BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006246
(654 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 523 bits (1346), Expect = e-147, Method: Compositional matrix adjust.
Identities = 262/629 (41%), Positives = 401/629 (63%), Gaps = 44/629 (6%)
Query: 49 LKQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFEL--ALKVFNSVHKPNVFVWNSVLR 106
L Q HAV +KSG +D + +++ A S + +L A K+FN + + N F WN+++R
Sbjct: 39 LSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIR 98
Query: 107 ACLEHNEPWRVI--SLYSEMVGVD-SKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNG 163
E +E +I +L+ EM+ + +PN+FT+P+V KAC+ T +EG Q+H +K G
Sbjct: 99 GFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYG 158
Query: 164 LCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFK 223
GD V S+ ++MY G + AR V+ + +I+ K++
Sbjct: 159 FGGDEFVMSNLVRMYVMCGFMKDAR----------VLFYKNIIE-----------KDMVV 197
Query: 224 ST----KDKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKE 279
T +D +N MI G+ R G + AR LF++M + ++W+ +I GY+ +G++K+
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 280 ALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVD 339
A+EVF EM++ I+P L VL A + LG+L+ G W+H + + + I +D VLG+AL+D
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317
Query: 340 MYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRIT 399
MY+KCG ++ A VFE + + V TW+AMI G A+HG+A DAI+ F KM++ +RP +
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 400 FACVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSM 459
+ +L+AC+H G+++ G + + M + G++P +EHYGC+VDLLGR+G L EAEE I +M
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 460 PMEPNAAVWEALLGACRKHGEVEFGERLGKILLEMEPQNRRC--------------DDVA 505
P++P+ +W+ALLGACR G VE G+R+ IL++M P + +V+
Sbjct: 438 PIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVS 497
Query: 506 KMRKLMKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEGYSP 565
+MR MKE+ I+ +PG S+ID++GV+HEF D SHP+ KEI ML +I +KL++ GY P
Sbjct: 498 EMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRP 557
Query: 566 NSSQVLFDIDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLIS 625
++QVL +++EE+KE YHSEK+A AFG I+T PG IR++KNLR+CEDCHS+ KLIS
Sbjct: 558 ITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLIS 617
Query: 626 KVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
KV+KR I VRDR R+HHF++G CSC D+W
Sbjct: 618 KVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 510 bits (1313), Expect = e-143, Method: Compositional matrix adjust.
Identities = 251/624 (40%), Positives = 377/624 (60%), Gaps = 47/624 (7%)
Query: 47 QHLKQAHAVILKSGHFQDHY-VSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVL 105
+ LKQ HA +LK+G QD Y ++ L C +++ A VF+ +P+ F+WN ++
Sbjct: 28 EELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMI 87
Query: 106 RACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLC 165
R +EP R + LY M+ + N +T+P++ KACS A +E Q+HA + K G
Sbjct: 88 RGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGY- 146
Query: 166 GDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKST 225
++DV N+LI+ Y G+ + A LF
Sbjct: 147 ------------------------------ENDVYAVNSLINSYAVTGNFKLAHLLFDRI 176
Query: 226 KDKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFN 285
+ + S+N++I G+ + G+ + A LF +M +K+ I+W+ +I GY + KEAL++F+
Sbjct: 177 PEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFH 236
Query: 286 EMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCG 345
EMQ ++P L+ L+ACA LGAL+QG WIH ++ + I +D+VLG L+DMYAKCG
Sbjct: 237 EMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCG 296
Query: 346 RLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLS 405
++ A +VF+++K K V W A+I G A HG +AI F +MQ+ ++P+ ITF VL+
Sbjct: 297 EMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLT 356
Query: 406 ACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNA 465
AC++ G+++ G M++ Y + P +EHYGCIVDLLGRAG L EA+ I MP++PNA
Sbjct: 357 ACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNA 416
Query: 466 AVWEALLGACRKHGEVEFGERLGKILLEMEP--------------QNRRCDDVAKMRKLM 511
+W ALL ACR H +E GE +G+IL+ ++P +++ D A+ R+LM
Sbjct: 417 VIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLM 476
Query: 512 KERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVL 571
KE+G+ PG S I + G HEF GD SHP++++I + + KL+ GY P ++L
Sbjct: 477 KEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEML 536
Query: 572 FD-IDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLISKVFKR 630
D +D++E+E HSEKLAI +G I T PG IR++KNLRVC+DCH TKLISK++KR
Sbjct: 537 LDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKR 596
Query: 631 DIIVRDRVRYHHFRNGKCSCNDFW 654
DI++RDR R+HHFR+GKCSC D+W
Sbjct: 597 DIVMRDRTRFHHFRDGKCSCGDYW 620
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 504 bits (1299), Expect = e-142, Method: Compositional matrix adjust.
Identities = 274/733 (37%), Positives = 412/733 (56%), Gaps = 92/733 (12%)
Query: 9 DLPHHLKPEEISATNIPTSEFSQKTILDILNTKCHTSWQHLKQAHAVILKSGHFQDHYVS 68
LP H S N PT+ + + ++ +C S + LKQ H ++++G F D Y +
Sbjct: 11 SLPRH---PNFSNPNQPTTNNERSRHISLIE-RC-VSLRQLKQTHGHMIRTGTFSDPYSA 65
Query: 69 GTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRACLEHNEPWRVISLYSEMVGVD 128
L A S F++ E A KVF+ + KPN F WN+++RA +P I + +MV
Sbjct: 66 SKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSES 125
Query: 129 S-KPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGL----------------CGDVH-- 169
PNK+T+P + KA + + G +H VK+ + CGD+
Sbjct: 126 QCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSA 185
Query: 170 ------------------------------------------VKSSGIQMYACFGCVNKA 187
VK+S + M K
Sbjct: 186 CKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI 245
Query: 188 RQ----------ILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKSTKDKNTGSYNAMI 237
R I ++ ++ NA++D Y KCG IE AK LF + ++K+ ++ M+
Sbjct: 246 RNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTML 305
Query: 238 SGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDK-IKPRK 296
G+A +E AR++ N M KD + W+A+I Y ++G EAL VF+E+Q K +K +
Sbjct: 306 DGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQ 365
Query: 297 FVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFED 356
L L+ACA +GAL+ G WIH ++K++ I ++ + +AL+ MY+KCG L+ + +VF
Sbjct: 366 ITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNS 425
Query: 357 MKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRG 416
++ ++VF W+AMIGGLAMHG ++A+++F+KMQ ++P+ +TF V AC+H G++D
Sbjct: 426 VEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEA 485
Query: 417 LQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACR 476
M+ YGI PE +HY CIVD+LGR+GYL +A + I +MP+ P+ +VW ALLGAC+
Sbjct: 486 ESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACK 545
Query: 477 KHGEVEFGERLGKILLEMEPQNR--------------RCDDVAKMRKLMKERGIKTNPGS 522
H + E LLE+EP+N + ++V+++RK M+ G+K PG
Sbjct: 546 IHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGC 605
Query: 523 SMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVLFDIDEEE-KET 581
S I+++G+IHEF +GD +HP +++Y L +++EKLK GY P SQVL I+EEE KE
Sbjct: 606 SSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQ 665
Query: 582 APKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYH 641
+ HSEKLAI +G I+T+ IRVIKNLRVC DCHS KLIS+++ R+IIVRDR R+H
Sbjct: 666 SLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFH 725
Query: 642 HFRNGKCSCNDFW 654
HFRNG+CSCNDFW
Sbjct: 726 HFRNGQCSCNDFW 738
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 504 bits (1297), Expect = e-141, Method: Compositional matrix adjust.
Identities = 280/737 (37%), Positives = 418/737 (56%), Gaps = 92/737 (12%)
Query: 5 VTTTDLPHHLKPEEISATNIPTSEFSQKTILDILNTKCHTSWQHLKQAHAVILKSGHFQD 64
V ++ P H P S+++ P L +L+ C T Q L+ HA ++K G
Sbjct: 10 VPSSSYPFHFLP---SSSDPPYDSIRNHPSLSLLHN-CKT-LQSLRIIHAQMIKIGLHNT 64
Query: 65 HYVSGTLVK-CHANSRFSNFELALKVFNSVHKPNVFVWNSVLRACLEHNEPWRVISLYSE 123
+Y L++ C + F A+ VF ++ +PN+ +WN++ R ++P + LY
Sbjct: 65 NYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVC 124
Query: 124 MVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMY----- 178
M+ + PN +T+P V K+C+ ++A KEG Q+H HV+K G D++V +S I MY
Sbjct: 125 MISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGR 184
Query: 179 --------------------------ACFGCVNKARQILDDGSKSDVICWNALIDGYLKC 212
A G + A+++ D+ DV+ WNA+I GY +
Sbjct: 185 LEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAET 244
Query: 213 GDIEGAKELFKSTKDKN-----------------TGS----------------------Y 233
G+ + A ELFK N +GS
Sbjct: 245 GNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIV 304
Query: 234 NAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIK 293
NA+I +++ G E A LF + KD I+W+ +I GYT YKEAL +F EM R
Sbjct: 305 NALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 364
Query: 294 PRKFVLSCVLAACASLGALDQGIWIHDHVKR--NSICVDAVLGTALVDMYAKCGRLDMAW 351
P + +L ACA LGA+D G WIH ++ + + + L T+L+DMYAKCG ++ A
Sbjct: 365 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAH 424
Query: 352 KVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAG 411
+VF + K + +WNAMI G AMHGRAD + +LF +M++ ++PD ITF +LSAC+H+G
Sbjct: 425 QVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSG 484
Query: 412 MIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEAL 471
M+D G M Q Y + P++EHYGC++DLLG +G EAEE+I+ M MEP+ +W +L
Sbjct: 485 MLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSL 544
Query: 472 LGACRKHGEVEFGERLGKILLEMEPQNR--------------RCDDVAKMRKLMKERGIK 517
L AC+ HG VE GE + L+++EP+N R ++VAK R L+ ++G+K
Sbjct: 545 LKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMK 604
Query: 518 TNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVLFDIDEE 577
PG S I+++ V+HEF GD HP+ +EIY ML+++ L+ G+ P++S+VL +++EE
Sbjct: 605 KVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEE 664
Query: 578 EKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDR 637
KE A ++HSEKLAIAFG I+T PG + ++KNLRVC +CH ATKLISK++KR+II RDR
Sbjct: 665 WKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDR 724
Query: 638 VRYHHFRNGKCSCNDFW 654
R+HHFR+G CSCND+W
Sbjct: 725 TRFHHFRDGVCSCNDYW 741
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 467 bits (1202), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/626 (37%), Positives = 363/626 (57%), Gaps = 47/626 (7%)
Query: 45 SWQHLKQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSV 104
+++ ++Q HA + G +D ++ G VK A S + A ++ + KP +F NS+
Sbjct: 18 TFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSM 77
Query: 105 LRACLEHNEPWRVISLYSEMV--GVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKN 162
+RA + P + Y ++ G D KP+ +T + +AC+ + G+QVH ++
Sbjct: 78 IRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRR 137
Query: 163 GLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELF 222
G D HV++ I +YA GC++ ++ + D +C A++ +CGD+ +F
Sbjct: 138 GFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDV-----VF 192
Query: 223 KSTKDKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALE 282
ARKLF M ++D I W+A+I GY + G +EAL
Sbjct: 193 --------------------------ARKLFEGMPERDPIAWNAMISGYAQVGESREALN 226
Query: 283 VFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYA 342
VF+ MQ + +K + VL+AC LGALDQG W H +++RN I + L T LVD+YA
Sbjct: 227 VFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYA 286
Query: 343 KCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFAC 402
KCG ++ A +VF M+ K V+TW++ + GLAM+G + +ELF M+++ + P+ +TF
Sbjct: 287 KCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVS 346
Query: 403 VLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPME 462
VL C+ G +D G + M+ +GI+P++EHYGC+VDL RAG L +A +I MPM+
Sbjct: 347 VLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMK 406
Query: 463 PNAAVWEALLGACRKHGEVEFGERLGKILLEMEPQNRRC--------------DDVAKMR 508
P+AAVW +LL A R + +E G K +LE+E N D+V+ +R
Sbjct: 407 PHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVR 466
Query: 509 KLMKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSS 568
+ MK +G++ PG S+++VNG +HEF GD SHP+ +I + K I +L++ GY +++
Sbjct: 467 QSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTT 526
Query: 569 QVLFDIDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLISKVF 628
V+FDIDEEEKE A HSEK AIAFG ++ IR++KNLRVC DCH + +ISK+F
Sbjct: 527 PVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIF 586
Query: 629 KRDIIVRDRVRYHHFRNGKCSCNDFW 654
R+IIVRDR R+HHF++G CSCN FW
Sbjct: 587 NREIIVRDRNRFHHFKDGHCSCNGFW 612
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 249/670 (37%), Positives = 379/670 (56%), Gaps = 57/670 (8%)
Query: 2 STKVTTTDLPHHLKPEEISATNIPTSEFSQKTILDILNTKCHTSWQHLKQAHAVILKSGH 61
S+ + T LP + ++S T L +L K S + Q HA IL+
Sbjct: 3 SSPLLATSLPQN----QLSTTATARFRLPPPEKLAVLIDKSQ-SVDEVLQIHAAILRHNL 57
Query: 62 FQDHYVSGTLVKCH-ANSRFSNFELALKVFNSVHKPNVFVWNSVLRACLEHNEPWRVISL 120
+K H A + +L +F+ P++F++ + + + + L
Sbjct: 58 LLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLL 117
Query: 121 YSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYAC 180
Y +++ + PN+FT+ ++ K+CS K G +H HV+K GL GI Y
Sbjct: 118 YVQLLSSEINPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGL---------GIDPYVA 164
Query: 181 FGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKSTKDKNTGSYNAMISGF 240
G L+D Y K GD+ A+++F +++ S AMI+ +
Sbjct: 165 TG----------------------LVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCY 202
Query: 241 ARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRD-KIKPRKFVL 299
A+ G E AR LF+ M ++D ++W+ +IDGY + G+ +AL +F ++ + K KP + +
Sbjct: 203 AKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITV 262
Query: 300 SCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKM 359
L+AC+ +GAL+ G WIH VK + I ++ + T L+DMY+KCG L+ A VF D
Sbjct: 263 VAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR 322
Query: 360 KEVFTWNAMIGGLAMHGRADDAIELFFKMQR-EKMRPDRITFACVLSACAHAGMIDRGLQ 418
K++ WNAMI G AMHG + DA+ LF +MQ ++P ITF L ACAHAG+++ G++
Sbjct: 323 KDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIR 382
Query: 419 ALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKH 478
M Q YGI P++EHYGC+V LLGRAG L A E I +M M+ ++ +W ++LG+C+ H
Sbjct: 383 IFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLH 442
Query: 479 GEVEFGERLGKILLEMEPQNRRC--------------DDVAKMRKLMKERGIKTNPGSSM 524
G+ G+ + + L+ + +N + VAK+R LMKE+GI PG S
Sbjct: 443 GDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGIST 502
Query: 525 IDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVLFDIDEEEKETAPK 584
I++ +HEFR GD H + KEIY ML+KI E++K GY PN++ VL D++E EKE + +
Sbjct: 503 IEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQ 562
Query: 585 YHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYHHFR 644
HSE+LAIA+G I+T PG+ +++ KNLRVC DCH+ TKLISK+ R I++RDR R+HHF
Sbjct: 563 VHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFT 622
Query: 645 NGKCSCNDFW 654
+G CSC DFW
Sbjct: 623 DGSCSCGDFW 632
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/631 (37%), Positives = 380/631 (60%), Gaps = 51/631 (8%)
Query: 44 TSWQHLKQAHAVILKSGHFQDHYVSGTLVK-CHANSRFSN----FELALKVFNSVHKPNV 98
+S+ LK H +L++ D +V+ L+ C +S F+ A +F+ + PN+
Sbjct: 23 SSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNL 82
Query: 99 FVWNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAH 158
FV+N ++R EP + Y++M+ P+ T+P + KA S E G Q H+
Sbjct: 83 FVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQ 142
Query: 159 VVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGA 218
+V+ G DV+V+ N+L+ Y CG I A
Sbjct: 143 IVRFGFQNDVYVE-------------------------------NSLVHMYANCGFIAAA 171
Query: 219 KELFKSTKDKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYK 278
+F ++ S+ +M++G+ + G E AR++F+EM ++ TWS +I+GY K+ ++
Sbjct: 172 GRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFE 231
Query: 279 EALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALV 338
+A+++F M+R+ + + V+ V+++CA LGAL+ G +++V ++ + V+ +LGTALV
Sbjct: 232 KAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALV 291
Query: 339 DMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRI 398
DM+ +CG ++ A VFE + + +W+++I GLA+HG A A+ F +M P +
Sbjct: 292 DMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDV 351
Query: 399 TFACVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISS 458
TF VLSAC+H G++++GL+ M++ +GI+P +EHYGCIVD+LGRAG LAEAE I
Sbjct: 352 TFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILK 411
Query: 459 MPMEPNAAVWEALLGACRKHGEVEFGERLGKILLEMEPQNR--------------RCDDV 504
M ++PNA + ALLGAC+ + E ER+G +L++++P++ + D +
Sbjct: 412 MHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKI 471
Query: 505 AKMRKLMKERGIKTNPGSSMIDVNGVIHEFRTGDGS-HPQVKEIYLMLKKIIEKLKMEGY 563
+R +MKE+ +K PG S+I+++G I++F GD HP++ +I ++I+ K+++ GY
Sbjct: 472 ESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGY 531
Query: 564 SPNSSQVLFDIDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKL 623
N+ FD+DEEEKE++ HSEKLAIA+G + T PG TIR++KNLRVCEDCH+ TKL
Sbjct: 532 KGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKL 591
Query: 624 ISKVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
IS+V+ R++IVRDR R+HHFRNG CSC D+W
Sbjct: 592 ISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
>sp|Q9MAT2|PPR10_ARATH Pentatricopeptide repeat-containing protein At1g04840
OS=Arabidopsis thaliana GN=PCMP-H64 PE=2 SV=1
Length = 665
Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/624 (37%), Positives = 365/624 (58%), Gaps = 21/624 (3%)
Query: 49 LKQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRAC 108
L+ HA IL+ G V+ LV C +S + + +L +F + + N FV N+++R
Sbjct: 45 LRHVHAQILRRGVLSSR-VAAQLVSC--SSLLKSPDYSLSIFRNSEERNPFVLNALIRGL 101
Query: 109 LEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCGDV 168
E+ + + M+ + KP++ T+P V K+ S G +HA +KN + D
Sbjct: 102 TENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDS 161
Query: 169 HVKSSGIQMYACFGCVNKARQILDDG----SKSDVICWNALIDGYLKCGDIEGAKELFKS 224
V+ S + MYA G + A Q+ ++ K ++ WN LI+GY + D+ A LF+S
Sbjct: 162 FVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRS 221
Query: 225 TKDKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVF 284
++N+GS++ +I G+ G A++LF M +K+ ++W+ +I+G+++ G Y+ A+ +
Sbjct: 222 MPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTY 281
Query: 285 NEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKC 344
EM +KP ++ ++ VL+AC+ GAL GI IH ++ N I +D +GTALVDMYAKC
Sbjct: 282 FEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKC 341
Query: 345 GRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVL 404
G LD A VF +M K++ +W AMI G A+HGR AI+ F +M +PD + F VL
Sbjct: 342 GELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVL 401
Query: 405 SACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPN 464
+AC ++ +D GL M+ Y I+P ++HY +VDLLGRAG L EA E++ +MP+ P+
Sbjct: 402 TACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPD 461
Query: 465 AAVWEALLGACRKHGEVEFGERLGKILLEMEPQ--------------NRRCDDVAKMRKL 510
W AL AC+ H E + + LLE++P+ DV K R
Sbjct: 462 LTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLS 521
Query: 511 MKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSSQV 570
+++R + + G S I+++G +++F GD SH +EI L L +II +GY+P +
Sbjct: 522 LQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWS 581
Query: 571 LFDIDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLISKVFKR 630
+ DI+EEEKE HSEKLA+ GF+ T PG TIR+IKNLR+C DCHS K +SK+ +R
Sbjct: 582 IHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQR 641
Query: 631 DIIVRDRVRYHHFRNGKCSCNDFW 654
DI++RD ++HHF++G+CSC D+W
Sbjct: 642 DILLRDARQFHHFKDGRCSCGDYW 665
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 446 bits (1147), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/689 (34%), Positives = 373/689 (54%), Gaps = 57/689 (8%)
Query: 19 ISATNIPTSEFSQKTILDILNTKCHTSWQHLKQAHAVILKSGHFQDHYVSGTLVKCHANS 78
+S +P++ + I +++ C + HLKQ H ++ D ++ L+K
Sbjct: 1 MSIVTVPSATSKVQQIKTLISVACTVN--HLKQIHVSLINHHLHHDTFLVNLLLKRTLFF 58
Query: 79 RFSNFELALKVFNSVHKPNVFVWNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPT 138
R + + L F+ PN+F++NS++ + ++ + L+ + + FT+P
Sbjct: 59 RQTKYSYLL--FSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPL 116
Query: 139 VFKACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSD 198
V KAC+ + K G+ +H+ VVK G DV +S + +Y+ G +N A ++ D+
Sbjct: 117 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS 176
Query: 199 VICWNALIDGYLKCGDIEGAKELFKSTKD------------------------------- 227
V+ W AL GY G A +LFK +
Sbjct: 177 VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVK 236
Query: 228 --------KNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKE 279
KN+ +++ +A+ G+ E+AR +F+ M +KD +TWS +I GY + + KE
Sbjct: 237 YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKE 296
Query: 280 ALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVD 339
+E+F +M ++ +KP +F + L++CASLGALD G W + R+ + + AL+D
Sbjct: 297 GIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALID 356
Query: 340 MYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRIT 399
MYAKCG + ++VF++MK K++ NA I GLA +G + +F + ++ + PD T
Sbjct: 357 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGST 416
Query: 400 FACVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSM 459
F +L C HAG+I GL+ + +Y + VEHYGC+VDL GRAG L +A +I M
Sbjct: 417 FLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDM 476
Query: 460 PMEPNAAVWEALLGACRKHGEVEFGERLGKILLEMEPQNR--------------RCDDVA 505
PM PNA VW ALL CR + + E + K L+ +EP N R D+ A
Sbjct: 477 PMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAA 536
Query: 506 KMRKLMKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEGYSP 565
++R +M ++G+K PG S I++ G +HEF D SHP +IY L+ + ++++ G+ P
Sbjct: 537 EVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVP 596
Query: 566 NSSQVLFDIDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLIS 625
+ V FD++EEEKE YHSEKLA+A G I+TD G IRV+KNLRVC DCH KLIS
Sbjct: 597 TTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLIS 656
Query: 626 KVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
K+ +R+I+VRD R+H F NG CSCND+W
Sbjct: 657 KITRREIVVRDNNRFHCFTNGSCSCNDYW 685
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 255/721 (35%), Positives = 384/721 (53%), Gaps = 95/721 (13%)
Query: 25 PTSEFSQKTILDILNTKCHTSWQHLKQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFE 84
P + + TIL+ L+ C S H+KQ HA IL++ +H ++ L +S N
Sbjct: 6 PIASTAANTILEKLSF-C-KSLNHIKQLHAHILRT--VINHKLNSFLFNLSVSSSSINLS 61
Query: 85 LALKVFNSV-HKPNVFVWNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKAC 143
AL VF+S+ P V+N LR +EP I Y + V + ++F++ + KA
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 144 SITEADKEGVQVHA----------HVVKNGL------CG---------------DVHVKS 172
S A EG+++H V+ G CG DV +
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 173 SGIQMYACFGCVNKARQILDDGSKSDVI-------------------------------- 200
+ I+ Y FG V++A ++ ++ S+V+
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 201 -------CWNALIDGYLKCGDIEGAKELFKSTKDKNTGSYNAMISGFARFGRFEEARKLF 253
AL+ Y G ++ A+E F+ +N AM+SG+++ GR ++A+ +F
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 254 NEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALD 313
++ KD + W+ +I Y + Y +EAL VF EM IKP + V++ACA+LG LD
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 314 QGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLA 373
+ W+H + N + + + AL++MYAKCG LD VFE M + V +W++MI L+
Sbjct: 362 KAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALS 421
Query: 374 MHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGIDPEV 433
MHG A DA+ LF +M++E + P+ +TF VL C+H+G+++ G + M Y I P++
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKL 481
Query: 434 EHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGERLGKILLE 493
EHYGC+VDL GRA L EA EVI SMP+ N +W +L+ ACR HGE+E G+ K +LE
Sbjct: 482 EHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILE 541
Query: 494 MEP--------------QNRRCDDVAKMRKLMKERGIKTNPGSSMIDVNGVIHEFRTGDG 539
+EP + +R +DV +R++M+E+ + G S ID NG HEF GD
Sbjct: 542 LEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDK 601
Query: 540 SHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVLFDIDEEEKETAPKYHSEKLAIAFGFIN- 598
H Q EIY L +++ KLK+ GY P+ VL D++EEEK+ +HSEKLA+ FG +N
Sbjct: 602 RHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNE 661
Query: 599 -----TDPGATIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYHHFRNGKCSCNDF 653
D IR++KNLRVCEDCH KL+SKV++R+IIVRDR R+H ++NG CSC D+
Sbjct: 662 EKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDY 721
Query: 654 W 654
W
Sbjct: 722 W 722
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/627 (35%), Positives = 346/627 (55%), Gaps = 51/627 (8%)
Query: 79 RFSNFELALKVFNSVHKPNVFVWNSVLRACLEHNEPWRVISLYSEMVGVD-SKPNKFTYP 137
+F E A KVF+ + + + +WN+++ ++ I ++ +++ ++ + T
Sbjct: 166 KFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLL 225
Query: 138 TVFKACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKS 197
+ A + + + G+Q+H+ K G +V + I +Y+ G + + + K
Sbjct: 226 DILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKP 285
Query: 198 DVICWNALIDGYLKCGDIEGAKELFK---------------------------------- 223
D++ +NA+I GY G+ E + LFK
Sbjct: 286 DIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYC 345
Query: 224 --STKDKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEAL 281
S + A+ + +++ E ARKLF+E +K +W+A+I GYT++G ++A+
Sbjct: 346 LKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAI 405
Query: 282 EVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMY 341
+F EMQ+ + P ++C+L+ACA LGAL G W+HD V+ + TAL+ MY
Sbjct: 406 SLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMY 465
Query: 342 AKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFA 401
AKCG + A ++F+ M K TWN MI G +HG+ +A+ +F++M + P +TF
Sbjct: 466 AKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFL 525
Query: 402 CVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPM 461
CVL AC+HAG++ G + M YG +P V+HY C+VD+LGRAG+L A + I +M +
Sbjct: 526 CVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSI 585
Query: 462 EPNAAVWEALLGACRKHGEVEFGERLGKILLEMEPQN--------------RRCDDVAKM 507
EP ++VWE LLGACR H + + + L E++P N R A +
Sbjct: 586 EPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATV 645
Query: 508 RKLMKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNS 567
R+ K+R + PG ++I++ H F +GD SHPQVKEIY L+K+ K++ GY P +
Sbjct: 646 RQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPET 705
Query: 568 SQVLFDIDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLISKV 627
L D++EEE+E K HSE+LAIAFG I T+PG IR+IKNLRVC DCH+ TKLISK+
Sbjct: 706 ELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKI 765
Query: 628 FKRDIIVRDRVRYHHFRNGKCSCNDFW 654
+R I+VRD R+HHF++G CSC D+W
Sbjct: 766 TERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/517 (25%), Positives = 230/517 (44%), Gaps = 54/517 (10%)
Query: 20 SATNIPTSEF-SQKTILDILNTKCHTSWQHLKQAHAVILKSGHFQDHYVSGTLVKCHANS 78
SAT T+ S+ T LD K TS HL Q HA I+ G D + L + S
Sbjct: 8 SATAETTAALISKNTYLDFF--KRSTSISHLAQTHAQIILHGFRNDISLLTKLTQ--RLS 63
Query: 79 RFSNFELALKVFNSVHKPNVFVWNSVLRACLEHNEPWRVISLYSEMV-GVDSKPNKFTYP 137
A +F SV +P+VF++N ++R + P +S+++ + D KPN TY
Sbjct: 64 DLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYA 123
Query: 138 TVFKACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKS 197
A S D+ G +H V +G ++ + S+ ++MY F V AR++ D +
Sbjct: 124 FAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEK 183
Query: 198 DVICWNALIDGYLKCGDIEGAKELFKSTKDKN---------------------------- 229
D I WN +I GY K + ++F+ +++
Sbjct: 184 DTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQI 243
Query: 230 ------TGSYN------AMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYY 277
TG Y+ IS +++ G+ + LF E D + ++A+I GYT +G
Sbjct: 244 HSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGET 303
Query: 278 KEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTAL 337
+ +L +F E+ + R L ++ L + IH + +++ A + TAL
Sbjct: 304 ELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTAL 360
Query: 338 VDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDR 397
+Y+K ++ A K+F++ K + +WNAMI G +G +DAI LF +MQ+ + P+
Sbjct: 361 TTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNP 420
Query: 398 ITFACVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVIS 457
+T C+LSACA G + G + + + + + + ++ + + G +AEA +
Sbjct: 421 VTITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD 479
Query: 458 SMPMEPNAAVWEALLGACRKHGEVEFGERLGKILLEM 494
M + N W ++ HG+ G+ I EM
Sbjct: 480 LMT-KKNEVTWNTMISGYGLHGQ---GQEALNIFYEM 512
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 14/263 (5%)
Query: 53 HAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRACLEHN 112
H LKS VS L + S+ + E A K+F+ + ++ WN+++ ++
Sbjct: 342 HGYCLKSNFLSHASVSTALTTVY--SKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399
Query: 113 EPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCGDVHVKS 172
ISL+ EM + PN T + AC+ A G VH V ++V +
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVST 459
Query: 173 SGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGA----KELFKSTKDK 228
+ I MYA G + +AR++ D +K + + WN +I GY G + A E+ S
Sbjct: 460 ALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITP 519
Query: 229 NTGSYNAMISGFARFGRFEEARKLFNEMNDKDEIT-----WSAIIDGYTKDGYYKEALEV 283
++ ++ + G +E ++FN M + ++ ++D + G+ + AL+
Sbjct: 520 TPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQF 579
Query: 284 FNEMQRDKIKPRKFVLSCVLAAC 306
M I+P V +L AC
Sbjct: 580 IEAMS---IEPGSSVWETLLGAC 599
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/637 (36%), Positives = 375/637 (58%), Gaps = 19/637 (2%)
Query: 35 LDILNTKCHTSWQHLKQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVH 94
L +LN+ C + + L Q H + +K G D Y +G L+ A S A ++
Sbjct: 9 LSLLNS-C-KNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFP 66
Query: 95 KPNVFVWNSVLRACLEHNEPWRVISLYSEMVGVDSK-PNKFTYPTVFKACSITEADKEGV 153
+P+ F++N+++R E +EP ++++ EM+ P+ F++ V KA + + G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 154 QVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCG 213
Q+H +K+GL + V ++ I MY GCV AR++ D+ + +++ WNA+I +
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN 186
Query: 214 DIEGAKELFKSTKDKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTK 273
D+ GA+E+F +N S+N M++G+ + G E A+++F+EM +D+++WS +I G
Sbjct: 187 DVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAH 246
Query: 274 DGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVL 333
+G + E+ F E+QR + P + L+ VL+AC+ G+ + G +H V++ +
Sbjct: 247 NGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSV 306
Query: 334 GTALVDMYAKCGRLDMAWKVFEDMKMKE-VFTWNAMIGGLAMHGRADDAIELFFKMQREK 392
AL+DMY++CG + MA VFE M+ K + +W +MI GLAMHG+ ++A+ LF +M
Sbjct: 307 NNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYG 366
Query: 393 MRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEA 452
+ PD I+F +L AC+HAG+I+ G + M+++Y I+PE+EHYGC+VDL GR+G L +A
Sbjct: 367 VTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKA 426
Query: 453 EEVISSMPMEPNAAVWEALLGACRKHGEVEFGERLGKILLEMEPQNR------------- 499
+ I MP+ P A VW LLGAC HG +E E++ + L E++P N
Sbjct: 427 YDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATA 486
Query: 500 -RCDDVAKMRKLMKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKL 558
+ DVA +RK M + IK S+++V +++F G+ E + LK+II +L
Sbjct: 487 GKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRL 546
Query: 559 KME-GYSPNSSQVLFDIDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDC 617
K E GY+P + L+D++EEEKE HSEKLA+AF GA IR++KNLR+C DC
Sbjct: 547 KDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDC 606
Query: 618 HSATKLISKVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
H+ KL SKV+ +I+VRDR R+H F++G CSC D+W
Sbjct: 607 HAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 254/688 (36%), Positives = 375/688 (54%), Gaps = 103/688 (14%)
Query: 1 MSTKVTTTDLPHHLKPEEISATNIPTSEFSQKTILDILNTKCHTSWQHLKQAHAVILKSG 60
MS + L H+ P S+ + T+ + I + T S LKQ HA L++
Sbjct: 20 MSIGLLVHPLSPHIPPA--SSPSASTAGNHHQRIFSLAETCSDMS--QLKQLHAFTLRTT 75
Query: 61 HFQDH---YVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRACLEH-NEPWR 116
+ ++ ++ G +++ +S FS+ A +VF+S+ + F+WN+++RAC +
Sbjct: 76 YPEEPATLFLYGKILQ--LSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEE 133
Query: 117 VISLYSEMVGV-DSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGI 175
LY +M+ +S P+K T+P V KAC+ EG QVH +VK+
Sbjct: 134 AFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKH------------- 180
Query: 176 QMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKSTKDKNTGSYNA 235
G DV N LI Y CG ++
Sbjct: 181 ------------------GFGGDVYVNNGLIHLYGSCGCLD------------------- 203
Query: 236 MISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPR 295
ARK+F+EM ++ ++W+++ID + G Y AL++F EMQR +P
Sbjct: 204 ------------LARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPD 250
Query: 296 KFVLSCVLAACASLGALDQGIWIHDHVKRN---SICVDAVLGTALVDMYAKCGRLDMAWK 352
+ + VL+ACA LG+L G W H + R + +D ++ +L++MY KCG L MA +
Sbjct: 251 GYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQ 310
Query: 353 VFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKM--QREKMRPDRITFACVLSACAHA 410
VF+ M+ +++ +WNAMI G A HGRA++A+ F +M +RE +RP+ +TF +L AC H
Sbjct: 311 VFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHR 370
Query: 411 GMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEA 470
G +++G Q M + Y I+P +EHYGCIVDL+ RAGY+ EA +++ SMPM+P+A +W +
Sbjct: 371 GFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRS 430
Query: 471 LLGACRKHG-EVEFGERLGKILLEMEPQNR---------------------RCDDVAKMR 508
LL AC K G VE E + + ++ + N R +DV +R
Sbjct: 431 LLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVR 490
Query: 509 KLMKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSS 568
KLM E GI+ PG S I++NG+ HEF GD SHPQ K+IY LK I ++L+ GY P+ S
Sbjct: 491 KLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRS 550
Query: 569 QV-LFD-IDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLISK 626
Q L D ++ KE + + HSE+LAIAFG IN P IR+ KNLRVC DCH TKLISK
Sbjct: 551 QAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISK 610
Query: 627 VFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
VF +IIVRDRVR+HHF++G CSC D+W
Sbjct: 611 VFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/666 (35%), Positives = 368/666 (55%), Gaps = 36/666 (5%)
Query: 21 ATNIPTSEFSQKT-------ILDILNTKCHTSWQHLKQAHAVILKSGHFQDHYVSGTLVK 73
++++P E QK+ + +L+T + + L+ H+ I+ + + L++
Sbjct: 25 SSSLPKLELDQKSPQETVFLLGQVLDT--YPDIRTLRTVHSRIILEDLRCNSSLGVKLMR 82
Query: 74 CHANSRFSNFELALKVFNSVHKPNVFVWNSVLRACLEHNEPWRVISLYSEMVGVDSKPNK 133
+A+ + A KVF+ + + NV + N ++R+ + + + ++ M G + +P+
Sbjct: 83 AYAS--LKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDH 140
Query: 134 FTYPTVFKACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDD 193
+T+P V KACS + G ++H K GL + V + + MY G +++AR +LD+
Sbjct: 141 YTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDE 200
Query: 194 GSKSDVICWNALIDGYLKCGDIEGAKELFKSTKD----KNTGSYNAMISGFARFG--RFE 247
S+ DV+ WN+L+ GY + + A E+ + + + G+ +++ +
Sbjct: 201 MSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVM 260
Query: 248 EARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACA 307
+ +F +M K ++W+ +I Y K+ EA+E+++ M+ D +P ++ VL AC
Sbjct: 261 YVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACG 320
Query: 308 SLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNA 367
AL G IH +++R + + +L AL+DMYAKCG L+ A VFE+MK ++V +W A
Sbjct: 321 DTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTA 380
Query: 368 MIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMY 427
MI GR DA+ LF K+Q + PD I F L+AC+HAG+++ G M Y
Sbjct: 381 MISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHY 440
Query: 428 GIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGERL 487
I P +EH C+VDLLGRAG + EA I M MEPN VW ALLGACR H + + G
Sbjct: 441 KITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLA 500
Query: 488 GKILLEMEPQNR--------------RCDDVAKMRKLMKERGIKTNPGSSMIDVNGVIHE 533
L ++ P+ R ++V +R +MK +G+K NPG+S ++VN +IH
Sbjct: 501 ADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHT 560
Query: 534 FRTGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVLFDIDEEEKETAPKYHSEKLAIA 593
F GD SHPQ EIY L +++K+K GY P+S L D++EE+KET HSEKLAI
Sbjct: 561 FLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIV 620
Query: 594 FGFINT-----DPGATIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYHHFRNGKC 648
F +NT D TIR+ KNLR+C DCH A KLIS++ R+II+RD R+H FR G C
Sbjct: 621 FALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVC 680
Query: 649 SCNDFW 654
SC D+W
Sbjct: 681 SCGDYW 686
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/580 (38%), Positives = 346/580 (59%), Gaps = 55/580 (9%)
Query: 99 FVWNSVLRACLEH-NEPWR--VISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQV 155
F+WN ++RA + + + P R IS+Y M P+ T+P + + G +
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRT 84
Query: 156 HAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDI 215
HA ++ GL D V++S + MY+ CGD+
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYS-------------------------------SCGDL 113
Query: 216 EGAKELFKSTKDKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDG 275
A+ +F + K+ ++N++++ +A+ G ++ARKLF+EM +++ I+WS +I+GY G
Sbjct: 114 RSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCG 173
Query: 276 YYKEALEVFNEMQRDK-----IKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVD 330
YKEAL++F EMQ K ++P +F +S VL+AC LGAL+QG W+H ++ + + +D
Sbjct: 174 KYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEID 233
Query: 331 AVLGTALVDMYAKCGRLDMAWKVFEDM-KMKEVFTWNAMIGGLAMHGRADDAIELFFKMQ 389
VLGTAL+DMYAKCG L+ A +VF + K+V ++AMI LAM+G D+ +LF +M
Sbjct: 234 IVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMT 293
Query: 390 -REKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGY 448
+ + P+ +TF +L AC H G+I+ G M + +GI P ++HYGC+VDL GR+G
Sbjct: 294 TSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGL 353
Query: 449 LAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGERLGKILLEMEPQNR--------- 499
+ EAE I+SMPMEP+ +W +LL R G+++ E K L+E++P N
Sbjct: 354 IKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNV 413
Query: 500 -----RCDDVAKMRKLMKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKI 554
R +V +R M+ +GI PG S ++V GV+HEF GD S + + IY ML +I
Sbjct: 414 YAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEI 473
Query: 555 IEKLKMEGYSPNSSQVLFDIDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVC 614
+++L+ GY ++ +VL D++E++KE A YHSEKLAIAF + T PG +R+IKNLR+C
Sbjct: 474 MQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRIC 533
Query: 615 EDCHSATKLISKVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
DCH K+ISK+F R+I+VRD R+HHFR+G CSC DFW
Sbjct: 534 GDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 145/323 (44%), Gaps = 29/323 (8%)
Query: 43 HTSWQHLKQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWN 102
++S L+ A V SG +D ++V +A + + A K+F+ + + NV W+
Sbjct: 107 YSSCGDLRSAQRVFDDSGS-KDLPAWNSVVNAYAKAGL--IDDARKLFDEMPERNVISWS 163
Query: 103 SVLRACLEHNEPWRVISLYSEMVGVDS-----KPNKFTYPTVFKACSITEADKEGVQVHA 157
++ + + + L+ EM +PN+FT TV AC A ++G VHA
Sbjct: 164 CLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHA 223
Query: 158 HVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDD-GSKSDVICWNALIDGYLKCGDIE 216
++ K + D+ + ++ I MYA G + +A+++ + GSK DV ++A+I G +
Sbjct: 224 YIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTD 283
Query: 217 GAKELFK--STKDK---NTGSYNAMISGFARFGRFEEARKLFNEMNDKDEIT-----WSA 266
+LF +T D N+ ++ ++ G E + F M ++ IT +
Sbjct: 284 ECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGC 343
Query: 267 IIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNS 326
++D Y + G KEA M ++P + +L+ LG + + +
Sbjct: 344 MVDLYGRSGLIKEAESFIASM---PMEPDVLIWGSLLSGSRMLGDIKTC----EGALKRL 396
Query: 327 ICVDAVLGTALV---DMYAKCGR 346
I +D + A V ++YAK GR
Sbjct: 397 IELDPMNSGAYVLLSNVYAKTGR 419
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/629 (37%), Positives = 342/629 (54%), Gaps = 63/629 (10%)
Query: 89 VFNS-VHKPNVFVWNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITE 147
+FN V K +VF WNSV+ + + +S M + P + ++P KACS
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 148 ADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALID 207
G Q H G D+ V S+ I MY+ G + AR++ D+ K +++ W ++I
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 208 GYLKCGDIEGAKELFKSTK----------------------------------------- 226
GY G+ A LFK
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 227 ----DKNTGSYNAMISGFARFGR--FEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEA 280
D+ N ++ +A+ G ARK+F+++ DKD +++++I+ Y + G EA
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 281 LEVFNEMQRDKIKP-RKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVD 339
EVF + ++K+ LS VL A + GAL G IHD V R + D ++GT+++D
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330
Query: 340 MYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRIT 399
MY KCGR++ A K F+ MK K V +W AMI G MHG A A+ELF M +RP+ IT
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 400 FACVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSM 459
F VL+AC+HAG+ G + M+ +G++P +EHYGC+VDLLGRAG+L +A ++I M
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
Query: 460 PMEPNAAVWEALLGACRKHGEVEFGERLGKILLEMEPQN--------------RRCDDVA 505
M+P++ +W +LL ACR H VE E L E++ N R DV
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVE 510
Query: 506 KMRKLMKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEGYSP 565
++R +MK RG+ PG S++++NG +H F GD HPQ ++IY L ++ KL GY
Sbjct: 511 RVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570
Query: 566 NSSQVLFDIDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLIS 625
N+S V D+DEEEKE + HSEKLAIAFG +NT PG+T+ V+KNLRVC DCH+ KLIS
Sbjct: 571 NTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLIS 630
Query: 626 KVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
K+ R+ +VRD R+HHF++G CSC D+W
Sbjct: 631 KIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 159/378 (42%), Gaps = 56/378 (14%)
Query: 50 KQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRACL 109
KQ H G+ D +VS L+ ++ E A KVF+ + K N+ W S++R
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTC--GKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 110 EHNEPWRVISLYSEMVGVDSKP-------NKFTYPTVFKACSITEADKEGVQVHAHVVKN 162
+ +SL+ +++ VD + +V ACS A +H+ V+K
Sbjct: 154 LNGNALDAVSLFKDLL-VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKR 212
Query: 163 GLCGDVHVKSSGIQMYA--CFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKE 220
G V V ++ + YA G V AR+I D D + +N+++ Y + G A E
Sbjct: 213 GFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFE 272
Query: 221 LFKSTKDKNTGSYNA----------------------------------------MISGF 240
+F+ ++NA +I +
Sbjct: 273 VFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMY 332
Query: 241 ARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLS 300
+ GR E ARK F+ M +K+ +W+A+I GY G+ +ALE+F M ++P
Sbjct: 333 CKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFV 392
Query: 301 CVLAACASLGALDQGIWIHDHVKRNSICVDAVLG--TALVDMYAKCGRLDMAWKVFEDMK 358
VLAAC+ G +G W + + V+ L +VD+ + G L A+ + + MK
Sbjct: 393 SVLAACSHAGLHVEG-WRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK 451
Query: 359 MK-EVFTWNAMIGGLAMH 375
MK + W++++ +H
Sbjct: 452 MKPDSIIWSSLLAACRIH 469
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/672 (35%), Positives = 366/672 (54%), Gaps = 70/672 (10%)
Query: 50 KQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRACL 109
KQ HA L+ G + ++ TLV + + + + S ++ WN+VL +
Sbjct: 222 KQVHAYGLRKGEL-NSFIINTLVAMYG--KLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 110 EHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNG-LCGDV 168
++ + + EMV +P++FT +V ACS E + G ++HA+ +KNG L +
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 169 HVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGY-----------LKCGDIEG 217
V S+ + MY V R++ D + WNA+I GY L G E
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 218 AKELFKSTK-----------------------------DKNTGSYNAMISGFARFGRFEE 248
A L ST D++ N ++ ++R G+ +
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 458
Query: 249 ARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQ-----------RDKIKPRKF 297
A ++F +M D+D +TW+ +I GY ++++AL + ++MQ R +KP
Sbjct: 459 AMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSI 518
Query: 298 VLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDM 357
L +L +CA+L AL +G IH + +N++ D +G+ALVDMYAKCG L M+ KVF+ +
Sbjct: 519 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 578
Query: 358 KMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGL 417
K V TWN +I MHG +AI+L M + ++P+ +TF V +AC+H+GM+D GL
Sbjct: 579 PQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGL 638
Query: 418 QALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPN-AAVWEALLGACR 476
+ M+ YG++P +HY C+VDLLGRAG + EA ++++ MP + N A W +LLGA R
Sbjct: 639 RIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASR 698
Query: 477 KHGEVEFGERLGKILLEMEPQNRR--------------CDDVAKMRKLMKERGIKTNPGS 522
H +E GE + L+++EP D ++R+ MKE+G++ PG
Sbjct: 699 IHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGC 758
Query: 523 SMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVLFDIDEEEKETA 582
S I+ +H+F GD SHPQ +++ L+ + E+++ EGY P++S VL +++E+EKE
Sbjct: 759 SWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEIL 818
Query: 583 PKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYHH 642
HSEKLAIAFG +NT PG IRV KNLRVC DCH ATK ISK+ R+II+RD R+H
Sbjct: 819 LCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHR 878
Query: 643 FRNGKCSCNDFW 654
F+NG CSC D+W
Sbjct: 879 FKNGTCSCGDYW 890
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 116/486 (23%), Positives = 220/486 (45%), Gaps = 61/486 (12%)
Query: 50 KQAHAVILKSGHFQDHY-VSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRAC 108
KQ HA + K G+ D V+ TLV + + +F KVF+ + + N WNS++ +
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLY--RKCGDFGAVYKVFDRISERNQVSWNSLISSL 174
Query: 109 LEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACS---ITEADKEGVQVHAHVVKNGLC 165
+ + + M+ + +P+ FT +V ACS + E G QVHA+ ++ G
Sbjct: 175 CSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL 234
Query: 166 GDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDG------------YLKCG 213
+ + ++ + MY G + ++ +L D++ WN ++ YL+
Sbjct: 235 -NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREM 293
Query: 214 DIEGAK----------------ELFKSTK------------DKNTGSYNAMISGFARFGR 245
+EG + E+ ++ K D+N+ +A++ + +
Sbjct: 294 VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ 353
Query: 246 FEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDK-IKPRKFVLSCVLA 304
R++F+ M D+ W+A+I GY+++ + KEAL +F M+ + ++ V+
Sbjct: 354 VLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 413
Query: 305 ACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFT 364
AC GA + IH V + + D + L+DMY++ G++D+A ++F M+ +++ T
Sbjct: 414 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVT 473
Query: 365 WNAMIGGLAMHGRADDAIELFFKMQ-----------REKMRPDRITFACVLSACAHAGMI 413
WN MI G +DA+ L KMQ R ++P+ IT +L +CA +
Sbjct: 474 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 533
Query: 414 DRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLG 473
+G + Y + + +V +VD+ + G L + +V +P + N W ++
Sbjct: 534 AKGKEIHAYAIK-NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIM 591
Query: 474 ACRKHG 479
A HG
Sbjct: 592 AYGMHG 597
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 157/390 (40%), Gaps = 74/390 (18%)
Query: 96 PNVFV--------WNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITE 147
P++F+ W +LR+ + N + Y +M+ + KP+ + +P + KA + +
Sbjct: 52 PSIFISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQ 111
Query: 148 ADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALID 207
+ G Q+HAHV K G D V N L++
Sbjct: 112 DMELGKQIHAHVYKFGYGVD------------------------------SVTVANTLVN 141
Query: 208 GYLKCGDIEGAKELFKSTKDKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAI 267
Y KCGD F K+F+ ++++++++W+++
Sbjct: 142 LYRKCGD-------------------------------FGAVYKVFDRISERNQVSWNSL 170
Query: 268 IDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLG---ALDQGIWIHDHVKR 324
I ++ ALE F M + ++P F L V+ AC++L L G +H + R
Sbjct: 171 ISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR 230
Query: 325 NSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIEL 384
++ T LV MY K G+L + + +++ TWN ++ L + + +A+E
Sbjct: 231 KGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEY 289
