Query 006240
Match_columns 655
No_of_seqs 139 out of 243
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 19:43:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006240.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006240hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jg0_A Periplasmic trehalase; 99.9 1.2E-23 4.2E-28 233.9 8.5 197 426-654 105-356 (535)
2 3c68_A Uncharacterized protein 99.8 4.6E-18 1.6E-22 196.2 22.0 261 351-653 251-602 (761)
3 2z07_A Putative uncharacterize 99.8 1.2E-18 4E-23 186.0 15.6 210 430-654 21-283 (420)
4 2okx_A Rhamnosidase B; alpha b 98.6 2.3E-07 7.8E-12 109.5 15.1 181 427-653 564-746 (956)
5 3cih_A Putative alpha-rhamnosi 97.3 0.0006 2.1E-08 78.4 10.8 100 532-653 402-504 (739)
6 1v7w_A Chitobiose phosphorylas 97.3 0.00026 8.8E-09 81.7 7.2 172 443-651 349-550 (807)
7 3qde_A Cellobiose phosphorylas 96.5 0.0071 2.4E-07 70.6 10.6 183 438-651 356-560 (811)
8 3rrs_A Cellobiose phosphorylas 95.8 0.031 1.1E-06 65.5 10.9 184 438-651 363-567 (822)
9 1ulv_A Glucodextranase; GH fam 58.7 25 0.00084 42.3 9.2 155 437-651 326-485 (1020)
10 2p0v_A Hypothetical protein BT 35.7 1.5E+02 0.0051 33.0 10.1 115 534-651 200-324 (489)
No 1
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=99.88 E-value=1.2e-23 Score=233.86 Aligned_cols=197 Identities=16% Similarity=0.180 Sum_probs=155.2
Q ss_pred cccccCC--CCCCCCCC-----CcchhhHhhhHHHhhh-hHHHHHHHHHHHhccCCCCCcccccccChhhhhcCCccccc
Q 006240 426 ELYTAVP--SRPFFPRG-----FLWDEGFHQLLIWRWD-VRICLDILGHWLDLMNTDGWIPREQILGAEALSKVPEEFVL 497 (655)
Q Consensus 426 ~LfTaVP--SR~fFPRG-----FlWDEGFH~l~i~~WD-~~l~~eil~~W~dlm~~dGWIpREQILG~EARs~VP~eF~v 497 (655)
+++|.+| ++.+.|.| |+||+.||.+.+..+| +++++++|.+|+.+|+++|+||+++ .+
T Consensus 105 ~~~sli~~p~~~vvPGg~F~~~~~WDs~f~~~gLl~~~~~~~A~~~l~~~~~~~~~~G~IPng~--------------r~ 170 (535)
T 2jg0_A 105 KWDSLLPLPEPYVVPGGRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEIDTYGHIPNGN--------------RS 170 (535)
T ss_dssp TTCSBCCCSSCEECCBTTBCSCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSSCCSBS--------------BG
T ss_pred CccccccCCCCcccCCccccccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhccCCcccCCC--------------Cc
Confidence 4666544 77777766 9999999999999995 6999999999999999999999962 35
Q ss_pred cCCCCCCCcchHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhcC----------------C-----
Q 006240 498 QHPTNGNPPTLFLVLRELIYAIKKNKFTATESNEISSFLERALVRLEAWFQWFNTTQS----------------G----- 556 (655)
Q Consensus 498 Q~p~~aNPPTl~l~l~~ll~~~~~~~~~~~~~~~~~~fL~~~yprL~~wy~WF~~TQ~----------------G----- 556 (655)
++.+..|||++++++..+.+.- ..+||+++||+|+++|+||.+.+. |
T Consensus 171 yY~~~sqPPl~~~~v~~~~~~~------------~~~fL~~~~p~L~~~~~ww~~~~~~~~~g~~~~~~~~~~~G~~l~~ 238 (535)
T 2jg0_A 171 YYLSRSQPPFFALMVELLAQHE------------GDAALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTLLNR 238 (535)
T ss_dssp GGTTCCCSCCHHHHHHHHHHHH------------THHHHHHHHHHHHHHHHHHTTTCTTCCTTEEETTEEECTTSCEEEC
T ss_pred cCCCCCCccHHHHHHHHHHHcC------------CHHHHHHHHHHHHHHHHHHHhCCcccCccccccceeecCCCCccee
Confidence 6788899999999998887641 248999999999999999977653 1
Q ss_pred -------CCCCcceeeeCCCCcccccCC-----------CCCCCCCCCCCCCCC--------CCCccccchHHHHHHHHH
Q 006240 557 -------KEMSSYFWHGRDTTTIRELNP-----------KTLSSGLDDYPRASH--------PSEEERHLDLRCWMLLAV 610 (655)
Q Consensus 557 -------~~~~~YrWrGR~~~~~~elNp-----------~tL~SGLDDYPRa~~--------p~~~E~HvDL~sWm~~~a 610 (655)
+.+++||+...+. .++++ +...||+||+||... +.....+|||+|||+.+.
T Consensus 239 y~~~~~~prpesyr~d~~~~---~~~~~~~~~~~y~~~~~~~eSGwD~s~R~~~~~~~l~~~~t~~i~~VDlnA~ly~a~ 315 (535)
T 2jg0_A 239 YWDDRDTPRPESWVEDIATA---KSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKME 315 (535)
T ss_dssp CCCSCCSCCGGGHHHHHHHH---HTCTTSCHHHHHHHHHHHHHTTCCSCGGGBSSTTCGGGBCGGGEECHHHHHHHHHHH
T ss_pred eccCCCCCCCcceeehhhhh---hccccchhHHHHHHHHHHHhCCCCCccccCCCCCcccccCCccchhhHHHHHHHHHH
Confidence 0112343332211 11221 245799999999542 122347899999999999
Q ss_pred HHHHHHHHHhCCCchHHHHHHHHHHhccChhhHhhhcccccCCC
Q 006240 611 DSLHSIAELFESSSEHKKEYGSTATLLSDFKFLISFILILHTEL 654 (655)
Q Consensus 611 ~~m~~iA~~lg~~~d~~~~y~~~~~~l~d~~~ln~~hws~~~~~ 654 (655)
+.|++||+.||+++++ ++|.+.++.++ +.+|+.+|+++++.
