Query 006252
Match_columns 654
No_of_seqs 229 out of 1284
Neff 5.3
Searched_HMMs 46136
Date Thu Mar 28 20:34:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006252.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006252hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0626 Beta-glucosidase, lact 100.0 7E-104 1E-108 861.0 35.7 384 165-554 62-512 (524)
2 PRK13511 6-phospho-beta-galact 100.0 3.3E-98 7E-103 827.1 35.0 365 165-553 30-468 (469)
3 PLN02849 beta-glucosidase 100.0 3.1E-98 7E-103 831.6 34.1 378 165-553 55-485 (503)
4 TIGR01233 lacG 6-phospho-beta- 100.0 8.2E-98 2E-102 823.1 35.5 366 165-554 29-467 (467)
5 PLN02814 beta-glucosidase 100.0 6.3E-98 1E-102 829.3 34.5 378 165-555 53-487 (504)
6 PLN02998 beta-glucosidase 100.0 6.6E-98 1E-102 827.9 33.7 377 165-551 56-488 (497)
7 PRK09593 arb 6-phospho-beta-gl 100.0 3.4E-96 7E-101 812.1 35.6 370 165-554 31-476 (478)
8 PF00232 Glyco_hydro_1: Glycos 100.0 3.2E-97 7E-102 816.6 23.3 370 165-553 30-455 (455)
9 PRK09589 celA 6-phospho-beta-g 100.0 2.5E-95 5E-100 804.8 36.5 369 165-553 29-474 (476)
10 COG2723 BglB Beta-glucosidase/ 100.0 1E-95 2E-100 791.5 32.1 368 165-552 29-454 (460)
11 PRK15014 6-phospho-beta-glucos 100.0 6.6E-94 1.4E-98 793.3 38.0 369 165-553 31-475 (477)
12 PRK09852 cryptic 6-phospho-bet 100.0 2.2E-93 4.7E-98 788.4 36.3 371 164-554 28-472 (474)
13 TIGR03356 BGL beta-galactosida 100.0 1.1E-90 2.3E-95 759.5 32.9 359 165-544 26-427 (427)
14 smart00633 Glyco_10 Glycosyl h 99.6 1.8E-14 4E-19 148.1 22.2 248 214-543 1-253 (254)
15 PF00150 Cellulase: Cellulase 99.5 7.3E-13 1.6E-17 134.8 22.7 254 194-510 22-279 (281)
16 PF02449 Glyco_hydro_42: Beta- 99.3 5.2E-10 1.1E-14 121.2 21.6 114 184-308 3-140 (374)
17 PF07745 Glyco_hydro_53: Glyco 99.1 9.1E-09 2E-13 110.5 23.0 238 197-509 28-297 (332)
18 PRK10150 beta-D-glucuronidase; 99.1 1.7E-08 3.6E-13 116.1 26.4 251 194-550 314-594 (604)
19 PF00331 Glyco_hydro_10: Glyco 99.0 1.3E-08 2.8E-13 108.8 16.7 264 206-546 34-318 (320)
20 PF01229 Glyco_hydro_39: Glyco 98.9 6.7E-08 1.4E-12 108.7 19.5 288 194-549 40-361 (486)
21 COG3693 XynA Beta-1,4-xylanase 98.7 1.5E-06 3.2E-11 92.2 19.4 263 214-550 67-343 (345)
22 PF02836 Glyco_hydro_2_C: Glyc 98.3 2.4E-05 5.2E-10 82.3 17.8 92 192-306 35-132 (298)
23 PF11790 Glyco_hydro_cc: Glyco 97.9 0.00014 3E-09 74.9 13.8 78 406-513 136-217 (239)
24 COG3867 Arabinogalactan endo-1 97.8 0.0099 2.2E-07 63.1 24.8 209 196-472 65-286 (403)
25 PRK10340 ebgA cryptic beta-D-g 97.7 0.0017 3.7E-08 79.7 20.1 220 192-550 354-601 (1021)
26 COG2730 BglC Endoglucanase [Ca 97.4 0.0008 1.7E-08 74.5 10.8 110 196-308 76-193 (407)
27 COG1874 LacA Beta-galactosidas 97.3 0.00035 7.6E-09 81.5 7.2 125 182-317 21-173 (673)
28 PRK09525 lacZ beta-D-galactosi 97.3 0.01 2.2E-07 73.0 19.9 233 192-550 370-627 (1027)
29 PF14587 Glyco_hydr_30_2: O-Gl 96.8 0.22 4.8E-06 55.0 22.3 273 203-530 57-372 (384)
30 PF03198 Glyco_hydro_72: Gluca 96.7 0.056 1.2E-06 58.1 15.9 78 194-295 54-132 (314)
31 PF01301 Glyco_hydro_35: Glyco 96.1 0.011 2.5E-07 63.5 6.6 96 193-294 24-127 (319)
32 COG3934 Endo-beta-mannanase [C 95.3 0.13 2.8E-06 58.0 11.0 293 171-550 3-321 (587)
33 PLN03059 beta-galactosidase; P 94.7 0.23 4.9E-06 59.8 11.6 111 193-309 59-180 (840)
34 PLN02803 beta-amylase 94.7 0.082 1.8E-06 60.2 7.5 104 195-308 109-252 (548)
35 PLN00197 beta-amylase; Provisi 94.3 0.12 2.6E-06 59.2 7.8 105 194-308 128-272 (573)
36 PLN02161 beta-amylase 94.3 0.098 2.1E-06 59.3 7.0 110 189-308 113-262 (531)
37 COG3664 XynB Beta-xylosidase [ 94.0 0.44 9.4E-06 53.0 11.1 265 201-547 13-294 (428)
38 PF13204 DUF4038: Protein of u 94.0 0.36 7.7E-06 51.4 10.3 107 196-306 33-156 (289)
39 PF01373 Glyco_hydro_14: Glyco 93.9 0.046 9.9E-07 60.6 3.5 103 194-307 17-151 (402)
40 PLN02705 beta-amylase 92.3 0.41 8.9E-06 55.4 8.0 106 193-307 268-413 (681)
41 PLN02905 beta-amylase 92.0 0.24 5.3E-06 57.4 5.8 110 189-307 282-431 (702)
42 PLN02801 beta-amylase 91.9 0.33 7.2E-06 55.2 6.5 104 195-307 39-182 (517)
43 PF00332 Glyco_hydro_17: Glyco 91.1 0.32 6.8E-06 52.5 5.3 88 447-541 213-308 (310)
44 COG3250 LacZ Beta-galactosidas 89.2 1.6 3.5E-05 52.8 9.5 125 145-307 281-408 (808)
45 PF02055 Glyco_hydro_30: O-Gly 86.7 39 0.00084 39.1 18.3 112 406-549 301-421 (496)
46 PF12891 Glyco_hydro_44: Glyco 84.0 1.8 3.9E-05 45.2 5.4 71 238-308 24-137 (239)
47 PF14488 DUF4434: Domain of un 79.8 17 0.00036 35.8 10.3 103 193-306 20-130 (166)
48 PF12876 Cellulase-like: Sugar 78.2 3.7 8E-05 35.8 4.6 18 290-307 2-22 (88)
49 KOG0626 Beta-glucosidase, lact 75.6 1.1 2.5E-05 51.3 0.8 112 498-628 384-500 (524)
50 COG5309 Exo-beta-1,3-glucanase 73.3 9.6 0.00021 40.7 6.8 58 181-259 51-108 (305)
51 KOG0496 Beta-galactosidase [Ca 68.2 12 0.00025 44.3 6.7 93 194-292 50-154 (649)
52 smart00642 Aamy Alpha-amylase 56.9 36 0.00078 33.3 7.0 68 190-259 16-91 (166)
53 COG1501 Alpha-glucosidases, fa 51.4 59 0.0013 39.7 8.9 100 205-312 294-422 (772)
54 cd06592 GH31_glucosidase_KIAA1 48.8 1.3E+02 0.0028 32.3 10.2 104 196-307 33-167 (303)
55 COG5520 O-Glycosyl hydrolase [ 48.1 4.5E+02 0.0098 29.7 14.2 91 204-307 77-179 (433)
56 PLN02361 alpha-amylase 47.7 38 0.00081 38.1 6.1 69 190-258 26-96 (401)
57 KOG2233 Alpha-N-acetylglucosam 46.4 1.9E+02 0.0041 33.7 11.2 115 192-306 77-248 (666)
58 cd03174 DRE_TIM_metallolyase D 46.2 74 0.0016 32.5 7.6 83 196-294 77-159 (265)
59 COG3534 AbfA Alpha-L-arabinofu 45.1 5.2E+02 0.011 30.0 14.3 97 196-307 51-175 (501)
60 PRK12399 tagatose 1,6-diphosph 40.7 1.7E+02 0.0037 32.2 9.5 59 198-264 110-168 (324)
61 PF14871 GHL6: Hypothetical gl 40.5 60 0.0013 30.9 5.5 55 195-258 2-64 (132)
62 cd07945 DRE_TIM_CMS Leptospira 39.0 86 0.0019 33.4 7.0 86 194-294 75-160 (280)
63 PRK12581 oxaloacetate decarbox 38.9 1.1E+02 0.0023 35.4 8.1 73 192-294 99-176 (468)
64 cd07939 DRE_TIM_NifV Streptomy 37.7 83 0.0018 32.8 6.5 81 196-294 72-152 (259)
65 cd07944 DRE_TIM_HOA_like 4-hyd 35.9 1.3E+02 0.0029 31.6 7.8 67 196-294 85-151 (266)
66 PRK04161 tagatose 1,6-diphosph 35.9 2.2E+02 0.0047 31.5 9.4 59 198-264 112-170 (329)
67 TIGR02631 xylA_Arthro xylose i 35.7 4.3E+02 0.0094 29.5 12.1 76 190-276 29-105 (382)
68 PRK14040 oxaloacetate decarbox 35.2 1.3E+02 0.0028 35.6 8.3 71 192-291 91-166 (593)
69 PRK14041 oxaloacetate decarbox 35.0 1.2E+02 0.0027 34.8 7.8 73 192-294 89-166 (467)
70 cd06601 GH31_lyase_GLase GLase 34.8 1.6E+02 0.0034 32.3 8.3 104 199-311 30-139 (332)
71 PRK12677 xylose isomerase; Pro 34.8 5.3E+02 0.012 28.8 12.6 80 185-276 24-104 (384)
72 PLN00196 alpha-amylase; Provis 34.0 97 0.0021 35.1 6.8 68 191-258 42-112 (428)
73 cd07948 DRE_TIM_HCS Saccharomy 33.2 65 0.0014 34.0 4.9 60 196-259 74-133 (262)
74 PF05089 NAGLU: Alpha-N-acetyl 33.1 1E+02 0.0022 34.1 6.4 110 192-306 18-184 (333)
75 PF07488 Glyco_hydro_67M: Glyc 32.4 2.3E+02 0.005 31.1 8.8 89 193-295 57-150 (328)
76 PRK05692 hydroxymethylglutaryl 32.4 1.3E+02 0.0028 32.3 7.0 87 194-292 80-167 (287)
77 cd06543 GH18_PF-ChiA-like PF-C 31.6 1.8E+02 0.004 31.2 8.1 78 200-294 19-104 (294)
78 PLN02784 alpha-amylase 31.3 97 0.0021 38.3 6.4 69 190-258 518-588 (894)
79 cd06525 GH25_Lyc-like Lyc mura 31.2 2.4E+02 0.0052 27.7 8.3 85 197-298 12-121 (184)
80 PRK05402 glycogen branching en 30.4 2.3E+02 0.005 34.3 9.4 88 196-294 268-397 (726)
81 cd06603 GH31_GANC_GANAB_alpha 30.4 1.3E+02 0.0028 32.7 6.8 108 196-310 27-167 (339)
82 PF02638 DUF187: Glycosyl hydr 30.3 2.9E+02 0.0062 29.9 9.3 99 194-294 20-154 (311)
83 PRK05799 coproporphyrinogen II 30.1 1.2E+02 0.0027 33.1 6.6 93 196-307 99-193 (374)
84 cd06593 GH31_xylosidase_YicI Y 29.6 2.6E+02 0.0057 29.7 8.9 105 195-307 26-161 (308)
85 TIGR00539 hemN_rel putative ox 29.2 1.4E+02 0.003 32.6 6.9 77 196-291 100-178 (360)
86 PRK12313 glycogen branching en 29.0 2.7E+02 0.0058 33.1 9.5 92 192-294 169-302 (633)
87 PLN02746 hydroxymethylglutaryl 28.4 1.6E+02 0.0034 32.7 7.0 87 195-294 123-210 (347)
88 PRK12331 oxaloacetate decarbox 27.9 2.2E+02 0.0048 32.6 8.3 69 196-294 99-167 (448)
89 PLN02389 biotin synthase 27.8 1.5E+02 0.0032 33.1 6.8 57 194-258 176-233 (379)
90 PF04646 DUF604: Protein of un 27.3 42 0.00092 35.6 2.3 77 242-320 72-148 (255)
91 TIGR01210 conserved hypothetic 26.7 2.5E+02 0.0054 30.3 8.1 115 188-320 111-228 (313)
92 COG1523 PulA Type II secretory 26.6 1.3E+02 0.0029 36.3 6.5 59 199-258 206-285 (697)
93 COG3589 Uncharacterized conser 26.5 1.2E+02 0.0026 33.6 5.6 70 198-285 21-90 (360)
94 cd06602 GH31_MGAM_SI_GAA This 26.3 2.2E+02 0.0047 31.1 7.7 105 196-308 27-168 (339)
95 PF02065 Melibiase: Melibiase; 26.0 5.4E+02 0.012 29.0 10.7 99 196-298 61-188 (394)
96 TIGR00433 bioB biotin syntheta 25.7 1.1E+02 0.0024 32.1 5.1 55 196-258 123-178 (296)
97 TIGR02090 LEU1_arch isopropylm 25.7 1.7E+02 0.0036 32.4 6.7 84 191-291 69-152 (363)
98 cd02874 GH18_CFLE_spore_hydrol 25.0 2.2E+02 0.0049 30.2 7.3 95 188-294 4-103 (313)
99 cd07941 DRE_TIM_LeuA3 Desulfob 24.9 2E+02 0.0042 30.4 6.8 82 196-291 81-162 (273)
100 TIGR01232 lacD tagatose 1,6-di 24.6 3.1E+02 0.0067 30.3 8.2 60 198-265 111-170 (325)
101 PRK09441 cytoplasmic alpha-amy 24.6 1E+02 0.0022 35.2 4.9 72 190-261 19-106 (479)
102 cd07938 DRE_TIM_HMGL 3-hydroxy 24.6 2.2E+02 0.0048 30.1 7.1 87 195-294 75-162 (274)
103 TIGR02660 nifV_homocitr homoci 24.1 1.8E+02 0.0039 32.1 6.5 82 195-294 74-155 (365)
104 KOG1065 Maltase glucoamylase a 23.1 3.2E+02 0.007 33.6 8.7 105 196-311 314-454 (805)
105 PF03659 Glyco_hydro_71: Glyco 23.0 3E+02 0.0064 30.9 8.0 71 193-285 17-87 (386)
106 cd07943 DRE_TIM_HOA 4-hydroxy- 23.0 2.3E+02 0.005 29.5 6.9 67 196-294 88-154 (263)
107 TIGR01515 branching_enzym alph 22.9 4.2E+02 0.009 31.5 9.6 98 195-294 158-288 (613)
108 PF04055 Radical_SAM: Radical 22.8 95 0.0021 28.1 3.5 113 132-254 22-143 (166)
109 TIGR02403 trehalose_treC alpha 22.8 1.3E+02 0.0029 35.0 5.4 65 192-259 26-96 (543)
110 PRK12858 tagatose 1,6-diphosph 22.7 3.2E+02 0.007 30.2 8.1 52 199-258 112-163 (340)
111 cd06542 GH18_EndoS-like Endo-b 22.5 2.8E+02 0.006 28.5 7.3 56 236-294 49-104 (255)
112 PRK08195 4-hyroxy-2-oxovalerat 22.0 1.8E+02 0.0038 32.0 5.9 68 196-295 91-158 (337)
113 PRK11858 aksA trans-homoaconit 21.9 2.3E+02 0.0049 31.5 6.8 81 196-294 78-158 (378)
114 cd06600 GH31_MGAM-like This fa 21.3 4.2E+02 0.009 28.6 8.5 105 196-308 27-163 (317)
115 TIGR03234 OH-pyruv-isom hydrox 20.9 1.4E+02 0.003 30.4 4.7 68 191-264 82-150 (254)
116 PRK12568 glycogen branching en 20.8 3.9E+02 0.0084 32.7 8.8 87 199-294 276-401 (730)
No 1
>KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.9e-104 Score=860.97 Aligned_cols=384 Identities=32% Similarity=0.515 Sum_probs=334.1
Q ss_pred cCCccccccc-cccccccCCCCcccccCCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHH
Q 006252 165 VPTENEEVHH-KVTAWHNVPHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWI 243 (654)
Q Consensus 165 ~~~~~~~~~~-~~~~~~n~~~pe~a~~~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~l 243 (654)
.||+||.|+| .|++..+..+++.||++||+|+|||+|||+||+++||||||||||+|.|++ .+.||++||+||++|
T Consensus 62 g~svWD~f~~~~p~~~~~~~ngdva~D~Yh~ykeDv~Lmk~lgv~afRFSIsWSRIlP~G~~---~~gVN~~Gi~fY~~L 138 (524)
T KOG0626|consen 62 GPSVWDTFTHKYPGKICDGSNGDVAVDFYHRYKEDVKLMKELGVDAFRFSISWSRILPNGRL---TGGVNEAGIQFYNNL 138 (524)
T ss_pred CCchhhhhhccCCcccccCCCCCeechhhhhhHHHHHHHHHcCCCeEEEEeehHhhCCCCCc---CCCcCHHHHHHHHHH
Confidence 7899999998 555888888899999999999999999999999999999999999998742 367999999999999
Q ss_pred HHHHHHcCCeEEEEeccCCCcccccc-cCCCCChhhHHHHHHHHHHHHHHhCCccceEEEccCcceeeeccccCCCCCCC
Q 006252 244 INRVRSYGMKVMLTLFHHSLPAWAGE-YGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCMLTYCAGTWPGG 322 (654)
Q Consensus 244 Id~L~~~GI~PiVTL~HwDLP~wL~~-~GGW~n~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPnv~~~~GY~~G~~pPg 322 (654)
|++|+++||+|+|||||||+||+|++ +|||+|++++++|.+||++||++||||||+|||||||++++..||..|..|||
T Consensus 139 I~eL~~nGI~P~VTLfHwDlPq~LeDeYgGwLn~~ivedF~~yA~~CF~~fGDrVK~WiT~NEP~v~s~~gY~~G~~aPG 218 (524)
T KOG0626|consen 139 IDELLANGIEPFVTLFHWDLPQALEDEYGGWLNPEIVEDFRDYADLCFQEFGDRVKHWITFNEPNVFSIGGYDTGTKAPG 218 (524)
T ss_pred HHHHHHcCCeEEEEEecCCCCHHHHHHhccccCHHHHHHHHHHHHHHHHHhcccceeeEEecccceeeeehhccCCCCCC
Confidence 99999999999999999999999987 89999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhh-h-hcCCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeeccccCCCCc--ccHHHHHHHhccc--
Q 006252 323 NPDMLEV-A-TSALPTGVFNQAMHWMAIAHSKAYDYIHAKSSTSTKSKVGVAHHVSFMRPYGL--FDVTAVTLANTLT-- 396 (654)
Q Consensus 323 ~~~~~~~-~-~~~~~~~~~~~a~hnLLlAHA~Ay~~ir~~~~~~q~g~IGi~~~~~~~~P~~~--~D~~aa~~~n~l~-- 396 (654)
+++..-. + ...+.+++| .|.||||+|||+||++||+.++..|+|+|||+++..|++|+++ .|..|+.++..+.
T Consensus 219 rCs~~~~~c~~g~s~~epY-iv~HNllLAHA~Av~~yr~kyk~~Q~G~IGi~~~~~w~eP~~~s~~D~~Aa~Ra~~F~~g 297 (524)
T KOG0626|consen 219 RCSKYVGNCSAGNSGTEPY-IVAHNLLLAHAAAVDLYRKKYKKKQGGKIGIALSARWFEPYDDSKEDKEAAERALDFFLG 297 (524)
T ss_pred CCCcccccCCCCCCCCCcc-hHHHHHHHHHHHHHHHHHHhhhhhcCCeEeEEEeeeeeccCCCChHHHHHHHHHHHhhhh
Confidence 8864311 1 122445666 7899999999999999999998889999999999999999874 6888877654321
Q ss_pred ---------------------CCccc-----cccCCCcceeEeeccCcceeeCCCCcc------cCCC------------
Q 006252 397 ---------------------TFPYV-----DSISDRLDFIGINYYGQEVVSGPGLKL------VETD------------ 432 (654)
Q Consensus 397 ---------------------~~p~~-----d~I~~~~DFiGINyYt~~~V~~~~~~~------~~~~------------ 432 (654)
++|.+ ..+++++||+|||||++.+++...... ...+
T Consensus 298 w~l~p~~~GdYP~~Mk~~vg~rLP~FT~ee~~~lKGS~DFvGiNyYts~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 377 (524)
T KOG0626|consen 298 WFLEPLTFGDYPDEMKERVGSRLPKFTEEESKLLKGSYDFVGINYYTSRYVKHLKPPPDPSQPGWSTDSGVDWTLEGNDL 377 (524)
T ss_pred hhhcccccCCcHHHHHHHhcccCCCCCHHHHHHhcCchhhceeehhhhhhhhccCCCCCCCCcccccccceeeeeccccc
Confidence 12222 246899999999999999887532110 0000
Q ss_pred --CcccC-CcccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCCC-----------CccccHHHHHHHHHHHHHHHH-cC
Q 006252 433 --EYSES-GRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDE-----------TDLIRRPYVIEHLLAVYAAMI-TG 497 (654)
Q Consensus 433 --~~s~~-G~~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad~-----------~D~~Ri~YL~~hL~~v~kAi~-dG 497 (654)
..+.. ...++|+||+++|++++++|+ |+||||||||+.+. +|..|+.|++.||.+|++||. +|
T Consensus 378 ~~~~~~~~~~~v~P~Glr~~L~yiK~~Y~--np~iyItENG~~d~~~~~~~~~~~l~D~~Ri~Y~~~~L~~~~kAi~~dg 455 (524)
T KOG0626|consen 378 IGPKAGSDWLPVYPWGLRKLLNYIKDKYG--NPPIYITENGFDDLDGGTKSLEVALKDTKRIEYLQNHLQAVLKAIKEDG 455 (524)
T ss_pred ccccccccceeeccHHHHHHHHHHHhhcC--CCcEEEEeCCCCcccccccchhhhhcchHHHHHHHHHHHHHHHHHHhcC
Confidence 00111 236899999999999999999 79999999999973 589999999999999999996 89
Q ss_pred CCeeEEEEeecccccCCCCCCCCccceEEEcCCCCccccccchHHHHHHHHHcCCCC
Q 006252 498 VPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTTGKVT 554 (654)
Q Consensus 498 V~V~GY~~WSLlDNfEW~~GY~~RFGL~~VD~~~~l~R~PK~Sa~wY~~ii~~~~i~ 554 (654)
|||+|||+|||||||||.+||+.||||++|||.+.++|+||.|++||+++++.+..+
T Consensus 456 vnv~GYf~WSLmDnfEw~~Gy~~RFGlyyVDf~d~l~R~pK~Sa~wy~~fl~~~~~~ 512 (524)
T KOG0626|consen 456 VNVKGYFVWSLLDNFEWLDGYKVRFGLYYVDFKDPLKRYPKLSAKWYKKFLKGKVKP 512 (524)
T ss_pred CceeeEEEeEcccchhhhcCcccccccEEEeCCCCCcCCchhHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999889999999999999999987653
No 2
>PRK13511 6-phospho-beta-galactosidase; Provisional
Probab=100.00 E-value=3.3e-98 Score=827.07 Aligned_cols=365 Identities=29% Similarity=0.480 Sum_probs=316.9
Q ss_pred cCCccccccccccccccCCCCcccccCCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHH
Q 006252 165 VPTENEEVHHKVTAWHNVPHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWII 244 (654)
Q Consensus 165 ~~~~~~~~~~~~~~~~n~~~pe~a~~~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lI 244 (654)
.||+||.|+|+++++ +++.||+|||+|+|||+|||+||+++|||||+||||+|++ .|.+|++||+||++||
T Consensus 30 g~siwD~~~~~~~~~----~~~~a~d~Y~ry~eDi~L~~~lG~~~yRfSIsWsRI~P~G-----~g~vN~~gl~~Y~~li 100 (469)
T PRK13511 30 GPVAWDKYLEENYWF----TPDPASDFYHRYPEDLKLAEEFGVNGIRISIAWSRIFPDG-----YGEVNPKGVEYYHRLF 100 (469)
T ss_pred ccchhhcccccCCCC----CCCcccchhhhhHHHHHHHHHhCCCEEEeeccHhhcCcCC-----CCCcCHHHHHHHHHHH
Confidence 789999999988774 6899999999999999999999999999999999999986 3679999999999999
Q ss_pred HHHHHcCCeEEEEeccCCCcccccccCCCCChhhHHHHHHHHHHHHHHhCCccceEEEccCcceeeeccccCCCCCCCCC
Q 006252 245 NRVRSYGMKVMLTLFHHSLPAWAGEYGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCMLTYCAGTWPGGNP 324 (654)
Q Consensus 245 d~L~~~GI~PiVTL~HwDLP~wL~~~GGW~n~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPnv~~~~GY~~G~~pPg~~ 324 (654)
++|+++||+|||||||||||+||+++|||+|++++++|++||++||++||| ||+|+|||||++++..||..|.+|||..
T Consensus 101 d~l~~~GI~P~VTL~H~dlP~~L~~~GGW~n~~~v~~F~~YA~~~~~~fgd-Vk~W~T~NEP~~~~~~gy~~G~~~Pg~~ 179 (469)
T PRK13511 101 AECHKRHVEPFVTLHHFDTPEALHSNGDWLNRENIDHFVRYAEFCFEEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPGIK 179 (469)
T ss_pred HHHHHcCCEEEEEecCCCCcHHHHHcCCCCCHHHHHHHHHHHHHHHHHhCC-CCEEEEccchhhhhhcchhhcccCCCCC
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999864
Q ss_pred ChhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeeccccCCCC---cccHHHHHHHhcc----cC
Q 006252 325 DMLEVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSSTSTKSKVGVAHHVSFMRPYG---LFDVTAVTLANTL----TT 397 (654)
Q Consensus 325 ~~~~~~~~~~~~~~~~~a~hnLLlAHA~Ay~~ir~~~~~~q~g~IGi~~~~~~~~P~~---~~D~~aa~~~n~l----~~ 397 (654)
... .. ..+++||+++||++||++||+.. +.++||++++..+++|.+ +.|+.|+.+.+.+ +.
T Consensus 180 ~~~--------~~-~~~~~hn~llAHa~A~~~~~~~~---~~g~IGi~~~~~~~~P~~~~~~~d~~aa~~~~~~~~~~f~ 247 (469)
T PRK13511 180 YDL--------AK-VFQSHHNMMVAHARAVKLFKDKG---YKGEIGVVHALPTKYPIDPDNPEDVRAAELEDIIHNKFIL 247 (469)
T ss_pred ccH--------HH-HHHHHHHHHHHHHHHHHHHHHhC---CCCeEEEEecCceEeeCCCCCHHHHHHHHHHHHHhhhccc
Confidence 210 12 34899999999999999999975 457899999999999976 5788887654321 11
Q ss_pred -------Ccc-----c------------------cccC---CCcceeEeeccCcceeeCC--C-----------------
Q 006252 398 -------FPY-----V------------------DSIS---DRLDFIGINYYGQEVVSGP--G----------------- 425 (654)
Q Consensus 398 -------~p~-----~------------------d~I~---~~~DFiGINyYt~~~V~~~--~----------------- 425 (654)
+|. + +.++ +++||+|||||++.+|+.. .
T Consensus 248 dp~~~G~Yp~~~~~~~~~~~~~~~~~l~~t~~d~~~ik~~~~~~DFiGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~ 327 (469)
T PRK13511 248 DATYLGYYSEETMEGVNHILEANGGSLDIRDEDFEILKAAKDLNDFLGINYYMSDWMRAYDGETEIIHNGTGEKGSSKYQ 327 (469)
T ss_pred chhhCCCCCHHHHHHHHHhhhhcCCCCCCCHHHHHHHhcCCCCCCEEEechhhcceeecCCCccccccCCCCcccccccc
Confidence 110 0 1132 4589999999999988641 0
Q ss_pred Ccc----cC--CCCcccCCcccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCC---------CCccccHHHHHHHHHHH
Q 006252 426 LKL----VE--TDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSD---------ETDLIRRPYVIEHLLAV 490 (654)
Q Consensus 426 ~~~----~~--~~~~s~~G~~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad---------~~D~~Ri~YL~~hL~~v 490 (654)
... .. +.+.+.+||+|+|+||+.+|++++++|++ .+||||||||++. .+|..|+.||++||.+|
T Consensus 328 ~~~~~~~~~~~~~~~~~~gw~i~P~Gl~~~l~~~~~~Y~~-~~pi~ITENG~~~~d~~~~~~~~~D~~Ri~yl~~hl~~~ 406 (469)
T PRK13511 328 LKGVGERVKPPDVPTTDWDWIIYPQGLYDQLMRIKKDYPN-YKKIYITENGLGYKDEFVDGKTVDDDKRIDYVKQHLEVI 406 (469)
T ss_pred ccCccccccCCCCCcCCCCCeECcHHHHHHHHHHHHHcCC-CCCEEEecCCcCCCCCcCCCCccCCHHHHHHHHHHHHHH
Confidence 000 11 11346689999999999999999999972 1589999999982 34889999999999999
Q ss_pred HHHHHcCCCeeEEEEeecccccCCCCCCCCccceEEEcCCCCccccccchHHHHHHHHHcCCC
Q 006252 491 YAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTTGKV 553 (654)
Q Consensus 491 ~kAi~dGV~V~GY~~WSLlDNfEW~~GY~~RFGL~~VD~~~~l~R~PK~Sa~wY~~ii~~~~i 553 (654)
++||++||||+||++|||+|||||.+||++||||++||+++ ++|+||+|++||+++|+++++
T Consensus 407 ~~Ai~dGv~v~GY~~WSl~DnfEW~~Gy~~RfGl~~VD~~~-~~R~pK~S~~wy~~~i~~~~~ 468 (469)
T PRK13511 407 SDAISDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFET-QERYPKKSAYWYKKLAETKVI 468 (469)
T ss_pred HHHHHcCCCEEEEeecccccccchhcCccCccceEEECCCc-CccccccHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999974 789999999999999999876
No 3
>PLN02849 beta-glucosidase
Probab=100.00 E-value=3.1e-98 Score=831.64 Aligned_cols=378 Identities=24% Similarity=0.383 Sum_probs=322.2
Q ss_pred cCCccccccccccccccCCCCcccccCCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHH
Q 006252 165 VPTENEEVHHKVTAWHNVPHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWII 244 (654)
Q Consensus 165 ~~~~~~~~~~~~~~~~n~~~pe~a~~~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lI 244 (654)
.||+||.|+|+++ +.++++||+|||+|+|||+|||+||+++|||||+||||+|++ .|.+|++||+||++||
T Consensus 55 g~SiwD~~~~~~~----~~~~~~a~D~YhrY~eDI~Lm~~lG~~aYRfSIsWsRI~P~G-----~g~vN~~gl~fY~~li 125 (503)
T PLN02849 55 KPSVWDTFLHSRN----MSNGDIACDGYHKYKEDVKLMVETGLDAFRFSISWSRLIPNG-----RGSVNPKGLQFYKNFI 125 (503)
T ss_pred cCcceeeeeccCC----CCCCCccccHHHhHHHHHHHHHHcCCCeEEEeccHHhcCcCC-----CCCCCHHHHHHHHHHH
Confidence 7899999999763 457899999999999999999999999999999999999986 3689999999999999
Q ss_pred HHHHHcCCeEEEEeccCCCcccccc-cCCCCChhhHHHHHHHHHHHHHHhCCccceEEEccCcceeeeccccCCCCCCCC
Q 006252 245 NRVRSYGMKVMLTLFHHSLPAWAGE-YGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCMLTYCAGTWPGGN 323 (654)
Q Consensus 245 d~L~~~GI~PiVTL~HwDLP~wL~~-~GGW~n~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPnv~~~~GY~~G~~pPg~ 323 (654)
++|+++||+|||||||||||+||++ +|||+|++++++|++||++||++|||+||+|+|||||++++..||..|.+|||.
T Consensus 126 d~l~~~GI~P~VTL~H~dlP~~L~~~yGGW~nr~~v~~F~~YA~~~f~~fgDrVk~WiT~NEP~~~~~~gy~~G~~~Pg~ 205 (503)
T PLN02849 126 QELVKHGIEPHVTLFHYDHPQYLEDDYGGWINRRIIKDFTAYADVCFREFGNHVKFWTTINEANIFTIGGYNDGITPPGR 205 (503)
T ss_pred HHHHHcCCeEEEeecCCCCcHHHHHhcCCcCCchHHHHHHHHHHHHHHHhcCcCCEEEEecchhhhhhchhhhccCCCCc
Confidence 9999999999999999999999998 599999999999999999999999999999999999999999999999999986
Q ss_pred CChh-hhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeeccccCCCC--cccHHHHHHHhcccC---
Q 006252 324 PDML-EVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSSTSTKSKVGVAHHVSFMRPYG--LFDVTAVTLANTLTT--- 397 (654)
Q Consensus 324 ~~~~-~~~~~~~~~~~~~~a~hnLLlAHA~Ay~~ir~~~~~~q~g~IGi~~~~~~~~P~~--~~D~~aa~~~n~l~~--- 397 (654)
.... ..+..........+++||+++||++||++||+.....+.++||++++..+++|.+ +.|+.|+.+.+.+..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~a~hn~llAHa~A~~~~~~~~~~~~~~~IGi~~~~~~~~P~~~~~~D~~AA~~~~~~~~~~f 285 (503)
T PLN02849 206 CSSPGRNCSSGNSSTEPYIVGHNLLLAHASVSRLYKQKYKDMQGGSIGFSLFALGFTPSTSSKDDDIATQRAKDFYLGWM 285 (503)
T ss_pred cccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEEECceeecCCCCHHHHHHHHHHHHHhhhhh
Confidence 3210 0000000011234899999999999999999975434568999999999999975 678888765442211
Q ss_pred --------Cc------------c-----ccccCCCcceeEeeccCcceeeCCC-------Cccc----CC--CCcccCCc
Q 006252 398 --------FP------------Y-----VDSISDRLDFIGINYYGQEVVSGPG-------LKLV----ET--DEYSESGR 439 (654)
Q Consensus 398 --------~p------------~-----~d~I~~~~DFiGINyYt~~~V~~~~-------~~~~----~~--~~~s~~G~ 439 (654)
+| . .+.|++++||+|||||++.+|+... .... .+ ...+++||
T Consensus 286 ~dp~~~G~YP~~~~~~l~~~lp~~~~~d~~~i~~~~DFlGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gw 365 (503)
T PLN02849 286 LEPLIFGDYPDEMKRTIGSRLPVFSKEESEQVKGSSDFIGVIHYLAASVTNIKIKPSLSGNPDFYSDMGVSLGKFSAFEY 365 (503)
T ss_pred hHHHhCCCccHHHHHHHhcCCCCCCHHHHHHhcCCCCEEEEeccchhhcccCCCCCCCCCCCccccccCCCCCccCCCCC
Confidence 11 1 1236788999999999999887411 1100 01 23456899
Q ss_pred ccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCC-------CCccccHHHHHHHHHHHHHHHHcCCCeeEEEEeeccccc
Q 006252 440 GVYPDGLFRVLHQFHERYKHLNLPFIITENGVSD-------ETDLIRRPYVIEHLLAVYAAMITGVPVIGYLFWTISDNW 512 (654)
Q Consensus 440 ~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad-------~~D~~Ri~YL~~hL~~v~kAi~dGV~V~GY~~WSLlDNf 512 (654)
+|+|+||+.+|++++++|+ ++||||||||++. .+|..|++||++||.+|++||++||||+||++|||+|||
T Consensus 366 ~i~P~Gl~~~L~~~~~rY~--~pPi~ITENG~~~~d~~~~~v~D~~Ri~Yl~~hL~~l~~Ai~dGv~V~GY~~WSl~Dnf 443 (503)
T PLN02849 366 AVAPWAMESVLEYIKQSYG--NPPVYILENGTPMKQDLQLQQKDTPRIEYLHAYIGAVLKAVRNGSDTRGYFVWSFMDLY 443 (503)
T ss_pred eEChHHHHHHHHHHHHhcC--CCCEEEeCCCCCccCCCCCcccCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchhhh
Confidence 9999999999999999997 4689999999994 358899999999999999999999999999999999999
Q ss_pred CCCCCCCCccceEEEcCCC-CccccccchHHHHHHHHHcCCC
Q 006252 513 EWADGYGPKFGLVAVDRAN-NLARIPRPSYHLFTKVVTTGKV 553 (654)
Q Consensus 513 EW~~GY~~RFGL~~VD~~~-~l~R~PK~Sa~wY~~ii~~~~i 553 (654)
||..||++||||++||+++ +++|+||+|++||+++|++++.
T Consensus 444 EW~~Gy~~RfGLi~VD~~~~~~~R~pK~S~~wy~~ii~~~~~ 485 (503)
T PLN02849 444 ELLKGYEFSFGLYSVNFSDPHRKRSPKLSAHWYSAFLKGNST 485 (503)
T ss_pred chhccccCccceEEECCCCCCcceecccHHHHHHHHHHhCCC
Confidence 9999999999999999986 4799999999999999999864
No 4
>TIGR01233 lacG 6-phospho-beta-galactosidase. This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation.
Probab=100.00 E-value=8.2e-98 Score=823.12 Aligned_cols=366 Identities=28% Similarity=0.472 Sum_probs=317.1
Q ss_pred cCCccccccccccccccCCCCcccccCCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHH
Q 006252 165 VPTENEEVHHKVTAWHNVPHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWII 244 (654)
Q Consensus 165 ~~~~~~~~~~~~~~~~n~~~pe~a~~~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lI 244 (654)
.||+||.|+|.++++ +++.||+|||+|+|||+|||+||+++|||||+||||+|++ .|.+|++||+||++||
T Consensus 29 g~siwD~~~~~~~~~----~~~~a~d~yhry~eDi~L~~~lG~~~yRfSIsWsRI~P~g-----~~~~N~~gl~~Y~~li 99 (467)
T TIGR01233 29 GPVAWDKYLEDNYWY----TAEPASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFPTG-----YGEVNEKGVEFYHKLF 99 (467)
T ss_pred cCchhhccccCCCCC----CCCccCchhhhHHHHHHHHHHcCCCEEEEecchhhccCCC-----CCCcCHHHHHHHHHHH
Confidence 789999999877663 5799999999999999999999999999999999999986 3679999999999999
Q ss_pred HHHHHcCCeEEEEeccCCCcccccccCCCCChhhHHHHHHHHHHHHHHhCCccceEEEccCcceeeeccccCCCCCCCCC
Q 006252 245 NRVRSYGMKVMLTLFHHSLPAWAGEYGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCMLTYCAGTWPGGNP 324 (654)
Q Consensus 245 d~L~~~GI~PiVTL~HwDLP~wL~~~GGW~n~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPnv~~~~GY~~G~~pPg~~ 324 (654)
++|+++||+|||||||||||+||+++|||+|++++++|++||++||++||| |++|+|||||++++..||+.|.+||+..
T Consensus 100 d~l~~~GI~P~VTL~H~dlP~~L~~~GGW~n~~~v~~F~~YA~~~f~~fgd-Vk~WiT~NEP~~~~~~gy~~G~~~Pg~~ 178 (467)
T TIGR01233 100 AECHKRHVEPFVTLHHFDTPEALHSNGDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPGIK 178 (467)
T ss_pred HHHHHcCCEEEEeccCCCCcHHHHHcCCCCCHHHHHHHHHHHHHHHHHhCC-CCEEEEecchhhhhhccchhcccCCCcc
Confidence 999999999999999999999999999999999999999999999999998 9999999999999999999999999853
Q ss_pred ChhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeeccccCCCC---cccHHHHHHHhcc----cC
Q 006252 325 DMLEVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSSTSTKSKVGVAHHVSFMRPYG---LFDVTAVTLANTL----TT 397 (654)
Q Consensus 325 ~~~~~~~~~~~~~~~~~a~hnLLlAHA~Ay~~ir~~~~~~q~g~IGi~~~~~~~~P~~---~~D~~aa~~~n~l----~~ 397 (654)
... .. ..+++||+++||++||++||+.. +.++||++++..+++|.+ +.|+.|+.+.+.+ +.
T Consensus 179 ~~~--------~~-~~~a~hn~l~AHa~A~~~~~~~~---~~~~IGi~~~~~~~~P~~~~~~~D~~aA~~~~~~~~~~f~ 246 (467)
T TIGR01233 179 YDL--------AK-VFQSHHNMMVSHARAVKLYKDKG---YKGEIGVVHALPTKYPYDPENPADVRAAELEDIIHNKFIL 246 (467)
T ss_pred chh--------HH-HHHHHHHHHHHHHHHHHHHHHhC---CCCeEEEEecCceeEECCCCCHHHHHHHHHHHHHhhhccc
Confidence 210 12 24899999999999999999975 457899999999999986 5788887654321 11
Q ss_pred -------Cc------------------c-----cccc---CCCcceeEeeccCcceeeCC--C-----------------
Q 006252 398 -------FP------------------Y-----VDSI---SDRLDFIGINYYGQEVVSGP--G----------------- 425 (654)
Q Consensus 398 -------~p------------------~-----~d~I---~~~~DFiGINyYt~~~V~~~--~----------------- 425 (654)
+| . .+.| ++++||+|||||++.+|+.. .
T Consensus 247 d~~~~G~Yp~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~~DFlGinyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~ 326 (467)
T TIGR01233 247 DATYLGHYSDKTMEGVNHILAENGGELDLRDEDFQALDAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQ 326 (467)
T ss_pred chhhCCCCCHHHHHHHHhhhhccCCCCCCCHHHHHHHhccCCCCCEEEEccccceeeccCCCccccccCCccccCccccc
Confidence 11 0 0113 47889999999999988641 0
Q ss_pred Ccc----cC--CCCcccCCcccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCC--------CCccccHHHHHHHHHHHH
Q 006252 426 LKL----VE--TDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSD--------ETDLIRRPYVIEHLLAVY 491 (654)
Q Consensus 426 ~~~----~~--~~~~s~~G~~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad--------~~D~~Ri~YL~~hL~~v~ 491 (654)
... .. +.+.+.+||+|+|+||+.+|++++++|+. .+||||||||++. .+|+.|+.||++||.+|+
T Consensus 327 ~~~~~~~~~~~~~~~t~~gw~i~P~Gl~~~L~~~~~~Y~~-~ppi~ItENG~~~~d~~~~g~i~D~~Ri~Yl~~hl~~~~ 405 (467)
T TIGR01233 327 IKGVGRRVAPDYVPRTDWDWIIYPEGLYDQIMRVKNDYPN-YKKIYITENGLGYKDEFVDNTVYDDGRIDYVKQHLEVLS 405 (467)
T ss_pred CCCcccccCCCCCCcCCCCCeeChHHHHHHHHHHHHHcCC-CCCEEEeCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHH
Confidence 000 01 11346789999999999999999999972 1479999999994 248899999999999999
Q ss_pred HHHHcCCCeeEEEEeecccccCCCCCCCCccceEEEcCCCCccccccchHHHHHHHHHcCCCC
Q 006252 492 AAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTTGKVT 554 (654)
Q Consensus 492 kAi~dGV~V~GY~~WSLlDNfEW~~GY~~RFGL~~VD~~~~l~R~PK~Sa~wY~~ii~~~~i~ 554 (654)
+||++||||+||++|||+|||||..||++||||++||++ +++|+||+|++||+++|++++++
T Consensus 406 ~Ai~dGv~v~GY~~WSl~Dn~Ew~~Gy~~RfGLv~VD~~-t~~R~~K~S~~wy~~ii~~~~~~ 467 (467)
T TIGR01233 406 DAIADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFD-TQERYPKKSAHWYKKLAETQVIE 467 (467)
T ss_pred HHHHcCCCEEEEeeccchhhhchhccccCccceEEECCC-CCccccccHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999997 57999999999999999998874
No 5
>PLN02814 beta-glucosidase
Probab=100.00 E-value=6.3e-98 Score=829.34 Aligned_cols=378 Identities=26% Similarity=0.388 Sum_probs=321.8
Q ss_pred cCCccccccccccccccCCCCcccccCCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHH
Q 006252 165 VPTENEEVHHKVTAWHNVPHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWII 244 (654)
Q Consensus 165 ~~~~~~~~~~~~~~~~n~~~pe~a~~~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lI 244 (654)
.||+||.|+|. .++.+++.||+|||+|+|||+|||+||+++|||||+||||+|++ .|.+|++||+||++||
T Consensus 53 g~siwD~~~~~----~~~~~~~~a~D~Yhry~EDI~L~k~lG~~ayRfSIsWsRI~P~G-----~g~~N~~Gl~fY~~lI 123 (504)
T PLN02814 53 TPSVWDTTSHC----YNGGNGDIASDGYHKYKEDVKLMAEMGLESFRFSISWSRLIPNG-----RGLINPKGLLFYKNLI 123 (504)
T ss_pred ccchhheeeec----cCCCCCCccccHHHhhHHHHHHHHHcCCCEEEEeccHhhcCcCC-----CCCCCHHHHHHHHHHH
Confidence 88999999983 35568999999999999999999999999999999999999986 3689999999999999
Q ss_pred HHHHHcCCeEEEEeccCCCcccccc-cCCCCChhhHHHHHHHHHHHHHHhCCccceEEEccCcceeeeccccCCCCCCCC
Q 006252 245 NRVRSYGMKVMLTLFHHSLPAWAGE-YGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCMLTYCAGTWPGGN 323 (654)
Q Consensus 245 d~L~~~GI~PiVTL~HwDLP~wL~~-~GGW~n~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPnv~~~~GY~~G~~pPg~ 323 (654)
++|+++||+|||||||||||+||++ +|||+|++++++|++||++||++|||+||+|+|||||++++..||..|.. ||.
