Query 006261
Match_columns 653
No_of_seqs 237 out of 1280
Neff 5.3
Searched_HMMs 46136
Date Thu Mar 28 20:42:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006261.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006261hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0626 Beta-glucosidase, lact 100.0 7E-104 2E-108 860.7 36.1 383 165-553 62-512 (524)
2 PLN02849 beta-glucosidase 100.0 3E-99 6E-104 840.1 33.9 379 165-554 55-487 (503)
3 TIGR01233 lacG 6-phospho-beta- 100.0 6.5E-99 1E-103 832.3 35.9 366 165-553 29-467 (467)
4 PLN02998 beta-glucosidase 100.0 1.1E-98 2E-103 834.6 33.4 375 165-550 56-488 (497)
5 PRK13511 6-phospho-beta-galact 100.0 5.1E-98 1E-102 826.0 35.9 364 165-552 30-468 (469)
6 PLN02814 beta-glucosidase 100.0 6.4E-98 1E-102 829.6 34.8 377 165-554 53-487 (504)
7 PRK09589 celA 6-phospho-beta-g 100.0 1.5E-96 3E-101 815.0 35.7 369 165-552 29-474 (476)
8 PRK09593 arb 6-phospho-beta-gl 100.0 2.4E-96 5E-101 813.7 35.2 370 165-553 31-476 (478)
9 PF00232 Glyco_hydro_1: Glycos 100.0 1.5E-97 3E-102 819.9 23.8 370 165-552 30-455 (455)
10 COG2723 BglB Beta-glucosidase/ 100.0 2.6E-96 6E-101 796.2 31.1 368 165-551 29-454 (460)
11 PRK09852 cryptic 6-phospho-bet 100.0 1.5E-94 3.3E-99 797.9 35.9 370 165-553 29-472 (474)
12 PRK15014 6-phospho-beta-glucos 100.0 5.7E-94 1.2E-98 794.2 37.3 369 165-552 31-475 (477)
13 TIGR03356 BGL beta-galactosida 100.0 1.1E-90 2.4E-95 759.8 33.0 360 164-543 25-427 (427)
14 smart00633 Glyco_10 Glycosyl h 99.6 7.5E-14 1.6E-18 143.7 21.9 249 214-542 1-253 (254)
15 PF00150 Cellulase: Cellulase 99.5 8E-13 1.7E-17 134.7 19.3 254 194-509 22-279 (281)
16 PRK10150 beta-D-glucuronidase; 99.1 4.4E-08 9.5E-13 112.8 27.5 252 194-549 314-594 (604)
17 PF07745 Glyco_hydro_53: Glyco 99.0 3.7E-08 8.1E-13 105.8 21.1 240 196-507 27-296 (332)
18 PF00331 Glyco_hydro_10: Glyco 98.9 1.5E-08 3.2E-13 108.4 13.1 267 206-545 34-318 (320)
19 PF01229 Glyco_hydro_39: Glyco 98.8 1.8E-07 3.9E-12 105.3 19.7 289 194-548 40-361 (486)
20 PF02449 Glyco_hydro_42: Beta- 98.8 1.1E-08 2.3E-13 111.1 8.9 108 193-309 10-141 (374)
21 COG3693 XynA Beta-1,4-xylanase 98.4 3.2E-05 6.9E-10 82.2 20.4 263 215-549 68-343 (345)
22 PF02836 Glyco_hydro_2_C: Glyc 98.2 5.3E-05 1.1E-09 79.8 17.9 92 192-306 35-132 (298)
23 COG3867 Arabinogalactan endo-1 97.8 0.017 3.6E-07 61.4 25.4 241 196-506 66-341 (403)
24 PRK10340 ebgA cryptic beta-D-g 97.6 0.0043 9.2E-08 76.3 20.6 220 192-549 354-601 (1021)
25 COG1874 LacA Beta-galactosidas 97.3 0.00046 1E-08 80.5 7.4 125 182-317 21-173 (673)
26 COG2730 BglC Endoglucanase [Ca 97.2 0.0021 4.6E-08 71.2 10.7 110 196-308 76-193 (407)
27 PF11790 Glyco_hydro_cc: Glyco 97.0 0.0043 9.2E-08 64.0 10.6 78 405-512 136-217 (239)
28 PF14587 Glyco_hydr_30_2: O-Gl 96.9 0.3 6.6E-06 54.0 23.6 275 203-530 57-373 (384)
29 PRK09525 lacZ beta-D-galactosi 96.8 0.083 1.8E-06 65.3 20.6 89 192-306 370-463 (1027)
30 PF03198 Glyco_hydro_72: Gluca 96.7 0.068 1.5E-06 57.4 16.9 47 195-260 55-101 (314)
31 PF01301 Glyco_hydro_35: Glyco 96.0 0.013 2.8E-07 63.1 6.6 97 193-296 24-129 (319)
32 PLN03059 beta-galactosidase; P 95.3 0.14 3E-06 61.6 12.1 113 193-311 59-182 (840)
33 COG3934 Endo-beta-mannanase [C 95.3 0.087 1.9E-06 59.2 9.6 289 172-549 4-321 (587)
34 PLN02803 beta-amylase 94.8 0.081 1.8E-06 60.2 7.9 104 195-308 109-252 (548)
35 PLN02161 beta-amylase 94.4 0.11 2.4E-06 58.9 7.6 110 189-308 113-262 (531)
36 PLN00197 beta-amylase; Provisi 94.3 0.17 3.7E-06 57.9 8.9 105 194-308 128-272 (573)
37 PF01373 Glyco_hydro_14: Glyco 94.0 0.069 1.5E-06 59.2 5.1 103 194-307 17-151 (402)
38 PF13204 DUF4038: Protein of u 93.1 0.64 1.4E-05 49.5 10.5 108 195-306 32-156 (289)
39 COG3664 XynB Beta-xylosidase [ 93.0 1.8 3.8E-05 48.3 13.7 262 202-546 14-294 (428)
40 PLN02705 beta-amylase 92.5 0.4 8.7E-06 55.5 8.2 96 193-296 268-403 (681)
41 PLN02801 beta-amylase 92.3 0.29 6.3E-06 55.6 6.7 104 195-307 39-182 (517)
42 PLN02905 beta-amylase 92.1 0.25 5.5E-06 57.2 6.1 100 189-296 282-421 (702)
43 PF02055 Glyco_hydro_30: O-Gly 90.7 15 0.00032 42.4 18.5 113 404-548 300-421 (496)
44 COG3250 LacZ Beta-galactosidas 88.2 2.4 5.3E-05 51.3 10.1 123 146-306 282-407 (808)
45 PF00332 Glyco_hydro_17: Glyco 84.8 1.4 3E-05 47.6 5.2 87 446-539 213-307 (310)
46 PF14488 DUF4434: Domain of un 80.3 16 0.00035 35.9 10.3 105 194-306 21-130 (166)
47 KOG0496 Beta-galactosidase [Ca 71.3 17 0.00036 43.0 8.8 92 195-292 51-154 (649)
48 PF12876 Cellulase-like: Sugar 70.3 7.3 0.00016 33.9 4.5 18 290-307 2-22 (88)
49 KOG0626 Beta-glucosidase, lact 67.8 2.2 4.7E-05 49.0 0.8 112 497-627 384-500 (524)
50 smart00642 Aamy Alpha-amylase 64.0 20 0.00043 35.2 6.6 68 190-259 16-91 (166)
51 PLN02361 alpha-amylase 49.3 35 0.00077 38.3 6.2 69 190-258 26-96 (401)
52 cd03174 DRE_TIM_metallolyase D 44.7 85 0.0018 32.1 7.9 83 196-294 77-159 (265)
53 cd07945 DRE_TIM_CMS Leptospira 43.9 71 0.0015 34.0 7.3 86 194-294 75-160 (280)
54 COG5309 Exo-beta-1,3-glucanase 43.7 1.2E+02 0.0025 32.8 8.5 58 181-259 51-108 (305)
55 PF14871 GHL6: Hypothetical gl 42.6 58 0.0013 31.0 5.7 56 195-259 2-65 (132)
56 PLN00196 alpha-amylase; Provis 41.5 39 0.00085 38.2 5.1 72 190-261 41-117 (428)
57 COG1501 Alpha-glucosidases, fa 40.0 1.7E+02 0.0036 35.9 10.3 100 205-312 294-422 (772)
58 PRK05799 coproporphyrinogen II 39.5 1.1E+02 0.0023 33.5 8.1 95 196-307 99-193 (374)
59 cd06592 GH31_glucosidase_KIAA1 39.0 2.2E+02 0.0048 30.5 10.1 105 195-307 32-167 (303)
60 PRK05692 hydroxymethylglutaryl 38.5 1E+02 0.0022 33.0 7.4 88 194-294 80-168 (287)
61 PRK12581 oxaloacetate decarbox 38.4 1.1E+02 0.0024 35.2 8.1 73 192-294 99-176 (468)
62 cd07939 DRE_TIM_NifV Streptomy 38.3 87 0.0019 32.6 6.8 81 196-294 72-152 (259)
63 PF07488 Glyco_hydro_67M: Glyc 38.2 1.9E+02 0.0042 31.7 9.3 114 168-295 28-150 (328)
64 PRK14040 oxaloacetate decarbox 36.7 1.3E+02 0.0027 35.8 8.4 69 196-294 100-168 (593)
65 PRK12399 tagatose 1,6-diphosph 36.1 2.3E+02 0.005 31.2 9.6 60 197-264 109-168 (324)
66 cd07948 DRE_TIM_HCS Saccharomy 36.1 59 0.0013 34.3 5.2 60 196-259 74-133 (262)
67 PLN02746 hydroxymethylglutaryl 35.9 1.1E+02 0.0024 33.8 7.3 87 195-294 123-210 (347)
68 cd07944 DRE_TIM_HOA_like 4-hyd 35.8 1.4E+02 0.003 31.5 7.9 67 196-294 85-151 (266)
69 cd06601 GH31_lyase_GLase GLase 35.4 1.1E+02 0.0023 33.6 7.1 70 241-312 67-140 (332)
70 PRK14041 oxaloacetate decarbox 35.4 1.3E+02 0.0028 34.7 8.0 73 192-294 89-166 (467)
71 COG5520 O-Glycosyl hydrolase [ 35.0 7.1E+02 0.015 28.1 15.6 92 204-308 77-180 (433)
72 PRK05402 glycogen branching en 33.6 1.8E+02 0.0039 35.2 9.3 93 195-300 267-401 (726)
73 PLN02784 alpha-amylase 33.4 88 0.0019 38.6 6.5 69 190-258 518-588 (894)
74 PF02638 DUF187: Glycosyl hydr 33.0 2.3E+02 0.0049 30.7 9.1 100 193-294 19-154 (311)
75 cd06603 GH31_GANC_GANAB_alpha 32.7 1.1E+02 0.0024 33.2 6.8 70 241-310 67-167 (339)
76 TIGR02090 LEU1_arch isopropylm 32.2 1.2E+02 0.0026 33.5 6.9 84 193-294 71-154 (363)
77 PRK12858 tagatose 1,6-diphosph 31.9 2.2E+02 0.0047 31.4 8.8 53 199-259 112-164 (340)
78 COG1523 PulA Type II secretory 31.6 1E+02 0.0022 37.2 6.7 60 199-259 206-286 (697)
79 PRK12313 glycogen branching en 31.2 2.3E+02 0.0049 33.7 9.5 92 192-294 169-302 (633)
80 PRK04161 tagatose 1,6-diphosph 30.8 2.3E+02 0.005 31.3 8.6 60 197-264 111-170 (329)
81 PRK12331 oxaloacetate decarbox 30.7 2E+02 0.0044 32.9 8.6 70 195-294 98-167 (448)
82 TIGR00539 hemN_rel putative ox 30.0 1.3E+02 0.0029 32.8 6.9 61 196-264 100-162 (360)
83 cd06543 GH18_PF-ChiA-like PF-C 29.4 2.3E+02 0.0049 30.6 8.3 84 200-294 19-104 (294)
84 TIGR01210 conserved hypothetic 29.2 2.3E+02 0.0049 30.7 8.3 110 196-321 117-229 (313)
85 TIGR02631 xylA_Arthro xylose i 29.0 6.7E+02 0.014 28.0 12.1 78 188-276 27-105 (382)
86 cd07938 DRE_TIM_HMGL 3-hydroxy 28.6 1.9E+02 0.0041 30.6 7.5 87 195-294 75-162 (274)
87 PRK09505 malS alpha-amylase; R 28.6 1.6E+02 0.0035 35.5 7.7 68 195-262 232-318 (683)
88 PRK09441 cytoplasmic alpha-amy 27.8 82 0.0018 35.9 4.9 73 190-262 19-107 (479)
89 TIGR02660 nifV_homocitr homoci 27.7 1.5E+02 0.0032 32.7 6.7 82 195-294 74-155 (365)
90 PRK12677 xylose isomerase; Pro 26.8 8.8E+02 0.019 27.1 12.6 80 185-276 24-104 (384)
91 cd07941 DRE_TIM_LeuA3 Desulfob 26.2 2E+02 0.0043 30.4 7.1 81 196-291 81-162 (273)
92 PLN02389 biotin synthase 26.0 1.4E+02 0.0031 33.3 6.2 84 165-259 148-234 (379)
93 TIGR00433 bioB biotin syntheta 25.8 1.1E+02 0.0023 32.2 5.0 54 196-257 123-177 (296)
94 cd06593 GH31_xylosidase_YicI Y 25.4 2.8E+02 0.0061 29.5 8.2 105 195-307 26-161 (308)
95 cd02874 GH18_CFLE_spore_hydrol 25.2 2.3E+02 0.005 30.1 7.5 95 188-294 4-103 (313)
96 TIGR01515 branching_enzym alph 25.0 3.4E+02 0.0075 32.1 9.5 97 193-294 156-288 (613)
97 COG3534 AbfA Alpha-L-arabinofu 24.5 1.2E+03 0.025 27.3 14.1 97 196-306 52-174 (501)
98 cd07943 DRE_TIM_HOA 4-hydroxy- 24.3 2.3E+02 0.0051 29.5 7.2 67 196-294 88-154 (263)
99 PF02065 Melibiase: Melibiase; 23.8 5E+02 0.011 29.3 10.0 96 195-294 60-183 (394)
100 cd02803 OYE_like_FMN_family Ol 23.4 9.1E+02 0.02 25.6 15.5 32 230-261 69-100 (327)
101 TIGR03471 HpnJ hopanoid biosyn 23.3 3.5E+02 0.0076 30.6 8.9 75 196-287 287-363 (472)
102 PF04646 DUF604: Protein of un 23.2 54 0.0012 34.8 2.1 76 243-320 73-148 (255)
103 TIGR01232 lacD tagatose 1,6-di 23.2 3.6E+02 0.0079 29.7 8.4 60 198-265 111-170 (325)
104 PLN02447 1,4-alpha-glucan-bran 22.5 4.5E+02 0.0097 32.3 9.8 60 196-260 254-322 (758)
105 PRK11858 aksA trans-homoaconit 22.2 2.4E+02 0.0052 31.3 7.1 81 196-294 78-158 (378)
106 PF11997 DUF3492: Domain of un 22.2 1.1E+02 0.0024 32.4 4.3 24 444-472 185-208 (268)
107 TIGR01108 oadA oxaloacetate de 22.0 3.4E+02 0.0074 32.2 8.6 69 196-294 94-162 (582)
108 PF03659 Glyco_hydro_71: Glyco 21.7 2.3E+02 0.0051 31.7 6.9 51 193-258 17-67 (386)
109 PF12891 Glyco_hydro_44: Glyco 21.5 2.4E+02 0.0051 29.8 6.4 72 238-309 24-138 (239)
110 cd06542 GH18_EndoS-like Endo-b 21.4 3E+02 0.0064 28.3 7.2 56 236-294 49-104 (255)
111 cd06595 GH31_xylosidase_XylS-l 20.5 2.7E+02 0.0059 29.6 6.9 76 232-309 68-163 (292)
112 cd06602 GH31_MGAM_SI_GAA This 20.5 3.4E+02 0.0075 29.6 7.8 107 195-309 26-169 (339)
113 cd06598 GH31_transferase_CtsZ 20.3 2.7E+02 0.0058 30.0 6.8 111 196-309 27-168 (317)
114 PRK08195 4-hyroxy-2-oxovalerat 20.1 4E+02 0.0087 29.2 8.2 68 196-295 91-158 (337)
115 cd06600 GH31_MGAM-like This fa 20.1 3.8E+02 0.0083 28.8 8.0 106 196-309 27-164 (317)
No 1
>KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.1e-104 Score=860.74 Aligned_cols=383 Identities=32% Similarity=0.514 Sum_probs=331.0
Q ss_pred CCCchhhhcc-cccccccCCCccccccCCCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHH
Q 006261 165 VPTENEEVHH-KVTAWHNVPHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWI 243 (653)
Q Consensus 165 ~~~~~~~~~~-~~~~~~n~~~~~~a~~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~L 243 (653)
.||+||.|+| .|+...+..+++.||++||+|+|||+|||+||+++||||||||||+|.|++ .+.||++||+||++|
T Consensus 62 g~svWD~f~~~~p~~~~~~~ngdva~D~Yh~ykeDv~Lmk~lgv~afRFSIsWSRIlP~G~~---~~gVN~~Gi~fY~~L 138 (524)
T KOG0626|consen 62 GPSVWDTFTHKYPGKICDGSNGDVAVDFYHRYKEDVKLMKELGVDAFRFSISWSRILPNGRL---TGGVNEAGIQFYNNL 138 (524)
T ss_pred CCchhhhhhccCCcccccCCCCCeechhhhhhHHHHHHHHHcCCCeEEEEeehHhhCCCCCc---CCCcCHHHHHHHHHH
Confidence 7899999998 555767777899999999999999999999999999999999999999742 357999999999999
Q ss_pred HHHHHHcCCeEEEEeccCCCCccccc-cCCCCChhhHHHHHHHHHHHHHHhcCccceEEEccCcceeeeccccCCCCCCC
Q 006261 244 INRVRSYGMKVMLTLFHHSLPAWAGE-YGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCMLTYCAGTWPGG 322 (653)
Q Consensus 244 Id~L~~~GIePiVTL~HwDLP~wL~~-~GGW~n~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v~~~~GY~~G~~PPG 322 (653)
|++|+++||+|+|||||||+||+|++ ||||+|++++++|.+||++||++||||||+|||||||++++..||..|..|||
T Consensus 139 I~eL~~nGI~P~VTLfHwDlPq~LeDeYgGwLn~~ivedF~~yA~~CF~~fGDrVK~WiT~NEP~v~s~~gY~~G~~aPG 218 (524)
T KOG0626|consen 139 IDELLANGIEPFVTLFHWDLPQALEDEYGGWLNPEIVEDFRDYADLCFQEFGDRVKHWITFNEPNVFSIGGYDTGTKAPG 218 (524)
T ss_pred HHHHHHcCCeEEEEEecCCCCHHHHHHhccccCHHHHHHHHHHHHHHHHHhcccceeeEEecccceeeeehhccCCCCCC
Confidence 99999999999999999999999987 89999999999999999999999999999999999999999999999999999
Q ss_pred CCchhh-hh-hcCCCchhHHHHHHHHHHHHHHHHHHHH-hcCCCCCCeEEEEeecccccCCCc--ccHHHHHHHhhcc--
Q 006261 323 NPDMLE-VA-TSALPTGVFNQAMHWMAIAHSKAYDYIH-AKSTSTKSKVGVAHHVSFMRPYGL--FDVTAVTLANTLT-- 395 (653)
Q Consensus 323 ~~~~~~-~~-~~~~~~~~~~~a~h~LLlAHa~Ay~~ir-~~~~~~~g~IGi~~~~~~~~P~~~--~D~~aa~~~n~l~-- 395 (653)
+++..- .+ +..+.++.| .|+||||+|||+||++|| +++..|+|+|||+++..|++|+++ .|..|+.++..+.
T Consensus 219 rCs~~~~~c~~g~s~~epY-iv~HNllLAHA~Av~~yr~kyk~~Q~G~IGi~~~~~w~eP~~~s~~D~~Aa~Ra~~F~~g 297 (524)
T KOG0626|consen 219 RCSKYVGNCSAGNSGTEPY-IVAHNLLLAHAAAVDLYRKKYKKKQGGKIGIALSARWFEPYDDSKEDKEAAERALDFFLG 297 (524)
T ss_pred CCCcccccCCCCCCCCCcc-hHHHHHHHHHHHHHHHHHHhhhhhcCCeEeEEEeeeeeccCCCChHHHHHHHHHHHhhhh
Confidence 875421 11 123456666 789999999999999999 557789999999999999999874 6777777654321
Q ss_pred ---------------------CCccc-----cccCCCcceeEeeccCCceeeCCCCccc------CCC------------
Q 006261 396 ---------------------TFPYV-----DSISDRLDFIGINYYGQEVVSGPGLKLV------ETD------------ 431 (653)
Q Consensus 396 ---------------------~~p~~-----d~I~~s~DFiGINYYt~~~V~~~g~~~~------~~~------------ 431 (653)
++|.+ ..+++++||+|||||++.+++....... ..+
T Consensus 298 w~l~p~~~GdYP~~Mk~~vg~rLP~FT~ee~~~lKGS~DFvGiNyYts~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 377 (524)
T KOG0626|consen 298 WFLEPLTFGDYPDEMKERVGSRLPKFTEEESKLLKGSYDFVGINYYTSRYVKHLKPPPDPSQPGWSTDSGVDWTLEGNDL 377 (524)
T ss_pred hhhcccccCCcHHHHHHHhcccCCCCCHHHHHHhcCchhhceeehhhhhhhhccCCCCCCCCcccccccceeeeeccccc
Confidence 12222 2468999999999999988875221100 000
Q ss_pred --CCcCC-CCccCchHHHHHHHHHHHHhCCCCCCEEEeecCCCCC-----------CCcccHHHHHHHHHHHHHHHH-cC
Q 006261 432 --EYSES-GRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDE-----------TDLIRRPYVIEHLLAVYAAMI-TG 496 (653)
Q Consensus 432 --~~s~~-Gw~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~ad~-----------~D~~Ri~YL~~hL~~v~~Ai~-dG 496 (653)
..+.. ...++|+||+++|++++++|+ |+||||||||+++. .|..|+.|++.||.+|++||. +|
T Consensus 378 ~~~~~~~~~~~v~P~Glr~~L~yiK~~Y~--np~iyItENG~~d~~~~~~~~~~~l~D~~Ri~Y~~~~L~~~~kAi~~dg 455 (524)
T KOG0626|consen 378 IGPKAGSDWLPVYPWGLRKLLNYIKDKYG--NPPIYITENGFDDLDGGTKSLEVALKDTKRIEYLQNHLQAVLKAIKEDG 455 (524)
T ss_pred ccccccccceeeccHHHHHHHHHHHhhcC--CCcEEEEeCCCCcccccccchhhhhcchHHHHHHHHHHHHHHHHHHhcC
Confidence 01112 236899999999999999999 79999999999973 588999999999999999996 99
Q ss_pred CCeeEEEEeecccccCCcCCCCCccceEEEcCCCCccccccchHHHHHHHHHcCCCC
Q 006261 497 VPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTTGKVT 553 (653)
Q Consensus 497 V~V~GY~~WSLlDNfEW~~GY~~RFGL~~VD~~~~l~R~PK~Sa~wY~~ii~~~~i~ 553 (653)
|||+|||+|||||||||.+||+.||||++|||++.++|+||.|++||+++++.+..+
T Consensus 456 vnv~GYf~WSLmDnfEw~~Gy~~RFGlyyVDf~d~l~R~pK~Sa~wy~~fl~~~~~~ 512 (524)
T KOG0626|consen 456 VNVKGYFVWSLLDNFEWLDGYKVRFGLYYVDFKDPLKRYPKLSAKWYKKFLKGKVKP 512 (524)
T ss_pred CceeeEEEeEcccchhhhcCcccccccEEEeCCCCCcCCchhHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999889999999999999999987654
No 2
>PLN02849 beta-glucosidase
Probab=100.00 E-value=3e-99 Score=840.12 Aligned_cols=379 Identities=24% Similarity=0.378 Sum_probs=321.4
Q ss_pred CCCchhhhcccccccccCCCccccccCCCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHH
Q 006261 165 VPTENEEVHHKVTAWHNVPHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWII 244 (653)
Q Consensus 165 ~~~~~~~~~~~~~~~~n~~~~~~a~~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LI 244 (653)
.||+||.|+|++. +.+++.||+|||+|+|||+|||+||+++|||||+||||+|+| .|.+|++||+||++||
T Consensus 55 g~SiwD~~~~~~~----~~~~~~a~D~YhrY~eDI~Lm~~lG~~aYRfSIsWsRI~P~G-----~g~vN~~gl~fY~~li 125 (503)
T PLN02849 55 KPSVWDTFLHSRN----MSNGDIACDGYHKYKEDVKLMVETGLDAFRFSISWSRLIPNG-----RGSVNPKGLQFYKNFI 125 (503)
T ss_pred cCcceeeeeccCC----CCCCCccccHHHhHHHHHHHHHHcCCCeEEEeccHHhcCcCC-----CCCCCHHHHHHHHHHH
Confidence 6799999998763 457899999999999999999999999999999999999986 3689999999999999
Q ss_pred HHHHHcCCeEEEEeccCCCCccccc-cCCCCChhhHHHHHHHHHHHHHHhcCccceEEEccCcceeeeccccCCCCCCCC
Q 006261 245 NRVRSYGMKVMLTLFHHSLPAWAGE-YGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCMLTYCAGTWPGGN 323 (653)
Q Consensus 245 d~L~~~GIePiVTL~HwDLP~wL~~-~GGW~n~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v~~~~GY~~G~~PPG~ 323 (653)
++|+++||+|||||||||+|+||++ +|||+|++++++|++||++||++|||+||+|+|||||++++..||..|.+|||.
T Consensus 126 d~l~~~GI~P~VTL~H~dlP~~L~~~yGGW~nr~~v~~F~~YA~~~f~~fgDrVk~WiT~NEP~~~~~~gy~~G~~~Pg~ 205 (503)
T PLN02849 126 QELVKHGIEPHVTLFHYDHPQYLEDDYGGWINRRIIKDFTAYADVCFREFGNHVKFWTTINEANIFTIGGYNDGITPPGR 205 (503)
T ss_pred HHHHHcCCeEEEeecCCCCcHHHHHhcCCcCCchHHHHHHHHHHHHHHHhcCcCCEEEEecchhhhhhchhhhccCCCCc
Confidence 9999999999999999999999988 599999999999999999999999999999999999999999999999999986
Q ss_pred Cchh-hhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhc-CCCCCCeEEEEeecccccCCC--cccHHHHHHHhhccC---
Q 006261 324 PDML-EVATSALPTGVFNQAMHWMAIAHSKAYDYIHAK-STSTKSKVGVAHHVSFMRPYG--LFDVTAVTLANTLTT--- 396 (653)
Q Consensus 324 ~~~~-~~~~~~~~~~~~~~a~h~LLlAHa~Ay~~ir~~-~~~~~g~IGi~~~~~~~~P~~--~~D~~aa~~~n~l~~--- 396 (653)
.... ..+.........++++||+++||++||++||+. +..++++||++++..+++|.+ +.|+.|+.+.+.+.+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~a~hn~llAHa~A~~~~~~~~~~~~~~~IGi~~~~~~~~P~~~~~~D~~AA~~~~~~~~~~f 285 (503)
T PLN02849 206 CSSPGRNCSSGNSSTEPYIVGHNLLLAHASVSRLYKQKYKDMQGGSIGFSLFALGFTPSTSSKDDDIATQRAKDFYLGWM 285 (503)
T ss_pred cccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEEECceeecCCCCHHHHHHHHHHHHHhhhhh
Confidence 3210 000000001123589999999999999999975 434578999999999999976 678888765432211
Q ss_pred --------Cc------------c-----ccccCCCcceeEeeccCCceeeCC---C----Cccc---CC---CCCcCCCC
Q 006261 397 --------FP------------Y-----VDSISDRLDFIGINYYGQEVVSGP---G----LKLV---ET---DEYSESGR 438 (653)
Q Consensus 397 --------~p------------~-----~d~I~~s~DFiGINYYt~~~V~~~---g----~~~~---~~---~~~s~~Gw 438 (653)
+| . .+.+++++||||||||++.+|+.. + .... .+ ...+++||
T Consensus 286 ~dp~~~G~YP~~~~~~l~~~lp~~~~~d~~~i~~~~DFlGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gw 365 (503)
T PLN02849 286 LEPLIFGDYPDEMKRTIGSRLPVFSKEESEQVKGSSDFIGVIHYLAASVTNIKIKPSLSGNPDFYSDMGVSLGKFSAFEY 365 (503)
T ss_pred hHHHhCCCccHHHHHHHhcCCCCCCHHHHHHhcCCCCEEEEeccchhhcccCCCCCCCCCCCccccccCCCCCccCCCCC
Confidence 11 1 123678999999999999988641 1 1000 01 22456899
Q ss_pred ccCchHHHHHHHHHHHHhCCCCCCEEEeecCCCC-------CCCcccHHHHHHHHHHHHHHHHcCCCeeEEEEeeccccc
Q 006261 439 GVYPDGLFRVLHQFHERYKHLNLPFIITENGVSD-------ETDLIRRPYVIEHLLAVYAAMITGVPVIGYLFWTISDNW 511 (653)
Q Consensus 439 ~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~ad-------~~D~~Ri~YL~~hL~~v~~Ai~dGV~V~GY~~WSLlDNf 511 (653)
+|+|+||+.+|+++++||+ ++||+|||||++. .+|+.|+.||++||.+|++||++||||+||++|||+|||
T Consensus 366 ~i~P~Gl~~~L~~~~~rY~--~pPi~ITENG~~~~d~~~~~v~D~~Ri~Yl~~hL~~l~~Ai~dGv~V~GY~~WSl~Dnf 443 (503)
T PLN02849 366 AVAPWAMESVLEYIKQSYG--NPPVYILENGTPMKQDLQLQQKDTPRIEYLHAYIGAVLKAVRNGSDTRGYFVWSFMDLY 443 (503)
T ss_pred eEChHHHHHHHHHHHHhcC--CCCEEEeCCCCCccCCCCCcccCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchhhh
Confidence 9999999999999999997 4689999999983 358899999999999999999999999999999999999
Q ss_pred CCcCCCCCccceEEEcCCC-CccccccchHHHHHHHHHcCCCCc
Q 006261 512 EWADGYGPKFGLVAVDRAN-NLARIPRPSYHLFTKVVTTGKVTR 554 (653)
Q Consensus 512 EW~~GY~~RFGL~~VD~~~-~l~R~PK~Sa~wY~~ii~~~~i~~ 554 (653)
||.+||++|||||+||+++ +++|+||+|++||+++|++++.-.
T Consensus 444 EW~~Gy~~RfGLi~VD~~~~~~~R~pK~S~~wy~~ii~~~~~~~ 487 (503)
T PLN02849 444 ELLKGYEFSFGLYSVNFSDPHRKRSPKLSAHWYSAFLKGNSTFL 487 (503)
T ss_pred chhccccCccceEEECCCCCCcceecccHHHHHHHHHHhCCCCc
Confidence 9999999999999999986 479999999999999999987433
No 3
>TIGR01233 lacG 6-phospho-beta-galactosidase. This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation.
Probab=100.00 E-value=6.5e-99 Score=832.30 Aligned_cols=366 Identities=27% Similarity=0.470 Sum_probs=316.6
Q ss_pred CCCchhhhcccccccccCCCccccccCCCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHH
Q 006261 165 VPTENEEVHHKVTAWHNVPHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWII 244 (653)
Q Consensus 165 ~~~~~~~~~~~~~~~~n~~~~~~a~~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LI 244 (653)
.||+||.|+|+++.. +++.||+|||+|+|||+|||+||+++|||||+||||+|+| .|.+|++||+||++||
T Consensus 29 g~siwD~~~~~~~~~----~~~~a~d~yhry~eDi~L~~~lG~~~yRfSIsWsRI~P~g-----~~~~N~~gl~~Y~~li 99 (467)
T TIGR01233 29 GPVAWDKYLEDNYWY----TAEPASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFPTG-----YGEVNEKGVEFYHKLF 99 (467)
T ss_pred cCchhhccccCCCCC----CCCccCchhhhHHHHHHHHHHcCCCEEEEecchhhccCCC-----CCCcCHHHHHHHHHHH
Confidence 679999999876653 5789999999999999999999999999999999999986 3689999999999999
Q ss_pred HHHHHcCCeEEEEeccCCCCccccccCCCCChhhHHHHHHHHHHHHHHhcCccceEEEccCcceeeeccccCCCCCCCCC
Q 006261 245 NRVRSYGMKVMLTLFHHSLPAWAGEYGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCMLTYCAGTWPGGNP 324 (653)
Q Consensus 245 d~L~~~GIePiVTL~HwDLP~wL~~~GGW~n~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v~~~~GY~~G~~PPG~~ 324 (653)
++|+++||+|||||||||||+||+++|||+|++++++|++||++||++||| ||+|+|||||++++..||+.|.+|||..
T Consensus 100 d~l~~~GI~P~VTL~H~dlP~~L~~~GGW~n~~~v~~F~~YA~~~f~~fgd-Vk~WiT~NEP~~~~~~gy~~G~~~Pg~~ 178 (467)
T TIGR01233 100 AECHKRHVEPFVTLHHFDTPEALHSNGDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPGIK 178 (467)
T ss_pred HHHHHcCCEEEEeccCCCCcHHHHHcCCCCCHHHHHHHHHHHHHHHHHhCC-CCEEEEecchhhhhhccchhcccCCCcc
Confidence 999999999999999999999999999999999999999999999999998 9999999999999999999999999853
Q ss_pred chhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeecccccCCC---cccHHHHHHHhhcc------
Q 006261 325 DMLEVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSTSTKSKVGVAHHVSFMRPYG---LFDVTAVTLANTLT------ 395 (653)
Q Consensus 325 ~~~~~~~~~~~~~~~~~a~h~LLlAHa~Ay~~ir~~~~~~~g~IGi~~~~~~~~P~~---~~D~~aa~~~n~l~------ 395 (653)
... .. ..+++||+++||++||++||+.. ++++||++++..+++|.+ +.|+.++.+.+.+.
T Consensus 179 ~~~--------~~-~~~a~hn~l~AHa~A~~~~~~~~--~~~~IGi~~~~~~~~P~~~~~~~D~~aA~~~~~~~~~~f~d 247 (467)
T TIGR01233 179 YDL--------AK-VFQSHHNMMVSHARAVKLYKDKG--YKGEIGVVHALPTKYPYDPENPADVRAAELEDIIHNKFILD 247 (467)
T ss_pred chh--------HH-HHHHHHHHHHHHHHHHHHHHHhC--CCCeEEEEecCceeEECCCCCHHHHHHHHHHHHHhhhcccc
Confidence 210 11 34899999999999999999874 478999999999999976 56888876443211
Q ss_pred -----CCcc-----------------------cccc---CCCcceeEeeccCCceeeCC--C-----------------C
Q 006261 396 -----TFPY-----------------------VDSI---SDRLDFIGINYYGQEVVSGP--G-----------------L 425 (653)
Q Consensus 396 -----~~p~-----------------------~d~I---~~s~DFiGINYYt~~~V~~~--g-----------------~ 425 (653)
.+|. .+.| ++++||||||||++.+|+.. + .
