Query 006236
Match_columns 655
No_of_seqs 470 out of 2476
Neff 6.2
Searched_HMMs 46136
Date Thu Mar 28 20:21:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006236.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006236hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1595 CCCH-type Zn-finger pr 100.0 2.5E-82 5.5E-87 683.3 20.5 501 15-625 10-524 (528)
2 KOG4412 26S proteasome regulat 99.9 2.1E-22 4.6E-27 192.7 8.3 143 15-180 37-179 (226)
3 KOG4412 26S proteasome regulat 99.9 9.2E-22 2E-26 188.3 9.6 140 13-177 69-208 (226)
4 PHA02859 ankyrin repeat protei 99.8 1.1E-19 2.3E-24 182.7 14.3 146 11-178 16-163 (209)
5 KOG0509 Ankyrin repeat and DHH 99.8 5.5E-20 1.2E-24 203.6 10.5 144 17-183 45-188 (600)
6 KOG0509 Ankyrin repeat and DHH 99.8 7.4E-20 1.6E-24 202.6 11.2 148 14-185 76-224 (600)
7 PHA02743 Viral ankyrin protein 99.8 5.3E-19 1.1E-23 171.3 13.6 137 14-174 18-162 (166)
8 PHA02859 ankyrin repeat protei 99.8 6.7E-19 1.5E-23 176.9 14.0 146 13-181 48-200 (209)
9 PHA02791 ankyrin-like protein; 99.8 9.3E-19 2E-23 183.9 14.4 149 14-176 28-196 (284)
10 PHA02791 ankyrin-like protein; 99.8 1.6E-18 3.4E-23 182.2 15.2 105 60-177 124-230 (284)
11 PHA02878 ankyrin repeat protei 99.8 1.1E-18 2.4E-23 195.3 14.4 140 16-182 168-309 (477)
12 PHA02878 ankyrin repeat protei 99.8 1.1E-18 2.5E-23 195.2 14.1 142 15-181 36-242 (477)
13 PHA02875 ankyrin repeat protei 99.8 2.9E-18 6.2E-23 187.9 15.4 149 14-174 33-202 (413)
14 PHA02874 ankyrin repeat protei 99.8 3.5E-18 7.5E-23 189.0 14.6 145 14-182 122-297 (434)
15 PHA02875 ankyrin repeat protei 99.8 4.6E-18 1E-22 186.3 14.3 139 17-180 3-142 (413)
16 PHA02946 ankyin-like protein; 99.8 6.5E-18 1.4E-22 188.1 14.1 140 17-179 38-179 (446)
17 PHA02741 hypothetical protein; 99.7 8.2E-18 1.8E-22 163.2 12.7 130 14-167 19-159 (169)
18 PHA02874 ankyrin repeat protei 99.7 9.8E-18 2.1E-22 185.4 14.8 145 14-182 33-199 (434)
19 PHA02716 CPXV016; CPX019; EVM0 99.7 1E-17 2.2E-22 194.8 14.3 147 14-178 210-404 (764)
20 KOG0510 Ankyrin repeat protein 99.7 6.2E-18 1.3E-22 190.5 12.0 145 11-179 268-416 (929)
21 PHA02876 ankyrin repeat protei 99.7 1.1E-17 2.4E-22 195.2 14.7 159 14-181 305-484 (682)
22 KOG0508 Ankyrin repeat protein 99.7 3.1E-18 6.8E-23 183.2 8.7 154 14-193 82-236 (615)
23 PLN03192 Voltage-dependent pot 99.7 2E-17 4.4E-22 196.9 15.1 140 16-177 525-693 (823)
24 PHA02716 CPXV016; CPX019; EVM0 99.7 1.6E-17 3.6E-22 193.0 13.8 143 14-179 175-358 (764)
25 PHA02736 Viral ankyrin protein 99.7 9.3E-18 2E-22 159.7 9.4 135 14-168 15-154 (154)
26 PHA03100 ankyrin repeat protei 99.7 2.4E-17 5.1E-22 183.7 13.0 133 16-173 68-209 (480)
27 PHA03095 ankyrin-like protein; 99.7 4.2E-17 9.1E-22 181.1 15.0 108 61-177 45-156 (471)
28 PHA02798 ankyrin-like protein; 99.7 2.9E-17 6.4E-22 184.6 13.9 116 60-182 142-300 (489)
29 KOG0512 Fetal globin-inducing 99.7 2.7E-17 5.9E-22 156.8 9.8 144 15-181 62-206 (228)
30 PHA02989 ankyrin repeat protei 99.7 6.3E-17 1.4E-21 182.1 14.1 147 14-180 33-188 (494)
31 PHA03100 ankyrin repeat protei 99.7 4.8E-17 1E-21 181.2 12.3 145 14-183 33-186 (480)
32 PHA02884 ankyrin repeat protei 99.7 9.5E-17 2.1E-21 169.5 13.6 128 14-160 30-157 (300)
33 PHA02946 ankyin-like protein; 99.7 9.5E-17 2.1E-21 178.8 14.1 143 17-182 73-217 (446)
34 PHA02989 ankyrin repeat protei 99.7 8.1E-17 1.8E-21 181.2 13.4 148 15-183 107-299 (494)
35 PHA03095 ankyrin-like protein; 99.7 9.6E-17 2.1E-21 178.2 13.8 146 14-181 45-195 (471)
36 PHA02876 ankyrin repeat protei 99.7 1E-16 2.3E-21 187.0 14.4 145 14-181 271-416 (682)
37 PHA02795 ankyrin-like protein; 99.7 8.5E-17 1.8E-21 176.6 12.7 145 14-184 114-265 (437)
38 PHA02798 ankyrin-like protein; 99.7 1.2E-16 2.7E-21 179.5 13.1 145 14-179 34-188 (489)
39 KOG0502 Integral membrane anky 99.7 5.9E-17 1.3E-21 159.5 7.7 155 15-181 95-267 (296)
40 KOG0508 Ankyrin repeat protein 99.7 1.2E-16 2.6E-21 171.2 10.0 152 14-181 40-191 (615)
41 KOG0514 Ankyrin repeat protein 99.7 8.2E-17 1.8E-21 168.1 7.8 145 12-180 264-414 (452)
42 PHA02917 ankyrin-like protein; 99.7 3.8E-16 8.2E-21 181.3 13.5 154 13-185 29-241 (661)
43 KOG0510 Ankyrin repeat protein 99.6 3.7E-16 7.9E-21 176.4 10.3 158 14-185 223-389 (929)
44 PHA02795 ankyrin-like protein; 99.6 1.1E-15 2.4E-20 167.8 13.7 143 15-170 148-292 (437)
45 PF12796 Ank_2: Ankyrin repeat 99.6 1.2E-15 2.6E-20 131.5 10.3 89 67-170 1-89 (89)
46 KOG0502 Integral membrane anky 99.6 2.7E-16 5.8E-21 154.9 6.5 140 11-176 155-294 (296)
47 PHA02741 hypothetical protein; 99.6 8.2E-16 1.8E-20 149.2 9.7 115 60-182 18-141 (169)
48 KOG0195 Integrin-linked kinase 99.6 5.7E-16 1.2E-20 157.5 6.5 137 20-180 4-140 (448)
49 PHA02743 Viral ankyrin protein 99.6 2.6E-15 5.7E-20 145.5 9.2 116 60-183 17-138 (166)
50 KOG0505 Myosin phosphatase, re 99.6 4.2E-15 9E-20 162.2 10.4 145 14-182 71-273 (527)
51 KOG4177 Ankyrin [Cell wall/mem 99.6 3.4E-15 7.4E-20 177.3 10.5 140 14-165 472-631 (1143)
52 KOG4177 Ankyrin [Cell wall/mem 99.6 4E-15 8.7E-20 176.7 10.1 155 15-182 439-615 (1143)
53 PHA02730 ankyrin-like protein; 99.6 1.3E-14 2.8E-19 166.3 13.0 140 19-180 346-503 (672)
54 PHA02917 ankyrin-like protein; 99.6 1.2E-14 2.5E-19 169.0 12.8 108 36-167 122-257 (661)
55 PHA02884 ankyrin repeat protei 99.6 1.5E-14 3.2E-19 152.9 11.0 114 59-182 28-146 (300)
56 PF12796 Ank_2: Ankyrin repeat 99.5 4.2E-14 9.2E-19 121.8 11.0 89 20-131 1-89 (89)
57 KOG0195 Integrin-linked kinase 99.5 2.2E-14 4.7E-19 146.1 9.9 129 14-167 32-160 (448)
58 TIGR00870 trp transient-recept 99.5 1.9E-14 4.1E-19 169.8 10.7 159 14-182 50-266 (743)
59 PHA02730 ankyrin-like protein; 99.5 4.5E-14 9.7E-19 162.0 12.7 133 14-168 376-526 (672)
60 PHA02736 Viral ankyrin protein 99.5 1.4E-14 3.1E-19 137.8 6.3 115 59-182 13-135 (154)
61 cd00204 ANK ankyrin repeats; 99.5 5.1E-13 1.1E-17 118.6 13.6 122 14-160 5-126 (126)
62 KOG4214 Myotrophin and similar 99.5 1.1E-13 2.4E-18 119.9 8.8 103 19-141 5-107 (117)
63 TIGR00870 trp transient-recept 99.5 8.7E-14 1.9E-18 164.2 9.5 147 14-183 15-218 (743)
64 KOG0507 CASK-interacting adapt 99.5 6.7E-14 1.5E-18 157.3 7.2 144 14-176 47-225 (854)
65 KOG0514 Ankyrin repeat protein 99.5 2.1E-13 4.5E-18 142.9 9.9 124 14-162 300-429 (452)
66 COG0666 Arp FOG: Ankyrin repea 99.4 1.6E-12 3.5E-17 126.5 13.7 123 16-163 73-203 (235)
67 PHA02792 ankyrin-like protein; 99.4 1.3E-12 2.7E-17 148.9 13.3 137 20-180 310-450 (631)
68 KOG0505 Myosin phosphatase, re 99.4 5E-13 1.1E-17 146.1 9.7 141 16-181 40-239 (527)
69 PLN03192 Voltage-dependent pot 99.4 9.2E-13 2E-17 157.3 12.6 119 60-183 522-665 (823)
70 KOG0507 CASK-interacting adapt 99.4 3.5E-13 7.7E-18 151.6 8.4 155 17-183 4-158 (854)
71 PHA02792 ankyrin-like protein; 99.4 1.4E-12 3.1E-17 148.4 13.1 134 16-168 339-481 (631)
72 cd00204 ANK ankyrin repeats; 99.4 2.7E-12 5.8E-17 113.9 11.1 108 60-178 4-111 (126)
73 KOG0512 Fetal globin-inducing 99.4 1.6E-12 3.6E-17 124.4 8.6 109 64-182 64-172 (228)
74 KOG3676 Ca2+-permeable cation 99.4 1.2E-12 2.7E-17 148.9 8.6 151 15-184 142-319 (782)
75 KOG4214 Myotrophin and similar 99.3 1.9E-12 4.2E-17 112.3 6.6 101 65-177 4-104 (117)
76 KOG3676 Ca2+-permeable cation 99.3 6.1E-12 1.3E-16 143.4 10.9 138 14-163 182-331 (782)
77 KOG0515 p53-interacting protei 99.3 5.2E-12 1.1E-16 137.1 9.5 122 17-161 551-673 (752)
78 PTZ00322 6-phosphofructo-2-kin 99.3 1.5E-11 3.2E-16 143.7 11.3 102 65-177 84-192 (664)
79 KOG1710 MYND Zn-finger and ank 99.3 1.6E-11 3.4E-16 125.5 9.9 124 14-161 10-133 (396)
80 PTZ00322 6-phosphofructo-2-kin 99.3 2.9E-11 6.2E-16 141.2 12.7 107 18-143 84-197 (664)
81 PF13637 Ank_4: Ankyrin repeat 99.2 4.7E-11 1E-15 94.1 6.7 54 63-121 1-54 (54)
82 PF13857 Ank_5: Ankyrin repeat 99.2 1.4E-11 3.1E-16 98.2 3.6 56 82-141 1-56 (56)
83 COG0666 Arp FOG: Ankyrin repea 99.2 1.7E-10 3.6E-15 112.4 11.1 115 60-182 70-189 (235)
84 KOG0515 p53-interacting protei 99.1 6.5E-11 1.4E-15 128.7 7.9 91 67-168 554-644 (752)
85 PF13857 Ank_5: Ankyrin repeat 99.1 9.7E-11 2.1E-15 93.4 4.6 53 38-105 3-56 (56)
86 PF13637 Ank_4: Ankyrin repeat 99.1 1.8E-10 3.9E-15 90.8 5.2 54 98-160 1-54 (54)
87 KOG4369 RTK signaling protein 99.0 1.6E-10 3.4E-15 133.6 5.1 130 17-169 757-886 (2131)
88 KOG1595 CCCH-type Zn-finger pr 98.9 2.5E-09 5.4E-14 117.7 9.9 190 96-308 56-261 (528)
89 KOG4369 RTK signaling protein 98.8 9.1E-09 2E-13 119.4 6.5 130 17-168 858-987 (2131)
90 KOG1710 MYND Zn-finger and ank 98.7 5.1E-08 1.1E-12 100.2 9.2 90 13-120 42-131 (396)
91 KOG0506 Glutaminase (contains 98.7 1.9E-08 4.2E-13 108.7 5.3 93 14-124 504-596 (622)
92 KOG0783 Uncharacterized conser 98.6 3.2E-08 7E-13 112.6 3.3 80 60-143 49-128 (1267)
93 KOG0506 Glutaminase (contains 98.5 9.2E-08 2E-12 103.6 5.3 97 60-167 503-600 (622)
94 KOG0818 GTPase-activating prot 98.5 2.8E-07 6.1E-12 100.3 8.1 97 60-166 124-226 (669)
95 KOG1677 CCCH-type Zn-finger pr 98.5 8.8E-08 1.9E-12 102.9 4.0 68 247-314 128-209 (332)
96 KOG0782 Predicted diacylglycer 98.5 4E-07 8.6E-12 100.2 8.7 121 18-162 868-989 (1004)
97 KOG0818 GTPase-activating prot 98.3 1.5E-06 3.2E-11 94.9 9.2 88 18-123 135-222 (669)
98 PF13606 Ank_3: Ankyrin repeat 98.3 8.8E-07 1.9E-11 61.9 3.8 28 63-91 2-29 (30)
99 PF13606 Ank_3: Ankyrin repeat 98.3 1.1E-06 2.3E-11 61.4 3.9 30 97-129 1-30 (30)
100 KOG0705 GTPase-activating prot 98.2 2.9E-06 6.3E-11 94.0 8.6 93 18-127 626-720 (749)
101 PF00023 Ank: Ankyrin repeat H 98.2 1.6E-06 3.4E-11 61.5 4.3 31 98-131 2-32 (33)
102 KOG0783 Uncharacterized conser 98.2 4.6E-07 1E-11 103.5 2.4 83 90-182 45-128 (1267)
103 PF00023 Ank: Ankyrin repeat H 98.1 2.9E-06 6.2E-11 60.2 4.1 31 62-93 1-31 (33)
104 KOG0705 GTPase-activating prot 98.1 4.7E-06 1E-10 92.5 7.4 92 67-167 628-721 (749)
105 KOG0522 Ankyrin repeat protein 98.0 6.7E-06 1.5E-10 90.8 6.3 88 65-162 22-110 (560)
106 KOG3609 Receptor-activated Ca2 98.0 1.1E-05 2.4E-10 93.4 8.1 127 14-168 23-159 (822)
107 KOG0522 Ankyrin repeat protein 98.0 1.6E-05 3.5E-10 87.9 7.8 87 19-123 23-110 (560)
108 KOG0782 Predicted diacylglycer 97.7 3.7E-05 8.1E-10 85.1 5.7 102 67-179 870-973 (1004)
109 COG5063 CTH1 CCCH-type Zn-fing 97.7 1.8E-05 3.9E-10 82.0 3.1 68 248-315 225-307 (351)
110 KOG0521 Putative GTPase activa 97.7 2.5E-05 5.4E-10 92.4 4.3 78 61-143 654-731 (785)
111 KOG0511 Ankyrin repeat protein 97.7 0.00011 2.4E-09 78.5 7.9 86 64-163 37-122 (516)
112 KOG2384 Major histocompatibili 97.6 0.0002 4.4E-09 70.4 8.3 69 60-132 9-77 (223)
113 KOG2384 Major histocompatibili 97.4 0.00029 6.3E-09 69.3 5.8 70 88-167 3-73 (223)
114 KOG0520 Uncharacterized conser 97.3 0.00023 5.1E-09 84.4 4.6 92 60-162 605-702 (975)
115 KOG0511 Ankyrin repeat protein 97.1 0.0018 3.8E-08 69.5 9.1 86 16-123 36-121 (516)
116 KOG0520 Uncharacterized conser 97.0 0.00052 1.1E-08 81.5 3.8 97 60-168 571-669 (975)
117 KOG2494 C3H1-type Zn-finger pr 97.0 0.00027 5.8E-09 74.5 1.0 64 252-317 38-104 (331)
118 KOG0521 Putative GTPase activa 96.8 0.0014 3E-08 78.0 5.4 88 15-121 655-742 (785)
119 PF00642 zf-CCCH: Zinc finger 96.5 0.00057 1.2E-08 46.6 -0.2 22 284-305 1-26 (27)
120 KOG2505 Ankyrin repeat protein 95.8 0.019 4.1E-07 63.8 6.8 63 76-142 404-471 (591)
121 smart00248 ANK ankyrin repeats 95.8 0.015 3.2E-07 37.1 3.8 27 63-90 2-28 (30)
122 smart00248 ANK ankyrin repeats 95.6 0.021 4.5E-07 36.3 3.9 29 97-128 1-29 (30)
123 KOG1677 CCCH-type Zn-finger pr 95.5 0.009 2E-07 64.4 3.0 61 252-312 87-163 (332)
124 KOG2505 Ankyrin repeat protein 95.5 0.035 7.7E-07 61.7 7.4 85 22-121 396-480 (591)
125 PF00642 zf-CCCH: Zinc finger 95.3 0.0037 8.1E-08 42.6 -0.6 25 249-273 1-26 (27)
126 COG5063 CTH1 CCCH-type Zn-fing 95.1 0.026 5.6E-07 59.2 4.6 65 245-309 268-341 (351)
127 smart00356 ZnF_C3H1 zinc finge 95.1 0.015 3.3E-07 38.9 2.0 24 250-273 3-26 (27)
128 smart00356 ZnF_C3H1 zinc finge 94.6 0.029 6.4E-07 37.5 2.4 23 284-306 2-27 (27)
129 KOG3609 Receptor-activated Ca2 94.5 0.07 1.5E-06 62.9 6.6 89 16-129 62-159 (822)
130 PF14608 zf-CCCH_2: Zinc finge 92.8 0.073 1.6E-06 33.3 1.7 18 288-305 1-19 (19)
131 KOG2333 Uncharacterized conser 90.4 0.12 2.5E-06 57.7 1.3 57 250-308 75-142 (614)
132 KOG1040 Polyadenylation factor 89.5 0.2 4.3E-06 54.0 2.1 26 248-273 74-99 (325)
133 PF06128 Shigella_OspC: Shigel 88.7 1.5 3.2E-05 45.0 7.4 95 63-166 179-280 (284)
134 KOG1492 C3H1-type Zn-finger pr 88.5 0.23 4.9E-06 50.1 1.5 47 252-305 234-282 (377)
135 KOG3702 Nuclear polyadenylated 88.5 0.64 1.4E-05 53.7 5.3 41 267-307 598-646 (681)
136 KOG1040 Polyadenylation factor 79.4 1.5 3.2E-05 47.5 2.9 73 224-314 88-165 (325)
137 COG5084 YTH1 Cleavage and poly 78.3 1.8 4E-05 45.8 3.2 54 248-306 101-158 (285)
138 PF06128 Shigella_OspC: Shigel 77.5 3.8 8.2E-05 42.1 5.0 51 74-127 228-280 (284)
139 COG5252 Uncharacterized conser 76.3 0.42 9.1E-06 48.7 -2.1 59 250-308 84-177 (299)
140 KOG2185 Predicted RNA-processi 72.9 1.7 3.6E-05 47.7 1.2 37 277-313 131-174 (486)
141 KOG1763 Uncharacterized conser 71.4 0.71 1.5E-05 48.5 -1.9 25 250-274 91-115 (343)
142 COG5084 YTH1 Cleavage and poly 58.1 83 0.0018 33.6 10.3 76 213-308 109-191 (285)
143 PF03158 DUF249: Multigene fam 56.6 29 0.00063 34.7 6.2 45 102-161 147-191 (192)
144 PF11929 DUF3447: Domain of un 55.5 22 0.00047 29.9 4.6 48 64-123 7-54 (76)
145 PF11929 DUF3447: Domain of un 42.6 22 0.00048 29.8 2.7 47 100-162 8-54 (76)
146 KOG1492 C3H1-type Zn-finger pr 42.1 14 0.00031 37.5 1.6 51 251-310 206-260 (377)
147 KOG0193 Serine/threonine prote 41.6 62 0.0013 38.0 6.7 38 283-320 203-246 (678)
148 KOG2494 C3H1-type Zn-finger pr 39.0 20 0.00043 38.7 2.2 55 213-277 42-96 (331)
149 COG5152 Uncharacterized conser 38.2 13 0.00029 37.3 0.7 29 247-275 137-166 (259)
150 KOG4791 Uncharacterized conser 36.5 9.1 0.0002 43.0 -0.8 52 252-310 33-88 (667)
151 PF10650 zf-C3H1: Putative zin 34.4 23 0.00049 23.5 1.1 17 288-304 2-21 (23)
152 KOG1813 Predicted E3 ubiquitin 34.2 15 0.00033 39.0 0.4 32 246-277 181-213 (313)
153 COG5252 Uncharacterized conser 31.4 11 0.00024 38.7 -1.1 27 285-311 84-113 (299)
154 PF03158 DUF249: Multigene fam 28.9 94 0.002 31.2 4.9 45 67-122 147-191 (192)
155 KOG4791 Uncharacterized conser 26.5 32 0.00069 38.9 1.2 51 253-309 5-57 (667)
156 COG5152 Uncharacterized conser 26.2 28 0.00061 35.0 0.7 23 288-310 143-169 (259)
157 KOG1763 Uncharacterized conser 23.5 20 0.00043 38.1 -1.0 26 285-310 91-119 (343)
158 PF08195 TRI9: TRI9 protein; 21.7 43 0.00092 24.8 0.7 10 610-619 13-22 (43)
159 COG5175 MOT2 Transcriptional r 20.9 1.2E+02 0.0025 33.2 4.0 16 382-397 349-364 (480)
No 1
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=100.00 E-value=2.5e-82 Score=683.31 Aligned_cols=501 Identities=41% Similarity=0.606 Sum_probs=391.2
Q ss_pred CCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccc
Q 006236 15 NKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRAC 94 (655)
Q Consensus 15 ~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~ 94 (655)
...|.|.+.++.+++..|++++++....++...+||+++++.+.|..+.+|+|++|+.+|.++++++|+..+..++|..|
T Consensus 10 ~~ls~~~e~~~~~~~~~~k~~~~e~~~~~~~~~~~~r~~~~~k~~~~~qR~~~~v~~~~Gs~~~~~~i~~~~~~e~~~~C 89 (528)
T KOG1595|consen 10 RALSCLSEFEAPNDYAYLKEFRVEQPLFLQHKCLQHRPFVCFKWHFLNQRRRRPVARRDGSFNYSPDIYCTKYDEVTGIC 89 (528)
T ss_pred hhhhcchhhccccHHHHHHHHHHhchhhhhhhhcccccchhhhhhhhccccccchhhhcCccccccceeecchhhccccC
Confidence 34577779999999999999999889999999999999999999999999999999999999999999999889999986
Q ss_pred CCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccCC
Q 006236 95 GSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVN 174 (655)
Q Consensus 95 d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g~ 174 (655)
..++. |+++.+...+..+.+..|+.+++..+.+|..|+-+...+.........+...+++.|++.+.--.+.+++..
T Consensus 90 ~~~~~---~C~~~g~s~~~~e~~~hL~~~k~~~~~tda~g~~~~~v~~~~~~~~~~~~r~~~~~l~e~~~~~~~~~~e~~ 166 (528)
T KOG1595|consen 90 PDGDE---HCAVLGRSVGDTERTYHLRYYKTLPCVTDARGNCVKNVLHCAFAHGPNDLRPPVEDLLELQGGSGLPDDEPE 166 (528)
T ss_pred CCCcc---cchhcccccCCcceeEeccccccccCccccCCCcccCcccccccCCccccccHHHHHHhcccccCccCCCcc
Confidence 55444 999888777779999999999999999999998775443211123446667888888887631111112222
Q ss_pred CCcccccccCcccccccccCCcccccCCccccccccccccccccccccccCCCCCccccCCCCCCCCCCCCCCCCCcCCC
Q 006236 175 IPVPQLSKDGTEKKEYPIDVSLPDINNGVYGTDDFRMYAFKIKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYTCVPC 254 (655)
Q Consensus 175 tpl~~l~~~~~~~keypvdlsl~di~~~~y~sde~rm~sfKvrpCsrayshDwteCp~~Hp~EnarRRdPr~y~Ys~~~C 254 (655)
.... ....+|++|..++||+ ++|++|+|+||.||+++|.|+++|||++|||+|++||+||||||+|+|+++.|
T Consensus 167 ~~~~------~~~~~y~~Dp~~pdi~-~~ys~DeFrMy~fKir~C~R~~shDwteCPf~HpgEkARRRDPRkyhYs~tpC 239 (528)
T KOG1595|consen 167 VESK------LDVTEYPEDPSWPDIN-GIYSSDEFRMYSFKIRRCSRPRSHDWTECPFAHPGEKARRRDPRKYHYSSTPC 239 (528)
T ss_pred cccc------cccccccCCCCccccc-ccccccceEEEeeeecccCCccCCCcccCCccCCCcccccCCcccccccCccC
Confidence 1110 1122999999999999 89999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCCCCcccccCCccccccCCcccccccccCCCCCCCCCCCCCCCCCCcccCcCCCCCCCCC-CCCCCCCcccc
Q 006236 255 PEFRKGACPKGDGCEYAHGVFESWLHPAQYRTRLCKDEIGCARKVCFFAHKPEELRPVYASTGSAMPS-PSPVSASAVDM 333 (655)
Q Consensus 255 P~~rkg~C~~Gd~C~yaH~~~E~~~HP~~ykt~~C~~~~~C~~~~C~faH~~~elr~~~~~~~~~~~~-~~~~~~~~~~~ 333 (655)
|+||+|.|++||.|+||||+||||+||.+|||++|+++++|+|.+|||||.++|||++++++|+++++ |+++.++ -.+
T Consensus 240 PefrkG~C~rGD~CEyaHgvfEcwLHPa~YRT~~CkDg~~C~RrvCfFAH~~eqLR~l~~s~~s~~~~sp~~s~~s-p~~ 318 (528)
T KOG1595|consen 240 PEFRKGSCERGDSCEYAHGVFECWLHPARYRTRKCKDGGYCPRRVCFFAHSPEQLRPLPPSTGSDRPSSPSSSSAS-PMM 318 (528)
T ss_pred cccccCCCCCCCccccccceehhhcCHHHhccccccCCCCCccceEeeecChHHhcccCCCCCCCCCCCcccccCC-CCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 5554321 112
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCCccc-CCCCCCC-CCCCCCCC-CCCCCccCCc-cccccccCcchhhhhhccccchh
Q 006236 334 TTLSPLSLGSASMPLPATSTPPMSPLAA-ASSPKSG-NLWQNKVN-LTPPALQLPG-SRLKTAFSARDLDLLLGLENRTS 409 (655)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~p~sp~~~-~~~~~~~-~~w~~~~~-~~~p~l~l~~-srl~~~~~ar~~~~~~~~~~~~~ 409 (655)
+...++ .-+|++.+||+||++. .++|+.. +.|++.++ ++.|+++|++ |||+++++||||+..-+++.
T Consensus 319 ~~~~~~------~~s~~~~~~p~sp~~~~~~~~~~~~~s~~~~~~~~~~p~~~~~~~Srl~s~~~a~~i~~~~~~~~--- 389 (528)
T KOG1595|consen 319 ASLRSL------PFSPSPGSPPLSPSANGVSSPIASGGSRSLNSNSPSSPAAPLRSFSRLSSSLSAADISMSSPMNL--- 389 (528)
T ss_pred cccccC------CCCCCCCCCCCCccccccccccccccccccCCCCCCCcccccccccccccccccccccccccccc---
Confidence 222222 2234448999999883 3344444 45655554 4899999999 99999999999865434331
Q ss_pred hHHHHHHHhhhcccCCCCCCCcccccccccccchHHHhhhcCCCchhhhccccccCCCCccccCCchhhhhhhhhhhhhc
Q 006236 410 NLQQQQLLDEISSLSSPSSWSKEYSRIGDVNRNLDKVFESLDPSMLSQLQGMSQKQSTPTQLQSPTGLQMRQNMNQLRAS 489 (655)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (655)
-||+++|++++.+. ..+++|+. + +
T Consensus 390 -------------------------------~~l~~~f~s~~sss------------------l~~~~~~~--~-----~ 413 (528)
T KOG1595|consen 390 -------------------------------GNLSELFSSPDSSS------------------LNPQLQVL--S-----S 413 (528)
T ss_pred -------------------------------ccchhhhcCccccc------------------cchhhhhc--c-----c
Confidence 17999999987631 11233311 1 1
Q ss_pred CCCCCCCCCCCCCC---CCCCCCchhHHHh--hhhhhhh-HHHHhhh--hhhhccccccccccCCCCCCCCCCCCCCCCC
Q 006236 490 YPAANLSSSPVRKP---SSFGYDSSAAVAA--AVMNSRS-SAFAKRS--QSFIDRGAVTSRAGLSMVSNPPTIRSSNLSD 561 (655)
Q Consensus 490 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~r~-~a~a~r~--~~~~~r~~~~~~~~~~~~~~~~~~~~~~~s~ 561 (655)
+ +.+|+..+ ..++++.+.+... .+|++|. .++++|+ .++ +.+.+ ..+.-....+|
T Consensus 414 ~-----~tsP~~~~~~~~~~~~e~s~~~~~~~~~~~~r~l~~~l~~~~~~s~--------~~~~~----~~~~~~~~~~d 476 (528)
T KOG1595|consen 414 A-----PTSPVFTDTASFGSSVESSPAMEGRSQVMSSRELRASLKRSSTLSD--------KPAMN----SSGQFSFNNSD 476 (528)
T ss_pred C-----CcCCcCCcccccccccccchhhhcccccccchhhhhhhcccccccc--------ccccc----CccccccccCC
Confidence 1 23455553 2245665555555 6899998 7887776 222 11111 11111235589
Q ss_pred CCCCCC-CCCcccchhhhcccccccccccCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhccCCC
Q 006236 562 WSSPDG-KLDWGVQGDELNKLKKSASFGFRSNNITTPTTKGFTPSSSNVDEPDVSWVNSLVKDVT 625 (655)
Q Consensus 562 w~s~~g-k~dw~~~~~e~~~~r~s~sf~~~~~~~~~~~~~~~~~~~~~~~epd~swv~~~~~~~~ 625 (655)
||+.+| |+||+||+|||+|+|++.||+.+.++ ||||||||+||||.+
T Consensus 477 ~g~~~g~~~d~~~~~~~l~~~r~~~s~~~~~~~-----------------~pd~swv~~ll~~~~ 524 (528)
T KOG1595|consen 477 WGPRAGELLDWGVQSDLLNKLRESTSFELGSAG-----------------EPDVSWVQSLLKEPA 524 (528)
T ss_pred cCcccCcccchhhhHHHHhhcccCcccccCCCC-----------------CcCcchhhhhccccc
Confidence 999999 99999999999999999999988664 999999999999986
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.87 E-value=2.1e-22 Score=192.69 Aligned_cols=143 Identities=21% Similarity=0.273 Sum_probs=131.9
Q ss_pred CCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccc
Q 006236 15 NKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRAC 94 (655)
Q Consensus 15 ~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~ 94 (655)
+|.++||.|+..|..+.+..||.+.+..+|.+ |..|+||||+||..|+.++|+.|+....+|+|..
T Consensus 37 D~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddk-------------DdaGWtPlhia~s~g~~evVk~Ll~r~~advna~- 102 (226)
T KOG4412|consen 37 DGRTPLHWACSFGHVEIVYFLLSQPNVKPDDK-------------DDAGWTPLHIAASNGNDEVVKELLNRSGADVNAT- 102 (226)
T ss_pred cCCceeeeeeecCchhHHHHHHhcCCCCCCCc-------------cccCCchhhhhhhcCcHHHHHHHhcCCCCCccee-
Confidence 78899999999999988888887788888887 4899999999999999999999999933999999
Q ss_pred CCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccCC
Q 006236 95 GSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVN 174 (655)
Q Consensus 95 d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g~ 174 (655)
+..|.|+||||+..|. .+|+.+|+++|+.++++|..|.||||-|+. .|.++++++|+..|+.+|..|..|.
T Consensus 103 tn~G~T~LHyAagK~r---~eIaqlLle~ga~i~~kD~~~qtplHRAAa------vGklkvie~Li~~~a~~n~qDk~G~ 173 (226)
T KOG4412|consen 103 TNGGQTCLHYAAGKGR---LEIAQLLLEKGALIRIKDKQGQTPLHRAAA------VGKLKVIEYLISQGAPLNTQDKYGF 173 (226)
T ss_pred cCCCcceehhhhcCCh---hhHHHHHHhcCCCCcccccccCchhHHHHh------ccchhhHHHHHhcCCCCCcccccCc
Confidence 9999999999999999 999999999999999999999999999987 8999999999999999999999999
Q ss_pred CCcccc
Q 006236 175 IPVPQL 180 (655)
Q Consensus 175 tpl~~l 180 (655)
||+...
T Consensus 174 TpL~~a 179 (226)
T KOG4412|consen 174 TPLHHA 179 (226)
T ss_pred cHHHHH
Confidence 998443
No 3
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.86 E-value=9.2e-22 Score=188.33 Aligned_cols=140 Identities=21% Similarity=0.251 Sum_probs=131.6
Q ss_pred ccCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccc
Q 006236 13 LYNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNR 92 (655)
Q Consensus 13 ~~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~ 92 (655)
+..|.+|||.||..|+.+.|+.||-+-|+|+|... ..|+|||||||..|..+|+.+||++| +.|+.
T Consensus 69 DdaGWtPlhia~s~g~~evVk~Ll~r~~advna~t-------------n~G~T~LHyAagK~r~eIaqlLle~g-a~i~~ 134 (226)
T KOG4412|consen 69 DDAGWTPLHIAASNGNDEVVKELLNRSGADVNATT-------------NGGQTCLHYAAGKGRLEIAQLLLEKG-ALIRI 134 (226)
T ss_pred cccCCchhhhhhhcCcHHHHHHHhcCCCCCcceec-------------CCCcceehhhhcCChhhHHHHHHhcC-CCCcc
Confidence 46799999999999999999999886699999985 89999999999999999999999999 99999
Q ss_pred ccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCccccc
Q 006236 93 ACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEEL 172 (655)
Q Consensus 93 ~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~ 172 (655)
+ |..|.||||-|+..|+ ++++++|+..|+.+|.+|..|+||||.|.. .++.++..+|+++||+++.+|.+
T Consensus 135 k-D~~~qtplHRAAavGk---lkvie~Li~~~a~~n~qDk~G~TpL~~al~------e~~~d~a~lLV~~gAd~~~edke 204 (226)
T KOG4412|consen 135 K-DKQGQTPLHRAAAVGK---LKVIEYLISQGAPLNTQDKYGFTPLHHALA------EGHPDVAVLLVRAGADTDREDKE 204 (226)
T ss_pred c-ccccCchhHHHHhccc---hhhHHHHHhcCCCCCcccccCccHHHHHHh------ccCchHHHHHHHhccceeecccc
Confidence 9 9999999999999999 999999999999999999999999999964 78999999999999999999987
Q ss_pred CCCCc
Q 006236 173 VNIPV 177 (655)
Q Consensus 173 g~tpl 177 (655)
| |++
T Consensus 205 ~-t~~ 208 (226)
T KOG4412|consen 205 G-TAL 208 (226)
T ss_pred C-chH
Confidence 7 664
No 4
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.82 E-value=1.1e-19 Score=182.66 Aligned_cols=146 Identities=23% Similarity=0.286 Sum_probs=100.9
Q ss_pred ccccCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcC--CHHHHHHHHHcCCC
Q 006236 11 GALYNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFG--SVAVLKYVIETGKV 88 (655)
Q Consensus 11 ~l~~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G--~~evvk~LL~~G~a 88 (655)
.++....+||+.|+..|+.+.++.++.. +|.. |..|.||||+|+..+ +.+++++||+.| +
T Consensus 16 ~~~~~~~~pL~~A~~~~~~~~vk~Li~~----~n~~-------------~~~g~TpLh~a~~~~~~~~eiv~~Ll~~g-a 77 (209)
T PHA02859 16 YLFYRYCNPLFYYVEKDDIEGVKKWIKF----VNDC-------------NDLYETPIFSCLEKDKVNVEILKFLIENG-A 77 (209)
T ss_pred HHhhccCcHHHHHHHhCcHHHHHHHHHh----hhcc-------------CccCCCHHHHHHHcCCCCHHHHHHHHHCC-C
Confidence 3345567777777777888777777652 4444 366778888777643 677788888777 7
Q ss_pred ccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCc
Q 006236 89 NVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFE 168 (655)
Q Consensus 89 DvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~ 168 (655)
|+|.+.+..|.||||+|+..+.....+++++|+++|+|+|.+|..|.||||+|+. ...++.+++++|+++|++++.
T Consensus 78 dvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~----~~~~~~~iv~~Li~~gadin~ 153 (209)
T PHA02859 78 DVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMC----NFNVRINVIKLLIDSGVSFLN 153 (209)
T ss_pred CCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH----hccCCHHHHHHHHHcCCCccc
Confidence 7777622467778887765431112777777777788887777778888877653 123567777877777777777
Q ss_pred ccccCCCCcc
Q 006236 169 EEELVNIPVP 178 (655)
Q Consensus 169 ~d~~g~tpl~ 178 (655)
+|.+|.+++.
T Consensus 154 ~d~~g~t~Lh 163 (209)
T PHA02859 154 KDFDNNNILY 163 (209)
T ss_pred ccCCCCcHHH
Confidence 7777777775
No 5
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.81 E-value=5.5e-20 Score=203.56 Aligned_cols=144 Identities=26% Similarity=0.318 Sum_probs=135.0
Q ss_pred chHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCC
Q 006236 17 SSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGS 96 (655)
Q Consensus 17 ~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~ 96 (655)
..-+..|+..|+++.++.+++.+|.+++..| .+|.|+||+||.+++++++++||++| +|||..++.