T Consensus 124 d~l~~~GI~P~VTL~H~dlP~~L~~~yGGW~n~~~i~~F~~YA~~~f~~fgdrVk~WiT~NEP~~~~~~gy~~G~~-pg~ 202 (504)
T PLN02814 124 KELRSHGIEPHVTLYHYDLPQSLEDEYGGWINRKIIEDFTAFADVCFREFGEDVKLWTTINEATIFAIGSYGQGIR-YGH 202 (504)
T ss_pred HHHHHcCCceEEEecCCCCCHHHHHhcCCcCChhHHHHHHHHHHHHHHHhCCcCCEEEeccccchhhhcccccCcC-CCC
Confidence 9999999999999999999999998 59999999999999999999999999999999999999999999999985 554
Q ss_pred CChh---hhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeeccccCCCC--cccHHHHHHHhcccC-
Q 006252 324 PDML---EVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSSTSTKSKVGVAHHVSFMRPYG--LFDVTAVTLANTLTT- 397 (654)
Q Consensus 324 ~~~~---~~~~~~~~~~~~~~a~hnLLlAHA~Ay~~ir~~~~~~q~g~IGi~~~~~~~~P~~--~~D~~aa~~~n~l~~- 397 (654)
++.. .........+. .+++||+++||++||++||+.+...+.++||++++..+++|++ +.|+.|+.+++.+..
T Consensus 203 ~~~~~~~~~~~~~~~~~~-~~a~hn~llAHa~Av~~~~~~~~~~~~g~IGi~~~~~~~~P~~~~~~D~~Aa~~~~~~~~~ 281 (504)
T PLN02814 203 CSPNKFINCSTGNSCTET-YIAGHNMLLAHASASNLYKLKYKSKQRGSIGLSIFAFGLSPYTNSKDDEIATQRAKAFLYG 281 (504)
T ss_pred CCcccccccccCcchHHH-HHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCceeecCCCCHHHHHHHHHHHHHhhh
Confidence 3310 00000111233 4899999999999999999976544678999999999999985 578888765442211
Q ss_pred ----------Cc------------c-----ccccCCCcceeEeeccCcceeeCCC-C-------cc---------cCCCC
Q 006252 398 ----------FP------------Y-----VDSISDRLDFIGINYYGQEVVSGPG-L-------KL---------VETDE 433 (654)
Q Consensus 398 ----------~p------------~-----~d~I~~~~DFiGINyYt~~~V~~~~-~-------~~---------~~~~~ 433 (654)
+| . .+.|++++||+|||||++.+|+... . .. ....+
T Consensus 282 ~f~dp~~~G~YP~~~~~~l~~~lp~~~~~d~~~ikg~~DFiGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (504)
T PLN02814 282 WMLKPLVFGDYPDEMKRTLGSRLPVFSEEESEQVKGSSDFVGIIHYTTFYVTNRPAPSIFPSMNEGFFTDMGAYIISAGN 361 (504)
T ss_pred hhhHHHhCCCccHHHHHHHhcCCCCCCHHHHHHhcCCCCEEEEcccccceeccCCCCCcccccCCCcccccccccCCCCC
Confidence 11 1 1236789999999999999886421 0 00 00124
Q ss_pred cccCCcccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCC-----CCccccHHHHHHHHHHHHHHHHcCCCeeEEEEeec
Q 006252 434 YSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSD-----ETDLIRRPYVIEHLLAVYAAMITGVPVIGYLFWTI 508 (654)
Q Consensus 434 ~s~~G~~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad-----~~D~~Ri~YL~~hL~~v~kAi~dGV~V~GY~~WSL 508 (654)
.+++||+|||+||+.+|++++++|+ ++||||||||++. .+|..|+.||++||.+|++||++||||+||++|||
T Consensus 362 ~~~~gWei~P~Gl~~~L~~~~~rY~--~ppI~ITENG~~~~~~g~i~D~~Ri~Yl~~hl~~l~~Ai~dGv~V~GY~~WSl 439 (504)
T PLN02814 362 SSFFEFDATPWGLEGILEHIKQSYN--NPPIYILENGMPMKHDSTLQDTPRVEFIQAYIGAVLNAIKNGSDTRGYFVWSM 439 (504)
T ss_pred cCCCCCeECcHHHHHHHHHHHHhcC--CCCEEEECCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccc
Confidence 5678999999999999999999997 4689999999973 46899999999999999999999999999999999
Q ss_pred ccccCCCCCCCCccceEEEcCCC-CccccccchHHHHHHHHHcCCCCC
Q 006252 509 SDNWEWADGYGPKFGLVAVDRAN-NLARIPRPSYHLFTKVVTTGKVTR 555 (654)
Q Consensus 509 lDNfEW~~GY~~RFGL~~VD~~~-~l~R~PK~Sa~wY~~ii~~~~i~~ 555 (654)
||||||.+||++||||++||+++ +++|+||+|++||+++|++...+.
T Consensus 440 lDnfEW~~Gy~~RfGLvyVD~~~~~~~R~pK~S~~wy~~~i~~~~~~~ 487 (504)
T PLN02814 440 IDLYELLGGYTTSFGMYYVNFSDPGRKRSPKLSASWYTGFLNGTIDVA 487 (504)
T ss_pred hhhhchhccccCccceEEECCCCCCcceeeecHHHHHHHHHhcCCChh
Confidence 99999999999999999999987 579999999999999999875544
No 6
>PLN02998 beta-glucosidase
Probab=100.00 E-value=6.6e-98 Score=827.95 Aligned_cols=377 Identities=25% Similarity=0.394 Sum_probs=319.1
Q ss_pred cCCccccccccccccccCCCCcccccCCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHH
Q 006252 165 VPTENEEVHHKVTAWHNVPHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWII 244 (654)
Q Consensus 165 ~~~~~~~~~~~~~~~~n~~~pe~a~~~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lI 244 (654)
.+|+||.|+| ++ .....++++||+|||+|+|||+|||+||+++|||||+||||+|++ .|.||++||+||++||
T Consensus 56 g~siwD~~~~-~~-~~~~~~~~~a~D~Yhry~EDi~lmk~lG~~~YRfSIsWsRI~P~G-----~g~vN~~gl~~Y~~li 128 (497)
T PLN02998 56 TPSIWDVFAH-AG-HSGVAAGNVACDQYHKYKEDVKLMADMGLEAYRFSISWSRLLPSG-----RGPINPKGLQYYNNLI 128 (497)
T ss_pred ccchhhcccc-cC-cCCCCCCcccccHHHhhHHHHHHHHHcCCCeEEeeccHHhcCcCC-----CCCcCHHHHHHHHHHH
Confidence 7899999998 44 222257899999999999999999999999999999999999986 3679999999999999
Q ss_pred HHHHHcCCeEEEEeccCCCcccccc-cCCCCChhhHHHHHHHHHHHHHHhCCccceEEEccCcceeeeccccCCCCCCCC
Q 006252 245 NRVRSYGMKVMLTLFHHSLPAWAGE-YGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCMLTYCAGTWPGGN 323 (654)
Q Consensus 245 d~L~~~GI~PiVTL~HwDLP~wL~~-~GGW~n~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPnv~~~~GY~~G~~pPg~ 323 (654)
++|+++||+|||||||||||+||++ +|||+|++++++|++||++||++||||||+|+|||||++++..||..|.+||+.
T Consensus 129 d~L~~~GIeP~VTL~H~dlP~~L~~~yGGW~n~~~v~~F~~YA~~~~~~fgdrVk~WiT~NEP~~~~~~gy~~G~~~Pg~ 208 (497)
T PLN02998 129 DELITHGIQPHVTLHHFDLPQALEDEYGGWLSQEIVRDFTAYADTCFKEFGDRVSHWTTINEVNVFALGGYDQGITPPAR 208 (497)
T ss_pred HHHHHcCCceEEEecCCCCCHHHHHhhCCcCCchHHHHHHHHHHHHHHHhcCcCCEEEEccCcchhhhcchhhcccCCCc
Confidence 9999999999999999999999987 599999999999999999999999999999999999999999999999999985
Q ss_pred CChhh--hhhc-CCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeeccccCCCC--cccHHHHHHHhccc--
Q 006252 324 PDMLE--VATS-ALPTGVFNQAMHWMAIAHSKAYDYIHAKSSTSTKSKVGVAHHVSFMRPYG--LFDVTAVTLANTLT-- 396 (654)
Q Consensus 324 ~~~~~--~~~~-~~~~~~~~~a~hnLLlAHA~Ay~~ir~~~~~~q~g~IGi~~~~~~~~P~~--~~D~~aa~~~n~l~-- 396 (654)
+.... .+.. ...... .+++||+++||++||++||+.++..+.++||++++..+++|.+ +.|+.++.+.+.+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~-~~~~hn~llAHa~A~~~~~~~~~~~~~g~IGi~~~~~~~~P~~~~~~D~~aa~~~~~~~~~ 287 (497)
T PLN02998 209 CSPPFGLNCTKGNSSIEP-YIAVHNMLLAHASATILYKQQYKYKQHGSVGISVYTYGAVPLTNSVKDKQATARVNDFYIG 287 (497)
T ss_pred cccccccccccccchHHH-HHHHHHHHHHHHHHHHHHHHhhccCCCCcEEEEEeCCeeecCCCCHHHHHHHHHHHHHHhh
Confidence 43100 0000 001123 4899999999999999999986545678999999999999985 56888775543211
Q ss_pred --C-------Cc------------c-----ccccCCCcceeEeeccCcceeeCCCCc--c-cC---C---------CCcc
Q 006252 397 --T-------FP------------Y-----VDSISDRLDFIGINYYGQEVVSGPGLK--L-VE---T---------DEYS 435 (654)
Q Consensus 397 --~-------~p------------~-----~d~I~~~~DFiGINyYt~~~V~~~~~~--~-~~---~---------~~~s 435 (654)
. +| . .+.|++++||+|||||++.+|+..... . .. . ...+
T Consensus 288 ~f~dp~~~G~YP~~~~~~l~~~lp~~t~~d~~~i~~~~DFlGiNyYts~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (497)
T PLN02998 288 WILHPLVFGDYPETMKTNVGSRLPAFTEEESEQVKGAFDFVGVINYMALYVKDNSSSLKPNLQDFNTDIAVEMTLVGNTS 367 (497)
T ss_pred hhhhHHhCCCcCHHHHHHHhcCCCCCCHHHHHHhcCCCCEEEEchhcCcccccCCCcCCCCccccccccccccccCCCcC
Confidence 1 11 1 123678999999999999988641100 0 00 0 0122
Q ss_pred -cCCcccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCCC-----CccccHHHHHHHHHHHHHHHHcCCCeeEEEEeecc
Q 006252 436 -ESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDE-----TDLIRRPYVIEHLLAVYAAMITGVPVIGYLFWTIS 509 (654)
Q Consensus 436 -~~G~~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad~-----~D~~Ri~YL~~hL~~v~kAi~dGV~V~GY~~WSLl 509 (654)
.+||+++|+||+.+|++++++|+ ++||||||||+++. +|..|++||++||.+|++||++||||+||++|||+
T Consensus 368 ~~~~w~i~P~Gl~~~L~~~~~rY~--~ppI~ITENG~~~~~~g~v~D~~Ri~Yl~~hl~~~~kAi~dGv~V~GY~~WSl~ 445 (497)
T PLN02998 368 IENEYANTPWSLQQILLYVKETYG--NPPVYILENGQMTPHSSSLVDTTRVKYLSSYIKAVLHSLRKGSDVKGYFQWSLM 445 (497)
T ss_pred CCCCCEEChHHHHHHHHHHHHHcC--CCCEEEeCCCCccCCCCcccCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccch
Confidence 37899999999999999999997 46899999999853 48899999999999999999999999999999999
Q ss_pred cccCCCCCCCCccceEEEcCCC-CccccccchHHHHHHHHHcC
Q 006252 510 DNWEWADGYGPKFGLVAVDRAN-NLARIPRPSYHLFTKVVTTG 551 (654)
Q Consensus 510 DNfEW~~GY~~RFGL~~VD~~~-~l~R~PK~Sa~wY~~ii~~~ 551 (654)
|||||.+||++||||++||+++ +++|+||+|++||+++|+++
T Consensus 446 DnfEW~~Gy~~RfGLv~VD~~~~~~~R~pK~S~~wy~~ii~~~ 488 (497)
T PLN02998 446 DVFELFGGYERSFGLLYVDFKDPSLKRSPKLSAHWYSSFLKGT 488 (497)
T ss_pred hhhchhccccCccceEEECCCCCCcceecccHHHHHHHHHhcc
Confidence 9999999999999999999986 58999999999999999976
No 7
>PRK09593 arb 6-phospho-beta-glucosidase; Reviewed
Probab=100.00 E-value=3.4e-96 Score=812.06 Aligned_cols=370 Identities=26% Similarity=0.442 Sum_probs=314.5
Q ss_pred cCCccccccccccccc--c----------C--CCCcccccCCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCcc
Q 006252 165 VPTENEEVHHKVTAWH--N----------V--PHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKE 230 (654)
Q Consensus 165 ~~~~~~~~~~~~~~~~--n----------~--~~pe~a~~~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g 230 (654)
.||+||.|+|.++++. + + .+++.||+|||+|+|||+|||+||+++|||||+||||+|+| ..+
T Consensus 31 g~siwD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~d~Yhry~eDi~Lm~~lG~~aYRfSIsWsRI~P~G----~~~ 106 (478)
T PRK09593 31 GLANVDVVPIGEDRFPIITGEKKMFDFEEGYFYPAKEAIDMYHHYKEDIALFAEMGFKTYRMSIAWTRIFPKG----DEL 106 (478)
T ss_pred ccchhhccccCcCcccccccccccccccccccCCCCcccchHHhhHHHHHHHHHcCCCEEEEecchhhcccCC----CCC
Confidence 7899999999887762 1 1 26899999999999999999999999999999999999985 235
Q ss_pred ccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccc-cCCCCChhhHHHHHHHHHHHHHHhCCccceEEEccCccee
Q 006252 231 TVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGE-YGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVF 309 (654)
Q Consensus 231 ~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~-~GGW~n~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPnv~ 309 (654)
.+|++||+||++||++|+++||+|||||||||||+||++ +|||+|++++++|++||++||++|||+|++|+|||||+++
T Consensus 107 ~~N~~gl~~Y~~lId~L~~~GI~P~VTL~H~dlP~~L~~~~GGW~n~~~v~~F~~YA~~~~~~fgdrVk~WiT~NEP~~~ 186 (478)
T PRK09593 107 EPNEAGLQFYEDIFKECHKYGIEPLVTITHFDCPMHLIEEYGGWRNRKMVGFYERLCRTLFTRYKGLVKYWLTFNEINMI 186 (478)
T ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEEEecccCCCHHHHhhcCCCCChHHHHHHHHHHHHHHHHhcCcCCEEEeecchhhh
Confidence 699999999999999999999999999999999999986 5999999999999999999999999999999999999999
Q ss_pred eecccc-CCCC-CCCCCChhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeeccccCCCC--ccc
Q 006252 310 CMLTYC-AGTW-PGGNPDMLEVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSSTSTKSKVGVAHHVSFMRPYG--LFD 385 (654)
Q Consensus 310 ~~~GY~-~G~~-pPg~~~~~~~~~~~~~~~~~~~a~hnLLlAHA~Ay~~ir~~~~~~q~g~IGi~~~~~~~~P~~--~~D 385 (654)
+..||. .|.+ |||.... ....+++||+|+||++|+++||+.. +.++||++++..+++|.+ +.|
T Consensus 187 ~~~~~~~~g~~~~~g~~~~----------~~~~~a~h~~llAHa~A~~~~~~~~---~~g~VGi~~~~~~~~P~~~~~~D 253 (478)
T PRK09593 187 LHAPFMGAGLYFEEGENKE----------QVKYQAAHHELVASAIATKIAHEVD---PENKVGCMLAAGQYYPNTCHPED 253 (478)
T ss_pred hcccccccCcccCCCCchh----------hhHHHHHHHHHHHHHHHHHHHHHhC---CCCeEEEEEeCCeeEeCCCCHHH
Confidence 988886 5543 6653211 1134899999999999999999865 457899999999999975 678
Q ss_pred HHHHHHHhc---ccC-------Cc--------------cc-----ccc-CCCcceeEeeccCcceeeCCCC---------
Q 006252 386 VTAVTLANT---LTT-------FP--------------YV-----DSI-SDRLDFIGINYYGQEVVSGPGL--------- 426 (654)
Q Consensus 386 ~~aa~~~n~---l~~-------~p--------------~~-----d~I-~~~~DFiGINyYt~~~V~~~~~--------- 426 (654)
+.|+.+.+. ++. +| .+ +.| ++++||||||||++.+|+....
T Consensus 254 ~~aa~~~~~~~~~fld~~~~G~YP~~~~~~~~~~~~~~~~~~~d~~~ik~g~~DFlGiNyYt~~~v~~~~~~~~~~~~~~ 333 (478)
T PRK09593 254 VWAAMKEDRENYFFIDVQARGEYPNYAKKRFEREGITIEMTEEDLELLKENTVDFISFSYYSSRVASGDPKVNEKTAGNI 333 (478)
T ss_pred HHHHHHHHHHhhhhhhhhhCCCccHHHHHHHHhcCCCCCCCHHHHHHHhcCCCCEEEEecccCcccccCCCCCCCCCCCc
Confidence 887754321 111 11 00 124 3889999999999999874210
Q ss_pred -cccCCC--CcccCCcccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCC---------CCccccHHHHHHHHHHHHHHH
Q 006252 427 -KLVETD--EYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSD---------ETDLIRRPYVIEHLLAVYAAM 494 (654)
Q Consensus 427 -~~~~~~--~~s~~G~~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad---------~~D~~Ri~YL~~hL~~v~kAi 494 (654)
....++ +.+++||+|+|+||+.+|++++++|+ .||||||||++. .+|..|+.||++||.+|++||
T Consensus 334 ~~~~~~p~~~~~~~gw~i~P~Gl~~~l~~~~~~Y~---~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~yl~~hl~~~~~Ai 410 (478)
T PRK09593 334 FASLKNPYLKASEWGWQIDPLGLRITLNTIWDRYQ---KPMFIVENGLGAVDKPDENGYVEDDYRIDYLAAHIKAMRDAI 410 (478)
T ss_pred cccccCCCcccCCCCCEECHHHHHHHHHHHHHHcC---CCEEEEcCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHH
Confidence 001112 35779999999999999999999996 589999999983 248899999999999999999
Q ss_pred H-cCCCeeEEEEeecccccCCCCC-CCCccceEEEcCCC----CccccccchHHHHHHHHHcCCCC
Q 006252 495 I-TGVPVIGYLFWTISDNWEWADG-YGPKFGLVAVDRAN----NLARIPRPSYHLFTKVVTTGKVT 554 (654)
Q Consensus 495 ~-dGV~V~GY~~WSLlDNfEW~~G-Y~~RFGL~~VD~~~----~l~R~PK~Sa~wY~~ii~~~~i~ 554 (654)
+ +||+|+||++|||+|||||..| |++||||++||+++ +++|+||+|++||+++|++++.+
T Consensus 411 ~~dGv~v~GY~~WSl~Dn~EW~~G~y~~RfGl~~VD~~~~~~~~~~R~pK~S~~wy~~ii~~~~~~ 476 (478)
T PRK09593 411 NEDGVELLGYTTWGCIDLVSAGTGEMKKRYGFIYVDRDNEGKGTLKRSKKKSFDWYKKVIASNGED 476 (478)
T ss_pred HHcCCCEEEEeeccchHhhcccCCCccCeeceEEECCCCCCCcccceecccHHHHHHHHHHhCCcC
Confidence 5 9999999999999999999999 99999999999986 58999999999999999987764
No 8
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A ....
Probab=100.00 E-value=3.2e-97 Score=816.59 Aligned_cols=370 Identities=34% Similarity=0.619 Sum_probs=312.7
Q ss_pred cCCccccccccccccccCCCCcccccCCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHH
Q 006252 165 VPTENEEVHHKVTAWHNVPHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWII 244 (654)
Q Consensus 165 ~~~~~~~~~~~~~~~~n~~~pe~a~~~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lI 244 (654)
.+|+||.|+|.++++.++.+++.||+|||+|+|||+|||+||+++|||||+|+||+|+| ..|.+|++|++||+++|
T Consensus 30 g~s~wd~~~~~~~~~~~~~~~~~a~d~y~~y~eDi~l~~~lg~~~yRfsi~W~Ri~P~g----~~g~~n~~~~~~Y~~~i 105 (455)
T PF00232_consen 30 GPSIWDTFCHEPGKVEDGSTGDVACDHYHRYKEDIALMKELGVNAYRFSISWSRIFPDG----FEGKVNEEGLDFYRDLI 105 (455)
T ss_dssp TTBHHHHHHHSTTSSTTSSSSSSTTGHHHHHHHHHHHHHHHT-SEEEEE--HHHHSTTS----SSSSS-HHHHHHHHHHH
T ss_pred CcccccccccccceeeccccCcccccchhhhhHHHHHHHhhccceeeeecchhheeecc----cccccCHhHhhhhHHHH
Confidence 68999999999999999999999999999999999999999999999999999999985 35899999999999999
Q ss_pred HHHHHcCCeEEEEeccCCCcccccccCCCCChhhHHHHHHHHHHHHHHhCCccceEEEccCcceeeeccccCCCCCCCCC
Q 006252 245 NRVRSYGMKVMLTLFHHSLPAWAGEYGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCMLTYCAGTWPGGNP 324 (654)
Q Consensus 245 d~L~~~GI~PiVTL~HwDLP~wL~~~GGW~n~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPnv~~~~GY~~G~~pPg~~ 324 (654)
++|+++||+|||||||||+|+||+++|||+|++++++|++||++||++|||+|++|+|||||++++..||..|.+||+..
T Consensus 106 ~~l~~~gi~P~vtL~H~~~P~~l~~~ggw~~~~~~~~F~~Ya~~~~~~~gd~V~~w~T~NEp~~~~~~~y~~g~~~p~~~ 185 (455)
T PF00232_consen 106 DELLENGIEPIVTLYHFDLPLWLEDYGGWLNRETVDWFARYAEFVFERFGDRVKYWITFNEPNVFALLGYLYGGFPPGRD 185 (455)
T ss_dssp HHHHHTT-EEEEEEESS--BHHHHHHTGGGSTHHHHHHHHHHHHHHHHHTTTBSEEEEEETHHHHHHHHHTSSSSTTCSS
T ss_pred HHHHhhccceeeeeeecccccceeecccccCHHHHHHHHHHHHHHHHHhCCCcceEEeccccceeecccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999955
Q ss_pred ChhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeeccccCCCCc--ccH-HHHHHHhccc-----
Q 006252 325 DMLEVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSSTSTKSKVGVAHHVSFMRPYGL--FDV-TAVTLANTLT----- 396 (654)
Q Consensus 325 ~~~~~~~~~~~~~~~~~a~hnLLlAHA~Ay~~ir~~~~~~q~g~IGi~~~~~~~~P~~~--~D~-~aa~~~n~l~----- 396 (654)
+.. ...+++|||++||++||++||+..+ .++||++++..+++|.+. .|. .|+.+.+.+.
T Consensus 186 ~~~----------~~~~~~h~~l~AHa~A~~~~~~~~~---~~~IGi~~~~~~~~P~~~~~~d~~~Aa~~~~~~~n~~f~ 252 (455)
T PF00232_consen 186 SLK----------AFYQAAHNLLLAHAKAVKAIKEKYP---DGKIGIALNFSPFYPLSPSPEDDVAAAERADEFHNGWFL 252 (455)
T ss_dssp THH----------HHHHHHHHHHHHHHHHHHHHHHHTC---TSEEEEEEEEEEEEESSSSHHHHHHHHHHHHHHHTHHHH
T ss_pred ccc----------hhhHHHhhHHHHHHHHHHHHhhccc---ceEEeccccccccCCCCccchhhHHHHHHHHHHhhcccc
Confidence 432 2348999999999999999999884 578999999999999863 333 5554432211
Q ss_pred ------CC--------------cc-----ccccCCCcceeEeeccCcceeeCCCCcc----------c-----CCCCccc
Q 006252 397 ------TF--------------PY-----VDSISDRLDFIGINYYGQEVVSGPGLKL----------V-----ETDEYSE 436 (654)
Q Consensus 397 ------~~--------------p~-----~d~I~~~~DFiGINyYt~~~V~~~~~~~----------~-----~~~~~s~ 436 (654)
.+ |. .+.|++++||+|||||++.+|+...... . +..+.++
T Consensus 253 dpi~~G~YP~~~~~~~~~~~~lp~ft~ed~~~ikg~~DFlGiNYYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 332 (455)
T PF00232_consen 253 DPIFKGDYPEEMKEYLGERGILPEFTEEDKELIKGSIDFLGINYYTSRYVRADPNPSSPPSYDSDAPFGQPYNPGGPTTD 332 (455)
T ss_dssp HHHHHSSSEHHHHHHHGGGTSSTTSGHHHHHHHTTTTSEEEEEESEEEEEEESSSSTSSTTHEEEESEEEECETSSEBCT
T ss_pred cCchhhcCChHHhhccccccccccccchhhhcccccchhhhhccccceeeccCccccccccccCCccccccccccccccc
Confidence 11 11 1235899999999999999987543110 0 0113578
Q ss_pred CCcccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCCCC--------ccccHHHHHHHHHHHHHHHHcCCCeeEEEEeec
Q 006252 437 SGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDET--------DLIRRPYVIEHLLAVYAAMITGVPVIGYLFWTI 508 (654)
Q Consensus 437 ~G~~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad~~--------D~~Ri~YL~~hL~~v~kAi~dGV~V~GY~~WSL 508 (654)
+||.++|+||+.+|++++++|+ ++||||||||+++.+ |..|+.||++||.+|++||+|||||+||++|||
T Consensus 333 ~gw~i~P~Gl~~~L~~l~~~Y~--~~pI~ITENG~~~~~~~~~~~v~D~~Ri~yl~~hl~~v~~Ai~dGv~V~GY~~WSl 410 (455)
T PF00232_consen 333 WGWEIYPEGLRDVLRYLKDRYG--NPPIYITENGIGDPDEVDDGKVDDDYRIDYLQDHLNQVLKAIEDGVNVRGYFAWSL 410 (455)
T ss_dssp TSTBBETHHHHHHHHHHHHHHT--SSEEEEEEE---EETTCTTSHBSHHHHHHHHHHHHHHHHHHHHTT-EEEEEEEETS
T ss_pred cCcccccchHhhhhhhhccccC--CCcEEEecccccccccccccCcCcHHHHHHHHHHHHHHHhhhccCCCeeeEeeecc
Confidence 9999999999999999999998 599999999999643 889999999999999999999999999999999
Q ss_pred ccccCCCCCCCCccceEEEcCCCCccccccchHHHHHHHHHcCCC
Q 006252 509 SDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTTGKV 553 (654)
Q Consensus 509 lDNfEW~~GY~~RFGL~~VD~~~~l~R~PK~Sa~wY~~ii~~~~i 553 (654)
||||||.+||++||||++||+.++++|+||+|++||+++|++|++
T Consensus 411 ~Dn~Ew~~Gy~~rfGl~~VD~~~~~~R~pK~S~~~y~~~i~~ng~ 455 (455)
T PF00232_consen 411 LDNFEWAEGYKKRFGLVYVDFFDTLKRTPKKSAYWYKDFIRSNGF 455 (455)
T ss_dssp B---BGGGGGGSE--SEEEETTTTTEEEEBHHHHHHHHHHHHTEE
T ss_pred ccccccccCccCccCceEEcCCCCcCeeeccHHHHHHHHHHhcCC
Confidence 999999999999999999997678999999999999999999864
No 9
>PRK09589 celA 6-phospho-beta-glucosidase; Reviewed
Probab=100.00 E-value=2.5e-95 Score=804.80 Aligned_cols=369 Identities=26% Similarity=0.428 Sum_probs=310.5
Q ss_pred cCCcccccc---c-ccccccc----C--CCCcccccCCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccCh
Q 006252 165 VPTENEEVH---H-KVTAWHN----V--PHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNF 234 (654)
Q Consensus 165 ~~~~~~~~~---~-~~~~~~n----~--~~pe~a~~~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~ 234 (654)
.||+||.|+ | .++++.+ + ++++.||+|||+|+|||+|||+||+++|||||+||||+|+| ..+.+|+
T Consensus 29 g~siwD~~~~~~~~~~~~~~~~~~~~~~~~~~~a~D~Yhry~eDi~Lm~~lG~~~yRfSIsWsRI~P~G----~~~~~N~ 104 (476)
T PRK09589 29 GISVADVMTAGAHGVPREITEGVIEGKNYPNHEAIDFYHRYKEDIALFAEMGFKCFRTSIAWTRIFPQG----DELEPNE 104 (476)
T ss_pred CCchhcccccccccCccccccCccCCCcCCCcccccHHHhhHHHHHHHHHcCCCEEEeccchhhcCcCC----CCCCCCH
Confidence 789999999 4 4666532 2 25789999999999999999999999999999999999985 2356999
Q ss_pred hHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccc-cCCCCChhhHHHHHHHHHHHHHHhCCccceEEEccCcceeeec-
Q 006252 235 AALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGE-YGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCML- 312 (654)
Q Consensus 235 ~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~-~GGW~n~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPnv~~~~- 312 (654)
+||+||++||++|+++||+|||||||||||+||++ +|||+|++++++|++||++||++|||+||+|+|||||++++..
T Consensus 105 ~gl~~Y~~lid~L~~~GI~P~VTL~H~dlP~~L~~~yGGW~n~~~i~~F~~YA~~~f~~fgdrVk~WiT~NEp~~~~~~~ 184 (476)
T PRK09589 105 EGLQFYDDLFDECLKQGIEPVVTLSHFEMPYHLVTEYGGWRNRKLIDFFVRFAEVVFTRYKDKVKYWMTFNEINNQANFS 184 (476)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEecCCCCCHHHHHhcCCcCChHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhhhccc
Confidence 99999999999999999999999999999999987 5999999999999999999999999999999999999998776
Q ss_pred ----ccc-CCC-CCCCCCChhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeeccccCCCC--cc
Q 006252 313 ----TYC-AGT-WPGGNPDMLEVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSSTSTKSKVGVAHHVSFMRPYG--LF 384 (654)
Q Consensus 313 ----GY~-~G~-~pPg~~~~~~~~~~~~~~~~~~~a~hnLLlAHA~Ay~~ir~~~~~~q~g~IGi~~~~~~~~P~~--~~ 384 (654)
||. .|. +|||... . ....+++||+++||++|+++||+..+ .++||++++..+++|.+ +.
T Consensus 185 ~~~~~~~~~g~~~~pg~~~---------~-~~~~~~~h~~llAha~A~~~~~~~~~---~~~iG~~~~~~~~~P~~~~~~ 251 (476)
T PRK09589 185 EDFAPFTNSGILYSPGEDR---------E-QIMYQAAHYELVASALAVKTGHEINP---DFQIGCMIAMCPIYPLTCAPN 251 (476)
T ss_pred cccCCccccccccCCCCch---------h-HHHHHHHHHHHHHHHHHHHHHHHhCC---CCcEEEEEeCCeeeeCCCCHH
Confidence 444 444 2555311 1 12348999999999999999999764 46799999999999975 57
Q ss_pred cHHHHHHHhccc---C-------Cc--------------cc-----ccc-CCCcceeEeeccCcceeeCC--CC------
Q 006252 385 DVTAVTLANTLT---T-------FP--------------YV-----DSI-SDRLDFIGINYYGQEVVSGP--GL------ 426 (654)
Q Consensus 385 D~~aa~~~n~l~---~-------~p--------------~~-----d~I-~~~~DFiGINyYt~~~V~~~--~~------ 426 (654)
|+.|+.+.+.+. . +| .+ +.+ ++++||||||||++.+|+.. ..
T Consensus 252 d~~aa~~~~~~~~~f~d~~~~G~YP~~~~~~~~~~~~~~~~t~~d~~~l~~g~~DFlGiNyYts~~v~~~~~~~~~~~~~ 331 (476)
T PRK09589 252 DMMMATKAMHRRYWFTDVHVRGYYPQHILNYFARKGFNLDITPEDNAILAEGCVDYIGFSYYMSFATKFHEDNPQLDYVE 331 (476)
T ss_pred HHHHHHHHHHhccceecceeCCCCcHHHHHHHHhcCCCCCCCHHHHHHHhcCCCCEEEEecccCcccccCCCCCCCCccc
Confidence 888876543211 0 11 00 113 57899999999999988631 10
Q ss_pred --cccCCC--CcccCCcccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCC---------CCccccHHHHHHHHHHHHHH
Q 006252 427 --KLVETD--EYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSD---------ETDLIRRPYVIEHLLAVYAA 493 (654)
Q Consensus 427 --~~~~~~--~~s~~G~~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad---------~~D~~Ri~YL~~hL~~v~kA 493 (654)
..+.++ +.+++||+|+|+||+.+|++++++|+ .||||||||++. .+|..|+.||++||.+|++|
T Consensus 332 ~~~~~~~~~~~~~~~gw~i~P~Gl~~~L~~~~~~Y~---~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~Yl~~hl~~~~~A 408 (476)
T PRK09589 332 TRDLVSNPYVKASEWGWQIDPAGLRYSLNWFWDHYQ---LPLFIVENGFGAIDQREADGTVNDHYRIDYLAAHIREMKKA 408 (476)
T ss_pred ccccccCCCcccCCCCCccCcHHHHHHHHHHHHhcC---CCEEEEeCCcccCCCCCcCCcccCHHHHHHHHHHHHHHHHH
Confidence 011122 45779999999999999999999996 689999999983 24889999999999999999
Q ss_pred H-HcCCCeeEEEEeecccccCCCCC-CCCccceEEEcCCC----CccccccchHHHHHHHHHcCCC
Q 006252 494 M-ITGVPVIGYLFWTISDNWEWADG-YGPKFGLVAVDRAN----NLARIPRPSYHLFTKVVTTGKV 553 (654)
Q Consensus 494 i-~dGV~V~GY~~WSLlDNfEW~~G-Y~~RFGL~~VD~~~----~l~R~PK~Sa~wY~~ii~~~~i 553 (654)
| ++||||+||++|||+|||||.+| |++||||++||+++ +++|+||+|++||+++|++++.
T Consensus 409 i~~dGv~V~GY~~WSl~Dn~Ew~~G~y~~RfGlv~VD~~~~~~~t~~R~pK~S~~wy~~~i~~ng~ 474 (476)
T PRK09589 409 VVEDGVDLMGYTPWGCIDLVSAGTGEMKKRYGFIYVDKDNEGKGTLERSRKKSFYWYRDVIANNGE 474 (476)
T ss_pred HHhcCCCeEEEeeccccccccccCCccccceeeEEEcCCCCCCcccccccccHHHHHHHHHHhcCC
Confidence 9 89999999999999999999999 99999999999986 5799999999999999998754
No 10
>COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-95 Score=791.52 Aligned_cols=368 Identities=34% Similarity=0.601 Sum_probs=325.6
Q ss_pred cCCccccccc--cccccccCCCCcccccCCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHH
Q 006252 165 VPTENEEVHH--KVTAWHNVPHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKW 242 (654)
Q Consensus 165 ~~~~~~~~~~--~~~~~~n~~~pe~a~~~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~ 242 (654)
.+|.||.+.| -++.+..+..|++|++|||+|+|||+|||+||+++|||||+||||+|.+ ..+.+|++||+||++
T Consensus 29 g~s~wD~~~~~~~~~~~~~~~~~~~a~d~YhrYkeDi~L~~emG~~~~R~SI~WsRIfP~g----~~~e~N~~gl~fY~~ 104 (460)
T COG2723 29 GPSDWDVWVHDEIPGRLVSGDPPEEASDFYHRYKEDIALAKEMGLNAFRTSIEWSRIFPNG----DGGEVNEKGLRFYDR 104 (460)
T ss_pred CCeeeeeeeccccCCcccCCCCCccccchhhhhHHHHHHHHHcCCCEEEeeeeEEEeecCC----CCCCcCHHHHHHHHH
Confidence 7899999999 6899999999999999999999999999999999999999999999986 234899999999999
Q ss_pred HHHHHHHcCCeEEEEeccCCCccccccc-CCCCChhhHHHHHHHHHHHHHHhCCccceEEEccCcceeeeccccCCCCCC
Q 006252 243 IINRVRSYGMKVMLTLFHHSLPAWAGEY-GGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCMLTYCAGTWPG 321 (654)
Q Consensus 243 lId~L~~~GI~PiVTL~HwDLP~wL~~~-GGW~n~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPnv~~~~GY~~G~~pP 321 (654)
|||+|+++||+|+|||||||||+||++. |||+|+++|+.|++||++||++|||+||+|+||||||+++..||..|.+||
T Consensus 105 l~del~~~gIep~vTL~Hfd~P~~L~~~ygGW~nR~~i~~F~~ya~~vf~~f~dkVk~W~TFNE~n~~~~~~y~~~~~~p 184 (460)
T COG2723 105 LFDELKARGIEPFVTLYHFDLPLWLQKPYGGWENRETVDAFARYAATVFERFGDKVKYWFTFNEPNVVVELGYLYGGHPP 184 (460)
T ss_pred HHHHHHHcCCEEEEEecccCCcHHHhhccCCccCHHHHHHHHHHHHHHHHHhcCcceEEEEecchhhhhcccccccccCC
Confidence 9999999999999999999999999886 899999999999999999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeeccccCCCC--cccHHHHHHHhcccC--
Q 006252 322 GNPDMLEVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSSTSTKSKVGVAHHVSFMRPYG--LFDVTAVTLANTLTT-- 397 (654)
Q Consensus 322 g~~~~~~~~~~~~~~~~~~~a~hnLLlAHA~Ay~~ir~~~~~~q~g~IGi~~~~~~~~P~~--~~D~~aa~~~n~l~~-- 397 (654)
+..+. ....||+||+++|||+|++++|+..++. +||++++..+.+|.+ +.|+.|+..++.+..
T Consensus 185 ~~~~~----------~~~~qa~hh~~lA~A~avk~~~~~~~~~---kIG~~~~~~p~YP~s~~p~dv~aA~~~~~~~n~~ 251 (460)
T COG2723 185 GIVDP----------KAAYQVAHHMLLAHALAVKAIKKINPKG---KVGIILNLTPAYPLSDKPEDVKAAENADRFHNRF 251 (460)
T ss_pred CccCH----------HHHHHHHHHHHHHHHHHHHHHHhhCCcC---ceEEEeccCcCCCCCCCHHHHHHHHHHHHHhhhh
Confidence 87653 2335999999999999999999988752 699999999999997 678988886654332
Q ss_pred ---------Ccc-----c--------------cccC-CCcceeEeeccCccee-eCCCC-----------cccCC--CCc
Q 006252 398 ---------FPY-----V--------------DSIS-DRLDFIGINYYGQEVV-SGPGL-----------KLVET--DEY 434 (654)
Q Consensus 398 ---------~p~-----~--------------d~I~-~~~DFiGINyYt~~~V-~~~~~-----------~~~~~--~~~ 434 (654)
+|. + +.++ ++.||||+|||++..+ +.... ..+.+ .+.
T Consensus 252 FlD~~~~G~yp~~~~~~~~~~~~~~~~~~~Dl~~lk~~~~DfiG~NYY~~s~v~~~~~~~~~~~~~~~~~~~~~~p~~~~ 331 (460)
T COG2723 252 FLDAQVKGEYPEYLEKELEENGILPEIEDGDLEILKENTVDFIGLNYYTPSRVKAAEPRYVSGYGPGGFFTSVPNPGLEV 331 (460)
T ss_pred hcchhhcCcCCHHHHHHHHhcCCCcccCcchHHHHhcCCCCeEEEeeeeeeeEeeccCCcCCcccccccccccCCCCCcc
Confidence 120 0 1123 3589999999995444 32211 11222 256
Q ss_pred ccCCcccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCC--------CCccccHHHHHHHHHHHHHHHHcCCCeeEEEEe
Q 006252 435 SESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSD--------ETDLIRRPYVIEHLLAVYAAMITGVPVIGYLFW 506 (654)
Q Consensus 435 s~~G~~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad--------~~D~~Ri~YL~~hL~~v~kAi~dGV~V~GY~~W 506 (654)
+++||+|||+||+.+|.++++||+ +||||||||++. .+|+.||+||++||.+|++||++||+|+||++|
T Consensus 332 sdwGWeI~P~GL~~~l~~~~~rY~---~p~fItENG~G~~d~~~~~~i~DdyRI~Yl~~Hl~~v~~AI~dGv~v~GY~~W 408 (460)
T COG2723 332 SDWGWEIYPKGLYDILEKLYERYG---IPLFITENGLGVKDEVDFDGINDDYRIDYLKEHLKAVKKAIEDGVDVRGYFAW 408 (460)
T ss_pred cCCCceeChHHHHHHHHHHHHHhC---CCeEEecCCCCcccccccCCcCchHHHHHHHHHHHHHHHHHHcCCCcccceec
Confidence 799999999999999999999996 899999999872 268999999999999999999999999999999
Q ss_pred ecccccCCCCCCCCccceEEEcCCCCccccccchHHHHHHHHHcCC
Q 006252 507 TISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTTGK 552 (654)
Q Consensus 507 SLlDNfEW~~GY~~RFGL~~VD~~~~l~R~PK~Sa~wY~~ii~~~~ 552 (654)
|++||+||.+||++||||++||++++++|+||+|++||+++|++|+
T Consensus 409 s~iD~~sw~~gy~kRYGli~VD~~~~~~R~~KkS~~WyK~vi~sng 454 (460)
T COG2723 409 SLIDNYSWANGYKKRYGLVYVDYDTDLERTPKKSFYWYKEVIESNG 454 (460)
T ss_pred ccccccchhhccccccccEEEcccccceeeecCceeeeHHHHhcCC
Confidence 9999999999999999999999987689999999999999999988
No 11
>PRK15014 6-phospho-beta-glucosidase BglA; Provisional
Probab=100.00 E-value=6.6e-94 Score=793.34 Aligned_cols=369 Identities=25% Similarity=0.455 Sum_probs=312.4
Q ss_pred cCCcccccc---c-cccccc----cC--CCCcccccCCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccCh
Q 006252 165 VPTENEEVH---H-KVTAWH----NV--PHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNF 234 (654)
Q Consensus 165 ~~~~~~~~~---~-~~~~~~----n~--~~pe~a~~~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~ 234 (654)
.||+||.|+ | .++++. .+ .++++||+|||+|+|||+|||+||+++|||||+||||+|++ ..+.+|+
T Consensus 31 g~siwD~~~~~~~~~~~~~~~~~~~~~~~~~~~A~D~Yhry~EDI~Lm~elG~~~yRfSIsWsRI~P~G----~~~~~N~ 106 (477)
T PRK15014 31 GPSICDVLTGGAHGVPREITKEVVPGKYYPNHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKG----DEAQPNE 106 (477)
T ss_pred cccHhhccccccccCccccccccccCCcCCCCcccCcccccHHHHHHHHHcCCCEEEecccceeeccCC----CCCCCCH
Confidence 779999999 4 456552 22 36789999999999999999999999999999999999985 2356999
Q ss_pred hHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccc-cCCCCChhhHHHHHHHHHHHHHHhCCccceEEEccCccee----
Q 006252 235 AALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGE-YGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVF---- 309 (654)
Q Consensus 235 ~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~-~GGW~n~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPnv~---- 309 (654)
+|++||+++|++|+++||+|||||||||+|+||++ +|||+|++++++|++||++||++|||+|++|+|||||+++
T Consensus 107 ~gl~~Y~~lid~l~~~GI~P~vTL~H~dlP~~L~~~yGGW~n~~~~~~F~~Ya~~~f~~fgdrVk~WiT~NEp~~~~~~~ 186 (477)
T PRK15014 107 EGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNEINNQRNWR 186 (477)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEeeCCCCCHHHHHhcCCCCChHHHHHHHHHHHHHHHHhcCcCCEEEEecCcccccccc
Confidence 99999999999999999999999999999999987 5999999999999999999999999999999999999987
Q ss_pred -eeccccC-CCC-CCCCCChhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeeccccCCCC--cc
Q 006252 310 -CMLTYCA-GTW-PGGNPDMLEVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSSTSTKSKVGVAHHVSFMRPYG--LF 384 (654)
Q Consensus 310 -~~~GY~~-G~~-pPg~~~~~~~~~~~~~~~~~~~a~hnLLlAHA~Ay~~ir~~~~~~q~g~IGi~~~~~~~~P~~--~~ 384 (654)
++.||.. |.+ ||+.. . . ....+++||+++||++|+++||+..+ .++||++++..+++|.+ +.
T Consensus 187 ~~~~gy~~~g~~~~~~~~-~--------~-~~~~~~~h~~llAHa~A~~~~~~~~~---~~~IGi~~~~~~~~P~~~~~~ 253 (477)
T PRK15014 187 APLFGYCCSGVVYTEHEN-P--------E-ETMYQVLHHQFVASALAVKAARRINP---EMKVGCMLAMVPLYPYSCNPD 253 (477)
T ss_pred cccccccccccccCCCCc-h--------h-HHHHHHHHHHHHHHHHHHHHHHHhCC---CCeEEEEEeCceeccCCCCHH
Confidence 6778874 765 44321 1 0 11348999999999999999999764 47899999999999985 57
Q ss_pred cHHHHHHHhc--c-cC-------Cc--------------cc-----ccc-CCCcceeEeeccCcceeeCCCC--------
Q 006252 385 DVTAVTLANT--L-TT-------FP--------------YV-----DSI-SDRLDFIGINYYGQEVVSGPGL-------- 426 (654)
Q Consensus 385 D~~aa~~~n~--l-~~-------~p--------------~~-----d~I-~~~~DFiGINyYt~~~V~~~~~-------- 426 (654)
|+.|+.+... . +. +| .+ +.+ ++++||||||||++.+|+....
T Consensus 254 D~~Aa~~~~~~~~~f~d~~~~G~YP~~~~~~~~~~~~~~~~~~~d~~~i~~~~~DFlGiNyYt~~~v~~~~~~~~~~~~~ 333 (477)
T PRK15014 254 DVMFAQESMRERYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMTNAVKAEGGTGDAISGF 333 (477)
T ss_pred HHHHHHHHHHhcccccccccCCCCCHHHHHHHHhcCCCCCCCHHHHHHHhcCCCCEEEEcceeCeeeccCCCCCCCcccc
Confidence 8888754321 1 11 11 00 113 5789999999999999874211
Q ss_pred -cccCCC--CcccCCcccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCC---------CCccccHHHHHHHHHHHHHHH
Q 006252 427 -KLVETD--EYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSD---------ETDLIRRPYVIEHLLAVYAAM 494 (654)
Q Consensus 427 -~~~~~~--~~s~~G~~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad---------~~D~~Ri~YL~~hL~~v~kAi 494 (654)
..++++ ..+++||+|+|+||+.+|++++++|+ +||||||||++. .+|..|+.||++||.+|++||
T Consensus 334 ~~~~~~~~~~~~~~gw~i~P~Gl~~~l~~~~~~Y~---~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~Yl~~hl~~l~~Ai 410 (477)
T PRK15014 334 EGSVPNPYVKASDWGWQIDPVGLRYALCELYERYQ---KPLFIVENGFGAYDKVEEDGSINDDYRIDYLRAHIEEMKKAV 410 (477)
T ss_pred ccccCCCCcccCCCCCccCcHHHHHHHHHHHHhcC---CCEEEeCCCCCCCCCcCcCCccCCHHHHHHHHHHHHHHHHHH
Confidence 011222 35779999999999999999999996 689999999984 248899999999999999999
Q ss_pred H-cCCCeeEEEEeecccccCCCCC-CCCccceEEEcCCC----CccccccchHHHHHHHHHcCCC
Q 006252 495 I-TGVPVIGYLFWTISDNWEWADG-YGPKFGLVAVDRAN----NLARIPRPSYHLFTKVVTTGKV 553 (654)
Q Consensus 495 ~-dGV~V~GY~~WSLlDNfEW~~G-Y~~RFGL~~VD~~~----~l~R~PK~Sa~wY~~ii~~~~i 553 (654)
+ +||+|+||++|||||||||.+| |++||||++||+++ +++|+||+|++||+++|++++.