T Consensus 248 ~~~~G~Yp~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~~DFlGinyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 327 (467)
T TIGR01233 248 ATYLGHYSDKTMEGVNHILAENGGELDLRDEDFQALDAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQI 327 (467)
T ss_pred hhhCCCCCHHHHHHHHhhhhccCCCCCCCHHHHHHHhccCCCCCEEEEccccceeeccCCCccccccCCccccCcccccC
Confidence 0110 0113 47889999999999988641 0 0
Q ss_pred cc-----cC-CCCCcCCCCccCchHHHHHHHHHHHHhCCCCCCEEEeecCCCC--------CCCcccHHHHHHHHHHHHH
Q 006261 426 KL-----VE-TDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSD--------ETDLIRRPYVIEHLLAVYA 491 (653)
Q Consensus 426 ~~-----~~-~~~~s~~Gw~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~ad--------~~D~~Ri~YL~~hL~~v~~ 491 (653)
.. .+ +.+.+.+||+|+|+||+.+|++++++|+. .+||||||||++. .+|+.|+.||++||.+|++
T Consensus 328 ~~~~~~~~~~~~~~t~~gw~i~P~Gl~~~L~~~~~~Y~~-~ppi~ItENG~~~~d~~~~g~i~D~~Ri~Yl~~hl~~~~~ 406 (467)
T TIGR01233 328 KGVGRRVAPDYVPRTDWDWIIYPEGLYDQIMRVKNDYPN-YKKIYITENGLGYKDEFVDNTVYDDGRIDYVKQHLEVLSD 406 (467)
T ss_pred CCcccccCCCCCCcCCCCCeeChHHHHHHHHHHHHHcCC-CCCEEEeCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHH
Confidence 00 00 11346789999999999999999999972 1479999999984 2488999999999999999
Q ss_pred HHHcCCCeeEEEEeecccccCCcCCCCCccceEEEcCCCCccccccchHHHHHHHHHcCCCC
Q 006261 492 AMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTTGKVT 553 (653)
Q Consensus 492 Ai~dGV~V~GY~~WSLlDNfEW~~GY~~RFGL~~VD~~~~l~R~PK~Sa~wY~~ii~~~~i~ 553 (653)
||++||||+||++|||+|||||.+||++||||++||++ +++|+||+|++||+++|++++++
T Consensus 407 Ai~dGv~v~GY~~WSl~Dn~Ew~~Gy~~RfGLv~VD~~-t~~R~~K~S~~wy~~ii~~~~~~ 467 (467)
T TIGR01233 407 AIADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFD-TQERYPKKSAHWYKKLAETQVIE 467 (467)
T ss_pred HHHcCCCEEEEeeccchhhhchhccccCccceEEECCC-CCccccccHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999997 47999999999999999998874
No 4
>PLN02998 beta-glucosidase
Probab=100.00 E-value=1.1e-98 Score=834.56 Aligned_cols=375 Identities=26% Similarity=0.399 Sum_probs=316.5
Q ss_pred CCCchhhhcccccccccC-CCccccccCCCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHH
Q 006261 165 VPTENEEVHHKVTAWHNV-PHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWI 243 (653)
Q Consensus 165 ~~~~~~~~~~~~~~~~n~-~~~~~a~~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~L 243 (653)
-||+||.|+| ++ ..+ .+++.||+|||+|+|||+|||+||+++|||||+||||+|+| .|.+|++||+||++|
T Consensus 56 g~siwD~~~~-~~--~~~~~~~~~a~D~Yhry~EDi~lmk~lG~~~YRfSIsWsRI~P~G-----~g~vN~~gl~~Y~~l 127 (497)
T PLN02998 56 TPSIWDVFAH-AG--HSGVAAGNVACDQYHKYKEDVKLMADMGLEAYRFSISWSRLLPSG-----RGPINPKGLQYYNNL 127 (497)
T ss_pred ccchhhcccc-cC--cCCCCCCcccccHHHhhHHHHHHHHHcCCCeEEeeccHHhcCcCC-----CCCcCHHHHHHHHHH
Confidence 6799999988 33 233 47889999999999999999999999999999999999986 367999999999999
Q ss_pred HHHHHHcCCeEEEEeccCCCCccccc-cCCCCChhhHHHHHHHHHHHHHHhcCccceEEEccCcceeeeccccCCCCCCC
Q 006261 244 INRVRSYGMKVMLTLFHHSLPAWAGE-YGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCMLTYCAGTWPGG 322 (653)
Q Consensus 244 Id~L~~~GIePiVTL~HwDLP~wL~~-~GGW~n~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v~~~~GY~~G~~PPG 322 (653)
|++|+++||+|||||||||+|+||++ +|||+|++++++|++||++||++||||||+|+|||||++++..||..|.+|||
T Consensus 128 id~L~~~GIeP~VTL~H~dlP~~L~~~yGGW~n~~~v~~F~~YA~~~~~~fgdrVk~WiT~NEP~~~~~~gy~~G~~~Pg 207 (497)
T PLN02998 128 IDELITHGIQPHVTLHHFDLPQALEDEYGGWLSQEIVRDFTAYADTCFKEFGDRVSHWTTINEVNVFALGGYDQGITPPA 207 (497)
T ss_pred HHHHHHcCCceEEEecCCCCCHHHHHhhCCcCCchHHHHHHHHHHHHHHHhcCcCCEEEEccCcchhhhcchhhcccCCC
Confidence 99999999999999999999999987 59999999999999999999999999999999999999999999999999998
Q ss_pred CCchhh--hhhc-CCCchhHHHHHHHHHHHHHHHHHHHHhc-CCCCCCeEEEEeecccccCCC--cccHHHHHHHhhccC
Q 006261 323 NPDMLE--VATS-ALPTGVFNQAMHWMAIAHSKAYDYIHAK-STSTKSKVGVAHHVSFMRPYG--LFDVTAVTLANTLTT 396 (653)
Q Consensus 323 ~~~~~~--~~~~-~~~~~~~~~a~h~LLlAHa~Ay~~ir~~-~~~~~g~IGi~~~~~~~~P~~--~~D~~aa~~~n~l~~ 396 (653)
.+.... .+.. ...... .+++||+++||++||++||+. +..++++||++++..+++|.+ +.|+.++.+.+.+..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~-~~~~hn~llAHa~A~~~~~~~~~~~~~g~IGi~~~~~~~~P~~~~~~D~~aa~~~~~~~~ 286 (497)
T PLN02998 208 RCSPPFGLNCTKGNSSIEP-YIAVHNMLLAHASATILYKQQYKYKQHGSVGISVYTYGAVPLTNSVKDKQATARVNDFYI 286 (497)
T ss_pred ccccccccccccccchHHH-HHHHHHHHHHHHHHHHHHHHhhccCCCCcEEEEEeCCeeecCCCCHHHHHHHHHHHHHHh
Confidence 633100 0000 001123 589999999999999999964 334678999999999999975 568887754432110
Q ss_pred -----------Cc------------c-----ccccCCCcceeEeeccCCceeeCCCCc--c-cC---C---------CCC
Q 006261 397 -----------FP------------Y-----VDSISDRLDFIGINYYGQEVVSGPGLK--L-VE---T---------DEY 433 (653)
Q Consensus 397 -----------~p------------~-----~d~I~~s~DFiGINYYt~~~V~~~g~~--~-~~---~---------~~~ 433 (653)
+| . .+.|++++||+|||||++.+|+..... . .. . ...
T Consensus 287 ~~f~dp~~~G~YP~~~~~~l~~~lp~~t~~d~~~i~~~~DFlGiNyYts~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (497)
T PLN02998 287 GWILHPLVFGDYPETMKTNVGSRLPAFTEEESEQVKGAFDFVGVINYMALYVKDNSSSLKPNLQDFNTDIAVEMTLVGNT 366 (497)
T ss_pred hhhhhHHhCCCcCHHHHHHHhcCCCCCCHHHHHHhcCCCCEEEEchhcCcccccCCCcCCCCccccccccccccccCCCc
Confidence 11 1 123678999999999999988642110 0 00 0 012
Q ss_pred c-CCCCccCchHHHHHHHHHHHHhCCCCCCEEEeecCCCCC-----CCcccHHHHHHHHHHHHHHHHcCCCeeEEEEeec
Q 006261 434 S-ESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDE-----TDLIRRPYVIEHLLAVYAAMITGVPVIGYLFWTI 507 (653)
Q Consensus 434 s-~~Gw~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~ad~-----~D~~Ri~YL~~hL~~v~~Ai~dGV~V~GY~~WSL 507 (653)
+ .+||+++|+||+.+|+++++||+ ++||+|||||+++. +|+.|+.||++||.+|++||++||||+|||+|||
T Consensus 367 ~~~~~w~i~P~Gl~~~L~~~~~rY~--~ppI~ITENG~~~~~~g~v~D~~Ri~Yl~~hl~~~~kAi~dGv~V~GY~~WSl 444 (497)
T PLN02998 367 SIENEYANTPWSLQQILLYVKETYG--NPPVYILENGQMTPHSSSLVDTTRVKYLSSYIKAVLHSLRKGSDVKGYFQWSL 444 (497)
T ss_pred CCCCCCEEChHHHHHHHHHHHHHcC--CCCEEEeCCCCccCCCCcccCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccc
Confidence 2 37899999999999999999997 46899999999853 4889999999999999999999999999999999
Q ss_pred ccccCCcCCCCCccceEEEcCCC-CccccccchHHHHHHHHHcC
Q 006261 508 SDNWEWADGYGPKFGLVAVDRAN-NLARIPRPSYHLFTKVVTTG 550 (653)
Q Consensus 508 lDNfEW~~GY~~RFGL~~VD~~~-~l~R~PK~Sa~wY~~ii~~~ 550 (653)
+|||||.+||++|||||+||++| +++|+||+|++||+++|+++
T Consensus 445 ~DnfEW~~Gy~~RfGLv~VD~~~~~~~R~pK~S~~wy~~ii~~~ 488 (497)
T PLN02998 445 MDVFELFGGYERSFGLLYVDFKDPSLKRSPKLSAHWYSSFLKGT 488 (497)
T ss_pred hhhhchhccccCccceEEECCCCCCcceecccHHHHHHHHHhcc
Confidence 99999999999999999999986 58999999999999999976
No 5
>PRK13511 6-phospho-beta-galactosidase; Provisional
Probab=100.00 E-value=5.1e-98 Score=826.01 Aligned_cols=364 Identities=29% Similarity=0.480 Sum_probs=316.9
Q ss_pred CCCchhhhcccccccccCCCccccccCCCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHH
Q 006261 165 VPTENEEVHHKVTAWHNVPHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWII 244 (653)
Q Consensus 165 ~~~~~~~~~~~~~~~~n~~~~~~a~~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LI 244 (653)
-||+||.|+|++++. +++.||+|||+|+|||+|||+||+++|||||+||||+|+| .|.+|++||+||++||
T Consensus 30 g~siwD~~~~~~~~~----~~~~a~d~Y~ry~eDi~L~~~lG~~~yRfSIsWsRI~P~G-----~g~vN~~gl~~Y~~li 100 (469)
T PRK13511 30 GPVAWDKYLEENYWF----TPDPASDFYHRYPEDLKLAEEFGVNGIRISIAWSRIFPDG-----YGEVNPKGVEYYHRLF 100 (469)
T ss_pred ccchhhcccccCCCC----CCCcccchhhhhHHHHHHHHHhCCCEEEeeccHhhcCcCC-----CCCcCHHHHHHHHHHH
Confidence 789999999988764 6899999999999999999999999999999999999986 3689999999999999
Q ss_pred HHHHHcCCeEEEEeccCCCCccccccCCCCChhhHHHHHHHHHHHHHHhcCccceEEEccCcceeeeccccCCCCCCCCC
Q 006261 245 NRVRSYGMKVMLTLFHHSLPAWAGEYGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCMLTYCAGTWPGGNP 324 (653)
Q Consensus 245 d~L~~~GIePiVTL~HwDLP~wL~~~GGW~n~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v~~~~GY~~G~~PPG~~ 324 (653)
++|+++||+|||||||||||+||+++|||+|++++++|++||++||++||| ||+|+|||||++++..||..|.+|||..
T Consensus 101 d~l~~~GI~P~VTL~H~dlP~~L~~~GGW~n~~~v~~F~~YA~~~~~~fgd-Vk~W~T~NEP~~~~~~gy~~G~~~Pg~~ 179 (469)
T PRK13511 101 AECHKRHVEPFVTLHHFDTPEALHSNGDWLNRENIDHFVRYAEFCFEEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPGIK 179 (469)
T ss_pred HHHHHcCCEEEEEecCCCCcHHHHHcCCCCCHHHHHHHHHHHHHHHHHhCC-CCEEEEccchhhhhhcchhhcccCCCCC
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999864
Q ss_pred chhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeecccccCCC---cccHHHHHHHhhccC-----
Q 006261 325 DMLEVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSTSTKSKVGVAHHVSFMRPYG---LFDVTAVTLANTLTT----- 396 (653)
Q Consensus 325 ~~~~~~~~~~~~~~~~~a~h~LLlAHa~Ay~~ir~~~~~~~g~IGi~~~~~~~~P~~---~~D~~aa~~~n~l~~----- 396 (653)
... .. ..+++||+++||++||++||+.. ++++||++++..+++|.+ +.|+.++.+.+.+.+
T Consensus 180 ~~~--------~~-~~~~~hn~llAHa~A~~~~~~~~--~~g~IGi~~~~~~~~P~~~~~~~d~~aa~~~~~~~~~~f~d 248 (469)
T PRK13511 180 YDL--------AK-VFQSHHNMMVAHARAVKLFKDKG--YKGEIGVVHALPTKYPIDPDNPEDVRAAELEDIIHNKFILD 248 (469)
T ss_pred ccH--------HH-HHHHHHHHHHHHHHHHHHHHHhC--CCCeEEEEecCceEeeCCCCCHHHHHHHHHHHHHhhhcccc
Confidence 210 11 35899999999999999999864 478999999999999976 578887765432111
Q ss_pred ------Ccc-----c------------------cccC---CCcceeEeeccCCceeeCCCC-------------------
Q 006261 397 ------FPY-----V------------------DSIS---DRLDFIGINYYGQEVVSGPGL------------------- 425 (653)
Q Consensus 397 ------~p~-----~------------------d~I~---~s~DFiGINYYt~~~V~~~g~------------------- 425 (653)
+|. + +.++ +++||||||||++.+|+....
T Consensus 249 p~~~G~Yp~~~~~~~~~~~~~~~~~l~~t~~d~~~ik~~~~~~DFiGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 328 (469)
T PRK13511 249 ATYLGYYSEETMEGVNHILEANGGSLDIRDEDFEILKAAKDLNDFLGINYYMSDWMRAYDGETEIIHNGTGEKGSSKYQL 328 (469)
T ss_pred hhhCCCCCHHHHHHHHHhhhhcCCCCCCCHHHHHHHhcCCCCCCEEEechhhcceeecCCCccccccCCCCccccccccc
Confidence 110 0 1122 468999999999998864100
Q ss_pred cc----cC--CCCCcCCCCccCchHHHHHHHHHHHHhCCCC-CCEEEeecCCCC---------CCCcccHHHHHHHHHHH
Q 006261 426 KL----VE--TDEYSESGRGVYPDGLFRVLHQFHERYKHLN-LPFIITENGVSD---------ETDLIRRPYVIEHLLAV 489 (653)
Q Consensus 426 ~~----~~--~~~~s~~Gw~i~P~GL~~lL~~i~~rY~~~~-~PI~ITENG~ad---------~~D~~Ri~YL~~hL~~v 489 (653)
.. .. +.+.+.+||+|+|+||+.+|++++++|+ + +||||||||++. .+|..|+.||++||.+|
T Consensus 329 ~~~~~~~~~~~~~~~~~gw~i~P~Gl~~~l~~~~~~Y~--~~~pi~ITENG~~~~d~~~~~~~~~D~~Ri~yl~~hl~~~ 406 (469)
T PRK13511 329 KGVGERVKPPDVPTTDWDWIIYPQGLYDQLMRIKKDYP--NYKKIYITENGLGYKDEFVDGKTVDDDKRIDYVKQHLEVI 406 (469)
T ss_pred cCccccccCCCCCcCCCCCeECcHHHHHHHHHHHHHcC--CCCCEEEecCCcCCCCCcCCCCccCCHHHHHHHHHHHHHH
Confidence 00 01 1134678999999999999999999997 4 589999999982 24889999999999999
Q ss_pred HHHHHcCCCeeEEEEeecccccCCcCCCCCccceEEEcCCCCccccccchHHHHHHHHHcCCC
Q 006261 490 YAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTTGKV 552 (653)
Q Consensus 490 ~~Ai~dGV~V~GY~~WSLlDNfEW~~GY~~RFGL~~VD~~~~l~R~PK~Sa~wY~~ii~~~~i 552 (653)
++||++||||+||++|||+|||||.+||++||||++||+++ ++|+||+|++||+++|++++|
T Consensus 407 ~~Ai~dGv~v~GY~~WSl~DnfEW~~Gy~~RfGl~~VD~~~-~~R~pK~S~~wy~~~i~~~~~ 468 (469)
T PRK13511 407 SDAISDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFET-QERYPKKSAYWYKKLAETKVI 468 (469)
T ss_pred HHHHHcCCCEEEEeecccccccchhcCccCccceEEECCCc-CccccccHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999975 799999999999999999886
No 6
>PLN02814 beta-glucosidase
Probab=100.00 E-value=6.4e-98 Score=829.65 Aligned_cols=377 Identities=26% Similarity=0.390 Sum_probs=320.4
Q ss_pred CCCchhhhcccccccccCCCccccccCCCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHH
Q 006261 165 VPTENEEVHHKVTAWHNVPHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWII 244 (653)
Q Consensus 165 ~~~~~~~~~~~~~~~~n~~~~~~a~~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LI 244 (653)
.||+||.|+|. .++.+++.||+|||+|+|||+|||+||+++|||||+||||+|+| .|.+|++||+||++||
T Consensus 53 g~siwD~~~~~----~~~~~~~~a~D~Yhry~EDI~L~k~lG~~ayRfSIsWsRI~P~G-----~g~~N~~Gl~fY~~lI 123 (504)
T PLN02814 53 TPSVWDTTSHC----YNGGNGDIASDGYHKYKEDVKLMAEMGLESFRFSISWSRLIPNG-----RGLINPKGLLFYKNLI 123 (504)
T ss_pred ccchhheeeec----cCCCCCCccccHHHhhHHHHHHHHHcCCCEEEEeccHhhcCcCC-----CCCCCHHHHHHHHHHH
Confidence 78999999983 34568899999999999999999999999999999999999986 3789999999999999
Q ss_pred HHHHHcCCeEEEEeccCCCCccccc-cCCCCChhhHHHHHHHHHHHHHHhcCccceEEEccCcceeeeccccCCCCCCCC
Q 006261 245 NRVRSYGMKVMLTLFHHSLPAWAGE-YGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCMLTYCAGTWPGGN 323 (653)
Q Consensus 245 d~L~~~GIePiVTL~HwDLP~wL~~-~GGW~n~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v~~~~GY~~G~~PPG~ 323 (653)
|+|+++||+|||||||||||+||++ +|||+|++++++|++||++||++|||+||+|+|||||++++..||..|.. ||.
T Consensus 124 d~l~~~GI~P~VTL~H~dlP~~L~~~yGGW~n~~~i~~F~~YA~~~f~~fgdrVk~WiT~NEP~~~~~~gy~~G~~-pg~ 202 (504)
T PLN02814 124 KELRSHGIEPHVTLYHYDLPQSLEDEYGGWINRKIIEDFTAFADVCFREFGEDVKLWTTINEATIFAIGSYGQGIR-YGH 202 (504)
T ss_pred HHHHHcCCceEEEecCCCCCHHHHHhcCCcCChhHHHHHHHHHHHHHHHhCCcCCEEEeccccchhhhcccccCcC-CCC
Confidence 9999999999999999999999987 59999999999999999999999999999999999999999999999985 654
Q ss_pred Cchh---hhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhc-CCCCCCeEEEEeecccccCCC--cccHHHHHHHhhccC-
Q 006261 324 PDML---EVATSALPTGVFNQAMHWMAIAHSKAYDYIHAK-STSTKSKVGVAHHVSFMRPYG--LFDVTAVTLANTLTT- 396 (653)
Q Consensus 324 ~~~~---~~~~~~~~~~~~~~a~h~LLlAHa~Ay~~ir~~-~~~~~g~IGi~~~~~~~~P~~--~~D~~aa~~~n~l~~- 396 (653)
++.. .........+. .+++||+++||++||++||+. +..++++||++++..+++|++ +.|+.|+.+++.+..
T Consensus 203 ~~~~~~~~~~~~~~~~~~-~~a~hn~llAHa~Av~~~~~~~~~~~~g~IGi~~~~~~~~P~~~~~~D~~Aa~~~~~~~~~ 281 (504)
T PLN02814 203 CSPNKFINCSTGNSCTET-YIAGHNMLLAHASASNLYKLKYKSKQRGSIGLSIFAFGLSPYTNSKDDEIATQRAKAFLYG 281 (504)
T ss_pred CCcccccccccCcchHHH-HHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCceeecCCCCHHHHHHHHHHHHHhhh
Confidence 3310 00000011233 489999999999999999964 334678999999999999985 568888765442211
Q ss_pred ----------Cc------------c-----ccccCCCcceeEeeccCCceeeCCC-C-------cc---------cCCCC
Q 006261 397 ----------FP------------Y-----VDSISDRLDFIGINYYGQEVVSGPG-L-------KL---------VETDE 432 (653)
Q Consensus 397 ----------~p------------~-----~d~I~~s~DFiGINYYt~~~V~~~g-~-------~~---------~~~~~ 432 (653)
+| . .+.|++++||||||||++.+|+..+ . .. .+..+
T Consensus 282 ~f~dp~~~G~YP~~~~~~l~~~lp~~~~~d~~~ikg~~DFiGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (504)
T PLN02814 282 WMLKPLVFGDYPDEMKRTLGSRLPVFSEEESEQVKGSSDFVGIIHYTTFYVTNRPAPSIFPSMNEGFFTDMGAYIISAGN 361 (504)
T ss_pred hhhHHHhCCCccHHHHHHHhcCCCCCCHHHHHHhcCCCCEEEEcccccceeccCCCCCcccccCCCcccccccccCCCCC
Confidence 11 1 1236789999999999999886321 0 00 01124
Q ss_pred CcCCCCccCchHHHHHHHHHHHHhCCCCCCEEEeecCCCC-----CCCcccHHHHHHHHHHHHHHHHcCCCeeEEEEeec
Q 006261 433 YSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSD-----ETDLIRRPYVIEHLLAVYAAMITGVPVIGYLFWTI 507 (653)
Q Consensus 433 ~s~~Gw~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~ad-----~~D~~Ri~YL~~hL~~v~~Ai~dGV~V~GY~~WSL 507 (653)
.+++||+|||+||+.+|+++++||+ ++||+|||||++. .+|..|+.||++||.+|++||++||||+||++|||
T Consensus 362 ~~~~gWei~P~Gl~~~L~~~~~rY~--~ppI~ITENG~~~~~~g~i~D~~Ri~Yl~~hl~~l~~Ai~dGv~V~GY~~WSl 439 (504)
T PLN02814 362 SSFFEFDATPWGLEGILEHIKQSYN--NPPIYILENGMPMKHDSTLQDTPRVEFIQAYIGAVLNAIKNGSDTRGYFVWSM 439 (504)
T ss_pred cCCCCCeECcHHHHHHHHHHHHhcC--CCCEEEECCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccc
Confidence 6678999999999999999999997 4689999999972 45889999999999999999999999999999999
Q ss_pred ccccCCcCCCCCccceEEEcCCC-CccccccchHHHHHHHHHcCCCCc
Q 006261 508 SDNWEWADGYGPKFGLVAVDRAN-NLARIPRPSYHLFTKVVTTGKVTR 554 (653)
Q Consensus 508 lDNfEW~~GY~~RFGL~~VD~~~-~l~R~PK~Sa~wY~~ii~~~~i~~ 554 (653)
||||||.+||++||||||||++| +++|+||+|++||+++|++...+.
T Consensus 440 lDnfEW~~Gy~~RfGLvyVD~~~~~~~R~pK~S~~wy~~~i~~~~~~~ 487 (504)
T PLN02814 440 IDLYELLGGYTTSFGMYYVNFSDPGRKRSPKLSASWYTGFLNGTIDVA 487 (504)
T ss_pred hhhhchhccccCccceEEECCCCCCcceeeecHHHHHHHHHhcCCChh
Confidence 99999999999999999999987 579999999999999999876654
No 7
>PRK09589 celA 6-phospho-beta-glucosidase; Reviewed
Probab=100.00 E-value=1.5e-96 Score=814.97 Aligned_cols=369 Identities=25% Similarity=0.427 Sum_probs=309.2
Q ss_pred CCCchhhhc---c-cccccc----cC--CCccccccCCCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCCh
Q 006261 165 VPTENEEVH---H-KVTAWH----NV--PHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNF 234 (653)
Q Consensus 165 ~~~~~~~~~---~-~~~~~~----n~--~~~~~a~~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~ 234 (653)
-||+||.|+ | .++++. .+ ++++.||+|||+|+|||+|||+||+++|||||+||||+|+|. .+.+|+
T Consensus 29 g~siwD~~~~~~~~~~~~~~~~~~~~~~~~~~~a~D~Yhry~eDi~Lm~~lG~~~yRfSIsWsRI~P~G~----~~~~N~ 104 (476)
T PRK09589 29 GISVADVMTAGAHGVPREITEGVIEGKNYPNHEAIDFYHRYKEDIALFAEMGFKCFRTSIAWTRIFPQGD----ELEPNE 104 (476)
T ss_pred CCchhcccccccccCccccccCccCCCcCCCcccccHHHhhHHHHHHHHHcCCCEEEeccchhhcCcCCC----CCCCCH
Confidence 678999988 4 355542 12 257889999999999999999999999999999999999862 356999
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccc-cCCCCChhhHHHHHHHHHHHHHHhcCccceEEEccCcceeeec-
Q 006261 235 AALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGE-YGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCML- 312 (653)
Q Consensus 235 ~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~-~GGW~n~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v~~~~- 312 (653)
+||+||++||++|+++||+|||||||||||+||++ +|||+|++++++|++||++||++|||+||+|+|||||++++..
T Consensus 105 ~gl~~Y~~lid~L~~~GI~P~VTL~H~dlP~~L~~~yGGW~n~~~i~~F~~YA~~~f~~fgdrVk~WiT~NEp~~~~~~~ 184 (476)
T PRK09589 105 EGLQFYDDLFDECLKQGIEPVVTLSHFEMPYHLVTEYGGWRNRKLIDFFVRFAEVVFTRYKDKVKYWMTFNEINNQANFS 184 (476)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEecCCCCCHHHHHhcCCcCChHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhhhccc
Confidence 99999999999999999999999999999999986 5999999999999999999999999999999999999998776
Q ss_pred ----ccc-CCC-CCCCCCchhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeecccccCCC--ccc
Q 006261 313 ----TYC-AGT-WPGGNPDMLEVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSTSTKSKVGVAHHVSFMRPYG--LFD 384 (653)
Q Consensus 313 ----GY~-~G~-~PPG~~~~~~~~~~~~~~~~~~~a~h~LLlAHa~Ay~~ir~~~~~~~g~IGi~~~~~~~~P~~--~~D 384 (653)
||. .|. +|||... . ...++++||+++||++|+++||+..+ +++||++++..+++|.+ +.|
T Consensus 185 ~~~~~~~~~g~~~~pg~~~---------~-~~~~~~~h~~llAha~A~~~~~~~~~--~~~iG~~~~~~~~~P~~~~~~d 252 (476)
T PRK09589 185 EDFAPFTNSGILYSPGEDR---------E-QIMYQAAHYELVASALAVKTGHEINP--DFQIGCMIAMCPIYPLTCAPND 252 (476)
T ss_pred cccCCccccccccCCCCch---------h-HHHHHHHHHHHHHHHHHHHHHHHhCC--CCcEEEEEeCCeeeeCCCCHHH
Confidence 444 444 3555311 1 12358999999999999999998754 67999999999999975 568
Q ss_pred HHHHHHHhhccC----------Cc--------------cc-----ccc-CCCcceeEeeccCCceeeCC--CC-------
Q 006261 385 VTAVTLANTLTT----------FP--------------YV-----DSI-SDRLDFIGINYYGQEVVSGP--GL------- 425 (653)
Q Consensus 385 ~~aa~~~n~l~~----------~p--------------~~-----d~I-~~s~DFiGINYYt~~~V~~~--g~------- 425 (653)
+.++.+++.+.. +| .+ +.+ ++++||||||||++.+|+.. ..
T Consensus 253 ~~aa~~~~~~~~~f~d~~~~G~YP~~~~~~~~~~~~~~~~t~~d~~~l~~g~~DFlGiNyYts~~v~~~~~~~~~~~~~~ 332 (476)
T PRK09589 253 MMMATKAMHRRYWFTDVHVRGYYPQHILNYFARKGFNLDITPEDNAILAEGCVDYIGFSYYMSFATKFHEDNPQLDYVET 332 (476)
T ss_pred HHHHHHHHHhccceecceeCCCCcHHHHHHHHhcCCCCCCCHHHHHHHhcCCCCEEEEecccCcccccCCCCCCCCcccc
Confidence 887765432110 11 00 123 58899999999999988631 00
Q ss_pred -cccCCC--CCcCCCCccCchHHHHHHHHHHHHhCCCCCCEEEeecCCCC---------CCCcccHHHHHHHHHHHHHHH
Q 006261 426 -KLVETD--EYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSD---------ETDLIRRPYVIEHLLAVYAAM 493 (653)
Q Consensus 426 -~~~~~~--~~s~~Gw~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~ad---------~~D~~Ri~YL~~hL~~v~~Ai 493 (653)
..++++ +.+++||+|+|+||+.+|++++++|+ +||||||||++. .+|..|+.||++||.+|++||
T Consensus 333 ~~~~~~~~~~~~~~gw~i~P~Gl~~~L~~~~~~Y~---~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~Yl~~hl~~~~~Ai 409 (476)
T PRK09589 333 RDLVSNPYVKASEWGWQIDPAGLRYSLNWFWDHYQ---LPLFIVENGFGAIDQREADGTVNDHYRIDYLAAHIREMKKAV 409 (476)
T ss_pred cccccCCCcccCCCCCccCcHHHHHHHHHHHHhcC---CCEEEEeCCcccCCCCCcCCcccCHHHHHHHHHHHHHHHHHH
Confidence 011122 45679999999999999999999996 689999999983 248899999999999999999
Q ss_pred -HcCCCeeEEEEeecccccCCcCC-CCCccceEEEcCCC----CccccccchHHHHHHHHHcCCC
Q 006261 494 -ITGVPVIGYLFWTISDNWEWADG-YGPKFGLVAVDRAN----NLARIPRPSYHLFTKVVTTGKV 552 (653)
Q Consensus 494 -~dGV~V~GY~~WSLlDNfEW~~G-Y~~RFGL~~VD~~~----~l~R~PK~Sa~wY~~ii~~~~i 552 (653)
++||||+|||+|||+|||||.+| |++|||||+||++| +++|+||+|++||+++|++++.
T Consensus 410 ~~dGv~V~GY~~WSl~Dn~Ew~~G~y~~RfGlv~VD~~~~~~~t~~R~pK~S~~wy~~~i~~ng~ 474 (476)
T PRK09589 410 VEDGVDLMGYTPWGCIDLVSAGTGEMKKRYGFIYVDKDNEGKGTLERSRKKSFYWYRDVIANNGE 474 (476)
T ss_pred HhcCCCeEEEeeccccccccccCCccccceeeEEEcCCCCCCcccccccccHHHHHHHHHHhcCC
Confidence 89999999999999999999999 99999999999986 4799999999999999988764
No 8
>PRK09593 arb 6-phospho-beta-glucosidase; Reviewed
Probab=100.00 E-value=2.4e-96 Score=813.66 Aligned_cols=370 Identities=26% Similarity=0.441 Sum_probs=314.5
Q ss_pred CCCchhhhcccccccc--c----------C--CCccccccCCCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCC
Q 006261 165 VPTENEEVHHKVTAWH--N----------V--PHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKE 230 (653)
Q Consensus 165 ~~~~~~~~~~~~~~~~--n----------~--~~~~~a~~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G 230 (653)
-||+||.|+|.++++. + + ++++.||+|||+|+|||+|||+||+++|||||+||||+|+| ..|
T Consensus 31 g~siwD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~d~Yhry~eDi~Lm~~lG~~aYRfSIsWsRI~P~G----~~~ 106 (478)
T PRK09593 31 GLANVDVVPIGEDRFPIITGEKKMFDFEEGYFYPAKEAIDMYHHYKEDIALFAEMGFKTYRMSIAWTRIFPKG----DEL 106 (478)
T ss_pred ccchhhccccCcCcccccccccccccccccccCCCCcccchHHhhHHHHHHHHHcCCCEEEEecchhhcccCC----CCC
Confidence 7899999999877651 1 1 26889999999999999999999999999999999999985 235
Q ss_pred cCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccc-cCCCCChhhHHHHHHHHHHHHHHhcCccceEEEccCccee
Q 006261 231 TVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGE-YGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVF 309 (653)
Q Consensus 231 ~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~-~GGW~n~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v~ 309 (653)
.+|++||+||++|||+|+++||+|||||||||||+||++ +|||+|++++++|++||++||++|||+|++|+|||||+++
T Consensus 107 ~~N~~gl~~Y~~lId~L~~~GI~P~VTL~H~dlP~~L~~~~GGW~n~~~v~~F~~YA~~~~~~fgdrVk~WiT~NEP~~~ 186 (478)
T PRK09593 107 EPNEAGLQFYEDIFKECHKYGIEPLVTITHFDCPMHLIEEYGGWRNRKMVGFYERLCRTLFTRYKGLVKYWLTFNEINMI 186 (478)
T ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEEEecccCCCHHHHhhcCCCCChHHHHHHHHHHHHHHHHhcCcCCEEEeecchhhh
Confidence 699999999999999999999999999999999999986 6999999999999999999999999999999999999999
Q ss_pred eecccc-CCCC-CCCCCchhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeecccccCCC--cccH
Q 006261 310 CMLTYC-AGTW-PGGNPDMLEVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSTSTKSKVGVAHHVSFMRPYG--LFDV 385 (653)
Q Consensus 310 ~~~GY~-~G~~-PPG~~~~~~~~~~~~~~~~~~~a~h~LLlAHa~Ay~~ir~~~~~~~g~IGi~~~~~~~~P~~--~~D~ 385 (653)
+..||. .|.+ |||.... ...++|+||+++||++||++||+.. ++++||++++..+++|.+ +.|+
T Consensus 187 ~~~~~~~~g~~~~~g~~~~----------~~~~~a~h~~llAHa~A~~~~~~~~--~~g~VGi~~~~~~~~P~~~~~~D~ 254 (478)
T PRK09593 187 LHAPFMGAGLYFEEGENKE----------QVKYQAAHHELVASAIATKIAHEVD--PENKVGCMLAAGQYYPNTCHPEDV 254 (478)
T ss_pred hcccccccCcccCCCCchh----------hhHHHHHHHHHHHHHHHHHHHHHhC--CCCeEEEEEeCCeeEeCCCCHHHH
Confidence 988886 5543 6653211 1235899999999999999999864 478999999999999975 5688
Q ss_pred HHHHHHhhcc----------CCc--------------c-----cccc-CCCcceeEeeccCCceeeCCCC----------
Q 006261 386 TAVTLANTLT----------TFP--------------Y-----VDSI-SDRLDFIGINYYGQEVVSGPGL---------- 425 (653)
Q Consensus 386 ~aa~~~n~l~----------~~p--------------~-----~d~I-~~s~DFiGINYYt~~~V~~~g~---------- 425 (653)
.|+.+.+.+. .+| . .+.| ++++||||||||++.+|+....
T Consensus 255 ~aa~~~~~~~~~fld~~~~G~YP~~~~~~~~~~~~~~~~~~~d~~~ik~g~~DFlGiNyYt~~~v~~~~~~~~~~~~~~~ 334 (478)
T PRK09593 255 WAAMKEDRENYFFIDVQARGEYPNYAKKRFEREGITIEMTEEDLELLKENTVDFISFSYYSSRVASGDPKVNEKTAGNIF 334 (478)
T ss_pred HHHHHHHHHhhhhhhhhhCCCccHHHHHHHHhcCCCCCCCHHHHHHHhcCCCCEEEEecccCcccccCCCCCCCCCCCcc
Confidence 7775432111 011 0 0124 3899999999999999874210
Q ss_pred cccCCC--CCcCCCCccCchHHHHHHHHHHHHhCCCCCCEEEeecCCCC---------CCCcccHHHHHHHHHHHHHHHH
Q 006261 426 KLVETD--EYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSD---------ETDLIRRPYVIEHLLAVYAAMI 494 (653)
Q Consensus 426 ~~~~~~--~~s~~Gw~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~ad---------~~D~~Ri~YL~~hL~~v~~Ai~ 494 (653)
....++ +.+++||+|+|+||+.+|+++++||+ .||||||||++. .+|+.|+.||++||.+|++||+
T Consensus 335 ~~~~~p~~~~~~~gw~i~P~Gl~~~l~~~~~~Y~---~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~yl~~hl~~~~~Ai~ 411 (478)
T PRK09593 335 ASLKNPYLKASEWGWQIDPLGLRITLNTIWDRYQ---KPMFIVENGLGAVDKPDENGYVEDDYRIDYLAAHIKAMRDAIN 411 (478)
T ss_pred ccccCCCcccCCCCCEECHHHHHHHHHHHHHHcC---CCEEEEcCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 001111 35779999999999999999999996 589999999983 2488899999999999999995
Q ss_pred -cCCCeeEEEEeecccccCCcCC-CCCccceEEEcCCC----CccccccchHHHHHHHHHcCCCC
Q 006261 495 -TGVPVIGYLFWTISDNWEWADG-YGPKFGLVAVDRAN----NLARIPRPSYHLFTKVVTTGKVT 553 (653)
Q Consensus 495 -dGV~V~GY~~WSLlDNfEW~~G-Y~~RFGL~~VD~~~----~l~R~PK~Sa~wY~~ii~~~~i~ 553 (653)
+||||+||++|||+|||||.+| |++|||||+||+++ +++|+||+|++||+++|++++.+
T Consensus 412 ~dGv~v~GY~~WSl~Dn~EW~~G~y~~RfGl~~VD~~~~~~~~~~R~pK~S~~wy~~ii~~~~~~ 476 (478)
T PRK09593 412 EDGVELLGYTTWGCIDLVSAGTGEMKKRYGFIYVDRDNEGKGTLKRSKKKSFDWYKKVIASNGED 476 (478)
T ss_pred HcCCCEEEEeeccchHhhcccCCCccCeeceEEECCCCCCCcccceecccHHHHHHHHHHhCCcC
Confidence 9999999999999999999999 99999999999986 58999999999999999987764
No 9
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A ....