T Consensus 316 ~~la~lA~~lG~~~~a-~~~~~~A~~lk--~ai~~~fWdee~G~ 356 (535)
T 2jg0_A 316 KILARASKAAGDNAMA-NQYETLANARQ--KGIEKYLWNDQQGW 356 (535)
T ss_dssp HHHHHHHHHHTCHHHH-HHHHHHHHHHH--HHHHHHSEETTTTE
T ss_pred HHHHHHHHHhCChHHH-HHHHHHHHHHH--HHHHHhCcCCCCCE
Confidence 9999999999998765 79999999999 99999999998763
No 2
>3c68_A Uncharacterized protein YGJK; GH63, processing alpha-glucosidase, alpha/alpha barrel, hydrolase; HET: BMA; 1.50A {Escherichia coli} PDB: 3c67_A* 2ds3_A* 3c69_A* 3d3i_A
Probab=99.78 E-value=4.6e-18 Score=196.18 Aligned_cols=261 Identities=15% Similarity=0.178 Sum_probs=181.5
Q ss_pred hhhHHHHHHHHHHHHHHHhhccCCCCCChhhHHHHHHH----HHhhcccceeeeccceecCCccccccccCCccccCCcc
Q 006240 351 SLTSLLKEKQSEFDAKFENCFKMAAKLDSESVVVGKAA----IGNMLGGIGYFYGQSKVSLPKNTKLKNHDNFLLYWPAE 426 (655)
Q Consensus 351 ~lt~~l~~~~~~F~~kFe~~F~l~~k~~~~~~~fakaa----lSNLLGGIGYFYG~s~V~~~~~~~~~~~~~~~~~~p~~ 426 (655)
..++.+++..+.++...++.+..... +++...+++.+ .+|+.+..|+ | |.+
T Consensus 251 ~~~~~~~~~~~~w~~~l~~~~~~~~~-~~~~~~l~~~a~~tL~~n~~~~~g~------v------------------~~~ 305 (761)
T 3c68_A 251 RPAFYLTASQQRWEEYLKKGLTNPDA-TPEQTRVAVKAIETLNGNWRSPGGA------V------------------KFN 305 (761)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCCCTTS-CHHHHHHHHHHHHHHHHTEECCBTT------B------------------CSC
T ss_pred hHHHHHHHHHHHHHHHHhccCCCCCC-CHHHHHHHHHHHHHHHHhccCccCc------C------------------CCC
Confidence 34556666666666666666544322 23323343333 3555554332 1 112
Q ss_pred ccccCCCCCCCCC--CCcchhhHhhhHHHhhhhHHHHHHHHHHHhcc---------CCCCCcccccccCh-hhhhcCCcc
Q 006240 427 LYTAVPSRPFFPR--GFLWDEGFHQLLIWRWDVRICLDILGHWLDLM---------NTDGWIPREQILGA-EALSKVPEE 494 (655)
Q Consensus 427 LfTaVPSR~fFPR--GFlWDEGFH~l~i~~WD~~l~~eil~~W~dlm---------~~dGWIpREQILG~-EARs~VP~e 494 (655)
-++..++++.|+. .|+||..||.+.+..+|+++++++|.++++.+ .++|+||++.+... ++|...+.
T Consensus 306 ~v~P~~g~~wF~~~~~w~wDs~~~a~gL~~~~~elAr~~L~~l~~~Q~~~~d~~r~~~~G~IP~~~~~~~~p~r~g~~~- 384 (761)
T 3c68_A 306 TVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGG- 384 (761)
T ss_dssp EECSCTTCTTTCTTCBCHHHHHHHHHHHTTTCHHHHHHHHHHHHTTCCCTTCSSCGGGTTCCCSBBCSSCCGGGTSCCS-
T ss_pred eEEecCCCCCCCcCCeeccHHHHHHHHHHHcCHHHHHHHHHHHHHhhhhcccCCccCCCCEeeeeeccCCcccccCccc-
Confidence 2222234678998 99999999999999999999999999999997 89999999986543 33332222
Q ss_pred ccccCCCCCCCcchHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhcCC---CC-------------
Q 006240 495 FVLQHPTNGNPPTLFLVLRELIYAIKKNKFTATESNEISSFLERALVRLEAWFQWFNTTQSG---KE------------- 558 (655)
Q Consensus 495 F~vQ~p~~aNPPTl~l~l~~ll~~~~~~~~~~~~~~~~~~fL~~~yprL~~wy~WF~~TQ~G---~~------------- 558 (655)
+.+....+||.+++++..+.+.. ...+||+++||+|++|++|+.+.... ++
T Consensus 385 --~~~~~~sqPPl~~~av~~yy~~t-----------gD~~fL~e~~P~L~~~~~w~~~~rd~d~~GL~~y~~~~~~~~~~ 451 (761)
T 3c68_A 385 --NWNERNTKPSLAAWSVMEVYNVT-----------QDKTWVAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNT 451 (761)
T ss_dssp --SCBCSCCCCCCHHHHHHHHHHHH-----------CCHHHHHHHHHHHHHHHHHHHHHSCTTCSSCCCCEEECCTTTBC
T ss_pred --cccCCCCCcHHHHHHHHHHHHHh-----------CCHHHHHHHHHHHHHHHHHHHhCCCCCcCccEEecccccccccC
Confidence 45677789999999998888762 23689999999999999999875421 12
Q ss_pred --CCcceeeeCCCC------------cccccCCCCC----------CCCCCCCCCCCCC---------------------
Q 006240 559 --MSSYFWHGRDTT------------TIRELNPKTL----------SSGLDDYPRASHP--------------------- 593 (655)
Q Consensus 559 --~~~YrWrGR~~~------------~~~elNp~tL----------~SGLDDYPRa~~p--------------------- 593 (655)
+++|++.-+++. ...+.|+..+ .||||++||...+
T Consensus 452 prge~~~~d~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~a~weSG~D~s~rw~~~~~~~~~~y~~~~~~~~~w~~~ 531 (761)
T 3c68_A 452 ESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVK 531 (761)
T ss_dssp TTSCBEEEEEETTEEEEEECHHHHHHHHHHTCSSEEECHHHHHHHHHHTCTTCGGGTCCCHHHHHHHHHTTCCGGGGCCC
T ss_pred CCcchhccccccccchhcccccccchhccccccccchhhhhhhccccCCCCcchhccccccccccccccccccccchhhh