T Consensus 45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D-------------~~g~tlLHWAAiNNrl~v~r~li~~g-advn~~gG~ 110 (600)
T KOG0509|consen 45 LDDIVKATQYGELETVKELVESEGESVNNPD-------------REGVTLLHWAAINNRLDVARYLISHG-ADVNAIGGV 110 (600)
T ss_pred hhhhhhHhhcchHHHHHHHHhhcCcCCCCCC-------------cCCccceeHHHHcCcHHHHHHHHHcC-CCccccCCC
Confidence 5678899999999999999997799999985 79999999999999999999999999 999999778
Q ss_pred CCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccCCCC
Q 006236 97 DGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNIP 176 (655)
Q Consensus 97 ~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g~tp 176 (655)
-+.||||||+++|+ +.+|++|+++|||++.+|.+|.+|||+|+. .++.-++-+||.+|+|++.+|.+|+||
T Consensus 111 l~stPLHWAar~G~---~~vv~lLlqhGAdpt~~D~~G~~~lHla~~------~~~~~~vayll~~~~d~d~~D~~grTp 181 (600)
T KOG0509|consen 111 LGSTPLHWAARNGH---ISVVDLLLQHGADPTLKDKQGLTPLHLAAQ------FGHTALVAYLLSKGADIDLRDNNGRTP 181 (600)
T ss_pred CCCCcchHHHHcCc---HHHHHHHHHcCCCCceecCCCCcHHHHHHH------hCchHHHHHHHHhcccCCCcCCCCCCH
Confidence 99999999999999 999999999999999999999999999997 899999999999999999999999999
Q ss_pred ccccccc
Q 006236 177 VPQLSKD 183 (655)
Q Consensus 177 l~~l~~~ 183 (655)
+..++.+
T Consensus 182 LmwAayk 188 (600)
T KOG0509|consen 182 LMWAAYK 188 (600)
T ss_pred HHHHHHh
Confidence 8655444
No 6
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.81 E-value=7.4e-20 Score=202.56 Aligned_cols=148 Identities=23% Similarity=0.291 Sum_probs=131.7
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccc
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRA 93 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~ 93 (655)
.+|.+.||.||.++.++.++.+|+ +|++||..+ +.-+.|||||||++|++.+|++|+++| ||++.+
T Consensus 76 ~~g~tlLHWAAiNNrl~v~r~li~-~gadvn~~g------------G~l~stPLHWAar~G~~~vv~lLlqhG-Adpt~~ 141 (600)
T KOG0509|consen 76 REGVTLLHWAAINNRLDVARYLIS-HGADVNAIG------------GVLGSTPLHWAARNGHISVVDLLLQHG-ADPTLK 141 (600)
T ss_pred cCCccceeHHHHcCcHHHHHHHHH-cCCCccccC------------CCCCCCcchHHHHcCcHHHHHHHHHcC-CCCcee
Confidence 467777777777777777666665 999999987 577899999999999999999999999 999999
Q ss_pred cCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCccc-cc
Q 006236 94 CGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEE-EL 172 (655)
Q Consensus 94 ~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d-~~ 172 (655)
|..|.|+||.|+.+|+ ..+|-+||.+|+|+|.+|.+|+||||+|+. .+....+..||..|+.+...| ++
T Consensus 142 -D~~G~~~lHla~~~~~---~~~vayll~~~~d~d~~D~~grTpLmwAay------kg~~~~v~~LL~f~a~~~~~d~~~ 211 (600)
T KOG0509|consen 142 -DKQGLTPLHLAAQFGH---TALVAYLLSKGADIDLRDNNGRTPLMWAAY------KGFALFVRRLLKFGASLLLTDDNH 211 (600)
T ss_pred -cCCCCcHHHHHHHhCc---hHHHHHHHHhcccCCCcCCCCCCHHHHHHH------hcccHHHHHHHHhccccccccccc
Confidence 9999999999999999 999999999999999999999999999986 677666999999999999987 99
Q ss_pred CCCCcccccccCc
Q 006236 173 VNIPVPQLSKDGT 185 (655)
Q Consensus 173 g~tpl~~l~~~~~ 185 (655)
|.||++.+...++
T Consensus 212 g~TpLHwa~~~gN 224 (600)
T KOG0509|consen 212 GNTPLHWAVVGGN 224 (600)
T ss_pred CCchHHHHHhcCC
Confidence 9999966554444
No 7
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.80 E-value=5.3e-19 Score=171.32 Aligned_cols=137 Identities=13% Similarity=0.215 Sum_probs=120.0
Q ss_pred cCCchHHHHHHHhCCHHHHHH---HHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHH---HHHHHHcCC
Q 006236 14 YNKSSILLELSASDDISAFKR---EIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAV---LKYVIETGK 87 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~---LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~ev---vk~LL~~G~ 87 (655)
..+.++||+|++.|++..+++ +|.+.|.+++..+ ..|+||||+|+.+|+.++ +++|++.|
T Consensus 18 ~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d-------------~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~G- 83 (166)
T PHA02743 18 EDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYD-------------HHGRQCTHMVAWYDRANAVMKIELLVNMG- 83 (166)
T ss_pred cCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccC-------------CCCCcHHHHHHHhCccCHHHHHHHHHHcC-
Confidence 346689999999999976655 4556888888874 889999999999988654 89999999
Q ss_pred CccccccC-CCCChHHHHHHHcCCCChHHHHHHHHh-CCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCC
Q 006236 88 VNVNRACG-SDGFTALHCAVAGGANSSFEVVKLLLS-ASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHT 165 (655)
Q Consensus 88 aDvN~~~d-~~G~TpLH~Aa~~G~~~~~eiVklLL~-~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAd 165 (655)
+++|.+ + ..|.||||+|+..|+ .+++++|+. .|++++.+|..|.||||+|+. .++.+++++|+.+|++
T Consensus 84 adin~~-d~~~g~TpLh~A~~~g~---~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~------~~~~~iv~~Ll~~ga~ 153 (166)
T PHA02743 84 ADINAR-ELGTGNTLLHIAASTKN---YELAEWLCRQLGVNLGAINYQHETAYHIAYK------MRDRRMMEILRANGAV 153 (166)
T ss_pred CCCCCC-CCCCCCcHHHHHHHhCC---HHHHHHHHhccCCCccCcCCCCCCHHHHHHH------cCCHHHHHHHHHcCCC
Confidence 999998 6 589999999999999 999999995 799999999999999999987 7899999999999999
Q ss_pred CCcccccCC
Q 006236 166 IFEEEELVN 174 (655)
Q Consensus 166 in~~d~~g~ 174 (655)
++..+..|.
T Consensus 154 ~~~~~~~~~ 162 (166)
T PHA02743 154 CDDPLSIGL 162 (166)
T ss_pred CCCcccCCc
Confidence 997665543
No 8
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.79 E-value=6.7e-19 Score=176.86 Aligned_cols=146 Identities=18% Similarity=0.175 Sum_probs=124.3
Q ss_pred ccCCchHHHHHHHhC--CHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHc---CCHHHHHHHHHcCC
Q 006236 13 LYNKSSILLELSASD--DISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMF---GSVAVLKYVIETGK 87 (655)
Q Consensus 13 ~~~g~s~LL~AAa~g--d~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~---G~~evvk~LL~~G~ 87 (655)
...|.|+||.|+..+ +.+.++.+ .++|+++|.++ +..|.||||+|+.. ++.+++++|+++|
T Consensus 48 ~~~g~TpLh~a~~~~~~~~eiv~~L-l~~gadvn~~~------------~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~g- 113 (209)
T PHA02859 48 NDLYETPIFSCLEKDKVNVEILKFL-IENGADVNFKT------------RDNNLSALHHYLSFNKNVEPEILKILIDSG- 113 (209)
T ss_pred CccCCCHHHHHHHcCCCCHHHHHHH-HHCCCCCCccC------------CCCCCCHHHHHHHhCccccHHHHHHHHHCC-
Confidence 356889999988754 55555544 55999999874 35799999998864 4799999999999
Q ss_pred CccccccCCCCChHHHHHHHc--CCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCC
Q 006236 88 VNVNRACGSDGFTALHCAVAG--GANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHT 165 (655)
Q Consensus 88 aDvN~~~d~~G~TpLH~Aa~~--G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAd 165 (655)
+|+|.+ +..|.||||+|+.. ++ .+++++|++.|++++.+|.+|.||||.++. ..++.+++++|+++|++
T Consensus 114 adin~~-d~~G~TpLh~a~~~~~~~---~~iv~~Li~~gadin~~d~~g~t~Lh~~a~-----~~~~~~iv~~Ll~~Gad 184 (209)
T PHA02859 114 SSITEE-DEDGKNLLHMYMCNFNVR---INVIKLLIDSGVSFLNKDFDNNNILYSYIL-----FHSDKKIFDFLTSLGID 184 (209)
T ss_pred CCCCCc-CCCCCCHHHHHHHhccCC---HHHHHHHHHcCCCcccccCCCCcHHHHHHH-----hcCCHHHHHHHHHcCCC
Confidence 999998 99999999998763 56 999999999999999999999999996543 26789999999999999
Q ss_pred CCcccccCCCCccccc
Q 006236 166 IFEEEELVNIPVPQLS 181 (655)
Q Consensus 166 in~~d~~g~tpl~~l~ 181 (655)
++.+|..|.+|+..+.
T Consensus 185 i~~~d~~g~tpl~la~ 200 (209)
T PHA02859 185 INETNKSGYNCYDLIK 200 (209)
T ss_pred CCCCCCCCCCHHHHHh
Confidence 9999999999986553
No 9
>PHA02791 ankyrin-like protein; Provisional
Probab=99.79 E-value=9.3e-19 Score=183.86 Aligned_cols=149 Identities=15% Similarity=0.117 Sum_probs=95.2
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCC----cc--------------cccccCCccCCCCCChHHHHHHHcCC
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFDVDEPS----FW--------------YGRRIGSKKMGFEERTPIMIAAMFGS 75 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~d----lw--------------~g~~~~~~~~d~~G~TPLh~AA~~G~ 75 (655)
.+|.|+||+|+..|+.+.++.++. .|+++|..+ +. .....+....|.+|+||||+|+..|+
T Consensus 28 ~~G~TpLh~Aa~~g~~eiv~~Ll~-~ga~~n~~d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~ 106 (284)
T PHA02791 28 VHGHSALYYAIADNNVRLVCTLLN-AGALKNLLENEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGN 106 (284)
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHH-CcCCCcCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 346666666666666555554443 566655433 00 00111222235677777777777777
Q ss_pred HHHHHHHHHcCCCccccccCCCC-ChHHHHHHHcCCCChHHHHHHHHhCCCCCcccC-CCCCCccchhhhccCCCCcChH
Q 006236 76 VAVLKYVIETGKVNVNRACGSDG-FTALHCAVAGGANSSFEVVKLLLSASADVNCVD-VYGNKPVDLIPVAMKSPLHSRK 153 (655)
Q Consensus 76 ~evvk~LL~~G~aDvN~~~d~~G-~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D-~~G~TPLhlAa~~~~~~~~g~~ 153 (655)
.+++++|+++| +++|.. +..| .||||+|+..|+ .++|++||+.+.+. .| ..|.||||+|+. .|+.
T Consensus 107 ~eivk~Ll~~g-adin~~-~~~g~~TpL~~Aa~~g~---~eivk~LL~~~~~~--~d~~~g~TpLh~Aa~------~g~~ 173 (284)
T PHA02791 107 MQTVKLFVKKN-WRLMFY-GKTGWKTSFYHAVMLND---VSIVSYFLSEIPST--FDLAILLSCIHITIK------NGHV 173 (284)
T ss_pred HHHHHHHHHCC-CCcCcc-CCCCCcHHHHHHHHcCC---HHHHHHHHhcCCcc--cccccCccHHHHHHH------cCCH
Confidence 77777777777 777766 5555 367777777777 77777777765433 22 246777777776 7778
Q ss_pred HHHHHHHhCCCCCCcccccCCCC
Q 006236 154 RAIELLLKGDHTIFEEEELVNIP 176 (655)
Q Consensus 154 eivelLL~~GAdin~~d~~g~tp 176 (655)
+++++||++|++++.+|..|.+|
T Consensus 174 eiv~lLL~~gAd~n~~d~~g~t~ 196 (284)
T PHA02791 174 DMMILLLDYMTSTNTNNSLLFIP 196 (284)
T ss_pred HHHHHHHHCCCCCCcccCCCCCh
Confidence 88888888888888877777765
No 10
>PHA02791 ankyrin-like protein; Provisional
Probab=99.78 E-value=1.6e-18 Score=182.16 Aligned_cols=105 Identities=17% Similarity=0.212 Sum_probs=92.3
Q ss_pred CCCC-ChHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCc-
Q 006236 60 GFEE-RTPIMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKP- 137 (655)
Q Consensus 60 d~~G-~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TP- 137 (655)
+..| .||||+|+..|+.+++++||+++ .+... ...|.||||+|+..|+ .+++++||++|+++|.+|..|.||
T Consensus 124 ~~~g~~TpL~~Aa~~g~~eivk~LL~~~-~~~~d--~~~g~TpLh~Aa~~g~---~eiv~lLL~~gAd~n~~d~~g~t~~ 197 (284)
T PHA02791 124 GKTGWKTSFYHAVMLNDVSIVSYFLSEI-PSTFD--LAILLSCIHITIKNGH---VDMMILLLDYMTSTNTNNSLLFIPD 197 (284)
T ss_pred CCCCCcHHHHHHHHcCCHHHHHHHHhcC-Ccccc--cccCccHHHHHHHcCC---HHHHHHHHHCCCCCCcccCCCCChH
Confidence 4666 59999999999999999999987 44321 2358999999999999 999999999999999999999987
Q ss_pred cchhhhccCCCCcChHHHHHHHHhCCCCCCcccccCCCCc
Q 006236 138 VDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNIPV 177 (655)
Q Consensus 138 LhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g~tpl 177 (655)
||+|+. .++.+++++||++|++++.+|.++ +++
T Consensus 198 L~~Aa~------~~~~e~v~lLl~~Ga~in~~~~~~-~~l 230 (284)
T PHA02791 198 IKLAID------NKDLEMLQALFKYDINIYSVNLEN-VLL 230 (284)
T ss_pred HHHHHH------cCCHHHHHHHHHCCCCCccCcccC-ccC
Confidence 999997 999999999999999999988744 444
No 11
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.78 E-value=1.1e-18 Score=195.25 Aligned_cols=140 Identities=21% Similarity=0.270 Sum_probs=127.6
Q ss_pred CchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccC
Q 006236 16 KSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACG 95 (655)
Q Consensus 16 g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d 95 (655)
|.|+||.||..|+.+.++.+|. .|+++|..+ ..|.||||+|+..|+.+++++|++.| +++|.+ +
T Consensus 168 g~tpLh~A~~~~~~~iv~~Ll~-~gad~n~~d-------------~~g~tpLh~A~~~~~~~iv~~Ll~~g-a~in~~-d 231 (477)
T PHA02878 168 GNTALHYATENKDQRLTELLLS-YGANVNIPD-------------KTNNSPLHHAVKHYNKPIVHILLENG-ASTDAR-D 231 (477)
T ss_pred CCCHHHHHHhCCCHHHHHHHHH-CCCCCCCcC-------------CCCCCHHHHHHHhCCHHHHHHHHHcC-CCCCCC-C
Confidence 8899999999999888877776 899999884 88999999999999999999999999 999998 9
Q ss_pred CCCChHHHHHHHc-CCCChHHHHHHHHhCCCCCcccCC-CCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccC
Q 006236 96 SDGFTALHCAVAG-GANSSFEVVKLLLSASADVNCVDV-YGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELV 173 (655)
Q Consensus 96 ~~G~TpLH~Aa~~-G~~~~~eiVklLL~~GADvn~~D~-~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g 173 (655)
..|.||||+|+.. ++ .+++++|+++|+++|.++. .|.||||+|+ ++.+++++|+++|+|++..|..|
T Consensus 232 ~~g~TpLh~A~~~~~~---~~iv~~Ll~~gadvn~~~~~~g~TpLh~A~--------~~~~~v~~Ll~~gadin~~d~~g 300 (477)
T PHA02878 232 KCGNTPLHISVGYCKD---YDILKLLLEHGVDVNAKSYILGLTALHSSI--------KSERKLKLLLEYGADINSLNSYK 300 (477)
T ss_pred CCCCCHHHHHHHhcCC---HHHHHHHHHcCCCCCccCCCCCCCHHHHHc--------cCHHHHHHHHHCCCCCCCcCCCC
Confidence 9999999999975 67 9999999999999999986 7999999994 46789999999999999999999
Q ss_pred CCCcccccc
Q 006236 174 NIPVPQLSK 182 (655)
Q Consensus 174 ~tpl~~l~~ 182 (655)
.||+..+..
T Consensus 301 ~TpL~~A~~ 309 (477)
T PHA02878 301 LTPLSSAVK 309 (477)
T ss_pred CCHHHHHHH
Confidence 999866543
No 12
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.78 E-value=1.1e-18 Score=195.17 Aligned_cols=142 Identities=23% Similarity=0.307 Sum_probs=123.7
Q ss_pred CCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHH-----------------
Q 006236 15 NKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVA----------------- 77 (655)
Q Consensus 15 ~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~e----------------- 77 (655)
.+++|||.||..|+.+.++.||. .|+++|..+ ..|+||||+||..|+.+
T Consensus 36 ~~~tPLh~A~~~g~~e~vk~Ll~-~gadvn~~d-------------~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~ 101 (477)
T PHA02878 36 IPFIPLHQAVEARNLDVVKSLLT-RGHNVNQPD-------------HRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYT 101 (477)
T ss_pred cCcchHHHHHHcCCHHHHHHHHH-CCCCCCCCC-------------CCCCCHHHHHHHCccHhHHHHHHHHHhccccccc
Confidence 47899999999999999988886 899999884 88999999998765432
Q ss_pred -----------------------------------------------HHHHHHHcCCCccccccCCC-CChHHHHHHHcC
Q 006236 78 -----------------------------------------------VLKYVIETGKVNVNRACGSD-GFTALHCAVAGG 109 (655)
Q Consensus 78 -----------------------------------------------vvk~LL~~G~aDvN~~~d~~-G~TpLH~Aa~~G 109 (655)
++++|+++| +|+|.. +.. |.||||+|+..|
T Consensus 102 ~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~g-adin~~-~~~~g~tpLh~A~~~~ 179 (477)
T PHA02878 102 LVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYG-ADINMK-DRHKGNTALHYATENK 179 (477)
T ss_pred hhhHHHHHHcCCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcC-CCCCcc-CCCCCCCHHHHHHhCC
Confidence 666777777 888888 666 999999999999
Q ss_pred CCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccCCCCccccc
Q 006236 110 ANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNIPVPQLS 181 (655)
Q Consensus 110 ~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g~tpl~~l~ 181 (655)
+ .+++++|+++|++++..|..|.||||+|+. .++.+++++|+++|++++.+|..|.+|+..+.
T Consensus 180 ~---~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~------~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~ 242 (477)
T PHA02878 180 D---QRLTELLLSYGANVNIPDKTNNSPLHHAVK------HYNKPIVHILLENGASTDARDKCGNTPLHISV 242 (477)
T ss_pred C---HHHHHHHHHCCCCCCCcCCCCCCHHHHHHH------hCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 9 999999999999999999999999999987 88899999999999999999999999886543
No 13
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.77 E-value=2.9e-18 Score=187.94 Aligned_cols=149 Identities=19% Similarity=0.209 Sum_probs=93.3
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCC------ccccccc---------------CCccCCCCCChHHHHHHH
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFDVDEPS------FWYGRRI---------------GSKKMGFEERTPIMIAAM 72 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~d------lw~g~~~---------------~~~~~d~~G~TPLh~AA~ 72 (655)
..|.|+||.|+..++.+.++.++. .|++++..+ +.+.... .....+.+|.||||+|+.
T Consensus 33 ~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 111 (413)
T PHA02875 33 YDGISPIKLAMKFRDSEAIKLLMK-HGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATI 111 (413)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-CCCCccccCCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHH
Confidence 368899998988888887766665 888877653 0000000 001123456666666666
Q ss_pred cCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcCh
Q 006236 73 FGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSR 152 (655)
Q Consensus 73 ~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~ 152 (655)
.|+.+++++|++.| +|++.. +..|.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .++
T Consensus 112 ~~~~~iv~~Ll~~g-ad~~~~-~~~g~tpLh~A~~~~~---~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~------~g~ 180 (413)
T PHA02875 112 LKKLDIMKLLIARG-ADPDIP-NTDKFSPLHLAVMMGD---IKGIELLIDHKACLDIEDCCGCTPLIIAMA------KGD 180 (413)
T ss_pred hCCHHHHHHHHhCC-CCCCCC-CCCCCCHHHHHHHcCC---HHHHHHHHhcCCCCCCCCCCCCCHHHHHHH------cCC
Confidence 66666666666666 666665 6666666666666666 666666666666666666666666666665 566
Q ss_pred HHHHHHHHhCCCCCCcccccCC
Q 006236 153 KRAIELLLKGDHTIFEEEELVN 174 (655)
Q Consensus 153 ~eivelLL~~GAdin~~d~~g~ 174 (655)
.+++++|+++|++++..+..|.
T Consensus 181 ~eiv~~Ll~~ga~~n~~~~~~~ 202 (413)
T PHA02875 181 IAICKMLLDSGANIDYFGKNGC 202 (413)
T ss_pred HHHHHHHHhCCCCCCcCCCCCC
Confidence 6666666666666666555554
No 14
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.76 E-value=3.5e-18 Score=188.98 Aligned_cols=145 Identities=21% Similarity=0.233 Sum_probs=113.3
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccc
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRA 93 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~ 93 (655)
..|.|+||.|+..|+.+.++.++. .|+++|..+ ..|.||||+|+..|+.+++++|++.| ++++..
T Consensus 122 ~~g~T~Lh~A~~~~~~~~v~~Ll~-~gad~n~~d-------------~~g~tpLh~A~~~~~~~iv~~Ll~~g-~~~n~~ 186 (434)
T PHA02874 122 AELKTFLHYAIKKGDLESIKMLFE-YGADVNIED-------------DNGCYPIHIAIKHNFFDIIKLLLEKG-AYANVK 186 (434)
T ss_pred CCCccHHHHHHHCCCHHHHHHHHh-CCCCCCCcC-------------CCCCCHHHHHHHCCcHHHHHHHHHCC-CCCCCC
Confidence 467899999999999988776665 899999874 77888888888888888888888888 888887
Q ss_pred cCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCC-------------------------------CCCCccchhh
Q 006236 94 CGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDV-------------------------------YGNKPVDLIP 142 (655)
Q Consensus 94 ~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~-------------------------------~G~TPLhlAa 142 (655)
+..|.||||+|+..|+ .+++++|++.|++++.++. +|+||||+|+
T Consensus 187 -~~~g~tpL~~A~~~g~---~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~~~i~~Ll~~~~in~~d~~G~TpLh~A~ 262 (434)
T PHA02874 187 -DNNGESPLHNAAEYGD---YACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAIELLINNASINDQDIDGSTPLHHAI 262 (434)
T ss_pred -CCCCCCHHHHHHHcCC---HHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCChHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 8888888888888888 8888888888766555544 4555555554
Q ss_pred hccCCCCcChHHHHHHHHhCCCCCCcccccCCCCcccccc
Q 006236 143 VAMKSPLHSRKRAIELLLKGDHTIFEEEELVNIPVPQLSK 182 (655)
Q Consensus 143 ~~~~~~~~g~~eivelLL~~GAdin~~d~~g~tpl~~l~~ 182 (655)
. ..++.+++++|+++|++++.+|..|.+|+..+.+
T Consensus 263 ~-----~~~~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~~ 297 (434)
T PHA02874 263 N-----PPCDIDIIDILLYHKADISIKDNKGENPIDTAFK 297 (434)
T ss_pred h-----cCCcHHHHHHHHHCcCCCCCCCCCCCCHHHHHHH
Confidence 3 1236788888888888888888888888755543
No 15
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.76 E-value=4.6e-18 Score=186.32 Aligned_cols=139 Identities=17% Similarity=0.192 Sum_probs=94.9
Q ss_pred chHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCC
Q 006236 17 SSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGS 96 (655)
Q Consensus 17 ~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~ 96 (655)
.+.|+.|+..|+.+.++.+|. .|+++|..+ .+|.||||+|+..|+.+++++|+++| ++++.. +.
T Consensus 3 ~~~L~~A~~~g~~~iv~~Ll~-~g~~~n~~~-------------~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~-~~ 66 (413)
T PHA02875 3 QVALCDAILFGELDIARRLLD-IGINPNFEI-------------YDGISPIKLAMKFRDSEAIKLLMKHG-AIPDVK-YP 66 (413)
T ss_pred chHHHHHHHhCCHHHHHHHHH-CCCCCCccC-------------CCCCCHHHHHHHcCCHHHHHHHHhCC-CCcccc-CC
Confidence 578999999999999888876 899999874 67788888888888888888888877 777665 55
Q ss_pred CCChHHHHHHHcCCCChHHHHHHHHhCCCCCc-ccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccCCC
Q 006236 97 DGFTALHCAVAGGANSSFEVVKLLLSASADVN-CVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNI 175 (655)
Q Consensus 97 ~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn-~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g~t 175 (655)
++.||||+|+..|+ .++|++|++.|++++ ..+.+|.||||+|+. .++.+++++|+++|++++..+..|.+
T Consensus 67 ~~~t~L~~A~~~g~---~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~------~~~~~iv~~Ll~~gad~~~~~~~g~t 137 (413)
T PHA02875 67 DIESELHDAVEEGD---VKAVEELLDLGKFADDVFYKDGMTPLHLATI------LKKLDIMKLLIARGADPDIPNTDKFS 137 (413)
T ss_pred CcccHHHHHHHCCC---HHHHHHHHHcCCcccccccCCCCCHHHHHHH------hCCHHHHHHHHhCCCCCCCCCCCCCC
Confidence 56666666666665 666666666555442 334455666666654 55566666666666666665555555
Q ss_pred Ccccc
Q 006236 176 PVPQL 180 (655)
Q Consensus 176 pl~~l 180 (655)
|+..+
T Consensus 138 pLh~A 142 (413)
T PHA02875 138 PLHLA 142 (413)
T ss_pred HHHHH
Confidence 55433
No 16
>PHA02946 ankyin-like protein; Provisional
Probab=99.75 E-value=6.5e-18 Score=188.09 Aligned_cols=140 Identities=16% Similarity=0.210 Sum_probs=105.5
Q ss_pred chHHHHHHH-hCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccC
Q 006236 17 SSILLELSA-SDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACG 95 (655)
Q Consensus 17 ~s~LL~AAa-~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d 95 (655)
.+.||.++. .+....++++|++.|+++|.++ .+|+||||+||..|+.+++++||++| +|+|.+ |
T Consensus 38 ~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d-------------~~G~TpLh~Aa~~g~~eiv~lLL~~G-Adin~~-d 102 (446)
T PHA02946 38 YHILHAYCGIKGLDERFVEELLHRGYSPNETD-------------DDGNYPLHIASKINNNRIVAMLLTHG-ADPNAC-D 102 (446)
T ss_pred ChHHHHHHHhcCCCHHHHHHHHHCcCCCCccC-------------CCCCCHHHHHHHcCCHHHHHHHHHCc-CCCCCC-C
Confidence 455554443 3334455555556888888874 78888888888888888888888888 888887 8
Q ss_pred CCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcc-cCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccCC
Q 006236 96 SDGFTALHCAVAGGANSSFEVVKLLLSASADVNC-VDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVN 174 (655)
Q Consensus 96 ~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~-~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g~ 174 (655)
..|.||||+|+..+. ...+++++|+++|+++|. .|.+|.||||.|. .++.+++++|++.|++++.+|..|.
T Consensus 103 ~~g~TpLh~A~~~~~-~~~e~v~lLl~~Gadin~~~d~~g~tpL~aa~-------~~~~~vv~~Ll~~gad~~~~d~~G~ 174 (446)
T PHA02946 103 KQHKTPLYYLSGTDD-EVIERINLLVQYGAKINNSVDEEGCGPLLACT-------DPSERVFKKIMSIGFEARIVDKFGK 174 (446)
T ss_pred CCCCCHHHHHHHcCC-chHHHHHHHHHcCCCcccccCCCCCcHHHHHH-------CCChHHHHHHHhccccccccCCCCC
Confidence 888888888876542 236788888888888884 5788888887443 5777888888888888888888888
Q ss_pred CCccc
Q 006236 175 IPVPQ 179 (655)
Q Consensus 175 tpl~~ 179 (655)
+++..
T Consensus 175 t~Lh~ 179 (446)
T PHA02946 175 NHIHR 179 (446)
T ss_pred CHHHH
Confidence 88743
No 17
>PHA02741 hypothetical protein; Provisional
Probab=99.75 E-value=8.2e-18 Score=163.15 Aligned_cols=130 Identities=17% Similarity=0.158 Sum_probs=115.8
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHH-----hcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCC----HHHHHHHHH
Q 006236 14 YNKSSILLELSASDDISAFKREIE-----EKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGS----VAVLKYVIE 84 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~-----~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~----~evvk~LL~ 84 (655)
..|.++||.||..|+.+.++.++. ..|++++.+ |..|.||||+|+..|+ .+++++|++
T Consensus 19 ~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~-------------d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~ 85 (169)
T PHA02741 19 SEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNAT-------------DDAGQMCIHIAAEKHEAQLAAEIIDHLIE 85 (169)
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhcc-------------CCCCCcHHHHHHHcCChHHHHHHHHHHHH
Confidence 568999999999999999988764 236778777 4889999999999998 589999999
Q ss_pred cCCCccccccC-CCCChHHHHHHHcCCCChHHHHHHHHh-CCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhC
Q 006236 85 TGKVNVNRACG-SDGFTALHCAVAGGANSSFEVVKLLLS-ASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKG 162 (655)
Q Consensus 85 ~G~aDvN~~~d-~~G~TpLH~Aa~~G~~~~~eiVklLL~-~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~ 162 (655)
.| +++|.+ + ..|.||||+|+..++ .+++++|++ .|++++..|.+|.||||+|+. .++.+++++|+++
T Consensus 86 ~g-adin~~-~~~~g~TpLh~A~~~~~---~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~------~~~~~iv~~L~~~ 154 (169)
T PHA02741 86 LG-ADINAQ-EMLEGDTALHLAAHRRD---HDLAEWLCCQPGIDLHFCNADNKSPFELAID------NEDVAMMQILREI 154 (169)
T ss_pred cC-CCCCCC-CcCCCCCHHHHHHHcCC---HHHHHHHHhCCCCCCCcCCCCCCCHHHHHHH------CCCHHHHHHHHHH
Confidence 99 999998 6 489999999999999 999999998 599999999999999999987 8899999999998
Q ss_pred CCCCC
Q 006236 163 DHTIF 167 (655)
Q Consensus 163 GAdin 167 (655)
++...
T Consensus 155 ~~~~~ 159 (169)
T PHA02741 155 VATSR 159 (169)
T ss_pred HHHhc
Confidence 76543
No 18
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.75 E-value=9.8e-18 Score=185.40 Aligned_cols=145 Identities=24% Similarity=0.335 Sum_probs=114.7
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcC-------
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETG------- 86 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G------- 86 (655)
.++.|+||.|+..|+.+.++.+|. .|+++|..+ ..|.||||+|+..|+.+++++|+++|
T Consensus 33 ~~~~tpL~~A~~~g~~~iv~~Ll~-~Ga~~n~~~-------------~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~ 98 (434)
T PHA02874 33 DETTTPLIDAIRSGDAKIVELFIK-HGADINHIN-------------TKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILP 98 (434)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCC-------------CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcch
Confidence 357899999999999998887775 999999874 67788888888888888888877765
Q ss_pred ---------------CCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcC
Q 006236 87 ---------------KVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHS 151 (655)
Q Consensus 87 ---------------~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g 151 (655)
.+|++.. +..|.||||+|+..|+ .++|++|++.|++++.+|..|.||||+|+. .+
T Consensus 99 ~~~~~~~~i~~ll~~g~d~n~~-~~~g~T~Lh~A~~~~~---~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~------~~ 168 (434)
T PHA02874 99 IPCIEKDMIKTILDCGIDVNIK-DAELKTFLHYAIKKGD---LESIKMLFEYGADVNIEDDNGCYPIHIAIK------HN 168 (434)
T ss_pred hccCCHHHHHHHHHCcCCCCCC-CCCCccHHHHHHHCCC---HHHHHHHHhCCCCCCCcCCCCCCHHHHHHH------CC
Confidence 0344555 6778888888888888 888888888888888888888888888876 77
Q ss_pred hHHHHHHHHhCCCCCCcccccCCCCcccccc
Q 006236 152 RKRAIELLLKGDHTIFEEEELVNIPVPQLSK 182 (655)
Q Consensus 152 ~~eivelLL~~GAdin~~d~~g~tpl~~l~~ 182 (655)
+.+++++|+++|++++..+..|.+|+..+..
T Consensus 169 ~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~ 199 (434)
T PHA02874 169 FFDIIKLLLEKGAYANVKDNNGESPLHNAAE 199 (434)
T ss_pred cHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 7888888888888888888888887755443
No 19
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.74 E-value=1e-17 Score=194.76 Aligned_cols=147 Identities=22% Similarity=0.223 Sum_probs=119.8
Q ss_pred cCCchHHHHHHHhCCH-HHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHH----------------------
Q 006236 14 YNKSSILLELSASDDI-SAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIA---------------------- 70 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~-~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~A---------------------- 70 (655)
..|.||||.|+..|+. ..++++|+++|+++|.+ |..|.||||+|
T Consensus 210 ~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~k-------------D~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n 276 (764)
T PHA02716 210 NHLITPLHTYLITGNVCASVIKKIIELGGDMDMK-------------CVNGMSPIMTYIINIDNINPEITNIYIESLDGN 276 (764)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCC-------------CCCCCCHHHHHHHhhhccCHHHHHHHHHhcccc
Confidence 3567777777777753 34455555578887776 48899999975
Q ss_pred ---------------HHcCCHHHHHHHHHcCCCccccccCCCCChHHHHHHH--cCCCChHHHHHHHHhCCCCCcccCCC
Q 006236 71 ---------------AMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVA--GGANSSFEVVKLLLSASADVNCVDVY 133 (655)
Q Consensus 71 ---------------A~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~--~G~~~~~eiVklLL~~GADvn~~D~~ 133 (655)
+..|+.+++++||+.| +++|.+ |..|+||||+|+. .++ .+++++|++.|+++|.+|..
T Consensus 277 ~~~~~~~~L~~~i~AA~~g~leiVklLLe~G-AdIN~k-D~~G~TPLH~Aaa~~~~~---~eIVklLLe~GADIN~kD~~ 351 (764)
T PHA02716 277 KVKNIPMILHSYITLARNIDISVVYSFLQPG-VKLHYK-DSAGRTCLHQYILRHNIS---TDIIKLLHEYGNDLNEPDNI 351 (764)
T ss_pred ccccchhhhHHHHHHHHcCCHHHHHHHHhCC-Cceecc-CCCCCCHHHHHHHHhCCC---chHHHHHHHcCCCCccCCCC
Confidence 4558889999999999 999998 9999999999865 456 89999999999999999999
Q ss_pred CCCccchhhhcc--------CCCCcChHHHHHHHHhCCCCCCcccccCCCCcc
Q 006236 134 GNKPVDLIPVAM--------KSPLHSRKRAIELLLKGDHTIFEEEELVNIPVP 178 (655)
Q Consensus 134 G~TPLhlAa~~~--------~~~~~g~~eivelLL~~GAdin~~d~~g~tpl~ 178 (655)
|+||||+|+... .....++.+++++|+++|++++.+|..|.+|+.
T Consensus 352 G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh 404 (764)
T PHA02716 352 GNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLT 404 (764)
T ss_pred CCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHH
Confidence 999999986410 001246899999999999999999999999986
No 20
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.74 E-value=6.2e-18 Score=190.51 Aligned_cols=145 Identities=19% Similarity=0.235 Sum_probs=132.4
Q ss_pred ccccCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHH-cCCCc
Q 006236 11 GALYNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIE-TGKVN 89 (655)
Q Consensus 11 ~l~~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~-~G~aD 89 (655)
..+++|+|+||+||..|+.+.+..+|. .|++|+.++ .++.||||.||.+|++++|+.||+ .+...
T Consensus 268 ~~d~dg~tpLH~a~r~G~~~svd~Ll~-~Ga~I~~kn-------------~d~~spLH~AA~yg~~ntv~rLL~~~~~rl 333 (929)
T KOG0510|consen 268 DEDNDGCTPLHYAARQGGPESVDNLLG-FGASINSKN-------------KDEESPLHFAAIYGRINTVERLLQESDTRL 333 (929)
T ss_pred cccccCCchHHHHHHcCChhHHHHHHH-cCCcccccC-------------CCCCCchHHHHHcccHHHHHHHHhCcCccc
Confidence 345789999999999999999887776 999999985 899999999999999999999999 66567
Q ss_pred cccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCc---ccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCC
Q 006236 90 VNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVN---CVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTI 166 (655)
Q Consensus 90 vN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn---~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdi 166 (655)
+|.. |..|.||||.|+..|+ ..++++||..||+.+ ..|.+|+||||+|+. .|+..+|++|+.+||+|
T Consensus 334 lne~-D~~g~tpLHlaa~~gH---~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~------~g~~~av~~Li~~Ga~I 403 (929)
T KOG0510|consen 334 LNES-DLHGMTPLHLAAKSGH---DRVVQLLLNKGALFLNMSEADSDGNTALHLAAK------YGNTSAVQKLISHGADI 403 (929)
T ss_pred cccc-cccCCCchhhhhhcCH---HHHHHHHHhcChhhhcccccccCCchhhhHHHH------hccHHHHHHHHHcCCce
Confidence 7877 9999999999999999 999999999999987 569999999999997 99999999999999999
Q ss_pred CcccccCCCCccc
Q 006236 167 FEEEELVNIPVPQ 179 (655)
Q Consensus 167 n~~d~~g~tpl~~ 179 (655)
..+++.|.+.+..
T Consensus 404 ~~~n~~g~SA~~~ 416 (929)
T KOG0510|consen 404 GVKNKKGKSAFDT 416 (929)
T ss_pred eeccccccccccc
Confidence 9999888887653
No 21
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.74 E-value=1.1e-17 Score=195.20 Aligned_cols=159 Identities=19% Similarity=0.219 Sum_probs=109.8
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCC------cccc---------------cccCCccCCCCCChHHHHHHH
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFDVDEPS------FWYG---------------RRIGSKKMGFEERTPIMIAAM 72 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~d------lw~g---------------~~~~~~~~d~~G~TPLh~AA~ 72 (655)
..|.|+||.|+..|....+.++|...|+++|..+ +++. ...+.+..|..|+||||+|+.
T Consensus 305 ~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~ 384 (682)
T PHA02876 305 IKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAV 384 (682)
T ss_pred CCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHH
Confidence 3466666666666633333344444666666554 1110 111223335778888888888
Q ss_pred cCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcCh
Q 006236 73 FGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSR 152 (655)
Q Consensus 73 ~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~ 152 (655)
.|+.+++++|+++| ++++.. +..|.||||+|+..++ ...++++|++.|+++|.+|.+|+||||+|+. ...+
T Consensus 385 ~~~~~iv~~Ll~~g-ad~~~~-~~~g~T~Lh~A~~~~~--~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~-----~~~~ 455 (682)
T PHA02876 385 RNNVVIINTLLDYG-ADIEAL-SQKIGTALHFALCGTN--PYMSVKTLIDRGANVNSKNKDLSTPLHYACK-----KNCK 455 (682)
T ss_pred cCCHHHHHHHHHCC-CCcccc-CCCCCchHHHHHHcCC--HHHHHHHHHhCCCCCCcCCCCCChHHHHHHH-----hCCc
Confidence 88888888888888 888877 7788888888877655 2567888888888888888888888888875 1235
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCccccc
Q 006236 153 KRAIELLLKGDHTIFEEEELVNIPVPQLS 181 (655)
Q Consensus 153 ~eivelLL~~GAdin~~d~~g~tpl~~l~ 181 (655)
.+++++|+++|++++..|..|.+|+..+.
