLVFSQ 285
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WP PVLL + +LG VWDPR N D+YHLMPIITPAYP NS++NVS ST IM
Sbjct: 286 WKWPQPVLLKQPDNVNLGYPVWDPRVNVSDRYHLMPIITPAYPQQNSTFNVSVSTRTIMQ 345
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
+ F+ G I E + +A WD LFEP FF YK+Y+ + + +A+D W G VES
Sbjct: 346 EAFENGLAITEEIIIGKA--TWDKLFEPPNFFGKYKHYIVLLARSSSAEDQLEWCGLVES 403
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPLYCS-YFMGLQRKQGVPVGEGEQFDI 368
++R L +ER+ + L H +P F D +CS +F+GL + + +DI
Sbjct: 404 KIRHLIGTLERNPHITL-AHVNPEAFPPLDPEPGKHCSMWFIGLSFAKSESLNIDLTYDI 462
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKG 418
+ V+ ++ ++ K GM I HV R++L +V V+ R G
Sbjct: 463 KSFVETIERQAEQISMLKEGMWIEAKHVKRKDLHTYVSSSLVKRERKVSG 512
>gi|449549561|gb|EMD40526.1| hypothetical protein CERSUDRAFT_80191 [Ceriporiopsis subvermispora
B]
Length = 629
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 211/526 (40%), Positives = 295/526 (56%), Gaps = 64/526 (12%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCV P+H +RE DFF +ML E VTE VPDA+VP
Sbjct: 85 IFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DFFEVFEEMLKETEGVTEASGVPDAYVP 143
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K K SG+ +DLL ARL+L IP+DL + D++L+N DE+ VRSLNG RVTD+ILRLVP
Sbjct: 144 ILKAKISGIPLDLLMARLALSAIPDDLSLQDDNLLRNLDERCVRSLNGSRVTDEILRLVP 203
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR +LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQLYPNA+ +VSRFF +
Sbjct: 204 NVSVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNAIAGAIVSRFFII 263
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QW WP PVLL IE+G L ++VW+P+ P D+ H MPIITPAYP M +++NVS ST
Sbjct: 264 MYQWSWPQPVLLKQIEDGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATHNVSASTQM 323
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +EF++G EI + + +A +W LF FF Y+ YL++ S + + W G
Sbjct: 324 IMTEEFKKGSEIVDKVIVGKA--NWSELFAKHDFFHKYRYYLQVIASTGSQELQTKWAGT 381
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF------------------------------- 337
VESR+RQL +K+E + ++ HP F
Sbjct: 382 VESRIRQLVMKLE-YVDSLTLAHPFIKGFEQVSCCLSDEEVRAVAQGEISEVIAKRKKED 440
Query: 338 ---SDKSKPLYCSYF---MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY-TLRKPGMQ 390
D + +Y + F + ++ KQ VG + DI EF + V M+ M
Sbjct: 441 IEGKDGASTVYSTTFYIGLAIEPKQPGAVGP-RKLDISYPTTEFTKLVKMWEKYDDSTMG 499
Query: 391 ISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDN 450
I V H+ LP++VF G R R ++ + + ++ S++T P D K+++ ++
Sbjct: 500 IVVRHIKSTALPDYVFEPGERQPRSAQKRPKTSKNADK--SNNTSP--DMPNKKRRASNS 555
Query: 451 VDTHLRNAKCHATMPSSSGEFREG-----------SPIMSTISSSS 485
V L AT P F+ SPI T +SSS
Sbjct: 556 VSESL------ATTPLPPQPFKTAQNGVTSTAAIPSPIALTAASSS 595
>gi|294460282|gb|ADE75723.1| unknown [Picea sitchensis]
Length = 554
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/417 (45%), Positives = 264/417 (63%), Gaps = 23/417 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGP ADID LCVGP +AT E+DFF L+ ML + EV+E+ V A+VP
Sbjct: 118 IFTFGSYQLGVHGPEADIDALCVGPCYATLEDDFFIVLYNMLKKTAEVSEVQCVKSANVP 177
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+M+FKFSG+SIDLLYARLSL IPED+DI + +L+N D+ TV+SLNGCRVT +IL+LVP
Sbjct: 178 LMRFKFSGISIDLLYARLSLRTIPEDMDILDEKLLENLDDTTVKSLNGCRVTARILQLVP 237
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
KI+NFR+TLRC++FWAKRRG+YS++ GFLGGI+WA+LVAR+CQ++PNA SMLVSRFF +
Sbjct: 238 KIENFRSTLRCIKFWAKRRGIYSHIFGFLGGIHWAVLVARVCQMFPNATVSMLVSRFFWI 297
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y W+WP PV L + + D++H MPII P +P SYNV+ STL+
Sbjct: 298 YAHWQWPTPVTLVETQPD---------HADGSDRHHHMPIIIPVHPYSCCSYNVTRSTLQ 348
Query: 249 IMMDEFQRGHEICEAMEKNEADV----DWDTLFEPFTFFEAYKNYLRIDISAENADDLRN 304
+ EF RG + ME + DW+ LFE F F +Y+ +++I ++A + DD R+
Sbjct: 349 KLKSEFSRGWDAIMKMETKWGTLPNSGDWNILFERFPFCSSYEYFIQIYVTASDEDDFRS 408
Query: 305 WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCSYFMGLQRKQGVPVGEG 363
W+GWVESR R L LK E+ C P+P + DK+ K +C + GL+ ++ + V
Sbjct: 409 WRGWVESRFRHLLLKFEKLP---AYCDPNPYPYFDKNVKEPHCYFLWGLKLRKNISVDMA 465
Query: 364 EQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTW 420
+ D EF+ +S +PG + + + R LP+F + SK W
Sbjct: 466 DLED------EFRLYLSNGYEGRPGCDVHLTLLNRFQLPSFANSKSSELRQHSKPYW 516
>gi|340709674|ref|XP_003393427.1| PREDICTED: poly(A) polymerase gamma-like [Bombus terrestris]
Length = 617
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 190/410 (46%), Positives = 257/410 (62%), Gaps = 7/410 (1%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PRH R D+F ++L EVT+L V +A VPV+K
Sbjct: 108 FGSYRLGVHHKGADIDALCVVPRHIYRS-DYFASFFELLKMQEEVTDLRAVEEAFVPVIK 166
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ ID+L+A+LSL IP+ +D+ D +L+N D++ VRSLNGCRVTD+ILRLVP I+
Sbjct: 167 MNFDGIEIDMLFAKLSLKEIPDSMDLKDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIE 226
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAKR G+YSNV G+LGG++WA+LVAR CQLYPNAV + L+ +FF V++Q
Sbjct: 227 NFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKFFLVFSQ 286
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WP PVLL + +LG VWDPR N D+YHLMPIITPAYP NS++NVS ST IM
Sbjct: 287 WKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPIITPAYPQQNSTFNVSVSTRTIMQ 346
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
+ F+ G I E + +A WD LFEP FF YK+Y+ + + A+D W G VES
Sbjct: 347 EAFENGLSITEEIIMGKA--TWDKLFEPPNFFGKYKHYIVLLARSLTAEDQLEWCGLVES 404
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSD-KSKPL-YCS-YFMGLQRKQGVPVGEGEQFDI 368
++R L +ER+ + L H +P F K +P +CS +F+GL + + +DI
Sbjct: 405 KIRHLIGTLERNPHITL-AHVNPEAFPPLKPEPEGHCSMWFIGLLFAKSENLNIDLTYDI 463
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKG 418
+ V + L K GM I HV R++L +V P ++ R G
Sbjct: 464 KSFVDSILRQAEQLNLLKDGMWIEAKHVKRKDLHTYVSPSLLKRERKISG 513
>gi|350422462|ref|XP_003493171.1| PREDICTED: poly(A) polymerase gamma-like [Bombus impatiens]
Length = 610
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 190/410 (46%), Positives = 257/410 (62%), Gaps = 7/410 (1%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PRH R D+F ++L EVT+L V +A VPV+K
Sbjct: 104 FGSYRLGVHHKGADIDALCVVPRHIYRS-DYFASFFELLKMQEEVTDLRAVEEAFVPVIK 162
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ ID+L+A+LSL IP+ +D+ D +L+N D++ VRSLNGCRVTD+ILRLVP I+
Sbjct: 163 MNFDGIEIDMLFAKLSLKEIPDSMDLKDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIE 222
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAKR G+YSNV G+LGG++WA+LVAR CQLYPNAV + L+ +FF V++Q
Sbjct: 223 NFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKFFLVFSQ 282
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WP PVLL + +LG VWDPR N D+YHLMPIITPAYP NS++NVS ST IM
Sbjct: 283 WKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPIITPAYPQQNSTFNVSVSTRTIMQ 342
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
+ F+ G I E + +A WD LFEP FF YK+Y+ + + A+D W G VES
Sbjct: 343 EAFENGLSITEEIIMGKA--TWDKLFEPPNFFGKYKHYIVLLARSLTAEDQLEWCGLVES 400
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSD-KSKPL-YCS-YFMGLQRKQGVPVGEGEQFDI 368
++R L +ER+ + L H +P F K +P +CS +F+GL + + +DI
Sbjct: 401 KIRHLIGTLERNPHITL-AHVNPEAFPPLKPEPEGHCSMWFIGLLFAKSENLNIDLTYDI 459
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKG 418
+ V + L K GM I HV R++L +V P ++ R G
Sbjct: 460 KSFVDSILRQAEQLNLLKDGMWIEAKHVKRKDLHTYVSPSLLKRERKISG 509
>gi|47221727|emb|CAG10199.1| unnamed protein product [Tetraodon nigroviridis]
Length = 685
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 227/586 (38%), Positives = 328/586 (55%), Gaps = 54/586 (9%)
Query: 23 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHP---VPDAHVPVMKFKFSGVSI 79
GADID LCV PRH R DFF + L + E+ +L V DA VPV+KFKF G+ I
Sbjct: 109 GADIDALCVAPRHVERT-DFFQSFFEKLKQHEEIKDLRVCLCVEDAFVPVIKFKFDGIEI 167
Query: 80 DLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 139
DLL+ARL+L IP++LD+ DSIL+N D + +RSLNGCRVTD+IL LVP +NFR TLR
Sbjct: 168 DLLFARLALPSIPDNLDLRGDSILKNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRA 227
Query: 140 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVL 199
++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNAV + LV +FF V+++W WPNPVL
Sbjct: 228 IKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVL 287
Query: 200 LCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE 259
L E+ +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST IM +EF+ G
Sbjct: 288 LKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLS 347
Query: 260 ICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLK 319
+ + + + +A +W LFEP FF+ YK+Y+ + SA ++ W G VES++R L
Sbjct: 348 VTDEILQGKA--EWSKLFEPPHFFQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGN 405
Query: 320 IERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEF 375
+ER+ Y + +P PG ++++ + S +F+G+ K+ V E D+ ++ F
Sbjct: 406 LERNEYITLAHVNPQSFPGSKENRNENEFVSMWFIGIIFKK-VENAESVNIDLTYDIQSF 464
Query: 376 KQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVS 431
V + + K GM+I HV ++ L N P + + + D R+ S
Sbjct: 465 TDTVYRQANNINMLKNGMKIEATHVKKKQL-NLYLPPELVQKKKRQSIADLNRSSNGGSS 523
Query: 432 SHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE---------FREGSPIMSTIS 482
+ + TD T + C + P+S E F E SP S
Sbjct: 524 KRISLDSSHLDSSRDTD--TGTPFSSPPCKVSKPASDTEDSVSPPKKLFVEDSP----AS 577
Query: 483 SSSINLQFEHMDANELAGSNREKVENNL--------------TDSIRGSRNSVEVSSHNG 528
S++ + Q + M +AGS++ ++ L +++ R +NS++++ +
Sbjct: 578 SAAPDAQDQGMSV-PVAGSSQPFLKWRLPSMELPDASSPLPASNTCRVVKNSIKLALNRH 636
Query: 529 KVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPL 574
+ P P +G + S D + EK MS P + F L
Sbjct: 637 SITPP---KPPAEG-----ALSTDDVPASEEKGMSIPVIGSSTFCL 674
>gi|303282577|ref|XP_003060580.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458051|gb|EEH55349.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 656
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 183/420 (43%), Positives = 254/420 (60%), Gaps = 23/420 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGE--------LHQMLTEMPEVTELH 60
L G + VHGP ADIDTLC+GPRH +R EDFFG + + P +
Sbjct: 62 LYTFGSYRLGVHGPAADIDTLCIGPRHLSRSEDFFGSEWTEYEGSFYLAMKNHPGTDRIV 121
Query: 61 PVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSLNGCRV 119
VPDA VP +K F G +D+ Y L S +PEDLD+ Q SILQN D+ +V+SLNGCRV
Sbjct: 122 AVPDAVVPELKLIFRGFEVDMAYTSLPSFIAVPEDLDVCQTSILQNLDDASVKSLNGCRV 181
Query: 120 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 179
DQ+LRLVP +FR LR +R WA+ RGVYSNV GF GG+N A+LVAR+CQLYPNA S
Sbjct: 182 ADQLLRLVPNHASFRIALRALRVWARERGVYSNVQGFFGGVNLAILVARVCQLYPNAAAS 241
Query: 180 MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSS 239
MLV FF+++ W+W PV+L AI + GL+VWD R N +++ LM IITPAYP NS+
Sbjct: 242 MLVYSFFQLWDAWQWTTPVMLTAIIDEGHGLRVWDERVNKAERFQLMKIITPAYPAQNST 301
Query: 240 YNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA 299
+NV+ STL ++ EF+RG E C + + W++L+EP FF +K+YL++ + A
Sbjct: 302 FNVTHSTLHVLKREFKRGRETCAKILMGQ--TKWESLWEPLPFFTMHKHYLQVTMCAITE 359
Query: 300 DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSK--PLYCSYFMGLQRKQG 357
DD + W+GWV SRLR L +E + L HP+P D +K L+C Y++GL
Sbjct: 360 DDFKKWEGWVHSRLRMLVQAVETCSGGALIAHPYPERKQDPAKDSALHCIYYIGLGPAPP 419
Query: 358 VPVGEGEQ---FDIRLTVKEFKQAVSMYTLR-------KPGMQISVAHVTRRNLPNFVFP 407
G ++ V++F+ V+ + R +PGM++ V H+ R+++P + P
Sbjct: 420 PTTGGPAPRGTLNLNPAVEQFQMLVTSWVNRADGTVQWQPGMEVHVKHMKRKDVPAWAIP 479
>gi|330796347|ref|XP_003286229.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
gi|325083816|gb|EGC37259.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
Length = 671
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 189/409 (46%), Positives = 255/409 (62%), Gaps = 28/409 (6%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGP +DIDTLCVGP+H R DFF +L + L PE+TE V DA VP
Sbjct: 123 IFTFGSYRLGVHGPNSDIDTLCVGPKHIMRS-DFFDDLSESLKTHPEITEFTTVKDAFVP 181
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
V+ FSGV IDL+YARLSL IPE+L D+ + L+N DE+++ SLNGCRV DQIL+LV
Sbjct: 182 VINMVFSGVPIDLIYARLSLTAIPEELNDLIDEGYLKNVDEKSILSLNGCRVADQILKLV 241
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P I NFR LRC++ WA FLGGI WALL ARICQLYPN+ PS +++RFF+
Sbjct: 242 PNIPNFRMALRCIKLWA---------ISFLGGITWALLTARICQLYPNSAPSTIINRFFK 292
Query: 188 VYTQWRWPNPVLLC-AIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
VY W+WP PVLL +E G+L +VW+ +R DK HLMPI+TPAYP MNS+YNVS ST
Sbjct: 293 VYENWKWPAPVLLTHLVEGGALAAKVWNAKR---DKAHLMPILTPAYPMMNSTYNVSKST 349
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
++++ +EF RG EI +E NE+ ++ L E FF Y+ Y++ID SA N +D R W+
Sbjct: 350 MQLLKNEFVRGAEITRKIETNES--TYNALLEKSDFFTRYRFYIQIDCSAGNEEDHRKWE 407
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD----KSKP--LYCSYFMGLQRKQGVPV 360
GW+ES+LR L +E T M P P FS+ +S P + ++FMGL
Sbjct: 408 GWIESKLRFLISNLE-MTPKMKYAVPFPKSFSNLIHKESHPDQICTTFFMGLVFNFPTTP 466
Query: 361 GEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ----ISVAHVTRRNLPNFV 405
G + D+ V EF + + +P + I V ++ ++ LP+F+
Sbjct: 467 GADKSVDLTKAVSEFTSTIKEWLRTQPNPETMADIKVQYIKKKQLPSFI 515
>gi|405945155|gb|EKC17170.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 745
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 183/425 (43%), Positives = 261/425 (61%), Gaps = 16/425 (3%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADIDTLCV PRH R DFF ++L PEV +L V +A VPV+K
Sbjct: 98 FGSYRLGVHTKGADIDTLCVAPRHVDRS-DFFSSFFEILKNTPEVKDLRAVEEAFVPVIK 156
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ +D+L+ARL+L IPE++D+ +S+L+N +E+ VRSLNGCRVTD+IL LVP
Sbjct: 157 MTFDGIELDMLFARLALPQIPEEIDLRDESLLKNLNEKCVRSLNGCRVTDEILHLVPNQH 216
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
+FR TLR ++ WAK++G+YSN GFLGG++WA+LVAR+CQLYPNA P+ L+ +FF + +
Sbjct: 217 SFRMTLRAIKLWAKKKGIYSNALGFLGGVSWAMLVARVCQLYPNAAPATLLHKFFMIIHK 276
Query: 192 WRWPNPVLLCAI---EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
W WP PVLL A+ + +L VWDPR N D++HLMPIITPAYP NS++NV+ ST
Sbjct: 277 WNWPQPVLLKALVHENKFNLSFPVWDPRVNTSDRFHLMPIITPAYPQQNSTFNVTLSTRS 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +E + G EI + E +W LFEP FF+ YK+Y+ + SA D W G+
Sbjct: 337 IMTEELKDGLEIVSKI--YEGREEWGALFEPSNFFQKYKHYIVLTASAVEEKDYLEWHGY 394
Query: 309 VESRLRQLTLKIERH-TYNMLQCHPHP-GDFSDKSKPLYCSYFMGLQRKQGVPV-GEGEQ 365
VES++R L +ER+ + HP P G ++ C +F+GL V + + +
Sbjct: 395 VESKIRLLVGNLERNPCIKLAHVHPSPLGPLNESDGEYLCRWFIGL---TFVKIENQNQN 451
Query: 366 FDIRLTVKEFKQAVSMYT----LRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWD 421
D+ ++ F V + L K GM++ + HV RR L +V P + S+ + +
Sbjct: 452 VDLTFDIQSFTNTVHKHAYHINLMKDGMKVEIKHVKRRQLDLYVPPKILLQSKRAAVAQE 511
Query: 422 SRRAL 426
R ++
Sbjct: 512 HRSSI 516
>gi|347969786|ref|XP_003436462.1| AGAP013207-PA [Anopheles gambiae str. PEST]
gi|333469270|gb|EGK97235.1| AGAP013207-PA [Anopheles gambiae str. PEST]
Length = 725
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 184/420 (43%), Positives = 271/420 (64%), Gaps = 24/420 (5%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PR+ R D+FG ++L + PEVTE V +A VPV+K
Sbjct: 102 FGSYRLGVHHKGADIDALCVAPRNIERA-DYFGSFFELLKQQPEVTECRAVEEAFVPVIK 160
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ IDLL+ARL+L IP++ D+ D +L+N D+++VRSLNGCRVTD+ILRLVP I
Sbjct: 161 MNFDGIEIDLLFARLALKEIPDNFDLRDDMLLKNLDQKSVRSLNGCRVTDEILRLVPNID 220
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAKR G+YSN G+ GG++WA+LVAR CQLYPNAV + LV +FF V+++
Sbjct: 221 NFRLALRTIKLWAKRHGIYSNSLGYFGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSR 280
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WP PVLL + +LG QVWDPR N +D++HLMPIITPAYP NS++NVS+ST ++M+
Sbjct: 281 WKWPQPVLLKQPDNVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNSTFNVSSSTRKVML 340
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
EF RG +I + + + W+ LFE +FF Y++++ + +++ NADD W G VES
Sbjct: 341 MEFNRGMQITDDIMMGKQ--MWEKLFEAPSFFYRYRHFIVLLVTSSNADDHLEWCGLVES 398
Query: 312 RLRQLTLKIERHTY-NMLQCHPHPGDFSDKS----------KPL-YCS-YFMGLQRKQGV 358
++R L +ER+ + N+ +P + +++ KP +CS +F+GL+ ++
Sbjct: 399 KIRYLIQNLERNQHINLAHVNPKCYEQHEQNSATTLNGADGKPTPFCSLWFIGLEFER-- 456
Query: 359 PVGEGEQFDIRLTVKEFKQAVSMYT----LRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 414
E D+ +++ F +V + L K GM+I HV R+ L ++ P ++ R
Sbjct: 457 --SENLNVDLTESIQSFTDSVHKHAVHIKLLKDGMKIEARHVRRKQLTQYLDPNLLKRER 514
>gi|393215900|gb|EJD01391.1| poly polymerase [Fomitiporia mediterranea MF3/22]
Length = 629
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 192/445 (43%), Positives = 260/445 (58%), Gaps = 47/445 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCV P+H +RE DFF ML E+ V+E+ VP+A+VP
Sbjct: 87 IFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DFFEVFEPMLREVEGVSEVSGVPEAYVP 145
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K K G+ ID L ARL+L IP+DL + D++L+N DE+ +RSLNG RVTD+ILRLVP
Sbjct: 146 IIKIKIQGIPIDFLMARLALSSIPDDLSLRDDNLLKNLDERCIRSLNGSRVTDEILRLVP 205
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQLYPNAV +VSRFF +
Sbjct: 206 NVAVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNAVAGAIVSRFFII 265
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QW WP PVLL IEEG L ++VW+PR P D+ H MPIITPAYP M +++NV+ ST
Sbjct: 266 MYQWSWPQPVLLKQIEEGPLQVRVWNPRLYPGDRSHRMPIITPAYPAMCATHNVTESTQM 325
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +EF+RG +I + + + W LF FF Y+ YL+I S N D W G
Sbjct: 326 IMTEEFKRGADIVDKIVF--GSLQWSALFAKHDFFHKYRYYLQIIASTGNPDLQIKWAGT 383
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC---------------------- 346
VESR+RQL +K+E + + HP F + L+C
Sbjct: 384 VESRIRQLVMKLE-YVDALTLAHPFIKGF---DQTLHCLNDEEVRLCASGEVPEAVLRRK 439
Query: 347 ----------------SYFMGLQRKQGVPVGEG-EQFDIRLTVKEFKQAVSMY-TLRKPG 388
++F+GL + P G + DI EF + V M+ +
Sbjct: 440 KEEAEGKEGASTVHTTTFFIGLAIEPKQPGSTGPRRLDISYPTTEFTKLVKMWDKYDESS 499
Query: 389 MQISVAHVTRRNLPNFVFPGGVRPS 413
M I V H+ +LP++VF G +P+
Sbjct: 500 MGIVVRHIKNSSLPDYVFEEGAKPN 524
>gi|354473991|ref|XP_003499215.1| PREDICTED: poly(A) polymerase gamma [Cricetulus griseus]
Length = 739
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 181/406 (44%), Positives = 258/406 (63%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F +K+ +F+G+ ++ V EG
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHNKANNYVSMWFLGIIFRR-VEHAEG 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V ++ + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANIINMLKDGMKIEATHVKKKQLHHYL 496
>gi|344245697|gb|EGW01801.1| Poly(A) polymerase gamma [Cricetulus griseus]
Length = 709
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 181/406 (44%), Positives = 258/406 (63%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 88 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 146
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 147 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 206
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 207 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 266
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 267 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 326
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 327 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 384
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F +K+ +F+G+ ++ V EG
Sbjct: 385 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHNKANNYVSMWFLGIIFRR-VEHAEG 442
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V ++ + K GM+I HV ++ L +++
Sbjct: 443 VNIDLTYDIQSFTDTVYRQANIINMLKDGMKIEATHVKKKQLHHYL 488
>gi|332018332|gb|EGI58937.1| Poly(A) polymerase gamma [Acromyrmex echinatior]
Length = 553
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 189/420 (45%), Positives = 261/420 (62%), Gaps = 16/420 (3%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PRH R+ D+F +L EVT+L V +A VPV+K
Sbjct: 105 FGSYRLGVHHKGADIDALCVVPRHIYRQ-DYFTSFFDLLKMQEEVTDLRAVEEAFVPVIK 163
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ ID+L+A+L+L IP+ +D+ D +L+N D++ VRSLNGCRVTD+ILRLVP I+
Sbjct: 164 MNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIE 223
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAKR G+YSNV G+LGG++WA+LVAR CQLYPNAV + L+ +FF V++Q
Sbjct: 224 NFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKFFLVFSQ 283
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WP PVLL + +LG VWDPR N D+YHLMPIITPAYP NS++NVS ST IM
Sbjct: 284 WKWPQPVLLKQPDNVNLGYPVWDPRVNVADRYHLMPIITPAYPQQNSTFNVSVSTRTIMQ 343
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
+ F+ G I E + +A WD LFEP FF YK+Y+ + + +A+D W G VES
Sbjct: 344 EAFENGLAITEEIIMGKA--TWDKLFEPPNFFGKYKHYIVLLAKSLSAEDQLEWCGLVES 401
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPLYCS-YFMGL-----QRKQGVPVGEG 363
++R L +ER+ + L H +P F + +CS +F+GL ++ + GE
Sbjct: 402 KIRHLIGMLERNPHITL-AHVNPEAFPPLNPESGKHCSMWFIGLAFSKCEKSEKSEKGEN 460
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 419
D+ +K F V + K GM I HV R++L +V P ++ R ++ T
Sbjct: 461 INVDLTYDIKSFVDTVERQAEQINMFKEGMWIEAKHVKRKDLHTYVSPSLLKKERKAENT 520
>gi|291386749|ref|XP_002709901.1| PREDICTED: poly(A) polymerase gamma [Oryctolagus cuniculus]
Length = 739
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 190/444 (42%), Positives = 267/444 (60%), Gaps = 16/444 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 419
D+ ++ F V + + K GM+I HV ++ L ++ P + + +
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHY-LPAEILQKKKKQSL 509
Query: 420 WD-SRRALERKVSSHTKPGADDGR 442
D SR L+ K SS D R
Sbjct: 510 SDVSRSGLQSKRSSLDSNCLDSSR 533
>gi|427788767|gb|JAA59835.1| Putative polya polymerase [Rhipicephalus pulchellus]
Length = 817
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 185/398 (46%), Positives = 249/398 (62%), Gaps = 9/398 (2%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADIDTLCV PRH R DFF ++L + EV +L V +A VPV+K
Sbjct: 120 FGSYRLGVHTKGADIDTLCVAPRHIERS-DFFASFVELLRQQEEVKDLRAVEEAFVPVIK 178
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ +D+L+ARL+L IPED D+ +IL+N D++ VRSLNGCRVTD+IL LVP +
Sbjct: 179 MTFDGIELDMLFARLALKDIPEDQDLRDVNILKNLDQKCVRSLNGCRVTDEILHLVPNRE 238
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
FR LR ++ WAKR GVYSNV G+LGG++WA+LVAR CQLYPNA + LV +FF V++Q
Sbjct: 239 TFRLALRAIKLWAKRHGVYSNVLGYLGGVSWAMLVARTCQLYPNAAAATLVHKFFLVFSQ 298
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W WP PVLL EE LG VWDPR N D++HLMPIITPAYP NS++NVS STL IM
Sbjct: 299 WPWPKPVLLKQPEESRLGFPVWDPRVNVADRFHLMPIITPAYPQQNSTFNVSVSTLTIMR 358
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
EF++G I + + + DW LFEP FF YK+++ + S ++ + W G VES
Sbjct: 359 QEFKQGLAITDEIMLRRS--DWMKLFEPPNFFGKYKHFIVLMASTQSKEHHLEWYGLVES 416
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP----LYCSYFMGLQRKQGVPVGEGEQFD 367
++R L +ERH Y + H +P F S+P L +F+GLQ + V +D
Sbjct: 417 KIRILISNLERHPYIAI-AHVNPESFP-PSEPEGDKLQSMWFIGLQFNKTEHVNIDLTYD 474
Query: 368 IRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 405
R V K+ + + K M++ + +V RR L ++
Sbjct: 475 TRSFVDTVKRQATAINIFKQDMEVDIKYVRRRELVRYL 512
>gi|296223786|ref|XP_002757774.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Callithrix jacchus]
Length = 736
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 184/427 (43%), Positives = 262/427 (61%), Gaps = 15/427 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGSKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 419
D+ ++ F V + + K GM+I HV ++ L +++ P + + +
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-PAEILQKKKKQSL 509
Query: 420 WDSRRAL 426
D R+L
Sbjct: 510 SDVSRSL 516
>gi|322802531|gb|EFZ22846.1| hypothetical protein SINV_14294 [Solenopsis invicta]
Length = 592
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 188/415 (45%), Positives = 256/415 (61%), Gaps = 16/415 (3%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PRH R D+F +L EVT+L V +A VPV+K
Sbjct: 95 FGSYRLGVHHKGADIDALCVVPRHIYRA-DYFTSFFDLLRMQEEVTDLRAVEEAFVPVIK 153
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ ID+L+A+L+L IP+ +D+ D +L+N D++ VRSLNGCRVTD+ILRLVP I+
Sbjct: 154 MNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIE 213
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAKR G+YSNV G+LGG++WA+LVAR CQLYPNAV + L+ +FF V++Q
Sbjct: 214 NFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKFFLVFSQ 273
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WP PVLL + +LG VWDPR N D+YHLMPIITPAYP NS++NVS ST IM
Sbjct: 274 WKWPQPVLLKQPDNVNLGYPVWDPRVNVSDRYHLMPIITPAYPQQNSTFNVSISTRTIMQ 333
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
+ F+ G I E + +A WD LFEP FF YK+Y+ + + A+D W G VES
Sbjct: 334 EAFENGLAITEEIIMGKA--TWDKLFEPPNFFGKYKHYIVLLAKSLTAEDQLEWCGLVES 391
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPLYCS-YFMGL-----QRKQGVPVGEG 363
++R L +ER+ + L H +P F + +CS +F+GL ++ + GE
Sbjct: 392 KIRHLIGMLERNPHITL-AHVNPEAFPPLNPESGKHCSMWFIGLSFSKCEKSEKSEKGEN 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 414
D+ +K F V + K GM I HV R++L +V P ++ R
Sbjct: 451 INVDLTYDIKSFVDTVERQAEQINMFKEGMWIEAKHVKRKDLNTYVSPSLLKRER 505
>gi|395329949|gb|EJF62334.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 628
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 199/481 (41%), Positives = 271/481 (56%), Gaps = 60/481 (12%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCV P+H +RE DFF ML + V E+ VPDA+VP
Sbjct: 90 IFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DFFDVFEHMLKDAEGVAEVSGVPDAYVP 148
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K K SG+ IDL+ ARL+L IP+DL + D++L+N D++ VRSLNG RVTD+ILRLVP
Sbjct: 149 IIKIKMSGIPIDLVMARLALSTIPDDLSLQDDNLLRNLDDRCVRSLNGSRVTDEILRLVP 208
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR +LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQLYPNAV +VSRFF +
Sbjct: 209 NVSVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNAVAGAIVSRFFII 268
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QW WP PVLL IE+G L ++VW+P+ P D+ H MPIITPAYP M +++NV+ ST
Sbjct: 269 MYQWAWPQPVLLKQIEDGPLPVRVWNPKSYPADRAHRMPIITPAYPSMCATHNVTQSTQM 328
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +EF++ EI + + N+A W LF FF Y+ YL++ S + + W G
Sbjct: 329 IMTEEFKKASEIVDKVIINKA--SWSDLFARHDFFHKYRYYLQVIASTGSPELQVKWSGT 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC---------------------- 346
VESR+RQL +K+E + ++ HP F S YC
Sbjct: 387 VESRVRQLVMKLE-YVESLALAHPFIKGFEQVS---YCINDEEVRSVAQGEVSEAVARRK 442
Query: 347 ----------------SYFMGLQRKQGVPVGEG-EQFDIRLTVKEFKQAVSMY-TLRKPG 388
++++GL + P G + DI EF + V M+ +
Sbjct: 443 KEDIEGIEGASAVYSTTFYIGLAVEPKQPGAVGPRRLDISYPTTEFTKLVKMWEKFDEQK 502
Query: 389 MQISVAHVTRRNLPNFVFPGGVR-----PSRPSKGTWDSRRALERKVSSHTKPGADDGRK 443
M I V H+ LP +VF G R RP K T D SS+T P + +
Sbjct: 503 MGIVVRHIKSSALPEYVFDDGERQPRLAQKRPKKETTDR--------SSNTSPDMPNKKP 554
Query: 444 R 444
R
Sbjct: 555 R 555
>gi|449496519|ref|XP_002196793.2| PREDICTED: poly(A) polymerase gamma [Taeniopygia guttata]
Length = 746
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 199/450 (44%), Positives = 279/450 (62%), Gaps = 22/450 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH G+DID LCV P H R DFF + L EV L + DA+VP
Sbjct: 96 IFTFGSYRLGVHTKGSDIDALCVAPSHVERS-DFFQSFFEKLKNQEEVKNLRAIEDAYVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++A+LSL + +DLD+ DS L++ D + +RSLNG RVTD+ILRLVP
Sbjct: 155 VIKFEFDGIEIDLVFAKLSLPTVSDDLDLRDDSCLKSLDIRCIRSLNGSRVTDEILRLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
++NFR TLR ++ WAKRRGVYSN+ GFLGG++WA+LVARICQLYPNA+ S L+++FF +
Sbjct: 215 NLENFRLTLRAVKLWAKRRGVYSNIMGFLGGVSWAMLVARICQLYPNALASTLINKFFLI 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WP PVLL +EE L L VWDPR NP D+YH+MPIITPAYP NS+YNVS ST
Sbjct: 275 FSKWDWPKPVLLKRLEESFLNLPVWDPRVNPSDRYHVMPIITPAYPQQNSTYNVSVSTRA 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EFQRG E+ + + K ++ DW LFEP FF+ YK+Y+ + SA + NW G
Sbjct: 335 VMVEEFQRGLEVTDEILKGKS--DWSKLFEPLNFFQKYKHYIVLTASAFTEEHHLNWIGL 392
Query: 309 VESRLRQLTLKIERH---TYNMLQCHPHPGDFSDKSKPLYCS-YFMGLQRKQG------- 357
V+S++R L +ER+ T +Q PG+ + Y S +F+GL K+
Sbjct: 393 VKSKIRVLVGNLERNEFITIAHVQPQSFPGNEVLYKQNAYVSMWFLGLVFKKAESAVKTN 452
Query: 358 VPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 417
V + G Q T ++QA ++ L K GM+I +V R+ L ++ P G R +
Sbjct: 453 VDLTHGIQ---SFTDTVYRQASALNIL-KEGMKIEATYVKRKQL-HYFLPAGTLQKRKKQ 507
Query: 418 GTWD---SRRALERKVSSHTKPGADDGRKR 444
D + L+ K SS + +D + R
Sbjct: 508 RVSDISQNNSGLQCKRSSLGESCSDGSKDR 537
>gi|328853642|gb|EGG02779.1| hypothetical protein MELLADRAFT_38417 [Melampsora larici-populina
98AG31]
Length = 529
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 197/437 (45%), Positives = 261/437 (59%), Gaps = 47/437 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCV PR TRE FF L QML E PEVTEL VP+A VP
Sbjct: 80 IFTFGSYRLGVHGPGSDIDTLCVVPRQVTREH-FFEILPQMLKERPEVTELSTVPEAFVP 138
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ KFSG+ +DLL+ARL+L +P+DL++ D++L+N D++ VRSL G RVTD+ILRLVP
Sbjct: 139 IISLKFSGIEVDLLFARLALPSVPDDLELKDDALLKNLDDRCVRSLGGSRVTDEILRLVP 198
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
++ FR +LR ++ WAK R VYSNV GF GG+ WA+ AR+CQLYPN + +V+RFF V
Sbjct: 199 DVEVFRHSLRAIKLWAKNRAVYSNVMGFCGGVAWAMCTARVCQLYPNKPAATIVNRFFAV 258
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
+QW WP+PVLL AI G +G Q VW+P+ P+D+ H MPIITPAYPCM S++NV+ ST
Sbjct: 259 LSQWNWPSPVLLKAIGSGPIGDQRRVWNPKIYPQDRGHRMPIITPAYPCMCSTHNVTKST 318
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
++MM EF+RG + +A+ A W LFE FF Y+NY++I S+ AD W
Sbjct: 319 AQVMMTEFKRGLAVTDAIATGSA--QWSALFEKHDFFTRYRNYIQITASSPEADAHLKWA 376
Query: 307 GWVESRLRQLTLKIER-HTYNMLQCHPHPGDFSDKSKPL--------------------- 344
G VESRLR L LK+E T +M HP FS+ + L
Sbjct: 377 GTVESRLRLLVLKVEEIETVDM--AHPFIKGFSNTTYALNRQEVSLVQGGDMPNEIASRI 434
Query: 345 --------------YCSYFMGLQRKQGVPVGE--GEQFDIRLTVKEFKQAVSMYT-LRKP 387
CS+F+GL PVG + DI V EF + V + +
Sbjct: 435 PEDYENRADVEVVHTCSFFVGLLVHPK-PVGHVGPRKLDITYPVGEFTRMVKQWEGYSED 493
Query: 388 GMQISVAHVTRRNLPNF 404
M ISV H+ + P+F
Sbjct: 494 KMSISVRHIKKSVYPSF 510
>gi|147905450|ref|NP_001089116.1| poly(A) polymerase gamma [Xenopus laevis]
gi|73671771|gb|AAZ80291.1| SRP 3'-adenylating protein [Xenopus laevis]
Length = 751
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 204/489 (41%), Positives = 283/489 (57%), Gaps = 22/489 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID+LCV PRH R DFF + L + + L V DA VP
Sbjct: 95 IFTFGSYRLGVHTKGADIDSLCVAPRHVERS-DFFQTFSEKLKQQDGIKNLRAVEDAFVP 153
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F IDL++ARL L IP++LD+ DS L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 154 VIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDSRLRNLDIRCIRSLNGCRVTDEILHLVP 213
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 214 NKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 273
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL E+ +L L VWDPR NP D+ HLMPIITPAYP NS+YNVS ST
Sbjct: 274 FSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPIITPAYPQQNSTYNVSISTRS 333
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + DW LFEP FF YK+Y+ + SA + W G
Sbjct: 334 VMVEEFKQGLLVTDEILLGRC--DWSKLFEPPNFFHKYKHYIVLTASASTEEHHLEWVGL 391
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSD-----KSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ K+ V
Sbjct: 392 VESKIRVLVGNLERNNFITL-AHVNPQSFPGNRDHCKDNEYVSMWFLGIIFKK---VENA 447
Query: 364 EQFDIRLT--VKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 416
E +I LT ++ F +QA ++ L+K GM+I HV R+ L +++ P V R
Sbjct: 448 ESVNIDLTHDIQSFTDTVYRQANNINMLKK-GMKIEATHVKRKQLHHYL-PAEVVQKRKK 505
Query: 417 KGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSP 476
+ D R+ +S T + + TD CH + S S F +
Sbjct: 506 QSVPDINRSACALLSKRTSLDGNFLDSSRDTDTGTPCD-SPTSCHKSSRSDSPSFPDAHR 564
Query: 477 IMSTISSSS 485
++ +SS+
Sbjct: 565 SLTEGTSST 573
>gi|336374059|gb|EGO02397.1| hypothetical protein SERLA73DRAFT_120990 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386978|gb|EGO28124.1| hypothetical protein SERLADRAFT_367679 [Serpula lacrymans var.
lacrymans S7.9]
Length = 558
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 194/476 (40%), Positives = 272/476 (57%), Gaps = 49/476 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCV P+H +RE DFF ML E +E+ VP+A+VP
Sbjct: 85 IFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DFFEVFEPMLKEADGASEVSGVPEAYVP 143
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K K G+ DLL ARL+L IP+DL + D++L+N DE+ +RSL G RV D+ILRLVP
Sbjct: 144 IIKAKLMGIPFDLLMARLALSSIPDDLSLKDDNLLRNLDERCIRSLGGSRVVDEILRLVP 203
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR +LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQLYPNA+ +VSRFF +
Sbjct: 204 NVHVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNAIAGAIVSRFFII 263
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QW WP PVLL IEEG L ++VW+P+ P D+ H MPIITPAYP M S++NV+ ST
Sbjct: 264 MYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPADRSHRMPIITPAYPAMCSTHNVTASTQM 323
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +EF++G +I + + A +W LF FF Y+ YL++ S +AD W G
Sbjct: 324 IMTEEFKKGADIVDKVIVGTA--EWSELFAKHDFFHKYRYYLQVIASTGSADLQIKWSGT 381
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC---------------------- 346
VESR+RQL +K+E + +++ HP F + YC
Sbjct: 382 VESRIRQLVMKLE-YVDSLILAHPFIKGFEQIA---YCTSDEEVRAVAQGETSDAITRRK 437
Query: 347 ----------------SYFMGLQRKQGVPVGEG-EQFDIRLTVKEFKQAVSMY-TLRKPG 388
++++GL + P G + DI EF + V M+ +P
Sbjct: 438 KEDIAGVEGATEVHTTTFYIGLAIEPKQPGAAGPRRLDISYPTTEFTKLVKMWEKYDEPT 497
Query: 389 MQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKR 444
M I V H+ LP++VF G R +P + + A S+HT P + ++R
Sbjct: 498 MGIVVRHIKSAALPDYVFDEGER--QPRQALKRPKTAKGSGKSNHTSPDVPNKKRR 551
>gi|26330928|dbj|BAC29194.1| unnamed protein product [Mus musculus]
Length = 739
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 255/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPTNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K+ +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKANNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL 496
>gi|157822073|ref|NP_001100714.1| poly(A) polymerase gamma [Rattus norvegicus]
gi|149044811|gb|EDL97997.1| poly(A) polymerase gamma (predicted) [Rattus norvegicus]
Length = 739
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 181/406 (44%), Positives = 255/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L V L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGVRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K+ +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKANNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL 496
>gi|147900391|ref|NP_001091535.1| poly(A) polymerase gamma [Bos taurus]
gi|146186839|gb|AAI40626.1| PAPOLG protein [Bos taurus]
gi|296482594|tpg|DAA24709.1| TPA: poly(A) polymerase gamma [Bos taurus]
Length = 740
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 181/406 (44%), Positives = 254/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I E+LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|426223633|ref|XP_004005979.1| PREDICTED: poly(A) polymerase gamma [Ovis aries]
Length = 740
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 181/406 (44%), Positives = 254/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I E+LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|440911569|gb|ELR61221.1| Poly(A) polymerase gamma, partial [Bos grunniens mutus]
Length = 737
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 181/406 (44%), Positives = 254/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 93 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 151
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I E+LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 152 VIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 211
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 212 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 271
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 272 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 331
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 332 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 389
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 390 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 447
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 448 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 493
>gi|13641252|gb|AAK31791.1| SRP RNA 3' adenylating enzyme/pap2 [Homo sapiens]
Length = 736
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 254/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQSEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|297667577|ref|XP_002812053.1| PREDICTED: poly(A) polymerase gamma [Pongo abelii]
Length = 736
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 254/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|16306568|ref|NP_075045.2| poly(A) polymerase gamma [Homo sapiens]
gi|332813224|ref|XP_515496.3| PREDICTED: poly(A) polymerase gamma isoform 6 [Pan troglodytes]
gi|397521664|ref|XP_003830910.1| PREDICTED: poly(A) polymerase gamma [Pan paniscus]
gi|116242699|sp|Q9BWT3.2|PAPOG_HUMAN RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Neo-poly(A) polymerase; Short=Neo-PAP; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|15080911|gb|AAK83701.1|AF312211_1 neo-poly(A) polymerase [Homo sapiens]
gi|15384858|emb|CAC59751.1| poly(A) polymerase gamma [Homo sapiens]
gi|84202581|gb|AAI11702.1| Poly(A) polymerase gamma [Homo sapiens]
gi|88682947|gb|AAI13748.1| Poly(A) polymerase gamma [Homo sapiens]
gi|119620439|gb|EAX00034.1| poly(A) polymerase gamma, isoform CRA_f [Homo sapiens]
gi|189054448|dbj|BAG37221.1| unnamed protein product [Homo sapiens]
gi|410216568|gb|JAA05503.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410265336|gb|JAA20634.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410295358|gb|JAA26279.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410346708|gb|JAA40709.1| poly(A) polymerase gamma [Pan troglodytes]
Length = 736
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 254/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|426335656|ref|XP_004029330.1| PREDICTED: poly(A) polymerase gamma [Gorilla gorilla gorilla]
Length = 736
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 254/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|226494207|ref|NP_766143.2| poly(A) polymerase gamma [Mus musculus]
gi|81885554|sp|Q6PCL9.1|PAPOG_MOUSE RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|37589275|gb|AAH59271.1| Poly(A) polymerase gamma [Mus musculus]
gi|73671773|gb|AAZ80292.1| SRP 3'-adenylating protein [Mus musculus]
gi|148675952|gb|EDL07899.1| poly(A) polymerase gamma, isoform CRA_b [Mus musculus]
Length = 739
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 255/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K+ +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKANNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL 496
>gi|119620435|gb|EAX00030.1| poly(A) polymerase gamma, isoform CRA_b [Homo sapiens]
Length = 743
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 254/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|54020874|ref|NP_001005684.1| poly(A) polymerase gamma [Xenopus (Silurana) tropicalis]
gi|49522894|gb|AAH75107.1| poly(A) polymerase beta (testis specific) [Xenopus (Silurana)
tropicalis]
Length = 752
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 188/409 (45%), Positives = 257/409 (62%), Gaps = 20/409 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID+LCV PRH R DFF + L + + L V DA VP
Sbjct: 95 IFTFGSYRLGVHTKGADIDSLCVAPRHVERS-DFFQSFSEKLKQQDGIKNLRAVEDAFVP 153
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F IDL++ARL L IP++LD+ DS L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 154 VIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDSRLRNLDIRCIRSLNGCRVTDEILHLVP 213
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 214 NKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 273
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL E+ +L L VWDPR NP D+ HLMPIITPAYP NS+YNVS ST
Sbjct: 274 FSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPIITPAYPQQNSTYNVSISTRS 333
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + DW LFEP FF YK+Y+ + SA + W G
Sbjct: 334 VMVEEFKQGLSVTDEILLGRC--DWSKLFEPPNFFHKYKHYIVLTASASTEEHHLEWVGL 391
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSD-----KSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+++ L H +P F K +F+G+ K+ V
Sbjct: 392 VESKIRVLVGNLERNSFITL-AHVNPQSFPGNRDHCKDNEYVSMWFLGIIFKK---VENA 447
Query: 364 EQFDIRLT--VKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPNFV 405
E +I LT ++ F +QA ++ L+K GM+I HV R+ L +++
Sbjct: 448 ESVNIDLTHDIQSFTDTVYRQANNINMLKK-GMRIEATHVKRKQLHHYL 495
>gi|348563534|ref|XP_003467562.1| PREDICTED: poly(A) polymerase gamma [Cavia porcellus]
Length = 741
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 254/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|427797219|gb|JAA64061.1| Putative polya polymerase, partial [Rhipicephalus pulchellus]
Length = 759
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 185/398 (46%), Positives = 249/398 (62%), Gaps = 9/398 (2%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADIDTLCV PRH R DFF ++L + EV +L V +A VPV+K
Sbjct: 171 FGSYRLGVHTKGADIDTLCVAPRHIERS-DFFASFVELLRQQEEVKDLRAVEEAFVPVIK 229
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ +D+L+ARL+L IPED D+ +IL+N D++ VRSLNGCRVTD+IL LVP +
Sbjct: 230 MTFDGIELDMLFARLALKDIPEDQDLRDVNILKNLDQKCVRSLNGCRVTDEILHLVPNRE 289
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
FR LR ++ WAKR GVYSNV G+LGG++WA+LVAR CQLYPNA + LV +FF V++Q
Sbjct: 290 TFRLALRAIKLWAKRHGVYSNVLGYLGGVSWAMLVARTCQLYPNAAAATLVHKFFLVFSQ 349
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W WP PVLL EE LG VWDPR N D++HLMPIITPAYP NS++NVS STL IM
Sbjct: 350 WPWPKPVLLKQPEESRLGFPVWDPRVNVADRFHLMPIITPAYPQQNSTFNVSVSTLTIMR 409
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
EF++G I + + + DW LFEP FF YK+++ + S ++ + W G VES
Sbjct: 410 QEFKQGLAITDEIMLRRS--DWMKLFEPPNFFGKYKHFIVLMASTQSKEHHLEWYGLVES 467
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP----LYCSYFMGLQRKQGVPVGEGEQFD 367
++R L +ERH Y + H +P F S+P L +F+GLQ + V +D
Sbjct: 468 KIRILISNLERHPYIAI-AHVNPESFP-PSEPEGDKLQSMWFIGLQFNKTEHVNIDLTYD 525
Query: 368 IRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 405
R V K+ + + K M++ + +V RR L ++
Sbjct: 526 TRSFVDTVKRQATAINIFKQDMEVDIKYVRRRELVRYL 563
>gi|403260636|ref|XP_003922768.1| PREDICTED: poly(A) polymerase gamma [Saimiri boliviensis
boliviensis]
Length = 736
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 254/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGSKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|311252569|ref|XP_003125156.1| PREDICTED: poly(A) polymerase gamma-like [Sus scrofa]
Length = 741
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 254/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|395829706|ref|XP_003787987.1| PREDICTED: poly(A) polymerase gamma [Otolemur garnettii]
Length = 741
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 253/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA + W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEEHQLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|213625101|gb|AAI69821.1| LOC733387 protein [Xenopus laevis]
Length = 750
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 193/429 (44%), Positives = 263/429 (61%), Gaps = 21/429 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID+LCV PRH R DFF + L + + L V DA VP
Sbjct: 94 IFTFGSYRLGVHTKGADIDSLCVAPRHVERS-DFFQTFSEKLKQQDGIKNLRAVEDAFVP 152
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F IDL++ARL L IP++LD+ DS L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 153 VIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDSRLRNLDIRCIRSLNGCRVTDEILHLVP 212
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 213 NKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 272
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL E+ +L L VWDPR NP D+ HLMPIITPAYP NS+YNVS ST
Sbjct: 273 FSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPIITPAYPQQNSTYNVSISTRS 332
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + DW LFEP FF YK+Y+ + SA + W G
Sbjct: 333 VMVEEFKQGLLVTDEILLGRC--DWSKLFEPPNFFHKYKHYIVLTASASTEEHHLEWVGL 390
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSD-----KSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ K+ V
Sbjct: 391 VESKIRVLVGNLERNNFITL-AHVNPQSFPGNRDHCKDNEYVSMWFLGIIFKK---VENA 446
Query: 364 EQFDIRLT--VKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 416
E +I LT ++ F +QA ++ L+K GM+I HV R+ L +++ P V R
Sbjct: 447 ESVNIDLTHDIQSFTDTVYRQANNINMLKK-GMKIEATHVKRKQLHHYL-PAEVVQKRKK 504
Query: 417 KGTWDSRRA 425
+ D R+
Sbjct: 505 QSVPDINRS 513
>gi|344291804|ref|XP_003417620.1| PREDICTED: poly(A) polymerase gamma-like [Loxodonta africana]
Length = 741
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 254/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQSISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPADRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|119620434|gb|EAX00029.1| poly(A) polymerase gamma, isoform CRA_a [Homo sapiens]
Length = 508
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 182/412 (44%), Positives = 257/412 (62%), Gaps = 15/412 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 411
D+ ++ F V + + K GM+I HV ++ L +++ P +R
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-PAEIR 501
>gi|10435509|dbj|BAB14604.1| unnamed protein product [Homo sapiens]
Length = 675
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 183/426 (42%), Positives = 261/426 (61%), Gaps = 15/426 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 93 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 151
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 152 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 211
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 212 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 271
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 272 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 331
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 332 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 389
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 390 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 447
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 419
D+ ++ F V + + K GM+I HV ++ L +++ P + + +
Sbjct: 448 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-PAEILQKKKKQSL 506
Query: 420 WDSRRA 425
D R+
Sbjct: 507 SDVNRS 512
>gi|410954895|ref|XP_003984095.1| PREDICTED: poly(A) polymerase gamma [Felis catus]
Length = 762
Score = 361 bits (927), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 254/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 117 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 175
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 176 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 235
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 236 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 295
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 296 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 355
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 356 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 413
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 414 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 471
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 472 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 517
>gi|194220708|ref|XP_001917579.1| PREDICTED: poly(A) polymerase gamma-like [Equus caballus]
Length = 741
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 254/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|431912670|gb|ELK14688.1| Poly(A) polymerase gamma [Pteropus alecto]
Length = 741
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 253/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTGEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|380815688|gb|AFE79718.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 254/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|301783573|ref|XP_002927202.1| PREDICTED: poly(A) polymerase gamma-like [Ailuropoda melanoleuca]
Length = 739
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 254/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|148675951|gb|EDL07898.1| poly(A) polymerase gamma, isoform CRA_a [Mus musculus]
Length = 650
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 255/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 153 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 211
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 212 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 271
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 272 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 331
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 332 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 391
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 392 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 449
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K+ +F+G+ ++ V E
Sbjct: 450 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKANNYVSMWFLGIIFRR-VENAES 507
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 508 VNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL 553
>gi|383413715|gb|AFH30071.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 361 bits (926), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 254/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|55727879|emb|CAH90692.1| hypothetical protein [Pongo abelii]
gi|83405193|gb|AAI10907.1| PAPOLG protein [Homo sapiens]
Length = 506
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 254/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|281354338|gb|EFB29922.1| hypothetical protein PANDA_016961 [Ailuropoda melanoleuca]
Length = 736
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 254/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 93 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 151
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 152 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 211
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 212 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 271
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 272 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 331
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 332 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 389
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 390 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 447
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 448 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 493
>gi|355565713|gb|EHH22142.1| hypothetical protein EGK_05354, partial [Macaca mulatta]
gi|355751336|gb|EHH55591.1| hypothetical protein EGM_04830, partial [Macaca fascicularis]
Length = 733
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 254/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 93 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 151
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 152 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 211
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 212 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 271
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 272 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 331
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 332 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 389
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 390 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 447
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 448 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 493
>gi|340376009|ref|XP_003386526.1| PREDICTED: poly(A) polymerase gamma-like [Amphimedon queenslandica]
Length = 689
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 190/414 (45%), Positives = 264/414 (63%), Gaps = 16/414 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHG GADIDTL V PRH R DFF ++L E VT + VPDA VP
Sbjct: 87 IFTFGSYRLGVHGKGADIDTLLVAPRHIERT-DFFSSFKELLFEAKNVTNVRAVPDAFVP 145
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K +F GV +DLL+ARL+L VIP+ L + S+L+N D + VRSLNGCRVTD IL+LVP
Sbjct: 146 VIKLEFDGVEMDLLFARLALPVIPDGLGLLDMSLLKNLDAKCVRSLNGCRVTDSILKLVP 205
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR LR ++ WAKRRG+YSN G+LGG++WA+LVAR CQLYPNA S +V +FF V
Sbjct: 206 NQETFRLALRAIKLWAKRRGIYSNALGYLGGVSWAMLVARTCQLYPNAASSTIVLKFFFV 265
Query: 189 YTQWRWPNPVLLCAIEEGSLG--LQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
+ +W WP PVLL EE LG LQVW+P+ NP D +HLMPIITPAYP NS++NV+ ST
Sbjct: 266 FEKWNWPQPVLLRKAEEDVLGLNLQVWNPQVNPGDAHHLMPIITPAYPQQNSTFNVTKST 325
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
+M++EF+RG +IC ++ + + WD LFEP FF YK+Y+ I +A ++D L W
Sbjct: 326 RDVMLNEFRRGLDICRDIDVGK--LSWDILFEPIKFFSLYKHYIVICATAIDSDLLLKWS 383
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFS---DKSKPLYCSYFMGLQRKQGVPVGEG 363
G VES++R L K+E + N+ H +P + S + +F+GL+ G P G
Sbjct: 384 GLVESKIRILIGKLEDNE-NIKIAHVNPTSYPRIVPDSTDSHLMWFIGLEFCVG-PGGVN 441
Query: 364 --EQFDIRLTVKEFKQAVSMYT---LRKPGMQISVAHVTRRNLPNFVFPGGVRP 412
++I++ + ++ ++ + LR G Q+ V H RR+L +++ P V P
Sbjct: 442 ITLTYEIQMFINSVVKSPALQSSPDLRN-GTQLDVKHARRRDLSDYLSPDIVPP 494
>gi|195124015|ref|XP_002006489.1| GI18544 [Drosophila mojavensis]
gi|193911557|gb|EDW10424.1| GI18544 [Drosophila mojavensis]
Length = 664
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 188/438 (42%), Positives = 264/438 (60%), Gaps = 41/438 (9%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PR+ R D+F ++L + PEVTE V +A VPV+K
Sbjct: 108 FGSYRLGVHHKGADIDALCVAPRNIERS-DYFQSFFEILKKQPEVTECRSVEEAFVPVIK 166
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F GV IDLL+ARLSL IP+D D+ D++L+N D ++VRSLNGCRVTD+IL LVP I+
Sbjct: 167 MNFDGVEIDLLFARLSLKEIPDDFDLRDDNLLKNLDPRSVRSLNGCRVTDEILALVPNIE 226
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAKR G+YSN G+ GG+ WA+LVAR CQLYPNA + LV +FF V+++
Sbjct: 227 NFRLALRAIKLWAKRHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSR 286
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WPNPVLL ++ +L QVWDPR N D+YHLMPIITPAYP NS++NVS ST ++++
Sbjct: 287 WKWPNPVLLKHLDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVIL 346
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
EF RG I + E V WD LFE +FF Y++++ + ++++ ADD W G VES
Sbjct: 347 TEFNRGMSITD--EIMLGRVGWDRLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVES 404
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSDK----------------------------SKP 343
++R L +ER + +L H +P F K +
Sbjct: 405 KVRLLIGNLERIPHIVL-AHVNPKCFELKKGAATANNSQNNSGNEDDLKQQSAQAAVTTA 463
Query: 344 LYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY----TLRKPGMQISVAHVTR 398
YCS +F+GL+ ++ E D+ +++ F + V+M+ + K GM I HV R
Sbjct: 464 PYCSLWFIGLEFER----SENLNIDLTESIQNFTEHVNMHGVNIKMLKEGMSIVARHVKR 519
Query: 399 RNLPNFVFPGGVRPSRPS 416
+ L ++ ++ R S
Sbjct: 520 KQLSVYLDADFLKRERKS 537
>gi|321469973|gb|EFX80951.1| hypothetical protein DAPPUDRAFT_318160 [Daphnia pulex]
Length = 630
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 179/398 (44%), Positives = 251/398 (63%), Gaps = 9/398 (2%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PRH R D+F +L + PEVTEL V +A VPV+K
Sbjct: 105 FGSYRLGVHNKGADIDALCVAPRHVDRV-DYFTSFVDLLKKQPEVTELRAVEEAFVPVIK 163
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ +D+L+ARL+L IP+++D+ D +L+N D + VRSLNGCRVTD+ILRLVP I
Sbjct: 164 MNFDGIELDMLFARLALKEIPDNMDLKDDMLLKNLDPKCVRSLNGCRVTDEILRLVPNID 223
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAK+ G+YSNV G+LGG++WA+LVAR CQLYPNA + LV +FF V+++
Sbjct: 224 NFRLALRAIKLWAKKHGIYSNVLGYLGGVSWAMLVARTCQLYPNAAAATLVQKFFLVFSK 283
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W WP PVLL + +L VWDPR N D+YHLMPIITPAYP NS++NVS ST +M
Sbjct: 284 WEWPQPVLLKPPDNVNLNYPVWDPRVNVSDRYHLMPIITPAYPQQNSTFNVSCSTRAVMQ 343
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
+EF++G + E + +A WD LFEP FF YK+++ + S+ + +D W G VES
Sbjct: 344 EEFRQGFNMTEEIMTGKA--SWDKLFEPPNFFVKYKHFIVLIASSSSVEDQLEWVGLVES 401
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP----LYCSYFMGLQRKQGVPVGEGEQFD 367
++R L L +ER+ + L H +P + D +P + +F+GL K+ + D
Sbjct: 402 KIRHLILALERNDHITL-AHINPEQY-DPVQPEPDTISTMWFIGLVFKKTESLNIDLTQD 459
Query: 368 IRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 405
I+ + + S K G +I HV R+ L +++
Sbjct: 460 IQAFTGQVHRQASTAKTVKDGRRIDAKHVKRKQLSSYL 497
>gi|10433147|dbj|BAB13919.1| unnamed protein product [Homo sapiens]
Length = 501
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 254/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|363731198|ref|XP_003640929.1| PREDICTED: poly(A) polymerase gamma-like [Gallus gallus]
Length = 716
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 180/414 (43%), Positives = 261/414 (63%), Gaps = 13/414 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L E+ L V DA+VP
Sbjct: 95 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQEEIKNLRAVEDAYVP 153
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL + + ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 154 VVKFEFDGIEIDLVFARLPVQTVSDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 213
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+NF+ TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQL+PNA+ S LV +FF +
Sbjct: 214 NKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLHPNALASTLVHKFFLI 273
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YH+MPIITPAYP NS+YNVSTST
Sbjct: 274 FSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPAYPQQNSTYNVSTSTRA 333
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
++++E + G + + + + DW LFE FF+ YK+Y+ + S + W G
Sbjct: 334 VVVEELKHGLAVTNEILQGRS--DWPKLFEQPNFFQKYKHYIVLTASTYTEEHHLEWVGL 391
Query: 309 VESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGE 364
VES++R L +ER+ + N+ +P PG+ + Y S +F+G+ ++ + E
Sbjct: 392 VESKIRVLVGNLERNEFINIAHVNPQSFPGNQEHCKQSRYVSMWFLGIIFRK-LESAEST 450
Query: 365 QFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 414
+ D+ ++ F AV + + K GM+I A+V R++L ++ P G R
Sbjct: 451 KIDLTYDIQSFTDAVYRQANNINMLKEGMKIETAYVKRKHL-HYFLPAGTLQKR 503
>gi|417404307|gb|JAA48913.1| Putative polya polymerase [Desmodus rotundus]
Length = 742
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 180/406 (44%), Positives = 253/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTGEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSD-----KSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHYKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|126303830|ref|XP_001375093.1| PREDICTED: poly(A) polymerase gamma [Monodelphis domestica]
Length = 748
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 177/405 (43%), Positives = 257/405 (63%), Gaps = 12/405 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L + DA+VP
Sbjct: 95 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAIEDAYVP 153
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ + ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 154 VVKFEFDGIEIDLVFARLAIQTVSDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 213
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 214 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 273
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 274 FSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 333
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 334 VMVEEFKQGLAVTNEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 391
Query: 309 VESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGE 364
VES++R L +ER+ + + +P PG+ + Y S +F+G+ ++ V E
Sbjct: 392 VESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHYKESDYVSMWFLGIIFRR-VENAESV 450
Query: 365 QFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 NIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 495
>gi|326914719|ref|XP_003203670.1| PREDICTED: poly(A) polymerase gamma-like [Meleagris gallopavo]
Length = 860
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 181/414 (43%), Positives = 263/414 (63%), Gaps = 13/414 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L E+ L V DA+VP
Sbjct: 233 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQEEIKNLRAVEDAYVP 291
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDLL+ARL + + ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 292 VVKFEFDGIEIDLLFARLPVQTVSDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 351
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+NF+ TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQL+PNA+ S LV++FF +
Sbjct: 352 NKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLHPNALASTLVNKFFLI 411
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YH+MPIITPAYP NS+YNVSTST
Sbjct: 412 FSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPAYPQQNSTYNVSTSTRA 471
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
++++E + G + + + ++ DW LFE FF+ YK+Y+ + S + W G
Sbjct: 472 VVVEELKHGLAVTNEILQGKS--DWPKLFEQPNFFQKYKHYIVLTASTYTEEHHLEWVGL 529
Query: 309 VESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGE 364
VES++R L +ER+ + N+ +P PG+ + Y S +F+G+ ++ + E
Sbjct: 530 VESKIRVLVGNLERNEFINIAHVNPQSFPGNQEHCKQSRYVSMWFLGIIFRK-LENTEST 588
Query: 365 QFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 414
+ D+ ++ F AV + + K GM+I A+V R++L ++ P G R
Sbjct: 589 KIDLTYDIQSFTDAVYRQANNINMLKEGMKIETAYVKRKHL-HYFLPAGTLQKR 641
>gi|299748265|ref|XP_001837569.2| polymerase [Coprinopsis cinerea okayama7#130]
gi|298407893|gb|EAU84193.2| polymerase [Coprinopsis cinerea okayama7#130]
Length = 595
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 200/517 (38%), Positives = 287/517 (55%), Gaps = 60/517 (11%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCV P+H TRE DFF ML EM VTE+ VP+A+VP
Sbjct: 89 IFTFGSYRLGVHGPGSDIDTLCVVPKHVTRE-DFFDTFEPMLKEMEGVTEVSGVPEAYVP 147
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K + G+ +D L ARL+L IP+DL + D++L+N DE+ VRSL G R ++ILRLVP
Sbjct: 148 IIKTEIDGIPLDFLMARLNLASIPDDLSLQDDNLLRNLDERCVRSLGGSRQVNEILRLVP 207
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR LRC++ WA+RR +YSNV GFLGG+ WALLVARICQLYPNA+ +VSRFF +
Sbjct: 208 NVDVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWALLVARICQLYPNALAGAIVSRFFII 267
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QW WP PVLL IE+G L ++VW+P+ P D+ H MPIITPAYP M S++NV+ ST
Sbjct: 268 MYQWSWPQPVLLKQIEDGPLQVRVWNPKLYPADRAHRMPIITPAYPSMCSTHNVTASTQM 327
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +EF+RG +I + + A W LF FF Y+ YL+I S + D W G
Sbjct: 328 IMTEEFKRGADIVDRVIVGTA--QWSELFAKHDFFHKYRYYLQIIASTGDPDLQNKWSGT 385
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF------------------------------- 337
VESR+RQL +K+E + +++ HP F
Sbjct: 386 VESRIRQLVMKLE-YVESLILAHPFIKGFDQVSYCLNEDEVKAVVQGEISEAIASRKKED 444
Query: 338 ---SDKSKPLYCSYF---MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY-TLRKPGMQ 390
+ S+ +Y + F + +Q K VG + DI ++F + V M+ + M
Sbjct: 445 IEGKEGSQTVYTTTFYIGLAIQPKPAGAVGP-RRLDISYPTQDFSKLVKMWDKYDESKMG 503
Query: 391 ISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDN 450
I V H+ LP+ VF G RP++ ++ +R + ++ KR+++ +
Sbjct: 504 IIVRHIKSSALPDNVFDPGERPAKVTQ---------KRVKGKSSNISSEQPNKRQRSSTS 554
Query: 451 VDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSIN 487
V +R P+ +G +P++ T+ S N
Sbjct: 555 VADTIR--------PTENGTSTGTTPVVETLVRPSFN 583
>gi|73969700|ref|XP_852387.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Canis lupus
familiaris]
Length = 738
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 179/406 (44%), Positives = 254/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVT++IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTNEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|395508015|ref|XP_003758311.1| PREDICTED: poly(A) polymerase gamma [Sarcophilus harrisii]
Length = 763
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 184/435 (42%), Positives = 268/435 (61%), Gaps = 16/435 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L + DA+VP
Sbjct: 110 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAIEDAYVP 168
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ + ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 169 VVKFEFDGIEIDLVFARLAIQTVSDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 228
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 229 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 288
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 289 FSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 348
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 349 VMVEEFKQGLAVTGEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 406
Query: 309 VESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGE 364
VES++R L +ER+ + + +P PG+ + Y S +F+G+ ++ V E
Sbjct: 407 VESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHYKESDYVSMWFLGIIFRR-VENAESV 465
Query: 365 QFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTW 420
D+ ++ F V + + K GM+I HV ++ L ++ P + + +
Sbjct: 466 NIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHY-LPAEILQKKKKQSLQ 524
Query: 421 DSRRA---LERKVSS 432
D R+ L+ K SS
Sbjct: 525 DINRSASGLQSKRSS 539
>gi|109102989|ref|XP_001115228.1| PREDICTED: poly(A) polymerase gamma-like [Macaca mulatta]
Length = 736
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 179/406 (44%), Positives = 253/406 (62%), Gaps = 14/406 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + ++ +W L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTNEILQGKS--NWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|389744511|gb|EIM85694.1| poly-A polymerase [Stereum hirsutum FP-91666 SS1]
Length = 628
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 200/489 (40%), Positives = 269/489 (55%), Gaps = 51/489 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCV P+H RE DFF QML E VTE VP+A+VP
Sbjct: 85 IFTFGSYRLGVHGPGSDIDTLCVVPKHVLRE-DFFDVFEQMLRETEGVTECSGVPEAYVP 143
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K K SG+ ID L ARL+L IP+DL + D++L+N D++ +RSL G RVTD+ILRLVP
Sbjct: 144 IVKVKISGIPIDFLMARLALSTIPDDLSLQDDNLLRNLDDRCIRSLGGSRVTDEILRLVP 203
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR +LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQLYPNA+ +VSRFF +
Sbjct: 204 NVNVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNAIAGAIVSRFFII 263
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QW WP PVLL IEEG L ++VW+P+ P D+ H MPIITPAYP M +++NV+ ST
Sbjct: 264 MYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPGDRSHRMPIITPAYPAMCATHNVTASTQM 323
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +EF++G +I + + A W LF FF Y+ YL+I S + W G
Sbjct: 324 IMTEEFKKGADIVDKVIVGTA--TWSELFAKHDFFHKYRYYLQIIASTGDPALQIKWAGT 381
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC---------------------- 346
VESRLRQL +K+E ++ HP F S YC
Sbjct: 382 VESRLRQLVMKLE-FVESLQLAHPFIKGFEQIS---YCLSEEEMRAVAQGEVSEAVAQRK 437
Query: 347 ----------------SYFMGL--QRKQGVPVGEGEQFDIRLTVKEFKQAVSMY-TLRKP 387
++++GL + +Q VG + DI EF + V + +
Sbjct: 438 KEDIEGKEGASQVYTSTFYIGLAIEARQAGSVGP-RKLDISWPTTEFTKMVKSWDKFDET 496
Query: 388 GMQISVAHVTRRNLPNFVFPGGVRPSRP--SKGTWDSRRALERKVSSHTKPGADDGRKRK 445
M I V H+ LP++VF G R +P +K S + R S P R
Sbjct: 497 KMGIIVRHIKSSTLPDYVFDAGERQPKPALTKKRPKSVKGTTRPNGSSDLPANKRPRASY 556
Query: 446 QTDDNVDTH 454
D+V T
Sbjct: 557 AGSDSVSTE 565
>gi|198433414|ref|XP_002124981.1| PREDICTED: similar to Poly(A) polymerase gamma (PAP-gamma)
(Polynucleotide adenylyltransferase gamma) (SRP RNA
3-adenylating enzyme) (Neo-poly(A) polymerase) (Neo-PAP)
[Ciona intestinalis]
Length = 833
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 181/404 (44%), Positives = 249/404 (61%), Gaps = 10/404 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + V GADIDTLCV PRH R DFF +L E EV+EL + DA VP
Sbjct: 85 LYTFGSYRLGVCAKGADIDTLCVVPRHVNRS-DFFSVFCTLLKERSEVSELRAIEDAFVP 143
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K KF GV ID+L++RL+L V+P D D+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 144 VIKLKFEGVEIDILFSRLALQVVPPDQDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 203
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I+NFR TLR ++ WAKR+G+YSN+ G+LGG++WA+LVAR CQLYPNA+ S LV RFF V
Sbjct: 204 NIENFRLTLRVIKLWAKRKGIYSNMLGYLGGVSWAMLVARTCQLYPNAIASTLVQRFFWV 263
Query: 189 YTQWRWPNPVLLCAIEEG-SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
++QW WP PVLL EE +L L VWDPR NP D+ HLMPIITPAYP NS+YNV+ S+L
Sbjct: 264 FSQWEWPRPVLLKQPEESNTLNLPVWDPRYNPSDRLHLMPIITPAYPQQNSTYNVTRSSL 323
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
+M EF G+ + + +N++ W L E FF YK+++ + SAE+ ++ W G
Sbjct: 324 TVMKGEFIDGYRVTAEIHENKS--SWLKLLETPNFFNEYKHFIVLMASAESQENFNLWTG 381
Query: 308 WVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQ-RKQGVPVG 361
VES++R L +ER+ Y ++ +P D + +F+GL+ K +
Sbjct: 382 LVESKIRILVGYLERNDYILIAHINQTGYPQEVKEKDVTTAYVNRWFLGLRFVKDLISTN 441
Query: 362 EGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 405
DI+ + + K GM++ + R LP ++
Sbjct: 442 INLTHDIQAFTDTLHRQAHNSKVFKEGMKVEATYSRRSQLPKYL 485
>gi|195151552|ref|XP_002016711.1| GL11728 [Drosophila persimilis]
gi|194110558|gb|EDW32601.1| GL11728 [Drosophila persimilis]
Length = 904
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 184/437 (42%), Positives = 260/437 (59%), Gaps = 39/437 (8%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PR+ R D+F ++L + PEVTE V +A VPV+K
Sbjct: 121 FGSYRLGVHHKGADIDALCVAPRNIERA-DYFQSFFEVLKKQPEVTECRSVEEAFVPVIK 179
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ IDLL+ARLSL IP+D D+ D++L+N D ++VRSLNGCRVTD+IL LVP I+
Sbjct: 180 MNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIE 239
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR CQLYPNA + LV +FF V+++
Sbjct: 240 NFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNATAATLVHKFFLVFSR 299
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WPNPVLL + +L QVWDPR N D+YHLMPIITPAYP NS++NVS ST ++M+
Sbjct: 300 WKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVML 359
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
EF RG I + + A W+ LFE +FF Y++++ + ++++ ADD W G VES
Sbjct: 360 TEFTRGMNITDEIMLGRA--SWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVES 417
Query: 312 RLRQLTLKIERHTYNML-----QC-----------------------HPHPGDFSDKSKP 343
++R L +ER+ + L +C P P S S P
Sbjct: 418 KIRLLIGNLERNPHIALAHVNPKCFELKKGESANNSQNNSGNEDDLKQPPPNQASVTSAP 477
Query: 344 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY----TLRKPGMQISVAHVTRR 399
+F+GL+ ++ E D+ +++ F + V M+ + K GM I HV R+
Sbjct: 478 FCSMWFIGLEFER----SENLNVDLTESIQNFTEHVIMHGVNIKMLKEGMAIDARHVKRK 533
Query: 400 NLPNFVFPGGVRPSRPS 416
L ++ ++ R S
Sbjct: 534 QLTVYLDADFLKRERKS 550
>gi|198459613|ref|XP_001361433.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
gi|198136742|gb|EAL26011.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
Length = 902
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 184/437 (42%), Positives = 260/437 (59%), Gaps = 39/437 (8%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PR+ R D+F ++L + PEVTE V +A VPV+K
Sbjct: 120 FGSYRLGVHHKGADIDALCVAPRNIERA-DYFQSFFEVLKKQPEVTECRSVEEAFVPVIK 178
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ IDLL+ARLSL IP+D D+ D++L+N D ++VRSLNGCRVTD+IL LVP I+
Sbjct: 179 MNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIE 238
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR CQLYPNA + LV +FF V+++
Sbjct: 239 NFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNATAATLVHKFFLVFSR 298
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WPNPVLL + +L QVWDPR N D+YHLMPIITPAYP NS++NVS ST ++M+
Sbjct: 299 WKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVML 358
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
EF RG I + + A W+ LFE +FF Y++++ + ++++ ADD W G VES
Sbjct: 359 TEFTRGMNITDEIMLGRA--SWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVES 416
Query: 312 RLRQLTLKIERHTYNML-----QC-----------------------HPHPGDFSDKSKP 343
++R L +ER+ + L +C P P S S P
Sbjct: 417 KIRLLIGNLERNPHIALAHVNPKCFELKKGESANNSQNNSGNEDDLKQPPPNQASVTSAP 476
Query: 344 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY----TLRKPGMQISVAHVTRR 399
+F+GL+ ++ E D+ +++ F + V M+ + K GM I HV R+
Sbjct: 477 FCSMWFIGLEFER----SENLNVDLTESIQNFTEHVIMHGVNIKMLKEGMAIDARHVKRK 532
Query: 400 NLPNFVFPGGVRPSRPS 416
L ++ ++ R S
Sbjct: 533 QLTVYLDADFLKRERKS 549
>gi|170090568|ref|XP_001876506.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647999|gb|EDR12242.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 600
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 193/446 (43%), Positives = 264/446 (59%), Gaps = 45/446 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCV P+H +RE DFF ML ++ VTE+ VP+A+VP
Sbjct: 103 IFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DFFEVFEPMLKDLEGVTEVSGVPEAYVP 161
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL--NGCRVTDQILRL 126
++K K SG+ +D L ARL+L IP+DL + D++L+N DE+ VRSL G RV D+ILRL
Sbjct: 162 IVKTKISGIPLDFLMARLALSSIPDDLSLQDDNLLRNLDERCVRSLGATGSRVIDEILRL 221
Query: 127 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 186
VP +Q FR LRC++ WA+RR +YSNV GFLGG+ WALLVARICQLYPNA+ +VSRFF
Sbjct: 222 VPNVQVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWALLVARICQLYPNAIAGAIVSRFF 281
Query: 187 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
+ QW WP PVLL IE+G L ++VW+P+ P D+ H MPIITPAYP M S++NV+ ST
Sbjct: 282 IIMYQWSWPQPVLLKQIEDGPLQVRVWNPKLYPADRSHRMPIITPAYPAMCSTHNVTAST 341
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
IM +EF+RG +I + + A W LF FF Y+ YL++ S NAD W
Sbjct: 342 QIIMTEEFKRGADIVDKVIVGSA--TWSELFAKHDFFHKYRYYLQVIASTGNADLQIKWS 399
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHPH--------------------PGDFSDK------ 340
G VESR+RQL +K+E + +++ HP G+ SD
Sbjct: 400 GTVESRIRQLVMKLE-YVDSLILAHPFIRGFEQVSYCLSEDEVRAVAEGEISDSVAGRKK 458
Query: 341 --------SKPLY-CSYFMGLQRKQGVPVGEG--EQFDIRLTVKEFKQAVSMY-TLRKPG 388
+ P+Y ++++GL + P G + DI +F + V M+ +
Sbjct: 459 EDIEGKEGAGPVYSTTFYIGLAIEPK-PTGATGPRRLDISYPTTDFTKLVKMWEKYDEAT 517
Query: 389 MQISVAHVTRRNLPNFVFPGGVRPSR 414
M I V H+ LP+ VF G RP +
Sbjct: 518 MGIVVRHIKSSGLPDNVFEPGERPPK 543
>gi|409050023|gb|EKM59500.1| hypothetical protein PHACADRAFT_250043 [Phanerochaete carnosa
HHB-10118-sp]
Length = 556
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 199/477 (41%), Positives = 271/477 (56%), Gaps = 45/477 (9%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG DIDTLCV P+H +RE DFF L ML E VTE+ VP+A+VP
Sbjct: 87 IFTFGSYRLGVHGPGTDIDTLCVVPKHVSRE-DFFEALEPMLRETEGVTEVTGVPEAYVP 145
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ K SG+ IDL ARL+L IP+DL + D++L+N DE+ +RSLNG RVTD+ILRLVP
Sbjct: 146 IVTTKISGIPIDLTMARLALSSIPDDLTLQDDNLLRNLDERCIRSLNGSRVTDEILRLVP 205
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
++ FR LRC++ WA+++ +YSNV GFLGG+ WA+LVARICQLYP+AV +VSRFF +
Sbjct: 206 NVEVFRDALRCIKLWAQKKAIYSNVNGFLGGVAWAMLVARICQLYPSAVAGAIVSRFFII 265
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QW WP PVLL IE+G L ++VW+PR P D+ H MPIITPAYP M +++NVS ST
Sbjct: 266 MYQWSWPQPVLLKQIEDGPLPVRVWNPRLYPADRSHRMPIITPAYPSMCATHNVSQSTQM 325
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +EF++G EI E + W LF FF Y+ YL++ S + D W G
Sbjct: 326 IMTEEFKKGSEIVEKVIM--GTTQWSELFVKHDFFHKYRYYLQVIASTGDPDLHIKWAGT 383
Query: 309 VESRLRQLTLKIERHTYNMLQCHPH--------------------PGDFSDK-------- 340
VESR+RQL +K+E + ++ HP G+ SD
Sbjct: 384 VESRIRQLVMKLE-YVDSLTLAHPFVKGFEQVTHCLTDDEVRDAAQGEISDAIAKRKKED 442
Query: 341 ------SKPLYCSYF---MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY-TLRKPGMQ 390
+ +Y + F + ++ KQ VG + DI EF + V M+ + M
Sbjct: 443 IEGKEGASVVYSTTFYIGLAIEPKQAGAVGP-RRLDISYPTTEFTKQVKMWEKYDESAMG 501
Query: 391 ISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQT 447
I V H+ LP+ VF G R +P + A SS+T P ++R T
Sbjct: 502 IVVRHIKSTALPDHVFDEGER--QPRSALKRPKTAKGSGKSSNTSPDVPHKKRRLVT 556
>gi|312381415|gb|EFR27171.1| hypothetical protein AND_06288 [Anopheles darlingi]
Length = 1653
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 182/444 (40%), Positives = 268/444 (60%), Gaps = 57/444 (12%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PR+ R D+FG ++L + PEVTE V +A VPV+K
Sbjct: 130 FGSYRLGVHHKGADIDALCVAPRNIDRS-DYFGSFFELLKQQPEVTECRAVEEAFVPVIK 188
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ IDLL+ARL+L IP++ D+ D +L+N D+++VRSLNGCRVTD+ILRLVP I
Sbjct: 189 MNFDGIEIDLLFARLALKEIPDNFDLRDDMLLKNLDQKSVRSLNGCRVTDEILRLVPNID 248
Query: 132 NFRTTLRCMRFWAKRR--------------------------------GVYSNVAGFLGG 159
NFR LR ++ WAKR+ G+YSN G+ GG
Sbjct: 249 NFRLALRTIKLWAKRKLLPHGLISPEGMCDERCFNVRVAFCICLVTGHGIYSNSLGYFGG 308
Query: 160 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNP 219
++WA+LVAR CQLYPNAV + LV +FF V+++W+WP PVLL + +LG QVWDPR N
Sbjct: 309 VSWAMLVARTCQLYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDNVNLGFQVWDPRVNV 368
Query: 220 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 279
+D++HLMPIITPAYP NS++NVS+ST ++M+ EF RG +I + + + WD LFE
Sbjct: 369 QDRFHLMPIITPAYPQQNSTFNVSSSTRKVMLMEFNRGMQITDDIMMGKQ--MWDKLFEA 426
Query: 280 FTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH----- 333
+FF Y++++ + +++ NADD W G VES++R L +ER+ + N+ +P
Sbjct: 427 PSFFYRYRHFIVLLVTSSNADDHLEWCGLVESKIRYLIQNLERNQHINLAHVNPKCYEQH 486
Query: 334 -----------PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSM 381
G ++++ +CS +F+GL+ ++ E D+ +++ F +V
Sbjct: 487 EQNPAATLNAGGGADANQTPAAFCSLWFIGLEFER----TENLNVDLTESIQSFTDSVHK 542
Query: 382 YTLRKPGMQISVAHVTRRNLPNFV 405
+ L K GM+I HV R+ L +++
Sbjct: 543 HALLKDGMKIEARHVRRKQLASYL 566
>gi|116283528|gb|AAH16738.1| PAPOLG protein [Homo sapiens]
Length = 496
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 179/397 (45%), Positives = 248/397 (62%), Gaps = 14/397 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILYLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 450
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHV 396
D+ ++ F V + + K GM+I HV
Sbjct: 451 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHV 487
>gi|308812011|ref|XP_003083313.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
gi|116055193|emb|CAL57589.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
Length = 606
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 184/421 (43%), Positives = 256/421 (60%), Gaps = 32/421 (7%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFG--------ELHQMLTEMPEVTELH 60
L G + VHGP ADIDTLC+GPRH +REEDFFG + ++ + P E+
Sbjct: 89 LYTFGSYRLGVHGPAADIDTLCLGPRHLSREEDFFGFEENDYEGSFYDVMRKHPGTEEIV 148
Query: 61 PVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSLNGCRV 119
PV DA VP +K F G ID+ Y L S +PEDLD+ S+L N D+ V+SLNGCRV
Sbjct: 149 PVRDAIVPEIKTVFRGFEIDMAYTSLPSYTSVPEDLDVCATSVLLNLDDPGVKSLNGCRV 208
Query: 120 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 179
DQ+LR VP FR LR +R WA+RRG+YSNV GF GG+N A+LVAR+CQLYPNA S
Sbjct: 209 ADQLLREVPNHDAFRVALRTLRLWAQRRGIYSNVVGFFGGVNLAILVARVCQLYPNAASS 268
Query: 180 MLVSRFFRVYTQWRWPNPVLLCAI-EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNS 238
MLV FF++++ W+W PV+L I +EG G++VWD R N ++Y LM I+TPAYP NS
Sbjct: 269 MLVYSFFQLWSAWQWSTPVMLVPIVDEGLPGMRVWDERVNKAERYQLMKILTPAYPAQNS 328
Query: 239 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAEN 298
++NVS STL ++ EF+RG E+ + + N+ W+ L+ +F YK+YL + ISA+
Sbjct: 329 TFNVSVSTLEVLKAEFRRGKEVTKNILLNKC--KWEDLWIKTSFLTMYKHYLMVSISAKT 386
Query: 299 ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD--KSKPLYCSYFMG----- 351
A+D + W+GWV SR++ L IE T + HP + D K + + F+G
Sbjct: 387 AEDFKKWEGWVGSRVKLLIQGIENCTGGQMLAHPGTARYKDPEKEENTHVILFLGLFPSS 446
Query: 352 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRK-------PGMQISVAHVTRRNLPNF 404
L++K+ V + ++ V++F+ V+ + R PGMQ V HV R++LP F
Sbjct: 447 LKKKEKVAM------NLNPAVEQFQMQVTSWMDRATGESNWVPGMQAMVRHVKRKDLPGF 500
Query: 405 V 405
V
Sbjct: 501 V 501
>gi|332226879|ref|XP_003262619.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma [Nomascus
leucogenys]
Length = 735
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 178/409 (43%), Positives = 253/409 (61%), Gaps = 16/409 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTGEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCSYFM---------GLQRKQ 356
VES++R L +ER+ + + +P PG+ Y S + + +
Sbjct: 393 VESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFPWDNFSESRKXENAE 452
Query: 357 GVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 405
V + + + T ++QA ++ L K GM+I HV ++ L +++
Sbjct: 453 SVNIXXXQSYIQSFTDTVYRQANNINML-KEGMKIEATHVKKKQLHHYL 500
>gi|194755527|ref|XP_001960043.1| GF13172 [Drosophila ananassae]
gi|190621341|gb|EDV36865.1| GF13172 [Drosophila ananassae]
Length = 835
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 182/423 (43%), Positives = 254/423 (60%), Gaps = 41/423 (9%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PR+ R D+F ++L + PEVTE V +A VPV+K
Sbjct: 109 FGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVPVIK 167
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ IDLL+ARLSL IP+D D+ D++L+N D ++VRSLNGCRVTD+IL LVP I+
Sbjct: 168 MNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIE 227
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR CQLYPNA + LV +FF V+++
Sbjct: 228 NFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSR 287
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WPNPVLL + +L QVWDPR N D+YHLMPIITPAYP NS++NVS ST ++++
Sbjct: 288 WKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVIL 347
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
EF RG I + E + WD LFE +FF Y++++ + ++++ ADD W G VES
Sbjct: 348 TEFNRGMNITD--EIMLGRIPWDRLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVES 405
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSDK-----------------------------SK 342
++R L +ER+ + L H +P F K S
Sbjct: 406 KVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQSANSSQNNSGNEDDLKQSQGSQSSVTSA 464
Query: 343 PLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY----TLRKPGMQISVAHVTR 398
P +F+GL+ ++ E D+ +++ F + V M+ + K GM I HV R
Sbjct: 465 PFCSMWFIGLEFER----SENLNVDLTESIQNFTEHVMMHGVNIKMLKEGMTIDARHVKR 520
Query: 399 RNL 401
+ L
Sbjct: 521 KQL 523
>gi|403173934|ref|XP_003332965.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170759|gb|EFP88546.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 671
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 200/466 (42%), Positives = 270/466 (57%), Gaps = 47/466 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCV PRH TRE FF L ML + PEVTEL VP+A VP
Sbjct: 93 IFTFGSYRLGVHGPGADIDTLCVVPRHITREH-FFEVLPAMLNDRPEVTELATVPEAFVP 151
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K KFS + +DLL+ARL+L IP+ L++ D++L+N D++ VRSL G RVTD+ILRLVP
Sbjct: 152 IIKLKFSSIEVDLLFARLALPSIPDSLELIDDALLKNLDDRCVRSLGGSRVTDEILRLVP 211
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR +LR ++ WAK R VYSNV GF GG+ WA+ VAR+CQLYPN +V+RFF V
Sbjct: 212 DVTVFRDSLRAIKLWAKSRAVYSNVMGFCGGVAWAMCVARVCQLYPNKPAGTIVNRFFAV 271
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
+QW WP+PVLL I G G Q +W+P+ P+D+ H MPIITPAYPCM S++N++ ST
Sbjct: 272 LSQWNWPSPVLLKPIGPGPPGDQRRIWNPKIYPQDRGHRMPIITPAYPCMCSTHNITKST 331
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
+IMM EF+RG + + E W LF+ FF Y+ YL+I S+ NA+ W
Sbjct: 332 AQIMMTEFKRGLAVTD--EIATGTKPWAALFDKHDFFTRYRYYLQITASSPNAEIQLKWA 389
Query: 307 GWVESRLRQLTLKI----------------ERHTYNM-------LQCHPHPGDFSDK--- 340
G VE+RLRQL +K+ ER +Y + +Q P D +
Sbjct: 390 GTVEARLRQLVMKVEEVETVDLAHPFIKGFERESYYLTSDEVRAIQVGDVPPDVKGRTLA 449
Query: 341 -------SKPLYC-SYFMGLQRKQGVPVGEG--EQFDIRLTVKEFKQAVSMYT-LRKPGM 389
S +Y S+F+GL Q P G + DI V EF + V + + M
Sbjct: 450 DIEGKEGSGAVYTSSFFIGLL-VQPKPAGHTGPRKLDISYPVGEFTRMVKQWEGYAEDSM 508
Query: 390 QISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTK 435
I V ++ LP++VF G RPS + S +A +R + K
Sbjct: 509 GIIVRYIKGAQLPDYVFDGEQRPS----ASVPSSKAFKRTKTGKAK 550
>gi|449018860|dbj|BAM82262.1| nuclear poly(A) polymerase [Cyanidioschyzon merolae strain 10D]
Length = 561
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 178/350 (50%), Positives = 232/350 (66%), Gaps = 27/350 (7%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFG-------------ELHQMLTEMPE 55
+ G + V+GPGAD+DTLCV PR R FFG L ML +
Sbjct: 87 IFTFGSYRLGVNGPGADVDTLCVVPRFVERNRYFFGLPDEQGSRAPTQVVLADMLRQDDR 146
Query: 56 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 115
EL V A+VPV+K +F GV +DLL A ++L IP++ +I D++L+N D+ T RSLN
Sbjct: 147 TEELVTVESAYVPVIKIRFMGVDMDLLCAPIALMKIPKNFNILDDAVLRNVDDATQRSLN 206
Query: 116 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 175
G RVTD IL LVP + FRTTLRC++FWAKRRG+YSNV G+LGG+ WA+LVAR+CQLYPN
Sbjct: 207 GVRVTDSILELVPDVDTFRTTLRCIKFWAKRRGIYSNVLGYLGGVAWAMLVARVCQLYPN 266
Query: 176 AVPSMLVSRFFRVYTQWRWPNPVLLCAI----EEGSLGLQVWDPRRNPKDKYHLMPIITP 231
A ++++S FFR+Y+QW+WP PV LC I G L+VWDP +P+D+ HLMPIITP
Sbjct: 267 ATAAVVLSAFFRLYSQWQWPKPVKLCPIIRHQHAGLRQLKVWDP-TDPRDRRHLMPIITP 325
Query: 232 AYPCMNSSYNVSTSTLRIMMDEFQRGHEIC-EAMEKNEAD------VDWDTLFEPFTFFE 284
AYP MNS+YNV+ STLRIMM+EF RG +IC + + +D DW+ L EP FF
Sbjct: 326 AYPSMNSTYNVTHSTLRIMMEEFARGQQICADVLAAAGSDGTGVSPRDWERLLEPSDFFA 385
Query: 285 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP 334
YK+YL+I+I+A N DDL+ W+G VESRLR L ++E + HP P
Sbjct: 386 RYKHYLQIEITAGNMDDLKKWRGHVESRLRLLVQRLE--VLPPVSVHPWP 433
>gi|395329948|gb|EJF62333.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 606
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 203/476 (42%), Positives = 272/476 (57%), Gaps = 53/476 (11%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VHGPG DIDTLCV PRH TRE DFF L ML EM VTE+ VP+A VP++K
Sbjct: 88 FGSYRLGVHGPGTDIDTLCVVPRHVTRE-DFFNVLEGMLREMEGVTEVSGVPEAFVPIIK 146
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
+ SG+ IDLL+A+LSL IP+DLD+ D++L+N DE+ VRSLNG RV ++ILRLVP +
Sbjct: 147 TEISGIPIDLLFAQLSLAAIPDDLDLRDDNLLKNLDERCVRSLNGSRVINEILRLVPNVD 206
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
FR LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQLYPNAV +VSRFF + +
Sbjct: 207 VFRDALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNAVAGAIVSRFFIIMHR 266
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W WP PVLL IE+G L ++VW+PR P+D+ H MPIITPAYP M +++NV ST +IM
Sbjct: 267 WSWPQPVLLKPIEDGPLQVRVWNPRLYPQDRNHRMPIITPAYPSMCATHNVMASTQQIMT 326
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
+EF+RG EI + + E V W LF FF Y+ YL++ S+ + D W G VES
Sbjct: 327 EEFKRGSEIVDQVISGE--VQWSALFAKHDFFFRYRFYLQVIASSPDLDTQNKWSGTVES 384
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDF---------------------------------- 337
++RQL +++E + HP F
Sbjct: 385 KIRQLVMRLE-FVDTLKLAHPFIKGFDTVYYCLSEDETRAVARGEIPEAVANRKQEDIAG 443
Query: 338 SDKSKPLYC-SYFMGLQRKQGVPVGEG-EQFDIRLTVKEFKQAVSMY-TLRKPGMQISVA 394
+ + +Y S+F+GL K G + DI EF + V ++ + M I V
Sbjct: 444 KEGATTMYTKSFFVGLSIKPKEAGATGPRKLDISYPTNEFIKMVRLWEKYDESQMNIVVR 503
Query: 395 HVTRRNLPNFVFPGGVR--PSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTD 448
H+ LP+FVF G R +RP K R ++ P R R ++D
Sbjct: 504 HIKHTALPDFVFDKGEREAAARPKK----------RSRTAKESPAPSAKRSRMESD 549
>gi|194881425|ref|XP_001974840.1| GG20896 [Drosophila erecta]
gi|190658027|gb|EDV55240.1| GG20896 [Drosophila erecta]
Length = 818
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 182/438 (41%), Positives = 261/438 (59%), Gaps = 41/438 (9%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PR+ R D+F ++L + PEVTE V +A VPV+K
Sbjct: 110 FGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVPVIK 168
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ IDLL+ARLSL IP+D D+ D++L+N D ++VRSLNGCRVTD+IL LVP I+
Sbjct: 169 MNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIE 228
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR CQLYPNA + LV +FF V+++
Sbjct: 229 NFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSR 288
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WPNPVLL + +L QVWDPR N D+YHLMPIITPAYP NS++NVS ST ++++
Sbjct: 289 WKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVIL 348
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
EF RG I + E + W+ LFE +FF Y++++ + ++++ ADD W G VES
Sbjct: 349 TEFNRGMNITD--EIMLGRISWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVES 406
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSDK-----------------------------SK 342
++R L +ER+ + L H +P F + S
Sbjct: 407 KVRLLIGNLERNPHIAL-AHVNPKCFEFRKGQSANNSQNNSGNEDDLKQSQGNQSAVTSA 465
Query: 343 PLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY----TLRKPGMQISVAHVTR 398
P +F+GL+ ++ E D+ +++ F + V+M+ + K GM I HV R
Sbjct: 466 PFCSMWFIGLEFER----SENLNVDLTESIQNFTEHVTMHGVNIKMLKEGMTIDARHVKR 521
Query: 399 RNLPNFVFPGGVRPSRPS 416
+ L ++ ++ R S
Sbjct: 522 KQLSLYLDSDFLKRERKS 539
>gi|392568429|gb|EIW61603.1| polymerase [Trametes versicolor FP-101664 SS1]
Length = 607
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 204/500 (40%), Positives = 287/500 (57%), Gaps = 57/500 (11%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VHGPGADIDTLCV PRH TR+ DFF L ML EM VTE+ VP+A+VP++
Sbjct: 88 FGSYRLGVHGPGADIDTLCVAPRHVTRD-DFFNVLEGMLREMEGVTEVSGVPEAYVPIIS 146
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
+ SG+ IDLL+A+L L +IPEDLD+ D++L+N DE+++RSLNG RV ++ILRLVP +
Sbjct: 147 TEISGIPIDLLFAQLDLPIIPEDLDLQDDNLLRNLDEKSIRSLNGSRVINEILRLVPNVD 206
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
FRT LRC++ WA++R VYSNV GFLGG+ WA+LVAR+CQLYPNAV +VSRFF + +
Sbjct: 207 VFRTALRCIKLWAQKRAVYSNVNGFLGGVAWAMLVARVCQLYPNAVAGAIVSRFFVIMHK 266
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W WP PVLL IE+G L ++VW+P+ +D+ H MPIITPAYP M +++NV ST +IM
Sbjct: 267 WSWPQPVLLKPIEDGPLQVRVWNPKVYSQDRSHRMPIITPAYPSMCATHNVMQSTQQIMK 326
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
+EFQRG I + + +A +W LF FF+ Y+ YL++ ++ + + W G V S
Sbjct: 327 EEFQRGCAIVDDVMLGKA--EWSALFVKHDFFQRYRFYLQVVAASRDLEMQNKWSGTVAS 384
Query: 312 RLRQLTLKIERHTYNMLQCHP--------------------------------HPGDFSD 339
++RQL +++E + + HP D +D
Sbjct: 385 KIRQLVMRLE-YVDALKLAHPFIKGFDVVYYCLSEEEAQVVTRGEIPPAVAQRKKEDVAD 443
Query: 340 KSKPLYC---SYFMGLQRKQGVPVGEG-EQFDIRLTVKEFKQAVSMY-TLRKPGMQISVA 394
K + S+F+GL K G + DI EF + M+ + M I+V
Sbjct: 444 KEGVITVHTTSFFIGLSIKPKEAGSTGPRRLDISYPTTEFVKMTKMWEKYDESAMHIAVR 503
Query: 395 HVTRRNLPNFVFPGGVR--PSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVD 452
H+ LP+FVF G R SRP+K + R + P KR +TD VD
Sbjct: 504 HIKHTVLPDFVFEPGEREAASRPTKRS--------RSIKDSPAPAT----KRSRTDLGVD 551
Query: 453 THLR--NAKCHATMPSSSGE 470
R ++ +P+SS +
Sbjct: 552 MQSRPTSSASSTRLPASSSQ 571
>gi|195335951|ref|XP_002034618.1| GM19819 [Drosophila sechellia]
gi|194126588|gb|EDW48631.1| GM19819 [Drosophila sechellia]
Length = 814
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 181/426 (42%), Positives = 255/426 (59%), Gaps = 41/426 (9%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PR+ R D+F ++L + PEVTE V +A VP
Sbjct: 105 IYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVP 163
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ IDLL+ARLSL IP+D D+ D++L+N D ++VRSLNGCRVTD+IL LVP
Sbjct: 164 VIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVP 223
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR CQLYPNA + LV +FF V
Sbjct: 224 NIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLV 283
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W+WPNPVLL + +L QVWDPR N D+YHLMPIITPAYP NS++NVS ST +
Sbjct: 284 FSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKK 343
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+++ EF RG I + E + W+ LFE +FF Y++++ + ++++ ADD W G
Sbjct: 344 VILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGL 401
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDK---------------------------- 340
VES++R L +ER+ + L H +P F K
Sbjct: 402 VESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQSANNSQNNSGNEDDLKQSQGNQSAV 460
Query: 341 -SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY----TLRKPGMQISVAH 395
S P +F+GL+ ++ E D+ +++ F + V M+ + K GM I H
Sbjct: 461 TSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTEHVMMHGVNIKMLKEGMTIDARH 516
Query: 396 VTRRNL 401
V R+ L
Sbjct: 517 VKRKQL 522
>gi|195584945|ref|XP_002082256.1| GD25311 [Drosophila simulans]
gi|194194265|gb|EDX07841.1| GD25311 [Drosophila simulans]
Length = 815
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 181/426 (42%), Positives = 255/426 (59%), Gaps = 41/426 (9%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PR+ R D+F ++L + PEVTE V +A VP
Sbjct: 105 IYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVP 163
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ IDLL+ARLSL IP+D D+ D++L+N D ++VRSLNGCRVTD+IL LVP
Sbjct: 164 VIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVP 223
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR CQLYPNA + LV +FF V
Sbjct: 224 NIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLV 283
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W+WPNPVLL + +L QVWDPR N D+YHLMPIITPAYP NS++NVS ST +
Sbjct: 284 FSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKK 343
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+++ EF RG I + E + W+ LFE +FF Y++++ + ++++ ADD W G
Sbjct: 344 VILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGL 401
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDK---------------------------- 340
VES++R L +ER+ + L H +P F K
Sbjct: 402 VESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQSANNSQNNSGNEDDLKQSQGNQSAV 460
Query: 341 -SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY----TLRKPGMQISVAH 395
S P +F+GL+ ++ E D+ +++ F + V M+ + K GM I H
Sbjct: 461 TSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTEHVMMHGVNIKMLKEGMTIDARH 516
Query: 396 VTRRNL 401
V R+ L
Sbjct: 517 VKRKQL 522
>gi|195487053|ref|XP_002091755.1| GE13836 [Drosophila yakuba]
gi|194177856|gb|EDW91467.1| GE13836 [Drosophila yakuba]
Length = 820
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 181/423 (42%), Positives = 254/423 (60%), Gaps = 41/423 (9%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PR+ R D+F ++L + PEVTE V +A VPV+K
Sbjct: 108 FGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVPVIK 166
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ IDLL+ARLSL IP+D D+ D++L+N D ++VRSLNGCRVTD+IL LVP I+
Sbjct: 167 MNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIE 226
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR CQLYPNA + LV +FF V+++
Sbjct: 227 NFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSR 286
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WPNPVLL + +L QVWDPR N D+YHLMPIITPAYP NS++NVS ST ++++
Sbjct: 287 WKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVIL 346
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
EF RG I + E + W+ LFE +FF Y++++ + ++++ ADD W G VES
Sbjct: 347 TEFNRGMNITD--EIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVES 404
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSDK-----------------------------SK 342
++R L +ER+ + L H +P F K S
Sbjct: 405 KVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQSANNSQNNSGNEDDLKQSQGSQSAVTSA 463
Query: 343 PLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY----TLRKPGMQISVAHVTR 398
P +F+GL+ ++ E D+ +++ F + V M+ + K GM I HV R
Sbjct: 464 PFCSMWFIGLEFER----SENLNVDLTESIQNFTEHVMMHGVNIKMLKEGMTIDARHVKR 519
Query: 399 RNL 401
+ L
Sbjct: 520 KQL 522
>gi|442624286|ref|NP_001261097.1| hiiragi, isoform D [Drosophila melanogaster]
gi|440214537|gb|AGB93629.1| hiiragi, isoform D [Drosophila melanogaster]
Length = 827
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/441 (41%), Positives = 261/441 (59%), Gaps = 41/441 (9%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PR+ R D+F ++L + PEVTE V +A VP
Sbjct: 105 IYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVP 163
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ IDLL+ARLSL IP+D D+ D++L+N D ++VRSLNGCRVTD+IL LVP
Sbjct: 164 VIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVP 223
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR CQLYPNA + LV +FF V
Sbjct: 224 NIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLV 283
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W+WPNPVLL + +L QVWDPR N D+YHLMPIITPAYP NS++NVS ST +
Sbjct: 284 FSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKK 343
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+++ EF RG I + E + W+ LFE +FF Y++++ + ++++ ADD W G
Sbjct: 344 VILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGL 401
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDK---------------------------- 340
VES++R L +ER+ + L H +P F K
Sbjct: 402 VESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQSANNSQNNSGNEDDLKQSQGNQSAV 460
Query: 341 -SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY----TLRKPGMQISVAH 395
S P +F+GL+ ++ E D+ +++ F + V M+ + K GM I H
Sbjct: 461 TSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTEHVMMHGVNIKMLKEGMTIDARH 516
Query: 396 VTRRNLPNFVFPGGVRPSRPS 416
V R+ L ++ ++ R S
Sbjct: 517 VKRKQLSLYLDSDFLKRERKS 537
>gi|443716054|gb|ELU07731.1| hypothetical protein CAPTEDRAFT_223399 [Capitella teleta]
Length = 657
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 177/404 (43%), Positives = 259/404 (64%), Gaps = 14/404 (3%)
Query: 1 MPRYLPLVLIG----LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEV 56
MP L V+ G G + V+ GADIDTLCV PRH R DFFG + L + PEV
Sbjct: 84 MPESLIEVVGGGVYTFGSYRLGVNTKGADIDTLCVAPRHVLRS-DFFGSFFESLKQHPEV 142
Query: 57 TELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNG 116
+ V +A VPV+K +F G+ +D+L+ARL+L V+ E+ ++ +S+L+N D + +RSLNG
Sbjct: 143 KDCRAVEEAFVPVIKMEFDGIELDMLFARLALQVVEENQNLRDESLLKNLDIRCIRSLNG 202
Query: 117 CRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA 176
CRVTD+IL LVP I++FR TLR ++ WAK++G+YSN GFLGG++WA+LVAR CQLYP+A
Sbjct: 203 CRVTDEILHLVPNIESFRMTLRAVKLWAKKKGIYSNALGFLGGVSWAMLVARTCQLYPHA 262
Query: 177 VPSMLVSRFFRVYTQWRWPNPVLLCAI-EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 235
P+ L+ +FF ++++W WP PVLL + +E L VWDPR N D++HLMPIITPAYP
Sbjct: 263 CPATLLQKFFMLFSKWDWPAPVLLKQMSDENKLSHTVWDPRVNVSDRFHLMPIITPAYPQ 322
Query: 236 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 295
NS+YNVS ST +IMMDEF+ + + N+ +W +LF+P FF+ YK+Y+ +
Sbjct: 323 QNSTYNVSNSTRQIMMDEFKEALVVANNVYANKD--EWGSLFQPSDFFQKYKHYIVLVAR 380
Query: 296 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF---SDKSKPLYCSYFMGL 352
++ D W G VES++R L +E++ + + H +P F D P +F+GL
Sbjct: 381 SDTEDHQLEWVGLVESKIRILVGNLEKNPF-ICIAHVNPKSFGPNEDDESPYIAKWFVGL 439
Query: 353 QRKQGVPVGEGEQFDIRLTVK-EFKQAVSMYTLRKPGMQISVAH 395
K G +DI+ + ++QA+++ L+K GM++ V H
Sbjct: 440 IFKTGTQTNIDLTYDIQNFMDIVYRQALTINLLKK-GMEVEVKH 482
>gi|195057028|ref|XP_001995187.1| GH22767 [Drosophila grimshawi]
gi|193899393|gb|EDV98259.1| GH22767 [Drosophila grimshawi]
Length = 857
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 187/448 (41%), Positives = 264/448 (58%), Gaps = 51/448 (11%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PR+ R D+F ++L + PEVTE V +A VPV+K
Sbjct: 106 FGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVPVIK 164
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ IDLL+ARLSL IP+D D+ D++L+N D ++VRSLNGCRVTD+IL LVP I+
Sbjct: 165 MNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLKNLDPRSVRSLNGCRVTDEILALVPNIE 224
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR CQLYPNA + LV +FF V+++
Sbjct: 225 NFRLALRAIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSR 284
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WPNPVLL + +L QVWDPR N D+YHLMPIITPAYP NS++NVS ST ++++
Sbjct: 285 WKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVIL 344
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
EF RG I + E V+WD LFE +FF Y++++ + ++++ ADD W G VES
Sbjct: 345 TEFNRGMSITD--EIMLGRVNWDRLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVES 402
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSDKS------------------------------ 341
++R L +ER+ + L H +P F K
Sbjct: 403 KVRLLIGNLERNPHIAL-AHVNPKCFELKKGAVTANNSQNNSGNEDDLKQQQQQQQQQKD 461
Query: 342 -KPL-------YCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY----TLRKPG 388
KP +CS +F+GL+ ++ E D+ +++ F + V M+ + K G
Sbjct: 462 EKPATSTVAAPFCSLWFIGLEFER----SENLNIDLTESIQNFTEHVIMHGVNIKMLKEG 517
Query: 389 MQISVAHVTRRNLPNFVFPGGVRPSRPS 416
M I HV R+ L ++ ++ R S
Sbjct: 518 MAIDARHVKRKQLSVYLDADFLKRERKS 545
>gi|21064419|gb|AAM29439.1| RE25878p [Drosophila melanogaster]
Length = 659
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 181/423 (42%), Positives = 254/423 (60%), Gaps = 41/423 (9%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PR+ R D+F ++L + PEVTE V +A VPV+K
Sbjct: 108 FGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVPVIK 166
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ IDLL+ARLSL IP+D D+ D++L+N D ++VRSLNGCRVTD+IL LVP I+
Sbjct: 167 MNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIE 226
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR CQLYPNA + LV +FF V+++
Sbjct: 227 NFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSR 286
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WPNPVLL + +L QVWDPR N D+YHLMPIITPAYP NS++NVS ST ++++
Sbjct: 287 WKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVIL 346
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
EF RG I + E + W+ LFE +FF Y++++ + ++++ ADD W G VES
Sbjct: 347 TEFNRGMNITD--EIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVES 404
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSDK-----------------------------SK 342
++R L +ER+ + L H +P F K S
Sbjct: 405 KVRLLISNLERNPHIAL-AHVNPKCFEFKKGQSANNSQNNSGNEDDLKQSQGNQSAVTSA 463
Query: 343 PLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY----TLRKPGMQISVAHVTR 398
P +F+GL+ ++ E D+ +++ F + V M+ + K GM I HV R
Sbjct: 464 PFCSMWFIGLEFER----SENLNVDLTESIQNFTEHVMMHGVNIKMLKEGMTIDARHVKR 519
Query: 399 RNL 401
+ L
Sbjct: 520 KQL 522
>gi|392568430|gb|EIW61604.1| poly-A polymerase [Trametes versicolor FP-101664 SS1]
Length = 652
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 188/446 (42%), Positives = 256/446 (57%), Gaps = 47/446 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCV P+H +RE DFF ML E V E+ VPDA+VP
Sbjct: 94 IFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DFFDVFEDMLKETEGVIEVSGVPDAYVP 152
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K K SG+ IDL+ ARL+L I +DL + D++L+N DE+ VRSLNG RVTD+ILRLVP
Sbjct: 153 IIKTKISGIPIDLVMARLALSTISDDLSLQDDNLLRNLDERCVRSLNGSRVTDEILRLVP 212
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQLYPNA+ +VSRFF +
Sbjct: 213 NVTVFRNALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNAIAGAIVSRFFII 272
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QW WP PV+L IE+G L ++VW+P+ P D+ H MPIITPAYP M +++NV+ ST
Sbjct: 273 MYQWTWPQPVMLKPIEDGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATHNVTQSTQM 332
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +EF++ +I + + +A W LF FF Y+ YL++ S D W G
Sbjct: 333 IMTEEFKKASDIVDNIIVGKA--SWSDLFAKHDFFHKYRYYLQVIASTGGPDVQIKWSGT 390
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC---------------------- 346
VESR+RQL +K+E + ++ HP F S YC
Sbjct: 391 VESRIRQLVMKLE-YVESLALAHPFIKGFEQVS---YCLTDEEVRAVAQGEISEAIAKRK 446
Query: 347 ----------------SYFMGLQRKQGVPVGEG-EQFDIRLTVKEFKQAVSMY-TLRKPG 388
++++GL + P G + DI EF + V M+ +
Sbjct: 447 KEDIEGVEGGSAVYSTTFYIGLVVEPRQPGSVGPRRLDISYPTTEFTKLVKMWEKFDENK 506
Query: 389 MQISVAHVTRRNLPNFVFPGGVRPSR 414
M I V H+ LP++VF G R R
Sbjct: 507 MGIVVRHIRSAILPDYVFDEGERQPR 532
>gi|17985991|ref|NP_536790.1| hiiragi, isoform A [Drosophila melanogaster]
gi|24655907|ref|NP_725919.1| hiiragi, isoform B [Drosophila melanogaster]
gi|116007728|ref|NP_001036562.1| hiiragi, isoform C [Drosophila melanogaster]
gi|7110522|gb|AAF36978.1|AF231704_1 poly A polymerase [Drosophila melanogaster]
gi|9453846|dbj|BAB03279.1| poly A polymerase [Drosophila melanogaster]
gi|21626946|gb|AAF57528.2| hiiragi, isoform A [Drosophila melanogaster]
gi|21626947|gb|AAM68424.1| hiiragi, isoform B [Drosophila melanogaster]
gi|25012374|gb|AAN71296.1| RE09914p [Drosophila melanogaster]
gi|113194668|gb|ABI31107.1| hiiragi, isoform C [Drosophila melanogaster]
gi|211938509|gb|ACJ13151.1| FI03258p [Drosophila melanogaster]
gi|220942518|gb|ACL83802.1| hrg-PA [synthetic construct]
gi|220952732|gb|ACL88909.1| hrg-PA [synthetic construct]
Length = 659
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 181/423 (42%), Positives = 254/423 (60%), Gaps = 41/423 (9%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PR+ R D+F ++L + PEVTE V +A VPV+K
Sbjct: 108 FGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVPVIK 166
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ IDLL+ARLSL IP+D D+ D++L+N D ++VRSLNGCRVTD+IL LVP I+
Sbjct: 167 MNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIE 226
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR CQLYPNA + LV +FF V+++
Sbjct: 227 NFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSR 286
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WPNPVLL + +L QVWDPR N D+YHLMPIITPAYP NS++NVS ST ++++
Sbjct: 287 WKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVIL 346
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
EF RG I + E + W+ LFE +FF Y++++ + ++++ ADD W G VES
Sbjct: 347 TEFNRGMNITD--EIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVES 404
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSDK-----------------------------SK 342
++R L +ER+ + L H +P F K S
Sbjct: 405 KVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQSANNSQNNSGNEDDLKQSQGNQSAVTSA 463
Query: 343 PLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY----TLRKPGMQISVAHVTR 398
P +F+GL+ ++ E D+ +++ F + V M+ + K GM I HV R
Sbjct: 464 PFCSMWFIGLEFER----SENLNVDLTESIQNFTEHVMMHGVNIKMLKEGMTIDARHVKR 519
Query: 399 RNL 401
+ L
Sbjct: 520 KQL 522
>gi|357621141|gb|EHJ73080.1| poly a polymerase [Danaus plexippus]
Length = 615
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 190/475 (40%), Positives = 268/475 (56%), Gaps = 42/475 (8%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PRH R D+F +++L E P+V +L V DA VPV+K
Sbjct: 111 FGSYRLGVHHRGADIDALCVAPRHIDRS-DYFQSFYELLKEQPQVKDLRAVEDAFVPVIK 169
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ IDLL+ARL+L IP+ D+ D +L+N D++ VRSLNGCRVTD+ILRLVP I
Sbjct: 170 MNFDGIEIDLLFARLALKEIPDSFDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPDIN 229
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
FR TLR ++ WAKR G+YSN G+LGG++WA+LVAR CQLYPNA+P+ L+ +FF V++Q
Sbjct: 230 TFRLTLRAIKLWAKRHGIYSNTLGYLGGVSWAMLVARTCQLYPNALPATLLHKFFLVFSQ 289
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WP PVLL + +LG VWDPR N D+YHLMPIITPAYP NS++NVS+ST ++M
Sbjct: 290 WKWPQPVLLKPPDSVNLGFPVWDPRVNMSDRYHLMPIITPAYPQQNSTFNVSSSTRTVIM 349
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
+EF+ G I + E W+ LFE FF YK+++ + S+ N D W G VES
Sbjct: 350 EEFRLGLAITD--EIMLGKCGWERLFEAANFFSRYKHFIVLLASSANTLDQLPWCGLVES 407
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQ------ 365
++R L +ER+ + + H +P ++ S PL + L G PV E
Sbjct: 408 KIRHLITTLERNQHITI-AHVNPECYN--SVPLNTNNGHPLALPPGTPVQTEEHGAAEVK 464
Query: 366 --------------------------FDIRLTVKEFKQAVSMYT----LRKPGMQISVAH 395
D+ + F +AV + + GM I H
Sbjct: 465 NDKGEIVANVCSMWFIGLVFDKTNVNVDLTYDISSFTKAVHYQAENTNVLREGMTIEARH 524
Query: 396 VTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDN 450
V R+ L ++ P +R + +K ++ +K ++ AD+ T+D+
Sbjct: 525 VRRKQLHQYLSPSLLRREKVNKRKNETLAVHTKKAKRVSESSADEVSVLSYTEDS 579
>gi|218847770|ref|NP_001136382.1| poly(A) polymerase alpha [Xenopus (Silurana) tropicalis]
gi|197246240|gb|AAI68811.1| Unknown (protein for MGC:188992) [Xenopus (Silurana) tropicalis]
Length = 732
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 187/416 (44%), Positives = 260/416 (62%), Gaps = 17/416 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF ++ L + EV +L V +A VP
Sbjct: 94 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFSSFYEKLKQQEEVKDLRSVEEAFVP 152
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 153 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 212
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 213 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 272
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 273 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRA 332
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + +A +W LF+ FF+ YK+Y+ + SA W G
Sbjct: 333 VMVEEFKQGLAITDEILLGKA--EWSKLFDAPNFFQKYKHYILLLASAPTEKQRLEWVGL 390
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + ++K + + +GL K+ + E
Sbjct: 391 VESKIRILVGSLEKNEFITLAHVNPQSFPAPSENTEKEE-FRTMWVIGLVFKK-MENSEN 448
Query: 364 EQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 414
D+ ++ F +QA++ M+I+ HV R+ L + + P V P +
Sbjct: 449 LSVDLTYDIQSFTDTVYRQAINSKMFEN-EMKIAAMHVKRKQL-HQLLPSHVLPKK 502
>gi|242024112|ref|XP_002432474.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
gi|212517907|gb|EEB19736.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
Length = 625
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 176/408 (43%), Positives = 253/408 (62%), Gaps = 10/408 (2%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PRH R D+F +++L E EV++L V +A VPV+K
Sbjct: 111 FGSYRLGVHQKGADIDALCVAPRHIDRS-DYFTSFYELLKEQKEVSQLRSVENAFVPVIK 169
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ IDLL+ARL+L IP+D+D+ D +L+N D++ VRSLNGCRVTD+ILRLVP +
Sbjct: 170 MNFDGIEIDLLFARLALKEIPDDMDLKDDYLLKNLDQKCVRSLNGCRVTDEILRLVPNKE 229
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAK+ VYSN G+LGG++WA+LVAR CQLYPNAV + LV +FF V+++
Sbjct: 230 NFRLALRVIKLWAKKHRVYSNALGYLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSK 289
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WP PVLL + +L VWDPR N D+YHLMPIITPAYP NS++NVS ST IM
Sbjct: 290 WKWPQPVLLKQPDTLNLNFPVWDPRVNVSDRYHLMPIITPAYPQQNSTFNVSLSTRSIMQ 349
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
DE + G I E + + W+ LFE FF Y++Y+ + +S+ + +D W G VES
Sbjct: 350 DELKLGLSITEDIMLGKC--GWEKLFETSHFFSKYRHYIVLLLSSNSPEDQLEWCGLVES 407
Query: 312 RLRQLTLKIER-HTYNMLQCHPHPGDFSDKSKP---LYCS-YFMGLQRKQGVPVGEGEQF 366
++R L +ER H N+ H +P F +P + C+ +F+G+ + + +
Sbjct: 408 KIRLLVGNLERNHHINL--AHVNPDSFQQPQEPDSNVLCTMWFIGVVFAKTGNLNVDLTY 465
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 414
DI + + K GM++ +V R+ L +++ P ++ +
Sbjct: 466 DIMSFTDTVVRQARASNIWKEGMKVVAKYVKRKELTSYLSPSVLKKEK 513
>gi|344274222|ref|XP_003408916.1| PREDICTED: poly(A) polymerase alpha-like [Loxodonta africana]
Length = 739
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 192/414 (46%), Positives = 257/414 (62%), Gaps = 24/414 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P D DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKDNPDKEE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F +QA++ M+ + M+I+ HV RR LPN V
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRRQLHQLLPNHVL 502
>gi|72012045|ref|XP_780989.1| PREDICTED: poly(A) polymerase gamma [Strongylocentrotus purpuratus]
Length = 670
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 183/403 (45%), Positives = 250/403 (62%), Gaps = 24/403 (5%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADIDTLCV P H R DFF + ++ +PE + V +A VPV+K
Sbjct: 94 FGSYRLGVHTKGADIDTLCVAPLHVERS-DFFKSFYDIVKALPETKDCRAVEEAFVPVIK 152
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ +D+L+ARL+L V+PE+LD++ DS+L+N D + VRSLNGCRVTD+IL +VP +
Sbjct: 153 LVFDGIEMDILFARLALRVVPENLDLTDDSLLKNLDPKCVRSLNGCRVTDEILNVVPSKE 212
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR TLR ++ WAK++GVYSN GFLGG++WA+LVAR CQLYPNA S LV++FF V+T+
Sbjct: 213 NFRLTLRTIKLWAKKKGVYSNALGFLGGVSWAMLVARTCQLYPNAAASTLVNKFFLVFTK 272
Query: 192 WRWPNPVLLCAIEEGS-LGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIM 250
W WP PVLL + LG WDPR N D++HLMPIITPAYP NS+YNVS ST ++
Sbjct: 273 WAWPQPVLLKPPNTSTELGFAEWDPRVNVSDRFHLMPIITPAYPQQNSTYNVSQSTKTVI 332
Query: 251 MDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVE 310
E Q G I + + + +A W+ LFE FF YK+Y+ + SA N DD W G VE
Sbjct: 333 EQELQGGLAITQEIMQGKA--TWEKLFESSNFFGKYKHYIVLIASAGNEDDHLKWVGLVE 390
Query: 311 SRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS-----------YFMGLQRKQGVP 359
S++R L +ER+ + L H +P S S PL S +F+GL+ + P
Sbjct: 391 SKIRVLVGNLERNPHIKL-AHVYPKSIS-PSTPLDGSEEEKTDEHSTLWFIGLEFQ---P 445
Query: 360 VGEGEQFDIRLTVKEFKQAVSMYT----LRKPGMQISVAHVTR 398
+G ++ L ++ F V ++ L + GM+I HV R
Sbjct: 446 LGPATNVNLTLDIQFFVNTVHRHSVTIKLLQEGMKIEAKHVKR 488
>gi|390601592|gb|EIN10986.1| Poly(A) polymerase [Punctularia strigosozonata HHB-11173 SS5]
Length = 582
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 200/476 (42%), Positives = 273/476 (57%), Gaps = 50/476 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCV P+H +REE +F + L EM VTE+ VP+A VP
Sbjct: 85 IFTFGSYRLGVHGPGSDIDTLCVVPKHVSREE-WFDVFERRLREMDGVTEVSGVPEAFVP 143
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K K G+ ID ARL+L IPEDLD+S D++L+N DE+ VRSLNG RVTD ILRLVP
Sbjct: 144 VIKAKVLGIPIDFTMARLALSSIPEDLDLSDDNLLRNLDERCVRSLNGSRVTDAILRLVP 203
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
++ FR LRC++ WA R+ +YSNV GFLGG+ WA+LVAR+CQLYPNA +VSRFF +
Sbjct: 204 EVNVFRVALRCIKLWATRKAIYSNVNGFLGGVAWAMLVARVCQLYPNACAGAIVSRFFII 263
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QW+WP PVLL IEEG L ++VW+P+ P D+ H MPIITPAYP M +++NV ST
Sbjct: 264 MYQWKWPQPVLLKTIEEGPLNVRVWNPKLYPTDRAHRMPIITPAYPAMCATHNVMASTQM 323
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
I+ +E ++G E+ E + A DW LF FF+ Y+ YL++ S NAD W G
Sbjct: 324 IITEELKKGSELVEKIIVGTA--DWSELFIKHDFFDKYRYYLQVIASTGNADLQLKWSGT 381
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC---------------------- 346
VESR+RQL +K+E + ++ HP F S YC
Sbjct: 382 VESRIRQLVMKLE-YVDSLTLAHPFIKGFEQVS---YCLSDEEVRAVAQGEISETVKKRV 437
Query: 347 ----------------SYFMGLQRKQGVPVGEG-EQFDIRLTVKEFKQAVSMY-TLRKPG 388
++++GL + P G + DI EF + V M+ +
Sbjct: 438 LEDIKDKEGASTVYTTTFYIGLAIEPKQPGSNGPRKLDISYPTTEFTKLVKMWEKFDEAK 497
Query: 389 MQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKR 444
M I V H+ LP++VF G R +RP K S+ + + S +T P + ++R
Sbjct: 498 MGIVVRHIRHTALPDYVFGEGGRQTRPQKRPKTSKNSGQ---SGNTSPEQPNKKRR 550
>gi|195380742|ref|XP_002049128.1| GJ21414 [Drosophila virilis]
gi|194143925|gb|EDW60321.1| GJ21414 [Drosophila virilis]
Length = 880
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 183/441 (41%), Positives = 260/441 (58%), Gaps = 44/441 (9%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PR+ R D+F ++L + PEVTE V +A VPV+K
Sbjct: 119 FGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVPVIK 177
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ IDLL+ARLSL IP+D D+ D++L+N D ++VRSLNGCRVTD+IL LVP I+
Sbjct: 178 MNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLKNLDPRSVRSLNGCRVTDEILALVPNIE 237
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR CQLYPNA + LV +FF V+++
Sbjct: 238 NFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSR 297
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WPNPVLL + +L VWDPR N D+YHLMPIITPAYP NS++NVS ST ++++
Sbjct: 298 WKWPNPVLLKHPDNVNLRFPVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVIL 357
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
EF RG I + E V WD LFE +FF Y++++ + ++++ ADD W G VES
Sbjct: 358 TEFNRGMSITD--EIMLGRVSWDRLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVES 415
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSDK------------------------------- 340
++R L +ER+ + +L H +P F K
Sbjct: 416 KVRLLIGNLERNPHIVL-AHVNPKCFELKKGAASANNSQNNSGNEEDLKQQQQQPAQTAV 474
Query: 341 -SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAH 395
+ P +F+GL+ ++ E D+ +++ F + V M+ L K GM I H
Sbjct: 475 TTAPFCSLWFIGLEFER----SENLNIDLTESIQNFTEHVIMHGLNIKMLKEGMAIDARH 530
Query: 396 VTRRNLPNFVFPGGVRPSRPS 416
+ R+ L ++ ++ R S
Sbjct: 531 LKRKQLSLYLDADFLKRERKS 551
>gi|395504561|ref|XP_003756616.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
Length = 739
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 191/414 (46%), Positives = 258/414 (62%), Gaps = 24/414 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF ++ L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYEKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F +QA++ M+ + M+I+ HV RR LPN V
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHVKRRQLHQLLPNHVL 502
>gi|449280702|gb|EMC87938.1| Poly(A) polymerase alpha, partial [Columba livia]
Length = 736
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 187/405 (46%), Positives = 256/405 (63%), Gaps = 20/405 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF ++ L + EV +L V +A VP
Sbjct: 94 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEKLKQQEEVKDLRAVEEAFVP 152
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 153 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 212
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 213 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 272
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 273 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 332
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 333 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 390
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 391 VESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEE-YRTMWVIGLVFKK-TENSEN 448
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 401
D+ ++ F +QA++ M+ + M+I+ HV R+ L
Sbjct: 449 LSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAARHVKRKQL 490
>gi|126290553|ref|XP_001375249.1| PREDICTED: poly(A) polymerase alpha-like [Monodelphis domestica]
Length = 738
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 191/414 (46%), Positives = 258/414 (62%), Gaps = 24/414 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF ++ L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYEKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F +QA++ M+ + M+I+ HV RR LPN V
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHVKRRQLHQLLPNHVL 502
>gi|326921016|ref|XP_003206760.1| PREDICTED: poly(A) polymerase alpha-like [Meleagris gallopavo]
Length = 752
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 190/414 (45%), Positives = 259/414 (62%), Gaps = 24/414 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF ++ L + EV +L V +A VP
Sbjct: 110 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEKLKQQEEVKDLRAVEEAFVP 168
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 169 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 228
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 229 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 288
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 289 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 348
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 349 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 406
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 407 VESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEE-YRTMWVIGLVFKK-TENSEN 464
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F +QA++ M+ + M+I+ HV R+ LPN V
Sbjct: 465 LSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAARHVKRKQLHQLLPNHVL 515
>gi|327259110|ref|XP_003214381.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Anolis carolinensis]
Length = 771
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 188/405 (46%), Positives = 255/405 (62%), Gaps = 20/405 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF ++ L EV +L V +A VP
Sbjct: 128 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYEKLKLQEEVKDLRAVEEAFVP 186
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 187 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 246
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 247 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 306
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 307 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 366
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 367 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 424
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 425 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 482
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 401
D+ ++ F +QA++ M+ + M+I+ HV RR L
Sbjct: 483 LSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHVKRRQL 524
>gi|224141615|ref|XP_002324162.1| predicted protein [Populus trichocarpa]
gi|222865596|gb|EEF02727.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 158/209 (75%), Positives = 176/209 (84%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGPGADIDTLCVGP + REEDFF LH L E EVTEL PVPDAHV
Sbjct: 79 VIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFITLHDKLAETEEVTELQPVPDAHV 138
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L DEQTVRSLNGCRV DQIL+LV
Sbjct: 139 PVMKFKFQGISIDLLYASISLLVVPEDLDISNGSVLYEVDEQTVRSLNGCRVADQILKLV 198
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P +++FRTTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR+CQLYPNA+PSMLVSRFFR
Sbjct: 199 PNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFR 258
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPR 216
VYTQWRWPNPV+LC+IEE LG VWDPR
Sbjct: 259 VYTQWRWPNPVMLCSIEEDDLGFPVWDPR 287
>gi|310750335|ref|NP_001185530.1| poly(A) polymerase alpha [Gallus gallus]
Length = 737
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 190/414 (45%), Positives = 259/414 (62%), Gaps = 24/414 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF ++ L + EV +L V +A VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEKLKQQEEVKDLRAVEEAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 215 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 275 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 335 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 393 VESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEE-YRTMWVIGLVFKK-TENSEN 450
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F +QA++ M+ + M+I+ HV R+ LPN V
Sbjct: 451 LSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAARHVKRKQLHQLLPNHVL 501
>gi|332864603|ref|XP_003318331.1| PREDICTED: poly(A) polymerase beta [Pan troglodytes]
gi|397498031|ref|XP_003819800.1| PREDICTED: poly(A) polymerase beta [Pan paniscus]
Length = 637
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 209/521 (40%), Positives = 300/521 (57%), Gaps = 60/521 (11%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV P H R DFF + L EV +L V +A VP
Sbjct: 98 IFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKLKLQEEVKDLRAVEEAFVP 156
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 157 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 216
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNAV S LV +FF V
Sbjct: 217 NIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLV 276
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 277 FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSISTRM 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + ++A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 337 VMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLASASTEKQHLEWVGL 394
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF---MGLQRKQGVPV 360
VES++R L +E++ + L Q P P + D + +C+ + +GL++ + +
Sbjct: 395 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEE--FCTMWVIGLGLKKPENSEI 452
Query: 361 GEGE-QFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 416
+ +DI+ T ++QAV+ M+ + GM+I+ H+ R+ L
Sbjct: 453 LSIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAMHLRRKEL--------------- 494
Query: 417 KGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM--PSSSGEFREG 474
+ L V K + +GR+ TD N + +A C +M PSS+ + G
Sbjct: 495 ------HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDLSAGCENSMSVPSSTSTMKTG 546
Query: 475 ----------SPIMSTISSSSINLQ-----FEHMDANELAG 500
SP ++ +++S N+Q + ++ NE +G
Sbjct: 547 PLISSSQGRNSPALAVVTASVANIQATEISLQQVNTNESSG 587
>gi|409079597|gb|EKM79958.1| hypothetical protein AGABI1DRAFT_113202 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 615
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 195/496 (39%), Positives = 284/496 (57%), Gaps = 46/496 (9%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCV P+H TR+ DFF +L E+ VTE+ VP+A+VP
Sbjct: 87 IFTFGSYRLGVHGPGSDIDTLCVVPKHVTRD-DFFEYFEPLLRELDGVTEVAGVPEAYVP 145
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K K SG+ +DLL AR++L IP+DL + D++L+N DE+ +RSL G RVTD +LRLVP
Sbjct: 146 VVKTKISGIPLDLLMARMTLSAIPDDLTLDDDNLLRNMDERCIRSLGGSRVTDAMLRLVP 205
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+Q FR +LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQLYPNA +VSRFF +
Sbjct: 206 DVQVFRDSLRCIKLWARRRAIYSNVNGFLGGVAWAMLVARICQLYPNATAGAIVSRFFII 265
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QW WP PVLL IE+G L ++VW+P+ P D+ H MPIITPAYP M +++NV+ ST
Sbjct: 266 MYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSHRMPIITPAYPAMCATHNVTESTQM 325
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +EF++G +I + + A W LF FF Y+ YL++ S N+D W G
Sbjct: 326 IMTEEFKKGADIVDKVIVGSA--SWSDLFAKHDFFHKYRYYLQVIASTGNSDLQIKWAGT 383
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF------------------------------- 337
VESR+RQL +K+E + ++ HP F
Sbjct: 384 VESRIRQLIMKLE-YVESLTLAHPFIKGFDQVAYCLNEEEVRAIAQGETSPAIAARKKED 442
Query: 338 ---SDKSKPLY-CSYFMGLQRKQGVPVGEG-EQFDIRLTVKEFKQAVSMY-TLRKPGMQI 391
+ + P+Y ++++GL + P G + DI EF + V ++ + M +
Sbjct: 443 VEGKEGAGPVYSTTFYIGLMIEPKQPGSSGPRRLDISYPTIEFTKQVKLWEKYDESTMGL 502
Query: 392 SVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNV 451
V H+ +LP++VF G RP + ++ +R + +T P + R+R
Sbjct: 503 IVRHIRSSSLPDYVFDPGERPPKVTQ-----KRTKGPGKTHNTSPDMPNKRQRSSQSVTT 557
Query: 452 DTHLRNAKCHATMPSS 467
D L+ A+ P++
Sbjct: 558 DLSLKQAENGHAAPAN 573
>gi|449504503|ref|XP_002200600.2| PREDICTED: poly(A) polymerase alpha [Taeniopygia guttata]
Length = 850
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 190/414 (45%), Positives = 259/414 (62%), Gaps = 24/414 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF ++ L + EV +L V +A VP
Sbjct: 207 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEKLKQQEEVKDLRAVEEAFVP 265
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 266 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 325
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 326 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 385
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 386 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 445
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 446 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 503
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 504 VESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEE-YRTMWVIGLVFKK-TENSEN 561
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F +QA++ M+ + M+I+ HV R+ LPN V
Sbjct: 562 LSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAARHVKRKQLHQLLPNHVL 612
>gi|148233493|ref|NP_001083620.1| poly(A) polymerase alpha-B [Xenopus laevis]
gi|38303906|gb|AAH61931.1| Pap protein [Xenopus laevis]
Length = 731
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 186/415 (44%), Positives = 258/415 (62%), Gaps = 15/415 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF ++ L + EV +L V +A VP
Sbjct: 94 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFSSFYEKLKQQEEVKDLRSVEEAFVP 152
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 153 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 212
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I +FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 213 NIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 272
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 273 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRA 332
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + +A +W LF+ FF+ YK+Y+ + SA W G
Sbjct: 333 VMVEEFKQGLAITDEILLLKA--EWSKLFDAPNFFQKYKHYILLLASAPTEKQRLEWVGL 390
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + S+K + + +GL K+ + E
Sbjct: 391 VESKIRILVGSLEKNEFITLAHVNPQSFPAPSENSEKEE-FRTMWVIGLVFKK-MENSEN 448
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNLPNFVFPGGVRPSR 414
D+ ++ F V + + M+I+ HV R+ L + + P V P +
Sbjct: 449 LSVDLTYDIQSFTDTVYRQAINSKMFETEMKIAAMHVKRKQL-HQLLPSHVLPKK 502
>gi|392587022|gb|EIW76357.1| Poly(A) polymerase [Coniophora puteana RWD-64-598 SS2]
Length = 629
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/446 (41%), Positives = 263/446 (58%), Gaps = 41/446 (9%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHG G+DIDTLCV P+H RE DFF +L E+ +E+ VP+A+VP
Sbjct: 85 IFTFGSYRLGVHGAGSDIDTLCVVPKHVLRE-DFFETFEPILREVEGASEVSGVPEAYVP 143
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K K SG+ +D L ARL+L IP+DL + D++L+N DE+ +RSL G RV D+ILRLVP
Sbjct: 144 IIKAKISGIPLDFLMARLALSSIPDDLTLQDDNLLRNLDERCIRSLGGSRVNDEILRLVP 203
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
++ +R +LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQLYPNAV +VSRFF +
Sbjct: 204 NVEVYRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAILVARICQLYPNAVAGAIVSRFFII 263
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QW WP PVLL IEEG L ++VW+P+ P D+ H MPIITPAYP M S++NV+ ST
Sbjct: 264 MYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPGDRSHRMPIITPAYPAMCSTHNVTQSTQM 323
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
I+ +EF++G +I + + A W LF FF Y+ YL++ S +N + W G
Sbjct: 324 IVTEEFKKGADIVDKVIVGSA--TWADLFRKHDFFHKYRYYLQVIASTDNTETQIKWAGT 381
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF--------SDKSKPLYC-------------- 346
VESRLRQL +K+E + +++ HP F D+ + + C
Sbjct: 382 VESRLRQLVMKLE-YVDSLILAHPFIKGFDQVCHCSTEDEIRSVACGEIPEAVRKRKAED 440
Query: 347 -------------SYFMGLQRKQGVPVGEG-EQFDIRLTVKEFKQAVSMY-TLRKPGMQI 391
++++GL+ + G + DI EF + V M+ + M I
Sbjct: 441 IKNVEGAQTVYSTAFYIGLEIEPKPAGATGPRKLDISYPTTEFTKLVKMWEKYNETTMGI 500
Query: 392 SVAHVTRRNLPNFVFPGGVRPSRPSK 417
V H+ +LP++VF G R R ++
Sbjct: 501 YVRHMKSTSLPDYVFDEGERQPRQNR 526
>gi|345325876|ref|XP_001511509.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Ornithorhynchus anatinus]
Length = 740
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 190/414 (45%), Positives = 258/414 (62%), Gaps = 24/414 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF ++ L EV +L V +A VP
Sbjct: 98 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYEKLKLQEEVKDLRAVEEAFVP 156
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 157 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 216
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 217 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 276
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 277 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 337 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 394
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 395 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 452
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F +QA++ M+ + M+I+ HV R+ LPN V
Sbjct: 453 LSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHVKRKQLHQLLPNHVL 503
>gi|28207949|emb|CAD62628.1| unnamed protein product [Homo sapiens]
Length = 752
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 188/411 (45%), Positives = 251/411 (61%), Gaps = 18/411 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 124 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 182
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 183 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 242
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 243 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 302
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 303 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 362
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 363 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 420
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 421 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 478
Query: 364 EQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRN----LPNFVF 406
D+ ++ F V + M+I+ HV R+ LPN V
Sbjct: 479 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVL 529
>gi|354482269|ref|XP_003503321.1| PREDICTED: poly(A) polymerase alpha [Cricetulus griseus]
Length = 742
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 188/405 (46%), Positives = 254/405 (62%), Gaps = 20/405 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 100 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 158
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 159 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 218
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 219 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 278
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 279 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 338
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 339 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 396
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 397 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 454
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 401
D+ ++ F +QA++ M+ L M+I+ HV R+ L
Sbjct: 455 LSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQL 496
>gi|62822283|gb|AAY14832.1| unknown [Homo sapiens]
Length = 465
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 173/368 (47%), Positives = 237/368 (64%), Gaps = 12/368 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR---VENA 448
Query: 364 EQFDIRLT 371
E +I LT
Sbjct: 449 ESVNIDLT 456
>gi|426192448|gb|EKV42384.1| hypothetical protein AGABI2DRAFT_195729 [Agaricus bisporus var.