Confidence 122333222110 0012233333 6999999997522
Q ss_pred ------CCc--------cccchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhccChhhHhhhcccccCC
Q 006240 594 ------SEE--------ERHLDLRCWMLLAVDSLHSIAELFESSSEHKKEYGSTATLLSDFKFLISFILILHTE 653 (655)
Q Consensus 594 ------~~~--------E~HvDL~sWm~~~a~~m~~iA~~lg~~~d~~~~y~~~~~~l~d~~~ln~~hws~~~~ 653 (655)
..+ ...||+.|||+.+.+.|++||+.||+++++ ++|.+.++.++ +.+|+.+|+++++
T Consensus 532 ~~~n~~~~G~l~~~~~~~~~VdlnA~ly~al~~lA~lA~~LG~~e~A-~~y~~~A~~lk--~ai~~~fWd~e~G 602 (761)
T 3c68_A 532 FAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEA-KRYRQLAQQLA--DYINTCMFDPTTQ 602 (761)
T ss_dssp EEEEECTTCCEEEEEESEECHHHHHHHHHHHHHHHHHHHHTTCHHHH-HHHHHHHHHHH--HHHHHHTEETTTT
T ss_pred hccccccccccccCcccccCHHHHHHHHHHHHHHHHHHHHhCChHHH-HHHHHHHHHHH--HHHHHhCcCccCC
Confidence 112 238999999999999999999999998775 79999999999 8999999999865
No 3
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=99.78 E-value=1.2e-18 Score=186.03 Aligned_cols=210 Identities=19% Similarity=0.250 Sum_probs=147.0
Q ss_pred cCCCCCCCCCCCcchhhHhhhHHHhhhhHHHHHHHHHHHh-ccCCCCCcccccccChhhhhcCCc--------cccccCC
Q 006240 430 AVPSRPFFPRGFLWDEGFHQLLIWRWDVRICLDILGHWLD-LMNTDGWIPREQILGAEALSKVPE--------EFVLQHP 500 (655)
Q Consensus 430 aVPSR~fFPRGFlWDEGFH~l~i~~WD~~l~~eil~~W~d-lm~~dGWIpREQILG~EARs~VP~--------eF~vQ~p 500 (655)
.|||+..||+.|+||..||.+.+...|++.+.+.|..+++ .++++|.||++.--. +.|+.-|. .+-+|+.
T Consensus 21 ~vP~~~~f~~~~~wDs~~~~~gl~~~~~~~a~~~l~~~~~~~q~~~G~ip~~v~~~-~~~~y~p~~~~w~~~~~~~~~~~ 99 (420)
T 2z07_A 21 TVPAHGLYPYQWLWDSAFIALGWTQVDWERAWQELLCLFDYGQGPDGMLPHIVFHE-QSRDYFPGPDVWGREARAQPATS 99 (420)
T ss_dssp BCSSTTCCSCEEHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHCCTTCCCCSEEECC-SCCCCC-----------CCCEEC
T ss_pred cCCCCCCCCCccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhCCCcceecccC-CCcccCcchhhhcccccccCCCC
Confidence 3999999999999999999999999999999999999999 999999999874221 12221110 1235677
Q ss_pred CCCCCcchHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhc----CCCCCCccee-eeCCCCcc--c
Q 006240 501 TNGNPPTLFLVLRELIYAIKKNKFTATESNEISSFLERALVRLEAWFQWFNTTQ----SGKEMSSYFW-HGRDTTTI--R 573 (655)
Q Consensus 501 ~~aNPPTl~l~l~~ll~~~~~~~~~~~~~~~~~~fL~~~yprL~~wy~WF~~TQ----~G~~~~~YrW-rGR~~~~~--~ 573 (655)
...+||.+++++..+.+... +.....+||+++||+|++|++|+.+.. .|-+...+.| .|.+.... .
T Consensus 100 ~~~qpP~~~~~~~~~~~~tg-------D~~~~~~~L~~~~p~l~~~~~~~~~~~d~~~~Gl~~~~~~we~G~~~~~~w~~ 172 (420)
T 2z07_A 100 GITQPPVVATVVRYLYEKDP-------DRDRARERARYLFPKLLAFHRWLYHARDPYRTGLVVIVHPWESGMDNSPAWDK 172 (420)
T ss_dssp SSCCCCCHHHHHHHHHHHCS-------CHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSCCCBSSGGGGTCTTCGGGHH
T ss_pred CCcCCcHHHHHHHHHHHhCc-------cchhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCceeeecCCCcCCCCCccccc
Confidence 88999999999998876521 223457999999999999999997654 2333333446 45432210 0
Q ss_pred ccCCCCCCCCCCCCCCCC--------CCCCccc-----------------------------cchHHHHHHHHHHHHHHH
Q 006240 574 ELNPKTLSSGLDDYPRAS--------HPSEEER-----------------------------HLDLRCWMLLAVDSLHSI 616 (655)
Q Consensus 574 elNp~tL~SGLDDYPRa~--------~p~~~E~-----------------------------HvDL~sWm~~~a~~m~~i 616 (655)
-+. ..-+.++|+|||.+ .|...|+ .|||.|||+.+.+.|++|
T Consensus 173 ~~~-~~~~~~~~~y~r~d~~~~~~~~~p~~~~~~~~~~~~~~~~esG~d~s~l~~~~~~~~~~vdlna~~~~~~~~la~l 251 (420)
T 2z07_A 173 PLS-RVPVENLPPYERRDVKHVNPEERPRKEDYDRYLSLLYLFRRLEYDPREIYRQSPFKVVDVGFNAILQRANRDLYAL 251 (420)
T ss_dssp HHH-TCCC-----------CCSCC-------CHHHHHHHHHHHHHTTTCHHHHHHHCSCCEECHHHHHHHHHHHHHHHHH
T ss_pred ccc-ccCCCCcchhhhhhhhccccccCCcHHHHHHHHHHHHHHHHcCCChhhhcccCCcccCChhHHHHHHHHHHHHHHH
Confidence 000 01233567888853 2443343 679999999999999999
Q ss_pred HHHhCCCchHHHHHHHHHHhccChhhHhhhcccccCCC
Q 006240 617 AELFESSSEHKKEYGSTATLLSDFKFLISFILILHTEL 654 (655)
Q Consensus 617 A~~lg~~~d~~~~y~~~~~~l~d~~~ln~~hws~~~~~ 654 (655)
|+.||++ +++|.+.++.++ +.+|+ +|+++++.