Probab=100.00 E-value=1.5e-97 Score=819.89 Aligned_cols=370 Identities=34% Similarity=0.618 Sum_probs=312.7
Q ss_pred CCCchhhhcccccccccCCCccccccCCCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHH
Q 006261 165 VPTENEEVHHKVTAWHNVPHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWII 244 (653)
Q Consensus 165 ~~~~~~~~~~~~~~~~n~~~~~~a~~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LI 244 (653)
.||+||.|+|.++.+.++.+++.||+|||+|+|||+|||+||+++|||||+|+||+|+| ..|.+|++|++||+++|
T Consensus 30 g~s~wd~~~~~~~~~~~~~~~~~a~d~y~~y~eDi~l~~~lg~~~yRfsi~W~Ri~P~g----~~g~~n~~~~~~Y~~~i 105 (455)
T PF00232_consen 30 GPSIWDTFCHEPGKVEDGSTGDVACDHYHRYKEDIALMKELGVNAYRFSISWSRIFPDG----FEGKVNEEGLDFYRDLI 105 (455)
T ss_dssp TTBHHHHHHHSTTSSTTSSSSSSTTGHHHHHHHHHHHHHHHT-SEEEEE--HHHHSTTS----SSSSS-HHHHHHHHHHH
T ss_pred CcccccccccccceeeccccCcccccchhhhhHHHHHHHhhccceeeeecchhheeecc----cccccCHhHhhhhHHHH
Confidence 58999999999999999999999999999999999999999999999999999999985 35899999999999999
Q ss_pred HHHHHcCCeEEEEeccCCCCccccccCCCCChhhHHHHHHHHHHHHHHhcCccceEEEccCcceeeeccccCCCCCCCCC
Q 006261 245 NRVRSYGMKVMLTLFHHSLPAWAGEYGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCMLTYCAGTWPGGNP 324 (653)
Q Consensus 245 d~L~~~GIePiVTL~HwDLP~wL~~~GGW~n~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v~~~~GY~~G~~PPG~~ 324 (653)
++|+++||+|||||||||+|+||+++|||+|++++++|++||++||++|||+|++|+|||||++++..||..|.+|||..
T Consensus 106 ~~l~~~gi~P~vtL~H~~~P~~l~~~ggw~~~~~~~~F~~Ya~~~~~~~gd~V~~w~T~NEp~~~~~~~y~~g~~~p~~~ 185 (455)
T PF00232_consen 106 DELLENGIEPIVTLYHFDLPLWLEDYGGWLNRETVDWFARYAEFVFERFGDRVKYWITFNEPNVFALLGYLYGGFPPGRD 185 (455)
T ss_dssp HHHHHTT-EEEEEEESS--BHHHHHHTGGGSTHHHHHHHHHHHHHHHHHTTTBSEEEEEETHHHHHHHHHTSSSSTTCSS
T ss_pred HHHHhhccceeeeeeecccccceeecccccCHHHHHHHHHHHHHHHHHhCCCcceEEeccccceeecccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999965
Q ss_pred chhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeecccccCCCc--ccH-HHHHHHhhcc------
Q 006261 325 DMLEVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSTSTKSKVGVAHHVSFMRPYGL--FDV-TAVTLANTLT------ 395 (653)
Q Consensus 325 ~~~~~~~~~~~~~~~~~a~h~LLlAHa~Ay~~ir~~~~~~~g~IGi~~~~~~~~P~~~--~D~-~aa~~~n~l~------ 395 (653)
+.. ...+++|||++||++||++||+.. ++++||++++..+++|.+. .|. .|+.+.+.+.
T Consensus 186 ~~~----------~~~~~~h~~l~AHa~A~~~~~~~~--~~~~IGi~~~~~~~~P~~~~~~d~~~Aa~~~~~~~n~~f~d 253 (455)
T PF00232_consen 186 SLK----------AFYQAAHNLLLAHAKAVKAIKEKY--PDGKIGIALNFSPFYPLSPSPEDDVAAAERADEFHNGWFLD 253 (455)
T ss_dssp THH----------HHHHHHHHHHHHHHHHHHHHHHHT--CTSEEEEEEEEEEEEESSSSHHHHHHHHHHHHHHHTHHHHH
T ss_pred ccc----------hhhHHHhhHHHHHHHHHHHHhhcc--cceEEeccccccccCCCCccchhhHHHHHHHHHHhhccccc
Confidence 432 235899999999999999999876 4799999999999999863 333 5554432211
Q ss_pred -----CCc--------------c-----ccccCCCcceeEeeccCCceeeCCCCcc--------------c-CCCCCcCC
Q 006261 396 -----TFP--------------Y-----VDSISDRLDFIGINYYGQEVVSGPGLKL--------------V-ETDEYSES 436 (653)
Q Consensus 396 -----~~p--------------~-----~d~I~~s~DFiGINYYt~~~V~~~g~~~--------------~-~~~~~s~~ 436 (653)
.+| . .+.|++++||+|||||++.+|+...... . +..+.+++
T Consensus 254 pi~~G~YP~~~~~~~~~~~~lp~ft~ed~~~ikg~~DFlGiNYYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 333 (455)
T PF00232_consen 254 PIFKGDYPEEMKEYLGERGILPEFTEEDKELIKGSIDFLGINYYTSRYVRADPNPSSPPSYDSDAPFGQPYNPGGPTTDW 333 (455)
T ss_dssp HHHHSSSEHHHHHHHGGGTSSTTSGHHHHHHHTTTTSEEEEEESEEEEEEESSSSTSSTTHEEEESEEEECETSSEBCTT
T ss_pred CchhhcCChHHhhccccccccccccchhhhcccccchhhhhccccceeeccCccccccccccCCcccccccccccccccc
Confidence 111 1 1235899999999999999987543110 0 01235789
Q ss_pred CCccCchHHHHHHHHHHHHhCCCCCCEEEeecCCCCCC--------CcccHHHHHHHHHHHHHHHHcCCCeeEEEEeecc
Q 006261 437 GRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDET--------DLIRRPYVIEHLLAVYAAMITGVPVIGYLFWTIS 508 (653)
Q Consensus 437 Gw~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~ad~~--------D~~Ri~YL~~hL~~v~~Ai~dGV~V~GY~~WSLl 508 (653)
||.++|+||+++|++++++|+ ++||+|||||+++.+ |..|+.||++||.+|++||++||||+||++|||+
T Consensus 334 gw~i~P~Gl~~~L~~l~~~Y~--~~pI~ITENG~~~~~~~~~~~v~D~~Ri~yl~~hl~~v~~Ai~dGv~V~GY~~WSl~ 411 (455)
T PF00232_consen 334 GWEIYPEGLRDVLRYLKDRYG--NPPIYITENGIGDPDEVDDGKVDDDYRIDYLQDHLNQVLKAIEDGVNVRGYFAWSLL 411 (455)
T ss_dssp STBBETHHHHHHHHHHHHHHT--SSEEEEEEE---EETTCTTSHBSHHHHHHHHHHHHHHHHHHHHTT-EEEEEEEETSB
T ss_pred CcccccchHhhhhhhhccccC--CCcEEEecccccccccccccCcCcHHHHHHHHHHHHHHHhhhccCCCeeeEeeeccc
Confidence 999999999999999999998 599999999999643 7899999999999999999999999999999999
Q ss_pred cccCCcCCCCCccceEEEcCCCCccccccchHHHHHHHHHcCCC
Q 006261 509 DNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTTGKV 552 (653)
Q Consensus 509 DNfEW~~GY~~RFGL~~VD~~~~l~R~PK~Sa~wY~~ii~~~~i 552 (653)
|||||.+||++||||++||+.++++|+||+|++||+++|++|++
T Consensus 412 Dn~Ew~~Gy~~rfGl~~VD~~~~~~R~pK~S~~~y~~~i~~ng~ 455 (455)
T PF00232_consen 412 DNFEWAEGYKKRFGLVYVDFFDTLKRTPKKSAYWYKDFIRSNGF 455 (455)
T ss_dssp ---BGGGGGGSE--SEEEETTTTTEEEEBHHHHHHHHHHHHTEE
T ss_pred cccccccCccCccCceEEcCCCCcCeeeccHHHHHHHHHHhcCC
Confidence 99999999999999999997668999999999999999999864
No 10
>COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-96 Score=796.22 Aligned_cols=368 Identities=34% Similarity=0.604 Sum_probs=325.0
Q ss_pred CCCchhhhcc--cccccccCCCccccccCCCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHH
Q 006261 165 VPTENEEVHH--KVTAWHNVPHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKW 242 (653)
Q Consensus 165 ~~~~~~~~~~--~~~~~~n~~~~~~a~~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~ 242 (653)
-+|.||.+.+ -++.+..++.|++|++|||+|+|||+|||+||+++|||||+||||+|.+. .+.+|++||+||++
T Consensus 29 g~s~wD~~~~~~~~~~~~~~~~~~~a~d~YhrYkeDi~L~~emG~~~~R~SI~WsRIfP~g~----~~e~N~~gl~fY~~ 104 (460)
T COG2723 29 GPSDWDVWVHDEIPGRLVSGDPPEEASDFYHRYKEDIALAKEMGLNAFRTSIEWSRIFPNGD----GGEVNEKGLRFYDR 104 (460)
T ss_pred CCeeeeeeeccccCCcccCCCCCccccchhhhhHHHHHHHHHcCCCEEEeeeeEEEeecCCC----CCCcCHHHHHHHHH
Confidence 5799999999 58999999999999999999999999999999999999999999999862 34899999999999
Q ss_pred HHHHHHHcCCeEEEEeccCCCCcccccc-CCCCChhhHHHHHHHHHHHHHHhcCccceEEEccCcceeeeccccCCCCCC
Q 006261 243 IINRVRSYGMKVMLTLFHHSLPAWAGEY-GGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCMLTYCAGTWPG 321 (653)
Q Consensus 243 LId~L~~~GIePiVTL~HwDLP~wL~~~-GGW~n~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v~~~~GY~~G~~PP 321 (653)
|||+|+++||+|+|||||||+|+||++. |||+|+++++.|++||+.||++|||+||+|+||||||+++..||+.|.+||
T Consensus 105 l~del~~~gIep~vTL~Hfd~P~~L~~~ygGW~nR~~i~~F~~ya~~vf~~f~dkVk~W~TFNE~n~~~~~~y~~~~~~p 184 (460)
T COG2723 105 LFDELKARGIEPFVTLYHFDLPLWLQKPYGGWENRETVDAFARYAATVFERFGDKVKYWFTFNEPNVVVELGYLYGGHPP 184 (460)
T ss_pred HHHHHHHcCCEEEEEecccCCcHHHhhccCCccCHHHHHHHHHHHHHHHHHhcCcceEEEEecchhhhhcccccccccCC
Confidence 9999999999999999999999999886 899999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeecccccCCC--cccHHHHHHHhhccC---
Q 006261 322 GNPDMLEVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSTSTKSKVGVAHHVSFMRPYG--LFDVTAVTLANTLTT--- 396 (653)
Q Consensus 322 G~~~~~~~~~~~~~~~~~~~a~h~LLlAHa~Ay~~ir~~~~~~~g~IGi~~~~~~~~P~~--~~D~~aa~~~n~l~~--- 396 (653)
+..+. ....||+||+++|||+|++++|+..+. .+||++++..+.+|.+ +.|+.++..++.+..
T Consensus 185 ~~~~~----------~~~~qa~hh~~lA~A~avk~~~~~~~~--~kIG~~~~~~p~YP~s~~p~dv~aA~~~~~~~n~~F 252 (460)
T COG2723 185 GIVDP----------KAAYQVAHHMLLAHALAVKAIKKINPK--GKVGIILNLTPAYPLSDKPEDVKAAENADRFHNRFF 252 (460)
T ss_pred CccCH----------HHHHHHHHHHHHHHHHHHHHHHhhCCc--CceEEEeccCcCCCCCCCHHHHHHHHHHHHHhhhhh
Confidence 87653 234599999999999999999999763 2899999999999987 678888876544322
Q ss_pred --------Ccc-------------------ccccC-CCcceeEeeccCC-ceeeCCCC-----------cccCC--CCCc
Q 006261 397 --------FPY-------------------VDSIS-DRLDFIGINYYGQ-EVVSGPGL-----------KLVET--DEYS 434 (653)
Q Consensus 397 --------~p~-------------------~d~I~-~s~DFiGINYYt~-~~V~~~g~-----------~~~~~--~~~s 434 (653)
+|. ++.++ ++.||||+|||++ .+++.... ..+.+ .+.+
T Consensus 253 lD~~~~G~yp~~~~~~~~~~~~~~~~~~~Dl~~lk~~~~DfiG~NYY~~s~v~~~~~~~~~~~~~~~~~~~~~~p~~~~s 332 (460)
T COG2723 253 LDAQVKGEYPEYLEKELEENGILPEIEDGDLEILKENTVDFIGLNYYTPSRVKAAEPRYVSGYGPGGFFTSVPNPGLEVS 332 (460)
T ss_pred cchhhcCcCCHHHHHHHHhcCCCcccCcchHHHHhcCCCCeEEEeeeeeeeEeeccCCcCCcccccccccccCCCCCccc
Confidence 221 01123 4589999999994 44432211 11122 2567
Q ss_pred CCCCccCchHHHHHHHHHHHHhCCCCCCEEEeecCCCC--------CCCcccHHHHHHHHHHHHHHHHcCCCeeEEEEee
Q 006261 435 ESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSD--------ETDLIRRPYVIEHLLAVYAAMITGVPVIGYLFWT 506 (653)
Q Consensus 435 ~~Gw~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~ad--------~~D~~Ri~YL~~hL~~v~~Ai~dGV~V~GY~~WS 506 (653)
++||+|||.||+.+|.++++||+ +||||||||++. .+|+.||+||++||.+|++||++||+|+||++||
T Consensus 333 dwGWeI~P~GL~~~l~~~~~rY~---~p~fItENG~G~~d~~~~~~i~DdyRI~Yl~~Hl~~v~~AI~dGv~v~GY~~Ws 409 (460)
T COG2723 333 DWGWEIYPKGLYDILEKLYERYG---IPLFITENGLGVKDEVDFDGINDDYRIDYLKEHLKAVKKAIEDGVDVRGYFAWS 409 (460)
T ss_pred CCCceeChHHHHHHHHHHHHHhC---CCeEEecCCCCcccccccCCcCchHHHHHHHHHHHHHHHHHHcCCCcccceecc
Confidence 99999999999999999999996 999999999872 2678999999999999999999999999999999
Q ss_pred cccccCCcCCCCCccceEEEcCCCCccccccchHHHHHHHHHcCC
Q 006261 507 ISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTTGK 551 (653)
Q Consensus 507 LlDNfEW~~GY~~RFGL~~VD~~~~l~R~PK~Sa~wY~~ii~~~~ 551 (653)
++||+||.+||++||||++||++|+++|+||+|++||+++|++|+
T Consensus 410 ~iD~~sw~~gy~kRYGli~VD~~~~~~R~~KkS~~WyK~vi~sng 454 (460)
T COG2723 410 LIDNYSWANGYKKRYGLVYVDYDTDLERTPKKSFYWYKEVIESNG 454 (460)
T ss_pred cccccchhhccccccccEEEcccccceeeecCceeeeHHHHhcCC
Confidence 999999999999999999999987689999999999999999988
No 11
>PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional
Probab=100.00 E-value=1.5e-94 Score=797.91 Aligned_cols=370 Identities=26% Similarity=0.472 Sum_probs=315.1
Q ss_pred CCCchhhhcccccccc------------cC--CCccccccCCCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCC
Q 006261 165 VPTENEEVHHKVTAWH------------NV--PHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKE 230 (653)
Q Consensus 165 ~~~~~~~~~~~~~~~~------------n~--~~~~~a~~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G 230 (653)
-||+||.|+|.+++.- ++ ++++.||+|||+|+|||+||++||+++|||||+||||+|++ ..+
T Consensus 29 g~siwD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~D~Yhry~eDi~l~~~lG~~~yR~si~WsRi~P~g----~~~ 104 (474)
T PRK09852 29 GLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEAIDFYHRYKEDIALMAEMGFKVFRTSIAWSRLFPQG----DEL 104 (474)
T ss_pred CCchhhccccCCCcccccccccccccccccCcCCCCccCchhhhhHHHHHHHHHcCCCeEEeeceeeeeeeCC----CCC
Confidence 5788998888776541 22 26789999999999999999999999999999999999985 235
Q ss_pred cCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccc-cCCCCChhhHHHHHHHHHHHHHHhcCccceEEEccCccee
Q 006261 231 TVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGE-YGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVF 309 (653)
Q Consensus 231 ~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~-~GGW~n~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v~ 309 (653)
.+|++|++||+++|++|+++||+|||||||||+|+||++ +|||+|++++++|++||++||++|||+||+|+|||||+++
T Consensus 105 ~~n~~~~~~Y~~~i~~l~~~gi~p~VtL~H~~~P~~l~~~~GGW~~~~~~~~F~~ya~~~~~~fgd~Vk~WiTfNEPn~~ 184 (474)
T PRK09852 105 TPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKMVEFFSRYARTCFEAFDGLVKYWLTFNEINIM 184 (474)
T ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEEEeeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhcCcCCeEEeecchhhh
Confidence 689999999999999999999999999999999999986 5999999999999999999999999999999999999999
Q ss_pred eecccc-CCC-CCCCCCchhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeecccccCCC--cccH
Q 006261 310 CMLTYC-AGT-WPGGNPDMLEVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSTSTKSKVGVAHHVSFMRPYG--LFDV 385 (653)
Q Consensus 310 ~~~GY~-~G~-~PPG~~~~~~~~~~~~~~~~~~~a~h~LLlAHa~Ay~~ir~~~~~~~g~IGi~~~~~~~~P~~--~~D~ 385 (653)
+..||. .|. +||+.... ...++++||+++||++||++||+..+ +++||++++..+++|.+ +.|+
T Consensus 185 ~~~gy~~~g~~~~p~~~~~----------~~~~~~~hn~llAHa~A~~~~~~~~~--~~~IGi~~~~~~~~P~~~~~~d~ 252 (474)
T PRK09852 185 LHSPFSGAGLVFEEGENQD----------QVKYQAAHHELVASALATKIAHEVNP--QNQVGCMLAGGNFYPYSCKPEDV 252 (474)
T ss_pred hccCccccCcccCCCCCch----------HhHHHHHHHHHHHHHHHHHHHHHhCC--CCeEEEEEeCCeeeeCCCCHHHH
Confidence 999996 675 47763211 11358999999999999999998753 68999999999999976 5677
Q ss_pred HHHHHHh---hcc-------CCc--------------c-----ccccCCCcceeEeeccCCceeeCCC------Cc----
Q 006261 386 TAVTLAN---TLT-------TFP--------------Y-----VDSISDRLDFIGINYYGQEVVSGPG------LK---- 426 (653)
Q Consensus 386 ~aa~~~n---~l~-------~~p--------------~-----~d~I~~s~DFiGINYYt~~~V~~~g------~~---- 426 (653)
.|+..++ .+. .+| . .+.|++++||||||||++.+|+... ..
T Consensus 253 ~AA~~~~~~~~~~~d~~~~G~YP~~~~~~~~~~~~~p~~~~~d~~~i~~~~DFlGiNyYt~~~v~~~~~~~~~~~~~~~~ 332 (474)
T PRK09852 253 WAALEKDRENLFFIDVQARGAYPAYSARVFREKGVTIDKAPGDDEILKNTVDFVSFSYYASRCASAEMNANNSSAANVVK 332 (474)
T ss_pred HHHHHHHHHhhhhcchhhCCCccHHHHHHHHhcCCCCCCCHHHHHHhcCCCCEEEEccccCeecccCCCCCCCCcCCcee
Confidence 7774322 110 011 1 1235789999999999999886421 00
Q ss_pred ccCCC--CCcCCCCccCchHHHHHHHHHHHHhCCCCCCEEEeecCCCC---------CCCcccHHHHHHHHHHHHHHHHc
Q 006261 427 LVETD--EYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSD---------ETDLIRRPYVIEHLLAVYAAMIT 495 (653)
Q Consensus 427 ~~~~~--~~s~~Gw~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~ad---------~~D~~Ri~YL~~hL~~v~~Ai~d 495 (653)
...++ +.+++||+|+|+||+.+|+++++||+ .||||||||++. .+|..|+.||++||.+|++||++
T Consensus 333 ~~~~p~~~~~~~gw~i~P~Gl~~~l~~~~~~Y~---~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~Yl~~hl~~~~~Ai~d 409 (474)
T PRK09852 333 SLRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQ---KPLFLVENGLGAKDEIAANGEINDDYRISYLREHIRAMGEAIAD 409 (474)
T ss_pred cccCCCcccCCCCCeeChHHHHHHHHHHHHhcC---CCEEEeCCCCCCCCCcCCCCccCCHHHHHHHHHHHHHHHHHHHC
Confidence 01111 45779999999999999999999996 689999999983 24888999999999999999999
Q ss_pred CCCeeEEEEeecccccCCcCC-CCCccceEEEcCCC----CccccccchHHHHHHHHHcCCCC
Q 006261 496 GVPVIGYLFWTISDNWEWADG-YGPKFGLVAVDRAN----NLARIPRPSYHLFTKVVTTGKVT 553 (653)
Q Consensus 496 GV~V~GY~~WSLlDNfEW~~G-Y~~RFGL~~VD~~~----~l~R~PK~Sa~wY~~ii~~~~i~ 553 (653)
||||+|||+|||||||||..| |++|||||+||+++ +++|+||+|++||+++|++++.+
T Consensus 410 Gv~V~GY~~WSl~Dn~Ew~~G~y~~RfGLv~VD~~~~~~~t~~R~pK~S~~wy~~ii~~ng~~ 472 (474)
T PRK09852 410 GIPLMGYTTWGCIDLVSASTGEMSKRYGFVYVDRDDAGNGTLTRTRKKSFWWYKKVIASNGED 472 (474)
T ss_pred CCCEEEEEeecccccccccCCCccceeeeEEECCCCCCCcccceecccHHHHHHHHHHhCCcc
Confidence 999999999999999999999 99999999999986 57999999999999999988764
No 12
>PRK15014 6-phospho-beta-glucosidase BglA; Provisional
Probab=100.00 E-value=5.7e-94 Score=794.20 Aligned_cols=369 Identities=25% Similarity=0.454 Sum_probs=311.6
Q ss_pred CCCchhhhc---c-cccccc----cC--CCccccccCCCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCCh
Q 006261 165 VPTENEEVH---H-KVTAWH----NV--PHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNF 234 (653)
Q Consensus 165 ~~~~~~~~~---~-~~~~~~----n~--~~~~~a~~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~ 234 (653)
-||+||.|+ | .++++. .+ .+++.||+|||+|+|||+|||+||+++|||||+||||+|+| ..+.+|+
T Consensus 31 g~siwD~~~~~~~~~~~~~~~~~~~~~~~~~~~A~D~Yhry~EDI~Lm~elG~~~yRfSIsWsRI~P~G----~~~~~N~ 106 (477)
T PRK15014 31 GPSICDVLTGGAHGVPREITKEVVPGKYYPNHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKG----DEAQPNE 106 (477)
T ss_pred cccHhhccccccccCccccccccccCCcCCCCcccCcccccHHHHHHHHHcCCCEEEecccceeeccCC----CCCCCCH
Confidence 679999999 4 355541 22 36789999999999999999999999999999999999985 2356999
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccc-cCCCCChhhHHHHHHHHHHHHHHhcCccceEEEccCccee----
Q 006261 235 AALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGE-YGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVF---- 309 (653)
Q Consensus 235 ~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~-~GGW~n~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v~---- 309 (653)
+||+||+++|++|+++||+|||||||||+|+||++ +|||+|++++++|++||++||++|||+|++|+|||||+++
T Consensus 107 ~gl~~Y~~lid~l~~~GI~P~vTL~H~dlP~~L~~~yGGW~n~~~~~~F~~Ya~~~f~~fgdrVk~WiT~NEp~~~~~~~ 186 (477)
T PRK15014 107 EGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNEINNQRNWR 186 (477)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEeeCCCCCHHHHHhcCCCCChHHHHHHHHHHHHHHHHhcCcCCEEEEecCcccccccc
Confidence 99999999999999999999999999999999986 5999999999999999999999999999999999999987
Q ss_pred -eeccccC-CCC-CCCCCchhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeecccccCCC--ccc
Q 006261 310 -CMLTYCA-GTW-PGGNPDMLEVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSTSTKSKVGVAHHVSFMRPYG--LFD 384 (653)
Q Consensus 310 -~~~GY~~-G~~-PPG~~~~~~~~~~~~~~~~~~~a~h~LLlAHa~Ay~~ir~~~~~~~g~IGi~~~~~~~~P~~--~~D 384 (653)
++.||.. |.+ ||+.... ...++|+||+++||++||++||+.. ++++||++++..+++|.+ +.|
T Consensus 187 ~~~~gy~~~g~~~~~~~~~~----------~~~~~~~h~~llAHa~A~~~~~~~~--~~~~IGi~~~~~~~~P~~~~~~D 254 (477)
T PRK15014 187 APLFGYCCSGVVYTEHENPE----------ETMYQVLHHQFVASALAVKAARRIN--PEMKVGCMLAMVPLYPYSCNPDD 254 (477)
T ss_pred cccccccccccccCCCCchh----------HHHHHHHHHHHHHHHHHHHHHHHhC--CCCeEEEEEeCceeccCCCCHHH
Confidence 6778874 765 4432110 1235899999999999999999875 368999999999999975 568
Q ss_pred HHHHHHHhh--c-cC-------Cc--------------cc-----ccc-CCCcceeEeeccCCceeeCCCC---------
Q 006261 385 VTAVTLANT--L-TT-------FP--------------YV-----DSI-SDRLDFIGINYYGQEVVSGPGL--------- 425 (653)
Q Consensus 385 ~~aa~~~n~--l-~~-------~p--------------~~-----d~I-~~s~DFiGINYYt~~~V~~~g~--------- 425 (653)
+.|+.++.. . .. +| .+ +.+ ++++||||||||++.+|+..+.
T Consensus 255 ~~Aa~~~~~~~~~f~d~~~~G~YP~~~~~~~~~~~~~~~~~~~d~~~i~~~~~DFlGiNyYt~~~v~~~~~~~~~~~~~~ 334 (477)
T PRK15014 255 VMFAQESMRERYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMTNAVKAEGGTGDAISGFE 334 (477)
T ss_pred HHHHHHHHHhcccccccccCCCCCHHHHHHHHhcCCCCCCCHHHHHHHhcCCCCEEEEcceeCeeeccCCCCCCCccccc
Confidence 887754321 1 10 11 00 113 5789999999999998874211
Q ss_pred cccCCC--CCcCCCCccCchHHHHHHHHHHHHhCCCCCCEEEeecCCCC---------CCCcccHHHHHHHHHHHHHHHH
Q 006261 426 KLVETD--EYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSD---------ETDLIRRPYVIEHLLAVYAAMI 494 (653)
Q Consensus 426 ~~~~~~--~~s~~Gw~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~ad---------~~D~~Ri~YL~~hL~~v~~Ai~ 494 (653)
...+++ ..+++||+|+|+||+.+|+++++||+ +||||||||++. .+|..|+.||++||.+|++||+
T Consensus 335 ~~~~~~~~~~~~~gw~i~P~Gl~~~l~~~~~~Y~---~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~Yl~~hl~~l~~Ai~ 411 (477)
T PRK15014 335 GSVPNPYVKASDWGWQIDPVGLRYALCELYERYQ---KPLFIVENGFGAYDKVEEDGSINDDYRIDYLRAHIEEMKKAVT 411 (477)
T ss_pred cccCCCCcccCCCCCccCcHHHHHHHHHHHHhcC---CCEEEeCCCCCCCCCcCcCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 011122 35679999999999999999999996 689999999983 2488999999999999999995
Q ss_pred -cCCCeeEEEEeecccccCCcCC-CCCccceEEEcCCC----CccccccchHHHHHHHHHcCCC
Q 006261 495 -TGVPVIGYLFWTISDNWEWADG-YGPKFGLVAVDRAN----NLARIPRPSYHLFTKVVTTGKV 552 (653)
Q Consensus 495 -dGV~V~GY~~WSLlDNfEW~~G-Y~~RFGL~~VD~~~----~l~R~PK~Sa~wY~~ii~~~~i 552 (653)
+||||+||++|||||||||.+| |++|||||+||+++ +++|+||+|++||+++|++|+.
T Consensus 412 ~dGv~v~GY~~WSl~DnfEw~~G~y~~RfGl~~VD~~~~~~~~~~R~pK~S~~wy~~ii~~ng~ 475 (477)
T PRK15014 412 YDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWYKEVIASNGE 475 (477)
T ss_pred HcCCCEEEEeeccchhhhcccCCCccCccceEEECCCCCCCcccceecccHHHHHHHHHHhcCC
Confidence 9999999999999999999999 99999999999986 4799999999999999998765
No 13
>TIGR03356 BGL beta-galactosidase.
Probab=100.00 E-value=1.1e-90 Score=759.85 Aligned_cols=360 Identities=31% Similarity=0.566 Sum_probs=315.6
Q ss_pred CCCCchhhhcccccccccCCCccccccCCCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHH
Q 006261 164 EVPTENEEVHHKVTAWHNVPHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWI 243 (653)
Q Consensus 164 ~~~~~~~~~~~~~~~~~n~~~~~~a~~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~L 243 (653)
.-||+||.++|+++.+.++.+++.||+|||+|+|||+|||++|+++|||||+||||+|+| .|.+|+++++||+++
T Consensus 25 kg~s~wd~~~~~~~~~~~~~~~~~a~d~y~~y~eDi~l~~~~G~~~~R~si~Wsri~p~g-----~~~~n~~~~~~y~~~ 99 (427)
T TIGR03356 25 RGPSIWDTFSHTPGKVKDGDTGDVACDHYHRYEEDVALMKELGVDAYRFSIAWPRIFPEG-----TGPVNPKGLDFYDRL 99 (427)
T ss_pred CccchhheeccCCCcccCCCCCCccccHHHhHHHHHHHHHHcCCCeEEcccchhhcccCC-----CCCcCHHHHHHHHHH
Confidence 368999999999988777778899999999999999999999999999999999999985 368999999999999
Q ss_pred HHHHHHcCCeEEEEeccCCCCccccccCCCCChhhHHHHHHHHHHHHHHhcCccceEEEccCcceeeeccccCCCCCCCC
Q 006261 244 INRVRSYGMKVMLTLFHHSLPAWAGEYGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCMLTYCAGTWPGGN 323 (653)
Q Consensus 244 Id~L~~~GIePiVTL~HwDLP~wL~~~GGW~n~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v~~~~GY~~G~~PPG~ 323 (653)
|++|+++||+|||||||||+|+||++.|||+|++++++|++||+.||++|||+|++|+|||||++++..||..|.+||+.
T Consensus 100 i~~l~~~gi~pivtL~Hfd~P~~l~~~gGw~~~~~~~~f~~ya~~~~~~~~d~v~~w~t~NEp~~~~~~~y~~G~~~P~~ 179 (427)
T TIGR03356 100 VDELLEAGIEPFVTLYHWDLPQALEDRGGWLNRDTAEWFAEYAAVVAERLGDRVKHWITLNEPWCSAFLGYGLGVHAPGL 179 (427)
T ss_pred HHHHHHcCCeeEEeeccCCccHHHHhcCCCCChHHHHHHHHHHHHHHHHhCCcCCEEEEecCcceecccchhhccCCCCC
Confidence 99999999999999999999999988899999999999999999999999999999999999999999999999999985
Q ss_pred CchhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeecccccCCC--cccHHHHHHHhhcc------
Q 006261 324 PDMLEVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSTSTKSKVGVAHHVSFMRPYG--LFDVTAVTLANTLT------ 395 (653)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~a~h~LLlAHa~Ay~~ir~~~~~~~g~IGi~~~~~~~~P~~--~~D~~aa~~~n~l~------ 395 (653)
++. ....+++|||++||++||++||+..+ +++||++++..+++|.+ +.|+.++.+.+.+.
T Consensus 180 ~~~----------~~~~~~~hnll~Aha~A~~~~~~~~~--~~~IGi~~~~~~~~P~~~~~~d~~aa~~~~~~~~~~f~d 247 (427)
T TIGR03356 180 RDL----------RAALQAAHHLLLAHGLAVQALRANGP--GAQVGIVLNLTPVYPASDSPEDVAAARRADGLLNRWFLD 247 (427)
T ss_pred ccH----------HHHHHHHHHHHHHHHHHHHHHHHhCC--CCeEEEEEeCCeeeeCCCCHHHHHHHHHHHHHHhhhhhH
Confidence 432 11248999999999999999998754 68999999999999975 56777775443211
Q ss_pred -----CCc-----------c-----ccccCCCcceeEeeccCCceeeCCCCc------ccCCCCCcCCCCccCchHHHHH
Q 006261 396 -----TFP-----------Y-----VDSISDRLDFIGINYYGQEVVSGPGLK------LVETDEYSESGRGVYPDGLFRV 448 (653)
Q Consensus 396 -----~~p-----------~-----~d~I~~s~DFiGINYYt~~~V~~~g~~------~~~~~~~s~~Gw~i~P~GL~~l 448 (653)
.+| . .+.+++++||||||||++.+|+..... ..++.+.+.+||+++|+||+.+
T Consensus 248 ~~~~G~yP~~~~~~l~~~p~~~~~d~~~l~~~~DFiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~gw~i~P~Gl~~~ 327 (427)
T TIGR03356 248 PLLKGRYPEDLLEYLGDAPFVQDGDLETIAQPLDFLGINYYTRSVVAADPGTGAGFVEVPEGVPKTAMGWEVYPEGLYDL 327 (427)
T ss_pred HHhCCCCCHHHHHHhccCCCCCHHHHHHhcCCCCEEEEeccccceeccCCCCCCCccccCCCCCcCCCCCeechHHHHHH
Confidence 122 0 123578999999999999988742110 0112244668999999999999
Q ss_pred HHHHHHHhCCCCCCEEEeecCCCC--------CCCcccHHHHHHHHHHHHHHHHcCCCeeEEEEeecccccCCcCCCCCc
Q 006261 449 LHQFHERYKHLNLPFIITENGVSD--------ETDLIRRPYVIEHLLAVYAAMITGVPVIGYLFWTISDNWEWADGYGPK 520 (653)
Q Consensus 449 L~~i~~rY~~~~~PI~ITENG~ad--------~~D~~Ri~YL~~hL~~v~~Ai~dGV~V~GY~~WSLlDNfEW~~GY~~R 520 (653)
|+++++||+ ++||+|||||++. .+|+.|+.||++||.+|++||++||||+||++|||+|||||.+||++|
T Consensus 328 L~~~~~rY~--~ppi~ITENG~~~~d~~~~g~~~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~Dn~ew~~gy~~r 405 (427)
T TIGR03356 328 LLRLKEDYP--GPPIYITENGAAFDDEVTDGEVHDPERIAYLRDHLAALARAIEEGVDVRGYFVWSLLDNFEWAEGYSKR 405 (427)
T ss_pred HHHHHHhcC--CCCEEEeCCCCCcCCCCcCCCcCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEecccccccchhcccccc
Confidence 999999997 4689999999984 248899999999999999999999999999999999999999999999
Q ss_pred cceEEEcCCCCccccccchHHHH
Q 006261 521 FGLVAVDRANNLARIPRPSYHLF 543 (653)
Q Consensus 521 FGL~~VD~~~~l~R~PK~Sa~wY 543 (653)
|||++||+++ ++|+||+|++||
T Consensus 406 fGl~~VD~~~-~~R~~K~S~~wy 427 (427)
T TIGR03356 406 FGLVHVDYET-QKRTPKDSAKWY 427 (427)
T ss_pred cceEEECCCC-CcccccceeeeC
Confidence 9999999974 799999999997
No 14
>smart00633 Glyco_10 Glycosyl hydrolase family 10.