Query: 385 FFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLG 444
+M E + PD T + VL AC+H M+ G + Y + +D +VD+
Sbjct: 290 LREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYC 349
Query: 445 RAGYLAEAEEVISSMPMEPNAAVWEALLGA 474
+ V M + +W A++
Sbjct: 350 NCKQVLSGRRVFDGM-FDRKIGLWNAMIAG 378
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 116/239 (48%), Gaps = 9/239 (3%)
Query: 264 WSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVK 323
W ++ + +EA+ + +M IKP + +L A A L ++ G IH HV
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 324 RNSICVDAV-LGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAI 382
+ VD+V + LV++Y KCG +KVF+ + + +WN++I L + + A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 383 ELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGIDP-EVEHY--GCI 439
E F M E + P T V++AC++ M + GL + YG+ E+ + +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPE-GLM-MGKQVHAYGLRKGELNSFIINTL 242
Query: 440 VDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGA-CRKHGEVEFGERLGKILLE-MEP 496
V + G+ G LA ++ ++ S + W +L + C+ +E E L +++LE +EP
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/591 (39%), Positives = 346/591 (58%), Gaps = 22/591 (3%)
Query: 79 RFSNFELALKVFNSVHKPNVFVWNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPT 138
R + + AL+VF+ + N WNS+L +P R++ + ++ +P+ F+Y
Sbjct: 73 RSGDIDGALRVFHGMRAKNTITWNSLLIGI--SKDPSRMMEAH-QLFDEIPEPDTFSY-N 128
Query: 139 VFKACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSD 198
+ +C + + E Q D ++ I YA G + KAR++ + +
Sbjct: 129 IMLSCYVRNVNFEKAQ---SFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKN 185
Query: 199 VICWNALIDGYLKCGDIEGAKELFKSTKDKNTGSYNAMISGFARFGRFEEARKLFNEMN- 257
+ WNA+I GY++CGD+E A FK + ++ AMI+G+ + + E A +F +M
Sbjct: 186 EVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTV 245
Query: 258 DKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIW 317
+K+ +TW+A+I GY ++ ++ L++F M + I+P LS L C+ L AL G
Sbjct: 246 NKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQ 305
Query: 318 IHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGR 377
IH V ++++C D T+L+ MY KCG L AWK+FE MK K+V WNAMI G A HG
Sbjct: 306 IHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGN 365
Query: 378 ADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYG 437
AD A+ LF +M K+RPD ITF VL AC HAG+++ G+ M + Y ++P+ +HY
Sbjct: 366 ADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYT 425
Query: 438 CIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGERLGKILLEMEPQ 497
C+VDLLGRAG L EA ++I SMP P+AAV+ LLGACR H VE E + LL++ Q
Sbjct: 426 CMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQ 485
Query: 498 N--------------RRCDDVAKMRKLMKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQ 543
N R +DVA++RK MKE + PG S I++ +H FR+ D HP+
Sbjct: 486 NAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPE 545
Query: 544 VKEIYLMLKKIIEKLKMEGYSPNSSQVLFDIDEEEKETAPKYHSEKLAIAFGFINTDPGA 603
+ I+ LK++ +K+K+ GY P L +++EE+KE +HSEKLA+AFG I G+
Sbjct: 546 LDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGS 605
Query: 604 TIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
I+V KNLR+C DCH A K IS++ KR+IIVRD R+HHF++G CSC D+W
Sbjct: 606 QIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 139/313 (44%), Gaps = 43/313 (13%)
Query: 203 NALIDGYLKCGDIEGAKELFKSTKDKN--------------------------------T 230
N +I ++ GDI+GA +F + KN T
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDT 124
Query: 231 GSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRD 290
SYN M+S + R FE+A+ F+ M KD +W+ +I GY + G ++A E+F M
Sbjct: 125 FSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM--- 181
Query: 291 KIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMA 350
++ + + +++ G L++ H + + V TA++ Y K ++++A
Sbjct: 182 -MEKNEVSWNAMISGYIECGDLEKA----SHFFKVAPVRGVVAWTAMITGYMKAKKVELA 236
Query: 351 WKVFEDMKM-KEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAH 409
+F+DM + K + TWNAMI G + R +D ++LF M E +RP+ + L C+
Sbjct: 237 EAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSE 296
Query: 410 AGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWE 469
+ G Q + + + +V ++ + + G L +A ++ M + + W
Sbjct: 297 LSALQLGRQIHQIVSKSTLCN-DVTALTSLISMYCKCGELGDAWKLFEVMK-KKDVVAWN 354
Query: 470 ALLGACRKHGEVE 482
A++ +HG +
Sbjct: 355 AMISGYAQHGNAD 367
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/673 (34%), Positives = 372/673 (55%), Gaps = 60/673 (8%)
Query: 37 ILNTKCHTSWQHLKQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKP 96
++++ H + LKQ HA +L G ++ L+ HA+S F + A +VF+ + +P
Sbjct: 27 LIDSATHKA--QLKQIHARLLVLGLQFSGFLITKLI--HASSSFGDITFARQVFDDLPRP 82
Query: 97 NVFVWNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVH 156
+F WN+++R +N + +YS M P+ FT+P + KACS + G VH
Sbjct: 83 QIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVH 142
Query: 157 AHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILD--DGSKSDVICWNALIDGYLKCGD 214
A V + G DV V++ I +YA + AR + + + ++ W A++ Y + G+
Sbjct: 143 AQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202
Query: 215 IEGAKELFKSTKD-----------------------KNTGSYNAMI-------------- 237
A E+F + K S +A +
Sbjct: 203 PMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 262
Query: 238 --SGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPR 295
+ +A+ G+ A+ LF++M + I W+A+I GY K+GY +EA+++F+EM ++P
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
Query: 296 KFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFE 355
++ ++ACA +G+L+Q ++++V R+ D + +AL+DM+AKCG ++ A VF+
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFD 382
Query: 356 DMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDR 415
++V W+AMI G +HGRA +AI L+ M+R + P+ +TF +L AC H+GM+
Sbjct: 383 RTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVRE 442
Query: 416 GLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGAC 475
G M + I+P+ +HY C++DLLGRAG+L +A EVI MP++P VW ALL AC
Sbjct: 443 GWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC 501
Query: 476 RKHGEVEFGERLGKILLEMEPQN--------------RRCDDVAKMRKLMKERGIKTNPG 521
+KH VE GE + L ++P N R D VA++R MKE+G+ + G
Sbjct: 502 KKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVG 561
Query: 522 SSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVLFDIDEEEKET 581
S ++V G + FR GD SHP+ +EI ++ I +LK G+ N L D+++EE E
Sbjct: 562 CSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEE 621
Query: 582 APKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYH 641
HSE++AIA+G I+T G +R+ KNLR C +CH+ATKLISK+ R+I+VRD R+H
Sbjct: 622 TLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFH 681
Query: 642 HFRNGKCSCNDFW 654
HF++G CSC D+W
Sbjct: 682 HFKDGVCSCGDYW 694
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/650 (35%), Positives = 360/650 (55%), Gaps = 88/650 (13%)
Query: 29 FSQKTILDILNT--------KCHTSWQHLKQAHAVILKSGHFQD-HYVSGTLVKCHANSR 79
F++ + +D +NT KC+ S + L Q A +KS H +D +V+ + C +
Sbjct: 18 FTKHSKIDTVNTQNPILLISKCN-SLRELMQIQAYAIKS-HIEDVSFVAKLINFCTESPT 75
Query: 80 FSNFELALKVFNSVHKPNVFVWNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTV 139
S+ A +F ++ +P++ ++NS+ R P V SL+ E++ P+ +T+P++
Sbjct: 76 ESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSL 135
Query: 140 FKACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDV 199
KAC++ +A +EG Q+H +K GL +V Y C
Sbjct: 136 LKACAVAKALEEGRQLHCLSMKLGLDDNV---------YVC------------------- 167
Query: 200 ICWNALIDGYLKCGDIEGAKELFKSTKDKNTGSYNAMISGFARFGRFEEARKLFNEMNDK 259
LI+ Y +C D++ A+ +F + YNAM
Sbjct: 168 ---PTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM----------------------- 201
Query: 260 DEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIH 319
I GY + EAL +F EMQ +KP + L VL++CA LG+LD G WIH
Sbjct: 202 --------ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIH 253
Query: 320 DHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRAD 379
+ K++S C + TAL+DM+AKCG LD A +FE M+ K+ W+AMI A HG+A+
Sbjct: 254 KYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAE 313
Query: 380 DAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCI 439
++ +F +M+ E ++PD ITF +L+AC+H G ++ G + + M +GI P ++HYG +
Sbjct: 314 KSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSM 373
Query: 440 VDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGERLGKILLEME---- 495
VDLL RAG L +A E I +P+ P +W LL AC H ++ E++ + + E++
Sbjct: 374 VDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHG 433
Query: 496 ----------PQNRRCDDVAKMRKLMKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVK 545
+N++ + V +RK+MK+R PG S I+VN V+HEF +GDG
Sbjct: 434 GDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATT 493
Query: 546 EIYLMLKKIIEKLKMEGYSPNSSQVLF-DIDEEEKETAPKYHSEKLAIAFGFINTDPGAT 604
+++ L +++++LK+ GY P++S V+ +++++EKE +YHSEKLAI FG +NT PG T
Sbjct: 494 KLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTT 553
Query: 605 IRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
IRV+KNLRVC DCH+A KLIS +F R +++RD R+HHF +GKCSC DFW
Sbjct: 554 IRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/606 (35%), Positives = 339/606 (55%), Gaps = 37/606 (6%)
Query: 86 ALKVFNSVHKPNVFVWNSVLRACLEHN------------EPWRVISLYSEMVGVDSKPNK 133
A VF+ + + N WN++L A ++++ E W ++S + G K
Sbjct: 176 ARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKI 235
Query: 134 FTYPTVFKACSITE-----------ADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFG 182
F + ++ + A + + DV ++ + Y
Sbjct: 236 VEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNR 295
Query: 183 CVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKSTKDKNTGSYNAMISGFAR 242
V +AR++ D + + + WNA++ GY++ +E AKELF +N ++N MI+G+A+
Sbjct: 296 MVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQ 355
Query: 243 FGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCV 302
G+ EA+ LF++M +D ++W+A+I GY++ G+ EAL +F +M+R+ + + S
Sbjct: 356 CGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSA 415
Query: 303 LAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEV 362
L+ CA + AL+ G +H + + +G AL+ MY KCG ++ A +F++M K++
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475
Query: 363 FTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTY 422
+WN MI G + HG + A+ F M+RE ++PD T VLSAC+H G++D+G Q
Sbjct: 476 VSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYT 535
Query: 423 MQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVE 482
M Q YG+ P +HY C+VDLLGRAG L +A ++ +MP EP+AA+W LLGA R HG E
Sbjct: 536 MTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTE 595
Query: 483 FGERLGKILLEMEPQNR--------------RCDDVAKMRKLMKERGIKTNPGSSMIDVN 528
E + MEP+N R DV K+R M+++G+K PG S I++
Sbjct: 596 LAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQ 655
Query: 529 GVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVLFDIDEEEKETAPKYHSE 588
H F GD HP+ EI+ L+++ ++K GY +S VL D++EEEKE +YHSE
Sbjct: 656 NKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSE 715
Query: 589 KLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYHHFRNGKC 648
+LA+A+G + G IRVIKNLRVCEDCH+A K ++++ R II+RD R+HHF++G C
Sbjct: 716 RLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSC 775
Query: 649 SCNDFW 654
SC D+W
Sbjct: 776 SCGDYW 781
Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 175/371 (47%), Gaps = 48/371 (12%)
Query: 167 DVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKSTK 226
DV ++ + YA GCV+ AR + D + + + WNAL+ Y++ +E A LFKS +
Sbjct: 156 DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRE 215
Query: 227 DKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNE 286
+ S+N ++ GF + + EAR+ F+ MN +D ++W+ II GY + G EA ++F+E
Sbjct: 216 NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275
Query: 287 MQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHV-KRNSICVDAVLG----------- 334
+ F + +++ +++ + D + +RN + +A+L
Sbjct: 276 SPVQDV----FTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMA 331
Query: 335 ---------------TALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRAD 379
++ YA+CG++ A +F+ M ++ +W AMI G + G +
Sbjct: 332 KELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSF 391
Query: 380 DAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYG-IDPEVEHYGC 438
+A+ LF +M+RE R +R +F+ LS CA + AL +Q++G + GC
Sbjct: 392 EALRLFVQMEREGGRLNRSSFSSALSTCAD-------VVALELGKQLHGRLVKGGYETGC 444
Query: 439 IVD-----LLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGERLGKILLE 493
V + + G + EA ++ M + + W ++ +HG FGE +
Sbjct: 445 FVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHG---FGEVALRFFES 500
Query: 494 MEPQNRRCDDV 504
M+ + + DD
Sbjct: 501 MKREGLKPDDA 511
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 162/320 (50%), Gaps = 29/320 (9%)
Query: 187 ARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKSTKDKNTGSYNAMISGFARFGRF 246
AR++ D+ + D++ WN +I GY++ ++ A+ELF+ +++ S+N M+SG+A+ G
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCV 173
Query: 247 EEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAAC 306
++AR +F+ M +K++++W+A++ Y ++ +EA +F + + +C+L
Sbjct: 174 DDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGF 229
Query: 307 ASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWN 366
+ + D + D V ++ YA+ G++D A ++F++ +++VFTW
Sbjct: 230 VKKKKIVEARQFFDSMN----VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWT 285
Query: 367 AMIGGLAMHGRADDAIELFFKMQREKMRPDR--ITFACVLSACAHAGMIDRGLQALTYMQ 424
AM+ G + ++A ELF KM P+R +++ +L+ + + +
Sbjct: 286 AMVSGYIQNRMVEEARELFDKM------PERNEVSWNAMLAGYVQG-------ERMEMAK 332
Query: 425 QMYGIDP--EVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVE 482
+++ + P V + ++ + G ++EA+ + MP + + W A++ + G
Sbjct: 333 ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGHSF 391
Query: 483 FGERLGKILLEMEPQNRRCD 502
RL ++ME + R +
Sbjct: 392 EALRL---FVQMEREGGRLN 408
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 145/300 (48%), Gaps = 28/300 (9%)
Query: 197 SDVICWNALIDGYLKCGDIEGAKELFKSTKDKNTGSYNAMISGFARFGRFEEARKLFNEM 256
SD+ WN I Y++ G A +FK ++ SYN MISG+ R G FE ARKLF+EM
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 257 NDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLS--CVLAACASLGALDQ 314
++D ++W+ +I GY ++ +A E+F +I P + V S +L+ A G +D
Sbjct: 122 PERDLVSWNVMIKGYVRNRNLGKARELF------EIMPERDVCSWNTMLSGYAQNGCVDD 175
Query: 315 GIWIHDHV-KRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLA 373
+ D + ++N + +A+L Y + +++ A +F+ + + +WN ++GG
Sbjct: 176 ARSVFDRMPEKNDVSWNALLSA-----YVQNSKMEEACMLFKSRENWALVSWNCLLGGFV 230
Query: 374 MHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGIDP-- 431
+ +A + F M D +++ +++ A +G ID +Q++ P
Sbjct: 231 KKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEA-------RQLFDESPVQ 279
Query: 432 EVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGERLGKIL 491
+V + +V + + EA E+ MP E N W A+L + +E + L ++
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMP-ERNEVSWNAMLAGYVQGERMEMAKELFDVM 338
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 88/219 (40%), Gaps = 15/219 (6%)
Query: 50 KQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRACL 109
KQ H ++K G+ +V L+ + + + E A +F + ++ WN+++
Sbjct: 429 KQLHGRLVKGGYETGCFVGNALLLMYC--KCGSIEEANDLFKEMAGKDIVSWNTMIAGYS 486
Query: 110 EHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKN-GLCGDV 168
H + + M KP+ T V ACS T +G Q + ++ G+ +
Sbjct: 487 RHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNS 546
Query: 169 HVKSSGIQMYACFGCVNKARQILDDGS-KSDVICWNALIDGYLKCGDIEGAKELFKSTKD 227
+ + + G + A ++ + + D W L L + G EL ++ D
Sbjct: 547 QHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTL----LGASRVHGNTELAETAAD 602
Query: 228 K-------NTGSYNAMISGFARFGRFEEARKLFNEMNDK 259
K N+G Y + + +A GR+ + KL M DK
Sbjct: 603 KIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDK 641
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 238/660 (36%), Positives = 354/660 (53%), Gaps = 98/660 (14%)
Query: 27 SEFSQKTIL---------DILNTKCHTSWQHLKQAHAVILKSG------HFQDHYVSGTL 71
S FS+ ++L ++L T +S L+Q HA ++ G H + L
Sbjct: 2 SPFSETSVLLLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIF-YL 60
Query: 72 VKCHANSRFSNFELALKVFNSVHKP-NVFVWNSVLRACLEHNEPWRVISLYSEM-VGVDS 129
V + S A KVF+ + KP NVF+WN+++R E SLY EM V
Sbjct: 61 VSLPSPPPMS---YAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLV 117
Query: 130 KPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQ 189
+P+ TYP + KA + + G +H+ V+++G FG
Sbjct: 118 EPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSG-----------------FG------- 153
Query: 190 ILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKSTKDKNTGSYNAMISGFARFGRFEEA 249
S + N+L+ Y CGD+ A
Sbjct: 154 -------SLIYVQNSLLHLYANCGDVASA------------------------------- 175
Query: 250 RKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASL 309
K+F++M +KD + W+++I+G+ ++G +EAL ++ EM IKP F + +L+ACA +
Sbjct: 176 YKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKI 235
Query: 310 GALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMI 369
GAL G +H ++ + + + L+D+YA+CGR++ A +F++M K +W ++I
Sbjct: 236 GALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLI 295
Query: 370 GGLAMHGRADDAIELFFKMQR-EKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYG 428
GLA++G +AIELF M+ E + P ITF +L AC+H GM+ G + M++ Y
Sbjct: 296 VGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYK 355
Query: 429 IDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGERLG 488
I+P +EH+GC+VDLL RAG + +A E I SMPM+PN +W LLGAC HG+ + E
Sbjct: 356 IEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFAR 415
Query: 489 KILLEMEPQN--------------RRCDDVAKMRKLMKERGIKTNPGSSMIDVNGVIHEF 534
+L++EP + +R DV K+RK M G+K PG S+++V +HEF
Sbjct: 416 IQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEF 475
Query: 535 RTGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVLFDIDEEEKETAPKYHSEKLAIAF 594
GD SHPQ IY LK++ +L+ EGY P S V D++EEEKE A YHSEK+AIAF
Sbjct: 476 LMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAF 535
Query: 595 GFINTDPGATIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
I+T + I V+KNLRVC DCH A KL+SKV+ R+I+VRDR R+HHF+NG CSC D+W
Sbjct: 536 MLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/682 (34%), Positives = 368/682 (53%), Gaps = 58/682 (8%)
Query: 28 EFSQKTILDILNTKCHTSWQHL-KQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELA 86
E Q T + +L T L +Q H + LK G VS +L+ + R F A
Sbjct: 312 ECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLR--KFGFA 369
Query: 87 LKVFNSVHKPNVFVWNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACS-I 145
VF+++ + ++ WNSV+ ++ + L+ +++ KP+++T +V KA S +
Sbjct: 370 RTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSL 429
Query: 146 TEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNAL 205
E QVH H +K D V ++ I Y+ C+ +A +IL + D++ WNA+
Sbjct: 430 PEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA-EILFERHNFDLVAWNAM 488
Query: 206 IDGYLKCGDIEGAKELF---------------------------------------KSTK 226
+ GY + D +LF KS
Sbjct: 489 MAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGY 548
Query: 227 DKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNE 286
D + + ++ + + G A+ F+ + D++ W+ +I G ++G + A VF++
Sbjct: 549 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQ 608
Query: 287 MQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGR 346
M+ + P +F ++ + A + L AL+QG IH + + + D +GT+LVDMYAKCG
Sbjct: 609 MRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGS 668
Query: 347 LDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSA 406
+D A+ +F+ ++M + WNAM+ GLA HG + ++LF +M+ ++PD++TF VLSA
Sbjct: 669 IDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSA 728
Query: 407 CAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAA 466
C+H+G++ + + M YGI PE+EHY C+ D LGRAG + +AE +I SM ME +A+
Sbjct: 729 CSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASAS 788
Query: 467 VWEALLGACRKHGEVEFGERLGKILLEMEPQN--------------RRCDDVAKMRKLMK 512
++ LL ACR G+ E G+R+ LLE+EP + + D++ R +MK
Sbjct: 789 MYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMK 848
Query: 513 ERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVLF 572
+K +PG S I+V IH F D S+ Q + IY +K +I +K EGY P + L
Sbjct: 849 GHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLV 908
Query: 573 DIDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLISKVFKRDI 632
D++EEEKE A YHSEKLA+AFG ++T P IRVIKNLRVC DCH+A K I+KV+ R+I
Sbjct: 909 DVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREI 968
Query: 633 IVRDRVRYHHFRNGKCSCNDFW 654
++RD R+H F++G CSC D+W
Sbjct: 969 VLRDANRFHRFKDGICSCGDYW 990
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 201/473 (42%), Gaps = 33/473 (6%)
Query: 50 KQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRACL 109
K HA IL + ++ L+ + S+ + A +VF+ + ++ WNS+L A
Sbjct: 59 KCTHARILTFEENPERFLINNLISMY--SKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 110 EHNE-----PWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGL 164
+ +E + L+ + ++ T + K C + H + K GL
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGL 176
Query: 165 CGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKS 224
GD V + + +Y FG V + + + ++ DV+ WN ++ YL+ G E A +L +
Sbjct: 177 DGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSA 236
Query: 225 TKDKNTGSYNAMISGFARF-GRFEEARKLFNEMNDKDEITWSAII------DGYTKDGYY 277
+ AR G +A ++ + N D + S II Y G Y
Sbjct: 237 FHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQY 296
Query: 278 KEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTAL 337
L+ F +M ++ + +LA + +L G +H + + + + +L
Sbjct: 297 SALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSL 356
Query: 338 VDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDR 397
++MY K + A VF++M +++ +WN++I G+A +G +A+ LF ++ R ++PD+
Sbjct: 357 INMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQ 416
Query: 398 ITFACVLSACAHAGMIDRGLQALTYMQQMYGI------DPEVEHYGCIVDLLGRAGYLAE 451
T VL A A + GL +L+ ++ I D V ++D R + E
Sbjct: 417 YTMTSVLKA---ASSLPEGL-SLSKQVHVHAIKINNVSDSFVS--TALIDAYSRNRCMKE 470
Query: 452 AEEVISSMPMEPNAAVWEALL-GACRKHGEVEFGERLGKILLEMEPQNRRCDD 503
AE + + A W A++ G + H G + K+ M Q R DD
Sbjct: 471 AEILFERHNFDLVA--WNAMMAGYTQSHD----GHKTLKLFALMHKQGERSDD 517
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/658 (33%), Positives = 358/658 (54%), Gaps = 56/658 (8%)
Query: 50 KQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRACL 109
K+ H +++KSG D + L +A R N A KVF+ + + ++ WN+++
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVN--EARKVFDRMPERDLVSWNTIVAGYS 212
Query: 110 EHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCGDVH 169
++ + + M + KP+ T +V A S G ++H + +++G V+
Sbjct: 213 QNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVN 272
Query: 170 VKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLK------------------ 211
+ ++ + MYA G + ARQ+ D + +V+ WN++ID Y++
Sbjct: 273 ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG 332
Query: 212 -----------------CGDIEGAKELFKSTK----DKNTGSYNAMISGFARFGRFEEAR 250
GD+E + + K + D+N N++IS + + + A
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAA 392
Query: 251 KLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLG 310
+F ++ + ++W+A+I G+ ++G +AL F++M+ +KP F V+ A A L
Sbjct: 393 SMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELS 452
Query: 311 ALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIG 370
WIH V R+ + + + TALVDMYAKCG + +A +F+ M + V TWNAMI
Sbjct: 453 ITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMID 512
Query: 371 GLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGID 430
G HG A+ELF +MQ+ ++P+ +TF V+SAC+H+G+++ GL+ M++ Y I+
Sbjct: 513 GYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIE 572
Query: 431 PEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGERLGKI 490
++HYG +VDLLGRAG L EA + I MP++P V+ A+LGAC+ H V F E+ +
Sbjct: 573 LSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAER 632
Query: 491 LLEMEPQN--------------RRCDDVAKMRKLMKERGIKTNPGSSMIDVNGVIHEFRT 536
L E+ P + + V ++R M +G++ PG SM+++ +H F +
Sbjct: 633 LFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFS 692
Query: 537 GDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVLFDIDEEEKETAPKYHSEKLAIAFGF 596
G +HP K+IY L+K+I +K GY P+++ VL ++ + KE HSEKLAI+FG
Sbjct: 693 GSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGL 751
Query: 597 INTDPGATIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