T Consensus 252 a~~lg~~---a~~~~~~a~~~~--~ai~~-~Wd~~~g~ 283 (420)
T 2z07_A 252 AVLLQED---PYEIEEWIVRGE--VGLEA-LWDREAGF 283 (420)
T ss_dssp HHHTTCC---CHHHHHHHHHHH--HHHHH-TEETTTTE
T ss_pred HHHhCcc---HHHHHHHHHHHH--HHHHH-hhCcccCe
Confidence 9999987 378999999999 99999 99998653
No 4
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=98.63 E-value=2.3e-07 Score=109.54 Aligned_cols=181 Identities=14% Similarity=0.120 Sum_probs=127.5
Q ss_pred ccccCCCCCCCCCCCcchhhHhhhHHHhh--hhHHHHHHHHHHHhccCCCCCcccccccChhhhhcCCccccccCCCCCC
Q 006240 427 LYTAVPSRPFFPRGFLWDEGFHQLLIWRW--DVRICLDILGHWLDLMNTDGWIPREQILGAEALSKVPEEFVLQHPTNGN 504 (655)
Q Consensus 427 LfTaVPSR~fFPRGFlWDEGFH~l~i~~W--D~~l~~eil~~W~dlm~~dGWIpREQILG~EARs~VP~eF~vQ~p~~aN 504 (655)
.+|-+|-|. -+++.+|--+..+.+..- +++++...|....+.+..||.||.- +|.....+.|. -
T Consensus 564 ~~tD~p~RE--r~~W~gD~~~~a~~~l~~~g~~~lar~~L~~l~~~Q~~dG~ip~~----------~p~~~~~~~~~--~ 629 (956)
T 2okx_A 564 TFVDCPSYE--QVFWVGDSRNEALVNYYVFGETEIVERCLNLVPGSADETPLYLDQ----------VPSAWSSVIPN--W 629 (956)
T ss_dssp SBCSCTTTT--CCCBHHHHHHHHHHHHHHTCCCHHHHHHHHHGGGGTTTCTTCCSB----------SSCSSCCCCHH--H
T ss_pred CccCCCccc--CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccCCCcCcc----------ccccccCCCcC--h
Confidence 467778883 346777998877766655 8999999999999999999999983 34322111111 2
Q ss_pred CcchHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcceeeeCCCCcccccCCCCCCCCC
Q 006240 505 PPTLFLVLRELIYAIKKNKFTATESNEISSFLERALVRLEAWFQWFNTTQSGKEMSSYFWHGRDTTTIRELNPKTLSSGL 584 (655)
Q Consensus 505 PPTl~l~l~~ll~~~~~~~~~~~~~~~~~~fL~~~yprL~~wy~WF~~TQ~G~~~~~YrWrGR~~~~~~elNp~tL~SGL 584 (655)
+|.+++++-.+... ..+.+||+++||.|+++.+|+.+.. .. .++-+. + ..|+
T Consensus 630 ~~~~i~~~~~yy~~-----------tGD~~~L~e~yp~lk~~l~~~~~~~-d~--~GLl~~-~-------------~~~~ 681 (956)
T 2okx_A 630 TFFWILACREYAAH-----------TGNEAFAARIWPAVKHTLTHYLEHI-DD--SGLLNM-A-------------GWNL 681 (956)
T ss_dssp HHHHHHHHHHHHHH-----------HTCHHHHHHHHHHHHHHHHHHHTTB-CT--TSSBCC-S-------------SCCC
T ss_pred HHHHHHHHHHHHHH-----------hCCHHHHHHHHHHHHHHHHHHHhcC-CC--CCCEEe-C-------------CCCc
Confidence 34445555555443 1245899999999999999997532 11 111110 0 1245
Q ss_pred CCCCCCCCCCCccccchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhccChhhHhhhcccccCC
Q 006240 585 DDYPRASHPSEEERHLDLRCWMLLAVDSLHSIAELFESSSEHKKEYGSTATLLSDFKFLISFILILHTE 653 (655)
Q Consensus 585 DDYPRa~~p~~~E~HvDL~sWm~~~a~~m~~iA~~lg~~~d~~~~y~~~~~~l~d~~~ln~~hws~~~~ 653 (655)
.|+.....|..++ ++++.++++.+.+.|++||+.||.++++ ++|.+.++.|+ +.+|+..|+++.+
T Consensus 682 ~DW~d~~~~~~G~-~~~~~a~~~~al~~~a~lA~~LG~~~~a-~~y~~~A~~lk--~ai~~~~wd~~~g 746 (956)
T 2okx_A 682 LDWAPIDQPNEGI-VTHQNLFLVKALRDSRALAAAAGATEEA-DAFAARADLLA--ETINAVLWDEEKR 746 (956)
T ss_dssp CCSSSCCCCSSSE-EHHHHHHHHHHHHHHHHHHHHTTCGGGG-HHHHHHHHHHH--HHHHHHSEETTTT
T ss_pred cCccCCCCCCCCc-CHHHHHHHHHHHHHHHHHHHHhCChHHH-HHHHHHHHHHH--HHHHHHhcCCCCC
Confidence 6665543233333 8999999999999999999999998876 79999999999 9999999998754
No 5
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.34 E-value=0.0006 Score=78.38 Aligned_cols=100 Identities=13% Similarity=0.145 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCcceeeeCCCCcccccCCCCCCCCC---CCCCCCCCCCCccccchHHHHHHH
Q 006240 532 ISSFLERALVRLEAWFQWFNTTQSGKEMSSYFWHGRDTTTIRELNPKTLSSGL---DDYPRASHPSEEERHLDLRCWMLL 608 (655)
Q Consensus 532 ~~~fL~~~yprL~~wy~WF~~TQ~G~~~~~YrWrGR~~~~~~elNp~tL~SGL---DDYPRa~~p~~~E~HvDL~sWm~~ 608 (655)
+.+||+++||.|+++++|+.+... . .++ |.. ..|. .|++.+..|..+ ..+++.++++.