T Consensus 411 ~~dGv~v~GY~~WSl~DnfEw~~G~y~~RfGl~~VD~~~~~~~~~~R~pK~S~~wy~~ii~~ng~ 475 (477)
T PRK15014 411 TYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWYKEVIASNGE 475 (477)
T ss_pred HHcCCCEEEEeeccchhhhcccCCCccCccceEEECCCCCCCcccceecccHHHHHHHHHHhcCC
Confidence 5 9999999999999999999999 99999999999986 4799999999999999998765
No 12
>PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional
Probab=100.00 E-value=2.2e-93 Score=788.38 Aligned_cols=371 Identities=26% Similarity=0.474 Sum_probs=317.0
Q ss_pred CcCCccccccccccccc------------cC--CCCcccccCCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCc
Q 006252 164 EVPTENEEVHHKVTAWH------------NV--PHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLK 229 (654)
Q Consensus 164 ~~~~~~~~~~~~~~~~~------------n~--~~pe~a~~~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~ 229 (654)
..||+||.|+|.++++. ++ ++++.||+|||+|+|||+||++||+++|||||+|+||+|++ ..
T Consensus 28 kg~siwD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~D~Yhry~eDi~l~~~lG~~~yR~si~WsRi~P~g----~~ 103 (474)
T PRK09852 28 KGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEAIDFYHRYKEDIALMAEMGFKVFRTSIAWSRLFPQG----DE 103 (474)
T ss_pred CCCchhhccccCCCcccccccccccccccccCcCCCCccCchhhhhHHHHHHHHHcCCCeEEeeceeeeeeeCC----CC
Confidence 37899999999887652 22 26789999999999999999999999999999999999985 23
Q ss_pred cccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccc-cCCCCChhhHHHHHHHHHHHHHHhCCccceEEEccCcce
Q 006252 230 ETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGE-YGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHV 308 (654)
Q Consensus 230 g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~-~GGW~n~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPnv 308 (654)
+.+|++|++||+++|++|+++||+|||||||||+|+||++ +|||+|++++++|++||++||++|||+|++|+|||||++
T Consensus 104 ~~~n~~~~~~Y~~~i~~l~~~gi~p~VtL~H~~~P~~l~~~~GGW~~~~~~~~F~~ya~~~~~~fgd~Vk~WiTfNEPn~ 183 (474)
T PRK09852 104 LTPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKMVEFFSRYARTCFEAFDGLVKYWLTFNEINI 183 (474)
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEEEeeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhcCcCCeEEeecchhh
Confidence 5689999999999999999999999999999999999986 599999999999999999999999999999999999999
Q ss_pred eeecccc-CCC-CCCCCCChhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeeccccCCCC--cc
Q 006252 309 FCMLTYC-AGT-WPGGNPDMLEVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSSTSTKSKVGVAHHVSFMRPYG--LF 384 (654)
Q Consensus 309 ~~~~GY~-~G~-~pPg~~~~~~~~~~~~~~~~~~~a~hnLLlAHA~Ay~~ir~~~~~~q~g~IGi~~~~~~~~P~~--~~ 384 (654)
++..||. .|. +||+.... ....+++||+++|||+||++||+..+ .++||++++..+++|.+ +.
T Consensus 184 ~~~~gy~~~g~~~~p~~~~~----------~~~~~~~hn~llAHa~A~~~~~~~~~---~~~IGi~~~~~~~~P~~~~~~ 250 (474)
T PRK09852 184 MLHSPFSGAGLVFEEGENQD----------QVKYQAAHHELVASALATKIAHEVNP---QNQVGCMLAGGNFYPYSCKPE 250 (474)
T ss_pred hhccCccccCcccCCCCCch----------HhHHHHHHHHHHHHHHHHHHHHHhCC---CCeEEEEEeCCeeeeCCCCHH
Confidence 9999996 675 47763211 11248999999999999999999764 47899999999999976 56
Q ss_pred cHHHHHHHh---cccC-------Cc--------------c-----ccccCCCcceeEeeccCcceeeCCC------C---
Q 006252 385 DVTAVTLAN---TLTT-------FP--------------Y-----VDSISDRLDFIGINYYGQEVVSGPG------L--- 426 (654)
Q Consensus 385 D~~aa~~~n---~l~~-------~p--------------~-----~d~I~~~~DFiGINyYt~~~V~~~~------~--- 426 (654)
|+.|+...+ .++. +| . .+.|++++||+|||||++.+|+... .
T Consensus 251 d~~AA~~~~~~~~~~~d~~~~G~YP~~~~~~~~~~~~~p~~~~~d~~~i~~~~DFlGiNyYt~~~v~~~~~~~~~~~~~~ 330 (474)
T PRK09852 251 DVWAALEKDRENLFFIDVQARGAYPAYSARVFREKGVTIDKAPGDDEILKNTVDFVSFSYYASRCASAEMNANNSSAANV 330 (474)
T ss_pred HHHHHHHHHHHhhhhcchhhCCCccHHHHHHHHhcCCCCCCCHHHHHHhcCCCCEEEEccccCeecccCCCCCCCCcCCc
Confidence 887775322 1111 11 0 1235789999999999999987421 0
Q ss_pred -cccCCC--CcccCCcccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCC---------CCccccHHHHHHHHHHHHHHH
Q 006252 427 -KLVETD--EYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSD---------ETDLIRRPYVIEHLLAVYAAM 494 (654)
Q Consensus 427 -~~~~~~--~~s~~G~~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad---------~~D~~Ri~YL~~hL~~v~kAi 494 (654)
....++ +.+++||+|+|+||+.+|+++++||+ .||||||||++. .+|..|+.||++||.+|++||
T Consensus 331 ~~~~~~p~~~~~~~gw~i~P~Gl~~~l~~~~~~Y~---~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~Yl~~hl~~~~~Ai 407 (474)
T PRK09852 331 VKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQ---KPLFLVENGLGAKDEIAANGEINDDYRISYLREHIRAMGEAI 407 (474)
T ss_pred eecccCCCcccCCCCCeeChHHHHHHHHHHHHhcC---CCEEEeCCCCCCCCCcCCCCccCCHHHHHHHHHHHHHHHHHH
Confidence 001122 45779999999999999999999996 689999999993 248899999999999999999
Q ss_pred HcCCCeeEEEEeecccccCCCCC-CCCccceEEEcCCC----CccccccchHHHHHHHHHcCCCC
Q 006252 495 ITGVPVIGYLFWTISDNWEWADG-YGPKFGLVAVDRAN----NLARIPRPSYHLFTKVVTTGKVT 554 (654)
Q Consensus 495 ~dGV~V~GY~~WSLlDNfEW~~G-Y~~RFGL~~VD~~~----~l~R~PK~Sa~wY~~ii~~~~i~ 554 (654)
++||||+||++|||||||||..| |++||||++||+++ +++|+||+|++||+++|++++.+
T Consensus 408 ~dGv~V~GY~~WSl~Dn~Ew~~G~y~~RfGLv~VD~~~~~~~t~~R~pK~S~~wy~~ii~~ng~~ 472 (474)
T PRK09852 408 ADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVYVDRDDAGNGTLTRTRKKSFWWYKKVIASNGED 472 (474)
T ss_pred HCCCCEEEEEeecccccccccCCCccceeeeEEECCCCCCCcccceecccHHHHHHHHHHhCCcc
Confidence 99999999999999999999999 99999999999986 58999999999999999988764
No 13
>TIGR03356 BGL beta-galactosidase.
Probab=100.00 E-value=1.1e-90 Score=759.46 Aligned_cols=359 Identities=31% Similarity=0.568 Sum_probs=315.4
Q ss_pred cCCccccccccccccccCCCCcccccCCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHH
Q 006252 165 VPTENEEVHHKVTAWHNVPHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWII 244 (654)
Q Consensus 165 ~~~~~~~~~~~~~~~~n~~~pe~a~~~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lI 244 (654)
.||+||.|+|+++++.++.+++.||+|||+|+|||++||+||+++|||||+|+||+|++ .|.+|+++++||+++|
T Consensus 26 g~s~wd~~~~~~~~~~~~~~~~~a~d~y~~y~eDi~l~~~~G~~~~R~si~Wsri~p~g-----~~~~n~~~~~~y~~~i 100 (427)
T TIGR03356 26 GPSIWDTFSHTPGKVKDGDTGDVACDHYHRYEEDVALMKELGVDAYRFSIAWPRIFPEG-----TGPVNPKGLDFYDRLV 100 (427)
T ss_pred ccchhheeccCCCcccCCCCCCccccHHHhHHHHHHHHHHcCCCeEEcccchhhcccCC-----CCCcCHHHHHHHHHHH
Confidence 78999999999998878778999999999999999999999999999999999999985 3689999999999999
Q ss_pred HHHHHcCCeEEEEeccCCCcccccccCCCCChhhHHHHHHHHHHHHHHhCCccceEEEccCcceeeeccccCCCCCCCCC
Q 006252 245 NRVRSYGMKVMLTLFHHSLPAWAGEYGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCMLTYCAGTWPGGNP 324 (654)
Q Consensus 245 d~L~~~GI~PiVTL~HwDLP~wL~~~GGW~n~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPnv~~~~GY~~G~~pPg~~ 324 (654)
++|+++||+|||||||||+|+||++.|||+|++++++|++||+.||++|||+|++|+|||||++++..||..|.+||+.+
T Consensus 101 ~~l~~~gi~pivtL~Hfd~P~~l~~~gGw~~~~~~~~f~~ya~~~~~~~~d~v~~w~t~NEp~~~~~~~y~~G~~~P~~~ 180 (427)
T TIGR03356 101 DELLEAGIEPFVTLYHWDLPQALEDRGGWLNRDTAEWFAEYAAVVAERLGDRVKHWITLNEPWCSAFLGYGLGVHAPGLR 180 (427)
T ss_pred HHHHHcCCeeEEeeccCCccHHHHhcCCCCChHHHHHHHHHHHHHHHHhCCcCCEEEEecCcceecccchhhccCCCCCc
Confidence 99999999999999999999999988999999999999999999999999999999999999999999999999898854
Q ss_pred ChhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeeccccCCCC--cccHHHHHHHhccc------
Q 006252 325 DMLEVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSSTSTKSKVGVAHHVSFMRPYG--LFDVTAVTLANTLT------ 396 (654)
Q Consensus 325 ~~~~~~~~~~~~~~~~~a~hnLLlAHA~Ay~~ir~~~~~~q~g~IGi~~~~~~~~P~~--~~D~~aa~~~n~l~------ 396 (654)
+. ....+++|||++||++|+++||+..+ .++||++++..+++|.+ +.|+.++.+.+.+.
T Consensus 181 ~~----------~~~~~~~hnll~Aha~A~~~~~~~~~---~~~IGi~~~~~~~~P~~~~~~d~~aa~~~~~~~~~~f~d 247 (427)
T TIGR03356 181 DL----------RAALQAAHHLLLAHGLAVQALRANGP---GAQVGIVLNLTPVYPASDSPEDVAAARRADGLLNRWFLD 247 (427)
T ss_pred cH----------HHHHHHHHHHHHHHHHHHHHHHHhCC---CCeEEEEEeCCeeeeCCCCHHHHHHHHHHHHHHhhhhhH
Confidence 32 11248999999999999999999775 47899999999999975 56777775443211
Q ss_pred -----CCc-----------c-----ccccCCCcceeEeeccCcceeeCCCCc------ccCCCCcccCCcccCcHHHHHH
Q 006252 397 -----TFP-----------Y-----VDSISDRLDFIGINYYGQEVVSGPGLK------LVETDEYSESGRGVYPDGLFRV 449 (654)
Q Consensus 397 -----~~p-----------~-----~d~I~~~~DFiGINyYt~~~V~~~~~~------~~~~~~~s~~G~~i~P~GL~~~ 449 (654)
.+| . .+.+++++||||||||++.+|+..... ..++.+.+.+||+++|+||+.+
T Consensus 248 ~~~~G~yP~~~~~~l~~~p~~~~~d~~~l~~~~DFiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~gw~i~P~Gl~~~ 327 (427)
T TIGR03356 248 PLLKGRYPEDLLEYLGDAPFVQDGDLETIAQPLDFLGINYYTRSVVAADPGTGAGFVEVPEGVPKTAMGWEVYPEGLYDL 327 (427)
T ss_pred HHhCCCCCHHHHHHhccCCCCCHHHHHHhcCCCCEEEEeccccceeccCCCCCCCccccCCCCCcCCCCCeechHHHHHH
Confidence 112 0 123578899999999999988742110 0112234668999999999999
Q ss_pred HHHHHHHhCCCCCCEEEeecCCCC--------CCccccHHHHHHHHHHHHHHHHcCCCeeEEEEeecccccCCCCCCCCc
Q 006252 450 LHQFHERYKHLNLPFIITENGVSD--------ETDLIRRPYVIEHLLAVYAAMITGVPVIGYLFWTISDNWEWADGYGPK 521 (654)
Q Consensus 450 L~~i~~rY~~~~~PI~ITENG~ad--------~~D~~Ri~YL~~hL~~v~kAi~dGV~V~GY~~WSLlDNfEW~~GY~~R 521 (654)
|+++++||+ ++||||||||++. .+|..|+.||++||.+|++||++||||+||++|||+|||||.+||++|
T Consensus 328 L~~~~~rY~--~ppi~ITENG~~~~d~~~~g~~~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~Dn~ew~~gy~~r 405 (427)
T TIGR03356 328 LLRLKEDYP--GPPIYITENGAAFDDEVTDGEVHDPERIAYLRDHLAALARAIEEGVDVRGYFVWSLLDNFEWAEGYSKR 405 (427)
T ss_pred HHHHHHhcC--CCCEEEeCCCCCcCCCCcCCCcCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEecccccccchhcccccc
Confidence 999999997 4689999999984 248899999999999999999999999999999999999999999999
Q ss_pred cceEEEcCCCCccccccchHHHH
Q 006252 522 FGLVAVDRANNLARIPRPSYHLF 544 (654)
Q Consensus 522 FGL~~VD~~~~l~R~PK~Sa~wY 544 (654)
|||++||++ +++|+||+|++||
T Consensus 406 fGl~~VD~~-~~~R~~K~S~~wy 427 (427)
T TIGR03356 406 FGLVHVDYE-TQKRTPKDSAKWY 427 (427)
T ss_pred cceEEECCC-CCcccccceeeeC
Confidence 999999998 4799999999997
No 14
>smart00633 Glyco_10 Glycosyl hydrolase family 10.
Probab=99.64 E-value=1.8e-14 Score=148.14 Aligned_cols=248 Identities=19% Similarity=0.264 Sum_probs=159.3
Q ss_pred ccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCe--EEEEeccCCCcccccccCCCCChhhHHHHHHHHHHHHH
Q 006252 214 IDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMK--VMLTLFHHSLPAWAGEYGGWKLEKTIDYFMDFTRLVVD 291 (654)
Q Consensus 214 IsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~--PiVTL~HwDLP~wL~~~GGW~n~~~vd~Fa~YA~~vfe 291 (654)
+.|++|+|++ |.+|.+.. +.+++.++++||+ ..+.+.|...|.|+...+ .++..+.|.+|.+.+++
T Consensus 1 ~kW~~~ep~~------G~~n~~~~---D~~~~~a~~~gi~v~gH~l~W~~~~P~W~~~~~---~~~~~~~~~~~i~~v~~ 68 (254)
T smart00633 1 MKWDSTEPSR------GQFNFSGA---DAIVNFAKENGIKVRGHTLVWHSQTPDWVFNLS---KETLLARLENHIKTVVG 68 (254)
T ss_pred CCcccccCCC------CccChHHH---HHHHHHHHHCCCEEEEEEEeecccCCHhhhcCC---HHHHHHHHHHHHHHHHH
Confidence 3699999975 78997664 5799999999999 455677889999987533 57788999999999999
Q ss_pred HhCCccceEEEccCcceeeeccccCCCCCCCCCChhhhhhcCCCchhHHHHH-HHHHHHHHHHHHHHHhhCCCCCCCeEE
Q 006252 292 SVSDIVDYWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATSALPTGVFNQAM-HWMAIAHSKAYDYIHAKSSTSTKSKVG 370 (654)
Q Consensus 292 rfGDrVk~WiT~NEPnv~~~~GY~~G~~pPg~~~~~~~~~~~~~~~~~~~a~-hnLLlAHA~Ay~~ir~~~~~~q~g~IG 370 (654)
||+++|..|-++|||......|+... .+..++ ..++ ..|+++.|+..|+. +
T Consensus 69 ry~g~i~~wdV~NE~~~~~~~~~~~~--------------------~w~~~~G~~~i---~~af~~ar~~~P~a---~-- 120 (254)
T smart00633 69 RYKGKIYAWDVVNEALHDNGSGLRRS--------------------VWYQILGEDYI---EKAFRYAREADPDA---K-- 120 (254)
T ss_pred HhCCcceEEEEeeecccCCCcccccc--------------------hHHHhcChHHH---HHHHHHHHHhCCCC---E--
Confidence 99999999999999985211001000 111111 1122 34777788888753 2
Q ss_pred EEeec-cccCCCCcccHHHHHHHhcccCCccccccCCCcceeEeeccCcceeeCCCCcccCCCCcccCCcccCcHHHHHH
Q 006252 371 VAHHV-SFMRPYGLFDVTAVTLANTLTTFPYVDSISDRLDFIGINYYGQEVVSGPGLKLVETDEYSESGRGVYPDGLFRV 449 (654)
Q Consensus 371 i~~~~-~~~~P~~~~D~~aa~~~n~l~~~p~~d~I~~~~DFiGINyYt~~~V~~~~~~~~~~~~~s~~G~~i~P~GL~~~ 449 (654)
+.+|- ....+ ..... ...+.+ ..+..-...+|-||++..... . ...|..|...
T Consensus 121 l~~Ndy~~~~~---~~k~~-~~~~~v---~~l~~~g~~iDgiGlQ~H~~~--~-----------------~~~~~~~~~~ 174 (254)
T smart00633 121 LFYNDYNTEEP---NAKRQ-AIYELV---KKLKAKGVPIDGIGLQSHLSL--G-----------------SPNIAEIRAA 174 (254)
T ss_pred EEEeccCCcCc---cHHHH-HHHHHH---HHHHHCCCccceeeeeeeecC--C-----------------CCCHHHHHHH
Confidence 33331 11111 00100 000000 001111335899999742110 0 0124568888
Q ss_pred HHHHHHHhCCCCCCEEEeecCCCCCCc-cccHHHHHHHHHHHHHHHHcCCCeeEEEEeecccccCCCCCCCCccceEEEc
Q 006252 450 LHQFHERYKHLNLPFIITENGVSDETD-LIRRPYVIEHLLAVYAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVD 528 (654)
Q Consensus 450 L~~i~~rY~~~~~PI~ITENG~ad~~D-~~Ri~YL~~hL~~v~kAi~dGV~V~GY~~WSLlDNfEW~~GY~~RFGL~~VD 528 (654)
|..+.+. ++||+|||.+++...+ ..+.+++++++..+.. . -.|.|.++|.+.|...|..+ .+.||+.-|
T Consensus 175 l~~~~~~----g~pi~iTE~dv~~~~~~~~qA~~~~~~l~~~~~---~-p~v~gi~~Wg~~d~~~W~~~--~~~~L~d~~ 244 (254)
T smart00633 175 LDRFASL----GLEIQITELDISGYPNPQAQAADYEEVFKACLA---H-PAVTGVTVWGVTDKYSWLDG--GAPLLFDAN 244 (254)
T ss_pred HHHHHHc----CCceEEEEeecCCCCcHHHHHHHHHHHHHHHHc---C-CCeeEEEEeCCccCCcccCC--CCceeECCC
Confidence 8877543 5899999999987543 3455667666655433 2 27899999999999999865 567898433
Q ss_pred CCCCccccccchHHH
Q 006252 529 RANNLARIPRPSYHL 543 (654)
Q Consensus 529 ~~~~l~R~PK~Sa~w 543 (654)
-+|||++++
T Consensus 245 ------~~~kpa~~~ 253 (254)
T smart00633 245 ------YQPKPAYWA 253 (254)
T ss_pred ------CCCChhhhc
Confidence 378998864
No 15
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A ....
Probab=99.55 E-value=7.3e-13 Score=134.78 Aligned_cols=254 Identities=20% Similarity=0.273 Sum_probs=156.6
Q ss_pred CcHHHHHHHHhcCCCeEEecccccccC-CCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccccCC
Q 006252 194 DPDIELKLAKDTGVSVFRLGIDWSRIM-PAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGG 272 (654)
Q Consensus 194 ~y~eDi~Lmk~lGv~~yRfSIsWsRI~-P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~~GG 272 (654)
..++|++.|+++|++++|+.|.|..++ |.+ .+.++...+++++++|+.+.++||.+||+||+. |.|....++
T Consensus 22 ~~~~~~~~~~~~G~n~VRi~v~~~~~~~~~~-----~~~~~~~~~~~ld~~v~~a~~~gi~vild~h~~--~~w~~~~~~ 94 (281)
T PF00150_consen 22 ITEADFDQLKALGFNTVRIPVGWEAYQEPNP-----GYNYDETYLARLDRIVDAAQAYGIYVILDLHNA--PGWANGGDG 94 (281)
T ss_dssp SHHHHHHHHHHTTESEEEEEEESTSTSTTST-----TTSBTHHHHHHHHHHHHHHHHTT-EEEEEEEES--TTCSSSTST
T ss_pred CHHHHHHHHHHCCCCEEEeCCCHHHhcCCCC-----CccccHHHHHHHHHHHHHHHhCCCeEEEEeccC--ccccccccc
Confidence 668999999999999999999998888 443 246899999999999999999999999999985 777554444
Q ss_pred CC-ChhhHHHHHHHHHHHHHHhCC--ccceEEEccCcceeeeccccCCCCCCCCCChhhhhhcCCCchhHHHHHHHHHHH
Q 006252 273 WK-LEKTIDYFMDFTRLVVDSVSD--IVDYWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATSALPTGVFNQAMHWMAIA 349 (654)
Q Consensus 273 W~-n~~~vd~Fa~YA~~vferfGD--rVk~WiT~NEPnv~~~~GY~~G~~pPg~~~~~~~~~~~~~~~~~~~a~hnLLlA 349 (654)
+. .....++|.+|.+.++++|++ .|-.|-.+|||...... -.|+.. ....+...
T Consensus 95 ~~~~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~----~~w~~~-------------------~~~~~~~~ 151 (281)
T PF00150_consen 95 YGNNDTAQAWFKSFWRALAKRYKDNPPVVGWELWNEPNGGNDD----ANWNAQ-------------------NPADWQDW 151 (281)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHTTTTTTEEEESSSSGCSTTST----TTTSHH-------------------HTHHHHHH
T ss_pred cccchhhHHHHHhhhhhhccccCCCCcEEEEEecCCccccCCc----cccccc-------------------cchhhhhH
Confidence 43 456788999999999999944 58899999999853221 001000 00112334
Q ss_pred HHHHHHHHHhhCCCCCCCeEEEEeeccccCCCCcccHHHHHHHhcccCCccccccCCCcceeEeeccCcceeeCCCCccc
Q 006252 350 HSKAYDYIHAKSSTSTKSKVGVAHHVSFMRPYGLFDVTAVTLANTLTTFPYVDSISDRLDFIGINYYGQEVVSGPGLKLV 429 (654)
Q Consensus 350 HA~Ay~~ir~~~~~~q~g~IGi~~~~~~~~P~~~~D~~aa~~~n~l~~~p~~d~I~~~~DFiGINyYt~~~V~~~~~~~~ 429 (654)
..++++.||+..++. .|-+- ...+. .+....... .| ......|++.+|+|.........
T Consensus 152 ~~~~~~~Ir~~~~~~---~i~~~-~~~~~-----~~~~~~~~~-----~P---~~~~~~~~~~~H~Y~~~~~~~~~---- 210 (281)
T PF00150_consen 152 YQRAIDAIRAADPNH---LIIVG-GGGWG-----ADPDGAAAD-----NP---NDADNNDVYSFHFYDPYDFSDQW---- 210 (281)
T ss_dssp HHHHHHHHHHTTSSS---EEEEE-EHHHH-----TBHHHHHHH-----ST---TTTTTSEEEEEEEETTTCHHTTT----
T ss_pred HHHHHHHHHhcCCcc---eeecC-CCccc-----cccchhhhc-----Cc---ccccCceeEEeeEeCCCCcCCcc----
Confidence 466888899988762 22221 11111 011111111 22 12456799999999853211100
Q ss_pred CCCCcccCCcccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCCCCccccHHHHHHHHHHHHHHHHcCCCeeEEEEeecc
Q 006252 430 ETDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDETDLIRRPYVIEHLLAVYAAMITGVPVIGYLFWTIS 509 (654)
Q Consensus 430 ~~~~~s~~G~~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad~~D~~Ri~YL~~hL~~v~kAi~dGV~V~GY~~WSLl 509 (654)
.. +.......+...+..........++||+|+|.|++..+......+....+..+. +.| .|.++|++-
T Consensus 211 -----~~-~~~~~~~~~~~~~~~~~~~~~~~g~pv~~gE~G~~~~~~~~~~~~~~~~~~~~~---~~~---~g~~~W~~~ 278 (281)
T PF00150_consen 211 -----NP-GNWGDASALESSFRAALNWAKKNGKPVVVGEFGWSNNDGNGSTDYADAWLDYLE---QNG---IGWIYWSWK 278 (281)
T ss_dssp -----ST-CSHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSTTTSCHHHHHHHHHHHHHH---HTT---CEEEECEES
T ss_pred -----cc-ccchhhhHHHHHHHHHHHHHHHcCCeEEEeCcCCcCCCCCcCHHHHHHHHHHHH---HCC---CeEEEEecC
Confidence 00 000111122333333332222236899999999986444334445554433332 234 599999874
Q ss_pred c
Q 006252 510 D 510 (654)
Q Consensus 510 D 510 (654)
.
T Consensus 279 ~ 279 (281)
T PF00150_consen 279 P 279 (281)
T ss_dssp S
T ss_pred C
Confidence 4
No 16
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A.
Probab=99.25 E-value=5.2e-10 Score=121.19 Aligned_cols=114 Identities=25% Similarity=0.444 Sum_probs=86.7
Q ss_pred CCcccccCCCCcHHHHHHHHhcCCCeEEe-cccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCC
Q 006252 184 HPEERLRFWSDPDIELKLAKDTGVSVFRL-GIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHS 262 (654)
Q Consensus 184 ~pe~a~~~y~~y~eDi~Lmk~lGv~~yRf-SIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwD 262 (654)
.||.-.. +.+++|+++||++|+|.+|+ .++|++|+|++ |.+|... +|++|+.+.++||++++.+....
T Consensus 3 ~pe~~~~--e~~~~d~~~m~~~G~n~vri~~~~W~~lEP~e------G~ydF~~---lD~~l~~a~~~Gi~viL~~~~~~ 71 (374)
T PF02449_consen 3 YPEQWPE--EEWEEDLRLMKEAGFNTVRIGEFSWSWLEPEE------GQYDFSW---LDRVLDLAAKHGIKVILGTPTAA 71 (374)
T ss_dssp -GGGS-C--CHHHHHHHHHHHHT-SEEEE-CCEHHHH-SBT------TB---HH---HHHHHHHHHCTT-EEEEEECTTT
T ss_pred CcccCCH--HHHHHHHHHHHHcCCCEEEEEEechhhccCCC------CeeecHH---HHHHHHHHHhccCeEEEEecccc
Confidence 4444433 67899999999999999996 67999999985 8899755 67899999999999999999999
Q ss_pred Ccccccc----------------cCCC-----CChhhHHHHHHHHHHHHHHhCCc--cceEEEccCcce
Q 006252 263 LPAWAGE----------------YGGW-----KLEKTIDYFMDFTRLVVDSVSDI--VDYWVTFNEPHV 308 (654)
Q Consensus 263 LP~wL~~----------------~GGW-----~n~~~vd~Fa~YA~~vferfGDr--Vk~WiT~NEPnv 308 (654)
.|.||.+ .|+. .++...+.+.++++.++++|++. |-.|.+-|||..
T Consensus 72 ~P~Wl~~~~Pe~~~~~~~g~~~~~g~~~~~~~~~p~yr~~~~~~~~~l~~~y~~~p~vi~~~i~NE~~~ 140 (374)
T PF02449_consen 72 PPAWLYDKYPEILPVDADGRRRGFGSRQHYCPNSPAYREYARRFIRALAERYGDHPAVIGWQIDNEPGY 140 (374)
T ss_dssp S-HHHHCCSGCCC-B-TTTSBEECCCSTT-HCCHHHHHHHHHHHHHHHHHHHTTTTTEEEEEECCSTTC
T ss_pred cccchhhhcccccccCCCCCcCccCCccccchhHHHHHHHHHHHHHHHHhhccccceEEEEEeccccCc
Confidence 9999842 1222 24667788888888999999987 889999999976
No 17
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A ....
Probab=99.12 E-value=9.1e-09 Score=110.46 Aligned_cols=238 Identities=21% Similarity=0.321 Sum_probs=139.2
Q ss_pred HHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCC---CcccccccCCC
Q 006252 197 IELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHS---LPAWAGEYGGW 273 (654)
Q Consensus 197 eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwD---LP~wL~~~GGW 273 (654)
+=+++||+.|+|++|+-+ | +-|.. .|.-| +++--.+..+.+++||+.+|++|-=| =|---.....|
T Consensus 28 d~~~ilk~~G~N~vRlRv-w--v~P~~-----~g~~~---~~~~~~~akrak~~Gm~vlldfHYSD~WaDPg~Q~~P~aW 96 (332)
T PF07745_consen 28 DLFQILKDHGVNAVRLRV-W--VNPYD-----GGYND---LEDVIALAKRAKAAGMKVLLDFHYSDFWADPGKQNKPAAW 96 (332)
T ss_dssp -HHHHHHHTT--EEEEEE----SS-TT-----TTTTS---HHHHHHHHHHHHHTT-EEEEEE-SSSS--BTTB-B--TTC
T ss_pred CHHHHHHhcCCCeEEEEe-c--cCCcc-----cccCC---HHHHHHHHHHHHHCCCeEEEeecccCCCCCCCCCCCCccC
Confidence 358999999999999977 5 33431 13344 67778899999999999999998533 22222223689
Q ss_pred CC---hhhHHHHHHHHHHHHHHh---CCccceEEEccCcceeeeccccCCCCCCCCCChhhhhhcCCCchhHHHHHHHHH
Q 006252 274 KL---EKTIDYFMDFTRLVVDSV---SDIVDYWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATSALPTGVFNQAMHWMA 347 (654)
Q Consensus 274 ~n---~~~vd~Fa~YA~~vferf---GDrVk~WiT~NEPnv~~~~GY~~G~~pPg~~~~~~~~~~~~~~~~~~~a~hnLL 347 (654)
.+ .+..+...+|..-+.+.+ |=.++++.+=||.+.-.+ ||-+... .+ .-+-.||
T Consensus 97 ~~~~~~~l~~~v~~yT~~vl~~l~~~G~~pd~VQVGNEin~Gml-------wp~g~~~------------~~-~~~a~ll 156 (332)
T PF07745_consen 97 ANLSFDQLAKAVYDYTKDVLQALKAAGVTPDMVQVGNEINNGML-------WPDGKPS------------NW-DNLAKLL 156 (332)
T ss_dssp TSSSHHHHHHHHHHHHHHHHHHHHHTT--ESEEEESSSGGGEST-------BTTTCTT-------------H-HHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCCccEEEeCcccccccc-------CcCCCcc------------CH-HHHHHHH
Confidence 87 778888999999888776 445888999999884332 4444321 11 2223466
Q ss_pred HHHHHHHHHHHhhCCCCCCCeEEEEeeccccCCCCcccHHHHHHHhcccCCccccc---cCCCcceeEeeccCcceeeCC
Q 006252 348 IAHSKAYDYIHAKSSTSTKSKVGVAHHVSFMRPYGLFDVTAVTLANTLTTFPYVDS---ISDRLDFIGINYYGQEVVSGP 424 (654)
Q Consensus 348 lAHA~Ay~~ir~~~~~~q~g~IGi~~~~~~~~P~~~~D~~aa~~~n~l~~~p~~d~---I~~~~DFiGINyYt~~~V~~~ 424 (654)
.| +++++|+..|.. +| ++|.. .| .|...... +++. ....+|+||++||..
T Consensus 157 ~a---g~~AVr~~~p~~---kV--~lH~~--~~---~~~~~~~~--------~f~~l~~~g~d~DviGlSyYP~------ 209 (332)
T PF07745_consen 157 NA---GIKAVREVDPNI---KV--MLHLA--NG---GDNDLYRW--------FFDNLKAAGVDFDVIGLSYYPF------ 209 (332)
T ss_dssp HH---HHHHHHTHSSTS---EE--EEEES---T---TSHHHHHH--------HHHHHHHTTGG-SEEEEEE-ST------
T ss_pred HH---HHHHHHhcCCCC---cE--EEEEC--CC---CchHHHHH--------HHHHHHhcCCCcceEEEecCCC------
Confidence 55 666677777653 44 34432 12 22211110 1221 235689999999963
Q ss_pred CCcccCCCCcccCCcccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCCC---Ccc-c--------------cHHHHHHH
Q 006252 425 GLKLVETDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDE---TDL-I--------------RRPYVIEH 486 (654)
Q Consensus 425 ~~~~~~~~~~s~~G~~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad~---~D~-~--------------Ri~YL~~h 486 (654)
|.-....|...|+.+.+||+ +||+|+|.|++.. .|. . -.+=-...
T Consensus 210 --------------w~~~l~~l~~~l~~l~~ry~---K~V~V~Et~yp~t~~d~D~~~n~~~~~~~~~~yp~t~~GQ~~~ 272 (332)
T PF07745_consen 210 --------------WHGTLEDLKNNLNDLASRYG---KPVMVVETGYPWTLDDGDGTGNIIGATSLISGYPATPQGQADF 272 (332)
T ss_dssp --------------TST-HHHHHHHHHHHHHHHT----EEEEEEE---SBS--SSSS--SSSSSTGGTTS-SSHHHHHHH
T ss_pred --------------CcchHHHHHHHHHHHHHHhC---CeeEEEeccccccccccccccccCccccccCCCCCCHHHHHHH
Confidence 22245678999999999995 8999999998842 010 0 01112445
Q ss_pred HHHHHHHHHc--CCCeeEEEEeecc
Q 006252 487 LLAVYAAMIT--GVPVIGYLFWTIS 509 (654)
Q Consensus 487 L~~v~kAi~d--GV~V~GY~~WSLl 509 (654)
|..+.+++.+ +-...|.|+|---
T Consensus 273 l~~l~~~v~~~p~~~g~GvfYWeP~ 297 (332)
T PF07745_consen 273 LRDLINAVKNVPNGGGLGVFYWEPA 297 (332)
T ss_dssp HHHHHHHHHTS--TTEEEEEEE-TT
T ss_pred HHHHHHHHHHhccCCeEEEEeeccc
Confidence 5566666654 5789999999543
No 18
>PRK10150 beta-D-glucuronidase; Provisional
Probab=99.12 E-value=1.7e-08 Score=116.13 Aligned_cols=251 Identities=20% Similarity=0.203 Sum_probs=148.5
Q ss_pred CcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCccccc-----
Q 006252 194 DPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAG----- 268 (654)
Q Consensus 194 ~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~----- 268 (654)
.+..|+++||++|+|++|+| ..|.. ..+++.|=+.||-.|.-+--|....|+.
T Consensus 314 ~~~~d~~l~K~~G~N~vR~s-----h~p~~-----------------~~~~~~cD~~GllV~~E~p~~~~~~~~~~~~~~ 371 (604)
T PRK10150 314 LNVHDHNLMKWIGANSFRTS-----HYPYS-----------------EEMLDLADRHGIVVIDETPAVGLNLSFGAGLEA 371 (604)
T ss_pred HHHHHHHHHHHCCCCEEEec-----cCCCC-----------------HHHHHHHHhcCcEEEEecccccccccccccccc
Confidence 46789999999999999995 23421 1467788889998886553222222221
Q ss_pred ---ccCCCC----ChhhHHHHHHHHHHHHHHhCCc--cceEEEccCcceeeeccccCCCCCCCCCChhhhhhcCCCchhH
Q 006252 269 ---EYGGWK----LEKTIDYFMDFTRLVVDSVSDI--VDYWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATSALPTGVF 339 (654)
Q Consensus 269 ---~~GGW~----n~~~vd~Fa~YA~~vferfGDr--Vk~WiT~NEPnv~~~~GY~~G~~pPg~~~~~~~~~~~~~~~~~ 339 (654)
....|. +++..+.+.+-++.+++++... |-.|...||+... . ++
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~mv~r~~NHPSIi~Ws~gNE~~~~---------~-~~----------------- 424 (604)
T PRK10150 372 GNKPKETYSEEAVNGETQQAHLQAIRELIARDKNHPSVVMWSIANEPASR---------E-QG----------------- 424 (604)
T ss_pred cccccccccccccchhHHHHHHHHHHHHHHhccCCceEEEEeeccCCCcc---------c-hh-----------------
Confidence 112232 3567788889899999998877 7789999997310 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeeccccCCCCcccHHHHHHHhcccCCccccccCCCcceeEeeccCcc
Q 006252 340 NQAMHWMAIAHSKAYDYIHAKSSTSTKSKVGVAHHVSFMRPYGLFDVTAVTLANTLTTFPYVDSISDRLDFIGINYYGQE 419 (654)
Q Consensus 340 ~~a~hnLLlAHA~Ay~~ir~~~~~~q~g~IGi~~~~~~~~P~~~~D~~aa~~~n~l~~~p~~d~I~~~~DFiGINyYt~~ 419 (654)
.... +.+.++++|+.++.. .|..+.+... .+ ..+.....+|++|+|.|..-
T Consensus 425 ---~~~~---~~~l~~~~k~~DptR---~vt~~~~~~~-~~-------------------~~~~~~~~~Dv~~~N~Y~~w 475 (604)
T PRK10150 425 ---AREY---FAPLAELTRKLDPTR---PVTCVNVMFA-TP-------------------DTDTVSDLVDVLCLNRYYGW 475 (604)
T ss_pred ---HHHH---HHHHHHHHHhhCCCC---ceEEEecccC-Cc-------------------ccccccCcccEEEEccccee
Confidence 0011 234566678887653 2333321100 00 01122445899999988542
Q ss_pred eeeCCCCcccCCCCcccCCcccCc-HHHHHHHHHHHHHhCCCCCCEEEeecCCCCC-----------CccccHHHHHHHH
Q 006252 420 VVSGPGLKLVETDEYSESGRGVYP-DGLFRVLHQFHERYKHLNLPFIITENGVSDE-----------TDLIRRPYVIEHL 487 (654)
Q Consensus 420 ~V~~~~~~~~~~~~~s~~G~~i~P-~GL~~~L~~i~~rY~~~~~PI~ITENG~ad~-----------~D~~Ri~YL~~hL 487 (654)
+... |....+ ..+...+..+++.| ++||+|||.|.... +++....|+.+|+
T Consensus 476 y~~~--------------~~~~~~~~~~~~~~~~~~~~~---~kP~~isEyg~~~~~~~h~~~~~~~~ee~q~~~~~~~~ 538 (604)
T PRK10150 476 YVDS--------------GDLETAEKVLEKELLAWQEKL---HKPIIITEYGADTLAGLHSMYDDMWSEEYQCAFLDMYH 538 (604)
T ss_pred cCCC--------------CCHHHHHHHHHHHHHHHHHhc---CCCEEEEccCCccccccccCCCCCCCHHHHHHHHHHHH
Confidence 2110 000000 11334445555555 48999999996431 1233444455554
Q ss_pred HHHHHHHHcCCCeeEEEEeecccccCCCCCC----CCccceEEEcCCCCccccccchHHHHHHHHHc
Q 006252 488 LAVYAAMITGVPVIGYLFWTISDNWEWADGY----GPKFGLVAVDRANNLARIPRPSYHLFTKVVTT 550 (654)
Q Consensus 488 ~~v~kAi~dGV~V~GY~~WSLlDNfEW~~GY----~~RFGL~~VD~~~~l~R~PK~Sa~wY~~ii~~ 550 (654)
. ++++-=.+.|-|+|.+.|- .+..|. ....||+.- .|+|||+++.|+.+-+.
T Consensus 539 ~----~~~~~p~~~G~~iW~~~D~-~~~~g~~~~~g~~~Gl~~~------dr~~k~~~~~~k~~~~~ 594 (604)
T PRK10150 539 R----VFDRVPAVVGEQVWNFADF-ATSQGILRVGGNKKGIFTR------DRQPKSAAFLLKKRWTG 594 (604)
T ss_pred H----HHhcCCceEEEEEEeeecc-CCCCCCcccCCCcceeEcC------CCCChHHHHHHHHHhhc
Confidence 4 4554567999999999992 121121 246799733 38999999999998753
No 19
>PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B ....
Probab=98.98 E-value=1.3e-08 Score=108.78 Aligned_cols=264 Identities=22% Similarity=0.344 Sum_probs=156.5
Q ss_pred CCCeEEe--cccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEE--EEeccCCCcccccccCCCCChh---h
Q 006252 206 GVSVFRL--GIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVM--LTLFHHSLPAWAGEYGGWKLEK---T 278 (654)
Q Consensus 206 Gv~~yRf--SIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~Pi--VTL~HwDLP~wL~~~GGW~n~~---~ 278 (654)
-++..=. .+-|..++|.+ |.+|.+. .+.+++-+.++||++- .-+.|--+|.|+....-+...+ .
T Consensus 34 ~Fn~~t~eN~~Kw~~~e~~~------g~~~~~~---~D~~~~~a~~~g~~vrGH~LvW~~~~P~w~~~~~~~~~~~~~~~ 104 (320)
T PF00331_consen 34 HFNSVTPENEMKWGSIEPEP------GRFNFES---ADAILDWARENGIKVRGHTLVWHSQTPDWVFNLANGSPDEKEEL 104 (320)
T ss_dssp H-SEEEESSTTSHHHHESBT------TBEE-HH---HHHHHHHHHHTT-EEEEEEEEESSSS-HHHHTSTTSSBHHHHHH
T ss_pred hCCeeeeccccchhhhcCCC------CccCccc---hhHHHHHHHhcCcceeeeeEEEcccccceeeeccCCCcccHHHH
Confidence 4444444 58999999974 7899755 5689999999999987 3455778999998542233333 7
Q ss_pred HHHHHHHHHHHHHHhCC--ccceEEEccCcceeeeccccCCCCCCCCCChhhhhhcCCCchhHHHHHH-HHHHHHHHHHH
Q 006252 279 IDYFMDFTRLVVDSVSD--IVDYWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATSALPTGVFNQAMH-WMAIAHSKAYD 355 (654)
Q Consensus 279 vd~Fa~YA~~vferfGD--rVk~WiT~NEPnv~~~~GY~~G~~pPg~~~~~~~~~~~~~~~~~~~a~h-nLLlAHA~Ay~ 355 (654)
.....+|.+.++++|++ +|..|=.+|||.-... .+.+.++ ..+.+++- ..+ ..|++
T Consensus 105 ~~~l~~~I~~v~~~y~~~g~i~~WDVvNE~i~~~~-------~~~~~r~-----------~~~~~~lG~~yi---~~aF~ 163 (320)
T PF00331_consen 105 RARLENHIKTVVTRYKDKGRIYAWDVVNEAIDDDG-------NPGGLRD-----------SPWYDALGPDYI---ADAFR 163 (320)
T ss_dssp HHHHHHHHHHHHHHTTTTTTESEEEEEES-B-TTS-------SSSSBCT-----------SHHHHHHTTCHH---HHHHH
T ss_pred HHHHHHHHHHHHhHhccccceEEEEEeeecccCCC-------ccccccC-----------ChhhhcccHhHH---HHHHH
Confidence 88899999999999995 8999999999973221 0111111 01111110 111 34566
Q ss_pred HHHhhCCCCCCCeEEEEee-ccccCCCCcccHHHHHHHhcccCCccccccCCCcceeEeeccCcceeeCCCCcccCCCCc
Q 006252 356 YIHAKSSTSTKSKVGVAHH-VSFMRPYGLFDVTAVTLANTLTTFPYVDSISDRLDFIGINYYGQEVVSGPGLKLVETDEY 434 (654)
Q Consensus 356 ~ir~~~~~~q~g~IGi~~~-~~~~~P~~~~D~~aa~~~n~l~~~p~~d~I~~~~DFiGINyYt~~~V~~~~~~~~~~~~~ 434 (654)
.-|+..|+. -+.+| .....+ +...+.. +.+. .+..-.-++|-||++-.-..