+NT G TI V KNLRVC DCH+ATK IS V R+I+VRD R+HHF+NG CSC D+W
Sbjct: 752 LNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 134/564 (23%), Positives = 250/564 (44%), Gaps = 77/564 (13%)
Query: 24 IPTSEFSQKTILDILNTKCHTSWQHLKQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNF 83
IP + + L L +C +S + L+Q ++ K+G +Q+H+ LV R+ +
Sbjct: 31 IPANVYEHPAAL--LLERC-SSLKELRQILPLVFKNGLYQEHFFQTKLVSLFC--RYGSV 85
Query: 84 ELALKVFNSVHKPNVFVWNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKAC 143
+ A +VF + +++++L+ + ++ + + + M D +P + + + K C
Sbjct: 86 DEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVC 145
Query: 144 SITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWN 203
+ G ++H +VK+G D+ + MYA VN+AR++ D + D++ WN
Sbjct: 146 GDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWN 205
Query: 204 ALIDGYLKCGDIEGAKELFKSTKDKNTGSY-------------------------NAMIS 238
++ GY + G A E+ KS ++N AM S
Sbjct: 206 TIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS 265
Query: 239 GF--------------ARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVF 284
GF A+ G E AR+LF+ M +++ ++W+++ID Y ++ KEA+ +F
Sbjct: 266 GFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIF 325
Query: 285 NEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKC 344
+M + +KP + L ACA LG L++G +IH + + + +L+ MY KC
Sbjct: 326 QKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKC 385
Query: 345 GRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVL 404
+D A +F ++ + + +WNAMI G A +GR DA+ F +M+ ++PD T+ V+
Sbjct: 386 KEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVI 445
Query: 405 SACAHAGM---------------IDRGLQALTYMQQMYG---------------IDPEVE 434
+A A + +D+ + T + MY + V
Sbjct: 446 TAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVT 505
Query: 435 HYGCIVDLLGRAGYLAEAEEVISSM---PMEPNAAVWEALLGACRKHGEVEFGERLGKIL 491
+ ++D G G+ A E+ M ++PN + +++ AC G VE G + ++
Sbjct: 506 TWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMM 565
Query: 492 LEMEPQNRRCDDVAKMRKLMKERG 515
E D M L+ G
Sbjct: 566 KENYSIELSMDHYGAMVDLLGRAG 589
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/659 (34%), Positives = 357/659 (54%), Gaps = 65/659 (9%)
Query: 53 HAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRACLEHN 112
H + LK G D YV+ +L+ H SR+ A +F+ + ++ WN+++ +
Sbjct: 173 HCLALKFGFMWDVYVAASLI--HLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSG 230
Query: 113 EPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCGDVHVKS 172
++L + + +DS T ++ AC+ GV +H++ +K+GL ++ V +
Sbjct: 231 NAKEALTLSNGLRAMDS----VTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSN 286
Query: 173 SGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGY----------------------- 209
I +YA FG + +++ D D+I WN++I Y
Sbjct: 287 KLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP 346
Query: 210 ------------LKCGDIEGAKELFKST-------KDKNTGSYNAMISGFARFGRFEEAR 250
+ GDI + + T +D G NA++ +A+ G + AR
Sbjct: 347 DCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIG--NAVVVMYAKLGLVDSAR 404
Query: 251 KLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRD-KIKPRKFVLSCVLAACASL 309
+FN + + D I+W+ II GY ++G+ EA+E++N M+ + +I + VL AC+
Sbjct: 405 AVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQA 464
Query: 310 GALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMI 369
GAL QG+ +H + +N + +D + T+L DMY KCGRL+ A +F + WN +I
Sbjct: 465 GALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLI 524
Query: 370 GGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGI 429
HG + A+ LF +M E ++PD ITF +LSAC+H+G++D G MQ YGI
Sbjct: 525 ACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGI 584
Query: 430 DPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGERLGK 489
P ++HYGC+VD+ GRAG L A + I SM ++P+A++W ALL ACR HG V+ G+ +
Sbjct: 585 TPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASE 644
Query: 490 ILLEMEPQN--------------RRCDDVAKMRKLMKERGIKTNPGSSMIDVNGVIHEFR 535
L E+EP++ + + V ++R + +G++ PG S ++V+ + F
Sbjct: 645 HLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFY 704
Query: 536 TGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVLFDIDEEEKETAPKYHSEKLAIAFG 595
TG+ +HP +E+Y L + KLKM GY P+ VL D++++EKE HSE+LAIAF
Sbjct: 705 TGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFA 764
Query: 596 FINTDPGATIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
I T TIR+ KNLRVC DCHS TK ISK+ +R+IIVRD R+HHF+NG CSC D+W
Sbjct: 765 LIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/500 (27%), Positives = 231/500 (46%), Gaps = 48/500 (9%)
Query: 44 TSWQHLKQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNS 103
T+ Q K HA ++ S Q+ +S LV + N LA F+ + +V+ WN
Sbjct: 65 TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYC--YLGNVALARHTFDHIQNRDVYAWNL 122
Query: 104 VLRACLEHNEPWRVISLYSE-MVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKN 162
++ VI +S M+ P+ T+P+V KAC +G ++H +K
Sbjct: 123 MISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV---IDGNKIHCLALKF 179
Query: 163 GLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELF 222
G DV+V +S I +Y+ + V AR + D+ D+ WNA+I GY + G+ + A L
Sbjct: 180 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLS 239
Query: 223 KSTK------------------DKNTG----SY-------------NAMISGFARFGRFE 247
+ D N G SY N +I +A FGR
Sbjct: 240 NGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 248 EARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACA 307
+ +K+F+ M +D I+W++II Y + A+ +F EM+ +I+P L + + +
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 308 SLGALDQGIWIHDHVKRNSICV-DAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWN 366
LG + + R + D +G A+V MYAK G +D A VF + +V +WN
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWN 419
Query: 367 AMIGGLAMHGRADDAIELFFKMQRE-KMRPDRITFACVLSACAHAGMIDRGLQALTYMQQ 425
+I G A +G A +AIE++ M+ E ++ ++ T+ VL AC+ AG + +G++ + +
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK 479
Query: 426 MYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGE 485
G+ +V + D+ G+ G L +A + +P N+ W L+ AC HG GE
Sbjct: 480 -NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLI-AC--HGFHGHGE 534
Query: 486 RLGKILLEMEPQNRRCDDVA 505
+ + EM + + D +
Sbjct: 535 KAVMLFKEMLDEGVKPDHIT 554
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 184/427 (43%), Gaps = 80/427 (18%)
Query: 138 TVFKACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKS 197
T+F+ C+ ++ K +HA +V + +V + + + +Y G V AR D
Sbjct: 59 TLFRYCTNLQSAK---CLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 198 DVICWNALIDGYLKCGDIEGAKELF-----------------------KSTKDKNTGSYN 234
DV WN +I GY + G+ F ++ D N
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCL 175
Query: 235 AMISGF--------------ARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEA 280
A+ GF +R+ AR LF+EM +D +W+A+I GY + G KEA
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 235
Query: 281 LEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDM 340
L + N ++ + +L+AC G ++G+ IH + ++ + + + L+D+
Sbjct: 236 LTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 291
Query: 341 YAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITF 400
YA+ GRL KVF+ M ++++ +WN++I ++ + AI LF +M+ +++PD +T
Sbjct: 292 YAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTL 351
Query: 401 ACVLSACAHAGMID--RGLQALTY-----------------MQQMYGI------------ 429
+ S + G I R +Q T M G+
Sbjct: 352 ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Query: 430 DPEVEHYGCIVDLLGRAGYLAEAEEVISSMPME----PNAAVWEALLGACRKHGEVEFGE 485
+ +V + I+ + G+ +EA E+ + M E N W ++L AC + G + G
Sbjct: 412 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM 471
Query: 486 RL-GKIL 491
+L G++L
Sbjct: 472 KLHGRLL 478
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/595 (36%), Positives = 338/595 (56%), Gaps = 51/595 (8%)
Query: 79 RFSNFELALKVFNSVHKPNVFVWNSVLRACLEHNEPWRVISLYSEMVGVDS--KPNKFTY 136
+ +LA+ F + + ++ WNS++ + R + ++S+M+ DS P++FT
Sbjct: 224 QVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR-DSLLSPDRFTL 282
Query: 137 PTVFKACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSK 196
+V AC+ E G Q+H+H+V G D+ SGI +
Sbjct: 283 ASVLSACANLEKLCIGKQIHSHIVTTGF--DI----SGIVL------------------- 317
Query: 197 SDVICWNALIDGYLKCGDIEGAKELF--KSTKDKNTGSYNAMISGFARFGRFEEARKLFN 254
NALI Y +CG +E A+ L + TKD + A++ G+ + G +A+ +F
Sbjct: 318 ------NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFV 371
Query: 255 EMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQ 314
+ D+D + W+A+I GY + G Y EA+ +F M +P + L+ +L+ +SL +L
Sbjct: 372 SLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSH 431
Query: 315 GIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKM-KEVFTWNAMIGGLA 373
G IH ++ + AL+ MYAK G + A + F+ ++ ++ +W +MI LA
Sbjct: 432 GKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALA 491
Query: 374 MHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGIDPEV 433
HG A++A+ELF M E +RPD IT+ V SAC HAG++++G Q M+ + I P +
Sbjct: 492 QHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTL 551
Query: 434 EHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGERLGKILLE 493
HY C+VDL GRAG L EA+E I MP+EP+ W +LL ACR H ++ G+ + LL
Sbjct: 552 SHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLL 611
Query: 494 MEPQNR--------------RCDDVAKMRKLMKERGIKTNPGSSMIDVNGVIHEFRTGDG 539
+EP+N + ++ AK+RK MK+ +K G S I+V +H F DG
Sbjct: 612 LEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDG 671
Query: 540 SHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVLFDIDEEEKETAPKYHSEKLAIAFGFINT 599
+HP+ EIY+ +KKI +++K GY P+++ VL D++EE KE ++HSEKLAIAFG I+T
Sbjct: 672 THPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLIST 731
Query: 600 DPGATIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
T+R++KNLRVC DCH+A K ISK+ R+IIVRD R+HHF++G CSC D+W
Sbjct: 732 PDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/508 (23%), Positives = 210/508 (41%), Gaps = 105/508 (20%)
Query: 53 HAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRACLEHN 112
H ++KSG Y+ L+ ++ + ++ A K+F+ + F WN+VL A +
Sbjct: 37 HCRVIKSGLMFSVYLMNNLMNVYSKTGYALH--ARKLFDEMPLRTAFSWNTVLSAYSKRG 94
Query: 113 E-----------------PW--------------RVISLYSEMVGVDSKPNKFTYPTVFK 141
+ W + I + +MV +P +FT V
Sbjct: 95 DMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLA 154
Query: 142 ACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVIC 201
+ + T + G +VH+ +VK GL G+V V +S + MYA G A+ + D D+
Sbjct: 155 SVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISS 214
Query: 202 WNALIDGYLKCGDIEGAKELFKSTKDKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDE 261
WNA+I +++ G ++ A F+ +++ ++N+MISGF
Sbjct: 215 WNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGF--------------------- 253
Query: 262 ITWSAIIDGYTKDGYYKEALEVFNEMQRDK-IKPRKFVLSCVLAACASLGALDQGIWIHD 320
+ GY AL++F++M RD + P +F L+ VL+ACA+L L G IH
Sbjct: 254 ----------NQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 321 HVKRNSICVDAVLGTALVDMYAKCGRLDMAWK---------------------------- 352
H+ + ++ AL+ MY++CG ++ A +
Sbjct: 304 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 363
Query: 353 -----VFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSAC 407
+F +K ++V W AMI G HG +AI LF M RP+ T A +LS
Sbjct: 364 NQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVA 423
Query: 408 AHAGMIDRGLQ---ALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPN 464
+ + G Q + ++Y + ++ + +AG + A + E +
Sbjct: 424 SSLASLSHGKQIHGSAVKSGEIYSVSVS----NALITMYAKAGNITSASRAFDLIRCERD 479
Query: 465 AAVWEALLGACRKHGEVEFGERLGKILL 492
W +++ A +HG E L + +L
Sbjct: 480 TVSWTSMIIALAQHGHAEEALELFETML 507
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/612 (35%), Positives = 350/612 (57%), Gaps = 47/612 (7%)
Query: 86 ALKVFNSVHKPNVFVWNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVF----- 140
A KVF+ + + NV W ++++ + + + SL+ +M + NK ++ +
Sbjct: 98 ARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM----PEKNKVSWTVMLIGFLQ 153
Query: 141 -----KACSITEADKEGVQVHAHVVKNGLCGDVHVK-----------------SSGIQMY 178
AC + E + + + +GLC + V ++ + Y
Sbjct: 154 DGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGY 213
Query: 179 ACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKSTKDKNTGSYNAMIS 238
V+ AR+I D + + W +++ GY++ G IE A+ELF+ K + NAMIS
Sbjct: 214 GQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMIS 273
Query: 239 GFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFV 298
G + G +AR++F+ M ++++ +W +I + ++G+ EAL++F MQ+ ++P
Sbjct: 274 GLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPT 333
Query: 299 LSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMK 358
L +L+ CASL +L G +H + R VD + + L+ MY KCG L + +F+
Sbjct: 334 LISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP 393
Query: 359 MKEVFTWNAMIGGLAMHGRADDAIELFFKMQRE-KMRPDRITFACVLSACAHAGMIDRGL 417
K++ WN++I G A HG ++A+++F +M +P+ +TF LSAC++AGM++ GL
Sbjct: 394 SKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGL 453
Query: 418 QALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRK 477
+ M+ ++G+ P HY C+VD+LGRAG EA E+I SM +EP+AAVW +LLGACR
Sbjct: 454 KIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRT 513
Query: 478 HGEVEFGERLGKILLEMEPQNR--------------RCDDVAKMRKLMKERGIKTNPGSS 523
H +++ E K L+E+EP+N R DVA++RKLMK R ++ +PG S
Sbjct: 514 HSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCS 573
Query: 524 MIDVNGVIHEF-RTGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVLFDIDEEEKETA 582
+V +H F R G SHP+ + I +L ++ L+ GY+P+ S L D+DEEEK +
Sbjct: 574 WTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNS 633
Query: 583 PKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYHH 642
KYHSE+LA+A+ + G IRV+KNLRVC DCH+A K+ISKV +R+II+RD R+HH
Sbjct: 634 LKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHH 693
Query: 643 FRNGKCSCNDFW 654
FRNG+CSC D+W
Sbjct: 694 FRNGECSCKDYW 705
Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 148/301 (49%), Gaps = 22/301 (7%)
Query: 181 FGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKSTKDKNTGSYNAMISGF 240
G +++AR++ D + WN+++ GY A++LF D+N S+N ++SG+
Sbjct: 30 IGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGY 89
Query: 241 ARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLS 300
+ G +EARK+F+ M +++ ++W+A++ GY +G A +F +M + K +
Sbjct: 90 MKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP----EKNKVSWT 145
Query: 301 CVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMK 360
+L G +D +++ + D + T+++ K GR+D A ++F++M +
Sbjct: 146 VMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDEMSER 201
Query: 361 EVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQAL 420
V TW M+ G + R DDA ++F M + +++ +L G I+
Sbjct: 202 SVITWTTMVTGYGQNNRVDDARKIFDVMPEKT----EVSWTSMLMGYVQNGRIEDA---- 253
Query: 421 TYMQQMYGIDPEVEHYGC--IVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKH 478
++++ + P C ++ LG+ G +A+A V SM E N A W+ ++ ++
Sbjct: 254 ---EELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMK-ERNDASWQTVIKIHERN 309
Query: 479 G 479
G
Sbjct: 310 G 310
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 149/306 (48%), Gaps = 24/306 (7%)
Query: 187 ARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKSTKDKNTGSYNAMISGFARFGRF 246
AR++ D+ ++I WN L+ GY+K G+I+ A+++F ++N S+ A++ G+ G+
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKV 126
Query: 247 EEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAAC 306
+ A LF +M +K++++W+ ++ G+ +DG +A +++ EM DK + ++
Sbjct: 127 DVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY-EMIPDK---DNIARTSMIHGL 182
Query: 307 ASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWN 366
G +D+ I D + S+ + T +V Y + R+D A K+F+ M K +W
Sbjct: 183 CKEGRVDEAREIFDEMSERSV----ITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWT 238
Query: 367 AMIGGLAMHGRADDAIELFFKMQREKMRPDRITFAC--VLSACAHAGMIDRGLQALTYMQ 424
+M+ G +GR +DA ELF M P + AC ++S G I + + M+
Sbjct: 239 SMLMGYVQNGRIEDAEELFEVM------PVKPVIACNAMISGLGQKGEIAKARRVFDSMK 292
Query: 425 QMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMP---MEPNAAVWEALLGACRKHGEV 481
+ + ++ + R G+ EA ++ M + P ++L C +
Sbjct: 293 ERNDAS-----WQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASL 347
Query: 482 EFGERL 487
G+++
Sbjct: 348 HHGKQV 353
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 106/240 (44%), Gaps = 21/240 (8%)
Query: 33 TILDILNT-KCHTSWQHLKQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFN 91
T++ IL+ S H KQ HA +++ D YV+ L+ + + + +F+
Sbjct: 333 TLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYI--KCGELVKSKLIFD 390
Query: 92 SVHKPNVFVWNSVLRACLEHNEPWRVISLYSEM-VGVDSKPNKFTYPTVFKACSITEADK 150
++ +WNS++ H + ++ EM + +KPN+ T+ ACS +
Sbjct: 391 RFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVE 450
Query: 151 EGVQVHAHVVKNGLCGDVHVKSSGIQMYACF-------GCVNKARQILDDGS-KSDVICW 202
EG++++ + + G + + YAC G N+A +++D + + D W
Sbjct: 451 EGLKIYESM--ESVFGVKPITAH----YACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVW 504
Query: 203 NALIDGYLKCGDIEGAKELFK---STKDKNTGSYNAMISGFARFGRFEEARKLFNEMNDK 259
+L+ ++ A+ K + +N+G+Y + + +A GR+ + +L M +
Sbjct: 505 GSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTR 564
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/695 (31%), Positives = 362/695 (52%), Gaps = 94/695 (13%)
Query: 50 KQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRACL 109
KQ HA +++ H + ++ + N AL +F ++ P V W SV+R
Sbjct: 25 KQLHAQFIRTQSLS-HTSASIVISIYTNL--KLLHEALLLFKTLKSPPVLAWKSVIRCFT 81
Query: 110 EHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCGDVH 169
+ + + ++ + EM P+ +P+V K+C++ + G VH +V+ G+ D++
Sbjct: 82 DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141
Query: 170 VKSSGIQMYA----------------------------------C---FGCVNKARQILD 192
++ + MYA C FG ++ R++ +
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFG-IDSVRRVFE 200
Query: 193 DGSKSDVICWNALIDGYLKCGDIEGAKELFK--STKDKNTGSY----------------- 233
+ DV+ +N +I GY + G E A + + T D S+
Sbjct: 201 VMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIK 260
Query: 234 --------------------NAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTK 273
++++ +A+ R E++ ++F+ + +D I+W++++ GY +
Sbjct: 261 GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQ 320
Query: 274 DGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVL 333
+G Y EAL +F +M K+KP S V+ ACA L L G +H +V R + +
Sbjct: 321 NGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFI 380
Query: 334 GTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKM 393
+ALVDMY+KCG + A K+F+ M + + +W A+I G A+HG +A+ LF +M+R+ +
Sbjct: 381 ASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 440
Query: 394 RPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAE 453
+P+++ F VL+AC+H G++D M ++YG++ E+EHY + DLLGRAG L EA
Sbjct: 441 KPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAY 500
Query: 454 EVISSMPMEPNAAVWEALLGACRKHGEVEFGERLGK--------------ILLEMEPQNR 499
IS M +EP +VW LL +C H +E E++ + ++ M N
Sbjct: 501 NFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNG 560
Query: 500 RCDDVAKMRKLMKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLK 559
R ++AK+R M+++G++ P S I++ H F +GD SHP + +I LK ++E+++
Sbjct: 561 RWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQME 620
Query: 560 MEGYSPNSSQVLFDIDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHS 619
EGY ++S VL D+DEE K HSE+LA+AFG INT+PG TIRV KN+R+C DCH
Sbjct: 621 KEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHV 680
Query: 620 ATKLISKVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
A K ISK+ +R+IIVRD R+HHF G CSC D+W
Sbjct: 681 AIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 168/355 (47%), Gaps = 27/355 (7%)
Query: 18 EISATNIPTSEFSQKTILDILNTKCHTSWQHLKQAHAVILKSGHFQDHYVSGTLVKCHAN 77
E+ T++ F+ ++L I + + K+ H +++ G D Y+ +LV +A
Sbjct: 232 EMGTTDLKPDSFTLSSVLPIFSE--YVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK 289
Query: 78 SRFSNFELALKVFNSVHKPNVFVWNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYP 137
S + E + +VF+ ++ + WNS++ +++ + L+ +MV KP +
Sbjct: 290 S--ARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFS 347
Query: 138 TVFKACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKS 197
+V AC+ G Q+H +V++ G ++ + S+ + MY+ G + AR+I D +
Sbjct: 348 SVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL 407
Query: 198 DVICWNALIDGYLKCGDIEGAKELFKSTKDK----NTGSYNAMISGFARFGRFEEARKLF 253
D + W A+I G+ G A LF+ K + N ++ A+++ + G +EA F
Sbjct: 408 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYF 467
Query: 254 NEMN-----DKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACAS 308
N M +++ ++A+ D + G +EA +N + + ++P V S +L++C
Sbjct: 468 NSMTKVYGLNQELEHYAAVADLLGRAGKLEEA---YNFISKMCVEPTGSVWSTLLSSC-- 522
Query: 309 LGALDQGIWIHDHVKRNSICVDAVLGTALV---DMYAKCGRLDMAWKVFEDMKMK 360
++ + + + + V VD+ A V +MYA GR WK ++++
Sbjct: 523 --SVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGR----WKEMAKLRLR 571
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 128/309 (41%), Gaps = 41/309 (13%)
Query: 218 AKEL---FKSTKDKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKD 274
AK+L F T+ + S + +IS + EA LF + + W ++I +T
Sbjct: 24 AKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQ 83
Query: 275 GYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLG 334
+ +AL F EM+ P V VL +C + L G +H + R + D G
Sbjct: 84 SLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTG 143
Query: 335 TALVDMYAK---------CGR---------------------------LDMAWKVFEDMK 358
AL++MYAK G +D +VFE M
Sbjct: 144 NALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMP 203
Query: 359 MKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQ 418
K+V ++N +I G A G +DA+ + +M ++PD T + VL + + +G +
Sbjct: 204 RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKE 263
Query: 419 ALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKH 478
Y+ + GID +V +VD+ ++ + ++E V S + + W +L+ ++
Sbjct: 264 IHGYVIRK-GIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS-WNSLVAGYVQN 321
Query: 479 GEVEFGERL 487
G RL
Sbjct: 322 GRYNEALRL 330
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 43 HTSWQHL-KQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVW 101
H + HL KQ H +L+ G + +++ LV + S+ N + A K+F+ ++ + W
Sbjct: 355 HLATLHLGKQLHGYVLRGGFGSNIFIASALVDMY--SKCGNIKAARKIFDRMNVLDEVSW 412
Query: 102 NSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACS-ITEADKEGVQVHAHVV 160
+++ H +SL+ EM KPN+ + V ACS + D+ ++
Sbjct: 413 TAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTK 472
Query: 161 KNGLCGDVHVKSSGIQMYACFGCVNKARQILD------DGSKSDVICWNALIDGYLKCGD 214
GL ++ ++ + G + +A + GS W+ L+ +
Sbjct: 473 VYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGS-----VWSTLLSSCSVHKN 527
Query: 215 IEGAKELFK---STKDKNTGSYNAMISGFARFGRFEEARKLFNEMNDK 259
+E A+++ + + +N G+Y M + +A GR++E KL M K
Sbjct: 528 LELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKK 575
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 405 bits (1040), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/659 (33%), Positives = 361/659 (54%), Gaps = 56/659 (8%)
Query: 50 KQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRACL 109
+Q H ILKSG + + V +LV + ++ + A KVF+ + + +V WNS++ +
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQ--RVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 110 EHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCGDVH 169
+ + +S++ +M+ + + T +VF C+ + G VH+ VK +
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 170 VKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKSTKDKN 229
++ + MY+ G ++ A+ + + S V+ + ++I GY + G A +LF+ +++
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 230 TGS---------------------------------------YNAMISGFARFGRFEEAR 250
NA++ +A+ G +EA
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 251 KLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDK-IKPRKFVLSCVLAACASL 309
+F+EM KD I+W+ II GY+K+ Y EAL +FN + +K P + ++CVL ACASL
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 310 GALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMI 369
A D+G IH ++ RN D + +LVDMYAKCG L +A +F+D+ K++ +W MI
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 572
Query: 370 GGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGI 429
G MHG +AI LF +M++ + D I+F +L AC+H+G++D G + M+ I
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 632