T Consensus 402 D~~~L~e~~p~l~~~ld~~~~~~d-~--~GL-~~~--------------~~G~W~~~dW~d~~~~~~G-~~~~~~a~~y~ 462 (739)
T 3cih_A 402 DRHFVNQLYPRMQTMMDYVLGRTN-K--NGM-VEG--------------MSGDWVFVDWADGYLDKKG-ELSFEQVLFCR 462 (739)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTBC-T--TSC-BCC--------------CTTCBCCSCCCTTCCCCSS-EEHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcC-C--CCC-ccc--------------CCCCcccCCCcccccCCCC-cchHHHHHHHH
Confidence 358999999999999999976321 1 111 111 1121 133322112222 35899999999
Q ss_pred HHHHHHHHHHHhCCCchHHHHHHHHHHhccChhhHhhhcccccCC
Q 006240 609 AVDSLHSIAELFESSSEHKKEYGSTATLLSDFKFLISFILILHTE 653 (655)
Q Consensus 609 ~a~~m~~iA~~lg~~~d~~~~y~~~~~~l~d~~~ln~~hws~~~~ 653 (655)
+.+.|++||+.||+++++ ++|++.++.|+ +.+|+..|+++.+
T Consensus 463 al~~~a~lA~~lG~~~~A-~~y~~~A~~lk--~a~~~~~wd~~~G 504 (739)
T 3cih_A 463 SLETMALCADLVGDKDGQ-QKYEKLASALK--AKLEPTFWNNQKQ 504 (739)
T ss_dssp HHHHHHHHHHHHTCHHHH-HHHHHHHHHHH--HHHHHHHEETTTT
T ss_pred HHHHHHHHHHHcCChHHH-HHHHHHHHHHH--HHHHHhccCcccC
Confidence 999999999999998876 79999999999 9999999998754
No 6
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=97.30 E-value=0.00026 Score=81.70 Aligned_cols=172 Identities=10% Similarity=0.048 Sum_probs=109.4
Q ss_pred chhhHhhhHHHhhhhHHHHHHHHHHHhccCCCC-Cccccc--ccChhhhhcC-----------CccccccC----CC-CC
Q 006240 443 WDEGFHQLLIWRWDVRICLDILGHWLDLMNTDG-WIPREQ--ILGAEALSKV-----------PEEFVLQH----PT-NG 503 (655)
Q Consensus 443 WDEGFH~l~i~~WD~~l~~eil~~W~dlm~~dG-WIpREQ--ILG~EARs~V-----------P~eF~vQ~----p~-~a 503 (655)
.|--...+.+..-++++++++|...++.+..|| .+|.=. ...+| ..+. |.+.. |. +. ..
T Consensus 349 RD~~~~~~~l~~~~p~~ar~~l~~~~~~Q~~~G~~~p~~~p~~~~~~-~g~~~~~~~~~~~g~~~~~~-~~~g~~~~~~D 426 (807)
T 1v7w_A 349 RDTAQDAISVPHANPEMTRKRIVDLLRGQVKAGYGLHLFDPDWFDPE-KEDVAPSKSPTVVPTPSDED-KIHGIKDTCSD 426 (807)
T ss_dssp HHHHHHTTSCTTTCHHHHHHHHHHHHHTBCTTSCBCSEECGGGGCC------------------------CCCGGGCBSS
T ss_pred hHHhHHHHHHhhcCHHHHHHHHHHHHhccccCCCcceeeeecccccc-ccccCCccccccccCCCcch-hhcCCCCCccc
Confidence 466666666778899999999999999999998 455432 11100 1111 11111 11 11 12
Q ss_pred CCcchHHHHHHHHHHHHhccccccchhHHHHHHHHHHHH-----------HHHHHHHHHhhcCCCCCCcceeeeCCCCcc
Q 006240 504 NPPTLFLVLRELIYAIKKNKFTATESNEISSFLERALVR-----------LEAWFQWFNTTQSGKEMSSYFWHGRDTTTI 572 (655)
Q Consensus 504 NPPTl~l~l~~ll~~~~~~~~~~~~~~~~~~fL~~~ypr-----------L~~wy~WF~~TQ~G~~~~~YrWrGR~~~~~ 572 (655)
.++-++.++.++++.- .+.+||+++||. ++++.+|..+. .+. .+-..| |.. +..