Probab=99.61 E-value=7.5e-14 Score=143.72 Aligned_cols=249 Identities=19% Similarity=0.268 Sum_probs=159.9
Q ss_pred cccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCe--EEEEeccCCCCccccccCCCCChhhHHHHHHHHHHHHH
Q 006261 214 IDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMK--VMLTLFHHSLPAWAGEYGGWKLEKTIDYFMDFTRLVVD 291 (653)
Q Consensus 214 IsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIe--PiVTL~HwDLP~wL~~~GGW~n~e~vd~Fa~YA~~vf~ 291 (653)
+.|++|+|.+ |.+|++.++ .+++.++++||+ ..+.+.|...|.|+...+ .++..+.|.+|.+.+++
T Consensus 1 ~kW~~~ep~~------G~~n~~~~D---~~~~~a~~~gi~v~gH~l~W~~~~P~W~~~~~---~~~~~~~~~~~i~~v~~ 68 (254)
T smart00633 1 MKWDSTEPSR------GQFNFSGAD---AIVNFAKENGIKVRGHTLVWHSQTPDWVFNLS---KETLLARLENHIKTVVG 68 (254)
T ss_pred CCcccccCCC------CccChHHHH---HHHHHHHHCCCEEEEEEEeecccCCHhhhcCC---HHHHHHHHHHHHHHHHH
Confidence 3699999974 789987765 699999999999 456677889999987533 57788999999999999
Q ss_pred HhcCccceEEEccCcceeeeccccCCCCCCCCCchhhhhhcCCCchhHHHHH-HHHHHHHHHHHHHHHhcCCCCCCeEEE
Q 006261 292 SVSDIVDYWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATSALPTGVFNQAM-HWMAIAHSKAYDYIHAKSTSTKSKVGV 370 (653)
Q Consensus 292 ~fGDrVk~WiT~NEP~v~~~~GY~~G~~PPG~~~~~~~~~~~~~~~~~~~a~-h~LLlAHa~Ay~~ir~~~~~~~g~IGi 370 (653)
+|+++|..|-++|||......|+... .+..++ ..++ ..|+++.|+..| +.++-+
T Consensus 69 ry~g~i~~wdV~NE~~~~~~~~~~~~--------------------~w~~~~G~~~i---~~af~~ar~~~P--~a~l~~ 123 (254)
T smart00633 69 RYKGKIYAWDVVNEALHDNGSGLRRS--------------------VWYQILGEDYI---EKAFRYAREADP--DAKLFY 123 (254)
T ss_pred HhCCcceEEEEeeecccCCCcccccc--------------------hHHHhcChHHH---HHHHHHHHHhCC--CCEEEE
Confidence 99999999999999985321001000 111111 1122 457777788776 445422
Q ss_pred EeecccccCCCcccHHHHHHHhhccCCccccccCCCcceeEeeccCCceeeCCCCcccCCCCCcCCCCccCchHHHHHHH
Q 006261 371 AHHVSFMRPYGLFDVTAVTLANTLTTFPYVDSISDRLDFIGINYYGQEVVSGPGLKLVETDEYSESGRGVYPDGLFRVLH 450 (653)
Q Consensus 371 ~~~~~~~~P~~~~D~~aa~~~n~l~~~p~~d~I~~s~DFiGINYYt~~~V~~~g~~~~~~~~~s~~Gw~i~P~GL~~lL~ 450 (653)
+......+. ... ....+.+ ..+..-...+|-||++..... . ...|..|...|.
T Consensus 124 -Ndy~~~~~~---~k~-~~~~~~v---~~l~~~g~~iDgiGlQ~H~~~--~-----------------~~~~~~~~~~l~ 176 (254)
T smart00633 124 -NDYNTEEPN---AKR-QAIYELV---KKLKAKGVPIDGIGLQSHLSL--G-----------------SPNIAEIRAALD 176 (254)
T ss_pred -eccCCcCcc---HHH-HHHHHHH---HHHHHCCCccceeeeeeeecC--C-----------------CCCHHHHHHHHH
Confidence 211111110 010 0000000 011112345899999643110 0 012456888887
Q ss_pred HHHHHhCCCCCCEEEeecCCCCCCC-cccHHHHHHHHHHHHHHHHcCCCeeEEEEeecccccCCcCCCCCccceEEEcCC
Q 006261 451 QFHERYKHLNLPFIITENGVSDETD-LIRRPYVIEHLLAVYAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRA 529 (653)
Q Consensus 451 ~i~~rY~~~~~PI~ITENG~ad~~D-~~Ri~YL~~hL~~v~~Ai~dGV~V~GY~~WSLlDNfEW~~GY~~RFGL~~VD~~ 529 (653)
.+.+. ++||+|||.++....+ ..+.+++++++..+.. .. .|.|.++|.+.|...|..+ .+.||+.=|
T Consensus 177 ~~~~~----g~pi~iTE~dv~~~~~~~~qA~~~~~~l~~~~~---~p-~v~gi~~Wg~~d~~~W~~~--~~~~L~d~~-- 244 (254)
T smart00633 177 RFASL----GLEIQITELDISGYPNPQAQAADYEEVFKACLA---HP-AVTGVTVWGVTDKYSWLDG--GAPLLFDAN-- 244 (254)
T ss_pred HHHHc----CCceEEEEeecCCCCcHHHHHHHHHHHHHHHHc---CC-CeeEEEEeCCccCCcccCC--CCceeECCC--
Confidence 77543 5999999999986543 3456677777765432 23 6899999999999999875 567887323
Q ss_pred CCccccccchHHH
Q 006261 530 NNLARIPRPSYHL 542 (653)
Q Consensus 530 ~~l~R~PK~Sa~w 542 (653)
-+|||++++
T Consensus 245 ----~~~kpa~~~ 253 (254)
T smart00633 245 ----YQPKPAYWA 253 (254)
T ss_pred ----CCCChhhhc
Confidence 378888764
No 15
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A ....
Probab=99.51 E-value=8e-13 Score=134.67 Aligned_cols=254 Identities=20% Similarity=0.269 Sum_probs=156.3
Q ss_pred ChHHHHHHHHhcCCCeEEecccccccc-CCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccccCC
Q 006261 194 DPDIELKLAKDTGVSVFRLGIDWSRIM-PAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGG 272 (653)
Q Consensus 194 ~~~eDI~LmkelGv~~yRfSIsWsRI~-P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~~GG 272 (653)
..++|++.|+++|+|+.|+.|.|..++ |.+ .+.++...+++++++|+.|.++||.+||+||+. |.|....++
T Consensus 22 ~~~~~~~~~~~~G~n~VRi~v~~~~~~~~~~-----~~~~~~~~~~~ld~~v~~a~~~gi~vild~h~~--~~w~~~~~~ 94 (281)
T PF00150_consen 22 ITEADFDQLKALGFNTVRIPVGWEAYQEPNP-----GYNYDETYLARLDRIVDAAQAYGIYVILDLHNA--PGWANGGDG 94 (281)
T ss_dssp SHHHHHHHHHHTTESEEEEEEESTSTSTTST-----TTSBTHHHHHHHHHHHHHHHHTT-EEEEEEEES--TTCSSSTST
T ss_pred CHHHHHHHHHHCCCCEEEeCCCHHHhcCCCC-----CccccHHHHHHHHHHHHHHHhCCCeEEEEeccC--ccccccccc
Confidence 669999999999999999999998888 443 256999999999999999999999999999985 777544444
Q ss_pred CC-ChhhHHHHHHHHHHHHHHhcC--ccceEEEccCcceeeeccccCCCCCCCCCchhhhhhcCCCchhHHHHHHHHHHH
Q 006261 273 WK-LEKTIDYFMDFTRLVVDSVSD--IVDYWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATSALPTGVFNQAMHWMAIA 349 (653)
Q Consensus 273 W~-n~e~vd~Fa~YA~~vf~~fGD--rVk~WiT~NEP~v~~~~GY~~G~~PPG~~~~~~~~~~~~~~~~~~~a~h~LLlA 349 (653)
+. .....++|.+|.+.++++|++ .|-.|-.+|||...... ..|+.. -...+...
T Consensus 95 ~~~~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~----~~w~~~-------------------~~~~~~~~ 151 (281)
T PF00150_consen 95 YGNNDTAQAWFKSFWRALAKRYKDNPPVVGWELWNEPNGGNDD----ANWNAQ-------------------NPADWQDW 151 (281)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHTTTTTTEEEESSSSGCSTTST----TTTSHH-------------------HTHHHHHH
T ss_pred cccchhhHHHHHhhhhhhccccCCCCcEEEEEecCCccccCCc----cccccc-------------------cchhhhhH
Confidence 44 355688899999999999944 58899999999864321 011000 00112334
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEeecccccCCCcccHHHHHHHhhccCCccccccCCCcceeEeeccCCceeeCCCCcccC
Q 006261 350 HSKAYDYIHAKSTSTKSKVGVAHHVSFMRPYGLFDVTAVTLANTLTTFPYVDSISDRLDFIGINYYGQEVVSGPGLKLVE 429 (653)
Q Consensus 350 Ha~Ay~~ir~~~~~~~g~IGi~~~~~~~~P~~~~D~~aa~~~n~l~~~p~~d~I~~s~DFiGINYYt~~~V~~~g~~~~~ 429 (653)
..++++.||+..+. ..|-+- ...+. .+....... .| ......|++.+|+|..........
T Consensus 152 ~~~~~~~Ir~~~~~--~~i~~~-~~~~~-----~~~~~~~~~-----~P---~~~~~~~~~~~H~Y~~~~~~~~~~---- 211 (281)
T PF00150_consen 152 YQRAIDAIRAADPN--HLIIVG-GGGWG-----ADPDGAAAD-----NP---NDADNNDVYSFHFYDPYDFSDQWN---- 211 (281)
T ss_dssp HHHHHHHHHHTTSS--SEEEEE-EHHHH-----TBHHHHHHH-----ST---TTTTTSEEEEEEEETTTCHHTTTS----
T ss_pred HHHHHHHHHhcCCc--ceeecC-CCccc-----cccchhhhc-----Cc---ccccCceeEEeeEeCCCCcCCccc----
Confidence 46788889988763 333221 11111 011111111 22 124577999999998532211100
Q ss_pred CCCCcCCCCccCchHHHHHHHHHHHHhCCCCCCEEEeecCCCCCCCcccHHHHHHHHHHHHHHHHcCCCeeEEEEeeccc
Q 006261 430 TDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDETDLIRRPYVIEHLLAVYAAMITGVPVIGYLFWTISD 509 (653)
Q Consensus 430 ~~~~s~~Gw~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~ad~~D~~Ri~YL~~hL~~v~~Ai~dGV~V~GY~~WSLlD 509 (653)
. +-......+...+..........++||+|+|.|++..+......+....+..+ .+.| .|.++|++-.
T Consensus 212 -----~-~~~~~~~~~~~~~~~~~~~~~~~g~pv~~gE~G~~~~~~~~~~~~~~~~~~~~---~~~~---~g~~~W~~~~ 279 (281)
T PF00150_consen 212 -----P-GNWGDASALESSFRAALNWAKKNGKPVVVGEFGWSNNDGNGSTDYADAWLDYL---EQNG---IGWIYWSWKP 279 (281)
T ss_dssp -----T-CSHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSTTTSCHHHHHHHHHHHHH---HHTT---CEEEECEESS
T ss_pred -----c-ccchhhhHHHHHHHHHHHHHHHcCCeEEEeCcCCcCCCCCcCHHHHHHHHHHH---HHCC---CeEEEEecCC
Confidence 0 00011112223333332222222689999999998544333444444443322 2334 5999998744
No 16
>PRK10150 beta-D-glucuronidase; Provisional
Probab=99.07 E-value=4.4e-08 Score=112.78 Aligned_cols=252 Identities=20% Similarity=0.210 Sum_probs=147.4
Q ss_pred ChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCcccc-----
Q 006261 194 DPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAG----- 268 (653)
Q Consensus 194 ~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~----- 268 (653)
.+..|+++||++|+|++|+| ..|.. ..+++.|=+.||-.+.-+--|....|..
T Consensus 314 ~~~~d~~l~K~~G~N~vR~s-----h~p~~-----------------~~~~~~cD~~GllV~~E~p~~~~~~~~~~~~~~ 371 (604)
T PRK10150 314 LNVHDHNLMKWIGANSFRTS-----HYPYS-----------------EEMLDLADRHGIVVIDETPAVGLNLSFGAGLEA 371 (604)
T ss_pred HHHHHHHHHHHCCCCEEEec-----cCCCC-----------------HHHHHHHHhcCcEEEEecccccccccccccccc
Confidence 46889999999999999995 23431 2477888899998886553222222211
Q ss_pred ---ccCCCC----ChhhHHHHHHHHHHHHHHhcCc--cceEEEccCcceeeeccccCCCCCCCCCchhhhhhcCCCchhH
Q 006261 269 ---EYGGWK----LEKTIDYFMDFTRLVVDSVSDI--VDYWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATSALPTGVF 339 (653)
Q Consensus 269 ---~~GGW~----n~e~vd~Fa~YA~~vf~~fGDr--Vk~WiT~NEP~v~~~~GY~~G~~PPG~~~~~~~~~~~~~~~~~ 339 (653)
....|. +++..+.+.+-++.+++++... |-.|...||+..- . ++ .
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~mv~r~~NHPSIi~Ws~gNE~~~~---------~-~~---------------~- 425 (604)
T PRK10150 372 GNKPKETYSEEAVNGETQQAHLQAIRELIARDKNHPSVVMWSIANEPASR---------E-QG---------------A- 425 (604)
T ss_pred cccccccccccccchhHHHHHHHHHHHHHHhccCCceEEEEeeccCCCcc---------c-hh---------------H-
Confidence 112232 3567788888899999998777 6688888886310 0 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeecccccCCCcccHHHHHHHhhccCCccccccCCCcceeEeeccCCce
Q 006261 340 NQAMHWMAIAHSKAYDYIHAKSTSTKSKVGVAHHVSFMRPYGLFDVTAVTLANTLTTFPYVDSISDRLDFIGINYYGQEV 419 (653)
Q Consensus 340 ~~a~h~LLlAHa~Ay~~ir~~~~~~~g~IGi~~~~~~~~P~~~~D~~aa~~~n~l~~~p~~d~I~~s~DFiGINYYt~~~ 419 (653)
... +...++++|+..++ -.|..+.+... .+ ..+.....+|++|+|.|...+
T Consensus 426 ----~~~---~~~l~~~~k~~Dpt--R~vt~~~~~~~-~~-------------------~~~~~~~~~Dv~~~N~Y~~wy 476 (604)
T PRK10150 426 ----REY---FAPLAELTRKLDPT--RPVTCVNVMFA-TP-------------------DTDTVSDLVDVLCLNRYYGWY 476 (604)
T ss_pred ----HHH---HHHHHHHHHhhCCC--CceEEEecccC-Cc-------------------ccccccCcccEEEEcccceec
Confidence 011 13455667777663 22333221100 00 001123458999999886422
Q ss_pred eeCCCCcccCCCCCcCCCCccCchHHHHHHHHHHHHhCCCCCCEEEeecCCCCC-----------CCcccHHHHHHHHHH
Q 006261 420 VSGPGLKLVETDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDE-----------TDLIRRPYVIEHLLA 488 (653)
Q Consensus 420 V~~~g~~~~~~~~~s~~Gw~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~ad~-----------~D~~Ri~YL~~hL~~ 488 (653)
...... . .. -..+...+..+++.| ++||+|||.|.+.. +++....|+.+|+
T Consensus 477 ~~~~~~--------~----~~-~~~~~~~~~~~~~~~---~kP~~isEyg~~~~~~~h~~~~~~~~ee~q~~~~~~~~-- 538 (604)
T PRK10150 477 VDSGDL--------E----TA-EKVLEKELLAWQEKL---HKPIIITEYGADTLAGLHSMYDDMWSEEYQCAFLDMYH-- 538 (604)
T ss_pred CCCCCH--------H----HH-HHHHHHHHHHHHHhc---CCCEEEEccCCccccccccCCCCCCCHHHHHHHHHHHH--
Confidence 110000 0 00 011334455555556 49999999996431 1223444555555
Q ss_pred HHHHHHcCCCeeEEEEeecccccCCcCCC----CCccceEEEcCCCCccccccchHHHHHHHHHc
Q 006261 489 VYAAMITGVPVIGYLFWTISDNWEWADGY----GPKFGLVAVDRANNLARIPRPSYHLFTKVVTT 549 (653)
Q Consensus 489 v~~Ai~dGV~V~GY~~WSLlDNfEW~~GY----~~RFGL~~VD~~~~l~R~PK~Sa~wY~~ii~~ 549 (653)
+++++-=.+.|-|+|.+.|-. +..|. ....||+ |. .|+||+++++|+++-+.
T Consensus 539 --~~~~~~p~~~G~~iW~~~D~~-~~~g~~~~~g~~~Gl~--~~----dr~~k~~~~~~k~~~~~ 594 (604)
T PRK10150 539 --RVFDRVPAVVGEQVWNFADFA-TSQGILRVGGNKKGIF--TR----DRQPKSAAFLLKKRWTG 594 (604)
T ss_pred --HHHhcCCceEEEEEEeeeccC-CCCCCcccCCCcceeE--cC----CCCChHHHHHHHHHhhc
Confidence 445544569999999999931 22121 1467986 33 47999999999998753
No 17
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A ....
Probab=98.99 E-value=3.7e-08 Score=105.77 Aligned_cols=240 Identities=20% Similarity=0.312 Sum_probs=136.4
Q ss_pred HHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCC---CCccccccCC
Q 006261 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHS---LPAWAGEYGG 272 (653)
Q Consensus 196 ~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwD---LP~wL~~~GG 272 (653)
++=+++||+.|+|+.|+-| | +.|.. .|.-| +++--.+..+.+++||+.+|++|-=| =|---.....
T Consensus 27 ~d~~~ilk~~G~N~vRlRv-w--v~P~~-----~g~~~---~~~~~~~akrak~~Gm~vlldfHYSD~WaDPg~Q~~P~a 95 (332)
T PF07745_consen 27 KDLFQILKDHGVNAVRLRV-W--VNPYD-----GGYND---LEDVIALAKRAKAAGMKVLLDFHYSDFWADPGKQNKPAA 95 (332)
T ss_dssp --HHHHHHHTT--EEEEEE----SS-TT-----TTTTS---HHHHHHHHHHHHHTT-EEEEEE-SSSS--BTTB-B--TT
T ss_pred CCHHHHHHhcCCCeEEEEe-c--cCCcc-----cccCC---HHHHHHHHHHHHHCCCeEEEeecccCCCCCCCCCCCCcc
Confidence 4568999999999999977 5 34432 13333 56777899999999999999998534 2333333468
Q ss_pred CCC---hhhHHHHHHHHHHHHHHh---cCccceEEEccCcceeeeccccCCCCCCCCCchhhhhhcCCCchhHHHHHHHH
Q 006261 273 WKL---EKTIDYFMDFTRLVVDSV---SDIVDYWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATSALPTGVFNQAMHWM 346 (653)
Q Consensus 273 W~n---~e~vd~Fa~YA~~vf~~f---GDrVk~WiT~NEP~v~~~~GY~~G~~PPG~~~~~~~~~~~~~~~~~~~a~h~L 346 (653)
|.+ .+..+.-.+|..-+.+.+ |-.++.+.+=||.+.-.+ ||-|.... +.+ +-.|
T Consensus 96 W~~~~~~~l~~~v~~yT~~vl~~l~~~G~~pd~VQVGNEin~Gml-------wp~g~~~~------------~~~-~a~l 155 (332)
T PF07745_consen 96 WANLSFDQLAKAVYDYTKDVLQALKAAGVTPDMVQVGNEINNGML-------WPDGKPSN------------WDN-LAKL 155 (332)
T ss_dssp CTSSSHHHHHHHHHHHHHHHHHHHHHTT--ESEEEESSSGGGEST-------BTTTCTT-------------HHH-HHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCccEEEeCcccccccc-------CcCCCccC------------HHH-HHHH
Confidence 988 777888889999887666 556888889999885332 45444211 111 2335
Q ss_pred HHHHHHHHHHHHhcCCCCCCeEEEEeecccccCCCcccHHHHH-HHhhccCCccccccCCCcceeEeeccCCceeeCCCC
Q 006261 347 AIAHSKAYDYIHAKSTSTKSKVGVAHHVSFMRPYGLFDVTAVT-LANTLTTFPYVDSISDRLDFIGINYYGQEVVSGPGL 425 (653)
Q Consensus 347 LlAHa~Ay~~ir~~~~~~~g~IGi~~~~~~~~P~~~~D~~aa~-~~n~l~~~p~~d~I~~s~DFiGINYYt~~~V~~~g~ 425 (653)
+ ..+++++|+..+ ..+|-+ |... | .+..... ..+. +......+|+||++||..
T Consensus 156 l---~ag~~AVr~~~p--~~kV~l--H~~~--~---~~~~~~~~~f~~------l~~~g~d~DviGlSyYP~-------- 209 (332)
T PF07745_consen 156 L---NAGIKAVREVDP--NIKVML--HLAN--G---GDNDLYRWFFDN------LKAAGVDFDVIGLSYYPF-------- 209 (332)
T ss_dssp H---HHHHHHHHTHSS--TSEEEE--EES---T---TSHHHHHHHHHH------HHHTTGG-SEEEEEE-ST--------
T ss_pred H---HHHHHHHHhcCC--CCcEEE--EECC--C---CchHHHHHHHHH------HHhcCCCcceEEEecCCC--------
Confidence 5 445566676655 456643 3321 1 1221111 0111 111235789999999962
Q ss_pred cccCCCCCcCCCCccCchHHHHHHHHHHHHhCCCCCCEEEeecCCCCC---CCc-c--------------cHHHHHHHHH
Q 006261 426 KLVETDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDE---TDL-I--------------RRPYVIEHLL 487 (653)
Q Consensus 426 ~~~~~~~~s~~Gw~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~ad~---~D~-~--------------Ri~YL~~hL~ 487 (653)
|.-....|...|..+.+||+ +||+|+|+|++.. .|. . -.+=-+..|.
T Consensus 210 ------------w~~~l~~l~~~l~~l~~ry~---K~V~V~Et~yp~t~~d~D~~~n~~~~~~~~~~yp~t~~GQ~~~l~ 274 (332)
T PF07745_consen 210 ------------WHGTLEDLKNNLNDLASRYG---KPVMVVETGYPWTLDDGDGTGNIIGATSLISGYPATPQGQADFLR 274 (332)
T ss_dssp ------------TST-HHHHHHHHHHHHHHHT----EEEEEEE---SBS--SSSS--SSSSSTGGTTS-SSHHHHHHHHH
T ss_pred ------------CcchHHHHHHHHHHHHHHhC---CeeEEEeccccccccccccccccCccccccCCCCCCHHHHHHHHH
Confidence 22245679999999999995 8999999998832 010 0 0111233344
Q ss_pred HHHHHHHc--CCCeeEEEEeec
Q 006261 488 AVYAAMIT--GVPVIGYLFWTI 507 (653)
Q Consensus 488 ~v~~Ai~d--GV~V~GY~~WSL 507 (653)
.+.+++.+ +-...|.|+|--
T Consensus 275 ~l~~~v~~~p~~~g~GvfYWeP 296 (332)
T PF07745_consen 275 DLINAVKNVPNGGGLGVFYWEP 296 (332)
T ss_dssp HHHHHHHTS--TTEEEEEEE-T
T ss_pred HHHHHHHHhccCCeEEEEeecc
Confidence 45555543 568999999943
No 18
>PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B ....
Probab=98.89 E-value=1.5e-08 Score=108.37 Aligned_cols=267 Identities=21% Similarity=0.338 Sum_probs=156.3
Q ss_pred CCCeEEe--ccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEE--EEeccCCCCccccccCCCCChh---h
Q 006261 206 GVSVFRL--GIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVM--LTLFHHSLPAWAGEYGGWKLEK---T 278 (653)
Q Consensus 206 Gv~~yRf--SIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePi--VTL~HwDLP~wL~~~GGW~n~e---~ 278 (653)
-+|..=. ..-|..++|.+ |.+|.+. .+.+++.++++||++- .-+.|--+|.|+....-+...+ .
T Consensus 34 ~Fn~~t~eN~~Kw~~~e~~~------g~~~~~~---~D~~~~~a~~~g~~vrGH~LvW~~~~P~w~~~~~~~~~~~~~~~ 104 (320)
T PF00331_consen 34 HFNSVTPENEMKWGSIEPEP------GRFNFES---ADAILDWARENGIKVRGHTLVWHSQTPDWVFNLANGSPDEKEEL 104 (320)
T ss_dssp H-SEEEESSTTSHHHHESBT------TBEE-HH---HHHHHHHHHHTT-EEEEEEEEESSSS-HHHHTSTTSSBHHHHHH
T ss_pred hCCeeeeccccchhhhcCCC------CccCccc---hhHHHHHHHhcCcceeeeeEEEcccccceeeeccCCCcccHHHH
Confidence 3444444 58999999974 7899866 4689999999999987 4455778999997542233333 7
Q ss_pred HHHHHHHHHHHHHHhcC--ccceEEEccCcceeeeccccCCCCCCCCCchhhhhhcCCCchhHHHHH-HHHHHHHHHHHH
Q 006261 279 IDYFMDFTRLVVDSVSD--IVDYWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATSALPTGVFNQAM-HWMAIAHSKAYD 355 (653)
Q Consensus 279 vd~Fa~YA~~vf~~fGD--rVk~WiT~NEP~v~~~~GY~~G~~PPG~~~~~~~~~~~~~~~~~~~a~-h~LLlAHa~Ay~ 355 (653)
.....+|.+.++.+|++ +|..|=.+|||.-... .+.+..+ ..+.+++ ...+ ..|++
T Consensus 105 ~~~l~~~I~~v~~~y~~~g~i~~WDVvNE~i~~~~-------~~~~~r~-----------~~~~~~lG~~yi---~~aF~ 163 (320)
T PF00331_consen 105 RARLENHIKTVVTRYKDKGRIYAWDVVNEAIDDDG-------NPGGLRD-----------SPWYDALGPDYI---ADAFR 163 (320)
T ss_dssp HHHHHHHHHHHHHHTTTTTTESEEEEEES-B-TTS-------SSSSBCT-----------SHHHHHHTTCHH---HHHHH
T ss_pred HHHHHHHHHHHHhHhccccceEEEEEeeecccCCC-------ccccccC-----------ChhhhcccHhHH---HHHHH
Confidence 88999999999999995 8999999999964221 0111111 0111111 0111 35556
Q ss_pred HHHhcCCCCCCeEEEEeecccccCCCcccHHHHHHHhhccCCccccccCCCcceeEeeccCCceeeCCCCcccCCCCCcC
Q 006261 356 YIHAKSTSTKSKVGVAHHVSFMRPYGLFDVTAVTLANTLTTFPYVDSISDRLDFIGINYYGQEVVSGPGLKLVETDEYSE 435 (653)
Q Consensus 356 ~ir~~~~~~~g~IGi~~~~~~~~P~~~~D~~aa~~~n~l~~~p~~d~I~~s~DFiGINYYt~~~V~~~g~~~~~~~~~s~ 435 (653)
..|+..| +.+.=+ +......+ ....+. .+.+ ..+..-.-++|=||+.-.-. .
T Consensus 164 ~A~~~~P--~a~L~~-NDy~~~~~----~k~~~~-~~lv---~~l~~~gvpIdgIG~Q~H~~----~------------- 215 (320)
T PF00331_consen 164 AAREADP--NAKLFY-NDYNIESP----AKRDAY-LNLV---KDLKARGVPIDGIGLQSHFD----A------------- 215 (320)
T ss_dssp HHHHHHT--TSEEEE-EESSTTST----HHHHHH-HHHH---HHHHHTTHCS-EEEEEEEEE----T-------------
T ss_pred HHHHhCC--CcEEEe-ccccccch----HHHHHH-HHHH---HHHHhCCCccceechhhccC----C-------------
Confidence 6666655 344322 22222222 111111 1100 00111123589999975421 0
Q ss_pred CCCccCchHHHHHHHHHHHHhCCCCCCEEEeecCCCCCC-------CcccHHHHHHHHHHHHHHHHcCCCeeEEEEeecc
Q 006261 436 SGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDET-------DLIRRPYVIEHLLAVYAAMITGVPVIGYLFWTIS 508 (653)
Q Consensus 436 ~Gw~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~ad~~-------D~~Ri~YL~~hL~~v~~Ai~dGV~V~GY~~WSLl 508 (653)
+.. |..+...|+++.+ .++||.|||.-+.+.+ +..+..++++.+..+...-.. .|.|.++|.+.
T Consensus 216 -~~~--~~~i~~~l~~~~~----~Gl~i~ITElDv~~~~~~~~~~~~~~qA~~~~~~~~~~~~~~~~--~v~git~Wg~~ 286 (320)
T PF00331_consen 216 -GYP--PEQIWNALDRFAS----LGLPIHITELDVRDDDNPPDAEEEEAQAEYYRDFLTACFSHPPA--AVEGITWWGFT 286 (320)
T ss_dssp -TSS--HHHHHHHHHHHHT----TTSEEEEEEEEEESSSTTSCHHHHHHHHHHHHHHHHHHHHTTHC--TEEEEEESSSB
T ss_pred -CCC--HHHHHHHHHHHHH----cCCceEEEeeeecCCCCCcchHHHHHHHHHHHHHHHHHHhCCcc--CCCEEEEECCC
Confidence 001 6778888877643 3699999999988643 334667777777654332212 89999999999
Q ss_pred cccCCcCCCCCcc-ceEEEcCCCCccccccchHHHHHH
Q 006261 509 DNWEWADGYGPKF-GLVAVDRANNLARIPRPSYHLFTK 545 (653)
Q Consensus 509 DNfEW~~GY~~RF-GL~~VD~~~~l~R~PK~Sa~wY~~ 545 (653)
|+..|-.+..... +|+ |- .-.|||+++.+.+
T Consensus 287 D~~sW~~~~~~~~~~lf--d~----~~~~Kpa~~~~~~ 318 (320)
T PF00331_consen 287 DGYSWRPDTPPDRPLLF--DE----DYQPKPAYDAIVD 318 (320)
T ss_dssp TTGSTTGGHSEG--SSB---T----TSBB-HHHHHHHH
T ss_pred CCCcccCCCCCCCCeeE--CC----CcCCCHHHHHHHh
Confidence 9999987633333 565 32 2379999887765
No 19
>PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 39 GH39 from CAZY comprises enzymes with several known activities; alpha-L-iduronidase (3.2.1.76 from EC); beta-xylosidase (3.2.1.37 from EC). The most highly conserved regions in these enzymes are located in their N-terminal sections. These contain a glutamic acid residue which, on the basis of similarities with other families of glycosyl hydrolases [], probably acts as the proton donor in their catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BS9_D 2BFG_E 1W91_B 1UHV_D 1PX8_A.
Probab=98.82 E-value=1.8e-07 Score=105.27 Aligned_cols=289 Identities=23% Similarity=0.343 Sum_probs=135.3
Q ss_pred ChHHHHHHHH-hcCCCeEEec--c--ccccccC-CCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccc
Q 006261 194 DPDIELKLAK-DTGVSVFRLG--I--DWSRIMP-AEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWA 267 (653)
Q Consensus 194 ~~~eDI~Lmk-elGv~~yRfS--I--sWsRI~P-~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL 267 (653)
++.+.+..++ ++|+..+||- + +..-... ++ +| ...+|+.-+ |+++|.|+++||+|+|.|-. .|.++
T Consensus 40 ~~q~~l~~~~~~~gf~yvR~h~l~~ddm~~~~~~~~--~~-~~~Ynf~~l---D~i~D~l~~~g~~P~vel~f--~p~~~ 111 (486)
T PF01229_consen 40 DWQEQLRELQEELGFRYVRFHGLFSDDMMVYSESDE--DG-IPPYNFTYL---DQILDFLLENGLKPFVELGF--MPMAL 111 (486)
T ss_dssp HHHHHHHHHHCCS--SEEEES-TTSTTTT-EEEEET--TE-EEEE--HHH---HHHHHHHHHCT-EEEEEE-S--B-GGG
T ss_pred HHHHHHHHHHhccCceEEEEEeeccCchhhcccccc--CC-CCcCChHHH---HHHHHHHHHcCCEEEEEEEe--chhhh
Confidence 4566676665 9999999985 2 2222222 11 01 112787655 57999999999999999976 67666
Q ss_pred cc-------cCCCCC-hhhHHHHHHHHHHH----HHHhc-Cccc--eEEEccCcceeeeccccCCCCCCCCCchhhhhhc
Q 006261 268 GE-------YGGWKL-EKTIDYFMDFTRLV----VDSVS-DIVD--YWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATS 332 (653)
Q Consensus 268 ~~-------~GGW~n-~e~vd~Fa~YA~~v----f~~fG-DrVk--~WiT~NEP~v~~~~GY~~G~~PPG~~~~~~~~~~ 332 (653)
.. +.||.+ |+..+.+.++++.+ .+||| +.|. +|.++|||++..+. ..+.
T Consensus 112 ~~~~~~~~~~~~~~~pp~~~~~W~~lv~~~~~h~~~RYG~~ev~~W~fEiWNEPd~~~f~-------~~~~--------- 175 (486)
T PF01229_consen 112 ASGYQTVFWYKGNISPPKDYEKWRDLVRAFARHYIDRYGIEEVSTWYFEIWNEPDLKDFW-------WDGT--------- 175 (486)
T ss_dssp BSS--EETTTTEE-S-BS-HHHHHHHHHHHHHHHHHHHHHHHHTTSEEEESS-TTSTTTS-------GGG----------
T ss_pred cCCCCccccccCCcCCcccHHHHHHHHHHHHHHHHhhcCCccccceeEEeCcCCCccccc-------CCCC---------
Confidence 32 223332 44556666655444 55666 3466 45899999974321 1110
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeecccccCCCcccHHHHHHHhhccCCccccccCCCcceeEe
Q 006261 333 ALPTGVFNQAMHWMAIAHSKAYDYIHAKSTSTKSKVGVAHHVSFMRPYGLFDVTAVTLANTLTTFPYVDSISDRLDFIGI 412 (653)
Q Consensus 333 ~~~~~~~~~a~h~LLlAHa~Ay~~ir~~~~~~~g~IGi~~~~~~~~P~~~~D~~aa~~~n~l~~~p~~d~I~~s~DFiGI 412 (653)
.+.|. .+. ..+++++|+..| ..+||---.+ + +..... ....+ ++..-..++|||.+
T Consensus 176 ---~~ey~----~ly---~~~~~~iK~~~p--~~~vGGp~~~-~----~~~~~~-~~~l~------~~~~~~~~~DfiS~ 231 (486)
T PF01229_consen 176 ---PEEYF----ELY---DATARAIKAVDP--ELKVGGPAFA-W----AYDEWC-EDFLE------FCKGNNCPLDFISF 231 (486)
T ss_dssp ---HHHHH----HHH---HHHHHHHHHH-T--TSEEEEEEEE-T----T-THHH-HHHHH------HHHHCT---SEEEE
T ss_pred ---HHHHH----HHH---HHHHHHHHHhCC--CCcccCcccc-c----cHHHHH-HHHHH------HHhcCCCCCCEEEE
Confidence 01232 223 456777888766 5688743111 1 100110 11101 11122356899999
Q ss_pred eccCCceeeCCCCcccCCCCCcCC-CC-ccCchHHHHHHHHHHHHhCCCCCCEEEeecCCCCC-----CCc-ccHHHHHH
Q 006261 413 NYYGQEVVSGPGLKLVETDEYSES-GR-GVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDE-----TDL-IRRPYVIE 484 (653)
Q Consensus 413 NYYt~~~V~~~g~~~~~~~~~s~~-Gw-~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~ad~-----~D~-~Ri~YL~~ 484 (653)
+.|........ .. ...... .. .++| .+..+...+.+ -..++.|+++||-+.+-. +|. .+..|+..