T Consensus 456 ~~iv~lLl~~Gad~n~~d~~g~tpl~~a~ 484 (682)
T PHA02876 456 LDVIEMLLDNGADVNAINIQNQYPLLIAL 484 (682)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 78888888888888888888888875443
No 22
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.74 E-value=3.1e-18 Score=183.22 Aligned_cols=154 Identities=24% Similarity=0.320 Sum_probs=129.9
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccc
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRA 93 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~ 93 (655)
+.|..+|--|++.|.++.|+.+| ++|++||... ....|||--||..|++++||||+++| +|++..
T Consensus 82 IegappLWaAsaAGHl~vVk~L~-~~ga~VN~tT-------------~TNStPLraACfDG~leivKyLvE~g-ad~~Ia 146 (615)
T KOG0508|consen 82 IEGAPPLWAASAAGHLEVVKLLL-RRGASVNDTT-------------RTNSTPLRAACFDGHLEIVKYLVEHG-ADPEIA 146 (615)
T ss_pred cCCCchhhHHhccCcHHHHHHHH-HhcCcccccc-------------ccCCccHHHHHhcchhHHHHHHHHcC-CCCccc
Confidence 56666766666666666655555 5899999874 55669999999999999999999999 999999
Q ss_pred cCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccC
Q 006236 94 CGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELV 173 (655)
Q Consensus 94 ~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g 173 (655)
|..|.|.||+|++.|+ .+|+++|++.|||+|.++..|+|+||.++. .|+.+|+++||.+|+.+++ |..|
T Consensus 147 -nrhGhTcLmIa~ykGh---~~I~qyLle~gADvn~ks~kGNTALH~caE------sG~vdivq~Ll~~ga~i~~-d~~G 215 (615)
T KOG0508|consen 147 -NRHGHTCLMIACYKGH---VDIAQYLLEQGADVNAKSYKGNTALHDCAE------SGSVDIVQLLLKHGAKIDV-DGHG 215 (615)
T ss_pred -ccCCCeeEEeeeccCc---hHHHHHHHHhCCCcchhcccCchHHHhhhh------cccHHHHHHHHhCCceeee-cCCC
Confidence 9999999999999999 999999999999999999999999999986 8999999999999999986 5669
Q ss_pred CCCcccccccC-ccccccccc
Q 006236 174 NIPVPQLSKDG-TEKKEYPID 193 (655)
Q Consensus 174 ~tpl~~l~~~~-~~~keypvd 193 (655)
.+|+-.++..+ ....++.++
T Consensus 216 mtPL~~Aa~tG~~~iVe~L~~ 236 (615)
T KOG0508|consen 216 MTPLLLAAVTGHTDIVERLLQ 236 (615)
T ss_pred CchHHHHhhhcchHHHHHHhc
Confidence 99985544332 344455553
No 23
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.73 E-value=2e-17 Score=196.92 Aligned_cols=140 Identities=20% Similarity=0.260 Sum_probs=116.2
Q ss_pred CchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccC
Q 006236 16 KSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACG 95 (655)
Q Consensus 16 g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d 95 (655)
..++|++||..|+.+.++.+|. .|+|+|..| .+|+||||+||..|+.+++++|+++| +|+|.+ |
T Consensus 525 ~~~~L~~Aa~~g~~~~l~~Ll~-~G~d~n~~d-------------~~G~TpLh~Aa~~g~~~~v~~Ll~~g-adin~~-d 588 (823)
T PLN03192 525 MASNLLTVASTGNAALLEELLK-AKLDPDIGD-------------SKGRTPLHIAASKGYEDCVLVLLKHA-CNVHIR-D 588 (823)
T ss_pred chhHHHHHHHcCCHHHHHHHHH-CCCCCCCCC-------------CCCCCHHHHHHHcChHHHHHHHHhcC-CCCCCc-C
Confidence 3688999999999888877775 899999884 89999999999999999999999999 999998 9
Q ss_pred CCCChHHHHHHHcCCC----------------------------ChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCC
Q 006236 96 SDGFTALHCAVAGGAN----------------------------SSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKS 147 (655)
Q Consensus 96 ~~G~TpLH~Aa~~G~~----------------------------~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~ 147 (655)
.+|+||||+|+..|+. +..+++++|+++|+|+|.+|.+|+||||+|+.
T Consensus 589 ~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~---- 664 (823)
T PLN03192 589 ANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMA---- 664 (823)
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH----
Confidence 9999999977766661 01556677778888888888888888888876
Q ss_pred CCcChHHHHHHHHhCCCCCCcccccC-CCCc
Q 006236 148 PLHSRKRAIELLLKGDHTIFEEEELV-NIPV 177 (655)
Q Consensus 148 ~~~g~~eivelLL~~GAdin~~d~~g-~tpl 177 (655)
.++.+++++|+++|++++..|.++ .++.
T Consensus 665 --~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~ 693 (823)
T PLN03192 665 --EDHVDMVRLLIMNGADVDKANTDDDFSPT 693 (823)
T ss_pred --CCcHHHHHHHHHcCCCCCCCCCCCCCCHH
Confidence 788888888888888888777666 4443
No 24
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.73 E-value=1.6e-17 Score=193.00 Aligned_cols=143 Identities=17% Similarity=0.205 Sum_probs=120.8
Q ss_pred cCCchHHHHHHHh--CCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCC--HHHHHHHHHcCCCc
Q 006236 14 YNKSSILLELSAS--DDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGS--VAVLKYVIETGKVN 89 (655)
Q Consensus 14 ~~g~s~LL~AAa~--gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~--~evvk~LL~~G~aD 89 (655)
..|.|+||.|+.. ++.+.+ ++|.++|+++|..+ .+|.||||+|+..|+ .++|++||++| +|
T Consensus 175 ~~G~TpLH~A~~n~~~~~eIV-klLLe~GADVN~kD-------------~~G~TPLH~Aa~~g~~~~eIVklLLe~G-AD 239 (764)
T PHA02716 175 KTGYGILHAYLGNMYVDIDIL-EWLCNNGVNVNLQN-------------NHLITPLHTYLITGNVCASVIKKIIELG-GD 239 (764)
T ss_pred CCCCcHHHHHHHhccCCHHHH-HHHHHcCCCCCCCC-------------CCCCCHHHHHHHcCCCCHHHHHHHHHcC-CC
Confidence 4578899876543 345554 55556999999985 899999999999995 58999999999 99
Q ss_pred cccccCCCCChHHHHHH-------------------------------------HcCCCChHHHHHHHHhCCCCCcccCC
Q 006236 90 VNRACGSDGFTALHCAV-------------------------------------AGGANSSFEVVKLLLSASADVNCVDV 132 (655)
Q Consensus 90 vN~~~d~~G~TpLH~Aa-------------------------------------~~G~~~~~eiVklLL~~GADvn~~D~ 132 (655)
+|.+ +..|.||||+|+ ..|+ .+++++|++.|+++|.+|.
T Consensus 240 VN~k-D~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~---leiVklLLe~GAdIN~kD~ 315 (764)
T PHA02716 240 MDMK-CVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNID---ISVVYSFLQPGVKLHYKDS 315 (764)
T ss_pred CCCC-CCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCC---HHHHHHHHhCCCceeccCC
Confidence 9999 899999999864 3345 8899999999999999999
Q ss_pred CCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccCCCCccc
Q 006236 133 YGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNIPVPQ 179 (655)
Q Consensus 133 ~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g~tpl~~ 179 (655)
+|+||||+|+. ...++.+++++|+++|++++.+|..|.+|+..
T Consensus 316 ~G~TPLH~Aaa----~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~ 358 (764)
T PHA02716 316 AGRTCLHQYIL----RHNISTDIIKLLHEYGNDLNEPDNIGNTVLHT 358 (764)
T ss_pred CCCCHHHHHHH----HhCCCchHHHHHHHcCCCCccCCCCCCCHHHH
Confidence 99999999764 12467899999999999999999999999864
No 25
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.73 E-value=9.3e-18 Score=159.71 Aligned_cols=135 Identities=16% Similarity=0.130 Sum_probs=108.8
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCH---HHHHHHHHcCCCcc
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSV---AVLKYVIETGKVNV 90 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~---evvk~LL~~G~aDv 90 (655)
.+|.|+||+|+..|+...+.. ..+..++... ......|.+|.||||+|+..|+. +++++|++.| +|+
T Consensus 15 ~~g~tpLh~A~~~g~~~~l~~---~~~~~~~~~~------~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~g-adi 84 (154)
T PHA02736 15 IEGENILHYLCRNGGVTDLLA---FKNAISDENR------YLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWG-ADI 84 (154)
T ss_pred CCCCCHHHHHHHhCCHHHHHH---HHHHhcchhH------HHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcC-CCc
Confidence 568999999999998543322 2222222100 00011258899999999999987 4689999999 999
Q ss_pred ccccC-CCCChHHHHHHHcCCCChHHHHHHHHh-CCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCc
Q 006236 91 NRACG-SDGFTALHCAVAGGANSSFEVVKLLLS-ASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFE 168 (655)
Q Consensus 91 N~~~d-~~G~TpLH~Aa~~G~~~~~eiVklLL~-~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~ 168 (655)
|.+ + ..|.||||+|+..|+ .+++++|+. .|++++.+|..|.||||+|+. .++.+++++|+.+|+++++
T Consensus 85 n~~-~~~~g~T~Lh~A~~~~~---~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~------~~~~~i~~~Ll~~ga~~~~ 154 (154)
T PHA02736 85 NGK-ERVFGNTPLHIAVYTQN---YELATWLCNQPGVNMEILNYAFKTPYYVACE------RHDAKMMNILRAKGAQCKV 154 (154)
T ss_pred ccc-CCCCCCcHHHHHHHhCC---HHHHHHHHhCCCCCCccccCCCCCHHHHHHH------cCCHHHHHHHHHcCCCCCC
Confidence 998 6 599999999999999 999999998 499999999999999999987 8899999999999998763
No 26
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.72 E-value=2.4e-17 Score=183.70 Aligned_cols=133 Identities=26% Similarity=0.389 Sum_probs=67.8
Q ss_pred CchHHHH-----HHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHH--HcCCHHHHHHHHHcCCC
Q 006236 16 KSSILLE-----LSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAA--MFGSVAVLKYVIETGKV 88 (655)
Q Consensus 16 g~s~LL~-----AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA--~~G~~evvk~LL~~G~a 88 (655)
+.++|+. |+..++.+.++.++ +.|++++..+ ..|.||||+|+ ..|+.+++++|++.| +
T Consensus 68 ~~t~L~~~~~~~a~~~~~~~iv~~Ll-~~ga~i~~~d-------------~~g~tpL~~A~~~~~~~~~iv~~Ll~~g-~ 132 (480)
T PHA03100 68 NSTPLHYLSNIKYNLTDVKEIVKLLL-EYGANVNAPD-------------NNGITPLLYAISKKSNSYSIVEYLLDNG-A 132 (480)
T ss_pred CcCHHHHHHHHHHHhhchHHHHHHHH-HCCCCCCCCC-------------CCCCchhhHHHhcccChHHHHHHHHHcC-C
Confidence 4455555 44444444443333 3566655542 44555555555 555555555555555 5
Q ss_pred ccccccCCCCChHHHHHHHcC--CCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCC
Q 006236 89 NVNRACGSDGFTALHCAVAGG--ANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTI 166 (655)
Q Consensus 89 DvN~~~d~~G~TpLH~Aa~~G--~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdi 166 (655)
+++.. +..|.||||+|+..| + .+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|+++
T Consensus 133 ~~~~~-~~~g~t~L~~A~~~~~~~---~~iv~~Ll~~g~din~~d~~g~tpL~~A~~------~~~~~iv~~Ll~~ga~~ 202 (480)
T PHA03100 133 NVNIK-NSDGENLLHLYLESNKID---LKILKLLIDKGVDINAKNRYGYTPLHIAVE------KGNIDVIKFLLDNGADI 202 (480)
T ss_pred CCCcc-CCCCCcHHHHHHHcCCCh---HHHHHHHHHCCCCcccccCCCCCHHHHHHH------hCCHHHHHHHHHcCCCc
Confidence 55554 455555555555555 4 555555555555555555555555555554 44445555555555554
Q ss_pred CcccccC
Q 006236 167 FEEEELV 173 (655)
Q Consensus 167 n~~d~~g 173 (655)
+..+..+
T Consensus 203 ~~~~~~~ 209 (480)
T PHA03100 203 NAGDIET 209 (480)
T ss_pred cCCCCCC
Confidence 4444444
No 27
>PHA03095 ankyrin-like protein; Provisional
Probab=99.72 E-value=4.2e-17 Score=181.10 Aligned_cols=108 Identities=26% Similarity=0.424 Sum_probs=53.8
Q ss_pred CCCChHHHHHHHcC---CHHHHHHHHHcCCCccccccCCCCChHHHHHHHcC-CCChHHHHHHHHhCCCCCcccCCCCCC
Q 006236 61 FEERTPIMIAAMFG---SVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGG-ANSSFEVVKLLLSASADVNCVDVYGNK 136 (655)
Q Consensus 61 ~~G~TPLh~AA~~G---~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G-~~~~~eiVklLL~~GADvn~~D~~G~T 136 (655)
..|.||||+|+..+ +.+++++|++.| +|+|.. +..|.||||+|+..| . .+++++|+++|+++|.+|..|.|
T Consensus 45 ~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~G-adin~~-~~~g~TpLh~A~~~~~~---~~iv~lLl~~ga~in~~~~~g~t 119 (471)
T PHA03095 45 EYGKTPLHLYLHYSSEKVKDIVRLLLEAG-ADVNAP-ERCGFTPLHLYLYNATT---LDVIKLLIKAGADVNAKDKVGRT 119 (471)
T ss_pred CCCCCHHHHHHHhcCCChHHHHHHHHHCC-CCCCCC-CCCCCCHHHHHHHcCCc---HHHHHHHHHcCCCCCCCCCCCCC
Confidence 44555555555544 455555555555 555544 445555555555554 3 45555555555555555555555
Q ss_pred ccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccCCCCc
Q 006236 137 PVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNIPV 177 (655)
Q Consensus 137 PLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g~tpl 177 (655)
|||+|+. ...++.+++++|+++|++++..|..|.+|+
T Consensus 120 pLh~a~~----~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL 156 (471)
T PHA03095 120 PLHVYLS----GFNINPKVIRLLLRKGADVNALDLYGMTPL 156 (471)
T ss_pred HHHHHhh----CCcCCHHHHHHHHHcCCCCCccCCCCCCHH
Confidence 5555442 113344555555555555555555555554
No 28
>PHA02798 ankyrin-like protein; Provisional
Probab=99.72 E-value=2.9e-17 Score=184.55 Aligned_cols=116 Identities=22% Similarity=0.298 Sum_probs=86.3
Q ss_pred CCCCChHHHHHHHcCC---HHHHHHHHHcCCCccccccCCCCChHHHHHHHcCC-CChHHHHHHHHhCCC----------
Q 006236 60 GFEERTPIMIAAMFGS---VAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGA-NSSFEVVKLLLSASA---------- 125 (655)
Q Consensus 60 d~~G~TPLh~AA~~G~---~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~-~~~~eiVklLL~~GA---------- 125 (655)
|.+|.||||+|+..++ .+++++|++.| +|+|...+..|.||||+++..+. ....+++++|+++|+
T Consensus 142 d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~g-adin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~ 220 (489)
T PHA02798 142 DKDGFTMLQVYLQSNHHIDIEIIKLLLEKG-VDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHK 220 (489)
T ss_pred CCCCCcHHHHHHHcCCcchHHHHHHHHHhC-CCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCcccc
Confidence 4777777777777776 77777777777 77776644567777777765431 112667777776665
Q ss_pred -----------------------------CCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccCCCC
Q 006236 126 -----------------------------DVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNIP 176 (655)
Q Consensus 126 -----------------------------Dvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g~tp 176 (655)
|+|.+|..|.||||+|+. .++.+++++||++|||++..+..|.||
T Consensus 221 ~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~------~~~~~~v~~LL~~GAdin~~d~~G~Tp 294 (489)
T PHA02798 221 KKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVS------HNNRKIFEYLLQLGGDINIITELGNTC 294 (489)
T ss_pred chHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHH------cCcHHHHHHHHHcCCcccccCCCCCcH
Confidence 444567789999999986 789999999999999999999999999
Q ss_pred cccccc
Q 006236 177 VPQLSK 182 (655)
Q Consensus 177 l~~l~~ 182 (655)
+..+..
T Consensus 295 L~~A~~ 300 (489)
T PHA02798 295 LFTAFE 300 (489)
T ss_pred HHHHHH
Confidence 865544
No 29
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.71 E-value=2.7e-17 Score=156.81 Aligned_cols=144 Identities=24% Similarity=0.279 Sum_probs=124.5
Q ss_pred CCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccc
Q 006236 15 NKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRAC 94 (655)
Q Consensus 15 ~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~ 94 (655)
+-.-.++.||..+.+..|+++|.+..-.||.+ |.+|.||||-|+++|+.+||+.||..| |+++.+
T Consensus 62 dp~rl~lwaae~nrl~eV~~lL~e~an~vNtr-------------D~D~YTpLHRAaYn~h~div~~ll~~g-An~~a~- 126 (228)
T KOG0512|consen 62 DPIRLLLWAAEKNRLTEVQRLLSEKANHVNTR-------------DEDEYTPLHRAAYNGHLDIVHELLLSG-ANKEAK- 126 (228)
T ss_pred CHHHHHHHHHhhccHHHHHHHHHhcccccccc-------------ccccccHHHHHHhcCchHHHHHHHHcc-CCcccc-
Confidence 34456788888999999999999777778988 499999999999999999999999999 999999
Q ss_pred CCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHh-CCCCCCcccccC
Q 006236 95 GSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLK-GDHTIFEEEELV 173 (655)
Q Consensus 95 d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~-~GAdin~~d~~g 173 (655)
...||||||-||.-.+ .+++-+||.+|+|||+......||||+|+. ..+....+++||. .+++...++..+
T Consensus 127 T~~GWTPLhSAckWnN---~~va~~LLqhgaDVnA~t~g~ltpLhlaa~-----~rn~r~t~~~Ll~dryi~pg~~nn~e 198 (228)
T KOG0512|consen 127 TNEGWTPLHSACKWNN---FEVAGRLLQHGADVNAQTKGLLTPLHLAAG-----NRNSRDTLELLLHDRYIHPGLKNNLE 198 (228)
T ss_pred cccCccchhhhhcccc---hhHHHHHHhccCcccccccccchhhHHhhc-----ccchHHHHHHHhhccccChhhhcCcc
Confidence 8999999999999999 999999999999999999999999999986 3455667776654 678888877777
Q ss_pred CCCccccc
Q 006236 174 NIPVPQLS 181 (655)
Q Consensus 174 ~tpl~~l~ 181 (655)
++++.++.
T Consensus 199 eta~~iAR 206 (228)
T KOG0512|consen 199 ETAFDIAR 206 (228)
T ss_pred chHHHHHH
Confidence 77765443
No 30
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.71 E-value=6.3e-17 Score=182.11 Aligned_cols=147 Identities=19% Similarity=0.285 Sum_probs=120.4
Q ss_pred cCCchHHHHHHHhCC-HHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcC------CHHHHHHHHHcC
Q 006236 14 YNKSSILLELSASDD-ISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFG------SVAVLKYVIETG 86 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd-~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G------~~evvk~LL~~G 86 (655)
..|.++|+++++.++ ...++++|.++|+|||..+ .+.||||.|+..+ +.+++++||++|
T Consensus 33 ~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~--------------~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~G 98 (494)
T PHA02989 33 YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG--------------YIETPLCAVLRNREITSNKIKKIVKLLLKFG 98 (494)
T ss_pred cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC--------------CCCCcHHHHHhccCcchhhHHHHHHHHHHCC
Confidence 457888887776654 4556666677999999863 4689999998754 468999999999
Q ss_pred CCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCC-cccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCC
Q 006236 87 KVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADV-NCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHT 165 (655)
Q Consensus 87 ~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADv-n~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAd 165 (655)
+|+|.+ +..|.||||+|+..+..+..+++++|+++|||+ +.+|..|.||||+|+. ...++.+++++|+++|++
T Consensus 99 -adin~~-d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~----~~~~~~~iv~~Ll~~Gad 172 (494)
T PHA02989 99 -ADINLK-TFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLE----SFSVKKDVIKILLSFGVN 172 (494)
T ss_pred -CCCCCC-CCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHH----hccCCHHHHHHHHHcCCC
Confidence 999998 899999999988764333489999999999999 8999999999999875 234688999999999999
Q ss_pred CCc-ccccCCCCcccc
Q 006236 166 IFE-EEELVNIPVPQL 180 (655)
Q Consensus 166 in~-~d~~g~tpl~~l 180 (655)
++. .+..|.+|+...
T Consensus 173 i~~~~~~~g~tpL~~a 188 (494)
T PHA02989 173 LFEKTSLYGLTPMNIY 188 (494)
T ss_pred ccccccccCCChHHHH
Confidence 998 577888887543
No 31
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.70 E-value=4.8e-17 Score=181.24 Aligned_cols=145 Identities=20% Similarity=0.306 Sum_probs=132.8
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHH-----HHHcCCHHHHHHHHHcCCC
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMI-----AAMFGSVAVLKYVIETGKV 88 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~-----AA~~G~~evvk~LL~~G~a 88 (655)
..+.++||.|+..++.+.++.+|. .|+++|..+ ..|.||||+ |+..++.+++++|++.| +
T Consensus 33 ~~~~t~L~~A~~~~~~~ivk~Ll~-~g~~~~~~~-------------~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~g-a 97 (480)
T PHA03100 33 KKPVLPLYLAKEARNIDVVKILLD-NGADINSST-------------KNNSTPLHYLSNIKYNLTDVKEIVKLLLEYG-A 97 (480)
T ss_pred cccchhhhhhhccCCHHHHHHHHH-cCCCCCCcc-------------ccCcCHHHHHHHHHHHhhchHHHHHHHHHCC-C
Confidence 457899999999999888887776 899999874 789999999 99999999999999999 9
Q ss_pred ccccccCCCCChHHHHHH--HcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcC--hHHHHHHHHhCCC
Q 006236 89 NVNRACGSDGFTALHCAV--AGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHS--RKRAIELLLKGDH 164 (655)
Q Consensus 89 DvN~~~d~~G~TpLH~Aa--~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g--~~eivelLL~~GA 164 (655)
+++.. +..|.||||+|+ ..|+ .+++++|+++|++++..|..|.||||+|+. .+ +.+++++|+++|+
T Consensus 98 ~i~~~-d~~g~tpL~~A~~~~~~~---~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~------~~~~~~~iv~~Ll~~g~ 167 (480)
T PHA03100 98 NVNAP-DNNGITPLLYAISKKSNS---YSIVEYLLDNGANVNIKNSDGENLLHLYLE------SNKIDLKILKLLIDKGV 167 (480)
T ss_pred CCCCC-CCCCCchhhHHHhcccCh---HHHHHHHHHcCCCCCccCCCCCcHHHHHHH------cCCChHHHHHHHHHCCC
Confidence 99988 999999999999 9898 999999999999999999999999999987 77 8999999999999
Q ss_pred CCCcccccCCCCccccccc
Q 006236 165 TIFEEEELVNIPVPQLSKD 183 (655)
Q Consensus 165 din~~d~~g~tpl~~l~~~ 183 (655)
+++..+..|.+|+..+...
T Consensus 168 din~~d~~g~tpL~~A~~~ 186 (480)
T PHA03100 168 DINAKNRYGYTPLHIAVEK 186 (480)
T ss_pred CcccccCCCCCHHHHHHHh
Confidence 9999999999998665443
No 32
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.70 E-value=9.5e-17 Score=169.48 Aligned_cols=128 Identities=20% Similarity=0.181 Sum_probs=105.8
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccc
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRA 93 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~ 93 (655)
..+.+++|++|+..+...+.++|.++|+++|..+ ...+..|.||||+|+..++.+++++|+++| +|+|..
T Consensus 30 ~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~---------~~sd~~g~TpLh~Aa~~~~~eivklLL~~G-ADVN~~ 99 (300)
T PHA02884 30 KICIANILYSSIKFHYTDIIDAILKLGADPEAPF---------PLSENSKTNPLIYAIDCDNDDAAKLLIRYG-ADVNRY 99 (300)
T ss_pred cCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccC---------cccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCcCcc
Confidence 4577888888887655555556666999999863 001368999999999999999999999999 999986
Q ss_pred cCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHH
Q 006236 94 CGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLL 160 (655)
Q Consensus 94 ~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL 160 (655)
.+..|.||||+|+..|+ .+++++|++.|++++.+|.+|.||||+|+. .++.+++.++.
T Consensus 100 ~~~~g~TpLh~Aa~~~~---~eivklLL~~GAdin~kd~~G~TpL~~A~~------~~~~~~~~~~~ 157 (300)
T PHA02884 100 AEEAKITPLYISVLHGC---LKCLEILLSYGADINIQTNDMVTPIELALM------ICNNFLAFMIC 157 (300)
T ss_pred cCCCCCCHHHHHHHcCC---HHHHHHHHHCCCCCCCCCCCCCCHHHHHHH------hCChhHHHHhc
Confidence 35689999999999999 999999999999999999999999999986 45555554443
No 33
>PHA02946 ankyin-like protein; Provisional
Probab=99.70 E-value=9.5e-17 Score=178.78 Aligned_cols=143 Identities=15% Similarity=0.191 Sum_probs=123.4
Q ss_pred chHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcC--CHHHHHHHHHcCCCcccccc
Q 006236 17 SSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFG--SVAVLKYVIETGKVNVNRAC 94 (655)
Q Consensus 17 ~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G--~~evvk~LL~~G~aDvN~~~ 94 (655)
.|+||.||..|+.+.++.||. +|+++|.++ .+|+||||+|+..+ ..+++++|+++| +++|...
T Consensus 73 ~TpLh~Aa~~g~~eiv~lLL~-~GAdin~~d-------------~~g~TpLh~A~~~~~~~~e~v~lLl~~G-adin~~~ 137 (446)
T PHA02946 73 NYPLHIASKINNNRIVAMLLT-HGADPNACD-------------KQHKTPLYYLSGTDDEVIERINLLVQYG-AKINNSV 137 (446)
T ss_pred CCHHHHHHHcCCHHHHHHHHH-CcCCCCCCC-------------CCCCCHHHHHHHcCCchHHHHHHHHHcC-CCccccc
Confidence 588999998888877766665 899999884 89999999999876 489999999999 9999644
Q ss_pred CCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccCC
Q 006236 95 GSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVN 174 (655)
Q Consensus 95 d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g~ 174 (655)
+..|.|||| |+..|+ .+++++|++.|++++.+|..|+||||+|+. ...+..+++++|+++|++++.+|.+|.
T Consensus 138 d~~g~tpL~-aa~~~~---~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~----~~~~~~~~v~~Ll~~Gadin~~d~~G~ 209 (446)
T PHA02946 138 DEEGCGPLL-ACTDPS---ERVFKKIMSIGFEARIVDKFGKNHIHRHLM----SDNPKASTISWMMKLGISPSKPDHDGN 209 (446)
T ss_pred CCCCCcHHH-HHHCCC---hHHHHHHHhccccccccCCCCCCHHHHHHH----hcCCCHHHHHHHHHcCCCCcccCCCCC
Confidence 889999998 556677 899999999999999999999999999875 234567899999999999999999999
Q ss_pred CCcccccc
Q 006236 175 IPVPQLSK 182 (655)
Q Consensus 175 tpl~~l~~ 182 (655)
||+..+..
T Consensus 210 TpLH~Aa~ 217 (446)
T PHA02946 210 TPLHIVCS 217 (446)
T ss_pred CHHHHHHH
Confidence 99976654
No 34
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.70 E-value=8.1e-17 Score=181.23 Aligned_cols=148 Identities=18% Similarity=0.190 Sum_probs=106.5
Q ss_pred CCchHHHHHHHh---CCHHHHHHHHHhcCCCC-CCCCcccccccCCccCCCCCChHHHHHHHc--CCHHHHHHHHHcCCC
Q 006236 15 NKSSILLELSAS---DDISAFKREIEEKGFDV-DEPSFWYGRRIGSKKMGFEERTPIMIAAMF--GSVAVLKYVIETGKV 88 (655)
Q Consensus 15 ~g~s~LL~AAa~---gd~~~vk~LL~~~GadI-n~~dlw~g~~~~~~~~d~~G~TPLh~AA~~--G~~evvk~LL~~G~a 88 (655)
.|.|||+.|+.. ++.+ +.++|.++|+|+ +.. |..|+||||+|+.. ++.+++++|+++| +
T Consensus 107 ~g~tpL~~a~~~~~~~~~e-iv~~Ll~~Gadin~~~-------------d~~g~tpLh~a~~~~~~~~~iv~~Ll~~G-a 171 (494)
T PHA02989 107 NGVSPIVCFIYNSNINNCD-MLRFLLSKGINVNDVK-------------NSRGYNLLHMYLESFSVKKDVIKILLSFG-V 171 (494)
T ss_pred CCCcHHHHHHHhcccCcHH-HHHHHHHCCCCccccc-------------CCCCCCHHHHHHHhccCCHHHHHHHHHcC-C
Confidence 456666655433 2333 333333466666 444 47888888888754 5788888888888 8
Q ss_pred ccccccCCCCChHHHHHHHcCC-CChHHHHHHHHhCCCCCcc--------------------------------------
Q 006236 89 NVNRACGSDGFTALHCAVAGGA-NSSFEVVKLLLSASADVNC-------------------------------------- 129 (655)
Q Consensus 89 DvN~~~d~~G~TpLH~Aa~~G~-~~~~eiVklLL~~GADvn~-------------------------------------- 129 (655)
|++...+..|.||||+|+..+. ....+++++|+++|+++|.
T Consensus 172 di~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~ 251 (494)
T PHA02989 172 NLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINK 251 (494)
T ss_pred CccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCC
Confidence 8887337788888888876541 1127888888888876654
Q ss_pred cCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccCCCCccccccc
Q 006236 130 VDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNIPVPQLSKD 183 (655)
Q Consensus 130 ~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g~tpl~~l~~~ 183 (655)
+|..|.||||+|+. .++.+++++||++|+|++.+|..|.||+..+...
T Consensus 252 ~d~~G~TpL~~Aa~------~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~ 299 (494)
T PHA02989 252 KDKKGFNPLLISAK------VDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKH 299 (494)
T ss_pred CCCCCCCHHHHHHH------hcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 45568899999886 7889999999999999999999999998655443
No 35
>PHA03095 ankyrin-like protein; Provisional
Probab=99.70 E-value=9.6e-17 Score=178.24 Aligned_cols=146 Identities=23% Similarity=0.325 Sum_probs=126.4
Q ss_pred cCCchHHHHHHHhC--CHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcC-CHHHHHHHHHcCCCcc
Q 006236 14 YNKSSILLELSASD--DISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFG-SVAVLKYVIETGKVNV 90 (655)
Q Consensus 14 ~~g~s~LL~AAa~g--d~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G-~~evvk~LL~~G~aDv 90 (655)
..|.|+||.|+..+ +...+.++|.+.|+++|..+ ..|.||||+|+..| ..+++++|++.| +++
T Consensus 45 ~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~-------------~~g~TpLh~A~~~~~~~~iv~lLl~~g-a~i 110 (471)
T PHA03095 45 EYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPE-------------RCGFTPLHLYLYNATTLDVIKLLIKAG-ADV 110 (471)
T ss_pred CCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCC-------------CCCCCHHHHHHHcCCcHHHHHHHHHcC-CCC
Confidence 45789999999987 45555555666999999985 79999999999999 599999999999 999
Q ss_pred ccccCCCCChHHHHHHH--cCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCc
Q 006236 91 NRACGSDGFTALHCAVA--GGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFE 168 (655)
Q Consensus 91 N~~~d~~G~TpLH~Aa~--~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~ 168 (655)
|.. +..|.||||+|+. .++ .+++++|++.|++++..|..|.||||+|+. ......+++++|+++|++++.
T Consensus 111 n~~-~~~g~tpLh~a~~~~~~~---~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~----~~~~~~~iv~~Ll~~g~~~~~ 182 (471)
T PHA03095 111 NAK-DKVGRTPLHVYLSGFNIN---PKVIRLLLRKGADVNALDLYGMTPLAVLLK----SRNANVELLRLLIDAGADVYA 182 (471)
T ss_pred CCC-CCCCCCHHHHHhhCCcCC---HHHHHHHHHcCCCCCccCCCCCCHHHHHHH----cCCCCHHHHHHHHHcCCCCcc
Confidence 998 8999999999994 456 899999999999999999999999999876 124578999999999999999
Q ss_pred ccccCCCCccccc
Q 006236 169 EEELVNIPVPQLS 181 (655)
Q Consensus 169 ~d~~g~tpl~~l~ 181 (655)
.|..|.++++.+.
T Consensus 183 ~d~~g~t~Lh~~~ 195 (471)
T PHA03095 183 VDDRFRSLLHHHL 195 (471)
T ss_pred cCCCCCCHHHHHH
Confidence 8889999885443
No 36
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.70 E-value=1e-16 Score=187.02 Aligned_cols=145 Identities=23% Similarity=0.258 Sum_probs=125.3
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcC-CHHHHHHHHHcCCCcccc
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFG-SVAVLKYVIETGKVNVNR 92 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G-~~evvk~LL~~G~aDvN~ 92 (655)
..|.|+||+|+..++...++.+|.+.|+++|..+ ..|.||||+|+..| ..+++++|+..| +++|.
T Consensus 271 ~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d-------------~~g~TpLh~Aa~~g~~~~~v~~Ll~~g-adin~ 336 (682)
T PHA02876 271 DCKNTPLHHASQAPSLSRLVPKLLERGADVNAKN-------------IKGETPLYLMAKNGYDTENIRTLIMLG-ADVNA 336 (682)
T ss_pred CCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcC-------------CCCCCHHHHHHHhCCCHHHHHHHHHcC-CCCCC
Confidence 4588999999999998888888888999999874 78999999999998 588999999998 99998
Q ss_pred ccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCccccc
Q 006236 93 ACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEEL 172 (655)
Q Consensus 93 ~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~ 172 (655)
. +..|.||||+|+..+. ..+++++|++.|+++|.+|..|.||||+|+. .++.+++++|+++|++++..+..
T Consensus 337 ~-d~~g~TpLh~A~~~~~--~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~------~~~~~iv~~Ll~~gad~~~~~~~ 407 (682)
T PHA02876 337 A-DRLYITPLHQASTLDR--NKDIVITLLELGANVNARDYCDKTPIHYAAV------RNNVVIINTLLDYGADIEALSQK 407 (682)
T ss_pred c-ccCCCcHHHHHHHhCC--cHHHHHHHHHcCCCCccCCCCCCCHHHHHHH------cCCHHHHHHHHHCCCCccccCCC
Confidence 8 8899999999988543 2788999999999999999999999999986 88899999999999999988888
Q ss_pred CCCCccccc
Q 006236 173 VNIPVPQLS 181 (655)
Q Consensus 173 g~tpl~~l~ 181 (655)
|.+++..+.
T Consensus 408 g~T~Lh~A~ 416 (682)
T PHA02876 408 IGTALHFAL 416 (682)
T ss_pred CCchHHHHH
Confidence 888875543
No 37
>PHA02795 ankyrin-like protein; Provisional
Probab=99.69 E-value=8.5e-17 Score=176.59 Aligned_cols=145 Identities=12% Similarity=0.073 Sum_probs=123.7
Q ss_pred cCCchHHHHHHH--hCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccc
Q 006236 14 YNKSSILLELSA--SDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVN 91 (655)
Q Consensus 14 ~~g~s~LL~AAa--~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN 91 (655)
..+.++||.++. .|+.+.++.|| .+|+|||.. ++.||||+|+..++.+++++|+++| ++.+
T Consensus 114 ~~~~~~L~~~~~n~~n~~eiV~~LI-~~GADIn~~---------------~~~t~lh~A~~~~~~eIVk~Lls~G-a~~~ 176 (437)
T PHA02795 114 NSVQDLLLYYLSNAYVEIDIVDFMV-DHGAVIYKI---------------ECLNAYFRGICKKESSVVEFILNCG-IPDE 176 (437)
T ss_pred ccccHHHHHHHHhcCCCHHHHHHHH-HCCCCCCCC---------------CCCCHHHHHHHcCcHHHHHHHHhcC-Cccc
Confidence 346788888888 66666665555 599999975 3589999999999999999999999 7543
Q ss_pred cccC-----CCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCC
Q 006236 92 RACG-----SDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTI 166 (655)
Q Consensus 92 ~~~d-----~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdi 166 (655)
...+ ..+.|++|.|+..++ .+++++|+++|||+|.+|..|.||||+|+. .++.+++++|+++|+++
T Consensus 177 n~~~~~l~~~~~~t~l~~a~~~~~---~eIve~LIs~GADIN~kD~~G~TpLh~Aa~------~g~~eiVelLL~~GAdI 247 (437)
T PHA02795 177 NDVKLDLYKIIQYTRGFLVDEPTV---LEIYKLCIPYIEDINQLDAGGRTLLYRAIY------AGYIDLVSWLLENGANV 247 (437)
T ss_pred ccccchhhhhhccchhHHHHhcCH---HHHHHHHHhCcCCcCcCCCCCCCHHHHHHH------cCCHHHHHHHHHCCCCC
Confidence 2211 347899999999998 999999999999999999999999999997 89999999999999999
Q ss_pred CcccccCCCCcccccccC
Q 006236 167 FEEEELVNIPVPQLSKDG 184 (655)
Q Consensus 167 n~~d~~g~tpl~~l~~~~ 184 (655)
+.+|..|.||+..+...+
T Consensus 248 N~~d~~G~TpLh~Aa~~g 265 (437)
T PHA02795 248 NAVMSNGYTCLDVAVDRG 265 (437)
T ss_pred CCcCCCCCCHHHHHHHcC
Confidence 999999999997665544
No 38
>PHA02798 ankyrin-like protein; Provisional
Probab=99.69 E-value=1.2e-16 Score=179.49 Aligned_cols=145 Identities=21% Similarity=0.260 Sum_probs=119.7
Q ss_pred cCCchHHHHHHHh-CCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHc-----CCHHHHHHHHHcCC
Q 006236 14 YNKSSILLELSAS-DDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMF-----GSVAVLKYVIETGK 87 (655)
Q Consensus 14 ~~g~s~LL~AAa~-gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~-----G~~evvk~LL~~G~ 87 (655)
..+.++++.+... +....++++|.++|+++|..+ .+|.||||+|+.. +..+++++|+++|
T Consensus 34 ~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d-------------~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~G- 99 (489)
T PHA02798 34 VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLD-------------NEYSTPLCTILSNIKDYKHMLDIVKILIENG- 99 (489)
T ss_pred cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCC-------------CCCCChHHHHHHhHHhHHhHHHHHHHHHHCC-
Confidence 3456766544443 334456666667999999984 8999999999864 6789999999999
Q ss_pred CccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcCh---HHHHHHHHhCCC
Q 006236 88 VNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSR---KRAIELLLKGDH 164 (655)
Q Consensus 88 aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~---~eivelLL~~GA 164 (655)
+|+|.. +..|.||||+|+..+..+..+++++|+++|||++.+|.+|.||||+|+. .++ .+++++|+++|+
T Consensus 100 adiN~~-d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~------~~~~~~~~vv~~Ll~~ga 172 (489)
T PHA02798 100 ADINKK-NSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQ------SNHHIDIEIIKLLLEKGV 172 (489)
T ss_pred CCCCCC-CCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHH------cCCcchHHHHHHHHHhCC
Confidence 999999 9999999999999875445999999999999999999999999999986 454 899999999999
Q ss_pred CCCccc-ccCCCCccc
Q 006236 165 TIFEEE-ELVNIPVPQ 179 (655)
Q Consensus 165 din~~d-~~g~tpl~~ 179 (655)
+++..+ ..+.+++..