T Consensus 427 ~~lw~~~~~~~y~~~t-----------GD~~~L~e~~p~~~~~~~~v~e~~~~~~~~~~~~-~~~-~GL~~~-~~~-DW~ 491 (807)
T 1v7w_A 427 DHLWLIPTICKYVMET-----------GETSFFDQMIPYADGGEASVYEHMKAALDFSAEY-VGQ-TGICKG-LRA-DWN 491 (807)
T ss_dssp GGGGHHHHHHHHHHHH-----------CCGGGGGCEEECTTSCEEEHHHHHHHHHHHHHHS-BCT-TSCBEE-ETC-SSS
T ss_pred hhhHHHHHHHHHHHHh-----------CCHHHHhcccccccCCcchHHHHHHHHHHHHHhc-CCC-CCCccc-CCC-CCC
Confidence 3444556666666542 234677877775 99999999762 121 111222 221 110
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhccChhhHhhhccccc
Q 006240 573 RELNPKTLSSGLDDYPRASHPSEEERHLDLRCWMLLAVDSLHSIAELFESSSEHKKEYGSTATLLSDFKFLISFILILH 651 (655)
Q Consensus 573 ~elNp~tL~SGLDDYPRa~~p~~~E~HvDL~sWm~~~a~~m~~iA~~lg~~~d~~~~y~~~~~~l~d~~~ln~~hws~~ 651 (655)
.||| +. .-..|++.+.++.+.+.|++||+.+|+++++ ++|++.++.|+ +.+|+..|+++
T Consensus 492 ---------D~~~-------~~-~g~~v~~~a~~y~al~~~a~la~~lG~~~~a-~~~~~~A~~lk--~~~~~~~w~~~ 550 (807)
T 1v7w_A 492 ---------DCLN-------LG-GGESSMVSFLHFWALQEFIDLAKFLGKDQDV-NTYTEMAANVR--EACETHLWDDE 550 (807)
T ss_dssp ---------TTCC-------CE-EEEEHHHHHHHHHHHHHHHHHHHHHTCHHHH-HHHHHHHHHHH--HHHHHHSEETT
T ss_pred ---------CcCC-------CC-CCeehhHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHH--HHHHHhccCCC
Confidence 1121 11 2256999999999999999999999998775 79999999999 99999999976
No 7
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=96.54 E-value=0.0071 Score=70.62 Aligned_cols=183 Identities=13% Similarity=0.028 Sum_probs=119.7
Q ss_pred CCCCcchhhHhhhHHHhhhhHHHHHHHHHHHhccCCCCCcccccc-cChhhhhcCCccccccCC-CCCCCcc-hHHHHHH
Q 006240 438 PRGFLWDEGFHQLLIWRWDVRICLDILGHWLDLMNTDGWIPREQI-LGAEALSKVPEEFVLQHP-TNGNPPT-LFLVLRE 514 (655)
Q Consensus 438 PRGFlWDEGFH~l~i~~WD~~l~~eil~~W~dlm~~dGWIpREQI-LG~EARs~VP~eF~vQ~p-~~aNPPT-l~l~l~~ 514 (655)
.+|| .|--...+-+..-+++++++.|...+..+.+||-||+.-- +..+- ..|.| .....+. |++++.+
T Consensus 356 ~~G~-RD~~qd~~~~~~~~p~~~r~~il~~~~~Q~~dG~~~h~~~p~~~~g--------~~~~~~~~~D~~lW~i~av~~ 426 (811)
T 3qde_A 356 GMGF-RDSNQDLLGFVHQIPERARERLLDLAATQLEDGSAYHQYQPLTKKG--------NNEIGSNFNDDPLWLILATAA 426 (811)
T ss_dssp CEEH-HHHHHHHHTTTTTCHHHHHHHHHHHHTTBCTTSCBCSEECTTTCCE--------ECTTCCCBTTHHHHHHHHHHH
T ss_pred CCcc-HHHHHHHHHHHhcCHHHHHHHHHHHHhhcccCCCccceecCCCCCC--------CCCCCCCcccchhHHHHHHHH
Confidence 4565 7877777777888999999999999999999999988621 11111 11221 2233343 5677777
Q ss_pred HHHHHHhccccccchhHHHHHHH-------------HHHHHHHHHHHHHHh-hcCCCCCCcceeeeCCCCcccccCCCCC
Q 006240 515 LIYAIKKNKFTATESNEISSFLE-------------RALVRLEAWFQWFNT-TQSGKEMSSYFWHGRDTTTIRELNPKTL 580 (655)
Q Consensus 515 ll~~~~~~~~~~~~~~~~~~fL~-------------~~yprL~~wy~WF~~-TQ~G~~~~~YrWrGR~~~~~~elNp~tL 580 (655)
+++.-. +.+||+ .+|+.+++..+|-.+ ....+++ . -| ..+.+.-+|+.|.
T Consensus 427 Y~~~TG-----------D~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~g~~GL~---~-~g-~~DWnD~ln~~~~ 490 (811)
T 3qde_A 427 YIKETG-----------DYSILKEQVPFNNDPSKADTMFEHLTRSFYHVVNNLGPHGLP---L-IG-RADWNDCLNLNCF 490 (811)
T ss_dssp HHHHHC-----------CGGGGGSEEEETTEEEEEEEHHHHHHHHHHHHHTCBCTTSSB---B-CB-TCSSSTTCCSSCC
T ss_pred HHHHHC-----------CHHHHHhhhhhhcCCcccccHHHHHHHHHHHHHhcCCCCCCc---c-cc-cCCchhhcccccc
Confidence 777521 223453 478899998888653 2222232 2 12 2334334444332
Q ss_pred CCCCCCC-----CCCCCCCCccccchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhccChhhHhhhccccc
Q 006240 581 SSGLDDY-----PRASHPSEEERHLDLRCWMLLAVDSLHSIAELFESSSEHKKEYGSTATLLSDFKFLISFILILH 651 (655)
Q Consensus 581 ~SGLDDY-----PRa~~p~~~E~HvDL~sWm~~~a~~m~~iA~~lg~~~d~~~~y~~~~~~l~d~~~ln~~hws~~ 651 (655)
..=.++- ||.. .. -..|-+.+..+.+-+.|++||+.+|+++.+ ++|.+.++.|+ +.+|+..|+.+
T Consensus 491 ~~~vg~~~~~vtp~~~--~~-gesv~~~al~y~AL~~~a~lA~~lGd~~~A-~~~~~~A~~lk--~a~~~~~Wdg~ 560 (811)
T 3qde_A 491 STVPDESFQTTTSKDG--KV-AESVMIAGMFVFIGKDYVKLCEYMGLEEEA-RKAQQHIDAMK--EAILKYGYDGE 560 (811)
T ss_dssp CCCTTSCTTTSCCCCC--SS-CEEHHHHHHHHHHHHHHHHHHHHTTCHHHH-HHHHHHHHHHH--HHHHHHSBCSS
T ss_pred ccccCccccccccccC--Cc-ccCHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHH--HHHHHhccCcC
Confidence 2222221 3211 12 235899999999999999999999987665 89999999999 99999999864
No 8