bisporus H97]
Length = 615
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 195/496 (39%), Positives = 284/496 (57%), Gaps = 46/496 (9%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCV P+H TR+ DFF +L E+ VTE+ VP+A+VP
Sbjct: 87 IFTFGSYRLGVHGPGSDIDTLCVVPKHVTRD-DFFEYFEPLLRELDGVTEVAGVPEAYVP 145
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K K SG+ +DLL AR++L IP+DL + D++L+N DE+ +RSL G RVTD +LRLVP
Sbjct: 146 VVKTKISGIPLDLLMARMTLSAIPDDLTLDDDNLLRNMDERCIRSLGGSRVTDAMLRLVP 205
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+Q FR +LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQLYPNA +VSRFF +
Sbjct: 206 DVQVFRDSLRCIKLWARRRAIYSNVNGFLGGVAWAMLVARICQLYPNATAGAIVSRFFII 265
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QW WP PVLL IE+G L ++VW+P+ P D+ H MPIITPAYP M +++NV+ ST
Sbjct: 266 MYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSHRMPIITPAYPAMCATHNVTESTQM 325
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
IM +EF++G +I + + A W LF FF Y+ YL++ S N+D W G
Sbjct: 326 IMTEEFKKGADIVDKVIVGSA--SWSDLFAKHDFFHKYRYYLQVIASTGNSDLQIKWAGT 383
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF------------------------------- 337
VESR+RQL +K+E + ++ HP F
Sbjct: 384 VESRIRQLIMKLE-YVESLTLAHPFIKGFDQVAYCLNEEEVRAIAQGETSPAIAARKKED 442
Query: 338 ---SDKSKPLY-CSYFMGLQRKQGVPVGEG-EQFDIRLTVKEFKQAVSMY-TLRKPGMQI 391
+ + P+Y ++++GL + P G + DI EF + V ++ + M +
Sbjct: 443 VEGKEGAGPVYSTTFYIGLMIEPKQPGSSGPRRLDISYPTIEFTKQVKLWEKYDESTMGL 502
Query: 392 SVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNV 451
V H+ +LP++VF G RP + ++ +R + +T P + R+R
Sbjct: 503 IVRHIRSSSLPDYVFDPGERPPKVTQ-----KRTKGPGKTHNTSPDMPNKRQRSSQSVTT 557
Query: 452 DTHLRNAKCHATMPSS 467
D L+ A+ P++
Sbjct: 558 DLSLKQAENGHAAPAN 573
>gi|388454164|ref|NP_001252826.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809034|gb|AFE76392.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809036|gb|AFE76393.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411427|gb|AFH28927.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411429|gb|AFH28928.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944936|gb|AFI36073.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944940|gb|AFI36075.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 745
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 188/411 (45%), Positives = 252/411 (61%), Gaps = 18/411 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F V + + M+I+ HV R+ LPN V
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVL 502
>gi|21914853|ref|NP_035242.1| poly(A) polymerase alpha [Mus musculus]
gi|25090856|sp|Q61183.4|PAPOA_MOUSE RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase
gi|21623967|dbj|BAC00996.1| polyA polymerase [Mus musculus]
gi|162318632|gb|AAI56655.1| Poly (A) polymerase alpha [synthetic construct]
Length = 739
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 187/405 (46%), Positives = 254/405 (62%), Gaps = 20/405 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + D+ + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 401
D+ ++ F +QA++ M+ L M+I+ HV R+ L
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQL 493
>gi|355693555|gb|EHH28158.1| hypothetical protein EGK_18525, partial [Macaca mulatta]
gi|355778841|gb|EHH63877.1| hypothetical protein EGM_16936, partial [Macaca fascicularis]
Length = 745
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 188/411 (45%), Positives = 252/411 (61%), Gaps = 18/411 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F V + + M+I+ HV R+ LPN V
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVL 502
>gi|32490557|ref|NP_116021.2| poly(A) polymerase alpha isoform 1 [Homo sapiens]
gi|332843097|ref|XP_003314562.1| PREDICTED: poly(A) polymerase alpha [Pan troglodytes]
gi|426377955|ref|XP_004055715.1| PREDICTED: poly(A) polymerase alpha [Gorilla gorilla gorilla]
gi|59803092|sp|P51003.4|PAPOA_HUMAN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|23271194|gb|AAH36014.1| Poly(A) polymerase alpha [Homo sapiens]
gi|119602048|gb|EAW81642.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|119602050|gb|EAW81644.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|306921445|dbj|BAJ17802.1| poly(A) polymerase alpha [synthetic construct]
gi|410307962|gb|JAA32581.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351881|gb|JAA42544.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351883|gb|JAA42545.1| poly(A) polymerase alpha [Pan troglodytes]
Length = 745
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 188/411 (45%), Positives = 252/411 (61%), Gaps = 18/411 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F V + + M+I+ HV R+ LPN V
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVL 502
>gi|238013826|gb|ACR37948.1| unknown [Zea mays]
Length = 428
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 161/287 (56%), Positives = 214/287 (74%), Gaps = 5/287 (1%)
Query: 180 MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSS 239
MLVSRFFRV+TQW+WPNPV+LC+IEE LG VWDPR+NP+D+ H MPIITPAYPCMNSS
Sbjct: 1 MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 60
Query: 240 YNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA 299
YNVSTSTLR+M+++FQ G+ IC+ +E N+ W LFEPF FFEAYKNYL++DI AE+
Sbjct: 61 YNVSTSTLRVMLEQFQFGNRICQEIEMNK--TSWPALFEPFQFFEAYKNYLQVDIIAEDD 118
Query: 300 DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGV 358
+DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C++FMGL RK+GV
Sbjct: 119 EDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGV 178
Query: 359 PVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKG 418
+ EG+QFDIR TV EF+ ++MY KPGM+++V+HV R+ +P +VFP G + RPS+
Sbjct: 179 KIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSRH 238
Query: 419 TWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMP 465
+ ++ + T + D + +++ D +R AK +T P
Sbjct: 239 V--NHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSP 283
>gi|148686800|gb|EDL18747.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
gi|148686803|gb|EDL18750.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
Length = 736
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 187/405 (46%), Positives = 254/405 (62%), Gaps = 20/405 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 94 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 152
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 153 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 212
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 213 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 272
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 273 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 332
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 333 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 390
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + D+ + + +GL K+ E
Sbjct: 391 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTMWVIGLVFKK-TENSEN 448
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 401
D+ ++ F +QA++ M+ L M+I+ HV R+ L
Sbjct: 449 LSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQL 490
>gi|74210049|dbj|BAE21312.1| unnamed protein product [Mus musculus]
Length = 739
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 187/405 (46%), Positives = 254/405 (62%), Gaps = 20/405 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + D+ + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTMWVIGLVLKK-TENSEN 451
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 401
D+ ++ F +QA++ M+ L M+I+ HV R+ L
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQL 493
>gi|194379500|dbj|BAG63716.1| unnamed protein product [Homo sapiens]
Length = 761
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 188/411 (45%), Positives = 252/411 (61%), Gaps = 18/411 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 113 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 171
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 172 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 231
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 232 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 291
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 292 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 351
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 352 VMVEEFKQGPAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 409
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 410 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 467
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F V + + M+I+ HV R+ LPN V
Sbjct: 468 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVL 518
>gi|380809032|gb|AFE76391.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383415357|gb|AFH30892.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944938|gb|AFI36074.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 724
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 190/414 (45%), Positives = 257/414 (62%), Gaps = 24/414 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F +QA++ M+ + M+I+ HV R+ LPN V
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQLHQLLPNHVL 502
>gi|390469486|ref|XP_002754311.2| PREDICTED: poly(A) polymerase alpha isoform 1 [Callithrix jacchus]
Length = 745
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 190/414 (45%), Positives = 257/414 (62%), Gaps = 24/414 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F +QA++ M+ + M+I+ HV R+ LPN V
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQLHQLLPNHVL 502
>gi|395827780|ref|XP_003787073.1| PREDICTED: poly(A) polymerase alpha [Otolemur garnettii]
Length = 740
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 188/411 (45%), Positives = 252/411 (61%), Gaps = 18/411 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F V + + M+I+ HV R+ LPN V
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVL 502
>gi|194379056|dbj|BAG58079.1| unnamed protein product [Homo sapiens]
Length = 740
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 190/414 (45%), Positives = 257/414 (62%), Gaps = 24/414 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 113 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 171
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 172 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 231
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 232 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 291
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 292 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 351
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 352 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 409
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 410 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 467
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F +QA++ M+ + M+I+ HV R+ LPN V
Sbjct: 468 LSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQLHQLLPNHVL 518
>gi|157820829|ref|NP_001101526.1| poly(A) polymerase alpha [Rattus norvegicus]
gi|149044213|gb|EDL97595.1| poly (A) polymerase alpha (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 739
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 187/405 (46%), Positives = 254/405 (62%), Gaps = 20/405 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + D+ + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 401
D+ ++ F +QA++ M+ L M+I+ HV R+ L
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQL 493
>gi|410962897|ref|XP_003988005.1| PREDICTED: poly(A) polymerase alpha [Felis catus]
Length = 739
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 190/414 (45%), Positives = 257/414 (62%), Gaps = 24/414 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F +QA++ M+ + M+I+ HV R+ LPN V
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQLHQLLPNHVL 502
>gi|119602055|gb|EAW81649.1| poly(A) polymerase alpha, isoform CRA_f [Homo sapiens]
Length = 744
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 190/414 (45%), Positives = 257/414 (62%), Gaps = 24/414 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F +QA++ M+ + M+I+ HV R+ LPN V
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQLHQLLPNHVL 502
>gi|301783837|ref|XP_002927334.1| PREDICTED: poly(A) polymerase alpha-like [Ailuropoda melanoleuca]
Length = 739
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 190/414 (45%), Positives = 257/414 (62%), Gaps = 24/414 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F +QA++ M+ + M+I+ HV R+ LPN V
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQLHQLLPNHVL 502
>gi|281345200|gb|EFB20784.1| hypothetical protein PANDA_017098 [Ailuropoda melanoleuca]
Length = 736
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 190/414 (45%), Positives = 257/414 (62%), Gaps = 24/414 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 94 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 152
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 153 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 212
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 213 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 272
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 273 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 332
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 333 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 390
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 391 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 448
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F +QA++ M+ + M+I+ HV R+ LPN V
Sbjct: 449 LSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQLHQLLPNHVL 499
>gi|194038370|ref|XP_001929110.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Sus scrofa]
Length = 739
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 188/411 (45%), Positives = 252/411 (61%), Gaps = 18/411 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F V + + M+I+ HV R+ LPN V
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVL 502
>gi|397526096|ref|XP_003832975.1| PREDICTED: poly(A) polymerase alpha, partial [Pan paniscus]
Length = 804
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 190/414 (45%), Positives = 257/414 (62%), Gaps = 24/414 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 156 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 214
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 215 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 274
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 275 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 334
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 335 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 394
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 395 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 452
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 453 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 510
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F +QA++ M+ + M+I+ HV R+ LPN V
Sbjct: 511 LSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQLHQLLPNHVL 561
>gi|302564155|ref|NP_001181787.1| poly(A) polymerase beta [Macaca mulatta]
Length = 637
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 209/518 (40%), Positives = 291/518 (56%), Gaps = 54/518 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 98 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYVKLKLQEEVKDLRAVEEAFVP 156
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 157 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 216
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNAV S LV +FF V
Sbjct: 217 NIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLV 276
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 277 FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + ++A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 337 VMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGL 394
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L H +P F + K P + +GL K+ E
Sbjct: 395 VESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWVIGLVLKKP-ENSEI 452
Query: 364 EQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 419
D+ ++ F V + GM+I+ H+ R+ L
Sbjct: 453 LSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKEL------------------ 494
Query: 420 WDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM--PSSSGEFREG--- 474
+ L +V K A +GR+ TD N + +A C +M PSS+ + G
Sbjct: 495 ---HQLLPHRVLQDKKAHATEGRRL--TDLNDSSFDLSAGCENSMSVPSSTSTMKTGPLI 549
Query: 475 -------SPIMSTISSSSINLQ-----FEHMDANELAG 500
SP ++ +++S N+Q + M+ +E +G
Sbjct: 550 SSSQGRNSPALAVMTASMANVQATEISLQQMNTSESSG 587
>gi|440899282|gb|ELR50609.1| Poly(A) polymerase alpha, partial [Bos grunniens mutus]
Length = 736
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 185/402 (46%), Positives = 249/402 (61%), Gaps = 14/402 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 94 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 152
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 153 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 212
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 213 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 272
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 273 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 332
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 333 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 390
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 391 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 448
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNL 401
D+ ++ F V + + M+I+ HV R+ L
Sbjct: 449 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 490
>gi|345804115|ref|XP_537551.3| PREDICTED: poly(A) polymerase alpha [Canis lupus familiaris]
Length = 832
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 188/411 (45%), Positives = 251/411 (61%), Gaps = 18/411 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 190 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 248
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 249 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 308
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 309 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 368
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 369 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 428
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 429 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 486
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 487 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 544
Query: 364 EQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRN----LPNFVF 406
D+ ++ F V + M+I+ HV R+ LPN V
Sbjct: 545 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVL 595
>gi|149737664|ref|XP_001489128.1| PREDICTED: poly(A) polymerase alpha-like [Equus caballus]
Length = 755
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 188/411 (45%), Positives = 252/411 (61%), Gaps = 18/411 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 113 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 171
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 172 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 231
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 232 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 291
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 292 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 351
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 352 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 409
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 410 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 467
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F V + + M+I+ HV R+ LPN V
Sbjct: 468 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVL 518
>gi|426248569|ref|XP_004018035.1| PREDICTED: poly(A) polymerase alpha [Ovis aries]
Length = 739
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 187/405 (46%), Positives = 254/405 (62%), Gaps = 20/405 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 401
D+ ++ F +QA++ M+ + M+I+ HV R+ L
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQL 493
>gi|148686802|gb|EDL18749.1| poly (A) polymerase alpha, isoform CRA_c [Mus musculus]
Length = 729
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 191/423 (45%), Positives = 260/423 (61%), Gaps = 21/423 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 94 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 152
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 153 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 212
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 213 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 272
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 273 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 332
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 333 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 390
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + D+ + + +GL K+ E
Sbjct: 391 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTMWVIGLVFKK-TENSEN 448
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 416
D+ ++ F +QA++ M+ L M+I+ HV R+ L + + P V R
Sbjct: 449 LSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQL-HQLLPSHVLQKRKK 504
Query: 417 KGT 419
T
Sbjct: 505 HST 507
>gi|28603760|ref|NP_788820.1| poly(A) polymerase alpha [Bos taurus]
gi|464345|sp|P25500.3|PAPOA_BOVIN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|605|emb|CAA43782.1| polynucleotide adenylyltransferase [Bos taurus]
gi|296475173|tpg|DAA17288.1| TPA: poly(A) polymerase alpha [Bos taurus]
Length = 739
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 185/402 (46%), Positives = 249/402 (61%), Gaps = 14/402 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNL 401
D+ ++ F V + + M+I+ HV R+ L
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 493
>gi|26335223|dbj|BAC31312.1| unnamed protein product [Mus musculus]
gi|74224037|dbj|BAE23879.1| unnamed protein product [Mus musculus]
Length = 429
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 165/329 (50%), Positives = 223/329 (67%), Gaps = 4/329 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 215 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 275 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 335 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 392
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES++R L +ER+ + L H +P F
Sbjct: 393 VESKIRVLVGNLERNEFITL-AHVNPQSF 420
>gi|17536297|ref|NP_496067.1| Protein T15H9.6 [Caenorhabditis elegans]
gi|3879808|emb|CAA87419.1| Protein T15H9.6 [Caenorhabditis elegans]
Length = 554
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/422 (41%), Positives = 253/422 (59%), Gaps = 20/422 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
LI G + VH GADID++ V PRH TR DFF +L + PEVTEL V A VP
Sbjct: 90 LIPFGSYRLGVHSSGADIDSIVVAPRHITRS-DFFNSFKDILAKNPEVTELCAVEKAFVP 148
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+M K+SGV ID+L+ARL+L +PEDL+I DS+L+N DE++VRSLNGCRV +Q+L+LVP
Sbjct: 149 IMTLKYSGVDIDILFARLALKSVPEDLNILDDSLLKNLDEESVRSLNGCRVAEQLLKLVP 208
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+NF TLR ++ WAK G+YSN GF GGI WA+LVARICQLYPNA PS L+ + F +
Sbjct: 209 HQKNFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVARICQLYPNAAPSRLIQKVFFI 268
Query: 189 YTQWRWPNPVLLCAI-----EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
++ W WP PVLL I + L VWDPRRN D+YHLMPIITPA+P NS++NVS
Sbjct: 269 FSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHADRYHLMPIITPAFPQQNSTHNVS 328
Query: 244 TSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR 303
S+++++ DE ++ IC+ + +E ++W L E FF Y +++ + + AE+ +
Sbjct: 329 RSSMKVIQDEMKKALIICDKI--HEGTLEWRDLLEEINFFSKYHHFIALKLKAESVKEEL 386
Query: 304 NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
+ G+ ESR+RQL +E++ + +P F D P +F+GL+ V
Sbjct: 387 AFGGFFESRIRQLVQILEKNQVIQV-AQINPRKFKDVKDPKKSIWFIGLEF-----VANV 440
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISV--AHVTRRNLPNFVFPGGVRPSRPSK 417
+ D+ +++FK + ++ G Q+ + R NL N + + R K
Sbjct: 441 KNVDLTSDIQQFKMNIDRQSMSVKEIAAGCQVETDFTYEKRSNLINIISKKDLSCQRIMK 500
Query: 418 GT 419
T
Sbjct: 501 KT 502
>gi|417412482|gb|JAA52623.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 725
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 187/411 (45%), Positives = 251/411 (61%), Gaps = 18/411 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 110 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 168
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 169 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 228
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 229 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 288
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 289 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 348
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++ +W LFE FF+ YK+Y+ + SA W G
Sbjct: 349 VMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 406
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 407 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-FRTMWVIGLVFKK-TENSEN 464
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F V + + M+I+ HV R+ LPN V
Sbjct: 465 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHELLPNHVL 515
>gi|74354794|gb|AAI02482.1| PAPOLA protein [Bos taurus]
Length = 693
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 187/405 (46%), Positives = 254/405 (62%), Gaps = 20/405 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 401
D+ ++ F +QA++ M+ + M+I+ HV R+ L
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQL 493
>gi|643|emb|CAA45031.1| poly(A) polymerase [Bos taurus]
Length = 689
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 185/402 (46%), Positives = 249/402 (61%), Gaps = 14/402 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNL 401
D+ ++ F V + + M+I+ HV R+ L
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 493
>gi|402862797|ref|XP_003895729.1| PREDICTED: poly(A) polymerase beta [Papio anubis]
Length = 637
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 209/518 (40%), Positives = 290/518 (55%), Gaps = 54/518 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 98 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYVKLKLQEEVKDLRAVEEAFVP 156
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 157 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 216
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNAV S LV +FF V
Sbjct: 217 NIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLV 276
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 277 FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + ++A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 337 VMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGL 394
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L H +P F + K P + +GL K+ E
Sbjct: 395 VESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWVIGLVLKKP-ENSEI 452
Query: 364 EQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 419
D+ ++ F V + GM+I+ H+ R+ L
Sbjct: 453 LSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKEL------------------ 494
Query: 420 WDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM--PSSSGEFREG--- 474
+ L V K A +GR+ TD N + +A C +M PSS+ + G
Sbjct: 495 ---HQLLPHHVLQDKKAHATEGRRL--TDLNDSSFDLSAGCENSMSVPSSTSTMKTGPLI 549
Query: 475 -------SPIMSTISSSSINLQ-----FEHMDANELAG 500
SP ++ +++S N+Q + M+ +E +G
Sbjct: 550 SSSQGRNSPALAVMTASMANVQATEISLQQMNTSESSG 587
>gi|228152|prf||1717389A poly(A) polymerase
Length = 689
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 185/402 (46%), Positives = 249/402 (61%), Gaps = 14/402 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNL 401
D+ ++ F V + + M+I+ HV R+ L
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 493
>gi|431839265|gb|ELK01192.1| Poly(A) polymerase alpha, partial [Pteropus alecto]
Length = 746
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 187/411 (45%), Positives = 251/411 (61%), Gaps = 18/411 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 104 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 162
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 163 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 222
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 223 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 282
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 283 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 342
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++ +W LFE FF+ YK+Y+ + SA W G
Sbjct: 343 VMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 400
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 401 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 458
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F V + + M+I+ HV R+ LPN V
Sbjct: 459 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHELLPNHVL 509
>gi|417412515|gb|JAA52639.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 738
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 187/411 (45%), Positives = 251/411 (61%), Gaps = 18/411 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 110 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 168
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 169 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 228
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 229 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 288
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 289 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 348
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++ +W LFE FF+ YK+Y+ + SA W G
Sbjct: 349 VMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 406
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 407 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-FRTMWVIGLVFKK-TENSEN 464
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F V + + M+I+ HV R+ LPN V
Sbjct: 465 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHELLPNHVL 515
>gi|432104377|gb|ELK31030.1| Poly(A) polymerase alpha [Myotis davidii]
Length = 844
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 187/411 (45%), Positives = 251/411 (61%), Gaps = 18/411 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 195 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 253
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 254 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 313
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 314 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 373
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 374 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 433
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++ +W LFE FF+ YK+Y+ + SA W G
Sbjct: 434 VMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 491
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 492 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 549
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F V + + M+I+ HV R+ LPN V
Sbjct: 550 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHELLPNHVL 600
>gi|67972178|dbj|BAE02431.1| unnamed protein product [Macaca fascicularis]
Length = 637
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 207/518 (39%), Positives = 292/518 (56%), Gaps = 54/518 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 98 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYVKLKLQEEVKDLRAVEEAFVP 156
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 157 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 216
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNAV S LV +FF V
Sbjct: 217 NIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLV 276
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 277 FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + ++A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 337 VMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGL 394
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L H +P F + K P + +GL K+ E
Sbjct: 395 VESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWVIGLVLKKP-ENSEI 452
Query: 364 EQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 419
D+ ++ F V + GM+I+ H+ R+ L + + P V + ++ T
Sbjct: 453 LSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKEL-HQLLPHHVLQDKKAQAT 511
Query: 420 WDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM--PSSSGEFREG--- 474
R+ TD N ++ +A C +M PSS+ + G
Sbjct: 512 ----------------------ESRRLTDLNDNSFDLSAGCENSMSVPSSTSTMKTGPLI 549
Query: 475 -------SPIMSTISSSSINLQ-----FEHMDANELAG 500
SP ++ +++S N+Q + M+ +E +G
Sbjct: 550 SSSQGRNSPALAVMTASMANVQATEISLQQMNTSESSG 587
>gi|297679796|ref|XP_002817705.1| PREDICTED: poly(A) polymerase beta [Pongo abelii]
Length = 637
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 288/522 (55%), Gaps = 49/522 (9%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV P H R DFF + L EV +L V +A VP
Sbjct: 98 IFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKLKLQEEVKDLRAVEEAFVP 156
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 157 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 216
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNAV S LV +FF V
Sbjct: 217 NIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLV 276
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 277 FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSISTRM 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + ++A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 337 VMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIILLASASTEKQHLEWVGL 394
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 395 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLGLKKP-ENSEI 452
Query: 364 EQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 419
D+ ++ F V + GM+I+ H+ R+ L
Sbjct: 453 LSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKEL------------------ 494
Query: 420 WDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM--PSSSGEFREG--- 474
+ L V K + +GR+ TD N + +A C +M PSS+ + G
Sbjct: 495 ---HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFGLSAGCENSMSVPSSTSTMKTGPLI 549
Query: 475 -------SPIMSTISSSSINLQFEHMDANELAGSNREKVENN 509
SP ++ +++S N+Q + ++ S V N
Sbjct: 550 SSSQGRNSPALAIMTASVANIQATEISLQQVNTSESSGVALN 591
>gi|241643377|ref|XP_002411054.1| poly(A) polymerase, putative [Ixodes scapularis]
gi|215503685|gb|EEC13179.1| poly(A) polymerase, putative [Ixodes scapularis]
Length = 492
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 180/391 (46%), Positives = 241/391 (61%), Gaps = 9/391 (2%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADIDTLCV PRH R DFF ++L + EV +L V +A VPV+K
Sbjct: 107 FGSYRLGVHTKGADIDTLCVAPRHVDRT-DFFSSFVELLRQQEEVKDLRAVEEAFVPVIK 165
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F+G+ +D+L+ARL+L IPE D+ +IL+N D + VRSLNGCRVTD+IL LVP +
Sbjct: 166 MTFAGIELDMLFARLALKDIPEQQDLRDVNILKNLDPKCVRSLNGCRVTDEILHLVPNRE 225
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
FR +LR ++ WAK+ GVYSNV G+LGG++WA+LVAR CQLYPNA + LV +FF V++Q
Sbjct: 226 TFRLSLRAIKLWAKKHGVYSNVLGYLGGVSWAMLVARTCQLYPNAAAATLVHKFFLVFSQ 285
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W WP PVLL EE LG VWDPR N D++HLMPIITPAYP NS++NVS ST IM
Sbjct: 286 WPWPKPVLLKQPEENKLGFPVWDPRINVADRFHLMPIITPAYPQQNSTFNVSVSTRTIMR 345
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
EF++G I + E +W LFEP FF YK+++ + + + W G VES
Sbjct: 346 QEFKQGLAITD--EIMLGRTEWIKLFEPPNFFGKYKHFIVLMATTMTKEHHLEWYGLVES 403
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDF----SDKSKPLYCSYFMGLQRKQGVPVGEGEQFD 367
++R L +ERH Y + H +P F D K L +F+GLQ + V +D
Sbjct: 404 KIRILISNLERHPYIEI-AHVNPESFPPCEPDGDK-LQSMWFIGLQFSKTEHVNVDLTYD 461
Query: 368 IRLTVKEFKQAVSMYTLRKPGMQISVAHVTR 398
IR V K+ + + K M++ + +V R
Sbjct: 462 IRSFVDTVKRQATAINILKQDMEVDIKYVRR 492
>gi|403287191|ref|XP_003934837.1| PREDICTED: poly(A) polymerase beta [Saimiri boliviensis
boliviensis]
Length = 634
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 201/517 (38%), Positives = 289/517 (55%), Gaps = 50/517 (9%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LC+ PRH R DFF + L EV +L V +A VP
Sbjct: 95 IFTFGSYRLGVHTKGADIDALCIAPRHVDRS-DFFTSFYAKLKLQEEVKDLRAVEEAFVP 153
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 154 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 213
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNAV S LV +FF V
Sbjct: 214 NIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLV 273
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 274 FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 333
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + ++A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 334 VMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGL 391
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 392 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVLKKP-ENSEI 449
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 419
D+ ++ F V + + GM+I+ H+ R+ L
Sbjct: 450 LSIDLTYDIQSFTDTVYRQAMNSKMFETGMKIAAMHLRRKEL------------------ 491
Query: 420 WDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREG----- 474
+ L V K + +GR+ +D+ + ++PSS+ + G
Sbjct: 492 ---HQLLPHHVLQEKKAHSTEGRRLTDLNDSSFDLSAGGENSISVPSSTSTMKTGPLTSS 548
Query: 475 -----SPIMSTISSSSINLQ-----FEHMDANELAGS 501
SP ++ +++S N+Q + ++ +E +G+
Sbjct: 549 SQGRNSPSLAVMTASVANIQATEISLQQVNTSESSGT 585
>gi|195431638|ref|XP_002063835.1| GK15696 [Drosophila willistoni]
gi|194159920|gb|EDW74821.1| GK15696 [Drosophila willistoni]
Length = 872
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 180/432 (41%), Positives = 253/432 (58%), Gaps = 50/432 (11%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PR+ R D+F ++L + PEVTE V +A VPV+K
Sbjct: 120 FGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVPVIK 178
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ IDLL+ARLSL IP+D D+ D++L+N D ++VRSLNGCRVTD+IL LVP I+
Sbjct: 179 MNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLKNLDPRSVRSLNGCRVTDEILALVPNIE 238
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR CQLYPNA + LV +FF V+++
Sbjct: 239 NFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSR 298
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WPNPVLL + +L VWDPR N D+YHLMPIITPAYP NS++NVS ST ++++
Sbjct: 299 WKWPNPVLLKHPDNVNLRFPVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVIL 358
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
EF RG I + E V W+ LFE +FF Y++++ + ++++ ADD W G VES
Sbjct: 359 TEFNRGMNITD--EIMLGRVPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVES 416
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSDK------------------------------- 340
++R L +ER+ + L H +P F K
Sbjct: 417 KVRLLIGNLERNAHIAL-AHVNPKCFEFKKGQSANSSQNNSGNEDDPKQTQQQQTNNQAN 475
Query: 341 -------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY----TLRKPGM 389
S P +F+GL+ ++ + D+ +++ F + V M+ + K GM
Sbjct: 476 AAASTVTSSPFCSMWFIGLEFER----SDNLNIDLTESIQNFTEHVIMHGVNIKMLKEGM 531
Query: 390 QISVAHVTRRNL 401
I HV R+ L
Sbjct: 532 TIDARHVKRKQL 543
>gi|123980646|gb|ABM82152.1| poly(A) polymerase beta (testis specific) [synthetic construct]
gi|123995471|gb|ABM85337.1| poly(A) polymerase beta (testis specific) [synthetic construct]
Length = 636
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 210/520 (40%), Positives = 296/520 (56%), Gaps = 58/520 (11%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV P H R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKLKLQEEVKDLRAVQEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNAV S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSISTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + ++A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 336 VMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLASASTEKQHLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQ---GVPV 360
VES++R L +E++ + L H +P F + K P + +GL K+ +
Sbjct: 394 VESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWVIGLGLKKPDNSEIL 452
Query: 361 GEGEQFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 417
+DI+ T ++QAV+ M+ + GM+I+ H+ R+ L
Sbjct: 453 SIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAVHLRRKEL---------------- 493
Query: 418 GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM--PSSSGEFREG- 474
+ L V K + +GR+ TD N + +A C +M PSS+ + G
Sbjct: 494 -----HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDLSAGCENSMSVPSSTSTMKTGP 546
Query: 475 ---------SPIMSTISSSSINLQ-----FEHMDANELAG 500
SP ++ +++S N+Q + ++ NE +G
Sbjct: 547 LISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESSG 586
>gi|1709571|sp|P51004.1|PAPO1_XENLA RecName: Full=Poly(A) polymerase alpha-A; Short=PAP-alpha-A;
AltName: Full=Polynucleotide adenylyltransferase alpha-A
gi|643644|gb|AAC59745.1| poly(A) polymerase type 1, partial [Xenopus laevis]
Length = 715
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 186/415 (44%), Positives = 256/415 (61%), Gaps = 15/415 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + EV +L V +A VP
Sbjct: 79 IFTFGPYRLGVHTKGADIDALCVAPRHVDRS-DFFSSFYDKLKQQEEVKDLRSVEEAFVP 137
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 138 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 197
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I +FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 198 NIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 257
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 258 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRA 317
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + +A +W LF+ FF+ YK+Y+ + SA W G
Sbjct: 318 VMIEEFKQGLAITDEILLGKA--EWSKLFDAPNFFQKYKHYILLLASAPTEKQRLEWVGL 375
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYF-----MGLQRKQGVPVGEG 363
VES++R L +E++ + L H +P F S+ + F +GL K+ + E
Sbjct: 376 VESKIRILVGSLEKNEFITL-AHVNPRSFPAPSENMEKEEFRTMWVIGLVFKK-MENSEN 433
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNLPNFVFPGGVRPSR 414
D+ ++ F V + + M+I+ HV R+ L + + P V P +
Sbjct: 434 LSVDLTYDIQSFTDTVDRQAINSKMFETEMKIAAMHVKRKQL-HQLQPSHVSPKK 487
>gi|34193801|gb|AAH36653.2| Poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 210/520 (40%), Positives = 296/520 (56%), Gaps = 58/520 (11%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV P H R DFF + L EV +L V +A VP
Sbjct: 98 IFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKLKLQEEVKDLRAVQEAFVP 156
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 157 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 216
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNAV S LV +FF V
Sbjct: 217 NIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLV 276
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 277 FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSISTRM 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + ++A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 337 VMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLASASTEKQHLEWVGL 394
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQ---GVPV 360
VES++R L +E++ + L H +P F + K P + +GL K+ +
Sbjct: 395 VESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWVIGLGLKKPDNSEIL 453
Query: 361 GEGEQFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 417
+DI+ T ++QAV+ M+ + GM+I+ H+ R+ L
Sbjct: 454 SIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAVHLRRKEL---------------- 494
Query: 418 GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM--PSSSGEFREG- 474
+ L V K + +GR+ TD N + +A C +M PSS+ + G
Sbjct: 495 -----HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDLSAGCENSMSVPSSTSTMKTGP 547
Query: 475 ---------SPIMSTISSSSINLQ-----FEHMDANELAG 500
SP ++ +++S N+Q + ++ NE +G
Sbjct: 548 LISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESSG 587
>gi|77874206|ref|NP_064529.4| poly(A) polymerase beta [Homo sapiens]
gi|51094718|gb|EAL23967.1| poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 210/520 (40%), Positives = 296/520 (56%), Gaps = 58/520 (11%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV P H R DFF + L EV +L V +A VP
Sbjct: 98 IFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKLKLQEEVKDLRAVEEAFVP 156
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 157 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 216
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNAV S LV +FF V
Sbjct: 217 NIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLV 276
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 277 FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSISTRM 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + ++A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 337 VMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLASASTEKQHLEWVGL 394
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQ---GVPV 360
VES++R L +E++ + L H +P F + K P + +GL K+ +
Sbjct: 395 VESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWVIGLGLKKPDNSEIL 453
Query: 361 GEGEQFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 417
+DI+ T ++QAV+ M+ + GM+I+ H+ R+ L
Sbjct: 454 SIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAMHLRRKEL---------------- 494
Query: 418 GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM--PSSSGEFREG- 474
+ L V K + +GR+ TD N + +A C +M PSS+ + G
Sbjct: 495 -----HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDLSAGCENSMSVPSSTSTMKTGP 547
Query: 475 ---------SPIMSTISSSSINLQ-----FEHMDANELAG 500
SP ++ +++S N+Q + ++ NE +G
Sbjct: 548 LISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESSG 587
>gi|18203318|sp|Q9NRJ5.1|PAPOB_HUMAN RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
gi|8895537|gb|AAF81013.1|AF218840_1 testis-specific poly(A) polymerase [Homo sapiens]
gi|41474575|gb|AAS07561.1| unknown [Homo sapiens]
Length = 636
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 210/520 (40%), Positives = 296/520 (56%), Gaps = 58/520 (11%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV P H R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNAV S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSISTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + ++A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 336 VMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLASASTEKQHLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQ---GVPV 360
VES++R L +E++ + L H +P F + K P + +GL K+ +
Sbjct: 394 VESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWVIGLGLKKPDNSEIL 452
Query: 361 GEGEQFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 417
+DI+ T ++QAV+ M+ + GM+I+ H+ R+ L
Sbjct: 453 SIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAMHLRRKEL---------------- 493
Query: 418 GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM--PSSSGEFREG- 474
+ L V K + +GR+ TD N + +A C +M PSS+ + G
Sbjct: 494 -----HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDLSAGCENSMSVPSSTSTMKTGP 546
Query: 475 ---------SPIMSTISSSSINLQ-----FEHMDANELAG 500
SP ++ +++S N+Q + ++ NE +G
Sbjct: 547 LISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESSG 586
>gi|417412403|gb|JAA52590.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 709
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 187/411 (45%), Positives = 251/411 (61%), Gaps = 18/411 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 110 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 168
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 169 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 228
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 229 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 288
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 289 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 348
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++ +W LFE FF+ YK+Y+ + SA W G
Sbjct: 349 VMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 406
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 407 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-FRTMWVIGLVFKK-TENSEN 464
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F V + + M+I+ HV R+ LPN V
Sbjct: 465 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHELLPNHVL 515
>gi|417412397|gb|JAA52587.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 707
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 187/411 (45%), Positives = 251/411 (61%), Gaps = 18/411 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 110 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 168
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 169 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 228
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 229 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 288
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 289 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 348
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++ +W LFE FF+ YK+Y+ + SA W G
Sbjct: 349 VMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 406
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 407 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-FRTMWVIGLVFKK-TENSEN 464
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F V + + M+I+ HV R+ LPN V
Sbjct: 465 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHELLPNHVL 515
>gi|55669561|pdb|1Q79|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 514
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 185/402 (46%), Positives = 249/402 (61%), Gaps = 14/402 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLXFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRXIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNL 401
D+ ++ F V + + M+I+ HV R+ L
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 493
>gi|371470953|gb|AEX30810.1| poly(A) polymerase [Bubalus bubalis]
Length = 739
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 185/402 (46%), Positives = 249/402 (61%), Gaps = 14/402 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L H +P F + K P + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITL-AHVNPQSFQAPKENPDKEEFRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNL 401
D+ ++ F V + + M+I+ HV R+ L
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 493
>gi|164661493|ref|XP_001731869.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
gi|159105770|gb|EDP44655.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
Length = 527
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 165/330 (50%), Positives = 225/330 (68%), Gaps = 4/330 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCV P+H RE DFF +L +VTE+ VP+A+VP
Sbjct: 85 IFTFGSYRLGVHGPGSDIDTLCVAPKHVQRE-DFFEIFEALLQARDDVTEVTSVPEAYVP 143
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K KF G+SID L++R++L I + L++ D++L+N DE+ VRSL G RVTD+IL LVP
Sbjct: 144 LIKTKFMGISIDFLFSRIALPRIDDSLELRDDNLLKNLDERDVRSLGGSRVTDEILHLVP 203
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR LRC++ WA RR +YSNV GFLGG+ WA+LVARICQLYPN V +VSRFF +
Sbjct: 204 NVYVFRLALRCIKLWASRRAIYSNVLGFLGGVAWAMLVARICQLYPNEVAGAIVSRFFII 263
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QW+WP PVLL IE+G L ++VW+PR P D+ H MPIITPAYP M +++NV+ ST
Sbjct: 264 LLQWKWPQPVLLKQIEDGPLPIRVWNPRLYPTDRLHRMPIITPAYPSMCATHNVTQSTQM 323
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M +EF+RG E+ + + + + W+ LFE FF YK YL++ S+ +AD W+G
Sbjct: 324 VMTEEFRRGSEVVDRIFRGKT--SWNELFEKNDFFHKYKYYLQVIASSGSADLQLKWQGT 381
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFS 338
VESRLRQL +K+E +L HP F+
Sbjct: 382 VESRLRQLIMKLEL-VPALLCAHPFVKGFN 410
>gi|332257779|ref|XP_003277982.1| PREDICTED: poly(A) polymerase beta [Nomascus leucogenys]
Length = 637
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 208/523 (39%), Positives = 292/523 (55%), Gaps = 51/523 (9%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 98 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYAKLKLQEEVKDLRAVEEAFVP 156
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 157 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 216
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAK +YSN+ FLGG++WA+LVAR CQLYPNAV S LV +FF V
Sbjct: 217 NIDNFRLTLRAIKLWAKCHNIYSNILCFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLV 276
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 277 FSEWEWPNPVLLKEPEQRNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSISTRM 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + +A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 337 VMIEEFKQGLAITHEILLRKA--EWSKLFEAPSFFQKYKHYIVLLASATTEKQHLEWVGL 394
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + +D K + +GL K+ E
Sbjct: 395 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENTDMEK-FRTMWVIGLVLKKP-ENSEI 452
Query: 364 EQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKG 418
D+ ++ F +QAV+ + + GM+I+ H+ R+ L
Sbjct: 453 LSIDLTYDIQSFTDTVYRQAVN-SKMFEVGMKITAMHLRRKEL----------------- 494
Query: 419 TWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM--PSSSGEFREG-- 474
+ L V K + +GR+ TD N + +A C +M PSS+ + G
Sbjct: 495 ----HQLLPHHVLQDKKAHSTEGRRL--TDLNDTSFDLSAGCENSMSVPSSTSAVKTGPL 548
Query: 475 --------SPIMSTISSSSINLQFEHMDANELAGSNREKVENN 509
SP ++ +++S N+Q + ++ S V N
Sbjct: 549 ISSSQGRNSPALAVMTASVANIQATEISLQQVNTSESSGVALN 591
>gi|384487946|gb|EIE80126.1| hypothetical protein RO3G_04831 [Rhizopus delemar RA 99-880]
Length = 598
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 165/335 (49%), Positives = 230/335 (68%), Gaps = 9/335 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VHG GADIDTLCV P+H RE FF ++ ML E PEVTE+ VPDA+VPV+K
Sbjct: 90 GSYRLGVHGAGADIDTLCVFPKHVEREH-FFTIMYDMLKERPEVTEISAVPDAYVPVIKM 148
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
FSG+ ID + ARL++ +P+DL+++ ++IL+N DE+ VRSLNG RVTD ILRLVP +
Sbjct: 149 HFSGIPIDFICARLAVARVPDDLELADNNILKNLDERCVRSLNGSRVTDDILRLVPNVAT 208
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR LR ++ WAK + +YSNV GFLGG+ WA+L+ARICQLYPNA + +V+RFF + QW
Sbjct: 209 FRIALRTIKLWAKCKAIYSNVMGFLGGVAWAMLIARICQLYPNACAASIVNRFFLIMYQW 268
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
+WP PVLL +E+G L ++VW+P+ P D+ H MPIITPAYP M +++NV+ ST +IM+
Sbjct: 269 KWPQPVLLRPLEDGPLQVRVWNPKLYPADRSHRMPIITPAYPSMCATHNVTESTRKIMIQ 328
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
EF+ G ++ + W LF FF+ +K+YL+I S+ +++ W G VE++
Sbjct: 329 EFKNGIDVASNIILGSG--QWSDLFVKSDFFQQFKHYLQITSSSYSSETQLMWSGLVEAK 386
Query: 313 LRQLTLKIERHTYNMLQ-CHPHPGDFSDKSKPLYC 346
LRQL LK+E T +M++ HP+ F K YC
Sbjct: 387 LRQLVLKLE--TVDMIELAHPYVKGF---DKAHYC 416
>gi|67971414|dbj|BAE02049.1| unnamed protein product [Macaca fascicularis]
Length = 548
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 188/411 (45%), Positives = 252/411 (61%), Gaps = 18/411 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFGGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F V + + M+I+ HV R+ LPN V
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVL 502
>gi|18203580|sp|Q9WVP6.2|PAPOB_MOUSE RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
Length = 641
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 207/519 (39%), Positives = 300/519 (57%), Gaps = 56/519 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I +FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + N+A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 336 VMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + +DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKETADKEE-FRTMWVIGLVLKKP-ENSEI 451
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 416
D+ ++ F +QA++ M+ + M+I+ H+ R+ L + + P V
Sbjct: 452 LSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLRRKEL-HQLLPNHV------ 501
Query: 417 KGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREG-- 474
L++K + T + R TD ++ + +++ T PS +G + G
Sbjct: 502 ---------LQKKETHLT----ESVRLTAVTDSSLLLSI-DSENSMTAPSPTGTMKTGPL 547
Query: 475 --------SPIMSTISSSSINLQF-----EHMDANELAG 500
SP ++ +++S N+QF +H++ E +G
Sbjct: 548 TGNPQGRNSPALAVMAASVTNIQFPDVSLQHVNPIESSG 586
>gi|9910588|ref|NP_064327.1| poly(A) polymerase beta [Mus musculus]
gi|5701744|dbj|BAA83086.1| testis-specific poly(A) polymerase [Mus musculus]
gi|120538333|gb|AAI29898.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|120538567|gb|AAI29897.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|148687152|gb|EDL19099.1| poly (A) polymerase beta (testis specific) [Mus musculus]
Length = 642
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 207/519 (39%), Positives = 300/519 (57%), Gaps = 56/519 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 98 IFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 156
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 157 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 216
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I +FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 217 NIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLV 276
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 277 FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + N+A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 337 VMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGL 394
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + +DK + + +GL K+ E
Sbjct: 395 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKETADKEE-FRTMWVIGLVLKKP-ENSEI 452
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 416
D+ ++ F +QA++ M+ + M+I+ H+ R+ L + + P V
Sbjct: 453 LSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLRRKEL-HQLLPNHV------ 502
Query: 417 KGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREG-- 474
L++K + T + R TD ++ + +++ T PS +G + G
Sbjct: 503 ---------LQKKETHLT----ESVRLTAVTDSSLLLSI-DSENSMTAPSPTGTMKTGPL 548
Query: 475 --------SPIMSTISSSSINLQF-----EHMDANELAG 500
SP ++ +++S N+QF +H++ E +G
Sbjct: 549 TGNPQGRNSPALAVMAASVTNIQFPDVSLQHVNPIESSG 587
>gi|426355375|ref|XP_004045099.1| PREDICTED: poly(A) polymerase beta [Gorilla gorilla gorilla]
Length = 637
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 208/520 (40%), Positives = 298/520 (57%), Gaps = 58/520 (11%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV P H R DFF + L EV +L V +A VP
Sbjct: 98 IFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFASFYAKLKLQEEVKDLRAVEEAFVP 156
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 157 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 216
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNAV S LV +FF V
Sbjct: 217 NIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLV 276
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 277 FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSISTRM 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + ++A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 337 VMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLASASTEKQHLEWVGL 394
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKPLYCSYF------MGLQRKQGVPVG 361
VES++R L +E++ + L H +P F + K P + +GL++ + +
Sbjct: 395 VESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWVIGLGLKKPENSEIL 453
Query: 362 EGE-QFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 417
+ +DI+ T ++QAV+ M+ + GM+I+ H+ R+ L
Sbjct: 454 SIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAMHLRRKEL---------------- 494
Query: 418 GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM--PSSSGEFREG- 474
+ L V K + +GR+ TD N + +A C +M PSS+ + G
Sbjct: 495 -----HQLLPHHVLQDKKAHSPEGRRL--TDLNDSSFDLSAGCENSMSVPSSTSTMKTGP 547
Query: 475 ---------SPIMSTISSSSINLQ-----FEHMDANELAG 500
SP ++ +++S ++Q + ++ NE +G
Sbjct: 548 LISSSQGRNSPALAVMTASVADIQATEMSLQQVNTNESSG 587
>gi|55669560|pdb|1Q78|A Chain A, Crystal Structure Of Poly(A) Polymerase In Complex With
3'- Datp And Magnesium Chloride
Length = 514
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 185/402 (46%), Positives = 249/402 (61%), Gaps = 14/402 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRXIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNL 401
D+ ++ F V + + M+I+ HV R+ L
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 493
>gi|291413714|ref|XP_002723110.1| PREDICTED: poly(A) polymerase beta (testis specific)-like
[Oryctolagus cuniculus]
Length = 629
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 193/419 (46%), Positives = 255/419 (60%), Gaps = 20/419 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 98 LFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLREEVRDLRAVEEAFVP 156
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F GV ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 157 VIKLCFDGVEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 216
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNAV S LV +FF V
Sbjct: 217 DIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLV 276
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 277 FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + N+A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 337 VMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGL 394
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 395 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVLKKP-ENSEI 452
Query: 364 EQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRN----LPNFVFPGGVRPS 413
D+ ++ F +QA++ T M+I H+ R+ LPN V P+
Sbjct: 453 LSIDLTYDIQSFTDTVYRQAINSKTFEM-DMKIDAMHLRRKELHQLLPNHVLQKKKHPA 510
>gi|71023817|ref|XP_762138.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
gi|46101730|gb|EAK86963.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
Length = 667
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 183/457 (40%), Positives = 252/457 (55%), Gaps = 60/457 (13%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCV P+H RE DFF ML E EVTE+ VP AHVP
Sbjct: 97 IFTFGSYRLGVHGPGSDIDTLCVVPKHVQRE-DFFSVFESMLKEREEVTEVAGVPTAHVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ KF GV ID +ARL+L + ++L + D++L+N DE+ VRSL G RVTD ILRLVP
Sbjct: 156 LIAAKFMGVDIDFTFARLALPRVEDNLSLEDDNLLRNLDERDVRSLGGSRVTDGILRLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I FR LRC++ WA+RR +YSNV GFLGG+ WA+L ARICQLYPN +VSRFF +
Sbjct: 216 NIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWAMLTARICQLYPNEAAGAIVSRFFII 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QW+WP PVLL IE+G L ++VW+P+ P D+ H MPIITPAYP M +++NVS ST
Sbjct: 276 LYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMPIITPAYPGMCATHNVSQSTQM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M EF+R E+ + + + +WD LF FF YK YL++ S+ +AD W G
Sbjct: 336 VMTSEFKRAAEVVDRVIIGK--TNWDELFAKHDFFFKYKYYLQVIASSGSADLQLKWHGT 393
Query: 309 VESRLRQLTLKIE-----------------------RHTYNMLQCHPHPGDFSDKSKPLY 345
VES++RQL +K+E H ++ P + + +++ +
Sbjct: 394 VESKIRQLVMKLELVPTITCAHPFIKGFDQVSECWNDHEVRLVATGDIPEEVAQRTQKVA 453
Query: 346 C-------------------------------SYFMGLQRKQGVPVGEG-EQFDIRLTVK 373
++++GL + + GEG + DI
Sbjct: 454 ALPETDEAKQAAAEEAARVTEGKEGHRMIYTTTFYIGLSIEPKL-AGEGPRKLDISYPTA 512
Query: 374 EFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGG 409
EF V + + M I V H+ LP +VF GG
Sbjct: 513 EFTGKVKQWEQYDEASMGIVVRHIKWTQLPGYVFEGG 549
>gi|58865618|ref|NP_001012020.1| poly(A) polymerase beta [Rattus norvegicus]
gi|50927350|gb|AAH79046.1| Poly (A) polymerase beta (testis specific) [Rattus norvegicus]
gi|149034991|gb|EDL89711.1| poly (A) polymerase beta (testis specific) [Rattus norvegicus]
Length = 642
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 206/519 (39%), Positives = 298/519 (57%), Gaps = 56/519 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 98 IFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 156
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 157 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 216
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I +FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 217 NIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLV 276
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 277 FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + N+A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 337 VMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGL 394
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 395 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENVDKEE-FRTMWVIGLVLKKP-ENSEI 452
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 416
D+ ++ F +QA++ M+ + M+I+ H+ R+ L + + P V
Sbjct: 453 LSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLRRKEL-HQLLPNHV------ 502
Query: 417 KGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREG-- 474
L++K + T +G + +D+ +++ T PS +G + G
Sbjct: 503 ---------LQKKETHLT-----EGVRLTAVNDSSLLLSIDSENSMTAPSPTGTIKTGPL 548
Query: 475 --------SPIMSTISSSSINLQF-----EHMDANELAG 500
SP ++ +++S N+QF +H++ E +G
Sbjct: 549 TANPQGRNSPALAVMAASVTNIQFPDVSLQHVNPIESSG 587
>gi|343427736|emb|CBQ71262.1| probable PAP1-poly(A) polymerase [Sporisorium reilianum SRZ2]
Length = 658
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 202/530 (38%), Positives = 280/530 (52%), Gaps = 65/530 (12%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCV P+H RE DFF ML E EVTE+ VP AHVP
Sbjct: 97 IFTFGSYRLGVHGPGSDIDTLCVVPKHVQRE-DFFSVFEGMLKEREEVTEVAGVPTAHVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ KF GV ID +ARLSL + + L + D++L+N DE+ VRSL G RVTD ILRLVP
Sbjct: 156 LIAAKFMGVDIDFTFARLSLPRVEDSLSLEDDNLLRNLDERDVRSLGGSRVTDGILRLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I FR LRC++ WA+RR +YSNV GFLGG+ WA+L ARICQLYPN +VSRFF +
Sbjct: 216 NIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWAMLTARICQLYPNEAAGAIVSRFFII 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QW+WP PVLL IE+G L ++VW+P+ P D+ H MPIITPAYP M +++NVS ST
Sbjct: 276 LYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMPIITPAYPGMCATHNVSQSTQM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M EF+R E+ + + + W LF FF YK YL++ S+ +AD W G
Sbjct: 336 VMTSEFKRAAEVVDRVIIGK--THWSELFAKHDFFFKYKYYLQVIASSGSADLQLKWHGT 393
Query: 309 VESRLRQLTLKIE-----------------------RHTYNMLQCHPHPGDFSDKSKPL- 344
VES++RQL +K+E H M+ P + +++ L
Sbjct: 394 VESKIRQLVMKLELVPTITCAHPFIKGFDQVSECWNDHEVRMVATGEVPDAVAQRTQKLG 453
Query: 345 -----------------------------YCS-YFMGLQRKQGVPVGEG-EQFDIRLTVK 373
Y + +++GL + + GEG + DI
Sbjct: 454 ALPATDSAQQAAADEAAKVAEGKEGHRMIYTTMFYIGLSIEPKL-AGEGPRKLDISYPTA 512
Query: 374 EFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGV-RPSRPSKGTWDSRRALERKVS 431
EF V + + M I V H+ LP +VF GG R + + G + +RA K
Sbjct: 513 EFTGKVKQWDQYDEASMGIVVRHIKWTQLPAYVFEGGENRVAAAAAGKVNGKRAKSGKKK 572
Query: 432 SHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFRE--GSPIMS 479
+ T GA+ + + D +T + A M S + + R G+P+ +
Sbjct: 573 NGT--GAEGAGQANGSLDEGETVTAVDQADAEMASPTKKQRTVPGAPLAA 620
>gi|5456696|gb|AAD43624.1|AF039957_1 testis-specific poly(A) polymerase [Mus musculus]
Length = 641
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 206/519 (39%), Positives = 299/519 (57%), Gaps = 56/519 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RS NGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSFNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I +FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + N+A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 336 VMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + +DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKETADKEE-FRTMWVIGLVLKKP-ENSEI 451
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 416
D+ ++ F +QA++ M+ + M+I+ H+ R+ L + + P V
Sbjct: 452 LSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLRRKEL-HQLLPNHV------ 501
Query: 417 KGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREG-- 474
L++K + T + R TD ++ + +++ T PS +G + G
Sbjct: 502 ---------LQKKETHLT----ESVRLTAVTDSSLLLSI-DSENSMTAPSPTGTMKTGPL 547
Query: 475 --------SPIMSTISSSSINLQF-----EHMDANELAG 500
SP ++ +++S N+QF +H++ E +G
Sbjct: 548 TGNPQGRNSPALAVMAASVTNIQFPDVSLQHVNPIESSG 586
>gi|393246171|gb|EJD53680.1| polymerase [Auricularia delicata TFB-10046 SS5]
Length = 610
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 200/498 (40%), Positives = 281/498 (56%), Gaps = 49/498 (9%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCV P+H RE DFF ML E+ V E+ VP+A+VP
Sbjct: 88 IFTYGSYRLGVHGPGSDIDTLCVVPKHVNRE-DFFDVFEPMLRELEGVAEVSGVPEAYVP 146
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K K S + +DL++AR++L + +DLD+S D+IL+N DE+ VRSL G R+TD+ILRLVP
Sbjct: 147 IIKTKISDIPLDLVFARVALSSVNDDLDLSDDNILRNLDERCVRSLGGSRMTDEILRLVP 206
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
FR LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQLYPNA ++VSRFF +
Sbjct: 207 NQAVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNANAGVIVSRFFII 266
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+W+WPNPVLL IEEG L ++VW+P+ P D+ H MPIITP YP M S++NVS ST
Sbjct: 267 MREWKWPNPVLLKQIEEGPLQVRVWNPKLYPSDRAHRMPIITPNYPSMCSTHNVSQSTQM 326
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
I+ E +R EI + + A W LF FF Y+ YL++ S ENAD W G
Sbjct: 327 IIKHELRRASEIVDRIIMGSA--TWSELFAKHDFFHKYRYYLQVIASTENADLQLKWAGT 384
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF------------------------------- 337
VESRLRQL +K+E + +++ HP F
Sbjct: 385 VESRLRQLVMKLE-YVDSLVLAHPFIKGFDQTHYLLTEEEVRFVAQGFVSDVISKRTKED 443
Query: 338 ---SDKSKPLYCSYF---MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY-TLRKPGMQ 390
D ++ +Y + F + ++ KQ VG + DI EF + V M+ M
Sbjct: 444 IEGKDGAQIVYTTTFYIGLAIEPKQPGAVGP-RKLDISYPTAEFTKLVKMWENFDDSKMG 502
Query: 391 ISVAHVTRRNLPNFVF-PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD 449
I V H+ LP++VF P +P + K T S + S++ D K++++
Sbjct: 503 IVVRHIKSTMLPDYVFDPSERQPKQQLKRTKSS-----KSTSNNADASPDMPNKKRRSSL 557
Query: 450 NVDTHLRNAKCHATMPSS 467
N+ R+ + +P S
Sbjct: 558 NMSETPRSESALSALPPS 575
>gi|311250845|ref|XP_003124320.1| PREDICTED: poly(A) polymerase beta-like [Sus scrofa]
Length = 640
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 192/420 (45%), Positives = 262/420 (62%), Gaps = 22/420 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLHEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAVKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + ++A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 336 VMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIALLASAPTEKQHLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMG--LQRKQGVPVG 361
VES++R L +E++ + L Q P P + DK + + +G L+R + +
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPRESPDKEE-FRTMWVIGLVLKRPENSDIL 452
Query: 362 EGE-QFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTRRN----LPNFVFPGGVRPS 413
+ +DI+ T ++QAV+ M+ + M+I+ H+ R+ LPN V P PS
Sbjct: 453 SIDLTYDIQSFTDTVYRQAVNSKMFEM---DMKIAAMHLRRKELHQLLPNHVLPQKKTPS 509
>gi|351701193|gb|EHB04112.1| Poly(A) polymerase alpha, partial [Heterocephalus glaber]
Length = 736
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 189/414 (45%), Positives = 253/414 (61%), Gaps = 24/414 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVP-DAHV 67
+ G + VH GADID LCV PRH R DFF + L EV +L +A V
Sbjct: 94 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRVCKWEAFV 152
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LV
Sbjct: 153 PVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLV 212
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF
Sbjct: 213 PNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFL 272
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 273 VFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTR 332
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
+M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 333 MVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVG 390
Query: 308 WVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGE 362
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 391 LVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK----TE 445
Query: 363 GEQFDIRLT--VKEFKQAVSMYTLR----KPGMQISVAHVTRRN----LPNFVF 406
E + LT ++ F V + + M+I+ HV R+ LPN V
Sbjct: 446 NENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVL 499
>gi|388857257|emb|CCF49099.1| probable PAP1-poly(A) polymerase [Ustilago hordei]
Length = 672
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 187/457 (40%), Positives = 254/457 (55%), Gaps = 60/457 (13%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCV P+H RE DFF ML E EVTE+ VP AHVP
Sbjct: 97 IFTFGSYRLGVHGPGSDIDTLCVVPKHVQRE-DFFSVFETMLKEREEVTEVAGVPTAHVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ KF GV ID +ARLSL + + L + D++L+N DE+ VRSL G RVTD ILRLVP
Sbjct: 156 LIASKFMGVDIDFTFARLSLSRVEDSLSLEDDNLLRNLDERDVRSLGGSRVTDGILRLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I FR LRC++ WA++R +YSNV GFLGG+ WA+L ARICQLYPN +VSRFF +
Sbjct: 216 NIHVFRMALRCIKLWAQQRAIYSNVMGFLGGVAWAMLTARICQLYPNEAAGAIVSRFFII 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+ QW+WP PVLL IE+G L ++VW+P+ P D+ H MPIITPAYP M +++NVS ST
Sbjct: 276 FYQWKWPQPVLLTPIEDGPLSVRVWNPKLYPSDRLHRMPIITPAYPGMCATHNVSQSTQM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M EF+R E+ + + + DW LF FF YK YL++ S+ +AD W G
Sbjct: 336 VMTSEFKRAAEVVDRVIIGK--TDWCELFAKHDFFFKYKYYLQVIASSGSADLQLKWHGT 393
Query: 309 VESRLRQLTLKIE-------RHTY-----NMLQCH-------PHPGDFSDK--------- 340
VES++RQL +K+E H + + +CH GD ++
Sbjct: 394 VESKIRQLVMKLELVPTITCAHPFIKGFDQVSECHNDHEVRLVATGDIPEQVAQRTQKVA 453
Query: 341 -------------------------SKPLY-CSYFMGLQRKQGVPVGEG-EQFDIRLTVK 373
+ +Y ++++GL + + GEG + DI
Sbjct: 454 ALPETEEAKKAAEEEAAKITEGKEGHRMIYTTTFYIGLSIEPKL-AGEGPRKLDISYPTA 512
Query: 374 EFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGG 409
EF V + + M I V H+ LP +VF GG
Sbjct: 513 EFTGKVKQWEQYDEASMGIVVRHIKWTQLPGYVFEGG 549
>gi|348554483|ref|XP_003463055.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Cavia porcellus]
Length = 741
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 185/397 (46%), Positives = 247/397 (62%), Gaps = 18/397 (4%)
Query: 23 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 82
GADID LCV PRH R DFF + L EV +L V +A VPV+K F G+ ID+L
Sbjct: 113 GADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDIL 171
Query: 83 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 142
+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++
Sbjct: 172 FARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKL 231
Query: 143 WAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCA 202
WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL
Sbjct: 232 WAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQ 291
Query: 203 IEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE 262
EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++EF++G I +
Sbjct: 292 PEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITD 351
Query: 263 AMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIER 322
+ ++A +W LFE FF+ YK+Y+ + SA W G VES++R L +E+
Sbjct: 352 EILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEK 409
Query: 323 HTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ 377
+ + L Q P P + DK + + +GL K+ E D+ ++ F
Sbjct: 410 NEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTD 467
Query: 378 AVSMYTLR----KPGMQISVAHVTRRN----LPNFVF 406
V + + M+I+ HV R+ LPN V
Sbjct: 468 TVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVL 504
>gi|354467761|ref|XP_003496337.1| PREDICTED: poly(A) polymerase beta-like [Cricetulus griseus]
Length = 642
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 202/504 (40%), Positives = 291/504 (57%), Gaps = 51/504 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 98 IFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 156
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 157 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 216
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I +FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 217 NIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLV 276
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 277 FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + N+A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 337 VMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGL 394
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 395 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENVDKEE-FRTMWVIGLVLKKP-ENSES 452
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 416
D+ ++ F +QA++ M+ + M+I+ H+ R+ L + + P V
Sbjct: 453 LSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLKRKEL-HQLLPNHV------ 502
Query: 417 KGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREG-- 474
L++K + T +G + +D+ +++ + PS +G + G
Sbjct: 503 ---------LQKKETHLT-----EGVRLTAVNDSSLLLSVDSENSMSAPSPTGLVKTGPL 548
Query: 475 --------SPIMSTISSSSINLQF 490
SP ++ +++S N+QF
Sbjct: 549 TGNPQGRSSPALAVMTASVTNIQF 572
>gi|320165027|gb|EFW41926.1| poly(A) polymerase [Capsaspora owczarzaki ATCC 30864]
Length = 698
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 190/437 (43%), Positives = 260/437 (59%), Gaps = 35/437 (8%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHG GADIDTLC+ PR TR+ DFF L ++L E E +EL PV A P
Sbjct: 133 VFTFGSYRLGVHGRGADIDTLCIAPRGVTRD-DFFQSLVELLREQSETSELTPVTGAFTP 191
Query: 69 VMKFKFSGV-----------SIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSLNG 116
++ KFSGV IDLL+A L + + E+L++ ++IL+N D TVRS+NG
Sbjct: 192 IITLKFSGVDNRSLASSAPLKIDLLFAELPGVLSVSENLNVMDNAILRNCDMATVRSVNG 251
Query: 117 CRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA 176
RV + IL+LVP NFR LR ++ WA RGVYSN GFLGGI WA+LVAR CQLYP +
Sbjct: 252 SRVANYILQLVPDRDNFRMALRAIKLWANNRGVYSNKLGFLGGIAWAILVARTCQLYPKS 311
Query: 177 VPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-SLGLQVWDPRRNPKDKYHLMPIITPAYPC 235
S +V+RFFRV+ W WP PV L A+EE SL L W+P N D HLMPIITPAYP
Sbjct: 312 SASTIVARFFRVFHNWSWPTPVWLKAMEEDRSLALPNWNPVINASDARHLMPIITPAYPS 371
Query: 236 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI- 294
MNS++NVS STLR+M +EF RG ++ +E + V W LFE FF YK Y++I
Sbjct: 372 MNSTHNVSMSTLRVMTEEFARGMQVTLDIEVGK--VGWPVLFEKNNFFTRYKTYIQISAR 429
Query: 295 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS-----DKSKPLYCSYF 349
+ EN D+ R W+G+VES+LR +E + HP+P FS + +P+Y + F
Sbjct: 430 TEENQDEHRQWEGFVESKLRMFLQWLE-SAPGVDYVHPYPKTFSQTDTTESGQPVYLTIF 488
Query: 350 ---MGLQRKQGVPVGEGEQFDIRLTVKEFKQAV---SMYTLRKPGMQISVAHVTRRNLPN 403
M ++++G + ++ V++F++A+ + + P + + V + R LP
Sbjct: 489 YFGMMFKKQEGT---DPRVIELGNIVRDFREAIKNQNASFVNNPRVDLVVLPMKRPQLPE 545
Query: 404 FVFPGGVRPS---RPSK 417
VF GGVRP+ RP K
Sbjct: 546 NVFEGGVRPAPTKRPKK 562
>gi|402226328|gb|EJU06388.1| polymerase [Dacryopinax sp. DJM-731 SS1]
Length = 620
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 196/491 (39%), Positives = 274/491 (55%), Gaps = 59/491 (12%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VHGPG+DIDT+CV P+H +RE FF ML M VTE+ VP+A VPV+K
Sbjct: 90 GSYRLGVHGPGSDIDTICVVPKHVSREH-FFTVFEPMLLNMEGVTEVSGVPEAFVPVIKA 148
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
SG+ +D L+ARL+L IP+DL++ D++L+N DE+ VRSL G RVTD+ILRLVP+
Sbjct: 149 IVSGIHVDFLFARLNLTQIPDDLELKDDNLLRNLDERDVRSLGGSRVTDEILRLVPQPVV 208
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR LR ++ WA+RR +YSNV GFLGG+ WA+LVARICQL+P + ++SRFF + QW
Sbjct: 209 FRDALRAVKLWAQRRAIYSNVIGFLGGVAWAMLVARICQLFPKYDAASILSRFFHIIGQW 268
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WP P+LL AIE+G L ++VW+P+ P D+ HLMPIITPAYP M +++NV+ ST++IM +
Sbjct: 269 AWPQPILLKAIEDGPLNVRVWNPQIYPSDRTHLMPIITPAYPSMCATHNVTHSTMKIMQN 328
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
E +RG +I E + +A W LFE FF Y+ YL+I I++ N + W G VES+
Sbjct: 329 ELRRGSQIVEKI--IQAGEPWANLFEKHDFFHMYRYYLQIIITSGNQEMYHKWAGTVESK 386
Query: 313 LRQLTLKIERHTYNMLQCHP------------------------------------HPGD 336
+R L K+E + HP H G
Sbjct: 387 IRLLVGKLELQEAVEI-AHPFTKGLDQVVCCLNDDEVRAVAKYEMDDEVLKRSETEHEGK 445
Query: 337 FSDKSKPLYCSYFMGLQRKQGV---PVGEG--EQFDIRLTVKEFKQAVSMYTL-RKPGMQ 390
SK ++++GL GV P G+ + DI EF + V ++ L + M
Sbjct: 446 -DGVSKVFMKTFYIGL----GVEPKPAGQTGPRKLDISYPTIEFVKTVKLWDLYEEEQMG 500
Query: 391 ISVAHVTRRNLPNFVFPGGVRPSRPSKGT-------WDSRRALERKVSSHTKPGADDGRK 443
I + +V LP+ F GGVR + KG D ++ L R S H G K
Sbjct: 501 IVIRYVKHSALPDNCFEGGVRQALAGKGVKRTKSKAGDGKKPLSR-TSPHDVSGDYSPHK 559
Query: 444 RKQTDDNVDTH 454
+++ D H
Sbjct: 560 KQRKDSLTGDH 570
>gi|443899034|dbj|GAC76367.1| poly(a) polymerase and related nucleotidyltransferases [Pseudozyma
antarctica T-34]
Length = 672
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/457 (40%), Positives = 255/457 (55%), Gaps = 60/457 (13%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCV P+H RE DFF ML E EVTE+ VP AHVP
Sbjct: 97 IFTFGSYRLGVHGPGSDIDTLCVVPKHVQRE-DFFSVFEGMLKEREEVTEVAGVPTAHVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ KF GV ID +ARL+L + ++L + D++L++ DE+ VRSL G RVTD ILRLVP
Sbjct: 156 LIASKFMGVDIDFTFARLALPRVEDNLSLEDDNLLRSLDERDVRSLGGSRVTDGILRLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I FR LRC++ WA+RR +YSNV GFLGG+ WA+L ARICQLYPN +VSRFF +
Sbjct: 216 NIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWAMLTARICQLYPNEAAGAIVSRFFII 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+ QW+WP PVLL IE+G L ++VW+P+ P D+ H MPIITPAYP M +++NVS ST
Sbjct: 276 FYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMPIITPAYPGMCATHNVSQSTQM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M EF+R E+ + + + DW LF F+ YK YL++ S+ +AD W G
Sbjct: 336 VMTSEFKRAAEVVDRVIIGK--TDWSELFAKHDFYFKYKYYLQVIASSGSADLQLKWHGT 393
Query: 309 VESRLRQLTLKIE-------RHTY-----NMLQCH-------PHPGDFSDK--------- 340
VES++RQL +K+E H + + +CH GD D+
Sbjct: 394 VESKIRQLVMKLELVPTITCAHPFIKGFDQVSECHNDNEVRLVATGDIPDEVAQRTQKVD 453
Query: 341 -------------------------SKPLY-CSYFMGLQRKQGVPVGEGE-QFDIRLTVK 373
+ +Y ++++GL + + GEG + DI
Sbjct: 454 ALPETEEAKQAAEAEAAKATEGKEGHRMIYTTTFYIGLSIEPKL-AGEGHRKLDISYPTA 512
Query: 374 EFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGG 409
EF V + + M I V H+ LP +VF GG
Sbjct: 513 EFTSKVKQWEQYDEASMGIVVRHIKWTQLPAYVFEGG 549
>gi|426254899|ref|XP_004021112.1| PREDICTED: poly(A) polymerase beta [Ovis aries]
Length = 639
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 186/411 (45%), Positives = 251/411 (61%), Gaps = 18/411 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 98 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLHEEVKDLRAVEEAFVP 156
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 157 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 216
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 217 NIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLV 276
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 277 FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + ++A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 337 VMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGL 394
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 395 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-FRTMWVIGLVLKKP-ENSEV 452
Query: 364 EQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F V + + M+I+ H+ R+ LPN V
Sbjct: 453 LSIDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHLKRKELHQLLPNHVL 503
>gi|395845544|ref|XP_003804110.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase beta [Otolemur
garnettii]
Length = 637
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 184/403 (45%), Positives = 250/403 (62%), Gaps = 16/403 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 98 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 156
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 157 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 216
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNAV S LV +FF V
Sbjct: 217 NIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLV 276
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 277 FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + ++A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 337 VMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGL 394
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + +K + + +GL K+ E
Sbjct: 395 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPEKEE-FRTMWVIGLVLKKP-ENSEI 452
Query: 364 EQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNL 401
D+ ++ F +QA++ M+I+ H+ R+ L
Sbjct: 453 LSIDLTYDIQSFTDTVYRQAINTKMFEM-DMKIAAMHLKRKEL 494
>gi|344301689|gb|EGW31994.1| Poly(A) polymerase PAPalpha [Spathaspora passalidarum NRRL Y-27907]
Length = 556
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 163/341 (47%), Positives = 228/341 (66%), Gaps = 12/341 (3%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + V+GPG+DIDTL V P+H TRE DFF Q++ + PE+ E+ VPDA VP++K
Sbjct: 86 FGSYRLGVYGPGSDIDTLVVVPKHVTRE-DFFTVFEQIIRKRPELQEIASVPDAFVPIIK 144
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
+F G+SIDL+ ARL++ +P D+ + ++L+N DE+ +RSLNG RVTD+IL+LVPK
Sbjct: 145 IEFDGISIDLILARLNVPRVPLDMTLDDKNLLKNIDERDLRSLNGTRVTDEILQLVPKPT 204
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
F+ LRC++ WA++R VY NV GF GG+ WA+LVARICQLYPNAV +++V +FF +YT+
Sbjct: 205 VFKHALRCIKLWAQQRAVYGNVFGFPGGVAWAMLVARICQLYPNAVSAVIVEKFFNIYTK 264
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W WP PVLL IE+G L ++VW+PR P D+ H MP+ITPAYP M +++N+++ST +++M
Sbjct: 265 WNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCATHNITSSTQKVIM 324
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKGWVE 310
E RG E+ + N W L E FF YK YL I + ++D+ W G VE
Sbjct: 325 SELARGAEVMNQI--NLGKSSWSALLERHDFFHKYKFYLCIVAATTSSDEEHLKWSGLVE 382
Query: 311 SRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMG 351
S+LR L LK+E T + HP+ DFSD SY +G
Sbjct: 383 SKLRHLVLKLEV-TDGIELAHPYVKDFSD-------SYILG 415
>gi|296192583|ref|XP_002744135.1| PREDICTED: poly(A) polymerase beta [Callithrix jacchus]
Length = 634
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 201/513 (39%), Positives = 289/513 (56%), Gaps = 47/513 (9%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LC+ PRH R DFF + L EV +L V +A VP
Sbjct: 95 IFTFGSYRLGVHTKGADIDALCIAPRHVDRS-DFFTSFYAKLKLQEEVKDLRAVEEAFVP 153
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L++ D +++RSLNGCRVTD+IL LVP
Sbjct: 154 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKDLDIRSIRSLNGCRVTDEILHLVP 213
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNAV S LV +FF V
Sbjct: 214 NIDNFRLTLRAIKLWAKCHSIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLV 273
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 274 FSEWEWPNPVLLKEPEEQNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 333
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + N+A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 334 VMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGL 391
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L H +P F + K P + +GL K+ E
Sbjct: 392 VESKIRILVGSLEKNEFITL-AHVNPQSFLAPKENPGKKEFRTMWVIGLVLKKP-ENSEI 449
Query: 364 EQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKG 418
D+ ++ F +QAV+ + + GM+I+ H+ R+ L
Sbjct: 450 LSIDLTYDIQSFTDTVYRQAVN-SKMFETGMKIAAMHLRRKEL----------------- 491
Query: 419 TWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREG---- 474
+ L V K + +GR+ +D + ++PSS+ + G
Sbjct: 492 ----HQLLPHHVLQEKKAHSPEGRRLTDLNDRSFDLSAGGENSISVPSSTSTMKTGPLIS 547
Query: 475 ------SPIMSTISSSSINLQFEHMDANELAGS 501
SP ++ +++S N++ + ++ S
Sbjct: 548 SSQGRNSPALAVMTASVTNIRATEISLQQVNTS 580
>gi|388578995|gb|EIM19325.1| Poly(A) polymerase, partial [Wallemia sebi CBS 633.66]
Length = 557
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 183/452 (40%), Positives = 258/452 (57%), Gaps = 53/452 (11%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+ PGADIDTLCV P+H +RE DFF +L EV+ VPDA+VP
Sbjct: 77 IFTFGSYRLGVNQPGADIDTLCVVPKHVSRE-DFFDVFEPLLKTREEVSVCAGVPDAYVP 135
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN-------GCRVTD 121
++K SG+ ID L ARL+L IP+DL+++ D++L+N DE+ VRSLN G RVTD
Sbjct: 136 IIKTTISGIEIDFLVARLALATIPDDLELADDNLLKNLDERCVRSLNDNLTIIIGSRVTD 195
Query: 122 QILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSML 181
+ILR+VP +Q FR +LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQLYPN +
Sbjct: 196 EILRVVPNVQVFRESLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNENAGAV 255
Query: 182 VSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYN 241
+++FF + QW+WP+PVLL IE+G L ++VW+P+ P D+ H MPIITPAYP M S++N
Sbjct: 256 IAKFFTILYQWKWPHPVLLKEIEDGPLKVRVWNPKIYPSDRAHRMPIITPAYPSMCSTHN 315
Query: 242 VSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD 301
V ST +M EF+RG +I + + K W LF FF YK+YL+I S + A+
Sbjct: 316 VGPSTQEVMRQEFKRGMDILDGIHK--GTTTWSQLFNKHEFFSKYKHYLQIIASGQTAES 373
Query: 302 LRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD---------------------- 339
+ W G VES++RQL K+E + HP FS+
Sbjct: 374 QKKWSGAVESKVRQLVSKLEL-VDGIELAHPFVKGFSEVFICLNDEEVQHAAEYNPSEEV 432
Query: 340 ---KSKP--------------LYCS-YFMGLQRKQGVP-VGEGEQFDIRLTVKEFKQAVS 380
KP +Y S +++GL + P E ++ EF +
Sbjct: 433 KERSKKPEEYENKEAEDGIHRVYISTFYIGLAIQPRNPETNEKRTLNLTYPTNEFMKLTK 492
Query: 381 MYTLRKPG-MQISVAHVTRRNLPNFVFPGGVR 411
++ G M+I V ++ LP+ VF GG+R
Sbjct: 493 LWDQFVEGEMKIFVKNIKASALPDVVFEGGIR 524
>gi|115530785|emb|CAL49411.1| poly(A) polymerase alpha (pap) [Xenopus (Silurana) tropicalis]
Length = 474
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 177/376 (47%), Positives = 241/376 (64%), Gaps = 10/376 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF ++ L + EV +L V +A VP
Sbjct: 94 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFSSFYEKLKQQEEVKDLRSVEEAFVP 152
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 153 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 212
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 213 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 272
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 273 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRA 332
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + + +A +W LF+ FF+ YK+Y+ + SA W G
Sbjct: 333 VMVEEFKQGLAITDEILLGKA--EWSKLFDAPNFFQKYKHYILLLASAPTEKQRLEWVGL 390
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + ++K + + +GL K+ + E
Sbjct: 391 VESKIRILVGSLEKNEFITLAHVNPQSFPAPSENTEKEE-FRTMWVIGLVFKK-MENSEN 448
Query: 364 EQFDIRLTVKEFKQAV 379
D+ ++ F V
Sbjct: 449 LSVDLTYDIQSFTDTV 464
>gi|330340378|ref|NP_001193351.1| poly(A) polymerase beta [Bos taurus]
Length = 642
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 187/414 (45%), Positives = 256/414 (61%), Gaps = 24/414 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 98 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLHEEVKDLRAVEEAFVP 156
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 157 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 216
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 217 NIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLV 276
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR +P D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 277 FSEWEWPNPVLLKEPEERNLNLPVWDPRVSPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G I + ++A +W LFE +FF+ YK+Y+ + SA W G
Sbjct: 337 VMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGL 394
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 395 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-FRTMWVIGLVLKKP-ENSEV 452
Query: 364 EQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN----LPNFVF 406
D+ ++ F +QA++ M+ + M+I+ H+ R+ LPN V
Sbjct: 453 LSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLKRKELHQLLPNHVL 503
>gi|239835858|gb|ACS29269.1| pap1 [Meyerozyma guilliermondii]
Length = 564
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 158/332 (47%), Positives = 228/332 (68%), Gaps = 5/332 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+GPG+DIDTL V P+H RE DFF QM+ + PE+ E+ VPDA VP
Sbjct: 83 IFTFGSYRLGVYGPGSDIDTLIVVPKHVVRE-DFFTIFDQMIRQRPELEEITAVPDAFVP 141
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ +FSG+SIDL++ARL++ +P D+ + +++L+N DE +R+LNG RVTDQIL+LVP
Sbjct: 142 IIMIEFSGISIDLIFARLNVSRVPLDMTLEDNNLLKNIDENDMRALNGTRVTDQILQLVP 201
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K+ F+ LRC++ WA++R VY N+ GF GG+ WA+LVARICQLYPNAV +++V +FF +
Sbjct: 202 KVTVFKHALRCIKLWAQQRAVYGNMFGFPGGVAWAMLVARICQLYPNAVSAVIVEKFFNI 261
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
YT+W WP PVLL IE+G L ++VW+PR P D+ H MP+ITPAYP M +++N+++ST +
Sbjct: 262 YTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRQHKMPVITPAYPSMCATHNINSSTQK 321
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRN-WKG 307
++M+E +RG E+ + N W LF+ FF YK YL I + E ++ + W G
Sbjct: 322 VIMNELERGSELMAQISLNNK--TWADLFQRHDFFHRYKFYLCIIAATEGTNEEHSKWSG 379
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 339
VES+LR L K+E T + HP+ DFSD
Sbjct: 380 MVESKLRILIQKLEL-TDGIALAHPYVKDFSD 410
>gi|68482706|ref|XP_714750.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
gi|3334283|sp|O42617.1|PAP_CANAL RecName: Full=Poly(A) polymerase PAPalpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|2696030|dbj|BAA23802.1| poly A polymerase [Candida albicans]
gi|5771514|gb|AAD51412.1| unknown [Candida albicans]
gi|46436342|gb|EAK95706.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
Length = 558
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 156/332 (46%), Positives = 230/332 (69%), Gaps = 5/332 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+GPG+DIDTL V P+H TR+ DFF ++ + PE+ E+ VPDA+VP
Sbjct: 83 VFTFGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFSVFADIIRKRPELEEIACVPDAYVP 141
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +F G+SIDL+ ARL++ +P DL + ++L+N DE+ +RSLNG RVTD+IL+LVP
Sbjct: 142 IIKLEFDGISIDLIMARLNIPRVPLDLTLDDKNLLKNLDEKDLRSLNGTRVTDEILQLVP 201
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K F+ LRC++ WA++R VY N+ GF GG+ WA+LVARICQLYPNAV S +V +FF +
Sbjct: 202 KPTVFKHALRCIKLWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSSAIVEKFFNI 261
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
YT+W WP PVLL +IE+G L ++VW+PR P D+ H MP+ITPAYP M +++N+++ST +
Sbjct: 262 YTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCATHNITSSTQK 321
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-RIDISAENADDLRNWKG 307
+++ E RG I + + + W LFE +FF YK YL + S ++A++ + W G
Sbjct: 322 VILAELSRGSSIMQEIHAGKK--TWSDLFEKHSFFYKYKFYLCVVAASIDSAEEHKKWSG 379
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 339
++ES+LRQL LK+E + HP+ DFS+
Sbjct: 380 FIESKLRQLVLKLEV-AEGVEIAHPYVKDFSN 410
>gi|238882575|gb|EEQ46213.1| Poly(A) polymerase [Candida albicans WO-1]
Length = 558
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 156/332 (46%), Positives = 230/332 (69%), Gaps = 5/332 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+GPG+DIDTL V P+H TR+ DFF ++ + PE+ E+ VPDA+VP
Sbjct: 83 VFTFGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFSVFADIIRKRPELEEIACVPDAYVP 141
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +F G+SIDL+ ARL++ +P DL + ++L+N DE+ +RSLNG RVTD+IL+LVP
Sbjct: 142 IIKLEFDGISIDLIMARLNIPRVPLDLTLDDKNLLKNLDEKDLRSLNGTRVTDEILQLVP 201
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K F+ LRC++ WA++R VY N+ GF GG+ WA+LVARICQLYPNAV S +V +FF +
Sbjct: 202 KPTVFKHALRCIKLWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSSAIVEKFFNI 261
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
YT+W WP PVLL +IE+G L ++VW+PR P D+ H MP+ITPAYP M +++N+++ST +
Sbjct: 262 YTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCATHNITSSTQK 321
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-RIDISAENADDLRNWKG 307
+++ E RG I + + + W LFE +FF YK YL + S ++A++ + W G
Sbjct: 322 VILAELSRGSSIMQEIHAGKK--TWSDLFEKHSFFYKYKFYLCVVAASIDSAEEHKKWSG 379
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 339
++ES+LRQL LK+E + HP+ DFS+
Sbjct: 380 FIESKLRQLVLKLEV-AEGVEIAHPYVKDFSN 410
>gi|405117907|gb|AFR92682.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
grubii H99]
Length = 644
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 185/440 (42%), Positives = 254/440 (57%), Gaps = 42/440 (9%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VHGPG+DIDT+CV PRH RE FFGE ML P VTE+ V A VPVMK
Sbjct: 91 GSYRLGVHGPGSDIDTICVCPRHIYREH-FFGEFQDMLRAWPAVTEISAVESAFVPVMKT 149
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
SGV +DLL+AR++L + LDI +D IL+ D+ + RSLNG RVTD IL LVP +
Sbjct: 150 VISGVEVDLLFARVNLPEAGDSLDIEKDEILRGVDDASQRSLNGPRVTDMILNLVPDVAT 209
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FRT LR +R WAKRRG+YSNV GF GG+ WALL ARICQLYP A P+ ++ +FF +Y QW
Sbjct: 210 FRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTARICQLYPAAAPATIIGKFFPIYYQW 269
Query: 193 RWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIM 250
WP PVLL I+ G +Q VW+P+ + +D+ H MP+ITPAYP M S++N+++ST+ I+
Sbjct: 270 SWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAYPSMCSTHNITSSTMSII 329
Query: 251 MDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVE 310
E R +I + + K D W LFE FF YK Y+++ SA +D +++W G VE
Sbjct: 330 RKEMLRAMQITDEILKT-PDSSWIPLFEKVDFFSMYKTYVQVVASASTSDGIKDWSGMVE 388
Query: 311 SRLRQLTLKIERHTYNMLQCHPHPG--------------------------------DFS 338
SR+R L +E +T ++ HP G D
Sbjct: 389 SRIRTLVGDLE-NTDCIITAHPQVGGVNRLFYCLTEEEQAAASQGELTAEMIDRTEEDVK 447
Query: 339 DKS-KPLYC-SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVA-- 394
DK + +Y S+F+GL+ ++ G ++ K+F AV + M++SV
Sbjct: 448 DKEHRKIYTKSFFIGLEIEKKSKETGGRVLNLFYPSKKF-CAVCQNWDKYNEMEMSVILR 506
Query: 395 HVTRRNLPNFVFPGGVRPSR 414
R LP++VFP G+ S+
Sbjct: 507 PAKRSELPSYVFPDGMPKSK 526
>gi|119359931|dbj|BAF41975.1| testis-specific poly(A) polymerase [Homo sapiens]
Length = 637
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 207/520 (39%), Positives = 292/520 (56%), Gaps = 58/520 (11%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV P H R DFF + L EV +L V +A VP
Sbjct: 98 IFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKLKLQEEVKDLRAVEEAFVP 156
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 157 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 216
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAK +YSN+ GF GG++WA+LVAR CQLYPNAV S LV ++F V
Sbjct: 217 NIDNFRLTLRAIKLWAKCHNIYSNILGFHGGVSWAMLVARTCQLYPNAVASTLVRKYFLV 276
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 277 FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSISTRM 336
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++ F++G I + +A W LFE +FF+ YK+Y+ + SA W G
Sbjct: 337 VMIEVFKQGLAITHEILLTKA--VWSKLFEAPSFFQKYKHYIVLLASASTEKQHLEWVGL 394
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQ---GVPV 360
VES++R L +E++ + L H +P F + K P + +GL K+ +
Sbjct: 395 VESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWVIGLGLKKPDNSEIL 453
Query: 361 GEGEQFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 417
+DI+ T ++QAV+ M+ + GM+I+ H+ R+ L
Sbjct: 454 SIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAMHLRRKEL---------------- 494
Query: 418 GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM--PSSSGEFREG- 474
+ L V K + +GR+ TD N + +A C +M PSS+ + G
Sbjct: 495 -----HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDLSAGCENSMSVPSSTSTMKTGP 547
Query: 475 ---------SPIMSTISSSSINLQ-----FEHMDANELAG 500
SP ++ +++S N+Q + ++ NE +G
Sbjct: 548 LISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESSG 587
>gi|209878111|ref|XP_002140497.1| poly(A) polymerase protein [Cryptosporidium muris RN66]
gi|209556103|gb|EEA06148.1| poly(A) polymerase protein, putative [Cryptosporidium muris RN66]
Length = 647
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 177/429 (41%), Positives = 261/429 (60%), Gaps = 27/429 (6%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + V G+DIDTLC+ PRH TR+ FF L + +T++ PVPDA+ P++K
Sbjct: 104 FGSYRLGVVAAGSDIDTLCIVPRHITRD-SFFTFFLAKLQQDIHITKIQPVPDAYTPIIK 162
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
+ G+ +DLL+A L+L IP DL+ D +L+N DE+T RSLNGCRV D IL+LVP +
Sbjct: 163 MVYYGIEMDLLFACLNLSRIPSDLNTLDDDLLRNVDEKTARSLNGCRVNDMILQLVPNKE 222
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
+FRT LR ++ W+K RG+YSNV G+LGGI+WA+L ARICQLYPN+ P+ +++RFF VY
Sbjct: 223 SFRTALRFVKHWSKSRGIYSNVLGYLGGISWAILTARICQLYPNSAPNQIINRFFYVYKA 282
Query: 192 WRWPNPVLLCAIEE------GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
W+W NPV+LC I+E G +G +VW+P NP+D+ HLMPIITPA+P MNS++NV+ +
Sbjct: 283 WQWKNPVILCEIKEVPKNSPGLMGFRVWNPNTNPQDRAHLMPIITPAFPSMNSTHNVTQT 342
Query: 246 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNW 305
TLR++ +E QRG E+ + +E A W L+ P+ FFE +K+++++ + A + + W
Sbjct: 343 TLRVITEELQRGSELVKEIENERA--QWSDLWSPYMFFENHKHFIQVKMLANSEQAFQKW 400
Query: 306 KGWVESRLRQLTLKIERHTYNMLQCHPHPGDF--SDKSKPLY----CSYFMGLQ------ 353
GW+ES++R L K+E T+ LQ P P SD K + C Y +GL
Sbjct: 401 TGWIESKIRFLVRKLE--TFKGLQVRPWPKVIQESDNQKDGFQFAQCMY-IGLVLCTTSG 457
Query: 354 RKQGVPVGEGEQFDIRLTVKEFKQAVSMYT---LRKPGMQISVAHVTRRNLPNFVFPGGV 410
G G D+R + +F + + + K + + V H+ ++LP +
Sbjct: 458 NNNGKSTGITPVVDLRGAILDFVGFIMNWNEVEIYKDSIDLKVKHLRFKDLPKVLREQNN 517
Query: 411 RPSRPSKGT 419
SKGT
Sbjct: 518 TKVLNSKGT 526
>gi|353242336|emb|CCA73989.1| probable PAP1-poly(A) polymerase [Piriformospora indica DSM 11827]
Length = 624
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 187/482 (38%), Positives = 269/482 (55%), Gaps = 58/482 (12%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VHGPG+DIDTL V P+H R+ DF +L + V E +PVPDA+VPV+
Sbjct: 88 FGSYRLGVHGPGSDIDTLVVAPKHVDRQ-DFMEIFLDLLQKDDWVEEANPVPDAYVPVID 146
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
K G+S+D +ARL+L VIP+DL++ DS+L+N D++ VRSLNG R TD ILRLVP +
Sbjct: 147 AKIKGISMDFTFARLALSVIPDDLELGDDSLLKNLDDKCVRSLNGSRSTDAILRLVPNVH 206
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
FR LR +++WA+RR +YSNV+GFLGGI WALLVAR+CQLYPN + +V RFF + +
Sbjct: 207 VFRDALRAIKYWAQRRAIYSNVSGFLGGIAWALLVARVCQLYPNGNAATIVRRFFLIMSM 266
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WP PV+L IEEG+L ++VW+P+ P D+ H MPIITPAYP M S++NV T I+
Sbjct: 267 WKWPQPVVLKKIEEGNLNMRVWNPKIYPSDRAHKMPIITPAYPSMCSTHNVMNCTFEIIQ 326
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
+E +RG E+ + EA W LF TFF Y+ YL+I S ++ + + W VES
Sbjct: 327 EELKRGQELIVRITNGEA--KWADLFTKHTFFSQYQYYLQIIASCDDEEIQKKWSKTVES 384
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFS----------------------------DKSKP 343
+ RQL K+E + + + HP F+ +++K
Sbjct: 385 KGRQLVGKLE-ESGTLARVHPFVKGFNKTYYTVTMQEHADIVLGNVPPAVANRTEEEAKQ 443
Query: 344 L---------YCSYFMGLQRKQGVP---VGEGEQFDIRLTVKEF-KQAVSMYTLRKPGMQ 390
+ ++++G++ + P + DI + EF K A S + M
Sbjct: 444 IESNERQVIHTTTFYIGMEITRPPPSVTTTGPRKLDISIPTSEFMKTARSWELYQNDIMG 503
Query: 391 ISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTK---PGADDGRKRKQT 447
I+V H+ LP+ VF G RP R+ L+R S GA ++R+ +
Sbjct: 504 IAVRHIKNSALPDEVFEGAPRP----------RKGLKRVAKSKVPIDGEGAQATKRRRPS 553
Query: 448 DD 449
DD
Sbjct: 554 DD 555
>gi|365991615|ref|XP_003672636.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
gi|343771412|emb|CCD27393.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 157/314 (50%), Positives = 220/314 (70%), Gaps = 4/314 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTL V P+H TRE DFF +L E PE+ E+ PVPDA VP
Sbjct: 84 VFTFGSYRLGVHGPGSDIDTLIVVPKHVTRE-DFFTVFDSLLRERPELEEIAPVPDAFVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K KFSG+SIDLL ARL + +P +L +S ++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 143 VIKVKFSGISIDLLCARLDIAQVPLNLTLSDKNLLRNLDEKELRALNGTRVTDEILELVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K FR TLR ++ WA+RR +Y+NV GF GG+ WA+LVARICQLYPNA +++++RFF++
Sbjct: 203 KPNVFRITLRAIKLWAQRRAIYANVFGFPGGVAWAMLVARICQLYPNACSAVVLNRFFKI 262
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W+WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP M +++N++ ST
Sbjct: 263 FSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKT 322
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKG 307
I++ EF RG ++ + N+ +W LF+ TFF YK YL I S D+ W G
Sbjct: 323 IILKEFARGVQVTNDIFSNKG--NWGDLFKKHTFFYEYKFYLTITASTRGTDEEHLKWSG 380
Query: 308 WVESRLRQLTLKIE 321
VES+LR L LK+E
Sbjct: 381 LVESKLRLLILKLE 394
>gi|37595378|gb|AAQ94575.1| polyA polymerase alpha [Danio rerio]
Length = 386
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 204/294 (69%), Gaps = 7/294 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF ++ L E EV +L V +A VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEKLKEQEEVKDLRAVEEAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNAV + LV +FF V
Sbjct: 215 NIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL E+ +L L VWDPR P D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 275 FSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRA 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR----IDISAEN 298
IM++EF+RG I + + +N+A DW LFE FF+ YK L +D EN
Sbjct: 335 IMVEEFKRGLAITDEILQNKA--DWSKLFEAPNFFQKYKYVLSCISLLDTHGEN 386
>gi|312067061|ref|XP_003136565.1| hypothetical protein LOAG_00977 [Loa loa]
gi|307768265|gb|EFO27499.1| hypothetical protein LOAG_00977 [Loa loa]
Length = 859
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 178/412 (43%), Positives = 252/412 (61%), Gaps = 31/412 (7%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + +VH GADID+LCV PRH R DFF ++ML E P TEL V +A VP
Sbjct: 230 LFTFGSYRLNVHTRGADIDSLCVAPRHVDRN-DFFTSFYEMLAEDPNTTELRQVQEAFVP 288
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K K+ G+ +D+L+ARL+L +PED ++ DSIL+N DE++VRSLNGCRV D+ILRLVP
Sbjct: 289 VIKLKYYGIEMDILFARLALPRVPEDQQLNDDSILRNLDEKSVRSLNGCRVADEILRLVP 348
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ NF LR ++ WAK G+YSNV G+LGG++WA+LVAR CQLYPN P+ LV +FF +
Sbjct: 349 NVSNFTYALRAIKLWAKNHGIYSNVLGYLGGVSWAILVARTCQLYPNTGPARLVQKFFLL 408
Query: 189 YTQWRWPNPVLLCAIEEG------SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 242
YT+W WP+PV+L E +L VWDPR D++HLMPI+TPA+P NS++NV
Sbjct: 409 YTKWEWPHPVVLKETEVSHARDMPALQELVWDPRSRSGDRFHLMPIVTPAFPQQNSTFNV 468
Query: 243 STSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR-IDISAENADD 301
+ S+L+I+M+E + G + K +A +W LFE FF YK++L + +SA D+
Sbjct: 469 TKSSLKIIMNEIEEGLVTINDIMKGKA--EWSALFEEVNFFSRYKHFLALLCLSATEQDE 526
Query: 302 LRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS----------YFMG 351
L W G VES++R L +ER ++ CH H + ++ PL +F+G
Sbjct: 527 LV-WCGLVESKIRFLIASLERRE-SIRVCHVHTKYYQPRNDPLPVQVSLQNPRCRLWFIG 584
Query: 352 LQRKQGVPVGEGEQFDIRLTVKEFKQAV-SMYTLRK---PGMQISVAHVTRR 399
L + V + DI+ V+ F + SM T + GM + + H R+
Sbjct: 585 LDLNKTV----SRKIDIQHEVQSFMDLLNSMATTQNIYVEGMSV-IPHYLRK 631
>gi|50925416|gb|AAH79525.1| Papolb protein [Danio rerio]
Length = 435
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 157/282 (55%), Positives = 200/282 (70%), Gaps = 3/282 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF ++ L E EV +L V +A VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEKLKEQEEVKDLRAVEEAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNAV + LV +FF V
Sbjct: 215 NIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL E+ +L L VWDPR P D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 275 FSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRA 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 290
IM++EF+RG I + + +N+A DW LFE FF+ YK L
Sbjct: 335 IMVEEFKRGLAITDEILQNKA--DWSKLFEAPNFFQKYKYVL 374
>gi|38541302|gb|AAH62850.1| Papolb protein [Danio rerio]
Length = 436
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 157/282 (55%), Positives = 200/282 (70%), Gaps = 3/282 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF ++ L E EV +L V +A VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEKLKEQEEVKDLRAVEEAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNAV + LV +FF V
Sbjct: 215 NIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL E+ +L L VWDPR P D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 275 FSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRA 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 290
IM++EF+RG I + + +N+A DW LFE FF+ YK L
Sbjct: 335 IMVEEFKRGLAITDEILQNKA--DWSKLFEAPNFFQKYKYVL 374
>gi|430811842|emb|CCJ30698.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 639
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 167/378 (44%), Positives = 248/378 (65%), Gaps = 15/378 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+ PG+DIDTL V PRH TRE +FF + Q+L PEVT + VPDA+VP
Sbjct: 139 IFTYGSYRLGVYSPGSDIDTLMVVPRHVTRE-NFFTDFEQILRNRPEVTGITAVPDAYVP 197
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++KFKFSG+ IDL++ARL+L +P DL + +++L+N +E+ V SLNG RVTD+ILRLVP
Sbjct: 198 IIKFKFSGIPIDLIFARLALAQVPMDLTLEDNNLLKNVEERCVLSLNGTRVTDEILRLVP 257
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
F+ LR ++ WA++R +YSNV GF GG+ WA+LVARICQLYPNAV ++++++FFR+
Sbjct: 258 NPTIFKHALRAIKLWAQQRAIYSNVMGFPGGVAWAMLVARICQLYPNAVSAVVIAKFFRI 317
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+QW+WP PVLL IE+G L ++VW+P+ D+ H MPIITPAYP M S++N++ ST +
Sbjct: 318 LSQWKWPQPVLLKPIEDGPLQVRVWNPKIYKGDQAHRMPIITPAYPSMCSTHNITESTQK 377
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
++++E R +I + + + W TLF TFF YK YL I ++++A+ W G
Sbjct: 378 VIINEMNRAGDIADKIL--NGTLPWSTLFAKHTFFHQYKYYLVIVAASKSAEMQLKWSGL 435
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGE-----G 363
VES++RQL L++E + + HP F+ + L+ Y + GV GE
Sbjct: 436 VESKVRQLVLRLE-YVDEIKLAHP----FNKSTDSLH--YCKTEEEANGVAHGELVSTRM 488
Query: 364 EQFDIRLTVKEFKQAVSM 381
E +++ T+KE + +M
Sbjct: 489 ENINMQQTIKEMESTSNM 506
>gi|302684083|ref|XP_003031722.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
gi|300105415|gb|EFI96819.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
Length = 558
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 176/424 (41%), Positives = 251/424 (59%), Gaps = 29/424 (6%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCV P+H R+E FF ML E P +TE+ VPDA VP
Sbjct: 83 IFTFGSYRLGVHGPGSDIDTLCVVPKHVNRDE-FFSVFEPMLREEPNITEVSGVPDAFVP 141
Query: 69 VMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
++K K G+ +DLL AR+ L IP+DL + + +L+N DE+ ++SL G R+ D+IL L+
Sbjct: 142 IIKIKMMGIPLDLLMARMVQLSSIPDDLSLQNNELLRNLDERCIKSLGGSRLVDEILSLI 201
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P Q FR LRC++ WA+RR +YSN+ GFLGG+ WA+LVARICQLYPNAV +V RFF
Sbjct: 202 PNHQVFRDALRCIKLWAQRRAIYSNINGFLGGVAWAMLVARICQLYPNAVAGTIVRRFFG 261
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
+ +W+WP PVLL IEEG L +++W+P+ P D+ H MPIITP+YP MNS++NVS ST
Sbjct: 262 IMWRWQWPQPVLLKQIEEGPLEVRIWNPQVYPSDRAHRMPIITPSYPSMNSTHNVSYSTQ 321
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
+M+ EF+RG +I ++K EA W LF TFF +++YL+I SA++ W+
Sbjct: 322 TVMIHEFKRGLDIVGQIQKGEA--SWADLFNKHTFFTDFRHYLQIVASADDQHSHDKWQL 379
Query: 308 WV-----ESRLRQLTLKIERHTYNMLQC-------HPHPGDFS-----------DKSKPL 344
+ E + Q+T + + C G FS DK+ +
Sbjct: 380 VLRLDAQEGSIIQVTRPFIKGFERIYHCISDDERRAATEGRFSDLKAAEGRPAGDKTTTV 439
Query: 345 YCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLP 402
Y + +F+GL+ K Q +I EF V + T + M+++V H+ R LP
Sbjct: 440 YTTAFFLGLEFKPKDGNSGTRQLNISFPTGEFCNLVKKWETYDETKMRVNVRHIKRSELP 499
Query: 403 NFVF 406
FV+
Sbjct: 500 EFVY 503
>gi|156082541|ref|XP_001608755.1| poly(A) polymerase PAP [Babesia bovis T2Bo]
gi|154796004|gb|EDO05187.1| poly(A) polymerase PAP, putative [Babesia bovis]
Length = 512
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 161/413 (38%), Positives = 250/413 (60%), Gaps = 15/413 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L+ G + + P +DID LC+ P+ TRE FF + + L +P +T+LH VPDA+ P
Sbjct: 91 LLTFGSYRLGIVAPNSDIDCLCLCPQSVTRES-FFTDFYNALKLLPNITKLHAVPDAYTP 149
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K + G+ IDLL+A L +PE++D+ D+IL+N +E T RS+NGCRV IL VP
Sbjct: 150 VIKLIYDGIDIDLLFANLPAQTVPEEIDVLDDAILRNMNEATARSINGCRVAALILASVP 209
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
NFRTTLR ++ WA RRG+Y+ V ++GG+ WA+L AR+CQLYPN +P+ L+ +FFRV
Sbjct: 210 NKDNFRTTLRYVKLWANRRGLYTTVMAYMGGVAWAILTARVCQLYPNFLPNQLIQKFFRV 269
Query: 189 YTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
Y QW W PV+LC I+E G + +VWDPR NP D+ HLMP+ITPA+P MNS++N++
Sbjct: 270 YAQWNWKCPVMLCKIKEVPNIPGYMSFKVWDPRNNPTDRQHLMPVITPAFPSMNSTHNIT 329
Query: 244 TSTLRIMMDEFQRGHEICEAMEKN-EADVDWDTLFEPFTFFEAYKNYLRIDISAENADDL 302
+T RI+ DEF+R +++ + K + W+ + E F ++K++L I++ A
Sbjct: 330 LTTKRILTDEFKRANDLLKVNAKGAQMKNIWERVLEKEDMFASHKHFLVIEVLATTEHVH 389
Query: 303 RNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQ-----G 357
W+GW+ SR+R L KIE +++ P + K F G + K+
Sbjct: 390 GKWEGWIGSRMRFLIKKIETVPNILVRPWPEFFKYEHKEWDYASCVFFGFKCKEPDNKTN 449
Query: 358 VPVGEGEQFDIRLTVKEFKQAVSMYT---LRKPGMQISVAHVTRRNLPNFVFP 407
+ FD+R+++K FK+ ++ +T K + +++ ++ LP+FV P
Sbjct: 450 SAEPANKTFDMRMSIKGFKEIINSWTEMEAYKDQIAVNIRYLKNSQLPHFVNP 502
>gi|159154998|gb|AAI54504.1| Papolb protein [Danio rerio]
Length = 436
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 157/282 (55%), Positives = 200/282 (70%), Gaps = 3/282 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF ++ L E EV +L V +A VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEKLKEQEEVKDLRAVEEAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNAV + LV +FF V
Sbjct: 215 NIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL E+ +L L VWDPR P D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 275 FSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRA 334
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 290
IM++EF+RG I + + +N+A DW LFE FF+ YK L
Sbjct: 335 IMVEEFKRGLAITDEILQNKA--DWSKLFEAPNFFQKYKYVL 374
>gi|58258863|ref|XP_566844.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222981|gb|AAW41025.1| polynucleotide adenylyltransferase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 642
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 184/443 (41%), Positives = 252/443 (56%), Gaps = 48/443 (10%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VHGPG+DIDT+CV PRH RE FFGE ML P VTE+ V A VPVMK
Sbjct: 91 GSYRLGVHGPGSDIDTICVCPRHIYREH-FFGEFQDMLRAWPAVTEISAVESAFVPVMKT 149
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
SGV +DLL+AR++L + LDI +D IL+ D+ + RSLNG RVTD IL LVP +
Sbjct: 150 VISGVEVDLLFARVNLPEAGDSLDIEKDEILRGVDDASQRSLNGPRVTDMILNLVPDVAT 209
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FRT LR +R WAKRRG+YSNV GF GG+ WALL ARICQLYP A P+ +V +FF +Y QW
Sbjct: 210 FRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTARICQLYPAAAPATIVGKFFPIYYQW 269
Query: 193 RWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIM 250
WP PVLL I+ G +Q VW+P+ + +D+ H MP+ITPAYP M S++N+++ST+ I+
Sbjct: 270 SWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAYPSMCSTHNITSSTMSII 329
Query: 251 MDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVE 310
E R +I + + K D W LFE FF YK Y+++ SA +D +++W G VE
Sbjct: 330 RKEMLRAMQITDEILKT-PDSSWIPLFEKVDFFSMYKTYVQVVASASTSDGIKDWSGMVE 388
Query: 311 SRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC------------------------ 346
SR+R L +E +T ++ HP G ++ YC
Sbjct: 389 SRIRTLVGDLE-NTDCIITAHPQVGGV---NRVFYCLTEEEQAAASQGELTAEMIDRTEE 444
Query: 347 -------------SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISV 393
S+F+GL+ ++ G ++ K+F AV + M++SV
Sbjct: 445 DVKNREHRKIYTKSFFIGLEIEKKSKETGGRVLNLFYPSKKF-CAVCQNWDKYNEMEMSV 503
Query: 394 A--HVTRRNLPNFVFPGGVRPSR 414
R LP++VFP G+ S+
Sbjct: 504 ILRPAKRSELPSYVFPDGMPKSK 526
>gi|19112154|ref|NP_595362.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe 972h-]
gi|26397523|sp|Q10295.1|PAP_SCHPO RecName: Full=Poly(A) polymerase pla1; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|1419256|emb|CAA56141.1| polymerase [Schizosaccharomyces pombe]
gi|4160340|emb|CAA22808.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe]
Length = 566
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 154/313 (49%), Positives = 220/313 (70%), Gaps = 3/313 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+GPG+DIDTL V P+H +R+ +FF +L ML E EVT+L VPDA+VP
Sbjct: 83 IFTYGSYRLGVYGPGSDIDTLVVVPKHVSRD-NFFQDLEPMLREREEVTDLAAVPDAYVP 141
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++KFKF G+SIDL++ARLS+ +P DL++S +++L+ +E+ V SLNG RVTDQIL+LVP
Sbjct: 142 IIKFKFLGISIDLIFARLSVPRVPRDLELSDNNLLKGVEERCVLSLNGTRVTDQILQLVP 201
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
F+ LR ++FWA+RR +Y+NV GF GG+ WA++VARICQLYPNAV S++V++FFR+
Sbjct: 202 NRAVFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVARICQLYPNAVSSVIVAKFFRI 261
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QW WP P+LL IE+G L +++W+P+ P DK H MPIITPAYP M +++N++ ST
Sbjct: 262 LHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMPIITPAYPSMCATHNITLSTQT 321
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
I++ E R EI + + + W LF+ FF YK+YL I +A+ A+ W G
Sbjct: 322 IILREMVRAGEIADQIMVKA--LPWSALFQKHDFFHRYKHYLTITAAAKTAEAQLKWAGL 379
Query: 309 VESRLRQLTLKIE 321
VES+LR L ++E
Sbjct: 380 VESKLRHLVTRLE 392
>gi|241955483|ref|XP_002420462.1| poly(A) polymerase, putative; polynucleotide adenylyltransferase,
putative [Candida dubliniensis CD36]
gi|223643804|emb|CAX41541.1| poly(A) polymerase, putative [Candida dubliniensis CD36]
Length = 558
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 154/328 (46%), Positives = 228/328 (69%), Gaps = 5/328 (1%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + V+GPG+DIDTL V P+H TR+ DFF ++ + PE+ E+ VPDA+VP++K
Sbjct: 86 FGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFSVFADIIRKRPELEEIACVPDAYVPIIK 144
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
+F G+SIDL+ A+L++ +P DL + ++L+N DE+ +RSLNG RVTD+IL+LVPK
Sbjct: 145 IEFDGISIDLIMAKLNIPRVPLDLTLDDKNLLKNLDEKDLRSLNGTRVTDEILQLVPKPT 204
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
F+ LRC++ WA++R VY N+ GF GG+ WA+LVARICQLYPNAV S++V +FF +YT+
Sbjct: 205 VFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSSVIVEKFFNIYTK 264
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W WP PVLL +IE+G L ++VW+PR P D+ H MP+ITPAYP M +++N+++ST ++++
Sbjct: 265 WNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCATHNITSSTQKVIL 324
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-RIDISAENADDLRNWKGWVE 310
E RG I + + + W LFE FF YK YL + + ++A++ + W G++E
Sbjct: 325 AELSRGSSIMQDIHAGKK--SWSDLFEKHCFFYKYKFYLCVVAATIDSAEEHKKWSGFIE 382
Query: 311 SRLRQLTLKIERHTYNMLQCHPHPGDFS 338
S+LRQL LK+E + HP+ DFS
Sbjct: 383 SKLRQLVLKLEV-AEGVEIAHPYVKDFS 409
>gi|170593997|ref|XP_001901750.1| Poly polymerase central domain containing protein [Brugia malayi]