T Consensus 173 din~~~~~~~~t~Lh~ 188 (489)
T PHA02798 173 DINTHNNKEKYDTLHC 188 (489)
T ss_pred CcccccCcCCCcHHHH
Confidence 999875 456666643
No 39
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.68 E-value=5.9e-17 Score=159.45 Aligned_cols=155 Identities=21% Similarity=0.255 Sum_probs=125.6
Q ss_pred CCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcc------------------cccccCCccCCCCCChHHHHHHHcCCH
Q 006236 15 NKSSILLELSASDDISAFKREIEEKGFDVDEPSFW------------------YGRRIGSKKMGFEERTPIMIAAMFGSV 76 (655)
Q Consensus 15 ~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw------------------~g~~~~~~~~d~~G~TPLh~AA~~G~~ 76 (655)
+|.+.+|.++-++....+...| .+|...|+.+++ .-.+.-.+.-|..|.|||+||+.+|++
T Consensus 95 ~g~~~~~v~ap~~s~~k~sttl-tN~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n~VN~~De~GfTpLiWAaa~G~i 173 (296)
T KOG0502|consen 95 EGWSALLVAAPCGSVDKVSTTL-TNGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNNKVNACDEFGFTPLIWAAAKGHI 173 (296)
T ss_pred hhhhhhhhcCCCCCcceeeeee-cccccCCccccccCChhhHHHHHHHHHHHHHHhhccccCccccCchHhHHHHhcCch
Confidence 4556666666666444433333 355655555411 001122344479999999999999999
Q ss_pred HHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHH
Q 006236 77 AVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAI 156 (655)
Q Consensus 77 evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eiv 156 (655)
.+|++||+.| +|++.. ++...++|.+|+.+|. .+||++||..+.|+|.-|.+|-|||-+|++ .++.+|+
T Consensus 174 ~vV~fLL~~G-Adp~~l-gk~resALsLAt~ggy---tdiV~lLL~r~vdVNvyDwNGgTpLlyAvr------gnhvkcv 242 (296)
T KOG0502|consen 174 PVVQFLLNSG-ADPDAL-GKYRESALSLATRGGY---TDIVELLLTREVDVNVYDWNGGTPLLYAVR------GNHVKCV 242 (296)
T ss_pred HHHHHHHHcC-CChhhh-hhhhhhhHhHHhcCCh---HHHHHHHHhcCCCcceeccCCCceeeeeec------CChHHHH
Confidence 9999999999 999998 8999999999999999 999999999999999999999999999987 8999999
Q ss_pred HHHHhCCCCCCcccccCCCCccccc
Q 006236 157 ELLLKGDHTIFEEEELVNIPVPQLS 181 (655)
Q Consensus 157 elLL~~GAdin~~d~~g~tpl~~l~ 181 (655)
+.||..||+++..+..|..+...+.
T Consensus 243 e~Ll~sGAd~t~e~dsGy~~mdlAV 267 (296)
T KOG0502|consen 243 ESLLNSGADVTQEDDSGYWIMDLAV 267 (296)
T ss_pred HHHHhcCCCcccccccCCcHHHHHH
Confidence 9999999999999999988775443
No 40
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.67 E-value=1.2e-16 Score=171.23 Aligned_cols=152 Identities=18% Similarity=0.211 Sum_probs=135.9
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccc
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRA 93 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~ 93 (655)
.+|.+||+.||.+|..+.+..+|+..++++...+ ..+.+ -...+|-+||-.|+..|++++||.|+.+| ++||..
T Consensus 40 ~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~G---sV~FD--ge~IegappLWaAsaAGHl~vVk~L~~~g-a~VN~t 113 (615)
T KOG0508|consen 40 QNGGTPLLIAARNGHADVVEYLLEHCRASPEQGG---SVRFD--GETIEGAPPLWAASAAGHLEVVKLLLRRG-ASVNDT 113 (615)
T ss_pred cCCCCceeeehhcCcHHHHHHHHHHhcCCccCCc---eEEeC--CcccCCCchhhHHhccCcHHHHHHHHHhc-Cccccc
Confidence 4678999999999999999999998999988765 11111 12367899999999999999999999999 999988
Q ss_pred cCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccC
Q 006236 94 CGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELV 173 (655)
Q Consensus 94 ~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g 173 (655)
.....|||--||.-|+ .++||+|+++|+|+++.|..|.|.||+|+. .|+.+|+++|++.|+|+|.++..|
T Consensus 114 -T~TNStPLraACfDG~---leivKyLvE~gad~~IanrhGhTcLmIa~y------kGh~~I~qyLle~gADvn~ks~kG 183 (615)
T KOG0508|consen 114 -TRTNSTPLRAACFDGH---LEIVKYLVEHGADPEIANRHGHTCLMIACY------KGHVDIAQYLLEQGADVNAKSYKG 183 (615)
T ss_pred -cccCCccHHHHHhcch---hHHHHHHHHcCCCCcccccCCCeeEEeeec------cCchHHHHHHHHhCCCcchhcccC
Confidence 7788899999999999 999999999999999999999999999975 999999999999999999999999
Q ss_pred CCCccccc
Q 006236 174 NIPVPQLS 181 (655)
Q Consensus 174 ~tpl~~l~ 181 (655)
.|.++..+
T Consensus 184 NTALH~ca 191 (615)
T KOG0508|consen 184 NTALHDCA 191 (615)
T ss_pred chHHHhhh
Confidence 99985444
No 41
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.67 E-value=8.2e-17 Score=168.08 Aligned_cols=145 Identities=26% Similarity=0.293 Sum_probs=130.6
Q ss_pred cccCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHc-----CCHHHHHHHHHcC
Q 006236 12 ALYNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMF-----GSVAVLKYVIETG 86 (655)
Q Consensus 12 l~~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~-----G~~evvk~LL~~G 86 (655)
.+.+|+|.||+++...|++.|..||...-.+||..+ .-|.||+|+|+.. .++.+|..|...|
T Consensus 264 aDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qN-------------rAGYtpiMLaALA~lk~~~d~~vV~~LF~mg 330 (452)
T KOG0514|consen 264 ADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQN-------------RAGYTPVMLAALAKLKQPADRTVVERLFKMG 330 (452)
T ss_pred hcCCCCeeeeeeecccchHHHHHHhccCcccccccc-------------cccccHHHHHHHHhhcchhhHHHHHHHHhcc
Confidence 456799999999999999999999986667888885 8899999999964 4678999999998
Q ss_pred CCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHh-CCCC
Q 006236 87 KVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLK-GDHT 165 (655)
Q Consensus 87 ~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~-~GAd 165 (655)
|||.+-...|.|+|++|+..|+ .++|+.||..|||||.+|.+|.|+|++|+. .|+++|+++||. -++|
T Consensus 331 --nVNaKAsQ~gQTALMLAVSHGr---~d~vk~LLacgAdVNiQDdDGSTALMCA~E------HGhkEivklLLA~p~cd 399 (452)
T KOG0514|consen 331 --DVNAKASQHGQTALMLAVSHGR---VDMVKALLACGADVNIQDDDGSTALMCAAE------HGHKEIVKLLLAVPSCD 399 (452)
T ss_pred --CcchhhhhhcchhhhhhhhcCc---HHHHHHHHHccCCCccccCCccHHHhhhhh------hChHHHHHHHhccCccc
Confidence 8887756899999999999999 999999999999999999999999999986 999999999997 5799
Q ss_pred CCcccccCCCCcccc
Q 006236 166 IFEEEELVNIPVPQL 180 (655)
Q Consensus 166 in~~d~~g~tpl~~l 180 (655)
+.+.|.+|.|.+.++
T Consensus 400 ~sLtD~DgSTAl~IA 414 (452)
T KOG0514|consen 400 ISLTDVDGSTALSIA 414 (452)
T ss_pred ceeecCCCchhhhhH
Confidence 999999999987544
No 42
>PHA02917 ankyrin-like protein; Provisional
Probab=99.66 E-value=3.8e-16 Score=181.33 Aligned_cols=154 Identities=14% Similarity=0.166 Sum_probs=118.7
Q ss_pred ccCCchHHHHHHHh---CCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChH-----------------------
Q 006236 13 LYNKSSILLELSAS---DDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTP----------------------- 66 (655)
Q Consensus 13 ~~~g~s~LL~AAa~---gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TP----------------------- 66 (655)
+.+|.|+||+|+.. |+.+.++.||. .|++++..+ .+|+||
T Consensus 29 d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~-~ga~v~~~~-------------~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~ 94 (661)
T PHA02917 29 NQFKNNALHAYLFNEHCNNVEVVKLLLD-SGTNPLHKN-------------WRQLTPLEEYTNSRHVKVNKDIAMALLEA 94 (661)
T ss_pred CCCCCcHHHHHHHhhhcCcHHHHHHHHH-CCCCccccC-------------CCCCCHHHHHHHcCChhHHHHHHHHHHhc
Confidence 35688999987444 66666666664 999999875 334444
Q ss_pred ------------HHHHHHcCCHHHHHHHHHcCCCccccccCCCCChHHHHHH--HcCCCChHHHHHHHHhCCCCCcccCC
Q 006236 67 ------------IMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCAV--AGGANSSFEVVKLLLSASADVNCVDV 132 (655)
Q Consensus 67 ------------Lh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa--~~G~~~~~eiVklLL~~GADvn~~D~ 132 (655)
+|+|+..|+.++|++||++| +|+|.+ |..|+||||+|+ ..|+ .++|++||++||++|..|.
T Consensus 95 ~~~~n~~~~~~~~~~a~~~~~~e~vk~Ll~~G-adin~~-d~~g~T~L~~~~a~~~~~---~eivklLi~~Ga~vn~~d~ 169 (661)
T PHA02917 95 TGYSNINDFNIFSYMKSKNVDVDLIKVLVEHG-FDLSVK-CENHRSVIENYVMTDDPV---PEIIDLFIENGCSVLYEDE 169 (661)
T ss_pred cCCCCCCCcchHHHHHhhcCCHHHHHHHHHcC-CCCCcc-CCCCccHHHHHHHccCCC---HHHHHHHHHcCCCcccccc
Confidence 44555556788999999999 999998 999999999654 4678 9999999999999987654
Q ss_pred ---CC-----------CCccchhhhccC---C--CCcChHHHHHHHHhCCCCCCcccccCCCCcccccccCc
Q 006236 133 ---YG-----------NKPVDLIPVAMK---S--PLHSRKRAIELLLKGDHTIFEEEELVNIPVPQLSKDGT 185 (655)
Q Consensus 133 ---~G-----------~TPLhlAa~~~~---~--~~~g~~eivelLL~~GAdin~~d~~g~tpl~~l~~~~~ 185 (655)
.| .||||+|+..+. . ...++.+++++|+++|++++.+|.+|.+|+..+...+.
T Consensus 170 ~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~ 241 (661)
T PHA02917 170 DDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSH 241 (661)
T ss_pred ccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCC
Confidence 34 599999973000 0 12458899999999999999999999999977665543
No 43
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.64 E-value=3.7e-16 Score=176.39 Aligned_cols=158 Identities=22% Similarity=0.258 Sum_probs=133.7
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccc----cccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCc
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYG----RRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVN 89 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g----~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aD 89 (655)
..+.+|||.|+..||.+.++..|. .|..+... |.+ .+-=.+..|.+|.||||+||..|+++.+..|+..| ++
T Consensus 223 n~~~~pLhlAve~g~~e~lk~~L~-n~~~~a~~--~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~G-a~ 298 (929)
T KOG0510|consen 223 NEKATPLHLAVEGGDIEMLKMCLQ-NGKKIADV--QLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFG-AS 298 (929)
T ss_pred CCCCcchhhhhhcCCHHHHHHHHh-Cccccchh--hhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcC-Cc
Confidence 567899999999999999998886 55544332 111 11112335899999999999999999999999999 99
Q ss_pred cccccCCCCChHHHHHHHcCCCChHHHHHHHHh-CC-CCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCC
Q 006236 90 VNRACGSDGFTALHCAVAGGANSSFEVVKLLLS-AS-ADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIF 167 (655)
Q Consensus 90 vN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~-~G-ADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin 167 (655)
+|.+ +.++.||||.||.+|+ .++|+.||+ .| ...|..|..|.||||+|++ .|+.+++++||+.||...
T Consensus 299 I~~k-n~d~~spLH~AA~yg~---~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~------~gH~~v~qlLl~~GA~~~ 368 (929)
T KOG0510|consen 299 INSK-NKDEESPLHFAAIYGR---INTVERLLQESDTRLLNESDLHGMTPLHLAAK------SGHDRVVQLLLNKGALFL 368 (929)
T ss_pred cccc-CCCCCCchHHHHHccc---HHHHHHHHhCcCccccccccccCCCchhhhhh------cCHHHHHHHHHhcChhhh
Confidence 9999 8999999999999999 999999998 55 6789999999999999987 999999999999999988
Q ss_pred ---cccccCCCCcccccccCc
Q 006236 168 ---EEEELVNIPVPQLSKDGT 185 (655)
Q Consensus 168 ---~~d~~g~tpl~~l~~~~~ 185 (655)
..|.+|.|+++.+++.++
T Consensus 369 ~~~e~D~dg~TaLH~Aa~~g~ 389 (929)
T KOG0510|consen 369 NMSEADSDGNTALHLAAKYGN 389 (929)
T ss_pred cccccccCCchhhhHHHHhcc
Confidence 459999999987776653
No 44
>PHA02795 ankyrin-like protein; Provisional
Probab=99.64 E-value=1.1e-15 Score=167.85 Aligned_cols=143 Identities=17% Similarity=0.123 Sum_probs=114.9
Q ss_pred CCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccc
Q 006236 15 NKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRAC 94 (655)
Q Consensus 15 ~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~ 94 (655)
++.++||.|+..++.+.++.++ .+|++++... .....+..+.|++|.|+..++.+++++|+++| +|+|.+
T Consensus 148 ~~~t~lh~A~~~~~~eIVk~Ll-s~Ga~~~n~~-------~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~G-ADIN~k- 217 (437)
T PHA02795 148 ECLNAYFRGICKKESSVVEFIL-NCGIPDENDV-------KLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYI-EDINQL- 217 (437)
T ss_pred CCCCHHHHHHHcCcHHHHHHHH-hcCCcccccc-------cchhhhhhccchhHHHHhcCHHHHHHHHHhCc-CCcCcC-
Confidence 3468888887777777666655 4888543321 00001245789999999999999999999999 999999
Q ss_pred CCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccC--CCCcChHHHHHHHHhCCCCCCccc
Q 006236 95 GSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMK--SPLHSRKRAIELLLKGDHTIFEEE 170 (655)
Q Consensus 95 d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~--~~~~g~~eivelLL~~GAdin~~d 170 (655)
+..|.||||+|+..|+ .+++++|+++||++|.+|..|.||||+|+.... ....++.+++++|+++|++++..+
T Consensus 218 D~~G~TpLh~Aa~~g~---~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~~ 292 (437)
T PHA02795 218 DAGGRTLLYRAIYAGY---IDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCIK 292 (437)
T ss_pred CCCCCCHHHHHHHcCC---HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCchh
Confidence 9999999999999999 999999999999999999999999999987100 011236799999999999998644
No 45
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.63 E-value=1.2e-15 Score=131.49 Aligned_cols=89 Identities=35% Similarity=0.546 Sum_probs=82.1
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccC
Q 006236 67 IMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMK 146 (655)
Q Consensus 67 Lh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~ 146 (655)
||+||..|+++++++|++.+ .+++. |.||||+|+..|+ .+++++|++.|++++.+|.+|+||||+|+.
T Consensus 1 L~~A~~~~~~~~~~~ll~~~-~~~~~-----~~~~l~~A~~~~~---~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~--- 68 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKG-ADINL-----GNTALHYAAENGN---LEIVKLLLENGADINSQDKNGNTALHYAAE--- 68 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTT-STTTS-----SSBHHHHHHHTTT---HHHHHHHHHTTTCTT-BSTTSSBHHHHHHH---
T ss_pred CHHHHHcCCHHHHHHHHHCc-CCCCC-----CCCHHHHHHHcCC---HHHHHHHHHhcccccccCCCCCCHHHHHHH---
Confidence 79999999999999999988 88874 8899999999999 999999999999999999999999999997
Q ss_pred CCCcChHHHHHHHHhCCCCCCccc
Q 006236 147 SPLHSRKRAIELLLKGDHTIFEEE 170 (655)
Q Consensus 147 ~~~~g~~eivelLL~~GAdin~~d 170 (655)
.++.+++++|+++|++++.+|
T Consensus 69 ---~~~~~~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 69 ---NGNLEIVKLLLEHGADVNIRN 89 (89)
T ss_dssp ---TTHHHHHHHHHHTTT-TTSS-
T ss_pred ---cCCHHHHHHHHHcCCCCCCcC
Confidence 999999999999999999754
No 46
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.63 E-value=2.7e-16 Score=154.89 Aligned_cols=140 Identities=20% Similarity=0.188 Sum_probs=125.5
Q ss_pred ccccCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcc
Q 006236 11 GALYNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNV 90 (655)
Q Consensus 11 ~l~~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDv 90 (655)
..+..|+|+|+.||+.|.+..+..+|. .|+|++..+ ++..++|++|+..|.++||++||+.+ +||
T Consensus 155 ~~De~GfTpLiWAaa~G~i~vV~fLL~-~GAdp~~lg-------------k~resALsLAt~ggytdiV~lLL~r~-vdV 219 (296)
T KOG0502|consen 155 ACDEFGFTPLIWAAAKGHIPVVQFLLN-SGADPDALG-------------KYRESALSLATRGGYTDIVELLLTRE-VDV 219 (296)
T ss_pred CccccCchHhHHHHhcCchHHHHHHHH-cCCChhhhh-------------hhhhhhHhHHhcCChHHHHHHHHhcC-CCc
Confidence 344569999999999999998776665 999999985 88899999999999999999999999 999
Q ss_pred ccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCccc
Q 006236 91 NRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEE 170 (655)
Q Consensus 91 N~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d 170 (655)
|.- |.+|-|||-||+..++ .+||+.||..|||++..|..|.+++++|+. .|+. +|++.|++.+.+...|
T Consensus 220 Nvy-DwNGgTpLlyAvrgnh---vkcve~Ll~sGAd~t~e~dsGy~~mdlAVa------lGyr-~Vqqvie~h~lkl~Q~ 288 (296)
T KOG0502|consen 220 NVY-DWNGGTPLLYAVRGNH---VKCVESLLNSGADVTQEDDSGYWIMDLAVA------LGYR-IVQQVIEKHALKLCQD 288 (296)
T ss_pred cee-ccCCCceeeeeecCCh---HHHHHHHHhcCCCcccccccCCcHHHHHHH------hhhH-HHHHHHHHHHHHHhhc
Confidence 999 9999999999999999 999999999999999999999999999997 5665 8999998888888766
Q ss_pred ccCCCC
Q 006236 171 ELVNIP 176 (655)
Q Consensus 171 ~~g~tp 176 (655)
....++
T Consensus 289 ~~~~~~ 294 (296)
T KOG0502|consen 289 SEKRTP 294 (296)
T ss_pred ccCCCC
Confidence 555554
No 47
>PHA02741 hypothetical protein; Provisional
Probab=99.63 E-value=8.2e-16 Score=149.17 Aligned_cols=115 Identities=16% Similarity=0.159 Sum_probs=101.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHH------cCCCccccccCCCCChHHHHHHHcCCCC-hHHHHHHHHhCCCCCcccCC
Q 006236 60 GFEERTPIMIAAMFGSVAVLKYVIE------TGKVNVNRACGSDGFTALHCAVAGGANS-SFEVVKLLLSASADVNCVDV 132 (655)
Q Consensus 60 d~~G~TPLh~AA~~G~~evvk~LL~------~G~aDvN~~~d~~G~TpLH~Aa~~G~~~-~~eiVklLL~~GADvn~~D~ 132 (655)
|.+|.||||+|+..|+.+++++|+. .| ++++.+ |..|.||||+|+..|+.. ..+++++|++.|+++|.+|.
T Consensus 18 ~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~g-a~in~~-d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~ 95 (169)
T PHA02741 18 NSEGENFFHEAARCGCFDIIARFTPFIRGDCHA-AALNAT-DDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEM 95 (169)
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHHHhccchhh-hhhhcc-CCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCc
Confidence 4789999999999999999999864 35 889988 899999999999998711 13889999999999999985
Q ss_pred -CCCCccchhhhccCCCCcChHHHHHHHHh-CCCCCCcccccCCCCcccccc
Q 006236 133 -YGNKPVDLIPVAMKSPLHSRKRAIELLLK-GDHTIFEEEELVNIPVPQLSK 182 (655)
Q Consensus 133 -~G~TPLhlAa~~~~~~~~g~~eivelLL~-~GAdin~~d~~g~tpl~~l~~ 182 (655)
+|+||||+|+. .++.+++++||. .|++++.+|.+|.+|+..+..
T Consensus 96 ~~g~TpLh~A~~------~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~ 141 (169)
T PHA02741 96 LEGDTALHLAAH------RRDHDLAEWLCCQPGIDLHFCNADNKSPFELAID 141 (169)
T ss_pred CCCCCHHHHHHH------cCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHH
Confidence 99999999997 899999999997 699999999999999866543
No 48
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.61 E-value=5.7e-16 Score=157.47 Aligned_cols=137 Identities=23% Similarity=0.272 Sum_probs=122.0
Q ss_pred HHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCC
Q 006236 20 LLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGSDGF 99 (655)
Q Consensus 20 LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~ 99 (655)
+++.+..|+...++..|.+...|+|.- |..|.+|||+||+.|+..+++.||..| +.+|.. +....
T Consensus 4 if~wcregna~qvrlwld~tehdln~g-------------ddhgfsplhwaakegh~aivemll~rg-arvn~t-nmgdd 68 (448)
T KOG0195|consen 4 IFGWCREGNAFQVRLWLDDTEHDLNVG-------------DDHGFSPLHWAAKEGHVAIVEMLLSRG-ARVNST-NMGDD 68 (448)
T ss_pred hhhhhhcCCeEEEEEEecCcccccccc-------------cccCcchhhhhhhcccHHHHHHHHhcc-cccccc-cCCCC
Confidence 345666677767777777666677765 589999999999999999999999999 999998 88889
Q ss_pred hHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccCCCCccc
Q 006236 100 TALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNIPVPQ 179 (655)
Q Consensus 100 TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g~tpl~~ 179 (655)
||||+|+..|+ .+||..||+..+|+|+.+..|+||||||+- -|.-.|++-|+..||.+++-+..|.+|++.
T Consensus 69 tplhlaaahgh---rdivqkll~~kadvnavnehgntplhyacf------wgydqiaedli~~ga~v~icnk~g~tpldk 139 (448)
T KOG0195|consen 69 TPLHLAAAHGH---RDIVQKLLSRKADVNAVNEHGNTPLHYACF------WGYDQIAEDLISCGAAVNICNKKGMTPLDK 139 (448)
T ss_pred cchhhhhhccc---HHHHHHHHHHhcccchhhccCCCchhhhhh------hcHHHHHHHHHhccceeeecccCCCCchhh
Confidence 99999999999 999999999999999999999999999974 899999999999999999999999999854
Q ss_pred c
Q 006236 180 L 180 (655)
Q Consensus 180 l 180 (655)
.
T Consensus 140 a 140 (448)
T KOG0195|consen 140 A 140 (448)
T ss_pred h
Confidence 3
No 49
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.59 E-value=2.6e-15 Score=145.48 Aligned_cols=116 Identities=15% Similarity=0.126 Sum_probs=102.1
Q ss_pred CCCCChHHHHHHHcCCH----HHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccC-CCC
Q 006236 60 GFEERTPIMIAAMFGSV----AVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVD-VYG 134 (655)
Q Consensus 60 d~~G~TPLh~AA~~G~~----evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D-~~G 134 (655)
+.++.++||.||..|++ +++++|++.+ ++++.. +..|+||||+|+..|+.+..+++++|++.|+++|.+| ..|
T Consensus 17 ~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g-~~~~~~-d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g 94 (166)
T PHA02743 17 DEDEQNTFLRICRTGNIYELMEVAPFISGDG-HLLHRY-DHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTG 94 (166)
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHHHhhcc-hhhhcc-CCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCC
Confidence 57889999999999998 6667788888 999988 8999999999999998444556899999999999998 589
Q ss_pred CCccchhhhccCCCCcChHHHHHHHHh-CCCCCCcccccCCCCccccccc
Q 006236 135 NKPVDLIPVAMKSPLHSRKRAIELLLK-GDHTIFEEEELVNIPVPQLSKD 183 (655)
Q Consensus 135 ~TPLhlAa~~~~~~~~g~~eivelLL~-~GAdin~~d~~g~tpl~~l~~~ 183 (655)
.||||+|+. .++.+++++|+. .|++++..+..|.+|+..+...
T Consensus 95 ~TpLh~A~~------~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~ 138 (166)
T PHA02743 95 NTLLHIAAS------TKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKM 138 (166)
T ss_pred CcHHHHHHH------hCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHc
Confidence 999999997 899999999995 8999999999999998665443
No 50
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.58 E-value=4.2e-15 Score=162.17 Aligned_cols=145 Identities=28% Similarity=0.362 Sum_probs=127.8
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccc
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRA 93 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~ 93 (655)
-+|.|+||.++...+.+.|+.+++ +|++||..+ .+|+||||.|+..|++.++++||.+| +++-..
T Consensus 71 ~DglTalhq~~id~~~e~v~~l~e-~ga~Vn~~d-------------~e~wtPlhaaascg~~~i~~~li~~g-A~~~av 135 (527)
T KOG0505|consen 71 VDGLTALHQACIDDNLEMVKFLVE-NGANVNAQD-------------NEGWTPLHAAASCGYLNIVEYLIQHG-ANLLAV 135 (527)
T ss_pred CccchhHHHHHhcccHHHHHHHHH-hcCCccccc-------------cccCCcchhhcccccHHHHHHHHHhh-hhhhhc
Confidence 467899999988888888877776 999999985 99999999999999999999999998 653321
Q ss_pred ----------------------------------------------------------cCCCCChHHHHHHHcCCCChHH
Q 006236 94 ----------------------------------------------------------CGSDGFTALHCAVAGGANSSFE 115 (655)
Q Consensus 94 ----------------------------------------------------------~d~~G~TpLH~Aa~~G~~~~~e 115 (655)
....|.|+||.|+..|. .+
T Consensus 136 Nsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy---~e 212 (527)
T KOG0505|consen 136 NSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGY---TE 212 (527)
T ss_pred cCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhH---HH
Confidence 02348999999999999 99
Q ss_pred HHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccCCCCcccccc
Q 006236 116 VVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNIPVPQLSK 182 (655)
Q Consensus 116 iVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g~tpl~~l~~ 182 (655)
+.++||.+|.+++.+|.+|+||||.|+. -+..+++++|+.+|++++.+...|.+|+++...
T Consensus 213 ~~~lLl~ag~~~~~~D~dgWtPlHAAA~------Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~de 273 (527)
T KOG0505|consen 213 VAALLLQAGYSVNIKDYDGWTPLHAAAH------WGQEDACELLVEHGADMDAKTKMGETPLDVADE 273 (527)
T ss_pred HHHHHHHhccCcccccccCCCcccHHHH------hhhHhHHHHHHHhhcccchhhhcCCCCccchhh
Confidence 9999999999999999999999999986 899999999999999999999889988876543
No 51
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.58 E-value=3.4e-15 Score=177.27 Aligned_cols=140 Identities=22% Similarity=0.285 Sum_probs=79.9
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCC--------------------cccccccCCccCCCCCChHHHHHHHc
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFDVDEPS--------------------FWYGRRIGSKKMGFEERTPIMIAAMF 73 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~d--------------------lw~g~~~~~~~~d~~G~TPLh~AA~~ 73 (655)
..|+|+|+.++..|+.+.+.-+++ .++.++... ..+...++....+..|.||||+|+.+
T Consensus 472 ~~G~T~Lhlaaq~Gh~~~~~llle-~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~ 550 (1143)
T KOG4177|consen 472 KQGFTPLHLAAQEGHTEVVQLLLE-GGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHY 550 (1143)
T ss_pred cccCcchhhhhccCCchHHHHhhh-cCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhc
Confidence 456677777777776666555554 443333321 00000111111235556666666666
Q ss_pred CCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChH
Q 006236 74 GSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRK 153 (655)
Q Consensus 74 G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~ 153 (655)
|++++|++||++| +|++.+ ++.|+||||.|+..|+ .+|+.+|+++||++|..|.+|.|||++|+. .++.
T Consensus 551 g~v~~VkfLLe~g-Adv~ak-~~~G~TPLH~Aa~~G~---~~i~~LLlk~GA~vna~d~~g~TpL~iA~~------lg~~ 619 (1143)
T KOG4177|consen 551 GNVDLVKFLLEHG-ADVNAK-DKLGYTPLHQAAQQGH---NDIAELLLKHGASVNAADLDGFTPLHIAVR------LGYL 619 (1143)
T ss_pred CCchHHHHhhhCC-cccccc-CCCCCChhhHHHHcCh---HHHHHHHHHcCCCCCcccccCcchhHHHHH------hccc
Confidence 6666666666666 666666 5666666666666665 666666666666666666666666666655 5666
Q ss_pred HHHHHHHhCCCC
Q 006236 154 RAIELLLKGDHT 165 (655)
Q Consensus 154 eivelLL~~GAd 165 (655)
+++++|+..+++
T Consensus 620 ~~~k~l~~~~~~ 631 (1143)
T KOG4177|consen 620 SVVKLLKVVTAT 631 (1143)
T ss_pred chhhHHHhccCc
Confidence 666666666655
No 52
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.57 E-value=4e-15 Score=176.69 Aligned_cols=155 Identities=26% Similarity=0.282 Sum_probs=123.3
Q ss_pred CCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCC----------------------cccccccCCccCCCCCChHHHHHHH
Q 006236 15 NKSSILLELSASDDISAFKREIEEKGFDVDEPS----------------------FWYGRRIGSKKMGFEERTPIMIAAM 72 (655)
Q Consensus 15 ~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~d----------------------lw~g~~~~~~~~d~~G~TPLh~AA~ 72 (655)
.|+|++|.+|..|.+..+..++.+.|.++|..- +|.++ ..+-....|.|+||.|+.
T Consensus 439 lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~--~~~~~~~~~l~~lhla~~ 516 (1143)
T KOG4177|consen 439 LGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGA--NDNLDAKKGLTPLHLAAD 516 (1143)
T ss_pred cCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCC--ccCccchhccchhhhhhh
Confidence 479999999999988888888888999999874 00000 001111334555555555
Q ss_pred cCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcCh
Q 006236 73 FGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSR 152 (655)
Q Consensus 73 ~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~ 152 (655)
.+...+++.+++.| ++++.+ +..|.||||.|+.+|+ +++|++||++|||++.+|..|+||||.|+. .|+
T Consensus 517 ~~~v~~~~~l~~~g-a~v~~~-~~r~~TpLh~A~~~g~---v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~------~G~ 585 (1143)
T KOG4177|consen 517 EDTVKVAKILLEHG-ANVDLR-TGRGYTPLHVAVHYGN---VDLVKFLLEHGADVNAKDKLGYTPLHQAAQ------QGH 585 (1143)
T ss_pred hhhHHHHHHHhhcC-Cceehh-cccccchHHHHHhcCC---chHHHHhhhCCccccccCCCCCChhhHHHH------cCh
Confidence 55555555555566 777777 8899999999999999 999999999999999999999999999997 889
Q ss_pred HHHHHHHHhCCCCCCcccccCCCCcccccc
Q 006236 153 KRAIELLLKGDHTIFEEEELVNIPVPQLSK 182 (655)
Q Consensus 153 ~eivelLL~~GAdin~~d~~g~tpl~~l~~ 182 (655)
.+|+++|+++||++|..|.++.+|+.....
T Consensus 586 ~~i~~LLlk~GA~vna~d~~g~TpL~iA~~ 615 (1143)
T KOG4177|consen 586 NDIAELLLKHGASVNAADLDGFTPLHIAVR 615 (1143)
T ss_pred HHHHHHHHHcCCCCCcccccCcchhHHHHH
Confidence 999999999999999999999999854443
No 53
>PHA02730 ankyrin-like protein; Provisional
Probab=99.57 E-value=1.3e-14 Score=166.33 Aligned_cols=140 Identities=13% Similarity=0.189 Sum_probs=115.4
Q ss_pred HHHHHHHhCC--HHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCC----HHHHHHHHHcCCC--cc
Q 006236 19 ILLELSASDD--ISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGS----VAVLKYVIETGKV--NV 90 (655)
Q Consensus 19 ~LL~AAa~gd--~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~----~evvk~LL~~G~a--Dv 90 (655)
.|+.....++ ...+.++|.++|++||.. ..|.||||+|+..++ .+++++||++| + |+
T Consensus 346 ~l~~Y~~~~~~v~ieIvelLIs~GAdIN~k--------------~~G~TpLH~Aa~~nnn~i~~eIvelLIs~G-a~~dI 410 (672)
T PHA02730 346 MLINYLHYGDMVSIPILRCMLDNGATMDKT--------------TDNNYPLHDYFVNNNNIVDVNVVRFIVENN-GHMAI 410 (672)
T ss_pred HHHHHHhcCCcCcHHHHHHHHHCCCCCCcC--------------CCCCcHHHHHHHHcCCcchHHHHHHHHHcC-CCccc
Confidence 5666777664 446677777799999974 579999999998885 89999999998 6 69
Q ss_pred ccccCCCCChHHHH---HHHcCC-----C-ChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHh
Q 006236 91 NRACGSDGFTALHC---AVAGGA-----N-SSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLK 161 (655)
Q Consensus 91 N~~~d~~G~TpLH~---Aa~~G~-----~-~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~ 161 (655)
|.+ |..|.||||. |...+. + ...+++++|+.+|||+|.+|..|.||||+|+. .++.+++++|++
T Consensus 411 N~k-d~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~------~~~~eive~LI~ 483 (672)
T PHA02730 411 NHV-SNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVD------VNNIQFARRLLE 483 (672)
T ss_pred ccc-ccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHH------hCCHHHHHHHHH
Confidence 988 8899999994 332221 0 12467999999999999999999999999987 789999999999
Q ss_pred CCCCCCcccc-cCCCCcccc
Q 006236 162 GDHTIFEEEE-LVNIPVPQL 180 (655)
Q Consensus 162 ~GAdin~~d~-~g~tpl~~l 180 (655)
+||+++..+. .|.+++...
T Consensus 484 ~GAdIN~~d~~~g~TaL~~A 503 (672)
T PHA02730 484 YGASVNTTSRSIINTAIQKS 503 (672)
T ss_pred CCCCCCCCCCcCCcCHHHHH
Confidence 9999999996 588888544
No 54
>PHA02917 ankyrin-like protein; Provisional
Probab=99.57 E-value=1.2e-14 Score=168.99 Aligned_cols=108 Identities=22% Similarity=0.156 Sum_probs=88.6
Q ss_pred HHhcCCCCCCCCcccccccCCccCCCCCChHHHHHH--HcCCHHHHHHHHHcCCCcccccc--CCCC-----------Ch
Q 006236 36 IEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAA--MFGSVAVLKYVIETGKVNVNRAC--GSDG-----------FT 100 (655)
Q Consensus 36 L~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA--~~G~~evvk~LL~~G~aDvN~~~--d~~G-----------~T 100 (655)
|.++|+|+|.+ |..|+||||+|+ ..|+.+++++||++| +|+|... +..| .|
T Consensus 122 Ll~~Gadin~~-------------d~~g~T~L~~~~a~~~~~~eivklLi~~G-a~vn~~d~~~~~g~~~~~~~~~~~~t 187 (661)
T PHA02917 122 LVEHGFDLSVK-------------CENHRSVIENYVMTDDPVPEIIDLFIENG-CSVLYEDEDDEYGYAYDDYQPRNCGT 187 (661)
T ss_pred HHHcCCCCCcc-------------CCCCccHHHHHHHccCCCHHHHHHHHHcC-CCcccccccccccccccccccccccc
Confidence 33466666665 589999999654 578999999999999 9998651 2234 59
Q ss_pred HHHHHHH-----------cCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcCh--HHHHHHHHhCCCCCC
Q 006236 101 ALHCAVA-----------GGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSR--KRAIELLLKGDHTIF 167 (655)
Q Consensus 101 pLH~Aa~-----------~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~--~eivelLL~~GAdin 167 (655)
|||+|+. +++ .++|++|+++|||+|.+|.+|.||||+|+. .++ .+++++|++ |++++
T Consensus 188 ~L~~a~~~~~~~~~~~~~~~~---~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~------~g~~~~eivk~Li~-g~d~~ 257 (661)
T PHA02917 188 VLHLYIISHLYSESDTRAYVR---PEVVKCLINHGIKPSSIDKNYCTALQYYIK------SSHIDIDIVKLLMK-GIDNT 257 (661)
T ss_pred HHHHHHhhcccccccccccCc---HHHHHHHHHCCCCcccCCCCCCcHHHHHHH------cCCCcHHHHHHHHh-CCccc
Confidence 9999986 346 899999999999999999999999999987 565 489999985 88776
No 55
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.55 E-value=1.5e-14 Score=152.87 Aligned_cols=114 Identities=16% Similarity=0.151 Sum_probs=100.3
Q ss_pred CCCCCChH-HHHHHHcCCHHHHHHHHHcCCCcccccc---CCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCccc-CCC
Q 006236 59 MGFEERTP-IMIAAMFGSVAVLKYVIETGKVNVNRAC---GSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCV-DVY 133 (655)
Q Consensus 59 ~d~~G~TP-Lh~AA~~G~~evvk~LL~~G~aDvN~~~---d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~-D~~ 133 (655)
.|..|+|+ ||.|+.+|+.+++++|+++| +|+|... +..|.||||+|+..|+ .+++++|+++|||+|.. +..