T Consensus 232 H~y~~~~~~~~----~~-~~~~~~~~~~~~~~-~~~~~~~~~~~-e~~p~~~~~~tE~n~~~~~~~~~~dt~~~aA~i~k 304 (486)
T PF01229_consen 232 HSYGTDSAEDI----NE-NMYERIEDSRRLFP-ELKETRPIIND-EADPNLPLYITEWNASISPRNPQHDTCFKAAYIAK 304 (486)
T ss_dssp EEE-BESESE-----SS--EEEEB--HHHHHH-HHHHHHHHHHT-SSSTT--EEEEEEES-SSTT-GGGGSHHHHHHHHH
T ss_pred Eeccccccccc----ch-hHHhhhhhHHHHHH-HHHHHHHHHhh-ccCCCCceeecccccccCCCcchhccccchhhHHH
Confidence 99986432110 00 000000 00 1111 22222222222 223367899999776532 343 34445444
Q ss_pred HHHHHHHHHHcCCCeeEEEEeecccccCCcCC----CCCccceEEEcCCCCccccccchHHHHHHHHH
Q 006261 485 HLLAVYAAMITGVPVIGYLFWTISDNWEWADG----YGPKFGLVAVDRANNLARIPRPSYHLFTKVVT 548 (653)
Q Consensus 485 hL~~v~~Ai~dGV~V~GY~~WSLlDNfEW~~G----Y~~RFGL~~VD~~~~l~R~PK~Sa~wY~~ii~ 548 (653)
.+ ++ ..|..+-++.+|++.|.||=..- +..-|||+..+ .++|||++.|.-+-+
T Consensus 305 ~l---L~--~~~~~l~~~sywt~sD~Fee~~~~~~pf~ggfGLlt~~------gI~KPa~~A~~~L~~ 361 (486)
T PF01229_consen 305 NL---LS--NDGAFLDSFSYWTFSDRFEENGTPRKPFHGGFGLLTKL------GIPKPAYYAFQLLNK 361 (486)
T ss_dssp -H---HH--HGGGT-SEEEES-SBS---TTSS-SSSSSS-S-SEECC------CEE-HHHHHHHHHTT
T ss_pred HH---HH--hhhhhhhhhhccchhhhhhccCCCCCceecchhhhhcc------CCCchHHHHHHHHHh
Confidence 31 11 24667788999999999984321 33458998765 499999988876544
No 20
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A.
Probab=98.81 E-value=1.1e-08 Score=111.10 Aligned_cols=108 Identities=25% Similarity=0.446 Sum_probs=84.3
Q ss_pred CChHHHHHHHHhcCCCeEEe-ccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccc--
Q 006261 193 SDPDIELKLAKDTGVSVFRL-GIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGE-- 269 (653)
Q Consensus 193 ~~~~eDI~LmkelGv~~yRf-SIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~-- 269 (653)
+.+++|+++||++|+|++|+ .++|++|+|.+ |.+|+.. +|++|+.+.++||++++.+.....|.||.+
T Consensus 10 e~~~~d~~~m~~~G~n~vri~~~~W~~lEP~e------G~ydF~~---lD~~l~~a~~~Gi~viL~~~~~~~P~Wl~~~~ 80 (374)
T PF02449_consen 10 EEWEEDLRLMKEAGFNTVRIGEFSWSWLEPEE------GQYDFSW---LDRVLDLAAKHGIKVILGTPTAAPPAWLYDKY 80 (374)
T ss_dssp CHHHHHHHHHHHHT-SEEEE-CCEHHHH-SBT------TB---HH---HHHHHHHHHCTT-EEEEEECTTTS-HHHHCCS
T ss_pred HHHHHHHHHHHHcCCCEEEEEEechhhccCCC------CeeecHH---HHHHHHHHHhccCeEEEEecccccccchhhhc
Confidence 67899999999999999996 68999999985 8899877 567999999999999999999999999842
Q ss_pred --------------cCCC-----CChhhHHHHHHHHHHHHHHhcCc--cceEEEccCccee
Q 006261 270 --------------YGGW-----KLEKTIDYFMDFTRLVVDSVSDI--VDYWVTFNEPHVF 309 (653)
Q Consensus 270 --------------~GGW-----~n~e~vd~Fa~YA~~vf~~fGDr--Vk~WiT~NEP~v~ 309 (653)
.|+. .++...+++.++++.++++|++. |-.|.+-|||...
T Consensus 81 Pe~~~~~~~g~~~~~g~~~~~~~~~p~yr~~~~~~~~~l~~~y~~~p~vi~~~i~NE~~~~ 141 (374)
T PF02449_consen 81 PEILPVDADGRRRGFGSRQHYCPNSPAYREYARRFIRALAERYGDHPAVIGWQIDNEPGYH 141 (374)
T ss_dssp GCCC-B-TTTSBEECCCSTT-HCCHHHHHHHHHHHHHHHHHHHTTTTTEEEEEECCSTTCT
T ss_pred ccccccCCCCCcCccCCccccchhHHHHHHHHHHHHHHHHhhccccceEEEEEeccccCcC
Confidence 1222 24566778888888899999986 7789999999763
No 21
>COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism]
Probab=98.39 E-value=3.2e-05 Score=82.24 Aligned_cols=263 Identities=22% Similarity=0.327 Sum_probs=155.0
Q ss_pred ccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEE-E-eccCCCCccccccCCCCChhhHHHHHHHHHHHHHH
Q 006261 215 DWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVML-T-LFHHSLPAWAGEYGGWKLEKTIDYFMDFTRLVVDS 292 (653)
Q Consensus 215 sWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiV-T-L~HwDLP~wL~~~GGW~n~e~vd~Fa~YA~~vf~~ 292 (653)
-|.-|+|. +|.+|+++-| .+++.+++|||.--- | +.|--.|.|+... -|..+.+.+...++-..|+.|
T Consensus 68 Kwe~i~p~------~G~f~Fe~AD---~ia~FAr~h~m~lhGHtLvW~~q~P~W~~~~-e~~~~~~~~~~e~hI~tV~~r 137 (345)
T COG3693 68 KWEAIEPE------RGRFNFEAAD---AIANFARKHNMPLHGHTLVWHSQVPDWLFGD-ELSKEALAKMVEEHIKTVVGR 137 (345)
T ss_pred ccccccCC------CCccCccchH---HHHHHHHHcCCeeccceeeecccCCchhhcc-ccChHHHHHHHHHHHHHHHHh
Confidence 47778886 3789998854 699999999987532 3 3466779998521 166789999999999999999
Q ss_pred hcCccceEEEccCcceeeeccccCCCCCCCCCchhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEe
Q 006261 293 VSDIVDYWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSTSTKSKVGVAH 372 (653)
Q Consensus 293 fGDrVk~WiT~NEP~v~~~~GY~~G~~PPG~~~~~~~~~~~~~~~~~~~a~h~LLlAHa~Ay~~ir~~~~~~~g~IGi~~ 372 (653)
|.++|..|=..|||-- ...+|-...|--+.. .. .+ + ..|++.-|+..| +++.=+ +
T Consensus 138 Ykg~~~sWDVVNE~vd-d~g~~R~s~w~~~~~----------gp-d~------I----~~aF~~AreadP--~AkL~~-N 192 (345)
T COG3693 138 YKGSVASWDVVNEAVD-DQGSLRRSAWYDGGT----------GP-DY------I----KLAFHIAREADP--DAKLVI-N 192 (345)
T ss_pred ccCceeEEEecccccC-CCchhhhhhhhccCC----------cc-HH------H----HHHHHHHHhhCC--CceEEe-e
Confidence 9999999999999954 221222111111000 00 11 1 355666677665 455422 2
Q ss_pred ecccccCCCcccHHHHH--HHhhccCCccccccCCCcceeEeeccCCceeeCCCCcccCCCCCcCCCCccCchHHHHHHH
Q 006261 373 HVSFMRPYGLFDVTAVT--LANTLTTFPYVDSISDRLDFIGINYYGQEVVSGPGLKLVETDEYSESGRGVYPDGLFRVLH 450 (653)
Q Consensus 373 ~~~~~~P~~~~D~~aa~--~~n~l~~~p~~d~I~~s~DFiGINYYt~~~V~~~g~~~~~~~~~s~~Gw~i~P~GL~~lL~ 450 (653)
..+ ..+.++.. ..|-+ ..+..-.-+.|=||++-- ++ .+|... +-.+..+.
T Consensus 193 DY~------ie~~~~kr~~~~nlI---~~LkekG~pIDgiG~QsH----~~--------------~~~~~~-~~~~~a~~ 244 (345)
T COG3693 193 DYS------IEGNPAKRNYVLNLI---EELKEKGAPIDGIGIQSH----FS--------------GDGPSI-EKMRAALL 244 (345)
T ss_pred ccc------ccCChHHHHHHHHHH---HHHHHCCCCccceeeeee----ec--------------CCCCCH-HHHHHHHH
Confidence 221 12222221 11110 011111235899998743 11 122222 22333443
Q ss_pred HHHHHhCCCCCCEEEeecCCCCC-C--CcccHHHHHHHH--HHHHHHHHcCCCeeEEEEeecccccCCcCCCCCccc---
Q 006261 451 QFHERYKHLNLPFIITENGVSDE-T--DLIRRPYVIEHL--LAVYAAMITGVPVIGYLFWTISDNWEWADGYGPKFG--- 522 (653)
Q Consensus 451 ~i~~rY~~~~~PI~ITENG~ad~-~--D~~Ri~YL~~hL--~~v~~Ai~dGV~V~GY~~WSLlDNfEW~~GY~~RFG--- 522 (653)
.+.+. ++||+|||--+.+. . +..|..-++... ..-.......-.|.+.+.|.++|+++|..|..++++
T Consensus 245 ~~~k~----Gl~i~VTELD~~~~~P~~~~p~~~~~~~~~~~~~f~~~~~~~~~v~~it~WGi~D~ySWl~g~~~~~~~~r 320 (345)
T COG3693 245 KFSKL----GLPIYVTELDMSDYTPDSGAPRLYLQKAASRAKAFLLLLLNPNQVKAITFWGITDRYSWLRGRDPRRDGLR 320 (345)
T ss_pred HHhhc----CCCceEEEeeeeccCCCCccHHHHHHHHHHHHHHHHHHHhcccccceEEEeeeccCcccccCCccCcCCCC
Confidence 33322 59999999998862 2 222322222221 111222345666999999999999999999888885
Q ss_pred -eEEEcCCCCccccccchHHHHHHHHHc
Q 006261 523 -LVAVDRANNLARIPRPSYHLFTKVVTT 549 (653)
Q Consensus 523 -L~~VD~~~~l~R~PK~Sa~wY~~ii~~ 549 (653)
|. +|- + =.|||...+.+++...
T Consensus 321 Pl~-~D~--n--~~pKPa~~aI~e~la~ 343 (345)
T COG3693 321 PLL-FDD--N--YQPKPAYKAIAEVLAP 343 (345)
T ss_pred Ccc-cCC--C--CCcchHHHHHHHHhcC
Confidence 22 232 2 3799999999877654
No 22
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A ....
Probab=98.23 E-value=5.3e-05 Score=79.80 Aligned_cols=92 Identities=16% Similarity=0.198 Sum_probs=60.3
Q ss_pred CCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccccC
Q 006261 192 WSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYG 271 (653)
Q Consensus 192 y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~~G 271 (653)
...++.|+.+||++|+|++|++- .|.. .++++.|-+.||-++.-+..+..-.|. ..|
T Consensus 35 ~~~~~~d~~l~k~~G~N~iR~~h-----~p~~-----------------~~~~~~cD~~GilV~~e~~~~~~~~~~-~~~ 91 (298)
T PF02836_consen 35 DEAMERDLELMKEMGFNAIRTHH-----YPPS-----------------PRFYDLCDELGILVWQEIPLEGHGSWQ-DFG 91 (298)
T ss_dssp HHHHHHHHHHHHHTT-SEEEETT-----S--S-----------------HHHHHHHHHHT-EEEEE-S-BSCTSSS-STS
T ss_pred HHHHHHHHHHHHhcCcceEEccc-----ccCc-----------------HHHHHHHhhcCCEEEEeccccccCccc-cCC
Confidence 45678999999999999999943 2321 246778888999998776442221111 111
Q ss_pred C----CCChhhHHHHHHHHHHHHHHhcCc--cceEEEccCc
Q 006261 272 G----WKLEKTIDYFMDFTRLVVDSVSDI--VDYWVTFNEP 306 (653)
Q Consensus 272 G----W~n~e~vd~Fa~YA~~vf~~fGDr--Vk~WiT~NEP 306 (653)
- -.+++..+.+.+=.+.+++++.+. |-.|...||+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~v~~~~NHPSIi~W~~gNE~ 132 (298)
T PF02836_consen 92 NCNYDADDPEFRENAEQELREMVRRDRNHPSIIMWSLGNES 132 (298)
T ss_dssp CTSCTTTSGGHHHHHHHHHHHHHHHHTT-TTEEEEEEEESS
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHcCcCcCchheeecCccC
Confidence 0 125778888888888888888776 7788888887
No 23
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism]
Probab=97.76 E-value=0.017 Score=61.45 Aligned_cols=241 Identities=23% Similarity=0.344 Sum_probs=136.0
Q ss_pred HHHHHHHHhcCCCeEEeccccccccCCCC-CCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEec---cCCCCccccccC
Q 006261 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEP-VNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF---HHSLPAWAGEYG 271 (653)
Q Consensus 196 ~eDI~LmkelGv~~yRfSIsWsRI~P~~~-~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~---HwDLP~wL~~~G 271 (653)
++=++.+|+.|+|..|+-| |- -|... -.|..|.-|. ++---.+-.+.+.+||++++..| ||.=|..-.+.-
T Consensus 66 qD~~~iLK~~GvNyvRlRv-wn--dP~dsngn~yggGnnD--~~k~ieiakRAk~~GmKVl~dFHYSDfwaDPakQ~kPk 140 (403)
T COG3867 66 QDALQILKNHGVNYVRLRV-WN--DPYDSNGNGYGGGNND--LKKAIEIAKRAKNLGMKVLLDFHYSDFWADPAKQKKPK 140 (403)
T ss_pred HHHHHHHHHcCcCeEEEEE-ec--CCccCCCCccCCCcch--HHHHHHHHHHHHhcCcEEEeeccchhhccChhhcCCcH
Confidence 3446999999999999865 21 12110 0011111221 22234577788999999999998 566676555556
Q ss_pred CCCC---hhhHHHHHHHHHHHHHHh---cCccceEEEccCcceeeeccccCCCCCCCCCchhhhhhcCCCchhHHHHHHH
Q 006261 272 GWKL---EKTIDYFMDFTRLVVDSV---SDIVDYWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATSALPTGVFNQAMHW 345 (653)
Q Consensus 272 GW~n---~e~vd~Fa~YA~~vf~~f---GDrVk~WiT~NEP~v~~~~GY~~G~~PPG~~~~~~~~~~~~~~~~~~~a~h~ 345 (653)
.|.+ ++.-...-+|.+.+...+ |-..+.-..=||-+- |+ .||-|... .+.. +-.
T Consensus 141 aW~~l~fe~lk~avy~yTk~~l~~m~~eGi~pdmVQVGNEtn~----gf---lwp~Ge~~------------~f~k-~a~ 200 (403)
T COG3867 141 AWENLNFEQLKKAVYSYTKYVLTTMKKEGILPDMVQVGNETNG----GF---LWPDGEGR------------NFDK-MAA 200 (403)
T ss_pred HhhhcCHHHHHHHHHHHHHHHHHHHHHcCCCccceEeccccCC----ce---eccCCCCc------------ChHH-HHH
Confidence 7876 333445556666665555 544555556677652 11 36655421 1212 223
Q ss_pred HHHHHHHHHHHHHhcCCCCCCeEEEEeecccccCCCcccHHHHHHHhhccCCcccccc---CCCcceeEeeccCCceeeC
Q 006261 346 MAIAHSKAYDYIHAKSTSTKSKVGVAHHVSFMRPYGLFDVTAVTLANTLTTFPYVDSI---SDRLDFIGINYYGQEVVSG 422 (653)
Q Consensus 346 LLlAHa~Ay~~ir~~~~~~~g~IGi~~~~~~~~P~~~~D~~aa~~~n~l~~~p~~d~I---~~s~DFiGINYYt~~~V~~ 422 (653)
|+ .++++++|+..| ..+ |++|...-.-.+.... ++|.| .-.+|.||++||+- +.
T Consensus 201 L~---n~g~~avrev~p--~ik--v~lHla~g~~n~~y~~-------------~fd~ltk~nvdfDVig~SyYpy--Wh- 257 (403)
T COG3867 201 LL---NAGIRAVREVSP--TIK--VALHLAEGENNSLYRW-------------IFDELTKRNVDFDVIGSSYYPY--WH- 257 (403)
T ss_pred HH---HHHhhhhhhcCC--Cce--EEEEecCCCCCchhhH-------------HHHHHHHcCCCceEEeeecccc--cc-
Confidence 55 355666777655 333 4555432211111111 11222 34689999999963 21
Q ss_pred CCCcccCCCCCcCCCCccCchHHHHHHHHHHHHhCCCCCCEEEeecCCCC-C--------------CC-------cccHH
Q 006261 423 PGLKLVETDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSD-E--------------TD-------LIRRP 480 (653)
Q Consensus 423 ~g~~~~~~~~~s~~Gw~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~ad-~--------------~D-------~~Ri~ 480 (653)
---..|...|..+..||. +.++|.|.+..- . .+ .....
T Consensus 258 -----------------gtl~nL~~nl~dia~rY~---K~VmV~Etay~yTlEdgDg~~Nt~~~~~~t~~ypitVQGQat 317 (403)
T COG3867 258 -----------------GTLNNLTTNLNDIASRYH---KDVMVVETAYTYTLEDGDGHENTFPSSEQTGGYPITVQGQAT 317 (403)
T ss_pred -----------------CcHHHHHhHHHHHHHHhc---CeEEEEEecceeeeccCCCCCCcCCcccccCCCceEEechhh
Confidence 112357788999999996 789999998851 0 01 12455
Q ss_pred HHHHHHHHHHHHHHcCCCeeEEEEee
Q 006261 481 YVIEHLLAVYAAMITGVPVIGYLFWT 506 (653)
Q Consensus 481 YL~~hL~~v~~Ai~dGV~V~GY~~WS 506 (653)
++++-++.|..- -+.+=.|.|+|-
T Consensus 318 ~vrDvie~V~nv--p~~~GlGvFYWE 341 (403)
T COG3867 318 FVRDVIEAVKNV--PKSNGLGVFYWE 341 (403)
T ss_pred HHHHHHHHHHhC--CCCCceEEEEec
Confidence 677766654322 234458999994
No 24
>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed
Probab=97.56 E-value=0.0043 Score=76.29 Aligned_cols=220 Identities=17% Similarity=0.230 Sum_probs=128.2
Q ss_pred CCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEe----ccCCCCccc
Q 006261 192 WSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTL----FHHSLPAWA 267 (653)
Q Consensus 192 y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL----~HwDLP~wL 267 (653)
...++.|+++||++|+|++|+| ..|.. ..+.+.|=+.||-.|.-. +.|.....+
T Consensus 354 ~e~~~~dl~lmK~~g~NavR~s-----HyP~~-----------------~~fydlcDe~GllV~dE~~~e~~g~~~~~~~ 411 (1021)
T PRK10340 354 MDRVEKDIQLMKQHNINSVRTA-----HYPND-----------------PRFYELCDIYGLFVMAETDVESHGFANVGDI 411 (1021)
T ss_pred HHHHHHHHHHHHHCCCCEEEec-----CCCCC-----------------HHHHHHHHHCCCEEEECCcccccCccccccc
Confidence 4678999999999999999996 35542 146778888999877643 112111100
Q ss_pred cccCCC--CChhhHHHHHHHHHHHHHHhcCc--cceEEEccCcceeeeccccCCCCCCCCCchhhhhhcCCCchhHHHHH
Q 006261 268 GEYGGW--KLEKTIDYFMDFTRLVVDSVSDI--VDYWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATSALPTGVFNQAM 343 (653)
Q Consensus 268 ~~~GGW--~n~e~vd~Fa~YA~~vf~~fGDr--Vk~WiT~NEP~v~~~~GY~~G~~PPG~~~~~~~~~~~~~~~~~~~a~ 343 (653)
.| .++...+.|.+=++.++++.... |-.|..-||.. + | .
T Consensus 412 ----~~~~~~p~~~~~~~~~~~~mV~RdrNHPSIi~WslGNE~~------~-------g------------------~-- 454 (1021)
T PRK10340 412 ----SRITDDPQWEKVYVDRIVRHIHAQKNHPSIIIWSLGNESG------Y-------G------------------C-- 454 (1021)
T ss_pred ----ccccCCHHHHHHHHHHHHHHHHhCCCCCEEEEEECccCcc------c-------c------------------H--
Confidence 01 23445566777788889998766 55677777741 0 0 0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCeEEEEeecccccCCCcccHHHHHHHhhccCCccccccCCCcceeEeeccCCceeeCC
Q 006261 344 HWMAIAHSKAYDYIHAKSTSTKSKVGVAHHVSFMRPYGLFDVTAVTLANTLTTFPYVDSISDRLDFIGINYYGQEVVSGP 423 (653)
Q Consensus 344 h~LLlAHa~Ay~~ir~~~~~~~g~IGi~~~~~~~~P~~~~D~~aa~~~n~l~~~p~~d~I~~s~DFiGINYYt~~~V~~~ 423 (653)
+ |..+++.+|+..++ +. +... + + ......|++|.+| ..
T Consensus 455 -~----~~~~~~~~k~~Dpt---R~-v~~~-------~--~-----------------~~~~~~Dv~~~~Y-~~------ 492 (1021)
T PRK10340 455 -N----IRAMYHAAKALDDT---RL-VHYE-------E--D-----------------RDAEVVDVISTMY-TR------ 492 (1021)
T ss_pred -H----HHHHHHHHHHhCCC---ce-EEeC-------C--C-----------------cCccccceecccc-CC------
Confidence 1 24556777877653 21 1100 0 0 0123468887543 21
Q ss_pred CCcccCCCCCcCCCCccCchHHHHHHHHHHHHhCCCCCCEEEeecCCCCCCCcccHHHHHHHHHHHHHHHHcCCCeeEEE
Q 006261 424 GLKLVETDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDETDLIRRPYVIEHLLAVYAAMITGVPVIGYL 503 (653)
Q Consensus 424 g~~~~~~~~~s~~Gw~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~ad~~D~~Ri~YL~~hL~~v~~Ai~dGV~V~GY~ 503 (653)
...+....+... ++|++++|.|.+..+...- +.++. ++++.-=.+.|=|
T Consensus 493 ----------------------~~~~~~~~~~~~--~kP~i~~Ey~hamgn~~g~---~~~yw----~~~~~~p~l~Ggf 541 (1021)
T PRK10340 493 ----------------------VELMNEFGEYPH--PKPRILCEYAHAMGNGPGG---LTEYQ----NVFYKHDCIQGHY 541 (1021)
T ss_pred ----------------------HHHHHHHHhCCC--CCcEEEEchHhccCCCCCC---HHHHH----HHHHhCCceeEEe
Confidence 011222222222 5999999998775432211 23333 4565566799999
Q ss_pred EeecccccCCc---C-----CCCCcc------------ceEEEcCCCCccccccchHHHHHHHHHc
Q 006261 504 FWTISDNWEWA---D-----GYGPKF------------GLVAVDRANNLARIPRPSYHLFTKVVTT 549 (653)
Q Consensus 504 ~WSLlDNfEW~---~-----GY~~RF------------GL~~VD~~~~l~R~PK~Sa~wY~~ii~~ 549 (653)
+|..+|---.. + +|.--| ||+. ..|+|||+++.|+++.+-
T Consensus 542 iW~~~D~~~~~~~~~G~~~~~ygGd~g~~p~~~~f~~~Glv~------~dr~p~p~~~e~k~~~~p 601 (1021)
T PRK10340 542 VWEWCDHGIQAQDDNGNVWYKYGGDYGDYPNNYNFCIDGLIY------PDQTPGPGLKEYKQVIAP 601 (1021)
T ss_pred eeecCcccccccCCCCCEEEEECCCCCCCCCCcCcccceeEC------CCCCCChhHHHHHHhcce
Confidence 99999941110 1 132222 5542 247999999999999764
No 25
>COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism]
Probab=97.29 E-value=0.00046 Score=80.48 Aligned_cols=125 Identities=22% Similarity=0.319 Sum_probs=91.7
Q ss_pred CCCccccccCCCChHHHHHHHHhcCCCeEEe-ccccccccCCCCCCCCCCcCChHHHHHHHHH-HHHHHHcCCeEEEEe-
Q 006261 182 VPHPEERLRFWSDPDIELKLAKDTGVSVFRL-GIDWSRIMPAEPVNGLKETVNFAALERYKWI-INRVRSYGMKVMLTL- 258 (653)
Q Consensus 182 ~~~~~~a~~~y~~~~eDI~LmkelGv~~yRf-SIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~L-Id~L~~~GIePiVTL- 258 (653)
.++|++..+ .-+++|+++||++|+|++|. =++|++++|+. |.+|...+| .. |+.+.+.||..++.=
T Consensus 21 ~y~p~~~p~--~~w~ddl~~mk~~G~N~V~ig~faW~~~eP~e------G~fdf~~~D---~~~l~~a~~~Gl~vil~t~ 89 (673)
T COG1874 21 DYYPERWPR--ETWMDDLRKMKALGLNTVRIGYFAWNLHEPEE------GKFDFTWLD---EIFLERAYKAGLYVILRTG 89 (673)
T ss_pred ccChHHCCH--HHHHHHHHHHHHhCCCeeEeeeEEeeccCccc------cccCcccch---HHHHHHHHhcCceEEEecC
Confidence 566777666 77899999999999999999 66999999985 889998554 44 999999999999876
Q ss_pred ccCCCCcccc----------------ccCCCCChhhHHH-HHHHHHH----HHHH-hcCc--cceEEEccCcce-eeecc
Q 006261 259 FHHSLPAWAG----------------EYGGWKLEKTIDY-FMDFTRL----VVDS-VSDI--VDYWVTFNEPHV-FCMLT 313 (653)
Q Consensus 259 ~HwDLP~wL~----------------~~GGW~n~e~vd~-Fa~YA~~----vf~~-fGDr--Vk~WiT~NEP~v-~~~~G 313 (653)
--...|.|+. ..|+|.+-+.+.- +..|++. +.++ ||+. |--|-+=||=.. .|+..
T Consensus 90 P~g~~P~Wl~~~~PeiL~~~~~~~~~~~g~r~~~~~~~~~Yr~~~~~i~~~irer~~~~~~~v~~w~~dneY~~~~~~~~ 169 (673)
T COG1874 90 PTGAPPAWLAKKYPEILAVDENGRVRSDGARENICPVSPVYREYLDRILQQIRERLYGNGPAVITWQNDNEYGGHPCYCD 169 (673)
T ss_pred CCCCCchHHhcCChhheEecCCCcccCCCcccccccccHHHHHHHHHHHHHHHHHHhccCCceeEEEccCccCCcccccc
Confidence 4455667752 2488976555544 7777777 6666 6655 677888886332 34444
Q ss_pred ccCC
Q 006261 314 YCAG 317 (653)
Q Consensus 314 Y~~G 317 (653)
|+.+
T Consensus 170 ~~~~ 173 (673)
T COG1874 170 YCQA 173 (673)
T ss_pred ccHH
Confidence 4433
No 26
>COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism]
Probab=97.17 E-value=0.0021 Score=71.23 Aligned_cols=110 Identities=16% Similarity=0.253 Sum_probs=80.5
Q ss_pred HHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCC-hHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccc----c
Q 006261 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVN-FAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGE----Y 270 (653)
Q Consensus 196 ~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN-~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~----~ 270 (653)
++|+..||+.|+|+.|..|.|-.+.+.. +....+. ...+.+-+++|+..++.||.+++.||+..-.+--.+ .
T Consensus 76 ~~~~~~ik~~G~n~VRiPi~~~~~~~~~---~~~p~~~~~~~~~~ld~~I~~a~~~gi~V~iD~H~~~~~~~~~~~s~~~ 152 (407)
T COG2730 76 EEDFDQIKSAGFNAVRIPIGYWALQATD---GDNPYLIGLTQLKILDEAINWAKKLGIYVLIDLHGYPGGNNGHEHSGYT 152 (407)
T ss_pred hhHHHHHHHcCCcEEEcccchhhhhccC---CCCCCeecchHHHHHHHHHHHHHhcCeeEEEEecccCCCCCCcCccccc
Confidence 8999999999999999999965554421 0011222 444558899999999999999999999663332222 1
Q ss_pred CCCC-ChhhHHHHHHHHHHHHHHhcCc--cceEEEccCcce
Q 006261 271 GGWK-LEKTIDYFMDFTRLVVDSVSDI--VDYWVTFNEPHV 308 (653)
Q Consensus 271 GGW~-n~e~vd~Fa~YA~~vf~~fGDr--Vk~WiT~NEP~v 308 (653)
+.+. ....++++.+--..++.+|++. |--..++|||+-
T Consensus 153 ~~~~~~~~~~~~~~~~w~~ia~~f~~~~~VIg~~~~NEP~~ 193 (407)
T COG2730 153 SDYKEENENVEATIDIWKFIANRFKNYDTVIGFELINEPNG 193 (407)
T ss_pred ccccccchhHHHHHHHHHHHHHhccCCCceeeeeeecCCcc
Confidence 2232 4677899999999999999984 333568999985
No 27
>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins.
Probab=97.03 E-value=0.0043 Score=63.99 Aligned_cols=78 Identities=24% Similarity=0.408 Sum_probs=56.8
Q ss_pred CCcceeEeeccCCceeeCCCCcccCCCCCcCCCCccCchHHHHHHHHHHHHhCCCCCCEEEeecCCCC----CCCcccHH
Q 006261 405 DRLDFIGINYYGQEVVSGPGLKLVETDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSD----ETDLIRRP 480 (653)
Q Consensus 405 ~s~DFiGINYYt~~~V~~~g~~~~~~~~~s~~Gw~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~ad----~~D~~Ri~ 480 (653)
..+||++||+|.. .+.++...|..++++|+ +||+|||.|+.+ .++.....
T Consensus 136 ~~~D~iavH~Y~~-----------------------~~~~~~~~i~~~~~~~~---kPIWITEf~~~~~~~~~~~~~~~~ 189 (239)
T PF11790_consen 136 CRVDFIAVHWYGG-----------------------DADDFKDYIDDLHNRYG---KPIWITEFGCWNGGSQGSDEQQAS 189 (239)
T ss_pred CCccEEEEecCCc-----------------------CHHHHHHHHHHHHHHhC---CCEEEEeecccCCCCCCCHHHHHH
Confidence 4789999999921 14568889999999996 999999999753 23445566
Q ss_pred HHHHHHHHHHHHHHcCCCeeEEEEeecccccC
Q 006261 481 YVIEHLLAVYAAMITGVPVIGYLFWTISDNWE 512 (653)
Q Consensus 481 YL~~hL~~v~~Ai~dGV~V~GY~~WSLlDNfE 512 (653)
|+++.+.. ++.---|.+|++.+.++...
T Consensus 190 fl~~~~~~----ld~~~~VeryawF~~~~~~~ 217 (239)
T PF11790_consen 190 FLRQALPW----LDSQPYVERYAWFGFMNDGS 217 (239)
T ss_pred HHHHHHHH----HhcCCCeeEEEecccccccC
Confidence 76666554 44446689999998554433
No 28
>PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B.
Probab=96.87 E-value=0.3 Score=53.98 Aligned_cols=275 Identities=19% Similarity=0.255 Sum_probs=112.8
Q ss_pred HhcCCCeEEecc---cc------------ccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccc
Q 006261 203 KDTGVSVFRLGI---DW------------SRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWA 267 (653)
Q Consensus 203 kelGv~~yRfSI---sW------------sRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL 267 (653)
+.+|++.+||.| ++ .|.+-. ...+|.+|+.+=+--+.++...+++|+.-++ +|-+.-|.|+
T Consensus 57 ~GlGLSI~RyNIGgGs~~~~d~~~i~~~~rr~e~f---~~~dg~yDW~~D~gQrwfL~~Ak~rGV~~f~-aFSNSPP~~M 132 (384)
T PF14587_consen 57 KGLGLSIWRYNIGGGSAEQGDSSGIRDPWRRAESF---LPADGSYDWDADAGQRWFLKAAKERGVNIFE-AFSNSPPWWM 132 (384)
T ss_dssp -S---S-EEEE---STTTTTTSS--SSSTT----S---B-TTS-B-TTSSHHHHHHHHHHHHTT---EE-EE-SSS-GGG
T ss_pred CCceeeeeeeccccCCcccccCccCCCcccCCccc---cCCCCCcCCCCCHHHHHHHHHHHHcCCCeEE-EeecCCCHHH
Confidence 458999999987 33 332211 1124677776655567799999999999765 7777777776
Q ss_pred cccC----C-----CCChhhHHHHHHHHHHHHHHh---cCccceEEEccCcceeeeccccCCCCCCCCCchhhhhhcCCC
Q 006261 268 GEYG----G-----WKLEKTIDYFMDFTRLVVDSV---SDIVDYWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATSALP 335 (653)
Q Consensus 268 ~~~G----G-----W~n~e~vd~Fa~YA~~vf~~f---GDrVk~WiT~NEP~v~~~~GY~~G~~PPG~~~~~~~~~~~~~ 335 (653)
...| + =+.++..+.|++|-..|+++| |=.|+|-.+||||..- +. .|.. .|+.
T Consensus 133 T~NG~~~g~~~~~~NLk~d~y~~FA~YLa~Vv~~~~~~GI~f~~IsP~NEP~~~-W~---~~~Q-EG~~----------- 196 (384)
T PF14587_consen 133 TKNGSASGGDDGSDNLKPDNYDAFADYLADVVKHYKKWGINFDYISPFNEPQWN-WA---GGSQ-EGCH----------- 196 (384)
T ss_dssp SSSSSSB-S-SSS-SS-TT-HHHHHHHHHHHHHHHHCTT--EEEEE--S-TTS--GG-----SS--B-------------
T ss_pred hcCCCCCCCCccccccChhHHHHHHHHHHHHHHHHHhcCCccceeCCcCCCCCC-CC---CCCc-CCCC-----------
Confidence 4322 1 245777888888888888877 5569999999999832 21 1100 0111
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeecccccCCCc-c-cHHHHHHHhhccC---CccccccCCCccee
Q 006261 336 TGVFNQAMHWMAIAHSKAYDYIHAKSTSTKSKVGVAHHVSFMRPYGL-F-DVTAVTLANTLTT---FPYVDSISDRLDFI 410 (653)
Q Consensus 336 ~~~~~~a~h~LLlAHa~Ay~~ir~~~~~~~g~IGi~~~~~~~~P~~~-~-D~~aa~~~n~l~~---~p~~d~I~~s~DFi 410 (653)
... .-...++++=. ..+++.. ...+|.+.-...+-+-+.. . +.......+.++. -.++..+..-...|
T Consensus 197 ~~~--~e~a~vI~~L~---~~L~~~G--L~t~I~~~Ea~~~~~l~~~~~~~~~r~~~i~~ff~~~s~~yi~~l~~v~~~i 269 (384)
T PF14587_consen 197 FTN--EEQADVIRALD---KALKKRG--LSTKISACEAGDWEYLYKTDKNDWGRGNQIEAFFNPDSSTYIGDLPNVPNII 269 (384)
T ss_dssp --H--HHHHHHHHHHH---HHHHHHT---S-EEEEEEESSGGGGS---S-TTS---HHHHHHSTTSTT--TT-TTEEEEE
T ss_pred CCH--HHHHHHHHHHH---HHHHhcC--CCceEEecchhhHHHHhhccCCchhhhhhHHhhcCCCchhhhhccccchhhe
Confidence 000 00112222111 2233332 2456776665555433321 0 0000000011100 01111122222333
Q ss_pred EeeccCCceeeCCCCcccCCCCCcCCCCccCchHHHHHHHHHHHHhCCCCCCEEEeecCCCCCC-------CcccHHHHH
Q 006261 411 GINYYGQEVVSGPGLKLVETDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDET-------DLIRRPYVI 483 (653)
Q Consensus 411 GINYYt~~~V~~~g~~~~~~~~~s~~Gw~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~ad~~-------D~~Ri~YL~ 483 (653)
+-+-|-+ ...+. .-..+|+.|..-.++|+. +..++-||-.+-..+ ...|-..+.