Query: 430 DPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGERLGK 489
+P VEHY CIVD+L R G L +A I +MP+ P+A +W ALL CR H +V+ E++ +
Sbjct: 633 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 692
Query: 490 ILLEMEPQN--------------RRCDDVAKMRKLMKERGIKTNPGSSMIDVNGVIHEFR 535
+ E+EP+N + + V ++RK + +RG++ NPG S I++ G ++ F
Sbjct: 693 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFV 752
Query: 536 TGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVLFDIDEEEKETAPKYHSEKLAIAFG 595
GD S+P+ + I L+K+ ++ EGYSP + L D +E EKE A HSEKLA+A G
Sbjct: 753 AGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALG 812
Query: 596 FINTDPGATIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
I++ G IRV KNLRVC DCH K +SK+ +R+I++RD R+H F++G CSC FW
Sbjct: 813 IISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 126/499 (25%), Positives = 236/499 (47%), Gaps = 56/499 (11%)
Query: 57 LKSGHFQDHYVSGT--LVKCHANSRFS-------NFELALKVFNSVHKPNVFVWNSVLRA 107
LK G D+++ G ++ + S+ S + + A +VF+ V WN ++
Sbjct: 110 LKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNE 169
Query: 108 CLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCGD 167
+ + I L+ +M+ + + +T+ V K+ S + G Q+H ++K+G
Sbjct: 170 LAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGER 229
Query: 168 VHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCG-------------- 213
V +S + Y V+ AR++ D+ ++ DVI WN++I+GY+ G
Sbjct: 230 NSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLV 289
Query: 214 -----DIEGAKELFKSTKDKNTGSY--------------------NAMISGFARFGRFEE 248
D+ +F D S N ++ +++ G +
Sbjct: 290 SGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDS 349
Query: 249 ARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACAS 308
A+ +F EM+D+ ++++++I GY ++G EA+++F EM+ + I P + ++ VL CA
Sbjct: 350 AKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCAR 409
Query: 309 LGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAM 368
LD+G +H+ +K N + D + AL+DMYAKCG + A VF +M++K++ +WN +
Sbjct: 410 YRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTI 469
Query: 369 IGGLAMHGRADDAIELF-FKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTY-MQQM 426
IGG + + A++A+ LF ++ ++ PD T ACVL ACA D+G + Y M+
Sbjct: 470 IGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNG 529
Query: 427 YGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGER 486
Y D V + +VD+ + G L A + + + W ++ HG FG+
Sbjct: 530 YFSDRHVAN--SLVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMHG---FGKE 583
Query: 487 LGKILLEMEPQNRRCDDVA 505
+ +M D+++
Sbjct: 584 AIALFNQMRQAGIEADEIS 602
Score = 149 bits (375), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 187/399 (46%), Gaps = 43/399 (10%)
Query: 135 TYPTVFKACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDG 194
T +V + C+ +++ K+G +V + NG D ++ S MY G + +A ++ D+
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 195 SKSDVICWNALIDGYLKCGDIEGAKELFK--------------STKDKNTGSY------- 233
+ WN L++ K GD G+ LFK S K+ S
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 234 ------------------NAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDG 275
N++++ + + R + ARK+F+EM ++D I+W++II+GY +G
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 276 YYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGT 335
++ L VF +M I+ + V A CA + G +H + +
Sbjct: 276 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335
Query: 336 ALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRP 395
L+DMY+KCG LD A VF +M + V ++ +MI G A G A +A++LF +M+ E + P
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 396 DRITFACVLSACAHAGMIDRGLQALTYMQQM-YGIDPEVEHYGCIVDLLGRAGYLAEAEE 454
D T VL+ CA ++D G + ++++ G D V + ++D+ + G + EAE
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEAEL 453
Query: 455 VISSMPMEPNAAVWEALLGACRKHGEVEFGERLGKILLE 493
V S M ++ + W ++G K+ L +LLE
Sbjct: 454 VFSEMRVK-DIISWNTIIGGYSKNCYANEALSLFNLLLE 491
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 172/377 (45%), Gaps = 27/377 (7%)
Query: 227 DKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNE 286
D N GS +++ + G +EA ++F+E+ + + W+ +++ K G + ++ +F +
Sbjct: 128 DSNLGSKLSLM--YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKK 185
Query: 287 MQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGR 346
M ++ + SCV + +SL ++ G +H + ++ +G +LV Y K R
Sbjct: 186 MMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR 245
Query: 347 LDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSA 406
+D A KVF++M ++V +WN++I G +G A+ + +F +M + D T V +
Sbjct: 246 VDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 305
Query: 407 CAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAA 466
CA + +I G +A+ + E ++D+ + G L A+ V M + +
Sbjct: 306 CADSRLISLG-RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS-DRSVV 363
Query: 467 VWEALLGACRKHGEVEFGERLGKILLEMEPQNRRCD--------DVAKMRKLMKE----- 513
+ +++ + G GE + K+ EME + D + +L+ E
Sbjct: 364 SYTSMIAGYAREGLA--GEAV-KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 514 RGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIY--LMLKKIIE-KLKMEGYS----PN 566
IK N I V+ + + GS + + ++ + +K II + GYS N
Sbjct: 421 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYAN 480
Query: 567 SSQVLFDIDEEEKETAP 583
+ LF++ EEK +P
Sbjct: 481 EALSLFNLLLEEKRFSP 497
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Query: 271 YTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVD 330
+ + G + A+++ + I PR L VL CA +L G + + ++ N +D
Sbjct: 71 FCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVID 128
Query: 331 AVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQR 390
+ LG+ L MY CG L A +VF+++K+++ WN ++ LA G +I LF KM
Sbjct: 129 SNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS 188
Query: 391 EKMRPDRITFACV 403
+ D TF+CV
Sbjct: 189 SGVEMDSYTFSCV 201
>sp|Q9LXE8|PP386_ARATH Pentatricopeptide repeat-containing protein At5g15340,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H91 PE=2
SV=1
Length = 623
Score = 402 bits (1033), Expect = e-111, Method: Compositional matrix adjust.
Identities = 230/634 (36%), Positives = 350/634 (55%), Gaps = 65/634 (10%)
Query: 50 KQAHAVILKSG--HFQDHYVSGTLVKCHANSRFSNFELALKVFNSV---HKPNVFVWNSV 104
K+ HAV+ SG Y+S L + +A+S A K+F+ + K NV W ++
Sbjct: 26 KELHAVLTTSGLKKAPRSYLSNALFQFYASS--GEMVTAQKLFDEIPLSEKDNVD-WTTL 82
Query: 105 LRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGL 164
L + + + L+ EM + + + +F C+ E Q H VK G+
Sbjct: 83 LSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGV 142
Query: 165 CGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKS 224
V V NAL+D Y KCG + K +F+
Sbjct: 143 LTSVKV-------------------------------CNALMDMYGKCGLVSEVKRIFEE 171
Query: 225 TKDKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVF 284
++K+ S+ ++ ++ E R++F+EM +++ + W+ ++ GY G+ +E LE+
Sbjct: 172 LEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELL 231
Query: 285 NEMQRDKIKPRKFVLSC-VLAACASLGALDQGIWIHDHVKRNSICV-------DAVLGTA 336
EM FV C +L+ACA G L G W+H + + + + D ++GTA
Sbjct: 232 AEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTA 291
Query: 337 LVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPD 396
LVDMYAKCG +D + VF M+ + V TWNA+ GLAMHG+ I++F +M RE ++PD
Sbjct: 292 LVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPD 350
Query: 397 RITFACVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVI 456
+TF VLSAC+H+G++D G + ++ YG++P+V+HY C+VDLLGRAG + EAE ++
Sbjct: 351 DLTFTAVLSACSHSGIVDEGWRCFHSLR-FYGLEPKVDHYACMVDLLGRAGLIEEAEILM 409
Query: 457 SSMPMEPNAAVWEALLGACRKHGEVEFGERLGKILLEMEPQNR--------------RCD 502
MP+ PN V +LLG+C HG+VE ER+ + L++M P N R D
Sbjct: 410 REMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSD 469
Query: 503 DVAKMRKLMKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEG 562
+R +++RGI+ PG S I VN +H F +GD SHP+ KEIYL L ++IE+++ G
Sbjct: 470 IADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAG 529
Query: 563 YSPNSSQVLF--DIDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSA 620
Y P+ S ++ + D EEKE A HSEKLA+ FG + T P + V KNLR+C DCHSA
Sbjct: 530 YVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSA 589
Query: 621 TKLISKVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
K++SKV+ R+II+RDR R+H F+ G CSC+D+W
Sbjct: 590 MKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/610 (36%), Positives = 322/610 (52%), Gaps = 63/610 (10%)
Query: 101 WNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVV 160
WN LR + ISLY M+ S P+ F++P + K+C+ G Q+H HV
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 161 KNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSD--VICWNALIDGYLKCGDIEGA 218
K G + V ++ I MY G V AR++ ++ +S +C+NALI GY + A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 219 KELFKSTK---------------------------------------DKNTGSYNAMISG 239
+F+ K D N+ I+
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 240 FARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVL 299
+ + G E R+LF+EM K ITW+A+I GY+++G + LE++ +M+ + P F L
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 300 SCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKM 359
VL++CA LGA G + V+ N + + A + MYA+CG L A VF+ M +
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 360 KEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQA 419
K + +W AMIG MHG + + LF M + +RPD F VLSAC+H+G+ D+GL+
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380
Query: 420 LTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHG 479
M++ Y ++P EHY C+VDLLGRAG L EA E I SMP+EP+ AVW ALLGAC+ H
Sbjct: 381 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK 440
Query: 480 EVEFGERLGKILLEMEPQN--------------RRCDDVAKMRKLMKERGIKTNPGSSMI 525
V+ E ++E EP N + + + ++R +M+ER + PG S +
Sbjct: 441 NVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYV 500
Query: 526 DVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVLFDIDE-EEKETAPK 584
+ G +H F GD SH Q +E++ ML + +E ME + N D D EE + +
Sbjct: 501 EHKGRVHLFLAGDRSHEQTEEVHRMLDE-LETSVME-LAGN-----MDCDRGEEVSSTTR 553
Query: 585 YHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYHHFR 644
HSE+LAIAFG +N+ PG I VIKNLRVCEDCH K +SK+ R +VRD R+H+F+
Sbjct: 554 EHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFK 613
Query: 645 NGKCSCNDFW 654
+G CSC D+W
Sbjct: 614 DGVCSCKDYW 623
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 12/234 (5%)
Query: 82 NFELALKVFNSVHKPNVFVWNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFK 141
+ E ++F+ + + WN+V+ ++ + V+ LY +M P+ FT +V
Sbjct: 206 SVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLS 265
Query: 142 ACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVIC 201
+C+ A K G +V V NG +V V ++ I MYA G + KAR + D ++
Sbjct: 266 SCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVS 325
Query: 202 WNALIDGYLKCGDIEGAKELF----KSTKDKNTGSYNAMISGFARFGRFEEARKLFNEMN 257
W A+I Y G E LF K + + ++S + G ++ +LF M
Sbjct: 326 WTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMK 385
Query: 258 DKDEIT-----WSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAAC 306
+ ++ +S ++D + G EA+E M ++P V +L AC
Sbjct: 386 REYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESM---PVEPDGAVWGALLGAC 436
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/624 (35%), Positives = 345/624 (55%), Gaps = 56/624 (8%)
Query: 50 KQAHAVILKSG-HFQDHYVSGTL---VKCHANSRFSNFELALKVFNSVHKPNVFVWNSVL 105
++ +A I SG D VS + +KC+A ++A ++F+ N+ + N++
Sbjct: 256 EKVYAFIRNSGIEVNDLMVSALVDMYMKCNA------IDVAKRLFDEYGASNLDLCNAMA 309
Query: 106 RACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLC 165
+ + +++ M+ +P++ + + +CS G H +V++NG
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGF- 368
Query: 166 GDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKST 225
D IC NALID Y+KC + A +F
Sbjct: 369 -----------------------------ESWDNIC-NALIDMYMKCHRQDTAFRIFDRM 398
Query: 226 KDKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFN 285
+K ++N++++G+ G + A + F M +K+ ++W+ II G + ++EA+EVF
Sbjct: 399 SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFC 458
Query: 286 EMQ-RDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKC 344
MQ ++ + + + +AC LGALD WI+ ++++N I +D LGT LVDM+++C
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC 518
Query: 345 GRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVL 404
G + A +F + ++V W A IG +AM G A+ AIELF M + ++PD + F L
Sbjct: 519 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGAL 578
Query: 405 SACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPN 464
+AC+H G++ +G + M +++G+ PE HYGC+VDLLGRAG L EA ++I MPMEPN
Sbjct: 579 TACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPN 638
Query: 465 AAVWEALLGACRKHGEVEFG------------ERLGKILL--EMEPQNRRCDDVAKMRKL 510
+W +LL ACR G VE ER G +L + R +D+AK+R
Sbjct: 639 DVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLS 698
Query: 511 MKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSSQV 570
MKE+G++ PG+S I + G HEF +GD SHP++ I ML ++ ++ G+ P+ S V
Sbjct: 699 MKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNV 758
Query: 571 LFDIDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLISKVFKR 630
L D+DE+EK HSEKLA+A+G I+++ G TIR++KNLRVC DCHS K SKV+ R
Sbjct: 759 LMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNR 818
Query: 631 DIIVRDRVRYHHFRNGKCSCNDFW 654
+II+RD R+H+ R GKCSC DFW
Sbjct: 819 EIILRDNNRFHYIRQGKCSCGDFW 842
Score = 162 bits (410), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 134/534 (25%), Positives = 223/534 (41%), Gaps = 90/534 (16%)
Query: 1 MSTKVTTTDLPHHLKPEEISATNIPTSEFSQKTILDILNTKCHTSWQHLKQAHAVILKSG 60
M TTT P L + + P+S + KTI LK H + K G
Sbjct: 13 MVLATTTTTKPSLLNQSKCTKAT-PSSLKNCKTI------------DELKMFHRSLTKQG 59
Query: 61 HFQDHYVSGTLV--KCHANSRFSNFELALKVF-NSVHKPNVFVWNSVLRACLEHNEPWRV 117
D LV C +R S A +VF NS F++NS++R
Sbjct: 60 LDNDVSTITKLVARSCELGTRES-LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEA 118
Query: 118 ISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQM 177
I L+ M+ P+K+T+P AC+ + A G+Q+H +VK G D+ V++S +
Sbjct: 119 ILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHF 178
Query: 178 YACFGCVNKARQILDDGSKSDVICWNALIDGY---------------------------- 209
YA G ++ AR++ D+ S+ +V+ W ++I GY
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVT 238
Query: 210 --------LKCGDIEGAKELFKSTKDKNTGSYNAMISG----FARFGRFEEARKLFNEMN 257
K D+E ++++ ++ + M+S + + + A++LF+E
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYG 298
Query: 258 DKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIW 317
+ +A+ Y + G +EAL VFN M ++P + + +++C+ L + G
Sbjct: 299 ASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKS 358
Query: 318 IHDHVKRNSICVDAVLGTALVDMYAKC-------------------------------GR 346
H +V RN + AL+DMY KC G
Sbjct: 359 CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 347 LDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQ-REKMRPDRITFACVLS 405
+D AW+ FE M K + +WN +I GL ++AIE+F MQ +E + D +T + S
Sbjct: 419 VDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIAS 478
Query: 406 ACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSM 459
AC H G +D Y+++ GI +V +VD+ R G A + +S+
Sbjct: 479 ACGHLGALDLAKWIYYYIEK-NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/635 (34%), Positives = 341/635 (53%), Gaps = 69/635 (10%)
Query: 48 HLKQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRA 107
+KQ H +L+ G Q Y+ L++ A +V V N F+W +V+R
Sbjct: 64 QIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRG 123
Query: 108 CLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVK-NGLCG 166
+ I++Y M + P FT+ + KAC + G Q HA + G C
Sbjct: 124 YAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCF 183
Query: 167 DVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKSTK 226
V N +ID Y+KC I+ A+++F
Sbjct: 184 --------------------------------VYVGNTMIDMYVKCESIDCARKVFDEMP 211
Query: 227 DKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNE 286
+++ S+ +I+ +AR G E A +LF + KD + W+A++ G+ ++ +EALE F+
Sbjct: 212 ERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDR 271
Query: 287 MQRDKIKPRKFVLSCVLAACASLGA---LDQGIWI--------HDHVKRNSICVDAVLGT 335
M++ I+ + ++ ++ACA LGA D+ + I DHV V+G+
Sbjct: 272 MEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHV---------VIGS 322
Query: 336 ALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELF-FKMQREKMR 394
AL+DMY+KCG ++ A VF M K VFT+++MI GLA HGRA +A+ LF + + + +++
Sbjct: 323 ALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIK 382
Query: 395 PDRITFACVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEE 454
P+ +TF L AC+H+G++D+G Q M Q +G+ P +HY C+VDLLGR G L EA E
Sbjct: 383 PNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALE 442
Query: 455 VISSMPMEPNAAVWEALLGACRKHGEVEFGERLGKILLEMEP--------------QNRR 500
+I +M +EP+ VW ALLGACR H E E + L E+EP
Sbjct: 443 LIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGD 502
Query: 501 CDDVAKMRKLMKERGIKTNPGSS-MIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLK 559
V ++RKL+KE+G+K P S ++D NG +H+F G+ +HP +I L++++E+L
Sbjct: 503 WGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLT 562
Query: 560 MEGYSPNSSQVLFDIDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHS 619
+ GY P+ S V +D+ + K H+EKLA+AF + T+ +TI ++KNLR+C DCH
Sbjct: 563 VLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHK 622
Query: 620 ATKLISKVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
+L S+V + II+RD +R+HHFR+G CSC DFW
Sbjct: 623 FMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/572 (34%), Positives = 323/572 (56%), Gaps = 54/572 (9%)
Query: 136 YPTVFKACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGS 195
Y T+ K C++ + +G VHAH++++ D+ + ++ + MYA G + +AR++ +
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 196 KSDVICWNALIDGY----------------LKCGDIEGAKELFKSTK------------- 226
+ D + W LI GY L+ G L K
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 227 ----------DKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGY 276
D N +A++ + R+G ++A+ +F+ + +++++W+A+I G+ +
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 277 YKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTA 336
++ALE+F M RD +P F + + AC+S G L+QG W+H ++ ++ + A G
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 337 LVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPD 396
L+DMYAK G + A K+F+ + ++V +WN+++ A HG +A+ F +M+R +RP+
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 397 RITFACVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVI 456
I+F VL+AC+H+G++D G M++ GI PE HY +VDLLGRAG L A I
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 457 SSMPMEPNAAVWEALLGACRKHGEVEFGERLGKILLEMEPQNR--------------RCD 502
MP+EP AA+W+ALL ACR H E G + + E++P + R +
Sbjct: 422 EEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWN 481
Query: 503 DVAKMRKLMKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEG 562
D A++RK MKE G+K P S +++ IH F D HPQ +EI ++++ K+K G
Sbjct: 482 DAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELG 541
Query: 563 YSPNSSQVLFDIDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATK 622
Y P++S V+ +D++E+E +YHSEK+A+AF +NT PG+TI + KN+RVC DCH+A K
Sbjct: 542 YVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIK 601
Query: 623 LISKVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
L SKV R+IIVRD R+HHF++G CSC D+W
Sbjct: 602 LASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 202/445 (45%), Gaps = 53/445 (11%)
Query: 2 STKVTTTDLPHHLKPEEISATNIPTSEFSQKTILDILNTKCHTSWQHLKQA---HAVILK 58
S K + DL ++ + IP T+L KC T ++ L Q HA IL+
Sbjct: 34 SLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLL----KKC-TVFKLLIQGRIVHAHILQ 88
Query: 59 SGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRACLEHNEPWRVI 118
S D + TL+ +A + + E A KVF + + + W +++ +H+ P +
Sbjct: 89 SIFRHDIVMGNTLLNMYA--KCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDAL 146
Query: 119 SLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMY 178
+++M+ PN+FT +V KA + G Q+H VK G +VHV S+ + +Y
Sbjct: 147 LFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLY 206
Query: 179 ACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFK--------------- 223
+G ++ A+ + D + + WNALI G+ + E A ELF+
Sbjct: 207 TRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYA 266
Query: 224 -------STKDKNTGSY-----------------NAMISGFARFGRFEEARKLFNEMNDK 259
ST G + N ++ +A+ G +ARK+F+ + +
Sbjct: 267 SLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR 326
Query: 260 DEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIH 319
D ++W++++ Y + G+ KEA+ F EM+R I+P + VL AC+ G LD+G +
Sbjct: 327 DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY 386
Query: 320 DHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFT-WNAMIGGLAMHGRA 378
+ +K++ I +A +VD+ + G L+ A + E+M ++ W A++ MH
Sbjct: 387 ELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNT 446
Query: 379 D---DAIELFFKMQREKMRPDRITF 400
+ A E F++ + P I +
Sbjct: 447 ELGAYAAEHVFELDPDDPGPHVILY 471
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 3/196 (1%)
Query: 285 NEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKC 344
N+++ I + + +L C L QG +H H+ ++ D V+G L++MYAKC
Sbjct: 49 NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC 108
Query: 345 GRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVL 404
G L+ A KVFE M ++ TW +I G + H R DA+ F +M R P+ T + V+
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168
Query: 405 SACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPN 464
A A G Q + + G D V ++DL R G + +A+ V ++ N
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKC-GFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR-N 226
Query: 465 AAVWEALL-GACRKHG 479
W AL+ G R+ G
Sbjct: 227 DVSWNALIAGHARRSG 242
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/665 (32%), Positives = 358/665 (53%), Gaps = 72/665 (10%)
Query: 56 ILKSGHFQDHYVSGTLVKCHANSRF----SNFELALKVFNSVHKPNVFVWNSVLRACLEH 111
++K+GHF+ S V C F ++FE A KVF+ + + NV W ++ C++
Sbjct: 192 LMKTGHFE----SDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247
Query: 112 NEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCGDVHVK 171
P I + +MV + +KFT +VF AC+ E G Q+H+ +++GL DV +
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--E 305
Query: 172 SSGIQMYA---CFGCVNKARQILDDGSKSDVICWNALIDGYLK----------------- 211
S + MYA G V+ R++ D V+ W ALI GY+K
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMIT 365
Query: 212 -----------------CGDIEGAK-------ELFKSTKDKNTGSYNAMISGFARFGRFE 247
CG++ + + FK N+ N++IS F + R E
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425
Query: 248 EARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACA 307
+A++ F +++K+ ++++ +DG ++ +++A ++ +E+ ++ F + +L+ A
Sbjct: 426 DAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVA 485
Query: 308 SLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNA 367
++G++ +G IH V + + + + AL+ MY+KCG +D A +VF M+ + V +W +
Sbjct: 486 NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTS 545
Query: 368 MIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMY 427
MI G A HG A +E F +M E ++P+ +T+ +LSAC+H G++ G + M + +
Sbjct: 546 MITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDH 605
Query: 428 GIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGERL 487
I P++EHY C+VDLL RAG L +A E I++MP + + VW LGACR H E G+
Sbjct: 606 KIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLA 665
Query: 488 GKILLEMEPQNR--------------RCDDVAKMRKLMKERGIKTNPGSSMIDVNGVIHE 533
+ +LE++P + ++ +MR+ MKER + G S I+V IH+
Sbjct: 666 ARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHK 725
Query: 534 FRTGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVLFDIDEEEKETAPK----YHSEK 589
F GD +HP +IY L ++I ++K GY P++ VL ++EE E + HSEK
Sbjct: 726 FYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEK 785
Query: 590 LAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYHHFRNGKCS 649
+A+AFG I+T +RV KNLRVC DCH+A K IS V R+I++RD R+HHF++GKCS
Sbjct: 786 IAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCS 845
Query: 650 CNDFW 654
CND+W
Sbjct: 846 CNDYW 850
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 198/465 (42%), Gaps = 73/465 (15%)
Query: 135 TYPTVFKACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDG 194
T+ ++ K+C + G VHA +++ + D + +S I +Y+ G KA + +
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 195 ---SKSDVICWNALIDGYLKCG-DIEGAK---ELFKSTKDKNTGSYNAMI-----SGFAR 242
K DV+ W+A++ Y G +++ K E + N Y A+I S F