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=95.81 E-value=0.031 Score=65.48 Aligned_cols=184 Identities=13% Similarity=-0.008 Sum_probs=119.4
Q ss_pred CCCCcchhhHhhhHHHhhhhHHHHHHHHHHHhccCCCCCcccccc-cChhhhhcCCccccccCCCCCCCcc-hHHHHHHH
Q 006240 438 PRGFLWDEGFHQLLIWRWDVRICLDILGHWLDLMNTDGWIPREQI-LGAEALSKVPEEFVLQHPTNGNPPT-LFLVLREL 515 (655)
Q Consensus 438 PRGFlWDEGFH~l~i~~WD~~l~~eil~~W~dlm~~dGWIpREQI-LG~EARs~VP~eF~vQ~p~~aNPPT-l~l~l~~l 515 (655)
.+|| .|--...+-+..-+++++++.|...+..+.+||-||+.-- +..+-...+|. .....+. |++++.++
T Consensus 363 ~~G~-RD~~qd~~~~~~~~pe~ar~~il~~~~~Q~~dG~v~h~~~p~~~~g~~~~~~-------~~~D~~lWl~~av~~Y 434 (822)
T 3rrs_A 363 GMGF-RDSNQDLLGFVHLIPERARERIIDIASTQFADGSAYHQYQPLTKRGNNDIGS-------GFNDDPLWLIAGTAAY 434 (822)
T ss_dssp CEEH-HHHHHHHHHHTTTCHHHHHHHHHHHHTTCCTTSCCCSEEETTTTEECTTTCS-------CBTTHHHHHHHHHHHH
T ss_pred CCch-HHHHHHHHHHHhcCHHHHHHHHHHHHHhhcccCcccceecCcCCCCccCCCC-------cccchHhHHHHHHHHH
Confidence 4565 8888888888889999999999999999999999998632 12221111121 1233333 56778888
Q ss_pred HHHHHhccccccchhHHHHHHH-------------HHHHHHHHHHHHHHh-hcCCCCCCcceeeeCCCCcccccCCCCCC
Q 006240 516 IYAIKKNKFTATESNEISSFLE-------------RALVRLEAWFQWFNT-TQSGKEMSSYFWHGRDTTTIRELNPKTLS 581 (655)
Q Consensus 516 l~~~~~~~~~~~~~~~~~~fL~-------------~~yprL~~wy~WF~~-TQ~G~~~~~YrWrGR~~~~~~elNp~tL~ 581 (655)
++.-.. .+||+ .+|..+++..+|-.+ ...-+++ .-| ..+.+.-||+.|..
T Consensus 435 i~~TGD-----------~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~g~~GLp----~~g-~gDWnD~ln~~~~~ 498 (822)
T 3rrs_A 435 IKETGD-----------FSILDEPVPFDNEPGSEVPLFEHLTRSFEFTVTHRGPHGLP----LIG-RADWNDCLNLNCFS 498 (822)
T ss_dssp HHHHCC-----------GGGGGSEECSTTCTTCCEEHHHHHHHHHHHHHHSBCTTSSB----BCB-TCSSSTTCCTTCCC
T ss_pred HHHHCC-----------HHHHHhhhhhhccccccccHHHHHHHHHHHHHhcCCCCCCc----ccC-CCcchhhccccccc
Confidence 876221 23443 478899999998764 2111222 112 22333334443322
Q ss_pred CCCCCC-----CCCCCCCCccccchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhccChhhHhhhccccc
Q 006240 582 SGLDDY-----PRASHPSEEERHLDLRCWMLLAVDSLHSIAELFESSSEHKKEYGSTATLLSDFKFLISFILILH 651 (655)
Q Consensus 582 SGLDDY-----PRa~~p~~~E~HvDL~sWm~~~a~~m~~iA~~lg~~~d~~~~y~~~~~~l~d~~~ln~~hws~~ 651 (655)
.=.++- ||.. ..+ ..|-+.+-.+.+-+.|++||+.+|.++.+ ++|++.++.|+ +.+|+..|+.+
T Consensus 499 ~~vg~~~~~~~p~~~--~~G-esv~~~al~y~AL~~~a~lA~~~G~~~~A-~~~~~~A~~lk--~a~~~~~Wdg~ 567 (822)
T 3rrs_A 499 TTPGESFQTTENQAG--GVA-ESTFIAAQFVLYGEQYAELAARRGLADVA-DRARGHVAEMR--DALLTDGWDGS 567 (822)
T ss_dssp CSTTCCTTTCCSSCC--CCC-EEHHHHHHHHHHHHHHHHHHHHTTCHHHH-HHHHHHHHHHH--HHHHTTTBCSS
T ss_pred ccccccccccccccC--Ccc-ccHHHHHHHHHHHHHHHHHHHHcCChHHH-HHHHHHHHHHH--HHHHHhccCcc
Confidence 222211 2211 122 34888888888899999999999987765 89999999999 99999999864
No 9
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=58.74 E-value=25 Score=42.31 Aligned_cols=155 Identities=12% Similarity=0.085 Sum_probs=99.6
Q ss_pred CCCCCcchhhHhhhHHHhh-hhHHHHHHHHHHHhcc-CCCCCccccc-ccChhhhhcCCcccc-ccCCCCCCCcchHHHH
Q 006240 437 FPRGFLWDEGFHQLLIWRW-DVRICLDILGHWLDLM-NTDGWIPREQ-ILGAEALSKVPEEFV-LQHPTNGNPPTLFLVL 512 (655)
Q Consensus 437 FPRGFlWDEGFH~l~i~~W-D~~l~~eil~~W~dlm-~~dGWIpREQ-ILG~EARs~VP~eF~-vQ~p~~aNPPTl~l~l 512 (655)
+-.-|..|--|=.+-+..- +++++.+++.--..++ +++|.|+.+- |-|. | .+. .|.. -++-+++++
T Consensus 326 Yry~W~RDaa~t~~all~~G~~e~A~~~l~~L~~~Q~~~~G~~~~~y~i~G~------~-~w~~~Q~D---~~g~~l~~~ 395 (1020)
T 1ulv_A 326 YHAVWARDMYQSVTALLAAGDEEAAARGVEWLFTYQQQPDGHFPQTSRVDGT------I-GQNGIQLD---ETAFPILLA 395 (1020)
T ss_dssp TCSBCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTCCTTSCCCSCBCTTSC------B-CCCCCBTH---HHHHHHHHH
T ss_pred CceEccchHHHHHHHHHHcCCHHHHHHHHHHHHHHhcCCCCCeeeEEecCCC------c-CCCCccCc---cchHHHHHH
Confidence 4445667888887777777 8999998887667788 8899887764 4442 2 121 2332 233333333
Q ss_pred HHHHHHHHhccccccchhHHHHHHHHHHH-HHHHHHHHHHhhcCCCCCCcceeeeCCCCcccccCCCCCCCCCCCCCCCC
Q 006240 513 RELIYAIKKNKFTATESNEISSFLERALV-RLEAWFQWFNTTQSGKEMSSYFWHGRDTTTIRELNPKTLSSGLDDYPRAS 591 (655)
Q Consensus 513 ~~ll~~~~~~~~~~~~~~~~~~fL~~~yp-rL~~wy~WF~~TQ~G~~~~~YrWrGR~~~~~~elNp~tL~SGLDDYPRa~ 591 (655)
-.+ .. .+ ..+|| .+++=.+|-.+. |..++--+|--|..