T Consensus 164 ~A~~~~P~a-----~L~~NDy~~~~~----~k~~~~~-~lv~---~l~~~gvpIdgIG~Q~H~~~--------------- 215 (320)
T PF00331_consen 164 AAREADPNA-----KLFYNDYNIESP----AKRDAYL-NLVK---DLKARGVPIDGIGLQSHFDA--------------- 215 (320)
T ss_dssp HHHHHHTTS-----EEEEEESSTTST----HHHHHHH-HHHH---HHHHTTHCS-EEEEEEEEET---------------
T ss_pred HHHHhCCCc-----EEEeccccccch----HHHHHHH-HHHH---HHHhCCCccceechhhccCC---------------
Confidence 667777743 23333 222222 1111110 0000 01111234899999864210
Q ss_pred ccCCcccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCCCC-------ccccHHHHHHHHHHHHHHHHcCC--CeeEEEE
Q 006252 435 SESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDET-------DLIRRPYVIEHLLAVYAAMITGV--PVIGYLF 505 (654)
Q Consensus 435 s~~G~~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad~~-------D~~Ri~YL~~hL~~v~kAi~dGV--~V~GY~~ 505 (654)
+.. |..+...|+++.+ .++||.|||.-+.+.+ +..+..++++.+..+.. -- .|.|.++
T Consensus 216 ---~~~--~~~i~~~l~~~~~----~Gl~i~ITElDv~~~~~~~~~~~~~~qA~~~~~~~~~~~~----~~~~~v~git~ 282 (320)
T PF00331_consen 216 ---GYP--PEQIWNALDRFAS----LGLPIHITELDVRDDDNPPDAEEEEAQAEYYRDFLTACFS----HPPAAVEGITW 282 (320)
T ss_dssp ---TSS--HHHHHHHHHHHHT----TTSEEEEEEEEEESSSTTSCHHHHHHHHHHHHHHHHHHHH----TTHCTEEEEEE
T ss_pred ---CCC--HHHHHHHHHHHHH----cCCceEEEeeeecCCCCCcchHHHHHHHHHHHHHHHHHHh----CCccCCCEEEE
Confidence 011 6778888877643 3699999999988644 33466666666655443 33 7999999
Q ss_pred eecccccCCCCCCCCcc-ceEEEcCCCCccccccchHHHHHH
Q 006252 506 WTISDNWEWADGYGPKF-GLVAVDRANNLARIPRPSYHLFTK 546 (654)
Q Consensus 506 WSLlDNfEW~~GY~~RF-GL~~VD~~~~l~R~PK~Sa~wY~~ 546 (654)
|.+.|+..|-.+..... +|+.-| -.|||+++.+.+
T Consensus 283 Wg~~D~~sW~~~~~~~~~~lfd~~------~~~Kpa~~~~~~ 318 (320)
T PF00331_consen 283 WGFTDGYSWRPDTPPDRPLLFDED------YQPKPAYDAIVD 318 (320)
T ss_dssp SSSBTTGSTTGGHSEG--SSB-TT------SBB-HHHHHHHH
T ss_pred ECCCCCCcccCCCCCCCCeeECCC------cCCCHHHHHHHh
Confidence 99999999986532333 565333 389999887765
No 20
>PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 39 GH39 from CAZY comprises enzymes with several known activities; alpha-L-iduronidase (3.2.1.76 from EC); beta-xylosidase (3.2.1.37 from EC). The most highly conserved regions in these enzymes are located in their N-terminal sections. These contain a glutamic acid residue which, on the basis of similarities with other families of glycosyl hydrolases [], probably acts as the proton donor in their catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BS9_D 2BFG_E 1W91_B 1UHV_D 1PX8_A.
Probab=98.90 E-value=6.7e-08 Score=108.68 Aligned_cols=288 Identities=22% Similarity=0.337 Sum_probs=133.8
Q ss_pred CcHHHHHHHH-hcCCCeEEec--c--cccccCC-CCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccc
Q 006252 194 DPDIELKLAK-DTGVSVFRLG--I--DWSRIMP-AEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWA 267 (654)
Q Consensus 194 ~y~eDi~Lmk-~lGv~~yRfS--I--sWsRI~P-~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL 267 (654)
++.+.+..++ ++|++.+||- + +..-... .+ +| ...+|. ...|.++|.|+++||+|+|.|-. +|.++
T Consensus 40 ~~q~~l~~~~~~~gf~yvR~h~l~~ddm~~~~~~~~--~~-~~~Ynf---~~lD~i~D~l~~~g~~P~vel~f--~p~~~ 111 (486)
T PF01229_consen 40 DWQEQLRELQEELGFRYVRFHGLFSDDMMVYSESDE--DG-IPPYNF---TYLDQILDFLLENGLKPFVELGF--MPMAL 111 (486)
T ss_dssp HHHHHHHHHHCCS--SEEEES-TTSTTTT-EEEEET--TE-EEEE-----HHHHHHHHHHHHCT-EEEEEE-S--B-GGG
T ss_pred HHHHHHHHHHhccCceEEEEEeeccCchhhcccccc--CC-CCcCCh---HHHHHHHHHHHHcCCEEEEEEEe--chhhh
Confidence 4556666665 9999999985 3 2221211 11 01 012676 45568999999999999999976 77776
Q ss_pred cc-------cCCCC-ChhhHHHHHHHHHHHH----HHhC-Cccc--eEEEccCcceeeeccccCCCCCCCCCChhhhhhc
Q 006252 268 GE-------YGGWK-LEKTIDYFMDFTRLVV----DSVS-DIVD--YWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATS 332 (654)
Q Consensus 268 ~~-------~GGW~-n~~~vd~Fa~YA~~vf----erfG-DrVk--~WiT~NEPnv~~~~GY~~G~~pPg~~~~~~~~~~ 332 (654)
.. +.||. .++..+.+.++++.++ +||| +.|. +|.++|||++..++ ..+.
T Consensus 112 ~~~~~~~~~~~~~~~pp~~~~~W~~lv~~~~~h~~~RYG~~ev~~W~fEiWNEPd~~~f~-------~~~~--------- 175 (486)
T PF01229_consen 112 ASGYQTVFWYKGNISPPKDYEKWRDLVRAFARHYIDRYGIEEVSTWYFEIWNEPDLKDFW-------WDGT--------- 175 (486)
T ss_dssp BSS--EETTTTEE-S-BS-HHHHHHHHHHHHHHHHHHHHHHHHTTSEEEESS-TTSTTTS-------GGG----------
T ss_pred cCCCCccccccCCcCCcccHHHHHHHHHHHHHHHHhhcCCccccceeEEeCcCCCccccc-------CCCC---------
Confidence 32 22332 2555666666665554 5555 2466 56899999963321 1110
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCeEEEE-eeccccCCCCcccHHHHHHHhcccCCccccccCCCccee
Q 006252 333 ALPTGVFNQAMHWMAIAHSKAYDYIHAKSSTSTKSKVGVA-HHVSFMRPYGLFDVTAVTLANTLTTFPYVDSISDRLDFI 411 (654)
Q Consensus 333 ~~~~~~~~~a~hnLLlAHA~Ay~~ir~~~~~~q~g~IGi~-~~~~~~~P~~~~D~~aa~~~n~l~~~p~~d~I~~~~DFi 411 (654)
...| ..+. ..+++++|+..|.. +||-- ... +..+... ...+ ++..-.-.+|||
T Consensus 176 ---~~ey----~~ly---~~~~~~iK~~~p~~---~vGGp~~~~------~~~~~~~-~~l~------~~~~~~~~~Dfi 229 (486)
T PF01229_consen 176 ---PEEY----FELY---DATARAIKAVDPEL---KVGGPAFAW------AYDEWCE-DFLE------FCKGNNCPLDFI 229 (486)
T ss_dssp ---HHHH----HHHH---HHHHHHHHHH-TTS---EEEEEEEET------T-THHHH-HHHH------HHHHCT---SEE
T ss_pred ---HHHH----HHHH---HHHHHHHHHhCCCC---cccCccccc------cHHHHHH-HHHH------HHhcCCCCCCEE
Confidence 0112 2333 44777788888764 56632 111 1011100 0000 121223468999
Q ss_pred EeeccCcceeeCCCCcccCCCCcccCC--cccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCCC-----Ccc-ccHHHH
Q 006252 412 GINYYGQEVVSGPGLKLVETDEYSESG--RGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDE-----TDL-IRRPYV 483 (654)
Q Consensus 412 GINyYt~~~V~~~~~~~~~~~~~s~~G--~~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad~-----~D~-~Ri~YL 483 (654)
.++.|....... . ......... ..++| .+..+...+. .-...+.|+++||-+.+.. +|. .+..|+
T Consensus 230 S~H~y~~~~~~~----~-~~~~~~~~~~~~~~~~-~~~~~~~~~~-~e~~p~~~~~~tE~n~~~~~~~~~~dt~~~aA~i 302 (486)
T PF01229_consen 230 SFHSYGTDSAED----I-NENMYERIEDSRRLFP-ELKETRPIIN-DEADPNLPLYITEWNASISPRNPQHDTCFKAAYI 302 (486)
T ss_dssp EEEEE-BESESE------SS-EEEEB--HHHHHH-HHHHHHHHHH-TSSSTT--EEEEEEES-SSTT-GGGGSHHHHHHH
T ss_pred EEEecccccccc----c-chhHHhhhhhHHHHHH-HHHHHHHHHh-hccCCCCceeecccccccCCCcchhccccchhhH
Confidence 999998642210 0 000000000 01111 1222212222 1222357899999776532 233 334444
Q ss_pred HHHHHHHHHHHHcCCCeeEEEEeecccccCCCCC----CCCccceEEEcCCCCccccccchHHHHHHHHH
Q 006252 484 IEHLLAVYAAMITGVPVIGYLFWTISDNWEWADG----YGPKFGLVAVDRANNLARIPRPSYHLFTKVVT 549 (654)
Q Consensus 484 ~~hL~~v~kAi~dGV~V~GY~~WSLlDNfEW~~G----Y~~RFGL~~VD~~~~l~R~PK~Sa~wY~~ii~ 549 (654)
..+ +.. ..|..+.++.+|+|.|.||=..- +-.-|||+..+ .++||+++.|.-+-+
T Consensus 303 ~k~---lL~--~~~~~l~~~sywt~sD~Fee~~~~~~pf~ggfGLlt~~------gI~KPa~~A~~~L~~ 361 (486)
T PF01229_consen 303 AKN---LLS--NDGAFLDSFSYWTFSDRFEENGTPRKPFHGGFGLLTKL------GIPKPAYYAFQLLNK 361 (486)
T ss_dssp HH----HHH--HGGGT-SEEEES-SBS---TTSS-SSSSSS-S-SEECC------CEE-HHHHHHHHHTT
T ss_pred HHH---HHH--hhhhhhhhhhccchhhhhhccCCCCCceecchhhhhcc------CCCchHHHHHHHHHh
Confidence 332 111 24667788999999999984321 33468999776 489999988876544
No 21
>COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism]
Probab=98.67 E-value=1.5e-06 Score=92.24 Aligned_cols=263 Identities=22% Similarity=0.321 Sum_probs=154.5
Q ss_pred ccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEE-E-eccCCCcccccccCCCCChhhHHHHHHHHHHHHH
Q 006252 214 IDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVML-T-LFHHSLPAWAGEYGGWKLEKTIDYFMDFTRLVVD 291 (654)
Q Consensus 214 IsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiV-T-L~HwDLP~wL~~~GGW~n~~~vd~Fa~YA~~vfe 291 (654)
+-|--|+|+. |.+|+++-+ .+++-+++|||.--- | +.|--.|.|+.... |.-+...+...+|-..|++
T Consensus 67 mKwe~i~p~~------G~f~Fe~AD---~ia~FAr~h~m~lhGHtLvW~~q~P~W~~~~e-~~~~~~~~~~e~hI~tV~~ 136 (345)
T COG3693 67 MKWEAIEPER------GRFNFEAAD---AIANFARKHNMPLHGHTLVWHSQVPDWLFGDE-LSKEALAKMVEEHIKTVVG 136 (345)
T ss_pred cccccccCCC------CccCccchH---HHHHHHHHcCCeeccceeeecccCCchhhccc-cChHHHHHHHHHHHHHHHH
Confidence 3577888863 789987754 789999999987532 3 33667899985211 5668999999999999999
Q ss_pred HhCCccceEEEccCcceeeeccccCCCCCCCCCChhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCeEEE
Q 006252 292 SVSDIVDYWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSSTSTKSKVGV 371 (654)
Q Consensus 292 rfGDrVk~WiT~NEPnv~~~~GY~~G~~pPg~~~~~~~~~~~~~~~~~~~a~hnLLlAHA~Ay~~ir~~~~~~q~g~IGi 371 (654)
||.++|..|=+.|||-- .-.+|..-.|--+. ...+ + | ..|++.-|+..|+++ . +
T Consensus 137 rYkg~~~sWDVVNE~vd-d~g~~R~s~w~~~~----------~gpd-~------I----~~aF~~AreadP~Ak---L-~ 190 (345)
T COG3693 137 RYKGSVASWDVVNEAVD-DQGSLRRSAWYDGG----------TGPD-Y------I----KLAFHIAREADPDAK---L-V 190 (345)
T ss_pred hccCceeEEEecccccC-CCchhhhhhhhccC----------CccH-H------H----HHHHHHHHhhCCCce---E-E
Confidence 99999999999999963 21122111111100 0001 1 1 235666678887653 1 2
Q ss_pred EeeccccCCCCcccHHHHHH--HhcccCCccccccCC-CcceeEeeccCcceeeCCCCcccCCCCcccCCcccCcHHHHH
Q 006252 372 AHHVSFMRPYGLFDVTAVTL--ANTLTTFPYVDSISD-RLDFIGINYYGQEVVSGPGLKLVETDEYSESGRGVYPDGLFR 448 (654)
Q Consensus 372 ~~~~~~~~P~~~~D~~aa~~--~n~l~~~p~~d~I~~-~~DFiGINyYt~~~V~~~~~~~~~~~~~s~~G~~i~P~GL~~ 448 (654)
.+.. +.++.++... .|-+. .+.. +| +.|-||++-= ++ .+|.. ++-.+.
T Consensus 191 ~NDY------~ie~~~~kr~~~~nlI~---~Lke-kG~pIDgiG~QsH----~~--------------~~~~~-~~~~~~ 241 (345)
T COG3693 191 INDY------SIEGNPAKRNYVLNLIE---ELKE-KGAPIDGIGIQSH----FS--------------GDGPS-IEKMRA 241 (345)
T ss_pred eecc------cccCChHHHHHHHHHHH---HHHH-CCCCccceeeeee----ec--------------CCCCC-HHHHHH
Confidence 2222 1122222111 11000 0111 33 4899999742 11 12222 222344
Q ss_pred HHHHHHHHhCCCCCCEEEeecCCCCC--C-ccccHHHHHHHH--HHHHHHHHcCCCeeEEEEeecccccCCCCCCCCccc
Q 006252 449 VLHQFHERYKHLNLPFIITENGVSDE--T-DLIRRPYVIEHL--LAVYAAMITGVPVIGYLFWTISDNWEWADGYGPKFG 523 (654)
Q Consensus 449 ~L~~i~~rY~~~~~PI~ITENG~ad~--~-D~~Ri~YL~~hL--~~v~kAi~dGV~V~GY~~WSLlDNfEW~~GY~~RFG 523 (654)
.+..+... +.||+|||.-+.+. . +..|..-.+... ..-.-.....-.|.+.+.|.++|+++|..|..++++
T Consensus 242 a~~~~~k~----Gl~i~VTELD~~~~~P~~~~p~~~~~~~~~~~~~f~~~~~~~~~v~~it~WGi~D~ySWl~g~~~~~~ 317 (345)
T COG3693 242 ALLKFSKL----GLPIYVTELDMSDYTPDSGAPRLYLQKAASRAKAFLLLLLNPNQVKAITFWGITDRYSWLRGRDPRRD 317 (345)
T ss_pred HHHHHhhc----CCCceEEEeeeeccCCCCccHHHHHHHHHHHHHHHHHHHhcccccceEEEeeeccCcccccCCccCcC
Confidence 44443322 59999999998862 2 222222222211 111112234666999999999999999999888885
Q ss_pred ----eEEEcCCCCccccccchHHHHHHHHHc
Q 006252 524 ----LVAVDRANNLARIPRPSYHLFTKVVTT 550 (654)
Q Consensus 524 ----L~~VD~~~~l~R~PK~Sa~wY~~ii~~ 550 (654)
|. +|- + =.|||...+.+++...
T Consensus 318 ~~rPl~-~D~--n--~~pKPa~~aI~e~la~ 343 (345)
T COG3693 318 GLRPLL-FDD--N--YQPKPAYKAIAEVLAP 343 (345)
T ss_pred CCCCcc-cCC--C--CCcchHHHHHHHHhcC
Confidence 22 232 2 3799999998876654
No 22
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A ....
Probab=98.33 E-value=2.4e-05 Score=82.33 Aligned_cols=92 Identities=16% Similarity=0.198 Sum_probs=60.3
Q ss_pred CCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccccC
Q 006252 192 WSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYG 271 (654)
Q Consensus 192 y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~~G 271 (654)
...++.|+.+||++|+|++|++- .|.. .++++.|-+.||-++.-+..+..-.|- ..|
T Consensus 35 ~~~~~~d~~l~k~~G~N~iR~~h-----~p~~-----------------~~~~~~cD~~GilV~~e~~~~~~~~~~-~~~ 91 (298)
T PF02836_consen 35 DEAMERDLELMKEMGFNAIRTHH-----YPPS-----------------PRFYDLCDELGILVWQEIPLEGHGSWQ-DFG 91 (298)
T ss_dssp HHHHHHHHHHHHHTT-SEEEETT-----S--S-----------------HHHHHHHHHHT-EEEEE-S-BSCTSSS-STS
T ss_pred HHHHHHHHHHHHhcCcceEEccc-----ccCc-----------------HHHHHHHhhcCCEEEEeccccccCccc-cCC
Confidence 35678999999999999999943 2321 146677888999998776432211111 111
Q ss_pred C----CCChhhHHHHHHHHHHHHHHhCCc--cceEEEccCc
Q 006252 272 G----WKLEKTIDYFMDFTRLVVDSVSDI--VDYWVTFNEP 306 (654)
Q Consensus 272 G----W~n~~~vd~Fa~YA~~vferfGDr--Vk~WiT~NEP 306 (654)
- -.+++..+.+.+-.+.+++++... |-.|...||+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~v~~~~NHPSIi~W~~gNE~ 132 (298)
T PF02836_consen 92 NCNYDADDPEFRENAEQELREMVRRDRNHPSIIMWSLGNES 132 (298)
T ss_dssp CTSCTTTSGGHHHHHHHHHHHHHHHHTT-TTEEEEEEEESS
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHcCcCcCchheeecCccC
Confidence 0 135778888888888899898777 8889999998
No 23
>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins.
Probab=97.95 E-value=0.00014 Score=74.93 Aligned_cols=78 Identities=24% Similarity=0.408 Sum_probs=56.3
Q ss_pred CCcceeEeeccCcceeeCCCCcccCCCCcccCCcccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCC----CCccccHH
Q 006252 406 DRLDFIGINYYGQEVVSGPGLKLVETDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSD----ETDLIRRP 481 (654)
Q Consensus 406 ~~~DFiGINyYt~~~V~~~~~~~~~~~~~s~~G~~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad----~~D~~Ri~ 481 (654)
..+||++||+|.. .+.++...|..++++|+ +||+|||.|+.+ .++..-..
T Consensus 136 ~~~D~iavH~Y~~-----------------------~~~~~~~~i~~~~~~~~---kPIWITEf~~~~~~~~~~~~~~~~ 189 (239)
T PF11790_consen 136 CRVDFIAVHWYGG-----------------------DADDFKDYIDDLHNRYG---KPIWITEFGCWNGGSQGSDEQQAS 189 (239)
T ss_pred CCccEEEEecCCc-----------------------CHHHHHHHHHHHHHHhC---CCEEEEeecccCCCCCCCHHHHHH
Confidence 4789999999921 14467889999999996 899999999753 34444555
Q ss_pred HHHHHHHHHHHHHHcCCCeeEEEEeecccccC
Q 006252 482 YVIEHLLAVYAAMITGVPVIGYLFWTISDNWE 513 (654)
Q Consensus 482 YL~~hL~~v~kAi~dGV~V~GY~~WSLlDNfE 513 (654)
|+++-+. .++.--.|.+|++.+.++...
T Consensus 190 fl~~~~~----~ld~~~~VeryawF~~~~~~~ 217 (239)
T PF11790_consen 190 FLRQALP----WLDSQPYVERYAWFGFMNDGS 217 (239)
T ss_pred HHHHHHH----HHhcCCCeeEEEecccccccC
Confidence 6555444 444457799999999555443
No 24
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism]
Probab=97.82 E-value=0.0099 Score=63.14 Aligned_cols=209 Identities=24% Similarity=0.330 Sum_probs=121.9
Q ss_pred HHH-HHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEec---cCCCcccccccC
Q 006252 196 DIE-LKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF---HHSLPAWAGEYG 271 (654)
Q Consensus 196 ~eD-i~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~---HwDLP~wL~~~G 271 (654)
++| ++.+|+.|+|.+|+-| |..=--+.. +|--|.-| -++.--.+-.+...+||++++..| ||.=|..-...-
T Consensus 65 ~qD~~~iLK~~GvNyvRlRv-wndP~dsng-n~yggGnn--D~~k~ieiakRAk~~GmKVl~dFHYSDfwaDPakQ~kPk 140 (403)
T COG3867 65 RQDALQILKNHGVNYVRLRV-WNDPYDSNG-NGYGGGNN--DLKKAIEIAKRAKNLGMKVLLDFHYSDFWADPAKQKKPK 140 (403)
T ss_pred HHHHHHHHHHcCcCeEEEEE-ecCCccCCC-CccCCCcc--hHHHHHHHHHHHHhcCcEEEeeccchhhccChhhcCCcH
Confidence 345 7999999999999965 321111100 11111122 134445677889999999999998 566665544456
Q ss_pred CCCC---hhhHHHHHHHHHHHHHHh---CCccceEEEccCcceeeeccccCCCCCCCCCChhhhhhcCCCchhHHHHHHH
Q 006252 272 GWKL---EKTIDYFMDFTRLVVDSV---SDIVDYWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATSALPTGVFNQAMHW 345 (654)
Q Consensus 272 GW~n---~~~vd~Fa~YA~~vferf---GDrVk~WiT~NEPnv~~~~GY~~G~~pPg~~~~~~~~~~~~~~~~~~~a~hn 345 (654)
.|.+ ++.-...-+|.+.+...+ |=..+.-..=||-+--. .||-|... .| .-+-.
T Consensus 141 aW~~l~fe~lk~avy~yTk~~l~~m~~eGi~pdmVQVGNEtn~gf-------lwp~Ge~~------------~f-~k~a~ 200 (403)
T COG3867 141 AWENLNFEQLKKAVYSYTKYVLTTMKKEGILPDMVQVGNETNGGF-------LWPDGEGR------------NF-DKMAA 200 (403)
T ss_pred HhhhcCHHHHHHHHHHHHHHHHHHHHHcCCCccceEeccccCCce-------eccCCCCc------------Ch-HHHHH
Confidence 7865 445556667777776666 43455555678876211 35644321 12 12334
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCeEEEEeeccccCCCCcccHHHHHHHhcccCCcccccc---CCCcceeEeeccCcceee
Q 006252 346 MAIAHSKAYDYIHAKSSTSTKSKVGVAHHVSFMRPYGLFDVTAVTLANTLTTFPYVDSI---SDRLDFIGINYYGQEVVS 422 (654)
Q Consensus 346 LLlAHA~Ay~~ir~~~~~~q~g~IGi~~~~~~~~P~~~~D~~aa~~~n~l~~~p~~d~I---~~~~DFiGINyYt~~~V~ 422 (654)
|+.+ +++++|+..|. |-|++|.. +|.... ++. .++|.| .-.+|.||++||+.
T Consensus 201 L~n~---g~~avrev~p~-----ikv~lHla--~g~~n~----------~y~-~~fd~ltk~nvdfDVig~SyYpy---- 255 (403)
T COG3867 201 LLNA---GIRAVREVSPT-----IKVALHLA--EGENNS----------LYR-WIFDELTKRNVDFDVIGSSYYPY---- 255 (403)
T ss_pred HHHH---HhhhhhhcCCC-----ceEEEEec--CCCCCc----------hhh-HHHHHHHHcCCCceEEeeecccc----
Confidence 5644 56667877664 33555543 221110 000 012222 34689999999974
Q ss_pred CCCCcccCCCCcccCCcccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCC
Q 006252 423 GPGLKLVETDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVS 472 (654)
Q Consensus 423 ~~~~~~~~~~~~s~~G~~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~a 472 (654)
|.-.-..|...|..+..||. +.++|.|.+..
T Consensus 256 ----------------Whgtl~nL~~nl~dia~rY~---K~VmV~Etay~ 286 (403)
T COG3867 256 ----------------WHGTLNNLTTNLNDIASRYH---KDVMVVETAYT 286 (403)
T ss_pred ----------------ccCcHHHHHhHHHHHHHHhc---CeEEEEEecce
Confidence 11112247778999999995 77999999885
No 25
>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed
Probab=97.71 E-value=0.0017 Score=79.66 Aligned_cols=220 Identities=18% Similarity=0.214 Sum_probs=130.1
Q ss_pred CCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEe----ccCCCcccc
Q 006252 192 WSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTL----FHHSLPAWA 267 (654)
Q Consensus 192 y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL----~HwDLP~wL 267 (654)
...++.||++||++|+|++|+| ..|.. ..+.+.|=+.||-+|.-. +.|.....+
T Consensus 354 ~e~~~~dl~lmK~~g~NavR~s-----HyP~~-----------------~~fydlcDe~GllV~dE~~~e~~g~~~~~~~ 411 (1021)
T PRK10340 354 MDRVEKDIQLMKQHNINSVRTA-----HYPND-----------------PRFYELCDIYGLFVMAETDVESHGFANVGDI 411 (1021)
T ss_pred HHHHHHHHHHHHHCCCCEEEec-----CCCCC-----------------HHHHHHHHHCCCEEEECCcccccCccccccc
Confidence 4678899999999999999996 35542 145667778999877643 112111100
Q ss_pred cccCCC--CChhhHHHHHHHHHHHHHHhCCc--cceEEEccCcceeeeccccCCCCCCCCCChhhhhhcCCCchhHHHHH
Q 006252 268 GEYGGW--KLEKTIDYFMDFTRLVVDSVSDI--VDYWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATSALPTGVFNQAM 343 (654)
Q Consensus 268 ~~~GGW--~n~~~vd~Fa~YA~~vferfGDr--Vk~WiT~NEPnv~~~~GY~~G~~pPg~~~~~~~~~~~~~~~~~~~a~ 343 (654)
.| .++...+.|.+=++.++++.... |-.|..-||.. + | .
T Consensus 412 ----~~~~~~p~~~~~~~~~~~~mV~RdrNHPSIi~WslGNE~~------~-------g------------------~-- 454 (1021)
T PRK10340 412 ----SRITDDPQWEKVYVDRIVRHIHAQKNHPSIIIWSLGNESG------Y-------G------------------C-- 454 (1021)
T ss_pred ----ccccCCHHHHHHHHHHHHHHHHhCCCCCEEEEEECccCcc------c-------c------------------H--
Confidence 11 23445566777788899998876 66788888752 1 0 0
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCCeEEEEeeccccCCCCcccHHHHHHHhcccCCccccccCCCcceeEeeccCcceeeC
Q 006252 344 HWMAIAHSKAYDYIHAKSSTSTKSKVGVAHHVSFMRPYGLFDVTAVTLANTLTTFPYVDSISDRLDFIGINYYGQEVVSG 423 (654)
Q Consensus 344 hnLLlAHA~Ay~~ir~~~~~~q~g~IGi~~~~~~~~P~~~~D~~aa~~~n~l~~~p~~d~I~~~~DFiGINyYt~~~V~~ 423 (654)
+ |.++++.+|+.+|... | .... + ......|++|.+| ..
T Consensus 455 -~----~~~~~~~~k~~DptR~---v--~~~~---------~-----------------~~~~~~Dv~~~~Y-~~----- 492 (1021)
T PRK10340 455 -N----IRAMYHAAKALDDTRL---V--HYEE---------D-----------------RDAEVVDVISTMY-TR----- 492 (1021)
T ss_pred -H----HHHHHHHHHHhCCCce---E--EeCC---------C-----------------cCccccceecccc-CC-----
Confidence 1 2346677888876531 2 1100 0 0122468877543 21
Q ss_pred CCCcccCCCCcccCCcccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCCCCccccHHHHHHHHHHHHHHHHcCCCeeEE
Q 006252 424 PGLKLVETDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDETDLIRRPYVIEHLLAVYAAMITGVPVIGY 503 (654)
Q Consensus 424 ~~~~~~~~~~~s~~G~~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad~~D~~Ri~YL~~hL~~v~kAi~dGV~V~GY 503 (654)
...+..+.+. . .++|++++|.|-+..+... -+.+|.. ++++-=.+.|=
T Consensus 493 -----------------------~~~~~~~~~~-~-~~kP~i~~Ey~hamgn~~g---~~~~yw~----~~~~~p~l~Gg 540 (1021)
T PRK10340 493 -----------------------VELMNEFGEY-P-HPKPRILCEYAHAMGNGPG---GLTEYQN----VFYKHDCIQGH 540 (1021)
T ss_pred -----------------------HHHHHHHHhC-C-CCCcEEEEchHhccCCCCC---CHHHHHH----HHHhCCceeEE
Confidence 1112222222 2 2589999999877543221 1345543 45556678999
Q ss_pred EEeecccccCCC---C-----CCCCcc------------ceEEEcCCCCccccccchHHHHHHHHHc
Q 006252 504 LFWTISDNWEWA---D-----GYGPKF------------GLVAVDRANNLARIPRPSYHLFTKVVTT 550 (654)
Q Consensus 504 ~~WSLlDNfEW~---~-----GY~~RF------------GL~~VD~~~~l~R~PK~Sa~wY~~ii~~ 550 (654)
|+|.++|---.. + +|.--| ||+.. .|+|||.++.|+.+.+-
T Consensus 541 fiW~~~D~~~~~~~~~G~~~~~ygGd~g~~p~~~~f~~~Glv~~------dr~p~p~~~e~k~~~~p 601 (1021)
T PRK10340 541 YVWEWCDHGIQAQDDNGNVWYKYGGDYGDYPNNYNFCIDGLIYP------DQTPGPGLKEYKQVIAP 601 (1021)
T ss_pred eeeecCcccccccCCCCCEEEEECCCCCCCCCCcCcccceeECC------CCCCChhHHHHHHhcce
Confidence 999999941111 1 132222 56533 38999999999999775
No 26
>COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism]
Probab=97.41 E-value=0.0008 Score=74.53 Aligned_cols=110 Identities=16% Similarity=0.252 Sum_probs=81.0
Q ss_pred HHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccC-hhHHHHHHHHHHHHHHcCCeEEEEeccCCCccccccc----
Q 006252 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVN-FAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEY---- 270 (654)
Q Consensus 196 ~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN-~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~~---- 270 (654)
++|+..||+.|+|++|+.|.|-.+.+.. +....+. ...+.+.+++|+..++.||.+++.||+..-++--.+.
T Consensus 76 ~~~~~~ik~~G~n~VRiPi~~~~~~~~~---~~~p~~~~~~~~~~ld~~I~~a~~~gi~V~iD~H~~~~~~~~~~~s~~~ 152 (407)
T COG2730 76 EEDFDQIKSAGFNAVRIPIGYWALQATD---GDNPYLIGLTQLKILDEAINWAKKLGIYVLIDLHGYPGGNNGHEHSGYT 152 (407)
T ss_pred hhHHHHHHHcCCcEEEcccchhhhhccC---CCCCCeecchHHHHHHHHHHHHHhcCeeEEEEecccCCCCCCcCccccc
Confidence 8999999999999999999855554421 0112232 4445588999999999999999999986633433222
Q ss_pred CCCC-ChhhHHHHHHHHHHHHHHhCCc--cceEEEccCcce
Q 006252 271 GGWK-LEKTIDYFMDFTRLVVDSVSDI--VDYWVTFNEPHV 308 (654)
Q Consensus 271 GGW~-n~~~vd~Fa~YA~~vferfGDr--Vk~WiT~NEPnv 308 (654)
+.+. ....++.+.+--+.++.+|++. |--..++|||+-
T Consensus 153 ~~~~~~~~~~~~~~~~w~~ia~~f~~~~~VIg~~~~NEP~~ 193 (407)
T COG2730 153 SDYKEENENVEATIDIWKFIANRFKNYDTVIGFELINEPNG 193 (407)
T ss_pred ccccccchhHHHHHHHHHHHHHhccCCCceeeeeeecCCcc
Confidence 2332 3667799999999999999984 344568999994
No 27
>COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism]
Probab=97.35 E-value=0.00035 Score=81.47 Aligned_cols=125 Identities=22% Similarity=0.316 Sum_probs=90.9
Q ss_pred CCCCcccccCCCCcHHHHHHHHhcCCCeEEe-cccccccCCCCCCCCCccccChhHHHHHHHH-HHHHHHcCCeEEEEe-
Q 006252 182 VPHPEERLRFWSDPDIELKLAKDTGVSVFRL-GIDWSRIMPAEPVNGLKETVNFAALERYKWI-INRVRSYGMKVMLTL- 258 (654)
Q Consensus 182 ~~~pe~a~~~y~~y~eDi~Lmk~lGv~~yRf-SIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~l-Id~L~~~GI~PiVTL- 258 (654)
.++|++..+ +-+++|++.||++|+|.+|. -++|++++|++ |++|...+ |.. |+.+.+.||..++.-
T Consensus 21 ~y~p~~~p~--~~w~ddl~~mk~~G~N~V~ig~faW~~~eP~e------G~fdf~~~---D~~~l~~a~~~Gl~vil~t~ 89 (673)
T COG1874 21 DYYPERWPR--ETWMDDLRKMKALGLNTVRIGYFAWNLHEPEE------GKFDFTWL---DEIFLERAYKAGLYVILRTG 89 (673)
T ss_pred ccChHHCCH--HHHHHHHHHHHHhCCCeeEeeeEEeeccCccc------cccCcccc---hHHHHHHHHhcCceEEEecC
Confidence 566777666 77899999999999999999 56999999985 88998744 455 999999999999876
Q ss_pred ccCCCccccc----------------ccCCCCChhhH-HHHHHHHHH----HHHH-hCCc--cceEEEccCcce-eeecc
Q 006252 259 FHHSLPAWAG----------------EYGGWKLEKTI-DYFMDFTRL----VVDS-VSDI--VDYWVTFNEPHV-FCMLT 313 (654)
Q Consensus 259 ~HwDLP~wL~----------------~~GGW~n~~~v-d~Fa~YA~~----vfer-fGDr--Vk~WiT~NEPnv-~~~~G 313 (654)
--..-|.|+. ..|+|.+-..+ ..+..|++. +.+| ||+. |--|-+=||=.. .|+..
T Consensus 90 P~g~~P~Wl~~~~PeiL~~~~~~~~~~~g~r~~~~~~~~~Yr~~~~~i~~~irer~~~~~~~v~~w~~dneY~~~~~~~~ 169 (673)
T COG1874 90 PTGAPPAWLAKKYPEILAVDENGRVRSDGARENICPVSPVYREYLDRILQQIRERLYGNGPAVITWQNDNEYGGHPCYCD 169 (673)
T ss_pred CCCCCchHHhcCChhheEecCCCcccCCCcccccccccHHHHHHHHHHHHHHHHHHhccCCceeEEEccCccCCcccccc
Confidence 4455566652 24888653333 357777777 6677 6655 777888887333 34444
Q ss_pred ccCC
Q 006252 314 YCAG 317 (654)
Q Consensus 314 Y~~G 317 (654)
|+..
T Consensus 170 ~~~~ 173 (673)
T COG1874 170 YCQA 173 (673)
T ss_pred ccHH
Confidence 4433
No 28
>PRK09525 lacZ beta-D-galactosidase; Reviewed
Probab=97.33 E-value=0.01 Score=73.01 Aligned_cols=233 Identities=17% Similarity=0.149 Sum_probs=131.6
Q ss_pred CCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEec---cCCCccccc
Q 006252 192 WSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF---HHSLPAWAG 268 (654)
Q Consensus 192 y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~---HwDLP~wL~ 268 (654)
...++.||++||++|+|++|+| ..|.. ..+.+.|=+.||-+|--.. |--.|..
T Consensus 370 ~e~~~~di~lmK~~g~NaVR~s-----HyP~~-----------------p~fydlcDe~GilV~dE~~~e~hg~~~~~-- 425 (1027)
T PRK09525 370 EETMVQDILLMKQHNFNAVRCS-----HYPNH-----------------PLWYELCDRYGLYVVDEANIETHGMVPMN-- 425 (1027)
T ss_pred HHHHHHHHHHHHHCCCCEEEec-----CCCCC-----------------HHHHHHHHHcCCEEEEecCccccCCcccc--
Confidence 4567889999999999999996 34432 1345667778998886642 2111110
Q ss_pred ccCCCCChhhHHHHHHHHHHHHHHhCCc--cceEEEccCcceeeeccccCCCCCCCCCChhhhhhcCCCchhHHHHHHHH
Q 006252 269 EYGGWKLEKTIDYFMDFTRLVVDSVSDI--VDYWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATSALPTGVFNQAMHWM 346 (654)
Q Consensus 269 ~~GGW~n~~~vd~Fa~YA~~vferfGDr--Vk~WiT~NEPnv~~~~GY~~G~~pPg~~~~~~~~~~~~~~~~~~~a~hnL 346 (654)
. ...+++..+.+.+=++.+++|.... |-.|...||+. + | . +
T Consensus 426 ~--~~~dp~~~~~~~~~~~~mV~RdrNHPSIi~WSlgNE~~------~--g-----~---------------------~- 468 (1027)
T PRK09525 426 R--LSDDPRWLPAMSERVTRMVQRDRNHPSIIIWSLGNESG------H--G-----A---------------------N- 468 (1027)
T ss_pred C--CCCCHHHHHHHHHHHHHHHHhCCCCCEEEEEeCccCCC------c--C-----h---------------------h-
Confidence 0 0124566667777788888888877 77888888862 1 0 0 0
Q ss_pred HHHHHHHHHHHHhhCCCCCCCeEEEEeeccccCCCCcccHHHHHHHhcccCCccccccCCCcceeEeeccCcceeeCCCC
Q 006252 347 AIAHSKAYDYIHAKSSTSTKSKVGVAHHVSFMRPYGLFDVTAVTLANTLTTFPYVDSISDRLDFIGINYYGQEVVSGPGL 426 (654)
Q Consensus 347 LlAHA~Ay~~ir~~~~~~q~g~IGi~~~~~~~~P~~~~D~~aa~~~n~l~~~p~~d~I~~~~DFiGINyYt~~~V~~~~~ 426 (654)
|.++++.+|+.+|... | ...... .+ ....|.++-.|-..
T Consensus 469 ---~~~l~~~~k~~DptRp---V--~y~~~~------~~-------------------~~~~Dv~~~my~~~-------- 507 (1027)
T PRK09525 469 ---HDALYRWIKSNDPSRP---V--QYEGGG------AD-------------------TAATDIICPMYARV-------- 507 (1027)
T ss_pred ---HHHHHHHHHhhCCCCc---E--EECCCC------CC-------------------CCccccccCCCCCc--------
Confidence 1345667777776421 1 111000 00 01234443333210
Q ss_pred cccCCCCcccCCcccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCCCCccccHHHHHHHHHHHHHHHHcCCCeeEEEEe
Q 006252 427 KLVETDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDETDLIRRPYVIEHLLAVYAAMITGVPVIGYLFW 506 (654)
Q Consensus 427 ~~~~~~~~s~~G~~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad~~D~~Ri~YL~~hL~~v~kAi~dGV~V~GY~~W 506 (654)
.++..++..-...|..+.+... .++|++++|-|-+..+.. -.|++|.. +++.-=.+.|-|+|
T Consensus 508 ----------~~~~~~~~~~~~~~~~~~~~~~-~~kP~i~cEY~Hamgn~~---g~l~~yw~----~~~~~~~~~GgfIW 569 (1027)
T PRK09525 508 ----------DEDQPFPAVPKWSIKKWISLPG-ETRPLILCEYAHAMGNSL---GGFAKYWQ----AFRQYPRLQGGFIW 569 (1027)
T ss_pred ----------cccccccccchHHHHHHHhcCC-CCCCEEEEechhcccCcC---ccHHHHHH----HHhcCCCeeEEeeE
Confidence 0111111111212333333332 258999999998765432 23566654 44445668999999
Q ss_pred ecccccCCC---C-----CCCCcc------------ceEEEcCCCCccccccchHHHHHHHHHc
Q 006252 507 TISDNWEWA---D-----GYGPKF------------GLVAVDRANNLARIPRPSYHLFTKVVTT 550 (654)
Q Consensus 507 SLlDNfEW~---~-----GY~~RF------------GL~~VD~~~~l~R~PK~Sa~wY~~ii~~ 550 (654)
-++|.--.. + +|+--| ||+.- .|+|+|...-+|++.+-
T Consensus 570 ~w~Dqg~~~~~~~G~~~~~YGGDfgd~p~d~nFc~dGlv~~------dR~p~p~~~E~K~v~qp 627 (1027)
T PRK09525 570 DWVDQGLTKYDENGNPWWAYGGDFGDTPNDRQFCMNGLVFP------DRTPHPALYEAKHAQQF 627 (1027)
T ss_pred eccCcceeeECCCCCEEEEECCcCCCCCCCCCceeceeECC------CCCCCccHHHHHhhcCc
Confidence 999864311 1 133334 44322 48999999999999763
No 29
>PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B.
Probab=96.84 E-value=0.22 Score=55.03 Aligned_cols=273 Identities=19% Similarity=0.257 Sum_probs=113.7
Q ss_pred HhcCCCeEEecc---cc------------cccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccc
Q 006252 203 KDTGVSVFRLGI---DW------------SRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWA 267 (654)
Q Consensus 203 k~lGv~~yRfSI---sW------------sRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL 267 (654)
+.+|++.+||.| ++ .|.+-.. ..++.+|+.+-+--+.++...+++|+.-++ ++-+.=|.|+
T Consensus 57 ~GlGLSI~RyNIGgGs~~~~d~~~i~~~~rr~e~f~---~~dg~yDW~~D~gQrwfL~~Ak~rGV~~f~-aFSNSPP~~M 132 (384)
T PF14587_consen 57 KGLGLSIWRYNIGGGSAEQGDSSGIRDPWRRAESFL---PADGSYDWDADAGQRWFLKAAKERGVNIFE-AFSNSPPWWM 132 (384)
T ss_dssp -S---S-EEEE---STTTTTTSS--SSSTT----SB----TTS-B-TTSSHHHHHHHHHHHHTT---EE-EE-SSS-GGG
T ss_pred CCceeeeeeeccccCCcccccCccCCCcccCCcccc---CCCCCcCCCCCHHHHHHHHHHHHcCCCeEE-EeecCCCHHH
Confidence 458999999988 33 2321111 124677776655667899999999999766 7777777776
Q ss_pred cccC----C-----CCChhhHHHHHHHHHHHHHHh---CCccceEEEccCcceeeeccccCCCCCCCCCChhhhhhcCCC
Q 006252 268 GEYG----G-----WKLEKTIDYFMDFTRLVVDSV---SDIVDYWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATSALP 335 (654)
Q Consensus 268 ~~~G----G-----W~n~~~vd~Fa~YA~~vferf---GDrVk~WiT~NEPnv~~~~GY~~G~~pPg~~~~~~~~~~~~~ 335 (654)
...| + =+.++..+.|++|-..|+++| |=.|+|-.+||||..- + . .|. -.|++
T Consensus 133 T~NG~~~g~~~~~~NLk~d~y~~FA~YLa~Vv~~~~~~GI~f~~IsP~NEP~~~-W-~--~~~-QEG~~----------- 196 (384)
T PF14587_consen 133 TKNGSASGGDDGSDNLKPDNYDAFADYLADVVKHYKKWGINFDYISPFNEPQWN-W-A--GGS-QEGCH----------- 196 (384)
T ss_dssp SSSSSSB-S-SSS-SS-TT-HHHHHHHHHHHHHHHHCTT--EEEEE--S-TTS--G-G----S-S-B-------------
T ss_pred hcCCCCCCCCccccccChhHHHHHHHHHHHHHHHHHhcCCccceeCCcCCCCCC-C-C--CCC-cCCCC-----------
Confidence 4322 1 145788899999999999888 4458999999999832 2 1 110 01111
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeeccccCCCCc-c-----cHHHHHHHhcccCCccccccCCCcc
Q 006252 336 TGVFNQAMHWMAIAHSKAYDYIHAKSSTSTKSKVGVAHHVSFMRPYGL-F-----DVTAVTLANTLTTFPYVDSISDRLD 409 (654)
Q Consensus 336 ~~~~~~a~hnLLlAHA~Ay~~ir~~~~~~q~g~IGi~~~~~~~~P~~~-~-----D~~aa~~~n~l~~~p~~d~I~~~~D 409 (654)
... .-...++++ ....+++... ..+|.+.-...+-+-+.. . +.....+.+.-. -.++..+..-..
T Consensus 197 ~~~--~e~a~vI~~---L~~~L~~~GL---~t~I~~~Ea~~~~~l~~~~~~~~~r~~~i~~ff~~~s-~~yi~~l~~v~~ 267 (384)
T PF14587_consen 197 FTN--EEQADVIRA---LDKALKKRGL---STKISACEAGDWEYLYKTDKNDWGRGNQIEAFFNPDS-STYIGDLPNVPN 267 (384)
T ss_dssp --H--HHHHHHHHH---HHHHHHHHT----S-EEEEEEESSGGGGS---S-TTS---HHHHHHSTTS-TT--TT-TTEEE
T ss_pred CCH--HHHHHHHHH---HHHHHHhcCC---CceEEecchhhHHHHhhccCCchhhhhhHHhhcCCCc-hhhhhccccchh
Confidence 000 111223322 2222444443 345766555544332221 0 000001101000 011211222223
Q ss_pred eeEeeccCcceeeCCCCcccCCCCcccCCcccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCCCC-------ccccHHH
Q 006252 410 FIGINYYGQEVVSGPGLKLVETDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDET-------DLIRRPY 482 (654)
Q Consensus 410 FiGINyYt~~~V~~~~~~~~~~~~~s~~G~~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad~~-------D~~Ri~Y 482 (654)
.|+-|-|=+ ...+. .-..+|+.|..--++|+. +..++-||-.+-..+ ...|-..
T Consensus 268 ~i~~HsYwt-----------------~~~~~-~l~~~R~~~~~~~~~~~~-~~~~wqtE~~il~~~~~~~~~~g~~~~~~ 328 (384)
T PF14587_consen 268 IISGHSYWT-----------------DSPWD-DLRDIRKQLADKLDKYSP-GLKYWQTEYCILGDNYEIIEGGGYDRDLG 328 (384)
T ss_dssp EEEE--TT------------------SSSHH-HHHHHHHHHHHHHHTTSS---EEEE----S----TTT-SSS-HHHHHH
T ss_pred heeeccccc-----------------CCCHH-HHHHHHHHHHHHHHhhCc-CCceeeeeeeeccCCcccccCCCcccchh
Confidence 333333311 11110 001245556555566732 578999999876421 1125555
Q ss_pred HHHHHHHHHHHHH---cCCCeeEEEEeecccccCCCCCCCCccceEEEcCC
Q 006252 483 VIEHLLAVYAAMI---TGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRA 530 (654)
Q Consensus 483 L~~hL~~v~kAi~---dGV~V~GY~~WSLlDNfEW~~GY~~RFGL~~VD~~ 530 (654)
+.-.|. |.+-|- -=.++...-+|.-+.-+.|.+ ||++||..