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 243 FGR--------------------------------FEEARKLFNEMNDKDEITWSAIIDG 270
GR FE A K+F++M++ + +TW+ +I
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243
Query: 271 YTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVD 330
+ G+ +EA+ F +M + KF LS V +ACA L L G +H R+ + D
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD 303
Query: 331 AVLGTALVDMYAKC---GRLDMAWKVFEDMKMKEVFTWNAMIGGLAMH-GRADDAIELFF 386
+ +LVDMYAKC G +D KVF+ M+ V +W A+I G + A +AI LF
Sbjct: 304 --VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFS 361
Query: 387 KM-QREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGR 445
+M + + P+ TF+ AC + G Q L + G+ ++ + +
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR-GLASNSSVANSVISMFVK 420
Query: 446 AGYLAEAEEVISSMPMEPNAAVWEALL-GACRKHGEVEFGERLGKILLEMEPQNRRCDDV 504
+ + +A+ S+ E N + L G CR + F E+ K+L E+
Sbjct: 421 SDRMEDAQRAFESLS-EKNLVSYNTFLDGTCRN---LNF-EQAFKLLSEITE-------- 467
Query: 505 AKMRKLMKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYL 549
+E G+ +S++ + R G+ H QV ++ L
Sbjct: 468 -------RELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 505
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 200/476 (42%), Gaps = 49/476 (10%)
Query: 50 KQAHAVILKSGHFQDHYVSGTLVKCHANSRFS-NFELALKVFNSVHKPNVFVWNSVLRAC 108
K HA +++ D + +L+ ++ S S E + K +V W++++ AC
Sbjct: 82 KLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMM-AC 140
Query: 109 LEHN-EPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNG-LCG 166
+N I ++ E + + PN + Y V +ACS ++ G ++K G
Sbjct: 141 YGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFES 200
Query: 167 DVHVKSSGIQMYA-CFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKEL---- 221
DV V S I M+ A ++ D S+ +V+ W +I ++ G A
Sbjct: 201 DVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM 260
Query: 222 ----FKSTKDKNTGSYNA-----------------------------MISGFARF---GR 245
F+S K + ++A ++ +A+ G
Sbjct: 261 VLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGS 320
Query: 246 FEEARKLFNEMNDKDEITWSAIIDGYTKD-GYYKEALEVFNEM-QRDKIKPRKFVLSCVL 303
++ RK+F+ M D ++W+A+I GY K+ EA+ +F+EM + ++P F S
Sbjct: 321 VDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAF 380
Query: 304 AACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVF 363
AC +L G + + + ++ + +++ M+ K R++ A + FE + K +
Sbjct: 381 KACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLV 440
Query: 364 TWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYM 423
++N + G + + A +L ++ ++ TFA +LS A+ G I +G Q + +
Sbjct: 441 SYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQV 500
Query: 424 QQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHG 479
++ G+ ++ + + G + A V + M N W +++ KHG
Sbjct: 501 VKL-GLSCNQPVCNALISMYSKCGSIDTASRVFNFME-NRNVISWTSMITGFAKHG 554
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 115/251 (45%), Gaps = 18/251 (7%)
Query: 182 GCVNKARQILDDGSKS-DVICWNALIDGYLKCGDIEGAK----ELFKSTKDKNTGSYNAM 236
G V+ + DG + D + +++L+ ++ D K L + + ++ YN++
Sbjct: 44 GAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSL 103
Query: 237 ISGFARFGRFEEARKLFNEM---NDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIK 293
IS +++ G +A +F M +D ++WSA++ Y +G +A++VF E +
Sbjct: 104 ISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV 163
Query: 294 PRKFVLSCVLAACAS-----LGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKC-GRL 347
P + + V+ AC++ +G + G + + +CV G +L+DM+ K
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCV----GCSLIDMFVKGENSF 219
Query: 348 DMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSAC 407
+ A+KVF+ M V TW MI G +AI F M D+ T + V SAC
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 408 AHAGMIDRGLQ 418
A + G Q
Sbjct: 280 AELENLSLGKQ 290
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 8/211 (3%)
Query: 275 GYYKEALEVFNEMQRDKIKPRKFV-LSCVLAACASLGALDQGIWIHDHVKRNSICVDAVL 333
G + A+ + M RD I+P V S +L +C G +H + I D+VL
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVL 99
Query: 334 GTALVDMYAKCGRLDMAWKVFEDMKM---KEVFTWNAMIGGLAMHGRADDAIELFFKMQR 390
+L+ +Y+K G A VFE M+ ++V +W+AM+ +GR DAI++F +
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159
Query: 391 EKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGC-IVDLLGRA-GY 448
+ P+ + V+ AC+++ + G L ++ + + +V GC ++D+ +
Sbjct: 160 LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDV-CVGCSLIDMFVKGENS 218
Query: 449 LAEAEEVISSMPMEPNAAVWEALLGACRKHG 479
A +V M E N W ++ C + G
Sbjct: 219 FENAYKVFDKMS-ELNVVTWTLMITRCMQMG 248
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 388 bits (996), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/486 (39%), Positives = 289/486 (59%), Gaps = 15/486 (3%)
Query: 184 VNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKSTKDKNTGSYNAMISGFARF 243
V+ AR++ + + + W +++ GY G IE A+E F+ K + NAMI GF
Sbjct: 219 VDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEV 278
Query: 244 GRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVL 303
G +AR++F+ M D+D TW +I Y + G+ EAL++F +MQ+ ++P L +L
Sbjct: 279 GEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISIL 338
Query: 304 AACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVF 363
+ CA+L +L G +H H+ R D + + L+ MY KCG L A VF+ K++
Sbjct: 339 SVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDII 398
Query: 364 TWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYM 423
WN++I G A HG ++A+++F +M P+++T +L+AC++AG ++ GL+ M
Sbjct: 399 MWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESM 458
Query: 424 QQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEF 483
+ + + P VEHY C VD+LGRAG + +A E+I SM ++P+A VW ALLGAC+ H ++
Sbjct: 459 ESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDL 518
Query: 484 GERLGKILLEMEPQN--------------RRCDDVAKMRKLMKERGIKTNPGSSMIDVNG 529
E K L E EP N + DVA +RK M+ + PG S I+V
Sbjct: 519 AEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGK 578
Query: 530 VIHEF-RTGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVLFDIDEEEKETAPKYHSE 588
+H F R G +HP+ I +ML+K L+ GYSP+ S VL D+DEEEK + HSE
Sbjct: 579 KVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSE 638
Query: 589 KLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYHHFRNGKC 648
+LA+A+G + G IRV+KNLRVC DCH+A KLISKV +R+II+RD R+HHF NG+C
Sbjct: 639 RLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGEC 698
Query: 649 SCNDFW 654
SC D+W
Sbjct: 699 SCRDYW 704
Score = 115 bits (289), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 155/323 (47%), Gaps = 28/323 (8%)
Query: 172 SSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKSTKDKNTG 231
+S + Y G +ARQ+ D+ S+ +V+ WN L+ GY+K I A+ +F+ ++N
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 232 SYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDK 291
S+ AM+ G+ + G EA LF M +++E++W+ + G DG +A ++++ M
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMM---- 167
Query: 292 IKPRKFVLSC--VLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDM 349
P K V++ ++ G +D+ I D ++ ++ V T ++ Y + R+D+
Sbjct: 168 --PVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV----VTWTTMITGYRQNNRVDV 221
Query: 350 AWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFAC--VLSAC 407
A K+FE M K +W +M+ G + GR +DA E F M P + AC ++
Sbjct: 222 ARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM------PMKPVIACNAMIVGF 275
Query: 408 AHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMP---MEPN 464
G I + + M+ D + + ++ R G+ EA ++ + M + P+
Sbjct: 276 GEVGEISKARRVFDLME-----DRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPS 330
Query: 465 AAVWEALLGACRKHGEVEFGERL 487
++L C +++G ++
Sbjct: 331 FPSLISILSVCATLASLQYGRQV 353
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 143/306 (46%), Gaps = 20/306 (6%)
Query: 175 IQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKSTKDKNTGSYN 234
I + G +N+AR+ D + WN+++ GY G + A++LF ++N S+N
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 235 AMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEM-QRDKIK 293
++SG+ + EAR +F M +++ ++W+A++ GY ++G EA +F M +R+++
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS 143
Query: 294 PRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKV 353
+ + G +D+ ++D + D V T ++ + GR+D A +
Sbjct: 144 -----WTVMFGGLIDDGRIDKARKLYDMMP----VKDVVASTNMIGGLCREGRVDEARLI 194
Query: 354 FEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMI 413
F++M+ + V TW MI G + R D A +LF M + +++ +L +G I
Sbjct: 195 FDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKT----EVSWTSMLLGYTLSGRI 250
Query: 414 DRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLG 473
+ + M + P + IV G G +++A V M NA W ++
Sbjct: 251 EDAEEFFEVMP----MKPVIACNAMIVG-FGEVGEISKARRVFDLMEDRDNAT-WRGMIK 304
Query: 474 ACRKHG 479
A + G
Sbjct: 305 AYERKG 310
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 136/279 (48%), Gaps = 22/279 (7%)
Query: 211 KCGDIEGAKELFKSTKDKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDG 270
+ G I A++ F S + K GS+N+++SG+ G +EAR+LF+EM++++ ++W+ ++ G
Sbjct: 29 RIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSG 88
Query: 271 YTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVD 330
Y K+ EA VF M + ++ + +G + W +RN +
Sbjct: 89 YIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQE-GMVGEAESLFW--RMPERNEVSWT 145
Query: 331 AVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQR 390
+ G + D GR+D A K+++ M +K+V MIGGL GR D+A L F R
Sbjct: 146 VMFGGLIDD-----GRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEA-RLIFDEMR 199
Query: 391 EKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGR--AGY 448
E+ + +T+ +++ +D ++++ + PE LLG +G
Sbjct: 200 ER---NVVTWTTMITGYRQNNRVD-------VARKLFEVMPEKTEVSWTSMLLGYTLSGR 249
Query: 449 LAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGERL 487
+ +AEE MPM+P A A++ + GE+ R+
Sbjct: 250 IEDAEEFFEVMPMKPVIAC-NAMIVGFGEVGEISKARRV 287
Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 131/298 (43%), Gaps = 19/298 (6%)
Query: 32 KTILDILNTKCHTSWQHLKQAHAV---ILKSGHFQDHYVSGTLVKCHAN----SRFSNFE 84
+ + +++ K SW + + + I + F + ++ C+A
Sbjct: 223 RKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEIS 282
Query: 85 LALKVFNSVHKPNVFVWNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACS 144
A +VF+ + + W +++A + L+++M +P+ + ++ C+
Sbjct: 283 KARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCA 342
Query: 145 ITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNA 204
+ + G QVHAH+V+ DV+V S + MY G + KA+ + D S D+I WN+
Sbjct: 343 TLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNS 402
Query: 205 LIDGYLKCGDIEGAKELF----KSTKDKNTGSYNAMISGFARFGRFEEARKLFNEMNDKD 260
+I GY G E A ++F S N + A+++ + G+ EE ++F M K
Sbjct: 403 IISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKF 462
Query: 261 EIT-----WSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALD 313
+T +S +D + G +A+E+ M IKP V +L AC + LD
Sbjct: 463 CVTPTVEHYSCTVDMLGRAGQVDKAMELIESMT---IKPDATVWGALLGACKTHSRLD 517
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/603 (36%), Positives = 325/603 (53%), Gaps = 61/603 (10%)
Query: 106 RACLEHNEPWRVI----SLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVK 161
R C + + P R + SL S + DS TY + K C A EG + H+
Sbjct: 35 RLCYQRDLP-RAMKAMDSLQSHGLWADSA----TYSELIKCCISNRAVHEGNLICRHLYF 89
Query: 162 NGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKEL 221
NG + + + I MY F +N A Q+ D + +VI W +I Y KC + A EL
Sbjct: 90 NGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALEL 149
Query: 222 F----KSTKDKNTGSYN--------------------------------AMISGFARFGR 245
+ N +Y+ A+I FA+ G
Sbjct: 150 LVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGE 209
Query: 246 FEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAA 305
E+A +F+EM D I W++II G+ ++ ALE+F M+R + L+ VL A
Sbjct: 210 PEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 269
Query: 306 CASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTW 365
C L L+ G+ H H+ + D +L ALVDMY KCG L+ A +VF MK ++V TW
Sbjct: 270 CTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITW 327
Query: 366 NAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQ 425
+ MI GLA +G + +A++LF +M+ +P+ IT VL AC+HAG+++ G M++
Sbjct: 328 STMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKK 387
Query: 426 MYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGE 485
+YGIDP EHYGC++DLLG+AG L +A ++++ M EP+A W LLGACR + E
Sbjct: 388 LYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAE 447
Query: 486 RLGKILLEMEPQN--------------RRCDDVAKMRKLMKERGIKTNPGSSMIDVNGVI 531
K ++ ++P++ ++ D V ++R M++RGIK PG S I+VN I
Sbjct: 448 YAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQI 507
Query: 532 HEFRTGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVLFDIDEEEKETAPKYHSEKLA 591
H F GD SHPQ+ E+ L ++I +L GY P ++ VL D++ E+ E + ++HSEKLA
Sbjct: 508 HAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLA 567
Query: 592 IAFGFINTDPGATIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYHHFRNGKCSCN 651
+AFG + IR+ KNLR+C DCH KL SK+ R I++RD +RYHHF++GKCSC
Sbjct: 568 LAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCG 627
Query: 652 DFW 654
D+W
Sbjct: 628 DYW 630
Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 265 SAIIDGYTKDGYYKE---ALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDH 321
+ ++ +T+ Y ++ A++ + +Q + S ++ C S A+ +G I H
Sbjct: 27 TLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRH 86
Query: 322 VKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDA 381
+ N L L++MY K L+ A ++F+ M + V +W MI + A
Sbjct: 87 LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKA 146
Query: 382 IELFFKMQREKMRPDRITFACVLSAC--------AHAGMIDRGLQALTYMQQMYGIDPEV 433
+EL M R+ +RP+ T++ VL +C H G+I GL++ +++
Sbjct: 147 LELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVR--------- 197
Query: 434 EHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGERLGK 489
++D+ + G +A V M + +A VW +++G ++ + L K
Sbjct: 198 ---SALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFK 249
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 387 bits (993), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/632 (34%), Positives = 334/632 (52%), Gaps = 34/632 (5%)
Query: 50 KQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVL---- 105
KQ H V SG D +V G++ H R A KVF+ + +V +++L
Sbjct: 136 KQIHCVSCVSGLDMDAFVQGSMF--HMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYA 193
Query: 106 -RACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGL 164
+ CLE V+ + SEM + N ++ + + + KE V + + G
Sbjct: 194 RKGCLE-----EVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGF 248
Query: 165 CGDVHVKSSGIQMYACFGCVNKARQI----LDDGSKSDVICWNALIDGYLKCGDIEGAKE 220
C D SS + +N R I + G D +A+ID Y K G + G
Sbjct: 249 CPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIIS 308
Query: 221 LFKSTKDKNTGSYNAMISGFARFGRFEEARKLFNEMNDK----DEITWSAIIDGYTKDGY 276
LF + G NA I+G +R G ++A ++F ++ + ++W++II G ++G
Sbjct: 309 LFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGK 368
Query: 277 YKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTA 336
EALE+F EMQ +KP + +L AC ++ AL G H R + + +G+A
Sbjct: 369 DIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSA 428
Query: 337 LVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPD 396
L+DMYAKCGR++++ VF M K + WN+++ G +MHG+A + + +F + R +++PD
Sbjct: 429 LIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPD 488
Query: 397 RITFACVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVI 456
I+F +LSAC G+ D G + M + YGI P +EHY C+V+LLGRAG L EA ++I
Sbjct: 489 FISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLI 548
Query: 457 SSMPMEPNAAVWEALLGACRKHGEVEFGERLGKILLEMEPQNRRC--------------D 502
MP EP++ VW ALL +CR V+ E + L +EP+N
Sbjct: 549 KEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWT 608
Query: 503 DVAKMRKLMKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEG 562
+V +R M+ G+K NPG S I V ++ GD SHPQ+ +I + +I ++++ G
Sbjct: 609 EVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSG 668
Query: 563 YSPNSSQVLFDIDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATK 622
+ PN L D++E+E+E HSEKLA+ FG +NT G ++VIKNLR+C DCH+ K
Sbjct: 669 HRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIK 728
Query: 623 LISKVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
IS R+I +RD R+HHF++G CSC DFW
Sbjct: 729 FISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/471 (25%), Positives = 208/471 (44%), Gaps = 74/471 (15%)
Query: 51 QAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRACLE 110
QAHA ILKSG D Y+S L+ ++N ++ F A V S+ P ++ ++S++ A +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSN--YNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 111 HNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCGDVHV 170
+ I ++S M P+ P +FK C+ A K G Q+H +GL D V
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 171 KSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGA----KELFKSTK 226
+ S MY G + AR++ D S DV+ +AL+ Y + G +E E+ S
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 227 DKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNE 286
+ N S+N ++SGF R GY+KEA+ +F +
Sbjct: 214 EANIVSWNGILSGFNR-------------------------------SGYHKEAVVMFQK 242
Query: 287 MQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGR 346
+ P + +S VL + L+ G IH +V + + D + +A++DMY K G
Sbjct: 243 IHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGH 302
Query: 347 -------------------------------LDMAWKVFEDMKMK----EVFTWNAMIGG 371
+D A ++FE K + V +W ++I G
Sbjct: 303 VYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAG 362
Query: 372 LAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGIDP 431
A +G+ +A+ELF +MQ ++P+ +T +L AC + + G + +++ +D
Sbjct: 363 CAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD- 421
Query: 432 EVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVE 482
V ++D+ + G + ++ V + MP + N W +L+ HG+ +
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSMHGKAK 471
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 170/404 (42%), Gaps = 59/404 (14%)
Query: 228 KNTGSYNA-MISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNE 286
+N G +A +I+ ++ + F +A + + D ++S++I TK + +++ VF+
Sbjct: 47 QNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSR 106
Query: 287 MQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGR 346
M + P VL + CA L A G IH + + +DA + ++ MY +CGR
Sbjct: 107 MFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGR 166
Query: 347 LDMAWKVFEDMKMKEVFT-----------------------------------WNAMIGG 371
+ A KVF+ M K+V T WN ++ G
Sbjct: 167 MGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSG 226
Query: 372 LAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGIDP 431
G +A+ +F K+ PD++T + VL + + M++ G Y+ + G+
Sbjct: 227 FNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQ-GLLK 285
Query: 432 EVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGERLGKIL 491
+ ++D+ G++G++ + + M A V A + ++G V+ + ++
Sbjct: 286 DKCVISAMIDMYGKSGHVYGIISLFNQFEMM-EAGVCNAYITGLSRNGLVDKALEMFELF 344
Query: 492 LE--ME-------------PQNRRCDDVAKMRKLMKERGIKTNPGS--SMIDVNGVIHEF 534
E ME QN + + ++ + M+ G+K N + SM+ G I
Sbjct: 345 KEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAAL 404
Query: 535 RTGDGSHPQVKEIYLMLKKIIEKLKMEGYSP----NSSQVLFDI 574
G +H ++L+ + ++ Y+ N SQ++F++
Sbjct: 405 GHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNM 448
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/572 (34%), Positives = 322/572 (56%), Gaps = 47/572 (8%)
Query: 98 VFVWNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHA 157
+ +N+++ + + + MV + ++FTYP+V +AC+ + G QVHA
Sbjct: 251 LVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHA 310
Query: 158 HVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEG 217
+V++ D D N+L+ Y KCG +
Sbjct: 311 YVLRRE----------------------------DFSFHFD----NSLVSLYYKCGKFDE 338
Query: 218 AKELFKSTKDKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYY 277
A+ +F+ K+ S+NA++SG+ G EA+ +F EM +K+ ++W +I G ++G+
Sbjct: 339 ARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFG 398
Query: 278 KEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTAL 337
+E L++F+ M+R+ +P + S + +CA LGA G H + + G AL
Sbjct: 399 EEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNAL 458
Query: 338 VDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDR 397
+ MYAKCG ++ A +VF M + +WNA+I L HG +A++++ +M ++ +RPDR
Sbjct: 459 ITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDR 518
Query: 398 ITFACVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVIS 457
IT VL+AC+HAG++D+G + M+ +Y I P +HY ++DLL R+G ++AE VI
Sbjct: 519 ITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIE 578
Query: 458 SMPMEPNAAVWEALLGACRKHGEVEFG------------ERLGKILL--EMEPQNRRCDD 503
S+P +P A +WEALL CR HG +E G E G +L M + ++
Sbjct: 579 SLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEE 638
Query: 504 VAKMRKLMKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEGY 563
VA++RKLM++RG+K S I++ +H F D SHP+ + +Y+ L+ + ++++ GY
Sbjct: 639 VARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGY 698
Query: 564 SPNSSQVLFDIDEE-EKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATK 622
P++S VL D++ + KE HSEK+A+AFG + PG TIR+ KNLR C DCH+ +
Sbjct: 699 VPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFR 758
Query: 623 LISKVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
+S V +RDII+RDR R+HHFRNG+CSC +FW
Sbjct: 759 FLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 185/425 (43%), Gaps = 81/425 (19%)
Query: 97 NVFVWNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEAD-KEGVQV 155
+ ++N+++ +N+ + I+L+ +M KP+ FT+ +V ++ D K+ VQ
Sbjct: 112 DTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQF 171
Query: 156 HAHVVKNGLCGDVHVKSSGIQMY----ACFGCVNKARQILDDGSKSDVICWNALIDGYLK 211
HA +K+G V ++ + +Y + ++ AR++ D+ + D W ++ GY+K
Sbjct: 172 HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVK 231
Query: 212 CGDIEGAKELFKSTKDK-NTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDG 270
G + +EL + D +YNAMISG+ G ++E
Sbjct: 232 NGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQE---------------------- 269
Query: 271 YTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRN---SI 327
ALE+ M I+ +F V+ ACA+ G L G +H +V R S
Sbjct: 270 ---------ALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF 320
Query: 328 CVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNA-------------------- 367
D +LV +Y KCG+ D A +FE M K++ +WNA
Sbjct: 321 HFD----NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKE 376
Query: 368 -----------MIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRG 416
MI GLA +G ++ ++LF M+RE P F+ + +CA G G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 417 LQALTYMQQMY--GIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGA 474
Q Y Q+ G D + ++ + + G + EA +V +MP ++ W AL+ A
Sbjct: 437 QQ---YHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAA 492
Query: 475 CRKHG 479
+HG
Sbjct: 493 LGQHG 497
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 147/367 (40%), Gaps = 75/367 (20%)
Query: 155 VHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGD 214
VH +++ G H+ + I +Y +N ARQ+ D+ S+ D I ++ GY GD
Sbjct: 36 VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95
Query: 215 IEGAKELFKSTKD--KNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYT 272
I A+ +F+ ++T YNAMI+GF+ +
Sbjct: 96 ITLARGVFEKAPVCMRDTVMYNAMITGFS-----------------------------HN 126
Query: 273 KDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALD--QGIWIHDHVKRNSICVD 330
DGY A+ +F +M+ + KP F + VLA A L A D Q + H ++
Sbjct: 127 NDGY--SAINLFCKMKHEGFKPDNFTFASVLAGLA-LVADDEKQCVQFHAAALKSGAGYI 183
Query: 331 AVLGTALVDMYAKCGR----LDMAWKVFEDMKMKEVFTW--------------------- 365
+ ALV +Y+KC L A KVF+++ K+ +W
Sbjct: 184 TSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLE 243
Query: 366 -----------NAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMID 414
NAMI G G +A+E+ +M + D T+ V+ ACA AG++
Sbjct: 244 GMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQ 303
Query: 415 RGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGA 474
G Q Y+ + D +V L + G EA + MP + + W ALL
Sbjct: 304 LGKQVHAYVLRRE--DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSG 360
Query: 475 CRKHGEV 481
G +
Sbjct: 361 YVSSGHI 367
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust.