T Consensus 396 ~~~----~~-----~d--------~~~w~~~v~~al~~i~~~--g~~~~~~~WEe~~g---------------------- 434 (1020)
T 1ulv_A 396 NQI----GR-----TD--------AGFYRNELKPAADYLVAA--GPKTPQERWEETGG---------------------- 434 (1020)
T ss_dssp HHH----TC-----CC--------HHHHHHTHHHHHHHHHHH--CSCBSBCTTSSCCB----------------------
T ss_pred HHH----Hh-----cC--------HHHHHHHHHHHHHHHHHh--CCCCChhhhcccCC----------------------
Confidence 332 11 11 56777 788888887654 33333334443311
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhccChhhHhhhccccc
Q 006240 592 HPSEEERHLDLRCWMLLAVDSLHSIAELFESSSEHKKEYGSTATLLSDFKFLISFILILH 651 (655)
Q Consensus 592 ~p~~~E~HvDL~sWm~~~a~~m~~iA~~lg~~~d~~~~y~~~~~~l~d~~~ln~~hws~~ 651 (655)
.-.|.=+.||.|+ +.+++||+.+|.++.+ ++|++.++.|. +.+++.-|+++
T Consensus 435 ----~~~~t~~~~~~AL--~~aa~lA~~~G~~~~a-~~w~~~Ad~i~--~~i~~~~w~~~ 485 (1020)
T 1ulv_A 435 ----YSTSTLASQIAAL--AAAADIAGKNGDAGSA-AVYRATADEWQ--RSTEKWMFTTN 485 (1020)
T ss_dssp ----EEHHHHHHHHHHH--HHHHHHHHHTTCHHHH-HHHHHHHHHHH--HTHHHHHEESS
T ss_pred ----cCHHHHHHHHHHH--HHHHHHHHHcCChhHH-HHHHHHHHHHH--HHHHHhCCCCc
Confidence 0123336788776 5688999999987765 89999999999 88999999986
No 10
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=35.73 E-value=1.5e+02 Score=32.97 Aligned_cols=115 Identities=15% Similarity=0.162 Sum_probs=73.9
Q ss_pred HHHHHHH-HHHHHHHHHHHhhcCCCC-CCcceeeeCCCCcc------cccCCCCCCCCC-CCCCCCC-CCCCccccchHH
Q 006240 534 SFLERAL-VRLEAWFQWFNTTQSGKE-MSSYFWHGRDTTTI------RELNPKTLSSGL-DDYPRAS-HPSEEERHLDLR 603 (655)
Q Consensus 534 ~fL~~~y-prL~~wy~WF~~TQ~G~~-~~~YrWrGR~~~~~------~elNp~tL~SGL-DDYPRa~-~p~~~E~HvDL~ 603 (655)
+|+...| ..+++=.++|...|.-.- .+.|++...+.... ...||.. ..|| --.||++ .+...-.|+=-.
T Consensus 200 ~~f~~~w~~av~~il~~l~~eq~~~~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~-~tGLi~S~fRPSDDa~~yg~~ipSN 278 (489)
T 2p0v_A 200 SVFSDEWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERALDTMTNDGWGNPVK-PVGLIASAFRPSDDATTFQFLVPSN 278 (489)
T ss_dssp TTSSHHHHHHHHHHHHHHHHTTCSSCSSCSCCCCCCBSCGGGSCHHHHTCSCCC-CSSCCCCSBCTTSCBCSSSEEHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHhcccCCCCCceEeecCCCcccccccCCCCCccC-CCCceeCCCCCCCcchhcCcchHHH
Confidence 4444445 577777888888676542 46788754432111 1235543 4566 4446654 122224666666
Q ss_pred HHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhccChhhHhhhccccc
Q 006240 604 CWMLLAVDSLHSIAELFESSSEHKKEYGSTATLLSDFKFLISFILILH 651 (655)
Q Consensus 604 sWm~~~a~~m~~iA~~lg~~~d~~~~y~~~~~~l~d~~~ln~~hws~~ 651 (655)
+-+...-+.+++|++.++.+.+.++++.+.++.+. +-+.++-|.++
T Consensus 279 ~~a~v~L~~aaeia~~v~~d~~la~~~~~lA~eI~--~gI~~~gv~~~ 324 (489)
T 2p0v_A 279 FFAVTSLRKAAEILNTVNRKPALAKECTALADEVE--KALKKYAVCNH 324 (489)
T ss_dssp HHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH--HHHHHHSEEEE
T ss_pred HHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH--HHHHHhCEecC
Confidence 66666667789999999987777789999999998 77767777665
Done!