T Consensus 329 m~~aLy-~arviH~DL~~anassW~wW~a~~~~~ykd------gli~i~~~ 372 (384)
T PF14587_consen 329 MDTALY-VARVIHNDLTYANASSWQWWTAISPYDYKD------GLIYIDKN 372 (384)
T ss_dssp H--HHH-HHHHHHHHHHTS--SEEEEEESEESS--SS------SSEEEE-S
T ss_pred HHHHHH-HHHHHHhhhhhcccchhHHHHHhccccccC------ceEEEcCC
Confidence 544444 233342 257889999999987666655 99999975
No 30
>PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane. It includes Candida albicans (Yeast) pH-regulated protein, which is required for apical growth and plays a role in morphogenesis and Saccharomyces cerevisiae glycolipid anchored surface protein.; PDB: 2W61_A 2W62_A 2W63_A.
Probab=96.69 E-value=0.056 Score=58.08 Aligned_cols=78 Identities=15% Similarity=0.203 Sum_probs=43.2
Q ss_pred CcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCccc-ccccCC
Q 006252 194 DPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAW-AGEYGG 272 (654)
Q Consensus 194 ~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~w-L~~~GG 272 (654)
..+.||.+||+||+|++|.= -|-|+ . + .+.-+..|-+.||-.++.|- .|.- +....-
T Consensus 54 ~C~rDi~~l~~LgiNtIRVY----~vdp~---------~-----n-Hd~CM~~~~~aGIYvi~Dl~---~p~~sI~r~~P 111 (314)
T PF03198_consen 54 ACKRDIPLLKELGINTIRVY----SVDPS---------K-----N-HDECMSAFADAGIYVILDLN---TPNGSINRSDP 111 (314)
T ss_dssp HHHHHHHHHHHHT-SEEEES-------TT---------S--------HHHHHHHHHTT-EEEEES----BTTBS--TTS-
T ss_pred HHHHhHHHHHHcCCCEEEEE----EeCCC---------C-----C-HHHHHHHHHhCCCEEEEecC---CCCccccCCCC
Confidence 34679999999999999973 23332 1 2 46788889999999999994 5532 222122
Q ss_pred CCChhhHHHHHHHHHHHHHHhCC
Q 006252 273 WKLEKTIDYFMDFTRLVVDSVSD 295 (654)
Q Consensus 273 W~n~~~vd~Fa~YA~~vferfGD 295 (654)
|.. =....|.+|... ++.|..
T Consensus 112 ~~s-w~~~l~~~~~~v-id~fa~ 132 (314)
T PF03198_consen 112 APS-WNTDLLDRYFAV-IDAFAK 132 (314)
T ss_dssp ------HHHHHHHHHH-HHHHTT
T ss_pred cCC-CCHHHHHHHHHH-HHHhcc
Confidence 111 123556666554 445543
No 31
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B ....
Probab=96.07 E-value=0.011 Score=63.53 Aligned_cols=96 Identities=17% Similarity=0.233 Sum_probs=59.8
Q ss_pred CCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEec-----cC---CCc
Q 006252 193 SDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF-----HH---SLP 264 (654)
Q Consensus 193 ~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~-----Hw---DLP 264 (654)
..|++-++.||++|+|++-+-|.|.-.+|.+ |++|..|..=.+.+|+.+.++||.+++-.= -| .+|
T Consensus 24 ~~W~~~l~k~ka~G~n~v~~yv~W~~he~~~------g~~df~g~~dl~~f~~~a~~~gl~vilrpGpyi~aE~~~gG~P 97 (319)
T PF01301_consen 24 EYWRDRLQKMKAAGLNTVSTYVPWNLHEPEE------GQFDFTGNRDLDRFLDLAQENGLYVILRPGPYICAEWDNGGLP 97 (319)
T ss_dssp GGHHHHHHHHHHTT-SEEEEE--HHHHSSBT------TB---SGGG-HHHHHHHHHHTT-EEEEEEES---TTBGGGG--
T ss_pred hHHHHHHHHHHhCCcceEEEeccccccCCCC------CcccccchhhHHHHHHHHHHcCcEEEecccceecccccchhhh
Confidence 4567789999999999999999999999985 889999987788999999999999776421 13 389
Q ss_pred ccccccCCCCChhhHHHHHHHHHHHHHHhC
Q 006252 265 AWAGEYGGWKLEKTIDYFMDFTRLVVDSVS 294 (654)
Q Consensus 265 ~wL~~~GGW~n~~~vd~Fa~YA~~vferfG 294 (654)
.||....+-.-+..-..|.++++.-++.+.
T Consensus 98 ~Wl~~~~~~~~R~~~~~~~~~~~~~~~~~~ 127 (319)
T PF01301_consen 98 AWLLRKPDIRLRTNDPPFLEAVERWYRALA 127 (319)
T ss_dssp GGGGGSTTS-SSSS-HHHHHHHHHHHHHHH
T ss_pred hhhhccccccccccchhHHHHHHHHHHHHH
Confidence 999765232222333344444444444433
No 32
>COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism]
Probab=95.29 E-value=0.13 Score=58.00 Aligned_cols=293 Identities=19% Similarity=0.181 Sum_probs=165.8
Q ss_pred cccccccccccCCCCcccccCCC--CcHHHHHHHHhcCCCeEEecc-cccccCCCCCCCCCccccChhH-HHHHHHHHHH
Q 006252 171 EVHHKVTAWHNVPHPEERLRFWS--DPDIELKLAKDTGVSVFRLGI-DWSRIMPAEPVNGLKETVNFAA-LERYKWIINR 246 (654)
Q Consensus 171 ~~~~~~~~~~n~~~pe~a~~~y~--~y~eDi~Lmk~lGv~~yRfSI-sWsRI~P~~~~~G~~g~vN~~G-l~~Yd~lId~ 246 (654)
.|.-+..+|+.-.+- ..-.+|. ..+.|++.++.+|++..|.+| +=-.. -+ ..|..|.+. +.+-..+++.
T Consensus 3 ~F~Lg~n~wprIani-kmw~~~~~~ei~~dle~a~~vg~k~lR~fiLDgEdc-~d-----~~G~~na~s~~~y~~~fla~ 75 (587)
T COG3934 3 VFALGLNRWPRIANI-KMWPAIGNREIKADLEPAGFVGVKDLRLFILDGEDC-RD-----KEGYRNAGSNVWYAAWFLAP 75 (587)
T ss_pred eEEeccccchhhhhh-hHHHHhhhhhhhcccccccCccceeEEEEEecCcch-hh-----hhceecccccHHHHHHHhhh
Confidence 355666666643221 1222233 334688999999999999984 21111 11 124566555 8889999999
Q ss_pred HHHcCCeEEEEec----cCCCcccccc-cCC------CCChhhHHHHHHHHHHHHHHhCCc--cceEEEccCcceeeecc
Q 006252 247 VRSYGMKVMLTLF----HHSLPAWAGE-YGG------WKLEKTIDYFMDFTRLVVDSVSDI--VDYWVTFNEPHVFCMLT 313 (654)
Q Consensus 247 L~~~GI~PiVTL~----HwDLP~wL~~-~GG------W~n~~~vd~Fa~YA~~vferfGDr--Vk~WiT~NEPnv~~~~G 313 (654)
+...+|+.++||. |+.-=.|.-. .|| ...+....-|.+|.+.+++.|+-. +--|+-=|||.+-+
T Consensus 76 a~~l~lkvlitlivg~~hmgg~Nw~Ipwag~~~pdn~iyD~k~~~~~kkyvedlVk~yk~~ptI~gw~l~Ne~lv~~--- 152 (587)
T COG3934 76 AGYLDLKVLITLIVGLKHMGGTNWRIPWAGEQSPDNVIYDPKFRGPGKKYVEDLVKPYKLDPTIAGWALRNEPLVEA--- 152 (587)
T ss_pred cccCcceEEEEEeecccccCcceeEeecCCCCCccccccchhhcccHHHHHHHHhhhhccChHHHHHHhcCCccccc---
Confidence 9999999999986 4433333211 111 224666778999999999988876 34588888865411
Q ss_pred ccCCCCCCCCCChhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCeEEEEeeccccCCCCcccHHHHHHHh
Q 006252 314 YCAGTWPGGNPDMLEVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSSTSTKSKVGVAHHVSFMRPYGLFDVTAVTLAN 393 (654)
Q Consensus 314 Y~~G~~pPg~~~~~~~~~~~~~~~~~~~a~hnLLlAHA~Ay~~ir~~~~~~q~g~IGi~~~~~~~~P~~~~D~~aa~~~n 393 (654)
|.. ..+++.=-...|..|+...++. .|.+ .++..|+.
T Consensus 153 -------p~s-------------------~N~f~~w~~emy~yiK~ldd~h---lvsv---GD~~sp~~----------- 189 (587)
T COG3934 153 -------PIS-------------------VNNFWDWSGEMYAYIKWLDDGH---LVSV---GDPASPWP----------- 189 (587)
T ss_pred -------cCC-------------------hhHHHHHHHHHHHHhhccCCCC---eeec---CCcCCccc-----------
Confidence 110 0123333355677788877653 2222 22222211
Q ss_pred cccCCccccccCCCcceeEeeccCcceeeCCCCcccCCCCcccCCcccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCC
Q 006252 394 TLTTFPYVDSISDRLDFIGINYYGQEVVSGPGLKLVETDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSD 473 (654)
Q Consensus 394 ~l~~~p~~d~I~~~~DFiGINyYt~~~V~~~~~~~~~~~~~s~~G~~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad 473 (654)
..-|+ .++...||-+.+.|. ++... .++..+ .+|=. ..|+ +-..-+ -.|+..-|.|+++
T Consensus 190 --~~~py--N~r~~vDya~~hLY~-hyd~s---------l~~r~s-~~yg~---~~l~-i~~~~g--~~pV~leefGfst 248 (587)
T COG3934 190 --QYAPY--NARFYVDYAANHLYR-HYDTS---------LVSRVS-TVYGK---PYLD-IPTIMG--WQPVNLEEFGFST 248 (587)
T ss_pred --ccCCc--ccceeeccccchhhh-hccCC---------hhheee-eeecc---hhhc-cchhcc--cceeeccccCCcc
Confidence 01112 245678898888885 22111 111111 01100 0111 111112 2799999999998
Q ss_pred CCccccHH--HHHHHHHHHHHHHHcCCCeeEEEEeecccccCCCCC-------CCCccceEEEcCCCCccccccchHHHH
Q 006252 474 ETDLIRRP--YVIEHLLAVYAAMITGVPVIGYLFWTISDNWEWADG-------YGPKFGLVAVDRANNLARIPRPSYHLF 544 (654)
Q Consensus 474 ~~D~~Ri~--YL~~hL~~v~kAi~dGV~V~GY~~WSLlDNfEW~~G-------Y~~RFGL~~VD~~~~l~R~PK~Sa~wY 544 (654)
..-..|.+ ++--- .|..-|. .|-++|.|.|--+=.++ .+..||++.-|- .+|-++..|
T Consensus 249 a~g~e~s~ayfiw~~-----lal~~gg--dGaLiwclsdf~~gsdd~ey~w~p~el~fgiIradg------pek~~a~~~ 315 (587)
T COG3934 249 AFGQENSPAYFIWIR-----LALDTGG--DGALIWCLSDFHLGSDDSEYTWGPMELEFGIIRADG------PEKIDAMTL 315 (587)
T ss_pred cccccccchhhhhhh-----hHHhhcC--CceEEEEecCCccCCCCCCCccccccceeeeecCCC------chhhhHHHH
Confidence 54333322 12111 1444444 58899999998643332 345799987664 678889888
Q ss_pred HHHHHc
Q 006252 545 TKVVTT 550 (654)
Q Consensus 545 ~~ii~~ 550 (654)
.++-.+
T Consensus 316 ~~fsn~ 321 (587)
T COG3934 316 HIFSNN 321 (587)
T ss_pred HHhccc
Confidence 888665
No 33
>PLN03059 beta-galactosidase; Provisional
Probab=94.69 E-value=0.23 Score=59.77 Aligned_cols=111 Identities=17% Similarity=0.235 Sum_probs=80.6
Q ss_pred CCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEec--------cCCCc
Q 006252 193 SDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF--------HHSLP 264 (654)
Q Consensus 193 ~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~--------HwDLP 264 (654)
+.|++=++.||++|+|++-.=|.|.-.+|.+ |++|.+|..=..++|+.+.+.||-.|+-.= .-.+|
T Consensus 59 ~~W~d~L~k~Ka~GlNtV~tYV~Wn~HEp~~------G~~dF~G~~DL~~Fl~la~e~GLyvilRpGPYIcAEw~~GGlP 132 (840)
T PLN03059 59 EMWPDLIQKAKDGGLDVIQTYVFWNGHEPSP------GNYYFEDRYDLVKFIKVVQAAGLYVHLRIGPYICAEWNFGGFP 132 (840)
T ss_pred HHHHHHHHHHHHcCCCeEEEEecccccCCCC------CeeeccchHHHHHHHHHHHHcCCEEEecCCcceeeeecCCCCc
Confidence 3466779999999999999999999999985 899999988889999999999999888531 34689
Q ss_pred ccccccCCCCChhhHHHHHHHHHHHHHHhCCcc---ceEEEccCccee
Q 006252 265 AWAGEYGGWKLEKTIDYFMDFTRLVVDSVSDIV---DYWVTFNEPHVF 309 (654)
Q Consensus 265 ~wL~~~GGW~n~~~vd~Fa~YA~~vferfGDrV---k~WiT~NEPnv~ 309 (654)
.||.+..|-.-|..-..|.+.++.-+++..+++ ++..+=-=|-++
T Consensus 133 ~WL~~~~~i~~Rs~d~~fl~~v~~~~~~l~~~l~~~~l~~~~GGPIIm 180 (840)
T PLN03059 133 VWLKYVPGIEFRTDNGPFKAAMQKFTEKIVDMMKSEKLFEPQGGPIIL 180 (840)
T ss_pred hhhhcCCCcccccCCHHHHHHHHHHHHHHHHHHhhcceeecCCCcEEE
Confidence 998754454333444555555555555555554 354444444443
No 34
>PLN02803 beta-amylase
Probab=94.67 E-value=0.082 Score=60.19 Aligned_cols=104 Identities=21% Similarity=0.378 Sum_probs=79.1
Q ss_pred cHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEec-c-----------CC
Q 006252 195 PDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF-H-----------HS 262 (654)
Q Consensus 195 y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~-H-----------wD 262 (654)
.+..++.+|.+||+.+-+.+=|--+++++| +++|+.| |++|++-+++.|++..+.|- | --
T Consensus 109 l~~~L~~LK~~GVdGVmvDVWWGiVE~~~p-----~~YdWsg---Y~~l~~mvr~~GLKlq~vmSFHqCGGNVGD~~~Ip 180 (548)
T PLN02803 109 MNASLMALRSAGVEGVMVDAWWGLVEKDGP-----MKYNWEG---YAELVQMVQKHGLKLQVVMSFHQCGGNVGDSCSIP 180 (548)
T ss_pred HHHHHHHHHHcCCCEEEEEeeeeeeccCCC-----CcCCcHH---HHHHHHHHHHcCCeEEEEEEecccCCCCCCccccc
Confidence 466899999999999999999999999863 7899765 99999999999999888774 4 25
Q ss_pred Ccccccc------------cCCCCChh----------------hHHHHHHHHHHHHHHhCCccceEEEccCcce
Q 006252 263 LPAWAGE------------YGGWKLEK----------------TIDYFMDFTRLVVDSVSDIVDYWVTFNEPHV 308 (654)
Q Consensus 263 LP~wL~~------------~GGW~n~~----------------~vd~Fa~YA~~vferfGDrVk~WiT~NEPnv 308 (654)
||+|+.+ .-|-.|.+ -++-+.+|-+-.-++|.+... -||.|..|
T Consensus 181 LP~WV~e~~~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~Dfm~SFr~~F~~~l~--~~I~eI~V 252 (548)
T PLN02803 181 LPPWVLEEMSKNPDLVYTDRSGRRNPEYISLGCDSLPVLRGRTPIQVYSDYMRSFRERFKDYLG--GVIAEIQV 252 (548)
T ss_pred CCHHHHHhhhcCCCceEecCCCCcccceeccccccchhccCCCHHHHHHHHHHHHHHHHHHHhc--CceEEEEe
Confidence 9999632 22323322 346678888877778877654 47777654
No 35
>PLN00197 beta-amylase; Provisional
Probab=94.34 E-value=0.12 Score=59.16 Aligned_cols=105 Identities=23% Similarity=0.398 Sum_probs=80.3
Q ss_pred CcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEec-c-----------C
Q 006252 194 DPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF-H-----------H 261 (654)
Q Consensus 194 ~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~-H-----------w 261 (654)
-.+..++.+|.+||+.+-+.+=|.-+++++| +++|+.| |++|++-+++.|++..+.|- | -
T Consensus 128 ~l~~~L~~LK~~GVdGVmvDvWWGiVE~~~p-----~~YdWsg---Y~~L~~mvr~~GLKlq~VmSFHqCGGNVGD~~~I 199 (573)
T PLN00197 128 AMKASLQALKSAGVEGIMMDVWWGLVERESP-----GVYNWGG---YNELLEMAKRHGLKVQAVMSFHQCGGNVGDSCTI 199 (573)
T ss_pred HHHHHHHHHHHcCCCEEEEeeeeeeeccCCC-----CcCCcHH---HHHHHHHHHHcCCeEEEEEEecccCCCCCCcccc
Confidence 3577899999999999999999999999864 7899766 99999999999999888774 4 2
Q ss_pred CCcccccc------------cCCCCChh----------------hHHHHHHHHHHHHHHhCCccceEEEccCcce
Q 006252 262 SLPAWAGE------------YGGWKLEK----------------TIDYFMDFTRLVVDSVSDIVDYWVTFNEPHV 308 (654)
Q Consensus 262 DLP~wL~~------------~GGW~n~~----------------~vd~Fa~YA~~vferfGDrVk~WiT~NEPnv 308 (654)
-||+|+.+ ..|-.|++ -++-+.+|-+-.-++|.+..+ -||.|..|
T Consensus 200 pLP~WV~~~g~~dpDifftDr~G~rn~EyLSlg~D~~pvl~GRTpiq~Y~DFM~SFr~~F~~~l~--~~I~eI~V 272 (573)
T PLN00197 200 PLPKWVVEEVDKDPDLAYTDQWGRRNYEYVSLGCDTLPVLKGRTPVQCYADFMRAFRDNFKHLLG--DTIVEIQV 272 (573)
T ss_pred cCCHHHHHhhccCCCceeecCCCCcccceeccccccccccCCCCHHHHHHHHHHHHHHHHHHHhc--CceeEEEe
Confidence 59999632 22322222 257788888887788877655 36777554
No 36
>PLN02161 beta-amylase
Probab=94.26 E-value=0.098 Score=59.31 Aligned_cols=110 Identities=19% Similarity=0.361 Sum_probs=82.9
Q ss_pred ccCCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEec-cC------
Q 006252 189 LRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF-HH------ 261 (654)
Q Consensus 189 ~~~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~-Hw------ 261 (654)
...+.-.+..++.+|.+||+.+-+.+=|--+++++| +++|+.| |++|++-+++.|++..+.|- |=
T Consensus 113 v~~~~al~~~L~~LK~~GVdGVmvDVWWGiVE~~~p-----~~YdWsg---Y~~l~~mvr~~GLKlq~vmSFHqCGGNvG 184 (531)
T PLN02161 113 IKRLKALTVSLKALKLAGVHGIAVEVWWGIVERFSP-----LEFKWSL---YEELFRLISEAGLKLHVALCFHSNMHLFG 184 (531)
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEEeeeeeeecCCC-----CcCCcHH---HHHHHHHHHHcCCeEEEEEEecccCCCCC
Confidence 345556678999999999999999999999999863 7899765 99999999999999888774 42
Q ss_pred -----CCcccccc------------cCCCCChh----------------hHHHHHHHHHHHHHHhCCccceEEEccCcce
Q 006252 262 -----SLPAWAGE------------YGGWKLEK----------------TIDYFMDFTRLVVDSVSDIVDYWVTFNEPHV 308 (654)
Q Consensus 262 -----DLP~wL~~------------~GGW~n~~----------------~vd~Fa~YA~~vferfGDrVk~WiT~NEPnv 308 (654)
-||+|+.+ .-|-.|++ -++-+.+|-+-.-++|.+... -||.|..|
T Consensus 185 d~~~IpLP~WV~~~g~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~Dfm~SFr~~F~~~~~--~~I~eI~V 262 (531)
T PLN02161 185 GKGGISLPLWIREIGDVNKDIYYRDKNGFSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLSFSTKFEPYIG--NVIEEISI 262 (531)
T ss_pred CccCccCCHHHHhhhccCCCceEEcCCCCcccceeeeecccchhcCCCCHHHHHHHHHHHHHHHHHHHhc--CceEEEEe
Confidence 49999632 23333322 346788888887788877654 36766554
No 37
>COG3664 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=94.02 E-value=0.44 Score=52.96 Aligned_cols=265 Identities=18% Similarity=0.206 Sum_probs=145.3
Q ss_pred HHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccc-cCCC-CC-hh
Q 006252 201 LAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGE-YGGW-KL-EK 277 (654)
Q Consensus 201 Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~-~GGW-~n-~~ 277 (654)
.-+|+|++..|.---|+-++-. --++ ..++++++|.+.+.|+.=+.+-+||+.++-... +.+= .. ..
T Consensus 13 ~~~Ei~v~yi~~~~v~h~~~q~-------~~~~---~t~~d~i~d~~~~~~~~~ie~~l~~~~l~~~~~~wq~n~~~~~~ 82 (428)
T COG3664 13 TDDEIQVNYIRRHGVWHVNAQK-------LFYP---FTYIDEIIDTLLDLGLDLIELFLIWNNLNTKEHQWQLNVDDPKS 82 (428)
T ss_pred hhhhhceeeehhcceeeeeecc-------ccCC---hHHHHHHHHHHHHhccHHHHHhhcccchhhhhhhcccccCCcHh
Confidence 3468899999988888833322 1233 478999999999999444446678887775543 2121 12 34
Q ss_pred hHHHHHHHHHHHHHHhCCc-c--ceEEEccCcceeeeccccCCCCCCCCCChhhhhhcCCCchhHHHHHHHHHHHHHHHH
Q 006252 278 TIDYFMDFTRLVVDSVSDI-V--DYWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATSALPTGVFNQAMHWMAIAHSKAY 354 (654)
Q Consensus 278 ~vd~Fa~YA~~vferfGDr-V--k~WiT~NEPnv~~~~GY~~G~~pPg~~~~~~~~~~~~~~~~~~~a~hnLLlAHA~Ay 354 (654)
..+.++.|..-|+.++|-+ | -....+||||..+ +. .+.+ + +.+..||
T Consensus 83 ~~dl~~~fl~h~~~~vg~e~v~kw~f~~~~~pn~~a--------------d~---------~eyf-k--~y~~~a~---- 132 (428)
T COG3664 83 VFDLIAAFLKHVIRRVGVEFVRKWPFYSPNEPNLLA--------------DK---------QEYF-K--LYDATAR---- 132 (428)
T ss_pred HHHHHHHHHHHHHHHhChhheeecceeecCCCCccc--------------ch---------HHHH-H--HHHhhhh----
Confidence 7889999999999999954 3 3345788888542 11 0112 1 2222222
Q ss_pred HHHHhhCCCCCCCeEEEEeeccccCCCCcccHHHHHHHhcccCCccccccCCCcceeEeeccCcceeeCCCCcccCCCCc
Q 006252 355 DYIHAKSSTSTKSKVGVAHHVSFMRPYGLFDVTAVTLANTLTTFPYVDSISDRLDFIGINYYGQEVVSGPGLKLVETDEY 434 (654)
Q Consensus 355 ~~ir~~~~~~q~g~IGi~~~~~~~~P~~~~D~~aa~~~n~l~~~p~~d~I~~~~DFiGINyYt~~~V~~~~~~~~~~~~~ 434 (654)
+..|..+ +| .+|..+ . ..++.+ .....||+-.+-|+..-|.... ......
T Consensus 133 ----~~~p~i~---vg----~~w~~e----~-----------l~~~~k-~~d~idfvt~~a~~~~av~~~~---~~~~~~ 182 (428)
T COG3664 133 ----QRAPSIQ---VG----GSWNTE----R-----------LHEFLK-KADEIDFVTELANSVDAVDFST---PGAEEV 182 (428)
T ss_pred ----ccCccee---ec----cccCcH----H-----------Hhhhhh-ccCcccceeecccccccccccC---CCchhh
Confidence 3444322 22 112111 0 011222 3567899998888765332110 000111
Q ss_pred ccCCc-ccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCCC------CccccHHHHHHHHHHHHHHHHcCCCeeEEEEee
Q 006252 435 SESGR-GVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDE------TDLIRRPYVIEHLLAVYAAMITGVPVIGYLFWT 507 (654)
Q Consensus 435 s~~G~-~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad~------~D~~Ri~YL~~hL~~v~kAi~dGV~V~GY~~WS 507 (654)
..++. .+.++ .+-++..-++++- ++|.++||=-..+. .+..|..||.+. .++.|.+|.+..+|.
T Consensus 183 ~l~~~~~~l~~--~r~~~d~i~~~~~-~~pl~~~~wntlt~~~~~~n~sy~raa~i~~~------Lr~~g~~v~a~~yW~ 253 (428)
T COG3664 183 KLSELKRTLED--LRGLKDLIQHHSL-GLPLLLTNWNTLTGPREPTNGSYVRAAYIMRL------LREAGSPVDAFGYWT 253 (428)
T ss_pred hhhhhhhhhhH--HHHHHHHHHhccC-CCcceeecccccCCCccccCceeehHHHHHHH------HHhcCChhhhhhhhh
Confidence 11111 12222 1222222234443 67999999766642 233455555443 234699999999999
Q ss_pred cccccCCC----CCCCCccceEEEcCCCCccccccchHHHHHHH
Q 006252 508 ISDNWEWA----DGYGPKFGLVAVDRANNLARIPRPSYHLFTKV 547 (654)
Q Consensus 508 LlDNfEW~----~GY~~RFGL~~VD~~~~l~R~PK~Sa~wY~~i 547 (654)
..|-+|=. .++-.-|||++ ++. .+|--=-++..|.++
T Consensus 254 ~sdl~e~~g~~~~~~~~gfel~~-~~~--~rrpa~~~~l~~n~L 294 (428)
T COG3664 254 NSDLHEEHGPPEAPFVGGFELFA-PYG--GRRPAWMAALFFNRL 294 (428)
T ss_pred cccccccCCCcccccccceeeec-ccc--cchhHHHHHHHHHHH
Confidence 99988643 23666788874 332 222222445666666
No 38
>PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D.
Probab=93.98 E-value=0.36 Score=51.39 Aligned_cols=107 Identities=18% Similarity=0.276 Sum_probs=63.1
Q ss_pred HHHHHHHHhcCCCeEEecc--ccccc-----CCCCCCCCCc------cccChhHHHHHHHHHHHHHHcCCeEEEEeccCC
Q 006252 196 DIELKLAKDTGVSVFRLGI--DWSRI-----MPAEPVNGLK------ETVNFAALERYKWIINRVRSYGMKVMLTLFHHS 262 (654)
Q Consensus 196 ~eDi~Lmk~lGv~~yRfSI--sWsRI-----~P~~~~~G~~------g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwD 262 (654)
++-++..|+-|+|.+|+.+ .|... .|..+..+.+ ..+|++=.++.+++|+.|.++||.|.+.+.| +
T Consensus 33 ~~yL~~r~~qgFN~iq~~~l~~~~~~~~~n~~~~~~~~~~~~~~~d~~~~N~~YF~~~d~~i~~a~~~Gi~~~lv~~w-g 111 (289)
T PF13204_consen 33 EQYLDTRKEQGFNVIQMNVLPQWDGYNTPNRYGFAPFPDEDPGQFDFTRPNPAYFDHLDRRIEKANELGIEAALVPFW-G 111 (289)
T ss_dssp HHHHHHHHHTT--EEEEES-SSSS-B----TTS-BS-SSTT------TT----HHHHHHHHHHHHHHTT-EEEEESS--H
T ss_pred HHHHHHHHHCCCCEEEEEeCCCcccccccccCCCcCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEEE-C
Confidence 3447889999999999998 44433 2222221111 2389999999999999999999999877766 1
Q ss_pred CcccccccCCCC---ChhhHHHHHHHHHHHHHHhCCc-cceEEEccCc
Q 006252 263 LPAWAGEYGGWK---LEKTIDYFMDFTRLVVDSVSDI-VDYWVTFNEP 306 (654)
Q Consensus 263 LP~wL~~~GGW~---n~~~vd~Fa~YA~~vferfGDr-Vk~WiT~NEP 306 (654)
.| ...|.|- +.-..+.-.+|.+.|++||++. =-.|+.=||-
T Consensus 112 ~~---~~~~~Wg~~~~~m~~e~~~~Y~~yv~~Ry~~~~NviW~l~gd~ 156 (289)
T PF13204_consen 112 CP---YVPGTWGFGPNIMPPENAERYGRYVVARYGAYPNVIWILGGDY 156 (289)
T ss_dssp HH---HH-------TTSS-HHHHHHHHHHHHHHHTT-SSEEEEEESSS
T ss_pred Cc---cccccccccccCCCHHHHHHHHHHHHHHHhcCCCCEEEecCcc
Confidence 11 1123342 2333667788999999999998 3668777764
No 39
>PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 14 GH14 from CAZY comprises enzymes with only one known activity; beta-amylase (3.2.1.2 from EC). A Glu residue has been proposed as a catalytic residue, but it is not known if it is the nucleophile or the proton donor. Beta-amylase [, ] is an enzyme that hydrolyses 1,4-alpha-glucosidic linkages in starch-type polysaccharide substrates so as to remove successive maltose units from the non-reducing ends of the chains. Beta-amylase is present in certain bacteria as well as in plants. Three highly conserved sequence regions are found in all known beta-amylases. The first of these regions is located in the N-terminal section of the enzymes and contains an aspartate which is known [] to be involved in the catalytic mechanism. The second, located in a more central location, is centred around a glutamate which is also involved [] in the catalytic mechanism. The 3D structure of a complex of soybean beta-amylase with an inhibitor (alpha-cyclodextrin) has been determined to 3.0A resolution by X-ray diffraction []. The enzyme folds into large and small domains: the large domain has a (beta alpha)8 super-secondary structural core, while the smaller is formed from two long loops extending from the beta-3 and beta-4 strands of the (beta alpha)8 fold []. The interface of the two domains, together with shorter loops from the (beta alpha)8 core, form a deep cleft, in which the inhibitor binds []. Two maltose molecules also bind in the cleft, one sharing a binding site with alpha-cyclodextrin, and the other sitting more deeply in the cleft [].; GO: 0016161 beta-amylase activity, 0000272 polysaccharide catabolic process; PDB: 1FA2_A 2DQX_A 1WDP_A 1UKP_C 1BYC_A 1BYA_A 1Q6C_A 1V3I_A 1BTC_A 1BYB_A ....
Probab=93.92 E-value=0.046 Score=60.58 Aligned_cols=103 Identities=25% Similarity=0.481 Sum_probs=77.4
Q ss_pred CcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEe-cc-----------C
Q 006252 194 DPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTL-FH-----------H 261 (654)
Q Consensus 194 ~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL-~H-----------w 261 (654)
-.+..++.+|++||+.+-..+=|.-+++.+| +++|+++ |++|++-+++.|++..+.| +| .
T Consensus 17 ~~~~~L~~LK~~GV~GVmvdvWWGiVE~~~p-----~~ydWs~---Y~~l~~~vr~~GLk~~~vmsfH~cGgNvgD~~~I 88 (402)
T PF01373_consen 17 ALEAQLRALKSAGVDGVMVDVWWGIVEGEGP-----QQYDWSG---YRELFEMVRDAGLKLQVVMSFHQCGGNVGDDCNI 88 (402)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEEHHHHTGSST-----TB---HH---HHHHHHHHHHTT-EEEEEEE-S-BSSSTTSSSEB
T ss_pred HHHHHHHHHHHcCCcEEEEEeEeeeeccCCC-----CccCcHH---HHHHHHHHHHcCCeEEEEEeeecCCCCCCCccCC
Confidence 5678999999999999999999999999863 7899755 9999999999999998877 34 4
Q ss_pred CCccccc-----------c-cC--------CCCChhhHHHHHHHHHHHHHHhCCccceEEEccCcc
Q 006252 262 SLPAWAG-----------E-YG--------GWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPH 307 (654)
Q Consensus 262 DLP~wL~-----------~-~G--------GW~n~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPn 307 (654)
-||.|+. + .| -|....+++.+.+|-+-..++|.+.. -||-|..
T Consensus 89 pLP~Wv~~~~~~~di~ytd~~G~rn~E~lSp~~~grt~~~Y~dfm~sF~~~f~~~~---~~I~~I~ 151 (402)
T PF01373_consen 89 PLPSWVWEIGKKDDIFYTDRSGNRNKEYLSPVLDGRTLQCYSDFMRSFRDNFSDYL---STITEIQ 151 (402)
T ss_dssp -S-HHHHHHHHHSGGEEE-TTS-EEEEEE-CTBTTBCHHHHHHHHHHHHHHCHHHH---TGEEEEE
T ss_pred cCCHHHHhccccCCcEEECCCCCcCcceeecccCCchHHHHHHHHHHHHHHHHHHH---hhheEEE
Confidence 6899973 1 23 25555569999999999999998865 4555544
No 40
>PLN02705 beta-amylase
Probab=92.28 E-value=0.41 Score=55.45 Aligned_cols=106 Identities=21% Similarity=0.335 Sum_probs=76.8
Q ss_pred CCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEec-c-----------
Q 006252 193 SDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF-H----------- 260 (654)
Q Consensus 193 ~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~-H----------- 260 (654)
.-.+..++.+|.+||+.+-+.+=|-.++.++| +.+|+.| |++|++-+++.|++..+.|- |
T Consensus 268 ~al~a~L~aLK~aGVdGVmvDVWWGiVE~~~P-----~~YdWsg---Y~~L~~mvr~~GLKlqvVmSFHqCGGNVGD~~~ 339 (681)
T PLN02705 268 EGVRQELSHMKSLNVDGVVVDCWWGIVEGWNP-----QKYVWSG---YRELFNIIREFKLKLQVVMAFHEYGGNASGNVM 339 (681)
T ss_pred HHHHHHHHHHHHcCCCEEEEeeeeeEeecCCC-----CcCCcHH---HHHHHHHHHHcCCeEEEEEEeeccCCCCCCccc
Confidence 33577899999999999999999999999763 7899765 99999999999999887764 4
Q ss_pred CCCcccccc------------cCCCCCh----------------hhHHHHHHHHHHHHHHhCCccceEEEccCcc
Q 006252 261 HSLPAWAGE------------YGGWKLE----------------KTIDYFMDFTRLVVDSVSDIVDYWVTFNEPH 307 (654)
Q Consensus 261 wDLP~wL~~------------~GGW~n~----------------~~vd~Fa~YA~~vferfGDrVk~WiT~NEPn 307 (654)
--||+|+.+ .-|-.|. .-++-+.+|.+-.-++|.+...- -||.|..
T Consensus 340 IPLP~WV~e~g~~nPDifftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~DFM~SFr~~F~~fl~~-g~I~eI~ 413 (681)
T PLN02705 340 ISLPQWVLEIGKDNQDIFFTDREGRRNTECLSWSIDKERVLKGRTGIEVYFDFMRSFRSEFDDLFVE-GLITAVE 413 (681)
T ss_pred ccCCHHHHHhcccCCCceeecCCCCcccceeeeecCcccccCCCCHHHHHHHHHHHHHHHHHHhccC-CceeEEE
Confidence 259999642 2232222 23367777777777777664311 2555544
No 41
>PLN02905 beta-amylase
Probab=92.01 E-value=0.24 Score=57.37 Aligned_cols=110 Identities=18% Similarity=0.331 Sum_probs=79.9
Q ss_pred ccCCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEec-c-------
Q 006252 189 LRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF-H------- 260 (654)
Q Consensus 189 ~~~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~-H------- 260 (654)
...+.-.+..++.+|.+||+.+-+.+=|--+++++| +++|+.| |++|++-+++.|++..+.|- |
T Consensus 282 l~~~~al~a~L~aLK~aGVdGVmvDVWWGiVE~~gP-----~~YdWsg---Y~~L~~mvr~~GLKlqvVMSFHqCGGNVG 353 (702)
T PLN02905 282 LADPDGLLKQLRILKSINVDGVKVDCWWGIVEAHAP-----QEYNWNG---YKRLFQMVRELKLKLQVVMSFHECGGNVG 353 (702)
T ss_pred ccCHHHHHHHHHHHHHcCCCEEEEeeeeeeeecCCC-----CcCCcHH---HHHHHHHHHHcCCeEEEEEEecccCCCCC
Confidence 455566778899999999999999999999999864 7899765 99999999999999888774 4
Q ss_pred ----CCCcccccc------------cCCCCCh----------------hhHHHHHHHHHHHHHHhCCccceEEEccCcc
Q 006252 261 ----HSLPAWAGE------------YGGWKLE----------------KTIDYFMDFTRLVVDSVSDIVDYWVTFNEPH 307 (654)
Q Consensus 261 ----wDLP~wL~~------------~GGW~n~----------------~~vd~Fa~YA~~vferfGDrVk~WiT~NEPn 307 (654)
--||+|+.+ .-|-.|+ .-++-+.+|-+-.-++|.+...- -||.|..
T Consensus 354 D~~~IPLP~WV~e~g~~nPDifftDrsG~rn~EyLSlg~D~~pvl~GRTplq~Y~DFM~SFr~~F~~fl~~-g~I~eI~ 431 (702)
T PLN02905 354 DDVCIPLPHWVAEIGRSNPDIFFTDREGRRNPECLSWGIDKERILRGRTALEVYFDYMRSFRVEFDEFFED-GVISMVE 431 (702)
T ss_pred CcccccCCHHHHHhhhcCCCceEecCCCCccCceeeeecccccccCCCCHHHHHHHHHHHHHHHHHHHhcC-CceEEEE
Confidence 259999632 2233332 23466777777777777664311 2555544
No 42
>PLN02801 beta-amylase
Probab=91.86 E-value=0.33 Score=55.18 Aligned_cols=104 Identities=18% Similarity=0.449 Sum_probs=78.0
Q ss_pred cHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEec-c-----------CC
Q 006252 195 PDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF-H-----------HS 262 (654)
Q Consensus 195 y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~-H-----------wD 262 (654)
.+..++.+|.+||+.+-..+=|.-++.++| +++|++| |++|++-+++.|++..+.|- | .-
T Consensus 39 l~~~L~~LK~~GVdGVmvDVWWGiVE~~~P-----~~YdWsg---Y~~l~~mvr~~GLKlq~vmSFHqCGGNVGD~~~Ip 110 (517)
T PLN02801 39 LEKQLKRLKEAGVDGVMVDVWWGIVESKGP-----KQYDWSA---YRSLFELVQSFGLKIQAIMSFHQCGGNVGDAVNIP 110 (517)
T ss_pred HHHHHHHHHHcCCCEEEEeeeeeeeccCCC-----CccCcHH---HHHHHHHHHHcCCeEEEEEEecccCCCCCCccccc
Confidence 567899999999999999999999999763 7899765 99999999999999877764 3 35
Q ss_pred Ccccccc------------cCCCCC----------------hhhHHHHHHHHHHHHHHhCCccceEEEccCcc
Q 006252 263 LPAWAGE------------YGGWKL----------------EKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPH 307 (654)
Q Consensus 263 LP~wL~~------------~GGW~n----------------~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPn 307 (654)
||+|+.+ .-|-.| +.-++.+.+|-+-.-++|.|...- -||.|..
T Consensus 111 LP~WV~~~g~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~Dfm~SFr~~F~~~l~~-~~I~eI~ 182 (517)
T PLN02801 111 IPQWVRDVGDSDPDIFYTNRSGNRNKEYLSIGVDNLPLFHGRTAVEMYSDYMKSFRENMADFLEA-GVIIDIE 182 (517)
T ss_pred CCHHHHHhhccCCCceeecCCCCcCcceeeeccCcccccCCCCHHHHHHHHHHHHHHHHHHhccC-CeeEEEE
Confidence 9999632 223222 223588888888888888775421 2555544
No 43
>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 17 GH17 from CAZY comprises enzymes with several known activities; endo-1,3-beta-glucosidase (3.2.1.39 from EC); lichenase (3.2.1.73 from EC); exo-1,3-glucanase (3.2.1.58 from EC). Currently these enzymes have only been found in plants and in fungi. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1AQ0_B 1GHR_A 1GHS_B 2CYG_A 3UR8_A 3UR7_B 3EM5_C 3F55_D.
Probab=91.11 E-value=0.32 Score=52.47 Aligned_cols=88 Identities=18% Similarity=0.305 Sum_probs=42.2
Q ss_pred HHHHHHHHHHhCCCCCCEEEeecCCCCCCccc-cHHHHHHHHHHHHHHHHcCCCe-----eEEEEeecccccCCCCC--C
Q 006252 447 FRVLHQFHERYKHLNLPFIITENGVSDETDLI-RRPYVIEHLLAVYAAMITGVPV-----IGYLFWTISDNWEWADG--Y 518 (654)
Q Consensus 447 ~~~L~~i~~rY~~~~~PI~ITENG~ad~~D~~-Ri~YL~~hL~~v~kAi~dGV~V-----~GY~~WSLlDNfEW~~G--Y 518 (654)
.+.+....++.+..++||+|||+||++..+.. -..=-+.+...+.+.+.+|.+- .-+++.+++|- .|..| .
T Consensus 213 ~da~~~a~~~~g~~~~~vvv~ETGWPs~G~~~a~~~nA~~~~~nl~~~~~~gt~~~~~~~~~~y~F~~FdE-~~K~~~~~ 291 (310)
T PF00332_consen 213 VDAVYAAMEKLGFPNVPVVVGETGWPSAGDPGATPENAQAYNQNLIKHVLKGTPLRPGNGIDVYIFEAFDE-NWKPGPEV 291 (310)
T ss_dssp HHHHHHHHHTTT-TT--EEEEEE---SSSSTTCSHHHHHHHHHHHHHHCCGBBSSSBSS---EEES-SB---TTSSSSGG
T ss_pred HHHHHHHHHHhCCCCceeEEeccccccCCCCCCCcchhHHHHHHHHHHHhCCCcccCCCCCeEEEEEEecC-cCCCCCcc
Confidence 34444445555544789999999999866511 1111233444444444455553 34777888875 46555 5
Q ss_pred CCccceEEEcCCCCccccccchH
Q 006252 519 GPKFGLVAVDRANNLARIPRPSY 541 (654)
Q Consensus 519 ~~RFGL~~VD~~~~l~R~PK~Sa 541 (654)
+..|||++-| |+||-+.
T Consensus 292 E~~wGlf~~d------~~~ky~~ 308 (310)
T PF00332_consen 292 ERHWGLFYPD------GTPKYDL 308 (310)
T ss_dssp GGG--SB-TT------SSBSS--
T ss_pred cceeeeECCC------CCeecCC
Confidence 8899999877 4676543
No 44
>COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]
Probab=89.16 E-value=1.6 Score=52.81 Aligned_cols=125 Identities=17% Similarity=0.108 Sum_probs=85.3
Q ss_pred hhhhhhhhcccccccCCCCCcCCccccccccccccccCCCCccccc-CCCCcHHHHHHHHhcCCCeEEecccccccCCCC
Q 006252 145 RGFQKYIEVDEGEEVSGENEVPTENEEVHHKVTAWHNVPHPEERLR-FWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAE 223 (654)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~pe~a~~-~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~ 223 (654)
=||..+.=..++=.|||. | .|+|-+++-+.. |..... ....+..|+++||++|+|++|.| -.|..
T Consensus 281 iGfR~iei~~~~~~iNGk---p----vf~kGvnrHe~~--~~~G~~~~~~~~~~dl~lmk~~n~N~vRts-----HyP~~ 346 (808)
T COG3250 281 IGFRTVEIKDGLLLINGK---P----VFIRGVNRHEDD--PILGRVTDEDAMERDLKLMKEANMNSVRTS-----HYPNS 346 (808)
T ss_pred eccEEEEEECCeEEECCe---E----EEEeeeecccCC--CccccccCHHHHHHHHHHHHHcCCCEEEec-----CCCCC
Confidence 377777766778888884 4 899988775543 333333 34449999999999999999999 66753
Q ss_pred CCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccccCCCCChhhHHHHHHHHHHHHHHhCCc--cceEE
Q 006252 224 PVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKLEKTIDYFMDFTRLVVDSVSDI--VDYWV 301 (654)
Q Consensus 224 ~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~~GGW~n~~~vd~Fa~YA~~vferfGDr--Vk~Wi 301 (654)
.+..+-|=+.||-+|=-..+.. .|+..+++..+...+=++.+++|-... |-.|+
T Consensus 347 -----------------~~~ydLcDelGllV~~Ea~~~~-------~~~~~~~~~~k~~~~~i~~mver~knHPSIiiWs 402 (808)
T COG3250 347 -----------------EEFYDLCDELGLLVIDEAMIET-------HGMPDDPEWRKEVSEEVRRMVERDRNHPSIIIWS 402 (808)
T ss_pred -----------------HHHHHHHHHhCcEEEEecchhh-------cCCCCCcchhHHHHHHHHHHHHhccCCCcEEEEe
Confidence 1345556677888876554321 133355566666677778888887765 67777
Q ss_pred EccCcc
Q 006252 302 TFNEPH 307 (654)
Q Consensus 302 T~NEPn 307 (654)
.=||..
T Consensus 403 ~gNE~~ 408 (808)
T COG3250 403 LGNESG 408 (808)
T ss_pred cccccc
Confidence 777754
No 45
>PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 30 GH30 from CAZY comprises enzymes with only one known activity; glucosylceramidase (3.2.1.45 from EC). Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides []. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [, ].; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0007040 lysosome organization, 0005764 lysosome; PDB: 2VT0_B 1NOF_A 2Y24_A 2WCG_B 2J25_A 3GXM_D 1Y7V_B 2NT0_C 3GXF_C 3GXD_A ....