T Consensus 28 ~d~~~~~~lL~~A~~~~~~eivk~LL~~G-AdiN~~~~~sd~~g~TpLh~Aa~~~~---~eivklLL~~GADVN~~~~~~ 103 (300)
T PHA02884 28 KNKICIANILYSSIKFHYTDIIDAILKLG-ADPEAPFPLSENSKTNPLIYAIDCDN---DDAAKLLIRYGADVNRYAEEA 103 (300)
T ss_pred cCcCCCCHHHHHHHHcCCHHHHHHHHHCC-CCccccCcccCCCCCCHHHHHHHcCC---HHHHHHHHHcCCCcCcccCCC
Confidence 35667665 56667779999999999999 9999862 3589999999999999 99999999999999986 468
Q ss_pred CCCccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccCCCCcccccc
Q 006236 134 GNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNIPVPQLSK 182 (655)
Q Consensus 134 G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g~tpl~~l~~ 182 (655)
|.||||+|+. .++.+++++|+.+|++++.+|..|.+|+..+..
T Consensus 104 g~TpLh~Aa~------~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~ 146 (300)
T PHA02884 104 KITPLYISVL------HGCLKCLEILLSYGADINIQTNDMVTPIELALM 146 (300)
T ss_pred CCCHHHHHHH------cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 9999999987 899999999999999999999999999865543
No 56
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.54 E-value=4.2e-14 Score=121.77 Aligned_cols=89 Identities=35% Similarity=0.522 Sum_probs=79.4
Q ss_pred HHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCC
Q 006236 20 LLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGSDGF 99 (655)
Q Consensus 20 LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~ 99 (655)
||.|+..|+.+.++.++. .+.+++. |+||||+|+..|+.+++++|++.| ++++.. +..|+
T Consensus 1 L~~A~~~~~~~~~~~ll~-~~~~~~~-----------------~~~~l~~A~~~~~~~~~~~Ll~~g-~~~~~~-~~~g~ 60 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLE-KGADINL-----------------GNTALHYAAENGNLEIVKLLLENG-ADINSQ-DKNGN 60 (89)
T ss_dssp HHHHHHTTTHHHHHHHHH-TTSTTTS-----------------SSBHHHHHHHTTTHHHHHHHHHTT-TCTT-B-STTSS
T ss_pred CHHHHHcCCHHHHHHHHH-CcCCCCC-----------------CCCHHHHHHHcCCHHHHHHHHHhc-cccccc-CCCCC
Confidence 688999999999999988 7766553 679999999999999999999999 999998 89999
Q ss_pred hHHHHHHHcCCCChHHHHHHHHhCCCCCcccC
Q 006236 100 TALHCAVAGGANSSFEVVKLLLSASADVNCVD 131 (655)
Q Consensus 100 TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D 131 (655)
||||+|+..|+ .+++++|+++|++++.+|
T Consensus 61 t~L~~A~~~~~---~~~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 61 TALHYAAENGN---LEIVKLLLEHGADVNIRN 89 (89)
T ss_dssp BHHHHHHHTTH---HHHHHHHHHTTT-TTSS-
T ss_pred CHHHHHHHcCC---HHHHHHHHHcCCCCCCcC
Confidence 99999999999 999999999999999875
No 57
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.53 E-value=2.2e-14 Score=146.07 Aligned_cols=129 Identities=21% Similarity=0.254 Sum_probs=107.8
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccc
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRA 93 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~ 93 (655)
.+|+++||.+|..|... +++.|+..|+.||..+ ....||||+||.+|+-++|..||+.. +|+|..
T Consensus 32 dhgfsplhwaakegh~a-ivemll~rgarvn~tn-------------mgddtplhlaaahghrdivqkll~~k-advnav 96 (448)
T KOG0195|consen 32 DHGFSPLHWAAKEGHVA-IVEMLLSRGARVNSTN-------------MGDDTPLHLAAAHGHRDIVQKLLSRK-ADVNAV 96 (448)
T ss_pred ccCcchhhhhhhcccHH-HHHHHHhccccccccc-------------CCCCcchhhhhhcccHHHHHHHHHHh-cccchh
Confidence 57899888777766655 4555556999999985 56689999999999999999999999 999999
Q ss_pred cCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCC
Q 006236 94 CGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIF 167 (655)
Q Consensus 94 ~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin 167 (655)
+..|+|||||||.-|. ..|.+-|+..||-+++.+++|.|||+.|.. .-...+.++--++|-+++
T Consensus 97 -nehgntplhyacfwgy---dqiaedli~~ga~v~icnk~g~tpldkakp------~l~~~l~e~aek~gq~~n 160 (448)
T KOG0195|consen 97 -NEHGNTPLHYACFWGY---DQIAEDLISCGAAVNICNKKGMTPLDKAKP------MLKNTLLEIAEKHGQSPN 160 (448)
T ss_pred -hccCCCchhhhhhhcH---HHHHHHHHhccceeeecccCCCCchhhhch------HHHHHHHHHHHHhCCCCC
Confidence 9999999999999998 889999999999999999999999999853 222334444445777776
No 58
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.53 E-value=1.9e-14 Score=169.81 Aligned_cols=159 Identities=16% Similarity=0.106 Sum_probs=109.3
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCC--CCCCCcccccc---------------cC------------CccCCCCCC
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFD--VDEPSFWYGRR---------------IG------------SKKMGFEER 64 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~Gad--In~~dlw~g~~---------------~~------------~~~~d~~G~ 64 (655)
..|.|+||++|+.++...++++|++.|.. ....-+.+.+. .+ .......|.
T Consensus 50 ~~G~t~Lh~~A~~~~~~eiv~lLl~~g~~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~ 129 (743)
T TIGR00870 50 RLGRSALFVAAIENENLELTELLLNLSCRGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGI 129 (743)
T ss_pred ccchhHHHHHHHhcChHHHHHHHHhCCCCCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCC
Confidence 45788888888888888888888878751 11111111111 00 001124588
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCccccccC-------------CCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccC
Q 006236 65 TPIMIAAMFGSVAVLKYVIETGKVNVNRACG-------------SDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVD 131 (655)
Q Consensus 65 TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d-------------~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D 131 (655)
||||+||..|+.++|++||++| +|+|..++ ..|.||||+|+..|+ .+++++|++.|+|+|.+|
T Consensus 130 TpLhlAa~~~~~eiVklLL~~G-Adv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~---~~iv~lLl~~gadin~~d 205 (743)
T TIGR00870 130 TALHLAAHRQNYEIVKLLLERG-ASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGS---PSIVALLSEDPADILTAD 205 (743)
T ss_pred cHHHHHHHhCCHHHHHHHHhCC-CCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCC---HHHHHHHhcCCcchhhHh
Confidence 8888888888888888888888 88886532 357888888888888 888888888888888888
Q ss_pred CCCCCccchhhhccCCCCcC---------hHHHHHHHHhCCCCC-------CcccccCCCCcccccc
Q 006236 132 VYGNKPVDLIPVAMKSPLHS---------RKRAIELLLKGDHTI-------FEEEELVNIPVPQLSK 182 (655)
Q Consensus 132 ~~G~TPLhlAa~~~~~~~~g---------~~eivelLL~~GAdi-------n~~d~~g~tpl~~l~~ 182 (655)
..|+||||+|+. .+ ...+.++++..++.. ++.|.+|.+|+..+..
T Consensus 206 ~~g~T~Lh~A~~------~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~ 266 (743)
T TIGR00870 206 SLGNTLLHLLVM------ENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAK 266 (743)
T ss_pred hhhhHHHHHHHh------hhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhh
Confidence 888888888875 22 234555666555544 5567777777755543
No 59
>PHA02730 ankyrin-like protein; Provisional
Probab=99.52 E-value=4.5e-14 Score=162.00 Aligned_cols=133 Identities=16% Similarity=0.105 Sum_probs=110.2
Q ss_pred cCCchHHHHHHHhCCH---HHHHHHHHhcCC--CCCCCCcccccccCCccCCCCCChHHHH--HHH-cC---------CH
Q 006236 14 YNKSSILLELSASDDI---SAFKREIEEKGF--DVDEPSFWYGRRIGSKKMGFEERTPIMI--AAM-FG---------SV 76 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~---~~vk~LL~~~Ga--dIn~~dlw~g~~~~~~~~d~~G~TPLh~--AA~-~G---------~~ 76 (655)
..|.||||.||..++. ..+.++|..+|+ ++|.++ ..|.||||. ++. .+ ..
T Consensus 376 ~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd-------------~~G~T~Lh~~i~a~~~n~~~~~~e~~~~ 442 (672)
T PHA02730 376 TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVS-------------NNGRLCMYGLILSRFNNCGYHCYETILI 442 (672)
T ss_pred CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccc-------------cCCCchHhHHHHHHhccccccccchhHH
Confidence 4688999999998852 455555556887 588774 889999984 332 32 23
Q ss_pred HHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCC-CCCCccchhhhccCCCCcChHHH
Q 006236 77 AVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDV-YGNKPVDLIPVAMKSPLHSRKRA 155 (655)
Q Consensus 77 evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~-~G~TPLhlAa~~~~~~~~g~~ei 155 (655)
+++++|+.+| +|+|.+ |..|.||||+|+..++ .+++++|+++||++|..|. .|.||||+|+. ...++.++
T Consensus 443 ~ivk~LIs~G-ADINak-D~~G~TPLh~Aa~~~~---~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~----~~~~~~eI 513 (672)
T PHA02730 443 DVFDILSKYM-DDIDMI-DNENKTLLYYAVDVNN---IQFARRLLEYGASVNTTSRSIINTAIQKSSY----RRENKTKL 513 (672)
T ss_pred HHHHHHHhcc-cchhcc-CCCCCCHHHHHHHhCC---HHHHHHHHHCCCCCCCCCCcCCcCHHHHHHH----hhcCcHHH
Confidence 5799999999 999999 9999999999999999 9999999999999999997 59999999974 12368999
Q ss_pred HHHHHhCCCCCCc
Q 006236 156 IELLLKGDHTIFE 168 (655)
Q Consensus 156 velLL~~GAdin~ 168 (655)
+++||++|++++.
T Consensus 514 v~~LLs~ga~i~~ 526 (672)
T PHA02730 514 VDLLLSYHPTLET 526 (672)
T ss_pred HHHHHHcCCCHHH
Confidence 9999999998874
No 60
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.51 E-value=1.4e-14 Score=137.79 Aligned_cols=115 Identities=17% Similarity=0.147 Sum_probs=93.3
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcC-CCc-----cccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccC-
Q 006236 59 MGFEERTPIMIAAMFGSVAVLKYVIETG-KVN-----VNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVD- 131 (655)
Q Consensus 59 ~d~~G~TPLh~AA~~G~~evvk~LL~~G-~aD-----vN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D- 131 (655)
.|.+|.||||+|+..|++ +++++..+ ..+ ++.. |..|.||||+|+..|+.+..+++++|++.|+++|.+|
T Consensus 13 ~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~-d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~ 89 (154)
T PHA02736 13 PDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEY-NRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKER 89 (154)
T ss_pred cCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHh-cCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCC
Confidence 368899999999999984 33333222 012 3344 7899999999999998434467999999999999998
Q ss_pred CCCCCccchhhhccCCCCcChHHHHHHHHh-CCCCCCcccccCCCCcccccc
Q 006236 132 VYGNKPVDLIPVAMKSPLHSRKRAIELLLK-GDHTIFEEEELVNIPVPQLSK 182 (655)
Q Consensus 132 ~~G~TPLhlAa~~~~~~~~g~~eivelLL~-~GAdin~~d~~g~tpl~~l~~ 182 (655)
.+|+||||+|+. .++.+++++|+. .|++++.++..|.+|+..+..
T Consensus 90 ~~g~T~Lh~A~~------~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~ 135 (154)
T PHA02736 90 VFGNTPLHIAVY------TQNYELATWLCNQPGVNMEILNYAFKTPYYVACE 135 (154)
T ss_pred CCCCcHHHHHHH------hCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHH
Confidence 499999999997 899999999997 599999999999999865543
No 61
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.48 E-value=5.1e-13 Score=118.55 Aligned_cols=122 Identities=34% Similarity=0.499 Sum_probs=108.6
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccc
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRA 93 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~ 93 (655)
.+|.|+|+.|+..++.+.+..++. .+.+++.. +..|.||||+|+..++.+++++|++.+ ++++..
T Consensus 5 ~~g~t~l~~a~~~~~~~~i~~li~-~~~~~~~~-------------~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~ 69 (126)
T cd00204 5 EDGRTPLHLAASNGHLEVVKLLLE-NGADVNAK-------------DNDGRTPLHLAAKNGHLEIVKLLLEKG-ADVNAR 69 (126)
T ss_pred cCCCCHHHHHHHcCcHHHHHHHHH-cCCCCCcc-------------CCCCCcHHHHHHHcCCHHHHHHHHHcC-CCcccc
Confidence 458899999999999877776665 88887666 488999999999999999999999999 889888
Q ss_pred cCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHH
Q 006236 94 CGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLL 160 (655)
Q Consensus 94 ~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL 160 (655)
+..|.||+|+|+..++ .+++++|+..+.+++..|..|.||+++|.. .++.+++++|+
T Consensus 70 -~~~~~~~l~~a~~~~~---~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~~Ll 126 (126)
T cd00204 70 -DKDGNTPLHLAARNGN---LDVVKLLLKHGADVNARDKDGRTPLHLAAK------NGHLEVVKLLL 126 (126)
T ss_pred -CCCCCCHHHHHHHcCc---HHHHHHHHHcCCCCcccCCCCCCHHHHHHh------cCCHHHHHHhC
Confidence 7899999999999999 999999999999999999999999999986 68888888874
No 62
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.48 E-value=1.1e-13 Score=119.89 Aligned_cols=103 Identities=28% Similarity=0.440 Sum_probs=93.3
Q ss_pred HHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCCCC
Q 006236 19 ILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGSDG 98 (655)
Q Consensus 19 ~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G 98 (655)
.+.....+|.++.+++.+. .|.+||.. ..|+||||+||-+|..+++++|+..| ++|+.+ |+.|
T Consensus 5 ~~~W~vkNG~~DeVk~~v~-~g~nVn~~--------------~ggR~plhyAAD~GQl~ilefli~iG-A~i~~k-DKyg 67 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVN-EGLNVNEI--------------YGGRTPLHYAADYGQLSILEFLISIG-ANIQDK-DKYG 67 (117)
T ss_pred hHhhhhccCcHHHHHHHHH-ccccHHHH--------------hCCcccchHhhhcchHHHHHHHHHhc-cccCCc-cccC
Confidence 4567788999999999987 77899986 67999999999999999999999999 999999 9999
Q ss_pred ChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchh
Q 006236 99 FTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLI 141 (655)
Q Consensus 99 ~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlA 141 (655)
.|||.-|+..|+ .++|++||+.|||-.....+|.+.+..+
T Consensus 68 ITPLLsAvwEGH---~~cVklLL~~GAdrt~~~PdG~~~~eat 107 (117)
T KOG4214|consen 68 ITPLLSAVWEGH---RDCVKLLLQNGADRTIHAPDGTALIEAT 107 (117)
T ss_pred CcHHHHHHHHhh---HHHHHHHHHcCcccceeCCCchhHHhhc
Confidence 999999999999 9999999999999988888888776653
No 63
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.47 E-value=8.7e-14 Score=164.20 Aligned_cols=147 Identities=22% Similarity=0.320 Sum_probs=119.2
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHh-cCCCCCCCCcccccccCCccCCCCCChHHH-HHHHcCCHHHHHHHHHcCCCc--
Q 006236 14 YNKSSILLELSASDDISAFKREIEE-KGFDVDEPSFWYGRRIGSKKMGFEERTPIM-IAAMFGSVAVLKYVIETGKVN-- 89 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~-~GadIn~~dlw~g~~~~~~~~d~~G~TPLh-~AA~~G~~evvk~LL~~G~aD-- 89 (655)
.++...|+.||..||.+.++++|++ .+.++|..| ..|+|||| .|+..++.+++++|++.+ +.
T Consensus 15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d-------------~~G~t~Lh~~A~~~~~~eiv~lLl~~g-~~~~ 80 (743)
T TIGR00870 15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPD-------------RLGRSALFVAAIENENLELTELLLNLS-CRGA 80 (743)
T ss_pred CHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcC-------------ccchhHHHHHHHhcChHHHHHHHHhCC-CCCC
Confidence 4567889999999999999999873 278888764 67788888 677777777777777776 20
Q ss_pred ------------------------------------cccc---cCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCccc
Q 006236 90 ------------------------------------VNRA---CGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCV 130 (655)
Q Consensus 90 ------------------------------------vN~~---~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~ 130 (655)
++.. ....|.||||+|+..|+ .++|++|+++|||++.+
T Consensus 81 ~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~---~eiVklLL~~GAdv~~~ 157 (743)
T TIGR00870 81 VGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQN---YEIVKLLLERGASVPAR 157 (743)
T ss_pred cChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCC---HHHHHHHHhCCCCCCcC
Confidence 0000 02359999999999999 99999999999999965
Q ss_pred C--------------CCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccCCCCccccccc
Q 006236 131 D--------------VYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNIPVPQLSKD 183 (655)
Q Consensus 131 D--------------~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g~tpl~~l~~~ 183 (655)
+ ..|.||||+|+. .++.+++++|+++|+|++..|..|.++++.+...
T Consensus 158 ~~~~~~~~~~~~~~~~~g~tpL~~Aa~------~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~ 218 (743)
T TIGR00870 158 ACGDFFVKSQGVDSFYHGESPLNAAAC------LGSPSIVALLSEDPADILTADSLGNTLLHLLVME 218 (743)
T ss_pred cCCchhhcCCCCCcccccccHHHHHHH------hCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhh
Confidence 3 368999999987 8999999999999999999999999998765544
No 64
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.46 E-value=6.7e-14 Score=157.34 Aligned_cols=144 Identities=19% Similarity=0.144 Sum_probs=115.5
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccc
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRA 93 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~ 93 (655)
++|+|.||||+.+|....++.+|+ +.+-++..+ ..|.+|||+||..|+.+++|.||..+ ..+|..
T Consensus 47 ~~gfTalhha~Lng~~~is~llle-~ea~ldl~d-------------~kg~~plhlaaw~g~~e~vkmll~q~-d~~na~ 111 (854)
T KOG0507|consen 47 YSGFTLLHHAVLNGQNQISKLLLD-YEALLDLCD-------------TKGILPLHLAAWNGNLEIVKMLLLQT-DILNAV 111 (854)
T ss_pred ccchhHHHHHHhcCchHHHHHHhc-chhhhhhhh-------------ccCcceEEehhhcCcchHHHHHHhcc-cCCCcc
Confidence 578999999999998888777665 666677663 77888888888888888888888888 777877
Q ss_pred cCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhh------------------------------
Q 006236 94 CGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPV------------------------------ 143 (655)
Q Consensus 94 ~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~------------------------------ 143 (655)
...|.||||.|+..|+ .+++.+||.+|+|+-..|..+.|+|++|++
T Consensus 112 -~~e~~tplhlaaqhgh---~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~ 187 (854)
T KOG0507|consen 112 -NIENETPLHLAAQHGH---LEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPF 187 (854)
T ss_pred -cccCcCccchhhhhcc---hHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCC
Confidence 7888888888888888 888888888888887777777777777766
Q ss_pred -----ccCCCCcChHHHHHHHHhCCCCCCcccccCCCC
Q 006236 144 -----AMKSPLHSRKRAIELLLKGDHTIFEEEELVNIP 176 (655)
Q Consensus 144 -----~~~~~~~g~~eivelLL~~GAdin~~d~~g~tp 176 (655)
.|.+..+|+.+|++.|++.|.+||...+.|..-
T Consensus 188 ~~~~plHlaakngh~~~~~~ll~ag~din~~t~~gtal 225 (854)
T KOG0507|consen 188 PAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDGTAL 225 (854)
T ss_pred CCcCCcchhhhcchHHHHHHHHhcCCCcccccccchhh
Confidence 134556899999999999999999866665443
No 65
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.45 E-value=2.1e-13 Score=142.91 Aligned_cols=124 Identities=27% Similarity=0.375 Sum_probs=107.7
Q ss_pred cCCchHHHHHHHh-----CCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCC
Q 006236 14 YNKSSILLELSAS-----DDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKV 88 (655)
Q Consensus 14 ~~g~s~LL~AAa~-----gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~a 88 (655)
..|+|+++.+|.. .+...|.+|+. . .|||.+. ...|.|+||+|+.+|++++||.||..| +
T Consensus 300 rAGYtpiMLaALA~lk~~~d~~vV~~LF~-m-gnVNaKA------------sQ~gQTALMLAVSHGr~d~vk~LLacg-A 364 (452)
T KOG0514|consen 300 RAGYTPVMLAALAKLKQPADRTVVERLFK-M-GDVNAKA------------SQHGQTALMLAVSHGRVDMVKALLACG-A 364 (452)
T ss_pred cccccHHHHHHHHhhcchhhHHHHHHHHh-c-cCcchhh------------hhhcchhhhhhhhcCcHHHHHHHHHcc-C
Confidence 4689998877653 35555666654 3 4678764 478999999999999999999999999 9
Q ss_pred ccccccCCCCChHHHHHHHcCCCChHHHHHHHHhC-CCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhC
Q 006236 89 NVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSA-SADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKG 162 (655)
Q Consensus 89 DvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~-GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~ 162 (655)
|||.. |.+|.|+|+||+..|+ .|||++||.. ++|+...|.+|.|+|.+|.. .|+.+|.-+|..+
T Consensus 365 dVNiQ-DdDGSTALMCA~EHGh---kEivklLLA~p~cd~sLtD~DgSTAl~IAle------agh~eIa~mlYa~ 429 (452)
T KOG0514|consen 365 DVNIQ-DDDGSTALMCAAEHGH---KEIVKLLLAVPSCDISLTDVDGSTALSIALE------AGHREIAVMLYAH 429 (452)
T ss_pred CCccc-cCCccHHHhhhhhhCh---HHHHHHHhccCcccceeecCCCchhhhhHHh------cCchHHHHHHHHH
Confidence 99999 9999999999999999 9999999976 79999999999999999986 8999999988754
No 66
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.43 E-value=1.6e-12 Score=126.52 Aligned_cols=123 Identities=31% Similarity=0.417 Sum_probs=111.1
Q ss_pred CchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCC-----HHHHHHHHHcCCC--
Q 006236 16 KSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGS-----VAVLKYVIETGKV-- 88 (655)
Q Consensus 16 g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~-----~evvk~LL~~G~a-- 88 (655)
+.++++.++..++...+..++. .|++++..+ .+|.||||+|+..++ .+++++||+.| +
T Consensus 73 ~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~-------------~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g-~~~ 137 (235)
T COG0666 73 GRLPLHSAASKGDDKIVKLLLA-SGADVNAKD-------------ADGDTPLHLAALNGNPPEGNIEVAKLLLEAG-ADL 137 (235)
T ss_pred ccCHHHHHHHcCcHHHHHHHHH-cCCCccccc-------------CCCCcHHHHHHhcCCcccchHHHHHHHHHcC-CCC
Confidence 5688888888888888755554 999998874 999999999999999 99999999999 7
Q ss_pred -ccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCC
Q 006236 89 -NVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGD 163 (655)
Q Consensus 89 -DvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~G 163 (655)
+.+.. +..|.||||+|+..|+ .+++++|++.|++++..+..|.|++++|+. .++.++++.|++.+
T Consensus 138 ~~~~~~-~~~g~tpl~~A~~~~~---~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~------~~~~~~~~~l~~~~ 203 (235)
T COG0666 138 DVNNLR-DEDGNTPLHWAALNGD---ADIVELLLEAGADPNSRNSYGVTALDPAAK------NGRIELVKLLLDKG 203 (235)
T ss_pred CCcccc-CCCCCchhHHHHHcCc---hHHHHHHHhcCCCCcccccCCCcchhhhcc------cchHHHHHHHHhcC
Confidence 55555 9999999999999999 899999999999999999999999999986 89999999999977
No 67
>PHA02792 ankyrin-like protein; Provisional
Probab=99.41 E-value=1.3e-12 Score=148.90 Aligned_cols=137 Identities=14% Similarity=0.125 Sum_probs=112.4
Q ss_pred HHHHHHhC--CHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCCC
Q 006236 20 LLELSASD--DISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGSD 97 (655)
Q Consensus 20 LL~AAa~g--d~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~ 97 (655)
|+.....+ +.+ +.++|.++|++++. ..+...++.||..|+.+++++|+++| ||+|.+ |.+
T Consensus 310 l~~Yl~~~~v~ie-iIK~LId~Ga~~~r---------------~~~~n~~~~Aa~~gn~eIVelLIs~G-ADIN~k-D~~ 371 (631)
T PHA02792 310 LSEYVSYHTVYIN-VIKCMIDEGATLYR---------------FKHINKYFQKFDNRDPKVVEYILKNG-NVVVED-DDN 371 (631)
T ss_pred HHHHHhcCCccHH-HHHHHHHCCCcccc---------------CCcchHHHHHHHcCCHHHHHHHHHcC-Cchhhh-cCC
Confidence 44455555 333 44555558998752 23567899999999999999999999 999988 666
Q ss_pred --CChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccCCC
Q 006236 98 --GFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNI 175 (655)
Q Consensus 98 --G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g~t 175 (655)
+.||||+|+........+++++|+++|||+|.+|..|.||||+|+. .++.+++++|+++|++++.+|..|.+
T Consensus 372 g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~------~~n~eivelLLs~GADIN~kD~~G~T 445 (631)
T PHA02792 372 IINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIE------SHSVSLVEWLIDNGADINITTKYGST 445 (631)
T ss_pred CCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHH------cCCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 4699999887766333457899999999999999999999999987 88999999999999999999999999
Q ss_pred Ccccc
Q 006236 176 PVPQL 180 (655)
Q Consensus 176 pl~~l 180 (655)
++..+
T Consensus 446 pL~~A 450 (631)
T PHA02792 446 CIGIC 450 (631)
T ss_pred HHHHH
Confidence 98654
No 68
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.41 E-value=5e-13 Score=146.08 Aligned_cols=141 Identities=20% Similarity=0.359 Sum_probs=122.1
Q ss_pred CchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccC
Q 006236 16 KSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACG 95 (655)
Q Consensus 16 g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d 95 (655)
..-.++.|...++.+.+..+|- .|+++|..+ .+|.|+||-+|...+.+||++|+++| ++||.. |
T Consensus 40 ~sa~~l~A~~~~d~~ev~~ll~-~ga~~~~~n-------------~DglTalhq~~id~~~e~v~~l~e~g-a~Vn~~-d 103 (527)
T KOG0505|consen 40 DSAVFLEACSRGDLEEVRKLLN-RGASPNLCN-------------VDGLTALHQACIDDNLEMVKFLVENG-ANVNAQ-D 103 (527)
T ss_pred chHHHHhccccccHHHHHHHhc-cCCCccccC-------------CccchhHHHHHhcccHHHHHHHHHhc-CCcccc-c
Confidence 3456778888899999998886 788888875 89999999999999999999999999 999998 9
Q ss_pred CCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCC-----------------------------------------
Q 006236 96 SDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYG----------------------------------------- 134 (655)
Q Consensus 96 ~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G----------------------------------------- 134 (655)
..||||||.|+..|+ +.++++|+.+||++-..+.+|
T Consensus 104 ~e~wtPlhaaascg~---~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D 180 (527)
T KOG0505|consen 104 NEGWTPLHAAASCGY---LNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDD 180 (527)
T ss_pred cccCCcchhhccccc---HHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHH
Confidence 999999999999999 999999999988655544444
Q ss_pred ------------------CCccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccCCCCccccc
Q 006236 135 ------------------NKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNIPVPQLS 181 (655)
Q Consensus 135 ------------------~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g~tpl~~l~ 181 (655)
.|.||+|+. .|..++.++||++|.+++++|.+|.+|++.++
T Consensus 181 ~~q~l~~G~~~d~~~~rG~T~lHvAaa------~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA 239 (527)
T KOG0505|consen 181 ARQWLNAGAELDARHARGATALHVAAA------NGYTEVAALLLQAGYSVNIKDYDGWTPLHAAA 239 (527)
T ss_pred HHHHHhccccccccccccchHHHHHHh------hhHHHHHHHHHHhccCcccccccCCCcccHHH
Confidence 456666554 88999999999999999999999999996544
No 69
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.41 E-value=9.2e-13 Score=157.26 Aligned_cols=119 Identities=20% Similarity=0.214 Sum_probs=105.2
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccc
Q 006236 60 GFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVD 139 (655)
Q Consensus 60 d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLh 139 (655)
+.++.++||.||..|+.++++.|++.| +|+|.. |..|+||||+|+..|+ .+++++|+++|+|+|.+|.+|+||||
T Consensus 522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~G-~d~n~~-d~~G~TpLh~Aa~~g~---~~~v~~Ll~~gadin~~d~~G~TpL~ 596 (823)
T PLN03192 522 DPNMASNLLTVASTGNAALLEELLKAK-LDPDIG-DSKGRTPLHIAASKGY---EDCVLVLLKHACNVHIRDANGNTALW 596 (823)
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCC-CCCCCC-CCCCCCHHHHHHHcCh---HHHHHHHHhcCCCCCCcCCCCCCHHH
Confidence 345679999999999999999999999 999998 9999999999999999 99999999999999999999999999
Q ss_pred hhhhc-------------------------cCCCCcChHHHHHHHHhCCCCCCcccccCCCCccccccc
Q 006236 140 LIPVA-------------------------MKSPLHSRKRAIELLLKGDHTIFEEEELVNIPVPQLSKD 183 (655)
Q Consensus 140 lAa~~-------------------------~~~~~~g~~eivelLL~~GAdin~~d~~g~tpl~~l~~~ 183 (655)
+|+.. +.++..++.+++++|+++|++++..|.+|.||+..+...
T Consensus 597 ~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~ 665 (823)
T PLN03192 597 NAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAE 665 (823)
T ss_pred HHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Confidence 87651 122346778889999999999999999999999765544
No 70
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.41 E-value=3.5e-13 Score=151.62 Aligned_cols=155 Identities=19% Similarity=0.230 Sum_probs=135.5
Q ss_pred chHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCC
Q 006236 17 SSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGS 96 (655)
Q Consensus 17 ~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~ 96 (655)
.+-|+.|...+|++.+..+|...+.. ...-+...+....+..|..|.|+||.|+++|+.+++++|+++. +-++.. +.
T Consensus 4 ~qel~~a~ka~d~~tva~ll~~~~~r-~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~e-a~ldl~-d~ 80 (854)
T KOG0507|consen 4 KQELIDACKAGDYDTVALLLSSKKGR-SGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYE-ALLDLC-DT 80 (854)
T ss_pred hhhHHHhhhcccHHHHHHhccCCCCC-CCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcch-hhhhhh-hc
Confidence 35688999999999999999865552 1111333455666777899999999999999999999999998 888887 89
Q ss_pred CCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccCCCC
Q 006236 97 DGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNIP 176 (655)
Q Consensus 97 ~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g~tp 176 (655)
.|.+|||+|++.|+ .++||+||.++..+|+.+..|.||||.|+. .++.+++.+||++|+|.-+.++.+.++
T Consensus 81 kg~~plhlaaw~g~---~e~vkmll~q~d~~na~~~e~~tplhlaaq------hgh~dvv~~Ll~~~adp~i~nns~~t~ 151 (854)
T KOG0507|consen 81 KGILPLHLAAWNGN---LEIVKMLLLQTDILNAVNIENETPLHLAAQ------HGHLEVVFYLLKKNADPFIRNNSKETV 151 (854)
T ss_pred cCcceEEehhhcCc---chHHHHHHhcccCCCcccccCcCccchhhh------hcchHHHHHHHhcCCCccccCcccccH
Confidence 99999999999999 999999999999999999999999999997 999999999999999999999999998
Q ss_pred ccccccc
Q 006236 177 VPQLSKD 183 (655)
Q Consensus 177 l~~l~~~ 183 (655)
+++....
T Consensus 152 ldlA~qf 158 (854)
T KOG0507|consen 152 LDLASRF 158 (854)
T ss_pred HHHHHHh
Confidence 8766554
No 71
>PHA02792 ankyrin-like protein; Provisional
Probab=99.40 E-value=1.4e-12 Score=148.44 Aligned_cols=134 Identities=16% Similarity=0.177 Sum_probs=109.6
Q ss_pred CchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCC--CChHHHHHHHcCCH---HHHHHHHHcCCCcc
Q 006236 16 KSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFE--ERTPIMIAAMFGSV---AVLKYVIETGKVNV 90 (655)
Q Consensus 16 g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~--G~TPLh~AA~~G~~---evvk~LL~~G~aDv 90 (655)
....++.||..++.+.++.|+. +|+++|..+ .. +.||||+|+..... +++++|+++| +|+
T Consensus 339 ~~n~~~~Aa~~gn~eIVelLIs-~GADIN~kD-------------~~g~~~TpLh~A~~n~~~~v~~IlklLIs~G-ADI 403 (631)
T PHA02792 339 HINKYFQKFDNRDPKVVEYILK-NGNVVVEDD-------------DNIINIMPLFPTLSIHESDVLSILKLCKPYI-DDI 403 (631)
T ss_pred cchHHHHHHHcCCHHHHHHHHH-cCCchhhhc-------------CCCCChhHHHHHHHhccHhHHHHHHHHHhcC-Ccc
Confidence 4567888888888887766665 899999875 44 57999998877664 4588999999 999
Q ss_pred ccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCC----CcChHHHHHHHHhCCCCC
Q 006236 91 NRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSP----LHSRKRAIELLLKGDHTI 166 (655)
Q Consensus 91 N~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~----~~g~~eivelLL~~GAdi 166 (655)
|.+ |..|.||||+|+..++ .+++++|+++|+++|.+|..|.||||+|+.....+ .....+++++||++|.++
T Consensus 404 N~k-D~~G~TPLh~Aa~~~n---~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i 479 (631)
T PHA02792 404 NKI-DKHGRSILYYCIESHS---VSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTI 479 (631)
T ss_pred ccc-cccCcchHHHHHHcCC---HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCCh
Confidence 998 9999999999999999 99999999999999999999999999986411110 123357899999999887
Q ss_pred Cc
Q 006236 167 FE 168 (655)
Q Consensus 167 n~ 168 (655)
..
T Consensus 480 ~~ 481 (631)
T PHA02792 480 EC 481 (631)
T ss_pred hH
Confidence 63
No 72
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.38 E-value=2.7e-12 Score=113.90 Aligned_cols=108 Identities=36% Similarity=0.528 Sum_probs=99.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccc
Q 006236 60 GFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVD 139 (655)
Q Consensus 60 d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLh 139 (655)
+.+|.||||+|+..++.+++++|++.+ .+++.. +..|.||||+|+..+. .+++++|++.|++++..+..|.||+|
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li~~~-~~~~~~-~~~g~~~l~~a~~~~~---~~~~~~ll~~~~~~~~~~~~~~~~l~ 78 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLLENG-ADVNAK-DNDGRTPLHLAAKNGH---LEIVKLLLEKGADVNARDKDGNTPLH 78 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCcc-CCCCCcHHHHHHHcCC---HHHHHHHHHcCCCccccCCCCCCHHH
Confidence 477999999999999999999999999 887777 8999999999999999 99999999999999999999999999
Q ss_pred hhhhccCCCCcChHHHHHHHHhCCCCCCcccccCCCCcc
Q 006236 140 LIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNIPVP 178 (655)
Q Consensus 140 lAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g~tpl~ 178 (655)
+|+. .++.+++++|+++|.+++..+..+.+++.
T Consensus 79 ~a~~------~~~~~~~~~L~~~~~~~~~~~~~~~~~l~ 111 (126)
T cd00204 79 LAAR------NGNLDVVKLLLKHGADVNARDKDGRTPLH 111 (126)
T ss_pred HHHH------cCcHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence 9987 78899999999999988888877777663
No 73
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.36 E-value=1.6e-12 Score=124.37 Aligned_cols=109 Identities=17% Similarity=0.180 Sum_probs=97.5
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhh
Q 006236 64 RTPIMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPV 143 (655)
Q Consensus 64 ~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~ 143 (655)
.--+.+|+..+.+..|+.||+...--+|.+ |.+|.||||-|+++|+ .+||+.||..||+++++...|+||||-|++
T Consensus 64 ~rl~lwaae~nrl~eV~~lL~e~an~vNtr-D~D~YTpLHRAaYn~h---~div~~ll~~gAn~~a~T~~GWTPLhSAck 139 (228)
T KOG0512|consen 64 IRLLLWAAEKNRLTEVQRLLSEKANHVNTR-DEDEYTPLHRAAYNGH---LDIVHELLLSGANKEAKTNEGWTPLHSACK 139 (228)
T ss_pred HHHHHHHHhhccHHHHHHHHHhcccccccc-ccccccHHHHHHhcCc---hHHHHHHHHccCCcccccccCccchhhhhc
Confidence 345789999999999999999883357888 9999999999999999 999999999999999999999999999976
Q ss_pred ccCCCCcChHHHHHHHHhCCCCCCcccccCCCCcccccc
Q 006236 144 AMKSPLHSRKRAIELLLKGDHTIFEEEELVNIPVPQLSK 182 (655)
Q Consensus 144 ~~~~~~~g~~eivelLL~~GAdin~~d~~g~tpl~~l~~ 182 (655)
-++.+++-+||++|+|||.......+|++....
T Consensus 140 ------WnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~ 172 (228)
T KOG0512|consen 140 ------WNNFEVAGRLLQHGADVNAQTKGLLTPLHLAAG 172 (228)
T ss_pred ------ccchhHHHHHHhccCcccccccccchhhHHhhc
Confidence 899999999999999999887777777765543
No 74
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.35 E-value=1.2e-12 Score=148.87 Aligned_cols=151 Identities=19% Similarity=0.184 Sum_probs=121.9
Q ss_pred CCchHHHHHHH--hCCH-HHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccc
Q 006236 15 NKSSILLELSA--SDDI-SAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVN 91 (655)
Q Consensus 15 ~g~s~LL~AAa--~gd~-~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN 91 (655)
-|.|.||.+.- .++. +.+..+|+-...-||..- .....+|.||||+|+.+.+.++|++||+.| |||+
T Consensus 142 ~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~---------~~eeY~GqSaLHiAIv~~~~~~V~lLl~~g-ADV~ 211 (782)
T KOG3676|consen 142 TGETLLHKALLNLSDGHNELARVLLEIFPKLINDIY---------TSEEYYGQSALHIAIVNRDAELVRLLLAAG-ADVH 211 (782)
T ss_pred hhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhh---------hhHhhcCcchHHHHHHhccHHHHHHHHHcC-Cchh
Confidence 36788888777 4455 344455543333355431 112478999999999999999999999999 9999
Q ss_pred ccc----------------------CCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCC
Q 006236 92 RAC----------------------GSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPL 149 (655)
Q Consensus 92 ~~~----------------------d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~ 149 (655)
.++ -+.|..||-+||..++ .||+++|+++|||++++|.+|+|.||..+.