gi|158590694|gb|EDP29309.1| Poly polymerase central domain containing protein [Brugia malayi]
Length = 842
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/384 (44%), Positives = 237/384 (61%), Gaps = 26/384 (6%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + +VH GADID+LCV PRH R DFF ++ML E P TEL V +A VP
Sbjct: 226 LFTFGSYRLNVHTRGADIDSLCVAPRHVDRN-DFFTSFYEMLAEDPNTTELRQVQEAFVP 284
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K K+ G+ +D+L+ARL+L +PED ++ DSIL+N DE++VRSLNGCRV D+ILRLVP
Sbjct: 285 VIKLKYYGIEMDILFARLALPRVPEDQQLNDDSILRNLDEKSVRSLNGCRVADEILRLVP 344
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NF LR ++ WAK G+YSNV G+LGG++WA+LVAR CQLYPN P+ LV +FF +
Sbjct: 345 NISNFTYALRAIKLWAKNHGIYSNVLGYLGGVSWAILVARTCQLYPNTGPARLVQKFFLL 404
Query: 189 YTQWRWPNPVLLCAIEEG------SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 242
YT+W WP+PV+L E SL VWDPR D++HLMPI+TPA+P NS++NV
Sbjct: 405 YTKWEWPHPVVLKETEISHARDMPSLQELVWDPRSRSGDRFHLMPIVTPAFPQQNSTFNV 464
Query: 243 STSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR-IDISAENADD 301
+ S+L+I+M+E + G + K + W LFE FF YK++L + +SA D+
Sbjct: 465 TKSSLKIIMNEIEEGLVTINDIMKGKT--GWSALFEEVNFFSRYKHFLALLCLSATEQDE 522
Query: 302 LRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS----------YFMG 351
L W G VES++R L +ER ++ CH H + ++ P +F+G
Sbjct: 523 LV-WCGLVESKIRFLIASLERRE-SIRVCHVHTKYYQPRNDPFPVQVSLQNPRCRLWFIG 580
Query: 352 LQRKQGVPVGEGEQFDIRLTVKEF 375
L + V + DI+ V+ F
Sbjct: 581 LDLNKTV----SRKIDIQHEVQSF 600
>gi|260941482|ref|XP_002614907.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
gi|238851330|gb|EEQ40794.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
Length = 557
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 160/330 (48%), Positives = 226/330 (68%), Gaps = 7/330 (2%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + V+GPG+DIDTL V P+H RE DFF Q++ + PE+ E+ VPDA VP++K
Sbjct: 86 FGSYRLGVYGPGSDIDTLVVVPKHVGRE-DFFTVFEQIIRKRPELEEITSVPDAFVPIIK 144
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
+F G+SIDL+Y+RL++ +P D+ + ++L+N DE+ +RSLNG RVTD+IL+LVPK
Sbjct: 145 IEFDGISIDLIYSRLNVPRVPLDMTLEDKNLLKNIDEKDLRSLNGTRVTDEILQLVPKPT 204
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
F+ LRC++ WA++R VY NV GF GG+ WA+L ARICQLYPNAV + +V +FF +YT+
Sbjct: 205 VFKHALRCIKMWAQQRAVYGNVFGFPGGVAWAMLTARICQLYPNAVGATIVEKFFTIYTK 264
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W WP PVLL IE+G L ++VW+PR P D+ H MP+ITPAYP M +++N+++ST +++M
Sbjct: 265 WNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRQHRMPVITPAYPSMCATHNITSSTQKVIM 324
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRN--WKGWV 309
E +RG EI + E W LFE +FF YK YL I ++A ADD + W G +
Sbjct: 325 KELERGAEIMSLVASGEK--TWADLFERHSFFHDYKFYLCI-VAATLADDEEHHKWSGMI 381
Query: 310 ESRLRQLTLKIERHTYNMLQCHPHPGDFSD 339
ES+LR L K+E T + HP+ DFS+
Sbjct: 382 ESKLRILVQKLEV-TDGIALAHPYVKDFSN 410
>gi|66357032|ref|XP_625694.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
gi|46226666|gb|EAK87645.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
Length = 699
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 156/338 (46%), Positives = 228/338 (67%), Gaps = 11/338 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V G+DIDTLC+ PRH +RE FF L + VT++ PVPDA+ P
Sbjct: 97 IFTFGSYRLGVVAAGSDIDTLCIAPRHISRE-SFFSFFLAKLQQDINVTKVQPVPDAYTP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K + G+ +DLL+A L+L IP DL+ D +L+N D++T RSLNGCRV D IL+LVP
Sbjct: 156 IIKMVYHGMEMDLLFACLNLSRIPNDLNTLDDDLLKNVDDKTARSLNGCRVNDMILQLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
++FRT LR ++ W+K RG+YSNV G+LGGI+WA+L ARICQLYPNA PS +++RFF +
Sbjct: 216 NKESFRTALRFVKHWSKARGIYSNVLGYLGGISWAILTARICQLYPNAAPSQIINRFFYI 275
Query: 189 YTQWRWPNPVLLCAIEE------GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 242
Y W+W NPV+LC I+E G +G +VW+P NP+D+ H+MPIITPA+P MNS++NV
Sbjct: 276 YKTWQWKNPVILCEIKEVPKNTPGLMGFRVWNPNLNPQDRAHVMPIITPAFPSMNSTHNV 335
Query: 243 STSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDL 302
+ +TL ++ DE QR + I + +E ++A W ++ PF FFE +K+++++ + + N
Sbjct: 336 THTTLGVITDELQRAYRIIQDIENDKA--TWHDVWSPFLFFEKHKHFIQVKMLSNNEQAF 393
Query: 303 RNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 340
W GW+ES+LR L K+E T+ LQ P P ++
Sbjct: 394 HKWIGWIESKLRFLVRKLE--TFKGLQVRPWPKAIQEQ 429
>gi|308478522|ref|XP_003101472.1| CRE-PAP-1 protein [Caenorhabditis remanei]
gi|308263118|gb|EFP07071.1| CRE-PAP-1 protein [Caenorhabditis remanei]
Length = 639
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 169/388 (43%), Positives = 244/388 (62%), Gaps = 25/388 (6%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + VH GADIDTL V PRH R DFF +ML++ P VTELH V +A VP
Sbjct: 86 LFTFGSYRLGVHSSGADIDTLAVVPRHIDRT-DFFTSFKEMLSQDPNVTELHAVEEAFVP 144
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VMK K+SGV +D+L+ARL+L +P+ ++S DS+L+N D+++VRSLNGCRV +Q+L+LVP
Sbjct: 145 VMKLKYSGVELDILFARLALKEVPDTQELSDDSLLKNLDQESVRSLNGCRVAEQLLKLVP 204
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ N+ LR ++ WAK G+YSN GF GGI+WA+L+AR CQLYPNA PS LV R F +
Sbjct: 205 RQNNYCVALRAIKLWAKNHGIYSNSMGFFGGISWAILIARACQLYPNASPSRLVHRMFFI 264
Query: 189 YTQWRWPNPVLLCAI-----EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
+ W WP+PVLL + + G+L VWDPRR D++HLMPIITPA+P NS++NV+
Sbjct: 265 FATWTWPHPVLLNELNSERTDVGALIDLVWDPRRKSTDRFHLMPIITPAFPQQNSTHNVT 324
Query: 244 TSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR 303
ST++++ E G EIC + +E WD LF+ FF YK+Y+ + ++A N ++
Sbjct: 325 RSTMQVIRTEICEGLEICRDI--SEGKCGWDALFKEVNFFSRYKHYIALLMAAPNEEEEL 382
Query: 304 NWKGWVESRLRQLTLKIERHTYNMLQCHPHPG----------DFSDKSKPLYCSYFMGLQ 353
N+ G++ESR+R L +ER+ +++ H P D S ++K + +F+GL+
Sbjct: 383 NYGGFLESRIRLLVQSLERNQ-DIVIAHNDPNKHKPSPNAKFDVSPENKRITL-WFIGLE 440
Query: 354 RKQGVPVGEGEQFDIRLTVKEFKQAVSM 381
V + D+ + FK V +
Sbjct: 441 F-----VEHTKSLDLTSEIHRFKTNVEL 463
>gi|255732153|ref|XP_002551000.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
gi|240131286|gb|EER30846.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
Length = 558
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 155/331 (46%), Positives = 228/331 (68%), Gaps = 5/331 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+GPG+DIDTL V P+H TR+ DFF ++ + PE+ E+ VPDA VP
Sbjct: 84 VFTFGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFSVFPDIIRKRPELEEIACVPDAFVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +F G+SIDL+ ARL++ +P ++ + ++L+N DE+ +RSLNG RVTD+IL+LVP
Sbjct: 143 IIKLEFDGISIDLIMARLNVPRVPLEMTLDDKNLLKNLDEKDLRSLNGTRVTDEILQLVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K F+ LRC++ WA++R VY NV GF GG+ WA+LVARICQLYPNAV +++V +FF +
Sbjct: 203 KPTVFKHALRCIKLWAQQRAVYGNVYGFPGGVAWAMLVARICQLYPNAVSAVIVEKFFSI 262
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
YT+W WP PVLL +IE+G L ++VW+PR P D+ H MP+ITPAYP M +++N+++ST +
Sbjct: 263 YTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCATHNITSSTQK 322
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-RIDISAENADDLRNWKG 307
+++ E RG I + N + W LF+ +F AYK YL + + + ++ + W G
Sbjct: 323 VILKELSRGSSIMNDI--NTGNKTWSDLFKRHEYFHAYKFYLCVVAATVDTSEQHKKWSG 380
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFS 338
+VESRLRQL LK+E T + HP+ DFS
Sbjct: 381 FVESRLRQLVLKLEV-TDGIEFAHPYVKDFS 410
>gi|17533995|ref|NP_496524.1| Protein F43G6.5 [Caenorhabditis elegans]
gi|5832750|emb|CAA90398.2| Protein F43G6.5 [Caenorhabditis elegans]
Length = 554
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 167/376 (44%), Positives = 238/376 (63%), Gaps = 14/376 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L+ G + VH GADIDTL + PRHATR DFF QML + PEVT L V +A VP
Sbjct: 95 LMAFGSYRLGVHSSGADIDTLVLAPRHATRA-DFFSSFKQMLAKDPEVTNLCAVENAFVP 153
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+M K+SG+ ID L+ARL+L +PEDLDI D++L+N D+++VRSLNGCRV + +L+LVP
Sbjct: 154 IMTMKYSGIEIDFLFARLALKEVPEDLDILDDALLKNLDQESVRSLNGCRVAENLLKLVP 213
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+NF TLR ++ WAK G+YSN GF GGI WA+LVAR CQLYPNA PS L+ + F +
Sbjct: 214 NQENFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQLYPNASPSKLIQKVFFI 273
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQ-----VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
++ W+WP PVLL I + L VWDPRRN D+YHLMPI+TPA+P NS++NVS
Sbjct: 274 FSTWKWPAPVLLDFISSDRMDLAQLNQLVWDPRRNQSDRYHLMPIVTPAFPQQNSTHNVS 333
Query: 244 TSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR 303
S+++++ +E + C+ ++ +W L E FF YK+++ + ++AE D
Sbjct: 334 RSSMKVIQEEMKDALITCDNIQ--NGSCNWMDLLEEINFFSRYKHFISLSMTAETEKDEL 391
Query: 304 NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
+ G+ ESR+RQL L +E++ L H +P F P +F+GLQ + V
Sbjct: 392 AFGGFFESRIRQLVLILEKNQGIKL-AHINPKKFKAAKDPKKSVWFIGLQFDENV----- 445
Query: 364 EQFDIRLTVKEFKQAV 379
+ D+ +++FK+ +
Sbjct: 446 KNLDLTKDIQQFKRNI 461
>gi|358059327|dbj|GAA94903.1| hypothetical protein E5Q_01558 [Mixia osmundae IAM 14324]
Length = 618
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 177/439 (40%), Positives = 253/439 (57%), Gaps = 41/439 (9%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPGADIDTLCV P + R DFF ML E +V ++ +P+A+VP
Sbjct: 84 IFTFGSYRLGVHGPGADIDTLCVVPVYVERA-DFFTIFLDMLRERDDVRDITDIPEAYVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K KF+ V IDL +AR++ +P+DL++ D++L+ DE+ VRSLNG RVTDQILRLVP
Sbjct: 143 LIKVKFTNVEIDLTFARINRPTVPDDLELGDDNLLKQLDERDVRSLNGSRVTDQILRLVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I FR +LR +++WAKRR VY+NV GF GG++WA+LVARICQLYPN P ++SRFF +
Sbjct: 203 NIPVFRDSLRAIKYWAKRRAVYANVVGFPGGVSWAMLVARICQLYPNECPGGILSRFFHI 262
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+ W+WP PVLL +++G L ++VW+P N D+ H MP+ITPAYP M S++N+S S++
Sbjct: 263 FLLWQWPEPVLLTPLKQGPLNVRVWNPHVNSADRMHKMPVITPAYPSMCSTHNISHSSMA 322
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
++ E++RG I + + W LFEP FF Y+ YL+I S+++ D+ W G
Sbjct: 323 VIKAEWERGENIVNRIAVGQT--TWAELFEPTDFFYKYRYYLQITASSQDMDNQLKWSGT 380
Query: 309 VESRLRQLTLKIE-------RHTY-----NMLQCHPHP---------------------- 334
VES+LR L +E H Y C
Sbjct: 381 VESKLRTLGANLEGAEGVTLAHIYVDEFEKTYSCKTEEEVKLVASGASTPEISARTEDDI 440
Query: 335 GDFSDKSKPLYCSYFMGLQRKQGVPVGEG-EQFDIRLTVKEFKQAVSMYTLRKPGMQISV 393
D K ++++GL G P G G ++ D+ EF + V + P M I+V
Sbjct: 441 KDVEGAVKLHTSNFYIGLSIDLG-PKGSGSKKLDLSYPTCEFTKLVKRWEKYTPEMGITV 499
Query: 394 AHVTRRNLPNFVFPGGVRP 412
++ LP+FVF G RP
Sbjct: 500 RYMKNIALPDFVF--GDRP 516
>gi|320038983|gb|EFW20918.1| Poly(A) polymerase [Coccidioides posadasii str. Silveira]
Length = 590
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 175/432 (40%), Positives = 254/432 (58%), Gaps = 32/432 (7%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL VGP+H E DFF + L + + +L PVPDA+VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLVVGPKHVAIE-DFFLDFPPTLERLAPKDSIEKLTPVPDAYVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + SG+SIDL++ARL + IP DLD+ +L+ DE+ +R +NG RVTD+IL LVP+
Sbjct: 149 IKLELSGISIDLIFARLIVHSIPPDLDLRNKELLRGLDEREIRCVNGTRVTDEILELVPE 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+ R +YSNV GF GG+ WA+LVAR+CQLYP A S++V +FFR+
Sbjct: 209 KKTFRLALRAIKLWAQSRAIYSNVVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++NVS ST +
Sbjct: 269 NYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSLSTKAV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRNWKGW 308
++ E +RG +I E + + + W LF TFF YK YL I S+ + + W G
Sbjct: 329 ILRELKRGGDIVEKIFLGQ--LRWSDLFAKHTFFSKDYKYYLNITASSTSKEAQSVWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPG---------------------DFSDKSKPLYCS 347
VE++LR L + +++ ++ HP P + S+ +
Sbjct: 387 VEAKLRHLVIALDKKA-SIEVAHPFPKAHVAALESANGSINMPGLGQTEESNNHTLHTTT 445
Query: 348 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF 406
Y++GL+ K VP G DI FK + + +PG+ +++ HV +LP VF
Sbjct: 446 YYIGLELKPLVP-GASRSLDISSETHMFKNMCTSWAQYQPGINDLTITHVRNYDLPEDVF 504
Query: 407 -PGGVRPSRPSK 417
PG RP RP K
Sbjct: 505 HPGETRPVRPKK 516
>gi|321249627|ref|XP_003191515.1| polynucleotide adenylyltransferase [Cryptococcus gattii WM276]
gi|317457982|gb|ADV19728.1| Polynucleotide adenylyltransferase, putative [Cryptococcus gattii
WM276]
Length = 644
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 183/443 (41%), Positives = 250/443 (56%), Gaps = 48/443 (10%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VHGPG+DIDT+CV PRH RE FFGE ML P VTE+ V A VPVMK
Sbjct: 91 GSYRLGVHGPGSDIDTICVCPRHIYREH-FFGEFQDMLRAWPAVTEISAVESAFVPVMKT 149
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
SGV +DLL+AR++L + LDI +D IL+ D+ + RSLNG RVTD IL LVP +
Sbjct: 150 VISGVEVDLLFARVNLPEAGDLLDIEKDEILRGVDDASQRSLNGPRVTDMILNLVPDVAT 209
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FRT LR +R WAKRRG+YSNV GF GG+ WALL ARICQLYP A P+ +V +FF +Y QW
Sbjct: 210 FRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTARICQLYPAAAPATIVGKFFPIYYQW 269
Query: 193 RWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIM 250
WP PVLL I+ G +Q VW+P+ + +D+ H MP+ITPAYP M S++N+++ST+ I+
Sbjct: 270 NWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAYPSMCSTHNITSSTMSII 329
Query: 251 MDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVE 310
E R +I + + K W LFE FF YK Y+++ SA +D +++W G VE
Sbjct: 330 RKEMLRAMQITDEILKTPGS-SWIPLFEKVDFFSMYKTYVQVVASASTSDGIKDWSGMVE 388
Query: 311 SRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC------------------------ 346
SR+R L +E +T ++ HP G ++ YC
Sbjct: 389 SRIRTLVGDLE-NTDCIITAHPQVGGV---NRVFYCLTEEEQAAASQGELTAEMIDRTEE 444
Query: 347 -------------SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISV 393
S+F+GL+ ++ G ++ K+F AV + M++SV
Sbjct: 445 DVEGKEHRKIYTKSFFIGLEIEKKSKESGGRVLNLFYPSKKF-CAVCQNWDKYNEMEMSV 503
Query: 394 A--HVTRRNLPNFVFPGGVRPSR 414
R LP +VFP G+ S+
Sbjct: 504 ILRPAKRSELPPYVFPDGMPKSK 526
>gi|213406289|ref|XP_002173916.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
gi|212001963|gb|EEB07623.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
Length = 563
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 181/492 (36%), Positives = 278/492 (56%), Gaps = 70/492 (14%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+GPG+DIDTL V P+H +RE +FF +L ML PE+T+L VP+A+VP
Sbjct: 83 IFTYGSYRLGVYGPGSDIDTLVVVPKHVSRE-NFFQDLEPMLRARPEITDLAAVPEAYVP 141
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++KFKF G+SIDL++ARLS+ +P DL++S ++L+ +E+ + SLNG RVTDQIL+LVP
Sbjct: 142 IIKFKFLGISIDLIFARLSIPRVPLDLELSDSNLLKGVEERCILSLNGTRVTDQILQLVP 201
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
F+ LR ++FWA+RR +Y+NV GF GG+ WA++VARICQLYPNAV +++VS+FFR+
Sbjct: 202 NRAVFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVARICQLYPNAVSAVIVSKFFRI 261
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+QW WP PVLL I++G L ++VW+P+ P DK H MPIITPAYP M +++N++ ST
Sbjct: 262 LSQWNWPQPVLLKPIDDGPLQVRVWNPKLYPSDKAHRMPIITPAYPSMCATHNITPSTQT 321
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+++ E R I + + + W LFE FF Y+ YL + +++ AD W G
Sbjct: 322 VILREMARAGLIVDDIMAGKK--PWSALFEKHDFFHRYRYYLTVTAASKTADSQLKWSGL 379
Query: 309 VESRLRQLTLKIE-------RHTYN-----MLQCHPH----------------------- 333
VES+LR ++E H +N + C
Sbjct: 380 VESKLRHFVTRLELVDAITLAHPFNKGFNKIYMCKTEEEAQQVANGVSTAVVAKDANLEE 439
Query: 334 -------------PGDFSDKSK-PLY-CSYFMGL--QRKQGVPVGEGEQFDIRLTVKEFK 376
GD +D+ K +Y ++++GL +RK+G + ++ DI +EF
Sbjct: 440 AAKAGDQNEHKEGEGDAADEKKFSVYTTTFYIGLEIERKKG---PQSKRLDITWPSQEFS 496
Query: 377 QAVSMY-TLRKPGMQISVAHVTRRNLPNFVF-PGGVRPSRPSKGTWDSRRALERKVSSHT 434
+ + M + + + LP+ VF PG RP P+K ++++S
Sbjct: 497 EMCKKWDKFDDTMMTVFIKNTRNYTLPDEVFEPGEERPKPPTK----------KRIASAE 546
Query: 435 KPGADDGRKRKQ 446
K +D ++Q
Sbjct: 547 KKTENDQVPKRQ 558
>gi|302846120|ref|XP_002954597.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
gi|300260016|gb|EFJ44238.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
Length = 410
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 156/319 (48%), Positives = 210/319 (65%), Gaps = 6/319 (1%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGE----LHQMLTEMPEVTELHPVPDAHV 67
G + VHGPG+D+DTL VGPR+ RE DFFG L +L++ P++T++ PVPDA V
Sbjct: 86 FGSYRLGVHGPGSDMDTLVVGPRYVLREMDFFGNEKHCLQYLLSQTPDITDIQPVPDAFV 145
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
P++ K+ GV ID+LYA L++ +PE LD+S ++L+ DE TVRSLNGCRVTD ILRLV
Sbjct: 146 PMIGIKYKGVQIDVLYASLAMVTLPEQLDLSNHAVLRGCDEATVRSLNGCRVTDTILRLV 205
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P FR LR ++ WA RG+ SNV G+LGG+N A++VA+ICQLYP A S ++ +FF
Sbjct: 206 PNQDVFRLALRAVKHWASLRGISSNVTGYLGGVNLAIMVAKICQLYPRAEASTVLLKFFI 265
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
+ W WP + L E+ S+GL VWDPR +D LMP+ITPAYP MNS YNV STL
Sbjct: 266 LLKAWPWPRAIHLRVPEDHSMGLPVWDPRPGTRDSLALMPVITPAYPAMNSLYNVQRSTL 325
Query: 248 RIMMDEFQRGHEICEAMEKNEAD--VDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNW 305
+M EF E+C + + +DWD LF P FF + Y++I++SA++ DL W
Sbjct: 326 EVMTAEFAAAAEVCTSFLRCRGGQPLDWDRLFMPVPFFTQHTFYIQIEVSADSEQDLVLW 385
Query: 306 KGWVESRLRQLTLKIERHT 324
GWV SR+R+L +E H
Sbjct: 386 DGWVSSRIRRLVRNLEDHV 404
>gi|50304345|ref|XP_452122.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641254|emb|CAH02515.1| KLLA0B13255p [Kluyveromyces lactis]
Length = 598
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 149/314 (47%), Positives = 220/314 (70%), Gaps = 4/314 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTL V P+H +RE DFF +L E PE+ E+ VPDA VP
Sbjct: 84 VFTFGSYRLGVHGPGSDIDTLIVVPKHVSRE-DFFTVFDALLRERPELEEIASVPDAFVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K KF+G+SIDL++A+L L +P L +S ++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 143 IIKIKFNGISIDLIFAKLDLPQVPISLTLSDKNLLRNVDEKDLRALNGTRVTDEILELVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+F+ LR ++ WAKRR VY+NV GF GG+ WA+ V RICQLYPNA ++++S+FF++
Sbjct: 203 NKTSFKIALRAIKIWAKRRAVYANVFGFPGGVAWAMFVVRICQLYPNACSAVIISKFFQI 262
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++W+WP PVLL IE+G L ++VW+P+ +D+ H MP+ITPAYP M +++N+S ST +
Sbjct: 263 LSRWKWPQPVLLKPIEDGPLQVRVWNPKIYAQDRSHKMPVITPAYPSMCATHNISESTKK 322
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKG 307
+++ E QRG E+ + + NE + W+ LF+ FF YK YL + +S + +D+ W G
Sbjct: 323 VILSELQRGVEVTQKIFSNE--LSWEDLFKKHDFFFKYKFYLTVMVSTKGSDEQHLKWSG 380
Query: 308 WVESRLRQLTLKIE 321
+VES+LR L K+E
Sbjct: 381 FVESKLRLLVQKLE 394
>gi|134107007|ref|XP_777816.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260514|gb|EAL23169.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 643
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 180/443 (40%), Positives = 249/443 (56%), Gaps = 47/443 (10%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VHGPG+DIDT+CV PRH RE FFGE ML P VTE+ V A VPVMK
Sbjct: 91 GSYRLGVHGPGSDIDTICVCPRHIYREH-FFGEFQDMLRAWPAVTEISAVESAFVPVMKT 149
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN-GCRVTDQILRLVPKIQ 131
SGV +DLL+AR++L + LDI +D IL+ D+ + RSLN G RVTD IL LVP +
Sbjct: 150 VISGVEVDLLFARVNLPEAGDSLDIEKDEILRGVDDASQRSLNAGPRVTDMILNLVPDVA 209
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
FRT LR +R WAKRRG+YSNV GF GG+ WALL ARICQLYP A P+ +V +FF +Y Q
Sbjct: 210 TFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTARICQLYPAAAPATIVGKFFPIYYQ 269
Query: 192 WRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
W WP PVLL I+ G +Q VW+P+ + +D+ H MP+ITPAYP M S++N+++ST+ I
Sbjct: 270 WSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAYPSMCSTHNITSSTMSI 329
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 309
+ E R +I + + K D W LFE FF YK Y+++ SA +D +++W G V
Sbjct: 330 IRKEMLRAMQITDEILKT-PDSSWIPLFEKVDFFSMYKTYVQVVASASTSDGIKDWSGMV 388
Query: 310 ESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC----------------------- 346
ESR+R L +E +T ++ HP G ++ YC
Sbjct: 389 ESRIRTLVGDLE-NTDCIITAHPQVGGV---NRVFYCLTEEEQAAASQGELTAEMIDRTE 444
Query: 347 --------------SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY-TLRKPGMQI 391
S+F+GL+ ++ G ++ K+F + + M +
Sbjct: 445 EDVKNREHRKIYTKSFFIGLEIEKKSKETGGRVLNLFYPSKKFCAVCQNWDKYNEMEMSV 504
Query: 392 SVAHVTRRNLPNFVFPGGVRPSR 414
+ R LP++VFP G+ S+
Sbjct: 505 ILRPAKRSELPSYVFPDGMPKSK 527
>gi|341899657|gb|EGT55592.1| hypothetical protein CAEBREN_22785 [Caenorhabditis brenneri]
Length = 630
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 170/414 (41%), Positives = 250/414 (60%), Gaps = 31/414 (7%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + VH GADIDTL V PRH R DFF +ML + P VTELH V +A VP
Sbjct: 88 LFTFGSYRLGVHSSGADIDTLAVVPRHIDRS-DFFTSFKEMLNQDPNVTELHAVEEAFVP 146
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VMK K+SGV +D+L+ARL+L +P++ ++S D +L+N D +++RSLNGCRV +Q+L+LVP
Sbjct: 147 VMKLKYSGVELDILFARLALREVPDNQELSDDQLLRNLDAESIRSLNGCRVAEQLLKLVP 206
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ + F T LR ++ WAK G+YSN GF GGI+WA+L+AR CQLYPNA PS LV R F +
Sbjct: 207 RQKEFCTALRAIKVWAKNHGIYSNSMGFFGGISWAILIARACQLYPNASPSKLVHRMFFI 266
Query: 189 YTQWRWPNPVLLCAIEEG-----SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
++ W WP+PVLL + +L VWDP + DK+HLMPIITPA+P NS++NV+
Sbjct: 267 FSTWTWPHPVLLKFAAKDRNDIPALCKLVWDPEKKSSDKFHLMPIITPAFPEQNSTHNVT 326
Query: 244 TSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR 303
S+ +I+ DE EICE + N+ W LFE FF YK+++ + ++A N ++
Sbjct: 327 RSSSQIIKDEIWEALEICEQI--NDGKAKWKDLFEEVNFFSRYKHFIALIMAAPNEEEEL 384
Query: 304 NWKGWVESRLRQLTLKIERHTYNMLQCHPHPG----------DFSDKSKPLYCSYFMGLQ 353
++ G++ESR+R L +ER+ +++ H P D S ++K + +F+GL+
Sbjct: 385 SYGGFLESRIRLLVQSLERNP-DIILAHNDPNKHKPSKNAKFDVSPENKRITV-WFIGLE 442
Query: 354 RKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGM------QISVAHVTRRNL 401
+ D+ ++ FK + G+ +I + HV +RNL
Sbjct: 443 FSE-----HATSLDLTNEIQRFKTNFELQASSVKGIGPTCQVEIDMFHVKQRNL 491
>gi|193573537|ref|XP_001946233.1| PREDICTED: poly(A) polymerase gamma-like [Acyrthosiphon pisum]
Length = 640
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 183/466 (39%), Positives = 268/466 (57%), Gaps = 34/466 (7%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
++ G + V+ GADID + + PRH TR D+F + L E P + + V +A V
Sbjct: 78 LVCTFGSYRLGVYHKGADIDAIVIVPRHITRT-DYFATFYNKLKENPSINNVRAVEEAFV 136
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PV+K G+ ID+L+ARL+L + ED D+ QD +L+N + + VRSLNGCRVTD ILRLV
Sbjct: 137 PVIKMIIQGIEIDMLFARLALKEVHEDTDLQQDDLLRNLNPKCVRSLNGCRVTDSILRLV 196
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++F+ TL ++ WAKR VYSN G+LGG++WA+LVAR+CQLYPNA P+ L+ +FF
Sbjct: 197 PNRESFKKTLIAIKLWAKRHRVYSNALGYLGGVSWAMLVARVCQLYPNAAPATLIHKFFL 256
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
++++W+WP PVLL LG VWDPR N D+ H+MPIITP YP NS++NVS STL
Sbjct: 257 IFSKWQWPQPVLLKPSYFMDLGYPVWDPRVNMADRNHVMPIITPVYPQQNSTFNVSHSTL 316
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
I+ DEF+ +I + E+ W +F+P FF Y+ +L I + A ++L W+G
Sbjct: 317 AIIQDEFKTSLDIMGEILTGES--SWSKIFQPSKFFTKYRYFLAITVFANCDEELLEWRG 374
Query: 308 WVESRLRQLTLKIERHTYNMLQC----HPHPGDFS---DKSKPLYCS-YFMGLQRKQGVP 359
VESRLR L +E ++C H +P F DKS+ S +F+GL+ +
Sbjct: 375 LVESRLRFLPTSLEE-----IECVQRSHLNPDQFVLPYDKSQGRPSSVWFVGLEISKS-- 427
Query: 360 VGEGEQFDIRLTVKEFKQAVS--MYTLRKPGMQISVAHVTRRNLPNFV---------FPG 408
G D +++F V +T+ K GM I V H+ R++L ++V P
Sbjct: 428 NGTVVNLDFSTHIRDFCLLVKSRAHTIFKAGMDIQVNHLKRKDLRDYVPDELKKEKAIPN 487
Query: 409 GVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKR---KQTDDNV 451
V ++ + + R ++ V K + RKR +TDDN+
Sbjct: 488 TVGSKIIARLSTEGRHSVSELVEESQK--SPTSRKRGIEDETDDNI 531
>gi|392579948|gb|EIW73075.1| hypothetical protein TREMEDRAFT_67196 [Tremella mesenterica DSM
1558]
Length = 648
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/354 (45%), Positives = 224/354 (63%), Gaps = 13/354 (3%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VHGPG+DIDT+CV PRH +E FFGE +ML P VTE+ V A VPVMK
Sbjct: 87 GSYRLGVHGPGSDIDTICVCPRHVFKEH-FFGEFKEMLRAWPAVTEISAVESAFVPVMKT 145
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
SGV +DLL+AR++L + LD+ +D IL+ D+ + R LNG RVTD IL LVP +
Sbjct: 146 VISGVEVDLLFARVNLAEAGDKLDLEKDEILRGVDDASQRGLNGPRVTDMILNLVPDVAT 205
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FRT LR +R WAKRRG+YSNV GF GG+ WALL ARICQLYP A P+ +V++FF ++ QW
Sbjct: 206 FRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTARICQLYPTAAPATIVAKFFPIFYQW 265
Query: 193 RWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIM 250
WPNPVLL IE G + VW+P+ + +D H MPIITPAYP M +++N++ ST+ ++
Sbjct: 266 GWPNPVLLKKIESGPPNMHHSVWNPKLDRRDMAHRMPIITPAYPSMCTTHNITASTMSVI 325
Query: 251 MDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVE 310
+E R ++ + + N W LFE FF YK+Y+++ SA ++ +++W G VE
Sbjct: 326 KNEMLRAMQVTDRIMSNPGS-SWMELFEQIDFFSMYKSYVQVIASASTSEGIKDWGGTVE 384
Query: 311 SRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGE 364
SR+R L +E ++ N++ HP G S + F+ L ++ +GE
Sbjct: 385 SRIRTLVQDLE-NSDNIITAHPQMGGIS--------ATFLCLTEEEQAAASQGE 429
>gi|156843263|ref|XP_001644700.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
gi|156115348|gb|EDO16842.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
Length = 572
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 228/339 (67%), Gaps = 9/339 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTL V P+H TRE DFF ++L + E+ E+ PVPDA+VP
Sbjct: 84 VFTFGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDELLRKRKELEEIAPVPDAYVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K KF G+SIDL+ ARL + +P+ L +S ++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 143 IIKTKFDGISIDLICARLDVAQVPQTLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K FR LR ++ WA+RR VY NV GF GG+ WA+LVARICQLYPNA +++++RFF++
Sbjct: 203 KPIVFRIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLVARICQLYPNACSAVILNRFFKI 262
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++W+WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP M +++N++ ST +
Sbjct: 263 LSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRCHRMPVITPAYPSMCATHNITESTKK 322
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKG 307
+++ EF+RG EI + N+A W+ LF+ TFF YK YL + S + D+ W G
Sbjct: 323 VILKEFERGVEITNNIFSNKA--TWEDLFKRHTFFHDYKFYLTVTASTKGNDEQHLKWSG 380
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 346
VES++R L LK+E + HP+ F YC
Sbjct: 381 LVESKVRLLILKLEALP-GIKSAHPYVKPFEST----YC 414
>gi|401409652|ref|XP_003884274.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
gi|325118692|emb|CBZ54243.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
Length = 701
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 181/426 (42%), Positives = 258/426 (60%), Gaps = 35/426 (8%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V PG+DIDTLCV PRH TRE FF LH L + V++L PVPDA+ P
Sbjct: 193 IFTFGSYRLGVTTPGSDIDTLCVTPRHVTREA-FFKILHAKLQQDARVSKLTPVPDAYTP 251
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLD-ISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
V+KF F GV IDLL+ARL L VIP + + D +L++ DE+T RS+NG RV D +L+LV
Sbjct: 252 VLKFNFDGVEIDLLFARLPLPVIPSSWNSLENDFVLRHVDEKTARSVNGSRVADLVLKLV 311
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P + F+ TLR ++ WAK RG+YSNV G+LGGI+WA+LVAR CQLYPN PS L+ RFF
Sbjct: 312 PNKETFKVTLRFVKHWAKVRGIYSNVLGYLGGISWAILVARCCQLYPNFAPSQLIHRFFT 371
Query: 188 VYTQWRWPN-PVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 242
VY+ W+W N PVLLC I+ EG ++W+P+ N +D++HL+PIITPA+P MNS++NV
Sbjct: 372 VYSIWKWKNSPVLLCKIKEHTVEGLSNFKIWNPKVNVQDRHHLLPIITPAFPSMNSTHNV 431
Query: 243 STSTLRIMMDEFQRGHEICEAMEKNEADVDWD----TLFEPFTFFEAYKNYLRIDISAEN 298
S ST R++ DEF I + +K + ++ W + +P F ++K++L + I A+N
Sbjct: 432 SLSTKRVITDEFANAKRIFDVWDKKK-EISWTEALHLVLKPLD-FTSFKHFLELQIFAQN 489
Query: 299 ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH-PGDFSDKS------KPLYCSYFM- 350
R W GWVES++R L ++ER + C P G + KS +P+ C++
Sbjct: 490 ETVHRKWLGWVESKVRFLVRQLER----LAACPPFAAGGHTPKSEAAMTVRPIPCTFSFQ 545
Query: 351 --GLQRKQG--VPVGEGEQ---FDIRLTVKEFKQAVSMYTLR---KPGMQISVAHVTRRN 400
G + V + +Q D+R EF ++ + R + +Q+ V HV R
Sbjct: 546 EPGWEYASSMLVALNFAQQPCVIDLRPAAGEFVDLINQWPERAQLEGQIQLRVKHVRRSQ 605
Query: 401 LPNFVF 406
LP +V
Sbjct: 606 LPAYVL 611
>gi|324975487|gb|ADY62671.1| PAPa [Candida metapsilosis]
Length = 547
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 154/331 (46%), Positives = 226/331 (68%), Gaps = 5/331 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+GP +DID L V PRH TRE DFF Q++ + PE+ E++ V DA VP
Sbjct: 82 IFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTTFDQIIRKRPELQEINGVSDAFVP 140
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +F G+S+DL+ ARL++ +P D+ + ++L+N DE+ +RSLNG RVTD+IL+LVP
Sbjct: 141 IIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDERDLRSLNGTRVTDEILQLVP 200
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K F+ LRC++ WA+ R VY NV GF GG+ WA+L ARICQLYPNAV S++V +FF +
Sbjct: 201 KPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTARICQLYPNAVSSVIVEKFFSI 260
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
YT+W WP PVLL AIE+G L ++VW+PR D+ H MP+ITPAYP M +++N+++ST +
Sbjct: 261 YTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRLHRMPVITPAYPSMCATHNITSSTQK 320
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-RIDISAENADDLRNWKG 307
+++ E RG + +++ E + W LFE FF Y+ YL + + ++A++ W G
Sbjct: 321 VIIQELLRGASVMKSI--FEGEKTWSDLFERHNFFHRYRFYLCVVAATVDSAEEHHKWHG 378
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFS 338
+VES+LRQL LK+E T + HP+ DFS
Sbjct: 379 FVESKLRQLVLKLES-TEGIEIAHPYVKDFS 408
>gi|159489342|ref|XP_001702656.1| poly(a) polymerase [Chlamydomonas reinhardtii]
gi|158280678|gb|EDP06435.1| poly(a) polymerase [Chlamydomonas reinhardtii]
Length = 407
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 153/319 (47%), Positives = 212/319 (66%), Gaps = 6/319 (1%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGE----LHQMLTEMPEVTELHPVPDAHV 67
G + VHGPGAD+DTL VGPR+ R+ DFFG L ML++ P++T++ PVPDA V
Sbjct: 86 FGSYRLGVHGPGADMDTLVVGPRYVLRDSDFFGSEKHCLEYMLSQTPDITDIQPVPDAFV 145
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
P++ K+ GV ID+LYA L++ +PE LD+S ++L+ DE TVR+LNGCRVTD +L+LV
Sbjct: 146 PMIGIKYKGVQIDILYASLAMQTLPEQLDLSNHAVLRGCDEPTVRALNGCRVTDTMLKLV 205
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P+ + FRT LR ++ WA RG+ SNV G+LGG+N A++VA+ICQLYP A S ++ +FF
Sbjct: 206 PRQEVFRTALRAVKHWASLRGISSNVTGYLGGVNLAIMVAKICQLYPRAEASTVLLKFFI 265
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
+ W WP + L EE SLGL VWDPR +D LMP+ITPAYP MNS YNV STL
Sbjct: 266 LLKAWPWPRAIHLRIPEEHSLGLPVWDPRPGTRDSLALMPVITPAYPAMNSLYNVQRSTL 325
Query: 248 RIMMDEFQRGHEICEAMEKNEAD--VDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNW 305
+M +EF ++C + ++W LF P FF + Y+++++SA++ DL W
Sbjct: 326 EVMTEEFAAAADVCTSFLHCPPGKPIEWSRLFTPVPFFTQHSFYIQLEVSADSEGDLVLW 385
Query: 306 KGWVESRLRQLTLKIERHT 324
GWV SR+R+L +E H
Sbjct: 386 DGWVSSRIRRLVRNLEDHV 404
>gi|294657491|ref|XP_459799.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
gi|199432733|emb|CAG88038.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
Length = 571
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 157/332 (47%), Positives = 226/332 (68%), Gaps = 5/332 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+GPG+DIDTL V P+H TR DFF ++L + PE+ E+ V DA+VP
Sbjct: 83 IFTFGSYRLGVYGPGSDIDTLVVVPKHVTRS-DFFEVFDKILRKRPELEEIASVSDAYVP 141
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +F G+SIDL+ ARL + IP+DL + ++L+N DE+ +RSLNG RVTD+IL LVP
Sbjct: 142 IIKMEFGGISIDLICARLDIPRIPKDLKLDDKNLLRNIDEKDLRSLNGTRVTDEILTLVP 201
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K F+ LRC++ WA++R +Y+NV GF GG+ WA+LVARICQLYPNAV +++V +FF +
Sbjct: 202 KPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQLYPNAVSAVIVEKFFHI 261
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y QW WP PVLL IE+G L ++VW+P+ P D+ H MP+ITPAYP M +++N+++ST +
Sbjct: 262 YAQWSWPQPVLLKPIEDGPLQVRVWNPKLYPHDRQHRMPVITPAYPSMCATHNITSSTQK 321
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAE-NADDLRNWKG 307
I++DEF+RG +I + N++ W L TFF YK YL I + + +++D W G
Sbjct: 322 IILDEFKRGIDIMSQISMNKS--TWSDLLARHTFFYKYKFYLCIVAATQGSSEDHLKWGG 379
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 339
VESRLR L K+E T + HP+ F +
Sbjct: 380 MVESRLRLLIQKLEM-TEGIEIAHPYVKPFEN 410
>gi|406606978|emb|CCH41700.1| poly(A) polymerase [Wickerhamomyces ciferrii]
Length = 572
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 180/453 (39%), Positives = 267/453 (58%), Gaps = 55/453 (12%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + V+GPG+DIDTL V P+H TR+ DFF ++L E+ E+ PVPDA VP++K
Sbjct: 88 GSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFTVFDELLRTRSELEEIAPVPDAFVPIIKV 146
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
K SG+ IDL+YA+L L +P +L + ++L+N DE+ +RSLNG RVTD+IL+LVPK
Sbjct: 147 KISGIEIDLIYAKLDLPQVPINLTLGDKNLLRNLDEKDLRSLNGTRVTDEILQLVPKPVV 206
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
F+ +LR ++ WA+RR +Y+N+ GF GG+ WA+LVARICQLYPNAV S++VS+FF + TQW
Sbjct: 207 FKLSLRAIKLWAQRRAIYANIFGFPGGVAWAMLVARICQLYPNAVSSVIVSKFFHILTQW 266
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WP PVLL IE+G L ++VW+PR P+D+ H MP+ITPAYP M +++N++ ST +++++
Sbjct: 267 NWPQPVLLKPIEDGPLQVRVWNPRVYPQDRQHRMPVITPAYPSMCATHNITASTQKVILN 326
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRN--WKGWVE 310
E QRG I + ++ W+ LF FF YK YL I I+ DD ++ W G VE
Sbjct: 327 ELQRGSLIMNDIISHKK--QWEDLFVKHDFFYKYKFYLNI-IAFTRGDDEQHLKWSGLVE 383
Query: 311 SRLRQLTLKIER-------HTY--------------NMLQCHPHPGDFS----------- 338
S+LR L K+E H Y + + + G+FS
Sbjct: 384 SKLRLLVQKLENFQGINLAHPYVKTFEKSYLYSSDEELREIELNFGNFSKESNLKKFKEI 443
Query: 339 ---DKSKPL--------YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP 387
+K P+ + S ++GL GE ++FDI + +F +
Sbjct: 444 TEENKEDPIPEGSKIIHFTSLYIGLDITVS---GEDKKFDIHVPCNDFFTLCRGFPDYND 500
Query: 388 GM--QISVAHVTRRNLPNFVF-PGGVRPSRPSK 417
+ +++ HV +LP+FV+ G RP +P+K
Sbjct: 501 SLIYGLNIKHVKLYDLPSFVYGEGETRPEKPNK 533
>gi|3127182|gb|AAC16061.1| poly(A) polymerase II [Gallus gallus]
Length = 621
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 179/391 (45%), Positives = 246/391 (62%), Gaps = 24/391 (6%)
Query: 32 GPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVI 91
PRH R DFF ++ L + EV +L V +A VPV+K F G+ ID+L+ARL+L I
Sbjct: 2 APRHVERS-DFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTI 60
Query: 92 PEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYS 151
PEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YS
Sbjct: 61 PEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYS 120
Query: 152 NVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ 211
N+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L
Sbjct: 121 NILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLP 180
Query: 212 VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADV 271
VWDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A
Sbjct: 181 VWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA-- 238
Query: 272 DWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML--- 328
+W LFE FF+ YK+Y+ + SA W G VES++R L +E++ + L
Sbjct: 239 EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHV 298
Query: 329 --QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS- 380
Q P P + DK + + +GL K+ E D+ ++ F +QA++
Sbjct: 299 NPQSFPAPKENPDKEE-YRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINS 356
Query: 381 -MYTLRKPGMQISVAHVTRRN----LPNFVF 406
M+ + M+I+ HV R+ LPN V
Sbjct: 357 KMFEM---DMKIAARHVKRKQLHQLLPNHVL 384
>gi|399218218|emb|CCF75105.1| unnamed protein product [Babesia microti strain RI]
Length = 501
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/402 (39%), Positives = 242/402 (60%), Gaps = 17/402 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L+ G + V GP +DID LC+ P+ TR DFF + +L P V+++H V DA+ P
Sbjct: 91 LLTFGSYRLGVIGPDSDIDALCLCPQRITRN-DFFTVFYDILANHPNVSKIHAVADAYTP 149
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K + + ID+L+A L + I +L I D IL+N D+ T RS+NGCRV +L VP
Sbjct: 150 LIKLVYDDIDIDILFAILPIPTISPNLSILDDDILRNLDDITARSINGCRVASLVLSSVP 209
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
NFR TLR ++ WA++RG+YSN+ G+LGG+ WA+L AR+CQLYPN +P+ ++ +FF+V
Sbjct: 210 NEHNFRNTLRFIKLWAQKRGIYSNILGYLGGVAWAILTARVCQLYPNYLPNQIIHKFFKV 269
Query: 189 YTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
Y W W PV++ I++ G + +VWDP+ NP+D+ HLMPIITPA+P MNS++NV+
Sbjct: 270 YMLWNWKYPVVINKIKQPVNVPGLMMFKVWDPKTNPQDRLHLMPIITPAFPAMNSTHNVT 329
Query: 244 TSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR 303
+T R+M++EF+R HE+ K ++ + W+ L EP F +K++L I + A +
Sbjct: 330 NTTKRVMINEFKRAHELL----KTQSQMTWNDLLEPANIFNEFKHFLVIIVVASDEKAHS 385
Query: 304 NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
W GW+ESR+R L K+E + L+ PH D F+GL + E
Sbjct: 386 KWHGWIESRIRFLIRKLEAIEHTELRPWPHSITMEDPDWTNSKWIFIGLSYNK----TEE 441
Query: 364 EQFDIRLTVKEFKQAVSMY---TLRKPGMQISVAHVTRRNLP 402
QFDIR +KEFK + + T + + + + ++ + LP
Sbjct: 442 SQFDIRTPIKEFKNLIFSWQELTSYESKVDVRIEYMKKSQLP 483
>gi|45185228|ref|NP_982945.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|44980886|gb|AAS50769.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|374106148|gb|AEY95058.1| FABL002Cp [Ashbya gossypii FDAG1]
Length = 598
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/330 (47%), Positives = 222/330 (67%), Gaps = 5/330 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTL V P+H TR+ DFF ++L PE+ E+ PVP+A VP
Sbjct: 84 IFTFGSYRLGVHGPGSDIDTLVVVPKHVTRD-DFFTVFDELLRARPELDEIAPVPEAFVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K K+SG+SIDL+ ARL + +P +L +S ++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 143 IIKIKYSGISIDLICARLDIPQVPLNLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K F+ LR ++ WA+RR VY+NV GF GG+ WA+LVARICQLYPNA +++V+RFF +
Sbjct: 203 KPTAFKIALRAIKLWAQRRAVYANVFGFPGGVAWAMLVARICQLYPNACSAVIVARFFHI 262
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
T+W WP PVLL IE+G L ++VW+P+ D+ H MP+ITPAYP M S++N+ ST +
Sbjct: 263 LTRWSWPQPVLLKPIEDGPLQVRVWNPKIYANDRLHKMPVITPAYPSMCSTHNICESTKK 322
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKG 307
++++E QRG E+ + N+ W LF+ FF YK YL + S + +D+ W G
Sbjct: 323 VILNELQRGVEVTTDIFTNKK--TWGDLFQKHDFFYKYKFYLTVMASTKGSDEQHLKWSG 380
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES+LR L LK+E + L HP+ F
Sbjct: 381 LVESKLRLLVLKLEVLSGINL-AHPYTKPF 409
>gi|355709247|gb|AES03528.1| poly polymerase gamma [Mustela putorius furo]
Length = 603
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 56 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 115
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 6 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 65
Query: 116 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 175
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 66 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 125
Query: 176 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 235
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 126 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 185
Query: 236 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 295
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 186 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 243
Query: 296 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS-----DKSKPLYCSYFM 350
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 244 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYISMWFL 302
Query: 351 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 303 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 360
>gi|324975520|gb|ADY62700.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 152/332 (45%), Positives = 227/332 (68%), Gaps = 5/332 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+GP +DID L V PRH TRE DFF +++ + PE+ E++ V DA VP
Sbjct: 82 IFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTTFDKIIRQRPELQEINGVSDAFVP 140
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +F G+S+DL+ ARL++ +P D+ + ++L+N DE+ +RSLNG RVTD+IL+LVP
Sbjct: 141 IIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDERDLRSLNGTRVTDEILQLVP 200
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K F+ LRC++ WA+ R VY NV GF GG+ WA+L ARICQLYPNAV +++V +FF +
Sbjct: 201 KPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTARICQLYPNAVSAVIVEKFFNI 260
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
YT+W WP PVLL AIE+G L ++VW+PR D+ H MP+ITPAYP M +++N+++ST +
Sbjct: 261 YTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRQHRMPVITPAYPSMCATHNITSSTQK 320
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-RIDISAENADDLRNWKG 307
+++ E RG I +++ + E W LF FF Y+ YL + ++E+A++ W G
Sbjct: 321 VILQELTRGSSIMKSILEGEK--SWSDLFARHDFFHRYRFYLCVVAATSESAEEHHKWHG 378
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 339
+VES+LRQL +K+E T + HP+ DFS+
Sbjct: 379 FVESKLRQLVIKLE-STEGVELAHPYVKDFSN 409
>gi|367003753|ref|XP_003686610.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
gi|357524911|emb|CCE64176.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
Length = 555
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 151/314 (48%), Positives = 221/314 (70%), Gaps = 4/314 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTL V P++ TRE DFF Q L E E+ E+ PVPDA+VP
Sbjct: 84 VFTFGSYRLGVHGPGSDIDTLVVVPKYVTRE-DFFTVFDQSLRERKELDEIAPVPDAYVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K KFSG+SIDL+ A+L + +P +L ++ ++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 143 IIKIKFSGISIDLICAKLDIAQVPINLQLNDKNLLRNLDEKDLRALNGTRVTDEILELVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K FR LR ++ WA+RR VY NV GF GG+ WA+LVARICQLYPNA +++++RFF++
Sbjct: 203 KPIIFRIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLVARICQLYPNACSAVILNRFFKI 262
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++W+WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP M +++N++ ST +
Sbjct: 263 LSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKK 322
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENAD-DLRNWKG 307
+++ EF+RG +I + N+ + W+ LF+ TFF YK YL I + + D D W G
Sbjct: 323 VILKEFERGMKITNDIFSNK--LTWNDLFKKHTFFYDYKFYLTITTATKGTDEDHLKWSG 380
Query: 308 WVESRLRQLTLKIE 321
VES++R L LK+E
Sbjct: 381 LVESKVRLLILKLE 394
>gi|366987349|ref|XP_003673441.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
gi|342299304|emb|CCC67054.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
Length = 581
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 149/314 (47%), Positives = 219/314 (69%), Gaps = 4/314 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTL V P+H TRE DFF +L E E+ E+ PVPDA VP
Sbjct: 84 IFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDALLRERDELDEIAPVPDAFVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K KFSG+SIDL+ ARL + +P +L +S ++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 143 IIKMKFSGISIDLICARLDIAQVPLNLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K FR LR ++ WA+RR +Y+N+ GF GG+ WA+LVARICQLYPNA +++++RFF++
Sbjct: 203 KPNVFRIALRAIKLWAQRRAIYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFKI 262
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++W+WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP M +++N++ ST +
Sbjct: 263 LSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKK 322
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKG 307
++++EF RG ++ + N+ W LF+ FF YK YL I +S + +D+ W G
Sbjct: 323 VILEEFARGIQVTNDIFSNKG--TWADLFQKHDFFYKYKFYLTITVSTKGSDEEHLKWSG 380
Query: 308 WVESRLRQLTLKIE 321
VES+ R L LK+E
Sbjct: 381 LVESKTRLLVLKLE 394
>gi|156405096|ref|XP_001640568.1| predicted protein [Nematostella vectensis]
gi|156227703|gb|EDO48505.1| predicted protein [Nematostella vectensis]
Length = 486
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 178/389 (45%), Positives = 244/389 (62%), Gaps = 11/389 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADIDTL V PRH R DFF + +L P+V EL V +A VP
Sbjct: 93 IFTFGSFRLGVHTKGADIDTLLVAPRHIDRA-DFFSSFYDLLKNHPDVRELRAVENAFVP 151
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F + +DLL+ARL+ IP++LD+ +++L+N D + VRSLNGCRVTD+ILR VP
Sbjct: 152 VIKLIFCDIEVDLLFARLASPEIPDNLDLLDENLLKNLDPKCVRSLNGCRVTDEILRQVP 211
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I++FR TLR ++ WAK+ GVYSNV GFLGG++WA+LVAR CQLYPNA S L+ +FF V
Sbjct: 212 NIESFRLTLRAVKLWAKKHGVYSNVLGFLGGVSWAILVARTCQLYPNAAASTLLQKFFLV 271
Query: 189 YTQWRWPNPVLLCAI---EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
+++W WPNPVLL I E LG Q+WDPR NP D+YHLMPIITPAYP N S++VS S
Sbjct: 272 FSRWEWPNPVLLKNIPTPSENKLGFQIWDPRTNPGDRYHLMPIITPAYPQQNFSFSVSMS 331
Query: 246 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNW 305
T +IM DEF + E + +A +WD LF P FF YK+Y+ + S+ ++ W
Sbjct: 332 TRKIMCDEFFIRLKNTEDVISGKA--NWDILFTPPNFFHKYKHYIVLSASSNTEEEHLEW 389
Query: 306 KGWVESRLRQLTLKIERHTYNMLQCHPHP---GDFSDKSKPLYCSYFMGLQRKQGVPVGE 362
G VES++R L +E + Y L H +P G + + +F+GL ++ V
Sbjct: 390 IGLVESKVRLLISYLENNEYIKL-AHVNPKSYGPLDSEGEKHVTRWFIGLMCEKLENVNI 448
Query: 363 GEQFDIRL-TVKEFKQAVSMYTLRKPGMQ 390
++I++ K QAV + L+K +Q
Sbjct: 449 NLTYEIQMFENKVHTQAVKIMMLKKEWLQ 477
>gi|17565368|ref|NP_505683.1| Protein PAP-1 [Caenorhabditis elegans]
gi|3880758|emb|CAA16309.3| Protein PAP-1 [Caenorhabditis elegans]
Length = 655
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 171/427 (40%), Positives = 253/427 (59%), Gaps = 31/427 (7%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + VH GADIDTL V PRH R DFF +ML P VTELH V +A VP
Sbjct: 88 LFTFGSYRLGVHSSGADIDTLAVVPRHIDRS-DFFTSFKEMLNNDPNVTELHGVEEAFVP 146
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VMK K+SGV +D+L+ARL+L +P+ ++S D++L+N D+++VRSLNGCRV +Q+L+LVP
Sbjct: 147 VMKLKYSGVELDILFARLALKEVPDTQELSDDNLLRNLDQESVRSLNGCRVAEQLLKLVP 206
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ + F TLR ++ WAK G+YSN GF GGI WA+LVAR CQLYPNA PS LV R F +
Sbjct: 207 RQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQLYPNASPSRLVHRMFFI 266
Query: 189 YTQWRWPNPVLLCAIEEG-----SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
++ W WP+PV+L + +L VWDPRR D++H+MPIITPA+P NS++NV+
Sbjct: 267 FSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVMPIITPAFPEQNSTHNVT 326
Query: 244 TSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR 303
ST ++ +E EIC + +E W LFE FF YK+++ + ++A N ++
Sbjct: 327 RSTATVIKNEICEALEICRDI--SEGKSKWTALFEEVNFFSRYKHFIALIMAAPNEEEEL 384
Query: 304 NWKGWVESRLRQLTLKIERHTYNMLQCHPHPG----------DFSDKSKPLYCSYFMGLQ 353
N+ G++ESR+R L +ER+ +++ H P D + ++K + +F+GL+
Sbjct: 385 NYGGFLESRIRLLVQSLERN-QDIIIAHNDPNKHKPSPNAKFDVNPENKRVTV-WFIGLE 442
Query: 354 RKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGM------QISVAHVTRRNLPNFVFP 407
+ + D+ ++ FK V + G+ QI + +V R +L +
Sbjct: 443 FAE-----HAKTLDLTNEIQRFKTNVELQASNVKGIGPNCQVQIDMFYVKRNSLIQVISA 497
Query: 408 GGVRPSR 414
+R R
Sbjct: 498 ADLRRGR 504
>gi|341899656|gb|EGT55591.1| hypothetical protein CAEBREN_21062 [Caenorhabditis brenneri]
Length = 684
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 169/414 (40%), Positives = 250/414 (60%), Gaps = 31/414 (7%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + VH GADIDTL V PRH R DFF +ML + P VTELH V +A VP
Sbjct: 113 LFTFGSYRLGVHSSGADIDTLAVVPRHIDRS-DFFTSFKEMLNQDPNVTELHAVEEAFVP 171
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VMK K+SGV +D+L+ARL+L +P++ ++S D +L+N D +++RSLNGCRV +Q+L+LVP
Sbjct: 172 VMKLKYSGVELDILFARLALREVPDNQELSDDQLLRNLDPESIRSLNGCRVAEQLLKLVP 231
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ + F T LR ++ WAK G+YSN GF GGI+WA+L+AR CQLYPNA PS LV R F +
Sbjct: 232 RQKEFCTALRAIKVWAKNHGIYSNSMGFFGGISWAILIARACQLYPNASPSKLVHRMFFI 291
Query: 189 YTQWRWPNPVLLCAIEEG-----SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
++ W WP+PVLL + + +L +WDPR D++HLMPIITPA+P NS++NV+
Sbjct: 292 FSTWTWPHPVLLKELNQDRNDIPTLCELIWDPRHKNTDRFHLMPIITPAFPEQNSTHNVT 351
Query: 244 TSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR 303
ST +I+ DE EIC + A W LFE FF YK+++ + ++A N ++
Sbjct: 352 RSTHQIIKDEIWEALEICRDIHDGRA--KWSALFEEVNFFSRYKHFIALIMAAPNEEEEL 409
Query: 304 NWKGWVESRLRQLTLKIERHTYNMLQCHPHPG----------DFSDKSKPLYCSYFMGLQ 353
++ G++ESR+R L +ER+ +++ H P D S ++K + +F+GL+
Sbjct: 410 SYGGFLESRIRLLVQSLERNP-DIILAHNDPNKHKPSKNAKFDVSPENKRITV-WFIGLE 467
Query: 354 RKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGM------QISVAHVTRRNL 401
+ + D+ ++ FK V + G+ +I + +V R NL
Sbjct: 468 FAE-----HAKNLDLTNEIQRFKTNVELQASSVKGIGPTCQVEIDMFYVKRNNL 516
>gi|10835833|pdb|1F5A|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 513
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 182/402 (45%), Positives = 244/402 (60%), Gaps = 14/402 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAXLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHL PIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLXPIITPAYPQQNSTYNVSVSTRX 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+ ++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA W G
Sbjct: 336 VXVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 393
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +E++ + L Q P P + DK + + +GL K+ E
Sbjct: 394 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTXWVIGLVFKK-TENSEN 451
Query: 364 EQFDIRLTVKEFKQAVSMYTLRKPGMQ----ISVAHVTRRNL 401
D+ ++ F V + + I+ HV R+ L
Sbjct: 452 LSVDLTYDIQSFTDTVYRQAINSKXFEVDXKIAAXHVKRKQL 493
>gi|345492821|ref|XP_001602912.2| PREDICTED: poly(A) polymerase gamma-like [Nasonia vitripennis]
Length = 605
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 166/411 (40%), Positives = 239/411 (58%), Gaps = 32/411 (7%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PRH R D+F +L EVT+L V +A+VPV+K
Sbjct: 105 FGSYRLGVHHKGADIDALCVVPRHINRS-DYFSSFFDLLKSQMEVTDLRAVEEAYVPVIK 163
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ ID+L+A+L+L +P+ +D+ D +L+N D++ VRSLNGCRVTD+ILRLVP I+
Sbjct: 164 MNFDGIEIDMLFAKLALKEVPDSMDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIE 223
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAK+ G+YSNV G+LGG++WA+LVAR CQLYPNAV + L+ +FF V++Q
Sbjct: 224 NFRLALRAIKLWAKKNGIYSNVLGYLGGVSWAMLVARTCQLYPNAVAATLIEKFFLVFSQ 283
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WP PVLL + E +LG QVWDPR V+ S IM
Sbjct: 284 WKWPQPVLLKSPENVNLGFQVWDPR-------------------------VTMSDRTIMQ 318
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
+ F+ G I E + +A WD LFEP FF Y++Y+ + S+ A+D W G VES
Sbjct: 319 EAFETGLAITEEIIMGKA--SWDKLFEPPNFFGKYRHYIVLLASSSTAEDQLEWCGLVES 376
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDF---SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 368
++R L +ER+ N+ H +P F ++ +F+GL K+G + DI
Sbjct: 377 KIRHLIGTLERNP-NITLAHINPESFPPLKPEAGKHVSMWFIGLTFKKGENLNIDLTMDI 435
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 419
+ V+ ++ L K GM I HV R++L N++ ++ R + +
Sbjct: 436 KSFVETTERQAEQIKLFKNGMTIEAKHVKRKDLSNYIAANQIKRERKTSSS 486
>gi|255085208|ref|XP_002505035.1| predicted protein [Micromonas sp. RCC299]
gi|226520304|gb|ACO66293.1| predicted protein [Micromonas sp. RCC299]
Length = 404
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 161/322 (50%), Positives = 215/322 (66%), Gaps = 11/322 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGE--------LHQMLTEMPEVTELH 60
L G + VHGP ADIDTLC+GPRH TR EDFFG + + P ++
Sbjct: 62 LYTFGSYRLGVHGPAADIDTLCIGPRHLTRAEDFFGSEWTGYEGSFYLEMKNHPGTDQVV 121
Query: 61 PVPDAHVPVMKFKFSGVSIDLLYARLSLWV-IPEDLDISQDSILQNADEQTVRSLNGCRV 119
VPDA VP +K F G ID+ Y + +V +PEDLD+ Q +ILQN D+ +V+SLNGCRV
Sbjct: 122 AVPDAVVPELKLVFRGFEIDIAYVCMGSYVSVPEDLDVCQTTILQNLDDASVKSLNGCRV 181
Query: 120 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 179
DQ+LRLVP FR LR +R WAK RGVYSNV G+ GG+N ALLVAR+CQLYPNA PS
Sbjct: 182 ADQLLRLVPNHDAFRIALRALRVWAKERGVYSNVLGYFGGVNLALLVARVCQLYPNAAPS 241
Query: 180 MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSS 239
MLV FF+++ W+W PV+L I + GL+VWD R N +++ LM IITPAYP NS+
Sbjct: 242 MLVYSFFQLWDAWQWSTPVMLTPIVDEGHGLRVWDERVNKAERFQLMKIITPAYPAQNST 301
Query: 240 YNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA 299
+NV+ STL ++ +EF+RG E+C + ++ W++L+EP FF +K+YL++ I+A +
Sbjct: 302 FNVTHSTLHVLKNEFKRGREVCAEVLMSKK--RWESLWEPLPFFTMHKHYLQVTIAAVSE 359
Query: 300 DDLRNWKGWVESRLRQLTLKIE 321
DD + W+GWV SRLR L +E
Sbjct: 360 DDFKKWEGWVHSRLRMLVQGVE 381
>gi|391336102|ref|XP_003742422.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 576
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 187/486 (38%), Positives = 265/486 (54%), Gaps = 59/486 (12%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADIDTLCV PRH R DFF ++L + P+V +L V +A+VP
Sbjct: 94 IFTFGSYRLGVHTKGADIDTLCVAPRHVERT-DFFTSFVELLKQQPQVRDLRAVEEAYVP 152
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K +F G+ D+L+ARL+L IP D ++ ++L+N D + VRSLNGCRVTD+IL LVP
Sbjct: 153 VIKMEFDGIEFDMLFARLALKDIPPDQELRDMTLLKNLDAKCVRSLNGCRVTDEILHLVP 212
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I FRT LR ++ WAK++GVYSNV G+LGG++WA+LVAR CQLYP+A +++V +FF V
Sbjct: 213 DIPVFRTALRTIKLWAKKKGVYSNVLGYLGGVSWAMLVARTCQLYPHAAAAVVVQKFFLV 272
Query: 189 YTQWRWPNPVLL---CAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
++QW WP PV L A + G VWD R N D+YHLMPIITP YP NS++N S S
Sbjct: 273 FSQWPWPKPVHLRTQTAAHQHLGGFSVWDSRTNVADRYHLMPIITPVYPEQNSTFNTSLS 332
Query: 246 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNW 305
T IM F+ G + E + K + W LF P FF YK ++ + A +DL W
Sbjct: 333 TRTIMTKAFKEGLAVTENILKGKG--TWHDLFSPPEFFGQYKTFIMLTAVANTKEDLLTW 390
Query: 306 KGWVESRLRQLTLKIER-----------HTYNMLQ--------------------CHPHP 334
G VES++R L + +ER +YN ++ P
Sbjct: 391 YGLVESKIRTLIISLERVPCIEIAHVNPKSYNKVKEDKPPAEPVKEQQEESPKASAETEP 450
Query: 335 GDFSDKSKPLY------CSYFMGLQRKQGVPVGEGEQFDIRLTVKE-----FKQAVSMYT 383
+ +K++P ++F+GL Q E D+ V+ F+QA ++
Sbjct: 451 NETEEKAEPKPQEETEGVNWFIGLHFGQ---TKEKLNLDLTENVRNLRDVIFRQAENIKI 507
Query: 384 LRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRK 443
L K GM + V + RR+L + P V P + +R RK S + A++ K
Sbjct: 508 L-KDGMDVEVRVLKRRDLATVLPPEEVALLPPP----EKKRKSIRKASEES---AENPSK 559
Query: 444 RKQTDD 449
R + DD
Sbjct: 560 RIKEDD 565
>gi|255723652|ref|XP_002546758.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
gi|240130534|gb|EER30100.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
Length = 557
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/332 (45%), Positives = 223/332 (67%), Gaps = 5/332 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+GPG+DIDTL V P+H TR DFF +++L E+ E+ PVPDA VP
Sbjct: 83 IFTFGSYRLGVYGPGSDIDTLIVVPKHVTRN-DFFETFYELLKTRDELEEIAPVPDAFVP 141
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +F+G+SIDL++ARL + + DL + ++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 142 IIKIEFAGISIDLIFARLDIPRVSRDLTLDDKNLLKNIDEKDLRALNGTRVTDEILTLVP 201
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K F+ LRC++ WA++R +Y+NV GF GG+ WA+LVARICQLYPNAV ++++ +FF +
Sbjct: 202 KQTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQLYPNAVSAVIIEKFFHI 261
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y+QW WP PVLL IE+G L ++VW+P+ D+ H MP+ITPAYP M +++N+++ST +
Sbjct: 262 YSQWAWPQPVLLKQIEDGPLQVRVWNPKLYAPDRQHRMPVITPAYPSMCATHNITSSTQK 321
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAE-NADDLRNWKG 307
+++ EFQRG EI + N W LFE FF YK YL I + + N+++ + G
Sbjct: 322 VILSEFQRGIEIMNGI--NSGSKTWSDLFERHDFFFRYKFYLCIVAATKSNSEEHLKYGG 379
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 339
VES+LR L K+E + HP+ F D
Sbjct: 380 MVESKLRLLVQKLEL-VEGIELAHPYVKTFED 410
>gi|448086239|ref|XP_004196053.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359377475|emb|CCE85858.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 188/491 (38%), Positives = 270/491 (54%), Gaps = 65/491 (13%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+GPG+DID L V P+H TR DFF ++L E E+ E+ VPDA+VP
Sbjct: 83 IFTFGSYRLGVYGPGSDIDALVVVPKHVTRN-DFFEVFEKILRERKELEEIAAVPDAYVP 141
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +G+SIDL++ARL + +P+DL + ++L+N DE+ +RSLNG RVTD+IL LVP
Sbjct: 142 IIKMVLNGISIDLIFARLDVPKVPKDLKLDDKNLLRNIDEKDLRSLNGTRVTDEILTLVP 201
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K F+ LRC++ WA++R +Y+NV GF GG+ WA+LVARICQLYPNAV +++V +FF +
Sbjct: 202 KPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQLYPNAVSAVVVEKFFHI 261
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y QW WP PVLL IE+G L ++VW+PR P D+ H MP+ITPAYP M +++N+++ST +
Sbjct: 262 YAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITPAYPSMCATHNITSSTQK 321
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA-DDLRNWKG 307
I+M EF+RG +I + N W L TFF YK YL I + + + ++ W G
Sbjct: 322 IIMKEFRRGIDIMNQISGNNK--TWANLLARHTFFHNYKFYLCIVAATKGSYEEHIKWSG 379
Query: 308 WVESRLRQL----------------------------------------TLKIERHTYNM 327
VESRLR L TL+ E+ T ++
Sbjct: 380 MVESRLRILVQKLELTEGIELAHPYVKTFEHSFSSNDSEKIQEVINSYGTLQGEKLTKDV 439
Query: 328 LQCHPH---PGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTL 384
Q P D SD K F+GL+ + G ++ DI+ EF +
Sbjct: 440 TQTDPQNKESEDSSDTIKVHLTKLFIGLE--IDLNKGGEKKLDIQYPCSEFFNICKSWQS 497
Query: 385 RKPGMQ-ISVAHVTRRNLPNFVF-PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGR 442
+ + + HV +LPN V+ G RP + SK RR L K DD +
Sbjct: 498 YDEKLHSVQIKHVKLFDLPNDVYVEGEQRPVKTSK-----RRKLAVK---------DDDK 543
Query: 443 KRKQTDDNVDT 453
KR ++ V T
Sbjct: 544 KRPKSVGAVAT 554
>gi|324975502|gb|ADY62684.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 151/332 (45%), Positives = 226/332 (68%), Gaps = 5/332 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+GP +DID L V PRH TRE DFF +++ + E+ E++ V DA VP
Sbjct: 82 IFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTTFDKIIRQRSELQEINGVSDAFVP 140
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +F G+S+DL+ ARL++ +P D+ + ++L+N DE+ +RSLNG RVTD+IL+LVP
Sbjct: 141 IIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDERDLRSLNGTRVTDEILQLVP 200
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K F+ LRC++ WA+ R VY NV GF GG+ WA+L ARICQLYPNAV +++V +FF +
Sbjct: 201 KPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTARICQLYPNAVSAVIVEKFFNI 260
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
YT+W WP PVLL AIE+G L ++VW+PR D+ H MP+ITPAYP M +++N+++ST +
Sbjct: 261 YTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRQHRMPVITPAYPSMCATHNITSSTQK 320
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-RIDISAENADDLRNWKG 307
+++ E RG I +++ + E W LF FF Y+ YL + ++E+A++ W G
Sbjct: 321 VILQELTRGSNIMKSILEGEK--SWSDLFARHDFFHRYRFYLCVVAATSESAEEHHKWHG 378
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 339
+VES+LRQL +K+E T + HP+ DFS+
Sbjct: 379 FVESKLRQLVIKLE-STEGVELAHPYVKDFSN 409
>gi|254578066|ref|XP_002495019.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
gi|238937909|emb|CAR26086.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
Length = 567
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 150/314 (47%), Positives = 213/314 (67%), Gaps = 4/314 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTL V P+H RE DFF L ++L PE+ E+ PVPDA VP
Sbjct: 84 IFTFGSYRLGVHGPGSDIDTLVVVPKHVMRE-DFFTVLDEILRSRPELEEIAPVPDAFVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K KFSG+SIDL+ A+L L IP+ L +S ++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 143 IIKIKFSGISIDLICAKLDLAQIPQSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K FR LR ++ WA RR +Y+NV GF GG+ WA+LVARICQLYPNA +++++RFF++
Sbjct: 203 KPIVFRIALRAIKLWANRRAIYANVFGFPGGVAWAMLVARICQLYPNATSAVILNRFFKI 262
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++W+WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP M +++N++ ST R
Sbjct: 263 LSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKR 322
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKG 307
+++ E + G I + N+ W LF FF YK YL + S D+ W G
Sbjct: 323 VILQELENGISITNDIFSNKK--TWSDLFTKHNFFYKYKFYLTVMASTRGTDEENLKWSG 380
Query: 308 WVESRLRQLTLKIE 321
VES++R L LK+E
Sbjct: 381 MVESKVRLLVLKLE 394
>gi|255713432|ref|XP_002552998.1| KLTH0D06380p [Lachancea thermotolerans]
gi|238934378|emb|CAR22560.1| KLTH0D06380p [Lachancea thermotolerans CBS 6340]
Length = 594
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 150/314 (47%), Positives = 215/314 (68%), Gaps = 4/314 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTL V P+H TRE DFF Q+L E+ E+ PVPDA VP
Sbjct: 84 IFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDQILRTRSELEEIAPVPDAFVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K KFSG+SIDL+ ARL + +P +L ++ ++L+N DE+ +R+LNG RVTD+IL+LVP
Sbjct: 143 IIKIKFSGISIDLICARLDIAQVPVNLTLADKNLLRNLDEKDLRALNGTRVTDEILQLVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K +F+ LR ++ WA+RR VY+N+ GF GG+ WA+LVARICQLYPNA +++++RFF +
Sbjct: 203 KPTSFKIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILTRFFHI 262
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
T+W WP PVLL IE+G L ++VW+PR +D+ H MP+ITPAYP M +++N+S ST +
Sbjct: 263 LTKWNWPQPVLLKPIEDGPLQVRVWNPRIYAQDRSHKMPVITPAYPSMCATHNISESTKK 322
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKG 307
+++ E +RG +I + N+ W LF+ FF YK YL + S + + W G
Sbjct: 323 VILAELERGAQISSEIFSNKK--TWSDLFQKHDFFYKYKFYLTVMASTSGSSEQHLKWSG 380
Query: 308 WVESRLRQLTLKIE 321
VES+LR L K+E
Sbjct: 381 LVESKLRLLVQKLE 394
>gi|126139251|ref|XP_001386148.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
gi|126093430|gb|ABN68119.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
Length = 556
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 155/342 (45%), Positives = 230/342 (67%), Gaps = 14/342 (4%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + V+GPG+D+DTL V P+H +RE DFF +++ + PE+ E+ PVPDA VP++K
Sbjct: 86 FGSYRLGVYGPGSDLDTLVVVPQHVSRE-DFFTVFAEIIRKRPELEEIVPVPDAFVPIIK 144
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
++ GV +DL++A L++ IP D+ + ++L+N DE+ +RSLNG RVTD+IL+LVPK
Sbjct: 145 IEYDGVPLDLIFACLNVPRIPLDMTLDDKNLLRNLDERDLRSLNGTRVTDEILQLVPKPT 204
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
F+ LRC++ WA+++ VY NV GF GG+ WA+LVARICQLYPNAV +++V +FF +YT+
Sbjct: 205 VFKHALRCIKMWAQQKAVYGNVFGFPGGVAWAMLVARICQLYPNAVSAVIVEKFFNIYTK 264
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W WP PVLL IE+G L ++VW+PR D+ H MP+ITPAYP M +++N+++ST ++++
Sbjct: 265 WNWPQPVLLKPIEDGPLQVRVWNPRLYANDRLHRMPVITPAYPSMCATHNITSSTQKVIL 324
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRN--WKGWV 309
E ++G E+ + N W LF+ FF YK YL + ++A A D + W G +
Sbjct: 325 SELEKGAEVVRQI--NLGKKSWSDLFDRHDFFHHYKFYLCV-VAATVASDEEHLKWTGLI 381
Query: 310 ESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMG 351
ES+LR L LK+E T + HP+ DFSD SY +G
Sbjct: 382 ESKLRHLVLKLEV-TEGVELAHPYVKDFSD-------SYVLG 415
>gi|448081751|ref|XP_004194965.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359376387|emb|CCE86969.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 187/490 (38%), Positives = 269/490 (54%), Gaps = 63/490 (12%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+GPG+DID L V P+H TR DFF ++L E ++ E+ VPDA+VP
Sbjct: 83 IFTFGSYRLGVYGPGSDIDALVVVPKHVTRN-DFFEVFEKILRERKDLEEIAAVPDAYVP 141
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +G+SIDL++ARL + +P+DL + ++L+N DE+ +RSLNG RVTD+IL LVP
Sbjct: 142 IIKMILNGISIDLIFARLDVPKVPKDLKLDDKNLLRNIDEKDLRSLNGTRVTDEILTLVP 201
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K F+ LRC++ WA++R +Y+NV GF GG+ WA+LVARICQLYPNAV +++V +FF +
Sbjct: 202 KPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQLYPNAVSAVIVEKFFHI 261
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y QW WP PVLL IE+G L ++VW+PR P D+ H MP+ITPAYP M +++N+++ST +
Sbjct: 262 YAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITPAYPSMCATHNITSSTQK 321
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA-DDLRNWKG 307
I+M EF+RG +I + N W L TFF YK YL I + + ++ W G
Sbjct: 322 IIMKEFRRGIDIMNQINGNNK--TWANLLARHTFFHNYKFYLCIVAATKGPYEEHIKWSG 379
Query: 308 WVESRLRQL----------------------------------------TLKIERHTYNM 327
VESRLR L TL+ E+ T ++
Sbjct: 380 MVESRLRILVQKLELTEGIELAHPYVKTFEHSFSSNDSEKIQEVINTYGTLQGEKLTKDV 439
Query: 328 LQCHPHPG---DFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTL 384
Q P D SD K F+GL+ + G ++ DI+ EF +
Sbjct: 440 TQIDPQSKESEDSSDNIKVHLTKLFIGLE--IDLNKGGEKKLDIQYPCSEFFNICKSWQS 497
Query: 385 RKPGMQ-ISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRK 443
+ + + HV +LPN V+ G R RP K + RR L K DD +K
Sbjct: 498 YDEKLHSVQIKHVKLYDLPNDVYVEGER--RPVKTS--KRRKLAVK---------DDDKK 544
Query: 444 RKQTDDNVDT 453
R ++ V T
Sbjct: 545 RPKSVGAVAT 554
>gi|146416103|ref|XP_001484021.1| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 154/328 (46%), Positives = 219/328 (66%), Gaps = 5/328 (1%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + V+GPG+DIDTL V P+H R DFF +L E PE+ E+ VPDA VP++K
Sbjct: 87 GSYRLGVYGPGSDIDTLVVVPKHVNRT-DFFTVFESLLRERPELEEIASVPDAFVPIIKI 145
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
+F G+SIDL+ A+L + +P DL + ++L+N DE+ +RSLNG RVTD+IL LVPK
Sbjct: 146 EFGGISIDLICAKLDIGKVPRDLTLGDKNLLRNLDEKDLRSLNGTRVTDEILTLVPKPTV 205
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
F+ LRC++ WA++R +Y+N+ GF GG+ WA+L ARICQLYPNAV +++V +FF +Y+QW
Sbjct: 206 FKHALRCIKMWAQQRAIYANIFGFPGGVAWAMLTARICQLYPNAVSAVIVEKFFHIYSQW 265
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WP PVLL IE+G L ++VW+PR P D+ H MP+ITPAYP M +++N+++ST I++
Sbjct: 266 SWPQPVLLKQIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCATHNITSSTQAIIVS 325
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAE-NADDLRNWKGWVES 311
EF+RG EI + + +W LF FF YK YL + S + +A++ W G VES
Sbjct: 326 EFKRGAEIMNDISIGKK--EWGDLFARHEFFFRYKFYLCVVASTKGSAEEHLKWSGMVES 383
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSD 339
+LR L K+E T + HP+ F D
Sbjct: 384 KLRILVQKLEL-TEGITIAHPYVKTFED 410
>gi|367008660|ref|XP_003678831.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
gi|359746488|emb|CCE89620.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
Length = 582
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 160/368 (43%), Positives = 238/368 (64%), Gaps = 14/368 (3%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VHGPG+DIDTL V P+H TRE DFF ++L E+ E+ VPDA VP++K
Sbjct: 88 GSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDELLRGRQELEEIAAVPDAFVPIIKM 146
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
KFSG+SIDL+ A L L IP+ L ++ ++L+N DE+ +R+LNG RVTD+IL LVPK
Sbjct: 147 KFSGISIDLICAHLDLAQIPQSLTLADKNLLRNLDEKDLRALNGTRVTDEILELVPKPIV 206
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR LR ++ WA+RR +Y+NV GF GG+ WA+LVARICQLYPNA +++++RFF++ ++W
Sbjct: 207 FRIALRAIKLWAQRRAIYANVFGFPGGVAWAMLVARICQLYPNACSAVILNRFFKILSEW 266
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
+WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP M +++N++ ST ++++
Sbjct: 267 KWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKKVILG 326
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRN--WKGWVE 310
E RG I + N+ W LF+ TFF YK YL + ++A N D ++ W G VE
Sbjct: 327 ELGRGIRITNDIFTNKK--TWADLFQRHTFFHEYKFYLTV-MAATNGDSEQHLKWSGMVE 383
Query: 311 SRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRL 370
S++R L LK+E T + HP+ +KP +Y+ + ++ V +
Sbjct: 384 SKVRLLVLKLEALT-GIKIAHPY-------TKPFETAYYYHNEEERKKIVDNYGTYKTED 435
Query: 371 TVKEFKQA 378
+KEFK+
Sbjct: 436 VLKEFKKV 443
>gi|350638725|gb|EHA27081.1| hypothetical protein ASPNIDRAFT_46294 [Aspergillus niger ATCC 1015]
Length = 579
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 177/448 (39%), Positives = 252/448 (56%), Gaps = 47/448 (10%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE---VTELHPVPDAHVPV 69
G + V+GPG+DIDTL VGP+H + DFF + +L +M + ++ PVPDA+VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLVVGPKHVIID-DFFSDFPPILEKMAAPGAIEKMTPVPDAYVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + SG+SIDL++ARL + IP +LD+ + L+ DE+ VRSLNG RVTD+IL LVP+
Sbjct: 149 IKLELSGISIDLIFARLIIPSIPMNLDLKNNDYLRGLDEREVRSLNGTRVTDEILELVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+
Sbjct: 209 QKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
+W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++NVS ST +
Sbjct: 269 NKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGW 308
++ E QRG +I + + + + W+ LF TFF + YK YL I S+ + W G
Sbjct: 329 ILRELQRGGDIVDKIFLKQ--LRWEDLFARHTFFTKDYKYYLSITASSRTKEAESVWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF----------------------SDKSKPLYC 346
VES++R L ++R + HP P F DK
Sbjct: 387 VESKIRHLVGALDRKA-TIAIAHPFPKGFERVHRVSSEEEIEAVKTGSTKYQDKGTKTET 445
Query: 347 SYFMGLQRKQGVPVGEGEQFDIRLTV-KEFKQAVSMYTLR----------KPGMQ----- 390
+ M Q E D+ K MYT +PG Q
Sbjct: 446 TDEMKDAAHQAAAQNGAENTDVAAAENKPVDDTHVMYTTTYYIGLELKPLEPGYQPGIND 505
Query: 391 ISVAHVTRRNLPNFVF-PGGVRPSRPSK 417
+++ HV +LP VF PG RP+RP K
Sbjct: 506 LAITHVRNFDLPEDVFQPGETRPTRPKK 533
>gi|190347092|gb|EDK39304.2| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 154/328 (46%), Positives = 219/328 (66%), Gaps = 5/328 (1%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + V+GPG+DIDTL V P+H R DFF +L E PE+ E+ VPDA VP++K
Sbjct: 87 GSYRLGVYGPGSDIDTLVVVPKHVNRT-DFFTVFESLLRERPELEEIASVPDAFVPIIKI 145
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
+F G+SIDL+ A+L + +P DL + ++L+N DE+ +RSLNG RVTD+IL LVPK
Sbjct: 146 EFGGISIDLICAKLDIGKVPRDLTLGDKNLLRNLDEKDLRSLNGTRVTDEILTLVPKPTV 205
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
F+ LRC++ WA++R +Y+N+ GF GG+ WA+L ARICQLYPNAV +++V +FF +Y+QW
Sbjct: 206 FKHALRCIKMWAQQRAIYANIFGFPGGVAWAMLTARICQLYPNAVSAVIVEKFFHIYSQW 265
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WP PVLL IE+G L ++VW+PR P D+ H MP+ITPAYP M +++N+++ST I++
Sbjct: 266 SWPQPVLLKQIEDGPLQVRVWNPRLYPHDRSHRMPVITPAYPSMCATHNITSSTQAIIVS 325
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAE-NADDLRNWKGWVES 311
EF+RG EI + + +W LF FF YK YL + S + +A++ W G VES
Sbjct: 326 EFKRGAEIMNDISIGKK--EWGDLFARHEFFFRYKFYLCVVASTKGSAEEHLKWSGMVES 383
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSD 339
+LR L K+E T + HP+ F D
Sbjct: 384 KLRILVQKLEL-TEGITIAHPYVKTFED 410
>gi|410079098|ref|XP_003957130.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
gi|372463715|emb|CCF57995.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
Length = 567
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 155/339 (45%), Positives = 225/339 (66%), Gaps = 9/339 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTL V P+H +RE DFF E +L E E+ E+ PVPDA VP
Sbjct: 84 IFTFGSYRLGVHGPGSDIDTLVVVPKHVSRE-DFFTEFDSLLRERSELDEIAPVPDAFVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K K G+SIDLL A+L + +PE L +S +++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 143 VIKIKLRGISIDLLCAKLDIAQVPESLVLSDNNLLRNVDEKDLRALNGTRVTDEILELVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K FR LR ++ WA+ R VY+NV GF GG+ WA+LVARICQLYPNA +++++RFF++
Sbjct: 203 KPIVFRIALRAIKLWAQNRAVYANVFGFPGGVAWAMLVARICQLYPNACSAVILNRFFKI 262
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++W+WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP M +++N++ ST +
Sbjct: 263 LSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITDSTKK 322
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKG 307
++++EF RG +I + ++ W LF FF YK YL I S +D+ W G
Sbjct: 323 VILEEFSRGIQITNDIFSSKK--SWSDLFNKHEFFYKYKFYLTITASTRASDEEHLKWSG 380
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 346
VES++R L LK+E + + HP F + +YC
Sbjct: 381 LVESKVRLLVLKLEALS-GIKIAHPFIKPF----ETIYC 414
>gi|412986520|emb|CCO14946.1| predicted protein [Bathycoccus prasinos]
Length = 632
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 165/426 (38%), Positives = 241/426 (56%), Gaps = 27/426 (6%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFG--------ELHQMLTEMPEVTELH 60
L G + VHGP ADID+L +GP+H R EDFFG + + + ++
Sbjct: 85 LYTFGSYRLGVHGPAADIDSLVIGPKHIDRAEDFFGFEEDDFEGSFYDYMRKHEGTEKIV 144
Query: 61 PVPDAHVPVMKFKFSGVSIDLLYARLSLWV-IPEDLDISQDSILQNADEQTVRSLNGCRV 119
VPDA VP +K +F G ID+ Y L + +P DLD+ IL D+ V+SL GCRV
Sbjct: 145 AVPDAVVPELKTEFRGFEIDVAYCSLPGYSNVPLDLDVLSAKILHGLDDAGVKSLAGCRV 204
Query: 120 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 179
D +L+LV +R LR +R WA RRGVYSNV GF GG+N A+LVAR+CQLYPNA S
Sbjct: 205 ADSLLKLVTNHSEYRIALRALRLWAARRGVYSNVVGFFGGVNLAILVARVCQLYPNASAS 264
Query: 180 MLVSRFFRVYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 235
MLV FF+++ W W PV+L +++ + GL+ WD R N ++Y LM IITPAYP
Sbjct: 265 MLVYSFFQIWDNWVWTTPVMLTSLDIAPKDQIPGLRHWDERVNKPERYQLMKIITPAYPA 324
Query: 236 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 295
NS++NVS+STL ++ EF+RG + + EA W ++ FF YK YL++ ++
Sbjct: 325 QNSTFNVSSSTLEVLKREFKRGKIVTGKVLIGEA--KWTDVWSDVQFFAKYKTYLQLIVT 382
Query: 296 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD--KSKPLYCSYFMGLQ 353
A+N +D + W+GWV SRL+ L +E + + HP F D K K ++C+ F GL
Sbjct: 383 ADNEEDFKKWEGWVGSRLKNLVQGVETFSEGAMMAHPGVKKFYDPEKDKEVHCNVFFGLF 442
Query: 354 RKQGVPVG---EGEQFDIRLTVKEFKQAVSMYTLR-------KPGMQISVAHVTRRNLPN 403
G E ++ ++ ++ F+ V Y R KPGM + + + ++++P+
Sbjct: 443 PNPSTTSGDAREKKKINLNPAIENFQMTVGNYIDRATGSVNWKPGMGVQIKLLRKKDIPS 502
Query: 404 FVFPGG 409
+ P G
Sbjct: 503 WALPEG 508
>gi|50557132|ref|XP_505974.1| YALI0F28039p [Yarrowia lipolytica]
gi|49651844|emb|CAG78786.1| YALI0F28039p [Yarrowia lipolytica CLIB122]
Length = 518
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 156/330 (47%), Positives = 215/330 (65%), Gaps = 5/330 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G VHGPG+DIDTL V P+H TRE DFF ++L E PE+ E+ VPDA VP
Sbjct: 82 IFTFGSYSLGVHGPGSDIDTLIVVPKHVTRE-DFFEVFERLLRERPELEEISAVPDAFVP 140
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K KF G+SIDL+ ARL + +P DL + D++L+N D++ +R+LNG RVTD ILRLVP
Sbjct: 141 IIKVKFMGISIDLISARLDIPKVPLDLTLEDDNLLRNVDDKDLRALNGTRVTDDILRLVP 200
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
F+ LR ++ WA+ R VY N+ GF GG+ W +LVAR+CQLYPNAV ++++SRFF V
Sbjct: 201 NKTVFKHALRVIKIWAQNRAVYGNIMGFPGGVQWGILVARVCQLYPNAVAAVILSRFFNV 260
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+WRWP PVLL IE+G L +VW+PR +DK H MPIITPAYP M +++N++ ST +
Sbjct: 261 LLRWRWPQPVLLKKIEDGPLQARVWNPRIYSQDKLHRMPIITPAYPSMCATHNITASTQK 320
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAE-NADDLRNWKG 307
+++ E +RG +I + + W LFE FF YK YL I +++ A+ W G
Sbjct: 321 VILRELERGGQILNEIMLGQK--PWSALFEKHHFFSDYKYYLSIVAASKGTAEQQLKWSG 378
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDF 337
+VES+LR L K+E L HP+ F
Sbjct: 379 FVESKLRHLVQKLELLDSIEL-AHPYVKTF 407
>gi|261191352|ref|XP_002622084.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239589850|gb|EEQ72493.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239612743|gb|EEQ89730.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis ER-3]
Length = 599
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/329 (46%), Positives = 219/329 (66%), Gaps = 8/329 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL VGP+H + E DFF + +L M + +L PVPDA VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLVVGPKHVSFE-DFFSDFPPVLENMAPLGAIEKLTPVPDAFVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + SG+SIDL+YARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL LVP+
Sbjct: 149 IKIELSGISIDLIYARLLVHSVPLNLDLKNKDLLRGLDEKEIRCVNGTRVTDEILELVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S +V +FFR+
Sbjct: 209 QKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSAIVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
QW+WP PVLL IEEG L ++VW+P+ DKYHLMPIITPAYP M +++NVS ST +
Sbjct: 269 NQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATHNVSLSTKAV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGW 308
++ E +RG +I + + + + W+ LF TFF + YK YL I ++ + D W G
Sbjct: 329 LLRELKRGGDIADRIFVGQ--LTWNDLFTRHTFFSQDYKYYLSITSASRSKDAQSVWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES+LR L ++R + ++ HP P F
Sbjct: 387 VESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 346 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNF 404
+Y++GL+ K VP G DI FK + + +PG+ I++ HV +LP+
Sbjct: 484 TTYYIGLEVKPLVP-GAARSLDISADTHIFKSTCTSWPQYQPGINDINITHVRNYDLPDD 542
Query: 405 VF-PGGVRPSRPSKGTWDSRRALERKVSSH 433
VF PG VRPSRP K A +K S H
Sbjct: 543 VFQPGEVRPSRPKKKVVKKSEATAQKRSIH 572
>gi|225677646|gb|EEH15930.1| Poly(A) polymerase PAPa [Paracoccidioides brasiliensis Pb03]
gi|226295198|gb|EEH50618.1| Poly(A) polymerase pla1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/329 (46%), Positives = 219/329 (66%), Gaps = 8/329 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL VGP+H + E DFF + +L +M + +L PVPDA VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLVVGPKHVSFE-DFFSDFPPLLEQMAPKGAIEKLTPVPDAFVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + SG+SIDL+YARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL LVP+
Sbjct: 149 IKIELSGISIDLIYARLLVHSVPLNLDLKNKDLLRGLDEKEIRCVNGTRVTDEILELVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+
Sbjct: 209 QKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
QW WP PVLL IEEG L ++VW+P+ D+YHLMPIITPAYP M +++NVS ST +
Sbjct: 269 NQWNWPQPVLLKPIEEGPLQMKVWNPKIYHGDRYHLMPIITPAYPSMCATHNVSLSTKAV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGW 308
++ E +RG +I + + + + W+ LF TFF + YK YL I S+ + W G
Sbjct: 329 LLRELKRGGDIVDKIFLGQ--LTWNDLFTRHTFFSQDYKYYLSITSSSRGKEAQSVWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES+LR L ++R + ++ HP P F
Sbjct: 387 VESKLRHLVGALDRKS-SIEVAHPFPKGF 414
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 346 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNF 404
+Y++GL+ K P G DI + FK + + +PG+ + + HV +LP
Sbjct: 484 TTYYIGLELKPLAP-GAARSLDISTDTQIFKSTCTSWPQYQPGINDLHITHVRNYDLPED 542
Query: 405 VFPGG-VRPSRPSKGTWDSRRALERKVSSH 433
VF G VRPSRP K T +K S H
Sbjct: 543 VFQSGEVRPSRPKKKTLKKTEPTAQKRSIH 572
>gi|327357099|gb|EGE85956.1| Poly(A) polymerase PAPa [Ajellomyces dermatitidis ATCC 18188]
Length = 599
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/329 (46%), Positives = 219/329 (66%), Gaps = 8/329 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL VGP+H + E DFF + +L M + +L PVPDA VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLVVGPKHVSFE-DFFSDFPPVLENMAPLGAIEKLTPVPDAFVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + SG+SIDL+YARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL LVP+
Sbjct: 149 IKIELSGISIDLIYARLLVHSVPLNLDLKNKDLLRGLDEKEIRCVNGTRVTDEILELVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S +V +FFR+
Sbjct: 209 QKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSAIVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
QW+WP PVLL IEEG L ++VW+P+ DKYHLMPIITPAYP M +++NVS ST +
Sbjct: 269 NQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATHNVSLSTKAV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGW 308
++ E +RG +I + + + + W+ LF TFF + YK YL I ++ + D W G
Sbjct: 329 LLRELKRGGDIADRIFVGQ--LTWNDLFTRHTFFSQDYKYYLSITSASRSKDAQSVWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES+LR L ++R + ++ HP P F
Sbjct: 387 VESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 346 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNF 404
+Y++GL+ K VP G DI FK + + +PG+ I++ HV +LP+
Sbjct: 484 TTYYIGLEVKPLVP-GAARSLDISADTHIFKSTCTSWPQYQPGINDINITHVRNYDLPDD 542
Query: 405 VF-PGGVRPSRPSKGTWDSRRALERKVSSH 433
VF PG VRPSRP K A +K H
Sbjct: 543 VFQPGEVRPSRPKKKVVKKSEATAQKRRIH 572
>gi|342321329|gb|EGU13263.1| Endochitinase [Rhodotorula glutinis ATCC 204091]
Length = 703
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 197/515 (38%), Positives = 274/515 (53%), Gaps = 71/515 (13%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTL V PRH REE FF QML E V E+ VP+A VP
Sbjct: 83 IFTFGSYRLGVHGPGSDIDTLLVVPRHVEREE-FFSLFEQMLKETEGVLEVTGVPEAFVP 141
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K FSG+ IDLL+ARL++ +P+DLD+ D++L+N D++ +RSLNG RVTD++LRLVP
Sbjct: 142 IIKCTFSGIDIDLLFARLAVPTVPDDLDLKDDNLLRNIDDRCLRSLNGSRVTDEMLRLVP 201
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVS----- 183
+ FR LR ++ WA++R +Y NV GF GG+ WA+LVARICQLYP ++S
Sbjct: 202 DVPVFREALRTIKLWAQQRAIYGNVMGFCGGVAWAMLVARICQLYPKGCVGSIISRCVMC 261
Query: 184 ---------------RFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 228
RFF + QW+WP PVLL IEEG L ++VW+P+ P D+ H MPI
Sbjct: 262 FQLRHVRSSPTGSLRRFFIIMHQWQWPAPVLLKPIEEGPLQVRVWNPKLYPSDRSHRMPI 321
Query: 229 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 288
ITPAYP M S++NV+ ST +IM EF+R +I + + A W LF+P FF Y+
Sbjct: 322 ITPAYPSMCSTHNVTLSTQQIMTAEFKRAADIVDKVFVGSA--KWSELFQPHDFFSKYRY 379
Query: 289 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC-- 346
YL+I S+ +AD W G VESR+RQL +K+E + +L HP F + YC
Sbjct: 380 YLQITASSGSADVQLKWSGTVESRIRQLVMKLE-YVDTLLLAHPFVKSFDRVN---YCIN 435
Query: 347 -----------------------------------SYFMGLQRKQGVPVGEG--EQFDIR 369
++++GLQ ++ P G+ + DI
Sbjct: 436 EEEQRAVSIGEVPAAVDKRTEQDLIAGQGGTVYTTTFYIGLQIERK-PAGDKGPRKLDIS 494
Query: 370 LTVKEFKQAVSMYTLRKP-GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALER 428
EF + V M+ P M + V ++ LP +V G R P K R ++
Sbjct: 495 YPTNEFTKLVKMWDSYDPDSMGVIVRYIKSTALPAYVHAG--REPEPPKTGGVKRAKTKK 552
Query: 429 KVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 463
S+ A TDD+ HL N K A+
Sbjct: 553 ANGSNAATAASPALANAATDDSDAEHL-NKKHRAS 586
>gi|121700911|ref|XP_001268720.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
gi|119396863|gb|EAW07294.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
Length = 598
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 174/471 (36%), Positives = 263/471 (55%), Gaps = 70/471 (14%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL VGP+H + DFF + +L +M + ++ PVPDA VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLVVGPKHVLID-DFFSDFPPVLEKMAPPGAIEKMTPVPDAFVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + SG+SIDL++ARL + +P +LD+ + L+ DE+ VRSLNG RVTD+IL LVP+
Sbjct: 149 IKMELSGISIDLIFARLIVSSVPLNLDLKNNDYLRGLDEKEVRSLNGTRVTDEILELVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+
Sbjct: 209 QKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
+W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++NVS ST +
Sbjct: 269 NKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGW 308
++ E QRG +I + + + + W+ LF +FF + YK YL I S++ + W G
Sbjct: 329 ILRELQRGGDIVDKIFLKQ--MTWNDLFARHSFFTQDYKYYLSITASSKTKEAESVWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF------------------------------- 337
VES++R L ++R + HP P F
Sbjct: 387 VESKIRHLVGALDRKN-TIAVAHPFPKGFERVHLVSSEEEAEAVKNGSTKYQDKGTKTET 445
Query: 338 SDKSKPL--YCSYFMGLQRKQGVPVGEGEQ---------------------------FDI 368
+D++ + + G++ + PVG+ E DI
Sbjct: 446 TDETNDIAHQAAAQNGVENAEVEPVGQKENGDSRTIYTTTYYIGLELKPLEPGASRSLDI 505
Query: 369 RLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-PGGVRPSRPSK 417
+ FK + + +PG+ +++ HV +LP+ VF PG RP+RP K
Sbjct: 506 STDAQIFKSTCTSWAGYQPGINDLAITHVRNFDLPDDVFQPGETRPTRPKK 556
>gi|313243939|emb|CBY14824.1| unnamed protein product [Oikopleura dioica]
Length = 630
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 179/467 (38%), Positives = 259/467 (55%), Gaps = 23/467 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH DIDTLCV P+H TR FF ML + VTE + +A VP
Sbjct: 79 IYTFGSYRLGVHTSDGDIDTLCVVPQHVTRHH-FFTIFLDMLKKTEGVTECRDIREAFVP 137
Query: 69 VMKFKFSGVSIDLLYARLSL-WVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
++K F G+ +D+L+ARL+ +PED D+ IL+N +E+ VRSLNGCRVTD+IL LV
Sbjct: 138 LIKLYFDGIDMDILFARLANNSKVPEDQDLRNIEILRNLEEKCVRSLNGCRVTDEILHLV 197
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P I+ FR TLR ++ WA+R+G+Y N GF+GG+ WA+LVAR CQLYPNA PS L+ +FF
Sbjct: 198 PNIETFRLTLRAVKLWARRKGIYKNALGFIGGVCWAMLVARTCQLYPNAAPSTLLEKFFL 257
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
++++W WP PV L E+ G VWDPR NP D+ HLMPIITPAYP NS++NVS S
Sbjct: 258 LFSKWDWPKPVFLKVPEDAPPGFTHPVWDPRFNPLDRSHLMPIITPAYPHQNSTFNVSRS 317
Query: 246 TLRIMMDEFQRGHEICEAMEKNEADVD------WDTLFEPFTFFEAYKNYLRIDISAENA 299
TL +M E + +E + + + + D W LF FF YK+++ + +A+
Sbjct: 318 TLSVMKQEIKDAYETTKQILQKTPNPDEPNTRLWADLFTRTDFFNKYKHFIVLSATADQQ 377
Query: 300 DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLY-CSYFMGLQ 353
+ + W G VES +R+L +ER+ Y +L H + + P Y C +F+GL
Sbjct: 378 EQYQKWIGLVESNIRKLVNDLERNEY-ILIAHVNVDSIELDPAEEGQSPRYVCRWFLGLS 436
Query: 354 -RKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRP 412
+ V DI+ QA + P M++ +V R NL F+ P R
Sbjct: 437 FHRCEVKPNINLTSDIQRFTDLLHQAAISHNNYTPDMRVEARYVKRHNLVKFLTPELART 496
Query: 413 SRPSKGT--WDSRRALERKVSSHTKPGADDGRKRKQTDDN---VDTH 454
+ SK S+ + + + +TK + K Q+ +N ++TH
Sbjct: 497 LKLSKSKEGRKSKTNAQNQSNGNTKKAEESESKNSQSKENKEKLETH 543
>gi|403213836|emb|CCK68338.1| hypothetical protein KNAG_0A06840 [Kazachstania naganishii CBS
8797]
Length = 576
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 154/324 (47%), Positives = 216/324 (66%), Gaps = 14/324 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTL V P+H +R+ DFF ++L E PE+ E+ PVPDA VP
Sbjct: 84 VFTFGSYRLGVHGPGSDIDTLIVVPKHVSRD-DFFDVFDKLLRERPELDEIAPVPDAFVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K KFSGVSIDLL A+L + +P+ L +S ++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 143 IIKIKFSGVSIDLLCAKLDIAQVPKTLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K FR LR ++ WA+RR VY NV GF GG+ WA+LVARICQLYPNA +++++RFF++
Sbjct: 203 KPIVFRIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLVARICQLYPNACSAVIINRFFKI 262
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y+ W+WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP M +++N++ ST
Sbjct: 263 YSDWKWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKS 322
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISA--ENADDLR--- 303
I++ E QRG +I + N+ W+ LF+ FF YK YL I S DD
Sbjct: 323 IILQELQRGIQITNDIFTNKK--TWNDLFKRHDFFYKYKFYLTITASTREHTGDDGEKTG 380
Query: 304 ------NWKGWVESRLRQLTLKIE 321
W G VES+ R L +K+E
Sbjct: 381 GDEQHLKWSGLVESKARLLVMKLE 404
>gi|225561454|gb|EEH09734.1| poly(A) polymerase Pap [Ajellomyces capsulatus G186AR]
Length = 600
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 153/329 (46%), Positives = 219/329 (66%), Gaps = 8/329 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL VGP+H + E DFF + +L M + +L VPDA+VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLVVGPKHVSFE-DFFSDFPPILENMAPKGAIEKLTSVPDAYVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + SG+SIDL+YARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL LVP+
Sbjct: 149 IKIELSGISIDLIYARLLVHSVPPNLDLRNKDLLRGLDEKEIRCVNGTRVTDEILELVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S +V +FFR+
Sbjct: 209 QKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSAVVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
QW+WP PVLL IEEG L ++VW+P+ DKYHLMPIITPAYP M +++NVS ST +
Sbjct: 269 NQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATHNVSLSTKTV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGW 308
++ E +RG +I + + + + W+ LF TFF + YK YL I ++ + D W G
Sbjct: 329 LLRELKRGGDIADKIFVGQ--LSWNDLFTRHTFFSQDYKYYLNITSASRSKDAQSVWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES+LR L ++R + ++ HP P F
Sbjct: 387 VESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 66/143 (46%), Gaps = 22/143 (15%)
Query: 333 HPGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ- 390
HP DK LY + Y++GL+ K VP G DI FK + + +PG+
Sbjct: 472 HPN--GDKGCTLYTTTYYIGLELKPLVP-GASRSLDISADTHIFKSTCTSWAQYQPGIND 528
Query: 391 ISVAHVTRRNLPNFVF-PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD 449
+++ HV +LP VF PG VRPSRP K KV ++P A ++ D
Sbjct: 529 LNITHVRNYDLPEDVFQPGEVRPSRPKK-----------KVVKKSEPTAQ--KRNIHALD 575
Query: 450 NVDTHLRNAKCHAT---MPSSSG 469
N AK HA+ MPS++
Sbjct: 576 NEAPSENPAKRHASPNGMPSAAA 598
>gi|207343429|gb|EDZ70889.1| YKR002Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271932|gb|EEU06953.1| Pap1p [Saccharomyces cerevisiae JAY291]
Length = 568
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 166/375 (44%), Positives = 234/375 (62%), Gaps = 7/375 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTL V P+H TRE DFF +L E E+ E+ PVPDA VP
Sbjct: 84 IFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDSLLRERKELDEIAPVPDAFVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K KFSG+SIDL+ ARL +P L +S ++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 143 IIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K FR LR ++ WA+RR VY+N+ GF GG+ WA+LVARICQLYPNA +++++RFF +
Sbjct: 203 KPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFII 262
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++W WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP M +++N++ ST +
Sbjct: 263 LSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKK 322
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKG 307
+++ EF RG +I + N+ W LFE FF YK YL I +D+ W G
Sbjct: 323 VILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRYKFYLEITAYTRGSDEQHLKWSG 380
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKPLYCSYFMGLQRKQGVPVGEGEQF 366
VES++R L +K+E T + HP F S P Y M +Q K G E
Sbjct: 381 LVESKVRLLVMKLEVLT-GIKIAHPFTKPFESSYCCPTEDDYEM-IQDKYGSHKTETALN 438
Query: 367 DIRLTVKEFKQAVSM 381
++L E K+ S+
Sbjct: 439 ALKLVTDENKEEESI 453
>gi|325090895|gb|EGC44205.1| poly(A) polymerase Pap [Ajellomyces capsulatus H88]
Length = 594
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 153/329 (46%), Positives = 219/329 (66%), Gaps = 8/329 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL VGP+H + E DFF + +L M + +L VPDA+VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLVVGPKHVSFE-DFFSDFPPILENMAPKGAIEKLTSVPDAYVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + SG+SIDL+YARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL LVP+
Sbjct: 149 IKIELSGISIDLIYARLLVHSVPLNLDLRNKDLLRGLDEKEIRCVNGTRVTDEILELVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S +V +FFR+
Sbjct: 209 QKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSAIVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
QW+WP PVLL IEEG L ++VW+P+ DKYHLMPIITPAYP M +++NVS ST +
Sbjct: 269 NQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATHNVSLSTKTV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGW 308
++ E +RG +I + + + + W+ LF TFF + YK YL I ++ + D W G
Sbjct: 329 LLRELKRGGDIADKIFVGQ--LSWNDLFTRHTFFSQDYKYYLNITSASRSKDAQSVWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES+LR L ++R + ++ HP P F
Sbjct: 387 VESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 28/143 (19%)
Query: 333 HPGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ- 390
HP D LY + Y++GL+ K VP DI FK + + +PG+
Sbjct: 472 HPN--GDNGCTLYTTTYYIGLELKPLVP-------DISADTHIFKSTCTSWAQYQPGIND 522
Query: 391 ISVAHVTRRNLPNFVF-PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD 449
+++ HV +LP VF PG VRPSRP K KV ++P A ++ D
Sbjct: 523 LNITHVRNYDLPEDVFQPGEVRPSRPKK-----------KVVKKSEPTAQ--KRNIHALD 569
Query: 450 NVDTHLRNAKCHAT---MPSSSG 469
N AK HA+ MPS++
Sbjct: 570 NEAPSENPAKRHASPNGMPSAAA 592
>gi|154282671|ref|XP_001542131.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
gi|150410311|gb|EDN05699.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
Length = 594
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 153/329 (46%), Positives = 219/329 (66%), Gaps = 8/329 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL VGP+H + E DFF + +L M + +L VPDA+VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLVVGPKHVSFE-DFFSDFPPILENMAPKGAIEKLTSVPDAYVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + SG+SIDL+YARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL LVP+
Sbjct: 149 IKIELSGISIDLIYARLLVHSVPLNLDLRNKDLLRGLDEKEIRCVNGTRVTDEILELVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S +V +FFR+
Sbjct: 209 QKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSAIVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
QW+WP PVLL IEEG L ++VW+P+ DKYHLMPIITPAYP M +++NVS ST +
Sbjct: 269 NQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATHNVSLSTKTV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGW 308
++ E +RG +I + + + + W+ LF TFF + YK YL I ++ + D W G
Sbjct: 329 LLRELKRGGDIADKIFVGQ--LSWNDLFTRHTFFSQDYKYYLNITSASRSKDAQSVWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES+LR L ++R + ++ HP P F
Sbjct: 387 VESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 333 HPGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ- 390
HP D LY + Y++GL+ K VP DI FK + + +PG+
Sbjct: 472 HPN--GDNGCTLYTTTYYIGLELKPLVP-------DISADTHIFKSTCTSWAQYQPGIND 522
Query: 391 ISVAHVTRRNLPNFVF-PGGVRPSRPSK 417
+++ HV +LP VF PG VRPSRP K
Sbjct: 523 LNITHVRNYDLPEDVFQPGEVRPSRPKK 550
>gi|242773312|ref|XP_002478214.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
gi|218721833|gb|EED21251.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
Length = 599
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 152/329 (46%), Positives = 219/329 (66%), Gaps = 8/329 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL V P+H + DFF + +L M + ++ PVPDA VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLIVAPKHVLID-DFFSDFPPILERMSPPGAIEKMTPVPDAFVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K +FSG+S+DL++ARL L IP +LD+ + L+ D++ VRSLNG RVTDQIL LVP+
Sbjct: 149 IKLEFSGISLDLIFARLILPSIPLNLDLKNNDYLRGLDDKEVRSLNGTRVTDQILELVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+
Sbjct: 209 QKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
T+W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++N+S ST +
Sbjct: 269 TKWAWPQPVLLKPIEDGPLQIKVWNPKIYHTDRFHLMPIITPAYPSMCATHNISLSTKAV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGW 308
++ E QRG +I + + + + W+ LF TFF + YK YL+I S++ + W G
Sbjct: 329 ILRELQRGGDIVDKIFAKQ--LTWNDLFTRHTFFSKDYKYYLQITASSKTKEADSVWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES+LR L ++R + HP P F
Sbjct: 387 VESKLRHLVGALDRKNI-IAVAHPFPKGF 414
>gi|401624879|gb|EJS42918.1| pap1p [Saccharomyces arboricola H-6]
Length = 569
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 149/314 (47%), Positives = 214/314 (68%), Gaps = 4/314 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTL V P+H TRE DFF +L E E+ E+ PVPDA VP
Sbjct: 84 IFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDALLRERKELDEIAPVPDAFVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K KFSG+SIDL+ ARL +P+ L ++ ++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 143 IIKIKFSGISIDLICARLDQPQVPQSLTLADKNLLRNLDEKDLRALNGTRVTDEILELVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K FR LR ++ WA+RR VY+N+ GF GG+ WA+LVARICQLYPNA +++++RFF +
Sbjct: 203 KPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFII 262
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++W WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP M +++N++ ST +
Sbjct: 263 LSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKK 322
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKG 307
+++ EF+RG +I + N+ W LFE FF YK YL I +D+ W G
Sbjct: 323 VILKEFERGVQITNDIFSNKK--SWANLFEKNDFFYRYKFYLEITAYTRGSDEQHLKWGG 380
Query: 308 WVESRLRQLTLKIE 321
VES++R L +K+E
Sbjct: 381 LVESKVRLLIMKLE 394
>gi|71031845|ref|XP_765564.1| poly(A) polymerase [Theileria parva strain Muguga]
gi|68352521|gb|EAN33281.1| poly(A) polymerase, putative [Theileria parva]
Length = 507
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/411 (39%), Positives = 245/411 (59%), Gaps = 20/411 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L+ G + + P +DID LC+ PR TRE FF + + L ++ +++L VPDA+ P
Sbjct: 91 LLTFGSYRLGIVAPDSDIDVLCLCPRSVTRES-FFSDFYNTLNKVDGISKLQAVPDAYTP 149
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F +SID+L+A L + +++ D+IL+N ++ TVRS+NGCRV IL VP
Sbjct: 150 VIKLYFYDISIDILFANLDAPTVSPHINVLDDNILRNMNDSTVRSINGCRVASYILDSVP 209
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
FRTTLR ++ WA RR +YS V G+LGG+ WA+L AR+CQLYPN P+ L+ +FFRV
Sbjct: 210 NKNYFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARVCQLYPNCAPNQLIEKFFRV 269
Query: 189 YTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
Y+ W+W PV LC I+E G + +VWDPR NP+D++HLMPIITPA+P MNS++NV+
Sbjct: 270 YSVWQWECPVTLCKIKEPPNIPGLMSFKVWDPRVNPQDRHHLMPIITPAFPSMNSTHNVT 329
Query: 244 TSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR 303
+T R++ +E R EI + ++ W+ + E F YK++L I++ N
Sbjct: 330 ATTKRVITEELMRALEIFKTSNLTNVEL-WEKVLEEEDVFSNYKHFLVIEVYGSNEHVAH 388
Query: 304 N-WKGWVESRLRQLTLKIER--HTYNMLQCHPHPG--DFSDKSKPLYCSYFMGLQRKQGV 358
N W+GW+ SR+R L ++E +TY P PG F D + S F + GV
Sbjct: 389 NKWEGWIGSRMRFLISRLENLGNTY----IRPIPGFFKFEDDNWDYASSAFFAFKVISGV 444
Query: 359 PVGEGEQFDIRLTVKEFKQAVSMYT-LRKPGMQIS--VAHVTRRNLPNFVF 406
V + DIR +V+ FK ++ ++ + K QIS + H+ LP++V
Sbjct: 445 -VETSKTLDIRSSVQSFKDIINNWSDMEKYRDQISFNIKHLKNNQLPDYVL 494
>gi|221486493|gb|EEE24754.1| poly(A) polymerase, putative [Toxoplasma gondii GT1]
Length = 795
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/427 (41%), Positives = 251/427 (58%), Gaps = 37/427 (8%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V PG+DIDTLCV PRH +R+ FF L+ L + V++L PVPDA+ P
Sbjct: 290 IFTFGSYRLGVVTPGSDIDTLCVTPRHVSRDA-FFKILYAKLQQDARVSKLTPVPDAYTP 348
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLD-ISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
V+KF F GV IDLL+ARL L VIP + + D +L++ DE+T RS+NG RV D IL+LV
Sbjct: 349 VLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVDEKTARSVNGSRVADLILKLV 408
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P + F+ TLR ++ WAK RG+YSNV G+LGG++WA+LVAR CQLYPN PS LV RFF
Sbjct: 409 PNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVARCCQLYPNFAPSQLVHRFFT 468
Query: 188 VYTQWRWPN-PVLLCAIEE----GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 242
VY+ W W N PVLLC I+E G +VW+P+ N +D++HL+PIITPA+P MNS++NV
Sbjct: 469 VYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHLLPIITPAFPSMNSTHNV 528
Query: 243 STSTLRIMMDEFQRGHEICEAMEKNEADVDWD----TLFEPFTFFEAYKNYLRIDISAEN 298
S ST R++ +EF I + +K + ++ W + +P F ++K++L + + A+N
Sbjct: 529 SLSTKRVITEEFANAKRIFDIWDKKK-EISWTEALHLVLKPLD-FTSFKHFLELQVFAQN 586
Query: 299 ADDLRNWKGWVESRLRQLTLKIERHT----YNM----------LQCHPHPGDFSDKSKPL 344
R W GWVES++R L ++ER +N + P P FS +
Sbjct: 587 ETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFEAAMTVRPIPCTFSFQEPGW 646
Query: 345 YC--SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP---GMQISVAHVTRR 399
C S + L Q V D+R EF ++ + R +Q+ V H+ R
Sbjct: 647 ECASSMLVALNFAQQPCV-----IDLRPAAGEFVDLINQWPERAQLDGQIQLRVKHLRRS 701
Query: 400 NLPNFVF 406
LP +V
Sbjct: 702 QLPAYVL 708
>gi|302696569|ref|XP_003037963.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
gi|300111660|gb|EFJ03061.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
Length = 649
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 249/444 (56%), Gaps = 43/444 (9%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH P +DIDTLCV P+H +RE DFF ML E P+VTE+ +P+A+VP++K
Sbjct: 90 FGSYRLGVHTPESDIDTLCVVPKHVSRE-DFFDVFEPMLRESPDVTEVAGIPEAYVPIIK 148
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
K G+ ID+L ARL+L IPEDL + +IL+N D++ VRSLNG RVTD++LRLVP +
Sbjct: 149 IKMFGIPIDILMARLALSSIPEDLSLQDSNILRNLDDRCVRSLNGYRVTDELLRLVPNVD 208
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
FR LRC++ WA+R+ +YSNV GF GG+ WA+LVAR+CQLYPNA +V RFF + Q
Sbjct: 209 VFRDALRCIKLWAQRKAIYSNVNGFPGGVAWAMLVARVCQLYPNANAGTVVGRFFPIMHQ 268
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W WP PV+L +++ +G + W+P+ P D+ H MP+ITP YP M +++NVS ST I+
Sbjct: 269 WPWPAPVILKHVDDLQMGQRSWNPKLFPGDRAHRMPVITPVYPAMCATHNVSVSTFAIIE 328
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
+E +RG ++ ++ + W LFE FF Y+ +L+I S +A+ W VE+
Sbjct: 329 EELRRGTKLMNSIILGSS--KWSELFEKHDFFHKYRYFLQIIASTASAEAQLMWAPNVEA 386
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSD-------------------------------- 339
++RQL K+E ++ HP F
Sbjct: 387 KIRQLVSKLEL-VESLTLAHPFTKGFEQVFYCMNDDEIRSVAQGEVPDVIARRRPQDIEG 445
Query: 340 ---KSKPLYCSYFMGLQRKQGVPVGE--GEQFDIRLTVKEFKQAVSMYT-LRKPGMQISV 393
SK ++++GL + PVG + DI EF + M+ + M + V
Sbjct: 446 VESGSKVYSTTFYIGLA-IEPRPVGAIGTRRLDISYPTTEFTKVAKMWERFDEATMGLVV 504
Query: 394 AHVTRRNLPNFVFPGGVRPSRPSK 417
H+ LP++VF G R R ++
Sbjct: 505 RHIKSSALPDYVFEPGERQPRSAQ 528
>gi|212531585|ref|XP_002145949.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
gi|210071313|gb|EEA25402.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
Length = 599
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/329 (45%), Positives = 218/329 (66%), Gaps = 8/329 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL V P+H + DFF + +L M + ++ PVPDA VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLIVAPKHVMID-DFFSDFPPILERMSPPGAIEKMTPVPDAFVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K +FSG+SIDL++ARL L +P +LD+ + L+ D++ VRSLNG RVTDQIL LVP+
Sbjct: 149 IKLEFSGISIDLIFARLILPSVPLNLDLKNNDYLRGLDDKEVRSLNGTRVTDQILELVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+
Sbjct: 209 QKTFRIALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
T+W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++N+S ST +
Sbjct: 269 TKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCATHNISLSTKAV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRNWKGW 308
++ E QRG ++ + + + + W+ LF TFF YK YL+I S++ + W G
Sbjct: 329 ILRELQRGGDMVDKIFAKQ--LTWNDLFTRHTFFSKDYKYYLQITASSKTKEAESVWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES+LR L ++R + HP P F
Sbjct: 387 VESKLRHLVGALDRKNIIAI-AHPFPKGF 414
>gi|221508263|gb|EEE33850.1| poly(A) polymerase, putative [Toxoplasma gondii VEG]
Length = 778
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/427 (41%), Positives = 251/427 (58%), Gaps = 37/427 (8%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V PG+DIDTLCV PRH +R+ FF L+ L + V++L PVPDA+ P
Sbjct: 271 IFTFGSYRLGVVTPGSDIDTLCVTPRHVSRDA-FFKILYAKLQQDARVSKLTPVPDAYTP 329
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLD-ISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
V+KF F GV IDLL+ARL L VIP + + D +L++ DE+T RS+NG RV D IL+LV
Sbjct: 330 VLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVDEKTARSVNGSRVADLILKLV 389
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P + F+ TLR ++ WAK RG+YSNV G+LGG++WA+LVAR CQLYPN PS LV RFF
Sbjct: 390 PNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVARCCQLYPNFAPSQLVHRFFT 449
Query: 188 VYTQWRWPN-PVLLCAIEE----GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 242
VY+ W W N PVLLC I+E G +VW+P+ N +D++HL+PIITPA+P MNS++NV
Sbjct: 450 VYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHLLPIITPAFPSMNSTHNV 509
Query: 243 STSTLRIMMDEFQRGHEICEAMEKNEADVDWD----TLFEPFTFFEAYKNYLRIDISAEN 298
S ST R++ +EF I + +K + ++ W + +P F ++K++L + + A+N
Sbjct: 510 SLSTKRVITEEFANAKRIFDIWDKKK-EISWTEALHLVLKPLD-FTSFKHFLELQVFAQN 567
Query: 299 ADDLRNWKGWVESRLRQLTLKIERHT----YNM----------LQCHPHPGDFSDKSKPL 344
R W GWVES++R L ++ER +N + P P FS +
Sbjct: 568 ETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFEAAMTVRPIPCTFSFQEPGW 627
Query: 345 YC--SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP---GMQISVAHVTRR 399
C S + L Q V D+R EF ++ + R +Q+ V H+ R
Sbjct: 628 ECASSMLVALNFAQQPCV-----IDLRPAAGEFVDLINQWPERAQLDGQIQLRVKHLRRS 682
Query: 400 NLPNFVF 406
LP +V
Sbjct: 683 QLPAYVL 689
>gi|237833947|ref|XP_002366271.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
gi|211963935|gb|EEA99130.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
Length = 811
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/427 (41%), Positives = 251/427 (58%), Gaps = 37/427 (8%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V PG+DIDTLCV PRH +R+ FF L+ L + V++L PVPDA+ P
Sbjct: 301 IFTFGSYRLGVVTPGSDIDTLCVTPRHVSRDA-FFKILYAKLQQDARVSKLTPVPDAYTP 359
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLD-ISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
V+KF F GV IDLL+ARL L VIP + + D +L++ DE+T RS+NG RV D IL+LV
Sbjct: 360 VLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVDEKTARSVNGSRVADLILKLV 419
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P + F+ TLR ++ WAK RG+YSNV G+LGG++WA+LVAR CQLYPN PS LV RFF
Sbjct: 420 PNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVARCCQLYPNFAPSQLVHRFFT 479
Query: 188 VYTQWRWPN-PVLLCAIEE----GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 242
VY+ W W N PVLLC I+E G +VW+P+ N +D++HL+PIITPA+P MNS++NV
Sbjct: 480 VYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHLLPIITPAFPSMNSTHNV 539
Query: 243 STSTLRIMMDEFQRGHEICEAMEKNEADVDWD----TLFEPFTFFEAYKNYLRIDISAEN 298
S ST R++ +EF I + +K + ++ W + +P F ++K++L + + A+N
Sbjct: 540 SLSTKRVITEEFANAKRIFDIWDKKK-EISWTEALHLVLKPLD-FTSFKHFLELQVFAQN 597
Query: 299 ADDLRNWKGWVESRLRQLTLKIERHT----YNM----------LQCHPHPGDFSDKSKPL 344
R W GWVES++R L ++ER +N + P P FS +
Sbjct: 598 ETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFEAAMTVRPIPCTFSFQEPGW 657
Query: 345 YC--SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP---GMQISVAHVTRR 399
C S + L Q V D+R EF ++ + R +Q+ V H+ R
Sbjct: 658 ECASSMLVALNFAQQPCV-----IDLRPAAGEFVDLINQWPERAQLDGQIQLRVKHLRRS 712
Query: 400 NLPNFVF 406
LP +V
Sbjct: 713 QLPAYVL 719
>gi|328351170|emb|CCA37570.1| poly(A) polymerase [Komagataella pastoris CBS 7435]
Length = 908
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 152/330 (46%), Positives = 218/330 (66%), Gaps = 5/330 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+GPG+DIDTL V P+H RE DFF ++L + PE+ E+ VPDA VP
Sbjct: 439 IFTFGSYRLGVYGPGSDIDTLVVFPKHINRE-DFFTVFEKILRQRPELEEIQSVPDAFVP 497
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +F G+SIDL+ ARL + +P +L + ++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 498 IIKMEFDGISIDLICARLDIPRVPLNLTLDDKNLLKNIDEKDLRALNGTRVTDEILLLVP 557
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ F+ LR ++ WA+RR VY NV GF GG+ WA+LVARICQLYPNAV ++++S+FF +
Sbjct: 558 QPTVFKHALRAIKIWAQRRAVYGNVFGFPGGVAWAMLVARICQLYPNAVSAVIISKFFVI 617
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QW WP PVLL IE+G L ++VW+PR P DKYH MP+ITPAYP M +++N++ ST +
Sbjct: 618 LGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDKYHKMPVITPAYPSMCATHNITESTKK 677
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAE-NADDLRNWKG 307
+++ EFQRG I E W LF FF YK YL + + + ++++ + + G
Sbjct: 678 VILQEFQRGSGIV--TEIFSGAKKWSDLFTKHDFFRRYKFYLTVIAATKGSSEEQKKFAG 735
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES+LR L K+E + N+ HP F
Sbjct: 736 MVESKLRLLVQKLENNE-NINLAHPFVKTF 764
>gi|325190732|emb|CCA25225.1| predicted protein putative [Albugo laibachii Nc14]
Length = 539
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/457 (36%), Positives = 256/457 (56%), Gaps = 13/457 (2%)
Query: 3 RYLPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPV 62
+ L + L G + H P ADID LC+ PRH TR + FF +L +L V++LH +
Sbjct: 76 KKLRIQLKTFGSYRLGCHHPDADIDVLCLAPRHCTRVK-FFQKLPILLEVSSFVSDLHVI 134
Query: 63 PDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQ 122
P+A VPV+KFK G+++D+L++ L L IPE ++I D L D+ +VRSLNGCRVT++
Sbjct: 135 PNAFVPVIKFKVDGIAVDMLFSCLYLESIPEHINILDDQFLNGLDDVSVRSLNGCRVTEK 194
Query: 123 ILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLV 182
IL+L+ + FR TL +++WA+ RG+YSNV GFLGG+N A++ A++CQLYP+A+P L+
Sbjct: 195 ILQLISHQEYFRITLTAIKYWARNRGIYSNVLGFLGGVNLAIMAAKVCQLYPDALPPTLL 254
Query: 183 SRFFRVYTQWRWPNPVLLC-AIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYN 241
+FF +Y W WPNP+ + I LG W+P+ PKD+ HLMPIITP YP +NSSYN
Sbjct: 255 IKFFHLYHLWNWPNPLSITPCINPLQLGFPSWNPKVYPKDRLHLMPIITPCYPSINSSYN 314
Query: 242 VSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD 301
V +STL +M EF+ + + W L +FF+ Y+++L++ IS+E+ +D
Sbjct: 315 VMSSTLDVMKTEFKNAS--LQVSNVRAKVLSWSELLTEASFFDKYRHFLQVQISSEDEED 372
Query: 302 LRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYF---MGLQRKQGV 358
W WVESRLR +++E + ++ +F + K Y S+F + QR +
Sbjct: 373 FGRWVTWVESRLRTFFIRLEAIPFVRIRPFARFFNFQEL-KGAYISWFFVALDFQRPEDK 431
Query: 359 PVGEGE---QFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRP 415
E D V+ F V + R M + V HV R +P +V R
Sbjct: 432 RQNAQEPELTIDFSDAVRAFANHVDQWEERNSTMDLEVKHVVRSQIPAWVIDATYRNFAT 491
Query: 416 SKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVD 452
KG R+A + + S+ T + D +++
Sbjct: 492 VKGL--IRKAEQYRYSAATPANGEATSSSNFCDSDIE 526
>gi|323308211|gb|EGA61460.1| Pap1p [Saccharomyces cerevisiae FostersO]
Length = 568
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 150/314 (47%), Positives = 212/314 (67%), Gaps = 4/314 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTL V P+H TRE DFF +L E E+ E+ PVPDA VP
Sbjct: 84 IFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDSLLRERKELDEIAPVPDAFVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K KFSG+SIDL+ ARL +P L +S ++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 143 IIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K FR LR ++ WA+RR VY+N+ GF GG+ WA+LVARICQLYPNA +++++RFF +
Sbjct: 203 KPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFII 262
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++W WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP M +++N++ ST +
Sbjct: 263 LSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKK 322
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKG 307
+++ EF RG +I + N+ W LFE FF YK YL I +D+ W G
Sbjct: 323 VILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRYKFYLEITAYTRGSDEQHLKWSG 380
Query: 308 WVESRLRQLTLKIE 321
VES++R L +K+E
Sbjct: 381 LVESKVRLLVMKLE 394
>gi|358370159|dbj|GAA86771.1| poly(A) polymerase Pap [Aspergillus kawachii IFO 4308]
Length = 598
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/329 (45%), Positives = 218/329 (66%), Gaps = 8/329 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE---VTELHPVPDAHVPV 69
G + V+GPG+DIDTL VGP+H + DFF + +L +M + ++ PVPDA+VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLVVGPKHVIID-DFFSDFPPILEKMAAPGAIEKMTPVPDAYVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + SG+SIDL++ARL + IP +LD+ + L+ DE+ VRSLNG RVTD+IL LVP+
Sbjct: 149 IKLELSGISIDLIFARLIIPSIPMNLDLKNNDYLRGLDEREVRSLNGTRVTDEILELVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+
Sbjct: 209 QKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
+W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++NVS ST +
Sbjct: 269 NKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGW 308
++ E QRG +I + + + + W+ LF TFF + YK YL I S+ + W G
Sbjct: 329 ILRELQRGGDIVDKIFLKQ--LRWEDLFARHTFFTKDYKYYLSITASSRTKEAESVWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES++R L ++R + HP P F
Sbjct: 387 VESKIRHLVGALDRKA-TIAIAHPFPKGF 414
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 346 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNF 404
+Y++GL+ K P G DI + FK + + +PG+ +++ HV +LP
Sbjct: 484 TTYYIGLELKPLEP-GASRSLDISTDAQIFKSTCTSWPGYQPGINDLAITHVRNFDLPED 542
Query: 405 VF-PGGVRPSRPSK 417
VF PG RP+RP K
Sbjct: 543 VFQPGETRPTRPKK 556
>gi|398364849|ref|NP_012927.3| Pap1p [Saccharomyces cerevisiae S288c]
gi|266739|sp|P29468.1|PAP_YEAST RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|3527|emb|CAA46250.1| polyA polymerase 1 [Saccharomyces cerevisiae]
gi|4099|emb|CAA42852.1| poly(A)polymerase [Saccharomyces cerevisiae]
gi|486407|emb|CAA82072.1| PAP1 [Saccharomyces cerevisiae]
gi|151941547|gb|EDN59910.1| poly(A) polymerase [Saccharomyces cerevisiae YJM789]
gi|190409824|gb|EDV13089.1| poly(A) polymerase [Saccharomyces cerevisiae RM11-1a]
gi|259147834|emb|CAY81084.1| Pap1p [Saccharomyces cerevisiae EC1118]
gi|285813261|tpg|DAA09158.1| TPA: Pap1p [Saccharomyces cerevisiae S288c]
gi|323304127|gb|EGA57905.1| Pap1p [Saccharomyces cerevisiae FostersB]
gi|349579565|dbj|GAA24727.1| K7_Pap1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298143|gb|EIW09241.1| Pap1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|228305|prf||1802393A poly(A) polymerase
Length = 568
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 150/314 (47%), Positives = 212/314 (67%), Gaps = 4/314 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTL V P+H TRE DFF +L E E+ E+ PVPDA VP
Sbjct: 84 IFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDSLLRERKELDEIAPVPDAFVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K KFSG+SIDL+ ARL +P L +S ++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 143 IIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K FR LR ++ WA+RR VY+N+ GF GG+ WA+LVARICQLYPNA +++++RFF +
Sbjct: 203 KPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFII 262
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++W WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP M +++N++ ST +
Sbjct: 263 LSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKK 322
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKG 307
+++ EF RG +I + N+ W LFE FF YK YL I +D+ W G
Sbjct: 323 VILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRYKFYLEITAYTRGSDEQHLKWSG 380
Query: 308 WVESRLRQLTLKIE 321
VES++R L +K+E
Sbjct: 381 LVESKVRLLVMKLE 394
>gi|4062995|dbj|BAA36217.1| poly(A) polymerase isozyme [Candida albicans]
Length = 555
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/340 (45%), Positives = 225/340 (66%), Gaps = 10/340 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+GPG+DIDTL V P+H +R DFF +++L E+ E+ PVPDA VP
Sbjct: 83 IFTFGSYRLGVYGPGSDIDTLVVVPKHVSRN-DFFEVFYELLKGRSELEEIAPVPDAFVP 141
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +F+G+SIDL++ARL + +P DL + ++L+N DE+ +R+LNG RVTD+IL+LVP
Sbjct: 142 IIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNIDEKDLRALNGTRVTDEILQLVP 201
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K F+ LRC++ WA++R VY N+ GF GG+ WA+LVARICQLYPNAV +++V +FF +
Sbjct: 202 KPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSAVIVEKFFHI 261
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y+QW WP PVLL IE+G L ++VW+PR D+ H MP+ITPAYP M +++N+++ST +
Sbjct: 262 YSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITPAYPSMCATHNITSSTQK 321
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAEN--ADDLRNWK 306
+++ EFQRG E+ + N W L E FF YK YL I + + A+ L+ +
Sbjct: 322 VILSEFQRGIELMNDI--NVGKKSWSDLLERHDFFFRYKFYLCIVAATRSTYAEHLK-YS 378
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 346
G VES+LR L K+E + HP+ F + YC
Sbjct: 379 GMVESKLRLLVQKLEL-VEGIELAHPYVKSFENG---YYC 414
>gi|68482965|ref|XP_714613.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
gi|62900711|sp|Q9UW26.1|PAPA_CANAL RecName: Full=Poly(A) polymerase PAPa; AltName: Full=Polynucleotide
adenylyltransferase a
gi|5771506|gb|AAD51407.1| PAPa [Candida albicans]
gi|46436196|gb|EAK95563.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
Length = 555
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/340 (45%), Positives = 225/340 (66%), Gaps = 10/340 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+GPG+DIDTL V P+H +R DFF +++L E+ E+ PVPDA VP
Sbjct: 83 IFTFGSYRLGVYGPGSDIDTLVVVPKHVSRN-DFFEVFYELLKGRSELEEIAPVPDAFVP 141
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +F+G+SIDL++ARL + +P DL + ++L+N DE+ +R+LNG RVTD+IL+LVP
Sbjct: 142 IIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNIDEKDLRALNGTRVTDEILQLVP 201
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K F+ LRC++ WA++R VY N+ GF GG+ WA+LVARICQLYPNAV +++V +FF +
Sbjct: 202 KPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSAVIVEKFFHI 261
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y+QW WP PVLL IE+G L ++VW+PR D+ H MP+ITPAYP M +++N+++ST +
Sbjct: 262 YSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITPAYPSMCATHNITSSTQK 321
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAEN--ADDLRNWK 306
+++ EFQRG E+ + N W L E FF YK YL I + + A+ L+ +
Sbjct: 322 VILSEFQRGIELMNDI--NVGKKSWSDLLERHDFFFRYKFYLCIVAATRSTYAEHLK-YS 378
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 346
G VES+LR L K+E + HP+ F + YC
Sbjct: 379 GMVESKLRLLVQKLEL-VEGIELAHPYVKSFENG---YYC 414
>gi|258563094|ref|XP_002582292.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
gi|237907799|gb|EEP82200.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
Length = 616
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 149/333 (44%), Positives = 217/333 (65%), Gaps = 8/333 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDA 65
+ G + V+GPG+DIDTL VGP+H TRE DFF + L ++ + +L VPDA
Sbjct: 103 IFTFGSYRLGVYGPGSDIDTLVVGPKHVTRE-DFFADFPSTLEQLAPKDSIEKLTSVPDA 161
Query: 66 HVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILR 125
VP+MK + SG+SIDL++ARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL
Sbjct: 162 FVPIMKLELSGISIDLIFARLVVHSVPLNLDLKNKELLRGLDERELRCVNGTRVTDEILE 221
Query: 126 LVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRF 185
LVP+ + FR LR ++ WA+ R +YSNV GF GG+ WA+LVAR+CQLYP A S+++ +F
Sbjct: 222 LVPQQKTFRLALRAIKLWAQSRAIYSNVVGFPGGVAWAMLVARVCQLYPQATGSVIIGKF 281
Query: 186 FRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
FR+ QW WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++N+S S
Sbjct: 282 FRIMNQWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNISLS 341
Query: 246 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRN 304
T +++ E +RG +I + + + + W LF +FF YK YL I S+ +
Sbjct: 342 TKAVILRELKRGGDIVDKIFMGQ--LRWSDLFAKHSFFSKDYKYYLSITASSTTKEAQSV 399
Query: 305 WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 337
W G VES+LR L L ++R + ++ HP P F
Sbjct: 400 WSGLVESKLRHLVLALDRKS-SIEVAHPFPKGF 431
>gi|425765475|gb|EKV04155.1| Poly(A) polymerase Pap [Penicillium digitatum Pd1]
gi|425778347|gb|EKV16478.1| Poly(A) polymerase Pap [Penicillium digitatum PHI26]
Length = 597
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/329 (45%), Positives = 214/329 (65%), Gaps = 8/329 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE---VTELHPVPDAHVPV 69
G + V+GPG+DIDTL VGP+H + DFF E +L M + ++ PVPDA VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLVVGPKHVLID-DFFAEFPPILQRMASEGAIEKMTPVPDAFVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + G+SIDL++ARL + IP +LD+ + L+ DE+ VRSLNG RVTD+IL LVP+
Sbjct: 149 IKLELCGISIDLIFARLVIPAIPMNLDLKNNDYLRGLDEREVRSLNGTRVTDEILELVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+
Sbjct: 209 QKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
+W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++N+S ST +
Sbjct: 269 NKWNWPQPVLLKQIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCATHNISMSTKAV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGW 308
++ E QRG +I + + + + W LF TFF YK YL I S++ + W G
Sbjct: 329 ILRELQRGGDIVDKIFMKQ--LSWQDLFARHTFFTHDYKYYLSITASSKTKEAESVWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES+LR L ++R + HP P F
Sbjct: 387 VESKLRHLVGALDRKPIVAV-AHPFPKGF 414
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Query: 335 GDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT-LRKPGMQIS 392
G + + +Y + Y++GL+ K P G+ DI + FK + + ++ M+++
Sbjct: 477 GTVDNDGQTVYTTTYYIGLELKPLEP-GQSRSLDISTDSQIFKSTCTSWPGYQEEVMELA 535
Query: 393 VAHVTRRNLPNFVF-PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQT 447
V HV +LP+ VF PG R SRP K A +K S G+ +G ++Q
Sbjct: 536 VTHVRSFDLPDDVFQPGETRASRPKKKVTKRSEAAGQKRSIGELDGSTEGAAKRQV 591
>gi|444321773|ref|XP_004181542.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
gi|387514587|emb|CCH62023.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
Length = 574
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 147/314 (46%), Positives = 215/314 (68%), Gaps = 4/314 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTL V P+H +R+ DFF ++L E+ E+ PVPDA VP
Sbjct: 84 VFTFGSYRLGVHGPGSDIDTLIVVPKHVSRD-DFFTIFAELLRGREEIEEIAPVPDAFVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +FSG+SIDLL ARL L IP L +S ++L+N DE+ +R++NG RVTD+IL LVP