T Consensus 270 ~~HsYwt-----------------~~~~~-~l~~~R~~~~~~~~~~~~-~~~~wqtE~~il~~~~~~~~~~g~~~~~~m~ 330 (384)
T PF14587_consen 270 SGHSYWT-----------------DSPWD-DLRDIRKQLADKLDKYSP-GLKYWQTEYCILGDNYEIIEGGGYDRDLGMD 330 (384)
T ss_dssp EE--TT------------------SSSHH-HHHHHHHHHHHHHHTTSS---EEEE----S----TTT-SSS-HHHHHHH-
T ss_pred eeccccc-----------------CCCHH-HHHHHHHHHHHHHHhhCc-CCceeeeeeeeccCCcccccCCCcccchhHH
Confidence 3332211 11110 112345556666677732 578999999986421 112555554
Q ss_pred HHHHHHHHHHH---cCCCeeEEEEeecccccCCcCCCCCccceEEEcCCC
Q 006261 484 EHLLAVYAAMI---TGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRAN 530 (653)
Q Consensus 484 ~hL~~v~~Ai~---dGV~V~GY~~WSLlDNfEW~~GY~~RFGL~~VD~~~ 530 (653)
--|. |.+-|- -=.++...-+|.-+.-+.|.+ ||++||..+
T Consensus 331 ~aLy-~arviH~DL~~anassW~wW~a~~~~~ykd------gli~i~~~~ 373 (384)
T PF14587_consen 331 TALY-VARVIHNDLTYANASSWQWWTAISPYDYKD------GLIYIDKNK 373 (384)
T ss_dssp -HHH-HHHHHHHHHHTS--SEEEEEESEESS--SS------SSEEEE-ST
T ss_pred HHHH-HHHHHHhhhhhcccchhHHHHHhccccccC------ceEEEcCCC
Confidence 4443 233342 246788899998887655554 999999753
No 29
>PRK09525 lacZ beta-D-galactosidase; Reviewed
Probab=96.79 E-value=0.083 Score=65.27 Aligned_cols=89 Identities=15% Similarity=0.096 Sum_probs=59.6
Q ss_pred CCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEec---cCCCCcccc
Q 006261 192 WSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF---HHSLPAWAG 268 (653)
Q Consensus 192 y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~---HwDLP~wL~ 268 (653)
...++.||++||++|+|++|+| ..|.. ..+.+.|=+.||-.|--.. |--.|..
T Consensus 370 ~e~~~~di~lmK~~g~NaVR~s-----HyP~~-----------------p~fydlcDe~GilV~dE~~~e~hg~~~~~-- 425 (1027)
T PRK09525 370 EETMVQDILLMKQHNFNAVRCS-----HYPNH-----------------PLWYELCDRYGLYVVDEANIETHGMVPMN-- 425 (1027)
T ss_pred HHHHHHHHHHHHHCCCCEEEec-----CCCCC-----------------HHHHHHHHHcCCEEEEecCccccCCcccc--
Confidence 3567899999999999999996 34432 1356777789998886642 2111110
Q ss_pred ccCCCCChhhHHHHHHHHHHHHHHhcCc--cceEEEccCc
Q 006261 269 EYGGWKLEKTIDYFMDFTRLVVDSVSDI--VDYWVTFNEP 306 (653)
Q Consensus 269 ~~GGW~n~e~vd~Fa~YA~~vf~~fGDr--Vk~WiT~NEP 306 (653)
. ...+++..+.+.+=++.++++.... |-.|...||+
T Consensus 426 ~--~~~dp~~~~~~~~~~~~mV~RdrNHPSIi~WSlgNE~ 463 (1027)
T PRK09525 426 R--LSDDPRWLPAMSERVTRMVQRDRNHPSIIIWSLGNES 463 (1027)
T ss_pred C--CCCCHHHHHHHHHHHHHHHHhCCCCCEEEEEeCccCC
Confidence 0 0124666677777778888888766 6677777775
No 30
>PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane. It includes Candida albicans (Yeast) pH-regulated protein, which is required for apical growth and plays a role in morphogenesis and Saccharomyces cerevisiae glycolipid anchored surface protein.; PDB: 2W61_A 2W62_A 2W63_A.
Probab=96.74 E-value=0.068 Score=57.43 Aligned_cols=47 Identities=19% Similarity=0.287 Sum_probs=32.7
Q ss_pred hHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEecc
Q 006261 195 PDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFH 260 (653)
Q Consensus 195 ~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~H 260 (653)
.+.|+.+||+||+|+.|.= -|-|. . + .+.-+..|-+.||-.++.|--
T Consensus 55 C~rDi~~l~~LgiNtIRVY----~vdp~---------~-----n-Hd~CM~~~~~aGIYvi~Dl~~ 101 (314)
T PF03198_consen 55 CKRDIPLLKELGINTIRVY----SVDPS---------K-----N-HDECMSAFADAGIYVILDLNT 101 (314)
T ss_dssp HHHHHHHHHHHT-SEEEES-------TT---------S--------HHHHHHHHHTT-EEEEES-B
T ss_pred HHHhHHHHHHcCCCEEEEE----EeCCC---------C-----C-HHHHHHHHHhCCCEEEEecCC
Confidence 4679999999999999962 23343 1 2 477889999999999999964
No 31
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B ....
Probab=95.99 E-value=0.013 Score=63.09 Aligned_cols=97 Identities=16% Similarity=0.206 Sum_probs=60.7
Q ss_pred CChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEec-----cC---CCC
Q 006261 193 SDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF-----HH---SLP 264 (653)
Q Consensus 193 ~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~-----Hw---DLP 264 (653)
..|++-++.||++|+|++-+-|.|.-.+|.+ |.+|++|..=-+.+|+.+.++|+..++-.= -| .+|
T Consensus 24 ~~W~~~l~k~ka~G~n~v~~yv~W~~he~~~------g~~df~g~~dl~~f~~~a~~~gl~vilrpGpyi~aE~~~gG~P 97 (319)
T PF01301_consen 24 EYWRDRLQKMKAAGLNTVSTYVPWNLHEPEE------GQFDFTGNRDLDRFLDLAQENGLYVILRPGPYICAEWDNGGLP 97 (319)
T ss_dssp GGHHHHHHHHHHTT-SEEEEE--HHHHSSBT------TB---SGGG-HHHHHHHHHHTT-EEEEEEES---TTBGGGG--
T ss_pred hHHHHHHHHHHhCCcceEEEeccccccCCCC------CcccccchhhHHHHHHHHHHcCcEEEecccceecccccchhhh
Confidence 3467899999999999999999999999985 789999977778999999999999776421 13 489
Q ss_pred cccccc-CCCCChhhHHHHHHHHHHHHHHhcCc
Q 006261 265 AWAGEY-GGWKLEKTIDYFMDFTRLVVDSVSDI 296 (653)
Q Consensus 265 ~wL~~~-GGW~n~e~vd~Fa~YA~~vf~~fGDr 296 (653)
.||... +... +..-..|.++++.-++.+...
T Consensus 98 ~Wl~~~~~~~~-R~~~~~~~~~~~~~~~~~~~~ 129 (319)
T PF01301_consen 98 AWLLRKPDIRL-RTNDPPFLEAVERWYRALAKI 129 (319)
T ss_dssp GGGGGSTTS-S-SSS-HHHHHHHHHHHHHHHHH
T ss_pred hhhhccccccc-cccchhHHHHHHHHHHHHHHH
Confidence 999765 3332 333344444444444444333
No 32
>PLN03059 beta-galactosidase; Provisional
Probab=95.33 E-value=0.14 Score=61.56 Aligned_cols=113 Identities=17% Similarity=0.234 Sum_probs=83.1
Q ss_pred CChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEe--------ccCCCC
Q 006261 193 SDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTL--------FHHSLP 264 (653)
Q Consensus 193 ~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL--------~HwDLP 264 (653)
+.|++=++.||++|+|+.-.=|.|.-.+|.+ |.+|++|..=..++|+.+.+.|+-.|+-. -.-.+|
T Consensus 59 ~~W~d~L~k~Ka~GlNtV~tYV~Wn~HEp~~------G~~dF~G~~DL~~Fl~la~e~GLyvilRpGPYIcAEw~~GGlP 132 (840)
T PLN03059 59 EMWPDLIQKAKDGGLDVIQTYVFWNGHEPSP------GNYYFEDRYDLVKFIKVVQAAGLYVHLRIGPYICAEWNFGGFP 132 (840)
T ss_pred HHHHHHHHHHHHcCCCeEEEEecccccCCCC------CeeeccchHHHHHHHHHHHHcCCEEEecCCcceeeeecCCCCc
Confidence 3567789999999999999999999999985 89999998888899999999999888753 234789
Q ss_pred ccccccCCCCChhhHHHHHHHHHHHHHHhcCcc---ceEEEccCcceeee
Q 006261 265 AWAGEYGGWKLEKTIDYFMDFTRLVVDSVSDIV---DYWVTFNEPHVFCM 311 (653)
Q Consensus 265 ~wL~~~GGW~n~e~vd~Fa~YA~~vf~~fGDrV---k~WiT~NEP~v~~~ 311 (653)
.||....|-.-+..-..|.+.++.-+++...++ ++..+=.=|-+.+.
T Consensus 133 ~WL~~~~~i~~Rs~d~~fl~~v~~~~~~l~~~l~~~~l~~~~GGPIImvQ 182 (840)
T PLN03059 133 VWLKYVPGIEFRTDNGPFKAAMQKFTEKIVDMMKSEKLFEPQGGPIILSQ 182 (840)
T ss_pred hhhhcCCCcccccCCHHHHHHHHHHHHHHHHHHhhcceeecCCCcEEEEE
Confidence 998754454434444555555555555555555 45555555555443
No 33
>COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism]
Probab=95.27 E-value=0.087 Score=59.24 Aligned_cols=289 Identities=19% Similarity=0.199 Sum_probs=165.6
Q ss_pred hcccccccccCCCccccccCCCCh-----HHHHHHHHhcCCCeEEecccc-ccccCCCCCCCCCCcCChHH-HHHHHHHH
Q 006261 172 VHHKVTAWHNVPHPEERLRFWSDP-----DIELKLAKDTGVSVFRLGIDW-SRIMPAEPVNGLKETVNFAA-LERYKWII 244 (653)
Q Consensus 172 ~~~~~~~~~n~~~~~~a~~~y~~~-----~eDI~LmkelGv~~yRfSIsW-sRI~P~~~~~G~~G~vN~~G-Ld~Y~~LI 244 (653)
|.-+..+|+.-.+ ...|.+| +.|++.++.+|++..|.+|-= .. .-+. .|..|.+. +.+-..++
T Consensus 4 F~Lg~n~wprIan----ikmw~~~~~~ei~~dle~a~~vg~k~lR~fiLDgEd-c~d~-----~G~~na~s~~~y~~~fl 73 (587)
T COG3934 4 FALGLNRWPRIAN----IKMWPAIGNREIKADLEPAGFVGVKDLRLFILDGED-CRDK-----EGYRNAGSNVWYAAWFL 73 (587)
T ss_pred EEeccccchhhhh----hhHHHHhhhhhhhcccccccCccceeEEEEEecCcc-hhhh-----hceecccccHHHHHHHh
Confidence 5556666664211 1334443 478999999999999998422 21 1111 35667666 88899999
Q ss_pred HHHHHcCCeEEEEec----cCCCCccccc-cC------CCCChhhHHHHHHHHHHHHHHhcCc--cceEEEccCcceeee
Q 006261 245 NRVRSYGMKVMLTLF----HHSLPAWAGE-YG------GWKLEKTIDYFMDFTRLVVDSVSDI--VDYWVTFNEPHVFCM 311 (653)
Q Consensus 245 d~L~~~GIePiVTL~----HwDLP~wL~~-~G------GW~n~e~vd~Fa~YA~~vf~~fGDr--Vk~WiT~NEP~v~~~ 311 (653)
+.+...+|+.++||. |+.-=.|--. .| --..+.+..-|.+|.+.+++.|+-. +--|+-=|||.+=+
T Consensus 74 a~a~~l~lkvlitlivg~~hmgg~Nw~Ipwag~~~pdn~iyD~k~~~~~kkyvedlVk~yk~~ptI~gw~l~Ne~lv~~- 152 (587)
T COG3934 74 APAGYLDLKVLITLIVGLKHMGGTNWRIPWAGEQSPDNVIYDPKFRGPGKKYVEDLVKPYKLDPTIAGWALRNEPLVEA- 152 (587)
T ss_pred hhcccCcceEEEEEeecccccCcceeEeecCCCCCccccccchhhcccHHHHHHHHhhhhccChHHHHHHhcCCccccc-
Confidence 999999999999987 4332222211 01 1224666778999999999988876 44588888865411
Q ss_pred ccccCCCCCCCCCchhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeecccccCCCcccHHHHHHH
Q 006261 312 LTYCAGTWPGGNPDMLEVATSALPTGVFNQAMHWMAIAHSKAYDYIHAKSTSTKSKVGVAHHVSFMRPYGLFDVTAVTLA 391 (653)
Q Consensus 312 ~GY~~G~~PPG~~~~~~~~~~~~~~~~~~~a~h~LLlAHa~Ay~~ir~~~~~~~g~IGi~~~~~~~~P~~~~D~~aa~~~ 391 (653)
|.. ..+++.=-..-|.+|+...+. -.|.+ .++..|+..
T Consensus 153 ---------p~s-------------------~N~f~~w~~emy~yiK~ldd~--hlvsv---GD~~sp~~~--------- 190 (587)
T COG3934 153 ---------PIS-------------------VNNFWDWSGEMYAYIKWLDDG--HLVSV---GDPASPWPQ--------- 190 (587)
T ss_pred ---------cCC-------------------hhHHHHHHHHHHHHhhccCCC--Ceeec---CCcCCcccc---------
Confidence 110 012233335667788887763 23322 222222110
Q ss_pred hhccCCccccccCCCcceeEeeccCCceeeCCCCcccCCCCCcCCCCccCchHHHHHHHHHHHHhCCCCCCEEEeecCCC
Q 006261 392 NTLTTFPYVDSISDRLDFIGINYYGQEVVSGPGLKLVETDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVS 471 (653)
Q Consensus 392 n~l~~~p~~d~I~~s~DFiGINYYt~~~V~~~g~~~~~~~~~s~~Gw~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~a 471 (653)
.-|+ .++...||-+.+-|. ++...+ ++..+ .+|-.. .|. +-..-+ -+|+++-|.|++
T Consensus 191 ----~~py--N~r~~vDya~~hLY~-hyd~sl---------~~r~s-~~yg~~---~l~-i~~~~g--~~pV~leefGfs 247 (587)
T COG3934 191 ----YAPY--NARFYVDYAANHLYR-HYDTSL---------VSRVS-TVYGKP---YLD-IPTIMG--WQPVNLEEFGFS 247 (587)
T ss_pred ----cCCc--ccceeeccccchhhh-hccCCh---------hheee-eeecch---hhc-cchhcc--cceeeccccCCc
Confidence 1112 345678888888885 221111 11111 111000 111 111112 289999999999
Q ss_pred CCCCccc--HHHHHHHHHHHHHHHHcCCCeeEEEEeecccccCCcCC-------CCCccceEEEcCCCCccccccchHHH
Q 006261 472 DETDLIR--RPYVIEHLLAVYAAMITGVPVIGYLFWTISDNWEWADG-------YGPKFGLVAVDRANNLARIPRPSYHL 542 (653)
Q Consensus 472 d~~D~~R--i~YL~~hL~~v~~Ai~dGV~V~GY~~WSLlDNfEW~~G-------Y~~RFGL~~VD~~~~l~R~PK~Sa~w 542 (653)
+..-..| +.+|-.-| |..-|. .|-++|.|.|--+=.++ ....||++.-|- .+|-++.-
T Consensus 248 ta~g~e~s~ayfiw~~l-----al~~gg--dGaLiwclsdf~~gsdd~ey~w~p~el~fgiIradg------pek~~a~~ 314 (587)
T COG3934 248 TAFGQENSPAYFIWIRL-----ALDTGG--DGALIWCLSDFHLGSDDSEYTWGPMELEFGIIRADG------PEKIDAMT 314 (587)
T ss_pred ccccccccchhhhhhhh-----HHhhcC--CceEEEEecCCccCCCCCCCccccccceeeeecCCC------chhhhHHH
Confidence 7533333 22222222 444443 57899999998744333 234789987664 67888888
Q ss_pred HHHHHHc
Q 006261 543 FTKVVTT 549 (653)
Q Consensus 543 Y~~ii~~ 549 (653)
|.++-.+
T Consensus 315 ~~~fsn~ 321 (587)
T COG3934 315 LHIFSNN 321 (587)
T ss_pred HHHhccc
Confidence 8888665
No 34
>PLN02803 beta-amylase
Probab=94.79 E-value=0.081 Score=60.19 Aligned_cols=104 Identities=21% Similarity=0.384 Sum_probs=78.7
Q ss_pred hHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccC------------C
Q 006261 195 PDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHH------------S 262 (653)
Q Consensus 195 ~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~Hw------------D 262 (653)
.+..++.+|.+||+.+-..+=|--+++++| +.+|+.| |++|++.+++.|++..+.|--+ -
T Consensus 109 l~~~L~~LK~~GVdGVmvDVWWGiVE~~~p-----~~YdWsg---Y~~l~~mvr~~GLKlq~vmSFHqCGGNVGD~~~Ip 180 (548)
T PLN02803 109 MNASLMALRSAGVEGVMVDAWWGLVEKDGP-----MKYNWEG---YAELVQMVQKHGLKLQVVMSFHQCGGNVGDSCSIP 180 (548)
T ss_pred HHHHHHHHHHcCCCEEEEEeeeeeeccCCC-----CcCCcHH---HHHHHHHHHHcCCeEEEEEEecccCCCCCCccccc
Confidence 567999999999999999999999999864 7899876 9999999999999988777433 4
Q ss_pred CCccccc------------cCCCCChh----------------hHHHHHHHHHHHHHHhcCccceEEEccCcce
Q 006261 263 LPAWAGE------------YGGWKLEK----------------TIDYFMDFTRLVVDSVSDIVDYWVTFNEPHV 308 (653)
Q Consensus 263 LP~wL~~------------~GGW~n~e----------------~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v 308 (653)
||+|+.+ .-|-.|.+ -++-+.+|-+-.-++|.+... -||.|..+
T Consensus 181 LP~WV~e~~~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~Dfm~SFr~~F~~~l~--~~I~eI~V 252 (548)
T PLN02803 181 LPPWVLEEMSKNPDLVYTDRSGRRNPEYISLGCDSLPVLRGRTPIQVYSDYMRSFRERFKDYLG--GVIAEIQV 252 (548)
T ss_pred CCHHHHHhhhcCCCceEecCCCCcccceeccccccchhccCCCHHHHHHHHHHHHHHHHHHHhc--CceEEEEe
Confidence 9999632 22333332 335677777777777777654 47777554
No 35
>PLN02161 beta-amylase
Probab=94.39 E-value=0.11 Score=58.92 Aligned_cols=110 Identities=19% Similarity=0.361 Sum_probs=82.7
Q ss_pred ccCCCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccC-------
Q 006261 189 LRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHH------- 261 (653)
Q Consensus 189 ~~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~Hw------- 261 (653)
...+.-.+..++.+|.+||+.+-..+=|--+++++| +.+|++| |++|++.+++.|++..+.|--+
T Consensus 113 v~~~~al~~~L~~LK~~GVdGVmvDVWWGiVE~~~p-----~~YdWsg---Y~~l~~mvr~~GLKlq~vmSFHqCGGNvG 184 (531)
T PLN02161 113 IKRLKALTVSLKALKLAGVHGIAVEVWWGIVERFSP-----LEFKWSL---YEELFRLISEAGLKLHVALCFHSNMHLFG 184 (531)
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEEeeeeeeecCCC-----CcCCcHH---HHHHHHHHHHcCCeEEEEEEecccCCCCC
Confidence 355666788999999999999999999999999864 7899866 9999999999999988777433
Q ss_pred -----CCCccccc------------cCCCCChh----------------hHHHHHHHHHHHHHHhcCccceEEEccCcce
Q 006261 262 -----SLPAWAGE------------YGGWKLEK----------------TIDYFMDFTRLVVDSVSDIVDYWVTFNEPHV 308 (653)
Q Consensus 262 -----DLP~wL~~------------~GGW~n~e----------------~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v 308 (653)
-||+|+.+ .-|-.|++ -++-+.+|-+-.-++|.+... -||.|..+
T Consensus 185 d~~~IpLP~WV~~~g~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~Dfm~SFr~~F~~~~~--~~I~eI~V 262 (531)
T PLN02161 185 GKGGISLPLWIREIGDVNKDIYYRDKNGFSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLSFSTKFEPYIG--NVIEEISI 262 (531)
T ss_pred CccCccCCHHHHhhhccCCCceEEcCCCCcccceeeeecccchhcCCCCHHHHHHHHHHHHHHHHHHHhc--CceEEEEe
Confidence 38999631 23333332 336777777777777777654 36666554
No 36
>PLN00197 beta-amylase; Provisional
Probab=94.26 E-value=0.17 Score=57.89 Aligned_cols=105 Identities=23% Similarity=0.404 Sum_probs=79.9
Q ss_pred ChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccC------------
Q 006261 194 DPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHH------------ 261 (653)
Q Consensus 194 ~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~Hw------------ 261 (653)
-.+..++.+|.+||+.+-..+=|--+++++| +.+|++| |++|++-+++.|++..+.|--+
T Consensus 128 ~l~~~L~~LK~~GVdGVmvDvWWGiVE~~~p-----~~YdWsg---Y~~L~~mvr~~GLKlq~VmSFHqCGGNVGD~~~I 199 (573)
T PLN00197 128 AMKASLQALKSAGVEGIMMDVWWGLVERESP-----GVYNWGG---YNELLEMAKRHGLKVQAVMSFHQCGGNVGDSCTI 199 (573)
T ss_pred HHHHHHHHHHHcCCCEEEEeeeeeeeccCCC-----CcCCcHH---HHHHHHHHHHcCCeEEEEEEecccCCCCCCcccc
Confidence 3678999999999999999999999999874 7899876 9999999999999988777433
Q ss_pred CCCccccc------------cCCCCChh----------------hHHHHHHHHHHHHHHhcCccceEEEccCcce
Q 006261 262 SLPAWAGE------------YGGWKLEK----------------TIDYFMDFTRLVVDSVSDIVDYWVTFNEPHV 308 (653)
Q Consensus 262 DLP~wL~~------------~GGW~n~e----------------~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v 308 (653)
-||+|+.+ ..|-.|.+ -++-+.+|-+-.-++|.+..+ -||.|..+
T Consensus 200 pLP~WV~~~g~~dpDifftDr~G~rn~EyLSlg~D~~pvl~GRTpiq~Y~DFM~SFr~~F~~~l~--~~I~eI~V 272 (573)
T PLN00197 200 PLPKWVVEEVDKDPDLAYTDQWGRRNYEYVSLGCDTLPVLKGRTPVQCYADFMRAFRDNFKHLLG--DTIVEIQV 272 (573)
T ss_pred cCCHHHHHhhccCCCceeecCCCCcccceeccccccccccCCCCHHHHHHHHHHHHHHHHHHHhc--CceeEEEe
Confidence 49999632 22333322 256777887777777777654 36766554
No 37
>PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 14 GH14 from CAZY comprises enzymes with only one known activity; beta-amylase (3.2.1.2 from EC). A Glu residue has been proposed as a catalytic residue, but it is not known if it is the nucleophile or the proton donor. Beta-amylase [, ] is an enzyme that hydrolyses 1,4-alpha-glucosidic linkages in starch-type polysaccharide substrates so as to remove successive maltose units from the non-reducing ends of the chains. Beta-amylase is present in certain bacteria as well as in plants. Three highly conserved sequence regions are found in all known beta-amylases. The first of these regions is located in the N-terminal section of the enzymes and contains an aspartate which is known [] to be involved in the catalytic mechanism. The second, located in a more central location, is centred around a glutamate which is also involved [] in the catalytic mechanism. The 3D structure of a complex of soybean beta-amylase with an inhibitor (alpha-cyclodextrin) has been determined to 3.0A resolution by X-ray diffraction []. The enzyme folds into large and small domains: the large domain has a (beta alpha)8 super-secondary structural core, while the smaller is formed from two long loops extending from the beta-3 and beta-4 strands of the (beta alpha)8 fold []. The interface of the two domains, together with shorter loops from the (beta alpha)8 core, form a deep cleft, in which the inhibitor binds []. Two maltose molecules also bind in the cleft, one sharing a binding site with alpha-cyclodextrin, and the other sitting more deeply in the cleft [].; GO: 0016161 beta-amylase activity, 0000272 polysaccharide catabolic process; PDB: 1FA2_A 2DQX_A 1WDP_A 1UKP_C 1BYC_A 1BYA_A 1Q6C_A 1V3I_A 1BTC_A 1BYB_A ....
Probab=94.01 E-value=0.069 Score=59.18 Aligned_cols=103 Identities=25% Similarity=0.481 Sum_probs=77.4
Q ss_pred ChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEe-cc-----------C
Q 006261 194 DPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTL-FH-----------H 261 (653)
Q Consensus 194 ~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL-~H-----------w 261 (653)
-.+..++.||.+||+.+-..+=|--+++.+| +++|+++ |+++.+.+++.|++..+.| +| .
T Consensus 17 ~~~~~L~~LK~~GV~GVmvdvWWGiVE~~~p-----~~ydWs~---Y~~l~~~vr~~GLk~~~vmsfH~cGgNvgD~~~I 88 (402)
T PF01373_consen 17 ALEAQLRALKSAGVDGVMVDVWWGIVEGEGP-----QQYDWSG---YRELFEMVRDAGLKLQVVMSFHQCGGNVGDDCNI 88 (402)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEEHHHHTGSST-----TB---HH---HHHHHHHHHHTT-EEEEEEE-S-BSSSTTSSSEB
T ss_pred HHHHHHHHHHHcCCcEEEEEeEeeeeccCCC-----CccCcHH---HHHHHHHHHHcCCeEEEEEeeecCCCCCCCccCC
Confidence 5678999999999999999999999999863 7899866 9999999999999988876 34 3
Q ss_pred CCCcccc-----------c-cC--------CCCChhhHHHHHHHHHHHHHHhcCccceEEEccCcc
Q 006261 262 SLPAWAG-----------E-YG--------GWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPH 307 (653)
Q Consensus 262 DLP~wL~-----------~-~G--------GW~n~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~ 307 (653)
-||.|+. + .| -|+...+++.+.+|-+-..++|.+.. -||-|..
T Consensus 89 pLP~Wv~~~~~~~di~ytd~~G~rn~E~lSp~~~grt~~~Y~dfm~sF~~~f~~~~---~~I~~I~ 151 (402)
T PF01373_consen 89 PLPSWVWEIGKKDDIFYTDRSGNRNKEYLSPVLDGRTLQCYSDFMRSFRDNFSDYL---STITEIQ 151 (402)
T ss_dssp -S-HHHHHHHHHSGGEEE-TTS-EEEEEE-CTBTTBCHHHHHHHHHHHHHHCHHHH---TGEEEEE
T ss_pred cCCHHHHhccccCCcEEECCCCCcCcceeecccCCchHHHHHHHHHHHHHHHHHHH---hhheEEE
Confidence 6899962 1 23 25665669999999999999998765 4555544
No 38
>PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D.
Probab=93.14 E-value=0.64 Score=49.46 Aligned_cols=108 Identities=18% Similarity=0.252 Sum_probs=63.0
Q ss_pred hHHHHHHHHhcCCCeEEecc--ccccc-----cCCCCCCCC------CCcCChHHHHHHHHHHHHHHHcCCeEEEEeccC
Q 006261 195 PDIELKLAKDTGVSVFRLGI--DWSRI-----MPAEPVNGL------KETVNFAALERYKWIINRVRSYGMKVMLTLFHH 261 (653)
Q Consensus 195 ~~eDI~LmkelGv~~yRfSI--sWsRI-----~P~~~~~G~------~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~Hw 261 (653)
.++=++..|+-|+|..|+.+ .|... .|..+..+. -..+|++=.++.+++|+.|.++||+|.+-++|
T Consensus 32 ~~~yL~~r~~qgFN~iq~~~l~~~~~~~~~n~~~~~~~~~~~~~~~d~~~~N~~YF~~~d~~i~~a~~~Gi~~~lv~~w- 110 (289)
T PF13204_consen 32 WEQYLDTRKEQGFNVIQMNVLPQWDGYNTPNRYGFAPFPDEDPGQFDFTRPNPAYFDHLDRRIEKANELGIEAALVPFW- 110 (289)
T ss_dssp HHHHHHHHHHTT--EEEEES-SSSS-B----TTS-BS-SSTT------TT----HHHHHHHHHHHHHHTT-EEEEESS--
T ss_pred HHHHHHHHHHCCCCEEEEEeCCCcccccccccCCCcCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEEE-
Confidence 34557888999999999998 33332 222222111 12489999999999999999999999877776
Q ss_pred CCCccccccCCCC---ChhhHHHHHHHHHHHHHHhcCc-cceEEEccCc
Q 006261 262 SLPAWAGEYGGWK---LEKTIDYFMDFTRLVVDSVSDI-VDYWVTFNEP 306 (653)
Q Consensus 262 DLP~wL~~~GGW~---n~e~vd~Fa~YA~~vf~~fGDr-Vk~WiT~NEP 306 (653)
+.|- ..|.|- +.-..+.-.+|.+.|++||+.. =-.|+.=||=
T Consensus 111 g~~~---~~~~Wg~~~~~m~~e~~~~Y~~yv~~Ry~~~~NviW~l~gd~ 156 (289)
T PF13204_consen 111 GCPY---VPGTWGFGPNIMPPENAERYGRYVVARYGAYPNVIWILGGDY 156 (289)
T ss_dssp HHHH---H-------TTSS-HHHHHHHHHHHHHHHTT-SSEEEEEESSS
T ss_pred CCcc---ccccccccccCCCHHHHHHHHHHHHHHHhcCCCCEEEecCcc
Confidence 1121 113332 2233567788999999999998 3667776664
No 39
>COG3664 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=93.01 E-value=1.8 Score=48.30 Aligned_cols=262 Identities=19% Similarity=0.219 Sum_probs=144.6
Q ss_pred HHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccc-cCC-CCC-hhh
Q 006261 202 AKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGE-YGG-WKL-EKT 278 (653)
Q Consensus 202 mkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~-~GG-W~n-~e~ 278 (653)
-+|+|++..|+---|.-++-.. -++ ..+|++++|.+.+.|+.=+.+-+||+.+.-... +.+ =.. ...
T Consensus 14 ~~Ei~v~yi~~~~v~h~~~q~~-------~~~---~t~~d~i~d~~~~~~~~~ie~~l~~~~l~~~~~~wq~n~~~~~~~ 83 (428)
T COG3664 14 DDEIQVNYIRRHGVWHVNAQKL-------FYP---FTYIDEIIDTLLDLGLDLIELFLIWNNLNTKEHQWQLNVDDPKSV 83 (428)
T ss_pred hhhhceeeehhcceeeeeeccc-------cCC---hHHHHHHHHHHHHhccHHHHHhhcccchhhhhhhcccccCCcHhH
Confidence 4688999999888888332221 233 367999999999999444446678888765433 111 112 347
Q ss_pred HHHHHHHHHHHHHHhcCc---cceEEEccCcceeeeccccCCCCCCCCCchhhhhhcCCCchhHHHHHHHHHHHHHHHHH
Q 006261 279 IDYFMDFTRLVVDSVSDI---VDYWVTFNEPHVFCMLTYCAGTWPGGNPDMLEVATSALPTGVFNQAMHWMAIAHSKAYD 355 (653)
Q Consensus 279 vd~Fa~YA~~vf~~fGDr---Vk~WiT~NEP~v~~~~GY~~G~~PPG~~~~~~~~~~~~~~~~~~~a~h~LLlAHa~Ay~ 355 (653)
.+.+..|...|+.+||-+ +-.....||||..+- . .+.+ . +.+..||
T Consensus 84 ~dl~~~fl~h~~~~vg~e~v~kw~f~~~~~pn~~ad--------------~---------~eyf-k--~y~~~a~----- 132 (428)
T COG3664 84 FDLIAAFLKHVIRRVGVEFVRKWPFYSPNEPNLLAD--------------K---------QEYF-K--LYDATAR----- 132 (428)
T ss_pred HHHHHHHHHHHHHHhChhheeecceeecCCCCcccc--------------h---------HHHH-H--HHHhhhh-----
Confidence 889999999999999954 233467788886421 1 0111 1 2233333
Q ss_pred HHHhcCCCCCCeEEEEeecccccCCCcccHHHHHHHhhccCCccccccCCCcceeEeeccCCceeeC--CCCcccCCCCC
Q 006261 356 YIHAKSTSTKSKVGVAHHVSFMRPYGLFDVTAVTLANTLTTFPYVDSISDRLDFIGINYYGQEVVSG--PGLKLVETDEY 433 (653)
Q Consensus 356 ~ir~~~~~~~g~IGi~~~~~~~~P~~~~D~~aa~~~n~l~~~p~~d~I~~s~DFiGINYYt~~~V~~--~g~~~~~~~~~ 433 (653)
+..+ .-++|- +|..+ + ..++.+ .....||+-.+-|+..-+.. ++.. ..
T Consensus 133 ---~~~p--~i~vg~----~w~~e----------~-----l~~~~k-~~d~idfvt~~a~~~~av~~~~~~~~-----~~ 182 (428)
T COG3664 133 ---QRAP--SIQVGG----SWNTE----------R-----LHEFLK-KADEIDFVTELANSVDAVDFSTPGAE-----EV 182 (428)
T ss_pred ---ccCc--ceeecc----ccCcH----------H-----Hhhhhh-ccCcccceeecccccccccccCCCch-----hh
Confidence 1111 122321 12210 0 011222 35677899888887643321 1111 11
Q ss_pred cCCCC-ccCchHHHHHHHHHHHHhCCCCCCEEEeecCCCCC-----CC-cccHHHHHHHHHHHHHHHHcCCCeeEEEEee
Q 006261 434 SESGR-GVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDE-----TD-LIRRPYVIEHLLAVYAAMITGVPVIGYLFWT 506 (653)
Q Consensus 434 s~~Gw-~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~ad~-----~D-~~Ri~YL~~hL~~v~~Ai~dGV~V~GY~~WS 506 (653)
.-++- .+.++ -+-++..-++++- ++|.++||=-..+. +| -.|..||.+-| ++.|.+|.+..+|.
T Consensus 183 ~l~~~~~~l~~--~r~~~d~i~~~~~-~~pl~~~~wntlt~~~~~~n~sy~raa~i~~~L------r~~g~~v~a~~yW~ 253 (428)
T COG3664 183 KLSELKRTLED--LRGLKDLIQHHSL-GLPLLLTNWNTLTGPREPTNGSYVRAAYIMRLL------REAGSPVDAFGYWT 253 (428)
T ss_pred hhhhhhhhhhH--HHHHHHHHHhccC-CCcceeecccccCCCccccCceeehHHHHHHHH------HhcCChhhhhhhhh
Confidence 11111 11221 1222222344543 68999999766642 22 34555555433 46799999999999
Q ss_pred cccccCCcC----CCCCccceEEEcCCCCccccccchHHHHHHH
Q 006261 507 ISDNWEWAD----GYGPKFGLVAVDRANNLARIPRPSYHLFTKV 546 (653)
Q Consensus 507 LlDNfEW~~----GY~~RFGL~~VD~~~~l~R~PK~Sa~wY~~i 546 (653)
-.|-+|=.. +|-.-|||++ ++. .+|--=-++..|.++
T Consensus 254 ~sdl~e~~g~~~~~~~~gfel~~-~~~--~rrpa~~~~l~~n~L 294 (428)
T COG3664 254 NSDLHEEHGPPEAPFVGGFELFA-PYG--GRRPAWMAALFFNRL 294 (428)
T ss_pred cccccccCCCcccccccceeeec-ccc--cchhHHHHHHHHHHH
Confidence 999986442 3566788874 332 222222445555555
No 40
>PLN02705 beta-amylase
Probab=92.47 E-value=0.4 Score=55.49 Aligned_cols=96 Identities=23% Similarity=0.415 Sum_probs=72.8
Q ss_pred CChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccC-----------
Q 006261 193 SDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHH----------- 261 (653)
Q Consensus 193 ~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~Hw----------- 261 (653)
.-.+..++.||.+||+.+-..+=|-.|+.++| +.+|+.| |++|++.+++.|++..+.|--+
T Consensus 268 ~al~a~L~aLK~aGVdGVmvDVWWGiVE~~~P-----~~YdWsg---Y~~L~~mvr~~GLKlqvVmSFHqCGGNVGD~~~ 339 (681)
T PLN02705 268 EGVRQELSHMKSLNVDGVVVDCWWGIVEGWNP-----QKYVWSG---YRELFNIIREFKLKLQVVMAFHEYGGNASGNVM 339 (681)
T ss_pred HHHHHHHHHHHHcCCCEEEEeeeeeEeecCCC-----CcCCcHH---HHHHHHHHHHcCCeEEEEEEeeccCCCCCCccc
Confidence 34678999999999999999999999999864 7899866 9999999999999987776433
Q ss_pred -CCCccccc------------cCCCCChh----------------hHHHHHHHHHHHHHHhcCc
Q 006261 262 -SLPAWAGE------------YGGWKLEK----------------TIDYFMDFTRLVVDSVSDI 296 (653)
Q Consensus 262 -DLP~wL~~------------~GGW~n~e----------------~vd~Fa~YA~~vf~~fGDr 296 (653)
-||+|+.+ .-|-.|.+ -++-+.+|.+-.-++|.+.