T Consensus 212 aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq---~eivrlLl~~gAd~~aqDS~GNTVLH~lVi------ 282 (782)
T KOG3676|consen 212 ARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQ---PEIVRLLLAHGADPNAQDSNGNTVLHMLVI------ 282 (782)
T ss_pred hHhhccccCcccccccccccCCcceeeeccCchHHHHHcCC---HHHHHHHHhcCCCCCccccCCChHHHHHHH------
Confidence 653 1347889999999999 999999999999999999999999999986
Q ss_pred cChHHHHHHHHhCCCC--CCcccccCCCCcccccccC
Q 006236 150 HSRKRAIELLLKGDHT--IFEEEELVNIPVPQLSKDG 184 (655)
Q Consensus 150 ~g~~eivelLL~~GAd--in~~d~~g~tpl~~l~~~~ 184 (655)
....++..++|++|++ ..+.|.+|-||+-.+++.+
T Consensus 283 ~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklG 319 (782)
T KOG3676|consen 283 HFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLG 319 (782)
T ss_pred HHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhh
Confidence 6788999999999999 8889999999997666543
No 75
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.33 E-value=1.9e-12 Score=112.33 Aligned_cols=101 Identities=22% Similarity=0.298 Sum_probs=92.6
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhc
Q 006236 65 TPIMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVA 144 (655)
Q Consensus 65 TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~ 144 (655)
--++|++++|.++-|+..+..| .|||.. ..|+||||||+-+|+ .+++++|+..||+++.+|+.|-|||.-|+.
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g-~nVn~~--~ggR~plhyAAD~GQ---l~ilefli~iGA~i~~kDKygITPLLsAvw- 76 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEG-LNVNEI--YGGRTPLHYAADYGQ---LSILEFLISIGANIQDKDKYGITPLLSAVW- 76 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHcc-ccHHHH--hCCcccchHhhhcch---HHHHHHHHHhccccCCccccCCcHHHHHHH-
Confidence 3478999999999999999999 999976 699999999999999 999999999999999999999999999987
Q ss_pred cCCCCcChHHHHHHHHhCCCCCCcccccCCCCc
Q 006236 145 MKSPLHSRKRAIELLLKGDHTIFEEEELVNIPV 177 (655)
Q Consensus 145 ~~~~~~g~~eivelLL~~GAdin~~d~~g~tpl 177 (655)
.|+.+||++||++||+-.+...+|.+.+
T Consensus 77 -----EGH~~cVklLL~~GAdrt~~~PdG~~~~ 104 (117)
T KOG4214|consen 77 -----EGHRDCVKLLLQNGADRTIHAPDGTALI 104 (117)
T ss_pred -----HhhHHHHHHHHHcCcccceeCCCchhHH
Confidence 9999999999999999998766665544
No 76
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.31 E-value=6.1e-12 Score=143.35 Aligned_cols=138 Identities=22% Similarity=0.266 Sum_probs=118.8
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCC---ccccccc-CCccC------CCCCChHHHHHHHcCCHHHHHHHH
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFDVDEPS---FWYGRRI-GSKKM------GFEERTPIMIAAMFGSVAVLKYVI 83 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~d---lw~g~~~-~~~~~------d~~G~TPLh~AA~~G~~evvk~LL 83 (655)
+.|.|+||.|+.+.|.+.|..||+ .|+||+++. |+...+. .+++. -+.|..||-+||..++.+++++|+
T Consensus 182 Y~GqSaLHiAIv~~~~~~V~lLl~-~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl 260 (782)
T KOG3676|consen 182 YYGQSALHIAIVNRDAELVRLLLA-AGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLL 260 (782)
T ss_pred hcCcchHHHHHHhccHHHHHHHHH-cCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHH
Confidence 679999999999999998887776 999999975 2211111 12111 245899999999999999999999
Q ss_pred HcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCC--CcccCCCCCCccchhhhccCCCCcChHHHHHHHHh
Q 006236 84 ETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASAD--VNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLK 161 (655)
Q Consensus 84 ~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GAD--vn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~ 161 (655)
++| ||+|.+ |..|+|.||..+..-. .++-+++|++|++ ...+|..|.|||-+|++ .|+++|.+.+++
T Consensus 261 ~~g-Ad~~aq-DS~GNTVLH~lVi~~~---~~My~~~L~~ga~~l~~v~N~qgLTPLtLAak------lGk~emf~~ile 329 (782)
T KOG3676|consen 261 AHG-ADPNAQ-DSNGNTVLHMLVIHFV---TEMYDLALELGANALEHVRNNQGLTPLTLAAK------LGKKEMFQHILE 329 (782)
T ss_pred hcC-CCCCcc-ccCCChHHHHHHHHHH---HHHHHHHHhcCCCccccccccCCCChHHHHHH------hhhHHHHHHHHH
Confidence 999 999999 9999999999999866 8999999999999 88999999999999997 999999999998
Q ss_pred CC
Q 006236 162 GD 163 (655)
Q Consensus 162 ~G 163 (655)
..
T Consensus 330 ~~ 331 (782)
T KOG3676|consen 330 RR 331 (782)
T ss_pred hh
Confidence 73
No 77
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.31 E-value=5.2e-12 Score=137.08 Aligned_cols=122 Identities=25% Similarity=0.326 Sum_probs=102.6
Q ss_pred chHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCC
Q 006236 17 SSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGS 96 (655)
Q Consensus 17 ~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~ 96 (655)
.-.||.||..|.++.|.+.+. .=-|+... +.+|.|+||-|+..||.+||++||+.| +|||.. |.
T Consensus 551 LaLLLDaaLeGEldlVq~~i~-ev~DpSqp-------------NdEGITaLHNAiCaghyeIVkFLi~~g-anVNa~-DS 614 (752)
T KOG0515|consen 551 LALLLDAALEGELDLVQRIIY-EVTDPSQP-------------NDEGITALHNAICAGHYEIVKFLIEFG-ANVNAA-DS 614 (752)
T ss_pred HHHHHhhhhcchHHHHHHHHH-hhcCCCCC-------------CccchhHHhhhhhcchhHHHHHHHhcC-CcccCc-cC
Confidence 345678888999999988886 33455555 489999999999999999999999999 999999 99
Q ss_pred CCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccC-CCCCCccchhhhccCCCCcChHHHHHHHHh
Q 006236 97 DGFTALHCAVAGGANSSFEVVKLLLSASADVNCVD-VYGNKPVDLIPVAMKSPLHSRKRAIELLLK 161 (655)
Q Consensus 97 ~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D-~~G~TPLhlAa~~~~~~~~g~~eivelLL~ 161 (655)
+||||||||+.+++ +.+++.|++.|+-|-+.. .++.||..-+- ....|...|.++|..
T Consensus 615 dGWTPLHCAASCNn---v~~ckqLVe~GaavfAsTlSDmeTa~eKCe----e~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 615 DGWTPLHCAASCNN---VPMCKQLVESGAAVFASTLSDMETAAEKCE----EMEEGYDQCSQYLYG 673 (752)
T ss_pred CCCchhhhhhhcCc---hHHHHHHHhccceEEeeecccccchhhhcc----hhhhhHHHHHHHHHH
Confidence 99999999999999 999999999998876544 47788877653 356788899999975
No 78
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.27 E-value=1.5e-11 Score=143.67 Aligned_cols=102 Identities=25% Similarity=0.317 Sum_probs=95.2
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhc
Q 006236 65 TPIMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVA 144 (655)
Q Consensus 65 TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~ 144 (655)
+.||.|+..|+.+++++|++.| +|+|.. |..|.||||+|+..|+ .+++++|+++|+|+|.+|.+|.||||+|+.
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~G-adin~~-d~~G~TpLh~Aa~~g~---~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~- 157 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGG-ADPNCR-DYDGRTPLHIACANGH---VQVVRVLLEFGADPTLLDKDGKTPLELAEE- 157 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCC-CCCCCc-CCCCCcHHHHHHHCCC---HHHHHHHHHCCCCCCCCCCCCCCHHHHHHH-
Confidence 4588999999999999999999 999998 9999999999999999 999999999999999999999999999997
Q ss_pred cCCCCcChHHHHHHHHhC-------CCCCCcccccCCCCc
Q 006236 145 MKSPLHSRKRAIELLLKG-------DHTIFEEEELVNIPV 177 (655)
Q Consensus 145 ~~~~~~g~~eivelLL~~-------GAdin~~d~~g~tpl 177 (655)
.++.+++++|+.+ |++++..+..|.+++
T Consensus 158 -----~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~ 192 (664)
T PTZ00322 158 -----NGFREVVQLLSRHSQCHFELGANAKPDSFTGKPPS 192 (664)
T ss_pred -----CCcHHHHHHHHhCCCcccccCCCCCccccCCCCcc
Confidence 8999999999999 888888777777665
No 79
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.27 E-value=1.6e-11 Score=125.51 Aligned_cols=124 Identities=21% Similarity=0.256 Sum_probs=110.7
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccc
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRA 93 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~ 93 (655)
.+-.++|+++...||.+.+..||.. --.+|.. |..|+++|+.|+..|+.++|++||+.| +|||..
T Consensus 10 d~~~~~Lle~i~Kndt~~a~~LLs~-vr~vn~~-------------D~sGMs~LahAaykGnl~~v~lll~~g-aDvN~~ 74 (396)
T KOG1710|consen 10 DAPKSPLLEAIDKNDTEAALALLST-VRQVNQR-------------DPSGMSVLAHAAYKGNLTLVELLLELG-ADVNDK 74 (396)
T ss_pred cchhhHHHHHHccCcHHHHHHHHHH-hhhhhcc-------------CCCcccHHHHHHhcCcHHHHHHHHHhC-CCcCcc
Confidence 3446899999999999999999963 2337776 589999999999999999999999999 999987
Q ss_pred cCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHh
Q 006236 94 CGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLK 161 (655)
Q Consensus 94 ~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~ 161 (655)
.+..+.||||+|+..|+ .++.++||+.|+.+...+.-|+|+-.+|+- -|+.++|..+-.
T Consensus 75 qhg~~YTpLmFAALSGn---~dvcrllldaGa~~~~vNsvgrTAaqmAAF------VG~H~CV~iINN 133 (396)
T KOG1710|consen 75 QHGTLYTPLMFAALSGN---QDVCRLLLDAGARMYLVNSVGRTAAQMAAF------VGHHECVAIINN 133 (396)
T ss_pred cccccccHHHHHHHcCC---chHHHHHHhccCccccccchhhhHHHHHHH------hcchHHHHHHhc
Confidence 67889999999999999 999999999999999999999999999885 788888877643
No 80
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.25 E-value=2.9e-11 Score=141.22 Aligned_cols=107 Identities=29% Similarity=0.320 Sum_probs=96.9
Q ss_pred hHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCCC
Q 006236 18 SILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGSD 97 (655)
Q Consensus 18 s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~ 97 (655)
..|+++|..|+.+.++.||. .|+++|..+ ..|+||||+||..|+.+++++||+.| +|+|.. |..
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~-~Gadin~~d-------------~~G~TpLh~Aa~~g~~eiv~~LL~~G-advn~~-d~~ 147 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLT-GGADPNCRD-------------YDGRTPLHIACANGHVQVVRVLLEFG-ADPTLL-DKD 147 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHH-CCCCCCCcC-------------CCCCcHHHHHHHCCCHHHHHHHHHCC-CCCCCC-CCC
Confidence 35888999999998777765 899999884 89999999999999999999999999 999998 999
Q ss_pred CChHHHHHHHcCCCChHHHHHHHHhC-------CCCCcccCCCCCCccchhhh
Q 006236 98 GFTALHCAVAGGANSSFEVVKLLLSA-------SADVNCVDVYGNKPVDLIPV 143 (655)
Q Consensus 98 G~TpLH~Aa~~G~~~~~eiVklLL~~-------GADvn~~D~~G~TPLhlAa~ 143 (655)
|.||||+|+..|+ .+++++|+++ |++++..+..|.+|+..+..
T Consensus 148 G~TpLh~A~~~g~---~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~~ 197 (664)
T PTZ00322 148 GKTPLELAEENGF---REVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDSP 197 (664)
T ss_pred CCCHHHHHHHCCc---HHHHHHHHhCCCcccccCCCCCccccCCCCccchhhh
Confidence 9999999999999 9999999998 89999999988888776553
No 81
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.18 E-value=4.7e-11 Score=94.13 Aligned_cols=54 Identities=39% Similarity=0.662 Sum_probs=46.5
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHH
Q 006236 63 ERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLL 121 (655)
Q Consensus 63 G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL 121 (655)
|+||||+||..|+.+++++|++.| +|+|.. |.+|.||||+|+..|+ .+++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~-~din~~-d~~g~t~lh~A~~~g~---~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHG-ADINAQ-DEDGRTPLHYAAKNGN---IDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTT-SGTT-B--TTS--HHHHHHHTT----HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCC-CCCCCC-CCCCCCHHHHHHHccC---HHHHHHHC
Confidence 789999999999999999999999 999999 9999999999999999 99999996
No 82
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.18 E-value=1.4e-11 Score=98.23 Aligned_cols=56 Identities=39% Similarity=0.513 Sum_probs=31.2
Q ss_pred HHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchh
Q 006236 82 VIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLI 141 (655)
Q Consensus 82 LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlA 141 (655)
||+++.+++|.. |..|.||||+|+..|+ .++|++||+.|+|++.+|..|+||||+|
T Consensus 1 LL~~~~~~~n~~-d~~G~T~LH~A~~~g~---~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQ-DKYGNTPLHWAARYGH---SEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT----TTS--HHHHHHHHT----HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCc-CCCCCcHHHHHHHcCc---HHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 566666788888 8889999999999888 8999999988999999999999998886
No 83
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.16 E-value=1.7e-10 Score=112.36 Aligned_cols=115 Identities=30% Similarity=0.395 Sum_probs=102.9
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCC--CChHHHHHHHHhCCC---CCcccCCCC
Q 006236 60 GFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGA--NSSFEVVKLLLSASA---DVNCVDVYG 134 (655)
Q Consensus 60 d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~--~~~~eiVklLL~~GA---Dvn~~D~~G 134 (655)
+..+.+++|.++..+..+++++|+..+ ++++.. +..|.||||+|+..++ ....+++++||+.|+ +.+..|..|
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~-~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g 147 (235)
T COG0666 70 DLDGRLPLHSAASKGDDKIVKLLLASG-ADVNAK-DADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDG 147 (235)
T ss_pred CccccCHHHHHHHcCcHHHHHHHHHcC-CCcccc-cCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCC
Confidence 566899999999999999999999999 999888 9999999999999986 223799999999999 667779999
Q ss_pred CCccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccCCCCcccccc
Q 006236 135 NKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNIPVPQLSK 182 (655)
Q Consensus 135 ~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g~tpl~~l~~ 182 (655)
+||||+|+. .+..+++++|++.|++++.++..|.+++.....
T Consensus 148 ~tpl~~A~~------~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~ 189 (235)
T COG0666 148 NTPLHWAAL------NGDADIVELLLEAGADPNSRNSYGVTALDPAAK 189 (235)
T ss_pred CchhHHHHH------cCchHHHHHHHhcCCCCcccccCCCcchhhhcc
Confidence 999999987 888899999999999999998889888755443
No 84
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.15 E-value=6.5e-11 Score=128.72 Aligned_cols=91 Identities=25% Similarity=0.437 Sum_probs=85.1
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccC
Q 006236 67 IMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMK 146 (655)
Q Consensus 67 Lh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~ 146 (655)
|.-|+..|-+++|..++..- -|+... +..|.|+||.|+..|| .+||++||++|+++|..|.+||||||+|+.
T Consensus 554 LLDaaLeGEldlVq~~i~ev-~DpSqp-NdEGITaLHNAiCagh---yeIVkFLi~~ganVNa~DSdGWTPLHCAAS--- 625 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEV-TDPSQP-NDEGITALHNAICAGH---YEIVKFLIEFGANVNAADSDGWTPLHCAAS--- 625 (752)
T ss_pred HHhhhhcchHHHHHHHHHhh-cCCCCC-CccchhHHhhhhhcch---hHHHHHHHhcCCcccCccCCCCchhhhhhh---
Confidence 45688999999999999887 789888 8999999999999999 999999999999999999999999999997
Q ss_pred CCCcChHHHHHHHHhCCCCCCc
Q 006236 147 SPLHSRKRAIELLLKGDHTIFE 168 (655)
Q Consensus 147 ~~~~g~~eivelLL~~GAdin~ 168 (655)
.++..+++.|++.|+-|..
T Consensus 626 ---CNnv~~ckqLVe~GaavfA 644 (752)
T KOG0515|consen 626 ---CNNVPMCKQLVESGAAVFA 644 (752)
T ss_pred ---cCchHHHHHHHhccceEEe
Confidence 8999999999999998864
No 85
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.09 E-value=9.7e-11 Score=93.42 Aligned_cols=53 Identities=34% Similarity=0.528 Sum_probs=32.9
Q ss_pred hcC-CCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCChHHHHH
Q 006236 38 EKG-FDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCA 105 (655)
Q Consensus 38 ~~G-adIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~A 105 (655)
++| .++|.. |..|.||||+||.+|+.+++++||+.| +|++.+ |..|+||||+|
T Consensus 3 ~~~~~~~n~~-------------d~~G~T~LH~A~~~g~~~~v~~Ll~~g-~d~~~~-d~~G~Tpl~~A 56 (56)
T PF13857_consen 3 EHGPADVNAQ-------------DKYGNTPLHWAARYGHSEVVRLLLQNG-ADPNAK-DKDGQTPLHYA 56 (56)
T ss_dssp ---T--TT----------------TTS--HHHHHHHHT-HHHHHHHHHCT---TT----TTS--HHHH-
T ss_pred ccCcCCCcCc-------------CCCCCcHHHHHHHcCcHHHHHHHHHCc-CCCCCC-cCCCCCHHHhC
Confidence 355 777777 599999999999999999999999888 999999 99999999997
No 86
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.07 E-value=1.8e-10 Score=90.77 Aligned_cols=54 Identities=37% Similarity=0.565 Sum_probs=46.2
Q ss_pred CChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHH
Q 006236 98 GFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLL 160 (655)
Q Consensus 98 G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL 160 (655)
|+|+||+|+..|+ .+++++|++.|+|+|.+|.+|.||||+|+. .++.+++++||
T Consensus 1 g~t~lh~A~~~g~---~~~~~~Ll~~~~din~~d~~g~t~lh~A~~------~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGN---LEIVKLLLEHGADINAQDEDGRTPLHYAAK------NGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT----HHHHHHHHHTTSGTT-B-TTS--HHHHHHH------TT-HHHHHHHH
T ss_pred CChHHHHHHHhCC---HHHHHHHHHCCCCCCCCCCCCCCHHHHHHH------ccCHHHHHHHC
Confidence 6899999999999 999999999999999999999999999997 89999999996
No 87
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.03 E-value=1.6e-10 Score=133.57 Aligned_cols=130 Identities=21% Similarity=0.263 Sum_probs=118.2
Q ss_pred chHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCC
Q 006236 17 SSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGS 96 (655)
Q Consensus 17 ~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~ 96 (655)
..+-|-.|+.|++..++++|+..|++|..++ ..|.+||.+|+..|++.+|..||++. ++|....|.
T Consensus 757 ~~t~LT~acaggh~e~vellv~rganiehrd-------------kkgf~plImaatagh~tvV~~llk~h-a~veaQsdr 822 (2131)
T KOG4369|consen 757 IKTNLTSACAGGHREEVELLVVRGANIEHRD-------------KKGFVPLIMAATAGHITVVQDLLKAH-ADVEAQSDR 822 (2131)
T ss_pred ccccccccccCccHHHHHHHHHhcccccccc-------------cccchhhhhhcccCchHHHHHHHhhh-hhhhhhccc
Confidence 3455667888888888888888999999884 99999999999999999999999999 999998899
Q ss_pred CCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCcc
Q 006236 97 DGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEE 169 (655)
Q Consensus 97 ~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~ 169 (655)
.+.|+|.+||.+|. .++|++||.+|++-..++....|||.+|.. .+..+||++||.+|+.||.+
T Consensus 823 tkdt~lSlacsggr---~~vvelLl~~gankehrnvsDytPlsla~S------ggy~~iI~~llS~GseInSr 886 (2131)
T KOG4369|consen 823 TKDTMLSLACSGGR---TRVVELLLNAGANKEHRNVSDYTPLSLARS------GGYTKIIHALLSSGSEINSR 886 (2131)
T ss_pred ccCceEEEecCCCc---chHHHHHHHhhccccccchhhcCchhhhcC------cchHHHHHHHhhcccccccc
Confidence 99999999999999 999999999999999999999999999976 88999999999999888854
No 88
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=98.94 E-value=2.5e-09 Score=117.74 Aligned_cols=190 Identities=15% Similarity=0.115 Sum_probs=117.6
Q ss_pred CCCChHHHHHHHcCCCChHHHHHHHHhCC-CCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCcccccCC
Q 006236 96 SDGFTALHCAVAGGANSSFEVVKLLLSAS-ADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVN 174 (655)
Q Consensus 96 ~~G~TpLH~Aa~~G~~~~~eiVklLL~~G-ADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~~d~~g~ 174 (655)
.+-+|+|++|+..|. .+++.+++..+ .++|-.--+|.. |+++. ....+..+.+..|+.+++..++.|..|.
T Consensus 56 ~~qR~~~~v~~~~Gs---~~~~~~i~~~~~~e~~~~C~~~~~--~C~~~---g~s~~~~e~~~hL~~~k~~~~~tda~g~ 127 (528)
T KOG1595|consen 56 LNQRRRRPVARRDGS---FNYSPDIYCTKYDEVTGICPDGDE--HCAVL---GRSVGDTERTYHLRYYKTLPCVTDARGN 127 (528)
T ss_pred hccccccchhhhcCc---cccccceeecchhhccccCCCCcc--cchhc---ccccCCcceeEeccccccccCccccCCC
Confidence 456899999999999 99999998765 777776666666 55542 2335778888999999999999998888
Q ss_pred CCccccccc---CcccccccccCCcccccCC---cccc---ccccccccccccccccccCCCCCccccCCCCCCCCCCCC
Q 006236 175 IPVPQLSKD---GTEKKEYPIDVSLPDINNG---VYGT---DDFRMYAFKIKPCSRAYSHDWTECPFVHPGENARRRDPR 245 (655)
Q Consensus 175 tpl~~l~~~---~~~~keypvdlsl~di~~~---~y~s---de~rm~sfKvrpCsrayshDwteCp~~Hp~EnarRRdPr 245 (655)
.+.+.+... +.....-+++ ++... -+.. .+-....+++.-+...-.++.. .+|...+ -|
T Consensus 128 ~~~~v~~~~~~~~~~~~r~~~~----~l~e~~~~~~~~~~e~~~~~~~~~~~y~~Dp~~pdi~--~~ys~De------Fr 195 (528)
T KOG1595|consen 128 CVKNVLHCAFAHGPNDLRPPVE----DLLELQGGSGLPDDEPEVESKLDVTEYPEDPSWPDIN--GIYSSDE------FR 195 (528)
T ss_pred cccCcccccccCCccccccHHH----HHHhcccccCccCCCcccccccccccccCCCCccccc--ccccccc------eE
Confidence 876554311 1111111111 11111 0100 0000111111111111112211 1222222 27
Q ss_pred CCCCCcCCCCCccCCCCCCCCcccccC-CccccccCCcc--cccccccCC--CCCCCCC-CCCCCCCCC
Q 006236 246 KYPYTCVPCPEFRKGACPKGDGCEYAH-GVFESWLHPAQ--YRTRLCKDE--IGCARKV-CFFAHKPEE 308 (655)
Q Consensus 246 ~y~Ys~~~CP~~rkg~C~~Gd~C~yaH-~~~E~~~HP~~--ykt~~C~~~--~~C~~~~-C~faH~~~e 308 (655)
.|.|+...|+.- .|.++..|.|+| |.-...-.|.+ |.+.+|.+| |.|.+|. |.|||+++|
T Consensus 196 My~fKir~C~R~---~shDwteCPf~HpgEkARRRDPRkyhYs~tpCPefrkG~C~rGD~CEyaHgvfE 261 (528)
T KOG1595|consen 196 MYSFKIRRCSRP---RSHDWTECPFAHPGEKARRRDPRKYHYSSTPCPEFRKGSCERGDSCEYAHGVFE 261 (528)
T ss_pred EEeeeecccCCc---cCCCcccCCccCCCcccccCCcccccccCccCcccccCCCCCCCccccccceeh
Confidence 899999998754 467777777777 54445556665 688999999 9999995 999999999
No 89
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.76 E-value=9.1e-09 Score=119.44 Aligned_cols=130 Identities=24% Similarity=0.262 Sum_probs=101.9
Q ss_pred chHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCC
Q 006236 17 SSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGS 96 (655)
Q Consensus 17 ~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~ 96 (655)
+++|- .|+.|++..++.+|+..|.+||.+. + .+-|..|||+|+++|+...++.||+.| .|||.....
T Consensus 858 ytPls-la~Sggy~~iI~~llS~GseInSrt-------g----SklgisPLmlatmngh~~at~~ll~~g-sdiNaqIeT 924 (2131)
T KOG4369|consen 858 YTPLS-LARSGGYTKIIHALLSSGSEINSRT-------G----SKLGISPLMLATMNGHQAATLSLLQPG-SDINAQIET 924 (2131)
T ss_pred cCchh-hhcCcchHHHHHHHhhccccccccc-------c----cccCcchhhhhhhccccHHHHHHhccc-chhcccccc
Confidence 44443 4455555566666666888887753 2 366889999999999999999999999 999987667
Q ss_pred CCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCc
Q 006236 97 DGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFE 168 (655)
Q Consensus 97 ~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~ 168 (655)
+.+|+|-+|+..|. .++|.+||.+.+++..+-..|.|||+-++. .|..++-++||..|+|+|.
T Consensus 925 NrnTaltla~fqgr---~evv~lLLa~~anvehRaktgltplme~As------gGyvdvg~~li~~gad~na 987 (2131)
T KOG4369|consen 925 NRNTALTLALFQGR---PEVVFLLLAAQANVEHRAKTGLTPLMEMAS------GGYVDVGNLLIAAGADTNA 987 (2131)
T ss_pred ccccceeeccccCc---chHHHHHHHHhhhhhhhcccCCcccchhhc------CCccccchhhhhccccccc
Confidence 78888888888888 888888888888888888888888888876 6777777777777777775
No 90
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.70 E-value=5.1e-08 Score=100.15 Aligned_cols=90 Identities=24% Similarity=0.288 Sum_probs=80.2
Q ss_pred ccCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccc
Q 006236 13 LYNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNR 92 (655)
Q Consensus 13 ~~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~ 92 (655)
+-.|.++|.|||-.|+.+.++.+|+ .|+|||..- +..+.||||+||..|+.++.++||+.| +....
T Consensus 42 D~sGMs~LahAaykGnl~~v~lll~-~gaDvN~~q------------hg~~YTpLmFAALSGn~dvcrllldaG-a~~~~ 107 (396)
T KOG1710|consen 42 DPSGMSVLAHAAYKGNLTLVELLLE-LGADVNDKQ------------HGTLYTPLMFAALSGNQDVCRLLLDAG-ARMYL 107 (396)
T ss_pred CCCcccHHHHHHhcCcHHHHHHHHH-hCCCcCccc------------ccccccHHHHHHHcCCchHHHHHHhcc-Ccccc
Confidence 3458999999999999999888876 999999864 678899999999999999999999999 99998
Q ss_pred ccCCCCChHHHHHHHcCCCChHHHHHHH
Q 006236 93 ACGSDGFTALHCAVAGGANSSFEVVKLL 120 (655)
Q Consensus 93 ~~d~~G~TpLH~Aa~~G~~~~~eiVklL 120 (655)
. +.-|+|+-..|+.-|+ .++|..+
T Consensus 108 v-NsvgrTAaqmAAFVG~---H~CV~iI 131 (396)
T KOG1710|consen 108 V-NSVGRTAAQMAAFVGH---HECVAII 131 (396)
T ss_pred c-cchhhhHHHHHHHhcc---hHHHHHH
Confidence 8 8999999999999999 5555543
No 91
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.67 E-value=1.9e-08 Score=108.74 Aligned_cols=93 Identities=29% Similarity=0.366 Sum_probs=81.5
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccc
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRA 93 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~ 93 (655)
+++...+++||..||+..+++++. .|.|++.+| .+.+|+||+||..|+++++|+||+...+|++.+
T Consensus 504 ~~~~i~~~~aa~~GD~~alrRf~l-~g~D~~~~D-------------yD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~k 569 (622)
T KOG0506|consen 504 NDTVINVMYAAKNGDLSALRRFAL-QGMDLETKD-------------YDDRTALHVAAAEGHVEVVKFLLNACKVDPDPK 569 (622)
T ss_pred ccchhhhhhhhhcCCHHHHHHHHH-hcccccccc-------------cccchhheeecccCceeHHHHHHHHHcCCCChh
Confidence 455678899999999999999988 789998884 888999999999999999999999876899887
Q ss_pred cCCCCChHHHHHHHcCCCChHHHHHHHHhCC
Q 006236 94 CGSDGFTALHCAVAGGANSSFEVVKLLLSAS 124 (655)
Q Consensus 94 ~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~G 124 (655)
|..|+|||.-|..+++ .+++++|-++-
T Consensus 570 -DRw~rtPlDdA~~F~h---~~v~k~L~~~~ 596 (622)
T KOG0506|consen 570 -DRWGRTPLDDAKHFKH---KEVVKLLEEAQ 596 (622)
T ss_pred -hccCCCcchHhHhcCc---HHHHHHHHHHh
Confidence 9999999999999999 99999988763
No 92
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.55 E-value=3.2e-08 Score=112.60 Aligned_cols=80 Identities=26% Similarity=0.382 Sum_probs=76.4
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccc
Q 006236 60 GFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVD 139 (655)
Q Consensus 60 d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLh 139 (655)
|..|+|+||+|+..+..+++++||.+| +|++.++-..|+||||-|.++|+ +|++-+||.+|+.+.++|.+|..||.
T Consensus 49 D~~GR~alH~~~S~~k~~~l~wLlqhG-idv~vqD~ESG~taLHRaiyyG~---idca~lLL~~g~SL~i~Dkeglsplq 124 (1267)
T KOG0783|consen 49 DRYGRTALHIAVSENKNSFLRWLLQHG-IDVFVQDEESGYTALHRAIYYGN---IDCASLLLSKGRSLRIKDKEGLSPLQ 124 (1267)
T ss_pred HhhccceeeeeeccchhHHHHHHHhcC-ceeeeccccccchHhhHhhhhch---HHHHHHHHhcCCceEEecccCCCHHH
Confidence 689999999999999999999999999 99999955679999999999999 99999999999999999999999999
Q ss_pred hhhh
Q 006236 140 LIPV 143 (655)
Q Consensus 140 lAa~ 143 (655)
+..+
T Consensus 125 ~~~r 128 (1267)
T KOG0783|consen 125 FLSR 128 (1267)
T ss_pred HHhh
Confidence 8877
No 93
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.51 E-value=9.2e-08 Score=103.62 Aligned_cols=97 Identities=30% Similarity=0.380 Sum_probs=88.1
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhC-CCCCcccCCCCCCcc
Q 006236 60 GFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSA-SADVNCVDVYGNKPV 138 (655)
Q Consensus 60 d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~-GADvn~~D~~G~TPL 138 (655)
+.++...+++||+.|.+..++.+.-.| .|++.+ |.+.+|+||.|+..|+ ++++|+||+. +.|++.+|..|+|||
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~g-~D~~~~-DyD~RTaLHvAAaEG~---v~v~kfl~~~~kv~~~~kDRw~rtPl 577 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQG-MDLETK-DYDDRTALHVAAAEGH---VEVVKFLLNACKVDPDPKDRWGRTPL 577 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHhc-cccccc-ccccchhheeecccCc---eeHHHHHHHHHcCCCChhhccCCCcc
Confidence 466788999999999999999999899 999999 9999999999999999 9999999986 799999999999999
Q ss_pred chhhhccCCCCcChHHHHHHHHhCCCCCC
Q 006236 139 DLIPVAMKSPLHSRKRAIELLLKGDHTIF 167 (655)
Q Consensus 139 hlAa~~~~~~~~g~~eivelLL~~GAdin 167 (655)
+-|.. .++.+++++|-+.-...+
T Consensus 578 DdA~~------F~h~~v~k~L~~~~~~y~ 600 (622)
T KOG0506|consen 578 DDAKH------FKHKEVVKLLEEAQYPYT 600 (622)
T ss_pred hHhHh------cCcHHHHHHHHHHhcccc
Confidence 99976 899999999987654333
No 94
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.48 E-value=2.8e-07 Score=100.27 Aligned_cols=97 Identities=22% Similarity=0.215 Sum_probs=86.1
Q ss_pred CCCCChH------HHHHHHcCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCC
Q 006236 60 GFEERTP------IMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVY 133 (655)
Q Consensus 60 d~~G~TP------Lh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~ 133 (655)
|.+|.|. ||-.++.|+.++.-.||..| |++|...-..|.||||.|+..|+ ..-+++|+-+|||++..|.+
T Consensus 124 DdD~~~~~~LsrQLhasvRt~nlet~LRll~lG-A~~N~~hpekg~TpLHvAAk~Gq---~~Q~ElL~vYGAD~~a~d~~ 199 (669)
T KOG0818|consen 124 DDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLG-AQANFFHPEKGNTPLHVAAKAGQ---ILQAELLAVYGADPGAQDSS 199 (669)
T ss_pred CcchhhHHHHHHHHHHHhhcccHHHHHHHHHcc-cccCCCCcccCCchhHHHHhccc---hhhhhHHhhccCCCCCCCCC
Confidence 5666666 89999999999999999999 99999866789999999999999 88999999999999999999
Q ss_pred CCCccchhhhccCCCCcChHHHHHHHHhCCCCC
Q 006236 134 GNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTI 166 (655)
Q Consensus 134 G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdi 166 (655)
|.||+.+|-. .|+.++.+.|++.-.++
T Consensus 200 GmtP~~~AR~------~gH~~laeRl~e~~y~v 226 (669)
T KOG0818|consen 200 GMTPVDYARQ------GGHHELAERLVEIQYEL 226 (669)
T ss_pred CCcHHHHHHh------cCchHHHHHHHHHHHHH
Confidence 9999999986 88888888887644333
No 95
>KOG1677 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=98.48 E-value=8.8e-08 Score=102.94 Aligned_cols=68 Identities=35% Similarity=0.639 Sum_probs=59.4
Q ss_pred CCCCcCCCCCccC-CCCCC-CCcccccCCccccc--------cCCcccccccccCC---CCCCCC-CCCCCCCCCCcccC
Q 006236 247 YPYTCVPCPEFRK-GACPK-GDGCEYAHGVFESW--------LHPAQYRTRLCKDE---IGCARK-VCFFAHKPEELRPV 312 (655)
Q Consensus 247 y~Ys~~~CP~~rk-g~C~~-Gd~C~yaH~~~E~~--------~HP~~ykt~~C~~~---~~C~~~-~C~faH~~~elr~~ 312 (655)
-.|++..|..+++ |.|++ |++|.|+|+..|+. ..|.+|||++|.+| |.|+|| .|.|+|+..|+++.
T Consensus 128 ~~~kt~lc~~~~~~g~c~y~ge~crfah~~~e~r~~~~~~~~~~~~~~kt~lC~~f~~tG~C~yG~rC~F~H~~~~~~~~ 207 (332)
T KOG1677|consen 128 ERYKTPLCRSFRKSGTCKYRGEQCRFAHGLEELRLPSSENQVGNPPKYKTKLCPKFQKTGLCKYGSRCRFIHGEPEDRAS 207 (332)
T ss_pred ccccCCcceeeecCccccccCchhhhcCCcccccccccchhhcCCCCCCCcCCCccccCCCCCCCCcCeecCCCcccccc
Confidence 3688899998865 89999 99999999988876 13669999999999 999999 59999999999987
Q ss_pred cC
Q 006236 313 YA 314 (655)
Q Consensus 313 ~~ 314 (655)
+.
T Consensus 208 ~~ 209 (332)
T KOG1677|consen 208 NR 209 (332)
T ss_pred cc
Confidence 64
No 96
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.47 E-value=4e-07 Score=100.16 Aligned_cols=121 Identities=22% Similarity=0.257 Sum_probs=104.2
Q ss_pred hHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcc-ccccCC
Q 006236 18 SILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNV-NRACGS 96 (655)
Q Consensus 18 s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDv-N~~~d~ 96 (655)
..|+.++..+|+-.+++.-. .|-++-.+ +.+.+|.||+|+..|+-++|+|||++|+..+ +.. +.
T Consensus 868 eeil~av~~~D~~klqE~h~-~gg~ll~~-------------~~~~~sllh~a~~tg~~eivkyildh~p~elld~~-de 932 (1004)
T KOG0782|consen 868 EEILRAVLSSDLMKLQETHL-NGGSLLIQ-------------GPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMA-DE 932 (1004)
T ss_pred HHHHHHHHhccHHHHHHHHh-cCCceEee-------------CcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHH-hh
Confidence 45899999999988888776 56665555 3788999999999999999999999996554 445 88
Q ss_pred CCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhC
Q 006236 97 DGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKG 162 (655)
Q Consensus 97 ~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~ 162 (655)
.|.|+||-|+..++ ..+..+|++.||.+...|..|.||-.-|-+ .+..+++.+|-..
T Consensus 933 ~get~lhkaa~~~~---r~vc~~lvdagasl~ktd~kg~tp~eraqq------a~d~dlaayle~r 989 (1004)
T KOG0782|consen 933 TGETALHKAACQRN---RAVCQLLVDAGASLRKTDSKGKTPQERAQQ------AGDPDLAAYLESR 989 (1004)
T ss_pred hhhHHHHHHHHhcc---hHHHHHHHhcchhheecccCCCChHHHHHh------cCCchHHHHHhhh
Confidence 99999999999999 999999999999999999999999998875 7888888887653
No 97
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.34 E-value=1.5e-06 Score=94.87 Aligned_cols=88 Identities=19% Similarity=0.242 Sum_probs=77.7
Q ss_pred hHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCCC
Q 006236 18 SILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGSD 97 (655)
Q Consensus 18 s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~ 97 (655)
--||-.+..++.+.+.++|. .|+++|... -..|.||||+||+.|+.--+++|+-+| ||++.. |.+
T Consensus 135 rQLhasvRt~nlet~LRll~-lGA~~N~~h------------pekg~TpLHvAAk~Gq~~Q~ElL~vYG-AD~~a~-d~~ 199 (669)
T KOG0818|consen 135 KQLHSSVRTGNLETCLRLLS-LGAQANFFH------------PEKGNTPLHVAAKAGQILQAELLAVYG-ADPGAQ-DSS 199 (669)
T ss_pred HHHHHHhhcccHHHHHHHHH-cccccCCCC------------cccCCchhHHHHhccchhhhhHHhhcc-CCCCCC-CCC
Confidence 34666778899999999998 899999876 578999999999999999999999999 999999 999
Q ss_pred CChHHHHHHHcCCCChHHHHHHHHhC
Q 006236 98 GFTALHCAVAGGANSSFEVVKLLLSA 123 (655)
Q Consensus 98 G~TpLH~Aa~~G~~~~~eiVklLL~~ 123 (655)
|.||+.+|-..|+ -++.+.|++.