Sbjct: 143 IIKTQFSGISIDLLCARLDLAQIPLSLTLSDKNLLRNLDEKDLRAINGTRVTDEILELVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K FR LR ++ WA RR +Y+NV GF GG+ WA+LVARICQLYPNA +++++RFF++
Sbjct: 203 KPNVFRIALRAVKIWAPRRAIYANVFGFPGGVAWAMLVARICQLYPNACSAVILNRFFKI 262
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+W+WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP M +++N++ ST +
Sbjct: 263 LLEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITDSTKK 322
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKG 307
+++ EF+RG ++ + N+ W LF+ FF YK YL + S + + W G
Sbjct: 323 VILQEFERGVQVTNDIFTNKK--TWADLFKKHEFFHKYKFYLTVVASTRGSTEQHLKWSG 380
Query: 308 WVESRLRQLTLKIE 321
+VES+LR L LK+E
Sbjct: 381 FVESKLRLLVLKLE 394
>gi|254567353|ref|XP_002490787.1| Poly(A) polymerase [Komagataella pastoris GS115]
gi|238030583|emb|CAY68507.1| Poly(A) polymerase [Komagataella pastoris GS115]
Length = 551
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 152/330 (46%), Positives = 218/330 (66%), Gaps = 5/330 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+GPG+DIDTL V P+H RE DFF ++L + PE+ E+ VPDA VP
Sbjct: 82 IFTFGSYRLGVYGPGSDIDTLVVFPKHINRE-DFFTVFEKILRQRPELEEIQSVPDAFVP 140
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +F G+SIDL+ ARL + +P +L + ++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 141 IIKMEFDGISIDLICARLDIPRVPLNLTLDDKNLLKNIDEKDLRALNGTRVTDEILLLVP 200
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ F+ LR ++ WA+RR VY NV GF GG+ WA+LVARICQLYPNAV ++++S+FF +
Sbjct: 201 QPTVFKHALRAIKIWAQRRAVYGNVFGFPGGVAWAMLVARICQLYPNAVSAVIISKFFVI 260
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QW WP PVLL IE+G L ++VW+PR P DKYH MP+ITPAYP M +++N++ ST +
Sbjct: 261 LGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDKYHKMPVITPAYPSMCATHNITESTKK 320
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAE-NADDLRNWKG 307
+++ EFQRG I E W LF FF YK YL + + + ++++ + + G
Sbjct: 321 VILQEFQRGSGIV--TEIFSGAKKWSDLFTKHDFFRRYKFYLTVIAATKGSSEEQKKFAG 378
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES+LR L K+E + N+ HP F
Sbjct: 379 MVESKLRLLVQKLENNE-NINLAHPFVKTF 407
>gi|84999896|ref|XP_954669.1| polyA polymerase [Theileria annulata]
gi|65305664|emb|CAI73989.1| polyA polymerase, putative [Theileria annulata]
Length = 512
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/410 (39%), Positives = 244/410 (59%), Gaps = 19/410 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L+ G + + P +DID LC+ PR TRE FF + + LT++ +++L PVPDA+ P
Sbjct: 91 LLTFGSYRLGIVAPDSDIDVLCLCPRSVTRES-FFSDFYNTLTKVEGISKLQPVPDAYTP 149
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F +SID+L+A L + +++ D+IL+N ++ TVRS+NGCRV IL VP
Sbjct: 150 VIKLYFYEISIDILFANLDAPTVSPHINVLDDNILRNMNDSTVRSINGCRVASYILDSVP 209
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
FRTTLR ++ WA RR +YS V G+LGG+ WA+L AR+CQLYPN P+ L+ +FFRV
Sbjct: 210 NKNYFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARVCQLYPNCAPNQLIEKFFRV 269
Query: 189 YTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
++ W+W PV LC I+E G + +VWDPR NP+D++HLMPIITPA+P MNS++NV+
Sbjct: 270 FSVWQWECPVTLCKIKEPPNIPGLMSFKVWDPRVNPQDRHHLMPIITPAFPSMNSTHNVT 329
Query: 244 TSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR 303
+T +++ +E R EI + + ++ W+ + E F YK++L I++
Sbjct: 330 ATTKKVITEELMRALEIFKTPNLSNLEL-WEKVLEEQDVFSNYKHFLVIEVYGSTEHAHG 388
Query: 304 NWKGWVESRLRQLTLKIERHTYNMLQCH--PHPG--DFSDKSKPLYCSYFMGLQRKQGVP 359
W+GW+ SR+R L ++E N+ H P PG F D + S F + GV
Sbjct: 389 KWEGWIGSRMRFLISRLE----NLGNTHIRPIPGFFKFEDDNWDYASSAFFAFKVISGV- 443
Query: 360 VGEGEQFDIRLTVKEFKQAVSMYT-LRKPGMQIS--VAHVTRRNLPNFVF 406
+ DIR V+ FK ++ ++ + K QIS + H+ LP++V
Sbjct: 444 AENSKTLDIRSAVQSFKDIINNWSDMEKYRDQISFNIKHLKNNQLPDYVL 493
>gi|448531596|ref|XP_003870285.1| Pap1 poly(A) polymerase [Candida orthopsilosis Co 90-125]
gi|380354639|emb|CCG24155.1| Pap1 poly(A) polymerase [Candida orthopsilosis]
Length = 557
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 153/339 (45%), Positives = 224/339 (66%), Gaps = 8/339 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+GP +DID L V PRH TRE DFF ++L PE+ E++ V +A VP
Sbjct: 88 IFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTVFEKILRGRPELEEINSVKEAFVP 146
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +F+G+SIDLL+A+L + +P DL + ++L+N DE+ +R+LNG RVTD+ILRLVP
Sbjct: 147 IIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEKDMRALNGTRVTDEILRLVP 206
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K F+ LR ++ WA++R VY+NV GF GG+ WA+LVARICQLYPNAV ++++ +FF++
Sbjct: 207 KPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVARICQLYPNAVSAVILEKFFQI 266
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y+QW WP PVLL IE+G L ++VW+PR D+ H MP+ITPAYP M +++N++ ST +
Sbjct: 267 YSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPAYPSMCATHNITNSTQK 326
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-RIDISAENADDLRNWKG 307
I+M+EF RG EI + + W L E +FF YK YL + + NA++ + G
Sbjct: 327 IIMNEFNRGVEIIGEIFTGQK--VWSHLLERHSFFHQYKFYLCVVAATKSNAEEHLKYSG 384
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 346
VES+LR L K+E+ + HP+ F + YC
Sbjct: 385 MVESKLRLLVQKLEQ-VDGVELAHPYVKSFEN---AYYC 419
>gi|317140350|ref|XP_001818141.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
gi|391870730|gb|EIT79906.1| poly(A) polymerase [Aspergillus oryzae 3.042]
Length = 599
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 153/329 (46%), Positives = 218/329 (66%), Gaps = 8/329 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM-PE--VTELHPVPDAHVPV 69
G + V+GPG+DIDTL VGP+H + DFF + +L M P+ V ++ PVPDA VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLIVGPKHVVID-DFFSDFPPVLERMAPQGAVEKMTPVPDAFVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K +FSG+SIDL+YARL + +P +LD+ + L+ DE+ VRSLNG RVTD+IL LVP+
Sbjct: 149 IKLEFSGISIDLIYARLIVPSVPLNLDLKNNDYLRGLDEKEVRSLNGTRVTDEILELVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+
Sbjct: 209 QKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
+W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++NVS ST +
Sbjct: 269 NKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMSTKTV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGW 308
++ E QRG +I + + + W+ LF +FF YK YL I S+ + W G
Sbjct: 329 ILRELQRGGDIVDKIFLKQN--TWNDLFARHSFFTRDYKYYLSITASSRTKEAEAVWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES++R L ++R + + HP P F
Sbjct: 387 VESKIRHLVGALDRKS-TIAVAHPFPKGF 414
>gi|238484201|ref|XP_002373339.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
gi|83765996|dbj|BAE56139.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701389|gb|EED57727.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
Length = 609
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 153/329 (46%), Positives = 218/329 (66%), Gaps = 8/329 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM-PE--VTELHPVPDAHVPV 69
G + V+GPG+DIDTL VGP+H + DFF + +L M P+ V ++ PVPDA VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLIVGPKHVVID-DFFSDFPPVLERMAPQGAVEKMTPVPDAFVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K +FSG+SIDL+YARL + +P +LD+ + L+ DE+ VRSLNG RVTD+IL LVP+
Sbjct: 149 IKLEFSGISIDLIYARLIVPSVPLNLDLKNNDYLRGLDEKEVRSLNGTRVTDEILELVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+
Sbjct: 209 QKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
+W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++NVS ST +
Sbjct: 269 NKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMSTKTV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGW 308
++ E QRG +I + + + W+ LF +FF YK YL I S+ + W G
Sbjct: 329 ILRELQRGGDIVDKIFLKQN--TWNDLFARHSFFTRDYKYYLSITASSRTKEAEAVWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES++R L ++R + + HP P F
Sbjct: 387 VESKIRHLVGALDRKS-TIAVAHPFPKGF 414
>gi|308510522|ref|XP_003117444.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
gi|308242358|gb|EFO86310.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
Length = 513
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 171/442 (38%), Positives = 252/442 (57%), Gaps = 31/442 (7%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
LI G + VH G+DIDTL + PRH TR DF E A VP
Sbjct: 84 LIAFGSYRLGVHSSGSDIDTLVLAPRHVTRL-DFILENFT----------------AFVP 126
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+M FK+SG+ IDLL+ARL + +P+++D+S D+IL+N D ++VRSLNGCRV +Q+L+ VP
Sbjct: 127 IMTFKYSGIDIDLLFARLDMPTVPDNIDLSDDNILKNLDPESVRSLNGCRVAEQLLKQVP 186
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
F TLR ++ WAK G+YSN GF GGI WA+LVAR CQLYPNA PS L+ + F V
Sbjct: 187 NQSTFCETLRAVKLWAKNHGIYSNAIGFFGGIAWAILVARTCQLYPNAAPSKLIQKVFFV 246
Query: 189 YTQWRWPNPVLLCAIEE----GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 244
++ W WP+PV+L +E +L VWDPRRN D+ HLMPIITP++P NS++NVS
Sbjct: 247 FSTWNWPSPVILKHMENRFDMQNLSQLVWDPRRNYADRLHLMPIITPSFPEQNSTHNVSR 306
Query: 245 STLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRN 304
STL+++ +E + +ICE ++K +A W L E FF Y++ + + I+AE + +
Sbjct: 307 STLQVIQNEMKEAFKICEHVQKGKA--TWKDLLEETNFFCKYRHLIAVSINAEKEKEDTD 364
Query: 305 WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGE 364
+ G+ ESR+RQL +ER++ + + F P +F+GL+ Q +
Sbjct: 365 FAGFFESRIRQLVQLLERNSQVQI-AQVNTRKFKAPFSPGKSQWFIGLEFIQA-----AK 418
Query: 365 QFDIRLTVKEFKQAVSMYTLRKPG-MQISVAHVTRRNLPNFVFPGGVRPSR-PSKGTWDS 422
D+ +K FK+ + K G +QI A+V + L ++ ++ + K T
Sbjct: 419 NLDLTEEIKRFKKIIGNQAKEKIGTVQIDAAYVKKSKLITYISAAELKRGKFMKKDTSPE 478
Query: 423 RRALERKVSSHTKPGADDGRKR 444
+ RK + T+ G D + R
Sbjct: 479 KENANRKRPTTTQSGDDVKKPR 500
>gi|324975506|gb|ADY62687.1| PAPa [Candida orthopsilosis]
Length = 552
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 153/339 (45%), Positives = 224/339 (66%), Gaps = 8/339 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+GP +DID L V PRH TRE DFF ++L PE+ E++ V +A VP
Sbjct: 83 IFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTVFEKILRGRPELEEINSVKEAFVP 141
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +F+G+SIDLL+A+L + +P DL + ++L+N DE+ +R+LNG RVTD+ILRLVP
Sbjct: 142 IIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEKDMRALNGTRVTDEILRLVP 201
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K F+ LR ++ WA++R VY+NV GF GG+ WA+LVARICQLYPNAV ++++ +FF++
Sbjct: 202 KPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVARICQLYPNAVSAVILEKFFQI 261
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y+QW WP PVLL IE+G L ++VW+PR D+ H MP+ITPAYP M +++N++ ST +
Sbjct: 262 YSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPAYPSMCATHNITNSTQK 321
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-RIDISAENADDLRNWKG 307
I+M+EF RG EI + + W L E +FF YK YL + + NA++ + G
Sbjct: 322 IIMNEFNRGVEIIGEIFTGQK--VWSHLLERHSFFHQYKFYLCVVAATKSNAEEHLKYSG 379
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 346
VES+LR L K+E+ + HP+ F + YC
Sbjct: 380 MVESKLRLLVQKLEQ-VDGVELAHPYVKSFEN---AYYC 414
>gi|401840600|gb|EJT43353.1| PAP1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 569
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 149/314 (47%), Positives = 212/314 (67%), Gaps = 4/314 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTL V P+H RE DFF +L E E+ E+ PVPDA VP
Sbjct: 84 IFTYGSYRLGVHGPGSDIDTLVVVPKHVIRE-DFFTVFDALLRERKELDEIAPVPDAFVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K KFSG+SIDL+ ARL +P L +S ++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 143 IIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K FR LR ++ WA+RR VY+N+ GF GG+ WA+LVARICQLYPNA +++++RFF +
Sbjct: 203 KPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFII 262
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++W WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP M +++N++ ST +
Sbjct: 263 LSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKK 322
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKG 307
+++ EF+RG +I + N+ W LFE FF YK YL I +D+ W G
Sbjct: 323 VILKEFERGVQITNDIFSNKK--SWANLFEKNDFFFRYKFYLEITAYTRGSDEQHLKWSG 380
Query: 308 WVESRLRQLTLKIE 321
VES++R L +K+E
Sbjct: 381 LVESKVRLLVMKLE 394
>gi|10120664|pdb|1FA0|A Chain A, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|10120665|pdb|1FA0|B Chain B, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|188595983|pdb|3C66|A Chain A, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
gi|188595984|pdb|3C66|B Chain B, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
Length = 537
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 150/314 (47%), Positives = 212/314 (67%), Gaps = 4/314 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTL V P+H TRE DFF +L E E+ E+ PVPDA VP
Sbjct: 84 IFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDSLLRERKELDEIAPVPDAFVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K KFSG+SIDL+ ARL +P L +S ++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 143 IIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K FR LR ++ WA+RR VY+N+ GF GG+ WA+LVARICQLYPNA +++++RFF +
Sbjct: 203 KPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFII 262
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++W WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP M +++N++ ST +
Sbjct: 263 LSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKK 322
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKG 307
+++ EF RG +I + N+ W LFE FF YK YL I +D+ W G
Sbjct: 323 VILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRYKFYLEITAYTRGSDEQHLKWSG 380
Query: 308 WVESRLRQLTLKIE 321
VES++R L +K+E
Sbjct: 381 LVESKVRLLVMKLE 394
>gi|344231415|gb|EGV63297.1| Poly(A) polymerase PAPalpha [Candida tenuis ATCC 10573]
Length = 560
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 151/332 (45%), Positives = 223/332 (67%), Gaps = 5/332 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+GPG+DIDTL V P+H TRE DFF ++ E PE+ E+ VPDA VP
Sbjct: 83 IFTFGSYRLGVYGPGSDIDTLVVVPKHVTRE-DFFSVFESIVRERPELEEITSVPDAFVP 141
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +F G+SIDL+ A L++ +P ++ + ++L+N DE+ +R+LNG RVTD+IL+LVP
Sbjct: 142 IIKIEFDGISIDLICATLNVPQVPLNMTLDDKNLLRNLDERDMRALNGTRVTDEILQLVP 201
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K F+ LRC++ WA+ R VY NV GF GG+ WA++VARICQLYPNAV +++V +FF +
Sbjct: 202 KPTVFKHALRCIKMWAQARAVYGNVFGFPGGVAWAMMVARICQLYPNAVGAVIVDKFFNI 261
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
YT+W WP PVLL IE+G L ++VW+PR D+ H MPIITPAYP M +++N+++ST +
Sbjct: 262 YTKWNWPQPVLLKPIEDGPLQVKVWNPRLYTNDRNHRMPIITPAYPSMCATHNITSSTQK 321
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAE-NADDLRNWKG 307
+++ E +G +I ++ + W LF+ FF YK YL I + + N ++ W G
Sbjct: 322 VILSELVKGVDIVGDIKLGKR--TWSDLFQRHDFFFRYKFYLCIVVGTKANEEEHSKWSG 379
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 339
+VES+LR L K+E T + HP+ DF+D
Sbjct: 380 FVESKLRLLVQKLE-ATSGIEIAHPYVKDFND 410
>gi|126031338|pdb|2O1P|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
gi|126031339|pdb|2O1P|B Chain B, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
Length = 546
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 150/314 (47%), Positives = 212/314 (67%), Gaps = 4/314 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTL V P+H TRE DFF +L E E+ E+ PVPDA VP
Sbjct: 84 IFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDSLLRERKELDEIAPVPDAFVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K KFSG+SIDL+ ARL +P L +S ++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 143 IIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K FR LR ++ WA+RR VY+N+ GF GG+ WA+LVARICQLYPNA +++++RFF +
Sbjct: 203 KPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFII 262
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++W WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP M +++N++ ST +
Sbjct: 263 LSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKK 322
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKG 307
+++ EF RG +I + N+ W LFE FF YK YL I +D+ W G
Sbjct: 323 VILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRYKFYLEITAYTRGSDEQHLKWSG 380
Query: 308 WVESRLRQLTLKIE 321
VES++R L +K+E
Sbjct: 381 LVESKVRLLVMKLE 394
>gi|126030614|pdb|2HHP|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Closed
Conformation
Length = 530
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 150/314 (47%), Positives = 212/314 (67%), Gaps = 4/314 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTL V P+H TRE DFF +L E E+ E+ PVPDA VP
Sbjct: 84 IFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDSLLRERKELDEIAPVPDAFVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K KFSG+SIDL+ ARL +P L +S ++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 143 IIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K FR LR ++ WA+RR VY+N+ GF GG+ WA+LVARICQLYPNA +++++RFF +
Sbjct: 203 KPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFII 262
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++W WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP M +++N++ ST +
Sbjct: 263 LSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKK 322
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKG 307
+++ EF RG +I + N+ W LFE FF YK YL I +D+ W G
Sbjct: 323 VILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRYKFYLEITAYTRGSDEQHLKWSG 380
Query: 308 WVESRLRQLTLKIE 321
VES++R L +K+E
Sbjct: 381 LVESKVRLLVMKLE 394
>gi|119494846|ref|XP_001264225.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
gi|119412387|gb|EAW22328.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
Length = 603
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 172/469 (36%), Positives = 256/469 (54%), Gaps = 71/469 (15%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL VGP+H + DFF + +L +M + ++ PVPDA VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLVVGPKHVLID-DFFSDFPPVLEKMAPPGAIEKMTPVPDAFVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + SG+SIDL++ARL + +P +LD+ + L+ DE+ VRSLNG RVTD+IL LVP+
Sbjct: 149 IKLELSGISIDLIFARLIVSSVPLNLDLKNNDYLRGLDEKEVRSLNGTRVTDEILELVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP+A S++V +FFR+
Sbjct: 209 QKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPHATGSVIVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
+W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++N+S ST +
Sbjct: 269 NKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCATHNISMSTKAV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGW 308
++ E QRG +I + + + + W+ LF +FF + YK YL I S+ + W G
Sbjct: 329 ILRELQRGGDIVDKIFLKQ--LTWNDLFARHSFFTQDYKYYLSITASSRTKEAEAVWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF------------------------------- 337
VES++R L ++R + HP P F
Sbjct: 387 VESKIRHLVGALDRKP-TIAVAHPFPKGFERVHIVSNEEEAEAVKNGSTKYQDKGTKTET 445
Query: 338 --SDKSKPLYCSYFMGLQRKQGVPVGE----------------------------GEQFD 367
K + G++ + PVGE D
Sbjct: 446 TDERKDAAHQAAALSGVENAEVEPVGEKSANGDSHIIYTTTYYIGLELKPLEPGASRSLD 505
Query: 368 IRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-PGGVRPSR 414
I + FK + + +PG+ +S+ HV +LP+ VF PG RP+R
Sbjct: 506 ISTDAQIFKSTCTSWAGYQPGINDLSITHVRNFDLPDDVFQPGETRPTR 554
>gi|67517193|ref|XP_658478.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|40746747|gb|EAA65903.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|259488841|tpe|CBF88615.1| TPA: poly(A) polymerase Pap (AFU_orthologue; AFUA_1G15340)
[Aspergillus nidulans FGSC A4]
Length = 601
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/329 (45%), Positives = 218/329 (66%), Gaps = 8/329 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM-PE--VTELHPVPDAHVPV 69
G + V+GPG+DIDTL +GP+H + DFF E +L M P+ V ++ PVPDA VP+
Sbjct: 92 GSYRLGVYGPGSDIDTLVLGPKHVVID-DFFAEFPPLLESMAPQGAVEKITPVPDAFVPL 150
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + SG+SIDL++ARL + IP +LD+ + L+ DE+ VRSLNG RVTD+IL LVP+
Sbjct: 151 IKLELSGISIDLIFARLIVPSIPLNLDLKNNDYLRGLDEKEVRSLNGTRVTDEILELVPQ 210
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+
Sbjct: 211 QKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIM 270
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
+W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++N+S ST +
Sbjct: 271 NKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNISMSTKAV 330
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGW 308
++ E QRG +I + + +A W+ LF+ +FF YK YL + S+ + W G
Sbjct: 331 ILRELQRGGDIVDKIWAKQA--TWNDLFKKHSFFTNDYKYYLGVTASSRTKEAESVWSGL 388
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES++R L ++R + HP P F
Sbjct: 389 VESKVRHLVGALDRKP-TIAVAHPFPKGF 416
>gi|339236667|ref|XP_003379888.1| poly(A) polymerase gamma [Trichinella spiralis]
gi|316977404|gb|EFV60513.1| poly(A) polymerase gamma [Trichinella spiralis]
Length = 923
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/408 (41%), Positives = 239/408 (58%), Gaps = 30/408 (7%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADIDTLCV PRH RE DFF +L PEV+E P+ +A VP
Sbjct: 286 IFTFGSYRLGVHTRGADIDTLCVAPRHILRE-DFFTSFKDLLKSQPEVSECRPIEEAFVP 344
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K KF G+ +D+++ARL+L +PE+ + D +L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 345 VIKLKFDGIELDMVFARLALKEVPENQKLDDDELLRNLDVKCIRSLNGCRVTDEILNLVP 404
Query: 129 KIQNFRTTLRCMRFWAKR-RGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
+ FR TLR ++FWAKR +GVYSNV GFLGG++WA+LVAR CQLYP A P++LV++
Sbjct: 405 NKETFRLTLRAIKFWAKRKKGVYSNVVGFLGGVSWAMLVARTCQLYPRAAPNVLVNK--- 461
Query: 188 VYTQWRWPNPVLL----CAIEEGSLGLQ--VWDPRRNPKDKYHLMPIITPAYPCMNSSYN 241
WP PVLL + G +G Q +WDPR D+YHLMPIITPA+P NS++N
Sbjct: 462 -----EWPKPVLLKNSITSQNHGYIGFQELIWDPRVKQSDRYHLMPIITPAFPQQNSTFN 516
Query: 242 VSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD 301
VS++T I+ G + + E + W LFEP FF YK+Y+ I A D
Sbjct: 517 VSSTTRSILQKFLHEGFLV--STEVICKGLSWPKLFEPSNFFVKYKHYIVISCFAATRAD 574
Query: 302 LRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS---DKSKPLYCSYFMGLQ-RKQG 357
L W G VES++R L + E H +L H +P FS + + + +GL+ K+G
Sbjct: 575 LITWSGLVESKMRYLIGQFE-HNTGVLLAHVNPEQFSPLEEHGDGVESFWVVGLEMNKEG 633
Query: 358 VPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNL 401
+ + D+ ++ F ++ L + GM++ + RR L
Sbjct: 634 IG---AKNIDLTSDIQSFVDSIMRQALNSDVWRQGMKVEAKYRRRREL 678
>gi|365764657|gb|EHN06179.1| Pap1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 488
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/405 (41%), Positives = 241/405 (59%), Gaps = 16/405 (3%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VHGPG+DIDTL V P+H TRE DFF +L E E+ E+ PVPDA VP++K
Sbjct: 88 GSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDSLLRERKELDEIAPVPDAFVPIIKI 146
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
KFSG+SIDL+ ARL +P L +S ++L+N DE+ +R+LNG RVTD+IL LVPK
Sbjct: 147 KFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPKPNV 206
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
FR LR ++ WA+RR VY+N+ GF GG+ WA+LVARICQLYPNA +++++RFF + ++W
Sbjct: 207 FRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFIILSEW 266
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP M +++N++ T ++++
Sbjct: 267 NWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITECTKKVILQ 326
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKGWVES 311
EF RG +I + N+ W LFE FF YK YL I +D+ W G VES
Sbjct: 327 EFVRGVQITNDIFSNKK--SWANLFEKNDFFFRYKFYLEITAYTRGSDEQHLKWSGLVES 384
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRL 370
++R L +K+E + HP F S P Y M +Q K G E ++L
Sbjct: 385 KVRLLVMKLEVLA-GIKIAHPFTKPFESSYCCPTEDDYEM-IQDKYGSHKTETALNALKL 442
Query: 371 TVKEFKQAVSMYTLRKPGMQISVAHV-------TRRNLPNFVFPG 408
E K+ S+ P +S ++ +R F FP
Sbjct: 443 VTDENKEEESIKD--APKAYLSTMYIGLDFNIENKRKKLTFTFPA 485
>gi|19073993|ref|NP_584599.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|19068635|emb|CAD25103.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|449329262|gb|AGE95535.1| poly (a) polymerase type 1 [Encephalitozoon cuniculi]
Length = 505
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 160/416 (38%), Positives = 251/416 (60%), Gaps = 18/416 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LC+ PRH +R DFF ++ L P + E+ + DA VP
Sbjct: 86 IFTFGSYRLGVHSKGADIDALCIVPRHVSRS-DFFTHFYEELKGDPNIEEVTKIEDAFVP 144
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K KF G+ IDL++ARLS+ V+ + +++ D++L++ DE+ + SLNG RVTD++L LVP
Sbjct: 145 IIKLKFQGIPIDLVFARLSIPVVKDGINLLNDTLLKSMDEKCILSLNGSRVTDEMLNLVP 204
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
++ F + LRC+++WAKRR VY N G+ GG+ ++L VAR+CQLYPNA +V +FF +
Sbjct: 205 SVKTFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLCVARVCQLYPNASSFTIVCKFFEL 264
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++ W+WP PV+L + + + L+VWDP+ P DKYH MP+ITPAYP M +++NVS ST
Sbjct: 265 FSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAYPSMCATHNVSNSTQH 324
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
++ EF R H+I E+N D+ +FE FF Y+ ++ + + +D W+G+
Sbjct: 325 VITMEFTRAHKILSDPERN----DFRRIFELSDFFSRYRLFVEVLAMSSCEEDFPKWEGY 380
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF--SDKSKPLYCSYFMGLQRKQG-------VP 359
+ES++R L K E ++L P P F +++S G+++ +P
Sbjct: 381 LESKIRILASKFE-AVDDVLYAIPFPKAFRVAEESIEKIGPRMEGMKKCTAFFIAIDVIP 439
Query: 360 VGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF--VFPGGVRPS 413
V +G++ + VKEF + V Y R GM+I V + R+++ F VF G PS
Sbjct: 440 V-KGKKVIVEQQVKEFIEFVREYEGRASGMRIEVNSLKRKDVQGFLRVFYGKESPS 494
>gi|70996294|ref|XP_752902.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|66850537|gb|EAL90864.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|159131656|gb|EDP56769.1| poly(A) polymerase Pap [Aspergillus fumigatus A1163]
Length = 580
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 173/449 (38%), Positives = 256/449 (57%), Gaps = 54/449 (12%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL VGP+H + DFF + +L +M + ++ PVPDA VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLVVGPKHVLID-DFFSDFPPVLEKMAPPGAIEKMTPVPDAFVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + SG+SIDL++ARL + +P +LD+ + L+ DE+ VRSLNG RVTD+IL LVP+
Sbjct: 149 IKLELSGISIDLIFARLIVSSVPLNLDLKNNDYLRGLDEKEVRSLNGTRVTDEILELVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP+A S++V +FFR+
Sbjct: 209 QKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPHATGSVIVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
+W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++N+S ST +
Sbjct: 269 NKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNISMSTKAV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGW 308
++ E QRG +I + + + + W+ LF +FF + YK YL I S+ + W G
Sbjct: 329 ILRELQRGGDIVDKIFLKQ--LTWNDLFARHSFFTQDYKYYLSITASSRTKEAEAVWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF------------------------------- 337
VES++R L ++R + HP P F
Sbjct: 387 VESKIRHLVGALDRKP-TIAVAHPFPKGFERVHIVSNEEEAEAVKNGSTKYQDKGTKTET 445
Query: 338 --SDKSKPLYCSYFMGLQRKQGVPVGE----GEQFDIRLTVKEFKQAVSMYTLRKPGMQ- 390
K + G++ + PVGE G+ I T + + + L +PG Q
Sbjct: 446 TDERKDAAHQAAALSGVENAEVEPVGEKSVNGDSHIIYTTT--YYIGLELKPL-EPGYQP 502
Query: 391 ----ISVAHVTRRNLPNFVF-PGGVRPSR 414
+S+ HV +LP+ VF PG RP R
Sbjct: 503 GINDLSITHVRNFDLPDDVFQPGETRPMR 531
>gi|320583027|gb|EFW97243.1| poly(A) polymerase isozyme [Ogataea parapolymorpha DL-1]
Length = 1547
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/331 (44%), Positives = 222/331 (67%), Gaps = 5/331 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+GPG+DIDTL V P+H TR+ DFF ++L + PE+ ++ PVPDA +P
Sbjct: 1045 IFTFGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFTVFEELLRKRPELNKIQPVPDAFMP 1103
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K F GV IDL+ RL + + DL + +++L+N D++ +R+LNG RVTDQIL+LVP
Sbjct: 1104 IIKTVFDGVDIDLICGRLDIPQVSLDLTLEDNNLLRNIDDRDLRALNGTRVTDQILQLVP 1163
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR LR ++ WA+RR +Y+N+ GF GG+ WA+LVARICQLYPNAV +++VS+FF++
Sbjct: 1164 QKMVFRHALRTIKLWAQRRAIYANMFGFPGGVAWAMLVARICQLYPNAVGAVIVSKFFQI 1223
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y QW+WP PVLL IE+G L +++W+P+ +D+ H MP+ITPAYP M +++N++ ST +
Sbjct: 1224 YLQWKWPQPVLLKPIEDGPLPVRIWNPKLYGQDRLHRMPVITPAYPSMCATHNITASTQK 1283
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKG 307
I++ E QRG EI ++ + W LF FF AYK YL + + ++ + W G
Sbjct: 1284 IILKEMQRGLEIMNDIQFGKR--TWKDLFAKHDFFFAYKFYLTVITATRDSYEAHLKWSG 1341
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFS 338
VES+LR L K+E ++ HP+ FS
Sbjct: 1342 MVESKLRLLVQKLEV-VNGIVLAHPYVKPFS 1371
>gi|320586365|gb|EFW99044.1| pap-like poly(A) polymerase [Grosmannia clavigera kw1407]
Length = 596
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 182/520 (35%), Positives = 284/520 (54%), Gaps = 74/520 (14%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREE--DFFGELHQMLTEMPEVTELHPVPDAH 66
+ G + V+ PG+DIDTL V P++ +RE+ ++F E+ Q +T +T+L PV DA
Sbjct: 85 IFTYGSFRLGVYMPGSDIDTLVVAPKYVSREDYFNYFPEMLQAMTPPGSITDLTPVEDAF 144
Query: 67 VPVMKFKFSGVSIDLLYARLSLWVIPED--LDISQDSILQNADEQTVRSLNGCRVTDQIL 124
VP++KF+++G+SIDL+++R+ L +P D + ++L+ DE +RS+NG RVTD+IL
Sbjct: 145 VPIIKFEYNGISIDLIFSRVLLTQLPSDDKWGLKDSNLLRGLDEAELRSVNGTRVTDEIL 204
Query: 125 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSR 184
LVP+ + FR LR ++ WA+RR +Y+N+ GF GG+ WA++VAR+CQLYP A +++VS+
Sbjct: 205 SLVPEQRTFRDALRAIKLWAQRRAIYANIVGFPGGVAWAMMVARVCQLYPKATGAVIVSK 264
Query: 185 FFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 244
FF + +W WPNPVLL IE+G L ++VW+P+ D++H+MPIITPAYP M ++YN+S
Sbjct: 265 FFGIILRWPWPNPVLLKPIEDGPLPVRVWNPKVYRGDQFHIMPIITPAYPSMCATYNISQ 324
Query: 245 STLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLR 303
S+L I+ E +R EI + + W LF TFF + YK Y+ + ISA D +
Sbjct: 325 SSLSIIKRELERASEISQMIISGRQ--QWKDLFVKHTFFTSDYKYYISV-ISASTEKDAQ 381
Query: 304 N-WKGWVESRLRQLTLKIERH-------TYNMLQCHPH---------------------- 333
N W G+VES++R L +ERH +N H
Sbjct: 382 NTWSGFVESKVRVLVQGLERHESIALARAFNKGYERTHMCKNQADIDAVQNGSLDFMVHK 441
Query: 334 -----PGDFSDKSKP------------LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFK 376
GD +D + P ++++G++ +G + D+ V EFK
Sbjct: 442 SDEARTGDGADGAAPKDAANSADAIEVFTLTHYIGIELVEG-----AKSLDLSFQVDEFK 496
Query: 377 QAVSMYTLRKPGMQ----ISVAHVTRRNLPNFVF-PGGVRPSRPSKGTWDSRRALERKVS 431
+ + K + +S+ HV LP+ VF PG V+P RP+KG RR
Sbjct: 497 ELCFGWDKYKGKLSDVATLSIQHVRNVTLPDDVFEPGEVKPVRPTKGLRQGRR------- 549
Query: 432 SHTKPGADDGRKRKQTDDNVDTH--LRNAKCHATMPSSSG 469
+ A+ +KR ++DN + + HAT S+
Sbjct: 550 NPAAVAANGNKKRIASEDNSSNAPPPKRQQPHATQQQSTA 589
>gi|401825414|ref|XP_003886802.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
gi|392997958|gb|AFM97821.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
Length = 506
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 158/414 (38%), Positives = 250/414 (60%), Gaps = 24/414 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHG G DID LC+ PRH TR DFF ++ L E P + + + DA VP
Sbjct: 86 IFTFGSYRLGVHGKGTDIDALCIVPRHVTRS-DFFTYFYEELKEDPNIEGVTKIEDAFVP 144
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++KF+F G+ IDL++ARL++ V+ + +++ D++L++ DE+ + SLNG RVTD++L LVP
Sbjct: 145 IIKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLKSMDEKCILSLNGSRVTDEMLNLVP 204
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
++ F + LRC+++WAKRR VY N G+ GG+ ++L VAR+CQLYPNA +V +FF +
Sbjct: 205 NVKAFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLCVARVCQLYPNASSFTIVCKFFEL 264
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++ W+WP PV+L + + + L+VWDP+ P DKYH MP+ITPAYP M +++NVS ST
Sbjct: 265 FSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAYPSMCATHNVSNSTQH 324
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
++ EF R HEI EKN D+ +FE FF YK ++ + + + + W+G+
Sbjct: 325 VITMEFSRAHEILSNPEKN----DFRRIFELSDFFSRYKLFVEVLAMSTSEEGFAKWEGY 380
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFS-----------DKSKPLYCS-YFMGLQRKQ 356
VES++R L K E ++L P P F S+ C+ +F+ +
Sbjct: 381 VESKIRILASKFE-AVDDILYAIPFPKAFRVGEESIRKIRPGASEVKKCTAFFIAIDI-- 437
Query: 357 GVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF--VFPG 408
+PV +G++ + VKEF + + Y ++ M+I V + ++++ F VF G
Sbjct: 438 -IPV-KGKKVVVEQQVKEFMEFIKEYEGKESSMRIEVNSLKKKDIQGFLRVFYG 489
>gi|156342919|ref|XP_001620975.1| hypothetical protein NEMVEDRAFT_v1g176602 [Nematostella vectensis]
gi|156206500|gb|EDO28875.1| predicted protein [Nematostella vectensis]
Length = 485
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 172/386 (44%), Positives = 236/386 (61%), Gaps = 12/386 (3%)
Query: 19 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 78
VH GAD TL V P H R DFF + +L P+V EL V +A VPV+K F +
Sbjct: 103 VHTKGAD--TLLVAPHHIDRA-DFFSSFYDLLKNHPDVRELRAVENAFVPVIKLIFCDIE 159
Query: 79 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 138
+DLL+ARL+ IP++LD+ +++L+N D + VRSLNGCRVTD+ILR VP I++FR TL
Sbjct: 160 VDLLFARLASPEIPDNLDLLDENLLKNLDPKCVRSLNGCRVTDEILRQVPNIESFRLTLN 219
Query: 139 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 198
++ WAK+ GVYSNV GFLGG++WA+LVAR CQLYPNA S L+ +FF V+++W WPNPV
Sbjct: 220 AVKLWAKKHGVYSNVLGFLGGVSWAMLVARTCQLYPNAAASTLLQKFFLVFSRWEWPNPV 279
Query: 199 LLCAI---EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQ 255
LL I E LG + WDPR NP D+YHLMPIITPAYP NS++NVS ST +IM DEF
Sbjct: 280 LLKNIPTPSENKLGFKNWDPRTNPGDRYHLMPIITPAYPQQNSTFNVSMSTRKIMCDEFF 339
Query: 256 RGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQ 315
G + E + +A +WD LF P FF Y++Y+ + S+ ++ W G VES++R
Sbjct: 340 IGLKNTEDVISGKA--NWDRLFTPPNFFHKYRHYIVLSASSNTEEEHLEWIGLVESKVRL 397
Query: 316 LTLKIERHTYNMLQCHPHP---GDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTV 372
L +E + Y L H +P G + + +F+GL ++ V ++I++
Sbjct: 398 LISYLENNEYIKL-AHVNPKSYGPLDSEGEKHVTRWFIGLMFEKLENVNINLTYEIQMFK 456
Query: 373 KEFKQAVSMYTLRKPGMQISVAHVTR 398
+ + K GM HV R
Sbjct: 457 NKVHAQAVKIMMFKEGMVTEAKHVRR 482
>gi|239835851|gb|ACS29263.1| pap1 [Clavispora lusitaniae]
Length = 547
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 150/333 (45%), Positives = 219/333 (65%), Gaps = 7/333 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+G G+DIDTL V P+H R+ DFF +L + E+ E+ VPDA VP
Sbjct: 83 IFTFGSYRLGVYGQGSDIDTLVVVPKHVNRQ-DFFDVFVDLLKKRSELEEITSVPDAFVP 141
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +F G+SIDL++A+L + +P DL + ++L+N DE+ +RSLNG RVTD+IL LVP
Sbjct: 142 IIKMEFGGISIDLIFAKLDIPRVPRDLTLDNKNLLKNLDEKDLRSLNGTRVTDEILTLVP 201
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K F+ LRC++ WA++R +Y+NV GF GG+ WA+LVARICQLYPN V +++V +FF++
Sbjct: 202 KPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQLYPNTVSAVIVEKFFQI 261
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y+QW WP PVLL IE+G L ++VW+PR P D+ H MP+ITPAYP M +++N++ ST
Sbjct: 262 YSQWNWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITPAYPSMCATHNITKSTKD 321
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAE--NADDLRNWK 306
++M EF RG + + A W LFE FF YK YL I + + +A+ L+ W
Sbjct: 322 VIMSEFNRGVNVMAQIHAGTA--SWGLLFERHRFFFQYKFYLCIVAATKSSSAEHLK-WS 378
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 339
G +ES++R L K+E T + HP+ F +
Sbjct: 379 GMIESKVRLLVQKLEL-TEGITLAHPYVKPFEN 410
>gi|255930343|ref|XP_002556731.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581344|emb|CAP79117.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 590
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 150/329 (45%), Positives = 214/329 (65%), Gaps = 8/329 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE---VTELHPVPDAHVPV 69
G + V+GPG+DIDTL VGP+H + DFF E +L M + ++ PVPDA VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLVVGPKHVLID-DFFAEFPPVLERMASEGAIEKMTPVPDAFVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + G+SIDL++ARL + IP +LD+ + L+ DE+ VRSLNG RVTD+IL LVP+
Sbjct: 149 IKLELCGISIDLIFARLVIPSIPMNLDLKNNDYLRGLDEREVRSLNGTRVTDEILELVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+
Sbjct: 209 QKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
+W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++N+S ST +
Sbjct: 269 NKWNWPQPVLLKQIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCATHNISMSTKAV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGW 308
++ E QRG ++ + + + + W LF TFF YK YL I S++ + W G
Sbjct: 329 ILRELQRGGDMVDKIFMKQ--LSWHDLFARHTFFTHDYKYYLSITASSKTKEAESVWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES+LR L ++R + HP P F
Sbjct: 387 VESKLRHLVGALDRKPI-IAVAHPFPKGF 414
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 335 GDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT-LRKPGMQIS 392
G ++ + +Y + Y++GL+ K P G+ DI + FK + + ++ M+++
Sbjct: 477 GTVDNEGQTVYTTTYYIGLELKPLEP-GQSRSLDISTDSQIFKSTCTSWPGYQEEVMELA 535
Query: 393 VAHVTRRNLPNFVF-PGGVRPSRPSK 417
V HV +LP+ VF PG R SRP K
Sbjct: 536 VTHVRSFDLPDDVFQPGETRASRPKK 561
>gi|158429647|pdb|2Q66|A Chain A, Structure Of Yeast Poly(A) Polymerase With Atp And
Oligo(A)
Length = 525
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 149/314 (47%), Positives = 211/314 (67%), Gaps = 4/314 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTL V P+H TRE DFF +L E E+ E+ PVPDA VP
Sbjct: 80 IFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDSLLRERKELDEIAPVPDAFVP 138
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K KFSG+SI L+ ARL +P L +S ++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 139 IIKIKFSGISIALICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVP 198
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K FR LR ++ WA+RR VY+N+ GF GG+ WA+LVARICQLYPNA +++++RFF +
Sbjct: 199 KPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFII 258
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++W WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP M +++N++ ST +
Sbjct: 259 LSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKK 318
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKG 307
+++ EF RG +I + N+ W LFE FF YK YL I +D+ W G
Sbjct: 319 VILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRYKFYLEITAYTRGSDEQHLKWSG 376
Query: 308 WVESRLRQLTLKIE 321
VES++R L +K+E
Sbjct: 377 LVESKVRLLVMKLE 390
>gi|50292873|ref|XP_448869.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528182|emb|CAG61839.1| unnamed protein product [Candida glabrata]
Length = 569
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/314 (46%), Positives = 210/314 (66%), Gaps = 4/314 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTL V P+H TRE DFF +L E E+ E+ PVPDA VP
Sbjct: 84 IFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDALLREREELDEIAPVPDAFVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K KFSG+SIDL+ A+L + + L + ++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 143 IIKLKFSGISIDLICAKLDIAQVKPSLTLDDKALLRNLDEKDLRALNGTRVTDEILELVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K FR LR ++ WA+RR +Y+NV GF GG+ WA+LVARICQLYPNA +++++RFF++
Sbjct: 203 KPSVFRIALRAIKIWAQRRAIYANVFGFPGGVAWAMLVARICQLYPNACSAVILNRFFKI 262
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++W+WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP M +++N++ ST
Sbjct: 263 LSEWKWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKA 322
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKG 307
+++ E RG ++ + + W LF FF YK YL I + D+ W G
Sbjct: 323 VILKELNRGIQVTNDIFAYKK--TWADLFTKHDFFFQYKYYLTITAATRGDDEEHLKWSG 380
Query: 308 WVESRLRQLTLKIE 321
VES+LR LTLK+E
Sbjct: 381 LVESKLRLLTLKLE 394
>gi|1256822|gb|AAC52586.1| poly(A) polymerase III [Mus musculus]
Length = 375
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 155/279 (55%), Positives = 197/279 (70%), Gaps = 3/279 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRM 335
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 287
+M++EF++G I + + ++A +W LFE FF+ YK
Sbjct: 336 VMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYK 372
>gi|392870480|gb|EAS32287.2| Poly(A) polymerase PAPalpha [Coccidioides immitis RS]
Length = 599
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 150/333 (45%), Positives = 215/333 (64%), Gaps = 8/333 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDA 65
+ G + V+GPG+DIDTL VGP+H E DFF + L M + +L PVPDA
Sbjct: 86 IFAYGSYRLGVYGPGSDIDTLVVGPKHVAIE-DFFLDFPPTLERMAPKDSIEKLTPVPDA 144
Query: 66 HVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILR 125
+VP++K + SG+SIDL++ARL + IP DLD+ +L+ DE+ +R +NG RVTD+IL
Sbjct: 145 YVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNKELLRGLDEREIRCVNGTRVTDEILE 204
Query: 126 LVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRF 185
LVP+ + FR LR ++ WA+ R +YSNV GF GG+ WA+LVAR+CQLYP A S++V +F
Sbjct: 205 LVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGVAWAMLVARVCQLYPQATGSVIVGKF 264
Query: 186 FRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
FR+ W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++NVS S
Sbjct: 265 FRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSLS 324
Query: 246 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRN 304
T +++ E +RG +I E + + + W LF TFF YK YL I S+ + +
Sbjct: 325 TKAVILRELKRGGDIVEKIFLGQ--LRWSDLFAKHTFFSKDYKYYLNITASSTSKEAQSV 382
Query: 305 WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 337
W G VE++LR L + +++ ++ HP P F
Sbjct: 383 WSGLVEAKLRHLVIALDKKA-SIDVAHPFPKGF 414
>gi|63101121|gb|AAY33178.1| PAPa [Candida parapsilosis]
gi|354544642|emb|CCE41367.1| hypothetical protein CPAR2_303560 [Candida parapsilosis]
Length = 552
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 148/332 (44%), Positives = 219/332 (65%), Gaps = 5/332 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G K V+GP +DID L V PRH TR+ DFF ++L E+ E++ V +A VP
Sbjct: 83 IFTFGSYKLGVYGPSSDIDALVVVPRHVTRD-DFFTVFEKILRGRQELEEINCVKEAFVP 141
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +F+G+SIDLL+A+L + +P DL + ++L+N DE+ +R+LNG RVTD+ILRLVP
Sbjct: 142 IIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEKDMRALNGTRVTDEILRLVP 201
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K F+ LR ++ WA++R +Y+NV GF GG+ WA+LVARICQLYPNAV ++++ +FF++
Sbjct: 202 KSTVFKNALRFVKMWAQQRAIYANVYGFPGGVAWAMLVARICQLYPNAVSAVILEKFFQI 261
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y+QW WP PVLL IE+G L ++VW+PR D+ H MP+ITPAYP M +++N+++ST +
Sbjct: 262 YSQWSWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPAYPSMCATHNITSSTQK 321
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-RIDISAENADDLRNWKG 307
I+M EF RG EI + + W L E FF YK YL + + N ++ + G
Sbjct: 322 IIMSEFDRGVEIMNGVVSGQK--SWSDLLERHDFFHKYKFYLCVVAATKSNTEEHSKYSG 379
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 339
VES+LR L K+E+ + HP+ F +
Sbjct: 380 MVESKLRLLVQKLEQ-VEGVELAHPYVKSFEN 410
>gi|396080920|gb|AFN82540.1| poly (A) polymerase type 1 [Encephalitozoon romaleae SJ-2008]
Length = 505
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 160/414 (38%), Positives = 248/414 (59%), Gaps = 24/414 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHG G DID LC+ PRH TR DFF ++ L P + + + DA VP
Sbjct: 86 IFTFGSYRLGVHGKGTDIDALCIVPRHVTRN-DFFTYFYEELKGDPNIKGVTKIEDAFVP 144
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++KF+F G+ IDL++ARL++ V+ + +++ D++L++ DE+ + SLNG RVTD++L LVP
Sbjct: 145 IIKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLKSMDEKCILSLNGSRVTDEMLNLVP 204
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
++ F + LRC+++WAKRR VY N G+ GG+ ++L VAR+CQLYPNA +V +FF +
Sbjct: 205 NVKAFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLCVARVCQLYPNASSFTIVCKFFEL 264
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++ W+WP PV+L + + + L+VWDP+ P DKYH MP+ITPAYP M +++NVS ST
Sbjct: 265 FSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAYPSMCATHNVSNSTQH 324
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
++ EF R HEI +EKN D+ +FE FF YK ++ + + + W+G+
Sbjct: 325 VITMEFSRAHEILSNLEKN----DFRRIFELSDFFGRYKLFVEVLAMSTLEEGFTKWEGY 380
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFS------DKSKP------LYCSYFMGLQRKQ 356
VESR+R L K E ++L P P F K KP ++F+ +
Sbjct: 381 VESRIRILASKFE-AVDDILYAIPFPKAFRVLEESIGKIKPGAEEVKRCTAFFIAIDV-- 437
Query: 357 GVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF--VFPG 408
+PV +G++ + VKEF + V Y ++ M I + + R+++ F VF G
Sbjct: 438 -IPV-KGKKVVVEQQVKEFMEFVKEYEGKESNMWIEINSLKRKDVQGFLRVFYG 489
>gi|429328821|gb|AFZ80581.1| poly A polymerase, putative [Babesia equi]
Length = 523
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 159/410 (38%), Positives = 243/410 (59%), Gaps = 19/410 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L+ G + + P +DID LC+ P+ TRE FF + + LT++ +++L VPDA+ P
Sbjct: 91 LLTFGSYRLGIVAPDSDIDVLCLCPKCVTRES-FFSDFYISLTKVEAISKLQAVPDAYTP 149
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K + +SID+L+A L + ++++ D+IL+N ++ TVRS+NGCRV IL VP
Sbjct: 150 VIKLCYYDISIDILFANLDARTVNPNINVLDDNILRNMNDSTVRSINGCRVASFILDSVP 209
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
NFR TLR ++ WA RR +YS V G+LGG+ WA+L AR+CQLYPN VP+ L+ +FFRV
Sbjct: 210 NKANFRMTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARVCQLYPNYVPNQLIEKFFRV 269
Query: 189 YTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
Y+ W W PV LC I++ G + +VWDP+ NP D+ HLMPIITPA+P MNS++NV+
Sbjct: 270 YSLWNWKIPVTLCKIKQVPNLPGFMSFKVWDPQNNPHDRQHLMPIITPAFPSMNSTHNVT 329
Query: 244 TSTLRIMMDEFQRGHEICEA--MEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD 301
+T R+M DE +R +I ++ KN+ + F +YK++L I++ +
Sbjct: 330 ATTKRVMTDELKRARDILKSPNTPKNQLLELVLEEED---IFSSYKHFLIIEVYGASEHA 386
Query: 302 LRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG--DFSDKSKPLYCSYFMGLQRKQGVP 359
W+GW+ SR+R L K+E Q P PG F D S F L+
Sbjct: 387 HGKWEGWIGSRMRFLIKKLENLPNT--QIRPLPGFFKFEDSEWEYASSAFFALKCLSNDK 444
Query: 360 VGEGEQ-FDIRLTVKEFKQAVSMYTLR---KPGMQISVAHVTRRNLPNFV 405
G+G + DIR +++ FK ++ +T K +++++ HV LP++V
Sbjct: 445 SGQGSKVLDIRSSIQSFKDIINGWTDMENLKDQIKVNIRHVKSSQLPDYV 494
>gi|755872|gb|AAA64708.1| poly(A) polymerase [Xenopus laevis]
Length = 394
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/279 (54%), Positives = 198/279 (70%), Gaps = 3/279 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF ++ L + EV +L V +A VP
Sbjct: 94 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFSSFYEKLKQQEEVKDLRSVEEAFVP 152
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 153 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 212
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I +FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 213 NIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 272
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 273 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRA 332
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 287
+M++EF++G I + + +A +W LF+ FF+ YK
Sbjct: 333 VMVEEFKQGLAITDEILLLKA--EWSKLFDAPNFFQKYK 369
>gi|403337557|gb|EJY68000.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 575
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 164/430 (38%), Positives = 260/430 (60%), Gaps = 28/430 (6%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH P DID LCV PRH R FFGEL +L P V +L V +A+VP
Sbjct: 110 IFTFGSYRLGVHSPDTDIDALCVAPRHIERTRHFFGELSDILKNHPGVQKLTEVQEAYVP 169
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
V+ F GV IDLL+AR+ L + ++L ++ D+IL+N D++++RSLNGCRVTD IL+LV
Sbjct: 170 VINMVFEGVEIDLLFARVELKEVGQELVNLLDDNILRNCDKESIRSLNGCRVTDSILQLV 229
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++FRTTLR ++ WAK RG+YSNV GFLGG+ WA+LVA IC PN P+ L++ FF+
Sbjct: 230 PNQESFRTTLRVIKLWAKVRGIYSNVMGFLGGVAWAILVANICITCPNLEPNKLLNYFFK 289
Query: 188 VYTQWRW--PNPVLLCAI--EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
YTQW W NP+LL I + S+ + + + LMPIITPA+P MN+++NVS
Sbjct: 290 AYTQWEWNYQNPILLTEIKNDRNSVNFTIEADLFYEEKQTDLMPIITPAFPSMNATFNVS 349
Query: 244 TSTLRIMMDEFQRGHEICEA-MEKNE------ADVDWDTLFEPFTFFEAYKNYLRIDISA 296
ST R M+ EF++G +I EA + +NE +++W LF+ F FF++Y ++++I I +
Sbjct: 350 HSTKRAMLIEFEKGLKITEALLARNEDGSKLHQEMNWRRLFKKFNFFKSYVHFIQIQILS 409
Query: 297 ENADDLRNWKGWVESRLRQLTLKIERHTY---NMLQCHPHPGDFSDKSK---PLYCSYFM 350
++A+D + W G++ES++R+L ++E+ ++ P P + ++ P+ +Y+
Sbjct: 410 KSAEDHKKWTGFIESKIRKLLQQLEKLNELKGGCMEFRPWPKSYHLENNLDFPMDDTYYF 469
Query: 351 GLQRKQGVPVGEGEQFDIRLTVKEFKQAVS---------MYTLRKPGMQISVAHVTRRNL 401
G++ K+ + + D+ T+K F + + M + + I + ++ R L
Sbjct: 470 GIRIKKNESDAQM-RIDLTDTIKIFYKKLREWISVDHKLMQMIVDKLVDIKINYIRRETL 528
Query: 402 PNFVFPGGVR 411
P+ + P G +
Sbjct: 529 PDVIRPRGAQ 538
>gi|115397689|ref|XP_001214436.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
gi|114192627|gb|EAU34327.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
Length = 599
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/329 (44%), Positives = 217/329 (65%), Gaps = 8/329 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL VGP+ + DFF + +L M + ++ PVPDA+VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLVVGPKQVLID-DFFSDFPPVLERMAPPGAIEKMTPVPDAYVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + SG+SIDL++ARL + IP +LD+ + L+ DE+ VRSLNG RVTD+IL LVP+
Sbjct: 149 IKLELSGISIDLIFARLIIPSIPINLDLKNNDYLRGLDEREVRSLNGTRVTDEILELVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+
Sbjct: 209 QKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
+W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++NVS ST +
Sbjct: 269 NKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMSTKNV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGW 308
++ E QRG ++ + + + + W+ LF +FF + YK YLRI ++ + W G
Sbjct: 329 ILRELQRGGDMVDKIFMKQ--LTWNDLFARHSFFTKDYKYYLRITAASTTKEADSVWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES++R L ++R + HP P F
Sbjct: 387 VESKIRHLVGALDRKP-TIAVAHPFPKGF 414
>gi|313216525|emb|CBY37820.1| unnamed protein product [Oikopleura dioica]
Length = 643
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/480 (37%), Positives = 259/480 (53%), Gaps = 36/480 (7%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH DIDTLCV P+H TR FF ML + VTE + +A VP
Sbjct: 79 IYTFGSYRLGVHTSDGDIDTLCVVPQHVTRHH-FFTIFLDMLKKTEGVTECRDIREAFVP 137
Query: 69 VMKFKFSGVSIDLLYARLSL-WVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
++K F G+ +D+L+ARL+ +PED D+ IL+N +E+ VRSLNGCRVTD+IL LV
Sbjct: 138 LIKLYFDGIDMDILFARLANNSKVPEDQDLRNIEILRNLEEKCVRSLNGCRVTDEILHLV 197
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC-------------QLYP 174
P I+ FR TLR ++ WA+R+G+Y N GF+GG+ WA+LVAR C QLYP
Sbjct: 198 PNIETFRLTLRAVKLWARRKGIYKNALGFIGGVCWAMLVARTCQVGLSCLEFLAIFQLYP 257
Query: 175 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPIITPA 232
NA PS L+ +FF ++++W WP PV L E+ G VWDPR NP D+ HLMPIITPA
Sbjct: 258 NAAPSTLLEKFFLLFSKWDWPKPVFLKVPEDAPPGFTHPVWDPRFNPLDRSHLMPIITPA 317
Query: 233 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD------WDTLFEPFTFFEAY 286
YP NS++NVS STL +M E + +E + + + + D W LF FF Y
Sbjct: 318 YPHQNSTFNVSRSTLSVMKQEIKDAYETTKQILQKTPNPDEPNTRLWADLFTRTDFFNKY 377
Query: 287 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKS 341
K+++ + +A+ + + W G VES +R+L +ER+ Y +L H + +
Sbjct: 378 KHFIVLSATADQQEQYQKWIGLVESNIRKLVNDLERNEY-ILIAHVNVDSIELDPAEEGQ 436
Query: 342 KPLY-CSYFMGLQ-RKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRR 399
P Y C +F+GL + V DI+ QA + P M++ +V R
Sbjct: 437 SPRYVCRWFLGLSFHRCEVKPNINLTSDIQRFTDLLHQAAISHNNYTPDMRVEARYVKRH 496
Query: 400 NLPNFVFPGGVRPSRPSKGT--WDSRRALERKVSSHTKPGADDGRKRKQTDDN---VDTH 454
NL F+ P R + SK S+ + + + +TK + K Q+ +N ++TH
Sbjct: 497 NLVKFLTPELARTLKLSKSKEGRKSKTNAQNQSNGNTKKAEESESKNSQSKENKEKLETH 556
>gi|303317852|ref|XP_003068928.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108609|gb|EER26783.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 599
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/329 (45%), Positives = 214/329 (65%), Gaps = 8/329 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL VGP+H E DFF + L + + +L PVPDA+VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLVVGPKHVAIE-DFFLDFPPTLERLAPKDSIEKLTPVPDAYVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + SG+SIDL++ARL + IP DLD+ +L+ DE+ +R +NG RVTD+IL LVP+
Sbjct: 149 IKLELSGISIDLIFARLIVHSIPPDLDLRNKELLRGLDEREIRCVNGTRVTDEILELVPE 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+ R +YSNV GF GG+ WA+LVAR+CQLYP A S++V +FFR+
Sbjct: 209 KKTFRLALRAIKLWAQSRAIYSNVVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++NVS ST +
Sbjct: 269 NYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSLSTKAV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRNWKGW 308
++ E +RG +I E + + + W LF TFF YK YL I S+ + + W G
Sbjct: 329 ILRELKRGGDIVEKIFLGQ--LRWSDLFAKHTFFSKDYKYYLNITASSTSKEAQSVWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VE++LR L + +++ ++ HP P F
Sbjct: 387 VEAKLRHLVIALDKKA-SIEVAHPFPKGF 414
>gi|294939386|ref|XP_002782444.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239894050|gb|EER14239.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 553
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/428 (39%), Positives = 248/428 (57%), Gaps = 30/428 (7%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + + P +DID LCV PRH TRE FFG L L +M EV + PVPDA+ P
Sbjct: 95 LFTFGSHRLGLISPSSDIDCLCVAPRHVTREA-FFGSLVGKLQQMDEVETVTPVPDAYAP 153
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K V IDLL+ARL+L D+ D +L+N D+++VR +NG RV D IL+LVP
Sbjct: 154 IIKLICCEVDIDLLFARLNLTSTSGLKDLQSDELLKNLDDRSVRCVNGTRVADLILKLVP 213
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
FR LR ++ WAKRRG+Y+N+ GF GGI WA+LVAR+CQ++PN LV RFF +
Sbjct: 214 TPNTFRGCLRLIKLWAKRRGLYANIIGFFGGITWAILVARVCQMFPNMQSVQLVRRFFLI 273
Query: 189 YTQWRWPNPVLLCAI----EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 244
++W W NPV LC I E G + +VW+P++ D+ HLMP+ITPA+P MNS+YNV+
Sbjct: 274 LSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPKQYASDRSHLMPVITPAFPSMNSTYNVTE 333
Query: 245 STLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRN 304
+T RI+M E +R H++ + K E VDW+ L F FF Y Y++I +SA ++ R
Sbjct: 334 TTKRIIMGEIERAHKL--TLPKKE-QVDWELLCHKFPFFCNYLYYVQIRVSALSSTAYRK 390
Query: 305 WKGWVESRLRQLTLKIERHTYNMLQCHPHP--------GDFSDKSKPLYCSYFMGLQ--R 354
+KG+VESRLR L +E +T + P P G+ + S C +++GL +
Sbjct: 391 YKGFVESRLRLLVRMLE-NTPGIKSVRPWPEEMPYVVDGEVRENS----CCWYIGLDFPK 445
Query: 355 KQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP---GMQISVAHVTRRNLPNFVFPGGVR 411
+ G+ D+R F ++ ++ + ++ +A+++R LP + V+
Sbjct: 446 LSSMAAGQTVTCDLRNCTSGFFDRINEWSEKDTYHGQFEMDIAYISRPKLPEHL----VK 501
Query: 412 PSRPSKGT 419
PS T
Sbjct: 502 DQSPSTDT 509
>gi|296415646|ref|XP_002837497.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633369|emb|CAZ81688.1| unnamed protein product [Tuber melanosporum]
Length = 587
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/312 (47%), Positives = 210/312 (67%), Gaps = 6/312 (1%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM-PEVTELHPVPDAHVPVMK 71
G + V+ PG+DIDTL V P H TR DFF L ML E+ P +L VPDA VP++K
Sbjct: 90 GSYRLGVYAPGSDIDTLLVTPAHITRH-DFFATLPAMLQELVPPPEDLSMVPDAFVPIIK 148
Query: 72 FKFSGVSIDLLYARLS-LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKI 130
FK +SIDL++ARL+ + +P+D+ +S +L+ DE +R LNG RVTD+IL LVPK
Sbjct: 149 FKLQSISIDLIFARLANVNSVPKDMALSDKELLRGCDEVNLRCLNGTRVTDEILTLVPKP 208
Query: 131 QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYT 190
FR LR ++ WA+RR +Y+NV GF GG+ WA+LVARICQLYP AV ++++S+FF++
Sbjct: 209 GVFRMALRGIKLWAQRRAIYANVMGFPGGVAWAMLVARICQLYPMAVSAVVISKFFKILA 268
Query: 191 QWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIM 250
W WP PVLL IE+G L ++VW+P+ P D+ HLMPIITPAYP M +++N++ ST I+
Sbjct: 269 HWTWPQPVLLKGIEDGPLSVRVWNPKIYPSDRGHLMPIITPAYPSMCATHNITKSTKSII 328
Query: 251 MDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGWV 309
+ E + EI + + ++ WD LFE +FF Y+ YL + +A++ D L W G V
Sbjct: 329 IREMKHAAEIMDGIMV--GNLSWDKLFERHSFFTNGYRYYLSVVAAAKDKDTLLGWSGLV 386
Query: 310 ESRLRQLTLKIE 321
ES+LR L +K+E
Sbjct: 387 ESKLRHLVMKLE 398
>gi|1709575|sp|P51006.1|PAPO3_XENLA RecName: Full=Poly(A) polymerase type 3; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|643648|gb|AAC59747.1| poly(A) polymerase type 3, partial [Xenopus laevis]
Length = 400
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 197/279 (70%), Gaps = 3/279 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R D F ++ L + EV +L V +A VP
Sbjct: 94 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DLFSSFYEKLKQQEEVKDLRSVEEAFVP 152
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 153 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 212
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I +FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 213 NIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 272
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS ST
Sbjct: 273 FSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRA 332
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 287
+M++EF++G I + + +A +W LF+ FF+ YK
Sbjct: 333 VMVEEFKQGLAITDEILLLKA--EWSKLFDAPNFFQKYK 369
>gi|303388385|ref|XP_003072427.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
gi|303301567|gb|ADM11067.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
Length = 505
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 158/414 (38%), Positives = 249/414 (60%), Gaps = 24/414 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHG G DID LC+ PRH TR DFF ++ L P + E+ + DA VP
Sbjct: 86 IFTFGSYRLGVHGKGTDIDALCIVPRHVTRN-DFFTHFYEELKGDPNIKEVTKIEDAFVP 144
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++KF+F G+ IDL++ARL++ V+ + +++ D++L++ DE+ + SLNG RVTD++L LVP
Sbjct: 145 IIKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLKSMDEKCILSLNGSRVTDEMLNLVP 204
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ F + LRC+++WAKRR VY N G+ GG+ ++L VAR+CQLYPNA +V +FF +
Sbjct: 205 NVNTFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLCVARVCQLYPNASSFSIVCKFFEL 264
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++ W+WP PV+L + + + L+VWDP+ P DKYH MP+ITPAYP M +++NVS ST
Sbjct: 265 FSSWKWPTPVVLRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAYPSMCATHNVSNSTQH 324
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
++ EF R HEI + EKN D+ +F+ FF YK + I + + W+G+
Sbjct: 325 VISMEFARAHEILSSPEKN----DFRKIFDLSDFFSRYKLFAEILAMSTEEEGFPKWEGY 380
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF----SDKSKPLY--------CSYFMGLQRKQ 356
VES++R L K E ++L P P F + K Y ++F+ +
Sbjct: 381 VESKVRILASKFE-AVDDILYAIPFPKAFRVAEENIGKIKYGMQDLKKCTAFFIAIDV-- 437
Query: 357 GVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF--VFPG 408
+PV +G++ + VKEF ++ Y ++ M+I + + ++++ NF VF G
Sbjct: 438 -IPV-KGKKVVVEQQVKEFVDFMNEYEGKERSMRIEINSLKKKDVQNFLRVFYG 489
>gi|348506632|ref|XP_003440862.1| PREDICTED: poly(A) polymerase alpha-like [Oreochromis niloticus]
Length = 601
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 174/463 (37%), Positives = 261/463 (56%), Gaps = 35/463 (7%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G VH GADID LCVGP R+ FF L EV ++ + +A+VP
Sbjct: 82 IFPFGSYHLGVHSKGADIDALCVGPGFLERKA-FFTSFFAKLKAQKEVKDIQAIEEAYVP 140
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+ + G+ IDL++A LS +P++LD+ +SI+++ D + VRS NG RVT+QILRLVP
Sbjct: 141 VITLSWEGIQIDLVFALLSRRSVPDNLDLLNNSIVKDIDIRCVRSFNGYRVTEQILRLVP 200
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ NFR LR ++ WAK+R +YSN GFLGG++WA++VARICQ+YPNA S LV +FF++
Sbjct: 201 NVLNFRVALRAIKLWAKQRNIYSNKLGFLGGVSWAIMVARICQVYPNATTSTLVIKFFKI 260
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++ W WP P+ L +E+ + L WDP+ N D+ HLMPIITPAYP N+S NVS STL
Sbjct: 261 FSMWVWPIPIRLIEVEKCNYNLPFWDPKVNQSDRCHLMPIITPAYPQQNTSVNVSRSTLA 320
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
I+ +E RGH IC+ +E+ +A W LFE FF+ Y++Y ++ S + W G
Sbjct: 321 ILNEEIHRGHAICQEIEQKKA--KWSELFEQTDFFQKYQHYAVLEASYTTEEKCLEWVGL 378
Query: 309 VESRLRQLTLKIERHTY-NMLQCHPH--PGDF-SDKSKPLYCSYFMGLQRKQGVPVGEGE 364
VES++R L +ER+ ++ HPH PG ++K + +GL + V + E
Sbjct: 379 VESKIRLLVSTLERNELVSLAHVHPHAFPGHRKANKKDGQSTMWLIGLV----LNVKDSE 434
Query: 365 QFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRR 424
+F+ ++ +Y GM +SVA + R +L ++ R +PS
Sbjct: 435 RFN------SLARSSDIY---DEGMSLSVACLRREDL---IYEPQQRAPQPS-------- 474
Query: 425 ALERKVSSHTKPGADD--GRKRKQTDDNVDTHLRNAKCHATMP 465
E H P + D G K+++ +T + K ++P
Sbjct: 475 --ETLPPCHVSPVSADKQGTKKRELLHRSETPSKKIKDDKSLP 515
>gi|400594797|gb|EJP62626.1| Poly(A) polymerase pla1 [Beauveria bassiana ARSEF 2860]
Length = 593
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 172/465 (36%), Positives = 255/465 (54%), Gaps = 71/465 (15%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V GPG+DIDTL V P++ TRE D+F ++L EM +T+L V DA VP+
Sbjct: 93 GSFRLGVFGPGSDIDTLIVAPKYVTRE-DYFKYFPELLAEMAPKDSITDLAAVTDAFVPI 151
Query: 70 MKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+KF++SG+SIDL+++R+ + P+ D+ +L+ DE +RSLNG RVTD+IL LVP
Sbjct: 152 IKFEYSGISIDLIFSRIIQKQLAPDFQDLKDSGLLRGLDEAELRSLNGTRVTDEILALVP 211
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR LR ++ WA+RR VY N+ GF GG+ WA+LVAR+CQLYP A S++V++FF V
Sbjct: 212 EQSTFRLALRAIKLWAQRRAVYGNIMGFPGGVAWAMLVARVCQLYPKAATSVIVNKFFLV 271
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+QWRWP PVLL IE G L ++VW+P+ D +HLMPIITPAYP M +++N++ S++
Sbjct: 272 MSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGDSFHLMPIITPAYPSMCATFNITRSSMT 331
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKG 307
I+ E QRG EI E + + W+ LF TFF YK Y+ + +++ D + W G
Sbjct: 332 IIKRELQRGLEITEQVMVGKQ--SWNDLFVKHTFFTTGYKYYISVVSASKARDAHKLWSG 389
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK--------------------------- 340
++ES++R L K+E H + L HP +S +
Sbjct: 390 YIESKVRMLVQKLEHHPHIAL-AHPFVKGYSRRHLCKDETQIEQVQEGSLDFVVSDDVQL 448
Query: 341 ------------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFK 376
S+ ++++GL+ ++G + D+ V EFK
Sbjct: 449 DGESNEQNGEQKEAAEGEAEKQTSSEVFTTTHYIGLELEEG-----AKSLDLSYQVDEFK 503
Query: 377 QAVSMYTLR----KPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 417
+ + KP + I V HV NLP+ VF G +P K
Sbjct: 504 VLCTAWQKYQDELKPLVSIGVQHVRNFNLPDDVF--GADEKKPQK 546
>gi|170051830|ref|XP_001861944.1| poly a polymerase [Culex quinquefasciatus]
gi|167872900|gb|EDS36283.1| poly a polymerase [Culex quinquefasciatus]
Length = 631
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 152/329 (46%), Positives = 214/329 (65%), Gaps = 5/329 (1%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + V+ GA+ID LCV PR+ R D+FG ++L + PEVTE V +A VPV+K
Sbjct: 307 FGSYRLGVNHKGANIDALCVAPRNIERL-DYFGSFFELLKKQPEVTECRAVEEALVPVVK 365
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ IDLL+ARL+L IP + D+ D +L+N D + VRSLNGCR TD+ILRLVP I
Sbjct: 366 MNFDGIKIDLLFARLALKEIPNNFDLGDDMLLKNLDPKLVRSLNGCRATDEILRLVPNID 425
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAK+ G+YSN G+ GG++W +LVAR CQL PN V + V +FF V+ +
Sbjct: 426 NFRLALRSIKLWAKKHGIYSNSLGYFGGVSWGMLVARTCQL-PNVVAATQVHKFFLVFLR 484
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WP PV L + +LG QVWD R N +D++HLMPIITPAYP NS+++VS+ST ++M+
Sbjct: 485 WKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMPIITPAYPQPNSTFHVSSSTRKVML 544
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
+EF G +I + + +A WD LFE +FF Y+ + + +++ N DD W VES
Sbjct: 545 NEFNSGMQITDEIMLGKA--GWDKLFEAPSFFFKYRYVIVLLVTSNNTDDHLEWCEMVES 602
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSDK 340
++R L +ER + L H +P F +
Sbjct: 603 KIRYLIQNLERILHINL-AHVNPKCFEQQ 630
>gi|327293141|ref|XP_003231267.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
gi|326466383|gb|EGD91836.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
Length = 601
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 146/329 (44%), Positives = 216/329 (65%), Gaps = 8/329 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL V P+H RE DFF +L + + ++ PVPDA VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLVVAPKHVMRE-DFFAHFPAVLEKHAPKDAIEKMTPVPDAFVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + SG+SIDL++ARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL LVP+
Sbjct: 149 IKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+
Sbjct: 209 QKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
QW WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++NVS ST +
Sbjct: 269 NQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRNWKGW 308
++ E +RG ++ + + + W LF +FF A YK YL I+ ++ + + W G
Sbjct: 329 ILRELRRGGDMVDKIFVGQR--RWSDLFARHSFFSADYKYYLSINSTSTSKEAQAIWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES+LR L ++R + ++ HP P F
Sbjct: 387 VESKLRHLVGALDRKS-SIEIAHPFPKGF 414
>gi|326471772|gb|EGD95781.1| Poly(A) polymerase PAPalpha [Trichophyton tonsurans CBS 112818]
Length = 601
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 146/329 (44%), Positives = 216/329 (65%), Gaps = 8/329 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL V P+H RE DFF +L + + ++ PVPDA VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLVVAPKHVMRE-DFFAHFPTVLEKHAPKDAIEKMTPVPDAFVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + SG+SIDL++ARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL LVP+
Sbjct: 149 IKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+
Sbjct: 209 QKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
QW WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++NVS ST +
Sbjct: 269 NQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRNWKGW 308
++ E +RG ++ + + + W LF +FF A YK YL I+ ++ + + W G
Sbjct: 329 ILRELRRGGDMVDKIFVGQR--RWSDLFARHSFFSADYKYYLSINSTSTSKEAQAIWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES+LR L ++R + ++ HP P F
Sbjct: 387 VESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 350 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-P 407
+GL+ K P G DI FK + + +PG+ ++++HV +LP+ VF P
Sbjct: 488 IGLELKPLAP-GASRSLDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYDLPDDVFQP 546
Query: 408 GGVRPSRP 415
G VRP+RP
Sbjct: 547 GEVRPTRP 554
>gi|326484929|gb|EGE08939.1| Poly(A) polymerase PAPalpha [Trichophyton equinum CBS 127.97]
Length = 601
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 146/329 (44%), Positives = 216/329 (65%), Gaps = 8/329 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL V P+H RE DFF +L + + ++ PVPDA VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLVVAPKHVMRE-DFFAHFPTVLEKHAPKDAIEKMTPVPDAFVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + SG+SIDL++ARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL LVP+
Sbjct: 149 IKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+
Sbjct: 209 QKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIM 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
QW WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++NVS ST +
Sbjct: 269 NQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRNWKGW 308
++ E +RG ++ + + + W LF +FF A YK YL I+ ++ + + W G
Sbjct: 329 ILRELRRGGDMVDKIFVGQR--RWSDLFARHSFFSADYKYYLSINSTSTSKEAQAIWSGL 386
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES+LR L ++R + ++ HP P F
Sbjct: 387 VESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 350 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-P 407
+GL+ K P G DI FK + + +PG+ ++++HV +LP+ VF P
Sbjct: 488 IGLELKPLAP-GASRSLDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYDLPDDVFQP 546
Query: 408 GGVRPSRP 415
G VRP+RP
Sbjct: 547 GEVRPTRP 554
>gi|149237693|ref|XP_001524723.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
gi|146451320|gb|EDK45576.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
Length = 587
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 150/339 (44%), Positives = 223/339 (65%), Gaps = 8/339 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + V+GP +DID L V PR+ TRE DFF E ++L E PE+ E++ V +A VP
Sbjct: 85 LFTFGSYRLGVYGPSSDIDALVVFPRYITRE-DFFTEFEKLLRERPELEEINSVREAFVP 143
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +F G+SIDL++A+L + IP+DL ++ ++L+N DE+ +R+LNG RVTD+IL LVP
Sbjct: 144 IIKLEFDGISIDLIFAKLDIPRIPKDLTLTDKNLLKNIDEKDLRALNGTRVTDEILNLVP 203
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K F+ LR ++ WA++R +Y+NV GF GG+ WA+LVARICQLYPNAV S +V +FF++
Sbjct: 204 KPTVFKHALRFIKMWAQQRAIYANVYGFPGGVAWAMLVARICQLYPNAVSSYIVEKFFQI 263
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y+QW WP PVLL IE+G L ++VW+P+ D+ H MP+ITPAYP M +++N++ ST +
Sbjct: 264 YSQWSWPQPVLLKQIEDGPLQVRVWNPKLYSLDRQHRMPVITPAYPSMCATHNITASTQK 323
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA-DDLRNWKG 307
I++DEFQRG I + + +W L + FF YK YL + + ++ ++ + G
Sbjct: 324 IILDEFQRGTTIMHGIL--DGTKNWLDLLQRHDFFHRYKFYLCVVAATKSTYEEHLKYSG 381
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 346
ES+LR L K+E + HP+ F + YC
Sbjct: 382 MFESKLRLLVQKLE-MVPGVELAHPYVKSFENG---YYC 416
>gi|402890991|ref|XP_003908748.1| PREDICTED: poly(A) polymerase gamma [Papio anubis]
Length = 700
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/406 (39%), Positives = 226/406 (55%), Gaps = 50/406 (12%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KF+F G+ + CRVTD+IL LVP
Sbjct: 155 VIKFEFDGIEVR------------------------------------CRVTDEILHLVP 178
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V
Sbjct: 179 NKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLV 238
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST
Sbjct: 239 FSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRT 298
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 299 VMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 356
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++R L +ER+ + L H +P F K +F+G+ ++ V E
Sbjct: 357 VESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAES 414
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 415 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 460
>gi|328772740|gb|EGF82778.1| hypothetical protein BATDEDRAFT_9489 [Batrachochytrium
dendrobatidis JAM81]
Length = 556
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 157/333 (47%), Positives = 221/333 (66%), Gaps = 4/333 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHG +DIDTLCV P+H RE DF ++++L EV+E+ V DA+VP
Sbjct: 102 IFTFGSYRLGVHGKKSDIDTLCVAPKHVKRE-DFLEYMYELLKARQEVSEITAVADAYVP 160
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +FS +SIDL++ARL+L + EDLD+S DS+L+N D++ +RSLNG RVTD ILRLVP
Sbjct: 161 IIKLEFSDISIDLVFARLALPTVSEDLDLSDDSLLKNLDDRCIRSLNGSRVTDDILRLVP 220
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
++ FR LRC++ WA +R +YSNV GF GG+ WA+L+AR+CQLYP A +VS+FF++
Sbjct: 221 NVETFRIALRCIKLWALQRAIYSNVMGFFGGVAWAILIARVCQLYPCAAAGEVVSKFFQI 280
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+W WP PVLL IEEG L ++VW+P+ P+DK H MPIITPAYP M S++NV+ ST
Sbjct: 281 MYRWEWPLPVLLKPIEEGPLAVRVWNPKIYPQDKAHRMPIITPAYPSMCSTHNVTVSTQT 340
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+ EF+R + + W LF+ FF YK YL++ S+ + + W G+
Sbjct: 341 VTTQEFERAAVTTDKIMLGRE--KWTVLFQKNDFFHRYKYYLQVIASSNDDEKQLMWAGF 398
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 341
VESRLRQL +K+E N+ HP+ F K+
Sbjct: 399 VESRLRQLVMKLEL-AENLDIAHPYIKGFDKKT 430
>gi|384494476|gb|EIE84967.1| hypothetical protein RO3G_09677 [Rhizopus delemar RA 99-880]
Length = 408
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 208/312 (66%), Gaps = 7/312 (2%)
Query: 12 LGYDKYSV--HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 69
L Y Y + + ADIDTLCV P++ +R+ DFF + +L ++ ++ PV D++VPV
Sbjct: 89 LTYGSYRLGANAADADIDTLCVFPKYVSRK-DFFTIMLSLLRSNEQIKDITPVTDSYVPV 147
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+KFK++ + ID + ARL++ +PED+D+S IL DE ++RSLNG RV D ILRLVP
Sbjct: 148 IKFKYNDIPIDFVCARLTVDQVPEDIDLSDPKILWGLDEYSIRSLNGARVADDILRLVPN 207
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
I+ FRT LRC++ WA R+ +YSN+ GFLGG+ WA+LVAR+CQLYP+A S +V FF++
Sbjct: 208 IETFRTALRCIKLWATRKAIYSNILGFLGGVAWAILVARVCQLYPHASASTVVYHFFQIL 267
Query: 190 TQWRWPNPVLLCAIEEGS--LGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
W WP+PV+L A+E+G + W+P+ NP D+ H MPIITP+YP M S++NV ST
Sbjct: 268 VHWSWPSPVMLKAVEDGPPLAATRPWNPKLNPTDRSHRMPIITPSYPSMCSTHNVIPSTQ 327
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
RI+M E ++ EI + + A W LF+ FFE Y YL+I + A+N + W G
Sbjct: 328 RIIMGEIKQAAEIVQKIRTGSA--TWARLFQSHNFFEIYMQYLQITVVADNYNLQLKWAG 385
Query: 308 WVESRLRQLTLK 319
VE+RLRQL L+
Sbjct: 386 LVEARLRQLLLE 397
>gi|403220429|dbj|BAM38562.1| polyadenylate polymerase [Theileria orientalis strain Shintoku]
Length = 511
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/408 (37%), Positives = 239/408 (58%), Gaps = 17/408 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L+ G + + P +DID C+ PR TRE FF + + LT++ +T+L VPDA+ P
Sbjct: 91 LLTFGSYRLGIVAPDSDIDVACLCPRGITREA-FFSDFYNTLTKVEGITKLQSVPDAYTP 149
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K + +SID+L++ L + ++++ + IL+N + VRS+NGCRV IL VP
Sbjct: 150 VIKLYYHDISIDILFSNLDEPTVDPNINLLDNKILRNMSDSNVRSINGCRVASFILDSVP 209
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K NFRTTLR ++ WA RR +YS V G+LGG+ WA+L AR+CQ+YPN P+ L+ +FF+V
Sbjct: 210 KKGNFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARVCQMYPNFAPNRLIEKFFKV 269
Query: 189 YTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
++ W W PV LC I+ G + +VWDP + +D+ HLMPIITPA+P MNS++NV+
Sbjct: 270 FSMWNWIYPVTLCKIKRESGVPGLMSFKVWDPTNSLQDRQHLMPIITPAFPSMNSTHNVT 329
Query: 244 TSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR 303
+T R++ +E R ++ + + W+ + E F YK++L I++ +
Sbjct: 330 ATTKRVVTEELSRAAQLLKTPNLTNTQL-WEMVLEEEDVFSKYKHFLVIEVYGSSEHAHN 388
Query: 304 NWKGWVESRLRQLTLKIERHTYNMLQCHPHPG--DFSDKSKPLYCSYFMGLQRKQGVPVG 361
W+GW+ SR+R L K+E Y Q P PG F D+ S F K PV
Sbjct: 389 KWEGWIGSRMRFLIKKLETLEYT--QIRPLPGFFKFEDRDWEYASSAFFAF--KHTAPVV 444
Query: 362 EGEQ-FDIRLTVKEFKQAVSMYT---LRKPGMQISVAHVTRRNLPNFV 405
EG Q FDIR+ ++ FK+ ++ + K + +++ ++ + LP+++
Sbjct: 445 EGYQSFDIRMPIQSFKEIINTWCDMETFKDQIDVNIRYLKSKQLPDYI 492
>gi|406868090|gb|EKD21127.1| Poly(A) polymerase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 579
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 149/317 (47%), Positives = 211/317 (66%), Gaps = 6/317 (1%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREE--DFFGELHQMLTEMPEVTELHPVPDAHVPV 69
G K V GPG+DIDTL V P++ T+ E FF E+ + T +TEL PDA+VP+
Sbjct: 89 FGSFKLGVIGPGSDIDTLVVVPKNITKAEFFQFFPEIMEKSTPPGTITELMSKPDAYVPI 148
Query: 70 MKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+ FKFSGV IDLL+ R+ SL IP+DL ++ +L+ +EQ RSLNG RV D++L LVP
Sbjct: 149 LTFKFSGVDIDLLFGRIASLNQIPKDLKMTDHDLLRGLEEQEARSLNGVRVADEMLTLVP 208
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ + FRT LR ++ W+ RRG+ N+ GF GG+ WA+LVAR+CQLYP A S +V +FF++
Sbjct: 209 QTKVFRTALRTIKLWSARRGIVGNIYGFPGGVAWAILVARVCQLYPKATGSTIVMKFFKI 268
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+W+WP PVLL IE G+L LQVW+P+ N D+ H+MPIITPAYP M +++NV+ ST+
Sbjct: 269 IDKWQWPQPVLLKNIETGTLNLQVWNPQINHTDRRHIMPIITPAYPSMCTTHNVTRSTMA 328
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKG 307
++ E +RG EI + + +A W LFE TFF +YK YL I ++ +++ W G
Sbjct: 329 VIHKELKRGGEIADRVMMGKA--KWKDLFEKHTFFTSSYKYYLCIITASTSSEAQTKWAG 386
Query: 308 WVESRLRQLTLKIERHT 324
+VES++R L K+ T
Sbjct: 387 FVESKVRLLVGKLTEQT 403
>gi|298708409|emb|CBJ48472.1| conserved unknown protein (Partial) [Ectocarpus siliculosus]
Length = 496
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 173/416 (41%), Positives = 243/416 (58%), Gaps = 34/416 (8%)
Query: 6 PLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDA 65
P L G VH P ADID LC+ PRH +RE FF Q+L E+ EL PVP+A
Sbjct: 81 PATLKTFGSYHLGVHTPDADIDVLCLAPRHCSRE-SFFTSFCQILRNHTEIDELFPVPEA 139
Query: 66 HVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILR 125
+ PV+KFK GVSID+L+ L +P ++ L++ D+ VRSLNG RV + IL
Sbjct: 140 YTPVIKFKAQGVSIDMLFCSLHYPKLPRLCNVHVQEHLRHLDDAGVRSLNGVRVAELILS 199
Query: 126 LVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRF 185
LVP Q FRTTLR ++ WA+RRG+YSNV G LGG+NWA+LVA + Q YPNA PS+L+++F
Sbjct: 200 LVPNHQAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLLTKF 259
Query: 186 FRVYTQWRWPNPVLLCAIE--------EGS-LGLQ-VWDPRRNPKDKYHLMPIITPAYPC 235
F +Y +W+WPN V L ++ EG L VW+P NP+DK HLMPIITPAYP
Sbjct: 260 FLMYHRWKWPNHVSLNELQSLQETNVTEGHPFPLHAVWNPVANPRDKAHLMPIITPAYPA 319
Query: 236 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 295
MNSSYNV +R++ +E RG I + + A +W LFE FF ++ Y+++DIS
Sbjct: 320 MNSSYNVGEPQMRLIREEIARGWRITKGISLGIA--NWANLFERSDFFWRFELYVQVDIS 377
Query: 296 AENADDLRNWKGWVESRLRQLTLKIER----HTYNMLQCHPHPGDFSDKSKPLYCSYFMG 351
A +A D R W GW+ESR+R + +++ Y + P+P + ++ + S+F+G
Sbjct: 378 ARSAADHRLWFGWIESRMRSFLVCLDQIDMVEAYPFVNPLPNPYLTNAETGAVGNSFFIG 437
Query: 352 L--------QRKQGVPVGEGEQFDIRLTVKEFKQAVSMY---TLRKPGMQISVAHV 396
L + GVPV D+ ++F V ++ R+ GM++ V V
Sbjct: 438 LGFPEVANGRSPSGVPV------DLTPAWRDFMMRVELWGDRRRRREGMEVDVKAV 487
>gi|302904195|ref|XP_003049022.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729956|gb|EEU43309.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 612
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 156/380 (41%), Positives = 233/380 (61%), Gaps = 27/380 (7%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL + P++ TR+ D+F +L M +T L V DA VP+
Sbjct: 89 GSYRLGVYGPGSDIDTLIIAPKYVTRD-DYFKYFPDLLVSMAPKDAITGLAVVTDAFVPI 147
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDS-ILQNADEQTVRSLNGCRVTDQILRLVP 128
+KF++SG+SIDL+++R+ +P D +DS +L+ DE +RSLNG RVTD+IL LVP
Sbjct: 148 IKFEYSGISIDLIFSRIIQKQLPPDFTNLKDSGLLRGLDEAELRSLNGTRVTDEILTLVP 207
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ F+ LR ++ WA+RR VY+N+ GF GG+ WA+LVAR+CQLYP A PS++V++FF V
Sbjct: 208 EQSTFKLALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVCQLYPKATPSVIVNKFFLV 267
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+QWRWP PVLL IE G L ++VW+PR D +HLMP+ITPAYP M +++N++ S+++
Sbjct: 268 ISQWRWPQPVLLKPIESGPLPVRVWNPRVYKGDSFHLMPVITPAYPSMCATFNITRSSMK 327
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKG 307
++ E R +I E++ + W LF TFF + YK Y+ + SA++ +D + W G
Sbjct: 328 VINRELSRALQISESIMVGKR--PWSDLFVKHTFFTQGYKYYISVISSAKSKEDHKIWSG 385
Query: 308 WVESRLRQLTLKIERHTYNML------------QCHP--HPGDFSDKSKPLYCSYFMGLQ 353
+VES++R L K+E+H L +CH D S C+ +
Sbjct: 386 YVESKVRMLVQKLEQHPSIALAHAFNKGYDRHHRCHSDQEIAAVQDGSLDYLCT-----E 440
Query: 354 RKQGVPVGEGEQFDIRLTVK 373
R + PVG+ E L +K
Sbjct: 441 RTEETPVGKSEPAVAELPIK 460
>gi|346322043|gb|EGX91642.1| Poly(A) polymerase [Cordyceps militaris CM01]
Length = 608
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/333 (44%), Positives = 217/333 (65%), Gaps = 9/333 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V GPG+DIDTL V P++ TRE D+F +LTEM +T++ V DA VP+
Sbjct: 89 GSFRLGVFGPGSDIDTLIVAPKYVTRE-DYFKYFPDLLTEMAPKDSITDITAVTDAFVPI 147
Query: 70 MKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+KF++SG+SIDL+++R+ + P+ D+ L+ DE +RSLNG RVTD+IL LVP
Sbjct: 148 IKFEYSGISIDLIFSRIIQKQLAPDFTDLRDSGFLRGLDEAELRSLNGTRVTDEILSLVP 207
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR LR ++ WA+RR VY N+ GF GG+ WA+LVAR+CQLYP A S++V++FF V
Sbjct: 208 EQSTFRLALRAIKLWAQRRAVYGNIMGFPGGVAWAMLVARVCQLYPKAATSVIVNKFFLV 267
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+QWRWP PVLL IE G L ++VW+P+ D +HLMPIITPAYP M +++N++ S++
Sbjct: 268 MSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGDSFHLMPIITPAYPSMCATFNITRSSMS 327
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKG 307
I+ E QRG EI E + + W LF TFF YK Y+ + +++ + + W G
Sbjct: 328 IIKRELQRGLEISEQVMVGKQ--PWSDLFVKHTFFTTGYKYYISVVSASKAKEPHKLWAG 385
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 340
++ES++R L K+E+H + L HP+ +S +
Sbjct: 386 YIESKVRMLVQKLEQHPHIAL-AHPYVKGYSRR 417
>gi|86171578|ref|XP_966239.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
gi|46361205|emb|CAG25069.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
Length = 631
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 178/483 (36%), Positives = 260/483 (53%), Gaps = 44/483 (9%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + V P +DID + + P++ TRE FF E + L + V +L +P+ + P
Sbjct: 159 LYTFGSYRLGVITPNSDIDCIFLAPQNLTRE-IFFNEFYLKLQQDRNVKKLQALPETYTP 217
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
+++F + V IDLL A L + + + D IL+N DE TVRSLNG RV D IL V
Sbjct: 218 IIQFMYDDVDIDLLLATLPYKTLKDCYYSLDNDHILKNLDEVTVRSLNGIRVADLILNSV 277
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P FR TLR ++ WAK RG+YSN+ GFLGGI+WALL A+ICQLYPN S L+ +FF+
Sbjct: 278 PNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGISWALLTAKICQLYPNFNVSQLICKFFK 337
Query: 188 VYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
VY+ W W PVLL I+ EG VWDP +N KDK H+MPIITPA+PCMNS++NV+
Sbjct: 338 VYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMPIITPAFPCMNSTHNVT 397
Query: 244 TSTLRIMMDEFQRGHEICEAMEKNEADVD------------------------WDTLFEP 279
T I+++EF+R H I + ME +E ++ W T+ EP
Sbjct: 398 YCTRNILIEEFKRAHSIIQYME-DENNIKSSIRMNKLWPNNNVNNINNSSNNVWMTILEP 456
Query: 280 FTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG-DFS 338
F YK++L I I N +WKGW+ES++R L K+E T N L+ P P F
Sbjct: 457 LDLFSTYKHFLHIQIMGINEFIYNSWKGWIESKIRLLFKKLE--TINELKIRPFPKFYFY 514
Query: 339 DKSKPLYC-SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY--TLRKP-GMQISVA 394
K K YC S+F+ L P F++ +++F + ++ P +I++
Sbjct: 515 KKEKSYYCSSFFIALIFFYKNPYENT--FNLSYAIRDFIDIALNWPQKVKYPNAFKINIM 572
Query: 395 HVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTH 454
+ R + F+ ++ +K ++ ++ ++H + G + K KQ D+ D H
Sbjct: 573 YQKRSQVLEFLDIVTKEENQKNKQVMENN---DKDETNHNQNGYRNNHKNKQFDE-YDDH 628
Query: 455 LRN 457
L N
Sbjct: 629 LFN 631
>gi|315043474|ref|XP_003171113.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
gi|311344902|gb|EFR04105.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
Length = 583
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 141/312 (45%), Positives = 206/312 (66%), Gaps = 7/312 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDA 65
+ G + V+GPG+DIDTL V P+H RE DFF +L + + ++ PVPDA
Sbjct: 86 IFTYGSYRLGVYGPGSDIDTLVVAPKHVMRE-DFFAHFPTVLEKFAPKDAIEKMTPVPDA 144
Query: 66 HVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILR 125
VP++K + SG+SIDL++ARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL
Sbjct: 145 FVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILE 204
Query: 126 LVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRF 185
LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +F
Sbjct: 205 LVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKF 264
Query: 186 FRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
FR+ QW WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++NVS S
Sbjct: 265 FRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMS 324
Query: 246 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRN 304
T +++ E +RG ++ + + + W LF +FF A YK YL I+ ++ +
Sbjct: 325 TKSVILRELRRGGDMVDKIFVGQR--RWSDLFARHSFFSADYKYYLSINSTSTTKEAQAI 382
Query: 305 WKGWVESRLRQL 316
W G VES+LR L
Sbjct: 383 WSGLVESKLRHL 394
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 350 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-P 407
+GL+ K P G DI FK + + +PG+ ++++HV +LP+ VF P
Sbjct: 470 IGLELKPLAP-GASRSLDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYDLPDDVFQP 528
Query: 408 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRK 443
G VRP+RP K + E+ VS A DG++
Sbjct: 529 GEVRPTRPKKKV---VKKAEQSVSQKRTIDAVDGQE 561
>gi|440634435|gb|ELR04354.1| hypothetical protein GMDG_06729 [Geomyces destructans 20631-21]
Length = 598
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 152/326 (46%), Positives = 213/326 (65%), Gaps = 11/326 (3%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V GPG+DIDTL VGP+H TR+ DFF +L M +T+L PV D+ VP+
Sbjct: 90 GSFRLGVFGPGSDIDTLVVGPKHVTRD-DFFKYFPDLLVTMSPPGAITDLTPVVDSFVPI 148
Query: 70 MKFKFSGVSIDLLYARLS-LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+KF+++G+SIDL+++R++ L IP+ L + ++L+ DE +RSLNG RVTD IL LVP
Sbjct: 149 IKFEYAGISIDLIFSRIAVLNQIPQSLTLQDSNLLRGLDEADLRSLNGTRVTDAILDLVP 208
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FRT LR ++ WA+RR +Y+N+ GF GG+ WA+LVAR+CQLYP A S +V +FFR+
Sbjct: 209 QKTIFRTALRGIKLWAQRRAIYANIIGFPGGVAWAMLVARVCQLYPKATSSTVVLKFFRI 268
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+W+WP PVLL I G L ++VW+PR D +HLMPIITPAYP M +++N++ ST
Sbjct: 269 MEKWQWPTPVLLTHIASGPLQVKVWNPRIYKHDSFHLMPIITPAYPSMCATHNITRSTKE 328
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRN-WK 306
I+ E +RG I + + + + W LF TFF E YK YL + ISA + +N W
Sbjct: 329 IIQRELKRGGNITDQIMSGK--LQWKDLFAKHTFFTEGYKYYLSV-ISASTTREAQNIWG 385
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHP 332
G VES++R L L +E H L HP
Sbjct: 386 GLVESKIRLLVLSLEGHDSIAL-AHP 410
>gi|196011858|ref|XP_002115792.1| hypothetical protein TRIADDRAFT_30173 [Trichoplax adhaerens]
gi|190581568|gb|EDV21644.1| hypothetical protein TRIADDRAFT_30173, partial [Trichoplax
adhaerens]
Length = 405
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 162/343 (47%), Positives = 217/343 (63%), Gaps = 10/343 (2%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PRH R FF +L EVT++ V DA VPV+K
Sbjct: 66 FGSYRLGVHTKGADIDALCVAPRHVDRTS-FFASFVDLLKSQTEVTQITVVEDAFVPVIK 124
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ +D+L+ARL L IPE+LD+ +L+N D + VRSLNGCRVTD IL LVP
Sbjct: 125 MVFDGIEMDMLFARLGLQNIPENLDLLDLELLRNLDMKCVRSLNGCRVTDAILSLVPNAD 184
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
+FRT LR ++ WAKRRG+YSN G+LGG++WA+LVAR CQLYPNAV + +V +FF V+ Q
Sbjct: 185 SFRTALRFIKLWAKRRGIYSNALGYLGGVSWAMLVARTCQLYPNAVAATIVQKFFLVFNQ 244
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W W PVLL + E L L W P N D+ LM IITP YP NS++NVS ST I++
Sbjct: 245 WNWQQPVLLTRMVESDLNLNGWTP-SNFSDRSQLMQIITPVYPHQNSTFNVSKSTKTILL 303
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
+E +RG +IC + A W FEP FF YK+Y+ + A + D+ + W G VES
Sbjct: 304 EEIERGLKICNEIFLRNA--KWTDAFEPADFFGRYKHYIVLTAKATSEDNYKEWIGLVES 361
Query: 312 RLRQLTLKIERHTY-NMLQCHP--HPGD---FSDKSKPLYCSY 348
+LR+L L +ER+ Y +++ +P +PGD ++ K L+C +
Sbjct: 362 KLRKLVLTLERNEYFDIVHINPKSYPGDPQRYAFWFKLLHCIF 404
>gi|268558234|ref|XP_002637107.1| C. briggsae CBR-PAP-1 protein [Caenorhabditis briggsae]
Length = 653
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 153/332 (46%), Positives = 214/332 (64%), Gaps = 16/332 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + VH GADIDTL V PRH R DFF +ML + P VTELH V +A VP
Sbjct: 88 LFTFGSYRLGVHSSGADIDTLAVVPRHIDRT-DFFTSFKEMLRQDPNVTELHGVEEAFVP 146
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
VMK K+SGV +D+L+ARL+L +P+ D+ D +L+N D+++VRSLNGCRV + +L+LVP
Sbjct: 147 VMKLKYSGVELDILFARLALKEVPDTQDLFDDQLLRNLDQESVRSLNGCRVAELLLKLVP 206
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ + F LR ++ WAK G+YSN GF GGI+WA+LVAR CQLYPNA S +V R F +
Sbjct: 207 RQKEFCIALRAIKLWAKNHGIYSNSMGFFGGISWAILVARACQLYPNASASRIVHRMFFI 266
Query: 189 YTQWRWPNPVLLCAIEEG-----SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
++ W WP+PVLL A+++ +L +WDPR+ D++HLMPIITPA+P NS++NV+
Sbjct: 267 FSTWTWPHPVLLSALDQDRNDIPTLCDLIWDPRKKNSDRFHLMPIITPAFPEQNSTHNVT 326
Query: 244 TSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID----ISAENA 299
ST I+ +E G EIC+ + E W+ LF+ FF YK+Y+ I I
Sbjct: 327 RSTCHIIRNEICEGLEICKDI--TEGKATWEDLFKEVKFFSRYKHYIGISDHGYIHRRRG 384
Query: 300 DDLRNWKGWVESRLRQLTLKIERHTYNMLQCH 331
+L W+ ++ESR+R L +ER+ ++L H
Sbjct: 385 IEL--WR-FLESRIRLLVQSLERNQ-DILIAH 412
>gi|341895379|gb|EGT51314.1| hypothetical protein CAEBREN_01393 [Caenorhabditis brenneri]
Length = 1333
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 156/413 (37%), Positives = 242/413 (58%), Gaps = 18/413 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
++ G + VH G DID++ + PR +R DFF L +L P V L+ V A VP
Sbjct: 897 VVSFGSYRLGVHSSGGDIDSVVIAPRQVSRT-DFFTSLKDILLRNPNVKNLNAVEKAFVP 955
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+M F+F+GV +DLL+ARL L VIPE +D++ D++L+N D+++VRSLNG RV +++L+LVP
Sbjct: 956 IMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQESVRSLNGVRVAEKLLQLVP 1015
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
++F TLR ++ WAK GVYSN GF GGI WALLVAR CQLYPNA PS LV + F V
Sbjct: 1016 NRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVARTCQLYPNATPSRLVQKVFYV 1075
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPR---RNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
++ W +P+P++LC + D RN D++HLMPIITPA+P NS++NVS S
Sbjct: 1076 FSTWNYPSPIVLCMPTRERPDMLALDNLCWGRNHADRFHLMPIITPAFPEQNSTHNVSRS 1135
Query: 246 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNW 305
T+ ++ E IC + E DW LFE F+ YK+++ + + A+ + ++
Sbjct: 1136 TMEVIKKEMADALIICNDV--FEGKCDWKFLFEEVNFYSQYKHFVVMKLDAKKEETENSY 1193
Query: 306 KGWVESRLRQLTLKIERHT-YNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGE 364
G++ESRLR L ER+ + +P + KS+ L +F+GL+ + V +
Sbjct: 1194 GGFLESRLRVLVGAFERNRGIKLAHLNPKKCQPTSKSQSL---WFIGLEFDEVV-----K 1245
Query: 365 QFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNLPNFVFPGGVRPSR 414
D+ + FK +++ + G +++ +++V R L ++ ++ R
Sbjct: 1246 NMDLTREIDNFKWNLNVQAKQIAGFEDVELDISYVKRSQLIKYLPAAELKKGR 1298
>gi|345563932|gb|EGX46915.1| hypothetical protein AOL_s00097g341 [Arthrobotrys oligospora ATCC
24927]
Length = 1294
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 149/316 (47%), Positives = 209/316 (66%), Gaps = 10/316 (3%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM-----PEVTE-LHPVPDAH 66
G + V GPG+DIDTL V P+ TRE DFF +L + P++ E L PVPDA
Sbjct: 771 GSYRLGVVGPGSDIDTLVVAPKLVTRE-DFFKFYPPLLKALNKPNEPQIIEELAPVPDAF 829
Query: 67 VPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 126
VP++KF SG+SIDL++ RL + +P D+ + ++L+ DE+ +RSLNG RVTD+IL L
Sbjct: 830 VPIIKFVMSGISIDLIFCRLGVTQVPADMSLEDKNLLRGLDEKELRSLNGTRVTDEILTL 889
Query: 127 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 186
VP F+ LR ++ WAK + +Y NV GF GG+ WA+LVARICQLYP+AV +++VS+FF
Sbjct: 890 VPAPAVFKHALRAIKIWAKCKAIYGNVYGFPGGVAWAMLVARICQLYPSAVSAVIVSKFF 949
Query: 187 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
R+ QW WP PVLL IE+G L ++VW+PR P DK HLMPIITPAYP M S++N++ ST
Sbjct: 950 RILGQWAWPQPVLLKPIEDGPLNVRVWNPRLYPSDKNHLMPIITPAYPSMCSTHNITPST 1009
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNW 305
++ E + +I + + + +W LFE TFF + YK YL ++ SA+ + W
Sbjct: 1010 KAAILGEMAKAADIVDRIITGKG--NWKQLFERHTFFTKDYKYYLAVNASAKEQEASVKW 1067
Query: 306 KGWVESRLRQLTLKIE 321
G VES++R L +K+E
Sbjct: 1068 SGLVESKIRHLVMKLE 1083
>gi|384497599|gb|EIE88090.1| hypothetical protein RO3G_12801 [Rhizopus delemar RA 99-880]
Length = 500
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 144/329 (43%), Positives = 212/329 (64%), Gaps = 13/329 (3%)
Query: 55 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 114
++ ++ PV DA VPV+KFK+SG+ ID + ARL+L I ED+D+ IL+ D ++RS+
Sbjct: 107 QIKDITPVTDAFVPVIKFKYSGIPIDFVCARLNLEEISEDIDLKDPEILRGLDAHSIRSI 166
Query: 115 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 174
NG RV D IL LVP + FR TLRC++ WA R+ VYSNV GFLGG+ WA+LVAR+CQLYP
Sbjct: 167 NGTRVADDILSLVPNMDTFRATLRCIKLWATRKAVYSNVLGFLGGVAWAILVARVCQLYP 226
Query: 175 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS--LGLQVWDPRRNPKDKYHLMPIITPA 232
+A S L+S+FF + T W WP+PV+L A+E+G + W+P+ NP D+ H MP+ITP+
Sbjct: 227 HASASTLISKFFHILTSWSWPSPVMLKAVEDGPAFANTKPWNPKLNPTDRSHRMPVITPS 286
Query: 233 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 292
YP M +++NV+ ST RI+ E ++ +I + + A W LFE +FF+ Y+ YL+I
Sbjct: 287 YPSMCTTHNVTQSTQRIITGEIKQAAKIVDKIMAGSA--KWPQLFEAHSFFKMYRQYLQI 344
Query: 293 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGL 352
+ A+N + W G VE+RLRQL +K+E ++++Q HP FS+ C Y
Sbjct: 345 TVVADNYELQLKWTGLVEARLRQLVIKLE-AIHSVMQVHPFMDGFSET-----CLYRTST 398
Query: 353 QRKQGVPVGEGEQFDIRLTVKEFKQAVSM 381
+ V V +GE++D T+ + K V +
Sbjct: 399 DK---VTVSQGEKYDNNRTIGKMKMEVDV 424
>gi|341895839|gb|EGT51774.1| hypothetical protein CAEBREN_25710 [Caenorhabditis brenneri]
Length = 527
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 163/434 (37%), Positives = 253/434 (58%), Gaps = 24/434 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
++ G + VH G DID++ + PR TR DFF L +L P V L+ V A VP
Sbjct: 91 VVSFGSYRLGVHSSGGDIDSVVIAPRQVTRS-DFFTSLKDILLRNPNVKNLNAVEKAFVP 149
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+M F+F+GV +DLL+ARL L VIPE +D++ D++L+N D+++VRSLNG RV +++L+LVP
Sbjct: 150 IMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQESVRSLNGVRVAEKLLQLVP 209
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
++F TLR ++ WAK GVYSN GF GGI WALLVAR CQLYPNA PS LV + F V
Sbjct: 210 NRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVARTCQLYPNASPSRLVQKVFYV 269
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPR---RNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
++ W +P+P++LC + D RN D++HLMPIITPA+P NS++NVS S
Sbjct: 270 FSTWNYPSPIVLCMPTRERPDMLTLDNLCWGRNHADRFHLMPIITPAFPEQNSTHNVSRS 329
Query: 246 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNW 305
T+ ++ E IC + E DW LFE F+ YK+++ + + A+ + ++
Sbjct: 330 TMEVIKKEMADALVICNDV--FEGKCDWKHLFEELNFYSQYKHFVVLKLDAKKEETENSY 387
Query: 306 KGWVESRLRQLTLKIERHT-YNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGE 364
G++ESRLR L ER+ + +P + K++ L +F+GL+ + V +
Sbjct: 388 GGFLESRLRVLVGAFERNRGIKLAHLNPKKCQPTSKAQSL---WFIGLEFDEVV-----K 439
Query: 365 QFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNLPNFVFPGGVRPSR--PSKGT 419
D+ + FK +++ + PG +++ +++V R L ++ ++ R +KG+
Sbjct: 440 NMDLTREIDNFKWNLNVQAKQIPGFEDVELDISYVKRSQLIKYLPAAELKKGRFHVAKGS 499
Query: 420 WDSRR----ALERK 429
D + L+RK
Sbjct: 500 SDDNKENAGVLKRK 513
>gi|146180895|ref|XP_001021673.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|146144391|gb|EAS01427.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 1765
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 144/337 (42%), Positives = 218/337 (64%), Gaps = 13/337 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L+ G K V+ +DIDT+C+ P R++ FFG+L +L EVTEL P+ +A VP
Sbjct: 1188 LLFFGSYKLKVNSHDSDIDTVCLVPNFVDRDQHFFGDLVNILQNRKEVTELFPIKEASVP 1247
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL-- 126
++K KFSG+ DL +AR E++D++ + +L + DE++ RS NGCRV + ++R
Sbjct: 1248 IIKMKFSGILFDLSFARAPPQYNGENIDLTSNQMLLSMDERSYRSFNGCRVAEWLIRKDN 1307
Query: 127 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 186
+ +NF+ TL+C++ WA RG+YSN+ G+L GI W +LVA+ICQLYPN P+ L+ RFF
Sbjct: 1308 IQNYENFKITLKCIKLWATNRGIYSNIIGYLSGIGWTILVAKICQLYPNYPPNQLIERFF 1367
Query: 187 RVYTQWRWPN-PVLLCAIEEG----SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYN 241
+Y+ W+W + PV + I+E L W P +D+ +M IITP +PCMN+++N
Sbjct: 1368 FLYSHWKWHDLPVYVEHIQEDVANTKLNADQWRPEF--RDRNSMM-IITPCFPCMNTAHN 1424
Query: 242 VSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD 301
VS +TLRI+ ++ Q G+ I ++KNE + LF+PF FF+ YK++L+I+I A N +D
Sbjct: 1425 VSPTTLRIIQEQLQYGNRIINKIKKNEK--TFSDLFKPFNFFKRYKHFLQINIVATNKND 1482
Query: 302 LRNWKGWVESRLRQLTLKIERHTYN-MLQCHPHPGDF 337
WKG VESRLR+LT E+ +N ++Q HP+P F
Sbjct: 1483 HIVWKGHVESRLRKLTKLFEQSIHNKLIQVHPYPNPF 1519
>gi|154316305|ref|XP_001557474.1| hypothetical protein BC1G_03738 [Botryotinia fuckeliana B05.10]
Length = 544
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 150/330 (45%), Positives = 213/330 (64%), Gaps = 9/330 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM-PE--VTELHPVPDAHVPV 69
G + V+GPG+DIDTL V P++ +REE +F +L EM PE + +L PVP+A VP+
Sbjct: 90 GSFRLGVYGPGSDIDTLVVVPKNVSREE-YFELFPDLLVEMAPEGAIEDLTPVPEAFVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWV-IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+KF++SG+SIDL++AR+ + I L ++ D++L DE +RSLNG RVTD IL LVP
Sbjct: 149 IKFEYSGISIDLIFARIEVLTQISRSLSLNDDNLLTGLDEAGLRSLNGTRVTDDILNLVP 208
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FRT LR ++ WA+RR +Y+N+ GF GG+ WA+LVAR+CQLYP A S ++ +FFR+
Sbjct: 209 EKAVFRTALRGVKLWAQRRAIYANIMGFPGGVAWAMLVARVCQLYPQATASTVILKFFRI 268
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+QW+WP PVLL AI+ G L ++VW+PR D YHLMPIITP+YP M +++N++ ST
Sbjct: 269 MSQWQWPQPVLLQAIKGGKLNVRVWNPRVYKGDGYHLMPIITPSYPSMCATHNITKSTKE 328
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKG 307
I+ E RG I + + +A W LF TFF + YK YL + ++ + W G
Sbjct: 329 IICRELARGGNITDRIMTGKA--SWKDLFVKHTFFTKNYKYYLSVISASTTKEAQLIWAG 386
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES++R L +E H L HP F
Sbjct: 387 LVESKVRLLVANVENHESIAL-AHPFNKGF 415
>gi|429961574|gb|ELA41119.1| hypothetical protein VICG_01818 [Vittaforma corneae ATCC 50505]
Length = 501
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 136/333 (40%), Positives = 212/333 (63%), Gaps = 8/333 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH +R+ DFF ++ L + V E+ + DA+VP
Sbjct: 80 IFTFGSYRLGVHDRGADIDVLCVVPRHVSRK-DFFTIFYEELGQDENVKEISKIEDAYVP 138
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ + G+ IDL +ARL+L VI E++ + D+IL++ DE+ + SLNG RVTD ILRL+P
Sbjct: 139 IISLTYDGIPIDLTFARLNLPVIAENISLLNDTILRSMDEKCILSLNGSRVTDAILRLIP 198
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
++ F + LR ++FWAKRR +Y N G+ GG+ +++ VARICQ+YPN +V +FF
Sbjct: 199 RVDVFHSALRAIKFWAKRRYIYGNAYGYFGGVTFSICVARICQMYPNLCAYDIVCKFFET 258
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y+ W+WP PV LC+I + + L+VWDP+ P DKYH MP+ITP YP +NS++NV+ ST
Sbjct: 259 YSSWKWPTPVQLCSIVDHNYNLKVWDPKVYPADKYHKMPVITPVYPSINSTHNVTQSTFI 318
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
++ E RG+E+ + + LFE FF+ +K ++ + I++E+ W+G+
Sbjct: 319 LICSELARGNELM------RSKAPFSKLFEVSGFFKKHKMFIEVRINSEDLQAFNIWEGY 372
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 341
++S++R L K+E + N+ P P F+ +S
Sbjct: 373 IQSKIRILCTKLE-NLENISLAAPFPKAFTGRS 404
>gi|324975490|gb|ADY62673.1| PAPa [Candida orthopsilosis]
Length = 372
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 137/282 (48%), Positives = 197/282 (69%), Gaps = 3/282 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+GP +DID L V PRH TRE DFF ++L PE+ E++ V +A VP
Sbjct: 83 IFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTVFEKILRGRPELEEINSVKEAFVP 141
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K +F+G+SIDLL+A+L + +P DL + ++L+N DE+ +R+LNG RVTD+ILRLVP
Sbjct: 142 IIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEKDMRALNGTRVTDEILRLVP 201
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
K F+ LR ++ WA++R VY+NV GF GG+ WA+LVARICQLYPNAV ++++ +FF++
Sbjct: 202 KPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVARICQLYPNAVSAVILEKFFQI 261
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y+QW WP PVLL IE+G L ++VW+PR D+ H MP+ITPAYP M +++N++ ST +
Sbjct: 262 YSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPAYPSMCATHNITNSTQK 321
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 290
I+M+EF RG EI + + W L E +FF YK YL
Sbjct: 322 IIMNEFNRGVEIIGEIFTGQK--VWSHLLERHSFFHQYKFYL 361
>gi|347827997|emb|CCD43694.1| similar to Poly(A) polymerase [Botryotinia fuckeliana]
Length = 573
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 150/330 (45%), Positives = 213/330 (64%), Gaps = 9/330 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM-PE--VTELHPVPDAHVPV 69
G + V+GPG+DIDTL V P++ +REE +F +L EM PE + +L PVP+A VP+
Sbjct: 90 GSFRLGVYGPGSDIDTLVVVPKNVSREE-YFELFPDLLVEMAPEGAIEDLTPVPEAFVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWV-IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+KF++SG+SIDL++AR+ + I L ++ D++L DE +RSLNG RVTD IL LVP
Sbjct: 149 IKFEYSGISIDLIFARIEVLTQISRSLSLNDDNLLTGLDEAGLRSLNGTRVTDDILNLVP 208
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FRT LR ++ WA+RR +Y+N+ GF GG+ WA+LVAR+CQLYP A S ++ +FFR+
Sbjct: 209 EKAVFRTALRGVKLWAQRRAIYANIMGFPGGVAWAMLVARVCQLYPQATASTVILKFFRI 268
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+QW+WP PVLL AI+ G L ++VW+PR D YHLMPIITP+YP M +++N++ ST
Sbjct: 269 MSQWQWPQPVLLQAIKGGKLNVRVWNPRVYKGDGYHLMPIITPSYPSMCATHNITKSTKE 328
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKG 307
I+ E RG I + + +A W LF TFF + YK YL + ++ + W G
Sbjct: 329 IICRELARGGNITDRIMTGKA--SWKDLFVKHTFFTKNYKYYLSVISASTTKEAQLIWAG 386
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES++R L +E H L HP F
Sbjct: 387 LVESKVRLLVANVENHESIAL-AHPFNKGF 415
>gi|340514098|gb|EGR44367.1| predicted protein [Trichoderma reesei QM6a]
Length = 620
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/316 (45%), Positives = 212/316 (67%), Gaps = 8/316 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL V P++ TRE D+F +L M +T+L V DA VP+
Sbjct: 89 GSFRLGVYGPGSDIDTLIVAPKYVTRE-DYFNYFPDLLVSMAPPGAITDLTVVKDAFVPI 147
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDS-ILQNADEQTVRSLNGCRVTDQILRLVP 128
+KF++SG+SIDL+++R+ I D D +DS +L+ DE +RSLNG RVTD+IL LVP
Sbjct: 148 IKFEYSGISIDLIFSRIIQKQISPDFDSLKDSSLLRGLDEAELRSLNGTRVTDEILDLVP 207
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR LR ++ WA+RR VY+N+ GF GG+ WA+LVAR+CQLYP A S++V++FF V
Sbjct: 208 EKSTFRLALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVCQLYPKATMSVIVNKFFLV 267
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QWRWP PVLL I+ G L ++VW+P+ D +HLMP+ITPAYP M +++N++ S++
Sbjct: 268 IGQWRWPQPVLLKPIDSGPLPVRVWNPKVYKGDSFHLMPVITPAYPSMCATFNITRSSMT 327
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRNWKG 307
I+ E +RG EI E + + W LF TFF + Y+ Y+ + ++++ + + W G
Sbjct: 328 IIQRELRRGLEISEQIMVGKR--PWSDLFVKHTFFTSGYRYYISVISASKDKEAHKIWSG 385
Query: 308 WVESRLRQLTLKIERH 323
+VES++R L K+E+H
Sbjct: 386 YVESKVRMLVQKLEQH 401
>gi|83285836|ref|XP_729897.1| poly(A) polymerase III [Plasmodium yoelii yoelii 17XNL]
gi|23489018|gb|EAA21462.1| poly(A) polymerase III [Plasmodium yoelii yoelii]
Length = 613
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/391 (40%), Positives = 219/391 (56%), Gaps = 50/391 (12%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + V P +DID + + P++ TRE FF E + L + V +L +P+ + P
Sbjct: 158 LYTFGSYRLGVITPNSDIDCIFLAPQNITREI-FFNEFYLKLQQDRNVKKLQALPETYTP 216
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPED-LDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
+++F + V IDLL A L + + + D IL+N DE TVRSLNG RV D IL V
Sbjct: 217 IIQFMYDDVDIDLLLATLPYRTLKDCCYTLDNDYILKNLDEVTVRSLNGIRVADLILNSV 276
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P NFR TLR ++ WAKRRG+YSN+ GFLGGI+WALL A+ICQ+YPN S L+ +FFR
Sbjct: 277 PNKDNFRNTLRFIKLWAKRRGIYSNILGFLGGISWALLTAKICQIYPNYNISQLICKFFR 336
Query: 188 VYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
VY+ W W PVL+ I+ EG +WDP +N KDK H+MPIITPA+PCMNS++NV+
Sbjct: 337 VYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEKNVKDKLHIMPIITPAFPCMNSTHNVT 396
Query: 244 TSTLRIMMDEFQRGHEICEAMEKN-EADVD------------------------------ 272
T I+++EF+R H I M+ N +AD+
Sbjct: 397 YCTRSILIEEFKRAHSIINYMDSNPDADISQVMEHVNNLMSHGNAININNVGKSGDNENV 456
Query: 273 ---------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 323
W + EPF F+ YK++L I I N WKGW+ES++R L K+E
Sbjct: 457 NIHNNNSSIWSCIIEPFDLFKTYKHFLHIQIMGTNELIYNLWKGWIESKIRLLFKKLE-- 514
Query: 324 TYNMLQCHPHPGDFS-DKSKPLYC-SYFMGL 352
T N L+ P P ++ K K YC S+F+ L
Sbjct: 515 TINELKIRPFPKFYTYKKDKFYYCSSFFIAL 545
>gi|322709453|gb|EFZ01029.1| Poly(A) polymerase [Metarhizium anisopliae ARSEF 23]
Length = 572
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/316 (46%), Positives = 212/316 (67%), Gaps = 8/316 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDF--FGELHQMLTEMPEVTELHPVPDAHVPVM 70
G + V GPG+DIDTL V P++ TRE+ F F +L + + +T+L V DA VP++
Sbjct: 89 GSFRLGVFGPGSDIDTLIVAPKYVTREDYFKYFPDLLEAMAPKGAITDLAAVTDAFVPII 148
Query: 71 KFKFSGVSIDLLYARLSLWVIPEDLDISQDS-ILQNADEQTVRSLNGCRVTDQILRLVPK 129
KF++SG+SIDL+++R+ + D QDS +L+ DE +RSLNG RVTD+IL LVP+
Sbjct: 149 KFEYSGISIDLIFSRIIQKQLAPDFQDLQDSGLLRGLDEAELRSLNGTRVTDEILTLVPE 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
F+ LR ++ WA+RR VY N+ GF GG+ WA+LVAR+CQLYP A S++V++FF V
Sbjct: 209 QSTFKLALRAIKLWAQRRAVYGNIMGFPGGVAWAMLVARVCQLYPKAATSVIVNKFFLVI 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
+QWRWP PVLL IE G L ++VW+P+ D +HLMP+ITPAYP M +++N+S S++ I
Sbjct: 269 SQWRWPQPVLLKPIESGPLPVRVWNPKIYKGDSFHLMPVITPAYPSMCATFNISRSSMAI 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRN-WKG 307
+ E +RG EI E++ + W LF TFF + YK Y+ + ISA + + N W G
Sbjct: 329 INRELRRGLEISESIMVGKR--PWSDLFVKHTFFTSDYKYYISV-ISASKSKEAHNVWSG 385
Query: 308 WVESRLRQLTLKIERH 323
+VES++R L K+E+H
Sbjct: 386 YVESKVRMLVQKLEQH 401
>gi|310798369|gb|EFQ33262.1| hypothetical protein GLRG_08406 [Glomerella graminicola M1.001]
Length = 631
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 137/320 (42%), Positives = 213/320 (66%), Gaps = 8/320 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDA 65
+ G + V+GPG+DIDTL V P++ TR D+F +L EM +T++ V DA
Sbjct: 90 IFTYGSYRLGVYGPGSDIDTLVVAPKYVTRA-DYFEIFPDLLKEMAPPGAITDMAVVADA 148
Query: 66 HVPVMKFKFSGVSIDLLYARLS-LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 124
VP++KF+FSG+SIDL+++R++ L +P+D ++ +L+ DE +RSLNG RVTD+IL
Sbjct: 149 FVPIIKFEFSGISIDLIFSRIAMLKQLPKDFNVQDSGLLRGLDEAELRSLNGTRVTDEIL 208
Query: 125 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSR 184
LVP+ F+ LR ++ WA+RR +Y+N+ GF GG+ WA+LVAR+CQLYP A S++V++
Sbjct: 209 SLVPEQATFKLALRAIKLWAQRRAIYANIMGFPGGVAWAMLVARVCQLYPKAASSVIVNK 268
Query: 185 FFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 244
FF + +W WP PVLL +E G L ++VW+P+ D++HLMP+ITPAYP M ++YN++
Sbjct: 269 FFHIMRRWPWPQPVLLKHVEGGPLQVRVWNPKLYKGDQFHLMPVITPAYPSMCATYNITR 328
Query: 245 STLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLR 303
S + ++ E QRG +I +A+ + W LF TFF + YK Y+ + S+ + + +
Sbjct: 329 SAMTVIQQELQRGCDITDAIMLGRS--PWSDLFVKHTFFTQGYKYYISVITSSTDKEAHK 386
Query: 304 NWKGWVESRLRQLTLKIERH 323
W G+VES++R L +E+H
Sbjct: 387 VWSGYVESKVRVLVQGLEQH 406
>gi|380471549|emb|CCF47226.1| hypothetical protein CH063_04087 [Colletotrichum higginsianum]
Length = 619
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 137/320 (42%), Positives = 212/320 (66%), Gaps = 8/320 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDA 65
+ G + V+GPG+DIDTL V P++ TR D+F +L EM +T++ V DA
Sbjct: 90 IFTYGSYRLGVYGPGSDIDTLVVAPKYVTRA-DYFEIFPDLLKEMAPPGAITDMAVVADA 148
Query: 66 HVPVMKFKFSGVSIDLLYARLS-LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 124
VP++KF+FSG+SIDL+++R++ L +P+D ++ +L+ DE +RSLNG RVTD+IL
Sbjct: 149 FVPIIKFEFSGISIDLIFSRIAMLKQLPKDFNVQDSGLLRGLDEAELRSLNGTRVTDEIL 208
Query: 125 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSR 184
LVP+ F+ LR ++ WA+RR +Y+N+ GF GG+ WA+LVAR+CQLYP A S++V++
Sbjct: 209 SLVPEQATFKLALRAIKLWAQRRAIYANIMGFPGGVAWAMLVARVCQLYPKAASSVIVNK 268
Query: 185 FFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 244
FF + +W WP PVLL +E G L ++VW+P+ D++HLMP+ITPAYP M ++YN++
Sbjct: 269 FFHIMRRWPWPQPVLLKQVEGGPLQVRVWNPKLYKGDQFHLMPVITPAYPSMCATYNITR 328
Query: 245 STLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLR 303
S + ++ E QRG +I +A+ W LF TFF + YK Y+ + S+ + + +
Sbjct: 329 SAMTVIQQELQRGCDITDAIMLGRN--PWSDLFVKHTFFTQGYKYYISVITSSTDKEAHK 386
Query: 304 NWKGWVESRLRQLTLKIERH 323
W G+VES++R L +E+H
Sbjct: 387 VWSGYVESKVRVLVQGLEQH 406
>gi|68070217|ref|XP_677020.1| poly(A) polymerase PAP [Plasmodium berghei strain ANKA]
gi|56496967|emb|CAH94131.1| poly(A) polymerase PAP, putative [Plasmodium berghei]
Length = 626
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/391 (40%), Positives = 219/391 (56%), Gaps = 50/391 (12%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + V P +DID + + P++ TRE FF E + L + V +L +P+ + P
Sbjct: 158 LYTFGSYRLGVITPNSDIDCIFLAPQNITRE-IFFNEFYLKLQKDRNVKKLQALPETYTP 216
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
+++F + V IDLL A L + + + D IL+N DE TVRSLNG RV D IL V
Sbjct: 217 IIQFMYDDVDIDLLLATLPYRTLKDCRYTLDNDYILKNLDEVTVRSLNGIRVADLILNSV 276
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P NFR TLR ++ WAKRRG+YSN+ GFLGGI+WALL A+ICQ+YPN S L+ +FFR
Sbjct: 277 PNKDNFRNTLRFIKLWAKRRGIYSNILGFLGGISWALLTAKICQIYPNYNISQLICKFFR 336
Query: 188 VYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
VY+ W W PVL+ I+ EG +WDP +N KDK H+MPIITPA+PCMNS++NV+
Sbjct: 337 VYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEKNVKDKLHIMPIITPAFPCMNSTHNVT 396
Query: 244 TSTLRIMMDEFQRGHEICEAMEKN-EADVD------------------------------ 272
T I+++EF+R H I M+ N +AD+
Sbjct: 397 YCTRSILIEEFKRAHSIINYMDLNPDADIGQVMEHVNNLMSYGNAININNVGKSGDNENV 456
Query: 273 ---------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 323
W + EPF F+ YK++L I I N WKGW+ES++R L K+E
Sbjct: 457 NIHNNSSSIWSCIIEPFDLFKTYKHFLHIQIMGTNELIYNLWKGWIESKIRLLFKKLE-- 514
Query: 324 TYNMLQCHPHPGDFS-DKSKPLYC-SYFMGL 352
T N L+ P P ++ K K YC S+F+ L
Sbjct: 515 TINELKIRPFPKFYTYKKDKFYYCSSFFIAL 545
>gi|296820828|ref|XP_002849998.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
gi|238837552|gb|EEQ27214.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
Length = 593
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 216/339 (63%), Gaps = 9/339 (2%)
Query: 4 YLPLVLIGLGYDKYSVHG-PGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTEL 59
Y P V+ G YS+ G+DIDTL V P+H RE DFF +L + + ++
Sbjct: 97 YGPAVMNGDISLMYSLRQFAGSDIDTLVVAPKHVMRE-DFFAHFPTVLEKFAPKDAIEKM 155
Query: 60 HPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRV 119
PVPDA VP++K + SG+SIDL++ARL + +P +LD+ +L+ DE+ +R +NG RV
Sbjct: 156 TPVPDAFVPIIKIEISGISIDLIFARLIVPSVPPNLDLKNKDLLRGLDEREIRCVNGTRV 215
Query: 120 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 179
TD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S
Sbjct: 216 TDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGS 275
Query: 180 MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSS 239
++V +FFR+ QW WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M ++
Sbjct: 276 VIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 335
Query: 240 YNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAEN 298
+N+S ST +++ E +RG ++ + + + W LF +FF YK YL I+ ++
Sbjct: 336 HNISMSTKAVILRELRRGGDMVDNIFVGQR--RWSDLFARHSFFSGDYKYYLSINSTSTT 393
Query: 299 ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 337
+ W G VES+LR L ++R + ++ HP P F
Sbjct: 394 KEAQAIWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 431
>gi|322695698|gb|EFY87502.1| Poly(A) polymerase [Metarhizium acridum CQMa 102]
Length = 570
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 144/316 (45%), Positives = 212/316 (67%), Gaps = 8/316 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDF--FGELHQMLTEMPEVTELHPVPDAHVPVM 70
G + V GPG+DIDTL V P++ TR++ F F +L + + +T+L V DA VP++
Sbjct: 89 GSFRLGVFGPGSDIDTLIVAPKYVTRDDYFKYFPDLLEAMAPKGAITDLAAVTDAFVPII 148
Query: 71 KFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
KF++SG+SIDL+++R+ + P+ D+ +L+ DE +RSLNG RVTD+IL LVP+
Sbjct: 149 KFEYSGISIDLIFSRIIQKQLAPDFQDLKDSGLLRGLDEAELRSLNGTRVTDEILTLVPE 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
F+ LR ++ WA+RR VY N+ GF GG+ WA+LVAR+CQLYP A S++V++FF V
Sbjct: 209 QSTFKLALRAIKLWAQRRAVYGNIMGFPGGVAWAMLVARVCQLYPKAATSVIVNKFFLVI 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
+QWRWP PVLL IE G L ++VW+P+ D +HLMP+ITPAYP M +++N+S S++ I
Sbjct: 269 SQWRWPQPVLLKPIESGPLPVRVWNPKIYKGDSFHLMPVITPAYPSMCATFNISRSSMAI 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRN-WKG 307
+ E +RG EI E++ + W LF TFF + YK Y+ + ISA + + N W G
Sbjct: 329 INRELRRGLEISESIMVGKQ--PWSDLFVKHTFFTSDYKYYISV-ISASKSKEAHNVWSG 385
Query: 308 WVESRLRQLTLKIERH 323
+VES++R L K+E+H
Sbjct: 386 YVESKVRMLVQKLEQH 401
>gi|341895922|gb|EGT51857.1| hypothetical protein CAEBREN_12609 [Caenorhabditis brenneri]
Length = 528
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 154/413 (37%), Positives = 241/413 (58%), Gaps = 18/413 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
++ G + VH G DID++ + PR +R DFF L +L P V L+ V A VP
Sbjct: 92 VVSFGSYRLGVHSSGGDIDSVVIAPRQVSRT-DFFTSLKDILIRNPNVKNLNAVEKAFVP 150
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+M F+F+GV +DLL+ARL L VIP+ +D++ D++L+N D+++VRSLNG RV +++L+LVP
Sbjct: 151 IMTFEFAGVDVDLLFARLDLAVIPDKIDLTDDNLLKNMDQESVRSLNGVRVAEKLLQLVP 210
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
++F TLR ++ WAK GVYSN GF GGI WALLVAR CQLYPNA PS LV + F V
Sbjct: 211 NRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVARTCQLYPNASPSRLVQKVFYV 270
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPR---RNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
++ W +P+P++LC + D RN D++HLMPIITPA+P NS++NVS S
Sbjct: 271 FSTWNYPSPIVLCMPTRERADMLTLDNLCWGRNHADRFHLMPIITPAFPEQNSTHNVSRS 330
Query: 246 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNW 305
T+ ++ E IC + + DW LFE F+ YK+++ + + A+ + ++
Sbjct: 331 TMEVIKKEMADALVICNDI--FDGKCDWKFLFEEVNFYSQYKHFVVMKLDAKKEETENSY 388
Query: 306 KGWVESRLRQLTLKIERHT-YNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGE 364
G++ESR RQL ER+ M +P + K++ L +F+GL+ V +
Sbjct: 389 GGFLESRFRQLIGAFERNRGIKMAHLNPKKCQPTSKAQSL---WFIGLEFDDVV-----K 440
Query: 365 QFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNLPNFVFPGGVRPSR 414
D+ + FK +++ + G +++ +++ R L ++ P ++ R
Sbjct: 441 NMDLTREIDNFKWNLNVQAKQIAGFEEVELDISYAKRSQLIKYMPPAELKKGR 493
>gi|358401751|gb|EHK51049.1| hypothetical protein TRIATDRAFT_288652 [Trichoderma atroviride IMI
206040]
Length = 572
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 172/492 (34%), Positives = 270/492 (54%), Gaps = 73/492 (14%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V GPG+DIDTL V P++ TRE D+F +L M +T+L V DA VP+
Sbjct: 89 GSFRLGVFGPGSDIDTLIVAPKYVTRE-DYFKYFPDLLVAMAPAGAITDLTVVTDAFVPI 147
Query: 70 MKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+KF++S +SIDL+++R+ + P+ D+ S+L+ DE +RSLNG RVTD+IL LVP
Sbjct: 148 IKFEYSDISIDLIFSRIIQKQISPDFADLKDSSLLRGLDEAELRSLNGTRVTDEILALVP 207
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ F+ LR ++ WA+RR VY+N+ GF GG+ WA+LVAR+CQLYP A S++V++FF V
Sbjct: 208 EEATFKLALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVCQLYPKAETSVIVNKFFLV 267
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QWRWP PVLL I G L ++VW+P+ D +HLMP+ITPAYP M +++N++ S++
Sbjct: 268 IGQWRWPQPVLLKPIGSGPLPVRVWNPKVYKGDSFHLMPVITPAYPSMCATFNITRSSMT 327
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKG 307
I+ E +RG EI E + + W LF TFF + Y+ Y+ + +++N + + W G
Sbjct: 328 IIQRELRRGLEISEEIMVGKR--PWSDLFVKHTFFTQGYRYYISVVSASKNKEAHKVWSG 385
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPH--------------------------------PG 335
+VES++R L K+E+H+ ++ HP G
Sbjct: 386 YVESKVRMLVQKLEQHS-SIALAHPFNKGYDRRHLCKNDHEIEQVQEGSLEFVIKDEGKG 444
Query: 336 DFSDKSKP----------------LY-CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQA 378
S++ P +Y ++++G++ ++G + D+ V EFK
Sbjct: 445 QTSEEKNPKLEENQDSSAPTSPVEVYTTTHYIGIELEEG-----AKSLDLSYQVDEFKVL 499
Query: 379 VSMYTLR----KPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHT 434
+ + +P + + V HV NLP+ VF G ++P K + S + +R +
Sbjct: 500 CTSWKKYEDELRPLVSLGVQHVRNFNLPDDVFEAG--ETKPQKKSAKSLASKKRGPTEDN 557
Query: 435 KPGADDGRKRKQ 446
P A KR+Q
Sbjct: 558 TPPA----KRQQ 565
>gi|341899942|gb|EGT55877.1| hypothetical protein CAEBREN_08096 [Caenorhabditis brenneri]
Length = 528
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 155/413 (37%), Positives = 243/413 (58%), Gaps = 18/413 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
++ G + VH G DID++ + PR +R DFF L +L P V L+ V A VP
Sbjct: 92 VVSFGSYRLGVHSSGGDIDSVVIAPRQVSRA-DFFTSLKDILIRNPNVKNLNAVEKAFVP 150
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+M F+F+GV +DLL+ARL L VIPE +D++ D++L+N D+++VRSLNG RV +++L+LVP
Sbjct: 151 IMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQESVRSLNGVRVAEKLLQLVP 210
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
++F TLR ++ WAK GVYSN GF GGI WA+LVAR CQLYPNA PS LV + F V
Sbjct: 211 NRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWAILVARACQLYPNASPSRLVQKVFYV 270
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPR---RNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
++ W +P+P++LC + D RN D++HLMPIITPA+P NS++NVS S
Sbjct: 271 FSTWNYPSPIVLCMPTRERPDMLALDNLCWGRNHADRFHLMPIITPAFPEQNSTHNVSRS 330
Query: 246 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNW 305
T+ ++ E IC + E DW LFE F+ YK+++ + + A+ + ++
Sbjct: 331 TMEVIKKEMTDALTICN--DVFEGKCDWKHLFEEVNFYSQYKHFVVMKLDAKKEETENSY 388
Query: 306 KGWVESRLRQLTLKIERHT-YNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGE 364
G++ESRLR L ER+ + +P + KS+ L +F+GL+ + V +
Sbjct: 389 GGFLESRLRVLVGAFERNRGIKLAHLNPKKCQPTSKSQSL---WFIGLEFDEVV-----K 440
Query: 365 QFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNLPNFVFPGGVRPSR 414
D+ + FK +++ + G +++ +++V R +L ++ ++ R
Sbjct: 441 NMDLTREINNFKWNLNVQAKQIAGFEDVELDISYVKRSHLIKYLPAAELKKGR 493
>gi|46122023|ref|XP_385565.1| hypothetical protein FG05389.1 [Gibberella zeae PH-1]
Length = 624
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 142/325 (43%), Positives = 212/325 (65%), Gaps = 9/325 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL V PR+ TRE D+F +L M +T++ V DA VP+
Sbjct: 89 GSYRLGVYGPGSDIDTLIVAPRYVTRE-DYFKYFPDLLVSMAPKDAITDMAVVTDAFVPI 147
Query: 70 MKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+KF++ G+SIDL+++R+ + P+ D+ +L+ DE +RSLNG RVTD+IL LVP
Sbjct: 148 IKFEYFGISIDLIFSRIIQKQLAPDFKDLKDSGLLRGLDEAELRSLNGTRVTDEILTLVP 207
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ F+ LR ++ WA+RR VY+N+ GF GG+ WA+LVAR+CQLYP A P+++V++FF V
Sbjct: 208 EQSTFKNALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVCQLYPKATPAVIVNKFFLV 267
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+QWRWP PVLL IE G L ++VW+P+ D +HLMP+ITPAYP M +++N++ S++
Sbjct: 268 ISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGDTFHLMPVITPAYPSMCATFNITRSSMT 327
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRNWKG 307
I+ E +R +I E++ W LF +FF A YK Y+ + +A+ + W G
Sbjct: 328 IINRELKRALQISESIMVGMR--PWSDLFAKHSFFTAGYKYYISVISAAKTKESHTIWSG 385
Query: 308 WVESRLRQLTLKIERHTYNMLQCHP 332
+VES++R L K+E+H L HP
Sbjct: 386 YVESKVRMLVQKLEQHQSIAL-AHP 409
>gi|358383352|gb|EHK21019.1| hypothetical protein TRIVIDRAFT_78180 [Trichoderma virens Gv29-8]
Length = 575
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 165/469 (35%), Positives = 258/469 (55%), Gaps = 65/469 (13%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V GPG+DIDTL V P++ TRE D+F +L M +T+L V DA VP+
Sbjct: 93 GSFRLGVFGPGSDIDTLIVAPKYVTRE-DYFKHFPDLLVSMAPPGSITDLTVVTDAFVPI 151
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDS-ILQNADEQTVRSLNGCRVTDQILRLVP 128
+KF++S +SIDL+++R+ I D D +DS +L+ DE +RSLNG RVTD+IL LVP
Sbjct: 152 IKFEYSDISIDLIFSRIIQKQISPDFDNLKDSSLLRGLDEAELRSLNGTRVTDEILALVP 211
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ F+ LR ++ WA+RR VY+N+ GF GG+ WA+LVAR+CQLYP A S++V++FF V
Sbjct: 212 EESTFKLALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVCQLYPKAATSVIVNKFFLV 271
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QWRWP PVLL I G L ++VW+P+ D +HLMP+ITPAYP M +++N++ S++
Sbjct: 272 IGQWRWPQPVLLKPIGSGPLPVRVWNPKVYKGDSFHLMPVITPAYPSMCATFNITRSSMS 331
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRNWKG 307
++ E +RG EI E + + W LF TFF + Y+ Y+ + ++++ + + W G
Sbjct: 332 VIQRELRRGLEISEQIMVGKR--PWSDLFVKHTFFTSGYRYYISVVSASKDKEAHKVWSG 389
Query: 308 WVESRLRQLTLKIERHTYNML--------------------------------------- 328
+VES++R L K+E+H L
Sbjct: 390 YVESKVRMLVQKLEQHPSIALAHAFNKGYDRRHRCKNDHEIEQVQEGSLEFMIKEESGSQ 449
Query: 329 --QCHPHP------GDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS 380
+ P P + S + ++++GL+ ++G + D+ V EFK +