Probab=86.75 E-value=39 Score=39.07 Aligned_cols=112 Identities=18% Similarity=0.279 Sum_probs=62.5
Q ss_pred CCcceeEeeccCcceeeCCCCcccCCCCcccCCcccCcHHHHHHHHHHHHHhCCCCCCEEEeecCCCCC-Cc----cccH
Q 006252 406 DRLDFIGINYYGQEVVSGPGLKLVETDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDE-TD----LIRR 480 (654)
Q Consensus 406 ~~~DFiGINyYt~~~V~~~~~~~~~~~~~s~~G~~i~P~GL~~~L~~i~~rY~~~~~PI~ITENG~ad~-~D----~~Ri 480 (654)
...|-+|+|.|... .. ...|.+++++|+ ++.|+-||...+.- .| ....
T Consensus 301 ~yv~GiA~HwY~g~---------------------~~----~~~l~~~h~~~P--~k~l~~TE~~~g~~~~~~~~~~g~w 353 (496)
T PF02055_consen 301 KYVDGIAFHWYGGD---------------------PS----PQALDQVHNKFP--DKFLLFTEACCGSWNWDTSVDLGSW 353 (496)
T ss_dssp TTEEEEEEEETTCS----------------------H----CHHHHHHHHHST--TSEEEEEEEESS-STTS-SS-TTHH
T ss_pred hheeEEEEECCCCC---------------------ch----hhHHHHHHHHCC--CcEEEeeccccCCCCcccccccccH
Confidence 45799999999631 01 135677899998 68899999866542 12 1111
Q ss_pred HHHHHHHHHHHHHHHcCCCeeEEEEeecc-cc---cCCCCCCCCccceEEEcCCCCccccccchHHHHHHHHH
Q 006252 481 PYVIEHLLAVYAAMITGVPVIGYLFWTIS-DN---WEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVT 549 (654)
Q Consensus 481 ~YL~~hL~~v~kAi~dGV~V~GY~~WSLl-DN---fEW~~GY~~RFGL~~VD~~~~l~R~PK~Sa~wY~~ii~ 549 (654)
.--..+...+...+..| +.||+.|.|+ |. --|..++... .+-||.++ .+-+..|.++.++++.+
T Consensus 354 ~~~~~y~~~ii~~lnn~--~~gw~~WNl~LD~~GGP~~~~n~~d~--~iivd~~~-~~~~~~p~yY~~gHfSK 421 (496)
T PF02055_consen 354 DRAERYAHDIIGDLNNW--VSGWIDWNLALDENGGPNWVGNFCDA--PIIVDSDT-GEFYKQPEYYAMGHFSK 421 (496)
T ss_dssp HHHHHHHHHHHHHHHTT--EEEEEEEESEBETTS---TT---B----SEEEEGGG-TEEEE-HHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhh--ceeeeeeeeecCCCCCCcccCCCCCc--eeEEEcCC-CeEEEcHHHHHHHHHhc
Confidence 11233444455666677 5899999985 31 2243333332 34467543 23455667777666644
No 46
>PF12891 Glyco_hydro_44: Glycoside hydrolase family 44; InterPro: IPR024745 This is a family of putative bacterial glycoside hydrolases.; PDB: 3IK2_A 3ZQ9_A 2YJQ_B 2YKK_A 2YIH_A 2EEX_A 2EQD_A 2E0P_A 2E4T_A 2EO7_A ....
Probab=83.99 E-value=1.8 Score=45.19 Aligned_cols=71 Identities=21% Similarity=0.315 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHcCCeEEEEecc--------------CCCcccc--c---------------cc-CCC---CChh---hH
Q 006252 238 ERYKWIINRVRSYGMKVMLTLFH--------------HSLPAWA--G---------------EY-GGW---KLEK---TI 279 (654)
Q Consensus 238 ~~Yd~lId~L~~~GI~PiVTL~H--------------wDLP~wL--~---------------~~-GGW---~n~~---~v 279 (654)
+.++.+|+.-+++|.++|+||-= ...|.+= . .. |+- .+|+ ..
T Consensus 24 ~~~~~f~~~~~~~ga~~m~T~pm~G~Vakd~~~~~~~~~fp~~~y~~Q~~~d~~~~~~Gng~~~~~~~~~~~~P~~~~~~ 103 (239)
T PF12891_consen 24 DVADTFIDQNLAAGAYSMMTLPMIGYVAKDANSVSESESFPSWRYGPQQWFDPWNPDCGNGVKPDKTALTSNDPDTPDNP 103 (239)
T ss_dssp HHHHHHHHHHHHTT-EEEEEE--SSEEES-BSEGBGGGTSSSTTEEEBS-EETTEEEEE-SEESTSSS--SSSGGSSSSE
T ss_pred HHHHHHHHHhhhcCcceeEeecccceEecCCCCcccccCCChhhcccccccCcCcCCCCccccCCCCCCCCCCCCCCccH
Confidence 56889999999999999999841 1112110 1 00 111 1343 11
Q ss_pred HHHHHHHHHHHHHhCCc-----cceEEEccCcce
Q 006252 280 DYFMDFTRLVVDSVSDI-----VDYWVTFNEPHV 308 (654)
Q Consensus 280 d~Fa~YA~~vferfGDr-----Vk~WiT~NEPnv 308 (654)
.+-.+++..+..+||.. |++|..=|||.+
T Consensus 104 ~y~~ewV~~l~~~~g~a~~~~gvk~y~lDNEP~L 137 (239)
T PF12891_consen 104 VYMDEWVNYLVNKYGNASTNGGVKYYSLDNEPDL 137 (239)
T ss_dssp EEHHHHHHHHHHHH--TTSTTS--EEEESS-GGG
T ss_pred hHHHHHHHHHHHHHhccccCCCceEEEecCchHh
Confidence 23445577777787776 999999999985
No 47
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=79.78 E-value=17 Score=35.84 Aligned_cols=103 Identities=16% Similarity=0.248 Sum_probs=60.1
Q ss_pred CCcHHHHHHHHhcCCCeEEeccccccc-----CCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccc
Q 006252 193 SDPDIELKLAKDTGVSVFRLGIDWSRI-----MPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWA 267 (654)
Q Consensus 193 ~~y~eDi~Lmk~lGv~~yRfSIsWsRI-----~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL 267 (654)
.+|+++++.||++|++.+=+ .|+.. .|.. ...+.+.....+-...+++..-++||+.+|.|+.. |.|.
T Consensus 20 ~~W~~~~~~m~~~GidtlIl--q~~~~~~~~~yps~---~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~Gl~~~--~~~w 92 (166)
T PF14488_consen 20 AQWREEFRAMKAIGIDTLIL--QWTGYGGFAFYPSK---LSPGGFYMPPVDLLEMILDAADKYGMKVFVGLYFD--PDYW 92 (166)
T ss_pred HHHHHHHHHHHHcCCcEEEE--EEeecCCcccCCcc---ccCccccCCcccHHHHHHHHHHHcCCEEEEeCCCC--chhh
Confidence 35789999999999999843 24443 2221 00112233345667889999999999999999853 4444
Q ss_pred cccCCCCChh-hHHHHHHHHHHHHHHhCCc--cceEEEccCc
Q 006252 268 GEYGGWKLEK-TIDYFMDFTRLVVDSVSDI--VDYWVTFNEP 306 (654)
Q Consensus 268 ~~~GGW~n~~-~vd~Fa~YA~~vferfGDr--Vk~WiT~NEP 306 (654)
+. .+.+ -++.=..-++.+.++||.. +.-|-.=+|+
T Consensus 93 ~~----~~~~~~~~~~~~v~~el~~~yg~h~sf~GWYip~E~ 130 (166)
T PF14488_consen 93 DQ----GDLDWEAERNKQVADELWQRYGHHPSFYGWYIPYEI 130 (166)
T ss_pred hc----cCHHHHHHHHHHHHHHHHHHHcCCCCCceEEEeccc
Confidence 42 1111 1222223455566677664 3334444444
No 48
>PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This entry represents a family of putative cellulase enzymes.; PDB: 3GYC_B.
Probab=78.20 E-value=3.7 Score=35.83 Aligned_cols=18 Identities=28% Similarity=0.468 Sum_probs=13.0
Q ss_pred HHHhCC--ccceEEEccC-cc
Q 006252 290 VDSVSD--IVDYWVTFNE-PH 307 (654)
Q Consensus 290 ferfGD--rVk~WiT~NE-Pn 307 (654)
+++||+ +|.+|-.+|| |+
T Consensus 2 v~~~~~~~~Il~Wdl~NE~p~ 22 (88)
T PF12876_consen 2 VTRFGYDPRILAWDLWNEPPN 22 (88)
T ss_dssp HHHTT-GGGEEEEESSTTTT-
T ss_pred chhhcCCCCEEEEEeecCCCC
Confidence 456654 5999999999 76
No 49
>KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism]
Probab=75.57 E-value=1.1 Score=51.30 Aligned_cols=112 Identities=18% Similarity=0.212 Sum_probs=72.5
Q ss_pred CCeeEEEEeecccccCCCCC-CCCccceEEEcCCCCccccccchHHHHHHHHHcCCCCCchhh-hhhH---HHHHHHHhc
Q 006252 498 VPVIGYLFWTISDNWEWADG-YGPKFGLVAVDRANNLARIPRPSYHLFTKVVTTGKVTREDRA-RAWS---ELQLAAKQK 572 (654)
Q Consensus 498 V~V~GY~~WSLlDNfEW~~G-Y~~RFGL~~VD~~~~l~R~PK~Sa~wY~~ii~~~~i~~~~~~-~~~~---~~~~~a~~~ 572 (654)
..-.=+.-|.|-+.++|... |.....+|..|.-.+..+.-+.... ...+..|. -.+. .+++|.++
T Consensus 384 ~~~~~v~P~Glr~~L~yiK~~Y~np~iyItENG~~d~~~~~~~~~~---------~l~D~~Ri~Y~~~~L~~~~kAi~~- 453 (524)
T KOG0626|consen 384 SDWLPVYPWGLRKLLNYIKDKYGNPPIYITENGFDDLDGGTKSLEV---------ALKDTKRIEYLQNHLQAVLKAIKE- 453 (524)
T ss_pred ccceeeccHHHHHHHHHHHhhcCCCcEEEEeCCCCcccccccchhh---------hhcchHHHHHHHHHHHHHHHHHHh-
Confidence 33444568999999999877 8888888888854332222111111 11111121 1222 34455443
Q ss_pred ccCCcccccccccccccCCCCCCCCCCCCCCCccceeeeecCCCCccchhhhhhhc
Q 006252 573 KTRPFYRAVNKHGLMYAGGLDEPTQRPYIQRDWRFGHYQMEGLQDPLSRLSRCILR 628 (654)
Q Consensus 573 k~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~~~~~ 628 (654)
.+||=.|-++.-.+|-..+.+.. ++|||.|.|+ ++||+.|..+.-..
T Consensus 454 ------dgvnv~GYf~WSLmDnfEw~~Gy--~~RFGlyyVD-f~d~l~R~pK~Sa~ 500 (524)
T KOG0626|consen 454 ------DGVNVKGYFVWSLLDNFEWLDGY--KVRFGLYYVD-FKDPLKRYPKLSAK 500 (524)
T ss_pred ------cCCceeeEEEeEcccchhhhcCc--ccccccEEEe-CCCCCcCCchhHHH
Confidence 45788888888899988887744 5999999999 99999887776544
No 50
>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism]
Probab=73.29 E-value=9.6 Score=40.69 Aligned_cols=58 Identities=14% Similarity=0.154 Sum_probs=43.8
Q ss_pred cCCCCcccccCCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEec
Q 006252 181 NVPHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF 259 (654)
Q Consensus 181 n~~~pe~a~~~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~ 259 (654)
+.++.+-+|..-++|..|+++++.-+. .+|.= | .|...+ .++.-.+-+.|++.++.++
T Consensus 51 ~~~n~dGtCKSa~~~~sDLe~l~~~t~-~IR~Y----------------~-sDCn~l---e~v~pAa~~~g~kv~lGiw 108 (305)
T COG5309 51 GPYNDDGTCKSADQVASDLELLASYTH-SIRTY----------------G-SDCNTL---ENVLPAAEASGFKVFLGIW 108 (305)
T ss_pred cccCCCCCCcCHHHHHhHHHHhccCCc-eEEEe----------------e-ccchhh---hhhHHHHHhcCceEEEEEe
Confidence 566688899999999999999998886 55531 1 233333 3688888899999998884
No 51
>KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism]
Probab=68.24 E-value=12 Score=44.29 Aligned_cols=93 Identities=20% Similarity=0.222 Sum_probs=71.5
Q ss_pred CcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEe--------ccCCCcc
Q 006252 194 DPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTL--------FHHSLPA 265 (654)
Q Consensus 194 ~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL--------~HwDLP~ 265 (654)
.|++=|+.+|++|+|++-.=+-|.-.+|.+ |+.|.+|.-=.-.+|..+.++|+-.++-+ .|=.+|.
T Consensus 50 ~W~~~i~k~k~~Gln~IqtYVfWn~Hep~~------g~y~FsG~~DlvkFikl~~~~GLyv~LRiGPyIcaEw~~GG~P~ 123 (649)
T KOG0496|consen 50 MWPDLIKKAKAGGLNVIQTYVFWNLHEPSP------GKYDFSGRYDLVKFIKLIHKAGLYVILRIGPYICAEWNFGGLPW 123 (649)
T ss_pred hhHHHHHHHHhcCCceeeeeeecccccCCC------CcccccchhHHHHHHHHHHHCCeEEEecCCCeEEecccCCCcch
Confidence 456679999999999999999999999985 77899886666677899999998766643 2456888
Q ss_pred cccccCCC----CChhhHHHHHHHHHHHHHH
Q 006252 266 WAGEYGGW----KLEKTIDYFMDFTRLVVDS 292 (654)
Q Consensus 266 wL~~~GGW----~n~~~vd~Fa~YA~~vfer 292 (654)
||...-|- .|+..-.++.+|.+.++..
T Consensus 124 wL~~~pg~~~Rt~nepfk~~~~~~~~~iv~~ 154 (649)
T KOG0496|consen 124 WLRNVPGIVFRTDNEPFKAEMERWTTKIVPM 154 (649)
T ss_pred hhhhCCceEEecCChHHHHHHHHHHHHHHHH
Confidence 88654332 2566777777888777763
No 52
>smart00642 Aamy Alpha-amylase domain.
Probab=56.89 E-value=36 Score=33.34 Aligned_cols=68 Identities=19% Similarity=0.262 Sum_probs=45.3
Q ss_pred cCCCCcHHHHHHHHhcCCCeEEecccccccCC--CCCCCCC----ccccCh--hHHHHHHHHHHHHHHcCCeEEEEec
Q 006252 190 RFWSDPDIELKLAKDTGVSVFRLGIDWSRIMP--AEPVNGL----KETVNF--AALERYKWIINRVRSYGMKVMLTLF 259 (654)
Q Consensus 190 ~~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P--~~~~~G~----~g~vN~--~Gl~~Yd~lId~L~~~GI~PiVTL~ 259 (654)
+-|....+-+.-+++||++++-++--+..... .. .|- --.+|+ -..+=+++||++++++||++|+.+.
T Consensus 16 G~~~gi~~~l~yl~~lG~~~I~l~Pi~~~~~~~~~~--~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 16 GDLQGIIEKLDYLKDLGVTAIWLSPIFESPQGYPSY--HGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECcceeCCCCCCCC--CCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 44666777788999999999998776544431 00 000 001221 1245578999999999999999873
No 53
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=51.41 E-value=59 Score=39.65 Aligned_cols=100 Identities=18% Similarity=0.270 Sum_probs=62.3
Q ss_pred cCCCeEEeccc-ccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccC---CCccc--c-------cc--
Q 006252 205 TGVSVFRLGID-WSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHH---SLPAW--A-------GE-- 269 (654)
Q Consensus 205 lGv~~yRfSIs-WsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~Hw---DLP~w--L-------~~-- 269 (654)
+=++++++++. |.+ ..+ .=++|+.-.-.=+.||++|++.||+-++.+... |.|+- + .+
T Consensus 294 IP~d~~~lD~~~~~~--~~~-----~F~wd~~~FP~pk~mi~~l~~~Gikl~~~i~P~i~~d~~~~~e~~~~Gy~~k~~~ 366 (772)
T COG1501 294 IPLDVFVLDIDFWMD--NWG-----DFTWDPDRFPDPKQMIAELHEKGIKLIVIINPYIKQDSPLFKEAIEKGYFVKDPD 366 (772)
T ss_pred CcceEEEEeehhhhc--ccc-----ceEECcccCCCHHHHHHHHHhcCceEEEEeccccccCCchHHHHHHCCeEEECCC
Confidence 45788999995 875 111 123333222223489999999999999988642 33321 0 00
Q ss_pred -----------cC---CCCChhhHHHHHHHHHHHHHHhCCccceEEEccCcceeeec
Q 006252 270 -----------YG---GWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCML 312 (654)
Q Consensus 270 -----------~G---GW~n~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPnv~~~~ 312 (654)
.+ -++||+..+++.+....-+..+|= .-+|.=+|||.++...
T Consensus 367 g~~~~~~~w~~~~a~~DFtnp~~r~Ww~~~~~~~l~d~Gv-~g~W~D~nEp~~~~~~ 422 (772)
T COG1501 367 GEIYQADFWPGNSAFPDFTNPDAREWWASDKKKNLLDLGV-DGFWNDMNEPEPFDGD 422 (772)
T ss_pred CCEeeecccCCcccccCCCCHHHHHHHHHHHHhHHHhcCc-cEEEccCCCCcccccc
Confidence 11 267999999999732222333332 5679999999987655
No 54
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase. Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=48.84 E-value=1.3e+02 Score=32.26 Aligned_cols=104 Identities=13% Similarity=0.171 Sum_probs=70.1
Q ss_pred HHHHHHHHhcCC--CeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcc--------
Q 006252 196 DIELKLAKDTGV--SVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPA-------- 265 (654)
Q Consensus 196 ~eDi~Lmk~lGv--~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~-------- 265 (654)
.+-++.+++.|+ +++=+.+.|..-.- +-++|++-..--..+|++|+++|+++++.+.=+-.+.
T Consensus 33 ~~~~~~~~~~~iP~d~i~iD~~w~~~~g-------~f~~d~~~FPdp~~mi~~l~~~G~k~~l~i~P~i~~~s~~~~e~~ 105 (303)
T cd06592 33 LNYAQEIIDNGFPNGQIEIDDNWETCYG-------DFDFDPTKFPDPKGMIDQLHDLGFRVTLWVHPFINTDSENFREAV 105 (303)
T ss_pred HHHHHHHHHcCCCCCeEEeCCCccccCC-------ccccChhhCCCHHHHHHHHHHCCCeEEEEECCeeCCCCHHHHhhh
Confidence 344788888885 57777777854321 2345544433456899999999999999776332221
Q ss_pred ----ccccc-C-------------C---CCChhhHHHHHHHHHHHHHHhCCccceEEEccCcc
Q 006252 266 ----WAGEY-G-------------G---WKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPH 307 (654)
Q Consensus 266 ----wL~~~-G-------------G---W~n~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPn 307 (654)
++.+. | + ++||+..+++.+..+.++...|= --+|+=+|||.
T Consensus 106 ~~g~~vk~~~g~~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gv-dg~w~D~~E~~ 167 (303)
T cd06592 106 EKGYLVSEPSGDIPALTRWWNGTAAVLDFTNPEAVDWFLSRLKSLQEKYGI-DSFKFDAGEAS 167 (303)
T ss_pred hCCeEEECCCCCCCcccceecCCcceEeCCCHHHHHHHHHHHHHHHHHhCC-cEEEeCCCCcc
Confidence 11111 1 2 67899999999999888877763 35678899996
No 55
>COG5520 O-Glycosyl hydrolase [Cell envelope biogenesis, outer membrane]
Probab=48.12 E-value=4.5e+02 Score=29.65 Aligned_cols=91 Identities=21% Similarity=0.204 Sum_probs=52.2
Q ss_pred hcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHH--HHHHHHHcCCeEEEEeccCCCcccccc----cCCCCChh
Q 006252 204 DTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKW--IINRVRSYGMKVMLTLFHHSLPAWAGE----YGGWKLEK 277 (654)
Q Consensus 204 ~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~--lId~L~~~GI~PiVTL~HwDLP~wL~~----~GGW~n~~ 277 (654)
++|++..|+-|.=.+.--. |..|. .|++ +-...+.+|+..|.+= |.-|.|..+ .||=.-+-
T Consensus 77 ~lg~si~Rv~I~~ndfsl~-------g~~d~----w~kels~Ak~~in~g~ivfASP--WspPa~Mktt~~~ngg~~g~L 143 (433)
T COG5520 77 QLGFSILRVPIDSNDFSLG-------GSADN----WYKELSTAKSAINPGMIVFASP--WSPPASMKTTNNRNGGNAGRL 143 (433)
T ss_pred ccCceEEEEEecccccccC-------CCcch----hhhhcccchhhcCCCcEEEecC--CCCchhhhhccCcCCcccccc
Confidence 5788888888876654321 34442 2333 2334667888888775 778887643 34411111
Q ss_pred hHHHHHHHHHHHH------HHhCCccceEEEccCcc
Q 006252 278 TIDYFMDFTRLVV------DSVSDIVDYWVTFNEPH 307 (654)
Q Consensus 278 ~vd~Fa~YA~~vf------erfGDrVk~WiT~NEPn 307 (654)
=.+.+++||+++. ++-|=.+.+-..=|||.
T Consensus 144 k~e~Ya~yA~~l~~fv~~m~~nGvnlyalSVQNEPd 179 (433)
T COG5520 144 KYEKYADYADYLNDFVLEMKNNGVNLYALSVQNEPD 179 (433)
T ss_pred chhHhHHHHHHHHHHHHHHHhCCCceeEEeeccCCc
Confidence 2244445544432 34455577777889997
No 56
>PLN02361 alpha-amylase
Probab=47.66 E-value=38 Score=38.13 Aligned_cols=69 Identities=13% Similarity=0.223 Sum_probs=46.6
Q ss_pred cCCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChh--HHHHHHHHHHHHHHcCCeEEEEe
Q 006252 190 RFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFA--ALERYKWIINRVRSYGMKVMLTL 258 (654)
Q Consensus 190 ~~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~--Gl~~Yd~lId~L~~~GI~PiVTL 258 (654)
.+|....+-++-+++||++++=++-...-.-+.|--...--.+|.. ..+=+++||++|+++||++|+.+
T Consensus 26 ~~w~~i~~kl~~l~~lG~t~iwl~P~~~~~~~~GY~~~d~y~~~~~~Gt~~el~~li~~~h~~gi~vi~D~ 96 (401)
T PLN02361 26 DWWRNLEGKVPDLAKSGFTSAWLPPPSQSLAPEGYLPQNLYSLNSAYGSEHLLKSLLRKMKQYNVRAMADI 96 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEeCCCCcCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 4888899999999999999998877554333322000000012211 13447899999999999999975
No 57
>KOG2233 consensus Alpha-N-acetylglucosaminidase [Intracellular trafficking, secretion, and vesicular transport]
Probab=46.40 E-value=1.9e+02 Score=33.68 Aligned_cols=115 Identities=17% Similarity=0.273 Sum_probs=67.7
Q ss_pred CCCcHHHHHHHHhcCCCeEEec----ccccccCCC-----------------------CCCCCCccccChhHH----HHH
Q 006252 192 WSDPDIELKLAKDTGVSVFRLG----IDWSRIMPA-----------------------EPVNGLKETVNFAAL----ERY 240 (654)
Q Consensus 192 y~~y~eDi~Lmk~lGv~~yRfS----IsWsRI~P~-----------------------~~~~G~~g~vN~~Gl----~~Y 240 (654)
|.+|+..|+-|+=.|+|..=.. +-|.+|+-. |-+.+-.|...++.. ---
T Consensus 77 w~qWeR~iDWmALnGinl~la~~gQEaIWqkVf~~lgl~~eeldeyftgpAflAW~RMGNl~awgGpLs~aw~~~ql~Lq 156 (666)
T KOG2233|consen 77 WEQWEREIDWMALNGINLVLAPLGQEAIWQKVFMGLGLQREELDEYFTGPAFLAWHRMGNLHAWGGPLSPAWMLNQLLLQ 156 (666)
T ss_pred hHHHHhHhhHHHHcCcceeeccchhHHHHHHHHHHcCCCHHHHHHhcccHHHHHHHHhcCccccCCCCCHHHHHHHHHHH
Confidence 7899999999999999865333 123333211 101111244444442 223
Q ss_pred HHHHHHHHHcCCeEEEEeccCCCcccccc---------cCCCCC---------------hhhHHHHHHHHHHHHHHhCCc
Q 006252 241 KWIINRVRSYGMKVMLTLFHHSLPAWAGE---------YGGWKL---------------EKTIDYFMDFTRLVVDSVSDI 296 (654)
Q Consensus 241 d~lId~L~~~GI~PiVTL~HwDLP~wL~~---------~GGW~n---------------~~~vd~Fa~YA~~vferfGDr 296 (654)
+++|+++++-||+|++--+---.|..|.. -+.|.+ +-+++-=..|-+-..++||.-
T Consensus 157 krIidrm~~lGmTpvLPaFaG~VP~al~rlfPesnf~rl~rWn~f~s~~~C~l~v~P~dplF~eIgs~Flr~~~kefG~~ 236 (666)
T KOG2233|consen 157 KRIIDRMLELGMTPVLPAFAGHVPDALERLFPESNFTRLPRWNNFTSRYSCMLLVSPFDPLFQEIGSTFLRHQIKEFGGV 236 (666)
T ss_pred HHHHHHHHHcCCCccchhhccccHHHHHHhCchhceeeccccCCCCcceeeeEEccCCcchHHHHHHHHHHHHHHHhCCc
Confidence 68999999999999998776667776531 244432 222223334556777899962
Q ss_pred cceE--EEccCc
Q 006252 297 VDYW--VTFNEP 306 (654)
Q Consensus 297 Vk~W--iT~NEP 306 (654)
-..+ =||||.
T Consensus 237 tniy~~DpFNE~ 248 (666)
T KOG2233|consen 237 TNIYSADPFNEI 248 (666)
T ss_pred ccccccCccccc
Confidence 2222 278884
No 58
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily. The DRE-TIM metallolyase superfamily includes 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".
Probab=46.16 E-value=74 Score=32.52 Aligned_cols=83 Identities=14% Similarity=0.121 Sum_probs=57.0
Q ss_pred HHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccccCCCCC
Q 006252 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKL 275 (654)
Q Consensus 196 ~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~~GGW~n 275 (654)
+++++.+++.|++.+|++++-+-+.-.-. .+.=.+..++...+.|..+++.|++..+.+....-|
T Consensus 77 ~~~i~~a~~~g~~~i~i~~~~s~~~~~~~----~~~~~~~~~~~~~~~i~~a~~~G~~v~~~~~~~~~~----------- 141 (265)
T cd03174 77 EKGIERALEAGVDEVRIFDSASETHSRKN----LNKSREEDLENAEEAIEAAKEAGLEVEGSLEDAFGC----------- 141 (265)
T ss_pred hhhHHHHHhCCcCEEEEEEecCHHHHHHH----hCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEeecCC-----------
Confidence 88999999999999999998774211100 000011235667789999999999999998653333
Q ss_pred hhhHHHHHHHHHHHHHHhC
Q 006252 276 EKTIDYFMDFTRLVVDSVS 294 (654)
Q Consensus 276 ~~~vd~Fa~YA~~vferfG 294 (654)
....+.+.++++.+.+ +|
T Consensus 142 ~~~~~~l~~~~~~~~~-~g 159 (265)
T cd03174 142 KTDPEYVLEVAKALEE-AG 159 (265)
T ss_pred CCCHHHHHHHHHHHHH-cC
Confidence 2456777777877653 44
No 59
>COG3534 AbfA Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism]
Probab=45.09 E-value=5.2e+02 Score=30.00 Aligned_cols=97 Identities=19% Similarity=0.273 Sum_probs=57.8
Q ss_pred HHH-HHHHHhcCCCeEEec-------ccccc-cCCCCCC----C---CCccccChhHHHHHHHHHHHHHHcCCeEEEEec
Q 006252 196 DIE-LKLAKDTGVSVFRLG-------IDWSR-IMPAEPV----N---GLKETVNFAALERYKWIINRVRSYGMKVMLTLF 259 (654)
Q Consensus 196 ~eD-i~Lmk~lGv~~yRfS-------IsWsR-I~P~~~~----~---G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~ 259 (654)
+.| ++++|+|.+...|+. ..|.. |=|.... + | ..+-|+=| .+++++.|...|.+|++.+.
T Consensus 51 RkDVle~lk~Lk~P~lR~PGGnFvs~Y~WeDGIGP~e~Rp~rldlaW~-t~EtN~~G---t~EF~~~~e~iGaep~~avN 126 (501)
T COG3534 51 RKDVLEALKDLKIPVLRWPGGNFVSGYHWEDGIGPREERPRRLDLAWG-TTETNEFG---THEFMDWCELIGAEPYIAVN 126 (501)
T ss_pred HHHHHHHHHhcCCceeecCCcccccccccccCcCchhhCchhhccccc-cccccccc---HHHHHHHHHHhCCceEEEEe
Confidence 445 688999999988873 34522 2221100 0 0 00122223 35899999999999999985
Q ss_pred cCCCcccccccCCCCChhhHHHHHHHHHH--------HHHHhCC----ccceEEEccCcc
Q 006252 260 HHSLPAWAGEYGGWKLEKTIDYFMDFTRL--------VVDSVSD----IVDYWVTFNEPH 307 (654)
Q Consensus 260 HwDLP~wL~~~GGW~n~~~vd~Fa~YA~~--------vferfGD----rVk~WiT~NEPn 307 (654)
= |. ..-+....|.+||.. .=...|- .||||..=||-.
T Consensus 127 ~----------Gs-rgvd~ar~~vEY~n~pggtywsdlR~~~G~~~P~nvK~w~lGNEm~ 175 (501)
T COG3534 127 L----------GS-RGVDEARNWVEYCNHPGGTYWSDLRRENGREEPWNVKYWGLGNEMD 175 (501)
T ss_pred c----------CC-ccHHHHHHHHHHccCCCCChhHHHHHhcCCCCCcccceEEeccccC
Confidence 2 11 234666777777752 2223333 389999999963
No 60
>PRK12399 tagatose 1,6-diphosphate aldolase; Reviewed
Probab=40.68 E-value=1.7e+02 Score=32.21 Aligned_cols=59 Identities=12% Similarity=0.129 Sum_probs=49.6
Q ss_pred HHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCc
Q 006252 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLP 264 (654)
Q Consensus 198 Di~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP 264 (654)
.++.+|++|.++..|=+-|. |++ ...+|..-.+|..++.++|++.||--++=+.-+|.+
T Consensus 110 S~~rike~GadavK~Llyy~---pD~-----~~~in~~k~a~vervg~eC~a~dipf~lE~ltY~~~ 168 (324)
T PRK12399 110 SAKRIKEEGADAVKFLLYYD---VDE-----PDEINEQKKAYIERIGSECVAEDIPFFLEILTYDEK 168 (324)
T ss_pred hHHHHHHhCCCeEEEEEEEC---CCC-----CHHHHHHHHHHHHHHHHHHHHCCCCeEEEEeeccCc
Confidence 48999999999999988886 443 246899999999999999999999999887765544
No 61
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=40.55 E-value=60 Score=30.89 Aligned_cols=55 Identities=11% Similarity=0.183 Sum_probs=39.7
Q ss_pred cHHHHHHHHhcCCCeEEecc------cc--cccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEe
Q 006252 195 PDIELKLAKDTGVSVFRLGI------DW--SRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTL 258 (654)
Q Consensus 195 y~eDi~Lmk~lGv~~yRfSI------sW--sRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL 258 (654)
.++=++.+|++|+++.-+.. +| +++.+. ....+ -+...++|+.|+++||++++=+
T Consensus 2 ~~~~~~~lk~~~v~si~i~a~~h~g~ayYPt~~~~~--------hp~L~-~Dllge~v~a~h~~Girv~ay~ 64 (132)
T PF14871_consen 2 PEQFVDTLKEAHVNSITIFAKCHGGYAYYPTKVGPR--------HPGLK-RDLLGEQVEACHERGIRVPAYF 64 (132)
T ss_pred HHHHHHHHHHhCCCEEEEEcccccEEEEccCCCCcC--------CCCCC-cCHHHHHHHHHHHCCCEEEEEE
Confidence 35668999999999999933 23 334332 22223 4778899999999999999865
No 62
>cd07945 DRE_TIM_CMS Leptospira interrogans citramalate synthase (CMS) and related proteins, N-terminal catalytic TIM barrel domain. Citramalate synthase (CMS) catalyzes the conversion of pyruvate and acetyl-CoA to (R)-citramalate in the first dedicated step of the citramalate pathway. Citramalate is only found in Leptospira interrogans and a few other microorganisms. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center con
Probab=39.02 E-value=86 Score=33.43 Aligned_cols=86 Identities=19% Similarity=0.183 Sum_probs=63.4
Q ss_pred CcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccccCCC
Q 006252 194 DPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGW 273 (654)
Q Consensus 194 ~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~~GGW 273 (654)
+-+.|++++++.|++..++.++=|...-... -+.--++.++-+.++|..++++|+++.+++-+|.-|.
T Consensus 75 ~~~~~~~~A~~~g~~~i~i~~~~S~~h~~~~----~~~t~~e~l~~~~~~i~~a~~~G~~v~~~~~d~~~~~-------- 142 (280)
T cd07945 75 DGDKSVDWIKSAGAKVLNLLTKGSLKHCTEQ----LRKTPEEHFADIREVIEYAIKNGIEVNIYLEDWSNGM-------- 142 (280)
T ss_pred CcHHHHHHHHHCCCCEEEEEEeCCHHHHHHH----HCcCHHHHHHHHHHHHHHHHhCCCEEEEEEEeCCCCC--------
Confidence 4467999999999999999996665544320 0122356788899999999999999999998876663
Q ss_pred CChhhHHHHHHHHHHHHHHhC
Q 006252 274 KLEKTIDYFMDFTRLVVDSVS 294 (654)
Q Consensus 274 ~n~~~vd~Fa~YA~~vferfG 294 (654)
+..++.+.++++.+.+ .|
T Consensus 143 --r~~~~~~~~~~~~~~~-~G 160 (280)
T cd07945 143 --RDSPDYVFQLVDFLSD-LP 160 (280)
T ss_pred --cCCHHHHHHHHHHHHH-cC
Confidence 2235777888887754 45
No 63
>PRK12581 oxaloacetate decarboxylase; Provisional
Probab=38.92 E-value=1.1e+02 Score=35.36 Aligned_cols=73 Identities=16% Similarity=0.358 Sum_probs=56.7
Q ss_pred CCCcHHH-----HHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCccc
Q 006252 192 WSDPDIE-----LKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAW 266 (654)
Q Consensus 192 y~~y~eD-----i~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~w 266 (654)
|..|..| ++++++.|++.+|..-.... ++--...|+.+++.|....+++.|=+.|
T Consensus 99 y~~ypddvv~~fv~~a~~~Gidi~Rifd~lnd------------------~~n~~~ai~~ak~~G~~~~~~i~yt~sp-- 158 (468)
T PRK12581 99 YRHYADDIVDKFISLSAQNGIDVFRIFDALND------------------PRNIQQALRAVKKTGKEAQLCIAYTTSP-- 158 (468)
T ss_pred ccCCcchHHHHHHHHHHHCCCCEEEEcccCCC------------------HHHHHHHHHHHHHcCCEEEEEEEEEeCC--
Confidence 5667778 99999999999998764432 2234568999999999999999886666
Q ss_pred ccccCCCCChhhHHHHHHHHHHHHHHhC
Q 006252 267 AGEYGGWKLEKTIDYFMDFTRLVVDSVS 294 (654)
Q Consensus 267 L~~~GGW~n~~~vd~Fa~YA~~vferfG 294 (654)
..+++++.+.|+.+.+ .|
T Consensus 159 ---------~~t~~y~~~~a~~l~~-~G 176 (468)
T PRK12581 159 ---------VHTLNYYLSLVKELVE-MG 176 (468)
T ss_pred ---------cCcHHHHHHHHHHHHH-cC
Confidence 4478899999998764 44
No 64
>cd07939 DRE_TIM_NifV Streptomyces rubellomurinus FrbC and related proteins, catalytic TIM barrel domain. FrbC (NifV) of Streptomyces rubellomurinus catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate to form homocitrate and CoA, a reaction similar to one catalyzed by homocitrate synthase. The gene encoding FrbC is one of several genes required for the biosynthesis of FR900098, a potent antimalarial antibiotic. This protein is also required for assembly of the nitrogenase MoFe complex but its exact role is unknown. This family also includes the NifV proteins of Heliobacterium chlorum and Gluconacetobacter diazotrophicus, which appear to be orthologous to FrbC. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarbox
Probab=37.74 E-value=83 Score=32.77 Aligned_cols=81 Identities=16% Similarity=0.256 Sum_probs=56.3
Q ss_pred HHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccccCCCCC
Q 006252 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKL 275 (654)
Q Consensus 196 ~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~~GGW~n 275 (654)
.+|++.+.+.|++.+|+.++.|.+.-... -+.=-++.++-..++++.++++|+++.+++- ..+
T Consensus 72 ~~~v~~a~~~g~~~i~i~~~~s~~~~~~~----~~~~~~~~~~~~~~~i~~a~~~G~~v~~~~~----------~~~--- 134 (259)
T cd07939 72 KEDIEAALRCGVTAVHISIPVSDIHLAHK----LGKDRAWVLDQLRRLVGRAKDRGLFVSVGAE----------DAS--- 134 (259)
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHH----hCCCHHHHHHHHHHHHHHHHHCCCeEEEeec----------cCC---
Confidence 78999999999999999998886643210 0111246678888999999999998775552 112
Q ss_pred hhhHHHHHHHHHHHHHHhC
Q 006252 276 EKTIDYFMDFTRLVVDSVS 294 (654)
Q Consensus 276 ~~~vd~Fa~YA~~vferfG 294 (654)
+...+...+.++.+.+ .|
T Consensus 135 ~~~~~~~~~~~~~~~~-~G 152 (259)
T cd07939 135 RADPDFLIEFAEVAQE-AG 152 (259)
T ss_pred CCCHHHHHHHHHHHHH-CC
Confidence 2335667777777654 45
No 65
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain. This family of bacterial enzymes is sequence-similar to 4-hydroxy-2-oxovalerate aldolase (HOA) but its exact function is unknown. This family includes the Bacteroides vulgatus Bvu_2661 protein and belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues t
Probab=35.92 E-value=1.3e+02 Score=31.64 Aligned_cols=67 Identities=16% Similarity=0.231 Sum_probs=51.2
Q ss_pred HHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccccCCCCC
Q 006252 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKL 275 (654)
Q Consensus 196 ~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~~GGW~n 275 (654)
.+|++...+.|++.+|+++..+. ++-...+++.++++|+++.+++.+-.
T Consensus 85 ~~~l~~a~~~gv~~iri~~~~~~------------------~~~~~~~i~~ak~~G~~v~~~~~~a~------------- 133 (266)
T cd07944 85 IDLLEPASGSVVDMIRVAFHKHE------------------FDEALPLIKAIKEKGYEVFFNLMAIS------------- 133 (266)
T ss_pred HHHHHHHhcCCcCEEEEeccccc------------------HHHHHHHHHHHHHCCCeEEEEEEeec-------------
Confidence 57999999999999999874432 45567899999999999999886521
Q ss_pred hhhHHHHHHHHHHHHHHhC
Q 006252 276 EKTIDYFMDFTRLVVDSVS 294 (654)
Q Consensus 276 ~~~vd~Fa~YA~~vferfG 294 (654)
+...+.+.++++.+.+ +|
T Consensus 134 ~~~~~~~~~~~~~~~~-~g 151 (266)
T cd07944 134 GYSDEELLELLELVNE-IK 151 (266)
T ss_pred CCCHHHHHHHHHHHHh-CC
Confidence 1346778888888754 44
No 66
>PRK04161 tagatose 1,6-diphosphate aldolase; Reviewed
Probab=35.88 E-value=2.2e+02 Score=31.50 Aligned_cols=59 Identities=14% Similarity=0.148 Sum_probs=50.0
Q ss_pred HHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCc
Q 006252 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLP 264 (654)
Q Consensus 198 Di~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP 264 (654)
+++.+|++|.++..|=+-|. |++ +..+|..-.+|..++.++|++.||--++=+.-+|.+
T Consensus 112 s~~rike~GadavK~Llyy~---pD~-----~~ein~~k~a~vervg~eC~a~dipf~lE~l~Yd~~ 170 (329)
T PRK04161 112 SVKRLKEAGADAVKFLLYYD---VDG-----DEEINDQKQAYIERIGSECTAEDIPFFLELLTYDER 170 (329)
T ss_pred hHHHHHHhCCCeEEEEEEEC---CCC-----CHHHHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCc
Confidence 58999999999999988886 443 246899999999999999999999999988766544
No 67
>TIGR02631 xylA_Arthro xylose isomerase, Arthrobacter type. This model describes a D-xylose isomerase that is also active as a D-glucose isomerase. It is tetrameric and dependent on a divalent cation Mg2+, Co2+ or Mn2+ as characterized in Arthrobacter. Members of this family differ substantially from the D-xylose isomerases of family TIGR02630.
Probab=35.70 E-value=4.3e+02 Score=29.50 Aligned_cols=76 Identities=17% Similarity=0.170 Sum_probs=46.1
Q ss_pred cCCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEE-EEeccCCCccccc
Q 006252 190 RFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVM-LTLFHHSLPAWAG 268 (654)
Q Consensus 190 ~~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~Pi-VTL~HwDLP~wL~ 268 (654)
.-+-+..+-|+.++++|++.+=| ....+.|.+ ....+--..++++-..|.++||++. +|..-|..|.+
T Consensus 29 ~~~~~~~e~i~~la~~GfdgVE~--~~~dl~P~~-------~~~~e~~~~~~~lk~~L~~~GL~v~~v~~nl~~~~~~-- 97 (382)
T TIGR02631 29 RTALDPVEAVHKLAELGAYGVTF--HDDDLIPFG-------APPQERDQIVRRFKKALDETGLKVPMVTTNLFSHPVF-- 97 (382)
T ss_pred CCCcCHHHHHHHHHHhCCCEEEe--cccccCCCC-------CChhHHHHHHHHHHHHHHHhCCeEEEeeccccCCccc--
Confidence 45567889999999999998843 334455642 1111111235677888999999955 44422222323
Q ss_pred ccCCCCCh
Q 006252 269 EYGGWKLE 276 (654)
Q Consensus 269 ~~GGW~n~ 276 (654)
..||+.++
T Consensus 98 ~~g~las~ 105 (382)
T TIGR02631 98 KDGGFTSN 105 (382)
T ss_pred cCCCCCCC
Confidence 33677764
No 68
>PRK14040 oxaloacetate decarboxylase; Provisional
Probab=35.21 E-value=1.3e+02 Score=35.64 Aligned_cols=71 Identities=20% Similarity=0.255 Sum_probs=51.5
Q ss_pred CCCcHHH-----HHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCccc
Q 006252 192 WSDPDIE-----LKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAW 266 (654)
Q Consensus 192 y~~y~eD-----i~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~w 266 (654)
|.+|.+| ++..++.|++.+|+..+.+-+ +--...|+..+++|....+++.+=+.|
T Consensus 91 ~~~ypddvv~~~v~~a~~~Gid~~rifd~lnd~------------------~~~~~ai~~ak~~G~~~~~~i~yt~~p-- 150 (593)
T PRK14040 91 YRHYADDVVERFVERAVKNGMDVFRVFDAMNDP------------------RNLETALKAVRKVGAHAQGTLSYTTSP-- 150 (593)
T ss_pred cccCcHHHHHHHHHHHHhcCCCEEEEeeeCCcH------------------HHHHHHHHHHHHcCCeEEEEEEEeeCC--
Confidence 5556555 999999999999999654332 234567889999999887777653334
Q ss_pred ccccCCCCChhhHHHHHHHHHHHHH
Q 006252 267 AGEYGGWKLEKTIDYFMDFTRLVVD 291 (654)
Q Consensus 267 L~~~GGW~n~~~vd~Fa~YA~~vfe 291 (654)
.++.+++.+.++.+.+
T Consensus 151 ---------~~~~~~~~~~a~~l~~ 166 (593)
T PRK14040 151 ---------VHTLQTWVDLAKQLED 166 (593)
T ss_pred ---------ccCHHHHHHHHHHHHH
Confidence 3357888888887654
No 69
>PRK14041 oxaloacetate decarboxylase; Provisional
Probab=35.01 E-value=1.2e+02 Score=34.82 Aligned_cols=73 Identities=19% Similarity=0.331 Sum_probs=55.2
Q ss_pred CCCcHHH-----HHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCccc
Q 006252 192 WSDPDIE-----LKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAW 266 (654)
Q Consensus 192 y~~y~eD-----i~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~w 266 (654)
|..|.+| |+.+.+.|++.+|+.++-+.+ +-....|+..+++|+....++.+-..|
T Consensus 89 ~~~~~dDvv~~fv~~A~~~Gvd~irif~~lnd~------------------~n~~~~i~~ak~~G~~v~~~i~~t~~p-- 148 (467)
T PRK14041 89 YRHYADDVVELFVKKVAEYGLDIIRIFDALNDI------------------RNLEKSIEVAKKHGAHVQGAISYTVSP-- 148 (467)
T ss_pred cccccchhhHHHHHHHHHCCcCEEEEEEeCCHH------------------HHHHHHHHHHHHCCCEEEEEEEeccCC--
Confidence 4667788 999999999999999866543 224567899999999998888654434
Q ss_pred ccccCCCCChhhHHHHHHHHHHHHHHhC
Q 006252 267 AGEYGGWKLEKTIDYFMDFTRLVVDSVS 294 (654)
Q Consensus 267 L~~~GGW~n~~~vd~Fa~YA~~vferfG 294 (654)
+...+++.++|+.+.+ .|
T Consensus 149 ---------~~t~e~~~~~a~~l~~-~G 166 (467)
T PRK14041 149 ---------VHTLEYYLEFARELVD-MG 166 (467)
T ss_pred ---------CCCHHHHHHHHHHHHH-cC
Confidence 3357889999997665 44
No 70
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
Probab=34.81 E-value=1.6e+02 Score=32.33 Aligned_cols=104 Identities=13% Similarity=0.180 Sum_probs=61.1
Q ss_pred HHHHHhcCC--CeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccC-CCcccccccC---C
Q 006252 199 LKLAKDTGV--SVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHH-SLPAWAGEYG---G 272 (654)
Q Consensus 199 i~Lmk~lGv--~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~Hw-DLP~wL~~~G---G 272 (654)
++.+++.++ +++=+.|.|..-.- .-++|++-..--..++++|++.|++.++.+.-+ ..-......| -
T Consensus 30 ~~~~r~~~IP~D~i~lDidy~~~~~-------~Ft~d~~~FPdp~~mv~~L~~~G~klv~~i~P~i~~g~~~~~~~~~pD 102 (332)
T cd06601 30 VEGYRDNNIPLDGLHVDVDFQDNYR-------TFTTNGGGFPNPKEMFDNLHNKGLKCSTNITPVISYGGGLGSPGLYPD 102 (332)
T ss_pred HHHHHHcCCCCceEEEcCchhcCCC-------ceeecCCCCCCHHHHHHHHHHCCCeEEEEecCceecCccCCCCceeeC
Confidence 455555554 56666666642111 123444332223679999999999988766411 1000011112 3
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCccceEEEccCcceeee
Q 006252 273 WKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCM 311 (654)
Q Consensus 273 W~n~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPnv~~~ 311 (654)
|+|++..+++.+.-+.+.+ .|= .-+|+=+|||.+++.