Identities = 231/730 (31%), Positives = 357/730 (48%), Gaps = 109/730 (14%)
Query: 26 TSEFSQKTILDILNTKCHTSWQHLKQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFEL 85
T F K +I + +C S AHA+ L +G + +V LV + SR +
Sbjct: 129 TFPFVFKACGEISSVRCGES------AHALSLVTGFISNVFVGNALVAMY--SRCRSLSD 180
Query: 86 ALKVFNSVHKPNVFVWNSVLRACLEHNEPWRVISLYSEMVG-VDSKPNKFTYPTVFKACS 144
A KVF+ + +V WNS++ + + +P + ++S M +P+ T V C+
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 145 ITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGS--------- 195
G Q+H V + + ++ V + + MYA G +++A + + S
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 196 --------------------------KSDVICWNALIDGY-------------------- 209
K DV+ W+A I GY
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 210 --------------------------LKCGDIEGAKELFKSTKDKNTGSYNAMISGFARF 243
+ C I+ +L K+ N +I +A+
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 244 GRFEEARKLFNEMN--DKDEITWSAIIDGYTKDGYYKEALEVFNEMQRD--KIKPRKFVL 299
+ + AR +F+ ++ ++D +TW+ +I GY++ G +ALE+ +EM + + +P F +
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Query: 300 SCVLAACASLGALDQGIWIHDHVKRNSI-CVDAVLGTALVDMYAKCGRLDMAWKVFEDMK 358
SC L ACASL AL G IH + RN V + L+DMYAKCG + A VF++M
Sbjct: 481 SCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMM 540
Query: 359 MKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQ 418
K TW +++ G MHG ++A+ +F +M+R + D +T VL AC+H+GMID+G++
Sbjct: 541 AKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME 600
Query: 419 ALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKH 478
M+ ++G+ P EHY C+VDLLGRAG L A +I MPMEP VW A L CR H
Sbjct: 601 YFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIH 660
Query: 479 GEVEFGERLGKILLEMEPQNR--------------RCDDVAKMRKLMKERGIKTNPGSSM 524
G+VE GE + + E+ + R DV ++R LM+ +G+K PG S
Sbjct: 661 GKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSW 720
Query: 525 IDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVLFDIDEEEKETAPK 584
++ F GD +HP KEIY +L ++++K GY P + L D+D+EEK+
Sbjct: 721 VEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLF 780
Query: 585 YHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYHHFR 644
HSEKLA+A+G + T GA IR+ KNLRVC DCH+A +S++ DII+RD R+HHF+
Sbjct: 781 EHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFK 840
Query: 645 NGKCSCNDFW 654
NG CSC +W
Sbjct: 841 NGSCSCKGYW 850
Score = 186 bits (472), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 227/499 (45%), Gaps = 90/499 (18%)
Query: 98 VFVWNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHA 157
V+ WNS++R+ ++ + + L+ M + P+ +T+P VFKAC + + G HA
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 158 HVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEG 217
+ G +V V ++ + MY+ ++ AR++ D+ S DV+ WN++I+ Y K G +
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 211
Query: 218 AKELFKSTKD----------------------------------------KNTGSYNAMI 237
A E+F + +N N ++
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 271
Query: 238 SGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDK------ 291
+A+ G +EA +F+ M+ KD ++W+A++ GY++ G +++A+ +F +MQ +K
Sbjct: 272 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 331
Query: 292 -----------------------------IKPRKFVLSCVLAACASLGALDQGIWIHDH- 321
IKP + L VL+ CAS+GAL G IH +
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391
Query: 322 ------VKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKE--VFTWNAMIGGLA 373
+++N + ++ L+DMYAKC ++D A +F+ + KE V TW MIGG +
Sbjct: 392 IKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS 451
Query: 374 MHGRADDAIELFFKMQRE--KMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGIDP 431
HG A+ A+EL +M E + RP+ T +C L ACA + G Q Y +
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV 511
Query: 432 EVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGERLGKIL 491
+ C++D+ + G +++A V +M M N W +L+ HG +GE I
Sbjct: 512 PLFVSNCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHG---YGEEALGIF 567
Query: 492 LEMEPQNRRCDDVAKMRKL 510
EM + D V + L
Sbjct: 568 DEMRRIGFKLDGVTLLVVL 586
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/659 (32%), Positives = 333/659 (50%), Gaps = 57/659 (8%)
Query: 50 KQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRACL 109
+Q HA K G ++ + G L+ +A + ++ E AL F NV +WN +L A
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYA--KCADIETALDYFLETEVENVVLWNVMLVAYG 466
Query: 110 EHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKE-GVQVHAHVVKNGLCGDV 168
++ ++ +M + PN++TYP++ K C I D E G Q+H+ ++K +
Sbjct: 467 LLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC-IRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 169 HVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKSTKDK 228
+V S I MYA G ++ A IL + DV+ W +I GY + + A F+ D+
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 585
Query: 229 NTGS---------------------------------------YNAMISGFARFGRFEEA 249
S NA+++ ++R G+ EE+
Sbjct: 586 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 645
Query: 250 RKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASL 309
F + D I W+A++ G+ + G +EAL VF M R+ I F + A +
Sbjct: 646 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET 705
Query: 310 GALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMI 369
+ QG +H + + + + AL+ MYAKCG + A K F ++ K +WNA+I
Sbjct: 706 ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAII 765
Query: 370 GGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGI 429
+ HG +A++ F +M +RP+ +T VLSAC+H G++D+G+ M YG+
Sbjct: 766 NAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGL 825
Query: 430 DPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGERLGK 489
P+ EHY C+VD+L RAG L+ A+E I MP++P+A VW LL AC H +E GE
Sbjct: 826 SPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAH 885
Query: 490 ILLEMEPQN--------------RRCDDVAKMRKLMKERGIKTNPGSSMIDVNGVIHEFR 535
LLE+EP++ ++ D R+ MKE+G+K PG S I+V IH F
Sbjct: 886 HLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFY 945
Query: 536 TGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVLFDIDEEEKETAPKYHSEKLAIAFG 595
GD +HP EI+ + + ++ GY + +L ++ E+K+ HSEKLAI+FG
Sbjct: 946 VGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFG 1005
Query: 596 FINTDPGATIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
++ I V+KNLRVC DCH+ K +SKV R+IIVRD R+HHF G CSC D+W
Sbjct: 1006 LLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 211/484 (43%), Gaps = 55/484 (11%)
Query: 49 LKQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRAC 108
++Q HA IL G V L+ ++ + F +LA +VF+ + + W +++
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGF--VDLARRVFDGLRLKDHSSWVAMISGL 263
Query: 109 LEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCGDV 168
++ I L+ +M + P + + +V AC E+ + G Q+H V+K G D
Sbjct: 264 SKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 323
Query: 169 HVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKST--- 225
+V ++ + +Y G + A I + S+ D + +N LI+G +CG E A ELFK
Sbjct: 324 YVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD 383
Query: 226 ---KDKNT-----------------------------GSYN----AMISGFARFGRFEEA 249
D NT S N A+++ +A+ E A
Sbjct: 384 GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA 443
Query: 250 RKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASL 309
F E ++ + W+ ++ Y + + +F +MQ ++I P ++ +L C L
Sbjct: 444 LDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL 503
Query: 310 GALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMI 369
G L+ G IH + + + ++A + + L+DMYAK G+LD AW + K+V +W MI
Sbjct: 504 GDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMI 563
Query: 370 GGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMY-- 427
G + D A+ F +M +R D + +SACA GLQAL QQ++
Sbjct: 564 AGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACA-------GLQALKEGQQIHAQ 616
Query: 428 ----GIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEF 483
G ++ +V L R G + E+ N A W AL+ ++ G E
Sbjct: 617 ACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVSGFQQSGNNEE 675
Query: 484 GERL 487
R+
Sbjct: 676 ALRV 679
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 182/435 (41%), Gaps = 94/435 (21%)
Query: 86 ALKVFNSVHKPNVFVWNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSI 145
A KVF+ + + +F WN +++ N V L+ MV + PN+ T+ V +AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-- 196
Query: 146 TEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNAL 205
G V VV+ Q++A +IL G + + N L
Sbjct: 197 -----RGGSVAFDVVE--------------QIHA---------RILYQGLRDSTVVCNPL 228
Query: 206 IDGYLKCGDIEGAKELFKSTKDKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWS 265
ID Y +R G + AR++F+ + KD +W
Sbjct: 229 IDLY-------------------------------SRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 266 AIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRN 325
A+I G +K+ EA+ +F +M I P + S VL+AC + +L+ G +H V +
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 326 SICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELF 385
D + ALV +Y G L A +F +M ++ T+N +I GL+ G + A+ELF
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377
Query: 386 FKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQM------------------- 426
+M + + PD T A ++ AC+ G + RG Q Y ++
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 437
Query: 427 --------YGIDPEVEH---YGCIVDLLGRAGYLAEAEEVISSMPME---PNAAVWEALL 472
Y ++ EVE+ + ++ G L + + M +E PN + ++L
Sbjct: 438 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 497
Query: 473 GACRKHGEVEFGERL 487
C + G++E GE++
Sbjct: 498 KTCIRLGDLELGEQI 512
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 121/283 (42%), Gaps = 39/283 (13%)
Query: 248 EARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACA 307
+ R +F + +++AI ++D ++E + + ++ I+P L +L C
Sbjct: 38 KTRTVFPTLCGTRRASFAAISVYISEDESFQE--KRIDSVENRGIRPNHQTLKWLLEGCL 95
Query: 308 SL-GALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWN 366
G+LD+G +H + + + + L L D Y G L A+KVF++M + +FTWN
Sbjct: 96 KTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWN 155
Query: 367 AMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQM 426
MI LA + LF +M E + P+ TF+ VL AC G + + + + +
Sbjct: 156 KMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-RGGSVAFDVVEQIHARIL 214
Query: 427 Y-GIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPME----------------------- 462
Y G+ ++DL R G++ A V + ++
Sbjct: 215 YQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIR 274
Query: 463 -----------PNAAVWEALLGACRKHGEVEFGERLGKILLEM 494
P + ++L AC+K +E GE+L ++L++
Sbjct: 275 LFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/634 (33%), Positives = 335/634 (52%), Gaps = 80/634 (12%)
Query: 38 LNTKCHTSWQHLKQAHAVILKSGHFQDHYVSG--TLVKCHANSRFSNFELALKVFNSVHK 95
L +CH + KQ HA +K F S L KC + ++ A +F +
Sbjct: 36 LLKRCH-NIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDD 94
Query: 96 PNVFVWNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQV 155
P F +N+++R + + Y+EM+ ++P+ FTYP + KAC+ ++ +E
Sbjct: 95 PCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIRE---- 150
Query: 156 HAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDI 215
G Q++ Q+ G ++DV N+LI+ Y +C
Sbjct: 151 ------------------GKQIHG---------QVFKLGLEADVFVQNSLINMYGRC--- 180
Query: 216 EGAKELFKSTKDKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDG 275
G E + +F ++ K +WS+++ G
Sbjct: 181 ----------------------------GEMELSSAVFEKLESKTAASWSSMVSARAGMG 212
Query: 276 YYKEALEVFNEM-QRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLG 334
+ E L +F M +K + + L ACA+ GAL+ G+ IH + RN ++ ++
Sbjct: 213 MWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQ 272
Query: 335 TALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMR 394
T+LVDMY KCG LD A +F+ M+ + T++AMI GLA+HG + A+ +F KM +E +
Sbjct: 273 TSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLE 332
Query: 395 PDRITFACVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEE 454
PD + + VL+AC+H+G++ G + M + ++P EHYGC+VDLLGRAG L EA E
Sbjct: 333 PDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALE 392
Query: 455 VISSMPMEPNAAVWEALLGACRKHGEVEFGERLGKILLEMEPQN--------------RR 500
I S+P+E N +W L CR +E G+ + LL++ N +
Sbjct: 393 TIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQM 452
Query: 501 CDDVAKMRKLMKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKM 560
DDVA+ R + +G+K PG S++++ G H F + D SHP+ KEIY ML ++ +LK
Sbjct: 453 WDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKF 512
Query: 561 EGYSPNSSQVLFDIDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSA 620
EGYSP+ +Q+L ++DEEEK+ K HS+K+AIAFG + T PG+ I++ +NLR+C DCH+
Sbjct: 513 EGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTY 572
Query: 621 TKLISKVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
TK IS +++R+I+VRDR R+H F+ G CSC D+W
Sbjct: 573 TKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/626 (33%), Positives = 333/626 (53%), Gaps = 83/626 (13%)
Query: 47 QHLKQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLR 106
+ L+Q HA ++ +G+ + + L+ ++R + L F SV P+ F++NSV++
Sbjct: 23 KQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLL--FLSVPLPDDFLFNSVIK 80
Query: 107 ACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCG 166
+ + P ++ Y M+ + P+ +T+ +V K+C+ A + G VH H V +G
Sbjct: 81 STSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGL 140
Query: 167 DVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKSTK 226
D +V++ AL+ Y KCGD+EGA
Sbjct: 141 DTYVQA-------------------------------ALVTFYSKCGDMEGA-------- 161
Query: 227 DKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNE 286
R++F+ M +K + W++++ G+ ++G EA++VF +
Sbjct: 162 -----------------------RQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQ 198
Query: 287 MQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGR 346
M+ +P +L+ACA GA+ G W+H ++ + ++ LGTAL+++Y++CG
Sbjct: 199 MRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGD 258
Query: 347 LDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQRE-KMRPDRITFACVLS 405
+ A +VF+ MK V W AMI HG A+ELF KM+ + P+ +TF VLS
Sbjct: 259 VGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLS 318
Query: 406 ACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNA 465
ACAHAG+++ G M + Y + P VEH+ C+VD+LGRAG+L EA + I + A
Sbjct: 319 ACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKA 378
Query: 466 ---AVWEALLGACRKHGEVEFGERLGKILLEMEPQNR--------------RCDDVAKMR 508
A+W A+LGAC+ H + G + K L+ +EP N + D+V+ +R
Sbjct: 379 TAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIR 438
Query: 509 KLMKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKMEGYSPNSS 568
M ++ G S+I+V + F GD SH + EIY L+ +I + K GY+P S
Sbjct: 439 DGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSE 498
Query: 569 QVLFDIDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLISKVF 628
+V+ ++EEEKE A +YHSEKLA+AFG + T A I ++KNLR+CEDCHSA K IS V
Sbjct: 499 EVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVDVA-ITIVKNLRICEDCHSAFKYISIVS 557
Query: 629 KRDIIVRDRVRYHHFRNGKCSCNDFW 654
R I VRD++R+HHF+NG CSC D+W
Sbjct: 558 NRQITVRDKLRFHHFQNGSCSCLDYW 583
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/656 (32%), Positives = 353/656 (53%), Gaps = 54/656 (8%)
Query: 51 QAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRACLE 110
Q H V++K+G + VS +L+ + + N A +F+ +V WNS++
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYL--KCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 111 HNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCGDVHV 170
+ + ++ M + ++ ++ +V K C+ + + Q+H VVK G D ++
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 171 KSSGIQMYA-CFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKSTKDK- 228
+++ + Y+ C ++ R + G +V+ W A+I G+L+ E A +LF K K
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 229 ---NTGSYN-------------------------------AMISGFARFGRFEEARKLFN 254
N +Y+ A++ + + G+ EEA K+F+
Sbjct: 393 VRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS 452
Query: 255 EMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGA-LD 313
++DKD + WSA++ GY + G + A+++F E+ + IKP +F S +L CA+ A +
Sbjct: 453 GIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMG 512
Query: 314 QGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLA 373
QG H ++ + + +AL+ MYAK G ++ A +VF+ + K++ +WN+MI G A
Sbjct: 513 QGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYA 572
Query: 374 MHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGIDPEV 433
HG+A A+++F +M++ K++ D +TF V +AC HAG+++ G + M + I P
Sbjct: 573 QHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTK 632
Query: 434 EHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGERLGKILLE 493
EH C+VDL RAG L +A +VI +MP + +W +L ACR H + E G + ++
Sbjct: 633 EHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIA 692
Query: 494 MEPQNRRC--------------DDVAKMRKLMKERGIKTNPGSSMIDVNGVIHEFRTGDG 539
M+P++ + AK+RKLM ER +K PG S I+V + F GD
Sbjct: 693 MKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDR 752
Query: 540 SHPQVKEIYLMLKKIIEKLKMEGYSPNSSQVLFDIDEEEKETAPKYHSEKLAIAFGFINT 599
SHP +IY+ L+ + +LK GY P++S VL DID+E KE HSE+LAIAFG I T
Sbjct: 753 SHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIAT 812
Query: 600 DPGATIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYHHF-RNGKCSCNDFW 654
G+ + +IKNLRVC DCH KLI+K+ +R+I+VRD R+HHF +G CSC DFW
Sbjct: 813 PKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 231/497 (46%), Gaps = 67/497 (13%)
Query: 33 TILDILNTKCHTSWQHLKQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNS 92
++L + T C + +Q H +K G D V +LV + SNF+ KVF+
Sbjct: 98 SVLKVSATLCDELFG--RQLHCQCIKFGFLDDVSVGTSLVDTYMKG--SNFKDGRKVFDE 153
Query: 93 VHKPNVFVWNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEG 152
+ + NV W +++ ++ V++L+ M ++PN FT+ + G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 153 VQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKC 212
+QVH VVKNGL + V +S I +Y G V KAR + D V+ WN++I GY
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 213 G-DIEGAKELFKSTK-----------------------------------------DKNT 230
G D+E A +F S + D+N
Sbjct: 274 GLDLE-ALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 231 GSYNAMISGFARFGRFEEARKLFNEMN-DKDEITWSAIIDGYTKDGYYKEALEVFNEMQR 289
+ A++ +++ +A +LF E+ + ++W+A+I G+ ++ +EA+++F+EM+R
Sbjct: 333 RT--ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR 390
Query: 290 DKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDM 349
++P +F S +L A + + +H V + + + +GTAL+D Y K G+++
Sbjct: 391 KGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEE 446
Query: 350 AWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAH 409
A KVF + K++ W+AM+ G A G + AI++F ++ + ++P+ TF+ +L+ CA
Sbjct: 447 AAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAA 506
Query: 410 AGMIDRGLQALTYMQQMYG------IDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEP 463
++ +Q +G +D + ++ + + G + AEEV E
Sbjct: 507 TN------ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ-REK 559
Query: 464 NAAVWEALLGACRKHGE 480
+ W +++ +HG+
Sbjct: 560 DLVSWNSMISGYAQHGQ 576
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 168/373 (45%), Gaps = 49/373 (13%)
Query: 50 KQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVH-KPNVFVWNSVLRAC 108
+Q H ++K G D + L+ + S+ + AL++F + NV W +++
Sbjct: 315 EQLHCSVVKYGFLFDQNIRTALMVAY--SKCTAMLDALRLFKEIGCVGNVVSWTAMISGF 372
Query: 109 LEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCGDV 168
L+++ + L+SEM +PN+FTY + A + +VHA VVK
Sbjct: 373 LQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPS----EVHAQVVKTNYERSS 428
Query: 169 HVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELF------ 222
V ++ + Y G V +A ++ D++ W+A++ GY + G+ E A ++F
Sbjct: 429 TVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKG 488
Query: 223 ----------------------------------KSTKDKNTGSYNAMISGFARFGRFEE 248
KS D + +A+++ +A+ G E
Sbjct: 489 GIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIES 548
Query: 249 ARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACAS 308
A ++F +KD ++W+++I GY + G +AL+VF EM++ K+K V AAC
Sbjct: 549 AEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTH 608
Query: 309 LGALDQGIWIHDHVKRN-SICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFT-WN 366
G +++G D + R+ I + +VD+Y++ G+L+ A KV E+M T W
Sbjct: 609 AGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWR 668
Query: 367 AMIGGLAMHGRAD 379
++ +H + +
Sbjct: 669 TILAACRVHKKTE 681
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 115/241 (47%), Gaps = 2/241 (0%)
Query: 239 GFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFV 298
G R A LF++ +D ++ +++ G+++DG +EA +F + R ++ +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 299 LSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMK 358
S VL A+L G +H + D +GT+LVD Y K KVF++MK
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 359 MKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQ 418
+ V TW +I G A + D+ + LF +MQ E +P+ TFA L A G+ RGLQ
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 419 ALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKH 478
T + + G+D + +++L + G + +A + ++ + W +++ +
Sbjct: 216 VHTVVVK-NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISGYAAN 273
Query: 479 G 479
G
Sbjct: 274 G 274
Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 134/299 (44%), Gaps = 21/299 (7%)
Query: 18 EISATNIPTSEFSQKTILDILNTKCHTSWQHLKQAHAVILKSGHFQDHYVSGTLVKCHAN 77
E+ + +EF+ IL L + + HA ++K+ + + V L+ +
Sbjct: 387 EMKRKGVRPNEFTYSVILTALPVISPS------EVHAQVVKTNYERSSTVGTALLDAYV- 439
Query: 78 SRFSNFELALKVFNSVHKPNVFVWNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYP 137
+ E A KVF+ + ++ W+++L + E I ++ E+ KPN+FT+
Sbjct: 440 -KLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFS 498
Query: 138 TVFKACSITEADK-EGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSK 196
++ C+ T A +G Q H +K+ L + V S+ + MYA G + A ++ +
Sbjct: 499 SILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQRE 558
Query: 197 SDVICWNALIDGYLKCGDIEGAKELFKSTKDKNTG----SYNAMISGFARFGRFEEARKL 252
D++ WN++I GY + G A ++FK K + ++ + + G EE K
Sbjct: 559 KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKY 618
Query: 253 FNEMNDKDEITW-----SAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAAC 306
F+ M +I S ++D Y++ G ++A++V M + +LAAC
Sbjct: 619 FDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPN---PAGSTIWRTILAAC 674
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/665 (33%), Positives = 346/665 (52%), Gaps = 63/665 (9%)