Sbjct: 450 SGEIEPKPEVKDGSAETSSPVEVFTTTHYIGLELEEG-----AKSLDLSYQVDEFKVLCT 504
Query: 381 MYTLR----KPGMQISVAHVTRRNLPNFVF-PGGVRPSRPSKGTWDSRR 424
+ +P + + V HV NLP+ VF PG +P + S + +++
Sbjct: 505 QWKKYQEELQPSVSLGVQHVRNFNLPDDVFDPGEEKPQKKSAKSMANKK 553
>gi|342870120|gb|EGU73417.1| hypothetical protein FOXB_16055 [Fusarium oxysporum Fo5176]
Length = 635
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/315 (44%), Positives = 210/315 (66%), Gaps = 6/315 (1%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREE--DFFGELHQMLTEMPEVTELHPVPDAHVPVM 70
G + V+GPG+DIDTL V P++ TRE+ FF +L + +T++ V DA VP++
Sbjct: 89 GSYRLGVYGPGSDIDTLIVAPKYVTREDYFKFFPDLLLSMAPKDAITDMAVVTDAFVPII 148
Query: 71 KFKFSGVSIDLLYAR-LSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
KF++SG+SIDL+++R + + P+ D+ +L+ DE +RSLNG RVTD+IL LVP+
Sbjct: 149 KFEYSGISIDLIFSRVIQKQLSPDFKDLKDSGLLRGLDEAELRSLNGTRVTDEILTLVPE 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
F+ LR ++ WA+RR VY+N+ GF GG+ WA+LVAR+CQLYP A S++V++FF V
Sbjct: 209 QSTFKNALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVCQLYPKATFSVIVNKFFLVI 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
+QWRWP PVLL IE G L +++W+P+ D YHLMP+ITPAYP M +++N++ S++ I
Sbjct: 269 SQWRWPQPVLLKPIEGGPLPVRIWNPKLYKGDTYHLMPVITPAYPSMCATFNITRSSMAI 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRNWKGW 308
+ E +R +I E++ + W LF TFF A YK Y+ + +A+ + W G+
Sbjct: 329 INRELKRALQISESIMVGKR--PWSDLFVKHTFFTAGYKYYISVTSAAKTKEAHTIWSGY 386
Query: 309 VESRLRQLTLKIERH 323
VES++R L K+E+H
Sbjct: 387 VESKVRMLVQKLEQH 401
>gi|156101143|ref|XP_001616265.1| poly(A) polymerase PAP [Plasmodium vivax Sal-1]
gi|148805139|gb|EDL46538.1| poly(A) polymerase PAP, putative [Plasmodium vivax]
Length = 649
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 161/387 (41%), Positives = 218/387 (56%), Gaps = 46/387 (11%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + V P +DID + + P++ TRE FF E + L + V +L +P+ + P
Sbjct: 170 LYTFGSYRLGVITPNSDIDCIFLAPQNITRE-IFFNEFYLKLQQDRNVRKLQSLPETYTP 228
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
+++F + V IDLL A L + + + D IL+N DE TVRSLNG RV D IL V
Sbjct: 229 IIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDEVTVRSLNGIRVADLILASV 288
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P +FR TLR ++ WAK RG+YSN+ GFLGGI+WALL A+ICQLYPN S L+ +FFR
Sbjct: 289 PHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAKICQLYPNYNVSQLIGKFFR 348
Query: 188 VYTQWRWPNPVLLCAIE-----EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 242
VY+ W W PVL+ I +G VWDP +N KDK H+MPIITPA+PCMNS++NV
Sbjct: 349 VYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPEKNIKDKLHVMPIITPAFPCMNSTHNV 408
Query: 243 STSTLRIMMDEFQRGHEICEAMEKNE-ADVD----------------------------- 272
+ T I++DEF+R H I ME N A+V
Sbjct: 409 TYCTRSILIDEFKRAHYIINYMEANPGANVTFVMNQANGIVTPVSAPTTSSSTTGSGSIP 468
Query: 273 -----WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNM 327
W + +P F +YK++L I I A N +WKGW+ES++R L K+E T N
Sbjct: 469 GSGSMWTNILQPLDLFASYKHFLHIQIMATNELIYNSWKGWIESKIRLLFKKLE--TINE 526
Query: 328 LQCHPHPGDF-SDKSKPLYC-SYFMGL 352
L+ P+P + K K YC S+F+GL
Sbjct: 527 LKIRPYPKFYVYKKDKFYYCSSFFIGL 553
>gi|341899970|gb|EGT55905.1| hypothetical protein CAEBREN_16296 [Caenorhabditis brenneri]
Length = 526
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/412 (38%), Positives = 242/412 (58%), Gaps = 16/412 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
++ G + VH G DID++ + PR TR DFF L +L P V L+ V A VP
Sbjct: 90 VVSFGSYRLGVHSSGGDIDSVVIAPRQVTRT-DFFTSLKDILIRNPNVKNLNAVEKAFVP 148
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+M F+F+GV +DLL+ARL L VIP+ +D++ D++L+N D+++VRSLNG RV +++L+LVP
Sbjct: 149 IMTFEFAGVDVDLLFARLDLAVIPDKIDLTDDNLLKNMDQKSVRSLNGVRVAEKLLQLVP 208
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
++F TLR ++ WAK GVYSN GF GGI WA+LVAR CQLYPNA PS LV + F V
Sbjct: 209 NRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWAILVARTCQLYPNASPSRLVQKVFYV 268
Query: 189 YTQWRWPNPVLLCA-IEEGS--LGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
++ W +P+P++LC E S L L RN D++HLMPIITPA+P NS++NVS S
Sbjct: 269 FSTWNYPSPIVLCMPTRERSDMLALDNLCWGRNHADRFHLMPIITPAFPEQNSTHNVSRS 328
Query: 246 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNW 305
T+ ++ E IC + E DW LFE F+ YK+++ + + A+ + ++
Sbjct: 329 TMEVIKKEMADALVICNDI--FEGKSDWKFLFEEVNFYSQYKHFVVMKLDAKKEETENSY 386
Query: 306 KGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQ 365
G++ESRLR L ER+ L H +P SK +F+GL+ + V +
Sbjct: 387 GGFLESRLRVLVGAFERNRGIKL-AHLNPKKCQPTSKA-QSIWFIGLEFDEVV-----KN 439
Query: 366 FDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNLPNFVFPGGVRPSR 414
D+ + FK +++ + G +++ +++V R L ++ ++ R
Sbjct: 440 MDLTREIDNFKWNLNVQAKQIAGFEEVELDISYVKRSQLIKYLPAAELKKGR 491
>gi|302499084|ref|XP_003011538.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
gi|291175090|gb|EFE30898.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
Length = 700
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 169/472 (35%), Positives = 254/472 (53%), Gaps = 83/472 (17%)
Query: 23 GADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSI 79
G+DIDTL V P+H RE DFF +L + + ++ PVPDA VP++K + SG+SI
Sbjct: 107 GSDIDTLVVAPKHVMRE-DFFAHFPAVLEKHAPKDAIEKMTPVPDAFVPIIKIEISGISI 165
Query: 80 DLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 139
DL++ARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL LVP+ + FR LR
Sbjct: 166 DLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRA 225
Query: 140 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVL 199
++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+ QW WP PVL
Sbjct: 226 IKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVL 285
Query: 200 LCAIEEGSLGLQVWDPRRN-------PK------------DKYHLMPIITPAYPCMNSSY 240
L IE+G L ++VW+P+ PK D++HLMPIITPAYP M +++
Sbjct: 286 LKHIEDGPLHMKVWNPKVGSQLCFFIPKALTDFSFQIYHGDRFHLMPIITPAYPSMCATH 345
Query: 241 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENA 299
NVS ST +++ E +RG ++ + + + W LF +FF A YK YL I+ ++ +
Sbjct: 346 NVSMSTKAVILRELRRGGDMVDKIFVGQR--RWSDLFARHSFFSADYKYYLSINSTSTSK 403
Query: 300 DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF---------------------- 337
+ W G VES+LR L ++R + ++ HP P F
Sbjct: 404 EAQAIWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGFERVHICKTDEEVDAVKAGSMKY 462
Query: 338 -SDKSK---------PLYCSYFMGLQRKQGV-----PVGEGEQF---------------- 366
+D +K P + + G+ P GE +
Sbjct: 463 QADDTKTATTDETNDPTHIAAAENANENVGIAEAEKPTGENKYTLYTTTYYIGLELKPLA 522
Query: 367 -DIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-PGGVRPSRP 415
DI FK + + +PG+ ++++HV +LP+ VF PG RP+RP
Sbjct: 523 PDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYDLPDDVFQPGEARPTRP 574
>gi|256066067|ref|XP_002570474.1| poly(A) polymerase [Schistosoma mansoni]
gi|350644967|emb|CCD60333.1| poly(A) polymerase, putative [Schistosoma mansoni]
Length = 496
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/351 (43%), Positives = 211/351 (60%), Gaps = 10/351 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+ GADID+L V PR TREE FF + +L E V +LH V DA VP
Sbjct: 93 IFTFGSYRLGVNFRGADIDSLLVVPRFITREE-FFSDFQTVLAENSNVEDLHAVVDAFVP 151
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS--ILQNADEQTVRSLNGCRVTDQILRL 126
V+K KF GV IDLL+A++ IPE+ + +++ +++N DE+ VRS+NG RVT+ IL L
Sbjct: 152 VLKMKFMGVEIDLLFAQIDQMSIPENFSLCENTEVLMRNMDERDVRSINGVRVTEDILNL 211
Query: 127 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 186
V +F+ L+ +R WAKRR VYSN GFLGG++WA+LV+RICQLYP A PSM+V FF
Sbjct: 212 VYNKNSFKVALKVIRIWAKRRNVYSNALGFLGGVSWAILVSRICQLYPYATPSMIVYLFF 271
Query: 187 RVYTQWRWPNPVLLCAIEE-GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
+++QW WP PV L E SL L VWDPR NP D+YHLMPI+TP+YP NS+YNV S
Sbjct: 272 TIFSQWPWPKPVRLRECEYIASLCLPVWDPRLNPSDQYHLMPILTPSYPSQNSTYNVQRS 331
Query: 246 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNW 305
I+ E ++G + A ++ W LFE FF+ Y++Y+ + +
Sbjct: 332 NRIIIERELKQGLNVVRASMMHKG--SWSNLFEAAFFFQ-YRHYVVVIVVGNTKHTFIEL 388
Query: 306 KGWVESRLRQLTLKIERHTYNML---QCHPHPGDFSDKSKPLYCSYFMGLQ 353
G VESRLR L E + Y + CH + SD +F+G++
Sbjct: 389 CGLVESRLRVLVSNFEVNRYVKMAHVNCHAYGKGPSDDDANFVRKWFIGME 439
>gi|302665415|ref|XP_003024318.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
gi|291188368|gb|EFE43707.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
Length = 599
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 167/473 (35%), Positives = 253/473 (53%), Gaps = 84/473 (17%)
Query: 23 GADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSI 79
G+DIDTL V P+H RE DFF +L + + ++ PVPDA VP++K + G+SI
Sbjct: 107 GSDIDTLVVAPKHVMRE-DFFAHFPAILEKHAPKDAIEKMTPVPDAFVPIIKIEIFGISI 165
Query: 80 DLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 139
DL++ARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL LVP+ + FR LR
Sbjct: 166 DLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRA 225
Query: 140 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVL 199
++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+ QW WP PVL
Sbjct: 226 IKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVL 285
Query: 200 LCAIEEGSLGLQVWDPRRNPK--------------------DKYHLMPIITPAYPCMNSS 239
L IE+G L ++VW+P+ + D++HLMPIITPAYP M ++
Sbjct: 286 LKHIEDGPLHMKVWNPKVGSQLCFFFIPRALADFSFQIYHGDRFHLMPIITPAYPSMCAT 345
Query: 240 YNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAEN 298
+NVS ST +++ E +RG ++ + + + W LF +FF A YK YL I+ ++ +
Sbjct: 346 HNVSMSTKAVILRELRRGGDMVDKIFVGQR--RWSDLFARHSFFSADYKYYLSINSTSTS 403
Query: 299 ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF--------------------- 337
+ W G VES+LR L ++R + ++ HP P F
Sbjct: 404 KEAQAIWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGFERVHICKTDEEVDAVKAGSMK 462
Query: 338 --SDKSK---------PLYCSYFMGLQRKQGV-----PVGEGEQF--------------- 366
+D +K P + + G+ P GE +
Sbjct: 463 YQADDTKTATTDETNDPTHIAAAENANENVGIAEAEKPTGENKYTLYTTTYYIGLELKPL 522
Query: 367 --DIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-PGGVRPSRP 415
DI FK + + +PG+ ++++HV +LP+ VF PG VRP+RP
Sbjct: 523 APDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYDLPDDVFQPGEVRPTRP 575
>gi|408391167|gb|EKJ70549.1| hypothetical protein FPSE_09302 [Fusarium pseudograminearum CS3096]
Length = 711
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 142/325 (43%), Positives = 212/325 (65%), Gaps = 9/325 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL V PR+ TRE D+F +L M +T++ V DA VP+
Sbjct: 89 GSYRLGVYGPGSDIDTLIVAPRYVTRE-DYFKYFPDLLVSMAPKDAITDMAVVTDAFVPI 147
Query: 70 MKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+KF++ G+SIDL+++R+ + P+ D+ +L+ DE +RSLNG RVTD+IL LVP
Sbjct: 148 IKFEYFGISIDLIFSRIIQKQLAPDFKDLKDSGLLRGLDEAELRSLNGTRVTDEILTLVP 207
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ F+ LR ++ WA+RR VY+N+ GF GG+ WA+LVAR+CQLYP A P+++V++FF V
Sbjct: 208 EQSTFKNALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVCQLYPKATPAVIVNKFFLV 267
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+QWRWP PVLL IE G L ++VW+P+ D +HLMP+ITPAYP M +++N++ S++
Sbjct: 268 ISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGDTFHLMPVITPAYPSMCATFNITRSSMT 327
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRNWKG 307
I+ E +R +I E++ W LF +FF A YK Y+ + +A+ + W G
Sbjct: 328 IINRELKRALQISESIMVGMR--PWSDLFAKHSFFTAGYKYYISVISAAKTKESHTIWSG 385
Query: 308 WVESRLRQLTLKIERHTYNMLQCHP 332
+VES++R L K+E+H L HP
Sbjct: 386 YVESKVRMLVQKLEQHQSIAL-AHP 409
>gi|325180233|emb|CCA14636.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 677
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 165/427 (38%), Positives = 239/427 (55%), Gaps = 38/427 (8%)
Query: 7 LVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAH 66
L+L+ Y + V+ PGADIDT+CV P+ TRE DFF L ++ + +VT L+ + A
Sbjct: 90 LILVSGSY-RLGVNEPGADIDTICVAPQQITRE-DFFTSLKKIFMQHSKVTNLNAIEGAV 147
Query: 67 VPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 126
VP++ F + ++IDL A L IPEDL+I D IL D T +SLNG RVT+ +++L
Sbjct: 148 VPLLTFDYEEINIDLQIAILPRNTIPEDLNILNDQILVGVDAATEKSLNGPRVTELMIKL 207
Query: 127 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 186
P +F + LR +R WAKRRG+YSN G+LGG+NW +LV I QLYP A P+ L+ RFF
Sbjct: 208 TPNRDSFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPTTLLLRFF 267
Query: 187 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
V W+WP + LC E+ LGL+VW+ ++YH+MPI+TPAYP MNSS+NVST +
Sbjct: 268 MVLANWKWPLAIQLCKTEDVKLGLEVWNANVG-NNRYHVMPILTPAYPSMNSSFNVSTHS 326
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
L +M EF+R +I + + N V+WD LFE FF ++YL +D+ N +D + W
Sbjct: 327 LAVMKQEFERALKIVQEI-LNRGAVEWDPLFESSDFFAVQQHYLAVDVYTTNREDEQAWC 385
Query: 307 GWVESRLRQLTLKIERHTYNMLQCH---------------------PHPGDFSDKSKPLY 345
+ ESR+R+L IE Y + CH P D +++ K +
Sbjct: 386 SFCESRIRKL---IESLAYIPMLCHLRAFPKRFPLSFVGQDQDEKIETPTDRNNEEKETF 442
Query: 346 ----CSYF-MGLQRKQGVPVGEGEQFDIRLTVKEFKQA-VSMYTLRKPGMQISVAHVTRR 399
C Y + R+Q + I +V FK + + R M + + V +
Sbjct: 443 KYGACFYVGFDIDRRQ----LRSREVSIDSSVDYFKHNDLYRWNKRSDSMDVRITPVLWK 498
Query: 400 NLPNFVF 406
NLP++VF
Sbjct: 499 NLPDYVF 505
>gi|226479000|emb|CAX72995.1| poly (A) polymerase beta [Schistosoma japonicum]
Length = 704
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 164/418 (39%), Positives = 235/418 (56%), Gaps = 28/418 (6%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+ GADID+L V PR TREE FF + +L E P V +LH V DA VP
Sbjct: 89 IFTFGSYRLGVNFRGADIDSLLVVPRFITREE-FFSDFQTVLAENPNVEDLHAVVDAFVP 147
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS--ILQNADEQTVRSLNGCRVTDQILRL 126
V+K KF GV IDLL+A++ IPE+ + +++ +++N DE+ VRS+NG RVT+ IL L
Sbjct: 148 VVKMKFMGVEIDLLFAQIDQMSIPENFSLCENTEVLMRNMDERDVRSINGVRVTEDILNL 207
Query: 127 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 186
V +F+ L+ +R WAKRR VYSN GFLGG++WA+LV+RICQLYP A PSM+V FF
Sbjct: 208 VYNKNSFKVALKVIRIWAKRRNVYSNALGFLGGVSWAILVSRICQLYPYATPSMIVYLFF 267
Query: 187 RVYTQWRWPNPVLLCAIEE-GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
+++QW WP PV L E SL L VWDPR NP D+YHLMPI+TP+YP NS+YNV S
Sbjct: 268 TIFSQWPWPKPVRLRESEYIASLCLPVWDPRLNPSDQYHLMPILTPSYPSQNSTYNVQRS 327
Query: 246 TLRIMMDEFQRGHEICEA--MEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR 303
I+ E ++G + A M K W LFE FF+ Y++Y+ + +
Sbjct: 328 NRIIIERELKQGLNVVRASMMHKR----SWSNLFEAAFFFQ-YRHYVVVIVVGNVKHTFI 382
Query: 304 NWKGWVESRLRQLTLKIERHTY---NMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGV-- 358
G VESRLR L E + Y + C + +D +F+G++ +
Sbjct: 383 ELCGLVESRLRVLVSNFEVNRYVKMAHINCRAYGKGPNDDDANFVRKWFIGMEFDRNTNS 442
Query: 359 ---------PVGEGEQFDIRLT--VKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 405
GE ++ L+ + F++++ L + ++V +V + L F+
Sbjct: 443 LTSTVHNSNTAGEKPTLNVDLSENISSFEKSIER-GLSSEDLSVTVKYVKKSQLAQFI 499
>gi|346972005|gb|EGY15457.1| Poly(A) polymerase pla1 [Verticillium dahliae VdLs.17]
Length = 604
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 139/317 (43%), Positives = 215/317 (67%), Gaps = 8/317 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDF--FGELHQMLTEMPEVTELHPVPDAHVPVM 70
G + V+GPG+DIDTL V P++ TR++ F F L Q +T +T+L V DA VP++
Sbjct: 90 GSFRLGVYGPGSDIDTLVVVPKYVTRDDYFEIFPGLLQKMTPADAITDLAVVSDAFVPII 149
Query: 71 KFKFSGVSIDLLYARL-SLWVIPED--LDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
KF+F G+SIDL+++R+ SL +P+D ++ ++L+ DE+ +RSLNG RVTD+I+ LV
Sbjct: 150 KFEFFGISIDLIFSRIASLKQLPKDPQWSLADSNLLRGLDERELRSLNGTRVTDEIINLV 209
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P+ FR LR ++ WA+RR +Y+N+ GF GG+ WA+LVAR+CQLYP A S++V++FF
Sbjct: 210 PEPSTFRLALRAIKLWAQRRAIYANIMGFPGGVAWAMLVARVCQLYPKATSSVIVNKFFH 269
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
+ +W WP PVLL A+EEG L ++VW+P+ D++HLMPIITPAYP M +++N++ S +
Sbjct: 270 IMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYRGDQFHLMPIITPAYPSMCATFNITKSAM 329
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRNWK 306
++ E QRG EI + + ++ W LF TFF + YK Y+ + ++ + + W
Sbjct: 330 TVIQRELQRGCEITDNVMLSKR--PWGDLFIKHTFFTSGYKYYISVVTTSTTKEAHKIWS 387
Query: 307 GWVESRLRQLTLKIERH 323
G+VES++R L +E+H
Sbjct: 388 GYVESKVRVLVQGLEQH 404
>gi|378730028|gb|EHY56487.1| poly(A) polymerase [Exophiala dermatitidis NIH/UT8656]
Length = 611
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/319 (44%), Positives = 210/319 (65%), Gaps = 13/319 (4%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V GPG+DIDTL V PRH TRE DFF +L M VT L VPD+ VP+
Sbjct: 93 GSYRLGVFGPGSDIDTLAVAPRHVTRE-DFFEYFPAVLERMAGPGAVTSLTAVPDSFVPI 151
Query: 70 MKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+K +G+ IDL++A + SL IP+DL ++ +++L D+ TVR++ G RVTD+IL LVP
Sbjct: 152 IKLVLNGIEIDLIFASIASLQTIPKDLTLNDNNLLMGLDQPTVRAVTGPRVTDEILSLVP 211
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ + FRT LR ++ WA+RR +Y+N+ G+ GG+ WA+LVAR+CQLYP+AV + +V +FF V
Sbjct: 212 EHKTFRTALRAIKLWAQRRAIYANIVGYPGGVAWAMLVARVCQLYPHAVGATIVDKFFFV 271
Query: 189 YTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 243
+ W WP PV+L IE+ + G +VW+P P D+ ++MPIITPA+P M ++YN+S
Sbjct: 272 ISHWDWPTPVMLKDIEQLKNADLNKGFRVWNPAIYPGDRKNIMPIITPAFPSMCATYNIS 331
Query: 244 TSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDL 302
S +++++E +RG EI + +A W LF+ TFF A +K YL I S+ NAD
Sbjct: 332 KSGKKVILNELKRGGEITNKIFAGKA--KWSDLFKKHTFFTADHKYYLSITASSLNADSA 389
Query: 303 RNWKGWVESRLRQLTLKIE 321
+ W G VES++R +++E
Sbjct: 390 KAWAGLVESKVRIFVMQLE 408
>gi|348688850|gb|EGZ28664.1| hypothetical protein PHYSODRAFT_474162 [Phytophthora sojae]
Length = 694
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/424 (37%), Positives = 237/424 (55%), Gaps = 36/424 (8%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
+L+ Y + V+ PGADIDT+CV PRH TRE DFF L ++ + P+V+ L + A V
Sbjct: 91 ILVSGSY-RLGVNEPGADIDTICVAPRHVTRE-DFFSSLKEIFLQHPKVSNLVAIEGAIV 148
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
P++ F + ++IDL A L IPE+L+I D +L D T +SLNG RVT+ +++L
Sbjct: 149 PILTFDYEEINIDLQIAILPRNSIPENLNILDDHVLVGVDPATEKSLNGPRVTELMIKLT 208
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++F + LR +R WAKRRG+YSN G+LGG+NW +LV I QLYP A PS L+ RFF
Sbjct: 209 PNRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFM 268
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
V W+WP + LC + +LGL+VW+ ++Y +MPI+TPAYP MNSS+NVST +L
Sbjct: 269 VLNNWKWPLAIQLCKTHDANLGLEVWNANAG-HNRYQVMPILTPAYPSMNSSFNVSTHSL 327
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
+M +EF+RG I + + ++ +W LFEP FF +++YL +++ E ++ W G
Sbjct: 328 TVMKEEFKRGLTIVQDV-LSKGGSEWGPLFEPSDFFAVHQHYLAVEVYTEKQEEEAAWCG 386
Query: 308 WVESRLRQLTLKIERHTYNMLQC-----------------------HPHPGDFSDKSKPL 344
+ ESR+R+L +E YN C P+ + SK
Sbjct: 387 FCESRMRKL---VESLAYNPALCRLRAYTKKFPLSFVTGGEAPAGEQPNGAALAQPSKFG 443
Query: 345 YCSYF-MGLQRKQGVPVGEGEQFDIRLTVKEFKQA-VSMYTLRKPGMQISVAHVTRRNLP 402
C Y + R+Q + I +V+ FK + + R P M + V V + LP
Sbjct: 444 VCFYVGFDIDRRQ----LRSREVSIDNSVEYFKNNDLYRWNKRTPTMDVRVTPVVWKALP 499
Query: 403 NFVF 406
VF
Sbjct: 500 ESVF 503
>gi|221057822|ref|XP_002261419.1| putative poly(a) polymerase pap (poly(a) polymerase pap [Plasmodium
knowlesi strain H]
gi|194247424|emb|CAQ40824.1| putative poly(a) polymerase pap (poly(a) polymerase pap, putative
[Plasmodium knowlesi strain H]
Length = 637
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 158/377 (41%), Positives = 213/377 (56%), Gaps = 38/377 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + V P +DID + + P++ TRE FF E + L + V +L +P+ + P
Sbjct: 167 LYTFGSYRLGVITPNSDIDCIFLAPQNITRE-IFFNEFYLKLQQDKNVRKLQALPETYTP 225
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
+++F + V IDLL A L + + + D IL+N DE TVRSLNG RV D IL V
Sbjct: 226 IIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDEVTVRSLNGIRVADLILASV 285
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P +FR TLR ++ WAK RG+YSN+ GFLGGI+WALL A+ICQLYPN S L+ +FFR
Sbjct: 286 PHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAKICQLYPNYNVSQLICKFFR 345
Query: 188 VYTQWRWPNPVLLCAIE-----EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 242
VY+ W W PVL+ I +G VWDP +N KDK H+MPIITPA+PCMNS++NV
Sbjct: 346 VYSIWNWKYPVLIQNINKYNNVDGLRNFSVWDPEKNIKDKLHVMPIITPAFPCMNSTHNV 405
Query: 243 STSTLRIMMDEFQRGHEICEAMEKNE-ADVD---------------------------WD 274
+ T I++DEF+R H I ME N A+V W
Sbjct: 406 TYCTRSILIDEFKRAHYIINYMEMNPGANVTFVMNQANGVVTPVSAPSSSTTSSSSNIWT 465
Query: 275 TLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP 334
+ +P F YK++L I I A + +WKGW+ES++R L K+E T N L+ P+P
Sbjct: 466 NILQPLDLFGTYKHFLHIQIMATSELIYNSWKGWIESKIRLLFKKLE--TINELKIRPYP 523
Query: 335 GDF-SDKSKPLYCSYFM 350
+ K K YCS F
Sbjct: 524 KFYVYQKDKFDYCSSFF 540
>gi|398390670|ref|XP_003848795.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
gi|339468671|gb|EGP83771.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
Length = 559
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 140/314 (44%), Positives = 205/314 (65%), Gaps = 7/314 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQML---TEMPEVTELHPVPDAHVPV 69
G + V+GPG+DIDTL V PRH TRE DFF + +L T E+TEL PVP VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLMVAPRHVTRE-DFFEHMPTLLRQATTPDELTELTPVPGITVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + GVSIDL+++ L +P++L+++ +++L+ E +R +NG RVTD+IL+LVP+
Sbjct: 149 IKLELCGVSIDLIFSALDRASVPKNLELTDNNLLRGLTEVDLRCVNGTRVTDRILQLVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +Y NV GF GG+ +A++VARICQLYP A M+V +FF V
Sbjct: 209 TRVFRVALRAVKLWAQRRAIYGNVVGFPGGVAYAMMVARICQLYPRAAAPMIVQKFFFVI 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
+ W+WP + L E+G L + WDP N DK HLMP+ITPAYPCMNS+ ++ ST +
Sbjct: 269 SNWQWPRAITLQTREKGPLAEKEWDPTLNRWDKMHLMPVITPAYPCMNSTMSIMPSTKAV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGW 308
++ E +RGH+I E + + W LF FF EAY++Y+ + + + + + W G
Sbjct: 329 LLTELKRGHDIMEEIYGGKK--QWKDLFVKQKFFSEAYQHYICVITAGKTKEAQQAWSGL 386
Query: 309 VESRLRQLTLKIER 322
V+SRLR+L IE+
Sbjct: 387 VQSRLRRLIQGIEQ 400
>gi|170040884|ref|XP_001848213.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167864495|gb|EDS27878.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 395
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 211/329 (64%), Gaps = 13/329 (3%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + SV+ G +ID LCV PR+ R+ D+FG ++L + PE V +A VPV+K
Sbjct: 79 FGSYRLSVNHKGTNIDALCVAPRNIERQ-DYFGSFFELLKKQPEY---RAVEEALVPVVK 134
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
KF G+ IDLL+ARL+L IP++ D+ +D +L+N D + VRSLNGCR TD+ILR VP I
Sbjct: 135 MKFDGIKIDLLFARLALKEIPDNFDLREDMLLKNLDPKLVRSLNGCRATDEILRPVPNID 194
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR ++ WAK+ G+YSN G+ GG++W +LVAR CQL PN V + V +FF V+ +
Sbjct: 195 NFRLALRSIKLWAKKHGIYSNSLGYFGGVSWGMLVARTCQL-PNVVAATQVHKFFLVFLR 253
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
W+WP PV L + +LG QVWD R N +D++HLM IITPAYP NS+++VS+ST ++M+
Sbjct: 254 WKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMSIITPAYPQQNSTFHVSSSTRKVML 313
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
+EF +I + + +A WD LFE +FF Y+ ++ + +++ N DD ES
Sbjct: 314 NEFNSDMQITDEIMLGKA--GWDKLFEAPSFFFKYRYFIVLLVTSNNTDDHLE-----ES 366
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSDK 340
++R L +ER + L H +P F +
Sbjct: 367 KIRYLIQNLERILHINL-AHVNPKCFEQQ 394
>gi|224004590|ref|XP_002295946.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585978|gb|ACI64663.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 532
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 175/499 (35%), Positives = 255/499 (51%), Gaps = 56/499 (11%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L+ G + SVH P +DID L + P H TR+ DFF L V ELHPV A+ P
Sbjct: 48 LLSFGSYRLSVHTPSSDIDCLVLAPPHLTRD-DFFTTWVTALQNEARVKELHPVSGAYTP 106
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQ-------DSILQNADEQTVRSLNGCRVTD 121
V+KF+ GV IDL++ARL+ I ++ + D++L DE +VRS+NG RV
Sbjct: 107 VIKFEIEGVKIDLIFARLNEPTINNHDELDEIKEMELDDTLLIGLDETSVRSINGVRVAQ 166
Query: 122 QILRLV-------------PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 168
+L + ++ NFR TLR ++ WA+ G+YSNV GFLGG+NWA+LV
Sbjct: 167 YLLSTLETTDKNRKNYDSATQVDNFRLTLRAVKEWARVHGLYSNVLGFLGGVNWAILVCW 226
Query: 169 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYH 224
+C+ YP+A S L+ FF+ ++ W+WP PVLL + EG L VWDP N +D H
Sbjct: 227 VCKRYPDAPASTLLQIFFKTFSTWKWPMPVLLSTQKQRPPEGVNNLPVWDPSSNFRDAKH 286
Query: 225 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 284
LMPIITP YP MNSSYNV LR + DEF R ++C + W LFE FF+
Sbjct: 287 LMPIITPCYPSMNSSYNVGEPQLRRLRDEFARASKLCSDVAFGTK--KWGVLFEWNEFFQ 344
Query: 285 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSK-- 342
+ NYL++D A N DD R W G E+R+R L +E + ++ +P F +
Sbjct: 345 QHANYLQVDTVATNEDDFRAWFGLCEARMRLLIAGLESPGFG-VRAYPFAKFFHRREDGG 403
Query: 343 --PLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRN 400
S+F+ L+ V + D+ V +F ++ + R+P M + + V+R++
Sbjct: 404 GGNYIASFFIALRFANKV-----WKVDLAPLVTDFLTVINSWDGREPTMDLMIRLVSRKD 458
Query: 401 LPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKC 460
LP+FVF D+ + E KP + +D+V+ +
Sbjct: 459 LPSFVF--------------DAEKREEHITKPVLKPNNQQSSANRTDEDDVENQV----- 499
Query: 461 HATMPSSSGEFREGSPIMS 479
+AT PS+ +GS S
Sbjct: 500 NATTPSAKKNELDGSSTSS 518
>gi|301118192|ref|XP_002906824.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262108173|gb|EEY66225.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 691
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 174/503 (34%), Positives = 265/503 (52%), Gaps = 46/503 (9%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
+L+ Y + V+ PGADIDT+CV PRH TRE DFF L ++ + P+V++L + A V
Sbjct: 91 ILVSGSY-RLGVNEPGADIDTICVAPRHVTRE-DFFSSLKEIFLKHPKVSQLVAIEGAIV 148
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
P++ F + ++IDL A L IPE+L+I D +L D T +SLNG RVT+ +++L
Sbjct: 149 PLITFDYEEINIDLQIAILPRNSIPENLNILDDHVLVGVDPATEKSLNGPRVTELMIKLT 208
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P ++F + LR +R WAKRRG+YSN G+LGG+NW +LV I QLYP A PS L+ RFF
Sbjct: 209 PNRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFM 268
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
V W+WP + LC + LGL+VW+ ++Y +MPI+TPAYP MNSS+NVST +L
Sbjct: 269 VLNNWKWPLAIQLCKTHDAKLGLEVWNANAG-HNRYQVMPILTPAYPSMNSSFNVSTHSL 327
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
+M +EF+RG I + + ++ +W LFEP FF +++YL +++ E D+ + W
Sbjct: 328 TVMKEEFKRGLTIVQDV-LSKGGSEWGPLFEPSEFFAVHQHYLAVEVYTEKQDEEQAWCS 386
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQ-----RKQGVPVGE 362
+ ESR+R+L +E YN C +K SY + + G P +
Sbjct: 387 FCESRMRKL---VESLAYNPALCR-----LRVYTKKFSLSYVTAGEAPVGGQSNGQPPAQ 438
Query: 363 GEQF--------------------DIRLTVKEFKQA-VSMYTLRKPGMQISVAHVTRRNL 401
+F I +V+ FK + + R P M + V V + L
Sbjct: 439 PSKFGACFYVGFDIDRRQLRSREVSIDSSVEYFKNNDLYRWNKRTPTMDVRVTPVLWKAL 498
Query: 402 PNFVFP--GGVRPSRPSKGTW-----DSRRALERKVSSHTKPGADDGRKRKQTDDNVDTH 454
P VF GG +R ++ + + + E + P D+G ++ D++
Sbjct: 499 PESVFEEMGGRTVARAARREFMKKKKEEEKKAEEAAAPSPSPSGDEGTHSQEDGDDLTCS 558
Query: 455 LRNAKCHATMPSSSGEFRE-GSP 476
+ A M + G + GSP
Sbjct: 559 QKAASLATEMANGKGSISQPGSP 581
>gi|302409142|ref|XP_003002405.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
gi|261358438|gb|EEY20866.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
Length = 575
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 161/443 (36%), Positives = 258/443 (58%), Gaps = 40/443 (9%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDF--FGELHQMLTEMPEVTELHPVPDAHVPVM 70
G + V+GPG+DIDTL V P++ TR++ F F L Q +T +T+L V DA VP++
Sbjct: 90 GSFRLGVYGPGSDIDTLVVVPKYVTRDDYFEIFPGLLQKMTPADAITDLAVVSDAFVPII 149
Query: 71 KFKFSGVSIDLLYARL-SLWVIPED--LDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
KF+F G+SIDL+++R+ SL +P+D ++ ++L+ DE+ +RSLNG RVTD+I+ LV
Sbjct: 150 KFEFFGISIDLIFSRIASLKQLPKDPQWSLADSNLLRGLDERELRSLNGTRVTDEIINLV 209
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P+ FR LR ++ WA+RR +Y+N+ GF GG+ WA+LVAR+CQLYP A S++V++FF
Sbjct: 210 PEPSTFRLALRAIKLWAQRRAIYANIMGFPGGVAWAMLVARVCQLYPKATSSVIVNKFFH 269
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
+ +W WP PVLL A+EEG L ++VW+P+ D++HLMPIITPAYP M +++N++ S +
Sbjct: 270 IMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYRGDQFHLMPIITPAYPSMCATFNITKSAM 329
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRNWK 306
++ E QRG EI + + ++ W LF TFF + YK Y+ + ++ + + W
Sbjct: 330 TVIQRELQRGCEITDNVMLSKR--PWGDLFIKHTFFTSGYKYYISVVTTSTTKEAHKIWS 387
Query: 307 GWVESRLRQLTLK---------------IERHTYNMLQCHPHPGDFSDKSKPLYCSYFMG 351
G+VES++++ +L+ + T L P D + ++ G
Sbjct: 388 GYVESKVQEGSLQYLAGQETTETPNPEIVVAKTEGGLALDGLPLDGTTETGTEANGTGEG 447
Query: 352 LQRKQ--------------GVPVGEGEQ-FDIRLTVKEFKQAVSMYTLRKPGM-QISVAH 395
++ + G+ +GEG + D+ V FKQ + + ++V H
Sbjct: 448 VEEEVQTWPTNVFTTTHYIGLELGEGAKSLDLSYQVDSFKQLCGQWEKYSAKLNHLTVQH 507
Query: 396 VTRRNLPNFVF-PGGVRPSRPSK 417
V NLP+ +F PG +P + K
Sbjct: 508 VRNFNLPDDLFEPGEKKPQKQQK 530
>gi|429852211|gb|ELA27357.1| poly polymerase [Colletotrichum gloeosporioides Nara gc5]
Length = 632
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/322 (41%), Positives = 211/322 (65%), Gaps = 12/322 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDA 65
+ G + V+GPG+DIDTL V P++ TR D+F +L EM +T++ V DA
Sbjct: 90 IFTYGSFRLGVYGPGSDIDTLVVAPKYVTRS-DYFEIFPGLLKEMAPSDAITDMAVVEDA 148
Query: 66 HVPVMKFKFSGVSIDLLYARLS-LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 124
VP++KF+F G+SIDL+++R++ L +P++ ++ +L+ DE +RSLNG RVTD+IL
Sbjct: 149 FVPIIKFEFFGISIDLIFSRIAMLKQLPKEFNVQDSGLLRGLDEAELRSLNGTRVTDEIL 208
Query: 125 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSR 184
LVP+ F+ LR ++ WA+RR +Y+N+ GF GG+ WA+LVAR+CQLYP A S++V++
Sbjct: 209 SLVPEEATFKLALRAIKLWAQRRAIYANIMGFPGGVAWAMLVARVCQLYPKAASSVIVNK 268
Query: 185 FFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 244
FF + +W WP PVLL +E G L ++VW+P+ D++HLMP+ITPAYP M ++YN++
Sbjct: 269 FFHIMRRWPWPQPVLLKNVEGGPLQVRVWNPKVYKGDQFHLMPVITPAYPSMCATYNITR 328
Query: 245 STLRIMMDEFQRGHEICE--AMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADD 301
S + ++ E RG EI + + KN W LF TFF + YK Y+ + ++ + +
Sbjct: 329 SAMTVIQQELTRGCEITDNIMVGKN----PWSDLFVKHTFFTQGYKYYISVITASTDKEA 384
Query: 302 LRNWKGWVESRLRQLTLKIERH 323
+ W G+VES++R L +E+H
Sbjct: 385 HKIWSGYVESKVRVLVQGLEQH 406
>gi|389584571|dbj|GAB67303.1| poly(A) polymerase PAP [Plasmodium cynomolgi strain B]
Length = 628
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/366 (41%), Positives = 209/366 (57%), Gaps = 37/366 (10%)
Query: 3 RYLPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPV 62
+Y+ L G + V P +DID + + P++ TRE FF E + L + V +L +
Sbjct: 166 KYIHGNLYTFGSYRLGVITPNSDIDCIFLAPQNITRE-IFFNEFYLKLQQDKNVRKLQAL 224
Query: 63 PDAHVPVMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADEQTVRSLNGCRVTD 121
P+ + P+++F + V IDLL A L + + + D IL+N DE TVRSLNG RV D
Sbjct: 225 PETYTPIIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDEVTVRSLNGIRVAD 284
Query: 122 QILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSML 181
IL VP +FR TLR ++ WAK RG+YSN+ GFLGGI+WALL A++CQLYPN S L
Sbjct: 285 LILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAKVCQLYPNYNVSQL 344
Query: 182 VSRFFRVYTQWRWPNPVLLCAIE-----EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCM 236
+ +FFRVY+ W W PVL+ I +G VWDP +N KDK H+MPIITPA+PCM
Sbjct: 345 ICKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPEKNIKDKLHVMPIITPAFPCM 404
Query: 237 NSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE-ADVD----------------------- 272
NS++NV+ T I++DEF+R H I ME N A+V
Sbjct: 405 NSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVMNQANGIVTPVSTPSSNSSSS 464
Query: 273 ----WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML 328
W + +P F YK++L I I A N +WKGW+ES++R L K+E T N L
Sbjct: 465 SSSIWTNILQPLDLFATYKHFLHIQIMATNELIYNSWKGWIESKIRLLFKKLE--TINEL 522
Query: 329 QCHPHP 334
+ P+P
Sbjct: 523 RIRPYP 528
>gi|440468857|gb|ELQ37991.1| Poly(A) polymerase pla1 [Magnaporthe oryzae Y34]
Length = 611
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 137/322 (42%), Positives = 217/322 (67%), Gaps = 10/322 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDA 65
+ G + V GPG+DIDTL V PR+ TRE D+F +L EM +T+L V DA
Sbjct: 85 VFAYGSLRLGVWGPGSDIDTLVVAPRYVTRE-DYFEHFPGLLVEMAPPNAITDLSVVVDA 143
Query: 66 HVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDSILQNADEQTVRSLNGCRVTDQ 122
VP++KF+FSG+SIDL+++R+ ++ +P D ++S ++L+ DE+ +RS+NG RVTD+
Sbjct: 144 FVPIIKFEFSGISIDLIFSRIATMKQLPADPNWNLSDSNLLRGLDEKELRSVNGTRVTDE 203
Query: 123 ILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLV 182
I+ LVP+ FRT LR ++ WA+RR +Y N+ GF GG+ WA+LVAR+CQLYP A S++V
Sbjct: 204 IISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGVAWAMLVARVCQLYPRATASVVV 263
Query: 183 SRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 242
++FF + +W WP PVLL AIE+G L ++W+P+ P D+YHLMPIITPAYP M +++N+
Sbjct: 264 NKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLMPIITPAYPSMCATFNI 323
Query: 243 STSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADD 301
+ S+ ++ E + ++ + + + W LF+ TFF + +K Y+++ ++++ +
Sbjct: 324 TKSSKDVIGRELVKAADLTNLIMVGK--LPWKDLFQKHTFFTKDFKYYIQVIAASKDKES 381
Query: 302 LRNWKGWVESRLRQLTLKIERH 323
+ W G+VES++R L +ERH
Sbjct: 382 HKLWSGFVESKVRLLVQGLERH 403
>gi|389639278|ref|XP_003717272.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
gi|351643091|gb|EHA50953.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
Length = 616
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 137/322 (42%), Positives = 217/322 (67%), Gaps = 10/322 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDA 65
+ G + V GPG+DIDTL V PR+ TRE D+F +L EM +T+L V DA
Sbjct: 85 VFAYGSLRLGVWGPGSDIDTLVVAPRYVTRE-DYFEHFPGLLVEMAPPNAITDLSVVVDA 143
Query: 66 HVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDSILQNADEQTVRSLNGCRVTDQ 122
VP++KF+FSG+SIDL+++R+ ++ +P D ++S ++L+ DE+ +RS+NG RVTD+
Sbjct: 144 FVPIIKFEFSGISIDLIFSRIATMKQLPADPNWNLSDSNLLRGLDEKELRSVNGTRVTDE 203
Query: 123 ILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLV 182
I+ LVP+ FRT LR ++ WA+RR +Y N+ GF GG+ WA+LVAR+CQLYP A S++V
Sbjct: 204 IISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGVAWAMLVARVCQLYPRATASVVV 263
Query: 183 SRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 242
++FF + +W WP PVLL AIE+G L ++W+P+ P D+YHLMPIITPAYP M +++N+
Sbjct: 264 NKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLMPIITPAYPSMCATFNI 323
Query: 243 STSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADD 301
+ S+ ++ E + ++ + + + W LF+ TFF + +K Y+++ ++++ +
Sbjct: 324 TKSSKDVIGRELVKAADLTNLIMVGK--LPWKDLFQKHTFFTKDFKYYIQVIAASKDKES 381
Query: 302 LRNWKGWVESRLRQLTLKIERH 323
+ W G+VES++R L +ERH
Sbjct: 382 HKLWSGFVESKVRLLVQGLERH 403
>gi|156037648|ref|XP_001586551.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980]
gi|154697946|gb|EDN97684.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 573
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/334 (42%), Positives = 211/334 (63%), Gaps = 9/334 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDA 65
+ G + V+GPG+DIDTL V P++ +REE +F +L EM + +L PV +A
Sbjct: 86 IFTYGSFRLGVYGPGSDIDTLVVVPKNVSREE-YFEMFPDLLVEMAPKGAIEDLTPVQEA 144
Query: 66 HVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 124
+VP++KF++SG+SIDL++AR+ +L +P L + D++L D+ +RS+NG RVTD I+
Sbjct: 145 YVPIIKFEYSGISIDLIFARIDTLTQVPRTLTLKDDNLLTGLDDAGLRSVNGTRVTDDIM 204
Query: 125 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSR 184
LVP+ FR LR ++ WA+RR +Y+N+ GF GG+ WA+LVAR+CQLYP A S ++ +
Sbjct: 205 DLVPEKAVFRNALRGVKLWAQRRAIYANIMGFPGGVAWAMLVARVCQLYPQATASTIILK 264
Query: 185 FFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 244
FFR+ +W+WP PVLL I+ G L ++VW+PR D +HLMPIITP+YP M +++NV+
Sbjct: 265 FFRIMEKWQWPQPVLLQQIKNGKLNVRVWNPRVYKSDSFHLMPIITPSYPSMCATHNVTK 324
Query: 245 STLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLR 303
ST I+ E RG I + + +A W LF+ TFF + YK YL + ++ +
Sbjct: 325 STKEIICRELARGGNIVDRIMMGKA--PWKDLFQKHTFFTKNYKYYLSVISASTTKEAQL 382
Query: 304 NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 337
W G VES++R L +E H L HP F
Sbjct: 383 IWAGLVESKVRLLVTNLETHESIAL-AHPFNKGF 415
>gi|407919057|gb|EKG12314.1| hypothetical protein MPH_10619 [Macrophomina phaseolina MS6]
Length = 590
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 136/317 (42%), Positives = 206/317 (64%), Gaps = 11/317 (3%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVP 68
G + V+GPG+DIDTL + P+H TR+ DFF +L + + + PVPDA P
Sbjct: 89 FGSYRLGVYGPGSDIDTLVLAPKHVTRD-DFFAHFINVLERVAPSGAIEKFSPVPDAFTP 147
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K F G+ IDL++ARL++ +P DLD+ +S+L+ DE +RS+NG RVTD++L LVP
Sbjct: 148 IIKMDFMGIDIDLIFARLAIASVPLDLDLKDNSLLRGLDETDLRSVNGTRVTDEVLSLVP 207
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ + FR R ++ WA+RR +Y+N+ GF GGI WA++VARICQLYP A ++++ RFF +
Sbjct: 208 QPKIFRQVTRAVKLWAQRRAIYANIVGFPGGIAWAMMVARICQLYPMACAAVVLGRFFYL 267
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+ W WP P++L IE+G L ++VW+P+ P DK HLMPIITPAYP M +++N++ ST +
Sbjct: 268 MSTWPWPRPIMLKEIEDGPLQVRVWNPQIYPGDKRHLMPIITPAYPSMCATHNITHSTQK 327
Query: 249 IMMDEFQRGHEICEAM--EKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNW 305
++ E R +I + EK W LF+ TFF + +K YL I ++ + + NW
Sbjct: 328 VIKRELLRASQITSDILSEKRR----WRDLFDRHTFFTQDFKYYLSIVAASHDKEAQDNW 383
Query: 306 KGWVESRLRQLTLKIER 322
VES++R+L IE+
Sbjct: 384 SSSVESKVRKLVGLIEQ 400
>gi|402077328|gb|EJT72677.1| Poly(A) polymerase pla1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 633
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 138/322 (42%), Positives = 211/322 (65%), Gaps = 10/322 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDA 65
+ G + V GPG+DIDTL VGPR+ TRE D+F +L +M +T+L V +A
Sbjct: 85 VFAYGSLRLGVWGPGSDIDTLVVGPRYVTRE-DYFQHFPDLLVKMAPPGAITDLTVVEEA 143
Query: 66 HVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDSILQNADEQTVRSLNGCRVTDQ 122
VP++KF++ G+SIDL+++R+ +L +P D + D++L+ DE+ +RS+NG RVTD+
Sbjct: 144 FVPIIKFEYHGISIDLIFSRIATLKQLPSDPAWGLKDDNLLRGLDEKELRSVNGTRVTDE 203
Query: 123 ILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLV 182
IL LVP+ FRT LR ++ WA+RR +Y N+ GF GG+ WA+LVAR+CQLYP A S++V
Sbjct: 204 ILSLVPEQNIFRTALRAIKLWAQRRAIYGNIMGFPGGVAWAMLVARVCQLYPKATSSVIV 263
Query: 183 SRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 242
++FF + QW WP PVLL I +G L ++VW+PR D YHLMP+ITPAYP M +++NV
Sbjct: 264 NKFFSILLQWPWPQPVLLKPIGDGPLQVRVWNPRVYKGDSYHLMPVITPAYPSMCATFNV 323
Query: 243 STSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADD 301
+ S++ ++ E Q EI + + W +F TFF + +K Y+++ ++ + +
Sbjct: 324 TRSSMTVIKRELQLAAEITNNIMCSTK--PWKDMFAKHTFFTKDFKYYMQVISASRDKEA 381
Query: 302 LRNWKGWVESRLRQLTLKIERH 323
+ W G+VES++R L +ERH
Sbjct: 382 HKIWSGFVESKVRMLVQSLERH 403
>gi|119186325|ref|XP_001243769.1| hypothetical protein CIMG_03210 [Coccidioides immitis RS]
Length = 587
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 142/333 (42%), Positives = 206/333 (61%), Gaps = 20/333 (6%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDA 65
+ G + V+GPG+DIDTL VGP+H E DFF + L M + +L PVPDA
Sbjct: 86 IFAYGSYRLGVYGPGSDIDTLVVGPKHVAIE-DFFLDFPPTLERMAPKDSIEKLTPVPDA 144
Query: 66 HVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILR 125
+VP++K + SG+SIDL++ARL + IP DLD+ +L+ DE+ +R +NG RVTD+IL
Sbjct: 145 YVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNKELLRGLDEREIRCVNGTRVTDEILE 204
Query: 126 LVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRF 185
LVP+ + FR LR ++ WA+ G+ WA+LVAR+CQLYP A S++V +F
Sbjct: 205 LVPEKKTFRLALRAIKLWAQ------------SGVAWAMLVARVCQLYPQATGSVIVGKF 252
Query: 186 FRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
FR+ W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++NVS S
Sbjct: 253 FRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSLS 312
Query: 246 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRN 304
T +++ E +RG +I E + + + W LF TFF YK YL I S+ + +
Sbjct: 313 TKAVILRELKRGGDIVEKIFLGQ--LRWSDLFAKHTFFSKDYKYYLNITASSTSKEAQSV 370
Query: 305 WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 337
W G VE++LR L + +++ ++ HP P F
Sbjct: 371 WSGLVEAKLRHLVIALDKKA-SIDVAHPFPKGF 402
>gi|170059284|ref|XP_001865296.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167878124|gb|EDS41507.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 328
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 145/333 (43%), Positives = 209/333 (62%), Gaps = 14/333 (4%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
++ G + V+ A+ID LCV PR+ R+ D+FG ++L + PEVTE V + V
Sbjct: 9 MIYTFGSYRLGVNHKRANIDALCVAPRNIERQ-DYFGSFLELLKKQPEVTECRAVEEVLV 67
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
P +K G+ IDLL+ARL+L IP++ D+ +D +L+N D + VRSLN CR TD+ILRLV
Sbjct: 68 PDVKMNLDGIKIDLLFARLALKEIPDNFDLCEDMLLKNLDPKLVRSLNRCRATDEILRLV 127
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P I NFR LR + WAK+ G+YSN G+ GG++WA+LVAR CQL PN V + V +FF
Sbjct: 128 PNIDNFRLALRSTKLWAKKHGIYSNSLGYFGGVSWAMLVARTCQL-PNVVAATQVHKFFL 186
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
V+++W+W +PV L + +LG QVWDPR N + ++HLMPIITPAYP ST
Sbjct: 187 VFSRWKWSHPVFLKRPDTVNLGFQVWDPRVNVQGRFHLMPIITPAYP---------HSTR 237
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
++M++EF RG +I + + +A WD LFE +FF Y+ + + +++ N DDL W
Sbjct: 238 KVMLNEFSRGMQITDEIMLGKA--GWDKLFEAPSFFFKYRYIIVLLVTSNNTDDLLEWCE 295
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 340
VES++R L +ER + L H +P F +
Sbjct: 296 LVESKIRYLIQNLERILHINL-AHVNPKCFEQQ 327
>gi|449682525|ref|XP_002165152.2| PREDICTED: poly(A) polymerase gamma-like, partial [Hydra
magnipapillata]
Length = 351
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/336 (45%), Positives = 220/336 (65%), Gaps = 14/336 (4%)
Query: 79 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 138
IDLL+ARL+L IPEDLD+ +++L+N D + VRSLNGCRVTD+IL LVP I NFR TLR
Sbjct: 1 IDLLFARLALTTIPEDLDLLDENLLKNLDARCVRSLNGCRVTDEILHLVPNIANFRMTLR 60
Query: 139 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 198
++ WAK + VYSNV GFLGG++WA+LVARICQLYPNA+ + LV +FF +Y++W WP PV
Sbjct: 61 AIKLWAKNQFVYSNVLGFLGGVSWAMLVARICQLYPNAIAATLVQKFFLIYSKWAWPQPV 120
Query: 199 LLCAI-EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 257
LL + E L +WDPR NP D++HLMPIITPAYP NS++NVS S+ +M D F+RG
Sbjct: 121 LLKQMPTENKLNFPIWDPRMNPADRFHLMPIITPAYPQQNSTFNVSMSSRTVMQDAFKRG 180
Query: 258 HEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLT 317
++ E + + W LF P FF+ YK+Y+ + + +++ W+G VES++R L
Sbjct: 181 FQVMEEIYSKTS--TWKALFAPANFFQKYKHYIVLSAYSNSSEHHLEWEGLVESKIRILI 238
Query: 318 LKIERHTY-NMLQCHPHPGDFSDKSKPLYCS-YFMGLQRKQGVPVG-EGEQFDIRLTVKE 374
+ +ER+ + + +P D KS+ S +F+GL+ ++ P G + + DI ++
Sbjct: 239 VNLERNQFVKLAHVNPKSYDPILKSESGTVSRWFIGLEFQK--PEGTKNVKVDITAEIQY 296
Query: 375 F-----KQAVSMYTLRKPGMQISVAHVTRRNLPNFV 405
F KQA + R+ GM+ HV ++ L N++
Sbjct: 297 FTSTVHKQACQIAIFRE-GMRTEARHVKKKQLSNYL 331
>gi|323453660|gb|EGB09531.1| hypothetical protein AURANDRAFT_24142, partial [Aureococcus
anophagefferens]
Length = 402
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 151/343 (44%), Positives = 200/343 (58%), Gaps = 24/343 (6%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH PGADID++CV P H TRE DFF L ML E P+V L V A VP+M F
Sbjct: 56 GSYRLRVHEPGADIDSICVAPNHCTRE-DFFDTLKAMLLEHPQVENLRSVETAVVPIMTF 114
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP-KIQ 131
GV+IDLL+A L L IP LDI +D++LQ DE T +SLNG RVT+ I +LV +
Sbjct: 115 DLDGVNIDLLFAHLPLNAIPASLDIDEDAVLQGVDEATEKSLNGPRVTNLIYKLVSHNYE 174
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
+F LR R WAKRRG+YSN G+ GGIN+ +LVA ICQL+P A PS L+ +FF ++ +
Sbjct: 175 SFLQVLRVARVWAKRRGIYSNKLGYFGGINFNILVALICQLFPKATPSYLLCKFFAIFAK 234
Query: 192 WRWPNPVLLCAIEEGSLGLQVWD---PRRNPKDKYH-----LMPIITPAYPCMNSSYNVS 243
W WP P +LC + G +VW + + YH LMPI+TPAYP MNS+ NV+
Sbjct: 235 WDWPAPAILCRPLDHGYGFEVWGQNAEQLRGRMAYHNLRNNLMPIVTPAYPAMNSAANVN 294
Query: 244 TSTLRIMMDEFQRGHEIC--------EAMEKNEADVD-----WDTLFEPFTFFEAYKNYL 290
+ ++ DEF RG E+C E E D D WD L E FF+ Y YL
Sbjct: 295 PWSFAVLRDEFARGAEVCKRIVARHAELAENGAVDPDVGGPLWDELVEKTDFFDKYDAYL 354
Query: 291 RIDISAEN-ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP 332
+++ + +D N+KG++ SRLR+L K+ M+ P
Sbjct: 355 AVNVLGDGEKEDFDNFKGFLSSRLRKLVEKMGHLPLKMIHLFP 397
>gi|345490104|ref|XP_003426299.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Nasonia vitripennis]
Length = 383
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 147/383 (38%), Positives = 226/383 (59%), Gaps = 17/383 (4%)
Query: 47 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 106
H++L EV +L + +A V V+K F G+ ID+L+A L +P+ +D + D +L+
Sbjct: 4 HELLKSQKEVKDLRAIEEAFVXVIKMNFDGIEIDMLFAHLQGTKLPDPMDFTDDMLLKYL 63
Query: 107 DEQTVRSLNGCRVTDQILRLVPKIQNFR-TTLRCMRFWAKRRGVYSNVAGFLGGINWALL 165
D++ VRSLNGCRVT +IL+ V ++NFR TTL+ ++ AK G+YSNV G+LG ++WA+L
Sbjct: 64 DQKCVRSLNGCRVTKEILQSVSNLENFRLTTLKAIKLRAKNNGIYSNVLGYLGVVSWAIL 123
Query: 166 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK--Y 223
VAR CQLYPNA P+ L+ +FF +++ W WP PVLL ++++ +LGLQVWDPR N D+ Y
Sbjct: 124 VARTCQLYPNAAPATLIEKFFLIFSIWEWPRPVLLKSVKKVNLGLQVWDPRVNASDRPPY 183
Query: 224 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 283
HLMPIITPAYP NS++NV+ ST IM + + I + + +A WD LFEP FF
Sbjct: 184 HLMPIITPAYPQQNSTFNVTISTRTIMEEAIKTVLAITKDIAMGKA--SWDKLFEPSNFF 241
Query: 284 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 343
+ K+++ + S+ W G++ES++R L +R+ N+ H +P F P
Sbjct: 242 DEXKHFVILSASSLTNKMSIEWSGFIESKIRHLIGSFDRNP-NITFAHINPKSFP----P 296
Query: 344 LY-------CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHV 396
L C + +GL ++ + DI+ +K + V L K GM +V
Sbjct: 297 LKPEEDEHGCMWLIGLTFRKAEKLSIDLTSDIKSFIKTTEGQVKKSNLFKDGMSQEAKYV 356
Query: 397 TRRNLPNFVFPGGVRPSRPSKGT 419
R+NL N++ ++ R + +
Sbjct: 357 RRKNLSNYIAANQIKRGRKTSSS 379
>gi|167536365|ref|XP_001749854.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771569|gb|EDQ85233.1| predicted protein [Monosiga brevicollis MX1]
Length = 604
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/444 (35%), Positives = 243/444 (54%), Gaps = 54/444 (12%)
Query: 23 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 82
DIDTL P H RE FFG +Q+L E P VT+LH A VPV+K GV +DLL
Sbjct: 93 AGDIDTLLCFPHHIKRES-FFGTFYQLLKETPGVTDLHAAEGAFVPVIKLAMDGVELDLL 151
Query: 83 YARLSLWVIPEDLDISQDSILQNADE-QTVRSLNGCRVTDQILRLVPK-IQNFRTTLRCM 140
+A L + + L + +L+ E + +RS+NGCRV D +L ++P +Q FRT LR +
Sbjct: 152 FASLPVDRLEPTLSLQDVDLLKKIHEDEIMRSINGCRVADAVLEVMPSNLQTFRTALRAV 211
Query: 141 RFWAKR-------------RGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
+ WAK RGVYSNV G+ GGI+ +LV RICQLYPNA S ++ +FFR
Sbjct: 212 KLWAKHNLTRSNQTVRTSGRGVYSNVHGYFGGIHLVILVTRICQLYPNAAASTILCKFFR 271
Query: 188 VYTQW-----------------RWPN-PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 229
VY+ W W N P+ + +++ LG + WDPR NP+D+Y LMPII
Sbjct: 272 VYSDWYGSNWIKHAREIWLAHGEWMNSPIKIKDVDDLHLGKRQWDPRSNPRDRYDLMPII 331
Query: 230 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 289
TP YP N+++NV+ STL ++ EF RGH +C+ + + ++V W ++EP FF+ Y+ +
Sbjct: 332 TPVYPQQNAAFNVNESTLHRIVTEFSRGHRVCQDIMRASSNVPWSAVWEPIRFFDEYQYF 391
Query: 290 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDK---- 340
+R+ SA D ++G VES +R L L ++ +T N+ +P + +DK
Sbjct: 392 VRVVASAATESDRTEFEGLVESTVRHLVLNLQ-YTDNVAYAMAYPKAYHEDPVADKDGTE 450
Query: 341 --SKPLYCSYFMGLQ---RKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQ 390
+ P ++++ L+ +++G + D++ + F + V+M + M
Sbjct: 451 ATTGPWRTAWYLALEFGIKQEGRIEPAPSKLDLQGPLVAFYGRLRDRTVTMSRYDETTMN 510
Query: 391 ISVAHVTRRNLPNFVFPGGVRPSR 414
+ V + + LP +++PGGV P R
Sbjct: 511 VDVQAMKQSKLPGYLYPGGVNPHR 534
>gi|171686334|ref|XP_001908108.1| hypothetical protein [Podospora anserina S mat+]
gi|170943128|emb|CAP68781.1| unnamed protein product [Podospora anserina S mat+]
Length = 661
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 139/325 (42%), Positives = 207/325 (63%), Gaps = 12/325 (3%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL V P+H T E+ +F +L EM +T+L PVPDA VP+
Sbjct: 86 GSYRLGVYGPGSDIDTLVVAPKHVTTEQ-YFRLFPPLLVEMAPPGAITDLTPVPDAFVPI 144
Query: 70 MKFKFSGVSIDLLYARLS-LWVIPED--LDISQDSILQNADEQTVRSLNGCRVTDQILRL 126
+KF+FSG+SIDL++ + L IPED +++ +++L+ E VRSLNG RVTD+IL L
Sbjct: 145 IKFEFSGISIDLIFCSIKGLTQIPEDKSWNLTDNTLLRGLSENEVRSLNGTRVTDEILNL 204
Query: 127 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 186
VP+ F+ LR ++ WA+R+ +Y+N+ GF GG+ WA+LVAR+CQLYP A +++V++FF
Sbjct: 205 VPEPATFKLALRAIKLWAQRKAIYANIMGFPGGVAWAMLVARVCQLYPKATSAVVVNKFF 264
Query: 187 RVYTQWRWPNPVLLCAIEE--GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 244
+ +W WP PVLL IE VW+P+ D+ H MPIITPAYP M +++N++
Sbjct: 265 HIMLKWPWPLPVLLKDIEYNISVTRAPVWNPKLYSSDRNHRMPIITPAYPAMCATHNINR 324
Query: 245 STLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLR 303
S+ ++M E ++G ++ E + A W LF TFF + ++ YL + S+ D
Sbjct: 325 SSKVVIMQELEKGVQVTEEIMTGRA--PWKALFTKHTFFTSDFRYYLTVISSSRTKDAQN 382
Query: 304 NWKGWVESRLRQLTLKIERHTYNML 328
W G++ESR+R L KIE H +L
Sbjct: 383 VWSGFIESRVRVLVNKIENHAAIVL 407
>gi|397635329|gb|EJK71816.1| hypothetical protein THAOC_06705 [Thalassiosira oceanica]
Length = 629
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 160/440 (36%), Positives = 239/440 (54%), Gaps = 48/440 (10%)
Query: 6 PLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDA 65
P +L+ G + VH P AD+D L + PRHATR+ DFFG ++L + V +LHPV A
Sbjct: 150 PPILLSFGSYRLGVHTPDADVDCLVLAPRHATRD-DFFGSWVRILKQKKGVEDLHPVSSA 208
Query: 66 HVPVMKFKFSGVSIDLLYARLS--LWV------------------IPEDLDISQDSILQN 105
+ PV+KF GV IDL++A +S +W+ ++D+ DS+L
Sbjct: 209 YTPVIKFVMDGVKIDLIFASISNEVWLREHAQCVKSGDGGAEDGGSEREVDV-DDSLLVG 267
Query: 106 ADEQTVRSLNGCRVTDQILRLVP---KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 162
DE +VRS+NG RV +L + +++N+R TLR ++ WA+ +G+YSNV G+LGG+NW
Sbjct: 268 LDEASVRSVNGVRVAQYLLSTMSSPRQLENYRLTLRAVKEWARVQGMYSNVLGYLGGVNW 327
Query: 163 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSL------GLQVWDPR 216
A+LV +C +P+A + L+ FF + W WP+PV+L + VWDPR
Sbjct: 328 AILVCFVCIRHPDASSARLLHLFFETFANWNWPDPVMLTPEASRHVPPRNVDARPVWDPR 387
Query: 217 RNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD---- 272
N +DK H+MPIITP YP MNSS+NV LR M DEF+R + + A +
Sbjct: 388 ENYRDKLHVMPIITPCYPSMNSSFNVGEPGLRRMRDEFRRAARVSREILSGTATGEDGKK 447
Query: 273 -WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCH 331
W +LFE FF + YLR+D++A D+ W G E+R+R L +E + ++ +
Sbjct: 448 GWSSLFERSGFFGQHGAYLRVDVAATTEDEFLRWFGLCEARMRLLIAGLE---SDEIRAY 504
Query: 332 PHPGDFSDKSKPLYC-SYFMGLQRKQGV--PVGEGEQFDIRLTVKEFKQAVSMYTLRKPG 388
P + +K Y S+F+ L+ GV V GE+ V E+ V+ + R G
Sbjct: 505 PFARFYRRDTKEEYVSSFFVALRFASGVDRDVRWGER------VSEYLHVVNSFEGRTAG 558
Query: 389 MQISVAHVTRRNLPNFVFPG 408
M + + + R +LP FVF G
Sbjct: 559 MDLRLELLKRADLPRFVFDG 578
>gi|444722668|gb|ELW63351.1| Poly(A) polymerase gamma [Tupaia chinensis]
Length = 554
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 125/216 (57%), Positives = 167/216 (77%), Gaps = 1/216 (0%)
Query: 42 FFGELHQMLTE-MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 100
G+L+ ++ E + +V+E V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ D
Sbjct: 63 VLGKLNNLVKEWISDVSESKAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDD 122
Query: 101 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 160
S L++ D + +RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG+
Sbjct: 123 SRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGV 182
Query: 161 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 220
+WA+LVAR CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP
Sbjct: 183 SWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPS 242
Query: 221 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 256
D+YHLMPIITPAYP NS+YNVSTST +M++EF++
Sbjct: 243 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQ 278
>gi|449296009|gb|EMC92029.1| hypothetical protein BAUCODRAFT_78629 [Baudoinia compniacensis UAMH
10762]
Length = 594
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/321 (41%), Positives = 198/321 (61%), Gaps = 7/321 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GP +D+DTL V P+H TREE FF + +L + E+TEL PVP P+
Sbjct: 88 GSFRLGVYGPNSDVDTLMVAPKHVTREE-FFEYMPDLLRKSAAPGEITELVPVPGIGTPI 146
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K K GV IDL++ L + +P+ +D++ D++L+ D+ VR +NG RVT++IL+LVP+
Sbjct: 147 IKLKIQGVDIDLIFCSLQVQSVPDKMDLADDNLLRGLDDTDVRCVNGTRVTNRILQLVPQ 206
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +Y N+ G+ GG+ WA+LVAR+CQLYP AV ++V RFF +
Sbjct: 207 TKTFRYALRAIKLWAQRRAIYGNIVGYPGGVAWAILVARVCQLYPKAVAPLIVQRFFFIV 266
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
+W WP PV L E SL ++ WDP + D HLMPI+TPA P N+++ V ST +
Sbjct: 267 KRWNWPKPVFLQHKVESSLVIREWDPNTSRHDAGHLMPILTPAVPSTNTAHTVGPSTKMV 326
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGW 308
MM E +RG +I + W LFE FF AYK+Y+ + ++++ D W G
Sbjct: 327 MMRELERGEQIIADIYSKSK--PWKALFERHNFFTTAYKHYICVVTASKSKDAQDAWAGL 384
Query: 309 VESRLRQLTLKIERHTYNMLQ 329
V+S+++ L IE N ++
Sbjct: 385 VQSKIKWLVQGIESSDANSIE 405
>gi|453087599|gb|EMF15640.1| Poly(A) polymerase [Mycosphaerella populorum SO2202]
Length = 607
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/307 (43%), Positives = 202/307 (65%), Gaps = 8/307 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE-MP--EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL + P+H TRE DFF + M+ + +P ++TEL PVP VP+
Sbjct: 90 GSFRLGVYGPGSDIDTLMLSPKHVTRE-DFFEYMPDMIRQAIPAEDITELVPVPGIGVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + G+SIDL++ L +P +L+++ +L+ E ++ +NG RVTD+IL LVP+
Sbjct: 149 IKTEIEGISIDLIWCTLHKDRVPPNLELNDSELLRGLSETDLKCVNGTRVTDRILSLVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA++RG+Y NV G+ GG+ +A++VAR+CQLYP A S +V++FF V
Sbjct: 209 TRTFRIALRAVKMWAQKRGLYGNVYGYPGGVAYAMMVARVCQLYPRAAASTIVAKFFWVV 268
Query: 190 TQWRWPNPVLLCAIEEG-SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
W+WP+P+ L A E+G SL Q WDP++N +DK HLMP+ITPAYP MN+++ ++ ST
Sbjct: 269 KNWQWPSPIYLQAREKGPSLNQQEWDPQKNFRDKRHLMPVITPAYPVMNATHTITRSTKE 328
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKG 307
+++ E RGHEI + + W L FF AY++Y+ I +++ DD + W G
Sbjct: 329 VLIRELNRGHEIMADIYSGKK--QWRDLLIKHEFFTSAYQHYIVIVTASKTKDDQQAWAG 386
Query: 308 WVESRLR 314
V SRLR
Sbjct: 387 LVTSRLR 393
>gi|147856999|emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
Length = 604
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 150/397 (37%), Positives = 229/397 (57%), Gaps = 25/397 (6%)
Query: 12 LGYDKYS--VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 69
L Y Y VHGP +DID LCVGP A+ +DFF L ML PEV+E+H V DA VP+
Sbjct: 176 LTYGSYGLGVHGPESDIDALCVGPFFASMADDFFIVLRNMLESRPEVSEIHCVKDAKVPL 235
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
M+FKF G+S+DL YA+L L +PE+L++ L+N DE + +SL+G R + IL+LVP
Sbjct: 236 MRFKFDGISVDLPYAQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANECILQLVPN 295
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
++NF++ LRC++ WAKRRGVY N+ G+ GG++ A+L A +CQ P+A ++L+S FF+ +
Sbjct: 296 VENFQSILRCIKLWAKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLMSSFFKTF 355
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
+ W WP PV A+E+G L P ++ LMPI P P N++ ST
Sbjct: 356 SGWPWPTPV---ALEDGRL------PTGGTRETRALMPIQLPCSPYGYCHSNITKSTFYR 406
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 309
+ E GH + + + D DW+ +FEPF + + Y +++I +S+ N D+L +W GWV
Sbjct: 407 ITTELTLGHALTRDLLR--LDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWVGWV 464
Query: 310 ESRLRQLTLKIERHTYNMLQCHPHPGDF--SDKSKPLYCSYFMGLQRKQGVPVGEGEQFD 367
+SR R L K+E C P+P +F D +P +F G+Q G D
Sbjct: 465 KSRFRFLLAKVEEVQG---LCDPNPTEFIDPDAGEP-NVVFFWGVQP------GRINFSD 514
Query: 368 IRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 404
I + +F Q ++ + P +++++ + LP +
Sbjct: 515 IDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGY 551
>gi|269859597|ref|XP_002649523.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
gi|220067074|gb|EED44542.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
Length = 473
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 235/398 (59%), Gaps = 13/398 (3%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
++ G + VH GADID LCV PRH +R+ DFF + L E VTEL V DA+V
Sbjct: 82 IICTFGSYRLGVHDKGADIDALCVVPRHISRK-DFFNIFYNQLLEDSNVTELSKVEDAYV 140
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PV+K + + IDL AR++L V+ +LD+ D++L+ DE+ + S+NG RVTD +L L+
Sbjct: 141 PVIKMHYMDIPIDLTMARVNLPVVDSNLDLLNDTLLKTMDEKCILSINGSRVTDSMLNLI 200
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P + F LR ++FWAKRR +Y N G+ GG+ +++ VARICQLYPN +V ++F
Sbjct: 201 PNKETFHMALRAIKFWAKRRYIYGNAYGYFGGVAFSISVARICQLYPNKSSYDIVCKYFE 260
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
Y+ W WP P+LL I + L+VWD ++ P D+YH MPIITPAYP M S++NV ST
Sbjct: 261 YYSNWTWPEPILLKPIVDHHYNLKVWDNQKYPADRYHKMPIITPAYPSMCSTHNVFQSTF 320
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
++ EF+R EI + + D+ +F+ FF YK Y+ I + A+ + +++W G
Sbjct: 321 DLICREFRRSTEI---INNSINSTDFLQIFDNTDFFRKYKLYINIKVKADK-ESIKSWSG 376
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQ-RKQGVPVGEGEQF 366
+VES++R L K E +++ P P F K C++F+G++ K G + ++
Sbjct: 377 FVESKVRILCSKFEA-VESIVAAIPFPKPF---IKDETCNFFIGIEILKTG---SQNKKI 429
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 404
+ +KEF ++ + + M+I ++ ++++ F
Sbjct: 430 YVDGQIKEFIDFLNEWNGKTAIMKIEISAEKKKSMQTF 467
>gi|225432026|ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
gi|296083219|emb|CBI22855.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 230/398 (57%), Gaps = 27/398 (6%)
Query: 12 LGYDKYS--VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 69
L Y Y VHGP +DID LCVGP A+ +DFF L ML PEV+E+H V DA VP+
Sbjct: 135 LTYGSYGLGVHGPESDIDALCVGPFFASMADDFFIVLRNMLESRPEVSEIHCVKDAKVPL 194
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
M+FKF G+S+DL YA+L L +PE+L++ L+N DE + +SL+G R + IL+LVP
Sbjct: 195 MRFKFDGISVDLPYAQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANECILQLVPN 254
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
++NF++ LRC++ WAKRRGVY N+ G+ GG++ A+L A +CQ P+A ++L+S FF+ +
Sbjct: 255 VENFQSILRCIKLWAKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLMSSFFKTF 314
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
+ W WP PV A+E+G L P ++ LMPI P P N++ ST
Sbjct: 315 SGWPWPTPV---ALEDGRL------PTGGTRETRALMPIQLPCSPYGYCHSNITKSTFYR 365
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 309
+ E GH + + + D DW+ +FEPF + + Y +++I +S+ N D+L +W GWV
Sbjct: 366 ITTELTLGHALTRDLLR--LDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWVGWV 423
Query: 310 ESRLRQLTLKIERHTYNMLQ--CHPHPGDFSDK-SKPLYCSYFMGLQRKQGVPVGEGEQF 366
+SR R L K+E +Q C P+P +F D + +F G+Q G
Sbjct: 424 KSRFRFLLAKVEE-----VQGLCDPNPTEFIDPDAGGPNVVFFWGVQP------GRINFS 472
Query: 367 DIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 404
DI + +F Q ++ + P +++++ + LP +
Sbjct: 473 DIDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGY 510
>gi|170054796|ref|XP_001863293.1| Poly(A) polymerase beta [Culex quinquefasciatus]
gi|167874980|gb|EDS38363.1| Poly(A) polymerase beta [Culex quinquefasciatus]
Length = 375
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/321 (44%), Positives = 202/321 (62%), Gaps = 24/321 (7%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
LG + + +ID LCV PR+ R+ D+FG ++L + PEVTE V + VP +K
Sbjct: 23 LGRTGWPLTTILTNIDALCVAPRNIERQ-DYFGSFLELLEKQPEVTECRAVEEMLVPDVK 81
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ IDLL+ARL+L IP++ D+ +D +L+N D + +RSLNGCR TD+ILRLVP I
Sbjct: 82 MNFDGIKIDLLFARLALKEIPDNFDLREDMLLKNLDPKLMRSLNGCRATDEILRLVPNID 141
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
NFR LR + WAK+ G+YS G+ GG++WA+LVAR CQL PN VP L
Sbjct: 142 NFRLALRSTKLWAKKHGIYSTSLGYFGGVSWAMLVARTCQL-PNVVPVFL---------- 190
Query: 192 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
+ P+ V +LG QVWDPR N + ++ LMPIITPAYP NS+++VS+ST +IM+
Sbjct: 191 -KRPDTV--------NLGFQVWDPRVNVQGRFDLMPIITPAYPQQNSTFHVSSSTRKIML 241
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
+EF RG +I + + +A WD LFE +FF Y+ ++ + +++ N DDL W G VES
Sbjct: 242 NEFNRGMQITDEIMLGKA--GWDKLFEAPSFFFKYRYFIVLLVTSNNTDDLLEWCGLVES 299
Query: 312 RLRQLTLKIERHTY-NMLQCH 331
++R L +ER + N+ H
Sbjct: 300 KIRYLIQNLERILHINLAHVH 320
>gi|323452142|gb|EGB08017.1| hypothetical protein AURANDRAFT_27130 [Aureococcus anophagefferens]
Length = 449
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/349 (40%), Positives = 196/349 (56%), Gaps = 30/349 (8%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTE--LHPVPDAHVPV 69
G + VH P ADID + V PRH TR FF L L + + V DA+ PV
Sbjct: 104 FGSVRLDVHTPDADIDVVLVAPRHCTRRA-FFDTLVAALEGDAHIGAGGVMAVRDAYTPV 162
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + +DLL+A L+ +PE LD+ D++L+ DE +RSLNG RV + +L LVP
Sbjct: 163 VKLRVGATDVDLLFAPLACDELPEPLDVMDDAVLEGLDEAAIRSLNGARVAEMLLSLVPD 222
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
FR LR ++ WA+ +G+YSNV G LGG+N A+L A +CQ YPNA PS +V RFFR++
Sbjct: 223 PAVFRVALRAVKRWARCKGLYSNVLGLLGGVNCAILAAFVCQRYPNAAPSTVVGRFFRIF 282
Query: 190 TQWRWPNPVLLCAI---------EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY 240
W WPNPVL+ A E + W+PR NP+D+ HL PI+TPA+P MNSSY
Sbjct: 283 DGWDWPNPVLIAAPGAPPSSAGDESVASRYAAWNPRLNPRDRAHLAPIVTPAHPTMNSSY 342
Query: 241 NVSTSTLRIMMDEFQRGHEICEAMEK--------------NEADV--DWDTLFEPFTFFE 284
NV LR + DE +G E +EK AD+ W LF P FF
Sbjct: 343 NVGAPQLRAIKDELSKGLETTRRVEKLAAHWRADESPTGDRAADLRDAWRRLFAPSDFFA 402
Query: 285 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH 333
+++Y+++D+SA + LR W W ESRLR L + ++ Y ++ PH
Sbjct: 403 RHRHYVQVDVSAADDAGLRKWNAWCESRLRNLVVALDTPGY--VRARPH 449
>gi|255556450|ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative [Ricinus communis]
Length = 492
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/331 (41%), Positives = 202/331 (61%), Gaps = 15/331 (4%)
Query: 12 LGYDKYS--VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 69
L Y Y V+GP +DID +CVGP AT EDFF L ML PEV+ +H V DA VP+
Sbjct: 65 LTYGSYGLGVYGPESDIDAICVGPFFATLAEDFFIVLRNMLKNRPEVSNIHCVKDAKVPL 124
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
M+FKF G+SIDL YA+L + +P+++D+ L N DE + +SL+G R +IL+ VP
Sbjct: 125 MRFKFDGISIDLPYAQLKVLAVPDNVDMLNPFFLMNIDETSWKSLSGVRANQRILQFVPN 184
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
++NF++ LRC++ WA+RRGV N+ GFLGG++ A+L A +CQ YPNA S L+S FF Y
Sbjct: 185 LENFQSMLRCIKLWARRRGVCGNLNGFLGGVHLAILSAVVCQKYPNASVSALISNFFATY 244
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
W WP PV+L ++G + P + + MPI P P N++ ST
Sbjct: 245 ATWPWPTPVML---QDG-----MSSPAEDFIETRSFMPIRLPCSPHEYCHSNITKSTYYR 296
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 309
+ EF RGH + + + K D DW+ +FEPF + + Y +++I +SA + D++ +W GWV
Sbjct: 297 IRTEFLRGHSLTKDLLK--PDFDWNGIFEPFPYSKKYTRFVKIYLSAPDQDEVGDWVGWV 354
Query: 310 ESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 340
+SR R L LK+E QC P P +++D+
Sbjct: 355 KSRFRALLLKLEGLQG---QCDPSPVEYADR 382
>gi|395823522|ref|XP_003785035.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Otolemur garnettii]
Length = 735
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 155/388 (39%), Positives = 224/388 (57%), Gaps = 15/388 (3%)
Query: 23 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 82
GAD D LC PRH DFF ++ L EV +L V +A VPV+K F G ID+L
Sbjct: 112 GADTDALCAVPRHVN-XRDFFTSFYEKLKLQEEVKDLRAVEEAFVPVIKLCFDGTKIDIL 170
Query: 83 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 142
+ARL+L IPEDLD+ DS+L+ D + +RSLNGC++T++IL LV + NFR TLRC++
Sbjct: 171 FARLALQTIPEDLDLXDDSLLKRLDIRCIRSLNGCKITNEILHLVSNMDNFRLTLRCIKL 230
Query: 143 WAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCA 202
WAK VYSN+ GF+ G++WA+L AR CQLYP A+ S LV FF V+++W PNPVL+
Sbjct: 231 WAKHHTVYSNILGFVTGVSWAMLGARTCQLYPIAMASTLVHXFFLVFSKWEXPNPVLVKQ 290
Query: 203 IEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE 262
E+ +L L VWD R NP D+Y PIITPAYP NS+Y+ S ST ++++EF+ I +
Sbjct: 291 PEKCNLNLPVWDSRVNPSDRYQFAPIITPAYPQQNSTYSASISTQMVVVEEFKXSLSITD 350
Query: 263 AMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIER 322
+ + V+ LFE FF+ YK+Y+ + A W G VES++ L +E+
Sbjct: 351 XL---LSKVEXSKLFEAPIFFQKYKDYIVLLAGAPTEKQRLEWVGLVESKIXILIGSLEK 407
Query: 323 HTYNML-----QCHPHPGDFSDKSKPLYCS-YFMGLQRKQG---VPVGEGEQFDIRLTVK 373
+ + L Q P P + DK + +C+ + +GL K+ + DI+
Sbjct: 408 NEFITLAHVNPQAFPAPKENPDKKE--FCTVWVIGLVFKKTENYKNLSVNLXHDIQAFTD 465
Query: 374 EFKQAVSMYTLRKPGMQISVAHVTRRNL 401
+ + + M+I+ HV R+ L
Sbjct: 466 TVYRQARNSKMFEVDMRIAATHVKRKQL 493
>gi|397574427|gb|EJK49202.1| hypothetical protein THAOC_31949 [Thalassiosira oceanica]
Length = 843
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 166/448 (37%), Positives = 232/448 (51%), Gaps = 56/448 (12%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGE-------------------------LH 47
G + VH PGADIDT+ V P +R+ DFFG L
Sbjct: 97 GSYRLGVHEPGADIDTIAVAPSFCSRD-DFFGSNYVPPGDAMDEGDDEDGEQARDPDSLA 155
Query: 48 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 107
+ + P VT PV +A VP++ F + G++IDLL+ARLS IP + DI D +L D
Sbjct: 156 ERIRRQPHVTNFVPVENAAVPILTFDWEGINIDLLFARLSTSSIPRNFDIDNDLVLSGVD 215
Query: 108 EQTVRSLNGCRVTDQILRLV----PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 163
T +SLNG RVT+ I LV + Q F T +R +R WAK RG+YSN G+ GG+N
Sbjct: 216 AATEKSLNGPRVTNLIAALVGGTEQRYQTFLTVVRLVRKWAKNRGLYSNKMGYWGGVNIN 275
Query: 164 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 223
+ VA + QLYPNA P+ + +FF V+ WRWPNPV+L + LGLQVW+ + +
Sbjct: 276 MAVALVLQLYPNACPASALRKFFLVFKSWRWPNPVMLTRPHDAELGLQVWNSHQ-AANMR 334
Query: 224 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEK-------NEADVD---- 272
+ P+ITPAYP MNS+ +VS TL+I+ +EF RGH I + + K + ADV+
Sbjct: 335 QVAPMITPAYPAMNSTLSVSRQTLQILHEEFCRGHGIVDKLYKDYQRGAIDPADVESGGM 394
Query: 273 WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP 332
W LFEP FF AY YL + I+ D + W G+VESRLR+L + + + +
Sbjct: 395 WGELFEPSDFFIAYPYYLSLCITGPTLHDAQAWAGFVESRLRKLVSDMLGRSLPLSKIQL 454
Query: 333 HPGDF----SDKSKPLY-------CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ-AVS 380
P F +DK+ L +YF+G + + GEQ DI + F++ +
Sbjct: 455 WPKKFDVCCADKTALLTHAQRANSITYFIGFRVDK--LRMRGEQLDIERQLSNFRKFELG 512
Query: 381 MYTLRKPGMQISVAHVTRRNLPNFVFPG 408
+ PGM I + LP F G
Sbjct: 513 RFHPLVPGMDILPKSFGVKELPTICFDG 540
>gi|164423119|ref|XP_959011.2| Poly(A) polymerase [Neurospora crassa OR74A]
gi|157069956|gb|EAA29775.2| Poly(A) polymerase [Neurospora crassa OR74A]
Length = 632
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 136/324 (41%), Positives = 207/324 (63%), Gaps = 12/324 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDA 65
+ G + V+GPG+DIDTL V P++ T ++ +F +L EM +T+L PVP+A
Sbjct: 86 IFTYGSFRLGVYGPGSDIDTLVVVPKYVTVKQ-YFDIFPNLLVEMAPPGAITDLTPVPEA 144
Query: 66 HVPVMKFKFSGVSIDLLYARL-SLWVIPEDLD--ISQDSILQNADEQTVRSLNGCRVTDQ 122
VP++KF++SG+SIDL++ + SL +P+D D ++ +++L+ E VRSLNG RVTD+
Sbjct: 145 FVPIIKFEYSGISIDLIFCSIQSLRQLPDDKDWNLNSNNLLRGLSENEVRSLNGTRVTDE 204
Query: 123 ILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLV 182
IL LVP+ + F+ LR ++ WA+RR +Y+N+ G+ GG+ WA+LVAR+CQLYP A +++V
Sbjct: 205 ILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGVAWAMLVARVCQLYPKATSAVIV 264
Query: 183 SRFFRVYTQWRWPNPVLLCAIE--EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY 240
+FF + W WP PVLL IE + + VW+P+ P D+ H MPIITP+YP M +++
Sbjct: 265 RKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRNHKMPIITPSYPSMCATH 324
Query: 241 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENA 299
NV S++ ++ E +RG +I E + + W LFE TFF +K YL + S
Sbjct: 325 NVGRSSMAVIQQELERGVQISEEIMLGKR--PWKDLFEKHTFFTNGFKFYLTVISSGRTK 382
Query: 300 DDLRNWKGWVESRLRQLTLKIERH 323
+ W G+VESR+R L K+E H
Sbjct: 383 EAQNTWSGFVESRVRVLVQKLELH 406
>gi|336470057|gb|EGO58219.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2508]
gi|350290251|gb|EGZ71465.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2509]
Length = 632
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 136/324 (41%), Positives = 207/324 (63%), Gaps = 12/324 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDA 65
+ G + V+GPG+DIDTL V P++ T ++ +F +L EM +T+L PVP+A
Sbjct: 86 IFTYGSFRLGVYGPGSDIDTLVVVPKYVTVKQ-YFDIFPNLLVEMAPPGAITDLTPVPEA 144
Query: 66 HVPVMKFKFSGVSIDLLYARL-SLWVIPEDLD--ISQDSILQNADEQTVRSLNGCRVTDQ 122
VP++KF++SG+SIDL++ + SL +P+D D ++ +++L+ E VRSLNG RVTD+
Sbjct: 145 FVPIIKFEYSGISIDLIFCSIQSLRQLPDDKDWNLNSNNLLRGLSENEVRSLNGTRVTDE 204
Query: 123 ILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLV 182
IL LVP+ + F+ LR ++ WA+RR +Y+N+ G+ GG+ WA+LVAR+CQLYP A +++V
Sbjct: 205 ILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGVAWAMLVARVCQLYPKATSAVIV 264
Query: 183 SRFFRVYTQWRWPNPVLLCAIE--EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY 240
+FF + W WP PVLL IE + + VW+P+ P D+ H MPIITP+YP M +++
Sbjct: 265 RKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRNHKMPIITPSYPSMCATH 324
Query: 241 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENA 299
NV S++ ++ E +RG +I E + + W LFE TFF +K YL + S
Sbjct: 325 NVGRSSMAVIQQELERGVQISEEIMLGKR--PWKDLFEKHTFFTNGFKFYLTVISSGRTK 382
Query: 300 DDLRNWKGWVESRLRQLTLKIERH 323
+ W G+VESR+R L K+E H
Sbjct: 383 EAQNTWSGFVESRVRVLVQKLELH 406
>gi|348529712|ref|XP_003452357.1| PREDICTED: poly(A) polymerase gamma-like [Oreochromis niloticus]
Length = 763
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 161/412 (39%), Positives = 226/412 (54%), Gaps = 70/412 (16%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + E+ +L V DA VP
Sbjct: 95 IFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFQSFFEKLKQHEEIKDLRAVEDAFVP 153
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+KFKF G+ IDLL+ARL+L IP++LD+ DSIL+N D + +RSLNGCRVTD+IL LVP
Sbjct: 154 VIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSILRNLDIRCIRSLNGCRVTDEILYLVP 213
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNAV + LV +FF V
Sbjct: 214 NKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLV 273
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA-YPCMNSSYNVSTSTL 247
+++W WPNPVLL E+ +L L VWDPR + ITP Y M Y V T++
Sbjct: 274 FSKWEWPNPVLLKQPEDSNLNLPVWDPRVS----------ITPVFYLLMVLHYIVLTAS- 322
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
+ E+N ++W L
Sbjct: 323 --------------ASTEENH--LEWIGL------------------------------- 335
Query: 308 WVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEG 363
VES++R L +ER+ Y + +P PG ++++ + S +F+G+ K+ V E
Sbjct: 336 -VESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRNENDFVSMWFIGIIFKK-VENAES 393
Query: 364 EQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 411
D+ ++ F V + + K GM+I HV ++ L ++ P V+
Sbjct: 394 VNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHQYLPPEVVQ 445
>gi|301095250|ref|XP_002896726.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
gi|262108787|gb|EEY66839.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
Length = 343
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 141/323 (43%), Positives = 202/323 (62%), Gaps = 20/323 (6%)
Query: 100 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 159
D +L+ DE +VRS NG RVT++IL+LVP + FRTTL ++ WA+ RG+YSNV GFLGG
Sbjct: 4 DQVLRGMDEASVRSCNGVRVTERILQLVPNQERFRTTLIAVKHWARIRGIYSNVLGFLGG 63
Query: 160 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-SLGLQVWDPRRN 218
+NWA+LVARICQ YPN++P+ L+SRFFR+Y W WPNP++L ++ +LG W+P+ N
Sbjct: 64 VNWAILVARICQFYPNSLPASLLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPKIN 123
Query: 219 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 278
+D+ HLMPIITPAYP +NSSYNV STL ++ EF RG + +E W LF
Sbjct: 124 VRDRSHLMPIITPAYPALNSSYNVMASTLCVLKTEFDRGLD--RTLEIETKKFSWAKLFV 181
Query: 279 PFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG--D 336
FF+ K++LR++I+A +A D W GWVESRLR L L++E + ++ HP D
Sbjct: 182 APAFFQRSKHFLRVEITARSAQDFDGWFGWVESRLRHLFLRLE--ALSDIRIHPFARFFD 239
Query: 337 FSDK--SKP-------LYCSY-FMGLQ--RKQGVPV-GEGEQFDIRLTVKEFKQAVSMYT 383
F D ++P ++ S+ F+GL+ + PV G D+ +++F +
Sbjct: 240 FIDTKDTRPESSSKCEVHTSWLFIGLKFPAPKAAPVTGATHSVDLTSVIRDFATYTDQWE 299
Query: 384 LRKPGMQISVAHVTRRNLPNFVF 406
R GM + + HVTR +P +V
Sbjct: 300 GRHGGMDMQIDHVTRSQIPEWVL 322
>gi|452986896|gb|EME86652.1| hypothetical protein MYCFIDRAFT_49534 [Pseudocercospora fijiensis
CIRAD86]
Length = 612
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 136/314 (43%), Positives = 200/314 (63%), Gaps = 7/314 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQML--TEMPE-VTELHPVPDAHVPV 69
G + V+GPG+DID+L V P+H +R+ DFF + M+ T PE +TE+ V A VP+
Sbjct: 90 GSYRLGVYGPGSDIDSLMVAPKHVSRD-DFFERMPGMIRATFKPEEITEMVVVAAAAVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K K GV IDL++A L IP +LD+ ++L+ D+ ++ +NG RVTD+IL LVP+
Sbjct: 149 IKTKLMGVDIDLIFANLQRDSIPTNLDLGDTNLLRGLDDTDLKCVNGTRVTDRILTLVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA++R VY +A + GG+ + ++VAR+CQLYPNA +V +FF +
Sbjct: 209 TRIFRIALRAVKLWAQKRAVYGAIACYPGGVAYGMIVARVCQLYPNAAAPKIVQKFFWLL 268
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
W WP+P+ L A E+G LG WDP NP DK HLMP+ITPAYPCMNS++ ++ ST+ +
Sbjct: 269 HTWAWPSPIYLQAREKGPLGKTEWDPTTNPGDKRHLMPVITPAYPCMNSTHTITPSTMAV 328
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGW 308
+ E RG +I E E W LF TFF +AY++Y+ I +A D + W G
Sbjct: 329 LKKESDRGEKIMN--EIYEGKRPWKDLFAKHTFFSDAYQHYICIITAARTKDAQQAWSGL 386
Query: 309 VESRLRQLTLKIER 322
V+SR+++L IE+
Sbjct: 387 VQSRVKRLLAGIEQ 400
>gi|348680417|gb|EGZ20233.1| hypothetical protein PHYSODRAFT_442904 [Phytophthora sojae]
Length = 343
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 145/334 (43%), Positives = 201/334 (60%), Gaps = 20/334 (5%)
Query: 100 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 159
D L+ DE +VRS NG RVT++IL+LVP + FRTTL ++ WA+ RG+YSNV GFLGG
Sbjct: 4 DRYLRGLDESSVRSCNGVRVTERILQLVPNQERFRTTLIAVKHWARVRGIYSNVLGFLGG 63
Query: 160 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-SLGLQVWDPRRN 218
+NWA+LVARICQ YPN++P+ L+SRFFR+Y W WPNP++L ++ +LG W+P+ N
Sbjct: 64 VNWAILVARICQFYPNSLPASLLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPKIN 123
Query: 219 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 278
+D+ HLMPIITPAYP +NSSYNV STL I+ EF +G +E ++ W LF
Sbjct: 124 VRDRSHLMPIITPAYPALNSSYNVMASTLHILKAEFGKGFNRTLEIETKKS--SWAKLFI 181
Query: 279 PFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF- 337
FF+ K++LR+ I+A NA+D W GWVESRLR L L++E L+ HP F
Sbjct: 182 APVFFQRSKHFLRVQITANNAEDFDGWFGWVESRLRHLFLRLE--ALPELRIHPFARFFD 239
Query: 338 ----------SDKSKPLYCSY-FMGLQRKQGVPVGE-GEQFDIRLT--VKEFKQAVSMYT 383
+ ++ S+ F+GL PV G D+ LT +++F +
Sbjct: 240 FGETKGATPEGSSKREVHTSWLFIGLGFPAPNPVAATGGTHDVDLTSVIRDFAFYTDQWE 299
Query: 384 LRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 417
R GM + + HVTR +P +V V + SK
Sbjct: 300 ARHGGMDMQIDHVTRSQIPEWVLESVVNGASDSK 333
>gi|340959697|gb|EGS20878.1| poly(A) polymerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 675
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 202/320 (63%), Gaps = 12/320 (3%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL V P++ T E+ +F Q+L EM + +L PVP+A VP+
Sbjct: 89 GSYRLGVYGPGSDIDTLVVAPKYVTVEQ-YFRIFPQVLVEMAPPGAIKDLTPVPEAFVPI 147
Query: 70 MKFKFSGVSIDLLYARL-SLWVIPEDLD--ISQDSILQNADEQTVRSLNGCRVTDQILRL 126
+KF+F G+SIDL++ + +L +P D + ++ +++L+ E VRSLNG RVTD+IL L
Sbjct: 148 IKFEFDGISIDLIFCSIQTLMQLPADPNWSLADNNLLRGLSENEVRSLNGTRVTDEILNL 207
Query: 127 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 186
VP+ F+ LR ++ WA+R+ +Y+N+ GF GG+ WA+LVAR+CQLYP A +++V++FF
Sbjct: 208 VPEPATFKLALRAIKLWAQRKAIYANIMGFPGGVAWAMLVARVCQLYPKATSAVIVNKFF 267
Query: 187 RVYTQWRWPNPVLLCAIEEGS--LGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 244
+ +W WP PVLL IE G + VW+P+ D+ H MPIITPAYP M +++NV
Sbjct: 268 HIMVKWPWPLPVLLKDIEYGCPVTRVAVWNPKLYASDRNHKMPIITPAYPSMCATHNVGN 327
Query: 245 STLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLR 303
ST+ ++ E ++G +I + + W LF TFF +K YL + S+
Sbjct: 328 STMAVIQQELEKGAQITDEIMVGRR--PWKDLFTKHTFFTNGFKYYLTVISSSRTKQAQN 385
Query: 304 NWKGWVESRLRQLTLKIERH 323
W G++ESR+R L K+E H
Sbjct: 386 AWSGFIESRVRLLVNKLEMH 405
>gi|396488901|ref|XP_003842971.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
gi|312219549|emb|CBX99492.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
Length = 577
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 137/331 (41%), Positives = 202/331 (61%), Gaps = 8/331 (2%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVP 68
G VHGP +DID+L V P+ + + DFF + EM ++TEL+PV DA VP
Sbjct: 89 FGSYALGVHGPTSDIDSLVVVPKQVSID-DFFRNFPSIFREMSKSEDITELNPVEDAFVP 147
Query: 69 VMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
++K ++ GVS+DL++A L L +P D++ + L EQ +RS+NG RVT ++L V
Sbjct: 148 IIKMEYRGVSLDLIFASLPKLSSVPRDMETIEKKNLDGLAEQAMRSVNGTRVTKELLAAV 207
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P +FR LR ++ W+ RG+Y V G+ GG+ WA++VARICQLYP A + +VS+FF
Sbjct: 208 PHPGSFRHALRAIKLWSNERGIYGAVFGYPGGVAWAIMVARICQLYPFANGATIVSKFFS 267
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
+ +W WP PVLL IEEG++GL+VW+P+ D+ HLMPIITPA+P M S++ V STL
Sbjct: 268 LMQKWSWPRPVLLKHIEEGAMGLRVWNPQIYHGDRSHLMPIITPAFPSMCSTHTVMPSTL 327
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWK 306
RIM +EFQR +I + + WD LFE +FF + +K YL I ++ + +
Sbjct: 328 RIMQEEFQRADQIMQHIFAGTK--TWDALFERHSFFTKDHKYYLTIVAASRTQEAHERFN 385
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHPHPGDF 337
G V+S++R + I+ + P+P F
Sbjct: 386 GLVQSKVRHIVKGIDDGQTGIDTARPYPKCF 416
>gi|452845518|gb|EME47451.1| hypothetical protein DOTSEDRAFT_69399 [Dothistroma septosporum
NZE10]
Length = 610
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/314 (42%), Positives = 196/314 (62%), Gaps = 8/314 (2%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQML---TEMPEVTELHPVPDAHVPV 69
G + V GPG+DID L + PRH TRE DFF + M+ T ++TEL PV A+VP+
Sbjct: 89 GSYRLKVFGPGSDIDALMIAPRHVTRE-DFFKYMPDMIRQSTPTEQLTELVPVEAANVPI 147
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + GV++DL+++ L + +P+DL + ++L+ E +R +NG RVTD++L+LVP+
Sbjct: 148 IKTEIDGVAVDLIFSTLHMASVPKDLQLKDSNLLRGLSETDLRCVNGTRVTDRLLQLVPE 207
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA RRGVY NV GF GG+ +A++V R+CQLYP A ++V++FF V
Sbjct: 208 TKTFRLALRAIKLWASRRGVYGNVYGFPGGVGYAMMVVRMCQLYPRAAAPVIVNKFFMVM 267
Query: 190 TQWRWPNPVLLCAIEEG-SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+WRWP+PV LC E LG V NP +K MPIITP +PCMN++ ++ S L
Sbjct: 268 GKWRWPDPVTLCKREPAPDLGHYVAQWPENPWEKADKMPIITPVFPCMNATGGLTASNLE 327
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKG 307
+++ EFQR +I + + +W LF TFF E YK+YL + + + + W G
Sbjct: 328 VILREFQRALKITNDIHNGKQ--EWQALFARQTFFTEDYKHYLCLVTGSRTKEAQQAWSG 385
Query: 308 WVESRLRQLTLKIE 321
+V SRLR+L IE
Sbjct: 386 FVSSRLRKLVSSIE 399
>gi|367027594|ref|XP_003663081.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
gi|347010350|gb|AEO57836.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
Length = 654
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 131/320 (40%), Positives = 207/320 (64%), Gaps = 12/320 (3%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+D+DTL V P++ T E+ +F ++L EM +T+L PVP+A VP+
Sbjct: 88 GSYRLGVYGPGSDMDTLVVAPKYVTVEQ-YFRIFPEVLVEMAPPGAITDLTPVPEAFVPI 146
Query: 70 MKFKFSGVSIDLLYARL-SLWVIPEDLD--ISQDSILQNADEQTVRSLNGCRVTDQILRL 126
+KF+FSG+SIDL++ + +L +P D + ++ +++L+ E VRSLNG RVTD IL L
Sbjct: 147 IKFEFSGISIDLIFCSIQTLKQLPADKNWSLADNNLLRGLSENEVRSLNGTRVTDDILNL 206
Query: 127 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 186
VP+ F+ LR ++ WA+R+ +Y+N+ G+ GG+ WA+LVAR+CQLYP A +++V++FF
Sbjct: 207 VPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWAMLVARVCQLYPKATSAVIVNKFF 266
Query: 187 RVYTQWRWPNPVLLCAIEEGS--LGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 244
+ +W WP PVLL IE G + VW+P+ D+ H MPIITP+YP M +++NV
Sbjct: 267 HIMLKWPWPLPVLLKDIEYGCPVTRVAVWNPKIYASDRNHRMPIITPSYPSMCATHNVGR 326
Query: 245 STLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLR 303
S++ ++ DE ++G ++ E + + + W LF TFF + ++ YL + S+
Sbjct: 327 SSMAVIKDELEKGVQVTEDIMRGKR--PWKDLFTKHTFFTSGFRYYLTVISSSRTKKAQN 384
Query: 304 NWKGWVESRLRQLTLKIERH 323
W G+VESR+R L K+E H
Sbjct: 385 VWSGFVESRVRLLVNKLEMH 404
>gi|327262763|ref|XP_003216193.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Anolis carolinensis]
Length = 678
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 150/382 (39%), Positives = 229/382 (59%), Gaps = 17/382 (4%)
Query: 45 ELHQMLTE-MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 103
+L+ ++ E + EV + V DA+VPV+KF+F G+ IDL++ARL+L I ++LD+ DS L
Sbjct: 90 KLNNLVKEWIAEVGKNKAVEDAYVPVIKFEFDGIEIDLVFARLALPTISDNLDLRDDSSL 149
Query: 104 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGF--LGGIN 161
++ D + +RSLNG RVTD+IL LVP +NFR TLR ++ WAKR+ + + + + L I+
Sbjct: 150 KSLDIRCIRSLNGFRVTDEILHLVPNKENFRLTLRAIKLWAKRKYLINLILCYQPLCLIS 209
Query: 162 WALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKD 221
WA+L C++Y N S V+R + ++ WPNPVLL EE +L L VWDPR NP D
Sbjct: 210 WAVLSXITCKIYQNGRGSFSVNRCYSSFSFREWPNPVLLKEPEESNLNLPVWDPRVNPSD 269
Query: 222 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 281
+YHLMPIITPAYP NS+YNVSTST IM++EF+ G + + + + ++ DW L EP
Sbjct: 270 RYHLMPIITPAYPQQNSTYNVSTSTRAIMVEEFKHGLVVADEIFQGKS--DWPKLLEPPN 327
Query: 282 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDK 340
FF+ YK+Y+ + S+ + W G VES++R L +ER+ + L H +P F ++
Sbjct: 328 FFQKYKHYIVLTASSSTEEHHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNR 386
Query: 341 SKPLYCSY----FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQIS 392
++P Y F+G+ K+ E D+ ++ F V + + K GM+I
Sbjct: 387 TQPKESDYVSLWFLGIIFKKA-ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIE 445
Query: 393 VAHVTRRNLPNFVFPGGVRPSR 414
HV ++ L ++ P + R
Sbjct: 446 ATHVKKKQL-HYYLPADLLQKR 466
>gi|224001714|ref|XP_002290529.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973951|gb|EED92281.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 367
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 140/320 (43%), Positives = 191/320 (59%), Gaps = 17/320 (5%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + VH PGADIDT+ V P TRE DFF L + + P+VT PV +A VP++ F
Sbjct: 50 GSYRLGVHEPGADIDTIAVAPNICTRE-DFFDSLAERIRRHPDVTNFVPVENAAVPILTF 108
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP---- 128
+ G++IDLL+ARL+ +P D DI D +L D T +SLNG RVT+ I LV
Sbjct: 109 DWEGINIDLLFARLNASSVPRDFDIDNDLVLSGVDSATEKSLNGPRVTNLIAALVSGTDE 168
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ Q F T +R +R WAK RG+YSN G+ GG+N + VA + QLYPNA P+ L+ +FF V
Sbjct: 169 RYQTFLTVVRLVRKWAKARGLYSNKMGYWGGVNINIAVALVLQLYPNACPASLLRKFFLV 228
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+ WRWPNPV+L + LGL VW+ + + + P++TPAYP MNS+ +VS TL+
Sbjct: 229 FKSWRWPNPVMLTKPHDAELGLPVWNSFQ-AANMRQVAPMVTPAYPAMNSTLSVSRQTLQ 287
Query: 249 IMMDEFQRGHEICEAM----EKNEADVD-------WDTLFEPFTFFEAYKNYLRIDISAE 297
I+ +EF RGH + + + +K D D W LFEP FF Y YL + I
Sbjct: 288 ILHEEFCRGHNVVDKLYKDFQKGALDKDKIESGDIWKELFEPSDFFIGYPYYLSLCIVGP 347
Query: 298 NADDLRNWKGWVESRLRQLT 317
+ D + W G+VESRLR+L
Sbjct: 348 SQADAQAWAGFVESRLRKLV 367
>gi|367050218|ref|XP_003655488.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
gi|347002752|gb|AEO69152.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
Length = 652
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 132/320 (41%), Positives = 203/320 (63%), Gaps = 12/320 (3%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+D+DTL V P++ T E+ +F ++L EM +T+L PVP+A VP+
Sbjct: 88 GSYRLGVYGPGSDMDTLVVAPKYVTVEQ-YFRIFPEVLVEMAPPAAITDLTPVPEAFVPI 146
Query: 70 MKFKFSGVSIDLLYARL-SLWVIPED--LDISQDSILQNADEQTVRSLNGCRVTDQILRL 126
+KF+FSG+SIDL++ + +L +P D ++ +++L+ E VRSLNG RVTD+IL L
Sbjct: 147 IKFEFSGISIDLIFCSIQTLIQLPADKSWSLADNNLLRGLSENAVRSLNGTRVTDEILHL 206
Query: 127 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 186
VP+ F+ LR ++ WA+R+ +Y+N+ G+ GG+ WA+LVAR+CQLYP A +++V++FF
Sbjct: 207 VPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWAMLVARVCQLYPKATSAVIVNKFF 266
Query: 187 RVYTQWRWPNPVLLCAIEEGS--LGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 244
+ +W WP PVLL IE + VW+P+ D+ H MPIITPAYP M +++NV
Sbjct: 267 NIMLKWPWPLPVLLKDIEYNGPVTRVPVWNPKLYASDRNHKMPIITPAYPSMCATHNVGR 326
Query: 245 STLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLR 303
S++ ++ E ++G E+ E + W LF TFF + +K YL + S+
Sbjct: 327 SSMVVIQQELKKGAEVTEEIMLGRR--PWKDLFTKHTFFTSGFKYYLTVISSSRTKKAQN 384
Query: 304 NWKGWVESRLRQLTLKIERH 323
W G++ESR+R L KIE H
Sbjct: 385 VWSGFIESRVRLLVNKIEMH 404
>gi|336268304|ref|XP_003348917.1| hypothetical protein SMAC_01938 [Sordaria macrospora k-hell]
gi|380094176|emb|CCC08393.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 632
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 134/323 (41%), Positives = 207/323 (64%), Gaps = 10/323 (3%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREE--DFFGELHQMLTEMPEVTELHPVPDAH 66
+ G + V+GPG+DIDTL V P++ T ++ D F +L + + +T+L PVP+A
Sbjct: 86 IFTYGSFRLGVYGPGSDIDTLVVVPKYVTVKQYFDIFPKLLEEMAPPGAITDLTPVPEAF 145
Query: 67 VPVMKFKFSGVSIDLLYARL-SLWVIPEDLD--ISQDSILQNADEQTVRSLNGCRVTDQI 123
VP++KF++SG+SIDL++ + SL +P+D + ++ +++L+ E VRSLNG RVTD+I
Sbjct: 146 VPIIKFEYSGISIDLIFCSIQSLRQLPDDKEWNLNNNNLLRGLSENEVRSLNGTRVTDEI 205
Query: 124 LRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVS 183
L LVP+ + F+ LR ++ WA+RR +Y+N+ G+ GG+ WA+LVAR+CQLYP A +++V
Sbjct: 206 LALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGVAWAMLVARVCQLYPKATSAVVVR 265
Query: 184 RFFRVYTQWRWPNPVLLCAIE--EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYN 241
+FF + W WP PVLL IE + + VW+P+ P D+ H MPIITP+YP M +++N
Sbjct: 266 KFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRNHKMPIITPSYPSMCATHN 325
Query: 242 VSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENAD 300
V S++ ++ E +RG +I E + + W LFE TFF +K YL + S +
Sbjct: 326 VGRSSMAVIQQELERGVQIAEEIMLGKR--PWKDLFEKHTFFTNGFKFYLTVISSGRTKE 383
Query: 301 DLRNWKGWVESRLRQLTLKIERH 323
W G+VESR+R L K+E H
Sbjct: 384 AQNTWSGFVESRVRVLVQKLELH 406
>gi|169598326|ref|XP_001792586.1| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
gi|160704377|gb|EAT90176.2| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
Length = 575
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 151/443 (34%), Positives = 240/443 (54%), Gaps = 49/443 (11%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDF--FGELHQMLTEMPEVTELHPVPDAHVPV 69
G VHGP +DIDTL V P+H E+ F F + + L+ +++EL PV DA+VP+
Sbjct: 89 FGSYALGVHGPTSDIDTLIVVPKHVFIEDFFKIFPSIFRELSNAEDISELVPVEDAYVPI 148
Query: 70 MKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+K ++ GVS+DLL+A + ++ +P++L+ S+L++ +E T+RS+NG RV ++L VP
Sbjct: 149 IKMEYRGVSLDLLFASMPTMSSVPKELETVDKSVLRHLEETTIRSVNGTRVVKELLSSVP 208
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ ++FR LR ++ WA RR +Y V G+ GGI WA++VARICQLYP A + ++S+FF +
Sbjct: 209 QRRHFRYALRAVKLWANRRAIYGAVFGYPGGIAWAIMVARICQLYPMACGATILSKFFNL 268
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRN--PKDKYHLMPIITPAYPCMNSSYNVSTST 246
+W+WP PV+L E GL+VW+P P D HLMP+ITPA+P M S++ V+TST
Sbjct: 269 MHKWQWPRPVMLKEHELPEFGLRVWNPAHQSYPPDARHLMPVITPAFPAMCSTHTVTTST 328
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNW 305
+IMM+EFQR +I + + W+ LF +FF + +K YL + ++ + +
Sbjct: 329 KQIMMEEFQRADKIVRDVFNGQG--TWEALFNNHSFFTQDHKYYLSVIAASRTKEADLTF 386
Query: 306 KGWVESRLRQLTLKIERHTYNMLQCHPHPGDF---------------------------- 337
G V+S++R L I+ + P P F
Sbjct: 387 HGLVQSKVRLLVAGIDDGQTGIDMARPFPEGFERVHRCKNEDEVEAVTKGSLDYMIPVSQ 446
Query: 338 -----SDKSKPLYC-SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG-MQ 390
+ + +Y ++++GL+ + E DI F+ ++ L G M
Sbjct: 447 VPAAGTTEDHIIYTMTFYIGLRLPK-----ERSTLDISYITNHFRSKITESKLYDEGTMS 501
Query: 391 ISVAHVTRRNLPNFVF-PGGVRP 412
+ V H LP+ +F PG VRP
Sbjct: 502 VKVVHTRNTALPDDLFKPGEVRP 524
>gi|148686801|gb|EDL18748.1| poly (A) polymerase alpha, isoform CRA_b [Mus musculus]
Length = 540
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 187/298 (62%), Gaps = 19/298 (6%)
Query: 116 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 175
GCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 4 GCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPN 63
Query: 176 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 235
A+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 64 AIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 123
Query: 236 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 295
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ + S
Sbjct: 124 QNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLAS 181
Query: 296 AENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFM 350
A W G VES++R L +E++ + L Q P P + D+ + + +
Sbjct: 182 APTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTMWVI 240
Query: 351 GLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 401
GL K+ E D+ ++ F +QA++ M+ L M+I+ HV R+ L
Sbjct: 241 GLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQL 294
>gi|224099105|ref|XP_002311376.1| predicted protein [Populus trichocarpa]
gi|222851196|gb|EEE88743.1| predicted protein [Populus trichocarpa]
Length = 483
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/350 (41%), Positives = 205/350 (58%), Gaps = 23/350 (6%)
Query: 11 GLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVM 70
GLG+ H P +DID LCVGP AT EDFF LH +L PE++E+H V D+ VP+M
Sbjct: 59 GLGF-----HDPESDIDALCVGPFFATIAEDFFIVLHNILKSRPEISEIHCVKDSKVPLM 113
Query: 71 KFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKI 130
+F F G+S+DL YA+L + +PE++DI S+L N DE + +SL+G R +IL LVP +
Sbjct: 114 RFTFDGISVDLPYAQLKVLNVPENVDILNLSLLTNIDETSWKSLSGVRANQRILLLVPNL 173
Query: 131 QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYT 190
NF++ LRC++ WAKRRGVY N+ GFLGG++ A+L A +CQ PNA L+S FF Y
Sbjct: 174 MNFQSMLRCLKLWAKRRGVYGNLNGFLGGVHLAVLAAFVCQNQPNASVIALISNFFSTYA 233
Query: 191 QWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIM 250
W WP PV+L + + V D + MPI P P NV+ ST +
Sbjct: 234 MWPWPTPVML----QDGMSSNVED----VIETRFYMPIRLPCSPYEYCHSNVTKSTFTKI 285
Query: 251 MDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVE 310
EF RGH + + K + D D +FEPF + Y +++I +SA + D+L +W GWV+
Sbjct: 286 RAEFLRGHSMTRDLLKLKLDSDVGRIFEPFPYSTNYTRFVKIYLSAPDQDELGDWVGWVK 345
Query: 311 SRLRQLTLKIERHTYNMLQ--CHPHPGDFS--DKSKPLYCSYFMGLQRKQ 356
S R L LK+E +Q C P+P ++ D S+P ++ GL R +
Sbjct: 346 SHFRCLLLKLE-----AVQGFCDPNPMEYVDMDASEP-NVVFYWGLNRSR 389
>gi|325191928|emb|CCA26398.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 664
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 217/399 (54%), Gaps = 18/399 (4%)
Query: 24 ADIDTLCVGPRHATREEDFFGELHQMLTEMP--EVTELHPVPDAHVPVMKFKFSGVSIDL 81
+D+D + P T + F +L+ L+ +P ++T+L + A VP++ FK +GV ID
Sbjct: 239 SDLDIVAFAPNFVTLD-CFLTDLYVYLSNLPNSKITKLVAMKKATVPILAFKLNGVHIDF 297
Query: 82 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 141
L AR + +P L I D IL D ++RS++ RV+ +L LVPK FR+ +R +R
Sbjct: 298 LLARSTELKVPTHLPICCDEILSGMDSISIRSMSIARVSSLVLELVPKGCAFRSFVRIIR 357
Query: 142 FWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLC 201
WAKRRG+YSN GFLGGI+W LL ICQ+ P A S+L+ RFF V+++W WP PV +
Sbjct: 358 LWAKRRGIYSNKTGFLGGISWTLLAVFICQMLPEASLSVLLHRFFLVFSKWTWPTPVWIA 417
Query: 202 AIEEGSL---GLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 258
G+ G+Q W P+ N D+ HLMPIITP YP +NS+ NV+ +TLRIM +EFQRG
Sbjct: 418 RPYLGNAEADGVQ-WCPQTNHHDRAHLMPIITPGYPSVNSAVNVNRATLRIMQEEFQRGR 476
Query: 259 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 318
I E + + A +W LF P F Y NYL + + A N +DL W ++ SRLR+L
Sbjct: 477 YIVEEITEKYAFGNWQNLFTPSEFLVRYDNYLVMRVQALNEEDLDQWSNYIASRLRKLVE 536
Query: 319 KIERHTYNMLQCHPHPGDFSDKSKPLYCS---YFMGLQ---RKQGVP----VGEGEQFDI 368
+E + HP+P P + Y +G + RK+G E + +
Sbjct: 537 SLEV-AIPIRSVHPYPVLMPGTQDPGVNASGYYLLGFEVENRKRGCKSNTLCEEAKACTV 595
Query: 369 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 407
V T RKPGM+I + + LP V P
Sbjct: 596 SAMRYFIATEVDQCTERKPGMKIDLQYANWNALPLCVLP 634
>gi|384485221|gb|EIE77401.1| hypothetical protein RO3G_02105 [Rhizopus delemar RA 99-880]
Length = 472
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 133/248 (53%), Positives = 176/248 (70%), Gaps = 10/248 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHG GADIDTLCV P+H TRE FF + ML E+PEVTEL V +A+VP
Sbjct: 77 IFTFGSYQLGVHGAGADIDTLCVFPQHVTREH-FFSIMFNMLNELPEVTELTSVVEAYVP 135
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V++ FSG+ ID + ARL L IPEDLD+S DS+L +E+ VRS++G RVT++ILRLVP
Sbjct: 136 VIRMHFSGIPIDFVCARLLLPSIPEDLDLSDDSLLVGLEEKCVRSVSGPRVTNEILRLVP 195
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FR +LR ++ WAK+RG+YSNV GFLGG+ WA+LVAR+CQ+YPNA + +VSRFF +
Sbjct: 196 SVSVFRESLRTIKLWAKKRGIYSNVMGFLGGVAWAMLVARVCQMYPNACTASIVSRFFHI 255
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++W WP PVLL +EEG + P DK H MPIITP +P M +++NV+ ST
Sbjct: 256 MSKWEWPQPVLLKPMEEGPI---------YPADKAHRMPIITPGFPSMCATHNVTNSTRS 306
Query: 249 IMMDEFQR 256
IMM+EF +
Sbjct: 307 IMMNEFLK 314
>gi|240274559|gb|EER38075.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus H143]
Length = 493
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/261 (47%), Positives = 175/261 (67%), Gaps = 4/261 (1%)
Query: 78 SIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 137
SIDL+YARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL LVP+ + FR L
Sbjct: 50 SIDLIYARLLVHSVPLNLDLRNKDLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLAL 109
Query: 138 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP 197
R ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S +V +FFR+ QW+WP P
Sbjct: 110 RAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQP 169
Query: 198 VLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 257
VLL IEEG L ++VW+P+ DKYHLMPIITPAYP M +++NVS ST +++ E +RG
Sbjct: 170 VLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRG 229
Query: 258 HEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQL 316
+I + + + + W+ LF TFF + YK YL I ++ + D W G VES+LR L
Sbjct: 230 GDIADKIFVGQ--LSWNDLFTRHTFFSQDYKYYLNITSASRSKDAQSVWSGLVESKLRHL 287
Query: 317 TLKIERHTYNMLQCHPHPGDF 337
++R + ++ HP P F
Sbjct: 288 VGALDRKS-SIEIAHPFPKGF 307
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 65/143 (45%), Gaps = 22/143 (15%)
Query: 333 HPGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ- 390
HP D LY + Y++GL+ K VP G DI FK + + +PG+
Sbjct: 365 HPN--GDNGCTLYTTTYYIGLELKPLVP-GASRSLDISADTHIFKSTCTSWAQYQPGIND 421
Query: 391 ISVAHVTRRNLPNFVF-PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD 449
+++ HV +LP VF PG VRPSRP K KV ++P A ++ D
Sbjct: 422 LNITHVRNYDLPEDVFQPGEVRPSRPKK-----------KVVKKSEPTAQ--KRNIHALD 468
Query: 450 NVDTHLRNAKCHAT---MPSSSG 469
N AK HA+ MPS++
Sbjct: 469 NEAPSENPAKRHASPNGMPSAAA 491
>gi|378756776|gb|EHY66800.1| poly(A) polymerase [Nematocida sp. 1 ERTm2]
Length = 507
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 124/315 (39%), Positives = 195/315 (61%), Gaps = 3/315 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADIDTLCV P +R E FF + L +TE+ V + VP
Sbjct: 69 IFTFGSYRLGVHSSGADIDTLCVVPNFVSRNE-FFTVFYDELCSKSYITEISKVTNTFVP 127
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++KFK + IDL++AR+ L IP ++D+ + +L++ E+ + SLNG RVTD+IL VP
Sbjct: 128 LIKFKIKSIPIDLVFARMDLPSIPPNIDLLNNKLLKHMSEKCILSLNGNRVTDEILAQVP 187
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I+ F TLR M++WA++R VY + G++GG+ +AL VA++CQ+YP+A + +FF V
Sbjct: 188 NIETFHKTLRFMKYWAQKRQVYGHAYGYMGGVAYALCVAKVCQMYPSADAFKTIEKFFEV 247
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WP PV++ + + + L+VW+P+ N K MP+ITP YP + S++N++TSTL
Sbjct: 248 FSKWAWPQPVIIKEVPDCNYNLKVWNPKVNVHHKNDKMPVITPVYPPLCSTHNITTSTLF 307
Query: 249 IMMDEFQRGHEI-CEAME-KNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
+M EFQRG I E+++ K E D L E FF +K Y I ++ +N+ + +
Sbjct: 308 VMKREFQRGTAIFAESLQNKTEPFKVLDELCEDTDFFTRHKTYFMIAMACDNSKEFGRFM 367
Query: 307 GWVESRLRQLTLKIE 321
G+ E+R+R K+E
Sbjct: 368 GFAETRVRMFAQKLE 382
>gi|189208746|ref|XP_001940706.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187976799|gb|EDU43425.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 579
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 153/445 (34%), Positives = 229/445 (51%), Gaps = 51/445 (11%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM---PEVTELHPVPDA 65
+ G VHGP +DIDTL V P+ + + DFF E+ ++ E PV DA
Sbjct: 88 IFTFGSFALGVHGPKSDIDTLVVAPKFVSID-DFFAIFPSTFKELCNEKDIQEFVPVEDA 146
Query: 66 HVPVMKFKFSGVSIDLLYARLSLW-VIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 124
VP++K ++ GVSIDLL+ L IP ++ + L+ E RS+NG RVT+++L
Sbjct: 147 FVPIIKMEYQGVSIDLLFCSLPKRPSIPLNMTTIEKKDLEGLSESATRSVNGTRVTNELL 206
Query: 125 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSR 184
VP+ +FR LR ++ W+ RRG+Y V G+ GG+ WA++VARICQLYP A + +VS+
Sbjct: 207 DSVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAIMVARICQLYPMANGATIVSK 266
Query: 185 FFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 244
FF + +W WP PV+L IEEG +GL+VW+P+ D+ HLMPIITPA+P M +++ V
Sbjct: 267 FFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDRAHLMPIITPAFPSMCATHTVMP 326
Query: 245 STLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLR 303
STLRIM +EF R I + + N+ DW LFE TFF + +K YL + ++ +
Sbjct: 327 STLRIMKEEFGRADSILQDIFANKK--DWKALFERHTFFTKDHKYYLSVVAASRTKEANS 384
Query: 304 NWKGWVESRLRQLTLKIERHTYNMLQCHPH---------------------------PGD 336
+ G V+S++R + I+ + P+ P
Sbjct: 385 TFSGLVQSKIRHIIKGIDDGNTGIATARPYIEYFERAHRITDDQFKEVAQGSLDYLIPKS 444
Query: 337 FSDKSKPL----------YCSYFMGLQRKQGVPVGEG-EQFDIRLTVKEFKQAVSMYTLR 385
+D L ++++GL +P GE + DI V +FK ++ L
Sbjct: 445 EADAEGTLEANGDTTIVHTTTFYIGLT----LPTGEATKSLDISYPVSQFKSYITDSDLY 500
Query: 386 KPG-MQISVAHVTRRNLPNFVFPGG 409
M + V H LP+ VF G
Sbjct: 501 NEDLMSVKVVHTRSSALPDDVFVEG 525
>gi|9453844|dbj|BAB03278.1| poly A polymerase [Drosophila melanogaster]
Length = 459
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 134/328 (40%), Positives = 192/328 (58%), Gaps = 40/328 (12%)
Query: 107 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 166
D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LV
Sbjct: 2 DHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLV 61
Query: 167 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 226
AR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH M
Sbjct: 62 ARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHPM 121
Query: 227 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 286
PIITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF Y
Sbjct: 122 PIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFYRY 179
Query: 287 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK------ 340
++++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 180 RHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQSAN 238
Query: 341 -----------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ 377
S P +F+GL+ ++ E D+ +++ F +
Sbjct: 239 NSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTE 294
Query: 378 AVSMY----TLRKPGMQISVAHVTRRNL 401
V M+ + K GM I HV R+ L
Sbjct: 295 HVMMHGVNIKMLKEGMTIDARHVKRKQL 322
>gi|295664146|ref|XP_002792625.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278739|gb|EEH34305.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 590
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/329 (40%), Positives = 195/329 (59%), Gaps = 41/329 (12%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+DIDTL VGP+H + E DFF + +L +M + +L PVPDA VP+
Sbjct: 90 GSYRLGVYGPGSDIDTLVVGPKHVSFE-DFFSDFPPLLEQMAPKGAIEKLTPVPDAFVPI 148
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+K + SG+SIDL+YARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL LVP+
Sbjct: 149 IKIELSGISIDLIYARLLVHSVPLNLDLKNKDLLRGLDEKEIRCVNGTRVTDEILELVPQ 208
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR
Sbjct: 209 QKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVAR--------------------- 247
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
IEEG L ++VW+P+ D+YHLMPIITPAYP M +++NVS ST +
Sbjct: 248 ------------PIEEGPLQMKVWNPKIYHGDRYHLMPIITPAYPSMCATHNVSLSTKAV 295
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGW 308
++ E +RG +I + + + + W+ LF TFF + YK YL I S+ + W G
Sbjct: 296 LLRELKRGGDIVDKIFLGQ--LTWNDLFTRHTFFSQDYKYYLSITSSSRGKEAQSVWSGL 353
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDF 337
VES+LR L ++R + ++ HP P F
Sbjct: 354 VESKLRHLVGALDRKS-SIEVAHPFPKGF 381
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 346 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNF 404
+Y++GL+ K P G DI + FK + + +PG+ + + HV +LP
Sbjct: 451 TTYYIGLELKPLAP-GAARSLDISTDTQIFKSTCTSWPQYQPGINDLHITHVRNYDLPED 509
Query: 405 VFPGG-VRPSRPSKGTWDSRRALERKVSSHT 434
VF G VRPSRP K T +K S H+
Sbjct: 510 VFQSGEVRPSRPKKKTLKKTEPTAQKRSIHS 540
>gi|330915746|ref|XP_003297151.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
gi|311330327|gb|EFQ94750.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
Length = 566
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 130/329 (39%), Positives = 195/329 (59%), Gaps = 6/329 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDF--FGELHQMLTEMPEVTELHPVPDAH 66
+ G VHGP +DIDTL V P+ + ++ F F + L + ++ E PV DA
Sbjct: 88 IFTFGSFALGVHGPSSDIDTLVVAPKFVSIDDFFALFPPTFRELCDEKDIQEFVPVEDAF 147
Query: 67 VPVMKFKFSGVSIDLLYARLSLW-VIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILR 125
VP++K ++ GVSIDLL+ L IP + L+ E RS+NG RVT+++L
Sbjct: 148 VPIIKMQYQGVSIDLLFCSLPKRPSIPSKMTTIDKKDLEGLSESATRSVNGTRVTNELLD 207
Query: 126 LVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRF 185
VP+ +FR LR ++ W+ RRG+Y V G+ GG+ WA++VARICQLYP A + +VS+F
Sbjct: 208 SVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAIMVARICQLYPMANGATIVSKF 267
Query: 186 FRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
F + +W WP PV+L IEEG +GL+VW+P+ D+ HLMPIITPA+P M +++ V S
Sbjct: 268 FSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDRAHLMPIITPAFPSMCATHTVMPS 327
Query: 246 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRN 304
TLRIM +EF R +I + + N+ DW LFE TFF + +K YL + ++ +
Sbjct: 328 TLRIMKEEFGRADKILQDIFANKK--DWKALFERHTFFTKDHKYYLSVVAASRTKEANST 385
Query: 305 WKGWVESRLRQLTLKIERHTYNMLQCHPH 333
+ G V+S++R + I+ + P+
Sbjct: 386 FSGLVQSKIRHIIKGIDDGNTGIATARPY 414
>gi|294948940|ref|XP_002785971.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900079|gb|EER17767.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 505
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 125/336 (37%), Positives = 200/336 (59%), Gaps = 15/336 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
++ G + V P +DIDTL + P +R++ F + ML P VTE +PVP AHVP
Sbjct: 105 VLTFGSFRLGVITPMSDIDTLVLLPNSISRDDFFTDFVETMLNRSPHVTECNPVPAAHVP 164
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K K+ G+ +D+L A + V+ D+D Q+ ++ + +++ ++S+NG RV D++L LV
Sbjct: 165 IIKVKYRGICMDILAACVPTHVLSGDVDSVQEELIYDVEKRCMKSMNGIRVADKMLSLVV 224
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
Q FR R +++WA++R +YSN G++GG++WA++V R+CQLYPN +V RFF V
Sbjct: 225 DTQTFRLATRVIKYWAQQRLIYSNAIGYMGGVSWAVMVGRVCQLYPNYSAKQIVERFFFV 284
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y +W+W + G+ + + RR D++H+MP+ITP +P N++YNV S R
Sbjct: 285 YARWQW-----TATRDYGNSNVPL---RRYTSDRHHVMPVITPIFPTHNTTYNVQESNKR 336
Query: 249 IMMDEFQRGHEICEAMEKNEA-------DVDWDTLFEPFTFFEAYKNYLRIDISAENADD 301
+++ E +RG EI E M N++ +V W L PF FF+ Y+ +L ++ISAE
Sbjct: 337 VIVREIKRGREIMELMSMNKSSGATKGNEVTWADLCAPFPFFQVYRQFLLLEISAETEKA 396
Query: 302 LRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 337
+KG VESR+R L +E + + PHP F
Sbjct: 397 FLKFKGLVESRIRVLVKNLETCCGHKVLPQPHPVMF 432
>gi|123495483|ref|XP_001326753.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909672|gb|EAY14530.1| hypothetical protein TVAG_388620 [Trichomonas vaginalis G3]
Length = 494
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/407 (35%), Positives = 217/407 (53%), Gaps = 11/407 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L+ G + V G+DID + V P R DFF ++M+ P V EL V +A+ P
Sbjct: 83 LVPYGSYRLGVVSEGSDIDCIVVAPSFVKRS-DFFNTFYEMMINHPSVKELVKVENAYSP 141
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+M F + G+ IDL +A L++ + ED D + D IL N DE++VRSLNG RV D +L+LVP
Sbjct: 142 IMSFHYDGIEIDLSFASLAMTTVAEDTDFADDHILDNVDEESVRSLNGRRVNDMLLQLVP 201
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
FR LR +R WAK+R VY NV G+LGG+N A+L A ICQ YP P+ ++ FF
Sbjct: 202 NQDIFRVVLRFLRIWAKKRCVYGNVFGYLGGVNLAILAAFICQRYPKKSPAYIIVMFFND 261
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
W WP P+ + G+ WDP R +D MPIITPAYP +NS ++ + S+
Sbjct: 262 LATWTWPEPIYINTPTTGNRS--NWDPTRQ-QDHKDCMPIITPAYPTINSLHSATKSSRN 318
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
M EF+RG ++ A K+EA W+ + + FF ++ ++ + + A + +
Sbjct: 319 RMTVEFKRGFKVASACLKSEA--SWERIIDSPKFFVRHRKFVEVLVVATEEKVYTEFMKF 376
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSK--PLYCS-YFMGLQRKQGVPVGEGEQ 365
V+SR+R L + IE ++ + P +F +CS +++GL VP E +
Sbjct: 377 VQSRVRFLAINIETQLRHVSHAYIWPVEFPANGYRGNEFCSVFYIGLSYH--VPKDENQS 434
Query: 366 FDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRP 412
+ LT K + P + + V ++LP+F+FP G RP
Sbjct: 435 RTLDLTSPAKKWVDDIRQKAPPNADVILDVVDTKDLPSFLFPNGERP 481
>gi|387594343|gb|EIJ89367.1| poly(A) polymerase [Nematocida parisii ERTm3]
gi|387596813|gb|EIJ94434.1| poly(A) polymerase [Nematocida parisii ERTm1]
Length = 506
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/393 (34%), Positives = 221/393 (56%), Gaps = 21/393 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADIDTLCV P +R E FF + L +TE+ V + VP
Sbjct: 69 IFTFGSYRLGVHSSGADIDTLCVVPNFVSRNE-FFTTFYDELCSKDYITEISKVTNTFVP 127
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++KFK + IDL++AR+ L I ++D+ + +L++ E+ + SLNG RVTD+IL VP
Sbjct: 128 LIKFKIKTIPIDLVFARVDLPSISPNIDLLNNKLLKHMSEKCILSLNGNRVTDEILAQVP 187
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I F TLR +++WA++R VY + G++GG+ +AL VA++CQLYP A + +FF V
Sbjct: 188 NISTFHKTLRFIKYWAQKRQVYGHSYGYMGGVAYALCVAKVCQLYPGADAFETIEKFFDV 247
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W WP PV++ + + + L+VW+P+ NP+ K MP+ITP YP + S++N++ STL
Sbjct: 248 FSKWPWPQPVIIKEVPDCNYNLKVWNPKINPQHKNDKMPVITPVYPPLCSTHNITNSTLF 307
Query: 249 IMMDEFQRGHEI-CEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 307
+ EF RG I E +K + D L E FF +K Y I ++ +N + + G
Sbjct: 308 VAKKEFLRGVAIFSENADKKDPMKILDQLCEDADFFTRHKTYFMIALACDNPKEFSRFMG 367
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPG-----DFSDKSKPL------------YCSYFM 350
+ E+R+R K+E + N+ + P D + K+ PL + ++F+
Sbjct: 368 FAETRVRMFAQKLE-NIENIEYAYTFPKKYILEDVTSKNVPLLKELKCGDDSYAFGAFFI 426
Query: 351 GLQRKQ-GVPVGEGEQFDIRLTVKEFKQAVSMY 382
G+ +P+ ++ +++ V EFK ++ Y
Sbjct: 427 GIDFSTVKLPLNASKKMNLKKPVLEFKSSLETY 459
>gi|358332465|dbj|GAA51116.1| poly(A) polymerase, partial [Clonorchis sinensis]
Length = 1210
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/251 (49%), Positives = 170/251 (67%), Gaps = 4/251 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+ GAD+D+L V PR TR+E FF E +L+E P V ++H V DA VP
Sbjct: 961 IFTFGSYRLGVNFKGADVDSLLVVPRFITRQE-FFSEFQSVLSENPHVEDIHAVVDAFVP 1019
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS--ILQNADEQTVRSLNGCRVTDQILRL 126
V+K KF GV IDLL+A++ I E+ ++ +++ +++N DE VRS+NG RV + IL L
Sbjct: 1020 VLKLKFMGVEIDLLFAQIDQMNIAENFNLCENTEVLMRNMDEHDVRSINGVRVNEDILNL 1079
Query: 127 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 186
V +F+ L+ +RFWAKRR +YSN GFLGG++WA+LV+RICQLYP A PSMLV FF
Sbjct: 1080 VYNKNSFKVALKVIRFWAKRRNIYSNTLGFLGGVSWAILVSRICQLYPYASPSMLVYLFF 1139
Query: 187 RVYTQWRWPNPVLLCAIEE-GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
++++QW WP PV L E SL L VWDPR N D+YHLMPI+TP+YP NS+YNV S
Sbjct: 1140 KIFSQWPWPKPVRLRESEYIPSLCLPVWDPRLNLMDQYHLMPILTPSYPSQNSAYNVQRS 1199
Query: 246 TLRIMMDEFQR 256
I+ E ++
Sbjct: 1200 NRIILERELKQ 1210
>gi|452002314|gb|EMD94772.1| hypothetical protein COCHEDRAFT_1167952 [Cochliobolus
heterostrophus C5]
Length = 578
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/446 (34%), Positives = 233/446 (52%), Gaps = 49/446 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHAT--REEDFFGELHQMLTEMPEVTELHPVPDAH 66
+ G VHGP +DIDTL V P+ +FF + ++ + ++ E PV DA
Sbjct: 88 IFTFGSYALGVHGPSSDIDTLVVAPKFVAIHEFFEFFPPTFREMSNVDDINEFVPVEDAF 147
Query: 67 VPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILR 125
VP++K ++ VSIDLL+A L IP ++D + L+ E RS+NG RVT+++L
Sbjct: 148 VPIIKMEYREVSIDLLFASLPKRSSIPRNMDTIEKKDLEGLSESATRSVNGTRVTNELLD 207
Query: 126 LVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRF 185
VP+ +FR LR ++ W+ RRG+Y V G+ GG+ WA++VARICQLYP A + +VS+F
Sbjct: 208 AVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAIMVARICQLYPMANGATIVSKF 267
Query: 186 FRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
F + +W WP PV+L IEEG LGL+VW+P+ D+ HLMPIITPA+P M +++ V S
Sbjct: 268 FSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYGGDRAHLMPIITPAFPSMCATHTVMPS 327
Query: 246 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRN 304
TLRIM DEF R +I + + DW+ LFE +FF + +K YL + ++ +
Sbjct: 328 TLRIMKDEFGRADKILQHIFAGTK--DWNALFERHSFFTKDHKYYLSVVAASRTKEANST 385
Query: 305 WKGWVESRLRQLTLKIERHTYNMLQCHPH------------------------------- 333
+ G V+S++R + I+ + P+
Sbjct: 386 FSGLVQSKIRHIVKGIDDGQTGIDTARPYINYFERYHRCKDDQFHEVTQGSLEYMIPASE 445
Query: 334 -PGDFS----DKSKPLY-CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP 387
P D + D + +Y ++++GL +P + DI V +F+ ++ L
Sbjct: 446 VPADGTAPADDDTHIIYTTTFYIGLT----LPPDATKSLDISYPVSQFRSYITDSDLYDE 501
Query: 388 G-MQISVAHVTRRNLPNFVF-PGGVR 411
M + V H LP+ VF PG R
Sbjct: 502 KLMSVKVVHTRNTALPDDVFLPGETR 527
>gi|440487552|gb|ELQ67335.1| Poly(A) polymerase pla1 [Magnaporthe oryzae P131]
Length = 484
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 116/272 (42%), Positives = 190/272 (69%), Gaps = 6/272 (2%)
Query: 56 VTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDSILQNADEQTVR 112
+T+L V DA VP++KF+FSG+SIDL+++R+ ++ +P D ++S ++L+ DE+ +R
Sbjct: 7 ITDLSVVVDAFVPIIKFEFSGISIDLIFSRIATMKQLPADPNWNLSDSNLLRGLDEKELR 66
Query: 113 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 172
S+NG RVTD+I+ LVP+ FRT LR ++ WA+RR +Y N+ GF GG+ WA+LVAR+CQL
Sbjct: 67 SVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGVAWAMLVARVCQL 126
Query: 173 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 232
YP A S++V++FF + +W WP PVLL AIE+G L ++W+P+ P D+YHLMPIITPA
Sbjct: 127 YPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLMPIITPA 186
Query: 233 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLR 291
YP M +++N++ S+ ++ E + ++ + + + W LF+ TFF + +K Y++
Sbjct: 187 YPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGK--LPWKDLFQKHTFFTKDFKYYIQ 244
Query: 292 IDISAENADDLRNWKGWVESRLRQLTLKIERH 323
+ ++++ + + W G+VES++R L +ERH
Sbjct: 245 VIAASKDKESHKLWSGFVESKVRLLVQGLERH 276
>gi|451845399|gb|EMD58712.1| hypothetical protein COCSADRAFT_265597 [Cochliobolus sativus
ND90Pr]
Length = 571
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 152/446 (34%), Positives = 233/446 (52%), Gaps = 49/446 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHAT--REEDFFGELHQMLTEMPEVTELHPVPDAH 66
+ G VHGP +DIDTL V P+ +FF + ++ + ++ E PV DA
Sbjct: 88 IFTFGSYALGVHGPSSDIDTLVVAPKFVAIHEFFEFFPPTFREMSNVDDINEFVPVEDAF 147
Query: 67 VPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILR 125
VP++K ++ VSIDLL+A L IP ++D + L+ E RS+NG RVT+++L
Sbjct: 148 VPIIKMEYREVSIDLLFASLPKRSSIPRNMDTIEKKDLEGLSESATRSVNGTRVTNELLD 207
Query: 126 LVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRF 185
VP+ +FR LR ++ W+ RRG+Y V G+ GG+ WA++VARICQLYP A + +VS+F
Sbjct: 208 AVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAIMVARICQLYPMANGATIVSKF 267
Query: 186 FRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
F + +W WP PV+L IEEG LGL+VW+P+ D+ HLMPIITPA+P M +++ V S
Sbjct: 268 FSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYGGDRAHLMPIITPAFPSMCATHTVMPS 327
Query: 246 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRN 304
TLRIM DEF R +I + + DW+ LFE +FF + +K YL + ++ +
Sbjct: 328 TLRIMKDEFGRADKILQHIFAGTK--DWNALFERHSFFTKDHKYYLSVVAASRTKEANST 385
Query: 305 WKGWVESRLRQLTLKIERHTYNMLQCHPH------------------------------- 333
+ G V+S++R + I+ + P+
Sbjct: 386 FSGLVQSKIRHIVKGIDDGQTGIDTARPYINYFERYHRCKDDQFHEVTQGSLEYMIPASE 445
Query: 334 -PGDFS----DKSKPLY-CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP 387
P D + D + +Y ++++GL +P + DI V +F+ ++ L
Sbjct: 446 VPADGTAPADDDTHIIYTTTFYIGLT----LPPDATKSLDISYPVSQFRSYITDSDLYDE 501
Query: 388 G-MQISVAHVTRRNLPNFVF-PGGVR 411
M + V H LP+ VF PG R
Sbjct: 502 KLMSVKVVHTRNTALPDDVFLPGETR 527
>gi|123480837|ref|XP_001323419.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121906284|gb|EAY11196.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 508
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 141/400 (35%), Positives = 223/400 (55%), Gaps = 12/400 (3%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G K V P +DID + + P+ +EE FF +++L +V L V +A+VP++K
Sbjct: 96 GSYKLGVCSPKSDIDCVILAPQFVQKEE-FFSIFYELLAADTKVKGLIKVEEAYVPIIKL 154
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
+ + D+ +A L L I +D+D+S DS+L+N + +VR+LN RV + +++LVP + N
Sbjct: 155 TYDDIEFDISFAALGLNNITDDIDLSPDSVLENLSKLSVRALNSLRVNNMVIKLVPNLDN 214
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
F+T L+ +R+WA +RG+Y NV G+ GG+N A+L A +CQ YP A P+ML FF +QW
Sbjct: 215 FKTLLKFVRYWAFKRGLYGNVYGYFGGVNLAILSAFVCQRYPTASPAMLALYFFSEISQW 274
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WP P+ + G L WDP D +MPIITPAYP NS + +TS+ ++
Sbjct: 275 TWPTPIYINRPNYGE--LLSWDPTTE-SDHNDVMPIITPAYPSTNSQRSATTSSRNRIIQ 331
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESR 312
E + +I + D+ W + E FFE+YKNY+ IDI AE D WKG V S+
Sbjct: 332 EMVKALQIMPNIIT--GDLPWSAVCEDHEFFESYKNYIEIDIRAEGLADYNWWKGTVISK 389
Query: 313 LRQLTLKIERHTYNMLQCHP-HPGDFSDKSKPLY-CSYFMGLQRKQGVPVGEGEQFDIRL 370
+++L +E ++C P P F ++ Y S F+GL+ ++ EG++ +
Sbjct: 390 VKRLITSLE--AIERVKCAPIFPSSFDRENNNKYQGSIFIGLETEK-TKDDEGKKVNPSA 446
Query: 371 TVKEFKQAVSMYTLRKPGMQISVAHV-TRRNLPNFVFPGG 409
+K++ + + T R +I V R+ +P+F FP G
Sbjct: 447 AIKKYLEEIYKLTNRPLSTKIENPQVINRKKIPDFCFPNG 486
>gi|340500382|gb|EGR27268.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 512
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/380 (34%), Positives = 218/380 (57%), Gaps = 26/380 (6%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L+ G K V+ +DID +C P ++ FFG+L +L++ EV ++ + VP
Sbjct: 95 LLIFGSYKLKVNQKNSDIDAVCFVPSFVECKKHFFGDLFHILSQKKEVEDIFSIQHTSVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K ++ G+ D+ +++ S DLDI ILQ DE+++R+LNG RV + + +
Sbjct: 155 LIKMRYFGIPFDISFSKQSQSQFKSDLDIKSIQILQGMDEKSIRALNGYRVAEWFNQNIK 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
F+ L+C++ WA+ R +YSN+ G+L GI W++LVA+ICQLYPN ++ RFF +
Sbjct: 215 NKDTFKKALKCIKLWAQNRCIYSNILGYLNGIAWSILVAKICQLYPNYFVYGIIERFFFL 274
Query: 189 YTQWRWPN-PVLLCAIEEGSLGLQVWDPRRNPKDK-YHLMPIITPAYPCMNSSYNVSTST 246
Y++W+W + V + I+E + + P++K M IITP +PC+N +YNV+ ST
Sbjct: 275 YSRWKWHDMAVQIEYIQEDIYNQMICGNQWVPENKGISNMMIITPCFPCINCAYNVTEST 334
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
LR++ ++FQ G+ I + ++KN++ D+ LF+PF FF+ Y +L+I I A+N ++ WK
Sbjct: 335 LRVIQEQFQYGYRILDEIQKNQSHYDYQDLFKPFEFFKRYNAFLQIRILAKNKNEYFQWK 394
Query: 307 GWVESRLRQLTLKIERHTYN-MLQCHPHP-----------GDFSDKSKPLYCSYFMGLQR 354
G VE LR+LT IE + ++ HP GD+S L C YF G++
Sbjct: 395 GHVEINLRKLTKIIENGKLSKIILIHPFSKFIDLCLKEQLGDYS-----LGCVYFYGIKV 449
Query: 355 KQGVPVGEGEQFDIRLTVKE 374
K Q DI+++ +E
Sbjct: 450 KDN-------QNDIQISFEE 462
>gi|340506959|gb|EGR32994.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 502
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/411 (36%), Positives = 240/411 (58%), Gaps = 27/411 (6%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L+ G K V+ G+DID +C+ P + RE++FFG+L +L++ E+TEL P+ +A VP
Sbjct: 94 LLFFGSYKLKVNSRGSDIDAVCLCPFYVEREKNFFGDLVHILSQKKEITELFPIQEASVP 153
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL-- 126
++K +F G+ DL +AR + +D++ + +L DE++ +S NG RV + + +
Sbjct: 154 IIKMQFQGILFDLSFARAPTQFQSDKIDLTSNQMLLGMDERSCKSFNGYRVAEWLSKKEN 213
Query: 127 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 186
+ +NF++ L+C++ WA+ RG+YSN+ G+L GI W +LV++ICQL+PN + L+ RFF
Sbjct: 214 IQNYENFQSILKCIKLWAQNRGIYSNIIGYLSGIGWTILVSKICQLFPNYSLNQLLERFF 273
Query: 187 RVYTQWRWPN-PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
+Y++WRW + PV + I + ++ + P+ K +M IITP +PCMN ++NVS++
Sbjct: 274 FLYSRWRWQDFPVQVEYIVDDVANSKLSADQWRPEYKSSMM-IITPCFPCMNCAHNVSST 332
Query: 246 TLRIMMDEFQRGHE-ICEAME--KNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDL 302
TLRI+ ++ G+E IC+ KN +D LF+ F FF+ YK++L I I A N +D
Sbjct: 333 TLRIIQEQLWHGYETICKIQNGSKNYSD-----LFKSFKFFKKYKHFLEIKILATNKNDY 387
Query: 303 RNWKGWVESRLRQLTLKIERHTY-NMLQCHPHPG---DFSDKSK------PLYCSYFMGL 352
WKG VES LR+LT E Y N+L+ HP+P +F D ++ C Y+ GL
Sbjct: 388 TVWKGHVESGLRKLTRLFESPQYMNLLEVHPYPSYIENFLDDTQSQKNKYKFQCKYYYGL 447
Query: 353 QRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRK--PGMQISVAHVTRRNL 401
Q E +++ F + + MY + K M I +H+ R L
Sbjct: 448 MCLQS---ENNESINLKEACVYFVEQLEMYPMNKVLESMNIQCSHLLRSEL 495
>gi|294948934|ref|XP_002785968.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900076|gb|EER17764.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 436
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/320 (37%), Positives = 190/320 (59%), Gaps = 15/320 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
++ G + V P +DIDTL + P +R++ F + ML P VTE +PVP AHVP
Sbjct: 105 VLTFGSFRLGVITPMSDIDTLVLLPNSISRDDFFTDFVETMLNRSPHVTECNPVPAAHVP 164
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K K+ G+ +D+L A + V+ D+D Q+ ++ + +++ ++S+NG RV D++L LV
Sbjct: 165 IIKVKYRGICMDILAACVPTHVLSGDVDSVQEELIYDVEKRCMKSMNGIRVADKMLSLVV 224
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
Q FR R +++WA++R +YSN G++GG++WA++V R+CQLYPN +V RFF V
Sbjct: 225 DTQTFRLATRVIKYWAQQRLIYSNAIGYMGGVSWAVMVGRVCQLYPNYSAKQIVERFFFV 284
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
Y +W+W G RR D++H+MP+ITP +P N++YNV S R
Sbjct: 285 YARWQW--------TATRDYGNSNAPRRRYTSDRHHVMPVITPIFPTHNTTYNVQESNKR 336
Query: 249 IMMDEFQRGHEICEAMEKNEA-------DVDWDTLFEPFTFFEAYKNYLRIDISAENADD 301
+++ E +RG EI E M N++ +V W L PF FF+ Y+ +L ++ISAE
Sbjct: 337 VIVREIKRGREIMELMSMNKSSGATKGNEVTWADLCAPFPFFQVYRQFLLLEISAETEKA 396
Query: 302 LRNWKGWVESRLRQLTLKIE 321
+KG VESR+R L +E
Sbjct: 397 FLKFKGLVESRIRVLVKNLE 416
>gi|428168831|gb|EKX37771.1| hypothetical protein GUITHDRAFT_158559 [Guillardia theta CCMP2712]
Length = 338
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/281 (45%), Positives = 172/281 (61%), Gaps = 6/281 (2%)
Query: 6 PLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDA 65
P L G + VH PGAD+DT+ + RH R+ D F +L+ + ++T L V +A
Sbjct: 50 PYQLRTFGSYRLDVHLPGADMDTVMIVTRHIHRD-DMFNDLYVAMQARKDITNLIKVQEA 108
Query: 66 HVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILR 125
VPV+KF+ DL ARLS IPED D++ D L+N D+Q+V SLNG RVTD I