T Consensus 200 GmtP~~~AR~~gH---~~laeRl~e~ 222 (669)
T KOG0818|consen 200 GMTPVDYARQGGH---HELAERLVEI 222 (669)
T ss_pred CCcHHHHHHhcCc---hHHHHHHHHH
Confidence 9999999999999 6666666553
No 98
>PF13606 Ank_3: Ankyrin repeat
Probab=98.27 E-value=8.8e-07 Score=61.86 Aligned_cols=28 Identities=39% Similarity=0.770 Sum_probs=16.6
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCccc
Q 006236 63 ERTPIMIAAMFGSVAVLKYVIETGKVNVN 91 (655)
Q Consensus 63 G~TPLh~AA~~G~~evvk~LL~~G~aDvN 91 (655)
|+||||+||..|+++++++||++| +|+|
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~g-advn 29 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHG-ADVN 29 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcC-CCCC
Confidence 556666666666666666666655 5554
No 99
>PF13606 Ank_3: Ankyrin repeat
Probab=98.26 E-value=1.1e-06 Score=61.42 Aligned_cols=30 Identities=50% Similarity=0.713 Sum_probs=28.3
Q ss_pred CCChHHHHHHHcCCCChHHHHHHHHhCCCCCcc
Q 006236 97 DGFTALHCAVAGGANSSFEVVKLLLSASADVNC 129 (655)
Q Consensus 97 ~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~ 129 (655)
+|+||||+|+..|+ .++|++||++|+|+|.
T Consensus 1 ~G~T~Lh~A~~~g~---~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGN---IEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCC---HHHHHHHHHcCCCCCC
Confidence 58999999999999 9999999999999984
No 100
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.23 E-value=2.9e-06 Score=94.03 Aligned_cols=93 Identities=28% Similarity=0.310 Sum_probs=77.0
Q ss_pred hHHHHHHHhCCHHHHHHHHHhcCCC--CCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccC
Q 006236 18 SILLELSASDDISAFKREIEEKGFD--VDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACG 95 (655)
Q Consensus 18 s~LL~AAa~gd~~~vk~LL~~~Gad--In~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d 95 (655)
.-|+.|.+..|+..+..||. +|.. +|+.. -+.+|+|+||+||..|++.+..+|+=+| +|+-.. |
T Consensus 626 qqLl~A~~~~Dl~t~~lLLA-hg~~~e~~~t~-----------~~~~grt~LHLa~~~gnVvl~QLLiWyg-~dv~~r-d 691 (749)
T KOG0705|consen 626 QQLLRAVAAEDLQTAILLLA-HGSREEVNETC-----------GEGDGRTALHLAARKGNVVLAQLLIWYG-VDVMAR-D 691 (749)
T ss_pred HHHHHHHHHHHHHHHHHHHh-ccCchhhhccc-----------cCCCCcchhhhhhhhcchhHHHHHHHhC-ccceec-c
Confidence 45788888888888887776 6655 44331 2567899999999999999999999888 999988 9
Q ss_pred CCCChHHHHHHHcCCCChHHHHHHHHhCCCCC
Q 006236 96 SDGFTALHCAVAGGANSSFEVVKLLLSASADV 127 (655)
Q Consensus 96 ~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADv 127 (655)
..|+|+|.||-..|. .+++.+||.+|+..
T Consensus 692 a~g~t~l~yar~a~s---qec~d~llq~gcp~ 720 (749)
T KOG0705|consen 692 AHGRTALFYARQAGS---QECIDVLLQYGCPD 720 (749)
T ss_pred cCCchhhhhHhhccc---HHHHHHHHHcCCCc
Confidence 999999999999998 99999999998754
No 101
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.23 E-value=1.6e-06 Score=61.50 Aligned_cols=31 Identities=48% Similarity=0.650 Sum_probs=17.3
Q ss_pred CChHHHHHHHcCCCChHHHHHHHHhCCCCCcccC
Q 006236 98 GFTALHCAVAGGANSSFEVVKLLLSASADVNCVD 131 (655)
Q Consensus 98 G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D 131 (655)
|.||||+|+..|+ .+++++||++|++++.+|
T Consensus 2 G~TpLh~A~~~~~---~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 2 GNTPLHYAAQRGH---PDIVKLLLKHGADINARD 32 (33)
T ss_dssp SBBHHHHHHHTTC---HHHHHHHHHTTSCTTCBC
T ss_pred cccHHHHHHHHHH---HHHHHHHHHCcCCCCCCC
Confidence 5555555555555 555555555555555544
No 102
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.23 E-value=4.6e-07 Score=103.50 Aligned_cols=83 Identities=24% Similarity=0.206 Sum_probs=76.9
Q ss_pred cccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCC-CCCCccchhhhccCCCCcChHHHHHHHHhCCCCCCc
Q 006236 90 VNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDV-YGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFE 168 (655)
Q Consensus 90 vN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~-~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdin~ 168 (655)
+|.+ |..|+|+||+|+..+. ..++++||.+|+|++.+|. .|+||||-|+. .|+++++-+||++|+...+
T Consensus 45 anik-D~~GR~alH~~~S~~k---~~~l~wLlqhGidv~vqD~ESG~taLHRaiy------yG~idca~lLL~~g~SL~i 114 (1267)
T KOG0783|consen 45 ANIK-DRYGRTALHIAVSENK---NSFLRWLLQHGIDVFVQDEESGYTALHRAIY------YGNIDCASLLLSKGRSLRI 114 (1267)
T ss_pred hhHH-Hhhccceeeeeeccch---hHHHHHHHhcCceeeeccccccchHhhHhhh------hchHHHHHHHHhcCCceEE
Confidence 5666 8999999999999998 9999999999999999997 69999999875 9999999999999999999
Q ss_pred ccccCCCCcccccc
Q 006236 169 EEELVNIPVPQLSK 182 (655)
Q Consensus 169 ~d~~g~tpl~~l~~ 182 (655)
+|++|..|+..+.+
T Consensus 115 ~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 115 KDKEGLSPLQFLSR 128 (1267)
T ss_pred ecccCCCHHHHHhh
Confidence 99999999877665
No 103
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.14 E-value=2.9e-06 Score=60.17 Aligned_cols=31 Identities=26% Similarity=0.498 Sum_probs=29.6
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCccccc
Q 006236 62 EERTPIMIAAMFGSVAVLKYVIETGKVNVNRA 93 (655)
Q Consensus 62 ~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~ 93 (655)
+|+||||+|+..|+.+++++||++| +|++.+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~g-a~~~~~ 31 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHG-ADINAR 31 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTT-SCTTCB
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCc-CCCCCC
Confidence 4899999999999999999999999 999987
No 104
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.12 E-value=4.7e-06 Score=92.47 Aligned_cols=92 Identities=24% Similarity=0.296 Sum_probs=79.2
Q ss_pred HHHHHHcCCHHHHHHHHHcCC-Ccccccc-CCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhc
Q 006236 67 IMIAAMFGSVAVLKYVIETGK-VNVNRAC-GSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVA 144 (655)
Q Consensus 67 Lh~AA~~G~~evvk~LL~~G~-aDvN~~~-d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~ 144 (655)
|.-|+...++..+-+||.+|. ..+|..| +.+|+|+||+|+..|+ +.+.++|+=+|+|+-+.|.+|+|+|.||-.
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gn---Vvl~QLLiWyg~dv~~rda~g~t~l~yar~- 703 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGN---VVLAQLLIWYGVDVMARDAHGRTALFYARQ- 703 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcc---hhHHHHHHHhCccceecccCCchhhhhHhh-
Confidence 566777788888999999972 2455444 4577999999999999 999999999999999999999999999986
Q ss_pred cCCCCcChHHHHHHHHhCCCCCC
Q 006236 145 MKSPLHSRKRAIELLLKGDHTIF 167 (655)
Q Consensus 145 ~~~~~~g~~eivelLL~~GAdin 167 (655)
.+..+|+.+||++|.--+
T Consensus 704 -----a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 704 -----AGSQECIDVLLQYGCPDE 721 (749)
T ss_pred -----cccHHHHHHHHHcCCCcc
Confidence 899999999999998654
No 105
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.03 E-value=6.7e-06 Score=90.85 Aligned_cols=88 Identities=26% Similarity=0.308 Sum_probs=72.3
Q ss_pred hHHHHHHHcCCHHHHHHHHHc-CCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhh
Q 006236 65 TPIMIAAMFGSVAVLKYVIET-GKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPV 143 (655)
Q Consensus 65 TPLh~AA~~G~~evvk~LL~~-G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~ 143 (655)
-|||+++.....+-+..++.. -...|+.. |..|+||||+|+..|+ .+.+++|+.+|||+..+|.+|++|||-|+.
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~-D~~g~TpLhlAV~Lg~---~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~ 97 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRR-DPPGRTPLHLAVRLGH---VEAARILLSAGADVSIKNNEGWSPLHEAVS 97 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccc-cCCCCccHHHHHHhcC---HHHHHHHHhcCCCccccccccccHHHHHHH
Confidence 469999988877666554332 22567777 8999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCcChHHHHHHHHhC
Q 006236 144 AMKSPLHSRKRAIELLLKG 162 (655)
Q Consensus 144 ~~~~~~~g~~eivelLL~~ 162 (655)
.|+.+++..+|.+
T Consensus 98 ------~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 98 ------TGNEQIITEVLRH 110 (560)
T ss_pred ------cCCHHHHHHHHHH
Confidence 7888777666653
No 106
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.02 E-value=1.1e-05 Score=93.45 Aligned_cols=127 Identities=19% Similarity=0.145 Sum_probs=101.7
Q ss_pred cCCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccc
Q 006236 14 YNKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRA 93 (655)
Q Consensus 14 ~~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~ 93 (655)
..+.--.|.++..||...+++.|++.... +.+++.+|.-|+++|++|+.+.+.+++++|++++ ..+
T Consensus 23 ~~~e~~fL~a~E~gd~~~V~k~l~~~~~~----------~lninc~d~lGr~al~iai~nenle~~eLLl~~~-~~~--- 88 (822)
T KOG3609|consen 23 NEGEKGFLLAHENGDVPLVAKALEYKAVS----------KLNINCRDPLGRLALHIAIDNENLELQELLLDTS-SEE--- 88 (822)
T ss_pred chhhHHHHHHHHcCChHHHHHHHHhcccc----------ccchhccChHhhhceecccccccHHHHHHHhcCc-ccc---
Confidence 34556688999999999999999876541 1223344689999999999999999999999998 444
Q ss_pred cCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCC----------cccCCCCCCccchhhhccCCCCcChHHHHHHHHhCC
Q 006236 94 CGSDGFTALHCAVAGGANSSFEVVKLLLSASADV----------NCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGD 163 (655)
Q Consensus 94 ~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADv----------n~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~G 163 (655)
.-+|.+|+..|. ..+|++++.+-.+. ...-..+.|||.+||. .++.||+++||++|
T Consensus 89 -----gdALL~aI~~~~---v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh------~NnyEil~~Ll~kg 154 (822)
T KOG3609|consen 89 -----GDALLLAIAVGS---VPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAH------LNNFEILQCLLTRG 154 (822)
T ss_pred -----chHHHHHHHHHH---HHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHH------hcchHHHHHHHHcC
Confidence 248999999998 99999999874332 1223356799999997 89999999999999
Q ss_pred CCCCc
Q 006236 164 HTIFE 168 (655)
Q Consensus 164 Adin~ 168 (655)
+.+..
T Consensus 155 ~~i~~ 159 (822)
T KOG3609|consen 155 HCIPI 159 (822)
T ss_pred CCCCC
Confidence 98864
No 107
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.97 E-value=1.6e-05 Score=87.92 Aligned_cols=87 Identities=23% Similarity=0.392 Sum_probs=73.0
Q ss_pred HHHHHHHhCCHHHHHHHHHhc-CCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCCC
Q 006236 19 ILLELSASDDISAFKREIEEK-GFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGSD 97 (655)
Q Consensus 19 ~LL~AAa~gd~~~vk~LL~~~-GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~ 97 (655)
+||.++...+.+.+.++|... +..|+.. |..|+||||+|+..|+.+.++.|+..| +|+..+ +..
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~-------------D~~g~TpLhlAV~Lg~~~~a~~Ll~a~-Adv~~k-N~~ 87 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRR-------------DPPGRTPLHLAVRLGHVEAARILLSAG-ADVSIK-NNE 87 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccc-------------cCCCCccHHHHHHhcCHHHHHHHHhcC-CCcccc-ccc
Confidence 377778888888888766533 4446666 588999999999999999999999999 999999 999
Q ss_pred CChHHHHHHHcCCCChHHHHHHHHhC
Q 006236 98 GFTALHCAVAGGANSSFEVVKLLLSA 123 (655)
Q Consensus 98 G~TpLH~Aa~~G~~~~~eiVklLL~~ 123 (655)
|+++||-|+..|+ .+++..+|.+
T Consensus 88 gWs~L~EAv~~g~---~q~i~~vlr~ 110 (560)
T KOG0522|consen 88 GWSPLHEAVSTGN---EQIITEVLRH 110 (560)
T ss_pred cccHHHHHHHcCC---HHHHHHHHHH
Confidence 9999999999999 7776666654
No 108
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.73 E-value=3.7e-05 Score=85.06 Aligned_cols=102 Identities=19% Similarity=0.267 Sum_probs=83.5
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCC--CcccCCCCCCccchhhhc
Q 006236 67 IMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASAD--VNCVDVYGNKPVDLIPVA 144 (655)
Q Consensus 67 Lh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GAD--vn~~D~~G~TPLhlAa~~ 144 (655)
|..|+..+.+--+..+-..| .++-.. +.+..|.||+|+..|+ -+||+|||++|.. ++..|..|.|+||-|+.
T Consensus 870 il~av~~~D~~klqE~h~~g-g~ll~~-~~~~~sllh~a~~tg~---~eivkyildh~p~elld~~de~get~lhkaa~- 943 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNG-GSLLIQ-GPDHCSLLHYAAKTGN---GEIVKYILDHGPSELLDMADETGETALHKAAC- 943 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcC-CceEee-CcchhhHHHHHHhcCC---hHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHH-
Confidence 45566666543333344455 677777 8899999999999999 9999999999853 57788999999999986
Q ss_pred cCCCCcChHHHHHHHHhCCCCCCcccccCCCCccc
Q 006236 145 MKSPLHSRKRAIELLLKGDHTIFEEEELVNIPVPQ 179 (655)
Q Consensus 145 ~~~~~~g~~eivelLL~~GAdin~~d~~g~tpl~~ 179 (655)
.++..+.++|++.|+.+...|..|++|-..
T Consensus 944 -----~~~r~vc~~lvdagasl~ktd~kg~tp~er 973 (1004)
T KOG0782|consen 944 -----QRNRAVCQLLVDAGASLRKTDSKGKTPQER 973 (1004)
T ss_pred -----hcchHHHHHHHhcchhheecccCCCChHHH
Confidence 888999999999999999999999998533
No 109
>COG5063 CTH1 CCCH-type Zn-finger protein [General function prediction only]
Probab=97.73 E-value=1.8e-05 Score=82.03 Aligned_cols=68 Identities=32% Similarity=0.615 Sum_probs=55.2
Q ss_pred CCCc--CCCCCc-cCCCCCC---CCccccc---CCccccccC--CcccccccccCC---CCCCCC-CCCCCCCCCCcccC
Q 006236 248 PYTC--VPCPEF-RKGACPK---GDGCEYA---HGVFESWLH--PAQYRTRLCKDE---IGCARK-VCFFAHKPEELRPV 312 (655)
Q Consensus 248 ~Ys~--~~CP~~-rkg~C~~---Gd~C~ya---H~~~E~~~H--P~~ykt~~C~~~---~~C~~~-~C~faH~~~elr~~ 312 (655)
-|.+ ..|..| ++|.|++ |+.|+|+ ||--|+-.. -..|||.+|.+| |.|+|| .|-|+|+.+++...
T Consensus 225 L~kt~~~lc~~ft~kg~~p~~~sG~~~q~a~~~HGlN~l~~k~k~~~frTePcinwe~sGyc~yg~Rc~F~hgd~~~ie~ 304 (351)
T COG5063 225 LYKTNPELCESFTRKGTCPYWISGVKCQFACRGHGLNELKSKKKKQNFRTEPCINWEKSGYCPYGLRCCFKHGDDSDIEM 304 (351)
T ss_pred hhcCCHHHhhccCcCCCCccccccccccccccccccccccccccccccccCCccchhhcccCccccccccccCChhhccc
Confidence 3555 789988 5699999 9999999 996555332 335999999999 999998 59999999999877
Q ss_pred cCC
Q 006236 313 YAS 315 (655)
Q Consensus 313 ~~~ 315 (655)
|.-
T Consensus 305 ~~~ 307 (351)
T COG5063 305 YEE 307 (351)
T ss_pred ccc
Confidence 753
No 110
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.71 E-value=2.5e-05 Score=92.44 Aligned_cols=78 Identities=29% Similarity=0.389 Sum_probs=74.6
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccch
Q 006236 61 FEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDL 140 (655)
Q Consensus 61 ~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhl 140 (655)
..|.|+||.|+..|...++++||++| +++|.. +..|+||||.+...|+ ...+.+|++.||+.++.|.+|.+||++
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~g-a~vn~~-d~~g~~plh~~~~~g~---~~~~~~ll~~~a~~~a~~~~~~~~l~~ 728 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNG-ADVNAL-DSKGRTPLHHATASGH---TSIACLLLKRGADPNAFDPDGKLPLDI 728 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcC-Ccchhh-hccCCCcchhhhhhcc---cchhhhhccccccccccCccCcchhhH
Confidence 56899999999999999999999999 999999 9999999999999999 999999999999999999999999999
Q ss_pred hhh
Q 006236 141 IPV 143 (655)
Q Consensus 141 Aa~ 143 (655)
|..
T Consensus 729 a~~ 731 (785)
T KOG0521|consen 729 AME 731 (785)
T ss_pred Hhh
Confidence 975
No 111
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.67 E-value=0.00011 Score=78.48 Aligned_cols=86 Identities=30% Similarity=0.262 Sum_probs=71.8
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhh
Q 006236 64 RTPIMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPV 143 (655)
Q Consensus 64 ~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~ 143 (655)
.--|..||+.|.++.|++|++.| ++||.+ |.....||.+|+..|| .++||+||++||-...-..+|...+.-|.
T Consensus 37 f~elceacR~GD~d~v~~LVetg-vnVN~v-D~fD~spL~lAsLcGH---e~vvklLLenGAiC~rdtf~G~RC~YgaL- 110 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETG-VNVNAV-DRFDSSPLYLASLCGH---EDVVKLLLENGAICSRDTFDGDRCHYGAL- 110 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhC-CCcchh-hcccccHHHHHHHcCc---HHHHHHHHHcCCcccccccCcchhhhhhh-
Confidence 45689999999999999999999 999999 9999999999999999 99999999999987766667877644332
Q ss_pred ccCCCCcChHHHHHHHHhCC
Q 006236 144 AMKSPLHSRKRAIELLLKGD 163 (655)
Q Consensus 144 ~~~~~~~g~~eivelLL~~G 163 (655)
+..|-++||++.
T Consensus 111 --------nd~IR~mllsyd 122 (516)
T KOG0511|consen 111 --------NDRIRRMLLSYD 122 (516)
T ss_pred --------hHHHHHHHHHHH
Confidence 345566677653
No 112
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.62 E-value=0.0002 Score=70.40 Aligned_cols=69 Identities=25% Similarity=0.244 Sum_probs=60.9
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCC
Q 006236 60 GFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDV 132 (655)
Q Consensus 60 d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~ 132 (655)
|..|+|+||.||..|+.+++.||+..|-++|... |..+.+++.+|-..|. .++|+.|.+.-.+-...+.
T Consensus 9 D~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~-d~ssldaaqlaek~g~---~~fvh~lfe~~~ets~p~n 77 (223)
T KOG2384|consen 9 DAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVT-DESSLDAAQLAEKGGA---QAFVHSLFENDRETSHPMN 77 (223)
T ss_pred hhhcchHHHHHhhhcchhHHHHHhccCccccccc-ccccchHHHHHHhcCh---HHHHHHHHHHhccCCCccc
Confidence 5999999999999999999999999997788876 9999999999999999 9999999988655544443
No 113
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.37 E-value=0.00029 Score=69.28 Aligned_cols=70 Identities=27% Similarity=0.305 Sum_probs=63.3
Q ss_pred CccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCC-CCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhCCCCC
Q 006236 88 VNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSAS-ADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTI 166 (655)
Q Consensus 88 aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~G-ADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~GAdi 166 (655)
.+||.. |..|||||++|+..|+ .+.|.||+.+| +++...|..|.+++.+|-+ .|..+++++|.+.-.+-
T Consensus 3 ~~in~r-D~fgWTalmcaa~eg~---~eavsyllgrg~a~vgv~d~ssldaaqlaek------~g~~~fvh~lfe~~~et 72 (223)
T KOG2384|consen 3 GNINAR-DAFGWTALMCAAMEGS---NEAVSYLLGRGVAFVGVTDESSLDAAQLAEK------GGAQAFVHSLFENDRET 72 (223)
T ss_pred CCccch-hhhcchHHHHHhhhcc---hhHHHHHhccCcccccccccccchHHHHHHh------cChHHHHHHHHHHhccC
Confidence 688988 9999999999999999 99999999999 9999999999999999976 89999999999874443
Q ss_pred C
Q 006236 167 F 167 (655)
Q Consensus 167 n 167 (655)
.
T Consensus 73 s 73 (223)
T KOG2384|consen 73 S 73 (223)
T ss_pred C
Confidence 3
No 114
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.26 E-value=0.00023 Score=84.35 Aligned_cols=92 Identities=22% Similarity=0.221 Sum_probs=63.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCc------ccCCC
Q 006236 60 GFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVN------CVDVY 133 (655)
Q Consensus 60 d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn------~~D~~ 133 (655)
|.+|.-.+|++|..| .+..-+|+......++++ |..|+||||||+..|+ ..++..|++.|++.+ ..+-.
T Consensus 605 d~d~qgV~hfca~lg-~ewA~ll~~~~~~ai~i~-D~~G~tpL~wAa~~G~---e~l~a~l~~lga~~~~~tdps~~~p~ 679 (975)
T KOG0520|consen 605 DRDGQGVIHFCAALG-YEWAFLPISADGVAIDIR-DRNGWTPLHWAAFRGR---EKLVASLIELGADPGAVTDPSPETPG 679 (975)
T ss_pred cccCCChhhHhhhcC-CceeEEEEeecccccccc-cCCCCcccchHhhcCH---HHHHHHHHHhccccccccCCCCCCCC
Confidence 466677777755544 444444444333888888 8999999999999998 888888888776543 23345
Q ss_pred CCCccchhhhccCCCCcChHHHHHHHHhC
Q 006236 134 GNKPVDLIPVAMKSPLHSRKRAIELLLKG 162 (655)
Q Consensus 134 G~TPLhlAa~~~~~~~~g~~eivelLL~~ 162 (655)
|.|+..+|.. +++..+.-+|-+.
T Consensus 680 g~ta~~la~s------~g~~gia~~lse~ 702 (975)
T KOG0520|consen 680 GKTAADLARA------NGHKGIAGYLSEK 702 (975)
T ss_pred CCchhhhhhc------ccccchHHHHhhh
Confidence 7788777765 6666666666544
No 115
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.14 E-value=0.0018 Score=69.51 Aligned_cols=86 Identities=23% Similarity=0.363 Sum_probs=68.1
Q ss_pred CchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccC
Q 006236 16 KSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACG 95 (655)
Q Consensus 16 g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d 95 (655)
.+--|.+|+..||.+.++.+++ .|.+||.+| .....||.+|+..||.++||+||++| |-...- .
T Consensus 36 ~f~elceacR~GD~d~v~~LVe-tgvnVN~vD-------------~fD~spL~lAsLcGHe~vvklLLenG-AiC~rd-t 99 (516)
T KOG0511|consen 36 PFGELCEACRAGDVDRVRYLVE-TGVNVNAVD-------------RFDSSPLYLASLCGHEDVVKLLLENG-AICSRD-T 99 (516)
T ss_pred chHHHHHHhhcccHHHHHHHHH-hCCCcchhh-------------cccccHHHHHHHcCcHHHHHHHHHcC-Cccccc-c
Confidence 3677899999999999999998 999999996 66789999999999999999999999 766543 4
Q ss_pred CCCChHHHHHHHcCCCChHHHHHHHHhC
Q 006236 96 SDGFTALHCAVAGGANSSFEVVKLLLSA 123 (655)
Q Consensus 96 ~~G~TpLH~Aa~~G~~~~~eiVklLL~~ 123 (655)
.+|.. -||++.+. .|-++||.+
T Consensus 100 f~G~R-C~YgaLnd-----~IR~mllsy 121 (516)
T KOG0511|consen 100 FDGDR-CHYGALND-----RIRRMLLSY 121 (516)
T ss_pred cCcch-hhhhhhhH-----HHHHHHHHH
Confidence 45554 45666543 355566654
No 116
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=96.98 E-value=0.00052 Score=81.53 Aligned_cols=97 Identities=20% Similarity=0.213 Sum_probs=80.1
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHc-CCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHh-CCCCCcccCCCCCCc
Q 006236 60 GFEERTPIMIAAMFGSVAVLKYVIET-GKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLS-ASADVNCVDVYGNKP 137 (655)
Q Consensus 60 d~~G~TPLh~AA~~G~~evvk~LL~~-G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~-~GADvn~~D~~G~TP 137 (655)
...|+|-||+++..+...+++.+++. + .....- +.+|...+|+++..| .++.-+|+. .|..++.+|.+|+||
T Consensus 571 ~~r~~lllhL~a~~lyawLie~~~e~~~-~~~~el-d~d~qgV~hfca~lg----~ewA~ll~~~~~~ai~i~D~~G~tp 644 (975)
T KOG0520|consen 571 NFRDMLLLHLLAELLYAWLIEKVIEWAG-SGDLEL-DRDGQGVIHFCAALG----YEWAFLPISADGVAIDIRDRNGWTP 644 (975)
T ss_pred CCcchHHHHHHHHHhHHHHHHHHhcccc-cCchhh-cccCCChhhHhhhcC----CceeEEEEeecccccccccCCCCcc
Confidence 57799999999999999999999996 5 333333 677778888876666 466666654 589999999999999
Q ss_pred cchhhhccCCCCcChHHHHHHHHhCCCCCCc
Q 006236 138 VDLIPVAMKSPLHSRKRAIELLLKGDHTIFE 168 (655)
Q Consensus 138 LhlAa~~~~~~~~g~~eivelLL~~GAdin~ 168 (655)
||+|+. .|+.+++..|++.|++...
T Consensus 645 L~wAa~------~G~e~l~a~l~~lga~~~~ 669 (975)
T KOG0520|consen 645 LHWAAF------RGREKLVASLIELGADPGA 669 (975)
T ss_pred cchHhh------cCHHHHHHHHHHhcccccc
Confidence 999986 9999999999999988773
No 117
>KOG2494 consensus C3H1-type Zn-finger protein [Transcription]
Probab=96.95 E-value=0.00027 Score=74.48 Aligned_cols=64 Identities=30% Similarity=0.622 Sum_probs=52.6
Q ss_pred CCCCCccCCCCCCCCc-ccccCCccccccCCcccccccccCC--CCCCCCCCCCCCCCCCcccCcCCCC
Q 006236 252 VPCPEFRKGACPKGDG-CEYAHGVFESWLHPAQYRTRLCKDE--IGCARKVCFFAHKPEELRPVYASTG 317 (655)
Q Consensus 252 ~~CP~~rkg~C~~Gd~-C~yaH~~~E~~~HP~~ykt~~C~~~--~~C~~~~C~faH~~~elr~~~~~~~ 317 (655)
+.|++|.++.|.+||. |.|+|...-+- -..-+-..|-|+ |.|.|..|.|+|.+.+|+..+--+|
T Consensus 38 eVCReF~rn~C~R~d~~CkfaHP~~~~~--V~~g~v~aC~Ds~kgrCsR~nCkylHpp~hlkdql~ing 104 (331)
T KOG2494|consen 38 EVCREFLRNTCSRGDRECKFAHPPKNCQ--VSNGRVIACFDSQKGRCSRENCKYLHPPQHLKDQLKING 104 (331)
T ss_pred HHHHHHHhccccCCCccccccCCCCCCC--ccCCeEEEEeccccCccCcccceecCCChhhhhhhhhcc
Confidence 4899999999999998 99999966332 233466789999 9999999999999999887665554
No 118
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=96.80 E-value=0.0014 Score=77.96 Aligned_cols=88 Identities=23% Similarity=0.271 Sum_probs=70.8
Q ss_pred CCchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccc
Q 006236 15 NKSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRAC 94 (655)
Q Consensus 15 ~g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~ 94 (655)
.|.+.||.+...++.. ..++|++.|++||..+ ..|+||||.+...|+...+..|++.| ++.+..
T Consensus 655 ~~~s~lh~a~~~~~~~-~~e~ll~~ga~vn~~d-------------~~g~~plh~~~~~g~~~~~~~ll~~~-a~~~a~- 718 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSG-AVELLLQNGADVNALD-------------SKGRTPLHHATASGHTSIACLLLKRG-ADPNAF- 718 (785)
T ss_pred cccchhhhhhccchHH-HHHHHHhcCCcchhhh-------------ccCCCcchhhhhhcccchhhhhcccc-cccccc-
Confidence 3456666655555555 4555566999999985 99999999999999999999999999 999999
Q ss_pred CCCCChHHHHHHHcCCCChHHHHHHHH
Q 006236 95 GSDGFTALHCAVAGGANSSFEVVKLLL 121 (655)
Q Consensus 95 d~~G~TpLH~Aa~~G~~~~~eiVklLL 121 (655)
+.+|.++|++|....+ .+++-+|.
T Consensus 719 ~~~~~~~l~~a~~~~~---~d~~~l~~ 742 (785)
T KOG0521|consen 719 DPDGKLPLDIAMEAAN---ADIVLLLR 742 (785)
T ss_pred CccCcchhhHHhhhcc---ccHHHHHh
Confidence 9999999999988755 55554443
No 119
>PF00642 zf-CCCH: Zinc finger C-x8-C-x5-C-x3-H type (and similar); InterPro: IPR000571 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents C-x8-C-x5-C-x3-H (CCCH) type Zinc finger (Znf) domains. Proteins containing CCCH Znf domains include Znf proteins from eukaryotes involved in cell cycle or growth phase-related regulation, e.g. human TIS11B (butyrate response factor 1), a probable regulatory protein involved in regulating the response to growth factors, and the mouse TTP growth factor-inducible nuclear protein, which has the same function. The mouse TTP protein is induced by growth factors. Another protein containing this domain is the human splicing factor U2AF 35kDa subunit, which plays a critical role in both constitutive and enhancer-dependent splicing by mediating essential protein-protein interactions and protein-RNA interactions required for 3' splice site selection. It has been shown that different CCCH-type Znf proteins interact with the 3'-untranslated region of various mRNA [, ]. This type of Znf is very often present in two copies. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003676 nucleic acid binding, 0008270 zinc ion binding; PDB: 1M9O_A 1RGO_A 2CQE_A 2FC6_A 2D9M_A 2E5S_A 2RHK_C 2D9N_A 3D2S_A 3D2Q_C ....
Probab=96.53 E-value=0.00057 Score=46.58 Aligned_cols=22 Identities=41% Similarity=0.714 Sum_probs=11.8
Q ss_pred cccccccCC---CCCCCCC-CCCCCC
Q 006236 284 YRTRLCKDE---IGCARKV-CFFAHK 305 (655)
Q Consensus 284 ykt~~C~~~---~~C~~~~-C~faH~ 305 (655)
||+.+|+.| |.|++|. |.|+|+
T Consensus 1 ~k~~~C~~f~~~g~C~~G~~C~f~H~ 26 (27)
T PF00642_consen 1 YKTKLCRFFMRTGTCPFGDKCRFAHG 26 (27)
T ss_dssp TTSSB-HHHHHTS--TTGGGSSSBSS
T ss_pred CccccChhhccCCccCCCCCcCccCC
Confidence 466666665 6666663 666665
No 120
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.80 E-value=0.019 Score=63.79 Aligned_cols=63 Identities=27% Similarity=0.202 Sum_probs=54.2
Q ss_pred HHHHHHHHHcCCCccccc-----cCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhh
Q 006236 76 VAVLKYVIETGKVNVNRA-----CGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIP 142 (655)
Q Consensus 76 ~evvk~LL~~G~aDvN~~-----~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa 142 (655)
...|++|.+++ ++.|.. .+..-.|+||+|+..|. .++|.+||+.|+|+..+|..|.||..++.
T Consensus 404 p~~ie~lken~-lsgnf~~~pe~~~~ltsT~LH~aa~qg~---~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENL-LSGNFDVTPEANDYLTSTFLHYAAAQGA---RKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHhcC-CcccccccccccccccchHHHHHHhcch---HHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 56788888888 777643 14456899999999999 99999999999999999999999999863
No 121
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.79 E-value=0.015 Score=37.10 Aligned_cols=27 Identities=33% Similarity=0.680 Sum_probs=16.2
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCcc
Q 006236 63 ERTPIMIAAMFGSVAVLKYVIETGKVNV 90 (655)
Q Consensus 63 G~TPLh~AA~~G~~evvk~LL~~G~aDv 90 (655)
|.||||+|+..++.+++++|++.+ .++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~-~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKG-ADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC-CCC
Confidence 456666666666666666666655 443
No 122
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.59 E-value=0.021 Score=36.35 Aligned_cols=29 Identities=59% Similarity=0.812 Sum_probs=26.1
Q ss_pred CCChHHHHHHHcCCCChHHHHHHHHhCCCCCc
Q 006236 97 DGFTALHCAVAGGANSSFEVVKLLLSASADVN 128 (655)
Q Consensus 97 ~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn 128 (655)
.|.|+||+|+..++ .+++++|++.+.+++
T Consensus 1 ~~~~~l~~~~~~~~---~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGN---LEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCC---HHHHHHHHHcCCCCC
Confidence 47899999999999 999999999988765
No 123
>KOG1677 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=95.51 E-value=0.009 Score=64.35 Aligned_cols=61 Identities=36% Similarity=0.677 Sum_probs=47.4
Q ss_pred CCCCCc-cCCCCCCCCcccccCCcccc----------ccCCcccccccccCC---CCCCC-CC-CCCCCCCCCcccC
Q 006236 252 VPCPEF-RKGACPKGDGCEYAHGVFES----------WLHPAQYRTRLCKDE---IGCAR-KV-CFFAHKPEELRPV 312 (655)
Q Consensus 252 ~~CP~~-rkg~C~~Gd~C~yaH~~~E~----------~~HP~~ykt~~C~~~---~~C~~-~~-C~faH~~~elr~~ 312 (655)
..|-.+ +.+.|.++..|.+.|...+. -.-|..|||.+|+.| |.|.| +. |.|||+.+|+|..
T Consensus 87 ~~~~~~~~~~~~~~~s~~~~~~p~~~~~~~~~~~~~~~~~p~~~kt~lc~~~~~~g~c~y~ge~crfah~~~e~r~~ 163 (332)
T KOG1677|consen 87 GDCSAYLRTGVCGYGSSCRYNHPDLRLRPRPVRRSRGERKPERYKTPLCRSFRKSGTCKYRGEQCRFAHGLEELRLP 163 (332)
T ss_pred cccccccccCCCCCCCCCCccCcccccccCCccccccccCcccccCCcceeeecCccccccCchhhhcCCccccccc
Confidence 356554 34789888888888885222 223778999999999 99999 85 9999999999954
No 124
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.47 E-value=0.035 Score=61.71 Aligned_cols=85 Identities=14% Similarity=0.141 Sum_probs=66.7
Q ss_pred HHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCChH
Q 006236 22 ELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTA 101 (655)
Q Consensus 22 ~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~Tp 101 (655)
.....+....++..|.++++++|..- -....+.---|+||+|+..|..++|.+||+.| +|+..+ |..|+||
T Consensus 396 s~lkk~~~p~~ie~lken~lsgnf~~-------~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg-~Dp~~k-d~~Grtp 466 (591)
T KOG2505|consen 396 SRLKKKPEPDSIEALKENLLSGNFDV-------TPEANDYLTSTFLHYAAAQGARKCVKYFLEEG-CDPSTK-DGAGRTP 466 (591)
T ss_pred HHHhccCchhHHHHHHhcCCcccccc-------cccccccccchHHHHHHhcchHHHHHHHHHhc-CCchhc-ccCCCCc
Confidence 33445677788888888999988752 22233566789999999999999999999999 999999 9999999
Q ss_pred HHHHHHcCCCChHHHHHHHH
Q 006236 102 LHCAVAGGANSSFEVVKLLL 121 (655)
Q Consensus 102 LH~Aa~~G~~~~~eiVklLL 121 (655)
..++. + .||-..++
T Consensus 467 y~ls~---n---kdVk~~F~ 480 (591)
T KOG2505|consen 467 YSLSA---N---KDVKSIFI 480 (591)
T ss_pred ccccc---c---HHHHHHHH
Confidence 99987 2 45544444
No 125
>PF00642 zf-CCCH: Zinc finger C-x8-C-x5-C-x3-H type (and similar); InterPro: IPR000571 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents C-x8-C-x5-C-x3-H (CCCH) type Zinc finger (Znf) domains. Proteins containing CCCH Znf domains include Znf proteins from eukaryotes involved in cell cycle or growth phase-related regulation, e.g. human TIS11B (butyrate response factor 1), a probable regulatory protein involved in regulating the response to growth factors, and the mouse TTP growth factor-inducible nuclear protein, which has the same function. The mouse TTP protein is induced by growth factors. Another protein containing this domain is the human splicing factor U2AF 35kDa subunit, which plays a critical role in both constitutive and enhancer-dependent splicing by mediating essential protein-protein interactions and protein-RNA interactions required for 3' splice site selection. It has been shown that different CCCH-type Znf proteins interact with the 3'-untranslated region of various mRNA [, ]. This type of Znf is very often present in two copies. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003676 nucleic acid binding, 0008270 zinc ion binding; PDB: 1M9O_A 1RGO_A 2CQE_A 2FC6_A 2D9M_A 2E5S_A 2RHK_C 2D9N_A 3D2S_A 3D2Q_C ....
Probab=95.26 E-value=0.0037 Score=42.56 Aligned_cols=25 Identities=48% Similarity=1.109 Sum_probs=19.1
Q ss_pred CCcCCCCCccC-CCCCCCCcccccCC
Q 006236 249 YTCVPCPEFRK-GACPKGDGCEYAHG 273 (655)
Q Consensus 249 Ys~~~CP~~rk-g~C~~Gd~C~yaH~ 273 (655)
|+..+|+.|.+ |.|++|+.|.|+|+
T Consensus 1 ~k~~~C~~f~~~g~C~~G~~C~f~H~ 26 (27)
T PF00642_consen 1 YKTKLCRFFMRTGTCPFGDKCRFAHG 26 (27)
T ss_dssp TTSSB-HHHHHTS--TTGGGSSSBSS
T ss_pred CccccChhhccCCccCCCCCcCccCC
Confidence 56778998866 99999999999997
No 126
>COG5063 CTH1 CCCH-type Zn-finger protein [General function prediction only]
Probab=95.08 E-value=0.026 Score=59.21 Aligned_cols=65 Identities=22% Similarity=0.444 Sum_probs=52.0
Q ss_pred CCCCCCcCCCCCccC-CCCCCCCcccccCCcccc---ccCC-cccccccccCC---CCCCCC-CCCCCCCCCCc
Q 006236 245 RKYPYTCVPCPEFRK-GACPKGDGCEYAHGVFES---WLHP-AQYRTRLCKDE---IGCARK-VCFFAHKPEEL 309 (655)
Q Consensus 245 r~y~Ys~~~CP~~rk-g~C~~Gd~C~yaH~~~E~---~~HP-~~ykt~~C~~~---~~C~~~-~C~faH~~~el 309 (655)
.+-.|++++|-++.+ |.|++|-.|.|.||..+. ..|+ ..|+...|+.+ |.|+++ .|-|.|...-+
T Consensus 268 k~~~frTePcinwe~sGyc~yg~Rc~F~hgd~~~ie~~~~~~~~y~~~~crt~~~~g~~p~g~~~c~~~dkkn~ 341 (351)
T COG5063 268 KKQNFRTEPCINWEKSGYCPYGLRCCFKHGDDSDIEMYEEASLGYLDGPCRTRAKGGAFPSGGAVCKSFDKKNL 341 (351)
T ss_pred cccccccCCccchhhcccCccccccccccCChhhccccccccccccccccccccccCccCCCCchhhccccchh
Confidence 345799999999977 899999999999998665 3455 36899999988 899965 67788876544
No 127
>smart00356 ZnF_C3H1 zinc finger.