T Consensus 103 ftnp~ar~wW~~~~~~l~~-~Gv-~~~W~DmnEp~~~~~ 139 (332)
T cd06601 103 LGRPDVREWWGNQYKYLFD-IGL-EFVWQDMTTPAIMPS 139 (332)
T ss_pred CCCHHHHHHHHHHHHHHHh-CCC-ceeecCCCCcccccC
Confidence 6789999998776655443 343 348999999998765
No 71
>PRK12677 xylose isomerase; Provisional
Probab=34.75 E-value=5.3e+02 Score=28.81 Aligned_cols=80 Identities=13% Similarity=0.113 Sum_probs=48.8
Q ss_pred CcccccCCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEE-EEeccCCC
Q 006252 185 PEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVM-LTLFHHSL 263 (654)
Q Consensus 185 pe~a~~~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~Pi-VTL~HwDL 263 (654)
++.+...+ ..+|-++.++++|++.+=+.. ..+.|.. ....+--....++-..+.++||+.. +|...|..
T Consensus 24 g~~~~~~~-~~~E~v~~~a~~Gf~gVElh~--~~l~p~~-------~~~~~~~~~~~~lk~~l~~~GL~v~~v~~n~f~~ 93 (384)
T PRK12677 24 GDATRPPL-DPVEAVHKLAELGAYGVTFHD--DDLVPFG-------ATDAERDRIIKRFKKALDETGLVVPMVTTNLFTH 93 (384)
T ss_pred CCCCCCCC-CHHHHHHHHHHhCCCEEEecc--cccCCCC-------CChhhhHHHHHHHHHHHHHcCCeeEEEecCCCCC
Confidence 33334555 478899999999999886632 2344432 1111111245678888889999965 56554544
Q ss_pred cccccccCCCCCh
Q 006252 264 PAWAGEYGGWKLE 276 (654)
Q Consensus 264 P~wL~~~GGW~n~ 276 (654)
|.+ ..|++.++
T Consensus 94 p~~--~~g~lts~ 104 (384)
T PRK12677 94 PVF--KDGAFTSN 104 (384)
T ss_pred ccc--cCCcCCCC
Confidence 533 34788773
No 72
>PLN00196 alpha-amylase; Provisional
Probab=34.03 E-value=97 Score=35.14 Aligned_cols=68 Identities=10% Similarity=0.087 Sum_probs=44.8
Q ss_pred CCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccCh---hHHHHHHHHHHHHHHcCCeEEEEe
Q 006252 191 FWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNF---AALERYKWIINRVRSYGMKVMLTL 258 (654)
Q Consensus 191 ~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~---~Gl~~Yd~lId~L~~~GI~PiVTL 258 (654)
+|....+.+.-+++||++++=++-.....-+.+--...--.+|. -..+=+++||++++++||++|+..
T Consensus 42 ~~~~i~~kldyL~~LGvtaIWL~P~~~s~s~hGY~~~D~y~ld~~~fGt~~elk~Lv~~aH~~GIkVilDv 112 (428)
T PLN00196 42 WYNFLMGKVDDIAAAGITHVWLPPPSHSVSEQGYMPGRLYDLDASKYGNEAQLKSLIEAFHGKGVQVIADI 112 (428)
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCccccCCCCcccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 56667889999999999999988755433222100000011321 013347899999999999999974
No 73
>cd07948 DRE_TIM_HCS Saccharomyces cerevisiae homocitrate synthase and related proteins, catalytic TIM barrel domain. Homocitrate synthase (HCS) catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate to form homocitrate, the first step in the lysine biosynthesis pathway. This family includes the Yarrowia lipolytica LYS1 protein as well as the Saccharomyces cerevisiae LYS20 and LYS21 proteins. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. Th
Probab=33.19 E-value=65 Score=33.97 Aligned_cols=60 Identities=20% Similarity=0.155 Sum_probs=45.5
Q ss_pred HHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEec
Q 006252 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF 259 (654)
Q Consensus 196 ~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~ 259 (654)
.+||+.+.+.|++.+|+.++=|..+-... .+.=-++.++...++|..++++|+++.+++-
T Consensus 74 ~~di~~a~~~g~~~i~i~~~~S~~~~~~~----~~~~~~e~~~~~~~~i~~a~~~G~~v~~~~e 133 (262)
T cd07948 74 MDDARIAVETGVDGVDLVFGTSPFLREAS----HGKSITEIIESAVEVIEFVKSKGIEVRFSSE 133 (262)
T ss_pred HHHHHHHHHcCcCEEEEEEecCHHHHHHH----hCCCHHHHHHHHHHHHHHHHHCCCeEEEEEE
Confidence 67999999999999999986655432210 0111246688899999999999999998884
No 74
>PF05089 NAGLU: Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain; InterPro: IPR024733 Alpha-N-acetylglucosaminidase is a lysosomal enzyme that is required for the stepwise degradation of heparan sulphate []. Mutations on the alpha-N-acetylglucosaminidase gene can lead to mucopolysaccharidosis type IIIB (MPS IIIB; or Sanfilippo syndrome type B), characterised by neurological dysfunction but relatively mild somatic manifestations []. Alpha-N-acetylglucosaminidase is composed of three domains. This entry represents the central domain, which has a tim barrel fold [].; PDB: 4A4A_A 2VC9_A 2VCC_A 2VCB_A 2VCA_A.
Probab=33.06 E-value=1e+02 Score=34.08 Aligned_cols=110 Identities=23% Similarity=0.390 Sum_probs=55.6
Q ss_pred CCCcHHHHHHHHhcCCCeEE---------------ecc---------------cccccCCCCCCCCCccccChhHH----
Q 006252 192 WSDPDIELKLAKDTGVSVFR---------------LGI---------------DWSRIMPAEPVNGLKETVNFAAL---- 237 (654)
Q Consensus 192 y~~y~eDi~Lmk~lGv~~yR---------------fSI---------------sWsRI~P~~~~~G~~g~vN~~Gl---- 237 (654)
|+||+..|+.|+=-|||.-= |++ .|.|.-- +.|..|.+.++.+
T Consensus 18 W~rWEreIDWMALnGiNl~La~~GqEavw~~v~~~~G~t~~ei~~ff~GPA~laW~rMgN---l~gwgGPLp~~w~~~q~ 94 (333)
T PF05089_consen 18 WERWEREIDWMALNGINLPLAIVGQEAVWQRVLRELGLTDEEIREFFTGPAFLAWWRMGN---LQGWGGPLPQSWIDQQA 94 (333)
T ss_dssp HHHHHHHHHHHHHTT--EEE--TTHHHHHHHHHGGGT--HHHHHHHS--TT-HHHHHTTS-----STT----TTHHHHHH
T ss_pred HHHHHHHHHHHHHhCCchhhhhhHHHHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHhCC---cccCCCCCCHHHHHHHH
Confidence 77888899998888888642 221 2444321 2334455554442
Q ss_pred HHHHHHHHHHHHcCCeEEEEeccCCCcccccc---------cCCCC--------ChhhHHHHHHHHHHHH----HHhCCc
Q 006252 238 ERYKWIINRVRSYGMKVMLTLFHHSLPAWAGE---------YGGWK--------LEKTIDYFMDFTRLVV----DSVSDI 296 (654)
Q Consensus 238 ~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~---------~GGW~--------n~~~vd~Fa~YA~~vf----erfGDr 296 (654)
+-=+++++++++.||+|++-=|-=-.|..+.+ .|.|. +|. -..|.+.++... +.|| .
T Consensus 95 ~Lq~kIl~RmreLGm~PVLPaF~G~VP~~~~~~~P~a~i~~~~~W~~f~~~~~L~P~-dplF~~i~~~F~~~q~~~yG-~ 172 (333)
T PF05089_consen 95 ELQKKILDRMRELGMTPVLPAFAGHVPRAFKRKYPNANITRQGNWNGFCRPYFLDPT-DPLFAEIAKLFYEEQIKLYG-T 172 (333)
T ss_dssp HHHHHHHHHHHHHT-EEEEE--S-EE-TTHHHHSTT--EE---EETTEE--EEE-SS---HHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHcCCcccCCCcCCCCChHHHhcCCCCEEeeCCCcCCCCCCceeCCC-CchHHHHHHHHHHHHHHhcC-C
Confidence 33468999999999999998775556776532 23332 232 256777666544 6788 4
Q ss_pred cceEE--EccCc
Q 006252 297 VDYWV--TFNEP 306 (654)
Q Consensus 297 Vk~Wi--T~NEP 306 (654)
-.++. +|||-
T Consensus 173 ~~~Y~~D~FnE~ 184 (333)
T PF05089_consen 173 DHIYAADPFNEG 184 (333)
T ss_dssp -SEEE--TTTTS
T ss_pred CceeCCCccCCC
Confidence 45554 67774
No 75
>PF07488 Glyco_hydro_67M: Glycosyl hydrolase family 67 middle domain; InterPro: IPR011100 Alpha-glucuronidases, components of an ensemble of enzymes central to the recycling of photosynthetic biomass, remove the alpha-1,2 linked 4-O-methyl glucuronic acid from xylans. This family represents the central catalytic domain of alpha-glucuronidase [].; GO: 0046559 alpha-glucuronidase activity, 0045493 xylan catabolic process, 0005576 extracellular region; PDB: 1MQP_A 1K9E_A 1MQQ_A 1L8N_A 1K9D_A 1MQR_A 1K9F_A 1GQL_A 1GQI_B 1GQJ_B ....
Probab=32.44 E-value=2.3e+02 Score=31.11 Aligned_cols=89 Identities=16% Similarity=0.175 Sum_probs=61.0
Q ss_pred CCcHHHHHHHHhcCCCeEEecc---cccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccc
Q 006252 193 SDPDIELKLAKDTGVSVFRLGI---DWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGE 269 (654)
Q Consensus 193 ~~y~eDi~Lmk~lGv~~yRfSI---sWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~ 269 (654)
.||.+--++++++|+|..-+.= .-..|. .+-++.+.++-+-++.+||++.+++. |.-|..+..
T Consensus 57 ~R~~~YARllASiGINgvvlNNVNa~~~~Lt-------------~~~l~~v~~lAdvfRpYGIkv~LSvn-FasP~~lgg 122 (328)
T PF07488_consen 57 TRYRDYARLLASIGINGVVLNNVNANPKLLT-------------PEYLDKVARLADVFRPYGIKVYLSVN-FASPIELGG 122 (328)
T ss_dssp HHHHHHHHHHHHTT--EEE-S-SS--CGGGS-------------TTTHHHHHHHHHHHHHTT-EEEEEE--TTHHHHTTS
T ss_pred hHHHHHHHHHhhcCCceEEecccccChhhcC-------------HHHHHHHHHHHHHHhhcCCEEEEEee-ccCCcccCC
Confidence 4677778999999999876431 222222 23367788999999999999999995 677766521
Q ss_pred c--CCCCChhhHHHHHHHHHHHHHHhCC
Q 006252 270 Y--GGWKLEKTIDYFMDFTRLVVDSVSD 295 (654)
Q Consensus 270 ~--GGW~n~~~vd~Fa~YA~~vferfGD 295 (654)
. --=++++++.|+.+=++.+.+...|
T Consensus 123 L~TaDPld~~V~~WW~~k~~eIY~~IPD 150 (328)
T PF07488_consen 123 LPTADPLDPEVRQWWKDKADEIYSAIPD 150 (328)
T ss_dssp -S---TTSHHHHHHHHHHHHHHHHH-TT
T ss_pred cCcCCCCCHHHHHHHHHHHHHHHHhCCC
Confidence 1 1135799999999999999999887
No 76
>PRK05692 hydroxymethylglutaryl-CoA lyase; Provisional
Probab=32.43 E-value=1.3e+02 Score=32.26 Aligned_cols=87 Identities=15% Similarity=0.096 Sum_probs=61.9
Q ss_pred CcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEecc-CCCcccccccCC
Q 006252 194 DPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFH-HSLPAWAGEYGG 272 (654)
Q Consensus 194 ~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~H-wDLP~wL~~~GG 272 (654)
.-.+|++++.+.|++.+++.++=|...-... -+.--++.++-..+.|+..+++|++..+++.. |..| +.|
T Consensus 80 ~~~~~ie~A~~~g~~~v~i~~~~s~~~~~~n----~~~~~~e~l~~~~~~v~~ak~~g~~v~~~i~~~~~~~-----~~~ 150 (287)
T PRK05692 80 PNLKGLEAALAAGADEVAVFASASEAFSQKN----INCSIAESLERFEPVAEAAKQAGVRVRGYVSCVLGCP-----YEG 150 (287)
T ss_pred cCHHHHHHHHHcCCCEEEEEEecCHHHHHHH----hCCCHHHHHHHHHHHHHHHHHcCCEEEEEEEEEecCC-----CCC
Confidence 4589999999999999999987665432110 12223456888899999999999999887763 4444 233
Q ss_pred CCChhhHHHHHHHHHHHHHH
Q 006252 273 WKLEKTIDYFMDFTRLVVDS 292 (654)
Q Consensus 273 W~n~~~vd~Fa~YA~~vfer 292 (654)
. -..+.+.++++.+.+.
T Consensus 151 ~---~~~~~~~~~~~~~~~~ 167 (287)
T PRK05692 151 E---VPPEAVADVAERLFAL 167 (287)
T ss_pred C---CCHHHHHHHHHHHHHc
Confidence 2 3467888888888653
No 77
>cd06543 GH18_PF-ChiA-like PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain. Members of this domain family are found not only in archaea but also in eukaryotes and prokaryotes. PF-ChiA exhibits hydrolytic activity toward both colloidal and crystalline (beta/alpha) chitins at high temperature.
Probab=31.59 E-value=1.8e+02 Score=31.25 Aligned_cols=78 Identities=24% Similarity=0.243 Sum_probs=49.9
Q ss_pred HHHHhcCCCeEEeccc--ccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccccCCCCC--
Q 006252 200 KLAKDTGVSVFRLGID--WSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKL-- 275 (654)
Q Consensus 200 ~Lmk~lGv~~yRfSIs--WsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~~GGW~n-- 275 (654)
+.+.+.|++++=++.- -..-.|.- .| ....+ ........|..|+++|++.+|.+ |||..
T Consensus 19 ~~~~~~g~~~v~lAFi~~~~~~~~~w--~g-~~~~~--~~~~~~~~i~~lk~~G~kViiS~------------GG~~g~~ 81 (294)
T cd06543 19 TYAAATGVKAFTLAFIVASGGCKPAW--GG-SYPLD--QGGWIKSDIAALRAAGGDVIVSF------------GGASGTP 81 (294)
T ss_pred HHHHHcCCCEEEEEEEEcCCCCcccC--CC-CCCcc--cchhHHHHHHHHHHcCCeEEEEe------------cCCCCCc
Confidence 5788899999887753 11111110 00 00111 02234568999999999999988 56553
Q ss_pred ----hhhHHHHHHHHHHHHHHhC
Q 006252 276 ----EKTIDYFMDFTRLVVDSVS 294 (654)
Q Consensus 276 ----~~~vd~Fa~YA~~vferfG 294 (654)
+..++.|++....+.++||
T Consensus 82 ~~~~~~~~~~~~~a~~~~i~~y~ 104 (294)
T cd06543 82 LATSCTSADQLAAAYQKVIDAYG 104 (294)
T ss_pred cccCcccHHHHHHHHHHHHHHhC
Confidence 4677888888887888886
No 78
>PLN02784 alpha-amylase
Probab=31.32 E-value=97 Score=38.34 Aligned_cols=69 Identities=14% Similarity=0.157 Sum_probs=47.2
Q ss_pred cCCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChh--HHHHHHHHHHHHHHcCCeEEEEe
Q 006252 190 RFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFA--ALERYKWIINRVRSYGMKVMLTL 258 (654)
Q Consensus 190 ~~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~--Gl~~Yd~lId~L~~~GI~PiVTL 258 (654)
.||....+.++-+++||++++=++-...-.-+.|--...-..+|.. ..+=++.||+.|+++||++|+.+
T Consensus 518 ~w~~~I~ekldyL~~LG~taIWLpP~~~s~s~~GY~p~D~y~lds~yGT~~ELk~LI~a~H~~GIkVIlDi 588 (894)
T PLN02784 518 RWYMELGEKAAELSSLGFTVVWLPPPTESVSPEGYMPKDLYNLNSRYGTIDELKDLVKSFHEVGIKVLGDA 588 (894)
T ss_pred chHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCcCcccccccCcCcCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 6788899999999999999998877544443322100000112221 13457899999999999999984
No 79
>cd06525 GH25_Lyc-like Lyc muramidase is an autolytic lysozyme (autolysin) from Clostridium acetobutylicum encoded by the lyc gene. Lyc has a glycosyl hydrolase family 25 (GH25) catalytic domain. Endo-N-acetylmuramidases are lysozymes (also referred to as peptidoglycan hydrolases) that degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues.
Probab=31.20 E-value=2.4e+02 Score=27.70 Aligned_cols=85 Identities=19% Similarity=0.233 Sum_probs=51.2
Q ss_pred HHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCc------------
Q 006252 197 IELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLP------------ 264 (654)
Q Consensus 197 eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP------------ 264 (654)
-|.+.+|+.|++..=+=+. + | .+.+|+ +|..-++.+++.|| .+..|||-.|
T Consensus 12 id~~~~k~~gi~fviiKat------e----G-~~y~D~----~~~~~~~~a~~aGl--~~G~Yhy~~~~~~a~~qA~~f~ 74 (184)
T cd06525 12 INFNAVKDSGVEVVYIKAT------E----G-TTFVDS----YFNENYNGAKAAGL--KVGFYHFLVGTSNPEEQAENFY 74 (184)
T ss_pred CCHHHHHhCCCeEEEEEec------C----C-CcccCH----hHHHHHHHHHHCCC--ceEEEEEeeCCCCHHHHHHHHH
Confidence 3677788877664322221 1 2 245674 67888999999999 3688997544
Q ss_pred -----------ccc--cccCCCCChhhHHHHHHHHHHHHHHhCCccc
Q 006252 265 -----------AWA--GEYGGWKLEKTIDYFMDFTRLVVDSVSDIVD 298 (654)
Q Consensus 265 -----------~wL--~~~GGW~n~~~vd~Fa~YA~~vferfGDrVk 298 (654)
.+| +..+++...+..+....|.+.+-++.|-++-
T Consensus 75 ~~~~~~~~~~~~~lD~E~~~~~~~~~~~~~~~~f~~~v~~~~G~~~~ 121 (184)
T cd06525 75 NTIKGKKMDLKPALDVEVNFGLSKDELNDYVLRFIEEFEKLSGLKVG 121 (184)
T ss_pred HhccccCCCCCeEEEEecCCCCCHHHHHHHHHHHHHHHHHHHCCCeE
Confidence 333 1223443344456667777777666665443
No 80
>PRK05402 glycogen branching enzyme; Provisional
Probab=30.40 E-value=2.3e+02 Score=34.30 Aligned_cols=88 Identities=9% Similarity=0.155 Sum_probs=55.2
Q ss_pred HHH-HHHHHhcCCCeEEeccccc---------------ccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEec
Q 006252 196 DIE-LKLAKDTGVSVFRLGIDWS---------------RIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF 259 (654)
Q Consensus 196 ~eD-i~Lmk~lGv~~yRfSIsWs---------------RI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~ 259 (654)
.+. +.-+|+||++++=+.--.. .|.|. -|+ .+=.++||++|.++||++|+.+-
T Consensus 268 ~~~l~~ylk~LGv~~i~L~Pi~e~~~~~~~GY~~~~y~ai~~~------~Gt-----~~dfk~lV~~~H~~Gi~VilD~V 336 (726)
T PRK05402 268 ADQLIPYVKEMGFTHVELLPIAEHPFDGSWGYQPTGYYAPTSR------FGT-----PDDFRYFVDACHQAGIGVILDWV 336 (726)
T ss_pred HHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCcccCCCcCcc------cCC-----HHHHHHHHHHHHHCCCEEEEEEC
Confidence 345 3778999999987654211 11111 122 34478999999999999999853
Q ss_pred --cCCC-----------cccccc------cCC-------CCChhhHHHHHHHHHHHHHHhC
Q 006252 260 --HHSL-----------PAWAGE------YGG-------WKLEKTIDYFMDFTRLVVDSVS 294 (654)
Q Consensus 260 --HwDL-----------P~wL~~------~GG-------W~n~~~vd~Fa~YA~~vferfG 294 (654)
|+.- |.+... +.. +.++++.+.+.+=++.-+++||
T Consensus 337 ~NH~~~~~~~~~~~~~~~~y~~~~~~~~~~~~w~~~~~n~~~~~v~~~l~~~~~~W~~e~~ 397 (726)
T PRK05402 337 PAHFPKDAHGLARFDGTALYEHADPREGEHPDWGTLIFNYGRNEVRNFLVANALYWLEEFH 397 (726)
T ss_pred CCCCCCCccchhccCCCcceeccCCcCCccCCCCCccccCCCHHHHHHHHHHHHHHHHHhC
Confidence 5421 111110 112 3467888888888888887775
No 81
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=30.36 E-value=1.3e+02 Score=32.69 Aligned_cols=108 Identities=13% Similarity=0.099 Sum_probs=64.6
Q ss_pred HHHHHHHHhcCCCeEEe--cccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCc-----ccc-
Q 006252 196 DIELKLAKDTGVSVFRL--GIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLP-----AWA- 267 (654)
Q Consensus 196 ~eDi~Lmk~lGv~~yRf--SIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP-----~wL- 267 (654)
.+-++.+++.|+..==+ .+.|.. .. + .=++|++-.---..+|++|+++|++.++.++-+-.+ ..-
T Consensus 27 ~~~~~~~~~~~iP~d~i~lD~~~~~---~~---~-~f~~d~~~FPdp~~mi~~L~~~G~k~~~~~~P~v~~~~~~~~y~e 99 (339)
T cd06603 27 KEVDAGFDEHDIPYDVIWLDIEHTD---GK---R-YFTWDKKKFPDPEKMQEKLASKGRKLVTIVDPHIKRDDGYYVYKE 99 (339)
T ss_pred HHHHHHHHHcCCCceEEEEChHHhC---CC---C-ceEeCcccCCCHHHHHHHHHHCCCEEEEEecCceecCCCCHHHHH
Confidence 44466666666654433 334421 10 0 112333222223579999999999999888755332 110
Q ss_pred -c-------c-c------------C---CCCChhhHHHHHHHHHHHHHHhC-CccceEEEccCcceee
Q 006252 268 -G-------E-Y------------G---GWKLEKTIDYFMDFTRLVVDSVS-DIVDYWVTFNEPHVFC 310 (654)
Q Consensus 268 -~-------~-~------------G---GW~n~~~vd~Fa~YA~~vferfG-DrVk~WiT~NEPnv~~ 310 (654)
. . . + -++|++..++|.+..+.+....+ +-+-.|+=+|||.++.
T Consensus 100 ~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~~~g~~g~w~D~~Ep~~f~ 167 (339)
T cd06603 100 AKDKGYLVKNSDGGDFEGWCWPGSSSWPDFLNPEVRDWWASLFSYDKYKGSTENLYIWNDMNEPSVFN 167 (339)
T ss_pred HHHCCeEEECCCCCEEEEEECCCCcCCccCCChhHHHHHHHHHHHHhhcccCCCceEEeccCCccccC
Confidence 0 0 0 1 26789999999998887765432 2357899999998764
No 82
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=30.27 E-value=2.9e+02 Score=29.92 Aligned_cols=99 Identities=20% Similarity=0.377 Sum_probs=62.8
Q ss_pred CcHHHHHHHHhcCCCeEEecccc-------cccCCCCC-CCCCccccChhHHHHHHHHHHHHHHcCCeEEEEe-cc----
Q 006252 194 DPDIELKLAKDTGVSVFRLGIDW-------SRIMPAEP-VNGLKETVNFAALERYKWIINRVRSYGMKVMLTL-FH---- 260 (654)
Q Consensus 194 ~y~eDi~Lmk~lGv~~yRfSIsW-------sRI~P~~~-~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL-~H---- 260 (654)
..++-++.++++|+|++=+-+-+ |.++|... ..|..+. + .|.+....+|++++++||+...-+ +-
T Consensus 20 ~~~~~l~~l~~~~~N~V~~qVr~~gda~Y~S~~~p~s~~~~g~~~~-~-pg~DpL~~~I~eaHkrGlevHAW~~~~~~~~ 97 (311)
T PF02638_consen 20 QIDEMLDDLKSAGFNAVFVQVRPRGDALYPSDIEPWSGYLTGKQGK-D-PGFDPLEFMIEEAHKRGLEVHAWFRVGFNAP 97 (311)
T ss_pred HHHHHHHHHHHcCCCEEEEEEEeCcEEEecccccccccccCCCCCC-C-CCccHHHHHHHHHHHcCCEEEEEEEeecCCC
Confidence 34677899999999997666543 34444311 1111111 1 244556679999999999987544 11
Q ss_pred ------CCCccccc--------cc----C--CCCC---hhhHHHHHHHHHHHHHHhC
Q 006252 261 ------HSLPAWAG--------EY----G--GWKL---EKTIDYFMDFTRLVVDSVS 294 (654)
Q Consensus 261 ------wDLP~wL~--------~~----G--GW~n---~~~vd~Fa~YA~~vferfG 294 (654)
-..|.|+. .. | .|+| |++.++..+-++.++++|.
T Consensus 98 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i~~~v~Eiv~~Yd 154 (311)
T PF02638_consen 98 DVSHILKKHPEWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYIIDIVKEIVKNYD 154 (311)
T ss_pred chhhhhhcCchhheecCCCceeecccCCCCceEECCCCHHHHHHHHHHHHHHHhcCC
Confidence 12355532 12 2 2554 8888999999999999995
No 83
>PRK05799 coproporphyrinogen III oxidase; Provisional
Probab=30.06 E-value=1.2e+02 Score=33.10 Aligned_cols=93 Identities=17% Similarity=0.279 Sum_probs=52.8
Q ss_pred HHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccCh-hHHHHHHHHHHHHHHcCCeEE-EEeccCCCcccccccCCC
Q 006252 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNF-AALERYKWIINRVRSYGMKVM-LTLFHHSLPAWAGEYGGW 273 (654)
Q Consensus 196 ~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~-~Gl~~Yd~lId~L~~~GI~Pi-VTL~HwDLP~wL~~~GGW 273 (654)
+|.+++|+++|++.+-+++ .-+-++- + ..++. ...+-+.+.|+.+++.||..+ +.| =+++|.
T Consensus 99 ~e~l~~l~~~G~~rvsiGv--qS~~d~~-L----~~l~R~~~~~~~~~ai~~l~~~g~~~v~~dl-i~GlPg-------- 162 (374)
T PRK05799 99 EEKLKILKSMGVNRLSIGL--QAWQNSL-L----KYLGRIHTFEEFLENYKLARKLGFNNINVDL-MFGLPN-------- 162 (374)
T ss_pred HHHHHHHHHcCCCEEEEEC--ccCCHHH-H----HHcCCCCCHHHHHHHHHHHHHcCCCcEEEEe-ecCCCC--------
Confidence 6889999999999555554 3333321 0 01111 014456788999999999755 444 456662
Q ss_pred CChhhHHHHHHHHHHHHHHhCCccceEEEccCcc
Q 006252 274 KLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPH 307 (654)
Q Consensus 274 ~n~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPn 307 (654)
++.+.|.+-.+.+.+.=-+.|..+...-+|.
T Consensus 163 ---qt~e~~~~~l~~~~~l~~~~is~y~l~~~pg 193 (374)
T PRK05799 163 ---QTLEDWKETLEKVVELNPEHISCYSLIIEEG 193 (374)
T ss_pred ---CCHHHHHHHHHHHHhcCCCEEEEeccEecCC
Confidence 3455666666666543224444443333554
No 84
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes.
Probab=29.61 E-value=2.6e+02 Score=29.69 Aligned_cols=105 Identities=14% Similarity=0.166 Sum_probs=66.9
Q ss_pred cHHHHHHHHhcC--CCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcc---c---
Q 006252 195 PDIELKLAKDTG--VSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPA---W--- 266 (654)
Q Consensus 195 y~eDi~Lmk~lG--v~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~---w--- 266 (654)
..+-++.+++.| ++++=+.+.|.+-.-.+ +-.+|++-.---..+|++|+++|++.++.+.-+..+. .
T Consensus 26 v~~~~~~~~~~~iP~d~~~lD~~w~~~~~~~-----~f~~d~~~FPd~~~~i~~l~~~G~~~~~~~~P~i~~~~~~~~e~ 100 (308)
T cd06593 26 VNEFADGMRERNLPCDVIHLDCFWMKEFQWC-----DFEFDPDRFPDPEGMLSRLKEKGFKVCLWINPYIAQKSPLFKEA 100 (308)
T ss_pred HHHHHHHHHHcCCCeeEEEEecccccCCcce-----eeEECcccCCCHHHHHHHHHHCCCeEEEEecCCCCCCchhHHHH
Confidence 356688999999 56677778887432110 1245554444457899999999999888776332221 1
Q ss_pred -----cc-c-------------cCC---CCChhhHHHHHHHHHHHHHHhCCccc-eEEEccCcc
Q 006252 267 -----AG-E-------------YGG---WKLEKTIDYFMDFTRLVVDSVSDIVD-YWVTFNEPH 307 (654)
Q Consensus 267 -----L~-~-------------~GG---W~n~~~vd~Fa~YA~~vferfGDrVk-~WiT~NEPn 307 (654)
+- + .++ ++|++..++|.+..+.+.+ .| |+ +|+=+|||.
T Consensus 101 ~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~-~G--id~~~~D~~e~~ 161 (308)
T cd06593 101 AEKGYLVKKPDGSVWQWDLWQPGMGIIDFTNPDACKWYKDKLKPLLD-MG--VDCFKTDFGERI 161 (308)
T ss_pred HHCCeEEECCCCCeeeecccCCCcccccCCCHHHHHHHHHHHHHHHH-hC--CcEEecCCCCCC
Confidence 10 0 012 5789999999888876554 44 44 456688863
No 85
>TIGR00539 hemN_rel putative oxygen-independent coproporphyrinogen III oxidase. Experimentally determined examples of oxygen-independent coproporphyrinogen III oxidase, an enzyme that replaces HemF function under anaerobic conditions, belong to a family of proteins described by the model hemN. This model, hemN_rel, models a closely related protein, shorter at the amino end and lacking the region containing the motif PYRT[SC]YP found in members of the hemN family. Several species, including E. coli, Helicobacter pylori, Aquifex aeolicus, and Chlamydia trachomatis, have members of both this family and the E. coli hemN family. The member of this family from Bacillus subtilis was shown to complement an hemF/hemN double mutant of Salmonella typimurium and to prevent accumulation of coproporphyrinogen III under anaerobic conditions, but the exact role of this protein is still uncertain. It is found in a number of species that do not synthesize heme de novo.
Probab=29.21 E-value=1.4e+02 Score=32.60 Aligned_cols=77 Identities=16% Similarity=0.163 Sum_probs=47.5
Q ss_pred HHHHHHHHhcCCCeEEeccc-cc-ccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccccCCC
Q 006252 196 DIELKLAKDTGVSVFRLGID-WS-RIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGW 273 (654)
Q Consensus 196 ~eDi~Lmk~lGv~~yRfSIs-Ws-RI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~~GGW 273 (654)
++.++.|+++|++.+-++|+ -+ +++..- |. ..+ .+-+.+.|+.+++.|+.++-.-+-+++|.
T Consensus 100 ~e~l~~l~~~Gv~risiGvqS~~~~~l~~l---gR--~~~---~~~~~~ai~~l~~~G~~~v~~dli~GlPg-------- 163 (360)
T TIGR00539 100 AEWCKGLKGAGINRLSLGVQSFRDDKLLFL---GR--QHS---AKNIAPAIETALKSGIENISLDLMYGLPL-------- 163 (360)
T ss_pred HHHHHHHHHcCCCEEEEecccCChHHHHHh---CC--CCC---HHHHHHHHHHHHHcCCCeEEEeccCCCCC--------
Confidence 68899999999997666663 32 232210 11 111 45567899999999998654433456662
Q ss_pred CChhhHHHHHHHHHHHHH
Q 006252 274 KLEKTIDYFMDFTRLVVD 291 (654)
Q Consensus 274 ~n~~~vd~Fa~YA~~vfe 291 (654)
++.+.|.+-.+.+.+
T Consensus 164 ---qt~~~~~~~l~~~~~ 178 (360)
T TIGR00539 164 ---QTLNSLKEELKLAKE 178 (360)
T ss_pred ---CCHHHHHHHHHHHHc
Confidence 334555555555554
No 86
>PRK12313 glycogen branching enzyme; Provisional
Probab=28.97 E-value=2.7e+02 Score=33.09 Aligned_cols=92 Identities=13% Similarity=0.293 Sum_probs=57.4
Q ss_pred CCCcHHH-HHHHHhcCCCeEEeccc--------cc-------ccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEE
Q 006252 192 WSDPDIE-LKLAKDTGVSVFRLGID--------WS-------RIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVM 255 (654)
Q Consensus 192 y~~y~eD-i~Lmk~lGv~~yRfSIs--------Ws-------RI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~Pi 255 (654)
|...-+. ++-+|+||++++=+.-- |. .|.|. =|+ .+=+++||++|.++||++|
T Consensus 169 ~~~~~~~ll~yl~~LGv~~i~L~Pi~~~~~~~~~GY~~~~y~~i~~~------~Gt-----~~d~k~lv~~~H~~Gi~Vi 237 (633)
T PRK12313 169 YRELADELIPYVKEMGYTHVEFMPLMEHPLDGSWGYQLTGYFAPTSR------YGT-----PEDFMYLVDALHQNGIGVI 237 (633)
T ss_pred HHHHHHHHHHHHHHcCCCEEEeCchhcCCCCCCCCCCCcCcCcCCCC------CCC-----HHHHHHHHHHHHHCCCEEE
Confidence 4444456 48999999999875442 21 11111 122 3447899999999999999
Q ss_pred EEec--cCCCcc----ccc--------c-----cCCC-------CChhhHHHHHHHHHHHHHHhC
Q 006252 256 LTLF--HHSLPA----WAG--------E-----YGGW-------KLEKTIDYFMDFTRLVVDSVS 294 (654)
Q Consensus 256 VTL~--HwDLP~----wL~--------~-----~GGW-------~n~~~vd~Fa~YA~~vferfG 294 (654)
+.+- |..-.. ++. + ..+| .|+++.+.+.+=++.-+++||
T Consensus 238 lD~V~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~n~~~~~vr~~l~~~~~~W~~~~~ 302 (633)
T PRK12313 238 LDWVPGHFPKDDDGLAYFDGTPLYEYQDPRRAENPDWGALNFDLGKNEVRSFLISSALFWLDEYH 302 (633)
T ss_pred EEECCCCCCCCcccccccCCCcceeecCCCCCcCCCCCCcccCCCCHHHHHHHHHHHHHHHHHhC
Confidence 9854 542110 110 0 0123 367888888888888888775
No 87
>PLN02746 hydroxymethylglutaryl-CoA lyase
Probab=28.40 E-value=1.6e+02 Score=32.69 Aligned_cols=87 Identities=11% Similarity=0.006 Sum_probs=62.9
Q ss_pred cHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEecc-CCCcccccccCCC
Q 006252 195 PDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFH-HSLPAWAGEYGGW 273 (654)
Q Consensus 195 y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~H-wDLP~wL~~~GGW 273 (654)
-.+|++.+.+.|++.+.+.++=|..+-... -+.--++.++.+.++|+..+++|++..+++-. |..|. .|
T Consensus 123 n~~die~A~~~g~~~v~i~~s~Sd~h~~~n----~~~t~~e~l~~~~~~v~~Ak~~Gl~v~~~is~~fg~p~-----~~- 192 (347)
T PLN02746 123 NLKGFEAAIAAGAKEVAVFASASESFSKSN----INCSIEESLVRYREVALAAKKHSIPVRGYVSCVVGCPI-----EG- 192 (347)
T ss_pred CHHHHHHHHHcCcCEEEEEEecCHHHHHHH----hCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEeeecCCc-----cC-
Confidence 489999999999999999987776644321 12223567888999999999999999877753 44442 22
Q ss_pred CChhhHHHHHHHHHHHHHHhC
Q 006252 274 KLEKTIDYFMDFTRLVVDSVS 294 (654)
Q Consensus 274 ~n~~~vd~Fa~YA~~vferfG 294 (654)
+-.++.+.++++.+.+ .|
T Consensus 193 --r~~~~~l~~~~~~~~~-~G 210 (347)
T PLN02746 193 --PVPPSKVAYVAKELYD-MG 210 (347)
T ss_pred --CCCHHHHHHHHHHHHH-cC
Confidence 2346778888888765 44
No 88
>PRK12331 oxaloacetate decarboxylase; Provisional
Probab=27.93 E-value=2.2e+02 Score=32.59 Aligned_cols=69 Identities=14% Similarity=0.306 Sum_probs=52.3
Q ss_pred HHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccccCCCCC
Q 006252 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKL 275 (654)
Q Consensus 196 ~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~~GGW~n 275 (654)
++||+.+.+.|++.+|+.++-+.+. | ....|+..+++|+.+.+++..-+-|
T Consensus 99 ~~~v~~A~~~Gvd~irif~~lnd~~------------n------~~~~v~~ak~~G~~v~~~i~~t~~p----------- 149 (448)
T PRK12331 99 ESFVQKSVENGIDIIRIFDALNDVR------------N------LETAVKATKKAGGHAQVAISYTTSP----------- 149 (448)
T ss_pred HHHHHHHHHCCCCEEEEEEecCcHH------------H------HHHHHHHHHHcCCeEEEEEEeecCC-----------
Confidence 5678999999999999998665441 1 4458999999999998888765544
Q ss_pred hhhHHHHHHHHHHHHHHhC
Q 006252 276 EKTIDYFMDFTRLVVDSVS 294 (654)
Q Consensus 276 ~~~vd~Fa~YA~~vferfG 294 (654)
....+++.+.|+.+.+ .|
T Consensus 150 ~~~~~~~~~~a~~l~~-~G 167 (448)
T PRK12331 150 VHTIDYFVKLAKEMQE-MG 167 (448)
T ss_pred CCCHHHHHHHHHHHHH-cC
Confidence 2457888888888754 44
No 89
>PLN02389 biotin synthase
Probab=27.78 E-value=1.5e+02 Score=33.11 Aligned_cols=57 Identities=19% Similarity=0.193 Sum_probs=41.3
Q ss_pred CcHHHHHHHHhcCCCeEEecccccc-cCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEe
Q 006252 194 DPDIELKLAKDTGVSVFRLGIDWSR-IMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTL 258 (654)
Q Consensus 194 ~y~eDi~Lmk~lGv~~yRfSIsWsR-I~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL 258 (654)
..+|.++.||+.|++.|-.+++=++ +.|.- ...- ..+.+-+.|+.+++.||+...++
T Consensus 176 l~~E~l~~LkeAGld~~~~~LeTs~~~y~~i-----~~~~---s~e~rl~ti~~a~~~Gi~v~sg~ 233 (379)
T PLN02389 176 LEKEQAAQLKEAGLTAYNHNLDTSREYYPNV-----ITTR---SYDDRLETLEAVREAGISVCSGG 233 (379)
T ss_pred CCHHHHHHHHHcCCCEEEeeecCChHHhCCc-----CCCC---CHHHHHHHHHHHHHcCCeEeEEE
Confidence 4589999999999999999886322 44431 0111 24566789999999999987775
No 90
>PF04646 DUF604: Protein of unknown function, DUF604; InterPro: IPR006740 This family includes a conserved region found in several uncharacterised plant proteins.
Probab=27.32 E-value=42 Score=35.57 Aligned_cols=77 Identities=5% Similarity=-0.073 Sum_probs=44.3
Q ss_pred HHHHHHHHcCCeEEEEeccCCCcccccccCCCCChhhHHHHHHHHHHHHHHhCCccceEEEccCcceeeeccccCCCCC
Q 006252 242 WIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCMLTYCAGTWP 320 (654)
Q Consensus 242 ~lId~L~~~GI~PiVTL~HwDLP~wL~~~GGW~n~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPnv~~~~GY~~G~~p 320 (654)
+..--+-++.+.|+|+|||||.=..+. -+....+.++++.+=+++--.++-.+---|-.-....+.+-+||..-.++
T Consensus 72 d~~G~~~a~~~~pl~SlHH~~~~~Pif--P~~~~~~al~~L~~a~~~d~~~~lqqsicyd~~~~wsvsVSwGYsVqvy~ 148 (255)
T PF04646_consen 72 DPSGFLEAHPLAPLVSLHHWDSVDPIF--PNMSRLQALRHLLKAAKVDPARILQQSICYDRRRNWSVSVSWGYSVQVYR 148 (255)
T ss_pred CcceeeecCCCCceeeeeehhhccccC--CCCCHHHHHHHHHHHHhhChHhhhheeeeccCceEEEEEEEccEEEEEEC
Confidence 333344456799999999999644433 35566777777777555443343222112222223345566899876654
No 91
>TIGR01210 conserved hypothetical protein TIGR01210. This family of exclusively archaeal proteins has no characterized close homologs. Several rounds of PSI-BLAST with a stringent cutoff of 1e-8 shows apparent similarity of the central region of this family to the central regions of the oxygen-independent coproporphyrinogen III dehydrogenase HemN and to other enzymes.
Probab=26.72 E-value=2.5e+02 Score=30.34 Aligned_cols=115 Identities=19% Similarity=0.262 Sum_probs=69.5
Q ss_pred cccCCCCcHHHHHHHHhcCCC-eEEeccc-c-cccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCc
Q 006252 188 RLRFWSDPDIELKLAKDTGVS-VFRLGID-W-SRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLP 264 (654)
Q Consensus 188 a~~~y~~y~eDi~Lmk~lGv~-~yRfSIs-W-sRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP 264 (654)
+.+.-+ +|.+++|+++|++ .+=++++ - .+++-.. ..-..+ .+-+.+.++.++++||...+.+. +.+|
T Consensus 111 rpd~i~--~e~L~~l~~aG~~~~v~iG~ES~~d~~L~~~----inKg~t---~~~~~~ai~~~~~~Gi~v~~~~i-~G~P 180 (313)
T TIGR01210 111 RPEFID--EEKLEELRKIGVNVEVAVGLETANDRIREKS----INKGST---FEDFIRAAELARKYGAGVKAYLL-FKPP 180 (313)
T ss_pred CCCcCC--HHHHHHHHHcCCCEEEEEecCcCCHHHHHHh----hCCCCC---HHHHHHHHHHHHHcCCcEEEEEE-ecCC
Confidence 334444 7899999999988 4666662 1 1222000 000122 45677899999999999666653 3455
Q ss_pred ccccccCCCCChhhHHHHHHHHHHHHHHhCCccceEEEccCcceeeeccccCCCCC
Q 006252 265 AWAGEYGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCMLTYCAGTWP 320 (654)
Q Consensus 265 ~wL~~~GGW~n~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPnv~~~~GY~~G~~p 320 (654)
+..-.+.++.+.+.++.+.. +++.|....+.=+|......-|..|.+.
T Consensus 181 -------~~se~ea~ed~~~ti~~~~~-l~~~vs~~~l~v~~gT~l~~~~~~G~~~ 228 (313)
T TIGR01210 181 -------FLSEKEAIADMISSIRKCIP-VTDTVSINPTNVQKGTLVEFLWNRGLYR 228 (313)
T ss_pred -------CCChhhhHHHHHHHHHHHHh-cCCcEEEECCEEeCCCHHHHHHHcCCCC
Confidence 22224678888888888765 4577777666555554333335556554
No 92
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism]
Probab=26.60 E-value=1.3e+02 Score=36.29 Aligned_cols=59 Identities=19% Similarity=0.316 Sum_probs=39.9
Q ss_pred HHHHHhcCCCeEEe----cccccccCCCCC--------------CCCCccccChh---HHHHHHHHHHHHHHcCCeEEEE
Q 006252 199 LKLAKDTGVSVFRL----GIDWSRIMPAEP--------------VNGLKETVNFA---ALERYKWIINRVRSYGMKVMLT 257 (654)
Q Consensus 199 i~Lmk~lGv~~yRf----SIsWsRI~P~~~--------------~~G~~g~vN~~---Gl~~Yd~lId~L~~~GI~PiVT 257 (654)
|+-+|+|||+++.+ ++.+-+...... .+| ....|++ .+.=+++||++|.++||++|+.
T Consensus 206 i~yLk~LGvtaVeLLPV~~~~~~~~l~~~gl~n~WGYdP~~fFAp~~-~Yss~p~p~~~i~EfK~mV~~lHkaGI~VILD 284 (697)
T COG1523 206 IDYLKDLGVTAVELLPVFDFYDEPHLDKSGLNNNWGYDPLNFFAPEG-RYASNPEPATRIKEFKDMVKALHKAGIEVILD 284 (697)
T ss_pred HHHHHHhCCceEEEecceEEeccccccccccccccCCCcccccCCCc-cccCCCCcchHHHHHHHHHHHHHHcCCEEEEE
Confidence 99999999999985 344444433210 000 1223332 4666899999999999999997
Q ss_pred e
Q 006252 258 L 258 (654)
Q Consensus 258 L 258 (654)
+
T Consensus 285 V 285 (697)
T COG1523 285 V 285 (697)
T ss_pred E
Confidence 5
No 93
>COG3589 Uncharacterized conserved protein [Function unknown]
Probab=26.54 E-value=1.2e+02 Score=33.59 Aligned_cols=70 Identities=14% Similarity=0.264 Sum_probs=49.7
Q ss_pred HHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccccCCCCChh
Q 006252 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKLEK 277 (654)
Q Consensus 198 Di~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~~GGW~n~~ 277 (654)
-|++|.+.|++-+=+|+ +.|++ .....+..+.+|++.+.+.|+++||.. -|+-|.+ =|| +.+
T Consensus 21 Yi~~~~~~Gf~~IFtsl----~~~~~--------~~~~~~~~~~ell~~Anklg~~vivDv----nPsil~~-l~~-S~~ 82 (360)
T COG3589 21 YIDRMHKYGFKRIFTSL----LIPEE--------DAELYFHRFKELLKEANKLGLRVIVDV----NPSILKE-LNI-SLD 82 (360)
T ss_pred HHHHHHHcCccceeeec----ccCCc--------hHHHHHHHHHHHHHHHHhcCcEEEEEc----CHHHHhh-cCC-ChH
Confidence 37889999988776665 34432 334578899999999999999999999 4887764 233 234
Q ss_pred hHHHHHHH
Q 006252 278 TIDYFMDF 285 (654)
Q Consensus 278 ~vd~Fa~Y 285 (654)
.++.|.+.