T Consensus 340 IPLP~WV~e~g~~nPDifftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~DFM~SFr~~F~~f 403 (681)
T PLN02705 340 ISLPQWVLEIGKDNQDIFFTDREGRRNTECLSWSIDKERVLKGRTGIEVYFDFMRSFRSEFDDL 403 (681)
T ss_pred ccCCHHHHHhcccCCCceeecCCCCcccceeeeecCcccccCCCCHHHHHHHHHHHHHHHHHHh
Confidence 49999632 22333332 3366777777666777654
No 41
>PLN02801 beta-amylase
Probab=92.29 E-value=0.29 Score=55.61 Aligned_cols=104 Identities=18% Similarity=0.456 Sum_probs=77.6
Q ss_pred hHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccC------------C
Q 006261 195 PDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHH------------S 262 (653)
Q Consensus 195 ~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~Hw------------D 262 (653)
.+..++.+|.+||+.+-..+=|--|+.++| +.+|++| |++|++.+++.|++..+.|--+ -
T Consensus 39 l~~~L~~LK~~GVdGVmvDVWWGiVE~~~P-----~~YdWsg---Y~~l~~mvr~~GLKlq~vmSFHqCGGNVGD~~~Ip 110 (517)
T PLN02801 39 LEKQLKRLKEAGVDGVMVDVWWGIVESKGP-----KQYDWSA---YRSLFELVQSFGLKIQAIMSFHQCGGNVGDAVNIP 110 (517)
T ss_pred HHHHHHHHHHcCCCEEEEeeeeeeeccCCC-----CccCcHH---HHHHHHHHHHcCCeEEEEEEecccCCCCCCccccc
Confidence 577999999999999999999999999864 7899876 9999999999999987766433 5
Q ss_pred CCccccc------------cCCCCC----------------hhhHHHHHHHHHHHHHHhcCccceEEEccCcc
Q 006261 263 LPAWAGE------------YGGWKL----------------EKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPH 307 (653)
Q Consensus 263 LP~wL~~------------~GGW~n----------------~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~ 307 (653)
||+|+.+ .-|-.| +.-++-+.+|-+-.-++|.+...- -||.|..
T Consensus 111 LP~WV~~~g~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~Dfm~SFr~~F~~~l~~-~~I~eI~ 182 (517)
T PLN02801 111 IPQWVRDVGDSDPDIFYTNRSGNRNKEYLSIGVDNLPLFHGRTAVEMYSDYMKSFRENMADFLEA-GVIIDIE 182 (517)
T ss_pred CCHHHHHhhccCCCceeecCCCCcCcceeeeccCcccccCCCCHHHHHHHHHHHHHHHHHHhccC-CeeEEEE
Confidence 8999632 223222 223578888888887888775321 2555544
No 42
>PLN02905 beta-amylase
Probab=92.11 E-value=0.25 Score=57.19 Aligned_cols=100 Identities=20% Similarity=0.390 Sum_probs=75.9
Q ss_pred ccCCCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccC-------
Q 006261 189 LRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHH------- 261 (653)
Q Consensus 189 ~~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~Hw------- 261 (653)
...+.-.+..++.||.+||+.+-..+=|--+++++| +.+|+.| |++|++.+++.|++..+.|--+
T Consensus 282 l~~~~al~a~L~aLK~aGVdGVmvDVWWGiVE~~gP-----~~YdWsg---Y~~L~~mvr~~GLKlqvVMSFHqCGGNVG 353 (702)
T PLN02905 282 LADPDGLLKQLRILKSINVDGVKVDCWWGIVEAHAP-----QEYNWNG---YKRLFQMVRELKLKLQVVMSFHECGGNVG 353 (702)
T ss_pred ccCHHHHHHHHHHHHHcCCCEEEEeeeeeeeecCCC-----CcCCcHH---HHHHHHHHHHcCCeEEEEEEecccCCCCC
Confidence 355666788999999999999999999999999874 7899866 9999999999999988777433
Q ss_pred -----CCCccccc------------cCCCCChh----------------hHHHHHHHHHHHHHHhcCc
Q 006261 262 -----SLPAWAGE------------YGGWKLEK----------------TIDYFMDFTRLVVDSVSDI 296 (653)
Q Consensus 262 -----DLP~wL~~------------~GGW~n~e----------------~vd~Fa~YA~~vf~~fGDr 296 (653)
-||+|+.+ .-|-.|.+ -++-+.+|-+-.-++|.+.
T Consensus 354 D~~~IPLP~WV~e~g~~nPDifftDrsG~rn~EyLSlg~D~~pvl~GRTplq~Y~DFM~SFr~~F~~f 421 (702)
T PLN02905 354 DDVCIPLPHWVAEIGRSNPDIFFTDREGRRNPECLSWGIDKERILRGRTALEVYFDYMRSFRVEFDEF 421 (702)
T ss_pred CcccccCCHHHHHhhhcCCCceEecCCCCccCceeeeecccccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 49999632 23333333 3466777777666677653
No 43
>PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 30 GH30 from CAZY comprises enzymes with only one known activity; glucosylceramidase (3.2.1.45 from EC). Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides []. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [, ].; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0007040 lysosome organization, 0005764 lysosome; PDB: 2VT0_B 1NOF_A 2Y24_A 2WCG_B 2J25_A 3GXM_D 1Y7V_B 2NT0_C 3GXF_C 3GXD_A ....
Probab=90.72 E-value=15 Score=42.37 Aligned_cols=113 Identities=19% Similarity=0.312 Sum_probs=63.5
Q ss_pred CCCcceeEeeccCCceeeCCCCcccCCCCCcCCCCccCchHHHHHHHHHHHHhCCCCCCEEEeecCCCCC-CC----ccc
Q 006261 404 SDRLDFIGINYYGQEVVSGPGLKLVETDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDE-TD----LIR 478 (653)
Q Consensus 404 ~~s~DFiGINYYt~~~V~~~g~~~~~~~~~s~~Gw~i~P~GL~~lL~~i~~rY~~~~~PI~ITENG~ad~-~D----~~R 478 (653)
....|-+|+|.|... ..+ ..|.+++++|+ ++.|+-||...+.. .| ...
T Consensus 300 ~~yv~GiA~HwY~g~---------------------~~~----~~l~~~h~~~P--~k~l~~TE~~~g~~~~~~~~~~g~ 352 (496)
T PF02055_consen 300 AKYVDGIAFHWYGGD---------------------PSP----QALDQVHNKFP--DKFLLFTEACCGSWNWDTSVDLGS 352 (496)
T ss_dssp HTTEEEEEEEETTCS----------------------HC----HHHHHHHHHST--TSEEEEEEEESS-STTS-SS-TTH
T ss_pred HhheeEEEEECCCCC---------------------chh----hHHHHHHHHCC--CcEEEeeccccCCCCccccccccc
Confidence 346799999999631 011 25677899998 68899999876642 12 111
Q ss_pred HHHHHHHHHHHHHHHHcCCCeeEEEEeecc-c---ccCCcCCCCCccceEEEcCCCCccccccchHHHHHHHHH
Q 006261 479 RPYVIEHLLAVYAAMITGVPVIGYLFWTIS-D---NWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVT 548 (653)
Q Consensus 479 i~YL~~hL~~v~~Ai~dGV~V~GY~~WSLl-D---NfEW~~GY~~RFGL~~VD~~~~l~R~PK~Sa~wY~~ii~ 548 (653)
..--..+...+...+..| +.||+.|.|+ | ..-|..++... .+-||.++ .+-+..|.++.+.++.+
T Consensus 353 w~~~~~y~~~ii~~lnn~--~~gw~~WNl~LD~~GGP~~~~n~~d~--~iivd~~~-~~~~~~p~yY~~gHfSK 421 (496)
T PF02055_consen 353 WDRAERYAHDIIGDLNNW--VSGWIDWNLALDENGGPNWVGNFCDA--PIIVDSDT-GEFYKQPEYYAMGHFSK 421 (496)
T ss_dssp HHHHHHHHHHHHHHHHTT--EEEEEEEESEBETTS---TT---B----SEEEEGGG-TEEEE-HHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhh--ceeeeeeeeecCCCCCCcccCCCCCc--eeEEEcCC-CeEEEcHHHHHHHHHhc
Confidence 111123444455667777 5899999985 3 23354444333 34467643 34455667777766653
No 44
>COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]
Probab=88.16 E-value=2.4 Score=51.34 Aligned_cols=123 Identities=18% Similarity=0.117 Sum_probs=78.3
Q ss_pred hhhhhhhcccccccCCCCCCCCchhhhcccccccccCCCccccccCCCC-hHHHHHHHHhcCCCeEEeccccccccCCCC
Q 006261 146 GFQKYIEVDEGEEVSGENEVPTENEEVHHKVTAWHNVPHPEERLRFWSD-PDIELKLAKDTGVSVFRLGIDWSRIMPAEP 224 (653)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~a~~~y~~-~~eDI~LmkelGv~~yRfSIsWsRI~P~~~ 224 (653)
||..+.=..++=.+ |-+| .|++-+++.+.. |......+.. ++.|++|||++|+|++|.| -.|..
T Consensus 282 GfR~iei~~~~~~i---NGkp----vf~kGvnrHe~~--~~~G~~~~~~~~~~dl~lmk~~n~N~vRts-----HyP~~- 346 (808)
T COG3250 282 GFRTVEIKDGLLLI---NGKP----VFIRGVNRHEDD--PILGRVTDEDAMERDLKLMKEANMNSVRTS-----HYPNS- 346 (808)
T ss_pred ccEEEEEECCeEEE---CCeE----EEEeeeecccCC--CccccccCHHHHHHHHHHHHHcCCCEEEec-----CCCCC-
Confidence 55554444333333 3355 788887775543 3333344444 9999999999999999999 66653
Q ss_pred CCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccccCCCCChhhHHHHHHHHHHHHHHhcCc--cceEEE
Q 006261 225 VNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKLEKTIDYFMDFTRLVVDSVSDI--VDYWVT 302 (653)
Q Consensus 225 ~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~~GGW~n~e~vd~Fa~YA~~vf~~fGDr--Vk~WiT 302 (653)
.++.+-|=+.||=+|=-..+.. .|+..+++..+...+=++.++++-.+. |-.|+.
T Consensus 347 ----------------~~~ydLcDelGllV~~Ea~~~~-------~~~~~~~~~~k~~~~~i~~mver~knHPSIiiWs~ 403 (808)
T COG3250 347 ----------------EEFYDLCDELGLLVIDEAMIET-------HGMPDDPEWRKEVSEEVRRMVERDRNHPSIIIWSL 403 (808)
T ss_pred ----------------HHHHHHHHHhCcEEEEecchhh-------cCCCCCcchhHHHHHHHHHHHHhccCCCcEEEEec
Confidence 1355667778988876554322 133355666667777777888877654 556666
Q ss_pred ccCc
Q 006261 303 FNEP 306 (653)
Q Consensus 303 ~NEP 306 (653)
-||.
T Consensus 404 gNE~ 407 (808)
T COG3250 404 GNES 407 (808)
T ss_pred cccc
Confidence 6664
No 45
>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 17 GH17 from CAZY comprises enzymes with several known activities; endo-1,3-beta-glucosidase (3.2.1.39 from EC); lichenase (3.2.1.73 from EC); exo-1,3-glucanase (3.2.1.58 from EC). Currently these enzymes have only been found in plants and in fungi. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1AQ0_B 1GHR_A 1GHS_B 2CYG_A 3UR8_A 3UR7_B 3EM5_C 3F55_D.
Probab=84.82 E-value=1.4 Score=47.59 Aligned_cols=87 Identities=18% Similarity=0.309 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhCCCCCCEEEeecCCCCCCCcc-cHHHHHHHHHHHHHHHHcCCCe-----eEEEEeecccccCCcCC--C
Q 006261 446 FRVLHQFHERYKHLNLPFIITENGVSDETDLI-RRPYVIEHLLAVYAAMITGVPV-----IGYLFWTISDNWEWADG--Y 517 (653)
Q Consensus 446 ~~lL~~i~~rY~~~~~PI~ITENG~ad~~D~~-Ri~YL~~hL~~v~~Ai~dGV~V-----~GY~~WSLlDNfEW~~G--Y 517 (653)
.+.+....++-+..++||+|||+||++..+.. -..=-+.+...+.+.+..|.+. .-+++.+++|- .|-.| .
T Consensus 213 ~da~~~a~~~~g~~~~~vvv~ETGWPs~G~~~a~~~nA~~~~~nl~~~~~~gt~~~~~~~~~~y~F~~FdE-~~K~~~~~ 291 (310)
T PF00332_consen 213 VDAVYAAMEKLGFPNVPVVVGETGWPSAGDPGATPENAQAYNQNLIKHVLKGTPLRPGNGIDVYIFEAFDE-NWKPGPEV 291 (310)
T ss_dssp HHHHHHHHHTTT-TT--EEEEEE---SSSSTTCSHHHHHHHHHHHHHHCCGBBSSSBSS---EEES-SB---TTSSSSGG
T ss_pred HHHHHHHHHHhCCCCceeEEeccccccCCCCCCCcchhHHHHHHHHHHHhCCCcccCCCCCeEEEEEEecC-cCCCCCcc
Confidence 34444455555544789999999999865511 1122233444444444466554 34777888875 46555 5
Q ss_pred CCccceEEEcCCCCccccccch
Q 006261 518 GPKFGLVAVDRANNLARIPRPS 539 (653)
Q Consensus 518 ~~RFGL~~VD~~~~l~R~PK~S 539 (653)
+..|||++-| |+||-+
T Consensus 292 E~~wGlf~~d------~~~ky~ 307 (310)
T PF00332_consen 292 ERHWGLFYPD------GTPKYD 307 (310)
T ss_dssp GGG--SB-TT------SSBSS-
T ss_pred cceeeeECCC------CCeecC
Confidence 7899999765 456654
No 46
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=80.30 E-value=16 Score=35.93 Aligned_cols=105 Identities=15% Similarity=0.203 Sum_probs=59.3
Q ss_pred ChHHHHHHHHhcCCCeEEeccccccccCCC--CCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccccC
Q 006261 194 DPDIELKLAKDTGVSVFRLGIDWSRIMPAE--PVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYG 271 (653)
Q Consensus 194 ~~~eDI~LmkelGv~~yRfSIsWsRI~P~~--~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~~G 271 (653)
+|+++++.||++|+++.=+- |+..--.. |.....+.+.....+-...++++.-++||+.+|.|+.. |.|.+.
T Consensus 21 ~W~~~~~~m~~~GidtlIlq--~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~Gl~~~--~~~w~~-- 94 (166)
T PF14488_consen 21 QWREEFRAMKAIGIDTLILQ--WTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMKVFVGLYFD--PDYWDQ-- 94 (166)
T ss_pred HHHHHHHHHHHcCCcEEEEE--EeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCEEEEeCCCC--chhhhc--
Confidence 57899999999999998533 44432110 00000112233445667889999999999999999864 344432
Q ss_pred CCCChh-hHHHHHHHHHHHHHHhcCc--cceEEEccCc
Q 006261 272 GWKLEK-TIDYFMDFTRLVVDSVSDI--VDYWVTFNEP 306 (653)
Q Consensus 272 GW~n~e-~vd~Fa~YA~~vf~~fGDr--Vk~WiT~NEP 306 (653)
.+.+ -++.=..-++.+.++||.. +.-|-.=+|+
T Consensus 95 --~~~~~~~~~~~~v~~el~~~yg~h~sf~GWYip~E~ 130 (166)
T PF14488_consen 95 --GDLDWEAERNKQVADELWQRYGHHPSFYGWYIPYEI 130 (166)
T ss_pred --cCHHHHHHHHHHHHHHHHHHHcCCCCCceEEEeccc
Confidence 1111 1111122455566677754 3334444443
No 47
>KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism]
Probab=71.34 E-value=17 Score=42.98 Aligned_cols=92 Identities=21% Similarity=0.227 Sum_probs=71.1
Q ss_pred hHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEe--------ccCCCCcc
Q 006261 195 PDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTL--------FHHSLPAW 266 (653)
Q Consensus 195 ~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL--------~HwDLP~w 266 (653)
|++=|+.+|++|+|+.-.=+-|.-.+|.+ |..|.+|.-=..++|..+.++|+-.++-+ .|=.+|.|
T Consensus 51 W~~~i~k~k~~Gln~IqtYVfWn~Hep~~------g~y~FsG~~DlvkFikl~~~~GLyv~LRiGPyIcaEw~~GG~P~w 124 (649)
T KOG0496|consen 51 WPDLIKKAKAGGLNVIQTYVFWNLHEPSP------GKYDFSGRYDLVKFIKLIHKAGLYVILRIGPYICAEWNFGGLPWW 124 (649)
T ss_pred hHHHHHHHHhcCCceeeeeeecccccCCC------CcccccchhHHHHHHHHHHHCCeEEEecCCCeEEecccCCCcchh
Confidence 46778999999999999999999999985 77899997666678888899997755532 35677888
Q ss_pred ccccCCCC----ChhhHHHHHHHHHHHHHH
Q 006261 267 AGEYGGWK----LEKTIDYFMDFTRLVVDS 292 (653)
Q Consensus 267 L~~~GGW~----n~e~vd~Fa~YA~~vf~~ 292 (653)
|...-|-. |+-+-.++.+|.+.++..
T Consensus 125 L~~~pg~~~Rt~nepfk~~~~~~~~~iv~~ 154 (649)
T KOG0496|consen 125 LRNVPGIVFRTDNEPFKAEMERWTTKIVPM 154 (649)
T ss_pred hhhCCceEEecCChHHHHHHHHHHHHHHHH
Confidence 86543322 677777888888887763
No 48
>PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This entry represents a family of putative cellulase enzymes.; PDB: 3GYC_B.
Probab=70.25 E-value=7.3 Score=33.95 Aligned_cols=18 Identities=28% Similarity=0.468 Sum_probs=12.7
Q ss_pred HHHhcC--ccceEEEccC-cc
Q 006261 290 VDSVSD--IVDYWVTFNE-PH 307 (653)
Q Consensus 290 f~~fGD--rVk~WiT~NE-P~ 307 (653)
+++||+ +|.+|-.+|| |+
T Consensus 2 v~~~~~~~~Il~Wdl~NE~p~ 22 (88)
T PF12876_consen 2 VTRFGYDPRILAWDLWNEPPN 22 (88)
T ss_dssp HHHTT-GGGEEEEESSTTTT-
T ss_pred chhhcCCCCEEEEEeecCCCC
Confidence 445554 5999999999 76
No 49
>KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism]
Probab=67.81 E-value=2.2 Score=49.04 Aligned_cols=112 Identities=18% Similarity=0.212 Sum_probs=71.7
Q ss_pred CCeeEEEEeecccccCCcCC-CCCccceEEEcCCCCccccccchHHHHHHHHHcCCCCcchhh-hhhH---HHHHHHHhc
Q 006261 497 VPVIGYLFWTISDNWEWADG-YGPKFGLVAVDRANNLARIPRPSYHLFTKVVTTGKVTREDRA-RAWS---ELQLAAKQK 571 (653)
Q Consensus 497 V~V~GY~~WSLlDNfEW~~G-Y~~RFGL~~VD~~~~l~R~PK~Sa~wY~~ii~~~~i~~~~~~-~~~~---~l~~~a~~~ 571 (653)
..-.-+.-|.|-+.++|... |.....+|..|.-.+..+.-+.... ......|. =.+. .++++.++
T Consensus 384 ~~~~~v~P~Glr~~L~yiK~~Y~np~iyItENG~~d~~~~~~~~~~---------~l~D~~Ri~Y~~~~L~~~~kAi~~- 453 (524)
T KOG0626|consen 384 SDWLPVYPWGLRKLLNYIKDKYGNPPIYITENGFDDLDGGTKSLEV---------ALKDTKRIEYLQNHLQAVLKAIKE- 453 (524)
T ss_pred ccceeeccHHHHHHHHHHHhhcCCCcEEEEeCCCCcccccccchhh---------hhcchHHHHHHHHHHHHHHHHHHh-
Confidence 33344568999999999887 8888888887754332222111111 01111121 1222 34455433
Q ss_pred cCCCcccccccccccccCCCCCCCCCCCCCCCccceeeeecCCCCccchhhhhhhc
Q 006261 572 KTRPFYRAVNKHGLMYAGGLDEPTQRPYIQRDWRFGHYQMEGLQDPLSRLSRCILR 627 (653)
Q Consensus 572 k~~p~~~~v~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 627 (653)
.+||=.|-++.-.+|-..+.+-. ++|||.|.|+ ++||+.|..+.-..
T Consensus 454 ------dgvnv~GYf~WSLmDnfEw~~Gy--~~RFGlyyVD-f~d~l~R~pK~Sa~ 500 (524)
T KOG0626|consen 454 ------DGVNVKGYFVWSLLDNFEWLDGY--KVRFGLYYVD-FKDPLKRYPKLSAK 500 (524)
T ss_pred ------cCCceeeEEEeEcccchhhhcCc--ccccccEEEe-CCCCCcCCchhHHH
Confidence 34688888888899988877744 4999999999 99999887776544
No 50
>smart00642 Aamy Alpha-amylase domain.
Probab=64.00 E-value=20 Score=35.16 Aligned_cols=68 Identities=19% Similarity=0.262 Sum_probs=45.4
Q ss_pred cCCCChHHHHHHHHhcCCCeEEeccccccccC--CCCCCCC----CCcCCh--HHHHHHHHHHHHHHHcCCeEEEEec
Q 006261 190 RFWSDPDIELKLAKDTGVSVFRLGIDWSRIMP--AEPVNGL----KETVNF--AALERYKWIINRVRSYGMKVMLTLF 259 (653)
Q Consensus 190 ~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P--~~~~~G~----~G~vN~--~GLd~Y~~LId~L~~~GIePiVTL~ 259 (653)
+-|....+-++-++++|+++.-++--+..... .. .|. --.+|+ -..+=.++||++|+++||++|+.+.
T Consensus 16 G~~~gi~~~l~yl~~lG~~~I~l~Pi~~~~~~~~~~--~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 16 GDLQGIIEKLDYLKDLGVTAIWLSPIFESPQGYPSY--HGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECcceeCCCCCCCC--CCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 55666778888999999999988776544431 00 000 001111 1235578999999999999999864
No 51
>PLN02361 alpha-amylase
Probab=49.28 E-value=35 Score=38.32 Aligned_cols=69 Identities=13% Similarity=0.223 Sum_probs=46.2
Q ss_pred cCCCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChH--HHHHHHHHHHHHHHcCCeEEEEe
Q 006261 190 RFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFA--ALERYKWIINRVRSYGMKVMLTL 258 (653)
Q Consensus 190 ~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~--GLd~Y~~LId~L~~~GIePiVTL 258 (653)
.+|....+-++-++++|+++.=++-...-.-+.|--...--.+|.. ..+=+++||++|+++||++|+.+
T Consensus 26 ~~w~~i~~kl~~l~~lG~t~iwl~P~~~~~~~~GY~~~d~y~~~~~~Gt~~el~~li~~~h~~gi~vi~D~ 96 (401)
T PLN02361 26 DWWRNLEGKVPDLAKSGFTSAWLPPPSQSLAPEGYLPQNLYSLNSAYGSEHLLKSLLRKMKQYNVRAMADI 96 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEeCCCCcCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 4788899999999999999998776554333322000000011111 23447899999999999999975
No 52
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily. The DRE-TIM metallolyase superfamily includes 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".
Probab=44.75 E-value=85 Score=32.07 Aligned_cols=83 Identities=14% Similarity=0.111 Sum_probs=57.0
Q ss_pred HHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccccCCCCC
Q 006261 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKL 275 (653)
Q Consensus 196 ~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~~GGW~n 275 (653)
+++++.+++.|++..|++++-+-+.-.-. .+.=.+..++...+.|..+++.|++..+.+....-|
T Consensus 77 ~~~i~~a~~~g~~~i~i~~~~s~~~~~~~----~~~~~~~~~~~~~~~i~~a~~~G~~v~~~~~~~~~~----------- 141 (265)
T cd03174 77 EKGIERALEAGVDEVRIFDSASETHSRKN----LNKSREEDLENAEEAIEAAKEAGLEVEGSLEDAFGC----------- 141 (265)
T ss_pred hhhHHHHHhCCcCEEEEEEecCHHHHHHH----hCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEeecCC-----------
Confidence 88999999999999999998773211100 001112245667788999999999999999664433
Q ss_pred hhhHHHHHHHHHHHHHHhc
Q 006261 276 EKTIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 276 ~e~vd~Fa~YA~~vf~~fG 294 (653)
....+.+.++++.+. .+|
T Consensus 142 ~~~~~~l~~~~~~~~-~~g 159 (265)
T cd03174 142 KTDPEYVLEVAKALE-EAG 159 (265)
T ss_pred CCCHHHHHHHHHHHH-HcC
Confidence 244566777777765 445
No 53
>cd07945 DRE_TIM_CMS Leptospira interrogans citramalate synthase (CMS) and related proteins, N-terminal catalytic TIM barrel domain. Citramalate synthase (CMS) catalyzes the conversion of pyruvate and acetyl-CoA to (R)-citramalate in the first dedicated step of the citramalate pathway. Citramalate is only found in Leptospira interrogans and a few other microorganisms. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center con
Probab=43.95 E-value=71 Score=34.01 Aligned_cols=86 Identities=19% Similarity=0.183 Sum_probs=64.1
Q ss_pred ChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccccCCC
Q 006261 194 DPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGW 273 (653)
Q Consensus 194 ~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~~GGW 273 (653)
+-+.|++++++.|++..+++++=|...-... -+.--.+.++-..++|..++++|+++.+++-+|+.|.
T Consensus 75 ~~~~~~~~A~~~g~~~i~i~~~~S~~h~~~~----~~~t~~e~l~~~~~~i~~a~~~G~~v~~~~~d~~~~~-------- 142 (280)
T cd07945 75 DGDKSVDWIKSAGAKVLNLLTKGSLKHCTEQ----LRKTPEEHFADIREVIEYAIKNGIEVNIYLEDWSNGM-------- 142 (280)
T ss_pred CcHHHHHHHHHCCCCEEEEEEeCCHHHHHHH----HCcCHHHHHHHHHHHHHHHHhCCCEEEEEEEeCCCCC--------
Confidence 4477999999999999999996665544310 1223367788899999999999999999999887774
Q ss_pred CChhhHHHHHHHHHHHHHHhc
Q 006261 274 KLEKTIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 274 ~n~e~vd~Fa~YA~~vf~~fG 294 (653)
+..++++.++++.+.+ .|
T Consensus 143 --r~~~~~~~~~~~~~~~-~G 160 (280)
T cd07945 143 --RDSPDYVFQLVDFLSD-LP 160 (280)
T ss_pred --cCCHHHHHHHHHHHHH-cC
Confidence 1235677788877654 45
No 54
>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism]
Probab=43.66 E-value=1.2e+02 Score=32.79 Aligned_cols=58 Identities=14% Similarity=0.176 Sum_probs=44.1
Q ss_pred cCCCccccccCCCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEec
Q 006261 181 NVPHPEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF 259 (653)
Q Consensus 181 n~~~~~~a~~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~ 259 (653)
++++.+-+|..-++|..|+++++.-+. ..|. . | .|...+ .++.-.+.+.|++.++.++
T Consensus 51 ~~~n~dGtCKSa~~~~sDLe~l~~~t~-~IR~-------Y---------~-sDCn~l---e~v~pAa~~~g~kv~lGiw 108 (305)
T COG5309 51 GPYNDDGTCKSADQVASDLELLASYTH-SIRT-------Y---------G-SDCNTL---ENVLPAAEASGFKVFLGIW 108 (305)
T ss_pred cccCCCCCCcCHHHHHhHHHHhccCCc-eEEE-------e---------e-ccchhh---hhhHHHHHhcCceEEEEEe
Confidence 566688899999999999999998886 4442 1 1 333334 3688889999999998885
No 55
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=42.63 E-value=58 Score=30.96 Aligned_cols=56 Identities=11% Similarity=0.153 Sum_probs=40.1
Q ss_pred hHHHHHHHHhcCCCeEEecc------cc--ccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEec
Q 006261 195 PDIELKLAKDTGVSVFRLGI------DW--SRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF 259 (653)
Q Consensus 195 ~~eDI~LmkelGv~~yRfSI------sW--sRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~ 259 (653)
.++=++.+|++|+|+.-+-. +| +.+-+. ....+ -+...++|+.|+++||++++=+-
T Consensus 2 ~~~~~~~lk~~~v~si~i~a~~h~g~ayYPt~~~~~--------hp~L~-~Dllge~v~a~h~~Girv~ay~~ 65 (132)
T PF14871_consen 2 PEQFVDTLKEAHVNSITIFAKCHGGYAYYPTKVGPR--------HPGLK-RDLLGEQVEACHERGIRVPAYFD 65 (132)
T ss_pred HHHHHHHHHHhCCCEEEEEcccccEEEEccCCCCcC--------CCCCC-cCHHHHHHHHHHHCCCEEEEEEe
Confidence 46678999999999999833 33 333222 22233 47788999999999999998553
No 56
>PLN00196 alpha-amylase; Provisional
Probab=41.49 E-value=39 Score=38.22 Aligned_cols=72 Identities=11% Similarity=0.093 Sum_probs=46.6
Q ss_pred cCCCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCCh---HHHHHHHHHHHHHHHcCCeEEEEe--ccC
Q 006261 190 RFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNF---AALERYKWIINRVRSYGMKVMLTL--FHH 261 (653)
Q Consensus 190 ~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~---~GLd~Y~~LId~L~~~GIePiVTL--~Hw 261 (653)
++|....+.+.-+++||+++.=++-...-.-+.|--...--.+|. -..+=+++||++++++||++|+.. .|-
T Consensus 41 g~~~~i~~kldyL~~LGvtaIWL~P~~~s~s~hGY~~~D~y~ld~~~fGt~~elk~Lv~~aH~~GIkVilDvV~NH~ 117 (428)
T PLN00196 41 GWYNFLMGKVDDIAAAGITHVWLPPPSHSVSEQGYMPGRLYDLDASKYGNEAQLKSLIEAFHGKGVQVIADIVINHR 117 (428)
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCccccCCCCcccCCCHHHHHHHHHHHHHCCCEEEEEECccCc
Confidence 356667899999999999999888655433222100000011221 112347899999999999999974 564
No 57
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=39.96 E-value=1.7e+02 Score=35.94 Aligned_cols=100 Identities=17% Similarity=0.254 Sum_probs=61.9
Q ss_pred cCCCeEEeccc-cccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccC---CCCcc--------c-cc--
Q 006261 205 TGVSVFRLGID-WSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHH---SLPAW--------A-GE-- 269 (653)
Q Consensus 205 lGv~~yRfSIs-WsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~Hw---DLP~w--------L-~~-- 269 (653)
+=++++++.+. |-+ ..+ .=++|..-.-.=+.||+.|++.||+-++-+... |.|+. + .+
T Consensus 294 IP~d~~~lD~~~~~~--~~~-----~F~wd~~~FP~pk~mi~~l~~~Gikl~~~i~P~i~~d~~~~~e~~~~Gy~~k~~~ 366 (772)
T COG1501 294 IPLDVFVLDIDFWMD--NWG-----DFTWDPDRFPDPKQMIAELHEKGIKLIVIINPYIKQDSPLFKEAIEKGYFVKDPD 366 (772)
T ss_pred CcceEEEEeehhhhc--ccc-----ceEECcccCCCHHHHHHHHHhcCceEEEEeccccccCCchHHHHHHCCeEEECCC
Confidence 44789999996 875 111 012222222223479999999999999988743 33331 0 00
Q ss_pred -----------cC---CCCChhhHHHHHHHHHHHHHHhcCccceEEEccCcceeeec
Q 006261 270 -----------YG---GWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCML 312 (653)
Q Consensus 270 -----------~G---GW~n~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v~~~~ 312 (653)
.+ -++||+..+++.+....-+-.+|= .-+|.=+|||.++...
T Consensus 367 g~~~~~~~w~~~~a~~DFtnp~~r~Ww~~~~~~~l~d~Gv-~g~W~D~nEp~~~~~~ 422 (772)
T COG1501 367 GEIYQADFWPGNSAFPDFTNPDAREWWASDKKKNLLDLGV-DGFWNDMNEPEPFDGD 422 (772)
T ss_pred CCEeeecccCCcccccCCCCHHHHHHHHHHHHhHHHhcCc-cEEEccCCCCcccccc
Confidence 01 267999999999733222333332 5679999999988754
No 58
>PRK05799 coproporphyrinogen III oxidase; Provisional
Probab=39.55 E-value=1.1e+02 Score=33.55 Aligned_cols=95 Identities=18% Similarity=0.239 Sum_probs=52.9
Q ss_pred HHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccccCCCCC
Q 006261 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKL 275 (653)
Q Consensus 196 ~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~~GGW~n 275 (653)
++.+++|+++|++ |+||...-.-++- +.. -|... ..+-+.+.|+.+++.||..+-.-+=+++|.
T Consensus 99 ~e~l~~l~~~G~~--rvsiGvqS~~d~~-L~~-l~R~~--~~~~~~~ai~~l~~~g~~~v~~dli~GlPg---------- 162 (374)
T PRK05799 99 EEKLKILKSMGVN--RLSIGLQAWQNSL-LKY-LGRIH--TFEEFLENYKLARKLGFNNINVDLMFGLPN---------- 162 (374)
T ss_pred HHHHHHHHHcCCC--EEEEECccCCHHH-HHH-cCCCC--CHHHHHHHHHHHHHcCCCcEEEEeecCCCC----------
Confidence 6899999999999 5555554443321 000 01111 234566789999999998553333566772
Q ss_pred hhhHHHHHHHHHHHHHHhcCccceEEEccCcc
Q 006261 276 EKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPH 307 (653)
Q Consensus 276 ~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~ 307 (653)
++.+.|.+-.+.+.+.=-+.|..+.-.-+|.
T Consensus 163 -qt~e~~~~~l~~~~~l~~~~is~y~l~~~pg 193 (374)
T PRK05799 163 -QTLEDWKETLEKVVELNPEHISCYSLIIEEG 193 (374)
T ss_pred -CCHHHHHHHHHHHHhcCCCEEEEeccEecCC
Confidence 2345566555555443224444433333554
No 59
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase. Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=38.97 E-value=2.2e+02 Score=30.47 Aligned_cols=105 Identities=12% Similarity=0.164 Sum_probs=69.7
Q ss_pred hHHHHHHHHhcCC--CeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCc-------
Q 006261 195 PDIELKLAKDTGV--SVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPA------- 265 (653)
Q Consensus 195 ~~eDI~LmkelGv--~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~------- 265 (653)
..+-++.+++.|+ +++=+.+.|..-.- .=++|.+-..--..+|++|+++|+++++.+.=+-.+.
T Consensus 32 v~~~~~~~~~~~iP~d~i~iD~~w~~~~g-------~f~~d~~~FPdp~~mi~~l~~~G~k~~l~i~P~i~~~s~~~~e~ 104 (303)
T cd06592 32 VLNYAQEIIDNGFPNGQIEIDDNWETCYG-------DFDFDPTKFPDPKGMIDQLHDLGFRVTLWVHPFINTDSENFREA 104 (303)
T ss_pred HHHHHHHHHHcCCCCCeEEeCCCccccCC-------ccccChhhCCCHHHHHHHHHHCCCeEEEEECCeeCCCCHHHHhh
Confidence 3566778888885 57777777854321 1234443333356799999999999998776432221
Q ss_pred -----ccccc-C-------------C---CCChhhHHHHHHHHHHHHHHhcCccceEEEccCcc
Q 006261 266 -----WAGEY-G-------------G---WKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPH 307 (653)
Q Consensus 266 -----wL~~~-G-------------G---W~n~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~ 307 (653)
++... | + ++||+..+++.+..+.++...|= --+|+=+|||.