Sbjct: 109 RVPVIKFQMDEFEFDLAMARLSYATIPEDFDVTDDKHLKNVDQQSVTSLNGVRVTDTIRS 168
Query: 126 LVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRF 185
LVP ++ + +R ++ WAK+RGVY NV GFLGGI+ ++ ARI QLYP A+PS L+ F
Sbjct: 169 LVPTMKTLKYCIRALKLWAKKRGVYKNVLGFLGGISLEIMAARIGQLYPKALPSRLLYFF 228
Query: 186 FRVYTQWRWPNPVLLCAIEEGS--LGLQVWD-PRRNPKDKYHLMPIITPAYPCMNSSYNV 242
F Y+QW+WP PV L + S L L VW D+ HLMPIITP YP N++ NV
Sbjct: 229 FFTYSQWKWPQPVGLTEVIANSHDLNLPVWGFGATEMSDRRHLMPIITPCYPAQNATANV 288
Query: 243 STSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 283
S STL++M +EF R +IC+ + E + +W LFEP F
Sbjct: 289 SKSTLKVMQEEFTRAKDICKQIL--EGNAEWSDLFEPLDPF 327
>gi|348667211|gb|EGZ07037.1| hypothetical protein PHYSODRAFT_307061 [Phytophthora sojae]
Length = 1061
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 153/467 (32%), Positives = 236/467 (50%), Gaps = 77/467 (16%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + + P +DID +CV P H T +DFF +L + P V+ L PVP+A+VP
Sbjct: 525 LFLAGSYRLGLDDPNSDIDAVCVAPWHVT-HDDFFSSFCHLLEQTPGVSHLAPVPNAYVP 583
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ F GV +DLL+ARL + + + +I D +L E ++++LN RV+ +L LVP
Sbjct: 584 LISLSFLGVRMDLLFARLPVSSVEPNQNIDSDHMLVGVHETSMKALNAPRVSSMLLCLVP 643
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ + +R LR +R WA+RRG+YS G+LGGI+WA+LVA +CQLYPNA P+ + RFF+V
Sbjct: 644 RRREYRIVLRAVRAWARRRGIYSAKLGYLGGISWAILVAFVCQLYPNAEPAKIFVRFFQV 703
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++W+WP PV+L I + LG +WDPR++ D+ H+MPIITPAYP MNSS VS T
Sbjct: 704 LSEWQWPQPVMLNMIYDAGLGFDMWDPRQSVFDRSHIMPIITPAYPHMNSSVQVSQPTFS 763
Query: 249 IMMDEFQRGHEICE--------------AMEKNEADVD---------------------- 272
++ +E R + E + E +EAD+
Sbjct: 764 VIYEELWRARYLAEIAVGISKPFPTAAPSPESSEADLKAAVVCMATSMPSFDQPLNAVDS 823
Query: 273 ----------------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL 316
WD LF+P FF Y +Y+ + A + + W +V+SRLR+L
Sbjct: 824 TEGVVQTTQGFGEGSAWDKLFQPSNFFIRYSSYMVFNFQAASESAMHKWGKFVQSRLRKL 883
Query: 317 TLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMGLQ----RKQGVPVGEGEQFD 367
+ H + + H P F +++ P C F+G++ R Q + + +
Sbjct: 884 VDNLH-HMSPVSRVHAFPRYFPHTCDAERRGPGSC-MFIGIEFHYRRHQTIQPKDDPEVK 941
Query: 368 IRLTVKEFKQAVSMYTL--------RKPGMQISVAHVTRRNLPNFVF 406
K +QA+ + ++P M ++ LP FVF
Sbjct: 942 -----KTLEQAIRFFLATDLQQMEDKQPDMTADAKVLSWEELPEFVF 983
>gi|297829196|ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
gi|297328320|gb|EFH58739.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
Length = 507
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 237/445 (53%), Gaps = 32/445 (7%)
Query: 5 LPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPD 64
LP GLG V+G +DID LC+GP A+ EDFF L ML EV+E+H V D
Sbjct: 79 LPYGSYGLG-----VYGSESDIDALCIGPFFASISEDFFISLRDMLKSRREVSEVHCVKD 133
Query: 65 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 124
A VP+++FKF G+ +DL YA+L + IP ++D+ L++ DE + +SL+G R IL
Sbjct: 134 AKVPLIRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKSLSGVRANKCIL 193
Query: 125 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSR 184
+LVP ++ F++ LRC++ WAKRRGVY N+ GFLGG++ A+L A +C NA S L++
Sbjct: 194 QLVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYESNATLSSLLAN 253
Query: 185 FFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 244
FF ++ W+WP PV+L + G P LMPI P + N++
Sbjct: 254 FFYIFAHWQWPTPVVLLEDTYPATGA--------PPG---LMPIQLPCGSHQYCNSNITR 302
Query: 245 STLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRN 304
ST +M EF RGH + + K + W LFE + + Y + +I +SA N +DL +
Sbjct: 303 STFYKIMAEFLRGHNLTKDYLK--PNFSWKNLFELYPYENTYTWFTKIHLSAANQEDLSD 360
Query: 305 WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-SKPLYCSYFMGLQRKQGVPVGEG 363
W GWV+SR R L KIE Y + C P+P ++ + +K ++ GLQ + + V
Sbjct: 361 WVGWVKSRFRCLLSKIE-EVYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRT-INVS-- 414
Query: 364 EQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLP-NFVFPGGVRPSRPSKGTW-- 420
DI EF + ++ + + P +I ++ V LP N R + +K W
Sbjct: 415 ---DIESVETEFLKNLNSGSFQGPVGRIQLSVVKESQLPKNGECASNNRSKKVTKTCWRI 471
Query: 421 -DSRRALERKVSSHTKPGADDGRKR 444
++++ V SH PG G ++
Sbjct: 472 RENKQCNNVPVYSHHLPGYVVGYQK 496
>gi|301092990|ref|XP_002997344.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262110742|gb|EEY68794.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 677
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 146/423 (34%), Positives = 223/423 (52%), Gaps = 40/423 (9%)
Query: 24 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLY 83
+D+D + P H E FF L + L + V++L A VPV+ F+ + V IDLL+
Sbjct: 231 SDLDVVAFMP-HTVTAEIFFSSLCEHLGQESSVSDLVARRKAAVPVLSFQLNSVRIDLLF 289
Query: 84 ARLSLW-VIPEDLDI---SQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 139
AR + +P+ L +++ D +VRSL+ RV IL LVP +R+ LR
Sbjct: 290 ARYAQQQAVPKHLPFLPGDDMQVMRGMDATSVRSLSVARVASLILELVPNASVYRSCLRV 349
Query: 140 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVL 199
+R WA+RRG+YSN AGFLGGI+WA+LV +CQ++P A + LV RFF V WRWP P+L
Sbjct: 350 IRLWARRRGLYSNKAGFLGGISWAILVCFVCQMFPRASVASLVHRFFSVLATWRWPTPIL 409
Query: 200 LCAIEEGSLGLQ--VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 257
+ G Q WDP+ N D+ HLMPIITP +P +N++ NV+ STLR++ +EF RG
Sbjct: 410 VAHPSNGGKTDQEVQWDPQHNIHDRAHLMPIITPGFPAVNTAVNVNISTLRVLREEFARG 469
Query: 258 HEICEAMEKNEAD--VDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQ 315
I + + + W+ LF P Y +++ I++ A N + L W +V SR R+
Sbjct: 470 QRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHHVAIELRAPNEEALAEWSSFVASRTRK 529
Query: 316 LTLKIERHTYNMLQCHPHP------GDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIR 369
L ++ HT ++ HP P G +D+S + +F+G P + + D R
Sbjct: 530 LVETLQ-HTPSISALHPLPDLVRAQGHETDESDAVVGYFFIGYTVNVP-PTPQPRRGDRR 587
Query: 370 LTVKE-----------FKQAVSMYTL------------RKPGMQISVAHVTRRNLPNFVF 406
+ + K +V+ T +KPGMQ+ + + + +LP+ +F
Sbjct: 588 HSARSPVITKNSQEELAKNSVASATRYFLATELNTAAEKKPGMQVDINYRSWNDLPSAIF 647
Query: 407 PGG 409
PGG
Sbjct: 648 PGG 650
>gi|301111045|ref|XP_002904602.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
gi|262095919|gb|EEY53971.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
Length = 677
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 148/425 (34%), Positives = 226/425 (53%), Gaps = 44/425 (10%)
Query: 24 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLY 83
+D+D + P H E FF L + L + V++L A VPV+ F+ + V IDLL+
Sbjct: 231 SDLDVVAFMP-HTVTAEIFFSSLCEHLGQESSVSDLVARRKAAVPVLSFQLNSVRIDLLF 289
Query: 84 ARLSLW-VIPEDLDI---SQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 139
AR + +P+ L +++ D +VRSL+ RV IL LVP +R+ LR
Sbjct: 290 ARYAQQQAVPKHLPFLPGDDMQVMRGMDATSVRSLSVARVASLILELVPNASVYRSCLRV 349
Query: 140 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVL 199
+R WA+RRG+YSN AGFLGGI+WA+LV +CQ++P A + LV RFF V WRWP P+L
Sbjct: 350 IRLWARRRGLYSNKAGFLGGISWAILVCFVCQMFPRASVASLVHRFFSVLATWRWPTPIL 409
Query: 200 LCAIEEGSLGLQ--VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 257
+ G Q WDP+ N D+ HLMPIITP +P +N++ NV+ STLR++ +EF RG
Sbjct: 410 VAHPSNGGKTDQEVQWDPQHNIHDRAHLMPIITPGFPAVNTAVNVNISTLRVLREEFARG 469
Query: 258 HEICEAMEKNEAD--VDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQ 315
I + + + W+ LF P Y +++ I++ A N + L W +V SR R+
Sbjct: 470 QRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHHVAIELRAPNEEALAEWSSFVASRTRK 529
Query: 316 LTLKIERHTYNMLQCHPHP------GDFSDKSKPLYCSYFMGL--------QRKQG---- 357
L ++ HT ++ HP P G +D+S + +F+G Q ++G
Sbjct: 530 LVETLQ-HTPSISALHPLPDLVRAQGHETDESDAVVGYFFIGYTVNVPSTPQPRRGDRRH 588
Query: 358 ---VPV-GEGEQFDIRLTVKEFKQAVSMYTL---------RKPGMQISVAHVTRRNLPNF 404
PV + Q ++ K + + Y L +KPGMQ+ + + + +LP+
Sbjct: 589 SARSPVITKNSQEEL---AKNSVASATRYFLATELNTAAEKKPGMQVDINYRSWNDLPSA 645
Query: 405 VFPGG 409
+FPGG
Sbjct: 646 IFPGG 650
>gi|238583172|ref|XP_002390161.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
gi|215453244|gb|EEB91091.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
Length = 309
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/212 (53%), Positives = 148/212 (69%), Gaps = 1/212 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGP +DIDTLCV P+H RE DFF ML E TE+ VP+A+VP
Sbjct: 79 IFTFGSYRLGVHGPSSDIDTLCVVPKHVQRE-DFFEVFEPMLREFEGATEVAGVPEAYVP 137
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ SG+ +D L ARL+L IPEDL + D++L+N DE+ VRSL G RV ++ILRLVP
Sbjct: 138 IITANISGIPLDFLMARLALSSIPEDLSLQDDNLLRNIDERCVRSLGGSRVANEILRLVP 197
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+Q FR +LRC++ WA+RR +YSNV GF GG+ WA++VARICQLYPNA+ +VSRFF +
Sbjct: 198 NVQVFRDSLRCIKLWAQRRAIYSNVNGFFGGVAWAMVVARICQLYPNAIAGAIVSRFFII 257
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 220
QW WP PVLL IEEG L ++VW+P+ K
Sbjct: 258 MYQWTWPQPVLLKQIEEGPLQVRVWNPKVRVK 289
>gi|348669628|gb|EGZ09450.1| hypothetical protein PHYSODRAFT_304981 [Phytophthora sojae]
Length = 695
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 218/422 (51%), Gaps = 39/422 (9%)
Query: 24 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLY 83
+D+D + P HA E FF L + L + V++L A VPV+ F+ S V +DLL+
Sbjct: 250 SDLDVVAFMP-HAITSEIFFSSLCEHLGKEASVSDLVARRKAAVPVLSFQLSSVRVDLLF 308
Query: 84 ARLSL-WVIPEDLDI---SQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 139
AR + +P+ L +++ D +VRSL+ RV IL LVP FR+TLR
Sbjct: 309 ARYAQKQAVPKHLPFLPGDDVQVMRGMDATSVRSLSVARVASLILELVPNASVFRSTLRV 368
Query: 140 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVL 199
+R WA+RRG+YSN AG+LGGI+WALLV +CQ++P A + LV RFF V WRWP P+L
Sbjct: 369 IRLWARRRGLYSNKAGYLGGISWALLVCFVCQMFPRASVASLVHRFFSVLASWRWPTPIL 428
Query: 200 LCAIEEGSL---GLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 256
+ G G+Q WDP N D+ HLMPIITP +P +N++ NV+ STLR++ +EF R
Sbjct: 429 VAHPSNGGKVDNGVQ-WDPAHNIHDRAHLMPIITPGFPAVNTAVNVNLSTLRVLREEFAR 487
Query: 257 GHEICEAMEKNEAD--VDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLR 314
G I + + + W+ LF P Y +++ I++ A N + L W +V SR R
Sbjct: 488 GQRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHHIAIELRAPNEEALAEWSSFVASRTR 547
Query: 315 QLTLKIERHTYNMLQCHP-----HPGDFSDKSKPLYCSYFMGL-------------QRKQ 356
+L ++ HT ++ HP P K + YF+G +R+
Sbjct: 548 KLVETLQ-HTPSVATLHPLPEIVRPQAAQAKEDEVVGYYFIGYTINTPPLPQPRRGERRH 606
Query: 357 GVPVGEGEQFDIRLTVKEFKQAVSMYTL---------RKPGMQISVAHVTRRNLPNFVFP 407
+ K + + Y L +KPGM++ + + + +LP+ VF
Sbjct: 607 SARAPAPKASSNEELAKNCVASATRYFLATELDAAAEKKPGMEVEINYRSWNDLPSTVFA 666
Query: 408 GG 409
GG
Sbjct: 667 GG 668
>gi|397621901|gb|EJK66507.1| hypothetical protein THAOC_12570 [Thalassiosira oceanica]
Length = 756
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 155/445 (34%), Positives = 220/445 (49%), Gaps = 74/445 (16%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGE-------------------------LH 47
G + VH PGADIDT+ V P +R+ DFFG L
Sbjct: 34 GSYRLGVHEPGADIDTIAVAPSFCSRD-DFFGSNYVPPGDAMDEGDDEDGEQARDPDSLA 92
Query: 48 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 107
+ + P VT PV +A VP++ F + G++IDLL+ARLS IP + DI D +L D
Sbjct: 93 ERIRRQPHVTNFVPVENAAVPILTFDWEGINIDLLFARLSTSSIPRNFDIDNDLVLSGVD 152
Query: 108 EQTVRSLNGCRVTDQILRLV----PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 163
T +SLNG RVT+ I LV + Q F T +R +R WAK RG+YSN G+ GG+N
Sbjct: 153 AATEKSLNGPRVTNLIAALVGGTEQRYQTFLTVVRLVRKWAKNRGLYSNKMGYWGGVNIN 212
Query: 164 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 223
+ VA + QLYPNA P+ + +FF V+ WRWPNPV+L + LGLQVW+ + +
Sbjct: 213 MAVALVLQLYPNACPASALRKFFLVFKSWRWPNPVMLTRPHDAELGLQVWNSHQ-AANMR 271
Query: 224 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 283
+ P+ITPAYP MNS+ +VS TL+I+ +EF RGH I + +
Sbjct: 272 QVAPMITPAYPAMNSTLSVSRQTLQILHEEFCRGHGIVDKL------------------- 312
Query: 284 EAYKNYL--------RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG 335
YK+Y R+ I+ D + W G+VESRLR+L + + + + P
Sbjct: 313 --YKDYQRGRDRPGGRLCITGPTLHDAQAWAGFVESRLRKLVSDMLGRSLPLSKIQLWPK 370
Query: 336 DF----SDKSKPLY-------CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ-AVSMYT 383
F +DK+ L +YF+G + + GEQ DI + F++ + +
Sbjct: 371 KFDVCCADKTALLTHAQRANSITYFIGFRVDK--LRMRGEQLDIERQLSNFRKFELGRFH 428
Query: 384 LRKPGMQISVAHVTRRNLPNFVFPG 408
PGM I + LP F G
Sbjct: 429 PLVPGMDILPKSFGVKELPTICFDG 453
>gi|170061473|ref|XP_001866247.1| poly a polymerase [Culex quinquefasciatus]
gi|167879711|gb|EDS43094.1| poly a polymerase [Culex quinquefasciatus]
Length = 554
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 135/326 (41%), Positives = 193/326 (59%), Gaps = 37/326 (11%)
Query: 1 MPRYLPLVLIG----LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEV 56
MP L L G G + SV+ G +ID LCV PR+ R+ D+FG ++L + PE
Sbjct: 244 MPEVLAEKLGGKIYTFGSYRLSVNHKGTNIDALCVAPRNIERQ-DYFGSFFELLKKQPEY 302
Query: 57 TELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNG 116
V +A VPV+K KF G+ IDLL+ARL+L IP+ D+ +D +L+N D + VRSLNG
Sbjct: 303 ---RAVEEALVPVVKMKFDGIKIDLLFARLALKEIPDKFDLREDMLLKNLDPKLVRSLNG 359
Query: 117 CRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA 176
CR TD+ILR VP I NFR L + G+YSN G+ GG++WA+LVAR CQL N
Sbjct: 360 CRATDEILRPVPNIDNFRLAL--------QHGIYSNSLGYFGGVSWAMLVARTCQLL-NV 410
Query: 177 VPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCM 236
V + V + F V+++W+ +LG Q+WDPR N + ++HLM IITPAYP
Sbjct: 411 VAATQVHKCFLVFSRWKL----------RQNLGFQLWDPRVNVQGQFHLMSIITPAYPQQ 460
Query: 237 NSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISA 296
NS+++VS ST ++M++EF RG +I + + ++A WD L ++ +++
Sbjct: 461 NSTFHVSRSTRKVMLNEFNRGMQITDEIMLDKA--GWDKLIATLSYSTL--------VTS 510
Query: 297 ENADDLRNWKGWVESRLRQLTLKIER 322
N DD W G VES++R L +ER
Sbjct: 511 NNTDDHLEWCGLVESKIRYLIQNLER 536
>gi|32527644|gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 483
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 146/399 (36%), Positives = 217/399 (54%), Gaps = 28/399 (7%)
Query: 5 LPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPD 64
LP GLG V+G +DID LC+GP A+ EDFF L ML EV+ELH V D
Sbjct: 53 LPYGSYGLG-----VYGSESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKD 107
Query: 65 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 124
A VP+++FKF G+ +DL YA+L + IP ++D+ L++ DE + +SL+G R IL
Sbjct: 108 AKVPLIRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKSLSGVRANKCIL 167
Query: 125 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSR 184
+LVP ++ F++ LRC++ WAKRRGVY N+ GFLGG++ A+L A +C PNA S L++
Sbjct: 168 QLVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLAN 227
Query: 185 FFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 244
FF + W+WP PV+L S G P LMPI P + ++
Sbjct: 228 FFYTFALWQWPTPVVLLEDTYPSTG--------APPG---LMPIQLPCGSHQYCNSTITR 276
Query: 245 STLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRN 304
ST ++ EF GH + + K + W LFE + + Y + +I +SA N +DL +
Sbjct: 277 STFYKIVAEFLLGHNLTKDYLK--LNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSD 334
Query: 305 WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-SKPLYCSYFMGLQRKQGVPVGEG 363
W GWV+SR R L +KIE Y + C P+P ++ + +K ++ GLQ + + V +
Sbjct: 335 WVGWVKSRFRCLLIKIE-EVYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRT-INVSDI 390
Query: 364 EQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLP 402
E I +F + V+ + R +I + V LP
Sbjct: 391 ESVKI-----DFLKNVNSGSFRGTVGRIQLTLVKASQLP 424
>gi|357115984|ref|XP_003559765.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 554
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 195/341 (57%), Gaps = 22/341 (6%)
Query: 2 PRYLPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHP 61
PR + ++ G HGP +DID LCVGP AT + FF L Q+L EV+ +
Sbjct: 141 PRRVTATVLTYGSYTLGAHGPESDIDALCVGPCIATLQHHFFVALRQILERRLEVSGMQT 200
Query: 62 VPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTD 121
V +A VP+M+F FSG+S+DL YA+L + E ++ S L+ D ++ RSL+G RV +
Sbjct: 201 VENAKVPLMRFTFSGISVDLTYAQLPVVDAVEAINTSSPQFLRRLDSRSWRSLSGVRVNE 260
Query: 122 QILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSML 181
QI++LVP + F+ LR ++ WA+RRG++ ++ GF GI+ A+L A ICQ YPNA + L
Sbjct: 261 QIVQLVPNAKKFQVLLRSIKLWARRRGLHCHLLGFFAGIHLAILAAYICQRYPNATANGL 320
Query: 182 VSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP---CMNS 238
+ FF ++ W W PV L P + + MPI+ P P CM+
Sbjct: 321 FTMFFEIFAHWDWQIPVNLHG-----------QPTNCKRSDGYYMPIVMPCTPPELCMS- 368
Query: 239 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAEN 298
N++ T + + +E RG+ + + + ++ D +W LF PF + Y+ +LRI + +
Sbjct: 369 --NMTKCTFKKIREELMRGYALTKDLWRH--DFEWTWLFAPFPYATRYQQFLRIALCSPT 424
Query: 299 ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 339
+++LR+W GWV+SR RQL LK+ER N L+C P+ + D
Sbjct: 425 SEELRDWTGWVKSRFRQLILKLER---NGLECDPYSSEEVD 462
>gi|145338191|ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana]
gi|62320636|dbj|BAD95301.1| poly(A) polymerase [Arabidopsis thaliana]
gi|332640894|gb|AEE74415.1| poly(A) polymerase 3 [Arabidopsis thaliana]
Length = 507
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 223/421 (52%), Gaps = 29/421 (6%)
Query: 5 LPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPD 64
LP GLG V+G +DID LC+GP A+ EDFF L ML EV+ELH V D
Sbjct: 77 LPYGSYGLG-----VYGSESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKD 131
Query: 65 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 124
A VP+++FKF G+ +DL YA+L + IP ++D+ L++ DE + + L+G R IL
Sbjct: 132 AKVPLIRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCIL 191
Query: 125 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSR 184
+LVP ++ F++ LRC++ WAKRRGVY N+ GFLGG++ A+L A +C PNA S L++
Sbjct: 192 QLVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLAN 251
Query: 185 FFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 244
FF + W+WP PV+L S G P LMPI P + ++
Sbjct: 252 FFYTFAHWQWPTPVVLLEDTYPSTG--------APPG---LMPIQLPCGSHQYCNSTITR 300
Query: 245 STLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRN 304
ST ++ EF GH + + K + W LFE + + Y + +I +SA N +DL +
Sbjct: 301 STFYKIVAEFLLGHNLTKDYLK--LNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSD 358
Query: 305 WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-SKPLYCSYFMGLQRKQGVPVGEG 363
W GWV+SR R L +KIE Y + C P+P ++ + +K ++ GLQ + + V +
Sbjct: 359 WVGWVKSRFRCLLIKIE-EVYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRT-INVSDI 414
Query: 364 EQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLP-NFVFPGGVRPSRPSKGTWDS 422
E I +F + V+ + R +I + V LP N R + +K W
Sbjct: 415 ESVKI-----DFLKNVNSGSFRGTVGRIQLTLVKASQLPKNGECGSNNRSKKVTKTCWRI 469
Query: 423 R 423
R
Sbjct: 470 R 470
>gi|298710751|emb|CBJ32172.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 533
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 171/306 (55%), Gaps = 30/306 (9%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + +H P +DID +CV P+ T E FF L + L P V ++ + A VP+++
Sbjct: 107 GSYRLRIHEPNSDIDAICVAPQFCTSEL-FFTTLKERLIAHPLVANVNAIQTAAVPIIEL 165
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 132
F + IDL A L + +P LDI D VP +
Sbjct: 166 VFDEIDIDLGLACLPVPTVPPTLDIDDDQ-------------------------VPNYDS 200
Query: 133 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
F +RC+R WAK RG+YSN G+LGG+N+ ++VA CQ+YPNA PS L+ RFF++ W
Sbjct: 201 FLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGW 260
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WPN + L + LGL+VW+ R N +H MPIITPAYP MNSS NVS TL +M
Sbjct: 261 NWPNAIQLVQPYDAELGLEVWNARAN---SWHCMPIITPAYPVMNSSANVSRFTLDVMTS 317
Query: 253 EFQRGHEICEAMEKNEADVD-WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 311
EF RG E+ + K + + + LFEP FF Y +YL +D+ A + D+ R W GWVES
Sbjct: 318 EFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVES 377
Query: 312 RLRQLT 317
RLR++T
Sbjct: 378 RLRKVT 383
>gi|401881479|gb|EJT45778.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 2479]
gi|406696602|gb|EKC99884.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 8904]
Length = 573
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 155/433 (35%), Positives = 209/433 (48%), Gaps = 99/433 (22%)
Query: 16 KYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFS 75
+ VHGPG+DIDT+CV P+H RE FFGE QML + P TE+ A VPVMK S
Sbjct: 80 RLGVHGPGSDIDTICVCPKHVYREH-FFGEFQQMLRDWPACTEIS---SAFVPVMKTVIS 135
Query: 76 GVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRT 135
GV +DLL+AR++L + LDI +D IL+ D+ + RSLN VTD IL LVP + FRT
Sbjct: 136 GVEVDLLFARVNLPEAGDKLDIEKDEILRGVDDASQRSLN---VTDMILNLVPDVATFRT 192
Query: 136 TLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWP 195
LR +R WAK F GG+ WALL ARICQLYPNA PS +VS+FF +Y QW
Sbjct: 193 ALRTIRLWAK---------SFPGGVAWALLTARICQLYPNAAPSTIVSKFFPIYYQW--- 240
Query: 196 NPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQ 255
MP+ITPAYP M S++N++ ST+ I+ +E
Sbjct: 241 ------------------------------MPVITPAYPSMCSTHNITQSTMTIIKNEML 270
Query: 256 RGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQ 315
R + N W LF P FF Y+ Y+++ SA +A DL++W LR
Sbjct: 271 RDKIV------NNPGSSWVELFTPVDFFSLYRTYVQVVASASSAQDLKDW-------LRT 317
Query: 316 LTLKIERHTYNMLQCHPHPG--------------------------------DFSDK--S 341
L +E T N+L HP D++DK +
Sbjct: 318 LVQDLE-MTDNVLLAHPQVNGISKTYICLTEEEQAQASQGELPPEAMMRKEEDYADKEHT 376
Query: 342 KPLYCSYFMGLQRKQGVPVGEG-EQFDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRR 399
K ++F+GL ++ G+ Q ++ K F A + + M + + R
Sbjct: 377 KVYTKNFFIGLDIEKKPKDGQQPRQLNLYYASKRFCFACQSWDKYNEQDMSVILRPCKRS 436
Query: 400 NLPNFVFPGGVRP 412
LP F FP G P
Sbjct: 437 ELPAFCFPDGQPP 449
>gi|294892267|ref|XP_002773978.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239879182|gb|EER05794.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 534
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 157/432 (36%), Positives = 230/432 (53%), Gaps = 45/432 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQM-LTEMPEVTELHPVPDAHV 67
L+ +G + + P +DID + V TR D F EL + L+E+ +VT L+PVP A V
Sbjct: 86 LMAIGSARLGLQDPSSDIDCVVVAAHKVTR--DAFFELFPLKLSELNDVTNLNPVPQAAV 143
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
PV+K KF GV +D+LY L+ + +D + D++L DE++ RS+NG RV+D I V
Sbjct: 144 PVIKMKFMGVDVDVLYCGLAHPLSGPAIDPADDNLLCGMDEKSARSINGVRVSDAIKACV 203
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P +F LR +R WA+RRG+YSN G+LGG++WA+LVAR+CQL+PN PS LV RFFR
Sbjct: 204 PHFAHFLGALRVIRAWARRRGIYSNALGYLGGVSWAILVARVCQLFPNMGPSQLVVRFFR 263
Query: 188 VYTQWRW---PNPVLLCAIE----EGSLGLQVW--DPRRNPKDK-----YHLMPIITPAY 233
VY++W W V+L E EG +VW P+R D+ M +ITPAY
Sbjct: 264 VYSRWNWDPSEGAVVLRHSEQRNGEGFQHHKVWCPPPKRTTTDQPLPLAASPMAVITPAY 323
Query: 234 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD-WDTLFEPFTFFE----AYKN 288
P MNS++ V+ T+ + E +RG I + + + W+TL EP FF+ YK
Sbjct: 324 PSMNSTFGVTRMTMDTIKKELERGAGIISSKGVDLRSRECWETLLEPIHFFDYDQGGYKQ 383
Query: 289 YLRIDISAENADDLRNWKGWVESRLRQLTLK----IERHTYNMLQCHPHPGDFS----DK 340
+L+I+I + ++ +G V S+L+ L L+ + N G + K
Sbjct: 384 FLQIEIGGASELSHKSAEGLVNSKLKPLLLRKMPEVAPEDTNKAPYRAWTGAVALEDPYK 443
Query: 341 SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ------AVSMYTLRKPGM-QISV 393
P + F+GL +P G D+R V+EF + A M + GM + V
Sbjct: 444 EYPYCSALFVGLS----IPPG----MDLRPAVREFMERLGIELATQMPEYKAGGMFDVRV 495
Query: 394 AHVTRRNLPNFV 405
HV +LPN V
Sbjct: 496 RHVAGPSLPNTV 507
>gi|55726267|emb|CAH89905.1| hypothetical protein [Pongo abelii]
Length = 304
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 147/208 (70%), Gaps = 1/208 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPR 216
+++W WPNPVLL EE +L L VWDPR
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|119602052|gb|EAW81646.1| poly(A) polymerase alpha, isoform CRA_d [Homo sapiens]
Length = 317
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 147/208 (70%), Gaps = 1/208 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPR 216
+++W WPNPVLL EE +L L VWDPR
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|1377872|gb|AAC52609.1| poly(A) polymerase V, partial [Mus musculus]
Length = 303
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 147/208 (70%), Gaps = 1/208 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 83 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 141
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 142 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 201
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 202 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 261
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPR 216
+++W WPNPVLL EE +L L VWDPR
Sbjct: 262 FSKWEWPNPVLLKQPEECNLNLPVWDPR 289
>gi|187469283|gb|AAI67010.1| Papola protein [Rattus norvegicus]
Length = 317
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 147/208 (70%), Gaps = 1/208 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPR 216
+++W WPNPVLL EE +L L VWDPR
Sbjct: 276 FSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|325184553|emb|CCA19046.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 799
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 229/430 (53%), Gaps = 40/430 (9%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + +H P +DID +C P H + DFF +LT M +VTEL VP+A VP
Sbjct: 328 LFLAGSYRLGLHDPDSDIDVVCAVPYHVS-HRDFFCGFSAVLTRMTQVTELVTVPNASVP 386
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ + + +DLL+A+L L I DLDI D IL +V+SLN RV+ IL LVP
Sbjct: 387 LISLSYQSIKLDLLFAQLPLLSIGADLDIHSDHILAGVSAASVKSLNAPRVSSMILSLVP 446
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
Q FR R +R WA+RRG+YS+ G+L GINWALL A +CQL+P S + FF V
Sbjct: 447 NRQVFRRVSRAIRAWARRRGIYSSKLGYLSGINWALLTAFVCQLFPGRTVSYVFVHFFYV 506
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++W+WP P++L + LGL+ W + +D+ H+MPIITPAYP MNSS V+ STL
Sbjct: 507 LSEWQWPKPIMLNIPYDAKLGLECWSFQL--RDRTHVMPIITPAYPQMNSSAQVTASTLS 564
Query: 249 IMMDEFQRGHEICE---------------------AMEKNEAD--VDWDTLFEPFTFFEA 285
++ +E R ++ E A+EK + D + WD L++P +FF
Sbjct: 565 VIKEELWRARDLLEREILSSITSHQQDQRTRKEAGALEKPDTDTFLSWDVLYQPSSFFVR 624
Query: 286 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY 345
Y Y+ + I +++ +L W+ +V SRL +L +K+ + + H +P +K+
Sbjct: 625 YDWYVGLTIQIDSS-ELGRWETFVCSRLHKL-VKMLQDLPMIDLVHGYPQFLVNKAGS-- 680
Query: 346 CSYFMGLQRKQG------VPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRR 399
S F+GL+R+ V F I +++ Q+ R MQ + +
Sbjct: 681 -SLFLGLKRRSEDDEEFLSSVNRTISFFIATDLQQNAQSSESPAKR---MQTTAVLLNWD 736
Query: 400 NLPNFVFPGG 409
+LP+FVF G
Sbjct: 737 DLPDFVFENG 746
>gi|357112525|ref|XP_003558059.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 537
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/328 (35%), Positives = 192/328 (58%), Gaps = 16/328 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
++ G +GP +DID +CVGP A+ + FF L QML E PEV++LH + A VP
Sbjct: 131 VLTFGSYALGAYGPESDIDAVCVGPCVASLQHHFFVVLRQMLEERPEVSDLHSIESARVP 190
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+M+FKF+GVS+D Y +L + E + +L+ D + R L+G RV QI++LVP
Sbjct: 191 LMRFKFNGVSVDFPYVQLPVINAAEAIRAFDPRLLEKVDGASWRCLSGVRVNRQIMQLVP 250
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
++ F+ LRC++ WA++RG+Y ++ G+ GI+ A+L A +C+ +PNA + L S FF +
Sbjct: 251 NMKRFQVLLRCLKLWARKRGIYCHLVGYFAGIHLAVLGAYVCRRHPNASVNTLFSMFFDI 310
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++ W WP PV A+ + + +W P D LMPI+ P +P + +++ ST
Sbjct: 311 FSHWPWPLPV---ALHDQA---PLWGP-----DGCSLMPIVMPCFPPEFCASSITKSTFN 359
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+ +E +RG + + + D+DW +F P+ + Y+++L + +SA ++LR+W GW
Sbjct: 360 KIKEELRRGFALTK--DIRNVDIDWTWIFAPYPYTVKYEHFLHMVLSAPTTEELRDWVGW 417
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGD 336
V+SR R L LK+E + C P P +
Sbjct: 418 VKSRFRNLILKLESLD---VDCDPDPSE 442
>gi|72391414|ref|XP_846001.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175902|gb|AAX70026.1| poly(A) polymerase, putative [Trypanosoma brucei]
gi|70802537|gb|AAZ12442.1| poly(A) polymerase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 687
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/344 (36%), Positives = 181/344 (52%), Gaps = 23/344 (6%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G +Y+VHG G+DID + + P TRE FF L L+ +TELH + DA VP
Sbjct: 84 IFATGSYRYNVHGSGSDIDIVLIAPNRITREH-FFNTLAPRLSHESRITELHCIRDARVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ G+ IDL + + +PE + D +LQ D+Q+V S N RV I+ LVP
Sbjct: 143 LIAMVADGIDIDLSFGSIRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMDLVP 199
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+FR LR ++ W K RG+YSN GF GI WA+LVA +CQ +PN + +V RFFR+
Sbjct: 200 HKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGMVVRFFRI 259
Query: 189 YTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNPKDKYHLMPIITPAYPCMNS 238
Y W PNP + L L + WDPR + D L P++TPA P N+
Sbjct: 260 YHTWFSPNPHGSGRENRAIYLTETMRVKTNLGRGWDPRESKSDALALFPVLTPAVPYGNA 319
Query: 239 SYNVSTSTLRIMMDEFQRGHEICEA-----MEKNEADVD----WDTLFEPFTFFEAYKNY 289
YNV+ + LR + DEF RGHEIC + +E+ + + W + EP FF YK Y
Sbjct: 320 CYNVTMTNLRQLCDEFARGHEICSSYIGMGVEETKMKLGPHGIWSKILEPVKFFGEYKYY 379
Query: 290 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH 333
L + ++ +A+ + + VES++R L L+ PH
Sbjct: 380 LHVQVTCTDAEAYQGYVDAVESKIRFLWAGTAESRAQSLESFPH 423
>gi|12322673|gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-39333 [Arabidopsis thaliana]
Length = 482
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 215/399 (53%), Gaps = 29/399 (7%)
Query: 5 LPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPD 64
LP GLG V+G +DID LC+GP A+ DFF L ML EV+ELH V D
Sbjct: 53 LPYGSYGLG-----VYGSESDIDALCIGPFFASIA-DFFISLRDMLKSRREVSELHCVKD 106
Query: 65 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 124
A VP+++FKF G+ +DL YA+L + IP ++D+ L++ DE + + L+G R IL
Sbjct: 107 AKVPLIRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCIL 166
Query: 125 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSR 184
+LVP ++ F++ LRC++ WAKRRGVY N+ GFLGG++ A+L A +C PNA S L++
Sbjct: 167 QLVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLAN 226
Query: 185 FFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 244
FF + W+WP PV+L S G P LMPI P + ++
Sbjct: 227 FFYTFAHWQWPTPVVLLEDTYPSTG--------APPG---LMPIQLPCGSHQYCNSTITR 275
Query: 245 STLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRN 304
ST ++ EF GH + + K + W LFE + + Y + +I +SA N +DL +
Sbjct: 276 STFYKIVAEFLLGHNLTKDYLK--LNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSD 333
Query: 305 WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-SKPLYCSYFMGLQRKQGVPVGEG 363
W GWV+SR R L +KIE Y + C P+P ++ + +K ++ GLQ + + V +
Sbjct: 334 WVGWVKSRFRCLLIKIE-EVYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRT-INVSDI 389
Query: 364 EQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLP 402
E I +F + V+ + R +I + V LP
Sbjct: 390 ESVKI-----DFLKNVNSGSFRGTVGRIQLTLVKASQLP 423
>gi|261329513|emb|CBH12495.1| poly(A) polymerase, putative [Trypanosoma brucei gambiense DAL972]
Length = 687
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/344 (36%), Positives = 180/344 (52%), Gaps = 23/344 (6%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G +Y+VHG G+DID + + P TRE FF L L+ +TELH + DA VP
Sbjct: 84 IFATGSYRYNVHGSGSDIDIVLIAPNRITREH-FFNTLAPRLSHESRITELHCIRDARVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ G+ IDL + + +PE + D +LQ D+Q+V S N RV I+ L P
Sbjct: 143 LIAMVADGIDIDLSFGSIRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMDLAP 199
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+FR LR ++ W K RG+YSN GF GI WA+LVA +CQ +PN + +V RFFR+
Sbjct: 200 HKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGMVVRFFRI 259
Query: 189 YTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNPKDKYHLMPIITPAYPCMNS 238
Y W PNP + L L + WDPR + D L P++TPA P N+
Sbjct: 260 YHTWFSPNPHGSGRENRAIYLTETMRVKTNLGRGWDPRESKSDALALFPVLTPAVPYGNA 319
Query: 239 SYNVSTSTLRIMMDEFQRGHEICEA-----MEKNEADVD----WDTLFEPFTFFEAYKNY 289
YNV+ + LR + DEF RGHEIC + +E+ + + W + EP FF YK Y
Sbjct: 320 CYNVTMTNLRQLCDEFARGHEICSSYIGMGVEETKMKLGPHGIWSKILEPVKFFGEYKYY 379
Query: 290 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH 333
L + ++ +A+ + + VES++R L L+ PH
Sbjct: 380 LHVQVTCTDAEAYQGYVDAVESKIRFLWAGTAESRAQSLESFPH 423
>gi|215768734|dbj|BAH00963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 546
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 121/333 (36%), Positives = 196/333 (58%), Gaps = 16/333 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
++ G +GP +DID +CVGP A+ + FF L QML E PEV++LH + +A VP
Sbjct: 137 VLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVSDLHSIENAKVP 196
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+M+FKF+G+ +D Y +L + E + +L +E + R L+G RV QI++L+P
Sbjct: 197 LMRFKFNGMLVDFPYVQLPVINAAEAIHAFDPRLLAAVNEPSWRCLSGVRVNRQIMQLLP 256
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I+ F+ LRC++ WA++RG++ ++ GF GI+ A+L A +C ++P+A S L + FF +
Sbjct: 257 NIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHATLSSLFNSFFDI 316
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++ W WP PV L +++ + W P MPI+ P P + +++ ST
Sbjct: 317 FSHWHWPLPVSL--LDQPT----PWRPH-----CCSFMPIVMPCSPPEFCASSITRSTFN 365
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+ +E QRG + + ++N D++W LF PF + YK++LRI +SA A++LR+W GW
Sbjct: 366 KIKEELQRGFALTKG-DRN-GDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELRDWVGW 423
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 341
V+SR R L LK+E + C P P + +D S
Sbjct: 424 VKSRFRNLLLKLESIG---VDCDPDPSEQADHS 453
>gi|297722067|ref|NP_001173397.1| Os03g0313200 [Oryza sativa Japonica Group]
gi|255674459|dbj|BAH92125.1| Os03g0313200 [Oryza sativa Japonica Group]
Length = 431
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 121/333 (36%), Positives = 196/333 (58%), Gaps = 16/333 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
++ G +GP +DID +CVGP A+ + FF L QML E PEV++LH + +A VP
Sbjct: 22 VLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVSDLHSIENAKVP 81
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+M+FKF+G+ +D Y +L + E + +L +E + R L+G RV QI++L+P
Sbjct: 82 LMRFKFNGMLVDFPYVQLPVINAAEAIHAFDPRLLAAVNEPSWRCLSGVRVNRQIMQLLP 141
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I+ F+ LRC++ WA++RG++ ++ GF GI+ A+L A +C ++P+A S L + FF +
Sbjct: 142 NIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHATLSSLFNSFFDI 201
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++ W WP PV L +++ + W P MPI+ P P + +++ ST
Sbjct: 202 FSHWHWPLPVSL--LDQPT----PWRPH-----CCSFMPIVMPCSPPEFCASSITRSTFN 250
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+ +E QRG + + ++N D++W LF PF + YK++LRI +SA A++LR+W GW
Sbjct: 251 KIKEELQRGFALTKG-DRN-GDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELRDWVGW 308
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 341
V+SR R L LK+E + C P P + +D S
Sbjct: 309 VKSRFRNLLLKLESIG---VDCDPDPSEQADHS 338
>gi|219117850|ref|XP_002179712.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217408765|gb|EEC48698.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 336
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/300 (42%), Positives = 175/300 (58%), Gaps = 30/300 (10%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFG-----------------ELHQMLTEMPE 55
G + VH PGADIDT+ V P +A + DFFG L + + P+
Sbjct: 41 GSYRLGVHEPGADIDTILVSP-NACQRMDFFGTTILSTVEGEEGTRDPTSLAERIRTHPD 99
Query: 56 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 115
VT PV A VP++ F + G++IDLL+ARL+ +P D DI D++L AD T +SLN
Sbjct: 100 VTNFVPVESAAVPILTFDWEGINIDLLFARLNTASVPPDFDIDNDAVLDGADGATEKSLN 159
Query: 116 GCRVTDQILRLVP----KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 171
G RVT+ I LV + Q F T +RC+R WAK RG+YSN G+ GG+N + VA + Q
Sbjct: 160 GPRVTNLIAALVSGTPQRYQVFLTVVRCVRKWAKARGLYSNKMGYWGGVNINIGVALVVQ 219
Query: 172 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 231
LYPNA + L+ +FF V+ WRWP P+LL + GL VW + + P+ITP
Sbjct: 220 LYPNACGASLLRKFFLVFKTWRWPQPLLLTKPHDAGYGLPVWSVATAVR---QVAPMITP 276
Query: 232 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAM----EKNEA-DVDWDTLFEPFTFFEAY 286
AYP MNS+ VS TL+I+ +EF RGH + + + +KN A +++W+TLFEP FF Y
Sbjct: 277 AYPAMNSTLAVSRQTLQILQEEFNRGHTVVDQLWKDYQKNPAQELNWNTLFEPSDFFINY 336
>gi|428168713|gb|EKX37654.1| hypothetical protein GUITHDRAFT_41551, partial [Guillardia theta
CCMP2712]
Length = 336
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/325 (38%), Positives = 183/325 (56%), Gaps = 16/325 (4%)
Query: 27 DTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL 86
D + + R+ R D F +L+ + ++ +L V +A PV+KF+ L ARL
Sbjct: 1 DAVMIVTRYIDRS-DMFDDLYVAMQAREDIKDLIKVQEARAPVIKFRMDDFEFKLSMARL 59
Query: 87 SLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKR 146
+ +PED D++ D L+N D ++V SLN RVTD I LVP + +F+ ++ ++FWAK+
Sbjct: 60 NYATLPEDFDVTDDKHLKNVDPESVASLNSVRVTDTIRSLVPNLISFKYCIQALKFWAKK 119
Query: 147 RGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG 206
RGVY+N GFLG I+ ++ ARICQLYP A+PS L+ FF Y QW+WP PV L I
Sbjct: 120 RGVYNNGLGFLGSISLEIMAARICQLYPKALPSRLLYFFFFTYCQWKWPQPVELAEIVAN 179
Query: 207 S--LGLQVWD-PRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA 263
S L L VW D+ HLMPII+P YP N++ VS STL+IM + F R +C+
Sbjct: 180 SHDLNLPVWGYGATEMSDRRHLMPIISPCYPAQNTAALVSRSTLKIMKEMFIRAMGVCKQ 239
Query: 264 MEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 323
+ + +A W LFEP F Y N+L+I SA + D WKG+ + + + +ER
Sbjct: 240 IHEGKA--GWCDLFEPVDLFSTYANFLQIQASARSKADHNMWKGFCAANIHNMISYLER- 296
Query: 324 TYNMLQCHPHPGDFSDKSKPLYCSY 348
C P + D++ P+ SY
Sbjct: 297 ------C---PDAYLDRAHPIQRSY 312
>gi|58220771|gb|AAW68017.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 431
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/333 (36%), Positives = 196/333 (58%), Gaps = 16/333 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
++ G +GP +DID +CVGP A+ + FF L QML E PEV++LH + +A VP
Sbjct: 22 VLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVSDLHSIENAKVP 81
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+M+FKF+G+ +D Y +L + E + +L +E + R L+G RV QI++L+P
Sbjct: 82 LMRFKFNGMLVDFPYVQLPVINAAEAIHAFDPRLLAVVNEPSWRCLSGVRVNRQIMQLLP 141
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I+ F+ LRC++ WA++RG++ ++ GF GI+ A+L A +C ++P+A S L + FF +
Sbjct: 142 NIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHATLSSLFNSFFDI 201
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++ W WP PV L +++ + W P MPI+ P P + +++ ST
Sbjct: 202 FSHWHWPLPVSL--LDQPT----PWRPH-----CCSFMPIVMPCSPPEFCASSITRSTFN 250
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+ +E QRG + + ++N D++W LF PF + YK++LRI +SA A++LR+W GW
Sbjct: 251 KIKEELQRGFALTKG-DRN-GDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELRDWVGW 308
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 341
V+SR R L LK+E + C P P + +D S
Sbjct: 309 VKSRFRNLLLKLESIG---VDCDPDPSEQADHS 338
>gi|401418000|ref|XP_003873492.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489722|emb|CBZ24982.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 706
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 131/356 (36%), Positives = 183/356 (51%), Gaps = 29/356 (8%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G +Y+VH G+DID + + P TRE FF L L P VTELH + ++ VP
Sbjct: 87 IFATGSYRYNVHTSGSDIDMVLIAPSRITREH-FFNTLAPRLKGEPWVTELHCIRESRVP 145
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ G+ IDL + + +PE + D +LQ DEQ+V S N RV I+ LVP
Sbjct: 146 IIAMVCDGIDIDLSFGSIRQDRVPE---VITDDLLQGLDEQSVLSCNAVRVAHNIMDLVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
FR TLR ++ W K R +YSN GF GI WA+L A +CQ YPN + +++RFFR
Sbjct: 203 NKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIGWAILTAFVCQCYPNQNAAGMITRFFRT 262
Query: 189 YTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNPKDKYHLMPIITPAYPCMNS 238
Y W PNP + L L + WDPR + D L P++TPA P N+
Sbjct: 263 YHTWFKPNPHETGTENRAIYLTESMRARTHLGRGWDPRESKSDAMALFPVLTPAVPYGNT 322
Query: 239 SYNVSTSTLRIMMDEFQRGHEICE---AMEKNEADVD------WDTLFEPFTFFEAYKNY 289
YNV+ + LR + DEFQRGH++ M EA W + EP FF +++Y
Sbjct: 323 CYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAKFGPFGVWSRVLEPAPFFGKFQHY 382
Query: 290 LRIDISAENADDLRNWKGWVESRLRQL---TLKIERHT---YNMLQCHPHPGDFSD 339
L+I +S +A+ + + VESR+R L HT Y L+ H +P F D
Sbjct: 383 LQIKVSCSDAEHYQAYADGVESRIRILWAGNASSRGHTLEDYRQLRLHLNPHRFED 438
>gi|342182011|emb|CCC91490.1| putative poly(A) polymerase [Trypanosoma congolense IL3000]
Length = 677
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 178/344 (51%), Gaps = 23/344 (6%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G +Y+VHG G+DID + + P TRE FF L L+ P +T+LH + DA VP
Sbjct: 84 IFATGSYRYNVHGSGSDIDIVLIAPNRITREH-FFNTLAPRLSHEPRITKLHCIRDARVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ G+ IDL + + +PE + D +LQ D+Q+V S N RV I+ LVP
Sbjct: 143 LIAMVADGIDIDLSFGSIRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMDLVP 199
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+FR LR ++ W K RG+YSN GF GI WA+LVA +CQ +PN + +V RFFR+
Sbjct: 200 HKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGMVVRFFRI 259
Query: 189 YTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNPKDKYHLMPIITPAYPCMNS 238
Y W PNP + L L + WDPR + D L P++TPA P N+
Sbjct: 260 YHAWFSPNPQGSGKENRAIYLTETMRVKTNLGRCWDPRESKSDALALFPVLTPAVPYGNA 319
Query: 239 SYNVSTSTLRIMMDEFQRGHEICEA---MEKNEADVD------WDTLFEPFTFFEAYKNY 289
+NV+ + LR + EF RGH IC + M NE W + EP FF YK Y
Sbjct: 320 CFNVTMTNLRQLCAEFSRGHNICSSCIGMNVNETKEKFGPHGLWSKILEPVKFFGEYKYY 379
Query: 290 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH 333
+ + ++ +A+ + + VES++R L ++ PH
Sbjct: 380 MHVQVTCSDAELYQGYVEAVESKIRFLWAGTAESRAQSIESFPH 423
>gi|407396778|gb|EKF27540.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 645
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 149/466 (31%), Positives = 211/466 (45%), Gaps = 78/466 (16%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G +Y+VH G+DID + + P TRE FF L L P +TELH + DA VP
Sbjct: 84 IFATGSYRYNVHASGSDIDIVLIAPNRITREH-FFNTLAPRLQHEPRITELHCIRDARVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ G+ IDL + + +PE + D +LQ D+Q+V S N RV I+ LVP
Sbjct: 143 LIAMVADGIDIDLSFGSIRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMDLVP 199
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+FR LR ++ W K RG+YSN GF GI WA+LVA +CQ +PN + +V RFFR+
Sbjct: 200 HKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGIVVRFFRI 259
Query: 189 YTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNPKDKYHLMPIITPAYPCMNS 238
Y W PNP + L L + WDPR + D L P++TPA P N+
Sbjct: 260 YHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRESKSDAMALFPVLTPAVPYGNA 319
Query: 239 SYNVSTSTLRIMMDEFQRGHEIC---------EAMEKNEADVDWDTLFEPFTFFEAYKNY 289
+NV+ + LR + EF RGHEIC EA + W L EP FF YK Y
Sbjct: 320 CFNVTLTNLRQLCAEFARGHEICSSSLVASAEEAKSRFGPHGIWSRLLEPVKFFGNYKYY 379
Query: 290 LRIDISAENADDLRNWKGWVESRLRQL----------TLKIERHTYNMLQ---------- 329
L + +S +A+ + + VES++R L L+ RH L
Sbjct: 380 LHVLVSCTDAEAYQGYVDAVESKIRFLWAGTAESRGYALENVRHVRIQLNPRRYEAPEEV 439
Query: 330 ------------------------CHPHPGDFSDKSKP--LYCSYFMGLQRKQGVPVGEG 363
H G D S P C YF+G+ P G
Sbjct: 440 ETRARLLKKTSRSSGGGNGSMEVSSHQTSGAMDDSSAPKIFSCHYFIGMSVDPKAPSG-- 497
Query: 364 EQFDIRLTVKEFKQAVSMYTLRKPGMQ----ISVAHVTRRNLPNFV 405
+ D+ +++ F V K G+ I+V +++ +P FV
Sbjct: 498 -KIDLAPSIRAFHGIVRQLRQYKEGITRLPVITVEDISK--IPAFV 540
>gi|146081651|ref|XP_001464305.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|398012599|ref|XP_003859493.1| poly(A) polymerase, putative [Leishmania donovani]
gi|134068396|emb|CAM66686.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|322497708|emb|CBZ32784.1| poly(A) polymerase, putative [Leishmania donovani]
Length = 709
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 131/356 (36%), Positives = 183/356 (51%), Gaps = 29/356 (8%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G +Y+VH G+DID + + P TRE FF L L P VT+LH + ++ VP
Sbjct: 87 IFATGSYRYNVHTSGSDIDMVLIAPSRITREH-FFNTLAPRLKSEPWVTDLHCIRESRVP 145
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ G+ IDL + + +PE + D +LQ DEQ+V S N RV I+ LVP
Sbjct: 146 IIAMVCDGIDIDLSFGSIRQDRVPE---VITDDLLQGLDEQSVLSCNAVRVAHNIMDLVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
FR TLR ++ W K R +YSN GF GI WA+L A +CQ YPN + +V+RFFR
Sbjct: 203 NKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIGWAILTAFVCQCYPNQNAAGMVTRFFRT 262
Query: 189 YTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNPKDKYHLMPIITPAYPCMNS 238
Y W PNP + L L + WDPR + D L P++TPA P N+
Sbjct: 263 YHTWFKPNPHETGTENRAIYLTESMRARTHLGRGWDPRESKSDAMALFPVLTPAVPYGNT 322
Query: 239 SYNVSTSTLRIMMDEFQRGHEICE---AMEKNEADVD------WDTLFEPFTFFEAYKNY 289
YNV+ + LR + DEFQRGH++ M EA W + EP FF +++Y
Sbjct: 323 CYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAKFGPFGVWSRVLEPAPFFGKFQHY 382
Query: 290 LRIDISAENADDLRNWKGWVESRLRQL---TLKIERHT---YNMLQCHPHPGDFSD 339
L+I +S +A+ + + VESR+R L HT Y L+ H +P F D
Sbjct: 383 LQIKVSCSDAEHYQAYADGVESRIRILWAGNASSRGHTLEDYRQLRLHLNPRRFED 438
>gi|402468353|gb|EJW03519.1| hypothetical protein EDEG_00201 [Edhazardia aedis USNM 41457]
Length = 1051
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 135/442 (30%), Positives = 229/442 (51%), Gaps = 91/442 (20%)
Query: 31 VGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV 90
+G H ++++ + ++T LH + DA+VP++KF+ + +SIDLL+ R+ L
Sbjct: 598 LGQEHTDKDKNLISGI--------KITNLHKIEDAYVPLIKFEINYISIDLLFTRVPL-P 648
Query: 91 IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVY 150
+L++ D++L+N D++++ S+NG RVTD ++ LVP ++ F + LR +++WAKRRG+Y
Sbjct: 649 SLSNLNLLDDTLLKNMDDKSILSINGSRVTDMLINLVPNVKVFHSALRAIKYWAKRRGIY 708
Query: 151 SNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGL 210
N G+ GG+ +A+LVARICQ YPN ++ +FF +Y+ W+WPNPVLL + + L
Sbjct: 709 GNSFGYPGGVAYAILVARICQYYPNKDSYTILYKFFEIYSNWKWPNPVLLKHNVDRNFNL 768
Query: 211 QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR-------------- 256
++WDP+ + D+ H MPIITPAYP + S++NV+ +TL ++ +E +R
Sbjct: 769 KIWDPKVHQTDRMHKMPIITPAYPSICSTHNVTNTTLGVINEELKRCLDIFKESKNIDSS 828
Query: 257 -------GHE-------------------ICEAMEKN-EADVDWD--------------- 274
GHE I E E N V WD
Sbjct: 829 FDETKIFGHESDINCASKQSIDPKSKKLKIGEDHENNINTKVKWDLNNLSFDNLKVFYEK 888
Query: 275 ------TLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT---- 324
LF+ FF+ YK YL I ++ ++ WKG++ES++R L K+E
Sbjct: 889 FYGLLKKLFQQSDFFKKYKFYLNIKLTNDDK-----WKGFIESKIRLLCAKLENSEGFSI 943
Query: 325 -YNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT 383
Y M++ P P F + +F+GL K + + +I V +F + ++ +
Sbjct: 944 GY-MIKAVPFPQSFVYND---FVHFFVGLDYKDRIKI------NIDKPVNDFLRILNDWD 993
Query: 384 LRKPGMQISVAHVTRRNLPNFV 405
+ G +IS+ ++ + F+
Sbjct: 994 KKDEGSEISIKINKKKEIGEFL 1015
>gi|157866653|ref|XP_001687718.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
gi|68125332|emb|CAJ03188.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
Length = 700
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/356 (36%), Positives = 183/356 (51%), Gaps = 29/356 (8%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G +Y+VH G+DID + + P TRE FF L L P VT+LH + ++ VP
Sbjct: 87 IFATGSYRYNVHTSGSDIDMVLIAPSRITREH-FFNTLAPRLKSEPWVTDLHCIRESRVP 145
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ G+ IDL + + +PE + D +LQ DEQ+V S N RV I+ LVP
Sbjct: 146 IIAMVCDGIDIDLSFGSIRQDRVPE---VITDDLLQGLDEQSVLSCNAVRVAHNIMDLVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
FR TLR ++ W K R +YSN GF GI WA+L A +CQ YPN + +V+RFFR
Sbjct: 203 NKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIGWAILTAFVCQCYPNQNAAGMVTRFFRT 262
Query: 189 YTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNPKDKYHLMPIITPAYPCMNS 238
Y W PNP + L L + WDPR + D L P++TPA P N+
Sbjct: 263 YHTWFKPNPHETGTENRAIYLTESMRARTHLGRGWDPRESKSDAMALFPVLTPAVPYGNT 322
Query: 239 SYNVSTSTLRIMMDEFQRGHEICE---AMEKNEADVD------WDTLFEPFTFFEAYKNY 289
YNV+ + LR + DEFQRGH++ M EA W + EP FF +++Y
Sbjct: 323 CYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAKFGPFGVWSRVLEPAPFFGKFQHY 382
Query: 290 LRIDISAENADDLRNWKGWVESRLRQL---TLKIERHT---YNMLQCHPHPGDFSD 339
L+I +S +A+ + + VESR+R L HT Y L+ H +P F D
Sbjct: 383 LQIKVSCSDAEHYQAYADGVESRIRILWAGNASSRGHTLEDYRQLRLHLNPRRFED 438
>gi|24059888|dbj|BAC21354.1| poly(A) polymerase-like protein [Oryza sativa Japonica Group]
Length = 472
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/312 (39%), Positives = 181/312 (58%), Gaps = 22/312 (7%)
Query: 12 LGYDKYSV--HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 69
L Y Y++ HGP +DID LCVGP AT + FF L Q+L + PEV+EL V A VP+
Sbjct: 74 LTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVSELQTVESAKVPL 133
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
M+F+FSG+S+D YA+L + S +LQ D + RSL+G RV +QI++LVP
Sbjct: 134 MRFRFSGISVDFTYAQLP------AIITSNPHLLQKLDSLSWRSLSGVRVNEQIVQLVPN 187
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
Q F+ LRC++ WAKRRG++ ++ GF GI+ A+L A +CQ YP + L + FF ++
Sbjct: 188 AQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGTINGLFTIFFDIF 247
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
W W PV SL Q + RR P + MPI+ P P + N++ T +
Sbjct: 248 AHWNWQIPV--------SLHGQPTNCRR-PDGSF--MPILLPCTPPEFCTSNMTKGTFKK 296
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 309
+ +E RG+ + + E D +W LF PF + Y+ +LRI + A +++LR+W GWV
Sbjct: 297 IREELMRGYALTK--EPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELRDWAGWV 354
Query: 310 ESRLRQLTLKIE 321
+SR L LK+E
Sbjct: 355 KSRF-NLILKLE 365
>gi|154334339|ref|XP_001563421.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134060437|emb|CAM37605.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 709
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 182/356 (51%), Gaps = 29/356 (8%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G +Y+VH G+DID + + P TRE FF L L P VTELH + ++ VP
Sbjct: 87 IFATGSYRYNVHTSGSDIDMVLIAPSRITREH-FFNTLAPRLKGEPWVTELHCIRESRVP 145
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ G+ IDL + + +PE + D +LQ DEQ+V S N RV I+ LVP
Sbjct: 146 IIAMVCDGIDIDLSFGSIRQDRVPE---VITDDLLQGLDEQSVLSCNAVRVAHNIMDLVP 202
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
FR LR ++ W K R +YSN GF GI WA+L A +CQ YPN + +++RFFR
Sbjct: 203 NKAVFRQALRFVKAWGKARSIYSNTFGFPSGIGWAILTAFVCQCYPNQNAAGMITRFFRT 262
Query: 189 YTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNPKDKYHLMPIITPAYPCMNS 238
Y W PNP + L L + WDPR + D L P++TPA P N+
Sbjct: 263 YHTWFKPNPHETGTENRAIYLTESMRARTHLGRGWDPRESKSDAMALFPVLTPAVPYGNT 322
Query: 239 SYNVSTSTLRIMMDEFQRGHEICE---AMEKNEADVD------WDTLFEPFTFFEAYKNY 289
YNV+ + LR + DEFQRGH++ M EA+ W + EP FF +++Y
Sbjct: 323 CYNVTLTNLRQLCDEFQRGHDLLSNDLGMSAVEAEAKFGPFGVWSRVLEPAPFFGKFRHY 382
Query: 290 LRIDISAENADDLRNWKGWVESRLRQL---TLKIERHT---YNMLQCHPHPGDFSD 339
L I +S +A+ + + VESR+R L HT Y L+ H +P F D
Sbjct: 383 LHIKVSCSDAEHYQAYADGVESRIRILWAGNASSRGHTLEDYRQLRLHLNPRRFED 438
>gi|71419820|ref|XP_811284.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70875931|gb|EAN89433.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 645
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 172/327 (52%), Gaps = 23/327 (7%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G +Y+VH G+DID + + P TRE FF L L P +TELH + DA VP
Sbjct: 84 IFATGSYRYNVHASGSDIDIVLIAPNRITREH-FFNTLAPRLQHEPRITELHCIRDARVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ G+ IDL + + +PE + D +LQ D+Q+V S N RV I+ LVP
Sbjct: 143 LIAMVADGIDIDLSFGSIRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMDLVP 199
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+FR LR ++ W K RG+YSN GF GI WA+LVA +CQ +PN + +V RFFR+
Sbjct: 200 HKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGIVVRFFRI 259
Query: 189 YTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNPKDKYHLMPIITPAYPCMNS 238
Y W PNP + L L + WDPR + D L P++TPA P N+
Sbjct: 260 YHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRESKSDAMALFPVLTPAVPYGNA 319
Query: 239 SYNVSTSTLRIMMDEFQRGHEIC---------EAMEKNEADVDWDTLFEPFTFFEAYKNY 289
+NV+ + LR + EF RGHEIC EA + W L EP FF +K Y
Sbjct: 320 CFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGIWSRLLEPVKFFGEHKYY 379
Query: 290 LRIDISAENADDLRNWKGWVESRLRQL 316
L + +S +A+ + + VESR+R L
Sbjct: 380 LHVLVSCTDAEAYQGYVDAVESRIRFL 406
>gi|414888171|tpg|DAA64185.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 545
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 124/347 (35%), Positives = 193/347 (55%), Gaps = 39/347 (11%)
Query: 12 LGYDKYSV--HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 69
L Y Y++ HGP +DID LC+GP AT + FF L Q+L PEV+E+H V A VP+
Sbjct: 138 LTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSEVHTVEKAKVPL 197
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
M+F+F+G+++DL YA+L + + ++ +LQ D ++ RSL+G RV +QI++LVP
Sbjct: 198 MRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVRVNEQIVQLVPN 257
Query: 130 ---------IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 180
+Q F+T LRC++ WA++RG++ + GF GI+ A+L A +C+ +P+A S
Sbjct: 258 AEFCFTGNTMQKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASVSG 317
Query: 181 LVSRFFRVYTQWRWPNPVLL------CAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 234
L + FF+ + W W PV L C EG LMPI+ P P
Sbjct: 318 LFAVFFQTFAHWPWQVPVSLHDELTTCLHSEG-----------------RLMPIVMPCTP 360
Query: 235 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 294
+ V+ +L+ + +E RG+ + ++ D W LFEPF + + Y+ +LRI +
Sbjct: 361 PEFCASTVTKGSLKKIREELTRGYVLTRDPLRH--DFQWSWLFEPFPYDQKYQQFLRIAL 418
Query: 295 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 341
A +L +W GWV+SR R L LK+ER ++C P P + D +
Sbjct: 419 RAPTIAELGDWAGWVKSRFRFLILKLERAG---IECDPCPSEEVDHT 462
>gi|82655167|emb|CAJ43765.1| poly(A) polymerase alpha [Oncorhynchus mykiss]
Length = 167
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 102/167 (61%), Positives = 129/167 (77%)
Query: 65 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 124
A VPV+K F + ID+L+ARL+L IPE+LD+ D +L+N D + +RSLNGCRVTD+IL
Sbjct: 1 AVVPVIKLSFDSIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEIL 60
Query: 125 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSR 184
LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNAV S LV +
Sbjct: 61 HLVPNIENFRLTLRTIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVHK 120
Query: 185 FFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 231
FF V+++W WPNPVLL E+ +L L VW PR P D+YHLMPIITP
Sbjct: 121 FFLVFSKWEWPNPVLLKQPEDCNLNLPVWGPRVTPSDRYHLMPIITP 167
>gi|407832565|gb|EKF98495.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 645
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 146/466 (31%), Positives = 211/466 (45%), Gaps = 78/466 (16%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G +Y+VH G+DID + + P TRE FF L L P +TELH + DA VP
Sbjct: 84 IFATGSYRYNVHASGSDIDIVLIAPNRITREH-FFNTLAPRLQHEPRITELHCIRDARVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ G+ IDL + + +PE + D +LQ D+Q+V S N RV I+ LVP
Sbjct: 143 LIAMVADGIDIDLSFGSIRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMDLVP 199
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+FR LR ++ W K RG+YSN GF GI WA+LVA +CQ +PN + +V RFFR+
Sbjct: 200 HKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGIVVRFFRI 259
Query: 189 YTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNPKDKYHLMPIITPAYPCMNS 238
Y W PNP + L L + WDPR + D L P++TPA P N+
Sbjct: 260 YHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRESKSDAMALFPVLTPAVPYGNA 319
Query: 239 SYNVSTSTLRIMMDEFQRGHEIC---------EAMEKNEADVDWDTLFEPFTFFEAYKNY 289
+NV+ + LR + EF RGHEIC EA + W L EP FF +K Y
Sbjct: 320 CFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGIWSRLLEPVKFFGEHKYY 379
Query: 290 LRIDISAENADDLRN------------WKGWVESR------LRQLTLKIERHTYNM---- 327
L + +S +A+ + W G ESR +R + +++ Y
Sbjct: 380 LHVLVSCTDAEAYQGYVDAVESKIRFLWAGTAESRGYALENIRHVRIRLNPRRYEAPEEV 439
Query: 328 ----------------------LQCHPHPGDFSDKSKP--LYCSYFMGLQRKQGVPVGEG 363
+ H G D S P C YF+G+ P G
Sbjct: 440 ETRARLLKKTSRSSGGGNGSMEVSSHQTSGAVDDSSAPKIFSCHYFIGMSVDPKAPSG-- 497
Query: 364 EQFDIRLTVKEFKQAVSMYTLRKPGMQ----ISVAHVTRRNLPNFV 405
+ D+ +++ F V K G+ I+V +++ +P FV
Sbjct: 498 -KIDLAPSIRAFHGIVRQLRQYKEGITRLPVITVEDISK--IPVFV 540
>gi|226498102|ref|NP_001142239.1| uncharacterized protein LOC100274408 [Zea mays]
gi|194707762|gb|ACF87965.1| unknown [Zea mays]
Length = 430
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 124/347 (35%), Positives = 192/347 (55%), Gaps = 39/347 (11%)
Query: 12 LGYDKYSV--HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 69
L Y Y++ HGP +DID LC+GP AT + FF L Q+L PEV+E+H V A VP+
Sbjct: 23 LTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSEVHTVEKAKVPL 82
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
M+F+F+G+++DL YA+L + + ++ +LQ D ++ RSL+G RV +QI++LVP
Sbjct: 83 MRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVRVNEQIVQLVPN 142
Query: 130 ---------IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 180
+Q F+T LRC++ WA++RG++ + GF GI+ A+L A +C+ +P+A S
Sbjct: 143 AEFCFTGNTMQKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASVSG 202
Query: 181 LVSRFFRVYTQWRWPNPVLL------CAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 234
L + FF+ + W W PV L C EG LMPI+ P P
Sbjct: 203 LFAVFFQTFAHWPWQVPVSLHDELTTCLHSEG-----------------RLMPIVMPCTP 245
Query: 235 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 294
+ V+ +L+ + +E RG+ + + D W LFEPF + + Y+ +LRI +
Sbjct: 246 LEFCASTVTKGSLKKIREELTRGYVLTR--DPLRHDFQWSWLFEPFPYDQKYQQFLRIAL 303
Query: 295 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 341
A +L +W GWV+SR R L LK+ER ++C P P + D +
Sbjct: 304 RAPTIAELGDWAGWVKSRFRFLILKLERAG---IECDPCPSEEVDHT 347
>gi|414888168|tpg|DAA64182.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 430
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 124/347 (35%), Positives = 192/347 (55%), Gaps = 39/347 (11%)
Query: 12 LGYDKYSV--HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 69
L Y Y++ HGP +DID LC+GP AT + FF L Q+L PEV+E+H V A VP+
Sbjct: 23 LTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSEVHTVEKAKVPL 82
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
M+F+F+G+++DL YA+L + + ++ +LQ D ++ RSL+G RV +QI++LVP
Sbjct: 83 MRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVRVNEQIVQLVPN 142
Query: 130 ---------IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 180
+Q F+T LRC++ WA++RG++ + GF GI+ A+L A +C+ +P+A S
Sbjct: 143 AEFCFTGNTMQKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASVSG 202
Query: 181 LVSRFFRVYTQWRWPNPVLL------CAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 234
L + FF+ + W W PV L C EG LMPI+ P P
Sbjct: 203 LFAVFFQTFAHWPWQVPVSLHDELTTCLHSEG-----------------RLMPIVMPCTP 245
Query: 235 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 294
+ V+ +L+ + +E RG+ + + D W LFEPF + + Y+ +LRI +
Sbjct: 246 PEFCASTVTKGSLKKIREELTRGYVLTR--DPLRHDFQWSWLFEPFPYDQKYQQFLRIAL 303
Query: 295 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 341
A +L +W GWV+SR R L LK+ER ++C P P + D +
Sbjct: 304 RAPTIAELGDWAGWVKSRFRFLILKLERAG---IECDPCPSEEVDHT 347
>gi|226492962|ref|NP_001152292.1| LOC100285931 [Zea mays]
gi|195654767|gb|ACG46851.1| poly [Zea mays]
gi|238006566|gb|ACR34318.1| unknown [Zea mays]
gi|414866508|tpg|DAA45065.1| TPA: poly [Zea mays]
Length = 535
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/333 (36%), Positives = 187/333 (56%), Gaps = 15/333 (4%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
++ G +GP +DID LC+GP A+ + FF L QML PEV+ELH + A VP
Sbjct: 128 VLTFGSYALGAYGPESDIDVLCIGPCIASLQHHFFVVLRQMLEGRPEVSELHSIEGAKVP 187
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+M+FKF+G+ +D Y +L + E + +L+N D + R L+G R QI++LVP
Sbjct: 188 LMRFKFNGILVDFPYVQLPVINAAEAMHAFDPHVLENVDGPSWRCLSGVRANRQIIQLVP 247
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
++ F+ LRC++ WA++RG++ ++ GF GI+ A+L A +C+ +PNA + L+S FF +
Sbjct: 248 NMKKFQYLLRCLKLWARKRGLHCHLLGFFAGIHLAILAAYVCRRHPNASINTLLSLFFDI 307
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+ W WP PV L L P R P D LMPI+ P P S + + ST
Sbjct: 308 FVHWPWPLPVSL---------LDPPVPCRGP-DGCSLMPIMLPCIPPEFCSSSTTESTFS 357
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+ +E RG+ + + + D +W LF PF + YK +LRI +SA ++LR+W GW
Sbjct: 358 KIKEELWRGYALSK--DTRSTDFNWSWLFAPFPYGARYKCFLRIVLSAPMGEELRDWVGW 415
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 341
V+SR R L LK+E + C P P + D +
Sbjct: 416 VKSRFRNLLLKLESLG---VYCDPDPSEQVDHT 445
>gi|326437024|gb|EGD82594.1| hypothetical protein PTSG_03248 [Salpingoeca sp. ATCC 50818]
Length = 840
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/436 (33%), Positives = 216/436 (49%), Gaps = 40/436 (9%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH DID L P+ TR FF + L + +V +LH A VP
Sbjct: 77 IFTFGSFRLGVHSKNGDIDALICFPQSVTRAA-FFSSFYDALAQRDDVEDLHSAESAAVP 135
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+K F GV +DLL A+L I LD+S D IL+N E VRS+NG RVTD+IL L P
Sbjct: 136 AIKLTFGGVEMDLLMAQLPADSIAPSLDLSDDDILRNLPETCVRSINGRRVTDKILELCP 195
Query: 129 KI-QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
++F LR ++ WAKRRG+Y N ++GG++ A+LVA+ICQL+P A S LV +FF
Sbjct: 196 AAREDFGLCLRTIKLWAKRRGIYGNALCYVGGVHLAILVAKICQLFPYATASTLVEKFFW 255
Query: 188 VYTQWRWPNPVLLCAIEE-GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
Y +W W PV L +E+ G + W P N D +M I+TP YP N+SY V+ ST
Sbjct: 256 HYKRWDWAIPVELQHVEDLGITHIPHWSPINNYHD-MSVMKILTPVYPSQNASYTVTRST 314
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
L + E R + + + +A W L++ FF Y +Y+ + + D ++
Sbjct: 315 LYRIKRELDRAESVVQKIADGKA--TWPRLWKQIPFFGVYSHYICVQALTNSEQDRTLYE 372
Query: 307 GWVESRLRQLTLKIERH---TYNMLQCHPHPGDF---------------SDKSKPLYC-- 346
G VES +R L +E H TY + P P F + + P YC
Sbjct: 373 GLVESTVRNLVTSLEFHPAVTYAI----PIPKAFRRSPEKDPSTLEDEDTHERPPEYCWR 428
Query: 347 -SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNL 401
+F+GL EQ DI + +F++ V S T P M+ +V + R +
Sbjct: 429 TLWFIGLVFDPKA----TEQLDILTVMSDFERRVRFKESRMTRYDPSMRYTVDPMARDEI 484
Query: 402 PNFVFPGGVRPSRPSK 417
P ++ + ++P+K
Sbjct: 485 PTWLH-AEAKVAKPAK 499
>gi|428177976|gb|EKX46853.1| hypothetical protein GUITHDRAFT_162826 [Guillardia theta CCMP2712]
Length = 572
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 130/410 (31%), Positives = 214/410 (52%), Gaps = 30/410 (7%)
Query: 19 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 78
VH +DID LC+ P R E FF + L E+ +T + + DA PV+KF++ G
Sbjct: 112 VHSHDSDIDLLCIIPEVVNRSE-FFSRVPAKLAEVEGITCIKSLADAFAPVIKFQYCGFD 170
Query: 79 IDLLYARLSLWVIPEDLDISQD-SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 137
IDL R+ IP DL+I+ D +L+ D + + LNG RVT ++L+ VP I+NF+ L
Sbjct: 171 IDLGMVRMPCGSIPPDLNIALDRHLLRIEDTKDITCLNGPRVTYELLQRVPNIENFKVLL 230
Query: 138 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP 197
R ++ WA+RR +YS + GF GG+ W ++ A++ QLYP PS+L+ +FF +Y W++ +
Sbjct: 231 RAIKLWARRREIYSKIIGFPGGVAWGIMAAQVAQLYPKMCPSLLLEKFFHLYKHWKFEDA 290
Query: 198 VLLCAIEEGS-------LGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIM 250
+++ EE L WDP R + L +ITP YP NS++NV+ S L ++
Sbjct: 291 IIVAPPEECQAPDGQERYNLHAWDPTRRHFSRRPLT-VITPTYPMDNSTFNVTDSALNVI 349
Query: 251 MDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVE 310
+E R + + + + + E+ ++ LFEP FF+ Y +++I++ + + + G+VE
Sbjct: 350 RNEISRANSLTQGLAQGES--SYNDLFEPAMFFKQYGTFVQIEVLG-SEKHIEAFSGYVE 406
Query: 311 SRLRQLTLKIERHTYNMLQCHP-----------HPGDFSDKSKPLYCSYF-MGLQRKQGV 358
S++R+L K+ + HP H G + P +F +GL+ +
Sbjct: 407 SQIRKLVEKLTTSQLGLYIVHPCTRHFGPIPAEHLGGGDPEDGPWQNIFFYLGLKFDDNL 466
Query: 359 P---VGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 405
G+ D VKEF + ++ IS+ V RR LP +V
Sbjct: 467 VRHMKASGQSVDFTQPVKEF--LLGIHITDPTQTSISIKVVKRRALPEWV 514
>gi|413955904|gb|AFW88553.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
Length = 508
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 185/339 (54%), Gaps = 27/339 (7%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
++ G +GP +DID LC+GP A+ + FF L QML PEV+ELH + A VP
Sbjct: 128 VLTFGSYALGAYGPESDIDVLCIGPYIASLQHHFFVVLRQMLEGRPEVSELHSIEGAKVP 187
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+M+FKF+G+ +D Y +L + E + +L+N D + R L+G R QI++LVP
Sbjct: 188 LMRFKFNGILVDFPYVQLPVINAAEAMHAFDPHVLENVDGPSWRCLSGVRANRQIIQLVP 247
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
++ F+ LRC++ WA++RG+ ++ GF GI+ A+L A +C+ +PNA + L+S FF +
Sbjct: 248 NMKKFQYLLRCLKLWARKRGLDCHLLGFFAGIHLAILAAYVCRRHPNASINTLLSLFFDI 307
Query: 189 YTQWRWPNPV------LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 242
+ W WP PV +LC +G LMPI+ P P S +
Sbjct: 308 FVHWPWPLPVSLLDPPVLCGGPDGC----------------SLMPIMLPCIPPEFCSSST 351
Query: 243 STSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDL 302
+ ST + +E +RG+ + + + D DW LF PF + YK +LRI +SA D+L
Sbjct: 352 TESTFSKIKEELRRGYALSK--DTRSTDSDWSWLFAPFPYGARYKCFLRIVLSAPMEDEL 409
Query: 303 RNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 341
R+W GWV+SR R L LK+E + C P P D +
Sbjct: 410 RDWVGWVKSRFRNLLLKLESLG---VYCDPDPSKQVDHT 445
>gi|326508888|dbj|BAJ86837.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 116/324 (35%), Positives = 181/324 (55%), Gaps = 21/324 (6%)
Query: 2 PRYLPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHP 61
PR + ++ G HGP +DID LCVGP A FF L Q+L PEV+ L
Sbjct: 126 PRRVTATVLTYGSYTLGAHGPESDIDALCVGPCIANLPHHFFVVLRQILKCRPEVSGLQT 185
Query: 62 VPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTD 121
V +A VP+M+F+FSG+S+DL YA+L + + ++ S L+ D ++ +SL+G RV +
Sbjct: 186 VENAKVPLMRFRFSGISVDLTYAQLPVLDAVQAINTSSPQYLRRLDSRSWKSLSGVRVNE 245
Query: 122 QILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSML 181
QI++LVP + F+ LRC++ WA+RRG++ ++ G GI+ A+L A +CQ +PNA + L
Sbjct: 246 QIVQLVPNQEKFQILLRCIKLWARRRGLHCHLLGSFAGIHLAILAAYVCQRFPNATANGL 305
Query: 182 VSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH----LMPIITPAYPCMN 237
+ FF ++ W W PV D P + H LMPI+ P P
Sbjct: 306 FTMFFGIFAHWPWHIPV---------------DLHGQPTNCRHSDGCLMPIVMPCTPPEL 350
Query: 238 SSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAE 297
+ N++ T R + +E RG+ + + + + D +W +FEPF + Y +LRI + A
Sbjct: 351 CASNMTEGTFRKIREELMRGYVLTKDLGSH--DFEWAWIFEPFPYSTTYGQFLRIALCAP 408
Query: 298 NADDLRNWKGWVESRLRQLTLKIE 321
+++L +W GWV+SR L LK+E
Sbjct: 409 TSEELHDWIGWVKSRFPYLILKLE 432
>gi|62202042|gb|AAH92668.1| Papolb protein [Danio rerio]
Length = 283
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/183 (54%), Positives = 131/183 (71%), Gaps = 1/183 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF ++ L E EV +L V +A VP
Sbjct: 96 IFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEKLKEQEEVKDLRAVEEAFVP 154
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 155 VIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNAV + LV +FF V
Sbjct: 215 NIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLV 274
Query: 189 YTQ 191
+++
Sbjct: 275 FSK 277
>gi|340054738|emb|CCC49040.1| putative poly(A) polymerase [Trypanosoma vivax Y486]
Length = 671
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 178/345 (51%), Gaps = 25/345 (7%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G +Y+VH G+DID + + P TRE FF L L+ VTELH + DA VP
Sbjct: 84 IFATGSYRYNVHASGSDIDIVLIAPNRITREH-FFDTLAPRLSHEARVTELHCIRDARVP 142
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ G+ IDL + + +PE + D +L+ D+Q+V S N RV I+ LVP
Sbjct: 143 LIAMVVDGIDIDLSFGSIRQDRVPE---VITDDLLRGLDDQSVLSCNAVRVAHNIMDLVP 199
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+FR LR ++ W K RG+YSN GF GI WA+LVA + Q +PN + +V RFFR+
Sbjct: 200 HKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVAFVSQCHPNQNAAGMVVRFFRI 259
Query: 189 YTQWRWPNP---------VLLCAIE--EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMN 237
Y W PNP + L + SLG + WDPR + D L P++TPA P N
Sbjct: 260 YHSWFSPNPHESGKENRAIYLTETMRVKTSLG-RCWDPRESKSDALALFPVLTPAVPYGN 318
Query: 238 SSYNVSTSTLRIMMDEFQRGHEICEA---MEKNEADVD------WDTLFEPFTFFEAYKN 288
+ YNV+ + LR + EF RGHEIC + M N+ W+ + EP F Y+
Sbjct: 319 ACYNVTITNLRQLCSEFARGHEICSSCIGMSVNDTRTKFGKYGLWNKILEPVKVFGEYRY 378
Query: 289 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH 333
YL I I+ + + + + VES++R L L+ + H
Sbjct: 379 YLHIQITCTDPEAYQGYVDAVESKIRFLWAGTAESRAQSLESYKH 423
>gi|51900536|gb|AAU13916.1| PAP alpha [Candida dubliniensis]
Length = 360
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 146/214 (68%), Gaps = 4/214 (1%)
Query: 126 LVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRF 185
LVPK F+ LRC++ WA++R VY N+ GF GG+ WA+LVARICQLYPNAV S++V +F
Sbjct: 1 LVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSSVIVEKF 60
Query: 186 FRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
F +YT+W WP PVLL +IE+G L ++VW+PR P D+ H MP+ITPAYP M +++N+++S
Sbjct: 61 FNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCATHNITSS 120
Query: 246 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-RIDISAENADDLRN 304
T ++++ E RG I + + + W LFE FF YK YL + + ++A++ +
Sbjct: 121 TQKVILAELSRGSSIMQDIHAGKK--SWSDLFEKHCFFYKYKFYLCVVAATIDSAEEHKK 178
Query: 305 WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 338
W G++ES+LRQL LK+E + HP+ DFS
Sbjct: 179 WSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFS 211
>gi|428177975|gb|EKX46852.1| hypothetical protein GUITHDRAFT_94125 [Guillardia theta CCMP2712]
Length = 613
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 186/322 (57%), Gaps = 13/322 (4%)
Query: 19 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 78
VH +DID LC+ P R E FF + L E+ +T + + DA VPV+KF++ G
Sbjct: 112 VHSHDSDIDLLCIIPEVVNRSE-FFSRVPAKLAEVEGITCIKSLADAFVPVIKFQYCGFD 170
Query: 79 IDLLYARLSLWVIPEDLDISQD-SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 137
IDL R+ IP DL+I+ D +L+ D + + LNG RVT ++L+ VP I+NF+ L
Sbjct: 171 IDLGMVRMPCGSIPPDLNIALDRHLLRIEDTKDITCLNGPRVTYELLQRVPNIENFKVLL 230
Query: 138 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP 197
R ++ WA+RR +YSN+ GF GG+ W ++ A++ QLYP PS+L+ +FF +Y W++ +
Sbjct: 231 RAIKLWARRREIYSNIIGFPGGVAWGIMAAQVAQLYPKMCPSLLLEKFFFLYKHWKFEDA 290
Query: 198 VLLCAIEEGS-------LGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIM 250
+++ EE L WDP R+ + L +ITP YP NS++N++ S L ++
Sbjct: 291 IIVAPPEECQAPDGQERYNLHSWDPTRHHFSRRPLT-VITPTYPMANSTFNITDSALNVI 349
Query: 251 MDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVE 310
+E R + + + + + E+ ++ LFEP FF+ Y +++I++ + + + G+VE
Sbjct: 350 RNEISRANSLTQGLAQGES--SYNDLFEPAMFFKQYGTFVQIEVLG-SEKHIEAFSGYVE 406
Query: 311 SRLRQLTLKIERHTYNMLQCHP 332
S++R+L K+ + HP
Sbjct: 407 SQIRKLVEKLTTSQLGLYIVHP 428
>gi|426246819|ref|XP_004017185.1| PREDICTED: poly(A) polymerase alpha-like, partial [Ovis aries]
Length = 244
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/193 (55%), Positives = 137/193 (70%), Gaps = 2/193 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 26 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 84
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 85 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 144
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 145 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 204
Query: 189 YTQWRW-PNPVLL 200
+++W+W P PVLL
Sbjct: 205 FSKWQWHPTPVLL 217
>gi|294895248|ref|XP_002775109.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239881038|gb|EER06925.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 413
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 136/212 (64%), Gaps = 5/212 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + + P +DID LCV PRH TRE FFG L L +M EV + PVPDA+ P
Sbjct: 95 LFTFGSHRLGLISPSSDIDCLCVAPRHVTREA-FFGSLVGKLQQMDEVETVTPVPDAYAP 153
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K GV IDLL+ARL+L D+ D +L+N D+++VR +NG RV D IL+LVP
Sbjct: 154 IIKLVCCGVDIDLLFARLNLTSTSGLKDLQSDELLKNLDDRSVRCVNGTRVADLILKLVP 213
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
FR LR ++ WAKRRG+Y+N+ GF GGI WA+LVAR+CQ++PN LV RFF +
Sbjct: 214 TPNTFRGCLRLIKLWAKRRGLYANIIGFFGGITWAILVARVCQMFPNMQSVQLVRRFFLI 273
Query: 189 YTQWRWPNPVLLCAI----EEGSLGLQVWDPR 216
++W W NPV LC I E G + +VW+P+
Sbjct: 274 LSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPK 305
>gi|301100486|ref|XP_002899333.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262104250|gb|EEY62302.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 990
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/254 (44%), Positives = 165/254 (64%), Gaps = 1/254 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + + P +DID +CV P H T +DFFG Q+L + P V+ L PV A+VP
Sbjct: 482 LFLAGSYRLGLDDPNSDIDAVCVAPWHVT-HDDFFGSFCQLLAQTPGVSHLAPVRSAYVP 540
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ F GV +DLL++RL + + + +I D +L E ++++LN RV+ +L LVP
Sbjct: 541 LISLSFLGVRMDLLFSRLPMSSVESNQNIDSDHMLVGVHETSMKALNAPRVSSMLLCLVP 600
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ + +R LR +R WA+RRG+YS G+LGGI+WA+LVA +CQLYPNA P+ + RFF+V
Sbjct: 601 RRREYRIVLRAVRAWARRRGIYSAKLGYLGGISWAILVAFVCQLYPNAEPAKIFVRFFQV 660
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++W+WP PV+L I + LG +WDPR++ D+ H+MPIITPAYP MNSS VS S+
Sbjct: 661 LSEWQWPQPVMLNMIYDAGLGFDMWDPRQSVFDRSHIMPIITPAYPHMNSSVQVSQSSFS 720
Query: 249 IMMDEFQRGHEICE 262
++ +E R + E
Sbjct: 721 VIYEELWRARYLAE 734
>gi|119620437|gb|EAX00032.1| poly(A) polymerase gamma, isoform CRA_d [Homo sapiens]
Length = 430
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/260 (41%), Positives = 158/260 (60%), Gaps = 13/260 (5%)
Query: 155 GFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWD 214
GFLGG++WA+LVAR CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWD
Sbjct: 3 GFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWD 62
Query: 215 PRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWD 274
PR NP D+YHLMPIITPAYP NS+YNVSTST +M++EF++G + + + + ++ DW
Sbjct: 63 PRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWS 120
Query: 275 TLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP 334
L EP FF+ Y++Y+ + SA ++ W G VES++R L +ER+ + L H +P
Sbjct: 121 KLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNP 179
Query: 335 GDF-----SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLR 385
F K +F+G+ ++ V E D+ ++ F V + +
Sbjct: 180 QSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINML 238
Query: 386 KPGMQISVAHVTRRNLPNFV 405
K GM+I HV ++ L +++
Sbjct: 239 KEGMKIEATHVKKKQLHHYL 258
>gi|440493736|gb|ELQ76169.1| Poly(A) polymerase, nucleotidyltransferase [Trachipleistophora
hominis]
Length = 696
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/375 (34%), Positives = 203/375 (54%), Gaps = 53/375 (14%)
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
P + K + IDL++ARL+L+ I L++ S+L+N DE++V SLNG RVTD+IL LV
Sbjct: 316 PGLNKKMVEIKIDLVFARLNLFKIDGSLNLLDSSLLKNLDEKSVLSLNGNRVTDEILSLV 375
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P F LRC+++WAKRR + ++ G+ GG+ +A+ VARICQL+PN ++ ++F
Sbjct: 376 PNKTVFHGALRCIKYWAKRRALTGHLYGYFGGVAYAISVARICQLFPNVCEYTIICKYFE 435
Query: 188 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
+Y +W+WP PV+L IE + L+VWDP+ +P DK+H MP+ITP+YP M S++N+ ST+
Sbjct: 436 LYKEWKWPMPVMLKKIENLNYNLKVWDPKIHPSDKFHKMPVITPSYPSMCSTHNIMNSTM 495
Query: 248 RIMMDEFQRGHE-ICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA-----DD 301
+ +E +R H+ + E E W+ F FF+ Y+++L + I +NA +D
Sbjct: 496 KRYKEELERAHKLLVEGAE-------WNEFFRGTDFFQRYRSFLAVFILLKNAGCTTNND 548
Query: 302 LRN--------------------WKGWVESRLRQLTLKIERHTYNMLQCHP--------- 332
R+ W+G V SR+R L+ K+E T L P
Sbjct: 549 ARSEQEITNEQASGAKETSMHKMWQGHVNSRIRFLSTKLE--TVEQLDSAPPFPQTFDMC 606
Query: 333 -----HPGDFSDKSKPLYCSY-FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRK 386
HP F K+ CS F+ L + + F I ++EFK+ V + R
Sbjct: 607 GFLGLHPLAFIPKNA--LCSLTFIALDMADSKQLLRKKVF-IDAPIEEFKEMVFDWDKRT 663
Query: 387 PGMQISVAHVTRRNL 401
M + + + R+++
Sbjct: 664 EDMDLVMRAMKRKDV 678
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH G+DIDTLCV P + R+E FF E + ML ++ E+ V DA+VP+M+
Sbjct: 89 FGSYRLGVHARGSDIDTLCVAPVYVDRKE-FFEEFYVMLNDV--FAEVEKVEDAYVPLMQ 145
Query: 72 FKF 74
+
Sbjct: 146 LVY 148
>gi|170036999|ref|XP_001846348.1| poly a polymerase [Culex quinquefasciatus]
gi|167879976|gb|EDS43359.1| poly a polymerase [Culex quinquefasciatus]
Length = 531
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 166/289 (57%), Gaps = 30/289 (10%)
Query: 1 MPRYLPLVLIG----LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEV 56
MP L L G G + SV+ G +ID LC PR+ R+ D+FG ++L + PEV
Sbjct: 66 MPEVLAEKLGGKIYTFGSYRLSVNHKGTNIDALCEAPRNIERQ-DYFGSFFELLKKQPEV 124
Query: 57 TELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNG 116
T V +A VPV+ F G+ IDLL+ARL+L IP++ D+ +D +L+N D + V
Sbjct: 125 TGCRAVEEALVPVINMNFDGIKIDLLFARLALKEIPDNFDLREDMLLKNLDPKLVER--- 181
Query: 117 CRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA 176
VP R R G+YSN G+ GG++W +LVAR CQL PN
Sbjct: 182 ----------VP---------RHRRDPTAEHGIYSNSLGYFGGVSWGMLVARTCQL-PNV 221
Query: 177 VPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCM 236
+ + V +FF V+ +W+WP PV L + +LG QVWD R N +D++HLM IITPAYP
Sbjct: 222 IAATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMSIITPAYPQQ 281
Query: 237 NSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 285
NS+++VS+ST ++M++EF +I + + +A WD LFE ++ E+
Sbjct: 282 NSTFHVSSSTRKVMLNEFNSDMQITDEIMLGKA--GWDKLFEAPSWSES 328
>gi|242212591|ref|XP_002472128.1| predicted protein [Postia placenta Mad-698-R]
gi|220728772|gb|EED82659.1| predicted protein [Postia placenta Mad-698-R]
Length = 438
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 176/354 (49%), Gaps = 84/354 (23%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VHGPG+DIDTLCV P+H +RE DFF + +ML V E VPDA+VP
Sbjct: 55 IFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DFFEDFEEMLKATEGVDEASAVPDAYVP 113
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++K K SG+ IDLL ARL+L IP+ L + D+ +R+L+
Sbjct: 114 IIKTKISGIPIDLLMARLALSSIPDTLTLQ--------DDNLLRNLDE------------ 153
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
RC LYPNA+ +VSRFF +
Sbjct: 154 ---------RC--------------------------------LYPNAIAGAIVSRFFII 172
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
QW WP PVLL IEEG L ++VW+P+ P D+ H MPIITPAYP M +++NV+ ST
Sbjct: 173 MYQWTWPQPVLLKQIEEGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATHNVTASTQM 232
Query: 249 IMMDEFQRGH----------------EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 292
IM +EF++G EI + + A DW LF FF Y+ YL++
Sbjct: 233 IMTEEFKKGQLEFYSPGRYLLFLAGSEIVDRVIVGSA--DWSELFSKHDFFHKYRYYLQV 290
Query: 293 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 346
S +++ W G VESR+RQL +K+E + ++ HP F + L+C
Sbjct: 291 IASTGSSELQIKWAGTVESRIRQLVMKLE-YVDSLTLAHPFIKGF---EQVLHC 340
>gi|429964357|gb|ELA46355.1| hypothetical protein VCUG_02160 [Vavraia culicis 'floridensis']
Length = 708
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 126/388 (32%), Positives = 199/388 (51%), Gaps = 74/388 (19%)
Query: 77 VSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTT 136
+ IDL++ARL+++ I L++ S+L+N DE++V SLNG RVTD+IL LVP + F
Sbjct: 314 IKIDLVFARLNVFKIDSSLNLLDSSLLKNLDEKSVLSLNGNRVTDEILSLVPNKKVFHGA 373
Query: 137 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN 196
LRC+++WAKRRG+ ++ G+ GG+ +A+ VARICQL+PN ++ ++F +Y +W+WP
Sbjct: 374 LRCIKYWAKRRGLTGHLYGYFGGVAYAISVARICQLFPNMCEYTMICKYFELYKEWKWPT 433
Query: 197 PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 256
PV+L IE + L+VWDP+ +P DK+H MP+ITP+YP M S++N+ ST++ +E +R
Sbjct: 434 PVMLKKIENLNYNLKVWDPKIHPSDKFHKMPVITPSYPSMCSTHNIINSTMKRYKEELER 493
Query: 257 GHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-------------------------- 290
GH + + +W F FF+ YK++L
Sbjct: 494 GHRLLAEGK------EWKEFFRSTDFFQRYKSFLAVFILLKRKRAGDAICGANTKDGASR 547
Query: 291 ----------------------RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML 328
R D SA+ A + W+G V SR+R L+ K+E T L
Sbjct: 548 RFVNEKEQKSGMQTSNTNVAGVRDDESAKEASLHKMWQGHVNSRIRFLSTKLE--TVEQL 605
Query: 329 QCHP--------------HPGDFSDKSKPLYCSY-FMGLQRKQGVPVGEGEQFDIRLTVK 373
P H DF K+ CS F+ L + + F I ++
Sbjct: 606 DSAPPFPQTFDICDFSVCHRLDFIPKNS--LCSVTFIALDMADSKQLLRKKIF-IDAPIE 662
Query: 374 EFKQAVSMYTLRKPGMQISVAHVTRRNL 401
EFK+ V + R M + + + R+++
Sbjct: 663 EFKEMVFDWDRRTEDMDLVMRAMKRKDV 690
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH G+DIDTLCV P + R+E FF E + ML+++ E+ V DA+VP+M+
Sbjct: 89 FGSYRLGVHARGSDIDTLCVAPVYVDRKE-FFEEFYSMLSDV--FAEVEKVEDAYVPLMQ 145
Query: 72 FKFSGVSID 80
+ ID
Sbjct: 146 LVYREHRID 154
>gi|308472139|ref|XP_003098298.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
gi|308269146|gb|EFP13099.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
Length = 343
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 202/392 (51%), Gaps = 56/392 (14%)
Query: 74 FSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNF 133
+SG+ +D+L+ARL IPE++D+S DS+L N DE ++RSLNG RV +Q+L+LVP F
Sbjct: 3 YSGIELDVLFARLDKPTIPENIDLSDDSLLVNLDESSIRSLNGIRVAEQLLKLVPNRDTF 62
Query: 134 RTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWR 193
+LR ++ WAK GVYSN GF GGI WA+LVA+ CQLYPNA PS ++ + F V++ W+
Sbjct: 63 CQSLRAIKLWAKNHGVYSNAMGFFGGITWAILVAKTCQLYPNAAPSKIIQKVFFVFSTWK 122
Query: 194 WPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 253
WP+PV+L + C++S STL I+ +E
Sbjct: 123 WPSPVVL------------------------------KQFGCVDSKLANLKSTLHIIQEE 152
Query: 254 FQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 313
+ EIC+ ++K A W+ LFE FF YK+++ + I+ + G+ ES++
Sbjct: 153 MKSALEICDQIQKGNA--TWNDLFEEINFFSRYKHFVALTINEDTN------IGFFESKI 204
Query: 314 RQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVK 373
RQL IER++ + H +P + ++F+GL+ + + D+ ++
Sbjct: 205 RQLVQIIERNS-QVKTAHINPRKLKNIRNE--STWFLGLEFTEN-----AKNLDLTSEIE 256
Query: 374 EFKQAVSMYTLRKPG----MQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERK 429
FK+ +M + G +Q+ +V R +L F+ G ++ R K S+ A RK
Sbjct: 257 GFKR--NMARQQSKGIVGQIQLDATYVKRSDLIKFISLGDLKRGRFVK----SKTAANRK 310
Query: 430 VSSHTKPGADDGRKRKQTDDNVDTHLRNAKCH 461
+ + + + R VD+ L K +
Sbjct: 311 RPASSGDSTETKKPRVIDMSAVDSMLLKLKSN 342
>gi|349602954|gb|AEP98933.1| Poly(A) polymerase alpha-like protein, partial [Equus caballus]
Length = 279
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/184 (55%), Positives = 130/184 (70%), Gaps = 1/184 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQW 192
+++W
Sbjct: 276 FSKW 279
>gi|354681991|ref|NP_001238935.1| poly(A) polymerase alpha isoform 2 [Homo sapiens]
gi|441666293|ref|XP_004091880.1| PREDICTED: poly(A) polymerase alpha-like [Nomascus leucogenys]
gi|12654217|gb|AAH00927.1| PAPOLA protein [Homo sapiens]
gi|28375483|emb|CAD66560.1| unnamed protein product [Homo sapiens]
gi|119602051|gb|EAW81645.1| poly(A) polymerase alpha, isoform CRA_c [Homo sapiens]
Length = 285
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/184 (55%), Positives = 130/184 (70%), Gaps = 1/184 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQW 192
+++W
Sbjct: 276 FSKW 279
>gi|1377870|gb|AAC52608.1| poly(A) polymerase VI [Mus musculus]
gi|149044214|gb|EDL97596.1| poly (A) polymerase alpha (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 293
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/184 (55%), Positives = 130/184 (70%), Gaps = 1/184 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 215
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 216 NIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 275
Query: 189 YTQW 192
+++W
Sbjct: 276 FSKW 279
>gi|402697301|gb|AFQ90838.1| polyA polymerase alpha, partial [Dendropicos gabonensis]
Length = 170
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/170 (58%), Positives = 127/170 (74%), Gaps = 1/170 (0%)
Query: 23 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 82
GADID LCV PRH R DFF ++ L + EV +L V +A VPV+K F G+ ID+L
Sbjct: 2 GADIDALCVAPRHVERS-DFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDIL 60
Query: 83 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 142
+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++
Sbjct: 61 FARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKL 120
Query: 143 WAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 121 WAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|224088990|ref|XP_002308592.1| predicted protein [Populus trichocarpa]
gi|222854568|gb|EEE92115.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 94/146 (64%), Positives = 112/146 (76%), Gaps = 1/146 (0%)
Query: 273 WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP 332
W LFEP+ FFEAYKNYL++DI A +A DL WKGWVESRLRQLTLKIER T MLQCHP
Sbjct: 218 WSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLTLKIERDTDGMLQCHP 277
Query: 333 HPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQI 391
+P ++ D SK +C++FMGLQRK+GV EG+QFDIR TV EF+Q ++MY KPGM I
Sbjct: 278 YPNEYIDPSKQCAHCAFFMGLQRKEGVTGQEGQQFDIRGTVDEFRQDINMYLPWKPGMDI 337
Query: 392 SVAHVTRRNLPNFVFPGGVRPSRPSK 417
V+HV RR LP FVFP G + SRPS+
Sbjct: 338 YVSHVRRRQLPGFVFPDGYKRSRPSR 363
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 69/124 (55%), Gaps = 35/124 (28%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
V+ G + VHGPGADIDTLCVGP + RE L EM EVTEL PVPDAHV
Sbjct: 78 VIFTFGSYRLGVHGPGADIDTLCVGPSYVNRE----------LAEMEEVTELQPVPDAHV 127
Query: 68 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
P DLDIS S+L DEQTVRSLNGCRV DQIL+LV
Sbjct: 128 P-------------------------DLDISNGSVLYEVDEQTVRSLNGCRVADQILKLV 162
Query: 128 PKIQ 131
P ++
Sbjct: 163 PNVE 166
>gi|440789895|gb|ELR11186.1| Poly(A) polymerase central domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1230
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 184/356 (51%), Gaps = 45/356 (12%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 67
VL LG + V +D+D LCVGP + FF EL L + ++ V DA V
Sbjct: 777 VLHLLGSCQMGVQTADSDVDALCVGPDTMSCSR-FFMELRVALEKTKKLQSAREVHDAKV 835
Query: 68 PVMKFKFSGVSIDLLYARLSLWVI---PEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 124
PV+K + +GV +DLLY V P +D D L+ + +RS++GCR D IL
Sbjct: 836 PVLKLQINGVEVDLLYGPYPSSVPITPPSQID---DRSLRKFEPAVLRSISGCRDGDAIL 892
Query: 125 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC---QLYPN------ 175
R VP + +F+T LR ++ WAKRRG+YSN GFLGG +W++LVA +C +LY
Sbjct: 893 RSVPNVSHFQTVLRAVKLWAKRRGLYSNAVGFLGGFSWSVLVAYVCKNSKLYAKSAAAAS 952
Query: 176 -----AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 230
++ L++ FF VY W W PV AI GS R P K MPI+T
Sbjct: 953 GDGDLSIEERLLAEFFEVYNHWDWQQPV---AITPGSA-------RYKPGHKSDKMPIVT 1002
Query: 231 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 290
P P NS+ NV+ STL M EF R +I +A + N ++ + L +P FF+ Y YL
Sbjct: 1003 PTPPFNNSARNVARSTLTEMQQEFFRAFDITQASQWN-SEAGLNDLLQPTNFFKDYHYYL 1061
Query: 291 RIDISAENADDLRNWK-------GWVESRLRQLTLKIER--HTYNMLQCHPHPGDF 337
+++ + ++D++ W GW+ESRL L +E+ TY P PG F
Sbjct: 1062 MVEVHSLSSDEVTKWPTNFSLSLGWLESRLIALIFDLEKNPQTY----ARPFPGTF 1113
>gi|340546035|gb|AEK51816.1| poly(A) polymerase alpha [Heteronotia binoei]
Length = 170
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 99/170 (58%), Positives = 126/170 (74%), Gaps = 1/170 (0%)
Query: 23 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 82
GADID LCV PRH R DFF ++ L EV +L V +A VPV+K F G+ ID+L
Sbjct: 2 GADIDALCVAPRHVDRS-DFFTSFYEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDIL 60
Query: 83 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 142
+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++
Sbjct: 61 FARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKL 120
Query: 143 WAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 121 WAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|402697299|gb|AFQ90837.1| polyA polymerase alpha, partial [Cyrtodactylus sp. JJF-2012]
Length = 170
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/170 (58%), Positives = 126/170 (74%), Gaps = 1/170 (0%)
Query: 23 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 82
GADID LCV PRH R DFF ++ L EV +L V +A VPV+K F G+ ID+L
Sbjct: 2 GADIDALCVAPRHVDRS-DFFTSXYEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDIL 60
Query: 83 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 142
+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++
Sbjct: 61 FARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKL 120
Query: 143 WAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 121 WAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|294943027|ref|XP_002783739.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239896395|gb|EER15535.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 274
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/271 (42%), Positives = 163/271 (60%), Gaps = 20/271 (7%)
Query: 41 DFFGELHQM-LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQ 99
D F EL + L+E+ +VT L+PVP A VPV+K KF GV +D+LY L+ + +D +
Sbjct: 4 DAFFELFPLKLSELNDVTNLNPVPQAAVPVIKMKFMGVDVDVLYCGLAHPLSGPAIDPAD 63
Query: 100 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 159
D++L DE++ RS+NG RV+D I VP +F LR +R WA+RRG+YSN G+LGG
Sbjct: 64 DNLLCGMDEKSARSINGVRVSDAIKTCVPHFAHFLGALRVIRAWARRRGIYSNALGYLGG 123
Query: 160 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRW---PNPVLLCAIE----EGSLGLQV 212
++WA+LVAR+CQL+PN PS LV RFFRVY++W W V+L E EG +V
Sbjct: 124 VSWAILVARVCQLFPNMGPSQLVVRFFRVYSRWNWDPSEGAVVLRHSEQRNGEGFQHHKV 183
Query: 213 W--DPRRNPKDK-----YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAME 265
W P+R D+ M +ITPAYP MNS++ V+ ++ + E +RG I +
Sbjct: 184 WCPPPKRTTTDQPLPLAASPMAVITPAYPSMNSTFGVTRMSMDTIKKELERGAGIISSKG 243
Query: 266 KNEADVD-WDTLFEPFTFFE----AYKNYLR 291
+ + W+TL EP FF+ YK +L+
Sbjct: 244 VDLRSRECWETLLEPIHFFDYDQGGYKQFLQ 274
>gi|391331065|ref|XP_003739971.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 493
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/285 (38%), Positives = 174/285 (61%), Gaps = 16/285 (5%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP-EVTELHPVPDAHVPVM 70
G + V +DID V PR TREE FF +ML + E+T+L +P A+VPV+
Sbjct: 96 FGSLRLGVQDFYSDIDLCFVAPRWVTREE-FFTGFPRMLEQYSHEITKLSVLPSAYVPVI 154
Query: 71 KFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN--ADEQTVRSLNGCRVTDQILRLVP 128
+ + +D+++AR + I +LD+ + +++ +D + VRSLNG RVT+ +LR VP
Sbjct: 155 RATCHDIQVDIVFARTEVDEISRELDLLAGANIESLISDIRCVRSLNGYRVTEMVLRFVP 214
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ + F+ L+ +R+WAK + +YS+ G+LGG++WA+LVA++C ++P A + ++++FF V
Sbjct: 215 RYRVFQLALKAIRYWAKCQKIYSHTLGYLGGVSWAILVAKVCTMFPKAGAARILNKFFLV 274
Query: 189 YTQWRWPNPVLLCAIEEG-SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
+QWRWP PV+L + EG + Q+W + P D +MPIITP YP NSS+NVS STL
Sbjct: 275 MSQWRWPEPVML--LPEGYGVSSQLWSITQMPWD---IMPIITPVYPQQNSSFNVSKSTL 329
Query: 248 RIMMDEFQRGHEICE--AMEKNEADVDWDTLFEPFTFFEAYKNYL 290
+M + G I + ME+ DW + F P + Y++Y+
Sbjct: 330 LVMKNALTEGVRITDDILMER----CDWKSFFHPVHIADMYEHYV 370
>gi|145505515|ref|XP_001438724.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405896|emb|CAK71327.1| unnamed protein product [Paramecium tetraurelia]
Length = 487
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 210/383 (54%), Gaps = 34/383 (8%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G ++ +G +DID + + P RE FF +L +L+ +VT L+ + +A VP
Sbjct: 86 LAVFGSYRFGANGKDSDIDLIILAPPQIDRELHFFQQLPSILSSNSKVTNLYCIQEAMVP 145
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+++FKF+G+ DL++A + + P +SQ DE++ RSLNG +V+D +
Sbjct: 146 LIRFKFAGIQFDLVFACVKKIMKP----LSQSD---PVDEKSSRSLNGLKVSDYFSKYCH 198
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ +++ + L+ ++ WA RG+Y NV G+LGGI+W +L +I QLYPN L+ RFF +
Sbjct: 199 Q-KSYLSFLKFIKAWAINRGIYGNVMGYLGGISWQILTHKIFQLYPNYSVQGLIERFFFI 257
Query: 189 YTQWRWPN-PVLLCAIEEGSLGLQVWDPR--RNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
++QW+W PV++ +E +W + ++++M I+TP YP +NS+YNVS
Sbjct: 258 FSQWKWNELPVVIQKCDE------IWRNSLFEQQQKQHNVMSILTPVYPYINSAYNVSNC 311
Query: 246 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNW 305
T I+ ++ + + I + + +E + W L + FF+ Y YL+I ++N DDL W
Sbjct: 312 TFTIIEEQLKLANIIMQKICLSE--LQWSDLLKKIQFFDIYYTYLQIRALSKNKDDLIQW 369
Query: 306 KGWVESRLRQLTLKIERHTYN-MLQCHPHP---------GDFSDKSKPLYC---SYFMGL 352
K +ES+LR+L ++ N ++ H +P GD +D L+ S+F G+
Sbjct: 370 KSHIESKLRKLNKMLDEGDVNKAIEFHLYPKSFQTDYVQGDENDTPGSLFNFSESFFYGI 429
Query: 353 QRKQGVPVGEGEQFDIRLTVKEF 375
+ K V E+ DI +++F
Sbjct: 430 RIKDEELV--KEKLDIENIIRQF 450
>gi|355709238|gb|AES03525.1| poly polymerase alpha [Mustela putorius furo]
Length = 275
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/183 (54%), Positives = 127/183 (69%), Gaps = 1/183 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 94 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 152
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 153 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 212
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I NFR TLR ++ WA +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V
Sbjct: 213 NIDNFRLTLRAIKLWAXXHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLV 272
Query: 189 YTQ 191
+++
Sbjct: 273 FSK 275
>gi|218200293|gb|EEC82720.1| hypothetical protein OsI_27407 [Oryza sativa Indica Group]
Length = 455
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 166/312 (53%), Gaps = 42/312 (13%)
Query: 12 LGYDKYSV--HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 69
L Y Y++ HGP +DID LCVGP AT + FF L Q+L + PEV+EL V A
Sbjct: 77 LTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVSELQTVESA---- 132
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+ + S +LQ D ++ RSL+G RV +QI++LVP
Sbjct: 133 -----------------------KAIITSNPHLLQKLDSRSWRSLSGVRVNEQIVQLVPN 169
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
Q F+ LRC++ WAKRRG++ ++ GF GI+ A+L A +CQ YP + L + FF ++
Sbjct: 170 AQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGTINGLFTIFFDIF 229
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
W W PV SL Q + RR P + MPI+ P P + N++ T +
Sbjct: 230 AHWNWQIPV--------SLHGQPTNCRR-PDGSF--MPILLPCTPPEFCTSNMTKGTFKK 278
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 309
+ +E RG+ + + E D +W LF PF + Y+ +LRI + A +++LR+W GWV
Sbjct: 279 IREELMRGYALTK--EPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELRDWAGWV 336
Query: 310 ESRLRQLTLKIE 321
+SR R L LK+E
Sbjct: 337 KSRFRNLILKLE 348
>gi|405977000|gb|EKC41473.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 264
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 125/174 (71%), Gaps = 1/174 (0%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + H GADIDT+C+ P H R DFF ++L PEV +L + +A+VP++K
Sbjct: 91 FGSYRLGAHTKGADIDTVCIAPGHVDRS-DFFSSFVEVLKHTPEVKDLRAIEEAYVPLIK 149
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ +D+++ARL+L IP+++D+ +S+L++ + + VRSLNGCRVTD+IL LVP
Sbjct: 150 MTFDGIELDMVFARLTLPQIPDEIDLRDESLLRHLNTKCVRSLNGCRVTDEILHLVPNQH 209
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRF 185
NFR TL ++ WAK++G+YS V GFLGG++WA+LVAR+CQLYPNA P+ L+ +F
Sbjct: 210 NFRRTLLAIKIWAKKKGIYSKVLGFLGGVSWAILVARVCQLYPNAAPATLLHKF 263
>gi|222624807|gb|EEE58939.1| hypothetical protein OsJ_10608 [Oryza sativa Japonica Group]
Length = 519
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 180/333 (54%), Gaps = 43/333 (12%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
++ G +GP +DID +CVGP A+ + FF L QML E PEV++LH + +A
Sbjct: 137 VLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVSDLHSIENAK-- 194
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+I RL L +E + R L+G RV QI++L+P
Sbjct: 195 ---------AIHAFDPRL----------------LAAVNEPSWRCLSGVRVNRQIMQLLP 229
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I+ F+ LRC++ WA++RG++ ++ GF GI+ A+L A +C ++P+A S L + FF +
Sbjct: 230 NIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHATLSSLFNSFFDI 289
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++ W WP PV L +++ + W P MPI+ P P + +++ ST
Sbjct: 290 FSHWHWPLPVSL--LDQPT----PWRPH-----CCSFMPIVMPCSPPEFCASSITRSTFN 338
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+ +E QRG + + ++N D++W LF PF + YK++LRI +SA A++LR+W GW
Sbjct: 339 KIKEELQRGFALTKG-DRN-GDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELRDWVGW 396
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 341
V+SR R L LK+E + C P P + +D S
Sbjct: 397 VKSRFRNLLLKLESIG---VDCDPDPSEQADHS 426
>gi|116207486|ref|XP_001229552.1| hypothetical protein CHGG_03036 [Chaetomium globosum CBS 148.51]
gi|88183633|gb|EAQ91101.1| hypothetical protein CHGG_03036 [Chaetomium globosum CBS 148.51]
Length = 592
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 147/212 (69%), Gaps = 9/212 (4%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPV 69
G + V+GPG+D+DTL V P++ T E+ +F ++L EM +T+L PVP+A VP+
Sbjct: 88 GSYRLGVYGPGSDMDTLVVAPKYVTVEQ-YFEIFPEVLVEMAPPGAITDLTPVPEAFVPI 146
Query: 70 MKFKFSGVSIDLLYARL-SLWVIPEDLD--ISQDSILQNADEQTVRSLNGCRVTDQILRL 126
+KF+FSG+SIDL++ + +L +P++ + ++ +++L+ E VRSLNG RVTD IL L
Sbjct: 147 IKFEFSGISIDLIFCSIQTLKQLPDEKNWSLADNNLLRGLSENEVRSLNGTRVTDDILHL 206
Query: 127 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 186
VP+ F+ LR ++ WA+R+ +Y+N+ G+ GG+ WA+LVAR+CQLYP A +++V++FF
Sbjct: 207 VPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWAMLVARVCQLYPKATSAVVVNKFF 266
Query: 187 RVYTQWRWPNPVLLCAIEEGS--LGLQVWDPR 216
+ +W WP PVLL IE GS + VW+P+
Sbjct: 267 HIMFKWPWPLPVLLKDIEYGSPVTRVPVWNPK 298
>gi|218192685|gb|EEC75112.1| hypothetical protein OsI_11288 [Oryza sativa Indica Group]
Length = 519
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 179/333 (53%), Gaps = 43/333 (12%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
++ G +GP +DID +CVGP A+ + FF L QML E PEV++LH + +A
Sbjct: 137 VLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVSDLHSIENAK-- 194
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
+I RL L +E + R L+G RV QI++L+P
Sbjct: 195 ---------AIHAFDPRL----------------LAVVNEPSWRCLSGVRVNRQIMQLLP 229
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
I+ F+ LRC++ WA++RG++ ++ GF GI+ A+L A +C ++P+A S L + FF +
Sbjct: 230 NIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHATLSSLFNSFFDI 289
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
++ W WP PV L ++ + W P MPI+ P P + +++ ST
Sbjct: 290 FSHWHWPLPVSL--FDQPT----PWRPH-----CCSFMPIVMPCSPPEFCASSITRSTFN 338
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+ +E QRG + + ++N D++W LF PF + YK++LRI +SA A++LR+W GW
Sbjct: 339 KIKEELQRGFALTKG-DRN-GDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELRDWVGW 396
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 341
V+SR R L LK+E + C P P + +D S
Sbjct: 397 VKSRFRNLLLKLESIG---VDCDPDPSEQADHS 426
>gi|145546083|ref|XP_001458725.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426546|emb|CAK91328.1| unnamed protein product [Paramecium tetraurelia]
Length = 550
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 217/412 (52%), Gaps = 35/412 (8%)
Query: 3 RYLPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPV 62
+Y VL+ G V +DID +C+ P R E FF L +L+ + +++ +
Sbjct: 99 KYCSAVLLPYGSVLLGVADSKSDIDLICIAPEFIDRREQFFNGLFYLLSNEQGMEQINKI 158
Query: 63 PDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN---ADEQTVRSLNGCRV 119
P++K + G ID+ +A+L+ +PE++D + D + +N ++++++ +LNG +
Sbjct: 159 ESTSNPIIKMIYKGFHIDINFAQLNSDRVPENIDDNLDELRRNLLQSEDKSMYALNGRKN 218
Query: 120 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 179
I + +P F LR ++ WAK+R V SN+ G+LGGI+WA+L+A+ICQL+P
Sbjct: 219 GILISKSMPDHSQFVQALRIIKQWAKKRKVSSNIIGYLGGISWAILMAKICQLFPRVDLC 278
Query: 180 MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP-RRNPKDKYHLMPIITPAYPCMNS 238
VS FF++Y+QW W PV++ E+ + + D +RN K +M IITPAYP N+
Sbjct: 279 QTVSLFFQIYSQWNWKVPVVIDESEQEIICYYLQDEDKRNDK----IMQIITPAYPFFNT 334
Query: 239 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAEN 298
++ V T + + EFQ G + DW+ + PF FF+ ++ ++ + I ++
Sbjct: 335 TFKVHKITFQTIFQEFQIGAQKLG---------DWNEVLRPFDFFDCFQYFVALSIVSKT 385
Query: 299 ADDLRNWKGWVESRLRQLTLKI---ERHTYNM----LQCHPHPGDFSDKSKPLYCSYFMG 351
+++ W G+ E++L +L LK+ Y+ L+ P + ++ +YF+G
Sbjct: 386 SENFHKWTGFCEAQLPKL-LKLVGNNEEVYDTKSFELRITPEGEENLERDHAKSLTYFLG 444
Query: 352 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR------KPGMQISVAHVT 397
+++ + E +RL + +F ++ L+ + M+I VA+VT
Sbjct: 445 IKKLK----QEAWPLFLRLPITQFAIELNQRKLQSFKNEDEFNMKIYVANVT 492
>gi|108707804|gb|ABF95599.1| Poly polymerase central domain containing protein, expressed [Oryza
sativa Japonica Group]
Length = 550
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 176/328 (53%), Gaps = 47/328 (14%)
Query: 20 HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSI 79
+GP +DID +CVGP A+ + FF L QML E PEV++LH + +A +I
Sbjct: 171 YGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVSDLHSIENAK-----------AI 219
Query: 80 DLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 139
RL L +E + R L+G RV QI++L+P I+ F+ LRC
Sbjct: 220 HAFDPRL----------------LAAVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRC 263
Query: 140 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVL 199
++ WA++RG++ ++ GF GI+ A+L A +C ++P+A S L + FF +++ W WP PV
Sbjct: 264 LKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVS 323
Query: 200 LCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE 259
L +++ + W P MPI+ P P + +++ ST + +E QRG
Sbjct: 324 L--LDQPT----PWRPH-----CCSFMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFA 372
Query: 260 -----ICEAMEKNE-ADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 313
+C + + D++W LF PF + YK++LRI +SA A++LR+W GWV+SR
Sbjct: 373 LTKLGVCTVEQGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELRDWVGWVKSRF 432
Query: 314 RQLTLKIERHTYNMLQCHPHPGDFSDKS 341
R L LK+E + C P P + +D S
Sbjct: 433 RNLLLKLESIG---VDCDPDPSEQADHS 457
>gi|402697303|gb|AFQ90839.1| polyA polymerase alpha, partial [Malaclemys terrapin]
Length = 170
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 123/170 (72%), Gaps = 1/170 (0%)
Query: 23 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 82
GADID LCV PR R DFF ++ EV +L V +A VPV+K F G+ ID+L
Sbjct: 2 GADIDALCVAPRXVDRS-DFFTSFYEKXKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDIL 60
Query: 83 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 142
+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++
Sbjct: 61 FARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKL 120
Query: 143 WAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
WAKR +YSN+ GF GG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 121 WAKRHNIYSNILGFXGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|145551783|ref|XP_001461568.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429403|emb|CAK94195.1| unnamed protein product [Paramecium tetraurelia]
Length = 533
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 217/417 (52%), Gaps = 38/417 (9%)
Query: 3 RYLPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPV 62
+Y VL+ G V +DID +C+ P R E FF L +L+ + +++ +
Sbjct: 75 KYCSAVLLPYGSVLLGVADSKSDIDLICIAPEFIDRREQFFNGLFYLLSNEQGMEQINKI 134
Query: 63 PDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN---ADEQTVRSLNGCRV 119
P++K + G ID+ +A+L+ +PE++D + D + +N ++++++ +LNG +
Sbjct: 135 ESTSNPIIKMIYKGFHIDINFAQLNSDRVPENIDDNLDELRRNLLQSEDKSLYALNGRKN 194
Query: 120 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 179
I + +P F LR ++ WAK+R V SN+ G+LGGI+WA+L+A+ICQL+P
Sbjct: 195 GILISKSMPDHSQFVQALRIIKQWAKKRKVSSNIIGYLGGISWAILMAKICQLFPRVDVC 254
Query: 180 MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWD----PRRNPKDKYHLMPIITPAYPC 235
VS FF++Y+QW W PV++ E+ + ++ + R K +M IITPAYP
Sbjct: 255 QTVSLFFQIYSQWNWKIPVVIDESEQDFIQIETFKTLCWKRDEDKRNDKIMQIITPAYPF 314
Query: 236 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 295
N+++ V+ T + + EFQ G + DW+ + P FF+ ++ ++ I I
Sbjct: 315 FNTTFKVNKITFQTIFQEFQIGAQKLG---------DWNEVLRPLDFFDCFQYFVAISIV 365
Query: 296 AENADDLRNWKGWVESRLRQLTLKIERH-------TYNMLQCHPHPGDFSDKSKPLYCSY 348
++++++ W G+ E++L +L LK+ H T L+ P + ++ +Y
Sbjct: 366 SKSSENFHKWTGFCEAQLPKL-LKLIGHNEAIYDNTSFELRITPDGEENLERDYAKSLTY 424
Query: 349 FMGLQRKQ--------GVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVT 397
F+G+++ + +P+ QF I L ++ + S + M+I VA+VT
Sbjct: 425 FLGIKKLKPDAWPLFLRIPIT---QFAIELNQRKLQ---SFKNEEEFNMKIYVANVT 475
>gi|317026523|ref|XP_001389757.2| poly(A) polymerase Pap [Aspergillus niger CBS 513.88]
Length = 428
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 134/212 (63%), Gaps = 6/212 (2%)
Query: 129 KIQN-FRTTLRCMR-FWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 186
K+QN F + R WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FF
Sbjct: 36 KVQNNFESPAETERSLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFF 95
Query: 187 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
R+ +W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++NVS ST
Sbjct: 96 RIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMST 155
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNW 305
+++ E QRG +I + + + + W+ LF TFF + YK YL I S+ + W
Sbjct: 156 KAVILRELQRGGDIVDKIFLKQ--LRWEDLFARHTFFTKDYKYYLSITASSRTKEAESVW 213
Query: 306 KGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 337
G VES++R L ++R + HP P F
Sbjct: 214 SGLVESKIRHLVGALDRKA-TIAIAHPFPKGF 244
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 346 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNF 404
+Y++GL+ K P G DI + FK + + +PG+ +++ HV +LP
Sbjct: 314 TTYYIGLELKPLEP-GASRSLDISTDAQIFKSTCTSWPGYQPGINDLAITHVRNFDLPED 372
Query: 405 VF-PGGVRPSRP 415
VF PG RP+RP
Sbjct: 373 VFQPGETRPTRP 384
>gi|134055882|emb|CAK44143.1| unnamed protein product [Aspergillus niger]
Length = 393
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 130/206 (63%), Gaps = 6/206 (2%)
Query: 135 TTLRCM--RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 192
T L C WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+ +W
Sbjct: 3 TGLLCAPSSLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNKW 62
Query: 193 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++NVS ST +++
Sbjct: 63 AWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILR 122
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGWVES 311
E QRG +I + + + + W+ LF TFF + YK YL I S+ + W G VES
Sbjct: 123 ELQRGGDIVDKIFLKQ--LRWEDLFARHTFFTKDYKYYLSITASSRTKEAESVWSGLVES 180
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDF 337
++R L ++R + HP P F
Sbjct: 181 KIRHLVGALDRKA-TIAIAHPFPKGF 205
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 339 DKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHV 396
D + +Y + Y++GL+ K P G DI + FK + + +PG+ +++ HV
Sbjct: 267 DDTHVMYTTTYYIGLELKPLEP-GASRSLDISTDAQIFKSTCTSWPGYQPGINDLAITHV 325
Query: 397 TRRNLPNFVF-PGGVRPSRP 415
+LP VF PG RP+RP
Sbjct: 326 RNFDLPEDVFQPGETRPTRP 345
>gi|219124076|ref|XP_002182338.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406299|gb|EEC46239.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 777
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 143/498 (28%), Positives = 223/498 (44%), Gaps = 112/498 (22%)
Query: 8 VLIGLGYDKYSVHGPGA-DIDTLCVGPRHATREEDFFGELHQMLT-----EMPEVTELHP 61
++ G + VH PG+ D+D L + P H +R E FF ++L+ T++H
Sbjct: 160 TIVPFGSYRLGVHRPGSSDLDVLVIAPPHCSRNE-FFTSFVELLSTPANGSQNTFTQIHA 218
Query: 62 VPDAHVPVMKFKF-SGVSIDLLYA------RLSLW------------VIPEDLDISQ--- 99
+P A+ PV+K ++ S + +D+L+ +L W +P+ L Q
Sbjct: 219 IPTAYTPVLKCQYASSLPMDMLFVSVADPTKLIAWRQQSSMKADSRMTLPQHLPPWQPGV 278
Query: 100 ------------------------------------DSILQNADEQTVRSLNGCRVTDQI 123
DS L + D VRSLNG RVT +
Sbjct: 279 DAEAGAGGSIYPKFEEPHTNEQASTTTTTALYYRIDDSDLCDQDPAGVRSLNGARVTQTL 338
Query: 124 LRLVPKI--QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSML 181
L LV + + F+ L ++ WA+ +GVYSNV GF GG+NWA+LVA +C+ YP + +
Sbjct: 339 LDLVIPVGLERFQMVLLMVKAWARAQGVYSNVLGFWGGVNWAILVAYVCRAYPESSIADT 398
Query: 182 VSRFFRVYTQWRWPNPVLLCAIEEGSLG--------LQVWDPRRNPKDKYHLMPIITPAY 233
V FF + W+WP PV L + + S+ L W+P + +D H+ PI+TPAY
Sbjct: 399 VQLFFETFANWKWPTPVSLIDLNDASITTPPPGAAVLPSWNPAIHIRDGLHVCPILTPAY 458
Query: 234 PCMNSSYNVSTSTLRIMMDEFQ-RGHEICEAMEKNEA----------DVDWDTLFEPFT- 281
P MNSSYNV+ LR M + Q H+I ++++ + W L+
Sbjct: 459 PVMNSSYNVALPQLRRMTEALQYTAHKIARWVDRSHTTYNRGVPVRRKIPWHRLWSLNAG 518
Query: 282 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE---RHTYNMLQCHPHPGDFS 338
+ +++Y+ I A + W VESRLR L +E H + PH G F
Sbjct: 519 WVFRHQHYVHATIRAPQGEAFVTWFRLVESRLRVLISSLETPDSHAW------PH-GRFF 571
Query: 339 DKSKPLY----------CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG 388
++ P+ +F+GL+ V + D+R +F + V+ + R
Sbjct: 572 YRNVPIAPYDELNGLREAHFFIGLRFASHV-----DTADVRTLTLDFLRQVNGWIGRDSS 626
Query: 389 MQISVAHVTRRNLPNFVF 406
M +S+ HVT NLP FV
Sbjct: 627 MDLSLGHVTLPNLPRFVL 644
>gi|222637720|gb|EEE67852.1| hypothetical protein OsJ_25654 [Oryza sativa Japonica Group]
Length = 454
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 164/312 (52%), Gaps = 43/312 (13%)
Query: 12 LGYDKYSV--HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 69
L Y Y++ HGP +DID LCVGP AT + FF L Q+L + PEV+EL V A
Sbjct: 77 LTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVSELQTVESA---- 132
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
+ + S +LQ D + RSL+G RV +QI++LVP
Sbjct: 133 -----------------------KAIITSNPHLLQKLDSLSWRSLSGVRVNEQIVQLVPN 169
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
Q F+ LRC++ WAKRRG++ ++ GF GI+ A+L A +CQ YP + L + FF ++
Sbjct: 170 AQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGTINGLFTIFFDIF 229
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
W W PV SL Q + RR P + MPI+ P P + N++ T +
Sbjct: 230 AHWNWQIPV--------SLHGQPTNCRR-PDGSF--MPILLPCTPPEFCTSNMTKGTFKK 278
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 309
+ +E RG+ + + E D +W LF PF + Y+ +LRI + A +++LR+W GWV
Sbjct: 279 IREELMRGYALTK--EPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELRDWAGWV 336
Query: 310 ESRLRQLTLKIE 321
+SR L LK+E
Sbjct: 337 KSRF-NLILKLE 347
>gi|402877145|ref|XP_003902301.1| PREDICTED: poly(A) polymerase alpha [Papio anubis]
gi|119602049|gb|EAW81643.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
gi|119602053|gb|EAW81647.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
Length = 495
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/259 (40%), Positives = 151/259 (58%), Gaps = 23/259 (8%)
Query: 164 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 223
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 224 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 283
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFF 118
Query: 284 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFS 338
+ YK+Y+ + SA W G VES++R L +E++ + L Q P P +
Sbjct: 119 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENP 178
Query: 339 DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQI 391
DK + + +GL K+ E D+ ++ F +QA++ M+ + M+I
Sbjct: 179 DKEE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKI 233
Query: 392 SVAHVTRRN----LPNFVF 406
+ HV R+ LPN V
Sbjct: 234 AAMHVKRKQLHQLLPNHVL 252
>gi|403274237|ref|XP_003928889.1| PREDICTED: poly(A) polymerase alpha [Saimiri boliviensis
boliviensis]
Length = 495
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/259 (40%), Positives = 151/259 (58%), Gaps = 23/259 (8%)
Query: 164 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 223
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 224 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 283
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFF 118
Query: 284 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFS 338
+ YK+Y+ + SA W G VES++R L +E++ + L Q P P +
Sbjct: 119 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENP 178
Query: 339 DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQI 391
DK + + +GL K+ E D+ ++ F +QA++ M+ + M+I
Sbjct: 179 DKEE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKI 233
Query: 392 SVAHVTRRN----LPNFVF 406
+ HV R+ LPN V
Sbjct: 234 AAMHVKRKQLHQLLPNHVL 252
>gi|384080895|dbj|BAM11110.1| poly(A) polymerase alpha, partial [Siebenrockiella crassicollis]
Length = 352
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 152/260 (58%), Gaps = 23/260 (8%)
Query: 163 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 222
A+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+
Sbjct: 1 AMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDR 60
Query: 223 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 282
YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE F
Sbjct: 61 YHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNF 118
Query: 283 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDF 337
F+ YK+Y+ + SA W G VES++R L +E++ + L Q P P +
Sbjct: 119 FQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKEN 178
Query: 338 SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQ 390
DK + + +GL K+ E D+ ++ F +QA++ M+ + M+
Sbjct: 179 PDKEE-FRTMWVIGLVFKKT-ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMK 233
Query: 391 ISVAHVTRRN----LPNFVF 406
I+ HV R+ LPN V
Sbjct: 234 IAAMHVKRKQLHQLLPNHVL 253
>gi|395539230|ref|XP_003771575.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
Length = 379
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 96/183 (52%), Positives = 123/183 (67%), Gaps = 3/183 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH + DFF ++ L EV +L V +A VP
Sbjct: 197 IFTFGSYRLGVHTKGADIDALCVAPRHVD-QSDFFTSFYEKLKLQEEVKDLRAVEEAFVP 255
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
V+K F G+ ID+L+ARL+L PEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP
Sbjct: 256 VIKLCFDGIEIDILFARLALQTFPEDLDLHDDSLLKNLDIRCIRSLNGCRVTDEILHLVP 315
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSR--FF 186
I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYPNA+ S S F
Sbjct: 316 NIDNFRLTLRAIKIWAKHHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTQTSAHYIF 375
Query: 187 RVY 189
+ Y
Sbjct: 376 QTY 378
>gi|1709573|sp|P51005.1|PAPO2_XENLA RecName: Full=Poly(A) polymerase alpha-B; Short=PAP-alpha-B;
AltName: Full=Polynucleotide adenylyltransferase alpha-B
gi|643646|gb|AAC59746.1| poly(A) polymerase type 2 [Xenopus laevis]
Length = 484
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 152/261 (58%), Gaps = 16/261 (6%)
Query: 164 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 223
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 224 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 283
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLVKA--EWSKLFDAPNFF 118
Query: 284 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFS 338
+ YK+Y+ + SA W G VES++R L +E++ + L Q P P + S
Sbjct: 119 QKYKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPSPSENS 178
Query: 339 DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISV 393
+K + + +GL K+ + E D+ ++ F +QA++ ++I+
Sbjct: 179 EKEE-FRTMWVIGLVFKK-MENSENLSVDLTYDIQSFTDTVYRQAINSKMFET-EIKIAA 235
Query: 394 AHVTRRNLPNFVFPGGVRPSR 414
HV R+ L + + P V P +
Sbjct: 236 MHVKRKQL-HQLLPSHVLPKK 255
>gi|297695842|ref|XP_002825134.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Pongo abelii]
Length = 497
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 151/261 (57%), Gaps = 25/261 (9%)
Query: 164 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR--RNPKD 221
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVSVNPSD 60
Query: 222 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 281
+YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE
Sbjct: 61 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPN 118
Query: 282 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGD 336
FF+ YK+Y+ + SA W G VES++R L +E++ + L Q P P +
Sbjct: 119 FFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE 178
Query: 337 FSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGM 389
DK + + +GL K+ E D+ ++ F +QA++ M+ + M
Sbjct: 179 NPDKEE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DM 233
Query: 390 QISVAHVTRRN----LPNFVF 406
+I+ HV R+ LPN V
Sbjct: 234 KIAAMHVKRKQLHQLLPNHVL 254
>gi|242035935|ref|XP_002465362.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
gi|241919216|gb|EER92360.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
Length = 589
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 159/305 (52%), Gaps = 39/305 (12%)
Query: 20 HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSI 79
+GP +DID LC+GP AT + FF L QML PEV+EL + A VP+M+FKF+G+ +
Sbjct: 214 YGPESDIDVLCIGPYIATLQHHFFVVLRQMLEGRPEVSELQSIEGAKVPLMRFKFNGILV 273
Query: 80 DLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 139
D Y +L E + +L+N D + R L+G R QI++LVP ++
Sbjct: 274 DFPYVQLPFINAAEAMHAFDPHVLENVDGPSWRCLSGVRANRQIIQLVPNMK-------- 325
Query: 140 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVL 199
+ GF GI+ A+L A +C+ +PNA + L+S FF ++ W WP PV
Sbjct: 326 -------------LLGFFAGIHLAILAAYVCRRHPNASINTLLSLFFDIFAHWPWPLPVS 372
Query: 200 LCAIEEGSLGLQVWDPR---RNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 256
L DP R P D LMPI+ P P S + + ST + +E +R
Sbjct: 373 LL------------DPPVLCRGP-DGCSLMPIMLPCNPPEFCSSSTTESTFSKIKEELRR 419
Query: 257 GHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL 316
G+ + + + D DW LF F + YK +LRI +SA ++LR+W GWV+SR R L
Sbjct: 420 GYALTK--DTRSTDFDWSWLFASFPYGARYKCFLRIVLSAPLDEELRDWVGWVKSRFRNL 477
Query: 317 TLKIE 321
LK+E
Sbjct: 478 LLKLE 482
>gi|118376886|ref|XP_001021625.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|89303391|gb|EAS01379.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 707
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 205/424 (48%), Gaps = 39/424 (9%)
Query: 1 MPRYLPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELH 60
+ R LP LG V D+D +C+ P R + F G+L+ M++ M V +
Sbjct: 204 LARVLPFGSYFLG-----VSSVDGDVDLVCIAPNFVDRFKHFNGQLYDMISNMDGVEYHN 258
Query: 61 PVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDIS-QDSILQNADEQTVRSLNGCRV 119
V DA VP+M+F+ GV ID+ +A+L + +P+D+D D+ L DE+ S+NG R
Sbjct: 259 NVIDAKVPIMQFEIQGVPIDISFAQLDVETLPDDIDKQIPDTHLTMMDERDKLSINGYRC 318
Query: 120 TDQILRLVPK--------IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 171
I+R V + Q F+ +L+ ++ WA+ G+Y N G+LGGI+WALL+A+ICQ
Sbjct: 319 NQAIIRYVTEHSEDKQQSKQRFQESLKVIKIWARNNGIYENRLGYLGGISWALLLAKICQ 378
Query: 172 LYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 230
++PN + ++ +FF Y+ W+WP VLL + P K++ M I T
Sbjct: 379 MFPNLEVNGIIEQFFLQYSSWKWPTMEVLLGPFSQ---------PEERQKNQKFEMSIYT 429
Query: 231 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 290
PAYP NS+ V L I+ + + + I + E WD L + F Y ++
Sbjct: 430 PAYPEYNSTERVKKINLEIIDYKIKEANRIIQE-EIKTGQAPWDRLIQEEDFLNKYTKFI 488
Query: 291 RID-ISAENADDLRNWKGWVES---RLRQLTLKIERHTYNMLQCHPHPGDF--SDKSKPL 344
ID I E + +R +K + +L L + L+ P P + D+ P
Sbjct: 489 EIDLIRIERDETMREFKTQQDKLSVKLLTLFEFFSQKKPQELEIRPWPFFYKKKDQKYPQ 548
Query: 345 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF--KQAVSMYTLRKPGMQISVAHVTRRNLP 402
++ +G++ K + E++ + ++EF +Q S+ L I V T+++L
Sbjct: 549 CSAFLIGIKAKSHI----QEEYSFKNCIQEFAMQQRKSLDAL--TNCMIRVFQATKQDLN 602
Query: 403 NFVF 406
+ F
Sbjct: 603 DIAF 606
>gi|324504415|gb|ADY41908.1| Poly(A) polymerase gamma [Ascaris suum]
Length = 560
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 148/266 (55%), Gaps = 27/266 (10%)
Query: 156 FLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-------SL 208