Query: 51 QAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRACLE 110
Q H +LKSG + S L+ + R +A KVF+S+ + NV W++++ +
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCR--EPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 111 HNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCGDVHV 170
+ + +SL+SEM PN+FT+ T KAC + A ++G+Q+H +K G V V
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144
Query: 171 KSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKSTKDKN- 229
+S + MY+ G +N+A ++ +I WNA+I G++ G A + F ++ N
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI 204
Query: 230 ------------------TG-------------------SYNAMISG-----FARFGRFE 247
TG +A I+G + + G
Sbjct: 205 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLF 264
Query: 248 EARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACA 307
ARK F+++ +K I+WS++I GY ++G + EA+ +F +Q + F LS ++ A
Sbjct: 265 SARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFA 324
Query: 308 SLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNA 367
L QG + + ++ + ++VDMY KCG +D A K F +M++K+V +W
Sbjct: 325 DFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTV 384
Query: 368 MIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMY 427
+I G HG ++ +F++M R + PD + + VLSAC+H+GMI G + + + + +
Sbjct: 385 VITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETH 444
Query: 428 GIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGERL 487
GI P VEHY C+VDLLGRAG L EA+ +I +MP++PN +W+ LL CR HG++E G+ +
Sbjct: 445 GIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEV 504
Query: 488 GKILLEMEPQNRR--------------CDDVAKMRKLMKERGIKTNPGSSMIDVNGVIHE 533
GKILL ++ +N ++ R+L +G+K G S +++ +H
Sbjct: 505 GKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHF 564
Query: 534 FRTGDGSHPQVKEIYLMLKKIIEKLKME-GYSPNSSQVLFDIDEEEKETAPKYHSEKLAI 592
FR+G+ SHP I LK+ +L+ E GY L DID+E KE + HSEKLAI
Sbjct: 565 FRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAI 624
Query: 593 AFGFIN---TDPGATIRVIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYHHFRNGKCS 649
G TIRV KNLRVC DCH K +SK+ K +VRD VR+H F +G CS
Sbjct: 625 GLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCS 684
Query: 650 CNDFW 654
C D+W
Sbjct: 685 CGDYW 689
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 199/418 (47%), Gaps = 52/418 (12%)
Query: 138 TVFKACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKS 197
++ + C+ +G QVH +++K+G ++ + I MY A ++ D +
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 198 DVICWNALIDGYLKCGDIEGAKELFK--------------STKDKNTGSYNAMISG---- 239
+V+ W+AL+ G++ GD++G+ LF ST K G NA+ G
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130
Query: 240 ---------------------FARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYK 278
+++ GR EA K+F + D+ I+W+A+I G+ GY
Sbjct: 131 GFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGS 190
Query: 279 EALEVFNEMQRDKIK--PRKFVLSCVLAACASLGALDQGIWIHDHVKRNSI-C-VDAVLG 334
+AL+ F MQ IK P +F L+ +L AC+S G + G IH + R+ C A +
Sbjct: 191 KALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATIT 250
Query: 335 TALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMR 394
+LVD+Y KCG L A K F+ +K K + +W+++I G A G +A+ LF ++Q +
Sbjct: 251 GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQ 310
Query: 395 PDRITFACVLSACAHAGMIDRG--LQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEA 452
D + ++ A ++ +G +QAL ++ G++ V +VD+ + G + EA
Sbjct: 311 IDSFALSSIIGVFADFALLRQGKQMQALA-VKLPSGLETSV--LNSVVDMYLKCGLVDEA 367
Query: 453 EEVISSMPMEPNAAVWEALLGACRKHGEVEFGERLGKILLEMEPQNRRCDDVAKMRKL 510
E+ + M ++ + W ++ KHG G++ +I EM N D+V + L
Sbjct: 368 EKCFAEMQLK-DVISWTVVITGYGKHG---LGKKSVRIFYEMLRHNIEPDEVCYLAVL 421
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 94/176 (53%), Gaps = 2/176 (1%)
Query: 299 LSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMK 358
L +L C G DQG +H ++ ++ ++ + L+DMY KC MA+KVF+ M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 359 MKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQ 418
+ V +W+A++ G ++G ++ LF +M R+ + P+ TF+ L AC +++GLQ
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 419 ALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGA 474
+ ++ G + VE +VD+ + G + EAE+V + ++ + W A++
Sbjct: 129 IHGFCLKI-GFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMIAG 182
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/626 (34%), Positives = 339/626 (54%), Gaps = 57/626 (9%)
Query: 50 KQAHAVILKSGHFQDHYVSGTLV----KCHANSRFSNFELALKVFNSVHKPNVFVWNSVL 105
K HA I+K G Q ++ TLV KC A S AL+VF+ + + W SVL
Sbjct: 23 KALHAHIVKLGIVQCCPLANTLVNVYGKCGAASH------ALQVFDEMPHRDHIAWASVL 76
Query: 106 RACLEHNEPWRVISLYSEMVGVDS-KPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGL 164
A + N + +S++S + +P+ F + + KAC+ + G QVH H + +
Sbjct: 77 TALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEY 136
Query: 165 CGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKS 224
D VKSS + MYA G +N A+ + D + I W A++ GY K G E A ELF+
Sbjct: 137 ANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRI 196
Query: 225 TKDKNTGSYNAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVF 284
KN S+ A+ISGF + G+ EA +F EM +E +++
Sbjct: 197 LPVKNLYSWTALISGFVQSGKGLEAFSVFTEMR--------------------RERVDIL 236
Query: 285 NEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKC 344
+ + VLS ++ ACA+L A G +H V + AL+DMYAKC
Sbjct: 237 DPL----------VLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKC 286
Query: 345 GRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVL 404
+ A +F M+ ++V +W ++I G+A HG+A+ A+ L+ M ++P+ +TF ++
Sbjct: 287 SDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLI 346
Query: 405 SACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPN 464
AC+H G +++G + M + YGI P ++HY C++DLLGR+G L EAE +I +MP P+
Sbjct: 347 YACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPD 406
Query: 465 AAVWEALLGACRKHGEVEFGERLGK---------------ILLEMEPQNRRCDDVAKMRK 509
W ALL AC++ G + G R+ +L + V++ R+
Sbjct: 407 EPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARR 466
Query: 510 LMKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKME-GYSPNSS 568
+ E ++ +PG S ++V F G+ SHP ++I+ +LKK+ E++++ GY P++S
Sbjct: 467 KLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTS 526
Query: 569 QVLFDIDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSATKLISKVF 628
+L D+DE+EKE +HSE+ A+A+G + PG IR++KNLRVC DCH K IS++
Sbjct: 527 WILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEIT 586
Query: 629 KRDIIVRDRVRYHHFRNGKCSCNDFW 654
+R+IIVRD RYHHF+ GKCSCNDFW
Sbjct: 587 EREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 5/191 (2%)
Query: 303 LAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEV 362
L CA L +H H+ + I L LV++Y KCG A +VF++M ++
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 363 FTWNAMIGGLAMHGRADDAI-ELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQA-L 420
W +++ L + + +RPD F+ ++ ACA+ G ID G Q
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 421 TYMQQMYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGE 480
++ Y D V+ +VD+ + G L A+ V S+ ++ N W A++ K G
Sbjct: 130 HFIVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYAKSGR 186
Query: 481 VEFGERLGKIL 491
E L +IL
Sbjct: 187 KEEALELFRIL 197
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/588 (35%), Positives = 319/588 (54%), Gaps = 63/588 (10%)
Query: 128 DSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKA 187
+S P++ TY + C + + ++VH H++ NG D + + I MY+ G V+ A
Sbjct: 72 ESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYA 131
Query: 188 RQILDDGSKSDVICWNALIDGYLKCGDIEGAKELF------KSTKDKNTGSY-------- 233
R++ D K + WNAL G E L+ D+ T +Y
Sbjct: 132 RKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVAS 191
Query: 234 ----NAMISG-------------------------FARFGRFEEARKLFNEMNDKDEITW 264
N ++ G +ARFG + A +F M ++ ++W
Sbjct: 192 ECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSW 251
Query: 265 SAIIDGYTKDGYYKEALEVFNEMQRDK--IKPRKFVLSCVLAACASLGALDQGIWIHDHV 322
SA+I Y K+G EAL F EM R+ P + VL ACASL AL+QG IH ++
Sbjct: 252 SAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYI 311
Query: 323 KRNSICVDAVLG--TALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADD 380
R + D++L +ALV MY +CG+L++ +VF+ M ++V +WN++I +HG
Sbjct: 312 LRRGL--DSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKK 369
Query: 381 AIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIV 440
AI++F +M P +TF VL AC+H G+++ G + M + +GI P++EHY C+V
Sbjct: 370 AIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMV 429
Query: 441 DLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGERLGKILLEMEPQN-- 498
DLLGRA L EA +++ M EP VW +LLG+CR HG VE ER + L +EP+N
Sbjct: 430 DLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAG 489
Query: 499 ------------RRCDDVAKMRKLMKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKE 546
+ D+V +++KL++ RG++ PG ++V ++ F + D +P +++
Sbjct: 490 NYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQ 549
Query: 547 IYLMLKKIIEKLKMEGYSPNSSQVLFDIDEEEKETAPKYHSEKLAIAFGFINTDPGATIR 606
I+ L K+ E +K +GY P + VL++++ EEKE HSEKLA+AFG INT G IR
Sbjct: 550 IHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIR 609
Query: 607 VIKNLRVCEDCHSATKLISKVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
+ KNLR+CEDCH TK ISK +++I+VRD R+H F+NG CSC D+W
Sbjct: 610 ITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 193/403 (47%), Gaps = 50/403 (12%)
Query: 27 SEFSQKTI-LDILNTKCHTSWQHLKQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFEL 85
S SQ+T L IL +S + H IL +G QD +++ L+ +++ + +
Sbjct: 73 SSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSD--LGSVDY 130
Query: 86 ALKVFNSVHKPNVFVWNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSI 145
A KVF+ K ++VWN++ RA V+ LY +M + + ++FTY V KAC
Sbjct: 131 ARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVA 190
Query: 146 TEAD----KEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGSKSDVIC 201
+E +G ++HAH+ + G V++ ++ + MYA FGCV+ A + +V+
Sbjct: 191 SECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVS 250
Query: 202 WNALIDGYLKCGD----IEGAKELFKSTKDKNTGSY------------------------ 233
W+A+I Y K G + +E+ + TKD + S
Sbjct: 251 WSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGY 310
Query: 234 -------------NAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGYYKEA 280
+A+++ + R G+ E +++F+ M+D+D ++W+++I Y GY K+A
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKA 370
Query: 281 LEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTA-LVD 339
+++F EM + P VL AC+ G +++G + + + R+ + A +VD
Sbjct: 371 IQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVD 430
Query: 340 MYAKCGRLDMAWKVFEDMKMKE-VFTWNAMIGGLAMHGRADDA 381
+ + RLD A K+ +DM+ + W +++G +HG + A
Sbjct: 431 LLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 104/235 (44%), Gaps = 32/235 (13%)
Query: 261 EITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHD 320
+I+ + +I K+G K+A+ V ++ + + ++ C C +L + +H
Sbjct: 46 KISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILC----CGHRSSLSDALRVHR 101
Query: 321 HVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADD 380
H+ N D L T L+ MY+ G +D A KVF+ + + ++ WNA+ L + G ++
Sbjct: 102 HILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEE 161
Query: 381 AIELFFKMQREKMRPDRITFACVLSACA---------------HAGMIDRGLQALTYMQQ 425
+ L++KM R + DR T+ VL AC HA + RG + Y+
Sbjct: 162 VLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMT 221
Query: 426 MYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGE 480
+VD+ R G + A V MP+ N W A++ K+G+
Sbjct: 222 ------------TLVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMIACYAKNGK 263
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/574 (35%), Positives = 313/574 (54%), Gaps = 55/574 (9%)
Query: 136 YPTVFKACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKARQILDDGS 195
Y + AC A ++G +VHAH++K ++++ + Y C+ AR++LD+
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 196 KSDVICWNALIDGYLKCGDIEGA----KELFKSTKDKNTGSY------------------ 233
+ +V+ W A+I Y + G A E+ +S N ++
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 234 -----------------NAMISGFARFGRFEEARKLFNEMNDKDEITWSAIIDGYTKDGY 276
++++ +A+ G+ +EAR++F + ++D ++ +AII GY + G
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 277 YKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICVDAVLGTA 336
+EALE+F+ + + + P + +L A + L LD G H HV R + AVL +
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 294
Query: 337 LVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQREK-MRP 395
L+DMY+KCG L A ++F++M + +WNAM+ G + HG + +ELF M+ EK ++P
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 354
Query: 396 DRITFACVLSACAHAGMIDRGLQALTYM-QQMYGIDPEVEHYGCIVDLLGRAGYLAEAEE 454
D +T VLS C+H M D GL M YG P EHYGCIVD+LGRAG + EA E
Sbjct: 355 DAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFE 414
Query: 455 VISSMPMEPNAAVWEALLGACRKHGEVEFGERLGKILLEMEPQNR--------------R 500
I MP +P A V +LLGACR H V+ GE +G+ L+E+EP+N R
Sbjct: 415 FIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGR 474
Query: 501 CDDVAKMRKLMKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKIIEKLKM 560
DV +R +M ++ + PG S I +H F D +HP+ +E+ +K+I K+K
Sbjct: 475 WADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQ 534
Query: 561 EGYSPNSSQVLFDIDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCEDCHSA 620
GY P+ S VL+D+DEE+KE HSEKLA+ FG I T G IRV KNLR+C DCH+
Sbjct: 535 AGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNF 594
Query: 621 TKLISKVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
K+ SKVF+R++ +RD+ R+H +G CSC D+W
Sbjct: 595 AKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 170/375 (45%), Gaps = 49/375 (13%)
Query: 50 KQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRACL 109
++ HA ++K+ + Y+ L+ + + E A KV + + + NV W +++
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYG--KCDCLEDARKVLDEMPEKNVVSWTAMISRYS 129
Query: 110 EHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCGDVH 169
+ +++++EM+ D KPN+FT+ TV +C G Q+H +VK +
Sbjct: 130 QTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIF 189
Query: 170 VKSSGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKSTKDK- 228
V SS + MYA G + +AR+I + + DV+ A+I GY + G E A E+F +
Sbjct: 190 VGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEG 249
Query: 229 ---NTGSY-----------------------------------NAMISGFARFGRFEEAR 250
N +Y N++I +++ G AR
Sbjct: 250 MSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAR 309
Query: 251 KLFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDK-IKPRKFVLSCVLAACASL 309
+LF+ M ++ I+W+A++ GY+K G +E LE+F M+ +K +KP L VL+ C+
Sbjct: 310 RLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHG 369
Query: 310 GALDQGIWIHDHVKRNSICVDAVLGT----ALVDMYAKCGRLDMAWKVFEDMKMKEVF-T 364
D G+ I D + GT +VDM + GR+D A++ + M K
Sbjct: 370 RMEDTGLNIFDGMVAGEYGTKP--GTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGV 427
Query: 365 WNAMIGGLAMHGRAD 379
+++G +H D
Sbjct: 428 LGSLLGACRVHLSVD 442
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 378 bits (970), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/699 (30%), Positives = 368/699 (52%), Gaps = 71/699 (10%)
Query: 21 ATNIPTSE---FSQKTILDILNTKCHTSWQHLKQ---AHAVIL-KSGHFQDHYVSGTL-- 71
A+ +P S+ F + ++L ++S+ + + AH ++ +S +D Y +L
Sbjct: 18 ASLVPKSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLIN 77
Query: 72 --VKCHANSRFSNFELALKVFNSVHKPNVFVWNSVLRACLEHNEPWRVISLYSEMV-GVD 128
VKC R A K+F+ + + NV W ++++ + V+ L+ M +
Sbjct: 78 LYVKCRETVR------ARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGE 131
Query: 129 SKPNKFTYPTVFKACSITEADKEGVQVHAHVVKNGLCGDVHVKSSGIQMYACFGCVNKAR 188
S+PN+F VFK+CS + +EG Q H +K GL V+++ + MY+ +A
Sbjct: 132 SRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAI 191
Query: 189 QILDDGSKSDVICWNALIDGYLKCGDIE----------------------GAKELFKSTK 226
++LDD D+ +++ + GYL+CG + + LF + +
Sbjct: 192 RVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLR 251
Query: 227 DKNTG----------SYNA-------MISGFARFGRFEEARKLFNEMNDKDEITWSAIID 269
D N +NA +I+ + + G+ A+++F++ + ++ + I+D
Sbjct: 252 DLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMD 311
Query: 270 GYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGALDQGIWIHDHVKRNSICV 329
Y +D ++EAL +F++M ++ P ++ + +L + A L L QG +H V ++
Sbjct: 312 AYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRN 371
Query: 330 DAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGGLAMHGRADDAIELFFKMQ 389
++G ALV+MYAK G ++ A K F M +++ TWN MI G + HG +A+E F +M
Sbjct: 372 HVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMI 431
Query: 390 REKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGIDPEVEHYGCIVDLLGRAGYL 449
P+RITF VL AC+H G +++GL + + + + P+++HY CIV LL +AG
Sbjct: 432 FTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMF 491
Query: 450 AEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGERLGKILLEMEP------------- 496
+AE+ + + P+E + W LL AC G+++ + +E P
Sbjct: 492 KDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIH 551
Query: 497 -QNRRCDDVAKMRKLMKERGIKTNPGSSMIDVNGVIHEFRTGDGSHPQVKEIYLMLKKII 555
++R + VAK+R LM RG+K PG S I + H F D HP++ IY +K+++
Sbjct: 552 AKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVM 611
Query: 556 EKLKMEGYSPNSSQVLFDIDEEEKETAPKYHSEKLAIAFGFINTDPGATIRVIKNLRVCE 615
K+K GYSP+ + D+DEE++E YHSEKLA+A+G I T + + V KN+R+C+
Sbjct: 612 SKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICD 671
Query: 616 DCHSATKLISKVFKRDIIVRDRVRYHHFRNGKCSCNDFW 654
DCHSA KLISK+ KR I++RD R+HHF +G+CSC D+W
Sbjct: 672 DCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/429 (20%), Positives = 176/429 (41%), Gaps = 53/429 (12%)
Query: 121 YSEMVGVDSKPNKFTYPT-----VFKACSITEADKEGVQVHAHVV---KNGLCGDVHVKS 172
+ ++ + K K +P + K C+ + + G +HAH++ ++ D + +
Sbjct: 14 WDKLASLVPKSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQIN 73
Query: 173 SGIQMYACFGCVNKARQILDDGSKSDVICWNALIDGYLKCG-DIEGAKELFKSTKDKNTG 231
S I +Y +AR++ D + +V+ W A++ GY G D E K LFKS
Sbjct: 74 SLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLK-LFKSMFFSGES 132
Query: 232 SYNAMISGF-----ARFGRFEEAR-----------------------------------K 251
N ++ + GR EE + +
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIR 192
Query: 252 LFNEMNDKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAACASLGA 311
+ +++ D +S+ + GY + G +KE L+V + + L ++L
Sbjct: 193 VLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRD 252
Query: 312 LDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTWNAMIGG 371
L+ + +H + R + AL++MY KCG++ A +VF+D + +F ++
Sbjct: 253 LNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDA 312
Query: 372 LAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQMYGIDP 431
++A+ LF KM +++ P+ TFA +L++ A ++ +G L + G
Sbjct: 313 YFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG-DLLHGLVLKSGYRN 371
Query: 432 EVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHG-EVEFGERLGKI 490
V +V++ ++G + +A + S M + W ++ C HG E E ++
Sbjct: 372 HVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHGLGREALEAFDRM 430
Query: 491 LLEMEPQNR 499
+ E NR
Sbjct: 431 IFTGEIPNR 439
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/569 (36%), Positives = 323/569 (56%), Gaps = 60/569 (10%)
Query: 41 KCHTSWQHLKQAHAVILKSGHFQDHYVSGTLVKCHANSRFSNFELALKVFNSVHKPNVFV 100
KC + +KQ HA I++ +D +++ L+ + R +N LA++VFN V +PNV +
Sbjct: 28 KC-ANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTN--LAVRVFNQVQEPNVHL 84
Query: 101 WNSVLRACLEHNEPWRVISLYSEMVGVDSKPNKFTYPTVFKACSITEADKEGVQVHAHVV 160
NS++RA ++++P++ ++SEM + FTYP + KACS +H H+
Sbjct: 85 CNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIE 144
Query: 161 KNGLCGDVHVKSSGIQMYA-CFGC--------------------------------VNKA 187
K GL D++V ++ I Y+ C G + A
Sbjct: 145 KLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDA 204
Query: 188 RQILDDGSKSDVICWNALIDGYLKCGDIEGAKELFKSTKDKNTGSYNAMISGFARFGRFE 247
R++ D+ + D+I WN ++DGY +C ++ A ELF+ ++NT S++ M+ G+++ G E
Sbjct: 205 RRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDME 264
Query: 248 EARKLFNEMN--DKDEITWSAIIDGYTKDGYYKEALEVFNEMQRDKIKPRKFVLSCVLAA 305
AR +F++M K+ +TW+ II GY + G KEA + ++M +K + +LAA
Sbjct: 265 MARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAA 324
Query: 306 CASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEVFTW 365
C G L G+ IH +KR+++ +A + AL+DMYAKCG L A+ VF D+ K++ +W
Sbjct: 325 CTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSW 384
Query: 366 NAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTYMQQ 425
N M+ GL +HG +AIELF +M+RE +RPD++TF VL +C HAG+ID G+ M++
Sbjct: 385 NTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEK 444
Query: 426 MYGIDPEVEHYGCIVDLLGRAGYLAEAEEVISSMPMEPNAAVWEALLGACRKHGEVEFGE 485
+Y + P+VEHYGC+VDLLGR G L EA +V+ +MPMEPN +W ALLGACR H EV+ +
Sbjct: 445 VYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAK 504
Query: 486 RLGKILLEMEPQNRRCDD------------------VAKMRKLMKERGIKTNPGSSMIDV 527
+ L++++P CD VA +R MK G++ G+S +++
Sbjct: 505 EVLDNLVKLDP----CDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVEL 560
Query: 528 NGVIHEFRTGDGSHPQVKEIYLMLKKIIE 556
IHEF D SHP+ +IY ML +IE
Sbjct: 561 EDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 86/187 (45%), Gaps = 7/187 (3%)
Query: 303 LAACASLGALDQGIWIHDHVKRNSICVDAVLGTALVDMYAKCGRLDMAWKVFEDMKMKEV 362
L CA+L + Q +H + R ++ D + L+ + C + ++A +VF ++ V
Sbjct: 26 LPKCANLNQVKQ---LHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 363 FTWNAMIGGLAMHGRADDAIELFFKMQREKMRPDRITFACVLSACAHAGMIDRGLQALTY 422
N++I A + + A +F +MQR + D T+ +L AC+ + +
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 423 MQQMYGIDPEVEHYGCIVDLLGRAGYLA--EAEEVISSMPMEPNAAVWEALLGACRKHGE 480
++++ G+ ++ ++D R G L +A ++ M E + W ++LG K GE
Sbjct: 143 IEKL-GLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSMLGGLVKAGE 200
Query: 481 VEFGERL 487
+ RL
Sbjct: 201 LRDARRL 207
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 250,633,901
Number of Sequences: 539616
Number of extensions: 10744833
Number of successful extensions: 36131
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 103
Number of HSP's that attempted gapping in prelim test: 26042
Number of HSP's gapped (non-prelim): 2579
length of query: 654
length of database: 191,569,459
effective HSP length: 124
effective length of query: 530
effective length of database: 124,657,075
effective search space: 66068249750
effective search space used: 66068249750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)