Probab=95.07 E-value=0.015 Score=38.87 Aligned_cols=24 Identities=42% Similarity=0.987 Sum_probs=12.2
Q ss_pred CcCCCCCccCCCCCCCCcccccCC
Q 006236 250 TCVPCPEFRKGACPKGDGCEYAHG 273 (655)
Q Consensus 250 s~~~CP~~rkg~C~~Gd~C~yaH~ 273 (655)
+...|+.|..|.|.+|+.|.|.|.
T Consensus 3 k~~~C~~~~~g~C~~g~~C~~~H~ 26 (27)
T smart00356 3 KTELCKFFKRGYCPYGDRCKFAHP 26 (27)
T ss_pred CCCcCcCccCCCCCCCCCcCCCCc
Confidence 334455554455555555555553
No 128
>smart00356 ZnF_C3H1 zinc finger.
Probab=94.57 E-value=0.029 Score=37.48 Aligned_cols=23 Identities=43% Similarity=0.607 Sum_probs=20.0
Q ss_pred cccccccCC--CCCCCCC-CCCCCCC
Q 006236 284 YRTRLCKDE--IGCARKV-CFFAHKP 306 (655)
Q Consensus 284 ykt~~C~~~--~~C~~~~-C~faH~~ 306 (655)
+|+.+|++| |.|+++. |.|+|..
T Consensus 2 ~k~~~C~~~~~g~C~~g~~C~~~H~~ 27 (27)
T smart00356 2 YKTELCKFFKRGYCPYGDRCKFAHPL 27 (27)
T ss_pred CCCCcCcCccCCCCCCCCCcCCCCcC
Confidence 688899998 8999884 9999973
No 129
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=94.48 E-value=0.07 Score=62.88 Aligned_cols=89 Identities=16% Similarity=0.192 Sum_probs=65.1
Q ss_pred CchHHHHHHHhCCHHHHHHHHHhcCCCCCCCCcccccccCCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcc-----
Q 006236 16 KSSILLELSASDDISAFKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVNV----- 90 (655)
Q Consensus 16 g~s~LL~AAa~gd~~~vk~LL~~~GadIn~~dlw~g~~~~~~~~d~~G~TPLh~AA~~G~~evvk~LL~~G~aDv----- 90 (655)
|.+.|+.|..+.+.+. +++|.+++.++ . .+|.+|+..|..++|++|+.+. .+.
T Consensus 62 Gr~al~iai~nenle~-~eLLl~~~~~~--g------------------dALL~aI~~~~v~~VE~ll~~~-~~~~~~~~ 119 (822)
T KOG3609|consen 62 GRLALHIAIDNENLEL-QELLLDTSSEE--G------------------DALLLAIAVGSVPLVELLLVHF-VDAPYLER 119 (822)
T ss_pred hhhceecccccccHHH-HHHHhcCcccc--c------------------hHHHHHHHHHHHHHHHHHHhcc-cccchhcc
Confidence 5666666666666555 44554454443 2 4899999999999999999885 322
Q ss_pred ----ccccCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCCcc
Q 006236 91 ----NRACGSDGFTALHCAVAGGANSSFEVVKLLLSASADVNC 129 (655)
Q Consensus 91 ----N~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADvn~ 129 (655)
+...-.-+.|||.+||..++ .||+++||.+|+.+..
T Consensus 120 ~~d~~~~~ft~ditPliLAAh~Nn---yEil~~Ll~kg~~i~~ 159 (822)
T KOG3609|consen 120 SGDANSPHFTPDITPLMLAAHLNN---FEILQCLLTRGHCIPI 159 (822)
T ss_pred ccccCcccCCCCccHHHHHHHhcc---hHHHHHHHHcCCCCCC
Confidence 22223457899999999999 9999999999988753
No 130
>PF14608 zf-CCCH_2: Zinc finger C-x8-C-x5-C-x3-H type
Probab=92.79 E-value=0.073 Score=33.34 Aligned_cols=18 Identities=33% Similarity=0.652 Sum_probs=15.7
Q ss_pred cccCCCCCCCC-CCCCCCC
Q 006236 288 LCKDEIGCARK-VCFFAHK 305 (655)
Q Consensus 288 ~C~~~~~C~~~-~C~faH~ 305 (655)
+|++|.+|+++ .|.|+|.
T Consensus 1 ~Ck~~~~C~~~~~C~f~HP 19 (19)
T PF14608_consen 1 PCKFGPNCTNGDNCPFSHP 19 (19)
T ss_pred CCcCcCCCCCCCcCccCCc
Confidence 59999999988 7999994
No 131
>KOG2333 consensus Uncharacterized conserved protein [General function prediction only]
Probab=90.44 E-value=0.12 Score=57.68 Aligned_cols=57 Identities=26% Similarity=0.461 Sum_probs=39.8
Q ss_pred CcCCCCCccCC---CCCCCCcccccCCcccccc--CCcccccccccCC---CCCCCCC-CCCC--CCCCC
Q 006236 250 TCVPCPEFRKG---ACPKGDGCEYAHGVFESWL--HPAQYRTRLCKDE---IGCARKV-CFFA--HKPEE 308 (655)
Q Consensus 250 s~~~CP~~rkg---~C~~Gd~C~yaH~~~E~~~--HP~~ykt~~C~~~---~~C~~~~-C~fa--H~~~e 308 (655)
.-..||..-.| .|.+||+|.|-|+..-+.. -|.+- --|.-| |.|++|+ |.|+ |-..|
T Consensus 75 ~n~LCPsli~g~~~~C~f~d~Crf~HDi~ayLatK~~Dig--~~Cp~f~s~G~Cp~G~~CRFl~aHld~~ 142 (614)
T KOG2333|consen 75 QNRLCPSLIQGDISKCSFGDNCRFVHDIEAYLATKAPDIG--PSCPVFESLGFCPYGFKCRFLGAHLDIE 142 (614)
T ss_pred hhccChHhhcCCCccCcccccccccccHHHHHhccCcccC--CccceeeccccCCccceeehhhcccCcc
Confidence 45689988665 8999999999999543322 13332 236655 9999997 9996 54444
No 132
>KOG1040 consensus Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit) [RNA processing and modification]
Probab=89.52 E-value=0.2 Score=54.02 Aligned_cols=26 Identities=38% Similarity=0.842 Sum_probs=22.0
Q ss_pred CCCcCCCCCccCCCCCCCCcccccCC
Q 006236 248 PYTCVPCPEFRKGACPKGDGCEYAHG 273 (655)
Q Consensus 248 ~Ys~~~CP~~rkg~C~~Gd~C~yaH~ 273 (655)
.+..+.|..+..|.|..||.|.|.|.
T Consensus 74 ~~~~~vcK~~l~glC~kgD~C~Flhe 99 (325)
T KOG1040|consen 74 SRGKVVCKHWLRGLCKKGDQCEFLHE 99 (325)
T ss_pred cCCceeehhhhhhhhhccCcCcchhh
Confidence 45567899999999999999999994
No 133
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=88.65 E-value=1.5 Score=44.97 Aligned_cols=95 Identities=15% Similarity=0.166 Sum_probs=68.4
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCC---CccccccCCCCChHHHHHHHcCCCChHHHHHHHHhCC-CCCccc---CCCCC
Q 006236 63 ERTPIMIAAMFGSVAVLKYVIETGK---VNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSAS-ADVNCV---DVYGN 135 (655)
Q Consensus 63 G~TPLh~AA~~G~~evvk~LL~~G~---aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~G-ADvn~~---D~~G~ 135 (655)
-.++|-+|...+..+++-+||.+-. .|+-.. ..+.--+-|+..... ....|+++.|.+| +++|.. -..|.
T Consensus 179 A~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~--~~~~ydieY~LS~h~-a~~kvL~~Fi~~Glv~vN~~F~~~NSGd 255 (284)
T PF06128_consen 179 AHQAMWLSIGNAKEDVALYLLSKFNFTKQDVASM--EKELYDIEYLLSEHS-ASYKVLEYFINRGLVDVNKKFQKVNSGD 255 (284)
T ss_pred HHHHHHHHhcccHHHHHHHHHhhcceecchhhhc--CcchhhHHHHHhhcC-CcHHHHHHHHhccccccchhhhccCCcc
Confidence 4578888888888999999998631 233221 223334555544322 2478999999998 888844 55799
Q ss_pred CccchhhhccCCCCcChHHHHHHHHhCCCCC
Q 006236 136 KPVDLIPVAMKSPLHSRKRAIELLLKGDHTI 166 (655)
Q Consensus 136 TPLhlAa~~~~~~~~g~~eivelLL~~GAdi 166 (655)
|-|+-|++ .++.+++.+||++||-.
T Consensus 256 tMLDNA~K------y~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 256 TMLDNAMK------YKNSEMIAFLLKYGAIS 280 (284)
T ss_pred hHHHhHHh------cCcHHHHHHHHHcCccc
Confidence 99999987 89999999999999844
No 134
>KOG1492 consensus C3H1-type Zn-finger protein [General function prediction only]
Probab=88.52 E-value=0.23 Score=50.07 Aligned_cols=47 Identities=30% Similarity=0.740 Sum_probs=37.6
Q ss_pred CCCCCccCCCCCCCCcccccCCccccccCCcccccccccCC--CCCCCCCCCCCCC
Q 006236 252 VPCPEFRKGACPKGDGCEYAHGVFESWLHPAQYRTRLCKDE--IGCARKVCFFAHK 305 (655)
Q Consensus 252 ~~CP~~rkg~C~~Gd~C~yaH~~~E~~~HP~~ykt~~C~~~--~~C~~~~C~faH~ 305 (655)
.+||.|..|.|.....|...|-- .|. +.--|++| |.|+.+.|.|.|-
T Consensus 234 ticpkflngrcnkaedcnlshel-----dpr--ripacryfllgkcnnpncryvhi 282 (377)
T KOG1492|consen 234 TICPKFLNGRCNKAEDCNLSHEL-----DPR--RIPACRYFLLGKCNNPNCRYVHI 282 (377)
T ss_pred ccChHHhcCccCchhcCCccccc-----Ccc--ccchhhhhhhccCCCCCceEEEE
Confidence 58999999999999999999862 231 22259999 9999989999884
No 135
>KOG3702 consensus Nuclear polyadenylated RNA binding protein [RNA processing and modification]
Probab=88.50 E-value=0.64 Score=53.65 Aligned_cols=41 Identities=24% Similarity=0.514 Sum_probs=28.7
Q ss_pred cccccCCccc----cccCCccc----ccccccCCCCCCCCCCCCCCCCC
Q 006236 267 GCEYAHGVFE----SWLHPAQY----RTRLCKDEIGCARKVCFFAHKPE 307 (655)
Q Consensus 267 ~C~yaH~~~E----~~~HP~~y----kt~~C~~~~~C~~~~C~faH~~~ 307 (655)
.|.|.|+.-- +-.-|..+ -+.+|+++++|..-.|.|.|-..
T Consensus 598 DC~~sH~~~~~pvq~t~ip~~~~~~ti~~~CrY~pnCrnm~C~F~HPk~ 646 (681)
T KOG3702|consen 598 DCNYSHAGRRIPVQPTRIPPPFPGGTIRGLCRYRPNCRNMQCKFYHPKT 646 (681)
T ss_pred cCcccccCCCCCCccccCCCCCCCCCccccceeccCcCCccccccCCcc
Confidence 6889997322 12223333 46789999999999999999644
No 136
>KOG1040 consensus Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit) [RNA processing and modification]
Probab=79.37 E-value=1.5 Score=47.51 Aligned_cols=73 Identities=30% Similarity=0.512 Sum_probs=49.4
Q ss_pred cCCCCCccccCCCCCCCCCCCCCCCCCcC-CCCCc-cCCCCCCCCcccccCCccccccCCcccccccccCC--CCCCCC-
Q 006236 224 SHDWTECPFVHPGENARRRDPRKYPYTCV-PCPEF-RKGACPKGDGCEYAHGVFESWLHPAQYRTRLCKDE--IGCARK- 298 (655)
Q Consensus 224 shDwteCp~~Hp~EnarRRdPr~y~Ys~~-~CP~~-rkg~C~~Gd~C~yaH~~~E~~~HP~~ykt~~C~~~--~~C~~~- 298 (655)
+.-.+.|.|.|..+ ++.- .|-.| ..|.|..+.+|.|-|+.. ..+-+.|+.+ |.|+.+
T Consensus 88 C~kgD~C~Flhe~~-----------~~k~rec~ff~~~g~c~~~~~c~y~h~dp-------qt~~k~c~~~~~g~c~~g~ 149 (325)
T KOG1040|consen 88 CKKGDQCEFLHEYD-----------LTKMRECKFFSLFGECTNGKDCPYLHGDP-------QTAIKKCKWYKEGFCRGGP 149 (325)
T ss_pred hhccCcCcchhhhh-----------hcccccccccccccccccccCCcccCCCh-------hhhhhccchhhhccCCCcc
Confidence 34456788888532 1111 34444 347899999999999865 4566678877 888866
Q ss_pred CCCCCCCCCCcccCcC
Q 006236 299 VCFFAHKPEELRPVYA 314 (655)
Q Consensus 299 ~C~faH~~~elr~~~~ 314 (655)
.|.+.|-...+.+.|.
T Consensus 150 ~c~~~h~~~~~c~~y~ 165 (325)
T KOG1040|consen 150 SCKKRHERKVLCPPYN 165 (325)
T ss_pred hhhhhhhcccCCCchh
Confidence 5999998886666554
No 137
>COG5084 YTH1 Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]
Probab=78.34 E-value=1.8 Score=45.83 Aligned_cols=54 Identities=24% Similarity=0.514 Sum_probs=43.4
Q ss_pred CCCcCCCCCccCCCCCCCCcccccCCccccccCCcccccccccCC---CCCCCC-CCCCCCCC
Q 006236 248 PYTCVPCPEFRKGACPKGDGCEYAHGVFESWLHPAQYRTRLCKDE---IGCARK-VCFFAHKP 306 (655)
Q Consensus 248 ~Ys~~~CP~~rkg~C~~Gd~C~yaH~~~E~~~HP~~ykt~~C~~~---~~C~~~-~C~faH~~ 306 (655)
-+..+.|+.|..|.|+.+..|.|.|+. -..|+ -.-.|+.| |.|..+ .|-+.|..
T Consensus 101 ~~s~V~c~~~~~g~c~s~~~c~~lh~~--d~~~s---~~~~c~~Fs~~G~cs~g~~c~~~h~d 158 (285)
T COG5084 101 LSSSVVCKFFLRGLCKSGFSCEFLHEY--DLRSS---QGPPCRSFSLKGSCSSGPSCGYSHID 158 (285)
T ss_pred ccCCcccchhccccCcCCCccccccCC--Ccccc---cCCCcccccccceeccCCCCCccccC
Confidence 578889999999999999999999982 12222 25579998 999976 69999984
No 138
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=77.50 E-value=3.8 Score=42.11 Aligned_cols=51 Identities=33% Similarity=0.348 Sum_probs=44.4
Q ss_pred CCHHHHHHHHHcCCCccccc--cCCCCChHHHHHHHcCCCChHHHHHHHHhCCCCC
Q 006236 74 GSVAVLKYVIETGKVNVNRA--CGSDGFTALHCAVAGGANSSFEVVKLLLSASADV 127 (655)
Q Consensus 74 G~~evvk~LL~~G~aDvN~~--~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADv 127 (655)
.+..++++.|+.|-+++|.+ .-..|.|-|.-|..+++ .+++.+||++||-.
T Consensus 228 a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~---~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 228 ASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKN---SEMIAFLLKYGAIS 280 (284)
T ss_pred CcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCc---HHHHHHHHHcCccc
Confidence 46789999999998899853 24689999999999999 99999999999843
No 139
>COG5252 Uncharacterized conserved protein, contains CCCH-type Zn-finger protein [General function prediction only]
Probab=76.34 E-value=0.42 Score=48.67 Aligned_cols=59 Identities=34% Similarity=0.631 Sum_probs=42.8
Q ss_pred CcCCCCCccCCCCCCCCcccccCCccccc--c-------------------CCcccccccccCC------------CCCC
Q 006236 250 TCVPCPEFRKGACPKGDGCEYAHGVFESW--L-------------------HPAQYRTRLCKDE------------IGCA 296 (655)
Q Consensus 250 s~~~CP~~rkg~C~~Gd~C~yaH~~~E~~--~-------------------HP~~ykt~~C~~~------------~~C~ 296 (655)
+++.|-.|..+.|..|+.|.|+|+..|-. - .|.+.--+.|++| =.|+
T Consensus 84 K~~vcalF~~~~c~kg~~ckF~h~~ee~r~~eK~DLYsDvRd~~ed~pl~krP~intd~VCkffieA~e~GkYgw~W~CP 163 (299)
T COG5252 84 KTVVCALFLNKTCAKGDACKFAHGKEEARKTEKPDLYSDVRDKEEDVPLGKRPWINTDRVCKFFIEAMESGKYGWGWTCP 163 (299)
T ss_pred hhHHHHHhccCccccCchhhhhcchHHHhhhcccchhhhhhhhhccCCcccCCCCChhHHHHHHHHHHhcCCccceeeCC
Confidence 44578889889999999999999943321 1 1545555668876 2499
Q ss_pred CC--CCCCCCCCCC
Q 006236 297 RK--VCFFAHKPEE 308 (655)
Q Consensus 297 ~~--~C~faH~~~e 308 (655)
.| .|.|.|..-+
T Consensus 164 ng~~~C~y~H~Lp~ 177 (299)
T COG5252 164 NGNMRCSYIHKLPD 177 (299)
T ss_pred CCCceeeeeeccCc
Confidence 77 4999998655
No 140
>KOG2185 consensus Predicted RNA-processing protein, contains G-patch domain [RNA processing and modification]
Probab=72.88 E-value=1.7 Score=47.74 Aligned_cols=37 Identities=27% Similarity=0.371 Sum_probs=30.2
Q ss_pred cccCCcccccccccCC--CCCCCC-CCCCCCC----CCCcccCc
Q 006236 277 SWLHPAQYRTRLCKDE--IGCARK-VCFFAHK----PEELRPVY 313 (655)
Q Consensus 277 ~~~HP~~ykt~~C~~~--~~C~~~-~C~faH~----~~elr~~~ 313 (655)
+++||..-...+|++| |.|+.+ .|.|-|+ .++||+..
T Consensus 131 lfl~PTh~sMkpC~ffLeg~CRF~enCRfSHG~~V~lsslr~yq 174 (486)
T KOG2185|consen 131 LFLTPTHESMKPCKFFLEGRCRFGENCRFSHGLDVPLSSLRNYQ 174 (486)
T ss_pred EeecCcchhhccchHhhccccccCcccccccCcccchhhcccCC
Confidence 4678888889999999 999987 5999999 45677543
No 141
>KOG1763 consensus Uncharacterized conserved protein, contains CCCH-type Zn-finger [General function prediction only]
Probab=71.38 E-value=0.71 Score=48.53 Aligned_cols=25 Identities=40% Similarity=1.064 Sum_probs=22.1
Q ss_pred CcCCCCCccCCCCCCCCcccccCCc
Q 006236 250 TCVPCPEFRKGACPKGDGCEYAHGV 274 (655)
Q Consensus 250 s~~~CP~~rkg~C~~Gd~C~yaH~~ 274 (655)
..+.|-.|..|.|..|+.|-|+|+-
T Consensus 91 KSvvCafFk~g~C~KG~kCKFsHdl 115 (343)
T KOG1763|consen 91 KSVVCAFFKQGTCTKGDKCKFSHDL 115 (343)
T ss_pred hHHHHHHHhccCCCCCCcccccchH
Confidence 4568999999999999999999984
No 142
>COG5084 YTH1 Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]
Probab=58.11 E-value=83 Score=33.65 Aligned_cols=76 Identities=29% Similarity=0.607 Sum_probs=48.3
Q ss_pred ccccccccccccCCCCCccccCCCCCCCCCCCCCCCCCcCCCCCc-cCCCCCCCCcccccCCccccccCCcccccccccC
Q 006236 213 AFKIKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYTCVPCPEF-RKGACPKGDGCEYAHGVFESWLHPAQYRTRLCKD 291 (655)
Q Consensus 213 sfKvrpCsrayshDwteCp~~Hp~EnarRRdPr~y~Ys~~~CP~~-rkg~C~~Gd~C~yaH~~~E~~~HP~~ykt~~C~~ 291 (655)
.|+...|..+. .|.+.|... ++. . -...|..| ..|.|..|-.|.|.|.. |.. .-..|..
T Consensus 109 ~~~~g~c~s~~-----~c~~lh~~d------~~~-s-~~~~c~~Fs~~G~cs~g~~c~~~h~d------p~~-~~~~~~~ 168 (285)
T COG5084 109 FFLRGLCKSGF-----SCEFLHEYD------LRS-S-QGPPCRSFSLKGSCSSGPSCGYSHID------PDS-FAGNCDQ 168 (285)
T ss_pred hhccccCcCCC-----ccccccCCC------ccc-c-cCCCcccccccceeccCCCCCccccC------ccc-ccccccc
Confidence 33444454443 677777432 111 1 34578888 67999999999999984 322 1223444
Q ss_pred C-----CCCCCC-CCCCCCCCCC
Q 006236 292 E-----IGCARK-VCFFAHKPEE 308 (655)
Q Consensus 292 ~-----~~C~~~-~C~faH~~~e 308 (655)
+ +.|+.+ .|.|-|+..-
T Consensus 169 ~~~~~~~f~p~g~~c~~~H~~~~ 191 (285)
T COG5084 169 YSGATYGFCPLGASCKFSHTLKR 191 (285)
T ss_pred cCcccccccCCCCcccccccccc
Confidence 4 679877 5999998753
No 143
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=56.64 E-value=29 Score=34.74 Aligned_cols=45 Identities=16% Similarity=0.213 Sum_probs=28.6
Q ss_pred HHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHh
Q 006236 102 LHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLK 161 (655)
Q Consensus 102 LH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~ 161 (655)
|.+|+..|- ...|.-.|++|.+++. ++|-.|+. .++.+|+.+++.
T Consensus 147 l~~a~~kgl---l~F~letlkygg~~~~------~vls~Av~------ynhRkIL~yfi~ 191 (192)
T PF03158_consen 147 LEKAAAKGL---LPFVLETLKYGGNVDI------IVLSQAVK------YNHRKILDYFIR 191 (192)
T ss_pred HHHHHHCCC---HHHHHHHHHcCCcccH------HHHHHHHH------hhHHHHHHHhhc
Confidence 556666666 6666666667666653 55666655 666777766653
No 144
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=55.46 E-value=22 Score=29.91 Aligned_cols=48 Identities=13% Similarity=0.255 Sum_probs=39.8
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHhC
Q 006236 64 RTPIMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLSA 123 (655)
Q Consensus 64 ~TPLh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~ 123 (655)
...|..|+.-|+.++++.+++.+ .++ ...|..|+..-+ -+++++|++.
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~--~~~-------~~~l~~AI~~H~---n~i~~~l~~~ 54 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKN--KPD-------NDCLEYAIKSHN---NEIADWLIEN 54 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHh--ccH-------HHHHHHHHHHhh---HHHHHHHHHh
Confidence 35689999999999999999876 222 246999999888 9999999976
No 145
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=42.56 E-value=22 Score=29.85 Aligned_cols=47 Identities=19% Similarity=0.406 Sum_probs=37.3
Q ss_pred hHHHHHHHcCCCChHHHHHHHHhCCCCCcccCCCCCCccchhhhccCCCCcChHHHHHHHHhC
Q 006236 100 TALHCAVAGGANSSFEVVKLLLSASADVNCVDVYGNKPVDLIPVAMKSPLHSRKRAIELLLKG 162 (655)
Q Consensus 100 TpLH~Aa~~G~~~~~eiVklLL~~GADvn~~D~~G~TPLhlAa~~~~~~~~g~~eivelLL~~ 162 (655)
.-|.+|+.+|+ .|+++.+++.+ .++ ...+..|+. ..+.++++.|++.
T Consensus 8 ~tl~~Ai~GGN---~eII~~c~~~~-~~~------~~~l~~AI~------~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGN---FEIINICLKKN-KPD------NDCLEYAIK------SHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCC---HHHHHHHHHHh-ccH------HHHHHHHHH------HhhHHHHHHHHHh
Confidence 46899999999 99999999765 222 345788876 7888999999875
No 146
>KOG1492 consensus C3H1-type Zn-finger protein [General function prediction only]
Probab=42.10 E-value=14 Score=37.50 Aligned_cols=51 Identities=27% Similarity=0.656 Sum_probs=39.0
Q ss_pred cCCCCCcc-CCCCCCCCcccccCCccccccCCcccccccccCC--CCCCCC-CCCCCCCCCCcc
Q 006236 251 CVPCPEFR-KGACPKGDGCEYAHGVFESWLHPAQYRTRLCKDE--IGCARK-VCFFAHKPEELR 310 (655)
Q Consensus 251 ~~~CP~~r-kg~C~~Gd~C~yaH~~~E~~~HP~~ykt~~C~~~--~~C~~~-~C~faH~~~elr 310 (655)
.+.|..+- .|.|..|..|.|-|-. .+...|..| |.|+.. .|-..|..+-.|
T Consensus 206 avycryynangicgkgaacrfvhep---------trkticpkflngrcnkaedcnlsheldprr 260 (377)
T KOG1492|consen 206 AVYCRYYNANGICGKGAACRFVHEP---------TRKTICPKFLNGRCNKAEDCNLSHELDPRR 260 (377)
T ss_pred eeEEEEecCCCcccCCceeeeeccc---------cccccChHHhcCccCchhcCCcccccCccc
Confidence 34566554 4789999999998862 345579988 999976 599999887766
No 147
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=41.60 E-value=62 Score=38.01 Aligned_cols=38 Identities=21% Similarity=0.401 Sum_probs=21.8
Q ss_pred ccccccccC-C-CCCCCCC---CC-CCCCCCCcccCcCCCCCCC
Q 006236 283 QYRTRLCKD-E-IGCARKV---CF-FAHKPEELRPVYASTGSAM 320 (655)
Q Consensus 283 ~ykt~~C~~-~-~~C~~~~---C~-faH~~~elr~~~~~~~~~~ 320 (655)
=+||+.|.+ | ..|...+ |- +-|.-+.++..+...|...
T Consensus 203 gfrC~~C~~KfHq~Cs~~vp~~C~~~~~~~~~~~~~~~~~~~~~ 246 (678)
T KOG0193|consen 203 GFRCQTCGYKFHQSCSPRVPTSCVNPDHLRQLLVFEFPAVGGIH 246 (678)
T ss_pred ccccCCCCCccccccCCCCCCCCCCcchHhhhhhhccccccccc
Confidence 357888887 4 7787553 65 4444444544444445544
No 148
>KOG2494 consensus C3H1-type Zn-finger protein [Transcription]
Probab=39.03 E-value=20 Score=38.69 Aligned_cols=55 Identities=31% Similarity=0.635 Sum_probs=38.5
Q ss_pred ccccccccccccCCCCCccccCCCCCCCCCCCCCCCCCcCCCCCccCCCCCCCCcccccCCcccc
Q 006236 213 AFKIKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYTCVPCPEFRKGACPKGDGCEYAHGVFES 277 (655)
Q Consensus 213 sfKvrpCsrayshDwteCp~~Hp~EnarRRdPr~y~Ys~~~CP~~rkg~C~~Gd~C~yaH~~~E~ 277 (655)
.|...-|+|.- .+|.|+|+.++- .--+-...-|-++.+|.|.+. +|-|.|+.-++
T Consensus 42 eF~rn~C~R~d----~~CkfaHP~~~~-----~V~~g~v~aC~Ds~kgrCsR~-nCkylHpp~hl 96 (331)
T KOG2494|consen 42 EFLRNTCSRGD----RECKFAHPPKNC-----QVSNGRVIACFDSQKGRCSRE-NCKYLHPPQHL 96 (331)
T ss_pred HHHhccccCCC----ccccccCCCCCC-----CccCCeEEEEeccccCccCcc-cceecCCChhh
Confidence 45566687764 569999998752 122333447899999999984 59999987443
No 149
>COG5152 Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers [General function prediction only]
Probab=38.17 E-value=13 Score=37.27 Aligned_cols=29 Identities=24% Similarity=0.613 Sum_probs=24.4
Q ss_pred CCCCcCCCCCccC-CCCCCCCcccccCCcc
Q 006236 247 YPYTCVPCPEFRK-GACPKGDGCEYAHGVF 275 (655)
Q Consensus 247 y~Ys~~~CP~~rk-g~C~~Gd~C~yaH~~~ 275 (655)
..|-+..|..++. |.|.|||.|-|.|.+.
T Consensus 137 iD~qpdVCKdyk~TGYCGYGDsCKflH~R~ 166 (259)
T COG5152 137 IDTQPDVCKDYKETGYCGYGDSCKFLHDRS 166 (259)
T ss_pred eecCcccccchhhcccccCCchhhhhhhhh
Confidence 4567778988865 8999999999999874
No 150
>KOG4791 consensus Uncharacterized conserved protein [Function unknown]
Probab=36.54 E-value=9.1 Score=42.99 Aligned_cols=52 Identities=29% Similarity=0.602 Sum_probs=36.1
Q ss_pred CCCCCccCC-CCCCCCcccccCCccccccCCcccccccccCC--C-CCCCCCCCCCCCCCCcc
Q 006236 252 VPCPEFRKG-ACPKGDGCEYAHGVFESWLHPAQYRTRLCKDE--I-GCARKVCFFAHKPEELR 310 (655)
Q Consensus 252 ~~CP~~rkg-~C~~Gd~C~yaH~~~E~~~HP~~ykt~~C~~~--~-~C~~~~C~faH~~~elr 310 (655)
..|..|..+ .|.+ .|.|.|..+.+- -..++|-.+ + +|....|-|-|..--|.
T Consensus 33 t~C~~w~~~~~C~k--~C~YRHSe~~~k-----r~e~~CYwe~~p~gC~k~~CgfRH~~pPLk 88 (667)
T KOG4791|consen 33 TVCTLWQEGRCCRK--VCRYRHSEIDKK-----RSEIPCYWENQPTGCQKLNCGFRHNRPPLK 88 (667)
T ss_pred chhhhhhhcCcccc--cccchhhHHhhh-----cCcccceeecCCCccCCCccccccCCCchh
Confidence 467777554 5666 899999855443 245678776 4 49999999999754444
No 151
>PF10650 zf-C3H1: Putative zinc-finger domain; InterPro: IPR019607 This domain is conserved in fungi and might be a zinc-finger domain as it contains three conserved Cs and an H in the C-x8-C-x5-C-x3-H conformation typical of a zinc-finger.
Probab=34.40 E-value=23 Score=23.54 Aligned_cols=17 Identities=41% Similarity=0.700 Sum_probs=13.1
Q ss_pred cccCC---CCCCCCCCCCCC
Q 006236 288 LCKDE---IGCARKVCFFAH 304 (655)
Q Consensus 288 ~C~~~---~~C~~~~C~faH 304 (655)
+|.+. |.|+...|.|-|
T Consensus 2 lC~yEl~Gg~Cnd~~C~~QH 21 (23)
T PF10650_consen 2 LCPYELTGGVCNDPDCEFQH 21 (23)
T ss_pred CCccccCCCeeCCCCCCccc
Confidence 57766 478888888888
No 152
>KOG1813 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=34.24 E-value=15 Score=39.05 Aligned_cols=32 Identities=25% Similarity=0.685 Sum_probs=26.8
Q ss_pred CCCCCcCCCCCccC-CCCCCCCcccccCCcccc
Q 006236 246 KYPYTCVPCPEFRK-GACPKGDGCEYAHGVFES 277 (655)
Q Consensus 246 ~y~Ys~~~CP~~rk-g~C~~Gd~C~yaH~~~E~ 277 (655)
...|-+.+|..++. |.|.+||.|.|-|.+..+
T Consensus 181 ~~d~qpDicKdykeTgycg~gdSckFlh~r~Dy 213 (313)
T KOG1813|consen 181 RIDYQPDICKDYKETGYCGYGDSCKFLHDRSDY 213 (313)
T ss_pred eeecCchhhhhhHhhCcccccchhhhhhhhhhc
Confidence 45688889998864 999999999999987644
No 153
>COG5252 Uncharacterized conserved protein, contains CCCH-type Zn-finger protein [General function prediction only]
Probab=31.42 E-value=11 Score=38.73 Aligned_cols=27 Identities=41% Similarity=0.650 Sum_probs=23.6
Q ss_pred ccccccCC--CCCCCC-CCCCCCCCCCccc
Q 006236 285 RTRLCKDE--IGCARK-VCFFAHKPEELRP 311 (655)
Q Consensus 285 kt~~C~~~--~~C~~~-~C~faH~~~elr~ 311 (655)
|+..|--| ++|..+ .|-|+|+.+|.|.
T Consensus 84 K~~vcalF~~~~c~kg~~ckF~h~~ee~r~ 113 (299)
T COG5252 84 KTVVCALFLNKTCAKGDACKFAHGKEEARK 113 (299)
T ss_pred hhHHHHHhccCccccCchhhhhcchHHHhh
Confidence 88899988 899877 5999999999883
No 154
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=28.88 E-value=94 Score=31.21 Aligned_cols=45 Identities=20% Similarity=0.216 Sum_probs=38.4
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCCChHHHHHHHHh
Q 006236 67 IMIAAMFGSVAVLKYVIETGKVNVNRACGSDGFTALHCAVAGGANSSFEVVKLLLS 122 (655)
Q Consensus 67 Lh~AA~~G~~evvk~LL~~G~aDvN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~ 122 (655)
|..|+..|-...+...|++| -+++ .++|..|+.+++ ..++.+++.
T Consensus 147 l~~a~~kgll~F~letlkyg-g~~~-------~~vls~Av~ynh---RkIL~yfi~ 191 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYG-GNVD-------IIVLSQAVKYNH---RKILDYFIR 191 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcC-Cccc-------HHHHHHHHHhhH---HHHHHHhhc
Confidence 57899999999999999999 5554 379999999999 999998874
No 155
>KOG4791 consensus Uncharacterized conserved protein [Function unknown]
Probab=26.47 E-value=32 Score=38.86 Aligned_cols=51 Identities=29% Similarity=0.507 Sum_probs=30.5
Q ss_pred CCCCccCCCCCCCCcccccCCccccccCCcccccccccCC--CCCCCCCCCCCCCCCCc
Q 006236 253 PCPEFRKGACPKGDGCEYAHGVFESWLHPAQYRTRLCKDE--IGCARKVCFFAHKPEEL 309 (655)
Q Consensus 253 ~CP~~rkg~C~~Gd~C~yaH~~~E~~~HP~~ykt~~C~~~--~~C~~~~C~faH~~~el 309 (655)
.|-.|....|+.+|.|.|.|.-..+-. -.-|.+| +-|-+.+|.|-|+...+
T Consensus 5 dcyff~ys~cKk~d~c~~rh~E~al~n------~t~C~~w~~~~~C~k~C~YRHSe~~~ 57 (667)
T KOG4791|consen 5 DCYFFFYSTCKKGDSCPFRHCEAALGN------ETVCTLWQEGRCCRKVCRYRHSEIDK 57 (667)
T ss_pred cchhhhhhhhhccCcCcchhhHHHhcC------cchhhhhhhcCcccccccchhhHHhh
Confidence 354555567888888888887433311 1246666 33333378888876554
No 156
>COG5152 Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers [General function prediction only]
Probab=26.19 E-value=28 Score=35.03 Aligned_cols=23 Identities=30% Similarity=0.629 Sum_probs=19.5
Q ss_pred cccCC---CCCCCCC-CCCCCCCCCcc
Q 006236 288 LCKDE---IGCARKV-CFFAHKPEELR 310 (655)
Q Consensus 288 ~C~~~---~~C~~~~-C~faH~~~elr 310 (655)
.|++| |.|-||. |-|.|..++..
T Consensus 143 VCKdyk~TGYCGYGDsCKflH~R~D~K 169 (259)
T COG5152 143 VCKDYKETGYCGYGDSCKFLHDRSDFK 169 (259)
T ss_pred cccchhhcccccCCchhhhhhhhhhhh
Confidence 49988 9999995 99999987654
No 157
>KOG1763 consensus Uncharacterized conserved protein, contains CCCH-type Zn-finger [General function prediction only]
Probab=23.49 E-value=20 Score=38.15 Aligned_cols=26 Identities=23% Similarity=0.416 Sum_probs=22.5
Q ss_pred ccccccCC--CCCCCCC-CCCCCCCCCcc
Q 006236 285 RTRLCKDE--IGCARKV-CFFAHKPEELR 310 (655)
Q Consensus 285 kt~~C~~~--~~C~~~~-C~faH~~~elr 310 (655)
|+..|-.| |.|..|. |-|+|....-|
T Consensus 91 KSvvCafFk~g~C~KG~kCKFsHdl~~~~ 119 (343)
T KOG1763|consen 91 KSVVCAFFKQGTCTKGDKCKFSHDLAVER 119 (343)
T ss_pred hHHHHHHHhccCCCCCCcccccchHHHhh
Confidence 89999999 9999885 99999977654
No 158
>PF08195 TRI9: TRI9 protein; InterPro: IPR013265 This entry contains putative genes, of 129 bp, from the Trichothecene gene cluster of Fusarium sporotrichioides and Gibberella zeae (Fusarium graminearum) that encode a predicted protein of 43 amino acids whose function is unknown [, ].
Probab=21.68 E-value=43 Score=24.75 Aligned_cols=10 Identities=50% Similarity=1.116 Sum_probs=8.1
Q ss_pred CCCCchhhhh
Q 006236 610 DEPDVSWVNS 619 (655)
Q Consensus 610 ~epd~swv~~ 619 (655)
-.|||||+.-
T Consensus 13 ~dp~vswle~ 22 (43)
T PF08195_consen 13 MDPDVSWLEV 22 (43)
T ss_pred CCCCccHHHh
Confidence 4899999853
No 159
>COG5175 MOT2 Transcriptional repressor [Transcription]
Probab=20.90 E-value=1.2e+02 Score=33.17 Aligned_cols=16 Identities=25% Similarity=0.380 Sum_probs=10.8
Q ss_pred ccCCccccccccCcch
Q 006236 382 LQLPGSRLKTAFSARD 397 (655)
Q Consensus 382 l~l~~srl~~~~~ar~ 397 (655)
-|+-||.+|-+|-|-.
T Consensus 349 s~~~~s~~kq~l~a~~ 364 (480)
T COG5175 349 SHSHGSKKKQSLAAEE 364 (480)
T ss_pred hccCchHHHHHHHHHH
Confidence 4667787777776654
Done!