FLGG++WA+LVAR CQLYPNA P+ L+ +FF V+T+W WP+PVLL ++ S
Sbjct: 50 FLGGVSWAILVARTCQLYPNAAPAKLIQKFFLVFTRWEWPHPVLLKDCDQTPRPPDMQSF 109
Query: 209 GLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE 268
VWDPR D+YHLMPIITPA+P NS++NV+ ST +++M+E + G I +E
Sbjct: 110 QELVWDPRTRSCDRYHLMPIITPAFPEQNSTFNVTKSTRQVIMNELEEGLAI--TIEILS 167
Query: 269 ADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML 328
+W LF+ FF YK+++ + A N +D W G VES++R L +ER+ L
Sbjct: 168 GKAEWSKLFDEVNFFSRYKHFIVLLCVAANENDQLVWSGLVESKIRHLIGNLERNPCVSL 227
Query: 329 QCHPHPGDFSDKS---------KPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 379
CH +P F+ S P +F+G++ + + + D+ +++F AV
Sbjct: 228 -CHINPQHFTPISPLPIEISIENPCCQMWFIGMELNKQL----KKNIDLTDEIQQFNDAV 282
Query: 380 ----SMYTLRKPGMQISVAHVTRRNL 401
+ PGM + ++V R +L
Sbjct: 283 MRAADFQNVYCPGMAVLPSYVRRADL 308
>gi|9453842|dbj|BAB03277.1| poly A polymerase [Drosophila melanogaster]
Length = 255
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 104/149 (69%), Gaps = 1/149 (0%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + VH GADID LCV PR+ R D+F ++L + PEVTE V +A VPV+K
Sbjct: 108 FGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVPVIK 166
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F G+ IDLL+ARLSL IP+D D+ D++L+N D ++VRSLNGCRVTD+IL LVP I+
Sbjct: 167 MNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIE 226
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGI 160
NFR LR ++ WAK+ G+YSN G+ GG+
Sbjct: 227 NFRLALRTIKLWAKKHGIYSNSLGYFGGV 255
>gi|219887573|gb|ACL54161.1| unknown [Zea mays]
gi|414888169|tpg|DAA64183.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888170|tpg|DAA64184.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 482
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 126/191 (65%), Gaps = 4/191 (2%)
Query: 12 LGYDKYSV--HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 69
L Y Y++ HGP +DID LC+GP AT + FF L Q+L PEV+E+H V A VP+
Sbjct: 138 LTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSEVHTVEKAKVPL 197
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
M+F+F+G+++DL YA+L + + ++ +LQ D ++ RSL+G RV +QI++LVP
Sbjct: 198 MRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVRVNEQIVQLVPN 257
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
+ F+T LRC++ WA++RG++ + GF GI+ A+L A +C+ +P+A S L + FF+ +
Sbjct: 258 AEKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTF 317
Query: 190 TQWRW--PNPV 198
W W P+P+
Sbjct: 318 AHWPWQVPDPL 328
>gi|6473835|dbj|BAA87187.1| PolyA polymerase [Schizosaccharomyces pombe]
Length = 204
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 108/162 (66%), Gaps = 2/162 (1%)
Query: 160 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNP 219
+ WA++VARICQLYPNAV S++V++FFR+ QW WP P+LL IE+G L +++W+P+ P
Sbjct: 1 VAWAMMVARICQLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYP 60
Query: 220 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 279
DK H MPIITPAYP M +++N++ ST I++ E R EI + + + W LF+
Sbjct: 61 SDKAHRMPIITPAYPSMCATHNITLSTQTIILREMVRAGEIADQIMVKA--LPWSALFQK 118
Query: 280 FTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 321
FF YK+YL I +A+ A+ W G VES+LR L ++E
Sbjct: 119 HDFFHRYKHYLTITAAAKTAEAQLKWAGLVESKLRHLVTRLE 160
>gi|115378897|ref|ZP_01466034.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
gi|115364103|gb|EAU63201.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
Length = 1080
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 183/403 (45%), Gaps = 37/403 (9%)
Query: 5 LPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPD 64
L L L G G G+D+D + +GP H +RE DF G L Q LT+ + + D
Sbjct: 696 LGLELYPYGSFLMGTSGTGSDVDAVVIGPAHLSRE-DFAGALLQALTQEKDCEGARFIAD 754
Query: 65 AHVPVMKFKFSGVSIDLLYARLSLWVIP---EDLDISQDSILQNADEQTVRSLNGCRVTD 121
A +P++K GV D+ YA V P +L Q L D RSL G TD
Sbjct: 755 AAIPLVKLSLGGVHFDVSYASRPEGVAPCPPAELLARQGERL---DLAGFRSLTGWADTD 811
Query: 122 QILRLVPK----IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP--- 174
+L V + ++ FRT LR ++ WAK RGVYS+ G+LGG +WA+L A C P
Sbjct: 812 ALLECVGREEADLERFRTLLRAVKTWAKARGVYSHALGYLGGFSWAVLTAWACMRAPRDS 871
Query: 175 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 234
+ L+ FF ++ W WP PV L G+ R P+ K MP++ PA P
Sbjct: 872 SRTEEQLLDYFFEMFAAWPWPLPVTLTP---GTA-------RYVPEGKRDQMPVVAPALP 921
Query: 235 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 294
N++ NVS STLR++ +E R E + WD LF P + + +
Sbjct: 922 PRNTARNVSRSTLRVLREELARASEALRRARQEGTAEAWDALFAPVEIPGPTAAQVVVSV 981
Query: 295 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQR 354
A+ +D + GW+ L L ++E L+ P S+P + +GL
Sbjct: 982 EAKAHEDRQVAAGWILGHLTALVYRLEGDRRLFLRPFP-------PSQP-EGPFRIGLS- 1032
Query: 355 KQGVPVGEGEQFD----IRLTVKEFKQAVSMYTLRKPGMQISV 393
QG G+ ++ + EF+++ ++ R PG +SV
Sbjct: 1033 AQGPEAGQALSHHPGAPLQRALDEFRESFHAWSHRPPGASLSV 1075
>gi|310817728|ref|YP_003950086.1| endonuclease/exonuclease/phosphatase domain-containing protein
[Stigmatella aurantiaca DW4/3-1]
gi|309390800|gb|ADO68259.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella
aurantiaca DW4/3-1]
Length = 1024
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 183/403 (45%), Gaps = 37/403 (9%)
Query: 5 LPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPD 64
L L L G G G+D+D + +GP H +RE DF G L Q LT+ + + D
Sbjct: 640 LGLELYPYGSFLMGTSGTGSDVDAVVIGPAHLSRE-DFAGALLQALTQEKDCEGARFIAD 698
Query: 65 AHVPVMKFKFSGVSIDLLYARLSLWVIP---EDLDISQDSILQNADEQTVRSLNGCRVTD 121
A +P++K GV D+ YA V P +L Q L D RSL G TD
Sbjct: 699 AAIPLVKLSLGGVHFDVSYASRPEGVAPCPPAELLARQGERL---DLAGFRSLTGWADTD 755
Query: 122 QILRLVPK----IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP--- 174
+L V + ++ FRT LR ++ WAK RGVYS+ G+LGG +WA+L A C P
Sbjct: 756 ALLECVGREEADLERFRTLLRAVKTWAKARGVYSHALGYLGGFSWAVLTAWACMRAPRDS 815
Query: 175 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 234
+ L+ FF ++ W WP PV L G+ R P+ K MP++ PA P
Sbjct: 816 SRTEEQLLDYFFEMFAAWPWPLPVTLTP---GTA-------RYVPEGKRDQMPVVAPALP 865
Query: 235 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 294
N++ NVS STLR++ +E R E + WD LF P + + +
Sbjct: 866 PRNTARNVSRSTLRVLREELARASEALRRARQEGTAEAWDALFAPVEIPGPTAAQVVVSV 925
Query: 295 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQR 354
A+ +D + GW+ L L ++E L+ P S+P + +GL
Sbjct: 926 EAKAHEDRQVAAGWILGHLTALVYRLEGDRRLFLRPFP-------PSQP-EGPFRIGLS- 976
Query: 355 KQGVPVGEGEQFD----IRLTVKEFKQAVSMYTLRKPGMQISV 393
QG G+ ++ + EF+++ ++ R PG +SV
Sbjct: 977 AQGPEAGQALSHHPGAPLQRALDEFRESFHAWSHRPPGASLSV 1019
>gi|115474207|ref|NP_001060702.1| Os07g0688500 [Oryza sativa Japonica Group]
gi|113612238|dbj|BAF22616.1| Os07g0688500 [Oryza sativa Japonica Group]
Length = 447
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 154/320 (48%), Gaps = 59/320 (18%)
Query: 2 PRYLPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHP 61
PR ++ G HGP +DID LCVGP AT + FF L Q+L + PEV+EL
Sbjct: 112 PRRATATVLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVSELQT 171
Query: 62 VPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTD 121
V A + S +LQ D + RSL+G RV +
Sbjct: 172 VESAKAIIT---------------------------SNPHLLQKLDSLSWRSLSGVRVNE 204
Query: 122 QILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSML 181
QI++LVP Q F+ LRC++ WAKRRG++ ++ GF GI+ A+L A +CQ YP ++
Sbjct: 205 QIVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGTINV- 263
Query: 182 VSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYN 241
SL Q + RR P + MPI+ P P + N
Sbjct: 264 -------------------------SLHGQPTNCRR-PDGSF--MPILLPCTPPEFCTSN 295
Query: 242 VSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD 301
++ T + + +E RG+ + + E D +W LF PF + Y+ +LRI + A +++
Sbjct: 296 MTKGTFKKIREELMRGYALTK--EPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEE 353
Query: 302 LRNWKGWVESRLRQLTLKIE 321
LR+W GWV+SR L LK+E
Sbjct: 354 LRDWAGWVKSRF-NLILKLE 372
>gi|407036560|gb|EKE38225.1| poly(A) polymerase, putative [Entamoeba nuttalli P19]
Length = 522
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 177/351 (50%), Gaps = 18/351 (5%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + +V+G +DID V TR+ DF+ L+ L P+V EL +P P +
Sbjct: 64 GSYRLNVYGNNSDIDACIVSNSTITRD-DFYDGLYAELLNNPDVKELKQIPSKRSPHLSM 122
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK--I 130
+ + DL ++R + +P++LDI ++IL+N DE R++NG R TD I VP
Sbjct: 123 IYLNIEFDLNFSRTAYTSLPDNLDILNENILKNMDELDTRAINGVRNTDIIDAFVPNHSE 182
Query: 131 QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYT 190
+ FR +R ++ W K+RG+Y V FL GI+ +LVA++ L+ +FF+VY+
Sbjct: 183 EAFRVMVRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVISENYQLDNVRLLEKFFQVYS 242
Query: 191 QWRW-PNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
W W PV+L ++ N K K ++ I+TPA P N++++++ +L +
Sbjct: 243 SWDWLRTPVMLGTNDDF-----------NDKKKEGIIQILTPASPSENAAFSITKFSLEM 291
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 309
+ E +RG EI +E DW LF+P F Y ++ +++ + + L G
Sbjct: 292 IKRELKRGQEIVHEF-SSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEGLTTTIGKF 350
Query: 310 ESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPV 360
ES L L +K +++ + P F D+ Y Y++G+ K+ PV
Sbjct: 351 ESGLVNL-MKGLSEIEEIIEANVIPNGFLDEENERYF-YYVGMNVKRDCPV 399
>gi|67481711|ref|XP_656205.1| poly(A) polymerase [Entamoeba histolytica HM-1:IMSS]
gi|74890661|sp|Q51D88.1|PAP_ENTHI RecName: Full=Poly(A) polymerase; Short=PAP; AltName: Full=EhPAP;
AltName: Full=Polynucleotide adenylyltransferase
gi|56473392|gb|EAL50821.1| poly(A) polymerase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709651|gb|EMD48877.1| poly(A) polymerase, putative [Entamoeba histolytica KU27]
Length = 522
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 177/351 (50%), Gaps = 18/351 (5%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + +V+G +DID V TR+ DF+ L+ L P+V EL +P P +
Sbjct: 64 GSYRLNVYGNNSDIDACIVSNSTITRD-DFYDGLYAELLNNPDVKELKQIPSKRSPHLSM 122
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK--I 130
+ + DL ++R + +P++LDI ++IL+N DE R++NG R TD I VP
Sbjct: 123 IYLNIEFDLNFSRTAYTSLPDNLDILNENILKNMDELDTRAINGVRNTDIIDAFVPNHSE 182
Query: 131 QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYT 190
+ FR +R ++ W K+RG+Y V FL GI+ +LVA++ L+ +FF+VY+
Sbjct: 183 EAFRVMVRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVISENYQLDNVRLLEKFFQVYS 242
Query: 191 QWRW-PNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
W W PV+L ++ N K K ++ I+TPA P N++++++ +L +
Sbjct: 243 SWDWLRTPVMLGTNDDF-----------NDKKKEGVIQILTPASPSENAAFSITKFSLEM 291
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 309
+ E +RG EI +E DW LF+P F Y ++ +++ + + L G
Sbjct: 292 IKRELKRGQEIVHEF-SSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEGLTTTIGKF 350
Query: 310 ESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPV 360
ES L L +K +++ + P F D+ Y Y++G+ K+ PV
Sbjct: 351 ESGLVNL-MKGLSEIEEIIEANVIPNGFLDEENEKYF-YYVGMNVKRDCPV 399
>gi|167393770|ref|XP_001740701.1| poly(A) polymerase [Entamoeba dispar SAW760]
gi|165895071|gb|EDR22875.1| poly(A) polymerase [Entamoeba dispar SAW760]
Length = 521
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 177/351 (50%), Gaps = 18/351 (5%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + +V+G +DID V TR+ DF+ L+ L P+V EL +P P +
Sbjct: 64 GSYRLNVYGNNSDIDACIVSNSTITRD-DFYDGLYAELLNNPDVKELKQIPSKRSPHLSM 122
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK--I 130
+ + DL ++R + +P++LDI ++IL+N DE R++NG R TD I VP
Sbjct: 123 IYLNIEFDLNFSRTAYTSLPDNLDILNENILKNMDELDTRAINGVRNTDIIDAFVPNHSE 182
Query: 131 QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYT 190
+ FR +R ++ W K+RG+Y V FL GI+ +LVA++ L+ +FF+VY+
Sbjct: 183 EAFRVMVRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVISENYQLDNVRLLEKFFQVYS 242
Query: 191 QWRWPN-PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
W W PV+L ++ N K K ++ I+TPA P N++++++ +L +
Sbjct: 243 SWDWLRAPVMLGTNDDF-----------NDKKKEGVIQILTPASPSENAAFSITKFSLEL 291
Query: 250 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 309
+ E +RG EI +E DW LF+P F Y ++ +++ + + L G
Sbjct: 292 IKRELKRGQEIVHEF-SSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEGLTTTIGKF 350
Query: 310 ESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPV 360
ES L L +K +++ + P F D+ Y Y++G+ K+ PV
Sbjct: 351 ESGLVNL-MKGLSEIEEIVEANVIPNGFLDEENEKYF-YYVGMNVKRDCPV 399
>gi|440294386|gb|ELP87403.1| polyA polymerase, putative [Entamoeba invadens IP1]
Length = 482
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 178/356 (50%), Gaps = 21/356 (5%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+G ADID CV EDFF +L++ L P+V E+ + P
Sbjct: 60 IFTYGSYRLDVYGNNADIDA-CVVTNSTIEREDFFNDLYEDLKNNPDVREIRQIKSVRAP 118
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 128
++ + + IDL +AR + +P+++DI + IL DE + R++NG R TD I VP
Sbjct: 119 ILTMTYMKIDIDLNFARTAHTTLPKEMDILSERILDEMDELSTRAINGRRNTDMINNFVP 178
Query: 129 --KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 186
++ F+ +R ++ W+K+RG+Y V +L GI+ +LVA++ L+ +FF
Sbjct: 179 PHSVEAFKVIVRAIKMWSKKRGIYGYVYSYLNGISIEILVAQVISENYQLDNVRLLEKFF 238
Query: 187 RVYTQWRWP-NPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
Y W W NPV+L ++ R + K ++ +ITPA P NS YN++ S
Sbjct: 239 HAYATWDWARNPVMLGVSDD-----------RPERKKEEMVQVITPAAPRENSMYNMTRS 287
Query: 246 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA-DDLRN 304
+L ++ E RG I + K+E DW+ LF+ F Y Y+ ++ S + + L N
Sbjct: 288 SLELLKREMLRGERIVKGY-KSEGGNDWNLLFKKRHCFCGY--YIFVEFSVRGSLESLEN 344
Query: 305 WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPV 360
G ES++ + +E +++ + P + + + Y++G+ K+ + V
Sbjct: 345 KIGMFESKIVRFVRSLEEME-EVIEVNVIPEGYLEVENAV-DYYYVGMNVKKDLLV 398
>gi|413955903|gb|AFW88552.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
Length = 370
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 118/188 (62%), Gaps = 2/188 (1%)
Query: 12 LGYDKYSV--HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 69
L + Y++ +GP +DID LC+GP A+ + FF L QML PEV+ELH + A VP+
Sbjct: 129 LTFGSYALGAYGPESDIDVLCIGPYIASLQHHFFVVLRQMLEGRPEVSELHSIEGAKVPL 188
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
M+FKF+G+ +D Y +L + E + +L+N D + R L+G R QI++LVP
Sbjct: 189 MRFKFNGILVDFPYVQLPVINAAEAMHAFDPHVLENVDGPSWRCLSGVRANRQIIQLVPN 248
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
++ F+ LRC++ WA++RG+ ++ GF GI+ A+L A +C+ +PNA + L+S FF ++
Sbjct: 249 MKKFQYLLRCLKLWARKRGLDCHLLGFFAGIHLAILAAYVCRRHPNASINTLLSLFFDIF 308
Query: 190 TQWRWPNP 197
W WP P
Sbjct: 309 VHWPWPLP 316
>gi|300120198|emb|CBK19752.2| unnamed protein product [Blastocystis hominis]
Length = 359
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 137/244 (56%), Gaps = 16/244 (6%)
Query: 144 AKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI 203
A +RG+Y NV G+LGG+N ALL LYPNA S+++ FR++ +W W PVL+ +
Sbjct: 109 AYKRGIYKNVTGYLGGVNCALLCCYASLLYPNATASVVLYNCFRIFAEWDWQKPVLVRDV 168
Query: 204 E---EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEI 260
+ E VW+P+ N + + L PI+TP YP NS+YNV ST +M+ EF+R ++
Sbjct: 169 QLNPELGHDKDVWNPKENERCQNDLFPILTPCYPSQNSTYNVMASTRDVMVAEFKRARDV 228
Query: 261 CEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKI 320
++ K E W TLF+ F FF +YK Y++I++SA+ ++ NW G+VES++R+ T I
Sbjct: 229 TLSILKGET--TWATLFKEFPFFTSYKYYIQIEVSAKTSEVFNNWYGFVESQIRRYTRMI 286
Query: 321 ERHTYNMLQCHPHPGD--------FSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTV 372
E + ++ +P D + PL +++ + +G+ D+ L
Sbjct: 287 EGNKSIVIHVYPTSFDVVRERGSSYVQPDSPLCKQFYIAF---TPLEAAKGKPLDLSLAT 343
Query: 373 KEFK 376
++FK
Sbjct: 344 RQFK 347
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDF 42
L G + VH P ADIDT+CVGP TREE F
Sbjct: 53 LYTFGSFRMMVHEPWADIDTMCVGPGSVTREEFF 86
>gi|383455075|ref|YP_005369064.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
gi|380728996|gb|AFE04998.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
Length = 1021
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 148/308 (48%), Gaps = 22/308 (7%)
Query: 21 GPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSID 80
G G+D+D + +GP +R D F Q L + V DA +P++K GVS D
Sbjct: 646 GAGSDVDAVAIGPAELSR--DAFA---QSLLQALAPGSARYVADAAIPLVKLTLGGVSFD 700
Query: 81 LLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVT----DQILRLVPKIQNFRTT 136
L YA V PED + D +R++ G T D + R + + FRT
Sbjct: 701 LAYAGRPEGVPPEDPLTLLGLHGEQLDPAGLRAVLGLADTLGLMDAVARDAARTERFRTL 760
Query: 137 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC-QLYPNAVPS--MLVSRFFRVYTQWR 193
LR ++ WA+ RG+YS+ G+LGG++W LL A C + P+A+ S L+S FF + W
Sbjct: 761 LRAVKAWARARGIYSHALGYLGGLSWTLLAAWACTRATPDAMRSDAALLSHFFGTFAAWP 820
Query: 194 WPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 253
WP PV L R P+ K L+P+I PA P N++ NVS ST R++ +E
Sbjct: 821 WPQPVTLTPETA----------RYRPEGKRDLLPVIAPALPARNTARNVSRSTYRVIREE 870
Query: 254 FQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 313
R E+ + A W LF+P + E LR+ + A A+D GW+ +
Sbjct: 871 LLRARELVARARSSRAPSSWAALFQPLSAHETSPAALRLSVDAPTAEDREVVAGWILGHV 930
Query: 314 RQLTLKIE 321
L ++E
Sbjct: 931 TALVYRLE 938
>gi|222623746|gb|EEE57878.1| hypothetical protein OsJ_08540 [Oryza sativa Japonica Group]
Length = 253
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 131/274 (47%), Gaps = 72/274 (26%)
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQ--DSILQNADE-QTVRSLNGCRVTDQILRLVP 128
+F GV +DL+YA + L P Q S+L+ D+ T RSLNG RV D+ILRLVP
Sbjct: 1 MRFRGVQVDLVYAGVCLPWCPTTWSGPQCDRSVLRGLDDLATARSLNGIRVADEILRLVP 60
Query: 129 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 188
+ FRT LRC++ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYPN P+
Sbjct: 61 ETAVFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPACCSRASSAA 120
Query: 189 YTQWRWPNPVLLCAIE--EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
P V+L AIE +G LGL RR+
Sbjct: 121 LRGGSGPARVMLRAIEHDDGELGL-----RRH---------------------------- 147
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
LR+ ++ G ++C+ + K A W
Sbjct: 148 LRVTTEQLAVGDDVCQEIVKAGA----------------------------------MWV 173
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 340
GWVESRLRQL+ ++E T +L CH HP ++ +
Sbjct: 174 GWVESRLRQLSARVEADTSGVLLCHLHPQAYATE 207
>gi|340503458|gb|EGR30046.1| poly polymerase, putative [Ichthyophthirius multifiliis]
Length = 269
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 130/230 (56%), Gaps = 21/230 (9%)
Query: 24 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLY 83
DID +C P+ RE F +L+++ + EL + +A++P++ F ++ ID+ +
Sbjct: 21 GDIDMVCASPQFIKRETHFHEDLYKIFKANKNIKELKNIIEANIPIISFIYNDQDIDISF 80
Query: 84 ARLSLWVIPEDLDIS-QDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 142
A+ L ++PE+++ + +L++ E+ V SLNG R I+ V + F+ TL+ ++
Sbjct: 81 AQFKLNILPENIEGEIPEELLEDMTEKDVDSLNGRRCNQSIINSVKDQEKFKNTLKFIKL 140
Query: 143 WAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCA 202
WAK +GVY+N+ GFLGGI+WA+LVA+ICQ++PN + L++ FF YT W +
Sbjct: 141 WAKSKGVYNNMLGFLGGISWAILVAKICQMFPNYEVNQLINEFFYYYTHWDF-------- 192
Query: 203 IEEGSLGLQVWDPRRNPKDKYH---------LMPIITPAYPCMNSSYNVS 243
+ +++ + N K K++ M ++T +P NS+ ++S
Sbjct: 193 ---SQIPIKIKEYYENTKHKHYNIKKRKESIFMNVMTSCFPEYNSTAHLS 239
>gi|146163985|ref|XP_001012769.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|146145863|gb|EAR92524.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 641
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 106/185 (57%), Gaps = 1/185 (0%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L+ G V DID +C P R F EL Q+L V +L + A VP
Sbjct: 105 LLTFGSSILGVSSKKGDIDMVCTCPNFIKRNPHFEEELCQILLNNENVKQLSNIRTAKVP 164
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLD-ISQDSILQNADEQTVRSLNGCRVTDQILRLV 127
++ F++ ID+ +A+L L +P ++ D +LQN +E+ + SL+G R I+R V
Sbjct: 165 IITFQYKEQDIDISFAQLQLPQLPPTIEEYVSDDLLQNMEERDILSLSGRRCNQAIVRSV 224
Query: 128 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 187
P +QNF+ T R ++ WA+ +G+Y N GFLGGI+WA+LVA+ICQ++PN + L+ FF
Sbjct: 225 PNLQNFQITCRFIKLWAQSKGIYENSIGFLGGISWAILVAKICQMFPNYEANQLLDEFFY 284
Query: 188 VYTQW 192
Y+ W
Sbjct: 285 YYSNW 289
>gi|384485719|gb|EIE77899.1| hypothetical protein RO3G_02603 [Rhizopus delemar RA 99-880]
Length = 494
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 166/324 (51%), Gaps = 30/324 (9%)
Query: 24 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLY 83
ADID + V P R+ FF Q+L + V+ + + A+VP++K +SID+ +
Sbjct: 80 ADIDLVLVCPIQVLRKY-FFKFFPQLLKQQTLVSNVESIQKANVPIIKCTIDNISIDISF 138
Query: 84 ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVT----DQILRLVPKIQNFRTTLRC 139
RL + + ++++ DS+L++ DE + S++G RV +QI R ++ F+ L+C
Sbjct: 139 VRLKVERVAQNINFLDDSLLKDIDETCLASMDGPRVNQFCKNQIYR--QHVRLFQVCLQC 196
Query: 140 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA---VPSMLVSRFFRVYTQWRWPN 196
++ WA +RG+YS G+L G +W LL+ + N +M++SRFF +++QW W
Sbjct: 197 IKHWATQRGIYSKPIGYLNGSSWTLLLVKAYMSIKNKELLSVTMILSRFFSMWSQWPWQM 256
Query: 197 PVLLCAIEEGSLGLQVWDPRRNPKDKYH--LMPIITPAYPCMNSSYNVSTSTLRIMMDEF 254
PV+L G G ++ N ++ +MPI++P +P N + V+ ST RIM EF
Sbjct: 257 PVMLTDYIPGINGTKI---EYNSLAEFDNAVMPIVSPCHPVCNVAPYVTKSTRRIMQIEF 313
Query: 255 QRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLR 314
+RG + A + D LF P + + YK+++ I S+ W +R
Sbjct: 314 ERGWTLLNKNAHPFAII--DKLFNPVNYTQRYKHFINIVTSSTTITSHDTW-------VR 364
Query: 315 QLTLKIERHTY------NMLQCHP 332
++ +I R+ N+LQ P
Sbjct: 365 KMATQIPRYLELIESDPNILQAQP 388
>gi|442319649|ref|YP_007359670.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
gi|441487291|gb|AGC43986.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
Length = 1016
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 145/315 (46%), Gaps = 34/315 (10%)
Query: 23 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEV-TELHPVPDAHVPVMKFKFSGVSIDL 81
G+D+D + +GP +R++ L ++ T PE + V DA +P++K GVS D+
Sbjct: 647 GSDVDAVAIGPSSLSRDDFAHALLREVATSAPEAASSARFVADAAIPLVKLSLGGVSFDV 706
Query: 82 LYARLSLWVIP-----------EDLDISQ-DSILQNADEQTVRSLNGCRVTDQILRLVPK 129
YA V P LD S S+L AD Q V G TD+
Sbjct: 707 SYASRPEGVTPCEPLTLLAQHAPQLDTSGLRSVLGVADSQGVLDALG---TDEATH---- 759
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC-QLYPNAVPS--MLVSRFF 186
+ FR LR ++ WAK RG+YS+ G++GG++W +L A C + P+A S L++ FF
Sbjct: 760 -ERFRNLLRAVKRWAKARGIYSHALGYMGGLSWTVLAAWACTRGAPDAAKSDAELLAHFF 818
Query: 187 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
+ + W WP PV L G P K LMP+I PA P N++ NVS ST
Sbjct: 819 QTFASWPWPQPVALTQETAGY----------RPDGKRDLMPVIAPAEPLRNTARNVSRST 868
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
R + +E R E+ + + W+ LF+P LR+ + A +
Sbjct: 869 FRTVREELVRARELVTGARASSSPHAWEPLFQPVDAPRDLPARLRLSVEAPTPEAHEAAM 928
Query: 307 GWVESRLRQLTLKIE 321
GWV L L ++E
Sbjct: 929 GWVLGHLTALVYRLE 943
>gi|242786597|ref|XP_002480837.1| poly(A) polymerase pla1, putative [Talaromyces stipitatus ATCC
10500]
gi|218720984|gb|EED20403.1| poly(A) polymerase pla1, putative [Talaromyces stipitatus ATCC
10500]
Length = 420
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 86/112 (76%)
Query: 61 PVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVT 120
PVPDA VP++K +FSG+S+DL++ARL L IP +LD+ + L+ D++ VRSLNG RVT
Sbjct: 63 PVPDAFVPIIKLEFSGISLDLIFARLILPSIPLNLDLKNNGYLRGLDDKEVRSLNGTRVT 122
Query: 121 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 172
DQIL LV + + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQL
Sbjct: 123 DQILELVAQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQL 174
>gi|72386969|ref|XP_843909.1| poly(A) polymerase [Trypanosoma brucei]
gi|62359037|gb|AAX79486.1| poly(A) polymerase [Trypanosoma brucei]
gi|70800441|gb|AAZ10350.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 487
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 177/381 (46%), Gaps = 42/381 (11%)
Query: 24 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVP--DAHVPVMKFKFSGVSIDL 81
+D+D + P T + FF E ++L + PV A VPV+KF++ G ++D+
Sbjct: 83 SDLDVALICPSVLT-TDIFFDEFPRLL-----YNSVGPVSVVAARVPVVKFEYRGTAVDV 136
Query: 82 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN-FRTTLRCM 140
++ + L P + + DS L +T S NG R T +I R +P + F L+ +
Sbjct: 137 VFVSVGLPQPPTEEQMLDDSFLLKVARETRPSANGIRFTFEIKRRLPVPYDVFTAVLKTV 196
Query: 141 RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN---- 196
+ WA RR VY NV + G A++VAR+CQ+ P++ PS L+ FF YTQW +
Sbjct: 197 KLWAMRRMVYGNVYTYPNGAVLAIMVARVCQVLPSSHPSTLLRFFFLFYTQWMSRHDRIS 256
Query: 197 PVLLCAIEEGS---LGL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
PV L A EG GL W P ++ K L P+I+PAYP +N + +V L +
Sbjct: 257 PVYLTATLEGRGRIPGLPDSWKPSKD-KICCDLFPVISPAYPYVNDASSVGRCGLEALYS 315
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS------AENADDLRNWK 306
E R + + + + ++EP+ E Y +L + +S AE L W
Sbjct: 316 EITR----VQCILTEARTLPLEEMWEPYRIEEEYSTFLVVGVSCAGHSMAETEQALSVWS 371
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK--------SKPLYCSYFMGLQRKQGV 358
+V SRLR L IERH Q P P K S L ++ +G++ K+G
Sbjct: 372 SYVASRLRILIYSIERHA----QARPCPRKIRPKKDNHVGGSSCFLSVNFLIGVKAKEGG 427
Query: 359 PVGEGEQFDIRLTVKEFKQAV 379
P + F EF AV
Sbjct: 428 PTPQPSLFT--EACGEFHHAV 446
>gi|7108951|gb|AAF36551.1|AF201909_1 polyA polymerase [Trypanosoma brucei]
Length = 487
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 177/381 (46%), Gaps = 42/381 (11%)
Query: 24 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVP--DAHVPVMKFKFSGVSIDL 81
+D+D + P T + FF E ++L + PV A VPV+KF++ G ++D+
Sbjct: 83 SDLDVALICPSVLT-TDIFFDEFPRLL-----YNSVGPVSVVAARVPVVKFEYRGTAVDV 136
Query: 82 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN-FRTTLRCM 140
++ + L P + + DS L +T S NG R T +I R +P + F L+ +
Sbjct: 137 VFVSVGLPQPPTEEQMLDDSFLLKVARETRPSANGIRFTFEIKRRLPVPYDVFTAVLKTV 196
Query: 141 RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN---- 196
+ WA RR VY NV + G A++VAR+CQ+ P++ PS L+ FF YTQW +
Sbjct: 197 KLWAMRRMVYGNVYTYPNGAVLAIMVARVCQVLPSSHPSTLLRFFFLFYTQWMSRHDRIS 256
Query: 197 PVLLCAIEEGS---LGL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
PV L A EG GL W P ++ K L P+I+PAYP +N + +V L +
Sbjct: 257 PVYLTATLEGRGRIPGLPDSWKPSKD-KICCDLFPVISPAYPYVNDASSVGRCGLEALYS 315
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS------AENADDLRNWK 306
E R + + + + ++EP+ E Y +L + +S AE L W
Sbjct: 316 EITR----VQCILTEARTLPLEEMWEPYRIEEEYSTFLVVGVSCAGHSMAETEQALSVWS 371
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK--------SKPLYCSYFMGLQRKQGV 358
+V SRLR L IERH Q P P K S L ++ +G++ K+G
Sbjct: 372 SYVASRLRILIYSIERHA----QARPCPRKIRLKKDNHVGGSSCFLSVNFLIGVKAKEGG 427
Query: 359 PVGEGEQFDIRLTVKEFKQAV 379
P + F EF AV
Sbjct: 428 PTPQPSLFT--EACGEFHHAV 446
>gi|261327018|emb|CBH09993.1| poly(A) polymerase [Trypanosoma brucei gambiense DAL972]
Length = 487
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 175/381 (45%), Gaps = 42/381 (11%)
Query: 24 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVP--DAHVPVMKFKFSGVSIDL 81
+D+D + P T + FF E ++L + PV A VPV+KF++ G ++D+
Sbjct: 83 SDLDVALICPSVLT-TDIFFDEFPRLL-----YNSVGPVSVVAARVPVVKFEYRGTAVDV 136
Query: 82 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN-FRTTLRCM 140
++ + L P + + DS L +T S NG R T +I R +P + F L+ +
Sbjct: 137 VFVSVGLPQPPTEEQMLDDSFLLKVARETRPSANGIRFTFEIKRRLPVPYDVFTAVLKTV 196
Query: 141 RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN---- 196
+ WA RR VY NV + G A++VAR+CQ+ P++ PS L+ FF YTQW +
Sbjct: 197 KLWAMRRMVYGNVYTYPNGAVLAIMVARVCQVLPSSHPSTLLRFFFLFYTQWMSRHDRIS 256
Query: 197 PVLLCAIEEGS---LGL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 252
PV L A EG GL W P ++ K L P+I+PAYP +N + +V L +
Sbjct: 257 PVYLTATLEGRGRIPGLPDSWKPSKD-KICCDLFPVISPAYPYVNDASSVGRCGLEALYS 315
Query: 253 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS------AENADDLRNWK 306
E R I + + W EP+ E Y +L + +S AE L W
Sbjct: 316 EITRVQCILTEVRTLPLEEMW----EPYRIEEEYSTFLVVGVSCAGHSMAETEQALSVWS 371
Query: 307 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK--------SKPLYCSYFMGLQRKQGV 358
+V SRLR L IERH Q P P K S L ++ +G++ K+G
Sbjct: 372 SYVASRLRILIYSIERHA----QARPCPRKIRLKKDNHVGGSSCFLSVNFLIGVKAKEGG 427
Query: 359 PVGEGEQFDIRLTVKEFKQAV 379
P + F EF AV
Sbjct: 428 PTPQPSLFT--EACGEFHHAV 446
>gi|224143336|ref|XP_002336029.1| predicted protein [Populus trichocarpa]
gi|222838985|gb|EEE77336.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 131/260 (50%), Gaps = 47/260 (18%)
Query: 264 MEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 323
+E N+A W LFEP+ FFEAYKNYL++DI A +A DL WKGWVESRLRQLTLK
Sbjct: 32 IELNKAQ--WSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLTLK---- 85
Query: 324 TYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT 383
RK+GV EG+QFDIR TV EF+Q ++MY
Sbjct: 86 ------------------------------RKEGVTGQEGQQFDIRETVDEFRQDINMYL 115
Query: 384 LRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRK 443
K GM I V+HV RR LP FVFP G + SRPS+ V+ A+ K
Sbjct: 116 PWKAGMDIYVSHVRRRQLPGFVFPDGYKRSRPSRHMNQQTNRTSEDVARSQSGSAERHVK 175
Query: 444 RKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNR 503
RK D + N K + SS+G R G +++++SS + ++ SN
Sbjct: 176 RKN-----DCEMANLKPSVSPSSSAG--RSG---VTSLASSCEGVILGRPTIGDIV-SNC 224
Query: 504 EKVENNLTDSIRGSRNSVEV 523
E V +N +S R S++V
Sbjct: 225 EDVASNSEESPLNQRTSMDV 244
>gi|427738965|ref|YP_007058509.1| poly(A) polymerase [Rivularia sp. PCC 7116]
gi|427374006|gb|AFY57962.1| poly(A) polymerase [Rivularia sp. PCC 7116]
Length = 1067
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 154/317 (48%), Gaps = 29/317 (9%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
LG + V P +D+D +C P + + +DF + Q L + E +L V DA VP+++
Sbjct: 722 LGSYRLGVESPESDLDVVCQIPTYLS-GDDFLKNVQQRLKGLCESIQL--VLDAKVPLLR 778
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK-- 129
K G+S+DLLY +D + S + ++ ++ GC D I V +
Sbjct: 779 LKLEGISLDLLYT---------GVDKNWASGINPKPTKSEMAIIGCWEADFIREFVQEYV 829
Query: 130 -IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP--NAVPSMLVSRFF 186
+F+ LR +R WAK R +Y N GFLGG++WALL A CQ + P L++ FF
Sbjct: 830 PFDSFQWLLRAVRAWAKSRRIYGNNWGFLGGLSWALLSAWSCQYCDKNHTQPDKLLANFF 889
Query: 187 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
Q+ W P+ A+ + V PR L+PIIT PC N++ N++ ST
Sbjct: 890 NHLNQYNWRQPI---ALTDAGKQYSVQVPR-------DLLPIITSIEPCQNTARNITRST 939
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
I+ EF R E+ + E ++DW +LFEP + +L + + + L
Sbjct: 940 AEILSGEFARATEMTQ--EIAAGNLDWSSLFEPINLQQESDIFLNLKLIGNDKQQLEKEC 997
Query: 307 GWVESRLRQLTLKIERH 323
G++E + L +++E H
Sbjct: 998 GYLEGYIISLIIQLENH 1014
>gi|154417414|ref|XP_001581727.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121915957|gb|EAY20741.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 467
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 189/383 (49%), Gaps = 31/383 (8%)
Query: 22 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 81
P +D+D + + P++ T + DFF ++ L P + E V +A VP++K + +S+D+
Sbjct: 91 PDSDVDVILIAPKYFTYK-DFFEGFYEELIRHPSIKETIKVENAFVPIIKTVCNDISVDI 149
Query: 82 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNG---CRVTDQILRLVPKIQNFRTTLR 138
+A L+ + ++L+ + + + + SLNG C + +++ P NF R
Sbjct: 150 SFAPLNNQIKIKNLNNIKKEDMDKLEPKAQLSLNGYLNCLLIRDLMKNHP---NFPYFTR 206
Query: 139 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 198
+R WA++R ++ N+ G+L GIN +++ A IC +PN SML+ FF ++ W W
Sbjct: 207 FIRNWAQKREIFGNLYGYLKGINISMMCAIICNQHPNCSLSMLIFHFFEYFSSWDWD--- 263
Query: 199 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 258
+ ++ + Q+ DP M ++T +YP +NS V+TS+ + ++ E QR
Sbjct: 264 IQLNLDSNTPDFQLNDP----------MILMTQSYPQINSLRAVTTSSRKRIIKELQRAL 313
Query: 259 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 318
E + + +D+ W LF+ FF Y+ +L ID+ N+ G++ S+L +L +
Sbjct: 314 ETTK--KALISDLSWQELFKGGCFFADYRYFLCIDLIPTNSQIKDEIIGFLSSKLTRL-V 370
Query: 319 KIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQA 378
KI + + + P S K + +++GL K G+ + DI F
Sbjct: 371 KILEEIPGICEANIWPSKISYGGKII---FYIGLNTKS----GQSKTIDINHAKNNFISY 423
Query: 379 VSMYTLRKPGMQISVAHVTRRNL 401
+S TL K M I+ + ++ L
Sbjct: 424 ISSSTLGK-AMSINFKIIRKKEL 445
>gi|71660695|ref|XP_822063.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70887456|gb|EAO00212.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 485
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 178/382 (46%), Gaps = 37/382 (9%)
Query: 3 RYLPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPV 62
R P GLG SV DI C E FF E +L P V + V
Sbjct: 67 RAYPFGSCGLGA---SVADSDLDIVLFC---SFKVTAEVFFREFPPLL--QPVVGNVVLV 118
Query: 63 PDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQ 122
P A VPV+KF +SG S+D+++ +L P + DS L T S+NG R +
Sbjct: 119 P-ARVPVVKFSYSGTSVDVVFVSAALAAPPTTEQLLDDSFLLQVARDTRHSVNGLRTVLE 177
Query: 123 ILRLVPKIQN-FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSML 181
+ R +P + F T L+ ++ WA RR VY N+ + G+ A++VARICQ+ P + P++L
Sbjct: 178 VKRRLPVAYDVFTTVLKSVKLWAMRRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVL 237
Query: 182 VSRFFRVYTQWR----WPNPVLLCAIEE--GSL-GL-QVWDPRRNPKDKYHLMPIITPAY 233
+ FF YTQW +PV + E G + GL WDPRR+ + L+P+I PAY
Sbjct: 238 LRFFFLFYTQWLSRHDRISPVYITTSLESRGRIPGLPDSWDPRRD-ACRDDLLPVINPAY 296
Query: 234 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 293
P +N + NV +L + E + + +E + ++EP+ + Y + +
Sbjct: 297 PYVNDARNVGRCSLEVFYAELTYAYRLLSNLET-----PLEAIWEPYHILDDYSTFFVVH 351
Query: 294 ISAENADD------LRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD---KSKPL 344
++ E ++ L W +V S+LR L +ER ++ P+P +D +S P
Sbjct: 352 VTCEEENEEKLEAVLSVWSSYVLSKLRILLYALER----IVDARPYPQKLNDGPPRSAPK 407
Query: 345 YCSYFMGLQRKQGVPVGEGEQF 366
+ G G+ G +F
Sbjct: 408 SGRFLKGSCFIVGIKEKVGRRF 429
>gi|405977001|gb|EKC41474.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 323
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 162/345 (46%), Gaps = 49/345 (14%)
Query: 194 WPNPVLLCAI---EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIM 250
WP PVLL ++ + +L VWDPR N D +HLMPIITP YP N+++ V+ S+ IM
Sbjct: 3 WPQPVLLKSLVHENKHNLSFPVWDPRVNTSDMFHLMPIITPTYPHENTTFTVTLSSRSIM 62
Query: 251 MDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVE 310
+E + G EI + E +W LFEP FF+ YK+YL + +S D W G+ E
Sbjct: 63 TEELKDGFEIVSKIY--EGREEWGALFEPSNFFQKYKHYLVLTVSTVEEKDYLEWHGYAE 120
Query: 311 SRLRQLTLKIERH-TYNMLQCHPHP-GDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 368
S+LR L +ER+ + HP P G ++ C +F+GL V + D+
Sbjct: 121 SKLRLLIGNLERNPCIKLAHVHPSPLGPLNESDDEHLCRWFIGL---TFVKIENQNFVDL 177
Query: 369 RLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSR 423
++ F KQA + L K GM++ + HV RR L +V P + S
Sbjct: 178 TFDIQSFTNTVHKQAYHI-NLMKDGMKVKIKHVKRRQLGLYVPPEILLQS---------- 226
Query: 424 RALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS--SSGEFREGSPIMSTI 481
++V++ +P + G K ++C+ T+ + S E EG+ + +I
Sbjct: 227 ----KRVAAAQEPTSSIGSASK------------SECNQTLHNTRSDTELVEGNWVPLSI 270
Query: 482 SSSSINLQFEHMDANEL--AGSNREKVENNLTDSIRGSRNSVEVS 524
S IN E + A + G+N + N + + R E+S
Sbjct: 271 HSFHIN---EDLVAGMIKNGGANVTRYNNTVRVCLFSHRTRPEIS 312
>gi|301087134|gb|ADK60784.1| nucleic acid binding protein [Arachis diogoi]
gi|301087263|gb|ADK60848.1| putative nucleic acid binding protein, partial [Arachis diogoi]
Length = 74
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/74 (81%), Positives = 66/74 (89%)
Query: 161 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 220
N ALLVAR+CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC IEE LG VWDPR+NP+
Sbjct: 1 NLALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEENELGFSVWDPRKNPR 60
Query: 221 DKYHLMPIITPAYP 234
D+ H MPIITPAYP
Sbjct: 61 DRTHHMPIITPAYP 74
>gi|340052780|emb|CCC47065.1| putative polynucleotide adenylyltransferase [Trypanosoma vivax
Y486]
Length = 486
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 158/333 (47%), Gaps = 30/333 (9%)
Query: 24 ADIDTLCVGPRHATREEDFFGELHQML-TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 82
+D+D + P T FF E +L T + V V A VPV+KF G +DL+
Sbjct: 83 SDLDIVLFCPFKVT-AAVFFHEFPLLLQTVVGHVI----VVAARVPVVKFAHEGTLVDLV 137
Query: 83 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN-FRTTLRCMR 141
+ ++L P + DS L +T S+NG R T +I R +P + F T L+ ++
Sbjct: 138 FVSVALAAPPTTEQLLDDSFLLQVARETRHSVNGIRFTLEIKRRLPVTYDVFSTVLKVVK 197
Query: 142 FWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN----P 197
WA +R VY N+ + G+ A++VAR CQ+ P + P++++ FF YTQW + P
Sbjct: 198 LWAMKRQVYGNLYTYPSGVVLAIMVARACQVMPASHPNVVLRFFFLFYTQWMSRHDRISP 257
Query: 198 VLLCAIEEGSLGL----QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 253
V + +G + + WDP K + L+P++ PAYP +N + V L + E
Sbjct: 258 VYITTSLQGRGRVPGMPEPWDPALE-KFSHDLLPVLNPAYPFVNDANAVGRCGLEVFYSE 316
Query: 254 FQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAEN------ADDLRNWKG 307
R H + E + W +P++ + + ++L + +S + +DL W
Sbjct: 317 VTRAHHLLSTTESFPLEDVW----KPYSITDDFSSFLLVQVSCDGNSEEGVENDLEVWSS 372
Query: 308 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 340
+V S+LR L +E ++ P+P D+
Sbjct: 373 YVASKLRILIYAVE----CIVDARPYPHKLKDR 401
>gi|146093287|ref|XP_001466755.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|134071118|emb|CAM69802.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
Length = 500
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 184/382 (48%), Gaps = 39/382 (10%)
Query: 23 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 82
G+DID + + A+ FF + E + ++ V A VP++KF ++GV +DLL
Sbjct: 83 GSDIDLIALC--SASVNTSFFFQTFPRSAE-GRLQDVVVVTSARVPLIKFSYNGVHVDLL 139
Query: 83 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP-KIQNFRTTLRCMR 141
+A + + P+ ++ +D L ++NG R +I R +P + + LR ++
Sbjct: 140 FASVDMRTAPDTNELLRDDFLSLVSLPCRATVNGIRTILEIRRRLPLPLDAYACVLRAVK 199
Query: 142 FWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN----P 197
+WA +R VY N+ F G+ A++VAR CQL P A +++ FF +Y W + P
Sbjct: 200 YWAAQRQVYGNLYTFPNGVCLAIMVARACQLCPVADSGVILRFFFSLYVWWLLRDTRIAP 259
Query: 198 VLLCAIEEGSLGLQV------WDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 251
V + +E + +V WD + D L P++ PA P +N+++ V S L++ +
Sbjct: 260 VSIVPTDENAAIARVPGMPPPWDAVWDAAD---LFPVLNPARPTVNAAHAVGRSGLQLFL 316
Query: 252 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA------DDLRNW 305
E R ++C + + + L+EP+ + ++ ++ + IS+E+ D + W
Sbjct: 317 KELLRAEQLCALVP-----MSYSALWEPYNILDEHRFFVGVHISSEHQSLAACEDTINAW 371
Query: 306 KGWVESRLRQLTLKI----ERHTYNMLQCHPHPGDFSDKSKPLYC---SYFMGLQRKQGV 358
KG+VES+LR + E ++ P + + ++C ++F G++
Sbjct: 372 KGYVESKLRMFVYALECVAEVRPFSRPVVDEPPRVVTRRGVKVHCRSRAFFFGVRNGN-- 429
Query: 359 PVGEGEQFDIRLTVKEFKQAVS 380
+ E D+ +EF+ AV+
Sbjct: 430 --KDVEHSDVEAAFREFEFAVT 449
>gi|401415606|ref|XP_003872298.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488522|emb|CBZ23768.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 500
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 168/347 (48%), Gaps = 44/347 (12%)
Query: 62 VPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTD 121
V A VP++KF ++GV +DLL+A + + P+ ++ +D L ++NG R
Sbjct: 119 VTSARVPLIKFSYNGVHVDLLFASVDMRTAPDTNELLRDDFLSLVSLPCRATVNGIRTIL 178
Query: 122 QILRLVP-KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 180
+I R +P + + LR +++WA RR VY N+ F G+ A++VAR CQL P A S+
Sbjct: 179 EIRRRLPLPLDAYACVLRAVKYWAARRQVYGNLYTFPNGVCLAIMVARACQLCPVADSSV 238
Query: 181 LVSRFFRVYTQWRW----PNPVLLCAIEEGSLGLQV------WDPRRNPKDKYHLMPIIT 230
++ FF +Y W +PV + +E +V WD + D L P++
Sbjct: 239 ILRFFFSLYVWWLQRGTRIDPVSIVPTDENVAIARVPGMPPPWDAVWDAAD---LFPVLN 295
Query: 231 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 290
PA P +N+++ V S L++ + E R ++C + + + L+EP+ + ++ ++
Sbjct: 296 PARPTVNAAHAVGRSGLQLFLKELLRAEQLCSLVP-----MPYSALWEPYNVLDEHRFFV 350
Query: 291 RIDISAENA------DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD----- 339
+ IS+E+ D + WKG+VES+LR +E + + P P D
Sbjct: 351 GVHISSEHQSLAACEDTINAWKGYVESKLRMFVYALE----CVAEVRPFPCPVVDEPPRA 406
Query: 340 ---KSKPLYC---SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS 380
+ ++C ++F G++ + D+ +EF+ AV+
Sbjct: 407 VTRRGVTVHCRSRAFFFGVRNGN----KDVAHSDVESAFREFEFAVT 449
>gi|154341292|ref|XP_001566599.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063922|emb|CAM40113.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 417
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 157/315 (49%), Gaps = 34/315 (10%)
Query: 49 MLTEMPEVTE-----LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 103
++P +TE + V A VP++KF + GV +DLL+A + + P+ ++ +D L
Sbjct: 18 FFQKLPRLTEGRLQDVVVVTSARVPLIKFSYKGVHVDLLFASVDMRTAPDTSELLRDDFL 77
Query: 104 QNADEQTVRSLNGCRVTDQILRLVP-KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 162
++NG R +I R +P + ++ LR +++WA +R VY N+ F G+
Sbjct: 78 SLVSLPCRATVNGIRTILEIRRRLPLPLDSYACVLRAVKYWAAQRQVYGNLYTFPNGVCL 137
Query: 163 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRW----PNPVLLCAIEEGSLGLQV------ 212
A++VAR CQ P A +++ FF +Y W +PV + EE + ++V
Sbjct: 138 AIMVARACQFCPVADSGVILRFFFSLYVWWLLRDTRMDPVSIVPKEEDAAIVRVPGMPPP 197
Query: 213 WDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD 272
WD + D L P++ PA P +N+++ V S L++ E R ++C ++ +
Sbjct: 198 WDAVWDAAD---LFPVLNPAQPTVNAAHAVGRSGLQLFFKELLRAEQLCASVP-----LS 249
Query: 273 WDTLFEPFTFFEAYKNYLRIDISAENA------DDLRNWKGWVESRLRQLTLKIERHTYN 326
+ L++P+ + ++ ++ + IS E+ D + WKG+VES+LR L +E
Sbjct: 250 YSELWKPYNILDEHRFFVGVHISCEHPSLAACEDTINAWKGYVESKLRMLVYSLE----C 305
Query: 327 MLQCHPHPGDFSDKS 341
+ + P P D+S
Sbjct: 306 VAEVRPFPRPVVDES 320
>gi|320166045|gb|EFW42944.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1251
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 154/333 (46%), Gaps = 45/333 (13%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 72
G + V +D+D LC+GP + + +++ E + + PV DA VP++K
Sbjct: 828 GSHQLGVDTSDSDLDVLCLGPHSLSLDAFQAAAVNEF--EAIGLRSVRPVCDALVPLVKL 885
Query: 73 KF-SGVSIDLLYARLSLWVIPEDLDIS------QDSILQNADEQTVRSLNGCRVTDQILR 125
F SG DLLY RL P D + + L+ D +L G D ++
Sbjct: 886 VFRSGAEADLLYVRL-----PADAHLPCTPAQIKPRSLKAMDSTAQLTLQGWLENDALVN 940
Query: 126 LVPK--IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR-ICQLYPNAV----- 177
+P+ + FR+ LR ++ WA RG+YSN AGFLGG +W++LVA + + P+ +
Sbjct: 941 AIPQPLLSTFRSLLRRVKQWALARGIYSNAAGFLGGFSWSVLVAHFMVKTKPSPLGDEDQ 1000
Query: 178 -----PSM-LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY--HLMPII 229
P + L+ FF W WP P+LL +L P D +MP++
Sbjct: 1001 DSTGRPLLALMHAFFVHVANWPWPQPILLNMPLGATL----------PADAIGESVMPVM 1050
Query: 230 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 289
TP +P NS+ VS STL +M E QRG ++ A AD + +P K
Sbjct: 1051 TPTWPTRNSARVVSVSTLSVMRAELQRGADLTAA-----ADCSLAAVADPLGVSTLAKGI 1105
Query: 290 LRIDISAENADDLRNWKGWVESRLRQLTLKIER 322
L + + N +L GW+ SRL L ++ER
Sbjct: 1106 LVVQLQCLNKSELERGAGWLLSRLGVLVHELER 1138
>gi|434384462|ref|YP_007095073.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
gi|428015452|gb|AFY91546.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
Length = 1037
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 173/355 (48%), Gaps = 36/355 (10%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDF--FGELHQMLTEMPE---VTELHPVPDAH 66
LG + V +D+D +C+ P + T E + Q L + PE V DA
Sbjct: 643 LGSARLGVASSTSDLDVVCLIPDYLTGESFLTRVADCLQGLCDSPEERLCQRSQVVLDAK 702
Query: 67 VPVMKFKFSGVSIDLLYARLSL---WVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQI 123
PV++ + G+S+DLLY ++++ W D+ + + +S+ GC D I
Sbjct: 703 YPVLRLEIEGISLDLLYTQVAVSDGWETRNIRDL-------RSQIKDTKSIVGCWEADLI 755
Query: 124 LRLVP---KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY--PNAVP 178
+ LV +++ F+ L+ +R WAK RG+Y N GFLGG +W+LL A C Y P+
Sbjct: 756 VDLVKQQLRLERFQMLLKAVRSWAKVRGLYGNSWGFLGGFSWSLLCAYTCIDYRGPDKSL 815
Query: 179 SMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNS 238
+ L++ FF++ +Q W + L LG Q + P+D L+PII+ PC N+
Sbjct: 816 AALLANFFQILSQHNWRQTIALT-----ELGKQ--HQVKLPQD---LLPIISSIEPCKNT 865
Query: 239 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAEN 298
+ N++ ST +I+ DEF R EI + + W +L+EP L I+I +
Sbjct: 866 ARNITRSTAKILRDEFARAAEISTNILVGKD--AWTSLYEPIDLTIGTNALLSIEILDTD 923
Query: 299 ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQ 353
+ +ES + LT+++E+ + P+P + +SK ++ + F+ L+
Sbjct: 924 EQCRQKCSDLLESTIIGLTIQLEQLDVFV---RPNPQISTSESKSIF-TLFLQLR 974
>gi|389594193|ref|XP_003722343.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
gi|321438841|emb|CBZ12601.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
Length = 500
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 168/347 (48%), Gaps = 44/347 (12%)
Query: 62 VPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTD 121
V A VP++KF ++GV +DLL+A + + P+ ++ +D L ++NG R
Sbjct: 119 VTSARVPLIKFSYNGVHVDLLFASVDMRTAPDTNELLRDDFLSLVSLPCRATVNGIRTIL 178
Query: 122 QILRLVPKI-QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 180
+I R +P + + LR +++WA +R VY N+ F G+ A++VAR CQL P A +
Sbjct: 179 EIRRRLPLLLAAYACVLRAVKYWAAQRQVYGNLYTFPNGVCLAIMVARACQLCPVADSGV 238
Query: 181 LVSRFFRVYTQWRWPN----PVLLCAIEEGSLGLQV------WDPRRNPKDKYHLMPIIT 230
++ FF +Y W + PV + ++E + +V WD + D L P++
Sbjct: 239 ILRFFFSLYVWWLLRDTRIAPVSIVPMDENAAIARVPGMPPPWDAVWDAAD---LFPVLN 295
Query: 231 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 290
PA P +N+++ V S L++ + E R ++C + + + L+ P+ + ++ ++
Sbjct: 296 PARPTVNAAHAVGRSGLQLFLKELLRAEQLCALVP-----MSYSALWAPYNILDEHRFFV 350
Query: 291 RIDISAENA------DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD----- 339
+ IS+E+ + + WKG+VES+LR +E + + P P D
Sbjct: 351 GVHISSEHQSLAACEEAINAWKGYVESKLRMFVYALE----CVAEVRPFPRPVVDEPPRA 406
Query: 340 ---KSKPLYC---SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS 380
+ ++C ++F G++ + D+ +EF+ AV+
Sbjct: 407 VTRRGVTVHCRSRAFFFGVRNGN----NDVAHSDVEAAFREFEFAVT 449
>gi|110740407|dbj|BAF02098.1| poly(A) polymerase like protein [Arabidopsis thaliana]
Length = 348
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 114/214 (53%), Gaps = 6/214 (2%)
Query: 311 SRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMGLQRKQGVPVGEGEQFDIR 369
SR RQLTLKIER T ML CHP P ++ D ++ L+C++FMGLQR +GV E +QFDIR
Sbjct: 1 SRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQFDIR 60
Query: 370 LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK-GTWDSRRALER 428
TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R R S+ ++ E
Sbjct: 61 GTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKSGED 120
Query: 429 KVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEF--REGSPIMSTISSSSI 486
SH+ + KRK + +D + A++ S + E S I + +
Sbjct: 121 GSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSAITTGWTPPVC 180
Query: 487 NLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 520
NL+ + E N E E LTD R NS
Sbjct: 181 NLRRPPSEEIEADNLNTECTE--LTDLARNECNS 212
>gi|297597453|ref|NP_001043998.2| Os01g0702900 [Oryza sativa Japonica Group]
gi|222619129|gb|EEE55261.1| hypothetical protein OsJ_03164 [Oryza sativa Japonica Group]
gi|255673599|dbj|BAF05912.2| Os01g0702900 [Oryza sativa Japonica Group]
Length = 129
Score = 129 bits (323), Expect = 6e-27, Method: Composition-based stats.
Identities = 64/110 (58%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQ--DSILQNADE-QTVRSLNGCRVTDQILRLVPK 129
+F GV +DL+YA + L P Q S+L+ D+ T RSLNG RV D+ILRLVP+
Sbjct: 2 RFRGVQVDLVYAGVCLPWCPTTWSGPQCDRSVLRGLDDLATARSLNGIRVADEILRLVPE 61
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 179
FRT LRC++ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYPN P+
Sbjct: 62 TAVFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPA 111
>gi|294888316|ref|XP_002772423.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239876612|gb|EER04239.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 113
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 77/109 (70%), Gaps = 4/109 (3%)
Query: 156 FLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI----EEGSLGLQ 211
F GGI WA+LVAR+CQ++PN LV RFF + ++W W NPV LC I E G + +
Sbjct: 1 FFGGITWAILVARVCQMFPNMQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFK 60
Query: 212 VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEI 260
VW+P++ D+ HLMP+ITPA+P MNS+YNV+ +T RI+M E +R H++
Sbjct: 61 VWNPKQYASDRSHLMPVITPAFPSMNSTYNVTETTKRIIMGEIERAHKL 109
>gi|342180300|emb|CCC89777.1| putative polynucleotide adenylyltransferase [Trypanosoma congolense
IL3000]
Length = 356
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 145/297 (48%), Gaps = 32/297 (10%)
Query: 77 VSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN-FRT 135
+S+D+++ ++L P + DS L T S+NG R T ++ R +P F T
Sbjct: 1 MSVDVVFISVALSQPPTSDQLLDDSFLLQVARDTRPSVNGIRFTFEVRRRLPVPHKVFAT 60
Query: 136 TLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWR-- 193
L+ ++FWA RR VY N+ + G +A++VAR+CQ+ P+ PS+L+ FF YTQW
Sbjct: 61 VLKAVKFWAMRRQVYGNIYTYPNGAVFAIMVARVCQVLPSPYPSVLLRFFFLFYTQWMSR 120
Query: 194 --WPNPVLLCAIEE--GSL-GL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 247
+PV L A E G + GL + W P +N + L P+I+PAYP +N + NV L
Sbjct: 121 HDHISPVYLTATLESRGRIPGLPESWKPAKNECFR-DLFPVISPAYPYVNDASNVGRCGL 179
Query: 248 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENAD------D 301
+ E + + A + + + L+ P+ E + ++L +++S+ D
Sbjct: 180 ESLYSEITQAQRVISASDT----LSLEKLWRPYCIMEDFAHFLLVEVSSLGDDMADAERI 235
Query: 302 LRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP--------GDFSDKSKPLYCSYFM 350
L W +V S+LR L +ER + PHP G F D+ YF+
Sbjct: 236 LGRWGSYVGSKLRFLIYSVER----FVHARPHPHKLRAKMDGTFVDRKVCCSSIYFL 288
>gi|358333281|dbj|GAA51822.1| poly(A) polymerase [Clonorchis sinensis]
Length = 426
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 138/286 (48%), Gaps = 41/286 (14%)
Query: 79 IDLLYARLSLWVIPEDLDISQD--SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTT 136
+DL+ +RL+ IP+ LD Q + +N D +VRSL+G + ++ +++ +F
Sbjct: 51 VDLVISRLATSYIPQQLDFEQTPGDLYRNMDAISVRSLSGLHLAHELNKMMFGHAHFLPL 110
Query: 137 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ-LYPNAVPSM--------------- 180
LR +R W + R + S V GF I W ++V IC+ L N+ S
Sbjct: 111 LRVIRTWVRARAIGSYVYGFPASIAWTIMVVYICRRLGDNSQISTFCVCRRSSVCRTSEP 170
Query: 181 --------------------LVSRFFRVYTQWRWPNPVLLCAIEEGS-LGLQVWDPRRNP 219
LV FF + W WP+PV + +I+ S L + WDP+RN
Sbjct: 171 AAERNSGEESLASRSHALFCLVYTFFAQFASWPWPHPVQIASIKFASDLNIFSWDPQRNA 230
Query: 220 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 279
+D LMPI+TP +P N+++ V +T +I+ DE R +I + + W+ LFE
Sbjct: 231 QDGRDLMPILTPVFPNKNAAFTVRQATRKIVTDELIRARDIVSDVLRGSG--TWEKLFER 288
Query: 280 FTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY 325
+ + ++++L + + + ++L G ++SRLR L +E Y
Sbjct: 289 YDLRDDHRHFLLLTLQTTSKEELVVVGGLIDSRLRDLAQALEDEQY 334
>gi|300123436|emb|CBK24709.2| unnamed protein product [Blastocystis hominis]
Length = 363
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 159/332 (47%), Gaps = 33/332 (9%)
Query: 65 AHVPVMKFKFSGVSIDLLYARLSLW--VIPEDLDISQDSILQNADEQTVRSLNGCRVTD- 121
+ VP+M + GVS+D+ +A L + +PE LDI + IL+N E T+ SL GCR T+
Sbjct: 6 SFVPIMTMEIDGVSVDISFASLPSYPFKLPEFLDILSNDILRNVSEHTLHSLTGCRCTEF 65
Query: 122 --QILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL------- 172
Q LR K+ FR T +RF+ K+ +Y NV G+LGG+N +L+A L
Sbjct: 66 VIQKLRSENKLDIFRQTFFGIRFFTKQYKIYKNVMGYLGGVNITILLASTNLLENDFLTN 125
Query: 173 ---YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 229
+ + V L S + Q +P E + W + + + + ++
Sbjct: 126 TFHFFHFVADHLGSEIIAMTPQLSFP---------ELGFDEENWSDKPSNFSNHDSLVLL 176
Query: 230 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 289
TP YP MN++ +S S+L+ + + +R +E ++ E+ + + EP+ FFE + Y
Sbjct: 177 TPTYPRMNTARTISRSSLQFIRSQARRVYEKIKSYVDGESTL--LQMVEPYQFFEGFPIY 234
Query: 290 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYF 349
+ +SA + ++W G VES++R L + N+ +P+P KS ++
Sbjct: 235 FEVLVSASANSEFKDWLGLVESKIRYLVFFLSLRIENV-ALNPNP--IVSKSNSNAACFY 291
Query: 350 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSM 381
+GL V + + D+ V +F V +
Sbjct: 292 IGL----TVDLTKATTLDLSQCVNDFIDIVRL 319
>gi|403331436|gb|EJY64664.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 1239
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 145/358 (40%), Gaps = 104/358 (29%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + H P D+D +CV P + + DFF + ++T EVT + V DA VPV+K
Sbjct: 168 FGSYELQAHFPETDMDVICVLPSYILHD-DFFNKFKNLITSYEEVTNVIDVVDARVPVLK 226
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
FKF G ID+LYA + +I + I PK+
Sbjct: 227 FKFQGFQIDMLYACIDYKLIENNPKI------------------------------PKM- 255
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
K +++ ++ GG+++A+LVA+ICQ + ++ +FF VY
Sbjct: 256 ------------IKDETIFNKLSQ--GGVSYAILVAKICQDNTDLYLCDIIYKFFEVYAD 301
Query: 192 WRWPNPVLL------CAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 245
W+W +PV + + LQV D +MPI+TP NS+Y V +
Sbjct: 302 WKWFDPVFIRVGKKKDKTKLDLNKLQVLDAYSQD-----IMPILTPNTNPKNSAYRVCSH 356
Query: 246 TLRIMMDEFQRGHEICEAM----------------------------------------- 264
T + EF RG + + +
Sbjct: 357 TFDTICKEFTRGKNLMKELIPQSQKTIKPHPAALAKLALDQEETKLTVDALQIQESNQES 416
Query: 265 ------EKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL 316
+K + W LF+ F FF+ Y+++L+IDI + + W G+VES+LR+L
Sbjct: 417 QVQSPVQKQKQKQSWIKLFQKFRFFDQYEHFLKIDILSTDESAHLKWLGYVESQLRRL 474
>gi|413936469|gb|AFW71020.1| hypothetical protein ZEAMMB73_643504 [Zea mays]
Length = 388
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 65/79 (82%)
Query: 19 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 78
VHGP ADIDTLCVGPRHATR E FF LH +L EMPEV+ELHPVPDAHVPV+ FK +GVS
Sbjct: 235 VHGPDADIDTLCVGPRHATRNEYFFRWLHDILAEMPEVSELHPVPDAHVPVLGFKINGVS 294
Query: 79 IDLLYARLSLWVIPEDLDI 97
IDLLYA L+ VIPE +I
Sbjct: 295 IDLLYANLAHAVIPESREI 313
>gi|125527403|gb|EAY75517.1| hypothetical protein OsI_03421 [Oryza sativa Indica Group]
Length = 129
Score = 125 bits (313), Expect = 9e-26, Method: Composition-based stats.
Identities = 63/110 (57%), Positives = 76/110 (69%), Gaps = 3/110 (2%)
Query: 73 KFSGVSIDLLYARLSLWVIPEDLDISQD--SILQNADE-QTVRSLNGCRVTDQILRLVPK 129
+F GV +DL+YA + L P Q S+L+ D+ T SLNG RV D+ILRLVP+
Sbjct: 2 RFRGVQVDLVYAGVCLPWCPTTWSGPQRDRSVLRGLDDLATAHSLNGIRVADEILRLVPE 61
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 179
FRT LRC+ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYPN P+
Sbjct: 62 TAMFRTMLRCVNHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPA 111
>gi|261265299|gb|ACX55867.1| polyA polymerase [Bubalus bubalis]
Length = 83
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 65/83 (78%)
Query: 156 FLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP 215
FLGG++WA+LVAR CQLYPNA+ S LV +FF V +W WPNPVLL EE +L L VWDP
Sbjct: 1 FLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVSPKWEWPNPVLLKQPEECNLNLPVWDP 60
Query: 216 RRNPKDKYHLMPIITPAYPCMNS 238
R NP D+YHLMPIITPAYP NS
Sbjct: 61 RVNPSDRYHLMPIITPAYPQQNS 83
>gi|242051340|ref|XP_002463414.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
gi|241926791|gb|EER99935.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
Length = 460
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 41/261 (15%)
Query: 12 LGYDKYSV--HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 69
L Y Y++ HGP +DID LCVGP AT + FF L Q+L PEV+EL + A VP+
Sbjct: 144 LTYGSYTLGAHGPESDIDVLCVGPCIATLQYHFFVVLRQLLEGRPEVSELQTIEKAKVPL 203
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 129
M+F+F+G+++D YA+L ++
Sbjct: 204 MRFRFTGIAVDFTYAQLP--------------------------------------VIDA 225
Query: 130 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 189
++ F+ LRC++ WA++RG++ + GF GI+ A+L A +C+ +P+A + L + FF+ +
Sbjct: 226 LKKFQALLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASVNGLFAVFFQTF 285
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
W W P L + + + + P ++ + + P + + S R+
Sbjct: 286 AHWPWQVPDSLRHDFQWTWLFEPF-PYDKKYQQFLRIALCAPTFAELRDWAGWVKSRFRL 344
Query: 250 MMDEFQRGHEICEAMEKNEAD 270
++ + +R C+ E D
Sbjct: 345 LILKLERAGIECDPCPSEEVD 365
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 270 DVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ 329
D W LFEPF + + Y+ +LRI + A +LR+W GWV+SR R L LK+ER ++
Sbjct: 299 DFQWTWLFEPFPYDKKYQQFLRIALCAPTFAELRDWAGWVKSRFRLLILKLERAG---IE 355
Query: 330 CHPHPGDFSDKS 341
C P P + D +
Sbjct: 356 CDPCPSEEVDHT 367
>gi|308507393|ref|XP_003115880.1| hypothetical protein CRE_18491 [Caenorhabditis remanei]
gi|308256415|gb|EFP00368.1| hypothetical protein CRE_18491 [Caenorhabditis remanei]
Length = 311
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 100/216 (46%), Gaps = 56/216 (25%)
Query: 112 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 171
+ LNG RV +Q+L VP F +LR ++ WAK GVYSN GF GGI WA+LVAR CQ
Sbjct: 70 KILNGIRVAEQLL--VPNRDTFCQSLRAIKLWAKNHGVYSNAMGFFGGITWAILVARTCQ 127
Query: 172 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 231
LYPNA PS ++ + F V++ W WP+PV+L
Sbjct: 128 LYPNAAPSKIIQKVFLVFSTWNWPSPVIL------------------------------K 157
Query: 232 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 291
+ C++S +TL I+ E + +IC ++K A W+ L F F
Sbjct: 158 HFDCVDSK-----TTLHIIQKEMKAALKICNRIQKGNA--TWNDLANWFRFSRGIG---- 206
Query: 292 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNM 327
I ENA +L LTLKIE NM
Sbjct: 207 -KIFMENAKNL------------DLTLKIEGFKRNM 229
>gi|440789896|gb|ELR11187.1| EGFlike domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 904
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 27/204 (13%)
Query: 148 GVYSNVAGFLGGINWALLVARICQ---LYPNAVPSM-----------LVSRFFRVYTQWR 193
G+YSN GFLGG +W++LVA +C+ LY + + L++ FF VY W
Sbjct: 693 GLYSNAVGFLGGFSWSVLVAYVCKNSKLYAKSAAAASGDGDLSIEERLLAEFFEVYNHWD 752
Query: 194 WPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 253
W PV AI GS R P K MPI+TP P NS+ NV+ STL M E
Sbjct: 753 WQQPV---AITPGS-------ARYKPGHKSDKMPIVTPTPPFNNSARNVARSTLTEMQQE 802
Query: 254 FQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 313
F R +I +A + N ++ + L +P FF+ Y YL +++ + ++D++ GW+ESRL
Sbjct: 803 FFRAFDITQAPQWN-SEAGLNDLLQPTNFFKDYHYYLMVEVHSLSSDEVTKCLGWLESRL 861
Query: 314 RQLTLKIERHTYNMLQCHPHPGDF 337
L +E++ + P PG F
Sbjct: 862 IALIFDLEKNPQTYAR--PFPGTF 883
>gi|402576343|gb|EJW70302.1| hypothetical protein WUBG_18790, partial [Wuchereria bancrofti]
Length = 79
Score = 116 bits (291), Expect = 3e-23, Method: Composition-based stats.
Identities = 47/76 (61%), Positives = 59/76 (77%)
Query: 117 CRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA 176
CRV D+ILRLVP I NF LR ++ WAK G+YSNV G+LGG++WA+LVAR CQLYPN
Sbjct: 1 CRVADEILRLVPNISNFTYALRAIKLWAKNHGIYSNVLGYLGGVSWAILVARTCQLYPNT 60
Query: 177 VPSMLVSRFFRVYTQW 192
P+ LV +FF +YT+W
Sbjct: 61 GPARLVQKFFLLYTKW 76
>gi|349603143|gb|AEP99064.1| Poly(A) polymerase gamma-like protein, partial [Equus caballus]
Length = 435
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 113/194 (58%), Gaps = 13/194 (6%)
Query: 221 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 280
D+YHLMPIITPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP
Sbjct: 1 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPP 58
Query: 281 TFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDF 337
FF+ Y++Y+ + SA ++ W G VES++R L +ER+ + + +P PG+
Sbjct: 59 NFFQKYRHYIVLTASASTEENHSEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNK 118
Query: 338 SDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQI 391
Y S +F+G+ ++ V E D+ ++ F +QA ++ L++ GM+I
Sbjct: 119 EHHKDNNYVSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKE-GMKI 176
Query: 392 SVAHVTRRNLPNFV 405
HV ++ L +++
Sbjct: 177 EATHVKKKQLHHYL 190
>gi|238492513|ref|XP_002377493.1| poly(A) polymerase pla1, putative [Aspergillus flavus NRRL3357]
gi|220695987|gb|EED52329.1| poly(A) polymerase pla1, putative [Aspergillus flavus NRRL3357]
Length = 1297
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 168/370 (45%), Gaps = 39/370 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM--PEVTELHPVPDAH 66
++ +G + V +D+D L +G FF + L +V L V A
Sbjct: 638 VVAVGSYGFGVWNSSSDMDILVIG---QVSPRTFFALMIAKLRRATDSDVVLLRKVKAAS 694
Query: 67 VPVMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 124
+++ + GV +DL Y + V P+ L++ D + Q++ LN R +
Sbjct: 695 GIMLELEVRGVRVDLQYCAATRVVESWPQALELPADHSTFDLPMQSLLKLNSLRDMHYLQ 754
Query: 125 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM---- 180
R +P + +FR R ++ WA+RRG+YS+ G+LGGI+ LL+ARIC L ++
Sbjct: 755 RTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAAD 814
Query: 181 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY 240
+++ FF+ Y Q+ W V+ S + + P+R P + I++ P +N +
Sbjct: 815 IITTFFKHYAQFNWEKQVVYDPSFYKS-PPRYFRPQREP------LVILSQHQPKVNVAR 867
Query: 241 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL---FEPFT----FFEAYKNYLRID 293
S + R ++ EFQR ++ ++ DV W+ L E T F ++Y++Y +++
Sbjct: 868 AASIPSTRTLVQEFQRADKLL-----SQQDVTWEQLAGSIENSTGADEFLKSYRSYAKVN 922
Query: 294 IS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD------KSKPLY 345
+ A R GW+E R L + I R + + P F+D +K
Sbjct: 923 VQYWGGAATKGRMLVGWLEWRCVSLLVDIHRK-FPDIHARIWPARFTDMEEVGETTKEYQ 981
Query: 346 CSYFMGLQRK 355
Y +GL R+
Sbjct: 982 GCYLIGLTRE 991
>gi|317156627|ref|XP_001825892.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
Length = 1195
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 168/370 (45%), Gaps = 39/370 (10%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM--PEVTELHPVPDAH 66
++ +G + V +D+D L +G FF + L +V L V A
Sbjct: 638 VVPVGSYGFGVWNSSSDMDILVIG---QVSPRTFFALMIAKLRRATDSDVVLLRKVKAAS 694
Query: 67 VPVMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 124
+++ + GV +DL Y + V P+ L++ D + Q++ LN R +
Sbjct: 695 GIMLELEVRGVRVDLQYCAATRVVESWPQALELPADHSTFDLPMQSLLKLNSLRDMHYLQ 754
Query: 125 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM---- 180
R +P + +FR R ++ WA+RRG+YS+ G+LGGI+ LL+ARIC L ++
Sbjct: 755 RTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAAD 814
Query: 181 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY 240
+++ FF+ Y Q+ W V+ S + + P+R P + I++ P +N +
Sbjct: 815 IITTFFKHYAQFNWEKQVVYDPSFYKS-PPRYFRPQREP------LVILSQHQPKVNVAR 867
Query: 241 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL---FEPFT----FFEAYKNYLRID 293
S + R ++ EFQR ++ ++ DV W+ L E T F ++Y++Y +++
Sbjct: 868 AASIPSTRTLVQEFQRADKLL-----SQQDVTWEQLAGSIENSTGADEFLKSYRSYAKVN 922
Query: 294 IS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD------KSKPLY 345
+ A R GW+E R L + I R + + P F+D +K
Sbjct: 923 VQYWGGAATKGRMLVGWLEWRCVSLLVDIHRK-FPDIHARIWPARFTDMEEVGETTKEYQ 981
Query: 346 CSYFMGLQRK 355
Y +GL R+
Sbjct: 982 GCYLIGLTRE 991
>gi|334121414|ref|ZP_08495483.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
gi|333455032|gb|EGK83696.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
Length = 1034
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 160/365 (43%), Gaps = 55/365 (15%)
Query: 6 PLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDA 65
P +L +G + V +D+D +C+ P T E F ++ L + + ++L V A
Sbjct: 629 PPLLQQIGSGRIGVQSTHSDLDLICIIPVPLT-GETFLKQVQNRLAGLCDRSQL--VKSA 685
Query: 66 HVPVMKFKFSGVSIDLLYAR-LSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 124
VPV++ + GV++DLL A + I E L + D + + G D I+
Sbjct: 686 RVPVLRMEIEGVAVDLLSATTMGQSQIIEPLSEAARPFF---DAASWSAAVGILEADLIV 742
Query: 125 RLV-PKIQ--NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA-------------- 167
+V P + F LR +R WAK R ++ N GFLG +WALL A
Sbjct: 743 DIVSPHLSWDLFTNLLRAVRTWAKARQIHGNAWGFLGNFSWALLTAWTSIQCGDITPDSP 802
Query: 168 RICQ-----------------LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGL 210
R+ L + + +L++ FF++ +Q W P+ A+ EG G
Sbjct: 803 RLLHSQENDGFVGAVSPCPPCLRDDQLLDILLAHFFQILSQHDWTQPI---ALTEG--GK 857
Query: 211 QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEAD 270
Q P R ++ + P+IT PC NS+ NV+ ST I+ E RG EI E E +
Sbjct: 858 QY--PVRKSREWF---PVITSIEPCQNSTRNVTRSTAEILRRELGRGAEIAE--EVLAGN 910
Query: 271 VDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQC 330
W TLFE E +L + +S+ +L GW+E L + +E+ +
Sbjct: 911 TAWTTLFESADLPEQSNAFLVLTVSSAEVGELEKCGGWLEGNTIGLAINLEQKLN--IHV 968
Query: 331 HPHPG 335
P PG
Sbjct: 969 RPRPG 973
>gi|355709241|gb|AES03526.1| poly polymerase alpha [Mustela putorius furo]
Length = 358
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 107/196 (54%), Gaps = 19/196 (9%)
Query: 218 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF 277
NP D+YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LF
Sbjct: 2 NPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLF 59
Query: 278 EPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHP 332
E FF+ YK+Y+ + SA W G VES++R L +E++ + L Q P
Sbjct: 60 EAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP 119
Query: 333 HPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLR 385
P + DK + + +GL K+ E D+ ++ F +QA++ M+ +
Sbjct: 120 APKENPDKEE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV- 176
Query: 386 KPGMQISVAHVTRRNL 401
M+I+ HV R+ L
Sbjct: 177 --DMKIAAMHVKRKQL 190
>gi|211909028|gb|ACJ12807.1| poly(A) polymerase alpha [Bubalus bubalis]
Length = 108
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
Query: 212 VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADV 271
VWDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A
Sbjct: 1 VWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA-- 58
Query: 272 DWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 321
+W LFE FF+ YK+Y+ + SA W G VES++R L +E
Sbjct: 59 EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLE 108
>gi|124003256|ref|ZP_01688106.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
ATCC 23134]
gi|123991354|gb|EAY30785.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
ATCC 23134]
Length = 982
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 147/318 (46%), Gaps = 25/318 (7%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
G + + +DID LC P + + FF +L L+++ + +H V DA V +K
Sbjct: 628 FGSELLKIAQAHSDIDVLCPLPP-SLALDPFFDQLQTALSQVAQ--GVHLVTDARVTTLK 684
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 131
F GV+ DLL + +P L + Q D + +++ G +IL L K+
Sbjct: 685 FNLQGVNFDLLAVHHPSFPVP--LHQVKPEAFQQFDPLSWQNMVGYLEGQKILALGNKVG 742
Query: 132 N--FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC-QLYPNAVPSM--LVSRFF 186
FR +R +R WA R+ + NV GF G I+WA+L A C P++ L+ FF
Sbjct: 743 QTLFRDLVRTIRLWAARKQLTGNVFGFFGNISWAILAAWSCAHCQTKHTPTLEHLLQNFF 802
Query: 187 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 246
+ Q W P+ ++EG+ V R +D MP+++ YP N++ N++ ST
Sbjct: 803 DLLAQHSWVIPI---GLQEGTSSYIV----RKHRD---WMPVVSAFYPYKNTTRNLTQST 852
Query: 247 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 306
+++ E Q+ + + ++W T F + Y L +++SA N +L +
Sbjct: 853 AKVIQGEIQKARLLLQ-----NTSINWLTFFAATDVQKEYTQLLILELSASNEQNLELAQ 907
Query: 307 GWVESRLRQLTLKIERHT 324
G + L + L +E+
Sbjct: 908 GKLLGSLLGVILALEQQV 925
>gi|308482424|ref|XP_003103415.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
gi|308259836|gb|EFP03789.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
Length = 388
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 24/218 (11%)
Query: 212 VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADV 271
VWDPR N D++HLMPIITPA+P NS++NVS STL I+ +E + IC+ + A
Sbjct: 156 VWDPRINYSDRFHLMPIITPAFPEQNSTHNVSKSTLHIIQEEMKSALLICDQIHAGSA-- 213
Query: 272 DWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCH 331
W+ LFE FF Y++++ + ++ E+ + G+ ESR+RQL +ER+ L H
Sbjct: 214 TWNNLFEEVNFFSRYRHFVALSMNEESNE------GFFESRIRQLVQIMERNCQVKL-AH 266
Query: 332 PHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQI 391
+P F KS +F+GL+ + V + D+ ++ FK+ V + G+QI
Sbjct: 267 INPKKF--KSVQNASVWFLGLELIENV-----KNLDLTAEIEGFKKNVEK---QANGIQI 316
Query: 392 SV--AHVTRRNLPNFVFPGGVRPSR---PSKGTWDSRR 424
++ +V R L ++ ++ R GT +R
Sbjct: 317 TLDATYVKRSGLIKWIPVADLKKGRFVNKCTGTTSKKR 354
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
LI G + VH GADID L + PRH R DFF +ML E V L V +A VP
Sbjct: 86 LISFGSYRLGVHNSGADIDALVIAPRHVAR-LDFFTSFKKMLLENSSVKNLACVENAFVP 144
Query: 69 VM 70
+M
Sbjct: 145 IM 146
>gi|115448957|ref|NP_001048258.1| Os02g0771500 [Oryza sativa Japonica Group]
gi|113537789|dbj|BAF10172.1| Os02g0771500, partial [Oryza sativa Japonica Group]
Length = 91
Score = 106 bits (265), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/65 (70%), Positives = 53/65 (81%)
Query: 115 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 174
+G RV D+ILRLVP FRT LRC++ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYP
Sbjct: 9 HGIRVADEILRLVPDTAAFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARVCQLYP 68
Query: 175 NAVPS 179
N P+
Sbjct: 69 NTSPA 73
>gi|340959918|gb|EGS21099.1| hypothetical protein CTHT_0029400 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1213
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 158/365 (43%), Gaps = 57/365 (15%)
Query: 6 PLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP--EVTELHPVP 63
P+V++ +G V +D+D LC+GP A + FF + + L ++P ++ + V
Sbjct: 661 PIVIVPVGSYGLGVWTSSSDLDVLCIGPFSA---QTFFALVTRALRKVPPQDIKIIRRVR 717
Query: 64 DAHVPVMKFKFSGVSIDLLYARLSLWVIPED----LDISQDSILQNADEQTVRSLNGCRV 119
+++ + G+ DL + I E L + + + + Q++ L R
Sbjct: 718 ANTGTMLELEIHGIKTDLQCCPAT--TIAERWGDVLRTAPNDPVWDLSPQSLLKLKAVRD 775
Query: 120 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN---- 175
D + R VP I+ FR R +R WAK RGVY++ GFL GI A+LVAR+ +L N
Sbjct: 776 MDYLRRTVPNIRVFRAANRAIRAWAKARGVYTSRFGFLSGIQIAILVARVAKLLANNPDV 835
Query: 176 ----AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP----RRNPKDKYHLM- 226
V LV+ FF Y + W + +DP R P ++
Sbjct: 836 KTPITVEDFLVT-FFTHYASFPWSTHL-------------AFDPFFHRNRLPYNRVPFRE 881
Query: 227 PIITPAY--PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT--- 281
PI Y P +N++ S S+ R + DEF+R EA+ DW F T
Sbjct: 882 PIAILGYFPPALNTAAAASPSSARTLADEFRRA---GEALVSGNV-TDW-AFFLSGTGSN 936
Query: 282 -------FFEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHP 332
F AYK Y+R+D S R + GW+ESRL L + I R T +L
Sbjct: 937 GTTGVQEFLSAYKTYIRLDASYWGLSRSRGSQFLGWLESRLVSLLVDISRRTNGVLHARI 996
Query: 333 HPGDF 337
P F
Sbjct: 997 WPARF 1001
>gi|212536855|ref|XP_002148583.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
gi|210068325|gb|EEA22416.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
Length = 1206
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 160/357 (44%), Gaps = 47/357 (13%)
Query: 5 LPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELH---P 61
+ V++ +G V P +DID L +G + + F + Q L PE E+H
Sbjct: 640 ISFVVVPVGSYASGVWDPSSDIDCLVIG---SISPKTFMALMVQKL-RRPEWQEIHILRK 695
Query: 62 VPDAHVPVMKFKFSGVSIDLLY-ARLSL---WVIPEDLDISQDSILQNADEQTVRSLNGC 117
V +++ + GV DL Y A S+ W P+ L + + Q++ LN
Sbjct: 696 VKATSGTMLEIQAGGVRFDLQYCAATSVTDSW--PKALTLPSSDPTFDLPMQSLLKLNSH 753
Query: 118 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV 177
R + + R +P + FR R ++ WAK RG+YS+ G+LGGI+ LL+AR+C+L
Sbjct: 754 RDLEYLQRTIPDLATFRKAYRFIKAWAKFRGIYSSKLGYLGGIHITLLLARVCKLSFREA 813
Query: 178 ----PSMLVSRFFRVYTQWRWPNPVLL-CAIEEGSLGLQVWDPRRNPKDKYHL-----MP 227
S ++S FF Y + W N ++ G+ KYH M
Sbjct: 814 GATSVSDIISDFFFYYENFDWKNDMVYETTFYTGT-------------PKYHRLSREPMV 860
Query: 228 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP---FTFFE 284
I++ P +N ++ + S++ + EF+R ++ +E W + +P F E
Sbjct: 861 ILSIHPPKVNVAHASTVSSVHTLEQEFKRAAQLI-----SEVGATWKNIADPSGVVQFLE 915
Query: 285 AYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 339
AY +Y+++D+ A+ A R GW+E R L + I R + + P F+D
Sbjct: 916 AYSSYIKVDVHYWAKAAAKGRALFGWLEFRCVSLLVNINR-GFPDIHARIWPARFTD 971
>gi|119620436|gb|EAX00031.1| poly(A) polymerase gamma, isoform CRA_c [Homo sapiens]
Length = 425
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 108/189 (57%), Gaps = 13/189 (6%)
Query: 226 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 285
MPIITPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+
Sbjct: 1 MPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQK 58
Query: 286 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSK 342
Y++Y+ + SA ++ W G VES++R L +ER+ + + +P PG+
Sbjct: 59 YRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKD 118
Query: 343 PLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHV 396
Y S +F+G+ ++ V E D+ ++ F +QA ++ L++ GM+I HV
Sbjct: 119 NNYVSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKE-GMKIEATHV 176
Query: 397 TRRNLPNFV 405
++ L +++
Sbjct: 177 KKKQLHHYL 185
>gi|414888166|tpg|DAA64180.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888167|tpg|DAA64181.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 265
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 28/193 (14%)
Query: 155 GFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL------CAIEEGSL 208
GF GI+ A+L A +C+ +P+A S L + FF+ + W W PV L C EG
Sbjct: 12 GFFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSLHDELTTCLHSEG-- 69
Query: 209 GLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE 268
LMPI+ P P + V+ +L+ + +E RG+ + +
Sbjct: 70 ---------------RLMPIVMPCTPPEFCASTVTKGSLKKIREELTRGYVL--TRDPLR 112
Query: 269 ADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML 328
D W LFEPF + + Y+ +LRI + A +L +W GWV+SR R L LK+ER +
Sbjct: 113 HDFQWSWLFEPFPYDQKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLER---AGI 169
Query: 329 QCHPHPGDFSDKS 341
+C P P + D +
Sbjct: 170 ECDPCPSEEVDHT 182
>gi|402581474|gb|EJW75422.1| hypothetical protein WUBG_13666 [Wuchereria bancrofti]
Length = 351
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 105/205 (51%), Gaps = 31/205 (15%)
Query: 194 WPNPVLLCAIEEG------SLGLQVWDPR------RNPKDKYHLMPIITPAYPCMNSSYN 241
WP+PV+L E SL VWDPR +P ++HLMPI+TPA+P NS++N
Sbjct: 37 WPHPVVLKETEVSHARDMPSLQELVWDPRSRSGDRESPSRRFHLMPIVTPAFPQQNSTFN 96
Query: 242 VSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR-IDISAENAD 300
V+ S+L+I+M+E + G + K +A W LFE FF YK++L + +SA D
Sbjct: 97 VTKSSLKIIMNEIEEGLVTINDIMKGKA--GWSALFEEVNFFSRYKHFLALLCLSATEQD 154
Query: 301 DLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS----------YFM 350
+L W G VES++R L +ER ++ CH H + ++ P +F+
Sbjct: 155 ELV-WCGLVESKIRFLIASLERRE-SIRVCHVHTKYYQPRNDPFPVQVSLQNPRCRLWFI 212
Query: 351 GLQRKQGVPVGEGEQFDIRLTVKEF 375
GL + V + DI+ V+ F
Sbjct: 213 GLDLNKTV----SRKIDIQHEVQSF 233
>gi|391865116|gb|EIT74407.1| hypothetical protein Ao3042_09684 [Aspergillus oryzae 3.042]
Length = 973
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 150/321 (46%), Gaps = 32/321 (9%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM--PEVTELHPVPDAH 66
++ +G + V +D+D L +G FF + L +V L V A
Sbjct: 638 VVPVGSYGFGVWNSSSDMDILVIG---QVSPRTFFALIIAKLRRATDSDVVLLRKVKAAS 694
Query: 67 VPVMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 124
+++ + GV +DL Y + V P+ L++ D + Q++ LN R +
Sbjct: 695 GIMLELEVRGVRVDLQYCAATRVVESWPQALELPADHSTFDLPMQSLLKLNSLRDMHYLQ 754
Query: 125 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM---- 180
R +P + +FR R ++ WA+RRG+YS+ G+LGGI+ LL+ARIC L ++
Sbjct: 755 RTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAAD 814
Query: 181 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY 240
+++ FF+ Y Q+ W V+ S + + P+R P + I++ P +N +
Sbjct: 815 IITTFFKHYAQFNWEKQVVYDPSFYKS-PPRYFRPQREP------LVILSQHQPKVNVAR 867
Query: 241 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL---FEPFT----FFEAYKNYLRID 293
S + R ++ EFQR ++ ++ DV W+ L E T F ++Y++Y +++
Sbjct: 868 AASIPSTRTLVQEFQRADKLL-----SQQDVTWEQLAGSIENSTGADEFLKSYRSYAKVN 922
Query: 294 IS--AENADDLRNWKGWVESR 312
+ A R GW+E R
Sbjct: 923 VQYWGGAATKGRMLVGWLEWR 943
>gi|340501019|gb|EGR27841.1| poly polymerase, putative [Ichthyophthirius multifiliis]
Length = 306
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 133/271 (49%), Gaps = 28/271 (10%)
Query: 107 DEQTVRSLNGCRVTDQILRLV------PKIQN--FRTTLRCMRFWAKRRGVYSNVAGFLG 158
D++ ++S+NG R IL V P+I F+ L+ ++ WA+ G+Y N GFL
Sbjct: 2 DQKDIKSINGFRSNQAILEYVSEKNPNPEIAKSRFKDALKVIKIWARHNGIYDNRLGFLS 61
Query: 159 GINWALLVARICQLYPNAVPSMLVSRFFRVY-TQWRWPNPVLLCAIEEGSLGLQVWDPRR 217
GI+ A+++A+I QL+PN + ++ +FF+ + ++W W + + +Q+ +R
Sbjct: 62 GISLAIMLAKILQLFPNLEVNGIIKQFFQTFASRWDWKKMDVQLGSRSEEMKVQMQSQQR 121
Query: 218 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF 277
M IITPAYP N++ V I++ + ++ + N+ ++ W+ +
Sbjct: 122 ------KCMHIITPAYPEYNTTDRVKMINFNIIVAKLIASNDYIQ----NQKNIVWEKIV 171
Query: 278 EPFTFFEAYKNYLRIDISAENADDLRNW---KGWVESRLRQLTLKIERHTYN--MLQCHP 332
E F YK ++ ID+ ++ + K + RL L +++ Y+ ++ P
Sbjct: 172 EKENFINHYKLFIEIDLIQNKKGEIGQFIAQKKYFALRLLNLFDQLKGIEYDPEKIEVRP 231
Query: 333 HPGDFSDKSKP--LYCSYFM-GLQRKQGVPV 360
P F DK P YC+ F+ GL+ K PV
Sbjct: 232 WPI-FFDKKDPDYPYCAAFLIGLKNKMHQPV 261
>gi|294867702|ref|XP_002765194.1| hypothetical protein Pmar_PMAR025535 [Perkinsus marinus ATCC 50983]
gi|239865189|gb|EEQ97911.1| hypothetical protein Pmar_PMAR025535 [Perkinsus marinus ATCC 50983]
Length = 602
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 166/413 (40%), Gaps = 89/413 (21%)
Query: 8 VLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE----VTELHPVP 63
+L+ G + P +DIDT+ + + + + ++LTEM + +
Sbjct: 97 ILLVFGSTLMEITTPTSDIDTVVL--VSDVKRSAYMKRVQKVLTEMEPFRSYCDDFSLLA 154
Query: 64 DAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN------------------ 105
D+ VP +K + G +D+ +A L V+ E D Q + +
Sbjct: 155 DSLVPYIKCSYRGYPVDVQFAVLPSTVLKECHDAIQAEVHRVCTAGLLEPEGSAAADWSN 214
Query: 106 --ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 163
D+ T+RSLNG RV +L+ P + +R LR ++ WAK RG+YSNV G+ GG+ WA
Sbjct: 215 SLVDDATIRSLNGVRVGRYLLKRTPVLAVYRVVLRFVKMWAKARGIYSNVMGYFGGVTWA 274
Query: 164 LLVARICQ---------LYPNAVPSMLVSRF-FRVYTQWRWPNPV------LLCAIEEGS 207
+LV+++ Q +AV +L+ F F W NPV L + GS
Sbjct: 275 ILVSKVMQDNAELAMRETEEDAVREILLKFFDFCSTHPWGSENPVTANDEILNGFVSAGS 334
Query: 208 LGLQVWDPR-------------------RNPKD----------KYHLMPIITPAYPCMNS 238
+ + R R+P + + M ++TP P NS
Sbjct: 335 VEMYTPPARDIFGDDDVVDKQLAPQHVLRDPAECPYAADGVGIEGQCMVVLTPVLPTQNS 394
Query: 239 SYNVSTSTLRIMMDEFQRGHEICE--AMEKNEADVDWDTLFEPFTFFEAYKN--YLRIDI 294
S+N +M+ EF+R + A+ + F YK ++ ++I
Sbjct: 395 SFNALDFNRYVMVQEFKRAAHMLSLFALSPQSCPFRLGAVCARVHPFRLYKRLLFVEVEI 454
Query: 295 SAENADDLRN---------WKGWVESRLRQLTLKIERHTYN----MLQCHPHP 334
EN L N VES++R T K+ ++ L+ +PHP
Sbjct: 455 RPENQRTLSNDDVHLLQKRIAAMVESKVRIFT-KLSAAAFHEEGTYLRLYPHP 506
>gi|7108953|gb|AAF36552.1|AF201910_1 polyA polymerase [Trypanosoma cruzi]
Length = 304
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 96/191 (50%), Gaps = 10/191 (5%)
Query: 3 RYLPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPV 62
R P GLG SV DI C E FF E +L P V + V
Sbjct: 67 RAYPFGSCGLGA---SVADSDLDIVLFC---SFKVTAEVFFREFPPLL--QPVVGNVVLV 118
Query: 63 PDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQ 122
P A VPV+KF +SG S+D+++ +L P + DS L T S+NG R +
Sbjct: 119 P-ARVPVVKFSYSGTSVDVVFVSAALAAPPTTEQLLDDSFLLQVARDTRHSVNGLRTVLE 177
Query: 123 ILRLVPKIQN-FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSML 181
+ R +P + F T L+ ++ WA RR VY N+ + G+ A++VARICQ+ P + P++L
Sbjct: 178 VKRRLPVAYDVFTTVLKSVKLWAMRRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVL 237
Query: 182 VSRFFRVYTQW 192
+ FF YTQW
Sbjct: 238 LRFFFLFYTQW 248
>gi|402083981|gb|EJT78999.1| hypothetical protein GGTG_04090 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1263
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 163/401 (40%), Gaps = 74/401 (18%)
Query: 6 PLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDA 65
PLV+ +G V P +DID +C+GP + F L V
Sbjct: 672 PLVVTSVGSYGLGVWTPSSDIDVMCIGPYSSA----VFMALAVQRIRKAGARGFKLVRRV 727
Query: 66 HV---PVMKFKFSGVSIDLLYARLSL----WVIPEDLDISQDSILQNADEQTVRSLNGCR 118
+++ + GV +DL Y + W P LD + + QT+ L R
Sbjct: 728 RANTGTMLELEVQGVKMDLQYCAATSVAEGW--PAVLDRPASDPVFSLPAQTLGKLKAAR 785
Query: 119 VTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ-LYPNAV 177
D + R +P + FR R +R WA+ RG+YS G+LGGI ++L+AR+C+ L +A
Sbjct: 786 DLDYLRRSLPDLAKFRLAHRAVRTWARTRGIYSVRFGYLGGIQISVLLARVCKSLARDAG 845
Query: 178 PSMLVS----RFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP-RRNPKDKYHL-----MP 227
P + V+ FF Y + W + +DP N K YH +
Sbjct: 846 PGLSVADILVTFFHHYAAFDWQQNL-------------AFDPFFHNKKLSYHRTFREPLA 892
Query: 228 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE---PFT--- 281
I+ P +N+S+ + ++R M EF+R + + DV WD F P T
Sbjct: 893 ILGFFPPMLNTSHAATIPSVRAMAGEFRRAAALLAS-----EDVTWDAFFRGGGPTTVPG 947
Query: 282 ------------FFEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNM 327
F +YK+++++++S R + GW ESR + + + R N+
Sbjct: 948 PLSATLPSGAADFLASYKSFVKLELSYWGISLPRGAQFVGWFESRCPLILVDVSRRLPNV 1007
Query: 328 L-QCHPH-----------PGDFSDKSKPLYCSYFMGLQRKQ 356
L + P GD + + Y +GL+ +Q
Sbjct: 1008 LARMWPERFVDAAAAAASAGDGQESDREYQGCYLVGLEHQQ 1048
>gi|258563048|ref|XP_002582269.1| predicted protein [Uncinocarpus reesii 1704]
gi|237907776|gb|EEP82177.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1040
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 152/346 (43%), Gaps = 67/346 (19%)
Query: 5 LPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPV 62
+ +VL+ +G V P +DID L +GP + FF + L + + + L V
Sbjct: 665 IAMVLVPVGSYGLGVWSPSSDIDCLVIGP---ISSKTFFAVAEKRLRKATDLGIRILRRV 721
Query: 63 PDAHVPVMKFKFSGVSIDLLYA----------RLSLWVIPEDLDISQDSILQNADEQTVR 112
A +++ + G+ DL Y R+SL +P D DS Q +
Sbjct: 722 KAATGTMLELEVEGIKCDLQYCPASRVVEAWQRISL--LPPD-----DSTFY-LSSQALT 773
Query: 113 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 172
L R D I R +P + FR R + WAKRRG+Y G+LGGI+ ++++R+C+L
Sbjct: 774 KLQAFRDVDYIRRSIPDLAAFRAAHRFITLWAKRRGIYLARFGYLGGIHITMMLSRVCKL 833
Query: 173 --YPNAVPSM-LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP---RRNPKDKYHL- 225
SM ++ RFF+ YT + W +L DP + P+ + +
Sbjct: 834 SCRKGGATSMDMICRFFKYYTNFDWEREILC-------------DPSFFKDAPRYRRYAN 880
Query: 226 --MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT-- 281
M I+T P +N + + S ++ R ++ E QR E+ + D+ W L T
Sbjct: 881 EPMVILTIHTPLVNIARSASKASTRTIIKELQRMDELI-----STPDMSWSGLVGNITAS 935
Query: 282 -----FFEAYKNYLRIDIS------AENADDLRNWKGWVESRLRQL 316
F + Y +Y++I + A+ + L GW+ESR +L
Sbjct: 936 DSSQEFLKTYTSYIKIHVQYWGMILAKGSTLL----GWLESRCCRL 977
>gi|327293125|ref|XP_003231259.1| hypothetical protein TERG_08045 [Trichophyton rubrum CBS 118892]
gi|326466375|gb|EGD91828.1| hypothetical protein TERG_08045 [Trichophyton rubrum CBS 118892]
Length = 1216
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 163/388 (42%), Gaps = 67/388 (17%)
Query: 6 PLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVP 63
PLVLI +G GP +D+D LC+G A FF Q L + + V
Sbjct: 646 PLVLIPVGSYGLGTWGPRSDVDCLCIG---AISSTTFFALAIQRLRRASALGIRIVRKVK 702
Query: 64 DAHVPVMKFKFSGVSIDLLYARLS----LWV----IPEDLDISQDSILQNADEQTVRSLN 115
A +++ + + +DL Y + W IP S D I + ++ L
Sbjct: 703 AATGIMLELQSGHIKLDLQYCPAANIAERWQEVSRIP-----SHDPIF-DLSLHSLSKLQ 756
Query: 116 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL--- 172
R + I R+VP + FR RC+ WAK GVYS+ G LGGI+ +++ R+ QL
Sbjct: 757 PYRDQEYIKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMMLCRLHQLIHE 816
Query: 173 -YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 231
+ LV+ FF Y + W N +++ S G+Q RR+ ++ M I+T
Sbjct: 817 KFGRVTVPELVAMFFHHYAHFDWKNNMVV------SPGVQT-RYRRSLREP---MVILTV 866
Query: 232 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT---------- 281
P +N + V+T +LR ++ F+R E+ E W + +
Sbjct: 867 HAPTINVARAVTTPSLRTIVSAFKRAEELM-----GEDGAKWSNILNDISISHNNQTGAE 921
Query: 282 -FFEAYKNYLRIDI-----SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG 335
F AYK+Y+++++ S A L GW+ESR +L ++R + P
Sbjct: 922 KFLAAYKSYIKVNVQYWGPSPTQASSL---IGWLESRFFRLLNDLDRQVLG-IHGRIWPA 977
Query: 336 DFSDKSKP---------LYCSYFMGLQR 354
F+ P Y +GL+R
Sbjct: 978 RFTSIDAPDSENDGETEYQGCYLVGLER 1005
>gi|443916802|gb|ELU37750.1| polymerase [Rhizoctonia solani AG-1 IA]
Length = 508
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 91/196 (46%), Gaps = 50/196 (25%)
Query: 193 RWPNPVLLCAIEE--------GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 244
+WP P+LL IEE + +VW+PR D+ HLMPIITP+YP M S++NV+
Sbjct: 77 KWPQPILLQQIEEEVKELDFSKRMNFRVWNPRVC--DRNHLMPIITPSYPSMCSTHNVTR 134
Query: 245 STLRIMMDEFQRGH------------------EICEAMEKNEADVDWDTLFEPFTFFEAY 286
ST+ +M DEF RG +I E + A +W LF FF+ Y
Sbjct: 135 STMSVMKDEFMRGKFSYLLLCTDDTNNKRPGSQIVEQIMFRRA--EWSELFAKHDFFQKY 192
Query: 287 KNYLRIDISAENADDLRNW----------------KGWVESRLRQLTLKIERHTYNMLQC 330
+ YL+I S+ A+D W G VESRLRQL +K+E +
Sbjct: 193 RYYLQIIASSGKAEDQLKWYVSPFRAWVVSEAASRSGTVESRLRQLVMKLE-FVDQLEVA 251
Query: 331 HPHPGDFSDKSKPLYC 346
HP F K YC
Sbjct: 252 HPFIKGFEQKH---YC 264
>gi|71657771|ref|XP_817395.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70882585|gb|EAN95544.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 406
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 119/302 (39%), Gaps = 74/302 (24%)
Query: 173 YPNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNPKDK 222
+PN + +V RFFR+Y W PNP + L L + WDPR + D
Sbjct: 5 HPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRESKSDA 64
Query: 223 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC---------EAMEKNEADVDW 273
L P++TPA P N+ +NV+ + LR + EF RGHEIC EA + W
Sbjct: 65 MALFPVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGIW 124
Query: 274 DTLFEPFTFFEAYKNYLRIDISAENADDLRN------------WKGWVESR------LRQ 315
L EP FF +K YL + +S +A+ + W G ESR +R
Sbjct: 125 SRLLEPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESKIRFLWAGTAESRGYALENVRH 184
Query: 316 LTLKIERHTYNM--------------------------LQCHPHPGDFSDKSKP--LYCS 347
+ +++ Y + H G D S P C
Sbjct: 185 VRIRLNPRRYEAPEEVETRARLLKKTSRSSGGGNGSMEVSSHQTSGAVDDSSAPKIFSCH 244
Query: 348 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ----ISVAHVTRRNLPN 403
YF+G+ P G + D+ +++ F V K G+ I+V +++ +P
Sbjct: 245 YFIGMSVDPKAPSG---KIDLAPSIRAFHGIVRQLRQYKEGITRLPVITVEDISK--IPA 299
Query: 404 FV 405
FV
Sbjct: 300 FV 301
>gi|296421816|ref|XP_002840460.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636676|emb|CAZ84651.1| unnamed protein product [Tuber melanosporum]
Length = 1241
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 145/330 (43%), Gaps = 48/330 (14%)
Query: 5 LPLVLIGLGYDKYSVHGPGADIDTLCVGPRHAT--------REEDFFGELHQMLTEMPEV 56
+P++L +G VHG +DID LCV A R F GE LT
Sbjct: 680 IPIILAPVGSYALGVHGRDSDIDCLCVSTISAKTFFEVARKRIRRFGGERGIRLTRFV-- 737
Query: 57 TELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDIS----QDSILQNADEQTVR 112
D+ VPV++ K + DL Y + SL +I I DS+ + ++
Sbjct: 738 -------DSKVPVLEVKVGNIKFDLQYCQ-SLAIIEHWSAIPLLPPNDSVF-SLPASGLK 788
Query: 113 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 172
SLN R T+ +LR +P I FR R ++ WA GV+S+ G+LGG + LL+ARIC+L
Sbjct: 789 SLNSYRDTEFLLRTIPNINVFRLAHRFIKIWALASGVFSSRFGYLGGFHITLLLARICKL 848
Query: 173 Y----PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 228
+ + +V FF Y++ W + +C E S G R P M +
Sbjct: 849 ADGDPKDVTAAKIVRLFFAYYSKTEWLTEI-ICD-PEFSAGASYQRFSREP------MAV 900
Query: 229 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWD--TLFEPFTFFEAY 286
+ P +N + N + ++ + EF E EK WD ++ F Y
Sbjct: 901 TSIYAPVVNVARNATRHSVSALTREF-------ELAEKALDSGRWDLRSMGRENEFLAEY 953
Query: 287 KNYLRIDISAENADDLRNWKG---WVESRL 313
++Y++ID+ + LR K WVES +
Sbjct: 954 ESYVKIDVQYW-GNTLRRGKALTLWVESTI 982
>gi|189194681|ref|XP_001933679.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979243|gb|EDU45869.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1151
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 164/382 (42%), Gaps = 49/382 (12%)
Query: 5 LPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPV 62
+P V++ +G V +DID LC+G + FF Q + + V L V
Sbjct: 580 IPFVMVPVGSYALGVWTSDSDIDCLCIG---TISSKTFFKLARQRIIKSDNRGVRILRKV 636
Query: 63 PDAHVPVMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVT 120
+ +++ +GV +DL Y + V E +I + N ++R L R
Sbjct: 637 EASTGTMLELSVNGVLMDLQYCPATQVVERWSEFRNIPASDPIFNLSLLSLRKLKPYRDL 696
Query: 121 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP----NA 176
I R +P + +FR RC++ WA +RG+YS GFLGG++ L+++ IC+ +A
Sbjct: 697 LYIQRTLPSLSSFRLAYRCIKLWAVQRGLYSAKFGFLGGVHITLMLSWICKRLAYDSGSA 756
Query: 177 VPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCM 236
+ LV+ FF Y Q+ W N ++ + PR N + M ++ P
Sbjct: 757 SAADLVTSFFHHYGQFDWTNEMVY------DVFFHKKRPRYN-RSAREPMVVLGFHAPNS 809
Query: 237 NSSYNVSTSTLRIMMDEFQ-RGHEICEAMEKNEADVDWDTLF--------------EPFT 281
N ++ + L+ ++ EF+ G +C E + WD F
Sbjct: 810 NIAHTSTVPGLQTLVKEFKAAGERLC------EQGMTWDAFFGLGPTLSSVSSPSLGAAG 863
Query: 282 FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS- 338
F E Y N++++DI ++ GWVESR L ++I + N + PG F+
Sbjct: 864 FLETYHNFVKVDIQFWGRTLTKGKSLVGWVESRCISLIVEIHKTLPNS-EVRIWPGRFTN 922
Query: 339 ------DKSKPLYCSYFMGLQR 354
D+S+ + Y +GL +
Sbjct: 923 NETSAADESRDYHGCYLIGLSK 944
>gi|367022686|ref|XP_003660628.1| hypothetical protein MYCTH_2299149 [Myceliophthora thermophila ATCC
42464]
gi|347007895|gb|AEO55383.1| hypothetical protein MYCTH_2299149 [Myceliophthora thermophila ATCC
42464]
Length = 1260
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 143/341 (41%), Gaps = 43/341 (12%)
Query: 7 LVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP-EVTELHPVPDA 65
+V++ +G V +DID LC+GP + FF Q + + + +L A
Sbjct: 683 VVVVPVGSYALGVWTSSSDIDVLCIGPFSSN---TFFALASQRVRKAAAQGIKLLRRVRA 739
Query: 66 HVPVM-KFKFSGVSIDLLYARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRVT 120
H M + + GV +DL Y + W P+ L I + + QT+ L R
Sbjct: 740 HTGTMLELEVHGVKVDLQYCPAASVAERW--PDVLRIPSSDPVWSLSAQTLSKLKAIRDA 797
Query: 121 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV--- 177
D + R VP + FR R ++ WAK RG+Y+ GFL GI ++L+AR+ +L
Sbjct: 798 DYLRRSVPDLTTFRLAHRFVKTWAKSRGIYAARFGFLSGIQISVLLARVQKLLAREAGAP 857
Query: 178 --PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP----RRNPKDKYHLMPIITP 231
P L+ FF Y + W + +DP RR P + P+
Sbjct: 858 PTPEALIVTFFHHYAAFDWSAQL-------------AFDPLFHRRRLPYSRTAREPLAIL 904
Query: 232 AY--PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT----FFEA 285
Y P +N++ S + + + EF+R + + A W +L F A
Sbjct: 905 GYFPPALNTALAASVPSTKTLAAEFRRASDALRSATDPPA--SWSSLLSVSAGRDEFLAA 962
Query: 286 YKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHT 324
YK+Y+++D+ R + GW+ESR L + + R
Sbjct: 963 YKSYVKLDVQYWGLSLSRGAQFLGWLESRCVMLLVDLHRRA 1003
>gi|330926264|ref|XP_003301394.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
gi|311323960|gb|EFQ90506.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
Length = 1230
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 168/383 (43%), Gaps = 51/383 (13%)
Query: 5 LPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQML--TEMPEVTELHPV 62
+P V++ +G V +DID LC+G + FF Q + ++ V L V
Sbjct: 659 IPFVIVPVGSYALGVWTSDSDIDCLCIG---TISSKTFFKLARQRIIRSDNRGVRVLRKV 715
Query: 63 PDAHVPVMKFKFSGVSIDLLYARLSLWVI---PEDLDISQDSILQNADEQTVRSLNGCRV 119
+ +++ +GV +DL Y ++ V+ E +I + N ++R L R
Sbjct: 716 EASTGTMLELSVNGVLMDLQYCP-AIQVVERWSEFRNIPASDPMFNLSLLSLRKLKPYRD 774
Query: 120 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP----N 175
I R +P +FR RC++ WA +RG+YS GFLGG++ L+++ +C+ +
Sbjct: 775 LLYIQRTLPSPSSFRLAYRCIKLWAVQRGLYSAKFGFLGGVHITLMLSWVCKRLAYDSGS 834
Query: 176 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 235
A + LV+ FF Y Q+ W N ++ + PR N + M ++ P
Sbjct: 835 ASAADLVASFFHHYGQFDWTNDMVY------DVFFHKKRPRYN-RSTREPMVVLGFHTPN 887
Query: 236 MNSSYNVSTSTLRIMMDEFQRGHE-ICEAMEKNEADVDWDTLFEPFT------------- 281
N ++ + L+I++ EF+ + +C E + WD F P +
Sbjct: 888 SNIAHTSTMPGLQILVKEFKAADKRLC------EPGMTWDAFFGPGSTLSPVSSPSLGAA 941
Query: 282 -FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 338
F E Y+N++++DI ++ GWVESR L ++I + + PG F+
Sbjct: 942 GFLETYQNFVKVDIQFWGRTLTKGKSLVGWVESRCISLIVEIHK-ALPKSEVRIWPGRFT 1000
Query: 339 -------DKSKPLYCSYFMGLQR 354
D+SK + Y + L +
Sbjct: 1001 DNETNVADQSKDYHGCYLISLSK 1023
>gi|349805727|gb|AEQ18336.1| putative poly polymerase alpha [Hymenochirus curtipes]
Length = 183
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 5/80 (6%)
Query: 107 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 166
D + +RSLNGCRVTD+IL LVP NFR+TLR ++ WAKRRG+YS LGG +WA+LV
Sbjct: 1 DIRCIRSLNGCRVTDEILHLVP--NNFRSTLRAIKLWAKRRGIYSTFR-ILGG-SWAMLV 56
Query: 167 ARICQLYPNAVPSMLVSRFF 186
AR CQLY NA+ S LV +F+
Sbjct: 57 ARTCQLY-NAIASTLVHKFY 75
>gi|315043460|ref|XP_003171106.1| DUF455 domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311344895|gb|EFR04098.1| DUF455 domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 1217
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 159/376 (42%), Gaps = 43/376 (11%)
Query: 6 PLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVP 63
PLVLI +G P +D+D LC+G A FF Q L + + + V
Sbjct: 647 PLVLIPVGSYGLGTWSPDSDVDCLCIG---AISSTTFFSLAIQRLRKASALGIRIMRKVK 703
Query: 64 DAHVPVMKFKFSGVSIDLLYARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRV 119
A +++ + + +DL Y + W E I + + + ++ L R
Sbjct: 704 AATGMMLELQSGNIKLDLQYCPAANIAERW--QEVSRIPSNDPIFDLSLHSLSKLQPYRD 761
Query: 120 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 179
+ I R+VP + FR RC+ WAK GVY++ G LGGI+ ++++R+ QL V
Sbjct: 762 QEYIKRMVPDMNVFRLAHRCITQWAKSSGVYTSKFGLLGGIHITMMLSRLHQLLHGKVGR 821
Query: 180 M----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 235
+ LV+ FF Y + W N +++ S G+Q R + M I+T P
Sbjct: 822 VTIPELVAMFFHHYAHFDWKNSMVV------SPGVQ----SRYRRSMREPMVILTVHVPT 871
Query: 236 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE------PFTFFEAYKNY 289
+N + V+ +LR + F+R E+ +++ DT F A+ +Y
Sbjct: 872 VNVARAVTAHSLRTIASAFKRAEELLAENGARWSNILRDTSISHNKETGAEKFLGAHNSY 931
Query: 290 LRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP---- 343
+++++ + + GW+ESR +L ++R + P F+ K P
Sbjct: 932 IKVNVQYWGPSPTQASSLVGWIESRFFRLLNDLDRQVPGVY-GRIWPARFTSKDSPDSPD 990
Query: 344 -----LYCSYFMGLQR 354
Y +GL+R
Sbjct: 991 DGETEYQGCYLVGLER 1006
>gi|253747873|gb|EET02347.1| Hypothetical protein GL50581_387 [Giardia intestinalis ATCC 50581]
Length = 609
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 130/313 (41%), Gaps = 62/313 (19%)
Query: 1 MPRYLPLV-LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTEL 59
MPR LV L G ++ P +D+DT+ V P++ R DFF + ++ +MP+V+
Sbjct: 94 MPRSERLVRLYPFGSYYLGINEPSSDVDTVVVFPQYV-RIADFFDKFPTIIGQMPQVSYF 152
Query: 60 HPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCR- 118
+ DA VP++ + + DL A +++ I + + N E+++ SLNG R
Sbjct: 153 DCIRDAKVPLITLTYDSIDFDLSAAVMAVNRITDAIPFLDPECTANMHEKSILSLNGYRT 212
Query: 119 ---VTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR------- 168
V Q F+ +R +R W+KR+ +YSN GF GGIN +LVA
Sbjct: 213 NIHVKSQFAGNNAFYNTFQNAVRALRLWSKRKNIYSNRCGFFGGINCIILVANVMLRSTF 272
Query: 169 -------------------------------------ICQLYPNAVPSMLVSRFFRVYTQ 191
I +L + ++ + + Y++
Sbjct: 273 ELLQLDVEQQNAKHRGSLSDTLINSDTTSYIQYNSDSILELRESVPLTLWLYNIYYYYSR 332
Query: 192 WRW-------PNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 244
W PNPV + S+ Q W R KDK M ++T P NS+ V
Sbjct: 333 LDWGTKAVQLPNPVQASSATRLSMTAQSW--MRRDKDK---MCLLTAVEPYFNSTDKVFE 387
Query: 245 STLRIMMDEFQRG 257
+T ++ F++G
Sbjct: 388 TTFDTILTNFRQG 400
>gi|345562420|gb|EGX45488.1| hypothetical protein AOL_s00169g94 [Arthrobotrys oligospora ATCC
24927]
Length = 1237
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 115/256 (44%), Gaps = 31/256 (12%)
Query: 100 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 159
+S L N T++ L R +L +P + +R R ++ WA+++GVYS+ GF GG
Sbjct: 728 NSPLWNLTVPTLKKLQAWRDLLFLLSRIPNLAKYRLAYRFIKLWAEKKGVYSSKFGFFGG 787
Query: 160 INWALLVARICQLY-PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRN 218
++ +LL+AR+ L P A S L++ FF Y+ +W + V+ L Q R
Sbjct: 788 VHISLLLARVAMLLPPTATASQLIAAFFTHYSTTKWDDSVIFMPGTGKVLRYQ-----RA 842
Query: 219 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 278
+DK M I+T P +N + N + T+ + E ++ A K E D + +
Sbjct: 843 TRDK---MVILTINTPVINVAANATIHTVHTLSSELEK------AAAKFELDATFSDVVG 893
Query: 279 PF-------------TFFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERH 323
F F Y Y+++D+ N R GWVESRL L +++ R
Sbjct: 894 SFGDDTSKEIPIGVNEFLGGYNRYIKVDVQFWGLNRQGGRALVGWVESRLVGLLVELGRQ 953
Query: 324 TYNMLQCHPHPGDFSD 339
T L PG F +
Sbjct: 954 TPG-LDARIWPGRFHE 968
>gi|441666296|ref|XP_003275413.2| PREDICTED: poly(A) polymerase alpha [Nomascus leucogenys]
Length = 432
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 23/197 (11%)
Query: 226 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 285
MPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQK 58
Query: 286 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDK 340
YK+Y+ + SA W G VES++R L +E++ + L Q P P + DK
Sbjct: 59 YKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDK 118
Query: 341 SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISV 393
+ + +GL K+ E D+ ++ F +QA++ M+ + M+I+
Sbjct: 119 EE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAA 173
Query: 394 AHVTRRN----LPNFVF 406
HV R+ LPN V
Sbjct: 174 MHVKRKQLHQLLPNHVL 190
>gi|242810869|ref|XP_002485671.1| DUF455 domain protein [Talaromyces stipitatus ATCC 10500]
gi|218716296|gb|EED15718.1| DUF455 domain protein [Talaromyces stipitatus ATCC 10500]
Length = 1206
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 152/339 (44%), Gaps = 34/339 (10%)
Query: 5 LPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELH---P 61
+ V++ +G V +DID L +G F + Q L PE E+H
Sbjct: 640 ISFVVVPVGSYGLGVWDTSSDIDCLVIG---TISPRTFMALMVQKL-RRPEWQEIHILRK 695
Query: 62 VPDAHVPVMKFKFSGVSIDLLYARLSL----WVIPEDLDISQDSILQNADEQTVRSLNGC 117
+ A +++ + GV DL Y + W P+ L++ + Q++ LN
Sbjct: 696 IKAASGTMLELQAGGVGFDLQYCAATSVAESW--PKALELPSSDSTFDLPMQSLLKLNAV 753
Query: 118 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV 177
R + + R +P + FR R ++ WAK RG+YS+ G+LGGI+ LL+A +C+L
Sbjct: 754 RDLEYLQRTIPDLATFRKAYRFIKAWAKCRGIYSSKLGYLGGIHITLLLALVCKLSFRES 813
Query: 178 ----PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY 233
S ++ FF Y + W N ++ +P+ + + L+ I++
Sbjct: 814 GATHESDILCTFFSYYAHFDWKNDLVY------DTTYYTVEPKYHRSSREPLV-ILSIHP 866
Query: 234 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP---FTFFEAYKNYL 290
P +N ++ + +++ + +EF R + + ++A V W+ + + F AY +Y+
Sbjct: 867 PKVNVAHASTVPSVKTLEEEFDRANRLI-----SKAGVSWEDIAGQTGIYQFLNAYPSYI 921
Query: 291 RIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNM 327
++D+ A+ R GW+E R L + I R N+
Sbjct: 922 KVDVQYWAKAVAKGRALFGWLEFRCVSLLVDINRRFANV 960
>gi|326471780|gb|EGD95789.1| hypothetical protein TESG_03255 [Trichophyton tonsurans CBS 112818]
Length = 1212
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 163/385 (42%), Gaps = 61/385 (15%)
Query: 6 PLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVP 63
PLVLI +G GP +D+D LC+G A FF Q L + + + V
Sbjct: 643 PLVLIPVGSYGLGTWGPRSDVDCLCIG---AISSTTFFALAIQRLRKASALGIRIVRKVK 699
Query: 64 DAHVPVMKFKFSGVSIDLLY---ARLS-LWV----IPEDLDISQDSILQNADEQTVRSLN 115
A +++ + + +DL Y A+++ W IP S D I + ++ L
Sbjct: 700 AATGVMLELQSGHIKLDLQYCPAAKIAERWQEVSRIP-----SHDPIF-DLSLHSLSKLQ 753
Query: 116 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL--- 172
R + + R+VP + FR RC+ WAK GVYS+ G LGGI+ ++++R+ QL
Sbjct: 754 PYRDQEYVKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMMLSRLHQLIHE 813
Query: 173 -YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 231
+ LV+ FF Y + W N +++ S G+ RR+ ++ M I+T
Sbjct: 814 RFGRVTVPELVAMFFHHYAHFDWKNNMVV------SPGVHT-RYRRSLREP---MVILTA 863
Query: 232 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT---------- 281
P +N + V+ +LR ++ F+R E+ E W + +
Sbjct: 864 HVPTVNVARAVTAPSLRTIVSAFKRAEELI-----GEDGAKWSNILNDISISQNNQTGAE 918
Query: 282 -FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 338
F AY +Y+++++ + + GW+ESR +L + R + P F+
Sbjct: 919 KFLAAYNSYIKVNVQYWGPSPTQTSSLIGWLESRFFRLLNDLNRQVQG-IHGRIWPARFT 977
Query: 339 DKSKP---------LYCSYFMGLQR 354
P Y +GL+R
Sbjct: 978 SIDAPDSENDGETEYQGCYLVGLER 1002
>gi|302665431|ref|XP_003024326.1| hypothetical protein TRV_01524 [Trichophyton verrucosum HKI 0517]
gi|291188376|gb|EFE43715.1| hypothetical protein TRV_01524 [Trichophyton verrucosum HKI 0517]
Length = 1216
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 154/348 (44%), Gaps = 49/348 (14%)
Query: 6 PLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVP 63
PLVLI +G GP +D+D LC+G A FF Q L + + + V
Sbjct: 646 PLVLIPVGSYGLGTWGPRSDVDCLCIG---AISSTTFFALAIQRLRKASALGIRIVRKVK 702
Query: 64 DAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQ----DSILQNADEQTVRSLNGCRV 119
A +++ + + +DL Y + V +IS+ D I + ++ L R
Sbjct: 703 AATGIMLELQSGHIKLDLQYCPAAN-VAERWQEISRIPFNDPIF-DLPPHSLSELQPYRD 760
Query: 120 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 179
+ I R+VP + FR RC+ WAK GVYS+ G LGGI+ ++++R+ QL
Sbjct: 761 QEYIKRMVPDMYVFRLAHRCISQWAKSSGVYSSKFGLLGGIHITMMLSRLHQLIHEKCGR 820
Query: 180 M----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 235
+ LV+ FF Y + W N +++ S G+Q RR+ ++ M I+T P
Sbjct: 821 VTAPELVAMFFHHYAHFDWKNNMVV------SPGVQT-RYRRSLREP---MVILTVHVPT 870
Query: 236 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT-----------FFE 284
+N + V+ +LR ++ F+R E+ E W + + F
Sbjct: 871 INVARAVTAPSLRTIVSAFKRAEELM-----GEDGARWSNILNDISISHNNQTGAEKFLA 925
Query: 285 AYKNYLRIDI-----SAENADDLRNWKGWVESRLRQLTLKIERHTYNM 327
AY +Y+++++ S A L GW+ESR +L ++R +
Sbjct: 926 AYNSYIKVNVQYWGPSPTQASSL---IGWLESRFFRLLNDLDRQVLGI 970
>gi|326484937|gb|EGE08947.1| DUF455 domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 1212
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 163/385 (42%), Gaps = 61/385 (15%)
Query: 6 PLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVP 63
PLVLI +G GP +D+D LC+G A FF Q L + + + V
Sbjct: 643 PLVLIPVGSYGLGTWGPRSDVDCLCIG---AISSTTFFALAIQRLRKASALGIRIVRKVK 699
Query: 64 DAHVPVMKFKFSGVSIDLLY---ARLS-LWV----IPEDLDISQDSILQNADEQTVRSLN 115
A +++ + + +DL Y A+++ W IP S D I + ++ L
Sbjct: 700 AATGVMLELQSGHIKLDLQYCPAAKIAERWQEVSRIP-----SHDPIF-DLSLHSLSKLQ 753
Query: 116 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL--- 172
R + + R+VP + FR RC+ WAK GVYS+ G LGGI+ ++++R+ QL
Sbjct: 754 PYRDQEYVKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMMLSRLHQLIHE 813
Query: 173 -YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 231
+ LV+ FF Y + W N +++ S G+ RR+ ++ M I+T
Sbjct: 814 RFGRVTVPELVAMFFHHYAHFDWKNNMVV------SPGVHT-RYRRSLREP---MVILTA 863
Query: 232 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT---------- 281
P +N + V+ +LR ++ F+R E+ E W + +
Sbjct: 864 HVPTVNVARAVTAPSLRTIVSAFKRAEELI-----GEDGAKWSNILNDISISQNNQTGAE 918
Query: 282 -FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 338
F AY +Y+++++ + + GW+ESR +L + R + P F+
Sbjct: 919 KFLAAYNSYIKVNVQYWGPSPTQTSSLIGWLESRFFRLLNDLNRQVQG-IHGRIWPARFT 977
Query: 339 DKSKP---------LYCSYFMGLQR 354
P Y +GL+R
Sbjct: 978 SIDAPDSENDGETEYQGCYLVGLER 1002
>gi|403371755|gb|EJY85762.1| hypothetical protein OXYTRI_16252 [Oxytricha trifallax]
Length = 771
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 134/291 (46%), Gaps = 53/291 (18%)
Query: 38 REEDFFGELHQMLTEMPEVT--ELHPVPDAHVPVMKFKF-SGVSIDLLYARLSLWVIPED 94
R++ F +L + L + E+ + A VP++K K+ ++IDL A V +
Sbjct: 391 RQQFLFEKLAEQLNMNFTIKNLEIFKIKHAKVPILKMKYKQQINIDLSLA----IVCNTE 446
Query: 95 LDISQDSILQNA---DEQTVRSLNGCRVTDQILRLVP----KIQNFRTTLRCMRFWAKRR 147
+SQ SI QN D Q+ S+N + +I LV + F L+ ++ WA+RR
Sbjct: 447 EKLSQISI-QNYLLFDNQSEVSINAVIQSQEIKNLVAGCNVNFELFGLCLQHVKTWAQRR 505
Query: 148 GVYSNVAGFLGGINWALLVARICQLYPNAVPSM----------------LVSRFFRVYTQ 191
VY G+LGGI +A+L A I Q Y N M + +FF+ Y+
Sbjct: 506 KVYGQQYGYLGGIAFAILCANIVQAYQNDDKFMCYLNDPNIKHKQKLKYFLLKFFKFYSS 565
Query: 192 WRWPNPVLL---CAIEEGSL---GLQV-------WDPRRNPKDKYHLMPIITP------- 231
W WPNP++L +E L G QV W+P D HLMPII+P
Sbjct: 566 WEWPNPIILDQGFYDQENLLNPNGQQVKMNVKKIWNPISCIGDSQHLMPIISPQIKINTQ 625
Query: 232 -AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADV-DWDTLFEPF 280
N++ V S L+I + EF+R ++I + + K + + + + FE F
Sbjct: 626 KTITSTNTADQVLNSNLQIYLYEFKRAYKIMKKIYKGKIKLKELGSAFESF 676
>gi|354681993|ref|NP_001238936.1| poly(A) polymerase alpha isoform 3 [Homo sapiens]
gi|28071108|emb|CAD61935.1| unnamed protein product [Homo sapiens]
gi|119602054|gb|EAW81648.1| poly(A) polymerase alpha, isoform CRA_e [Homo sapiens]
Length = 238
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L EV +L V +A VP
Sbjct: 97 IFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVP 155
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCR--VTDQILRL 126
V+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNG R + +L+
Sbjct: 156 VIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGMRKPTSFCVLQF 215
Query: 127 VPKIQNFRTTLRCMRFWA 144
+ I F T+ F A
Sbjct: 216 LSDISCFYTSFVLKLFIA 233
>gi|115401228|ref|XP_001216202.1| predicted protein [Aspergillus terreus NIH2624]
gi|114190143|gb|EAU31843.1| predicted protein [Aspergillus terreus NIH2624]
Length = 1168
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 156/354 (44%), Gaps = 42/354 (11%)
Query: 5 LPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM--PEVTELHPV 62
+P+ GLG V +DID L +G A FF + L + E+ L V
Sbjct: 610 VPVGSYGLG-----VWNSSSDIDLLVIGQLSA---RTFFALMVAKLRKAIHGEIKILRKV 661
Query: 63 PDAHVPVMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVT 120
A +++ + GV +DL Y S V P+ LD+ D +++ LN R
Sbjct: 662 KAASGVMLELEARGVRVDLQYCAASRVVESWPQALDLPDDDSAFYLPMRSLLKLNPLRDM 721
Query: 121 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL-YPNAVP- 178
+ R +P + FR+ R ++ WA+RRGVYS G+LGGI+ LL++ +C+L + A P
Sbjct: 722 HYLQRTIPDLATFRSAYRFIKTWAQRRGVYSAKLGYLGGIHITLLLSSVCKLSFQKAGPL 781
Query: 179 --SMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCM 236
+ ++ FFR Y Q++W ++ G PR + ++ I+T P +
Sbjct: 782 SAADMICTFFRHYAQFQWDRTIVY------DPGFYKTAPRYFRTSREPIV-ILTQNTPKV 834
Query: 237 NSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEA--DVDWDTLFEPF-------TFFEAYK 287
N + S + R + EF+R M++ A ++ W L F +Y
Sbjct: 835 NVARAASLPSARTLEQEFKR-------MDRQLASPEITWAGLLGAAGSSSGVEDFLTSYP 887
Query: 288 NYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 339
+Y ++++ A R GW+E R L + I+R + L P F+D
Sbjct: 888 SYAKVNVQYWGAGAAKGRLLVGWLEWRCVSLLVDIQRR-FPDLHARIWPARFTD 940
>gi|392870452|gb|EAS32255.2| hypothetical protein CIMG_03182 [Coccidioides immitis RS]
Length = 1241
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 184/419 (43%), Gaps = 64/419 (15%)
Query: 5 LPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPV 62
+ +VL+ +G V P +D+D L +GP + FF Q L + + L V
Sbjct: 674 IAMVLVPVGSYGLGVWSPSSDVDCLSIGP---ISSKIFFAIAEQRLRRAADSGIRILRKV 730
Query: 63 PDAHVPVMKFKFSGVSIDLLY---ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRV 119
A +++ + +G+ DL Y AR+ L D I + Q + L R
Sbjct: 731 KAATGTMIELEVNGIKCDLQYCPAARVVEGWQRISLSPPDDPIF-DLSYQALTKLQAFRD 789
Query: 120 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV-- 177
D I R +P + FRT R + WAK RGVY + G+LGGI+ ++++R+ +L+ V
Sbjct: 790 LDYIRRSIPDLAAFRTAHRFITAWAKHRGVYLSRFGYLGGIHITMMLSRVFKLFCGEVRV 849
Query: 178 -PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP---RRNPKDKYHL---MPIIT 230
+ ++ RFF+ Y + W + V+DP P+ + + M I+T
Sbjct: 850 TSTDMIYRFFQYYADFDWEHKT-------------VFDPFFFESTPRYRRYANEPMVILT 896
Query: 231 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL-------FEPF-TF 282
P +N + + + R +++E +R ++ ++ D+ W L EP F
Sbjct: 897 INVPLINVA-RATAGSARTIVEELRRMAQLM-----SDPDMTWSKLLNSTVSTLEPSEEF 950
Query: 283 FEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF--- 337
AY +Y++I + + + GW+ESR +L I+R ++ P F
Sbjct: 951 LTAYSSYIKIHVQYWGISLAKGKTLLGWLESRCVRLLNDIDRKLPSIY-ARMWPARFSSK 1009
Query: 338 ---SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS--MYTLRKPGMQI 391
SD S+ C Y +GL +++ EG + +T +E KQ++ M L K QI
Sbjct: 1010 DAMSDDSEYQGC-YLIGLTKRE----TEGTE---AMTKEERKQSLDLMMRVLEKFKTQI 1060
>gi|389628670|ref|XP_003711988.1| hypothetical protein MGG_06121 [Magnaporthe oryzae 70-15]
gi|351644320|gb|EHA52181.1| hypothetical protein MGG_06121 [Magnaporthe oryzae 70-15]
gi|440474755|gb|ELQ43479.1| DUF455 domain-containing protein [Magnaporthe oryzae Y34]
gi|440487378|gb|ELQ67170.1| DUF455 domain-containing protein [Magnaporthe oryzae P131]
Length = 1238
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 149/348 (42%), Gaps = 51/348 (14%)
Query: 7 LVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP-----EVTELHP 61
++++ +G V +DID LC+GP ++ FF Q + + E+ L
Sbjct: 662 IIMVPVGSWGLGVSTLSSDIDCLCIGPLSSST---FFALTTQRIKKASVESGLEIKLLRR 718
Query: 62 VPDAHVPVMKFKFSGVSIDLLY----ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGC 117
V +++ + V +DL Y A W P L + + + QT+ L
Sbjct: 719 VRANSGVMLELEVMSVRVDLQYCAATAVAEQW--PAVLKLPPNDPIFALPAQTLGKLKAL 776
Query: 118 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN-- 175
R D + +P + FR R ++ WA+ RG+YS G+LGGI ++L+AR+C+L
Sbjct: 777 RDLDYLRETIPDLSKFRLAHRAIKTWAQSRGIYSAKFGYLGGIQVSILLARVCKLLARDY 836
Query: 176 ----AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 231
+VP +L S FF Y + W N + L R+ ++ ++ P
Sbjct: 837 GQEVSVPDIL-SSFFSHYASFDWRNKIAFDPFFHKKLNY-----LRSAREPLAILGFFPP 890
Query: 232 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT---------- 281
A +N++ + +++ + E + +E+ NE + WDT F +
Sbjct: 891 A---LNTTLAATVPSMKAIARELSQANELL-----NEDGMTWDTFFGASSAGGDKTHSLA 942
Query: 282 -----FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIER 322
F +YK++++I++ + + GW+ESR L + + R
Sbjct: 943 RGAADFLSSYKSFVKIELQYWGISLSKGSQFIGWLESRCPLLLVDMSR 990
>gi|451855249|gb|EMD68541.1| hypothetical protein COCSADRAFT_178345 [Cochliobolus sativus ND90Pr]
Length = 1226
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 159/381 (41%), Gaps = 47/381 (12%)
Query: 5 LPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM--PEVTELHPV 62
+PLV++ +G V +DID LC+G + + FF Q L + P+V L V
Sbjct: 659 IPLVIVPVGSYALGVWTSSSDIDCLCIG---SISSKTFFKLARQRLVKAGNPQVRILRKV 715
Query: 63 PDAHVPVMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVT 120
+++ +G+ +D+ Y + V E DI + N ++R L R
Sbjct: 716 EATTGTMLELSVNGILMDMQYCPAAQVVERWSEFADIPASDPIFNLSMLSLRKLKPYRDL 775
Query: 121 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 180
+ R +P FR R ++ W +RG+Y+ G+LGG++ L+++ +C+ + V S+
Sbjct: 776 LYLQRTIPSRSLFRQAYRLIKLWGVQRGLYAAKFGYLGGMHITLMLSWVCKSLAHDVGSV 835
Query: 181 ----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCM 236
+V FF+ Y + W N ++ A PR N + M I++ P
Sbjct: 836 NVADIVVSFFQHYANFDWSNDMVYDAF------FHKKKPRYN-RSTREPMVILSFHAPNS 888
Query: 237 NSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT--------------F 282
N + + L++++ EF+ M+ +E + W F + F
Sbjct: 889 NFAQKSTVPGLQMLIKEFKAAD-----MKLSEPGMTWQKFFSTSSDLALKPCLPSGVVEF 943
Query: 283 FEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKI-------ERHTYNMLQCHPH 333
AY ++++IDI + GWVESR + + I E + L
Sbjct: 944 LNAYSDFVKIDIQFWGRMLAKGKGLVGWVESRCISIVVDIHKALPGSEVRVWPALFTDDA 1003
Query: 334 PGDFSDKSKPLYCSYFMGLQR 354
P D +D + C Y +GL +
Sbjct: 1004 PNDSTDSNDFQGC-YLIGLSK 1023
>gi|452004284|gb|EMD96740.1| hypothetical protein COCHEDRAFT_1220308 [Cochliobolus heterostrophus
C5]
Length = 1226
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 160/381 (41%), Gaps = 47/381 (12%)
Query: 5 LPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM--PEVTELHPV 62
+PLV++ +G V +DID LC+G + + FF Q L + P+V L V
Sbjct: 659 IPLVIVPVGSYALGVWTSSSDIDCLCIG---SISSKTFFKLARQRLVKAGNPQVRILRKV 715
Query: 63 PDAHVPVMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVT 120
A +++ +G+ +DL Y + V E +I + N ++R L R
Sbjct: 716 EAATGTMLELSINGILMDLQYCPAAQVVERWSELAEIPASDPIFNLSMLSLRKLKPYRDL 775
Query: 121 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 180
+ R +P FR R ++ WA +RG+Y+ G+LGG++ L+++ +C+ + V S+
Sbjct: 776 LYLQRTIPSRSIFRQAYRLIKLWAVQRGLYAAKFGYLGGMHITLMLSWVCKSLAHNVGSV 835
Query: 181 ----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCM 236
+V FF+ Y + W N ++ A PR N + M I++ P
Sbjct: 836 SIADIVVSFFQHYANFDWSNDMVYDAF------FHKKKPRYN-RSAREPMVILSFHAPNS 888
Query: 237 NSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF--------EP------FTF 282
N + + L+ ++ E + M+ +E + W F EP F
Sbjct: 889 NFAQKSTVPGLQTLIKELKAAD-----MKLSEPGMTWQKFFSTSSDLASEPRLPYGAVEF 943
Query: 283 FEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKI-------ERHTYNMLQCHPH 333
Y ++++IDI ++ GWVESR + + I E + L
Sbjct: 944 LNTYNDFVKIDIQFWGRMLAKGKSLVGWVESRCISIVVDIHKALPGSEVRVWPALFTDDA 1003
Query: 334 PGDFSDKSKPLYCSYFMGLQR 354
P D +D + C Y +GL +
Sbjct: 1004 PNDSTDSNDFQGC-YLIGLSK 1023
>gi|159109295|ref|XP_001704913.1| Hypothetical protein GL50803_13749 [Giardia lamblia ATCC 50803]
gi|157432988|gb|EDO77239.1| hypothetical protein GL50803_13749 [Giardia lamblia ATCC 50803]
Length = 674
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 88/174 (50%), Gaps = 6/174 (3%)
Query: 1 MPRYLPLV-LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTEL 59
MPR LV L G ++ P +D+DT+ + P++ R DFF + ++ +MP+V+
Sbjct: 151 MPRSERLVRLYPFGSYYLGINEPSSDVDTVVIFPQYV-RIADFFDKFPTIIGQMPQVSYF 209
Query: 60 HPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCR- 118
+ DA VP++ + V DL A +++ + + + N E+++ SLNG R
Sbjct: 210 DCIRDAKVPLITLTYDSVDFDLSAAVMAVNRVTDAIPFLDPECTANMHEKSILSLNGYRT 269
Query: 119 ---VTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 169
V Q F+ +R +R W KR+ +YSN GF GGIN +LVA +
Sbjct: 270 NIHVKSQFAGNNIFYSTFQNAVRALRLWCKRKNIYSNRCGFFGGINCIILVANV 323
>gi|302499068|ref|XP_003011530.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
gi|291175082|gb|EFE30890.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
Length = 1209
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 151/352 (42%), Gaps = 57/352 (16%)
Query: 6 PLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVP 63
PLVLI +G GP +D+D LC+G A FF Q L + + + V
Sbjct: 646 PLVLIPVGSYGLGTWGPRSDVDCLCIG---AISSTTFFALAIQRLRKASALGIRIVRKVK 702
Query: 64 DAHVPVMKFKFSGVSIDLLYARLS--------LWVIPEDLDISQDSILQNADEQTVRSLN 115
A +++ + + +DL Y + + IP S D I + ++ L
Sbjct: 703 AATGVMLELQSGHIKLDLQYCPAANVAERWQEISRIP-----SHDPIF-DLSLHSLSKLQ 756
Query: 116 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL--- 172
R + I R+VP + FR RC+ AK GVYS+ G LGGI+ ++++++ QL
Sbjct: 757 PYRDQEYIKRMVPDMYVFRLAYRCIVQRAKSSGVYSSKFGLLGGIHITMMLSQLHQLVHE 816
Query: 173 -YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 231
+ LVS FF Y + W N +++ S G+Q RR+ ++ M I+T
Sbjct: 817 KFGRVTVPELVSMFFHYYAHFDWKNNMVV------SPGVQT-RYRRSLREP---MVILTV 866
Query: 232 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT---------- 281
P +N + V+ +LR ++ F R E+ E W + +
Sbjct: 867 HVPTINVARAVTAPSLRTIVSAFNRAEELM-----GEDGARWSNILNDISISHNNQTGAE 921
Query: 282 -FFEAYKNYLRIDI-----SAENADDLRNWKGWVESRLRQLTLKIERHTYNM 327
F AY +Y+++++ S A L GW+ESR +L ++R +
Sbjct: 922 KFLTAYNSYIKVNVQYWGPSPTQASSL---IGWLESRFFRLLNDLDRQALGI 970
>gi|296820870|ref|XP_002850004.1| DUF455 domain-containing protein [Arthroderma otae CBS 113480]
gi|238837558|gb|EEQ27220.1| DUF455 domain-containing protein [Arthroderma otae CBS 113480]
Length = 1204
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 132/306 (43%), Gaps = 33/306 (10%)
Query: 6 PLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVP 63
PLVLI +G GP +DID LC+GP FF Q L + + + V
Sbjct: 646 PLVLIPVGSYGLGTWGPNSDIDCLCIGP---ISTSTFFSLAIQRLKKASAHGIRIMRKVK 702
Query: 64 DAHVPVMKFKFSGVSIDLLYARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRV 119
A +++ + + +DL Y + W E I + + ++ L R
Sbjct: 703 AATGMMLELQAGNIKLDLQYCPAANIAKRW--QEATKIPPHDPIFDLSIYSLSKLQPFRD 760
Query: 120 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN---- 175
+ I R+VP + F+ RC+ WAK GVYS+ G LGGI+ ++++R+ QL
Sbjct: 761 QEYIKRMVPDMYVFQLAHRCITLWAKTSGVYSSKFGLLGGIHITMMLSRLHQLLHEDIGR 820
Query: 176 -AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 234
VP +L + FF Y + W N V+ + +P M I+T P
Sbjct: 821 VTVPELL-TMFFHHYANFDWKNKVVDSPGTRSKYRRLLREP----------MVILTVHIP 869
Query: 235 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE------PFTFFEAYKN 288
+N + V+ S+LR ++ F+R E+ ++V DT F AY +
Sbjct: 870 TINVARAVTASSLRTIISAFKRVEELLAEDGARWSNVLSDTSISHNNQTGAEKFLVAYNS 929
Query: 289 YLRIDI 294
Y+++++
Sbjct: 930 YIKVNV 935
>gi|407410523|gb|EKF32925.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 285
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 115/238 (48%), Gaps = 27/238 (11%)
Query: 146 RRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWR----WPNPVLLC 201
RR VY N+ + G+ A++VAR+CQ+ P + P++L+ FF Y QW +PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARVCQVMPASHPNVLLRFFFLFYAQWLSRHDRISPVYIT 61
Query: 202 AIEE--GSL-GL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 257
E G + GL WDPRR+ + L+P+I PAYP +N + NVS L + E
Sbjct: 62 TSLESRGRIPGLPDSWDPRRD-ACRDDLLPVINPAYPYVNDARNVSRCGLEVFYAELTYA 120
Query: 258 HEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD------LRNWKGWVES 311
H + + ++ +T+++PF + Y + ++++ E + L W +V S
Sbjct: 121 HRLL-----SNSETPLETIWKPFNILDNYSTFFVVNVTCEEETEEKLEAVLSVWSSYVLS 175
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSD---KSKPLYCSYFMGLQRKQGVPVGEGEQF 366
+LR L +ER ++ P+P +D +S P + G G+ G +F
Sbjct: 176 KLRILLYALER----IVDARPYPQKLNDVPLRSVPKSGCFLKGSSFIVGIREKVGRRF 229
>gi|308160310|gb|EFO62803.1| Poly(A) polymerase, putative [Giardia lamblia P15]
Length = 617
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 171/434 (39%), Gaps = 99/434 (22%)
Query: 1 MPRYLPLV-LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTEL 59
MPR LV L G ++ P +D+DT+ + P++ R DFF + ++ +MP+V+
Sbjct: 94 MPRSERLVRLYPFGSYYLGINEPSSDVDTVVIFPQYV-RIVDFFDKFPTIIGQMPQVSYF 152
Query: 60 HPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCR- 118
+ DA VP++ + V DL A +++ + + + N E+++ SLNG R
Sbjct: 153 DCIRDAKVPLITLTYDSVDFDLSAAVMAVNRVTDAIPFLDPECTANMHEKSILSLNGYRT 212
Query: 119 ---VTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR------- 168
V Q F+ +R +R W KR+ +YSN GF GGIN +LVA
Sbjct: 213 NIHVKSQFAGNNIFYSTFQNAVRALRLWCKRKNIYSNRCGFFGGINCIILVANVMLRSSF 272
Query: 169 ------------------------------------------ICQLYPNAVPSMLVSRFF 186
I +L + ++ + +
Sbjct: 273 ELLQSDVEQKNMEYQLSSSITQNDPTNPSDLQSPYIQYNSDSILELRESVPLTLWLYNIY 332
Query: 187 RVYTQWRW-------PNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSS 239
Y++ W PNPV A S+ Q W R KDK M ++T P NS+
Sbjct: 333 YYYSRLDWSTKAIQLPNPVQASAATRLSMTAQSW--IRRDKDK---MCLLTAVEPYFNST 387
Query: 240 YNVSTSTLRIMMDEFQRG-HEICEAMEKNEADVD--------------WDTLF--EPFTF 282
+ +T ++ F+ G I + + A WDT F + F
Sbjct: 388 DKIFETTFDTILANFRHGVKAILDIVRGVVAAYSFGLEIARPLLRPSLWDTFFYDDSLEF 447
Query: 283 FE--AYK---NYLRID---ISAENADDLRNWKGWVESRL----RQLTLKIERHTYN---M 327
F Y+ YL I +S+ + +L K ++ESR+ R+L ++ N +
Sbjct: 448 FSNPGYRPNIMYLLITRNVMSSNSMVELDKVKSFLESRINRICRRLLTNLQPAVGNNARL 507
Query: 328 LQCHPHPGDFSDKS 341
++ HP P + S
Sbjct: 508 IRVHPLPTWYDSTS 521
>gi|407849942|gb|EKG04508.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 285
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 24/208 (11%)
Query: 146 RRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN----PVLLC 201
RR VY N+ + G+ A++VARICQ+ P + P++L+ FF YTQW + PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYIT 61
Query: 202 AIEE--GSL-GL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 257
E G + GL WDPRR+ + L+P+I PAYP +N + NV +L + E
Sbjct: 62 TSLESRGRIPGLPDSWDPRRD-ACRDDLLPVINPAYPYVNDARNVGRCSLEVFYAELTYA 120
Query: 258 HEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD------LRNWKGWVES 311
+ + +E +T++EP+ + Y + + ++ E ++ L W +V S
Sbjct: 121 YRLLSNLE-----TPLETIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLS 175
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSD 339
+LR L +ER ++ P+P +D
Sbjct: 176 KLRILLYALER----LVDARPYPQKLND 199
>gi|320039014|gb|EFW20949.1| hypothetical protein CPSG_02791 [Coccidioides posadasii str.