T Consensus 83 ~l~~f~e~ 90 (360)
T COG3589 83 NLSRFQEL 90 (360)
T ss_pred HHHHHHHh
Confidence 45555554
No 94
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of
Probab=26.33 E-value=2.2e+02 Score=31.11 Aligned_cols=105 Identities=15% Similarity=0.201 Sum_probs=65.2
Q ss_pred HHHHHHHHhcCCCe--EEecccccccCCCCCCCCCccccChhHHHHH--HHHHHHHHHcCCeEEEEeccCCCcc-----c
Q 006252 196 DIELKLAKDTGVSV--FRLGIDWSRIMPAEPVNGLKETVNFAALERY--KWIINRVRSYGMKVMLTLFHHSLPA-----W 266 (654)
Q Consensus 196 ~eDi~Lmk~lGv~~--yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Y--d~lId~L~~~GI~PiVTL~HwDLP~-----w 266 (654)
.+-++.+++.|+.. +=+.+.|..-. + +-++|++-.--- .++|++|+++|++.++.+.-+-.+. .
T Consensus 27 ~~~~~~~r~~~iP~d~i~lD~~~~~~~--~-----~f~~d~~~FPdp~~~~mi~~L~~~G~k~~~~i~P~v~~~~~~~~~ 99 (339)
T cd06602 27 KEVVENMRAAGIPLDVQWNDIDYMDRR--R-----DFTLDPVRFPGLKMPEFVDELHANGQHYVPILDPAISANEPTGSY 99 (339)
T ss_pred HHHHHHHHHhCCCcceEEECcccccCc--c-----ceecccccCCCccHHHHHHHHHHCCCEEEEEEeCccccCcCCCCC
Confidence 45567777777654 44555664321 1 122333222222 6899999999999999887554432 0
Q ss_pred --cc---c--------------------cC---CCCChhhHHHHHHHHHHHHHHhCCccceEEEccCcce
Q 006252 267 --AG---E--------------------YG---GWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHV 308 (654)
Q Consensus 267 --L~---~--------------------~G---GW~n~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPnv 308 (654)
++ + .+ -|+|++..++|.+.-+.++..+|= --+|+=+|||..
T Consensus 100 ~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gv-dg~w~D~~Ep~~ 168 (339)
T cd06602 100 PPYDRGLEMDVFIKNDDGSPYIGKVWPGYTVFPDFLNPNTQEWWTDEIKDFHDQVPF-DGLWIDMNEPSN 168 (339)
T ss_pred HHHHHHHHCCeEEECCCCCEEEEEeCCCCCcCcCCCCHHHHHHHHHHHHHHHhcCCC-cEEEecCCCCch
Confidence 00 0 11 267899999998877776666553 356888999964
No 95
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A ....
Probab=25.97 E-value=5.4e+02 Score=29.02 Aligned_cols=99 Identities=18% Similarity=0.186 Sum_probs=61.1
Q ss_pred HHHHHHHHhcCCCeEEecccccccCCCCC-CCCCccccCh----hHHHHHHHHHHHHHHcCCeEEEEec----------c
Q 006252 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEP-VNGLKETVNF----AALERYKWIINRVRSYGMKVMLTLF----------H 260 (654)
Q Consensus 196 ~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~-~~G~~g~vN~----~Gl~~Yd~lId~L~~~GI~PiVTL~----------H 260 (654)
.+-++.++++|++.|=+.--|..---... --| +-.+|+ .|+ ..|++.+++.||++=+=+- .
T Consensus 61 ~~~a~~~~~~G~e~fviDDGW~~~r~~d~~~~G-dW~~~~~kFP~Gl---~~l~~~i~~~Gmk~GlW~ePe~v~~~S~l~ 136 (394)
T PF02065_consen 61 LELADAAAELGYEYFVIDDGWFGGRDDDNAGLG-DWEPDPKKFPNGL---KPLADYIHSLGMKFGLWFEPEMVSPDSDLY 136 (394)
T ss_dssp HHHHHHHHHHT-SEEEE-SSSBCTESTTTSTTS-BECBBTTTSTTHH---HHHHHHHHHTT-EEEEEEETTEEESSSCHC
T ss_pred HHHHHHHHHhCCEEEEEcCccccccCCCcccCC-ceeEChhhhCCcH---HHHHHHHHHCCCeEEEEeccccccchhHHH
Confidence 44578999999999999989965311100 001 123332 354 4799999999999966330 1
Q ss_pred CCCcccccccC------C-------CCChhhHHHHHHHHHHHHHHhC-Cccc
Q 006252 261 HSLPAWAGEYG------G-------WKLEKTIDYFMDFTRLVVDSVS-DIVD 298 (654)
Q Consensus 261 wDLP~wL~~~G------G-------W~n~~~vd~Fa~YA~~vferfG-DrVk 298 (654)
-..|.|+...+ | ..+|++.++..+-...+++.+| |.+|
T Consensus 137 ~~hPdw~l~~~~~~~~~~r~~~vLD~~~pev~~~l~~~i~~ll~~~gidYiK 188 (394)
T PF02065_consen 137 REHPDWVLRDPGRPPTLGRNQYVLDLSNPEVRDYLFEVIDRLLREWGIDYIK 188 (394)
T ss_dssp CSSBGGBTCCTTSE-ECBTTBEEB-TTSHHHHHHHHHHHHHHHHHTT-SEEE
T ss_pred HhCccceeecCCCCCcCcccceEEcCCCHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 14588863211 1 3478899999888888888887 4344
No 96
>TIGR00433 bioB biotin synthetase. Catalyzes the last step of the biotin biosynthesis pathway.
Probab=25.73 E-value=1.1e+02 Score=32.06 Aligned_cols=55 Identities=18% Similarity=0.169 Sum_probs=39.0
Q ss_pred HHHHHHHHhcCCCeEEeccccc-ccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEe
Q 006252 196 DIELKLAKDTGVSVFRLGIDWS-RIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTL 258 (654)
Q Consensus 196 ~eDi~Lmk~lGv~~yRfSIsWs-RI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL 258 (654)
+|.++.||++|++.+-++++-+ .+.+.- .+. ...+.+.+.++.++++||...+++
T Consensus 123 ~e~l~~Lk~aG~~~v~i~~E~~~~~~~~i-----~~~---~s~~~~~~ai~~l~~~Gi~v~~~~ 178 (296)
T TIGR00433 123 PEQAKRLKDAGLDYYNHNLDTSQEFYSNI-----IST---HTYDDRVDTLENAKKAGLKVCSGG 178 (296)
T ss_pred HHHHHHHHHcCCCEEEEcccCCHHHHhhc-----cCC---CCHHHHHHHHHHHHHcCCEEEEeE
Confidence 8999999999999999999822 123221 111 124567789999999999865543
No 97
>TIGR02090 LEU1_arch isopropylmalate/citramalate/homocitrate synthases. Methanogens, then should and aparrently do contain all three of these enzymes. Unfortunately, phylogenetic trees do not resolve into three unambiguous clades, making assignment of function to particular genes problematic. Other archaea which lack a threonine dehydratase (mainly Euryarchaeota) should contain both a CimA and a LeuA gene. This is true of, for example, archaeoglobus fulgidis, but not for the Pyrococci which have none in this clade, but one in TIGR00973 and one in TIGRT00977 which may fulfill these roles. Other species which have only one hit to this model and lack threonine dehydratase are very likely LeuA enzymes.
Probab=25.68 E-value=1.7e+02 Score=32.36 Aligned_cols=84 Identities=15% Similarity=0.118 Sum_probs=58.0
Q ss_pred CCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCccccccc
Q 006252 191 FWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEY 270 (654)
Q Consensus 191 ~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~~ 270 (654)
|-.-.++||+.+.+.|++.+|+.++-|.+.-... -+.--++.++-..+.|..+++.|++..+++-.
T Consensus 69 ~~r~~~~di~~a~~~g~~~i~i~~~~Sd~~~~~~----~~~~~~~~~~~~~~~i~~ak~~G~~v~~~~ed---------- 134 (363)
T TIGR02090 69 LARALKKDIDKAIDCGVDSIHTFIATSPIHLKYK----LKKSRDEVLEKAVEAVEYAKEHGLIVEFSAED---------- 134 (363)
T ss_pred EcccCHHHHHHHHHcCcCEEEEEEcCCHHHHHHH----hCCCHHHHHHHHHHHHHHHHHcCCEEEEEEee----------
Confidence 3333589999999999999999988776643210 01112445777889999999999998877632
Q ss_pred CCCCChhhHHHHHHHHHHHHH
Q 006252 271 GGWKLEKTIDYFMDFTRLVVD 291 (654)
Q Consensus 271 GGW~n~~~vd~Fa~YA~~vfe 291 (654)
.+ +...+.+.++++.+.+
T Consensus 135 a~---r~~~~~l~~~~~~~~~ 152 (363)
T TIGR02090 135 AT---RTDIDFLIKVFKRAEE 152 (363)
T ss_pred cC---CCCHHHHHHHHHHHHh
Confidence 11 3346677777776543
No 98
>cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
Probab=25.01 E-value=2.2e+02 Score=30.16 Aligned_cols=95 Identities=7% Similarity=0.078 Sum_probs=60.5
Q ss_pred cccCCCCcHHH-HHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCC---
Q 006252 188 RLRFWSDPDIE-LKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSL--- 263 (654)
Q Consensus 188 a~~~y~~y~eD-i~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDL--- 263 (654)
...||..++++ .+.+++.+-..=-++..|-.|-|.+.+ .+.. ..++++.++++|++.++++.-|+-
T Consensus 4 ~~g~~~~~~~~~~~~~~~~~~~lt~v~p~w~~~~~~g~~---~~~~-------~~~~~~~a~~~~~kv~~~i~~~~~~~~ 73 (313)
T cd02874 4 VLGYYTPRNGSDYESLRANAPYLTYIAPFWYGVDADGTL---TGLP-------DERLIEAAKRRGVKPLLVITNLTNGNF 73 (313)
T ss_pred EEEEEecCCCchHHHHHHhcCCCCEEEEEEEEEcCCCCC---CCCC-------CHHHHHHHHHCCCeEEEEEecCCCCCC
Confidence 45677766665 788888888888889999999886532 2222 247899999999999999976541
Q ss_pred -cccccccCCCCChhhHHHHHHHHHHHHHHhC
Q 006252 264 -PAWAGEYGGWKLEKTIDYFMDFTRLVVDSVS 294 (654)
Q Consensus 264 -P~wL~~~GGW~n~~~vd~Fa~YA~~vferfG 294 (654)
+..+. .--.+++..+.|++=.-..++++|
T Consensus 74 ~~~~~~--~~l~~~~~r~~fi~~iv~~l~~~~ 103 (313)
T cd02874 74 DSELAH--AVLSNPEARQRLINNILALAKKYG 103 (313)
T ss_pred CHHHHH--HHhcCHHHHHHHHHHHHHHHHHhC
Confidence 00000 001245555566555555555553
No 99
>cd07941 DRE_TIM_LeuA3 Desulfobacterium autotrophicum LeuA3 and related proteins, N-terminal catalytic TIM barrel domain. Desulfobacterium autotrophicum LeuA3 is sequence-similar to alpha-isopropylmalate synthase (LeuA) but its exact function is unknown. Members of this family have an N-terminal TIM barrel domain that belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of in
Probab=24.87 E-value=2e+02 Score=30.40 Aligned_cols=82 Identities=16% Similarity=0.120 Sum_probs=55.7
Q ss_pred HHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccccCCCCC
Q 006252 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKL 275 (654)
Q Consensus 196 ~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~~GGW~n 275 (654)
+.+++++++.|++.+|+.++=|-+.-... -+.--++.++-..++|+.+++.|+++.++.-+| .+ +.
T Consensus 81 ~~~~~~a~~~g~~~i~i~~~~sd~~~~~~----~~~~~~~~~~~~~~~i~~ak~~G~~v~~~~~~~------~d-~~--- 146 (273)
T cd07941 81 DPNLQALLEAGTPVVTIFGKSWDLHVTEA----LGTTLEENLAMIRDSVAYLKSHGREVIFDAEHF------FD-GY--- 146 (273)
T ss_pred hHHHHHHHhCCCCEEEEEEcCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHcCCeEEEeEEec------cc-cC---
Confidence 46899999999999999886554422110 011224567888899999999999998877665 11 11
Q ss_pred hhhHHHHHHHHHHHHH
Q 006252 276 EKTIDYFMDFTRLVVD 291 (654)
Q Consensus 276 ~~~vd~Fa~YA~~vfe 291 (654)
+...+.+.++++.+.+
T Consensus 147 ~~~~~~~~~~~~~~~~ 162 (273)
T cd07941 147 KANPEYALATLKAAAE 162 (273)
T ss_pred CCCHHHHHHHHHHHHh
Confidence 2235667777777754
No 100
>TIGR01232 lacD tagatose 1,6-diphosphate aldolase. This family consists of Gram-positive proteins. Tagatose 1,6-diphosphate aldolase is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation.
Probab=24.63 E-value=3.1e+02 Score=30.27 Aligned_cols=60 Identities=12% Similarity=0.089 Sum_probs=50.5
Q ss_pred HHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcc
Q 006252 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPA 265 (654)
Q Consensus 198 Di~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~ 265 (654)
+++.+|++|.++..|=+-|.-=.| ..+|..-.+|..++..+|++.||--++=+.-+|.+.
T Consensus 111 s~~rike~GadavK~Llyy~pD~~--------~ein~~k~a~vervg~ec~a~dipf~lE~ltYd~~~ 170 (325)
T TIGR01232 111 SAKRLKEQGANAVKFLLYYDVDDA--------EEINIQKKAYIERIGSECVAEDIPFFLEVLTYDDNI 170 (325)
T ss_pred cHHHHHHhCCCeEEEEEEeCCCCC--------hHHHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCCC
Confidence 489999999999999887743222 468999999999999999999999999888776654
No 101
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=24.59 E-value=1e+02 Score=35.17 Aligned_cols=72 Identities=18% Similarity=0.243 Sum_probs=45.3
Q ss_pred cCCCCcHHHHHHHHhcCCCeEEeccccccc--------CCCCCCC-C---CccccChh--HHHHHHHHHHHHHHcCCeEE
Q 006252 190 RFWSDPDIELKLAKDTGVSVFRLGIDWSRI--------MPAEPVN-G---LKETVNFA--ALERYKWIINRVRSYGMKVM 255 (654)
Q Consensus 190 ~~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI--------~P~~~~~-G---~~g~vN~~--Gl~~Yd~lId~L~~~GI~Pi 255 (654)
+.|....+-++-+++||++++=++-...-. -|..-.+ + ..|.+|+. ..+=+++||++|.++||++|
T Consensus 19 ~~~~~I~~kldyl~~LGvtaIwl~P~~~~~~~~~~hgY~~~D~~~~~~~~~~~~id~~fGt~~dl~~Li~~~H~~Gi~vi 98 (479)
T PRK09441 19 KLWNRLAERAPELAEAGITAVWLPPAYKGTSGGYDVGYGVYDLFDLGEFDQKGTVRTKYGTKEELLNAIDALHENGIKVY 98 (479)
T ss_pred cHHHHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCCeecccccccccccCCcCcCcCCHHHHHHHHHHHHHCCCEEE
Confidence 456666778999999999999887654322 1110000 0 00122222 24447899999999999999
Q ss_pred EEe--ccC
Q 006252 256 LTL--FHH 261 (654)
Q Consensus 256 VTL--~Hw 261 (654)
+.+ .|-
T Consensus 99 ~D~V~NH~ 106 (479)
T PRK09441 99 ADVVLNHK 106 (479)
T ss_pred EEECcccc
Confidence 985 464
No 102
>cd07938 DRE_TIM_HMGL 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain. 3-hydroxy-3-methylglutaryl-CoA lyase (HMGL) catalyzes the cleavage of HMG-CoA to acetyl-CoA and acetoacetate, one of the terminal steps in ketone body generation and leucine degradation, and is a key enzyme in the pathway that supplies metabolic fuel to extrahepatic tissues. Mutations in HMGL cause a human autosomal recessive disorder called primary metabolic aciduria that affects ketogenesis and leucine catabolism and can be fatal due to an inability to tolerate hypoglycemia. HMGL has a TIM barrel domain with a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. The cleavage of HMG-CoA requires the presence of a divalent cation like Mg2+ or Mn2+, and the reaction is thought to involve general acid/base catalysis. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropy
Probab=24.58 E-value=2.2e+02 Score=30.13 Aligned_cols=87 Identities=15% Similarity=0.141 Sum_probs=61.4
Q ss_pred cHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEec-cCCCcccccccCCC
Q 006252 195 PDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF-HHSLPAWAGEYGGW 273 (654)
Q Consensus 195 y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~-HwDLP~wL~~~GGW 273 (654)
-.+|++.+.+.|++.+++.++=|.+.-... -+.--++.++...+.+..++++|+++.+++- -|+.|. +|
T Consensus 75 ~~~dv~~A~~~g~~~i~i~~~~Sd~~~~~~----~~~s~~~~~~~~~~~v~~ak~~G~~v~~~i~~~f~~~~-----~~- 144 (274)
T cd07938 75 NLRGAERALAAGVDEVAVFVSASETFSQKN----INCSIAESLERFEPVAELAKAAGLRVRGYVSTAFGCPY-----EG- 144 (274)
T ss_pred CHHHHHHHHHcCcCEEEEEEecCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEeEecCCC-----CC-
Confidence 378999999999999999987765432210 0111255678889999999999999998876 355541 22
Q ss_pred CChhhHHHHHHHHHHHHHHhC
Q 006252 274 KLEKTIDYFMDFTRLVVDSVS 294 (654)
Q Consensus 274 ~n~~~vd~Fa~YA~~vferfG 294 (654)
+-..+.+.++++.+.+ .|
T Consensus 145 --~~~~~~~~~~~~~~~~-~G 162 (274)
T cd07938 145 --EVPPERVAEVAERLLD-LG 162 (274)
T ss_pred --CCCHHHHHHHHHHHHH-cC
Confidence 2346788888888764 44
No 103
>TIGR02660 nifV_homocitr homocitrate synthase NifV. This family consists of the NifV clade of homocitrate synthases, most of which are found in operons for nitrogen fixation. Members are closely homologous to enzymes that include 2-isopropylmalate synthase, (R)-citramalate synthase, and homocitrate synthases associated with other processes. The homocitrate made by this enzyme becomes a part of the iron-molybdenum cofactor of nitrogenase.
Probab=24.06 E-value=1.8e+02 Score=32.10 Aligned_cols=82 Identities=16% Similarity=0.233 Sum_probs=57.3
Q ss_pred cHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccccCCCC
Q 006252 195 PDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWK 274 (654)
Q Consensus 195 y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~~GGW~ 274 (654)
-.+||+.+.+.|++.+|+.++-|.+.-...+ +.--.+.++-..+.|..++++|+++.+++- .++
T Consensus 74 ~~~di~~a~~~g~~~i~i~~~~Sd~~~~~~~----~~s~~e~l~~~~~~i~~ak~~g~~v~~~~e----------d~~-- 137 (365)
T TIGR02660 74 RDADIEAAARCGVDAVHISIPVSDLQIEAKL----RKDRAWVLERLARLVSFARDRGLFVSVGGE----------DAS-- 137 (365)
T ss_pred CHHHHHHHHcCCcCEEEEEEccCHHHHHHHh----CcCHHHHHHHHHHHHHHHHhCCCEEEEeec----------CCC--
Confidence 3889999999999999999988765332100 111245678888999999999999776542 122
Q ss_pred ChhhHHHHHHHHHHHHHHhC
Q 006252 275 LEKTIDYFMDFTRLVVDSVS 294 (654)
Q Consensus 275 n~~~vd~Fa~YA~~vferfG 294 (654)
+...+.+.++++.+.+ +|
T Consensus 138 -r~~~~~l~~~~~~~~~-~G 155 (365)
T TIGR02660 138 -RADPDFLVELAEVAAE-AG 155 (365)
T ss_pred -CCCHHHHHHHHHHHHH-cC
Confidence 2336777888887654 55
No 104
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]
Probab=23.06 E-value=3.2e+02 Score=33.64 Aligned_cols=105 Identities=18% Similarity=0.336 Sum_probs=70.1
Q ss_pred HHHHHHHHhcCCC--eEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEec---cCCCc------
Q 006252 196 DIELKLAKDTGVS--VFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF---HHSLP------ 264 (654)
Q Consensus 196 ~eDi~Lmk~lGv~--~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~---HwDLP------ 264 (654)
++-++-++++|+. ..=..|+|-.=.. +=++|+.+.-...++++.|.++|++-++++. +=+..
T Consensus 314 ~dvv~~~~~agiPld~~~~DiDyMd~yk-------DFTvd~~~fp~~~~fv~~Lh~~G~kyvliidP~is~~~~y~~y~~ 386 (805)
T KOG1065|consen 314 RDVVENYRAAGIPLDVIVIDIDYMDGYK-------DFTVDKVWFPDLKDFVDDLHARGFKYVLIIDPFISTNSSYGPYDR 386 (805)
T ss_pred HHHHHHHHHcCCCcceeeeehhhhhccc-------ceeeccccCcchHHHHHHHHhCCCeEEEEeCCccccCccchhhhh
Confidence 3446778888877 6666666632222 2367777767788999999999999999987 32222
Q ss_pred -----ccccc-----------cCC------CCChhhHHHHHHHHHHHHHHhCCccc---eEEEccCcceeee
Q 006252 265 -----AWAGE-----------YGG------WKLEKTIDYFMDFTRLVVDSVSDIVD---YWVTFNEPHVFCM 311 (654)
Q Consensus 265 -----~wL~~-----------~GG------W~n~~~vd~Fa~YA~~vferfGDrVk---~WiT~NEPnv~~~ 311 (654)
.+..+ .-| ++|+.++.++.+ .+++|.+.|. +|+-+|||..++.
T Consensus 387 g~~~~v~I~~~~g~~~~lg~vwP~~~~fpDftnp~~~~Ww~~----~~~~fh~~vp~dg~wiDmnE~snf~~ 454 (805)
T KOG1065|consen 387 GVAKDVLIKNREGSPKMLGEVWPGSTAFPDFTNPAVVEWWLD----ELKRFHDEVPFDGFWIDMNEPSNFPS 454 (805)
T ss_pred hhhhceeeecccCchhhhcccCCCcccccccCCchHHHHHHH----HHHhhcccCCccceEEECCCcccCCC
Confidence 01111 012 677777777654 4557888886 7999999986653
No 105
>PF03659 Glyco_hydro_71: Glycosyl hydrolase family 71 ; InterPro: IPR005197 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,3-glucanases belonging to glycoside hydrolase family 71 (GH71 from CAZY).
Probab=23.05 E-value=3e+02 Score=30.91 Aligned_cols=71 Identities=17% Similarity=0.418 Sum_probs=45.5
Q ss_pred CCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccccCC
Q 006252 193 SDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGG 272 (654)
Q Consensus 193 ~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~~GG 272 (654)
.+|++||+++++.|++.|=+.|- . + ...+. +....+.+...+.|.+.++.+ |+... +-
T Consensus 17 ~dw~~di~~A~~~GIDgFaLNig--~--~--------d~~~~---~~l~~a~~AA~~~gFKlf~Sf---D~~~~----~~ 74 (386)
T PF03659_consen 17 EDWEADIRLAQAAGIDGFALNIG--S--S--------DSWQP---DQLADAYQAAEAVGFKLFFSF---DMNSL----GP 74 (386)
T ss_pred HHHHHHHHHHHHcCCCEEEEecc--c--C--------CcccH---HHHHHHHHHHHhcCCEEEEEe---cccCC----CC
Confidence 46789999999999999988885 1 1 12333 334568888888897776655 55322 33
Q ss_pred CCChhhHHHHHHH
Q 006252 273 WKLEKTIDYFMDF 285 (654)
Q Consensus 273 W~n~~~vd~Fa~Y 285 (654)
|...+++.....|
T Consensus 75 ~~~~~~~~~i~~y 87 (386)
T PF03659_consen 75 WSQDELIALIKKY 87 (386)
T ss_pred CCHHHHHHHHHHH
Confidence 4444444444444
No 106
>cd07943 DRE_TIM_HOA 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain. 4-hydroxy 2-ketovalerate aldolase (Also known as 4-hydroxy-2-ketovalerate aldolase and 4-hydroxy-2-oxopentanoate aldolase (HOA)) converts 4-hydroxy-2-oxopentanoate to acetaldehyde and pyruvate, the penultimate step in the meta-cleavage pathway for the degradation of phenols, cresols and catechol. This family includes the Escherichia coli MhpE aldolase, the Pseudomonas DmpG aldolase, and the Burkholderia xenovorans BphI pyruvate aldolase. In Pseudomonas, the DmpG aldolase tightly associates with a dehydrogenase (DmpF ) and is inactive without it. HOA has a canonical TIM-barrel fold with a C-terminal extension that forms a funnel leading to the active site. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate
Probab=23.02 E-value=2.3e+02 Score=29.50 Aligned_cols=67 Identities=24% Similarity=0.234 Sum_probs=49.1
Q ss_pred HHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccccCCCCC
Q 006252 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKL 275 (654)
Q Consensus 196 ~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~~GGW~n 275 (654)
.+|++.+++.|++.+|+.++.+.+. -...+++.++++|++..+++-.- +..+
T Consensus 88 ~~~i~~a~~~g~~~iri~~~~s~~~------------------~~~~~i~~ak~~G~~v~~~~~~~----------~~~~ 139 (263)
T cd07943 88 VDDLKMAADLGVDVVRVATHCTEAD------------------VSEQHIGAARKLGMDVVGFLMMS----------HMAS 139 (263)
T ss_pred HHHHHHHHHcCCCEEEEEechhhHH------------------HHHHHHHHHHHCCCeEEEEEEec----------cCCC
Confidence 6899999999999999988766441 13568999999999999988431 2223
Q ss_pred hhhHHHHHHHHHHHHHHhC
Q 006252 276 EKTIDYFMDFTRLVVDSVS 294 (654)
Q Consensus 276 ~~~vd~Fa~YA~~vferfG 294 (654)
.+.+.++++.+. ..|
T Consensus 140 ---~~~~~~~~~~~~-~~G 154 (263)
T cd07943 140 ---PEELAEQAKLME-SYG 154 (263)
T ss_pred ---HHHHHHHHHHHH-HcC
Confidence 466777777764 344
No 107
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=22.90 E-value=4.2e+02 Score=31.45 Aligned_cols=98 Identities=11% Similarity=0.179 Sum_probs=57.1
Q ss_pred cHHHH-HHHHhcCCCeEEe-cccccccCC-CC--CCCCCccccC--hhHHHHHHHHHHHHHHcCCeEEEEec--cCC---
Q 006252 195 PDIEL-KLAKDTGVSVFRL-GIDWSRIMP-AE--PVNGLKETVN--FAALERYKWIINRVRSYGMKVMLTLF--HHS--- 262 (654)
Q Consensus 195 y~eDi-~Lmk~lGv~~yRf-SIsWsRI~P-~~--~~~G~~g~vN--~~Gl~~Yd~lId~L~~~GI~PiVTL~--HwD--- 262 (654)
..+.+ +-+|+||++++=+ .|..+.-.. .| +.+- -.++ .-..+=.++||++|.++||++|+.+- |..
T Consensus 158 i~~~l~dyl~~LGvt~i~L~Pi~e~~~~~~wGY~~~~y--~~~~~~~Gt~~dlk~lV~~~H~~Gi~VilD~V~NH~~~~~ 235 (613)
T TIGR01515 158 LADQLIPYVKELGFTHIELLPVAEHPFDGSWGYQVTGY--YAPTSRFGTPDDFMYFVDACHQAGIGVILDWVPGHFPKDD 235 (613)
T ss_pred HHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCcccC--cccccccCCHHHHHHHHHHHHHCCCEEEEEecccCcCCcc
Confidence 34554 8899999999988 333321000 00 0000 0011 00133468999999999999999854 532
Q ss_pred --------Ccccccc------cCCC-------CChhhHHHHHHHHHHHHHHhC
Q 006252 263 --------LPAWAGE------YGGW-------KLEKTIDYFMDFTRLVVDSVS 294 (654)
Q Consensus 263 --------LP~wL~~------~GGW-------~n~~~vd~Fa~YA~~vferfG 294 (654)
.|.+... ...| .++++.+.+.+=++.-+++|+
T Consensus 236 ~~~~~~~~~~~y~~~~~~~~~~~~w~~~~~~~~~~~Vr~~l~~~~~~W~~ey~ 288 (613)
T TIGR01515 236 HGLAEFDGTPLYEHKDPRDGEHWDWGTLIFDYGRPEVRNFLVANALYWAEFYH 288 (613)
T ss_pred chhhccCCCcceeccCCccCcCCCCCCceecCCCHHHHHHHHHHHHHHHHHhC
Confidence 1212110 0112 357888899998888888886
No 108
>PF04055 Radical_SAM: Radical SAM superfamily; InterPro: IPR007197 Radical SAM proteins catalyze diverse reactions, including unusual methylations, isomerization, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation. Evidence exists that these proteins generate a radical species by reductive cleavage of S:-adenosylmethionine (SAM) through an unusual Fe-S centre [, ].; GO: 0003824 catalytic activity, 0051536 iron-sulfur cluster binding; PDB: 2A5H_D 3T7V_A 3C8F_A 3CB8_A 2FB2_A 2FB3_A 3CIX_A 3IIX_A 3IIZ_A 3CIW_A ....
Probab=22.83 E-value=95 Score=28.12 Aligned_cols=113 Identities=16% Similarity=0.176 Sum_probs=64.7
Q ss_pred ccCccchhHHHHHhhhhhhh-hcccccccCCCCCcCCccccccccccccccC--CCCc---ccccCCCCcHHHHHHHHhc
Q 006252 132 KRKPVKLSIEAMIRGFQKYI-EVDEGEEVSGENEVPTENEEVHHKVTAWHNV--PHPE---ERLRFWSDPDIELKLAKDT 205 (654)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~--~~pe---~a~~~y~~y~eDi~Lmk~l 205 (654)
..++-.+.+|-+++.+.++. +-+ ...+.-+-.+|....++.......... .... .+...... ++.++.+++.
T Consensus 22 ~~~~~~~~~e~i~~~~~~~~~~~~-~~~i~~~~gep~~~~~~~~~~~~~~~~~~~~~~i~~~t~~~~~~-~~~l~~l~~~ 99 (166)
T PF04055_consen 22 KNKPREMSPEEILEEIKELKQDKG-VKEIFFGGGEPTLHPDFIELLELLRKIKKRGIRISINTNGTLLD-EELLDELKKL 99 (166)
T ss_dssp TCGCEECHHHHHHHHHHHHHHHTT-HEEEEEESSTGGGSCHHHHHHHHHHHCTCTTEEEEEEEESTTHC-HHHHHHHHHT
T ss_pred CcccccCCHHHHHHHHHHHhHhcC-CcEEEEeecCCCcchhHHHHHHHHHHhhccccceeeeccccchh-HHHHHHHHhc
Confidence 44455677788888877773 433 333433444666666554433222221 0111 11122222 8899999999
Q ss_pred CCCeEEecccc-ccc-CCCCCCCCCcccc-ChhHHHHHHHHHHHHHHcCCeE
Q 006252 206 GVSVFRLGIDW-SRI-MPAEPVNGLKETV-NFAALERYKWIINRVRSYGMKV 254 (654)
Q Consensus 206 Gv~~yRfSIsW-sRI-~P~~~~~G~~g~v-N~~Gl~~Yd~lId~L~~~GI~P 254 (654)
|++.+++|++= +.- .. ..+ .....+..-+.++.|.+.|+.+
T Consensus 100 ~~~~i~~~l~s~~~~~~~--------~~~~~~~~~~~~~~~l~~l~~~g~~~ 143 (166)
T PF04055_consen 100 GVDRIRISLESLDEESVL--------RIINRGKSFERVLEALERLKEAGIPR 143 (166)
T ss_dssp TCSEEEEEEBSSSHHHHH--------HHHSSTSHHHHHHHHHHHHHHTTSET
T ss_pred CccEEecccccCCHHHhh--------hhhcCCCCHHHHHHHHHHHHHcCCCc
Confidence 99999999942 211 11 111 1123566778999999999985
No 109
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=22.79 E-value=1.3e+02 Score=34.97 Aligned_cols=65 Identities=17% Similarity=0.238 Sum_probs=40.4
Q ss_pred CCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCc----cccChh--HHHHHHHHHHHHHHcCCeEEEEec
Q 006252 192 WSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLK----ETVNFA--ALERYKWIINRVRSYGMKVMLTLF 259 (654)
Q Consensus 192 y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~----g~vN~~--Gl~~Yd~lId~L~~~GI~PiVTL~ 259 (654)
+.-..+-++-+++||++++=++--...-.-. .|-. -.+|+. ..+=++.||++++++||++|+++.
T Consensus 26 ~~gi~~~l~yl~~lG~~~i~l~Pi~~~~~~~---~gY~~~d~~~id~~~Gt~~~~~~lv~~ah~~gi~vilD~v 96 (543)
T TIGR02403 26 LRGIIEKLDYLKKLGVDYIWLNPFYVSPQKD---NGYDVSDYYAINPLFGTMADFEELVSEAKKRNIKIMLDMV 96 (543)
T ss_pred HHHHHHhHHHHHHcCCCEEEECCcccCCCCC---CCCCccccCccCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4445667899999999998765433211000 0000 011211 245578999999999999999864
No 110
>PRK12858 tagatose 1,6-diphosphate aldolase; Reviewed
Probab=22.74 E-value=3.2e+02 Score=30.17 Aligned_cols=52 Identities=15% Similarity=0.255 Sum_probs=43.5
Q ss_pred HHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEe
Q 006252 199 LKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTL 258 (654)
Q Consensus 199 i~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL 258 (654)
++-++++|.+++-+-+-|. |+. ...+|..-+++..++.++|.+.||.-++-+
T Consensus 112 ve~a~~~GAdAVk~lv~~~---~d~-----~~~~~~~~~~~l~rv~~ec~~~giPlllE~ 163 (340)
T PRK12858 112 VRRIKEAGADAVKLLLYYR---PDE-----DDAINDRKHAFVERVGAECRANDIPFFLEP 163 (340)
T ss_pred HHHHHHcCCCEEEEEEEeC---CCc-----chHHHHHHHHHHHHHHHHHHHcCCceEEEE
Confidence 6778999999999999997 442 134578889999999999999999988854
No 111
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins. The endo-beta-N-acetylglucosaminidases have a glycosyl hydrolase family 18 (GH18) catalytic domain. Some members also have an additional C-terminal glycosyl hydrolase family 20 (GH20) domain while others have an N-terminal domain of unknown function (pfam08522). Members of this family include endo-beta-N-acetylglucosaminidase S (EndoS) from Streptococcus pyogenes, EndoF1, EndoF2, EndoF3, and EndoH from Flavobacterium meningosepticum, and EndoE from Enterococcus faecalis. EndoS is a secreted endoglycosidase from Streptococcus pyogenes that specifically hydrolyzes the glycan on human IgG between two core N-acetylglucosamine residues. EndoE is a secreted endoglycosidase, encoded by the ndoE gene in Enterococcus faecalis, that hydrolyzes the glycan on human RNase B.
Probab=22.48 E-value=2.8e+02 Score=28.46 Aligned_cols=56 Identities=18% Similarity=0.147 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEeccCCCcccccccCCCCChhhHHHHHHHHHHHHHHhC
Q 006252 236 ALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKLEKTIDYFMDFTRLVVDSVS 294 (654)
Q Consensus 236 Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~~GGW~n~~~vd~Fa~YA~~vferfG 294 (654)
.++...+.|..|+++|++.++++.-+.....+ ....+++..+.|++-...++++||
T Consensus 49 ~~~~~~~~i~~l~~kG~KVl~sigg~~~~~~~---~~~~~~~~~~~fa~~l~~~v~~yg 104 (255)
T cd06542 49 LLTNKETYIRPLQAKGTKVLLSILGNHLGAGF---ANNLSDAAAKAYAKAIVDTVDKYG 104 (255)
T ss_pred hhHHHHHHHHHHhhCCCEEEEEECCCCCCCCc---cccCCHHHHHHHHHHHHHHHHHhC
Confidence 35667789999999999999999765544322 012345445555555555556654
No 112
>PRK08195 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated
Probab=21.95 E-value=1.8e+02 Score=31.96 Aligned_cols=68 Identities=22% Similarity=0.209 Sum_probs=51.2
Q ss_pred HHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccccCCCCC
Q 006252 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKL 275 (654)
Q Consensus 196 ~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~~GGW~n 275 (654)
.+|++.+.+.|++.+|+...+++.. --...|+.+++.|++..+++..- .
T Consensus 91 ~~dl~~a~~~gvd~iri~~~~~e~~------------------~~~~~i~~ak~~G~~v~~~l~~a-------------~ 139 (337)
T PRK08195 91 VDDLKMAYDAGVRVVRVATHCTEAD------------------VSEQHIGLARELGMDTVGFLMMS-------------H 139 (337)
T ss_pred HHHHHHHHHcCCCEEEEEEecchHH------------------HHHHHHHHHHHCCCeEEEEEEec-------------c
Confidence 6899999999999999987655431 13578999999999999988631 1
Q ss_pred hhhHHHHHHHHHHHHHHhCC
Q 006252 276 EKTIDYFMDFTRLVVDSVSD 295 (654)
Q Consensus 276 ~~~vd~Fa~YA~~vferfGD 295 (654)
...++.+.+.++.+. .+|-
T Consensus 140 ~~~~e~l~~~a~~~~-~~Ga 158 (337)
T PRK08195 140 MAPPEKLAEQAKLME-SYGA 158 (337)
T ss_pred CCCHHHHHHHHHHHH-hCCC
Confidence 234677888888764 4664
No 113
>PRK11858 aksA trans-homoaconitate synthase; Reviewed
Probab=21.89 E-value=2.3e+02 Score=31.53 Aligned_cols=81 Identities=16% Similarity=0.257 Sum_probs=57.2
Q ss_pred HHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCCcccccccCCCCC
Q 006252 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKL 275 (654)
Q Consensus 196 ~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDLP~wL~~~GGW~n 275 (654)
++||+.+.+.|++.++++++-|.+.-...+ +.--++.++-..+.|..+++.|+++.++.- .++
T Consensus 78 ~~di~~a~~~g~~~i~i~~~~Sd~h~~~~~----~~s~~~~l~~~~~~v~~a~~~G~~v~~~~e----------d~~--- 140 (378)
T PRK11858 78 KSDIDASIDCGVDAVHIFIATSDIHIKHKL----KKTREEVLERMVEAVEYAKDHGLYVSFSAE----------DAS--- 140 (378)
T ss_pred HHHHHHHHhCCcCEEEEEEcCCHHHHHHHh----CCCHHHHHHHHHHHHHHHHHCCCeEEEEec----------cCC---
Confidence 889999999999999999987776432110 122356688888999999999999887642 122
Q ss_pred hhhHHHHHHHHHHHHHHhC
Q 006252 276 EKTIDYFMDFTRLVVDSVS 294 (654)
Q Consensus 276 ~~~vd~Fa~YA~~vferfG 294 (654)
+...+...++++.+.+ .|
T Consensus 141 r~~~~~l~~~~~~~~~-~G 158 (378)
T PRK11858 141 RTDLDFLIEFAKAAEE-AG 158 (378)
T ss_pred CCCHHHHHHHHHHHHh-CC
Confidence 2335667777777654 45
No 114
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do
Probab=21.26 E-value=4.2e+02 Score=28.60 Aligned_cols=105 Identities=14% Similarity=0.137 Sum_probs=64.0
Q ss_pred HHHHHHHHhcCCC--eEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEeccCCC-----cccc-
Q 006252 196 DIELKLAKDTGVS--VFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSL-----PAWA- 267 (654)
Q Consensus 196 ~eDi~Lmk~lGv~--~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~HwDL-----P~wL- 267 (654)
.+-++.+++.++. ++=+++.|..- .+ .-++|++-..--..+|++|+++|++.++.++-+-. |...
T Consensus 27 ~~~~~~~~~~~iP~d~i~lD~~~~~~--~~-----~f~~d~~~FPdp~~~i~~l~~~g~k~~~~~~P~i~~~~~~~~~~~ 99 (317)
T cd06600 27 VEVVDIMQKEGFPYDVVFLDIHYMDS--YR-----LFTWDPYRFPEPKKLIDELHKRNVKLVTIVDPGIRVDQNYSPFLS 99 (317)
T ss_pred HHHHHHHHHcCCCcceEEEChhhhCC--CC-----ceeechhcCCCHHHHHHHHHHCCCEEEEEeeccccCCCCChHHHH
Confidence 3446677777764 44455556431 11 12344433333567999999999998877653322 1110
Q ss_pred -c-------c-----------cC-----CCCChhhHHHHHHHHHHHHHHhCCccceEEEccCcce
Q 006252 268 -G-------E-----------YG-----GWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHV 308 (654)
Q Consensus 268 -~-------~-----------~G-----GW~n~~~vd~Fa~YA~~vferfGDrVk~WiT~NEPnv 308 (654)
. . .| -|+||+..++|.+..+.+....|= .-+|+=+|||..
T Consensus 100 ~~~~~~~v~~~~g~~~~~~~w~G~~~~~Dftnp~a~~ww~~~~~~~~~~~gv-dg~w~D~~Ep~~ 163 (317)
T cd06600 100 GMDKGKFCEIESGELFVGKMWPGTTVYPDFTNPDTREWWAGLFSEWLNSQGV-DGIWLDMNEPSD 163 (317)
T ss_pred HHHCCEEEECCCCCeEEEeecCCCccccCCCChHHHHHHHHHHHHHhhcCCC-ceEEeeCCCCcc
Confidence 0 0 01 267899999998888877655553 347889999964
No 115
>TIGR03234 OH-pyruv-isom hydroxypyruvate isomerase. This enzyme interconverts tartronate semi-aldehyde (TSA, aka 2-hydroxy 3-oxopropionate) and hydroxypyruvate. The E. coli enzyme has been characterized and found to be specific for TSA, contain no cofactors, and have a rather high Km for hydroxypyruvate of 12.5 mM. The gene is ofter found in association with glyoxalate carboligase (which produces TSA), but has been shown to have no effect on growth on glyoxalate when knocked out. This is consistent with the fact that the gene for tartronate semialdehyde reductase (glxR) is also associated and may have primary responsibility for the catabolism of TSA.
Probab=20.94 E-value=1.4e+02 Score=30.43 Aligned_cols=68 Identities=13% Similarity=0.256 Sum_probs=43.6
Q ss_pred CCCCcHHHHHHHHhcCCCeEEecccccccCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEE-EeccCCCc
Q 006252 191 FWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVML-TLFHHSLP 264 (654)
Q Consensus 191 ~y~~y~eDi~Lmk~lGv~~yRfSIsWsRI~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiV-TL~HwDLP 264 (654)
+-+.+++-|+++++||.+.+++...+ . |..+ .........++..+++.+.+.+.||...+ +++|++.|
T Consensus 82 ~~~~~~~~i~~a~~lg~~~i~~~~g~--~-~~~~---~~~~~~~~~~~~l~~l~~~A~~~gi~l~lE~~~~~~~~ 150 (254)
T TIGR03234 82 FREGVALAIAYARALGCPQVNCLAGK--R-PAGV---SPEEARATLVENLRYAADALDRIGLTLLIEPINSFDMP 150 (254)
T ss_pred HHHHHHHHHHHHHHhCCCEEEECcCC--C-CCCC---CHHHHHHHHHHHHHHHHHHHHhcCCEEEEEECCcccCC
Confidence 44566778999999999999864332 1 2110 01122334456778888888999998777 34555555
No 116
>PRK12568 glycogen branching enzyme; Provisional
Probab=20.77 E-value=3.9e+02 Score=32.68 Aligned_cols=87 Identities=15% Similarity=0.275 Sum_probs=53.1
Q ss_pred HHHHHhcCCCeEEecc--------cccc-----cCCCCCCCCCccccChhHHHHHHHHHHHHHHcCCeEEEEec--cCCC
Q 006252 199 LKLAKDTGVSVFRLGI--------DWSR-----IMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF--HHSL 263 (654)
Q Consensus 199 i~Lmk~lGv~~yRfSI--------sWsR-----I~P~~~~~G~~g~vN~~Gl~~Yd~lId~L~~~GI~PiVTL~--HwDL 263 (654)
|.-+|+||++++=+.- +|-= .-|++ .-|. .+=++.||++|.++||.+|+.+. |+.-
T Consensus 276 l~ylk~LGvt~I~LmPi~e~~~~~~wGY~~~~~~a~~~----~~G~-----~~dfk~lV~~~H~~Gi~VIlD~V~nH~~~ 346 (730)
T PRK12568 276 IPYVQQLGFTHIELLPITEHPFGGSWGYQPLGLYAPTA----RHGS-----PDGFAQFVDACHRAGIGVILDWVSAHFPD 346 (730)
T ss_pred HHHHHHcCCCEEEECccccCCCCCCCCCCCCcCCccCc----ccCC-----HHHHHHHHHHHHHCCCEEEEEeccccCCc
Confidence 6889999999986543 3410 01111 0122 34578999999999999999864 4321
Q ss_pred cc---------cccc----c-C---CC-------CChhhHHHHHHHHHHHHHHhC
Q 006252 264 PA---------WAGE----Y-G---GW-------KLEKTIDYFMDFTRLVVDSVS 294 (654)
Q Consensus 264 P~---------wL~~----~-G---GW-------~n~~~vd~Fa~YA~~vferfG 294 (654)
-. .+.+ . | .| .++++.+.+.+=+..-+++|+
T Consensus 347 d~~~l~~fdg~~~Ye~~d~~~g~~~~W~~~~~N~~~peVr~~li~~a~~Wl~eyh 401 (730)
T PRK12568 347 DAHGLAQFDGAALYEHADPREGMHRDWNTLIYNYGRPEVTAYLLGSALEWIEHYH 401 (730)
T ss_pred cccccccCCCccccccCCCcCCccCCCCCeecccCCHHHHHHHHHHHHHHHHHhC
Confidence 10 0110 1 1 23 357777888887888777775
Done!