Silveira]
Length = 1241
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 183/419 (43%), Gaps = 64/419 (15%)
Query: 5 LPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPV 62
+ +VL+ +G V P +D+D L +GP + FF Q L + + L V
Sbjct: 674 IAMVLVPVGSYGLGVWSPSSDVDCLSIGP---ISSKIFFAIAEQRLRRAADSGIRILRKV 730
Query: 63 PDAHVPVMKFKFSGVSIDLLY---ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRV 119
A +++ + +G+ DL Y AR+ L D I + Q + L R
Sbjct: 731 KAATGTMIELEVNGIKCDLQYCPAARVVEGWQRISLSPPDDPIF-DLSYQALTKLQAFRD 789
Query: 120 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV-- 177
D I R +P + FR R + WAK RGVY + G+LGGI+ ++++R+ +L+ V
Sbjct: 790 LDYIRRSIPDLAAFRKAHRFITAWAKHRGVYLSRFGYLGGIHITMMLSRVFKLFCGEVRV 849
Query: 178 -PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP---RRNPKDKYHL---MPIIT 230
+ ++ RFF+ Y + W + V+DP P+ + + M I+T
Sbjct: 850 TSTDMIYRFFQYYADFDWEHET-------------VFDPFFFESTPRYRRYANEPMVILT 896
Query: 231 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL-------FEPF-TF 282
P +N + + + R +++E +R ++ ++ D+ W L EP F
Sbjct: 897 INVPLINVA-RATAGSARTIVEELRRMAQLM-----SDPDMTWSKLLNSTVSTLEPSEEF 950
Query: 283 FEAYKNYLRIDISAENADDLRN--WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF--- 337
AY +Y++I + + GW+ESR +L I+R ++ P F
Sbjct: 951 LTAYSSYIKIHVQYWGISLAKGKMLLGWLESRCVRLLNDIDRKLPSIY-ARIWPARFSSK 1009
Query: 338 ---SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT--LRKPGMQI 391
SD S+ C Y +GL ++ E E+ + +T +E KQ++ + T L K QI
Sbjct: 1010 DAMSDDSEYQGC-YLIGLTKR------ETERTEA-MTKEERKQSLDLMTRVLEKFKTQI 1060
>gi|303317898|ref|XP_003068951.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240108632|gb|EER26806.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1241
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 183/419 (43%), Gaps = 64/419 (15%)
Query: 5 LPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPV 62
+ +VL+ +G V P +D+D L +GP + FF Q L + + L V
Sbjct: 674 IAMVLVPVGSYGLGVWSPSSDVDCLSIGP---ISSKIFFAIAEQRLRRAADSGIRILRKV 730
Query: 63 PDAHVPVMKFKFSGVSIDLLY---ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRV 119
A +++ + +G+ DL Y AR+ L D I + Q + L R
Sbjct: 731 KAATGTMIELEVNGIKCDLHYCPAARVVEGWQRISLSPPDDPIF-DLSYQALTKLQAFRD 789
Query: 120 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV-- 177
D I R +P + FR R + WAK RGVY + G+LGGI+ ++++R+ +L+ V
Sbjct: 790 LDYIRRSIPDLAAFRKAHRFITAWAKHRGVYLSRFGYLGGIHITMMLSRVFKLFCGEVRV 849
Query: 178 -PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP---RRNPKDKYHL---MPIIT 230
+ ++ RFF+ Y + W + V+DP P+ + + M I+T
Sbjct: 850 TSTDMIYRFFQYYADFDWEHET-------------VFDPFFFESTPRYRRYANEPMVILT 896
Query: 231 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL-------FEPF-TF 282
P +N + + + R +++E +R ++ ++ D+ W L EP F
Sbjct: 897 INVPLINVA-RATAGSARTIVEELRRMAQLM-----SDPDMTWSKLLNSTVSTLEPSEEF 950
Query: 283 FEAYKNYLRIDISAENADDLRN--WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF--- 337
AY +Y++I + + GW+ESR +L I+R ++ P F
Sbjct: 951 LTAYSSYIKIHVQYWGISLAKGKMLLGWLESRCVRLLNDIDRKLPSIY-ARIWPARFSSK 1009
Query: 338 ---SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT--LRKPGMQI 391
SD S+ C Y +GL ++ E E+ + +T +E KQ++ + T L K QI
Sbjct: 1010 DAMSDDSEYQGC-YLIGLTKR------ETERTEA-MTKEERKQSLDLMTRVLEKFKTQI 1060
>gi|327357117|gb|EGE85974.1| DUF455 domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 1251
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 184/453 (40%), Gaps = 78/453 (17%)
Query: 2 PRYLPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTEL 59
PR L +V+ +G V +D+D LCVG + + FF Q L + E V L
Sbjct: 675 PR-LSIVVTTVGSYGLGVWTDSSDVDCLCVG---SISSKVFFELTLQRLKKGAEWDVKIL 730
Query: 60 HPVPDAHVPVMKFKFSGVSIDLLY----ARLSLWVIPEDLDISQDSILQNADEQTVRSLN 115
V A +++ + + V DL Y A W+ E + + S L + + L
Sbjct: 731 RKVKAATGTMLELEINSVKFDLQYCPAAAVAERWL--EVPHLPRSSPLFDLALLPLMKLQ 788
Query: 116 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 175
R + R VP FR R ++ WAK RG+YS+ G+LGGI+ ++++++ +L P+
Sbjct: 789 PYRDQAYLQRTVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPS 848
Query: 176 AVPSM----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK-DKYHLMP--- 227
P+ ++ FF Y + W V+ +DP + K +YH P
Sbjct: 849 PAPATSAADILCTFFNYYGNFNWKEDVM-------------YDPSFHKKPPRYHRTPQEG 895
Query: 228 --IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT---- 281
I+T P MN + + S + R ++DE +R + +E + +W L
Sbjct: 896 MVILTLHAPVMNVARSASIPSTRTIVDEMKRADNLI-----SEGNTNWAELVGIVANTGK 950
Query: 282 ---------FFEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQC 330
F +Y +Y++I++ + + GW+ESR L + R + +Q
Sbjct: 951 SSLSVSGDEFLRSYNSYIKINVQYWGLSLAKGSSLVGWLESRCLVLLADLHRK-FPDIQT 1009
Query: 331 HPHPGDFS-----DKSKP------LYCSYFMGLQRKQGV--PVGEGEQFDIRL------- 370
P F+ D S P Y +GL + + P + D +L
Sbjct: 1010 RIWPARFTQIEDHDDSTPAQEEREYQGCYLIGLTKAEHATDPTRTLSKSDRKLAHDTLQA 1069
Query: 371 TVKEFKQAVSMYT--LRKPGMQISVAHVTRRNL 401
++ +F + Y + V+HV + NL
Sbjct: 1070 SIDQFASNIHNYKKYFDSASAWVDVSHVKQGNL 1102
>gi|71409419|ref|XP_807056.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70870970|gb|EAN85205.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 285
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 104/208 (50%), Gaps = 24/208 (11%)
Query: 146 RRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWR----WPNPVLLC 201
RR VY N+ + G+ A++VARICQ+ P + P++L+ FF YTQW +PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYIT 61
Query: 202 AIEE--GSL-GL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 257
E G + GL WDPRR+ + L+P+I PAYP +N + NV L + E
Sbjct: 62 TSLESRGRIPGLPDSWDPRRD-ACRDDLLPVINPAYPYVNDARNVGRCGLEVFYAELTYA 120
Query: 258 HEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD------LRNWKGWVES 311
+ + +E +T++EP+ + Y + + ++ E ++ L W +V S
Sbjct: 121 YRLLSNLE-----TPLETIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLS 175
Query: 312 RLRQLTLKIERHTYNMLQCHPHPGDFSD 339
+LR L +ER ++ P+P +D
Sbjct: 176 KLRILLYALER----IVDARPYPQKLND 199
>gi|261191320|ref|XP_002622068.1| DUF455 domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239589834|gb|EEQ72477.1| DUF455 domain-containing protein [Ajellomyces dermatitidis SLH14081]
Length = 1266
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 166/398 (41%), Gaps = 69/398 (17%)
Query: 2 PRYLPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTEL 59
PR L +V+ +G V +D+D LCVG + + FF Q L + E V L
Sbjct: 675 PR-LSIVVTTVGSYGLGVWTDSSDVDCLCVG---SISSKVFFELTLQRLKKGAEWDVKIL 730
Query: 60 HPVPDAHVPVMKFKFSGVSIDLLY----ARLSLWV-IPEDLDISQDSILQNADEQTVRSL 114
V A +++ + + V DL Y A W+ +P + + S L + + L
Sbjct: 731 RKVKAATGTMLELEINSVKFDLQYCPAAAVAERWLEVPH---LPRSSPLFDLALLPLMKL 787
Query: 115 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 174
R + R VP FR R ++ WAK RG+YS+ G+LGGI+ ++++++ +L P
Sbjct: 788 QPYRDQAYLQRTVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLP 847
Query: 175 NAVP----SMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK-DKYHLMP-- 227
+ P + ++ FF Y + W V+ +DP + K +YH P
Sbjct: 848 SPAPVTSAADILCTFFNYYGNFNWKEDVM-------------YDPSFHKKPPRYHRTPQE 894
Query: 228 ---IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT--- 281
I+T P MN + + S + R ++DE +R + +E + +W L
Sbjct: 895 GMVILTLHAPVMNVARSASIPSTRTIVDEMKRADNLI-----SEGNTNWAELVGIVANTG 949
Query: 282 ----------FFEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQ 329
F +Y +Y++I++ + + GW+ESR L + R + +Q
Sbjct: 950 KSSLSVSGDEFLRSYNSYIKINVQYWGLSLAKGSSLVGWLESRCLVLLADLHRK-FPDIQ 1008
Query: 330 CHPHPGDFS-----DKSKP------LYCSYFMGLQRKQ 356
P F+ D S P Y +GL + +
Sbjct: 1009 TRIWPARFTQIEDHDDSTPAQEEREYQGCYLIGLTKAE 1046
>gi|154282695|ref|XP_001542143.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410323|gb|EDN05711.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1178
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 117/509 (22%), Positives = 200/509 (39%), Gaps = 81/509 (15%)
Query: 7 LVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPD 64
+V+ +G V +DID LCVG A FF + Q L + V + V
Sbjct: 640 IVVTTVGSSGLGVWTESSDIDCLCVGSISANV---FFELIIQRLRNRIDLGVKIIRRVKP 696
Query: 65 AHVPVMKFKFSGVSIDLLY----ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVT 120
A +++ + +G+ DL Y A W+ E ++ Q S L N L R
Sbjct: 697 AFGTMLELEINGIKFDLQYCPAAAVAKRWL--EVPNLPQSSPLFNLSLIPRMKLQPYRDQ 754
Query: 121 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 180
+ R + FR R ++ WAK RG+YS+ G+LGGI+ L+++R+ +L P S
Sbjct: 755 AYLQRTIRNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLMKLLPPNPGSA 814
Query: 181 --LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNS 238
++ FF Y + W + I P RN + M I T P +N
Sbjct: 815 ADILCTFFNHYGNFNWEKDAVYDPIFHEK-------PPRNYRPPREGMIIFTLHTPIINV 867
Query: 239 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF-------------TFFEA 285
+ + S ++R ++DE +R + +E + +W L + F ++
Sbjct: 868 ARSTSIPSMRKIVDEMKRAENLI-----SEGNANWAELLGVYPKPGKSALSSSADEFLKS 922
Query: 286 YKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS----- 338
Y +Y++I++ + + + GWVESR L + R + +Q P F+
Sbjct: 923 YNSYIKINVQYWSLSLAKGSSLVGWVESRCLDLLNDLYRE-FPDIQARIWPARFTQNEEH 981
Query: 339 DKSKP------LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQIS 392
+ S P Y +GL++ D T +F + ++ TL + M S
Sbjct: 982 ENSTPAQEEHEYQGCYLVGLRKAD-------HATDPTRTFSKFDRKLAQNTL-QASMDQS 1033
Query: 393 VAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVD 452
VA + N K + SR +L R+ + DD + D
Sbjct: 1034 VASSVQSN----------------KKYFQSRLSLGRRFGNF-----DDNEAATEADSISS 1072
Query: 453 THLRNAKCHATMPSSSGEFREGSPIMSTI 481
T + + P S+ + R S I++ +
Sbjct: 1073 TRKKGTFLSTSKPVSTAKLRPASDILNRL 1101
>gi|83774635|dbj|BAE64758.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 457
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 123/262 (46%), Gaps = 45/262 (17%)
Query: 125 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM---- 180
R +P + +FR R ++ WA+RRG+YS+ G+LGGI+ LL+ARIC L ++
Sbjct: 6 RTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAAD 65
Query: 181 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY 240
+++ FF+ Y Q+ W V+ S + + P+R P + I++ P +N +
Sbjct: 66 IITTFFKHYAQFNWEKQVVYDPSFYKS-PPRYFRPQREP------LVILSQHQPKVNVAR 118
Query: 241 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL---FEPFT----FFEAYKNYLRID 293
S + R ++ EFQR ++ ++ DV W+ L E T F ++Y++Y +++
Sbjct: 119 AASIPSTRTLVQEFQRADKLL-----SQQDVTWEQLAGSIENSTGADEFLKSYRSYAKVN 173
Query: 294 IS--AENADDLRNWKGWVESRLRQLTLKIER-HTYNMLQCHPH-----------PGDFSD 339
+ A R GW+E R ++L + R H Q H H P F+D
Sbjct: 174 VQYWGGAATKGRMLVGWLEWRC--VSLLVGRLHPLPTFQRHIHRKFPDIHARIWPARFTD 231
Query: 340 ------KSKPLYCSYFMGLQRK 355
+K Y +GL R+
Sbjct: 232 MEEVGETTKEYQGCYLIGLTRE 253
>gi|164429482|ref|XP_001728545.1| hypothetical protein NCU11050 [Neurospora crassa OR74A]
gi|157073494|gb|EDO65454.1| predicted protein [Neurospora crassa OR74A]
Length = 1368
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 147/348 (42%), Gaps = 43/348 (12%)
Query: 6 PLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQML---TEMPEVTELHP- 61
PL++ +G VH +DID L +GP T FF Q L + P ++ H
Sbjct: 780 PLIITPVGSFALGVHTSSSDIDVLAIGPFSTT---TFFSLAIQRLRRASSSPLYSQEHQP 836
Query: 62 -----VPDAHVPVMKFKFSGVSIDLLYARL----SLWVIPEDLDISQ-DSILQNADEQTV 111
+ + +++ + DL Y S W P L + + + + T+
Sbjct: 837 KILRRISSSTGTMLELSLCQIKFDLQYCPAAHIASHW--PRILSTAPPGNAVWSLPALTL 894
Query: 112 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 171
L R D + R VP + FR R +R WAK RGVY+ G+LGGI ++++AR+ +
Sbjct: 895 TKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISVMLARVYK 954
Query: 172 LYP-------NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY- 223
LV+ FF Y Q+ W ++ +E L++ + K+ Y
Sbjct: 955 ALALGAGGVSGVGVEELVASFFEEYAQFDWEKDMVY---DEVCPWLRLKREKGGEKEVYR 1011
Query: 224 ----HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE- 278
M ++ P +N+S S ++R + DEF+R ++ + K E W +
Sbjct: 1012 RTGREAMVVLGWFGPGLNTSGQASVWSVRTLKDEFKRARDL---LVKGEVK-SWKEFLKG 1067
Query: 279 --PFTFFEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIER 322
F YK+Y+++D+ + + GW+ESR L + + R
Sbjct: 1068 SGAEEFLTGYKSYVKVDVQYWGLSSSKGAQFVGWLESRCVMLLVDLHR 1115
>gi|396483666|ref|XP_003841760.1| similar to DUF455 domain-containing protein [Leptosphaeria maculans
JN3]
gi|312218335|emb|CBX98281.1| similar to DUF455 domain-containing protein [Leptosphaeria maculans
JN3]
Length = 1224
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 161/390 (41%), Gaps = 64/390 (16%)
Query: 7 LVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPD 64
L ++ +G V +D+D LCVG + + FF + Q L + L V
Sbjct: 653 LNMVAVGSYALGVWTADSDLDCLCVG---SVSSKTFFKLVRQRLARARNRGIKILRKVEA 709
Query: 65 AHVPVMKFKFSGVSIDLLY---ARLS-LWVIPEDLDISQDSILQNADEQTVRSLNGCRVT 120
+++ G+S DL Y AR++ W E +S + N ++R L R
Sbjct: 710 KTGTMLELSVDGISADLHYCPAARIAERW--SEFHGLSASDPIFNLPALSLRKLKSYRDF 767
Query: 121 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC-----QLYPN 175
I R +P + FRT RC++ WA +RG+YS+ G+L G + L++ IC Q
Sbjct: 768 LYIQRTLPSLSAFRTAFRCIKLWAVQRGIYSSKFGYLSGTHITLMLTWICKKLRYQSGSV 827
Query: 176 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM---PIITPA 232
P M+VS FF Y + W N +L A S + +YH P++
Sbjct: 828 GPPDMVVS-FFSYYANFDWTNELLFDAFFHES------------RPRYHRSAREPMVILG 874
Query: 233 Y--PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF-EPFT-------- 281
Y P N ++ +T L+I+M+EF+ ++ + + W F +P +
Sbjct: 875 YHAPHSNIAHTSTTPGLQILMNEFRAAADVLSS-----PGITWAKFFGDPSSLKDSVQLH 929
Query: 282 -------FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP 332
F +++ +++ + GW+ESR L + I + L+
Sbjct: 930 LSQMTEHFLATQHSFVTVEMQYWGRTLAKGKGLVGWIESRCLSLVVDIHK-MLPELEVRI 988
Query: 333 HPGDFS-DKS-----KPLYCSYFMGLQRKQ 356
P F+ DK+ K + Y +GL R +
Sbjct: 989 WPTRFTNDKADLKELKEYHGCYLIGLTRSE 1018
>gi|336268012|ref|XP_003348771.1| hypothetical protein SMAC_01794 [Sordaria macrospora k-hell]
gi|380094029|emb|CCC08246.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1302
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 148/347 (42%), Gaps = 42/347 (12%)
Query: 6 PLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQML---TEMPEVTELHP- 61
PL++ +G VH +DID L +GP FF Q L + P + P
Sbjct: 714 PLIITPVGSFALGVHTSSSDIDVLAIGPFSTN---TFFSLAIQRLRRASSSPLFSSYQPK 770
Query: 62 ----VPDAHVPVMKFKFSGVSIDLLYARL----SLWVIPEDLDISQ-DSILQNADEQTVR 112
+ + +++ + + DL Y S W P L + + + + T+
Sbjct: 771 ILRRIYSSTGTMLELSVNQIKFDLQYCPAAHIASNW--PRILSTAPPGNAVWSLPALTLT 828
Query: 113 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI--- 169
L R D + R VP + FRT R +R WAK RGVY+ G+LGGI ++++AR+
Sbjct: 829 KLKAARDLDYLRRTVPDLAVFRTAHRAVRSWAKARGVYAQRFGYLGGIQISVMLARVYKA 888
Query: 170 ---CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI-----EEGSLGLQVWDPRRNPKD 221
Q LV+ FF Y ++ W ++ + ++ G + RR ++
Sbjct: 889 LALTQGVTRVGVEELVASFFEEYARFHWGRDMVYDEVCPWFRQKREKGGEKEVYRRTSRE 948
Query: 222 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 281
M ++ P +N+S S ++R + +EF+R + + K E W E +
Sbjct: 949 A---MVVLGWFGPGLNTSGQASVWSVRTLKEEFERAR---DQLVKEEVR-SWKEFLEGSS 1001
Query: 282 ----FFEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIER 322
F YK+Y+++D+ R + GW+ESRL L + + R
Sbjct: 1002 AAEEFLTGYKSYVKVDVQYWGLSPSRGAQFVGWLESRLVMLLVDLHR 1048
>gi|346325053|gb|EGX94650.1| DUF455 domain protein [Cordyceps militaris CM01]
Length = 1223
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 149/351 (42%), Gaps = 35/351 (9%)
Query: 7 LVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPD 64
LVL+ +G V +D+D LC+G + FF Q L + + + L V
Sbjct: 649 LVLVPVGSFGLGVWMSSSDVDCLCIG---TISSKTFFRMALQRLRKASDQGIRVLRKVLA 705
Query: 65 AHVPVMKFKFSGVSIDLLY-ARLSLW-VIPEDLDISQDSILQNADEQTVRSLNGCRVTDQ 122
+++ + G+ DL Y A S++ P +++ + + QT+ L R
Sbjct: 706 NTGTMLELQILGIKFDLHYCAATSVFEKFPSVMNLPSNHPEFSLPVQTLAKLKPARDMYY 765
Query: 123 ILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ----LYPNAVP 178
+LR +P + FR ++ WA RG+Y G LGGI+ +L+ IC+ L
Sbjct: 766 LLRSIPDLAKFRVAFLMIKAWASSRGIYGARFGLLGGIHITVLLVPICKQLATLSRVVST 825
Query: 179 SMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNS 238
+ +++ FF YT + W V+L L R ++ + L+ PA +N+
Sbjct: 826 TGILATFFSHYTNFDWEKQVVLDPFFHKELRYH-----RTSREPFCLLGWHAPA---LNT 877
Query: 239 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF--------TFFEAYKNYL 290
+ ST T++ + E + + + ++ V WD + P F +K+Y+
Sbjct: 878 AMTASTPTVKSIATEISKTNSLL-----SQPGVTWDAILGPVGAAVAGVQDFLRGFKSYV 932
Query: 291 RIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 339
++D + R + GW+ESR + + + R +L PG F D
Sbjct: 933 KVDARFWGSSPSSGRKFLGWLESRCVAILVDMNRKAPALLP-RIWPGRFID 982
>gi|361066261|gb|AEW07442.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142733|gb|AFG52754.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142735|gb|AFG52755.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142737|gb|AFG52756.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142739|gb|AFG52757.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142741|gb|AFG52758.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142743|gb|AFG52759.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142745|gb|AFG52760.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142747|gb|AFG52761.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142749|gb|AFG52762.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142751|gb|AFG52763.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142753|gb|AFG52764.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142755|gb|AFG52765.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142757|gb|AFG52766.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142759|gb|AFG52767.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
Length = 104
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 48/55 (87%)
Query: 363 GEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 417
GEQFDIR+TV EF+ +V MYTL KPGM+I+V+H+ RR++P+FVFPGGVRP R +K
Sbjct: 1 GEQFDIRVTVDEFRHSVKMYTLWKPGMEINVSHIKRRSIPSFVFPGGVRPPRTTK 55
>gi|407922599|gb|EKG15696.1| Endonuclease/exonuclease/phosphatase [Macrophomina phaseolina MS6]
Length = 1142
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 147/367 (40%), Gaps = 39/367 (10%)
Query: 69 VMKFKFSGVSIDLLYARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 124
+++ G+ +DL Y + W P L + L + QT+ L R +
Sbjct: 645 MLELNIQGIRLDLQYCAAAQIAGCW--PAPLSLPPTDPLFSLPLQTLSKLKAIRDLAHLQ 702
Query: 125 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA----VPSM 180
P + F+ R + WA+ RG+Y+ G+L G + +L++ RI +L ++ +
Sbjct: 703 NTTPDLPAFQMAYRLLVVWARSRGIYAARFGYLSGTHISLMLDRIAKLLYHSNRDVTAAD 762
Query: 181 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY--PCMNS 238
LV FFR Y ++ W + + G+ P ++ P++ Y P +N
Sbjct: 763 LVCAFFRYYAEFDWSKNTVEDPLARAIPGMG------RPYQRHASEPMVVLGYHIPRVNI 816
Query: 239 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF-----EPFTFFEAYKNYLRID 293
+ + + ++ +E QR H + + + W + F AY++Y+R+D
Sbjct: 817 ARAATVPAVGVLTEELQRAHALVTKQPEQGSTPTWAEIIGEERNSAAEFLSAYRSYIRVD 876
Query: 294 ISAENADDL--RNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----SDKSKPLYCS 347
+ + R GWVESR L + + R + P F S++ +
Sbjct: 877 VQYWGTSSVKGRQLIGWVESRCPTLLIDLNRKIPE-IHARMWPLRFARGASNEKGDQHGC 935
Query: 348 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ---------ISVAHVTR 398
Y +GL ++Q + D +L + + ++ + G + + V+HV+R
Sbjct: 936 YLVGLAKRQDSDSDSKTEADRKLAQSKLDGVLERFSDQIRGNEKFFDPTSGWVEVSHVSR 995
Query: 399 RNLPNFV 405
L +
Sbjct: 996 AKLEELI 1002
>gi|225561466|gb|EEH09746.1| DUF455 domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 1256
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 149/355 (41%), Gaps = 41/355 (11%)
Query: 7 LVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPD 64
+V+ +G V +DID LCV A FF + Q L + V + V
Sbjct: 681 IVVTTVGSSGLGVWTESSDIDCLCVSSISANV---FFELIIQRLRNRIDLGVKIIRRVKP 737
Query: 65 AHVPVMKFKFSGVSIDLLY----ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVT 120
A +++ + +G+ DL Y A W+ E ++ Q S L N L R
Sbjct: 738 AFGTMLELEINGIKFDLQYCPAAAVAERWL--EVPNLPQSSPLFNLSLIPRMKLQPYRDQ 795
Query: 121 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 180
+ R + FR R ++ WAK RG+YS+ G+LGGI+ L+++R+ +L P S
Sbjct: 796 AYLQRTIQNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLMKLLPPNPGSA 855
Query: 181 --LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNS 238
++ FF Y + W + I G P RN + M I T P +N
Sbjct: 856 ADILCTFFNHYGNFNWGKDAVYDPIFHGK-------PPRNYRPPREGMIIFTLHTPIINV 908
Query: 239 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF-------------TFFEA 285
+ + S ++R ++DE +R + +E + +W L + F ++
Sbjct: 909 ARSTSIPSMRKIVDEMKRAENLI-----SEGNANWAELLGIYPKTGKSALSSSADEFLKS 963
Query: 286 YKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 338
Y +Y++I++ + + + GWVESR L + R + +Q P F+
Sbjct: 964 YNSYIKINVQYWSLSLAKGSSLVGWVESRCLDLLDDLYRE-FPDIQARIWPARFT 1017
>gi|302882405|ref|XP_003040113.1| hypothetical protein NECHADRAFT_50338 [Nectria haematococca mpVI
77-13-4]
gi|256720980|gb|EEU34400.1| hypothetical protein NECHADRAFT_50338 [Nectria haematococca mpVI
77-13-4]
Length = 1208
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 172/414 (41%), Gaps = 65/414 (15%)
Query: 7 LVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPD 64
L+L+ +G V +DID LC+G + + FF Q L + L V
Sbjct: 642 LILVPVGSYGLGVWTSSSDIDCLCIG---SISPKIFFALAVQRLRRAVTGGIRILRRVKA 698
Query: 65 AHVPVMKFKFSGVSIDLLY-ARLSL---WVIPEDLDISQDSILQNADEQTVRSLNGCRVT 120
+++ + G+ +DL Y A S+ W PE + QT+ L R
Sbjct: 699 NSGYMLELEVHGIKMDLQYCAAASIAERW--PEVMKRPASDPAFALPFQTLAKLKPVRDL 756
Query: 121 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 180
+ R +P + +R ++ WA+ RG+YS GFLGGI+ ++L+A +C++ N ++
Sbjct: 757 FYLRRSIPDMVQYRMAHLFIKAWAQSRGIYSAKFGFLGGIHISVLLAPLCKMLANDGATV 816
Query: 181 ----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM---PIITPAY 233
++ FF+ Y ++ W + V+DP + +Y+ P+ +
Sbjct: 817 STADIIFTFFQHYARFSWKTAL-------------VFDPFFHKDLRYNRTFREPLCLLGW 863
Query: 234 --PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF--EPFT-------- 281
P +N++ N S T+ + EF+R + + W L EP +
Sbjct: 864 HAPALNTAVNASVPTVDAIAAEFERAERLLSV-----ENFSWSNLLGVEPDSPPSSLSGP 918
Query: 282 ----FFEAYKNYLRIDISAENADDLRNWK--GWVESRLRQLTLKIERHTYNMLQCHPHPG 335
F + YK+Y++ID ++ + GW+ESR L + ++R N + P
Sbjct: 919 GATEFLQNYKSYIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDLDRKVKN-IHARIWPA 977
Query: 336 DFSDKSKPL-------YCSYFMGLQRKQGVPV---GEGEQFDIRLTVKEFKQAV 379
F D + + + Y +GL R P + Q ++ ++EF+ +
Sbjct: 978 RFLDMASSVEGPGTEYHGHYLIGLSRNGEEPNKDDAKATQVALQAALQEFEARI 1031
>gi|310792019|gb|EFQ27546.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola
M1.001]
Length = 1198
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 158/388 (40%), Gaps = 70/388 (18%)
Query: 7 LVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPD 64
++L+ +G +DID LC+G + FF Q L + E V L V
Sbjct: 634 VMLVPVGSYGLGTWSRTSDIDCLCIG---SISPRIFFTLARQRLRKSGESGVRLLRKVKA 690
Query: 65 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE-------QTVRSLNGC 117
+++ + G+ DL Y + P +D D + + + QT+ L
Sbjct: 691 KTGTMLEVEVMGIKCDLQYCQ-----APSVVDQWPDMLKRPPSDPAFSLPMQTLLKLKPA 745
Query: 118 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ--LYPN 175
R + R +P + FR + + ++ WAK RG+Y+ G+LGGI+ ++++ ++C+ L
Sbjct: 746 RDLFYLQRSIPDLAQFRVSFQAIKTWAKSRGIYAAKFGYLGGIHLSVMLVKVCKMLLRVG 805
Query: 176 AVPSM--LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP-----I 228
V S +++ FF Y+++ W N V V+DP + +YH P +
Sbjct: 806 GVVSAVDIITTFFDHYSRFDWQNDV-------------VFDPFFHKNLRYHRTPREAMCL 852
Query: 229 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEAD-VDWDTLF---------- 277
+ P +N++ S T++I+ E+C A + D W +L
Sbjct: 853 LGWHSPTLNTALIASVPTVKII------SAELCHAATQLSGDGASWQSLLSIPDSSQDRN 906
Query: 278 ---EPFTFFEAYKNYLRIDISAENADDLRNWK--GWVESRLRQLTLKIERHTYNMLQCHP 332
F +Y++++ + I A R + GW+ESR L + I R L
Sbjct: 907 MTPSASKFLGSYRSFVNLRIHYWGASLERGSRLVGWLESRCASLLVDINRRVPE-LSARI 965
Query: 333 HPGDFSDKSKP--------LYCSYFMGL 352
P F D P SY +GL
Sbjct: 966 WPARFVDSLTPEADETRGDYQGSYLIGL 993
>gi|429849228|gb|ELA24631.1| duf455 domain-containing protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 1201
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 157/385 (40%), Gaps = 63/385 (16%)
Query: 7 LVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFG-ELHQMLTEMPE-VTELHPVPD 64
LVL+ +G V +DID LC+G + FF H++ + E V L V
Sbjct: 632 LVLVPVGSYGLGVWSKSSDIDCLCIG---SISPRVFFTLARHRLRKSVGEGVRILRQVKA 688
Query: 65 AHVPVMKFKFSGVSIDLLYARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRVT 120
+++ + G+ DL Y + + W P L + QT+ L R
Sbjct: 689 KTGTMLEIEVLGLRCDLQYCQAASVANQW--PNLLKRPPSDAAFSLPTQTLLKLKPARDM 746
Query: 121 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 180
I R VP + FR + ++ WAK G+Y+ G+LGG++ ++++ R+C++ + + ++
Sbjct: 747 YYIARSVPDLAQFRVCYQVIKTWAKANGIYAAKFGYLGGVHLSVMLVRVCKMLLHGMGTV 806
Query: 181 ----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP-----IITP 231
+++ FF Y + W N + V+DP + + +YH P ++
Sbjct: 807 STADVIATFFDHYAHFDWKNDI-------------VFDPFFHKQLRYHRTPREAMCLLGW 853
Query: 232 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE------------- 278
P +N++ S T++I+ E + +A K W ++
Sbjct: 854 HSPTLNTALIASVPTVKIISTELR------QANAKFTEGATWQSILSAPGMIAEKDLSQG 907
Query: 279 PFTFFEAYKNY--LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGD 336
+F ++K + LRI + + GW+ESR L + I R L P
Sbjct: 908 AASFLSSFKTFVNLRIHYWGGSLERGSRLVGWLESRCASLLVDINRKVPE-LAPRIWPAR 966
Query: 337 FSDKSKP--------LYCSYFMGLQ 353
F D + P SY +GL+
Sbjct: 967 FVDAATPNSQCQQSEYQGSYLVGLK 991
>gi|342879986|gb|EGU81216.1| hypothetical protein FOXB_08249 [Fusarium oxysporum Fo5176]
Length = 1207
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 150/353 (42%), Gaps = 54/353 (15%)
Query: 7 LVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPD 64
+++ +G V +DID LC+GP + + FF Q L V L V
Sbjct: 646 FIVVPVGSYGLGVWTSSSDIDCLCIGPFSS---KTFFALAVQRLKRATTLGVRILRRVKA 702
Query: 65 AHVPVMKFKFSGVSIDLLY-ARLSL---WVIPEDLDISQDSILQNADEQTVRSLNGCRVT 120
+++ + +G+ +DL Y A S+ W PE + Q + L R
Sbjct: 703 NSGNMLELEVNGIKVDLQYCAAASIAERW--PEVMKRPASDPAFALSFQALAKLKPVRDL 760
Query: 121 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ--LYPN--A 176
+ R +P + +R ++ WA+ RG+YS GFLGGI+ ++L+ +C+ Y N
Sbjct: 761 FYLRRSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVPVCKAVAYENETV 820
Query: 177 VPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL-----MPIITP 231
P+ +V FF Y+++ W N + V+DP + + +Y+ + +I
Sbjct: 821 TPADIVVTFFHYYSEFDWKNSM-------------VFDPFFHKELRYNRTFREPLCLIGW 867
Query: 232 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF--EPFT-------- 281
P +N++ S T+ + EF R + ++ D W L EP T
Sbjct: 868 HAPALNTAPIASIPTVATISSEFGRAKRML-----SDDDCIWGKLLGIEPETALGSVQAP 922
Query: 282 ----FFEAYKNYLRIDISAENADDLRNWK--GWVESRLRQLTLKIERHTYNML 328
F A+K Y++ID ++ + GW+ESR L + I R ++L
Sbjct: 923 AATEFLHAFKTYIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDINRKLKHLL 975
>gi|350292383|gb|EGZ73578.1| hypothetical protein NEUTE2DRAFT_108297 [Neurospora tetrasperma FGSC
2509]
Length = 1330
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 146/350 (41%), Gaps = 47/350 (13%)
Query: 6 PLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE-----------MP 54
PL++ +G VH +DID L +GP T FF Q L P
Sbjct: 742 PLIITPVGSFALGVHTSSSDIDVLAIGPFSTT---TFFSLAIQRLRRAASSPLYSQEYQP 798
Query: 55 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL----SLWVIPEDLDISQ-DSILQNADEQ 109
++ L + + +++ + DL Y S W P L + + + +
Sbjct: 799 KI--LRRISSSTGTMLELSLCQIKFDLQYCPAAHIASHW--PRILSTAPPGNAVWSLPAL 854
Query: 110 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 169
T+ L R D + R VP + FR R +R WAK RGVY+ G+LGGI ++++AR+
Sbjct: 855 TLTKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISVMLARV 914
Query: 170 CQLYP-------NAVPSMLVSRFFRVYTQWRWPNPVLLCAI-----EEGSLGLQVWDPRR 217
+ LV+ FF Y Q+ W ++ + ++ G + +R
Sbjct: 915 YKALALGAGGVSGVGVEELVASFFEEYAQFDWEKDMVYDEVCPWFRQKREKGGEKEVYKR 974
Query: 218 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF 277
++ M ++ P +N+S S ++R + +EF+R ++ + K E W
Sbjct: 975 TGREA---MVVLGWFGPGLNTSGQASVWSVRTLKEEFKRARDL---LVKGEVK-SWKEFL 1027
Query: 278 E---PFTFFEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIER 322
+ F YK+Y+++D+ + + GW+ESR L + + R
Sbjct: 1028 KGSGAEEFLTGYKSYVKVDVQYWGLSSSKGAQFVGWLESRCVMLLVDLHR 1077
>gi|336471290|gb|EGO59451.1| hypothetical protein NEUTE1DRAFT_79561 [Neurospora tetrasperma FGSC
2508]
Length = 1329
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 146/350 (41%), Gaps = 47/350 (13%)
Query: 6 PLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE-----------MP 54
PL++ +G VH +DID L +GP T FF Q L P
Sbjct: 741 PLIITPVGSFALGVHTSSSDIDVLAIGPFSTT---TFFSLAIQRLRRAASSPLYSQEYQP 797
Query: 55 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL----SLWVIPEDLDISQ-DSILQNADEQ 109
++ L + + +++ + DL Y S W P L + + + +
Sbjct: 798 KI--LRRISSSTGTMLELSLCQIKFDLQYCPAAHIASHW--PRILSTAPPGNAVWSLPAL 853
Query: 110 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 169
T+ L R D + R VP + FR R +R WAK RGVY+ G+LGGI ++++AR+
Sbjct: 854 TLTKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISVMLARV 913
Query: 170 CQLYP-------NAVPSMLVSRFFRVYTQWRWPNPVLLCAI-----EEGSLGLQVWDPRR 217
+ LV+ FF Y Q+ W ++ + ++ G + +R
Sbjct: 914 YKALALGAGGVSGVGVEELVASFFEEYAQFDWEKDMVYDEVCPWFRQKREKGGEKEVYKR 973
Query: 218 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF 277
++ M ++ P +N+S S ++R + +EF+R ++ + K E W
Sbjct: 974 TGREA---MVVLGWFGPGLNTSGQASVWSVRTLKEEFKRARDL---LVKGEVK-SWKEFL 1026
Query: 278 E---PFTFFEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIER 322
+ F YK+Y+++D+ + + GW+ESR L + + R
Sbjct: 1027 KGSGAEEFLTGYKSYVKVDVQYWGLSSSKGAQFVGWLESRCVMLLVDLHR 1076
>gi|340521883|gb|EGR52117.1| predicted protein [Trichoderma reesei QM6a]
Length = 1224
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 157/385 (40%), Gaps = 57/385 (14%)
Query: 7 LVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPD 64
LV+I +G V +D+D LCVG FF Q L + + L V
Sbjct: 658 LVVIPVGSFGLGVWTSSSDVDCLCVG---NISSRTFFALAIQKLRKASANGIKILRRVKA 714
Query: 65 AHVPVMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQ 122
+++ + G+ DL Y + PE + Q++ L R
Sbjct: 715 NSGTMLELEIRGIKFDLQYCSAAAIAQGYPEVFKRPSSDPIFALPLQSLAKLKPARDLFY 774
Query: 123 ILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN----AVP 178
+ R +P + +R ++ WAK RG+Y+ G LGGI+ ++ +C+ N A
Sbjct: 775 LRRSIPDMTKYRVAHLVIKAWAKSRGLYAAKFGLLGGIHITSMLVPVCKALANEPEAAST 834
Query: 179 SMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM---PIITPAY-- 233
+ +++ FF Y+ + W V V+DP + + +YH P+ +
Sbjct: 835 ADVLTSFFHHYSTFDWATGV-------------VYDPFYHTELRYHRTFREPLCLLGWHG 881
Query: 234 PCMNSSYNVSTSTLRIMMDEFQRGHEICE----------AMEKNEADVDWDTLFE--PFT 281
P +N++ + S ST+ + EF R + +E++E+ +L E
Sbjct: 882 PSLNTASSASISTVNALASEFTRAATLLSQEGMTWSKFLGVEQSESP---SSLLEKGAAD 938
Query: 282 FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 339
F ++Y+ Y++I + R + GW+ESRL + + I R + ++ P F+D
Sbjct: 939 FLDSYRTYIKISARYWGSSQQKGRKYLGWLESRLISILVDISRKSPGIVP-RIWPARFTD 997
Query: 340 KSKP----------LYCSYFMGLQR 354
+ + L Y +GL++
Sbjct: 998 EEQSSSNTDAENPELTACYLIGLKK 1022
>gi|46805331|dbj|BAD16850.1| unknown protein [Oryza sativa Japonica Group]
Length = 62
Score = 82.4 bits (202), Expect = 8e-13, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 38/43 (88%)
Query: 137 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 179
LRC++ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYPN P+
Sbjct: 2 LRCVKHWAKARGVYSNVAGFLGGIGWAILVARVCQLYPNTSPA 44
>gi|46110072|ref|XP_382094.1| hypothetical protein FG01918.1 [Gibberella zeae PH-1]
Length = 1200
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 153/363 (42%), Gaps = 51/363 (14%)
Query: 6 PLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDA 65
P V++ +G V +DID LC+GP + + FF Q L ++ + V
Sbjct: 639 PFVVVPVGSYGLGVWTSSSDIDCLCIGPFSS---KTFFALAVQRLKRAADIRIIRRVKAN 695
Query: 66 HVPVMKFKFSGVSIDLLY-ARLSL---WVIPEDLDISQDSILQNADEQTVRSLNGCRVTD 121
+++ + G+ +DL Y A S+ W PE + + QT+ L R
Sbjct: 696 SGYMLELEVHGIKVDLQYCAAASIAERW--PEVMKRPANDSAFALPFQTLAKLKPVRDLF 753
Query: 122 QILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA----V 177
+ R +P + +R ++ WA+ RG+YS GFLGGI+ ++L+ IC+ +
Sbjct: 754 YLRRSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVPICKALASGSETVS 813
Query: 178 PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL-----MPIITPA 232
P+ +V FFR Y+ + W + V+DP + +Y+ + +I
Sbjct: 814 PTDIVVTFFRHYSNFDWKTSM-------------VFDPFFHKDLRYNRTFREPLCLIGWH 860
Query: 233 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF------------EPF 280
P +N++ S T+ + E +R + + +E W+++
Sbjct: 861 APALNTAPIASNPTVMTIAAEIERANRLL-----SENGCTWNSVLGLQSAQEAGKSRGAT 915
Query: 281 TFFEAYKNYLRIDISAENADDLRNWK--GWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 338
F + +K Y++ID ++ + GW+ESR L + + R +++ P F
Sbjct: 916 EFLKEFKTYIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDVNRKLQHLV-ARIWPSRFL 974
Query: 339 DKS 341
D S
Sbjct: 975 DTS 977
>gi|358389108|gb|EHK26701.1| hypothetical protein TRIVIDRAFT_59177 [Trichoderma virens Gv29-8]
Length = 1215
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 166/425 (39%), Gaps = 77/425 (18%)
Query: 4 YLPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHP 61
++ LVLI +G V +DID LCVG + FF Q L + + L
Sbjct: 646 HVQLVLIPVGSFGLGVWTSLSDIDCLCVG---NISSKTFFSLAVQKLKKASTSGIKILRR 702
Query: 62 VPDAHVPVMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRV 119
V +++ + G+ DL Y + P+ L + + Q++ L R
Sbjct: 703 VMANTGTMLELEIHGIRFDLQYCAAAAIAQGYPDVLKRPASDPVFSLPVQSIAKLKPARD 762
Query: 120 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN---- 175
+ R +P + +R ++ WA+ RG+YS G LGGI+ L+ +C+ N
Sbjct: 763 LVYLRRSIPDMTKYRVAHLFIKAWAQSRGLYSAKFGLLGGIHITSLLVPVCKALANEPEA 822
Query: 176 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM---PIITPA 232
A + +++ FF Y+ + W V V+DP + KYH P+
Sbjct: 823 ASTADILTSFFYHYSTFDWETGV-------------VFDPFYHRDLKYHRTFREPLCLLG 869
Query: 233 Y--PCMNSSYNVSTSTLRIMMDEFQRGHEICEA--------------------MEKNEAD 270
+ P +N++ + S ST+ + E R + +EK AD
Sbjct: 870 WHGPSLNTASSASISTVNALASELTRAAALLSQDGMTWSKFLGLELSGTPSSLIEKGAAD 929
Query: 271 VDWDTLFEPFTFFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNML 328
F ++Y+ Y++I + R + GW+ESR + + I R T ++
Sbjct: 930 -----------FLDSYQTYIKISARYWGSSQQKGRKYLGWLESRFISILVDISRKTLGLV 978
Query: 329 QCHPHPGDF---------SDKSKPLYCSYFMGLQ-----RKQGVPVGEGEQFDIRLTVKE 374
P F SD++ L Y +GL+ + + +IR+ ++E
Sbjct: 979 P-RIWPARFIDEDQTSGTSDENSELSACYLIGLKWVDSIADKSATSQAAAEGNIRVILQE 1037
Query: 375 FKQAV 379
F+ V
Sbjct: 1038 FESRV 1042
>gi|56785136|dbj|BAD81791.1| unknown protein [Oryza sativa Japonica Group]
Length = 62
Score = 82.0 bits (201), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 38/43 (88%)
Query: 137 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 179
LRC++ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYPN P+
Sbjct: 2 LRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPA 44
>gi|408391246|gb|EKJ70626.1| hypothetical protein FPSE_09136 [Fusarium pseudograminearum CS3096]
Length = 1200
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 149/350 (42%), Gaps = 50/350 (14%)
Query: 6 PLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDA 65
P V++ +G V +DID LC+GP + + FF Q L ++ + V
Sbjct: 639 PFVVVPVGSYGLGVWTSSSDIDCLCIGPFSS---KTFFALAVQRLKRAADIRIIRRVKAN 695
Query: 66 HVPVMKFKFSGVSIDLLY-ARLSL---WVIPEDLDISQDSILQNADEQTVRSLNGCRVTD 121
+++ + G+ +DL Y A S+ W PE + + QT+ L R
Sbjct: 696 SGYMLELEVHGIKVDLQYCAAASIAERW--PEVMKRPANDSAFALPFQTLAKLKPVRDLF 753
Query: 122 QILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA----V 177
+ R +P + +R ++ WA+ RG+YS GFLGGI+ ++L+ IC+ +
Sbjct: 754 YLRRSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVPICKALASGSEIVS 813
Query: 178 PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL-----MPIITPA 232
P+ +V FFR Y+ + W + V+DP + +Y+ + +I
Sbjct: 814 PTDIVVTFFRHYSNFDWKTSM-------------VFDPFFHKDLRYNRTFREPLCLIGWH 860
Query: 233 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF------------EPF 280
P +N++ S T+ + E +R + + +E W+++
Sbjct: 861 APALNTAPIASNPTVMAIAAEIERANRLL-----SEDGCTWNSVLGLQSAQEAGKSRGAT 915
Query: 281 TFFEAYKNYLRIDISAENADDLRNWK--GWVESRLRQLTLKIERHTYNML 328
F + +K Y++ID ++ + GW+ESR L + + R +++
Sbjct: 916 EFLKEFKTYVKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDVNRKLQHLV 965
>gi|169617838|ref|XP_001802333.1| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15]
gi|160703499|gb|EAT80511.2| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15]
Length = 1179
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 150/383 (39%), Gaps = 73/383 (19%)
Query: 5 LPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPD 64
+P++++ +G V G+DID LC+G + FF Q L + D
Sbjct: 655 VPMIIVPVGSYALGVWTSGSDIDCLCIG---TISSKTFFKLARQRLVK---------AHD 702
Query: 65 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 124
V V++ K + +L +P I SIL ++R L R I
Sbjct: 703 QGVRVLR-KVEANTGTMLELWSEFAGLPASDPIFNLSIL------SLRKLKPYRDLLYIQ 755
Query: 125 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM---- 180
R +P + FR RC++ WA RRG+YS G+LGG++ L+++ + + S+
Sbjct: 756 RTLPSLSAFRLAYRCIKLWAVRRGIYSAKFGYLGGVHITLMLSWAAKCLAHDSGSITAPD 815
Query: 181 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL-----MPIITPAYPC 235
LVS FF + + W N ++ A K +YH M ++ P
Sbjct: 816 LVSSFFHHFAHFNWTNDMMYDAF------------FHKQKPRYHRSAREPMVVLGFHAPN 863
Query: 236 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF-----------EPFT--- 281
N ++ + L ++ E + E ++ + W F P +
Sbjct: 864 SNIAHTSTLPGLHTLVSEMKAADEAL-----SDPSMTWKKFFGSTDNSPQAALSPISGAS 918
Query: 282 -FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNM---LQCHPHPG 335
F A+ +Y++IDI ++ GWVESR L + I Y M L P
Sbjct: 919 DFLSAHSSYVKIDIQFWGRTLAKGKSLVGWVESRCLSLVVDI----YKMLPDLAVRIWPA 974
Query: 336 DFSD----KSKPLYCSYFMGLQR 354
F+D + + Y +GL R
Sbjct: 975 RFTDSDTIEGGDYHGCYLIGLSR 997
>gi|367045862|ref|XP_003653311.1| hypothetical protein THITE_2047808 [Thielavia terrestris NRRL 8126]
gi|347000573|gb|AEO66975.1| hypothetical protein THITE_2047808 [Thielavia terrestris NRRL 8126]
Length = 1221
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 146/366 (39%), Gaps = 55/366 (15%)
Query: 24 ADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDL 81
+DID LC+GP +FF Q L + + L V +++ + G+ +DL
Sbjct: 663 SDIDVLCIGP---FSTHNFFALASQRLRKAAGQGIRILRRVRANTGTMLEIEVDGIKMDL 719
Query: 82 LYARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 137
Y + W P L + + QT+ L R D I R VP + FR
Sbjct: 720 QYCPATSVAERW--PHVLQTPASDPVWSLSAQTLSKLKAVRDVDYIRRSVPDLAAFRLAH 777
Query: 138 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY-----PNAVPSMLVSRFFRVYTQW 192
R ++ WAK RG+YS GFL GI ++L+AR+ +L P +V +L + FF Y +
Sbjct: 778 RFIKTWAKSRGIYSARFGFLSGIQISILLARVQKLLARESGPCSVEDLLAT-FFTHYAAF 836
Query: 193 RWPNPVLLCAIEEGSLGLQVWDP----RRNPKDKYHLMPIITPAY--PCMNSSYNVSTST 246
W +DP R P + P+ Y P +N++ S +
Sbjct: 837 DWS-------------ARPAFDPLFHRHRLPYTRTPREPLAVLGYFPPSLNTAAAASVPS 883
Query: 247 LRIMMDEFQR-GHEICEAMEKNEADVDWD-----------TLFEPFTFFEAYKNYLRIDI 294
++ + EF+R G + + + D F A+++Y+R+D+
Sbjct: 884 VKTLAAEFRRAGAAFLSSSSSSSSSSSSDPHPARSWSSLAAPSAASDFLAAHRSYVRLDV 943
Query: 295 SAENADDLRNWK--GWVESRLRQLTLKIERHTYNMLQCHPHPGDF----SDKSKPLYCSY 348
R + GW+ESR L + + R L PG F ++ + Y
Sbjct: 944 QYWGLPRARGAQLLGWLESRCAALLVDLHRRAPG-LHARMWPGRFVEEEEEEERDFRGCY 1002
Query: 349 FMGLQR 354
+GL +
Sbjct: 1003 LIGLDK 1008
>gi|380475493|emb|CCF45225.1| endonuclease/Exonuclease/phosphatase [Colletotrichum higginsianum]
Length = 1195
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 169/417 (40%), Gaps = 69/417 (16%)
Query: 7 LVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM--PEVTELHPVPD 64
++L+ +G +DID LC+G + FF Q L + P V L V
Sbjct: 631 IMLVPVGSYGLGTWSRTSDIDCLCIG---SISPRVFFILARQRLRKSGNPGVRLLRKVKA 687
Query: 65 AHVPVMKFKFSGVSIDLLYAR----LSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVT 120
+++ + GV DL Y + + W P+ L + QT+ L R
Sbjct: 688 KTGTMLEVEILGVKCDLQYCQAPSVVEQW--PDMLKRPPSDPAFSLPMQTLLKLKPARDL 745
Query: 121 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ--LYPNAVP 178
+ R VP + FR + + ++ WAK RG+Y+ G+LGGI+ ++++ ++C+ L+ V
Sbjct: 746 FYLQRSVPDLAQFRMSFQAIKTWAKARGIYAAKFGYLGGIHLSVMLVKVCKMLLHDGGVV 805
Query: 179 SM--LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP-----IITP 231
S +++ FF Y+Q W + V+DP + KYH P ++
Sbjct: 806 STADIITTFFDHYSQLDWQRDM-------------VFDPFFHKNLKYHRTPREAMCLLGW 852
Query: 232 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEAD-VDWDTLFE------------ 278
P +N++ S T +I+ E+C+A + D W +L
Sbjct: 853 HSPTLNTALTASVPTTKII------SAELCQATTQLSRDGTSWQSLLSIPDSSHSKNMTP 906
Query: 279 -PFTFFEAYKNYLRIDISAENADDLRNWK--GWVESRLRQLTLKIERHTYNMLQCHPHPG 335
F ++++++ + + A R + GW+ESR L + + + L P
Sbjct: 907 GASNFLGSFRSFINLRVHYWGASLERGSRLVGWLESRCASLLVDVNKRVPE-LSARIWPA 965
Query: 336 DFSDKSKP--------LYCSYFMGLQ-----RKQGVPVGEGEQFDIRLTVKEFKQAV 379
F D S SY +GL+ K E ++R +++F++ +
Sbjct: 966 RFVDSSSSEAKGTQGDYQGSYLVGLEWMNSDEKPSKDDLEAAHSNLRAVLQQFEKLI 1022
>gi|358396858|gb|EHK46233.1| hypothetical protein TRIATDRAFT_89627 [Trichoderma atroviride IMI
206040]
Length = 1209
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 161/390 (41%), Gaps = 60/390 (15%)
Query: 7 LVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPD 64
LVLI +G V +DID LCVG +TR FF Q L + V L V
Sbjct: 645 LVLIPVGSFGLGVWTDLSDIDCLCVG-NISTRV--FFNLAVQKLRKASAEGVKILRRVMA 701
Query: 65 AHVPVMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQ 122
+++ + G+ DL Y + P+ L + QT+ L R
Sbjct: 702 NTGTMLELEIRGIKFDLQYCAAAAIAQGYPDVLKRPSSDPVFALPLQTLAKLKPARDLFY 761
Query: 123 ILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM-- 180
+ R +P + +R ++ WA+ RG+Y+ G LGGI+ + ++ IC+ N ++
Sbjct: 762 LRRSIPDMTKYRVAHLFIKAWAQSRGLYAAKYGMLGGIHISSMLVPICKALANESEAVST 821
Query: 181 --LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM---PIITPAY-- 233
+++ FF+ Y+++ W E G V+DP + KYH P+ +
Sbjct: 822 ADILTTFFQHYSKFNW---------ETG----MVFDPFYHLGLKYHRTFREPLCLLGWHG 868
Query: 234 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF------EPFT------ 281
P +N++ S ST+ + E R + ++ DV W P T
Sbjct: 869 PSLNAASTASISTVNALTSELVRAAALF-----HQQDVTWSRFLGLEQSATPLTLIEKGA 923
Query: 282 --FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 337
F +Y++Y++I + R + GW+ESR + + I R + +++ P F
Sbjct: 924 ADFLNSYRSYIKISARYWGSSQQKGRKYLGWLESRCISILVDISRKSPSLIP-RMWPARF 982
Query: 338 S---------DKSKPLYCSYFMGLQRKQGV 358
+ D++ L Y +GL+ + V
Sbjct: 983 ADEDPTNSTYDQTSELNACYLVGLKWDENV 1012
>gi|239612757|gb|EEQ89744.1| DUF455 domain-containing protein [Ajellomyces dermatitidis ER-3]
Length = 1266
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 156/369 (42%), Gaps = 58/369 (15%)
Query: 2 PRYLPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTEL 59
PR L +V+ +G V +D+D LCVG + + FF Q L + E V L
Sbjct: 675 PR-LSIVVTTVGSYGLGVWTDSSDVDCLCVG---SISSKVFFELTLQRLKKGAEWDVKIL 730
Query: 60 HPVPDAHVPVMKFKFSGVSIDLLY----ARLSLWV-IPEDLDISQDSILQNADEQTVRSL 114
V A +++ + + V DL Y A W+ +P + + S L + + L
Sbjct: 731 RKVKAATGTMLELEINSVKFDLQYCPAAAVAERWLEVPH---LPRSSPLFDLALLPLMKL 787
Query: 115 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 174
R + R VP FR R ++ WAK RG+YS+ G+LGGI+ ++++++ +L P
Sbjct: 788 QPYRDQAYLQRTVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLP 847
Query: 175 NAVPSM----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK-YHLMP-- 227
+ P+ ++ FF Y + W V+ +DP + K YH P
Sbjct: 848 SPAPAPSAADILCTFFNYYGNFNWKEGVM-------------YDPSFHKKPPLYHRTPQE 894
Query: 228 ---IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT--- 281
I+T P MN + + S + R ++DE +R + +E + +W L
Sbjct: 895 GMVILTLHAPVMNVARSASIPSTRTIVDEMKRADNLI-----SEGNTNWAELVGIVANTG 949
Query: 282 ----------FFEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQ 329
F +Y +Y++I++ + + GW+ESR L + R + +Q
Sbjct: 950 KSSLSVSGDEFLRSYNSYIKINVQYWGLSLAKGSSLVGWLESRCLVLLADLHRK-FPDIQ 1008
Query: 330 CHPHPGDFS 338
P F+
Sbjct: 1009 TRIWPARFT 1017
>gi|119186269|ref|XP_001243741.1| hypothetical protein CIMG_03182 [Coccidioides immitis RS]
Length = 1172
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 5 LPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPV 62
+ +VL+ +G V P +D+D L +GP + FF Q L + + L V
Sbjct: 674 IAMVLVPVGSYGLGVWSPSSDVDCLSIGP---ISSKIFFAIAEQRLRRAADSGIRILRKV 730
Query: 63 PDAHVPVMKFKFSGVSIDLLY---ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRV 119
A +++ + +G+ DL Y AR+ L D I + Q + L R
Sbjct: 731 KAATGTMIELEVNGIKCDLQYCPAARVVEGWQRISLSPPDDPIF-DLSYQALTKLQAFRD 789
Query: 120 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV-- 177
D I R +P + FRT R + WAK RGVY + G+LGGI+ ++++R+ +L+ V
Sbjct: 790 LDYIRRSIPDLAAFRTAHRFITAWAKHRGVYLSRFGYLGGIHITMMLSRVFKLFCGEVRV 849
Query: 178 -PSMLVSRFFRVYTQWRWPNPVLL 200
+ ++ RFF+ Y + W + +
Sbjct: 850 TSTDMIYRFFQYYADFDWEHKTVF 873
>gi|291441787|ref|ZP_06581177.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
14672]
gi|291344682|gb|EFE71638.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
14672]
Length = 973
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 129/338 (38%), Gaps = 40/338 (11%)
Query: 23 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 82
GAD+D + P D ++ +P+ T + V A VP ++ + + +DL+
Sbjct: 634 GADLDLVAALPGGV----DLADVRARVTAALPDGTRVRQVTGARVPGLRLRTGDLDVDLV 689
Query: 83 YARLSLWVIPEDLDISQDSILQNA--DEQTVRSLNGCRVTDQILRLVPKIQNFRTTL-RC 139
V LD + ++ + A D+ +L+ D + V T L R
Sbjct: 690 V------VATGTLDPGE-AVARRAELDQAAAIALSAVSDADAVRAAVGDHHTAFTRLARQ 742
Query: 140 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVL 199
++ WA RG+ S G L G+ W++L AR + ++ L+ FF + W W +PV
Sbjct: 743 VKAWAGARGLDSAPFGGLPGLAWSVLAARTAREATDSAAPDLLRHFFGTWAAWDWRDPVG 802
Query: 200 LCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE 259
L G P LM TP P N + V ++ DE R
Sbjct: 803 LAPTGTG------------PHTPVVLM---TPTDPVRNCTGQVGAGFRDLLTDELYRAWT 847
Query: 260 ICEAMEKNEADVD---WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL 316
I E AD D W L P + + + + + A++ G V RLR L
Sbjct: 848 ILE----TAADADTNPWPELLSPPSLHRRHAAWAVLTVRPGPAEEFEETSGRVRGRLRAL 903
Query: 317 TLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQR 354
+E P P F ++ P + Y +GL R
Sbjct: 904 LTALEDAGAADAYAWPRP--F--ETGPGFVRYAIGLGR 937
>gi|400596352|gb|EJP64126.1| endonuclease/Exonuclease/phosphatase protein [Beauveria bassiana
ARSEF 2860]
Length = 1233
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 149/376 (39%), Gaps = 46/376 (12%)
Query: 4 YLPLVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHP 61
++ L+L+ +G V +D LC+G + FF Q L + + + L
Sbjct: 653 HVGLILVPVGSYGLGVWTSSDHVDCLCIG---TMSSKTFFRMALQRLRKASDGGMRILRK 709
Query: 62 VPDAHVPVMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRV 119
+ ++K + G+ L Y + V P +++ D QT+ L R
Sbjct: 710 ASTSTGTMLKLQILGIKFTLHYCAATSIVEKYPRVMNLPSDHPEFALPVQTLAKLKPARD 769
Query: 120 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 179
+LR +P + FR ++ WA RG+Y G L GI+ +L+ IC+ A S
Sbjct: 770 LYYLLRSIPDLAKFRVAFLFIKAWASSRGIYGARFGLLSGIHITVLLVPICKQL--AAIS 827
Query: 180 MLVS------RFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY 233
M VS FF Y W V+L L R ++ + L+ PA
Sbjct: 828 MAVSTTDILTTFFSHYADLEWETHVVLDPFYHRELRYH-----RTSREPFCLLGWHAPA- 881
Query: 234 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT--------FFEA 285
+N++ ST T++ + E + + + ++ W T+ P + F +
Sbjct: 882 --LNTAMAASTPTVKSIAAELSKANSLL-----SQPGATWGTILGPASTAASGVRDFLQN 934
Query: 286 YKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK--- 340
+K+Y++ID + R + W+ESR + + R ++L PG F D+
Sbjct: 935 FKSYVKIDARFWGPSPSSGRKFLSWLESRCVAVLADMTRKAPSLLP-RLWPGRFIDRPNT 993
Query: 341 ----SKPLYCSYFMGL 352
+C Y +GL
Sbjct: 994 DTVTGSEYHCFYLIGL 1009
>gi|218200294|gb|EEC82721.1| hypothetical protein OsI_27409 [Oryza sativa Indica Group]
Length = 293
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 225 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 284
MPI+ P P + N++ T + + +E RG+ + + E D +W LF PF +
Sbjct: 92 FMPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTK--EPWRHDFEWVWLFAPFPYAT 149
Query: 285 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 321
Y+ +LRI + A +++LR+W GWV+SR R L LK+E
Sbjct: 150 KYEEFLRIALCAPTSEELRDWAGWVKSRFRNLILKLE 186
>gi|70917416|ref|XP_732847.1| poly(A) polymerase PAP [Plasmodium chabaudi chabaudi]
gi|56504096|emb|CAH75014.1| poly(A) polymerase PAP, putative [Plasmodium chabaudi chabaudi]
Length = 199
Score = 75.1 bits (183), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/114 (37%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
L G + V P +DID + + P++ TRE FF E + L + V +L +P+ + P
Sbjct: 86 LYTFGSYRLGVITPNSDIDCIFLAPQNVTRE-IFFNEFYLKLQQDRNVKKLQALPETYTP 144
Query: 69 VMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADEQTVRSLNGCRVTD 121
+++F + V IDLL A L + + + D IL+N DE TVRSLNG RV D
Sbjct: 145 IIQFMYDDVDIDLLLATLPYRTLKDCRYTLDNDYILKNLDEVTVRSLNGIRVAD 198
>gi|295664162|ref|XP_002792633.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278747|gb|EEH34313.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1260
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 152/357 (42%), Gaps = 45/357 (12%)
Query: 7 LVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPD 64
++ +G V +D+D LCVGP FF Q L + + V L V
Sbjct: 680 FIVTAVGSYGLGVWTNSSDVDCLCVGP---VSSRTFFELAMQRLRKGADSGVKILRKVKA 736
Query: 65 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQ----DSILQNADEQTVRSLNGCRVT 120
A + + + GV DL Y V L++S D + A V+ L R
Sbjct: 737 ATGTMWELEVRGVKFDLQYCPAGA-VAERWLEVSHLPRADPLFDLAYLSLVK-LQPHRDQ 794
Query: 121 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 180
+ R + FR R ++ WAK RG+YS+ G+LGGI+ L+++R+ +L P S+
Sbjct: 795 TYLQRTIQNPAMFRLLHRVIKAWAKSRGIYSSRFGYLGGIHITLMLSRLLKLLPPNTASV 854
Query: 181 --LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR--RNPKDKYHLMPIITPAYPCM 236
++ FF Y + W ++ I PR R+P++ M I+T YP M
Sbjct: 855 ADILRTFFNHYADFYWMEGMVYDMI------FHRKQPRYNRSPREG---MVILTLHYPIM 905
Query: 237 NSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF-------EPF------TFF 283
N + S S++R ++DE R + +E + W +L +P F
Sbjct: 906 NVARTASISSMRTIVDEMDRADTLI-----SEGRLRWTSLVGITPQAGQPTLSNSADEFL 960
Query: 284 EAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 338
++Y +Y++I++ + + GW+ESR L I R + LQ P F+
Sbjct: 961 KSYNSYIKINVQYWGLSLAKGSSLIGWLESRCLFLLADIHRKLPD-LQTRIWPARFT 1016
>gi|320590446|gb|EFX02889.1| duf455 domain containing protein [Grosmannia clavigera kw1407]
Length = 498
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 99/237 (41%), Gaps = 50/237 (21%)
Query: 135 TTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP-----------NAVPSMLVS 183
T R ++ WA+ RG+Y+ G+LGGI A+L+AR+ +L +AVP +L +
Sbjct: 52 TAYRSIKTWARSRGLYAARFGYLGGIQIAVLLARVMKLMAAATDDDDDDDSSAVPDILAT 111
Query: 184 RFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY--PCMNSSYN 241
FFR Y + W + G + P + P++ Y P +N+S +
Sbjct: 112 -FFRDYAGFDWATQMAFDPFFHG---------HKAPHVRTAGEPLVILGYHRPQLNTSMS 161
Query: 242 VSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE-------------------PFTF 282
S S++R++ E +R + A + WD TF
Sbjct: 162 ASVSSVRVLAAELRRADRLLSA-----GRISWDAFLGGGGDEGDSSTIVAGRLLSGAATF 216
Query: 283 FEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 337
AY+ Y++ID+ R ++ GW+ESR L + + R L H PG F
Sbjct: 217 VCAYRTYVKIDLQYWGLSLQRGASFVGWLESRCAMLLVDVARRL-PQLNTHIWPGRF 272
>gi|384498736|gb|EIE89227.1| hypothetical protein RO3G_13938 [Rhizopus delemar RA 99-880]
Length = 281
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 101/190 (53%), Gaps = 8/190 (4%)
Query: 75 SGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN-- 132
+ + +++ + RL L + ++ +S+LQ+ D+ ++ +++G R+ +Q + K N
Sbjct: 87 NNIEVNISFIRLKLERVTHRINFLDNSLLQDMDDASLATMDGPRL-NQFNKSQIKPSNVR 145
Query: 133 -FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR---ICQLYPNAVPSMLVSRFFRV 188
F+ +L+C+++WA +RG+Y+ G+L LL+ + Q ++++ FF++
Sbjct: 146 LFQVSLQCIKYWAIQRGLYNAEIGYLNETACTLLLIKTFMFIQSKEKLSITIILQNFFQM 205
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+++W W PV+L G ++ K +MPII+P YP + + V+ T +
Sbjct: 206 WSKWPWKTPVILTNHIPDKNGNKLEYSSITGSQK-AMMPIISPCYPVYSVTPYVTKLTQK 264
Query: 249 IMMDEFQRGH 258
+ EF+RG+
Sbjct: 265 TIQLEFERGN 274
>gi|240274573|gb|EER38089.1| DUF455 domain-containing protein [Ajellomyces capsulatus H143]
Length = 1256
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 149/355 (41%), Gaps = 41/355 (11%)
Query: 7 LVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPD 64
+V+ +G V +DID LCVG A FF + Q L + V + V
Sbjct: 681 IVVTTVGSSGLGVWTESSDIDCLCVGSISANV---FFELIIQRLRNRIDLGVKIIRRVKP 737
Query: 65 AHVPVMKFKFSGVSIDLLY----ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVT 120
A +++ + +G+ DL Y A W+ E ++ Q S L N L R
Sbjct: 738 AFGTMLELEVNGIKFDLQYCPAAAVAERWL--EVPNLPQSSPLFNLSLIPRMKLQPYRDQ 795
Query: 121 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 180
+ R + FR R ++ WAK RG+YS+ G+LGGI+ L+++R+ +L P S
Sbjct: 796 AYLQRTIQNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLLKLLPPNPGSA 855
Query: 181 --LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNS 238
++ FF Y + W + I P RN + M I T P +N
Sbjct: 856 ADILCTFFNHYGNFNWEKDAVYDPIFHEK-------PPRNYRPPREGMIIFTLHTPIINV 908
Query: 239 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF-------------TFFEA 285
+ + S ++R ++DE +R + +E + +W L + F ++
Sbjct: 909 ARSTSIPSMRKIVDEMKRAENLI-----SEGNANWAELLGIYPKTGKSALSSSADEFLKS 963
Query: 286 YKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 338
Y +Y++I++ + + + GWVESR L + R + +Q P F+
Sbjct: 964 YNSYIKINVQYWSLSLAKGSSLVGWVESRCLDLLDDLYRE-FPDIQARIWPARFT 1017
>gi|325090905|gb|EGC44215.1| DUF455 domain-containing protein [Ajellomyces capsulatus H88]
Length = 1256
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 149/355 (41%), Gaps = 41/355 (11%)
Query: 7 LVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPD 64
+V+ +G V +DID LCVG A FF + Q L + V + V
Sbjct: 681 IVVTTVGSSGLGVWTESSDIDCLCVGSISANV---FFELIIQRLRNRIDLGVKIIRRVKP 737
Query: 65 AHVPVMKFKFSGVSIDLLY----ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVT 120
A +++ + +G+ DL Y A W+ E ++ Q S L N L R
Sbjct: 738 AFGTMLELEVNGIKFDLQYCPAAAVAERWL--EVPNLPQSSPLFNLSLIPRMKLQPYRDQ 795
Query: 121 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 180
+ R + FR R ++ WAK RG+YS+ G+LGGI+ L+++R+ +L P S
Sbjct: 796 AYLQRTIQNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLLKLLPPNPGSA 855
Query: 181 --LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNS 238
++ FF Y + W + I P RN + M I T P +N
Sbjct: 856 ADILCTFFNHYGNFNWEKDAVYDPIFHEK-------PPRNYRPPREGMIIFTLHTPIINV 908
Query: 239 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF-------------TFFEA 285
+ + S ++R ++DE +R + +E + +W L + F ++
Sbjct: 909 ARSTSIPSMRKIVDEMKRAENLI-----SEGNANWAELLGIYPKTGKSALSSSADEFLKS 963
Query: 286 YKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 338
Y +Y++I++ + + + GWVESR L + R + +Q P F+
Sbjct: 964 YNSYIKINVQYWSLSLAKGSSLVGWVESRCLDLLDDLYRE-FPDIQARIWPARFT 1017
>gi|403334159|gb|EJY66233.1| Poly(A) polymerase PAPalpha [Oxytricha trifallax]
Length = 665
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 156/415 (37%), Gaps = 124/415 (29%)
Query: 13 GYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTEL--HPVPDAHVPVM 70
G+DK+S DID L + EDFF + L PEV + +P A +P++
Sbjct: 126 GFDKHS------DIDVLLSSFKFLLSREDFFSKFSAYLKS-PEVGAIIHQEIPQAQIPII 178
Query: 71 KFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT-------------VRSLNGC 117
KF+F D+LY + + P ISQ Q +Q V S G
Sbjct: 179 KFEFMSKQFDVLYCSM---LTP----ISQHQRCQLEKDQYFFEFSNVVQEKVDVFSFRGW 231
Query: 118 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL----- 172
+ + + F L+ ++ WAK++G+Y G+L GI+ +++ ++ ++
Sbjct: 232 SNCQYMYERIKDKEAFGWGLKIIKAWAKKKGLYGFNFGYLNGISLIIMLGKVDKMIRRER 291
Query: 173 ---------------------YPNAVPSM----------LVSRFFRVYTQWRWPNPVLLC 201
PN LV++FF VY++W P+
Sbjct: 292 FQSDYCDDTLSRNVNNQLSFTIPNRTLKSNNKIEDRVCELVTKFFEVYSKWDSKQPIFFQ 351
Query: 202 AIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC 261
S+ ++ + PI+TP P +++ ++TS+L +M++ Q +C
Sbjct: 352 DNNSWSMDQDLYSVCLK-----EVFPIVTPERPYKCTTHQINTSSLNHIMEQLQTAQNLC 406
Query: 262 EAMEKNEADVD---------------------------------WDTLFEPFTFFEAYKN 288
++K + +D W LF P+ FF +
Sbjct: 407 ILIQKRQLILDLVKYQNDNAFDKFGNPKKDNYNLSILKEFGQVTWKDLFNPYQFFTQHTI 466
Query: 289 YLRID------ISAENADDL---------------RNWKGWVESRLRQLTLKIER 322
+L+I+ IS N D++ +KG ESR + L L +E+
Sbjct: 467 FLQIEVMTDVNISQYNYDNVPDDPIGQYEVVLKHHHEYKGLFESRFKLLQLMMEQ 521
>gi|162448422|ref|YP_001610789.1| polynucleotide adenyltransferase [Sorangium cellulosum So ce56]
gi|161159004|emb|CAN90309.1| Polynucleotide adenyltransferase [Sorangium cellulosum So ce56]
Length = 961
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 131/346 (37%), Gaps = 42/346 (12%)
Query: 22 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 81
PGAD+D + P D Q+ + +PE + + V VP ++ G+ DL
Sbjct: 604 PGADLDLVAALPGPI----DLDAVEVQVRSALPEASTVRRVEAIRVPCLELCAVGLDADL 659
Query: 82 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV----------PKIQ 131
V PE + + E +L+ D +L V + +
Sbjct: 660 TLVDAGA-VRPEHAVARRLEL----GEAAAMALSAVTDADALLEAVDAASAPSAAPRRRE 714
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 191
F R ++ WA+ +G+ + G L GI W +L AR+ P+ P L+SRFF +
Sbjct: 715 AFLALGRAVKAWARAKGIDAAPFGGLPGIAWLVLAARVVCDAPDLEPGPLLSRFFGAWAA 774
Query: 192 WRWPNPVLL--CAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
W + P+ L A G+ G DP R I TP P + S V + L
Sbjct: 775 WDFRRPIALDPSAPAVGTPG----DPVR----------IATPTAPVRSCSDTVGAAALAT 820
Query: 250 MMDEFQRGHEICE-AMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+ DE E E A+ + L P + + I + A + + + GW
Sbjct: 821 LSDELYSAWEAVESALAAGRDPL--PDLLAPPPLHRRHAAWAVITVEAPEPEGVASGLGW 878
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQR 354
V R+R L ER L+ PH D P + +GL +
Sbjct: 879 VRGRIRALLSSFERAGVGDLRAWPHAFD----RGPRLARHAIGLGK 920
>gi|226295206|gb|EEH50626.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 1228
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 161/397 (40%), Gaps = 55/397 (13%)
Query: 7 LVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPD 64
++ +G V +D+D LCVGP +T FF Q L + + V L V
Sbjct: 680 FIVTAVGSYGLGVWTNSSDVDCLCVGPVSSTT---FFELAMQRLRKGADSGVKILRKVKA 736
Query: 65 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQ----DSILQNADEQTVRSLNGCRVT 120
A + + + +GV DL Y V L++S D + A V+ L R
Sbjct: 737 ATGTMWELEVNGVKFDLQYCPAGA-VAERWLEVSHLPRADPLFDLAYLSLVK-LQPYRDQ 794
Query: 121 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 180
+ R + FR R ++ WAK RG+YS+ G+LGGI+ L+++R+ +L P S+
Sbjct: 795 TYLQRTIKNPAMFRLLHRVIKAWAKSRGIYSSRFGYLGGIHITLMLSRLLKLLPPNTTSV 854
Query: 181 --LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNS 238
++ FF Y + W ++ + PR N + M I+T YP MN
Sbjct: 855 ADILRTFFNHYADFYWMEGMVY------DMNFHRKQPRYN-RSPRECMVILTLHYPIMNV 907
Query: 239 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAEN 298
+ S S++R ++DE R DTL + + Y + ++ +
Sbjct: 908 ARTASISSMRTIVDEMNRA----------------DTLISEGRYIKINVQYWGLSLAKGS 951
Query: 299 ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS-----DKSKP------LYCS 347
+ GW+ESR L I R + LQ P F+ +K+ P
Sbjct: 952 S-----LIGWLESRCLLLLADIHRKLPD-LQTRIWPARFTQNEDNNKNTPTQEEREYQGC 1005
Query: 348 YFMGLQR--KQGVPVGEGEQFDIRLTVKEFKQAVSMY 382
Y +GL + ++ P + D +L K ++ +
Sbjct: 1006 YLIGLAKADERADPANAASKPDRKLAWDTLKASLDQF 1042
>gi|353236816|emb|CCA68803.1| related to poly(A) polymerase [Piriformospora indica DSM 11827]
Length = 1198
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 137/332 (41%), Gaps = 30/332 (9%)
Query: 7 LVLIGLGYDKYSVHGPGADIDTLCVG---PRH---ATREEDFFGELHQMLTEMPEVTELH 60
L L +G VH +DID L VG P+ R Q T V
Sbjct: 610 LKLEAVGSYALGVHTCESDIDCLAVGNISPQTFWLLARSRLLAQAKQQTGTGTTVVKLRR 669
Query: 61 PVPDAHVPVMKFKFSGVSIDLLYARLSLWV-----IPEDLDISQDSILQNADEQTVRSLN 115
V DA V +M+ + G+ IDL Y V IPE I DS L ++ +L+
Sbjct: 670 FVKDAAVQMMELEAHGIKIDLQYCVAPKLVERWSEIPE---IPVDSPLFALPASSLVTLS 726
Query: 116 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 175
R + R++P + F R ++ + RRG+ G+LGG + LL+ R+ P+
Sbjct: 727 AYRDVLILRRVIPSLSAFVKAHRALKLFLSRRGLVGARFGYLGGFHLTLLLTRVAITLPH 786
Query: 176 AV---PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWD--PRRNPKDKYHLMPIIT 230
+ LV F R Y W W + ++G + +R P M +++
Sbjct: 787 SAGRSAPHLVEAFLREYAVWDWTQDTVHPIPAAAAVGTGAYKRVVQREP------MAVLS 840
Query: 231 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 290
+ P N + N S +++ + Q + ++ +D +F + Y++++
Sbjct: 841 ISKPQKNIASNASWNSVASLSHGLQTAN---ATLQSGGTWLDVCGTNPLKSFIDEYRSFV 897
Query: 291 RIDISAENADDL--RNWKGWVESRLRQLTLKI 320
+I++ D + R GW+ES++ L +++
Sbjct: 898 KIEVHYWGGDCMQGRALMGWLESKIVSLLVQL 929
>gi|62088188|dbj|BAD92541.1| poly(A) polymerase gamma variant [Homo sapiens]
Length = 382
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++EF++G + + + + ++D W L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 3 VMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 60
Query: 309 VESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGE 364
VES++R L +ER+ + + +P PG+ Y S +F+G+ ++ V E
Sbjct: 61 VESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESV 119
Query: 365 QFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPNFV 405
D+ ++ F +QA ++ L++ GM+I HV ++ L +++
Sbjct: 120 NIDLTYDIQSFTDTVYRQANNINMLKE-GMKIEATHVKKKQLHHYL 164
>gi|322692951|gb|EFY84832.1| Poly(A) polymerase type 3 [Metarhizium acridum CQMa 102]
Length = 274
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 140 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLY----PNAVPSMLVSRFFRVYTQWRWP 195
++ WAK RG+YS+ G LG +N ++++ IC+L P+A + +++ FF Y + W
Sbjct: 11 LKAWAKSRGLYSSKLGLLGSLNISVMLVPICKLLAYDGPSAGTTDILTTFFHHYRNFDWK 70
Query: 196 NPVLLCAIEEGSLGLQVWDPRRNPKDKYHL-----MPIITPAYPCMNSSYNVSTSTLRIM 250
++L DP + KYH M ++ P N++ N + ST+ I+
Sbjct: 71 TNMVL-------------DPLFHGTVKYHRTQRESMCLLGWHTPSRNTALNATASTIHIL 117
Query: 251 MDEFQRGHEICEAMEKNEADVDWDTLFE------PF---------TFFEAYKNYLRIDIS 295
E R ++ ++ V+WDT PF F +++K Y++++ S
Sbjct: 118 SAEIMRASDLL-----SQEGVNWDTFLRGTQSLLPFPELTACNAAGFLDSHKCYIKMNAS 172
Query: 296 AENADDLRN--WKGWVESRLRQLTLKIE 321
+ + GW+ESR + + ++
Sbjct: 173 YLGCSPRKGKRFVGWLESRCLMVLVDLQ 200
>gi|351712642|gb|EHB15561.1| Poly(A) polymerase gamma [Heterocephalus glaber]
Length = 528
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 34/39 (87%)
Query: 218 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 256
NP D+YHLMPIITPAYP NS+YNVSTST +M++EF++
Sbjct: 216 NPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQ 254
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + VH GADID LCV PRH R DFF + L + L V DA VP
Sbjct: 146 IFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGIRNLRAVEDAFVP 204
Query: 69 VMKFKFSGVSID 80
V+KF+F G+ ++
Sbjct: 205 VIKFEFDGIEVN 216
>gi|456389475|gb|EMF54915.1| hypothetical protein SBD_4583 [Streptomyces bottropensis ATCC
25435]
Length = 930
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 123/335 (36%), Gaps = 51/335 (15%)
Query: 22 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 81
PGAD+D + P A EL + E+ E ++ V A VP ++ + GV++DL
Sbjct: 605 PGADLDLVAALPGTA--------ELTSVQRELREAVDVREVVGARVPGLRLRLDGVNVDL 656
Query: 82 -LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCM 140
+ A SL P + + + + A + V + P F R +
Sbjct: 657 AVVATGSL--DPVEAVARRTELGEAAAVALSAVSDAEAVLASVGGHEPA---FAGLARQV 711
Query: 141 RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL 200
+ WA+ RG+ S G L G+ W++L AR + P L+ FF + W W PV
Sbjct: 712 KAWARARGLDSAPFGGLPGLAWSVLAARTVSEAGDLPPDGLLRHFFATWAAWDWREPVGG 771
Query: 201 CAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEI 260
G L L I+TP+ P + V+T ++ E R E+
Sbjct: 772 PGGTSGRLPLT----------------IVTPSAPVRPCTDQVTTGMRDLITQELFRAWEL 815
Query: 261 CEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS---AENADDLRNWKGWVESRLRQLT 317
E W L P + + + + A AD+ R V R+R L
Sbjct: 816 LEEGSS------WADLLTPPPLHRRHAAWAIVTVGGGPAGVADEGR-----VRGRMRALV 864
Query: 318 LKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGL 352
+ CH P F+ Y +GL
Sbjct: 865 TDLAEVAPG---CHAWPRPFTTAP----ARYAIGL 892
>gi|344249366|gb|EGW05470.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 63
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 226 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 285
MPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQK 58
Query: 286 YK 287
YK
Sbjct: 59 YK 60
>gi|297192707|ref|ZP_06910105.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
gi|297151463|gb|EFH31180.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 359
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 103/253 (40%), Gaps = 30/253 (11%)
Query: 12 LGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMK 71
+G + PGAD+D + P + G ++ +PE T + V A VP ++
Sbjct: 30 VGSRRMGCELPGADLDLVAALPG----SPELAGVRARLTAALPEATGVREVVGARVPGLR 85
Query: 72 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL-RLVPKI 130
G+++DL+ V P + + + ++A +L+ D +L ++ +
Sbjct: 86 MSVGGLAVDLVVVATGA-VDPAEAVGRRTELGEDA----AIALSAVSDADALLDQVADRR 140
Query: 131 QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS-MLVSRFFRVY 189
+ F R ++ WAK RG+ S G L G+ W++L AR + A+PS L+ FF +
Sbjct: 141 EAFTDLARRVKAWAKARGLDSAPFGGLPGLAWSVLAARTVR-EAGALPSDELLRHFFATW 199
Query: 190 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 249
W W PV P M ++TP P S V+ +
Sbjct: 200 AAWDWREPV------------------GGPARPDLPMTVMTPTAPVRPCSDQVTEGMRDL 241
Query: 250 MMDEFQRGHEICE 262
+ E R E+ +
Sbjct: 242 ITQELFRAWEVLD 254
>gi|76154117|gb|AAX25625.2| SJCHGC06256 protein [Schistosoma japonicum]
Length = 166
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVP 68
+ G + V+ GADID+L V PR TREE FF + +L E P V +LH V DA VP
Sbjct: 98 IFTFGSYRLGVNFRGADIDSLLVVPRFITREE-FFSDFQTVLAENPNVEDLHAVVDAFVP 156
Query: 69 VMKFKF 74
V+K KF
Sbjct: 157 VLKMKF 162
>gi|433605790|ref|YP_007038159.1| Polynucleotide adenyltransferase [Saccharothrix espanaensis DSM
44229]
gi|407883643|emb|CCH31286.1| Polynucleotide adenyltransferase [Saccharothrix espanaensis DSM
44229]
Length = 892
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 109/313 (34%), Gaps = 58/313 (18%)
Query: 22 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 81
P D+D + V D E ++ +P + L PV A P + G+ +DL
Sbjct: 586 PDGDLDLITV-----ASAADAVAE--RVRVALPAASALRPVVGARSPGWRLDVGGLGVDL 638
Query: 82 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 141
A + + + D + V + G RV FR R ++
Sbjct: 639 TVA----------VAGNPAAWSSLGDAEAVLAAVGDRV-----------DRFRRLAREVK 677
Query: 142 FWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLC 201
WA+ RG+ S G + G+ WA+L AR + ++ FF + W W +P+ L
Sbjct: 678 GWARARGLDSAPFGGVPGVGWAVLAARTVLDAGDGFDGGGLAEFFGTWAAWDWRDPIGLG 737
Query: 202 AIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC 261
A+ P+ + I+TPA P + + V ++ E R E+
Sbjct: 738 AV---------------PERTGAPVTIMTPAAPVRSCTEQVGPGFRDLLTAELYRAWEVV 782
Query: 262 EAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 321
EA + L P + + + + + +R RLR L +E
Sbjct: 783 EAGGTD--------LATPPDLHRVHAAWAVVTVPHDRVGPVRG-------RLRALLTALE 827
Query: 322 RHTYNMLQCHPHP 334
P P
Sbjct: 828 TAGVADADAWPRP 840
>gi|302532764|ref|ZP_07285106.1| polynucleotide adenyltransferase [Streptomyces sp. C]
gi|302441659|gb|EFL13475.1| polynucleotide adenyltransferase [Streptomyces sp. C]
Length = 430
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 101/249 (40%), Gaps = 29/249 (11%)
Query: 22 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 81
PGAD+D + V P A D G ++ +P L V A VP ++ G+ +DL
Sbjct: 91 PGADLDLVAVLPGPA----DAAGVRARVAAALPGARRLREVTGARVPGLRLHAYGLDVDL 146
Query: 82 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 141
+ + + L +++ + L A + +L+ + + F + R +
Sbjct: 147 VL--VGAGALDPGLAVARRAELGEAAAVALSALDDADAVRESVGA--SHAAFASLAREAK 202
Query: 142 FWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV-------PSMLVSRFFRVYTQWRW 194
WA+ RG+ S G L G+ WA+L AR + AV P+ L FF + W W
Sbjct: 203 AWARARGLDSAPFGGLPGLAWAVLAARTVR---EAVRDAADLSPAGLRREFFGTWAAWDW 259
Query: 195 PNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEF 254
PV L + R+P + ++TP P + + V +++ E
Sbjct: 260 SEPVSLLPADGAG---------RSPSPDP--VTVLTPRAPVRSCTAQVGPGMRDLLVREL 308
Query: 255 QRGHEICEA 263
R E+ EA
Sbjct: 309 YRAWEVLEA 317
>gi|290958156|ref|YP_003489338.1| hypothetical protein SCAB_36991 [Streptomyces scabiei 87.22]
gi|260647682|emb|CBG70787.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 925
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 130/333 (39%), Gaps = 48/333 (14%)
Query: 22 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 81
PGAD+D + P EL + E+ +E+ V A VP ++ +F G+ +DL
Sbjct: 601 PGADLDLVAALPGTV--------ELGSLRRELGGASEVREVVGARVPGLRLRFDGLDVDL 652
Query: 82 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP---KIQNFRTTLR 138
V+ +++ + A+ +L V+D L + F R
Sbjct: 653 A-------VVATGAMDPGEAVDRRAELGEAAALALSAVSDAEAVLASVGGRGPAFAGLAR 705
Query: 139 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 198
++ WA+ RG+ S G L G+ W++L AR + PS L+ FF + W W PV
Sbjct: 706 QVKAWARARGLDSAPFGGLPGLAWSVLAARTAGEAGDLPPSCLLRHFFATWAAWDWREPV 765
Query: 199 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 258
+E G + + TP+ P + + V T+ +R ++ +
Sbjct: 766 --GGLEGAPAG---------------PLTVATPSAPVRSCTDQV-TADMRDLITQ----- 802
Query: 259 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 318
E+ A E E W + P + + + A D + + +G V R+R L
Sbjct: 803 ELFRAWELLEEGASWTEVLAPPPLHRRHAAWAVVTAGA-GTDGVVD-EGRVRGRMRALIT 860
Query: 319 KIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMG 351
+ CH P F+ + P+ + +G
Sbjct: 861 DLAGLAPG---CHAWPRPFA--TAPVRYAIGLG 888
>gi|254385996|ref|ZP_05001313.1| hypothetical protein SSAG_05655 [Streptomyces sp. Mg1]
gi|194344858|gb|EDX25824.1| hypothetical protein SSAG_05655 [Streptomyces sp. Mg1]
Length = 649
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 55/344 (15%)
Query: 22 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 81
PGAD+D + P E ++ +PE L V A VP ++F+ +G+ +DL
Sbjct: 310 PGADLDLVAALPGAVGGAE----VRERIAAALPEAERLREVRGARVPGLRFRVAGLDVDL 365
Query: 82 LYARLSLWVIPEDLDISQDSILQNAD--EQTVRSLNGCRVTDQILRLV-PKIQNFRTTLR 138
+ V LD + ++ + A+ E +L+ D + V + F R
Sbjct: 366 VV------VATGGLDPA-GALARRAELGEAAAVALSAVSDADAVRESVGAEHAAFARLAR 418
Query: 139 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQ----LYPNAVP------SMLVSRFFRV 188
++ WA+ RG+ S G L GI WA+L AR + L P+ + L+ FF
Sbjct: 419 EVKAWARARGLDSAPFGGLPGIAWAVLAARTVREAAALSPDGLSPDGLSLDGLLREFFGA 478
Query: 189 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 248
+ W W +PV L P P + + ++TP+ P + + V LR
Sbjct: 479 WAAWDWCDPVALH------------HPPPAPGSEGAVT-VLTPSEPVRSCTAQVGPG-LR 524
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
++ G E+ EA E +A P + + + + + G
Sbjct: 525 DLL-----GRELYEAWESPQAG--------PPAPHRRHAAWAVVTVRGATPQEFEESLGR 571
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGL 352
RLR L +E P P + D Y +GL
Sbjct: 572 TRGRLRALLGALEEGGVAEAHAWPRPFERGDT----VARYAIGL 611
>gi|429200719|ref|ZP_19192393.1| Tat pathway signal sequence domain protein [Streptomyces ipomoeae
91-03]
gi|428663602|gb|EKX62951.1| Tat pathway signal sequence domain protein [Streptomyces ipomoeae
91-03]
Length = 985
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 116/322 (36%), Gaps = 43/322 (13%)
Query: 22 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 81
PGAD+D + P + ++ +PE ++ V A VP ++ + + +DL
Sbjct: 654 PGADLDLVAALPGTV----ELAAVQAELSKALPEAADVREVVGARVPGLRLRLDRLDVDL 709
Query: 82 LYARLSLWVIPEDLDISQ--DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 139
+ V +D ++ D ++ + V + F R
Sbjct: 710 VV------VATGSMDPAEAVDRRVELGEAAAVALSAVSDADAVLASAGAHGPAFARLARQ 763
Query: 140 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVL 199
++ WA+ RG+ S G L G+ W++L AR + P L+ FF + W W PV
Sbjct: 764 VKAWARARGLDSAPFGGLPGLAWSVLAARTAGEAGDLPPYDLLRHFFATWAAWDWRTPV- 822
Query: 200 LCAIEEGSLGLQVWDPRRNPKDKYHLMP--IITPAYPCMNSSYNVSTSTLRIMMDEFQRG 257
P + H +P I TP+ P + V+ ++ E R
Sbjct: 823 ------------------GPAGQSHALPLTITTPSAPIRPCTDQVTAGMRDLVTQELFRA 864
Query: 258 HEICEAMEKN-EADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL 316
E+ E + A W L P + + + + AD+ R + R R L
Sbjct: 865 WEVLEGAPTDPTARYPWAELLAPPPLHRRHAAWAVV-TAGPGADEGR-----LRGRTRSL 918
Query: 317 TLKIERHTYNMLQCHPHPGDFS 338
+ T + CH P F+
Sbjct: 919 ITDLAETTPD---CHAWPRPFT 937
>gi|297726257|ref|NP_001175492.1| Os08g0278750 [Oryza sativa Japonica Group]
gi|255678316|dbj|BAH94220.1| Os08g0278750, partial [Oryza sativa Japonica Group]
Length = 103
Score = 58.9 bits (141), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 33/40 (82%), Gaps = 2/40 (5%)
Query: 174 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQ 211
P +PSML+ RFFRV+ +W+WP+PV+LCAIE +G LGL+
Sbjct: 34 PQRLPSMLLPRFFRVFARWKWPSPVMLCAIEHDDGELGLK 73
>gi|349804279|gb|AEQ17612.1| putative poly polymerase alpha [Hymenochirus curtipes]
Length = 153
Score = 56.6 bits (135), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 46 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDI 97
++ L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+
Sbjct: 2 FYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDL 53
>gi|224141617|ref|XP_002324163.1| predicted protein [Populus trichocarpa]
gi|222865597|gb|EEF02728.1| predicted protein [Populus trichocarpa]
Length = 95
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 319 KIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGV 358
+IER T MLQCHP+P ++ D SK +C++FMGLQRK+GV
Sbjct: 5 QIERDTNGMLQCHPYPNEYIDASKQCPHCAFFMGLQRKEGV 45
>gi|294939632|ref|XP_002782536.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239894204|gb|EER14331.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 157
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 270 DVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ 329
+V W L PF FF+ Y+ +L ++ISAE +KG VESR+R L +E + +
Sbjct: 17 EVTWADLCAPFPFFQVYRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLETCCGHKVL 76
Query: 330 CHPHPGDF 337
PHP F
Sbjct: 77 PQPHPVMF 84
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 31/48 (64%)
Query: 94 DLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 141
DLDI+Q S +EQTV SLNGCRVTDQ L LVP I + + +R
Sbjct: 679 DLDIAQGSDTTECNEQTVDSLNGCRVTDQFLHLVPNISSLGYIMNGVR 726
>gi|116196384|ref|XP_001224004.1| hypothetical protein CHGG_04790 [Chaetomium globosum CBS 148.51]
gi|88180703|gb|EAQ88171.1| hypothetical protein CHGG_04790 [Chaetomium globosum CBS 148.51]
Length = 891
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 81/193 (41%), Gaps = 26/193 (13%)
Query: 118 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ------ 171
R TD + R +P FR R ++ WAK RG+Y+ GFL GI ++L+AR+ +
Sbjct: 637 RDTDYLARSLPDPPTFRLAHRAIKTWAKSRGIYAARFGFLSGIQISILLARVHKLLTRTT 696
Query: 172 -----LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 226
P L++ FF Y + W + + + R P++ ++
Sbjct: 697 TTTPTRTTPPTPETLLTTFFTHYATFDWAHQLAF----DPFFHRHALPYTRTPREPLAVL 752
Query: 227 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT----- 281
PA N++ S + + + EF+R ++ + + W +
Sbjct: 753 GYFAPA---RNTALAASVPSTKTLAAEFRRAADV---LRGENGALGWAGFLGGGSGAKDD 806
Query: 282 FFEAYKNYLRIDI 294
F A+++Y+++D+
Sbjct: 807 FLAAHRSYVKLDV 819
>gi|62733224|gb|AAX95341.1| hypothetical protein [Oryza sativa Japonica Group]
gi|77552690|gb|ABA95487.1| expressed protein [Oryza sativa Japonica Group]
Length = 347
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 25/32 (78%)
Query: 110 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 141
TVRSLNG RV D+ILRLVP F TTLRC++
Sbjct: 158 TVRSLNGVRVADEILRLVPDAATFHTTLRCVK 189
>gi|297725915|ref|NP_001175321.1| Os07g0658500 [Oryza sativa Japonica Group]
gi|255678036|dbj|BAH94049.1| Os07g0658500 [Oryza sativa Japonica Group]
Length = 319
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 25/32 (78%)
Query: 110 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 141
TVR+LNG RV D+ILRLVP F TTLRC++
Sbjct: 135 TVRNLNGVRVADEILRLVPDAAAFHTTLRCVK 166
>gi|344256545|gb|EGW12649.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 349
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+M++E ++G I + + ++A+ W LFE FF+ YK+Y+ + SA
Sbjct: 2 VMVEELKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAHTEKQRLECVDL 59
Query: 309 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 363
VES++ L +E++ + L Q P P D DK + + +GL K+ E
Sbjct: 60 VESKICILVGSLEKNEFIKLAHVNPQSFPAPKDNPDKEE-FRTMWVIGLVFKK-TENSEN 117
Query: 364 EQFDIRLTVKEFKQAV-------SMYTLRKPGMQISVAHVTRRNL 401
D+ ++ F V M+ L M+I+ HV R+ L
Sbjct: 118 LSVDLTYDIQSFTDTVYSQAINSKMFEL---DMKIAAMHVKRKQL 159
>gi|46805211|dbj|BAD17691.1| unknown protein [Oryza sativa Japonica Group]
Length = 285
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 25/32 (78%)
Query: 110 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 141
TVRSLNG RV D+ILRLVP F TTLRC++
Sbjct: 32 TVRSLNGVRVADEILRLVPDAAAFHTTLRCVK 63
>gi|47496915|dbj|BAD19964.1| hypothetical protein [Oryza sativa Japonica Group]
gi|47497725|dbj|BAD19790.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 266
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 25/35 (71%)
Query: 107 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 141
D T RSLNG RV D+ILRLVP F TTLRC++
Sbjct: 59 DLATARSLNGVRVADEILRLVPDADVFHTTLRCVK 93
>gi|171688608|ref|XP_001909244.1| hypothetical protein [Podospora anserina S mat+]
gi|170944266|emb|CAP70376.1| unnamed protein product [Podospora anserina S mat+]
Length = 565
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 11/151 (7%)
Query: 7 LVLIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPD 64
+V++ +G V +DID C+GP + F L + V L V
Sbjct: 404 VVVVPVGSYALGVWTTSSDIDVCCIGPFSSNT---LFSVASSSLRKAATQGVRNLRRVKA 460
Query: 65 AHVPVMKFKFSGVSIDLLYARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRVT 120
+++ + GV +DL Y + W P L + + + QT+ L R
Sbjct: 461 NTGTMLELEVQGVRMDLQYCPAASVAQQW--PNVLRLPAKDPVWSLAPQTLNKLKAIRDI 518
Query: 121 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYS 151
D + R +P I++FR R ++ WA+ RGVYS
Sbjct: 519 DYLRRSLPDIESFRLAHRFIKTWARSRGVYS 549
>gi|46806537|dbj|BAD17650.1| unknown protein [Oryza sativa Japonica Group]
gi|125581350|gb|EAZ22281.1| hypothetical protein OsJ_05937 [Oryza sativa Japonica Group]
Length = 169
Score = 48.1 bits (113), Expect = 0.016, Method: Composition-based stats.
Identities = 22/32 (68%), Positives = 25/32 (78%)
Query: 110 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 141
TVRSLNG RV D+ILRLVP F TTLRC++
Sbjct: 42 TVRSLNGVRVADKILRLVPDAAAFHTTLRCVK 73
>gi|218186213|gb|EEC68640.1| hypothetical protein OsI_37050 [Oryza sativa Indica Group]
Length = 248
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 24/32 (75%)
Query: 110 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 141
TVRSLNG RV D+IL LVP F TTLRC++
Sbjct: 111 TVRSLNGVRVADEILWLVPDAAAFHTTLRCVK 142
>gi|344252871|gb|EGW08975.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 384
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 30/171 (17%)
Query: 249 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 308
+ ++EF++G I + + ++A W FE FF+ K+Y+ + SA W G
Sbjct: 2 VAVEEFKQGLAITDEILLSKAK--WSKFFEAPNFFQKCKHYIVLLASAPTEKQRLEWVGL 59
Query: 309 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 368
VES++R L +E++ + L H +P + +GL K+ E ++
Sbjct: 60 VESKIRILVGSLEKNEFITL-AHVNPE--------FRTIWVIGLVFKK---TENSENLNV 107
Query: 369 RLT--VKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN----LPNFVF 406
LT ++ F +QA++ M+ L M+ + HV R+ LP++V
Sbjct: 108 DLTYDIQSFMDTVYRQAINSKMFEL---DMKTAAMHVKRKQLHQLLPSYVL 155
>gi|341888961|gb|EGT44896.1| hypothetical protein CAEBREN_24044 [Caenorhabditis brenneri]
Length = 224
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 33/142 (23%)
Query: 10 IGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 69
+ G+ VH G DID++ + P ++ +L+ +A V +
Sbjct: 55 VAFGFYWLGVHSSGGDIDSVLIAPSS-------------------KIKKLNAAGNAFVLL 95
Query: 70 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDS------------ILQNADEQTVRSLNGC 117
M + GV +DLL A + L IP +LD++ DS +L+ + G
Sbjct: 96 MTMECDGVEVDLLIACMDLATIPANLDLTSDSPSDQESLLMYPKVLKFTSKTQSVLFIGL 155
Query: 118 RVTD--QILRLVPKIQNFRTTL 137
TD + L L +I+NF+ T+
Sbjct: 156 EFTDVNKNLDLTTEIENFKKTV 177
>gi|218190338|gb|EEC72765.1| hypothetical protein OsI_06415 [Oryza sativa Indica Group]
Length = 608
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 23/32 (71%)
Query: 110 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 141
TVRSLNG V D+ILRLVP TTLRC++
Sbjct: 151 TVRSLNGVHVADEILRLVPDAAALHTTLRCVK 182
>gi|449673865|ref|XP_004208051.1| PREDICTED: poly(A) polymerase alpha-like, partial [Hydra
magnipapillata]
Length = 144
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTEL 59
+ G + VH GADIDTL V PRH R DFFG ++ L E +L
Sbjct: 94 IFTFGSFRLGVHTKGADIDTLLVAPRHIER-ADFFGSFYEFLKNREETKDL 143
>gi|428181303|gb|EKX50167.1| hypothetical protein GUITHDRAFT_103980 [Guillardia theta CCMP2712]
Length = 760
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 22 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 81
P +I G R R F L ++LT + + P+P+A VP++KF+
Sbjct: 452 PEEEIQRNAKGQRKTARFRYFLIGLAKLLTRQ-GMMNVEPLPNARVPIIKFQ-------- 502
Query: 82 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 141
AR + LD S D L V ++ C T+ + R + C++
Sbjct: 503 --AR-------DGLDFSFDCDL------CVNNVLACINTNLLFTYTMLDARVRPLIMCIK 547
Query: 142 FWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 180
W K+R +++ G+L ++L+V + Q Y +P +
Sbjct: 548 HWVKQRQIHNAFRGYLSSYTYSLMVIQYLQ-YERILPCL 585
>gi|385300970|gb|EIF45209.1| poly polymerase [Dekkera bruxellensis AWRI1499]
Length = 122
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 9 LIGLGYDKYSVHGPGADIDTLCVGPRHATREEDFF 43
L G + V+GPG+DIDTL V P+H T+ EDFF
Sbjct: 86 LFTFGSYRLGVYGPGSDIDTLVVVPKHVTK-EDFF 119
>gi|356530683|ref|XP_003533910.1| PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max]
Length = 134
Score = 42.0 bits (97), Expect = 0.96, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query: 132 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 165
+F TTL C++FWAK RG+YSNV FL + W L
Sbjct: 103 HFLTTLCCLKFWAKGRGIYSNV--FLVVLTWHFL 134
>gi|358342231|dbj|GAA49742.1| poly(A) polymerase [Clonorchis sinensis]
Length = 373
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 273 WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY---NMLQ 329
W LFEP FF Y++Y+ + ++ G VESRLR L E + Y +
Sbjct: 46 WSNLFEPAFFFR-YRHYVVVIVTGSAKRSFLELCGLVESRLRVLVSNFELNRYVKIAHVN 104
Query: 330 CHPHPGDFSDKSKPLYCSYFMGLQ 353
C + SD+ L +F+G++
Sbjct: 105 CRSYGKGPSDEDAELVRKWFIGME 128
>gi|125581305|gb|EAZ22236.1| hypothetical protein OsJ_05891 [Oryza sativa Japonica Group]
Length = 126
Score = 41.2 bits (95), Expect = 1.7, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 110 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 159
TVRSLNG RV D+ILRLVP F TT A R G+ + GF G
Sbjct: 32 TVRSLNGVRVADEILRLVPDAAAFHTTA------AVREGIDKLLRGFDGA 75
>gi|226500652|ref|NP_001146769.1| uncharacterized protein LOC100280371 [Zea mays]
gi|219888671|gb|ACL54710.1| unknown [Zea mays]
Length = 214
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 381 MYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 416
MY+L KPGM ++V HV R +P++VF G + P+
Sbjct: 1 MYSLWKPGMDLAVTHVHREQVPSYVFEQGYKKPCPT 36
>gi|428182086|gb|EKX50948.1| hypothetical protein GUITHDRAFT_66394 [Guillardia theta CCMP2712]
Length = 242
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 24/122 (19%)
Query: 59 LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCR 118
+ +P A VP++KFK + +D ++ D D+S +++L C
Sbjct: 4 VEALPYARVPIIKFK-AQDGLDFVF----------DCDLSVNNVL------------ACI 40
Query: 119 VTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVP 178
TD + + R + C++ W K+R ++ G+L + L+V + Q Y +P
Sbjct: 41 NTDLLFTYTMLDKRVRPLIMCIKHWVKQRRIHKTFRGYLSSYTYTLMVIQYLQ-YERVLP 99
Query: 179 SM 180
+
Sbjct: 100 CL 101
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,678,151,887
Number of Sequences: 23463169
Number of extensions: 461236776
Number of successful extensions: 1073677
Number of sequences better than 100.0: 887
Number of HSP's better than 100.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 1070493
Number of HSP's gapped (non-prelim): 1191
length of query: 655
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 506
effective length of database: 8,863,183,186
effective search space: 4484770692116
effective search space used: 4484770692116
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)