T Consensus 105 ~~~g~~vk~~~g~~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gv-dg~w~D~~E~~ 167 (303)
T cd06592 105 VEKGYLVSEPSGDIPALTRWWNGTAAVLDFTNPEAVDWFLSRLKSLQEKYGI-DSFKFDAGEAS 167 (303)
T ss_pred hhCCeEEECCCCCCCcccceecCCcceEeCCCHHHHHHHHHHHHHHHHHhCC-cEEEeCCCCcc
Confidence 11111 1 1 67899999999999888877763 34578899996
No 60
>PRK05692 hydroxymethylglutaryl-CoA lyase; Provisional
Probab=38.52 E-value=1e+02 Score=33.04 Aligned_cols=88 Identities=14% Similarity=0.066 Sum_probs=63.2
Q ss_pred ChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEecc-CCCCccccccCC
Q 006261 194 DPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFH-HSLPAWAGEYGG 272 (653)
Q Consensus 194 ~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~H-wDLP~wL~~~GG 272 (653)
.-.+|+++..+.|++.+++.++=|...-.. .-+.--++.++-..+.|+..+++|++..+++.. |+.|. .|
T Consensus 80 ~~~~~ie~A~~~g~~~v~i~~~~s~~~~~~----n~~~~~~e~l~~~~~~v~~ak~~g~~v~~~i~~~~~~~~-----~~ 150 (287)
T PRK05692 80 PNLKGLEAALAAGADEVAVFASASEAFSQK----NINCSIAESLERFEPVAEAAKQAGVRVRGYVSCVLGCPY-----EG 150 (287)
T ss_pred cCHHHHHHHHHcCCCEEEEEEecCHHHHHH----HhCCCHHHHHHHHHHHHHHHHHcCCEEEEEEEEEecCCC-----CC
Confidence 358999999999999999998766543211 012223467888999999999999999888764 56552 23
Q ss_pred CCChhhHHHHHHHHHHHHHHhc
Q 006261 273 WKLEKTIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 273 W~n~e~vd~Fa~YA~~vf~~fG 294 (653)
. -..+.+.++++.+.+ .|
T Consensus 151 ~---~~~~~~~~~~~~~~~-~G 168 (287)
T PRK05692 151 E---VPPEAVADVAERLFA-LG 168 (287)
T ss_pred C---CCHHHHHHHHHHHHH-cC
Confidence 2 236778888888764 45
No 61
>PRK12581 oxaloacetate decarboxylase; Provisional
Probab=38.37 E-value=1.1e+02 Score=35.20 Aligned_cols=73 Identities=16% Similarity=0.358 Sum_probs=56.3
Q ss_pred CCChHHH-----HHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCcc
Q 006261 192 WSDPDIE-----LKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAW 266 (653)
Q Consensus 192 y~~~~eD-----I~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~w 266 (653)
|..|.+| ++++++-|++.+|..-.... ++--...|+.+++.|....+++.|=+.|
T Consensus 99 y~~ypddvv~~fv~~a~~~Gidi~Rifd~lnd------------------~~n~~~ai~~ak~~G~~~~~~i~yt~sp-- 158 (468)
T PRK12581 99 YRHYADDIVDKFISLSAQNGIDVFRIFDALND------------------PRNIQQALRAVKKTGKEAQLCIAYTTSP-- 158 (468)
T ss_pred ccCCcchHHHHHHHHHHHCCCCEEEEcccCCC------------------HHHHHHHHHHHHHcCCEEEEEEEEEeCC--
Confidence 5557778 99999999999998654321 2224568999999999999999987766
Q ss_pred ccccCCCCChhhHHHHHHHHHHHHHHhc
Q 006261 267 AGEYGGWKLEKTIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 267 L~~~GGW~n~e~vd~Fa~YA~~vf~~fG 294 (653)
..+++++.+.|+.+.+ .|
T Consensus 159 ---------~~t~~y~~~~a~~l~~-~G 176 (468)
T PRK12581 159 ---------VHTLNYYLSLVKELVE-MG 176 (468)
T ss_pred ---------cCcHHHHHHHHHHHHH-cC
Confidence 3367889999998764 45
No 62
>cd07939 DRE_TIM_NifV Streptomyces rubellomurinus FrbC and related proteins, catalytic TIM barrel domain. FrbC (NifV) of Streptomyces rubellomurinus catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate to form homocitrate and CoA, a reaction similar to one catalyzed by homocitrate synthase. The gene encoding FrbC is one of several genes required for the biosynthesis of FR900098, a potent antimalarial antibiotic. This protein is also required for assembly of the nitrogenase MoFe complex but its exact role is unknown. This family also includes the NifV proteins of Heliobacterium chlorum and Gluconacetobacter diazotrophicus, which appear to be orthologous to FrbC. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarbox
Probab=38.26 E-value=87 Score=32.61 Aligned_cols=81 Identities=16% Similarity=0.281 Sum_probs=56.4
Q ss_pred HHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccccCCCCC
Q 006261 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKL 275 (653)
Q Consensus 196 ~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~~GGW~n 275 (653)
.+|++.+.+.|++..|+.++.|-+.-... -+.=-++.++-..++++.++++|+++.+++ |. .+
T Consensus 72 ~~~v~~a~~~g~~~i~i~~~~s~~~~~~~----~~~~~~~~~~~~~~~i~~a~~~G~~v~~~~-----~~-----~~--- 134 (259)
T cd07939 72 KEDIEAALRCGVTAVHISIPVSDIHLAHK----LGKDRAWVLDQLRRLVGRAKDRGLFVSVGA-----ED-----AS--- 134 (259)
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHH----hCCCHHHHHHHHHHHHHHHHHCCCeEEEee-----cc-----CC---
Confidence 78999999999999999998887643210 011234678888999999999999877554 21 12
Q ss_pred hhhHHHHHHHHHHHHHHhc
Q 006261 276 EKTIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 276 ~e~vd~Fa~YA~~vf~~fG 294 (653)
+...+...+.++.+.+ +|
T Consensus 135 ~~~~~~~~~~~~~~~~-~G 152 (259)
T cd07939 135 RADPDFLIEFAEVAQE-AG 152 (259)
T ss_pred CCCHHHHHHHHHHHHH-CC
Confidence 2335666777776653 55
No 63
>PF07488 Glyco_hydro_67M: Glycosyl hydrolase family 67 middle domain; InterPro: IPR011100 Alpha-glucuronidases, components of an ensemble of enzymes central to the recycling of photosynthetic biomass, remove the alpha-1,2 linked 4-O-methyl glucuronic acid from xylans. This family represents the central catalytic domain of alpha-glucuronidase [].; GO: 0046559 alpha-glucuronidase activity, 0045493 xylan catabolic process, 0005576 extracellular region; PDB: 1MQP_A 1K9E_A 1MQQ_A 1L8N_A 1K9D_A 1MQR_A 1K9F_A 1GQL_A 1GQI_B 1GQJ_B ....
Probab=38.17 E-value=1.9e+02 Score=31.68 Aligned_cols=114 Identities=13% Similarity=0.080 Sum_probs=68.7
Q ss_pred chhhhcccccccccCCCcc----ccccCCCChHHHHHHHHhcCCCeEEec---cccccccCCCCCCCCCCcCChHHHHHH
Q 006261 168 ENEEVHHKVTAWHNVPHPE----ERLRFWSDPDIELKLAKDTGVSVFRLG---IDWSRIMPAEPVNGLKETVNFAALERY 240 (653)
Q Consensus 168 ~~~~~~~~~~~~~n~~~~~----~a~~~y~~~~eDI~LmkelGv~~yRfS---IsWsRI~P~~~~~G~~G~vN~~GLd~Y 240 (653)
-||+...+++|-+.+.+-= .-..-..||.+--++++++|+|..-+. ..-.++. .+-++-+
T Consensus 28 hWDN~dgsiERGYaG~Sif~~~~~~~~~~~R~~~YARllASiGINgvvlNNVNa~~~~Lt-------------~~~l~~v 94 (328)
T PF07488_consen 28 HWDNLDGSIERGYAGKSIFFWDGLPRRDLTRYRDYARLLASIGINGVVLNNVNANPKLLT-------------PEYLDKV 94 (328)
T ss_dssp --B-TTS-BTT--SSS-SSEETTEETS--HHHHHHHHHHHHTT--EEE-S-SS--CGGGS-------------TTTHHHH
T ss_pred cccCCCCceecccCcccccccCCCcccchhHHHHHHHHHhhcCCceEEecccccChhhcC-------------HHHHHHH
Confidence 4788777777765543311 011123577888899999999987542 1222222 2336677
Q ss_pred HHHHHHHHHcCCeEEEEeccCCCCccccc--cCCCCChhhHHHHHHHHHHHHHHhcC
Q 006261 241 KWIINRVRSYGMKVMLTLFHHSLPAWAGE--YGGWKLEKTIDYFMDFTRLVVDSVSD 295 (653)
Q Consensus 241 ~~LId~L~~~GIePiVTL~HwDLP~wL~~--~GGW~n~e~vd~Fa~YA~~vf~~fGD 295 (653)
.++-+-++..||++.+++. |.-|..+.. .---+++++..++.+=++.+.+...|
T Consensus 95 ~~lAdvfRpYGIkv~LSvn-FasP~~lggL~TaDPld~~V~~WW~~k~~eIY~~IPD 150 (328)
T PF07488_consen 95 ARLADVFRPYGIKVYLSVN-FASPIELGGLPTADPLDPEVRQWWKDKADEIYSAIPD 150 (328)
T ss_dssp HHHHHHHHHTT-EEEEEE--TTHHHHTTS-S---TTSHHHHHHHHHHHHHHHHH-TT
T ss_pred HHHHHHHhhcCCEEEEEee-ccCCcccCCcCcCCCCCHHHHHHHHHHHHHHHHhCCC
Confidence 8899999999999999995 677766521 11246899999999999999999877
No 64
>PRK14040 oxaloacetate decarboxylase; Provisional
Probab=36.70 E-value=1.3e+02 Score=35.78 Aligned_cols=69 Identities=20% Similarity=0.255 Sum_probs=49.2
Q ss_pred HHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccccCCCCC
Q 006261 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKL 275 (653)
Q Consensus 196 ~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~~GGW~n 275 (653)
++|++..++.|++.+|...+.+-+ +--...|+..+++|....+++.+=+.|
T Consensus 100 ~~~v~~a~~~Gid~~rifd~lnd~------------------~~~~~ai~~ak~~G~~~~~~i~yt~~p----------- 150 (593)
T PRK14040 100 ERFVERAVKNGMDVFRVFDAMNDP------------------RNLETALKAVRKVGAHAQGTLSYTTSP----------- 150 (593)
T ss_pred HHHHHHHHhcCCCEEEEeeeCCcH------------------HHHHHHHHHHHHcCCeEEEEEEEeeCC-----------
Confidence 344999999999999999654332 224467888999999888777654445
Q ss_pred hhhHHHHHHHHHHHHHHhc
Q 006261 276 EKTIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 276 ~e~vd~Fa~YA~~vf~~fG 294 (653)
..+.+++.+.++.+.+ .|
T Consensus 151 ~~~~~~~~~~a~~l~~-~G 168 (593)
T PRK14040 151 VHTLQTWVDLAKQLED-MG 168 (593)
T ss_pred ccCHHHHHHHHHHHHH-cC
Confidence 2357788888887653 34
No 65
>PRK12399 tagatose 1,6-diphosphate aldolase; Reviewed
Probab=36.08 E-value=2.3e+02 Score=31.19 Aligned_cols=60 Identities=12% Similarity=0.117 Sum_probs=50.4
Q ss_pred HHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCC
Q 006261 197 IELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLP 264 (653)
Q Consensus 197 eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP 264 (653)
-.++.+|++|.++..|=+=|. |++ ...+|..-.+|-+++.++|+++||-=++-+.-+|.+
T Consensus 109 wS~~rike~GadavK~Llyy~---pD~-----~~~in~~k~a~vervg~eC~a~dipf~lE~ltY~~~ 168 (324)
T PRK12399 109 WSAKRIKEEGADAVKFLLYYD---VDE-----PDEINEQKKAYIERIGSECVAEDIPFFLEILTYDEK 168 (324)
T ss_pred hhHHHHHHhCCCeEEEEEEEC---CCC-----CHHHHHHHHHHHHHHHHHHHHCCCCeEEEEeeccCc
Confidence 358899999999999988775 543 246899999999999999999999998888776655
No 66
>cd07948 DRE_TIM_HCS Saccharomyces cerevisiae homocitrate synthase and related proteins, catalytic TIM barrel domain. Homocitrate synthase (HCS) catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate to form homocitrate, the first step in the lysine biosynthesis pathway. This family includes the Yarrowia lipolytica LYS1 protein as well as the Saccharomyces cerevisiae LYS20 and LYS21 proteins. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. Th
Probab=36.06 E-value=59 Score=34.28 Aligned_cols=60 Identities=20% Similarity=0.155 Sum_probs=46.1
Q ss_pred HHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEec
Q 006261 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF 259 (653)
Q Consensus 196 ~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~ 259 (653)
.+|++.+.+.|++..|+.++=|...-... .+.=-.+.++...++|..++++|+++.+++-
T Consensus 74 ~~di~~a~~~g~~~i~i~~~~S~~~~~~~----~~~~~~e~~~~~~~~i~~a~~~G~~v~~~~e 133 (262)
T cd07948 74 MDDARIAVETGVDGVDLVFGTSPFLREAS----HGKSITEIIESAVEVIEFVKSKGIEVRFSSE 133 (262)
T ss_pred HHHHHHHHHcCcCEEEEEEecCHHHHHHH----hCCCHHHHHHHHHHHHHHHHHCCCeEEEEEE
Confidence 77999999999999999987655433210 0111256788899999999999999998885
No 67
>PLN02746 hydroxymethylglutaryl-CoA lyase
Probab=35.87 E-value=1.1e+02 Score=33.85 Aligned_cols=87 Identities=11% Similarity=-0.007 Sum_probs=64.1
Q ss_pred hHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEecc-CCCCccccccCCC
Q 006261 195 PDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFH-HSLPAWAGEYGGW 273 (653)
Q Consensus 195 ~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~H-wDLP~wL~~~GGW 273 (653)
-.+|++.+.+.|++...+.++=|...-... .+.--.+.++-+.++|+.++++|++..+++-. |..|.. |
T Consensus 123 n~~die~A~~~g~~~v~i~~s~Sd~h~~~n----~~~t~~e~l~~~~~~v~~Ak~~Gl~v~~~is~~fg~p~~-----~- 192 (347)
T PLN02746 123 NLKGFEAAIAAGAKEVAVFASASESFSKSN----INCSIEESLVRYREVALAAKKHSIPVRGYVSCVVGCPIE-----G- 192 (347)
T ss_pred CHHHHHHHHHcCcCEEEEEEecCHHHHHHH----hCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEeeecCCcc-----C-
Confidence 489999999999999999987776644320 12234678899999999999999999888854 666632 2
Q ss_pred CChhhHHHHHHHHHHHHHHhc
Q 006261 274 KLEKTIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 274 ~n~e~vd~Fa~YA~~vf~~fG 294 (653)
+-.++.+.++++.+.+ .|
T Consensus 193 --r~~~~~l~~~~~~~~~-~G 210 (347)
T PLN02746 193 --PVPPSKVAYVAKELYD-MG 210 (347)
T ss_pred --CCCHHHHHHHHHHHHH-cC
Confidence 2336777888888754 45
No 68
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain. This family of bacterial enzymes is sequence-similar to 4-hydroxy-2-oxovalerate aldolase (HOA) but its exact function is unknown. This family includes the Bacteroides vulgatus Bvu_2661 protein and belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues t
Probab=35.77 E-value=1.4e+02 Score=31.46 Aligned_cols=67 Identities=16% Similarity=0.231 Sum_probs=51.1
Q ss_pred HHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccccCCCCC
Q 006261 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKL 275 (653)
Q Consensus 196 ~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~~GGW~n 275 (653)
.+|++.+.+.|++..|+++..+. ++-..++++.++++|+++.+++.+-.
T Consensus 85 ~~~l~~a~~~gv~~iri~~~~~~------------------~~~~~~~i~~ak~~G~~v~~~~~~a~------------- 133 (266)
T cd07944 85 IDLLEPASGSVVDMIRVAFHKHE------------------FDEALPLIKAIKEKGYEVFFNLMAIS------------- 133 (266)
T ss_pred HHHHHHHhcCCcCEEEEeccccc------------------HHHHHHHHHHHHHCCCeEEEEEEeec-------------
Confidence 58999999999999999874432 45567899999999999999887621
Q ss_pred hhhHHHHHHHHHHHHHHhc
Q 006261 276 EKTIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 276 ~e~vd~Fa~YA~~vf~~fG 294 (653)
....+.+.++++.+.+ +|
T Consensus 134 ~~~~~~~~~~~~~~~~-~g 151 (266)
T cd07944 134 GYSDEELLELLELVNE-IK 151 (266)
T ss_pred CCCHHHHHHHHHHHHh-CC
Confidence 1246777888887654 45
No 69
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
Probab=35.43 E-value=1.1e+02 Score=33.61 Aligned_cols=70 Identities=11% Similarity=0.171 Sum_probs=45.0
Q ss_pred HHHHHHHHHcCCeEEEEeccCCC-CccccccC---CCCChhhHHHHHHHHHHHHHHhcCccceEEEccCcceeeec
Q 006261 241 KWIINRVRSYGMKVMLTLFHHSL-PAWAGEYG---GWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCML 312 (653)
Q Consensus 241 ~~LId~L~~~GIePiVTL~HwDL-P~wL~~~G---GW~n~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v~~~~ 312 (653)
+.++++|++.|++.++.+.-+-. -......| -|+|++..++|.+.-+.+.+ .|= .-.|+=+|||.+++..
T Consensus 67 ~~mv~~L~~~G~klv~~i~P~i~~g~~~~~~~~~pDftnp~ar~wW~~~~~~l~~-~Gv-~~~W~DmnEp~~~~~~ 140 (332)
T cd06601 67 KEMFDNLHNKGLKCSTNITPVISYGGGLGSPGLYPDLGRPDVREWWGNQYKYLFD-IGL-EFVWQDMTTPAIMPSY 140 (332)
T ss_pred HHHHHHHHHCCCeEEEEecCceecCccCCCCceeeCCCCHHHHHHHHHHHHHHHh-CCC-ceeecCCCCcccccCC
Confidence 57999999999998776542100 00000111 37789999998776654443 343 3389999999987653
No 70
>PRK14041 oxaloacetate decarboxylase; Provisional
Probab=35.43 E-value=1.3e+02 Score=34.65 Aligned_cols=73 Identities=19% Similarity=0.331 Sum_probs=55.2
Q ss_pred CCChHHH-----HHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCcc
Q 006261 192 WSDPDIE-----LKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAW 266 (653)
Q Consensus 192 y~~~~eD-----I~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~w 266 (653)
|..|.+| |+.+.+.|++.+|+.++-+-+ +--...|+..+++|+....++.+-..|
T Consensus 89 ~~~~~dDvv~~fv~~A~~~Gvd~irif~~lnd~------------------~n~~~~i~~ak~~G~~v~~~i~~t~~p-- 148 (467)
T PRK14041 89 YRHYADDVVELFVKKVAEYGLDIIRIFDALNDI------------------RNLEKSIEVAKKHGAHVQGAISYTVSP-- 148 (467)
T ss_pred cccccchhhHHHHHHHHHCCcCEEEEEEeCCHH------------------HHHHHHHHHHHHCCCEEEEEEEeccCC--
Confidence 4667778 999999999999999876543 224567899999999999888664445
Q ss_pred ccccCCCCChhhHHHHHHHHHHHHHHhc
Q 006261 267 AGEYGGWKLEKTIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 267 L~~~GGW~n~e~vd~Fa~YA~~vf~~fG 294 (653)
....+++.++|+.+.+ .|
T Consensus 149 ---------~~t~e~~~~~a~~l~~-~G 166 (467)
T PRK14041 149 ---------VHTLEYYLEFARELVD-MG 166 (467)
T ss_pred ---------CCCHHHHHHHHHHHHH-cC
Confidence 2347888999987654 45
No 71
>COG5520 O-Glycosyl hydrolase [Cell envelope biogenesis, outer membrane]
Probab=34.96 E-value=7.1e+02 Score=28.14 Aligned_cols=92 Identities=21% Similarity=0.193 Sum_probs=53.0
Q ss_pred hcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHH--HHHHHHHcCCeEEEEeccCCCCccccc----cCCCCChh
Q 006261 204 DTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKW--IINRVRSYGMKVMLTLFHHSLPAWAGE----YGGWKLEK 277 (653)
Q Consensus 204 elGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~--LId~L~~~GIePiVTL~HwDLP~wL~~----~GGW~n~e 277 (653)
++|++..|+-|.=.+.-- .|..|. .|++ .-...+.+|++.|.|= |.-|.|... .||=..+-
T Consensus 77 ~lg~si~Rv~I~~ndfsl-------~g~~d~----w~kels~Ak~~in~g~ivfASP--WspPa~Mktt~~~ngg~~g~L 143 (433)
T COG5520 77 QLGFSILRVPIDSNDFSL-------GGSADN----WYKELSTAKSAINPGMIVFASP--WSPPASMKTTNNRNGGNAGRL 143 (433)
T ss_pred ccCceEEEEEeccccccc-------CCCcch----hhhhcccchhhcCCCcEEEecC--CCCchhhhhccCcCCcccccc
Confidence 477888887776555432 134442 2333 2334678888888774 777877632 34411122
Q ss_pred hHHHHHHHHHHHH------HHhcCccceEEEccCcce
Q 006261 278 TIDYFMDFTRLVV------DSVSDIVDYWVTFNEPHV 308 (653)
Q Consensus 278 ~vd~Fa~YA~~vf------~~fGDrVk~WiT~NEP~v 308 (653)
=.+.+++||+++. ++-|--+.+-..=|||.-
T Consensus 144 k~e~Ya~yA~~l~~fv~~m~~nGvnlyalSVQNEPd~ 180 (433)
T COG5520 144 KYEKYADYADYLNDFVLEMKNNGVNLYALSVQNEPDY 180 (433)
T ss_pred chhHhHHHHHHHHHHHHHHHhCCCceeEEeeccCCcc
Confidence 2345566665542 344555677778899963
No 72
>PRK05402 glycogen branching enzyme; Provisional
Probab=33.65 E-value=1.8e+02 Score=35.16 Aligned_cols=93 Identities=11% Similarity=0.146 Sum_probs=57.3
Q ss_pred hHHHH-HHHHhcCCCeEEeccccc---------------cccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEe
Q 006261 195 PDIEL-KLAKDTGVSVFRLGIDWS---------------RIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTL 258 (653)
Q Consensus 195 ~~eDI-~LmkelGv~~yRfSIsWs---------------RI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL 258 (653)
..+.+ +-+|+||+++.=+.=-.. .|.|. -|. .+=.++||++|.++||++|+.+
T Consensus 267 i~~~l~~ylk~LGv~~i~L~Pi~e~~~~~~~GY~~~~y~ai~~~------~Gt-----~~dfk~lV~~~H~~Gi~VilD~ 335 (726)
T PRK05402 267 LADQLIPYVKEMGFTHVELLPIAEHPFDGSWGYQPTGYYAPTSR------FGT-----PDDFRYFVDACHQAGIGVILDW 335 (726)
T ss_pred HHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCcccCCCcCcc------cCC-----HHHHHHHHHHHHHCCCEEEEEE
Confidence 34453 778999999987653211 12221 122 3346889999999999999985
Q ss_pred --ccCCC-----------Cccccc------cC-------CCCChhhHHHHHHHHHHHHHHhcCccceE
Q 006261 259 --FHHSL-----------PAWAGE------YG-------GWKLEKTIDYFMDFTRLVVDSVSDIVDYW 300 (653)
Q Consensus 259 --~HwDL-----------P~wL~~------~G-------GW~n~e~vd~Fa~YA~~vf~~fGDrVk~W 300 (653)
.|+.. |.+... +. .+.++++.+.+.+=++.-+++|| |+-|
T Consensus 336 V~NH~~~~~~~~~~~~~~~~y~~~~~~~~~~~~w~~~~~n~~~~~v~~~l~~~~~~W~~e~~--iDG~ 401 (726)
T PRK05402 336 VPAHFPKDAHGLARFDGTALYEHADPREGEHPDWGTLIFNYGRNEVRNFLVANALYWLEEFH--IDGL 401 (726)
T ss_pred CCCCCCCCccchhccCCCcceeccCCcCCccCCCCCccccCCCHHHHHHHHHHHHHHHHHhC--CcEE
Confidence 36522 111110 11 23467888888888888787775 4444
No 73
>PLN02784 alpha-amylase
Probab=33.41 E-value=88 Score=38.65 Aligned_cols=69 Identities=14% Similarity=0.157 Sum_probs=47.1
Q ss_pred cCCCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChH--HHHHHHHHHHHHHHcCCeEEEEe
Q 006261 190 RFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFA--ALERYKWIINRVRSYGMKVMLTL 258 (653)
Q Consensus 190 ~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~--GLd~Y~~LId~L~~~GIePiVTL 258 (653)
.||....+.++-++++|+++.=++-...-.-+.|--...-..+|.. ..+=++.||+.|+++||++|+.+
T Consensus 518 ~w~~~I~ekldyL~~LG~taIWLpP~~~s~s~~GY~p~D~y~lds~yGT~~ELk~LI~a~H~~GIkVIlDi 588 (894)
T PLN02784 518 RWYMELGEKAAELSSLGFTVVWLPPPTESVSPEGYMPKDLYNLNSRYGTIDELKDLVKSFHEVGIKVLGDA 588 (894)
T ss_pred chHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCcCcccccccCcCcCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 6788999999999999999998776544433332000000112211 23457899999999999999984
No 74
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=32.96 E-value=2.3e+02 Score=30.67 Aligned_cols=100 Identities=20% Similarity=0.372 Sum_probs=63.2
Q ss_pred CChHHHHHHHHhcCCCeEEecccc-------ccccCCCC-CCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEe-ccC--
Q 006261 193 SDPDIELKLAKDTGVSVFRLGIDW-------SRIMPAEP-VNGLKETVNFAALERYKWIINRVRSYGMKVMLTL-FHH-- 261 (653)
Q Consensus 193 ~~~~eDI~LmkelGv~~yRfSIsW-------sRI~P~~~-~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL-~Hw-- 261 (653)
...++-++.|+++|+|+.=+-+.+ |.++|... ..|..|. + .|.|....+|++++++||+...-+ +-+
T Consensus 19 ~~~~~~l~~l~~~~~N~V~~qVr~~gda~Y~S~~~p~s~~~~g~~~~-~-pg~DpL~~~I~eaHkrGlevHAW~~~~~~~ 96 (311)
T PF02638_consen 19 EQIDEMLDDLKSAGFNAVFVQVRPRGDALYPSDIEPWSGYLTGKQGK-D-PGFDPLEFMIEEAHKRGLEVHAWFRVGFNA 96 (311)
T ss_pred HHHHHHHHHHHHcCCCEEEEEEEeCcEEEecccccccccccCCCCCC-C-CCccHHHHHHHHHHHcCCEEEEEEEeecCC
Confidence 345788899999999997766544 33444211 0111111 1 234555669999999999987554 111
Q ss_pred --------CCCcccc--------cc----C--CCCC---hhhHHHHHHHHHHHHHHhc
Q 006261 262 --------SLPAWAG--------EY----G--GWKL---EKTIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 262 --------DLP~wL~--------~~----G--GW~n---~e~vd~Fa~YA~~vf~~fG 294 (653)
..|.|+. .+ | .|+| |++.++..+-++.++++|.
T Consensus 97 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i~~~v~Eiv~~Yd 154 (311)
T PF02638_consen 97 PDVSHILKKHPEWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYIIDIVKEIVKNYD 154 (311)
T ss_pred CchhhhhhcCchhheecCCCceeecccCCCCceEECCCCHHHHHHHHHHHHHHHhcCC
Confidence 2355532 12 2 2564 7888999999999999995
No 75
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=32.70 E-value=1.1e+02 Score=33.19 Aligned_cols=70 Identities=17% Similarity=0.222 Sum_probs=49.6
Q ss_pred HHHHHHHHHcCCeEEEEeccCCCC-----ccc--c--------cc------------C---CCCChhhHHHHHHHHHHHH
Q 006261 241 KWIINRVRSYGMKVMLTLFHHSLP-----AWA--G--------EY------------G---GWKLEKTIDYFMDFTRLVV 290 (653)
Q Consensus 241 ~~LId~L~~~GIePiVTL~HwDLP-----~wL--~--------~~------------G---GW~n~e~vd~Fa~YA~~vf 290 (653)
+.+|++|+++|++.++.++-+-.+ ..- . .. + -+.|++.+++|.+..+.+.
T Consensus 67 ~~mi~~L~~~G~k~~~~~~P~v~~~~~~~~y~e~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~ 146 (339)
T cd06603 67 EKMQEKLASKGRKLVTIVDPHIKRDDGYYVYKEAKDKGYLVKNSDGGDFEGWCWPGSSSWPDFLNPEVRDWWASLFSYDK 146 (339)
T ss_pred HHHHHHHHHCCCEEEEEecCceecCCCCHHHHHHHHCCeEEECCCCCEEEEEECCCCcCCccCCChhHHHHHHHHHHHHh
Confidence 569999999999998888755332 110 0 00 1 3678999999999888776
Q ss_pred HHhc-CccceEEEccCcceee
Q 006261 291 DSVS-DIVDYWVTFNEPHVFC 310 (653)
Q Consensus 291 ~~fG-DrVk~WiT~NEP~v~~ 310 (653)
...+ .-+-.|+=+|||.++.
T Consensus 147 ~~~~~g~~g~w~D~~Ep~~f~ 167 (339)
T cd06603 147 YKGSTENLYIWNDMNEPSVFN 167 (339)
T ss_pred hcccCCCceEEeccCCccccC
Confidence 5432 2346799999998764
No 76
>TIGR02090 LEU1_arch isopropylmalate/citramalate/homocitrate synthases. Methanogens, then should and aparrently do contain all three of these enzymes. Unfortunately, phylogenetic trees do not resolve into three unambiguous clades, making assignment of function to particular genes problematic. Other archaea which lack a threonine dehydratase (mainly Euryarchaeota) should contain both a CimA and a LeuA gene. This is true of, for example, archaeoglobus fulgidis, but not for the Pyrococci which have none in this clade, but one in TIGR00973 and one in TIGRT00977 which may fulfill these roles. Other species which have only one hit to this model and lack threonine dehydratase are very likely LeuA enzymes.
Probab=32.18 E-value=1.2e+02 Score=33.52 Aligned_cols=84 Identities=15% Similarity=0.110 Sum_probs=58.4
Q ss_pred CChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccccCC
Q 006261 193 SDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGG 272 (653)
Q Consensus 193 ~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~~GG 272 (653)
.-.++|++.+.+.|++..|++++-|.+.-... -+.--.+.++-..+.|..+++.|++..+++-..
T Consensus 71 r~~~~di~~a~~~g~~~i~i~~~~Sd~~~~~~----~~~~~~~~~~~~~~~i~~ak~~G~~v~~~~eda----------- 135 (363)
T TIGR02090 71 RALKKDIDKAIDCGVDSIHTFIATSPIHLKYK----LKKSRDEVLEKAVEAVEYAKEHGLIVEFSAEDA----------- 135 (363)
T ss_pred ccCHHHHHHHHHcCcCEEEEEEcCCHHHHHHH----hCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeec-----------
Confidence 33589999999999999999988877643210 011234567888899999999999988776421
Q ss_pred CCChhhHHHHHHHHHHHHHHhc
Q 006261 273 WKLEKTIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 273 W~n~e~vd~Fa~YA~~vf~~fG 294 (653)
.+...+.+.++++.+. ..|
T Consensus 136 --~r~~~~~l~~~~~~~~-~~g 154 (363)
T TIGR02090 136 --TRTDIDFLIKVFKRAE-EAG 154 (363)
T ss_pred --CCCCHHHHHHHHHHHH-hCC
Confidence 1334566777777654 344
No 77
>PRK12858 tagatose 1,6-diphosphate aldolase; Reviewed
Probab=31.87 E-value=2.2e+02 Score=31.45 Aligned_cols=53 Identities=15% Similarity=0.263 Sum_probs=43.8
Q ss_pred HHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEec
Q 006261 199 LKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF 259 (653)
Q Consensus 199 I~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~ 259 (653)
++-++++|.++.-+-+-|. |+. ...+|..-+++-.++.++|.+.||.-++-+.
T Consensus 112 ve~a~~~GAdAVk~lv~~~---~d~-----~~~~~~~~~~~l~rv~~ec~~~giPlllE~l 164 (340)
T PRK12858 112 VRRIKEAGADAVKLLLYYR---PDE-----DDAINDRKHAFVERVGAECRANDIPFFLEPL 164 (340)
T ss_pred HHHHHHcCCCEEEEEEEeC---CCc-----chHHHHHHHHHHHHHHHHHHHcCCceEEEEe
Confidence 6778999999999999996 542 1246888899999999999999999888543
No 78
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism]
Probab=31.61 E-value=1e+02 Score=37.24 Aligned_cols=60 Identities=17% Similarity=0.303 Sum_probs=41.4
Q ss_pred HHHHHhcCCCeEE----eccccccccCCCC--------------CCCCCCcCCh---HHHHHHHHHHHHHHHcCCeEEEE
Q 006261 199 LKLAKDTGVSVFR----LGIDWSRIMPAEP--------------VNGLKETVNF---AALERYKWIINRVRSYGMKVMLT 257 (653)
Q Consensus 199 I~LmkelGv~~yR----fSIsWsRI~P~~~--------------~~G~~G~vN~---~GLd~Y~~LId~L~~~GIePiVT 257 (653)
|+-+|+|||+++. |++.+-+...+.. .+| ....|+ ..+.=+++||.+|.++||++|+.
T Consensus 206 i~yLk~LGvtaVeLLPV~~~~~~~~l~~~gl~n~WGYdP~~fFAp~~-~Yss~p~p~~~i~EfK~mV~~lHkaGI~VILD 284 (697)
T COG1523 206 IDYLKDLGVTAVELLPVFDFYDEPHLDKSGLNNNWGYDPLNFFAPEG-RYASNPEPATRIKEFKDMVKALHKAGIEVILD 284 (697)
T ss_pred HHHHHHhCCceEEEecceEEeccccccccccccccCCCcccccCCCc-cccCCCCcchHHHHHHHHHHHHHHcCCEEEEE
Confidence 9999999999998 4555555553221 011 122333 24666899999999999999997
Q ss_pred ec
Q 006261 258 LF 259 (653)
Q Consensus 258 L~ 259 (653)
+.
T Consensus 285 VV 286 (697)
T COG1523 285 VV 286 (697)
T ss_pred Ee
Confidence 53
No 79
>PRK12313 glycogen branching enzyme; Provisional
Probab=31.22 E-value=2.3e+02 Score=33.69 Aligned_cols=92 Identities=13% Similarity=0.262 Sum_probs=57.5
Q ss_pred CCChHHH-HHHHHhcCCCeEEeccc--------c-------ccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEE
Q 006261 192 WSDPDIE-LKLAKDTGVSVFRLGID--------W-------SRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVM 255 (653)
Q Consensus 192 y~~~~eD-I~LmkelGv~~yRfSIs--------W-------sRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePi 255 (653)
|....+. ++-+|+||+++.=+.=- | -.|.|. -|+ .+=+++||++|.++||++|
T Consensus 169 ~~~~~~~ll~yl~~LGv~~i~L~Pi~~~~~~~~~GY~~~~y~~i~~~------~Gt-----~~d~k~lv~~~H~~Gi~Vi 237 (633)
T PRK12313 169 YRELADELIPYVKEMGYTHVEFMPLMEHPLDGSWGYQLTGYFAPTSR------YGT-----PEDFMYLVDALHQNGIGVI 237 (633)
T ss_pred HHHHHHHHHHHHHHcCCCEEEeCchhcCCCCCCCCCCCcCcCcCCCC------CCC-----HHHHHHHHHHHHHCCCEEE
Confidence 4444556 48999999999875432 2 112221 122 3347899999999999999
Q ss_pred EEe--ccCCCCc----ccc--------c-----cCCC-------CChhhHHHHHHHHHHHHHHhc
Q 006261 256 LTL--FHHSLPA----WAG--------E-----YGGW-------KLEKTIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 256 VTL--~HwDLP~----wL~--------~-----~GGW-------~n~e~vd~Fa~YA~~vf~~fG 294 (653)
+.+ .|..-.. ++. + ..+| .|+++.+.+.+=++.-+++||
T Consensus 238 lD~V~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~n~~~~~vr~~l~~~~~~W~~~~~ 302 (633)
T PRK12313 238 LDWVPGHFPKDDDGLAYFDGTPLYEYQDPRRAENPDWGALNFDLGKNEVRSFLISSALFWLDEYH 302 (633)
T ss_pred EEECCCCCCCCcccccccCCCcceeecCCCCCcCCCCCCcccCCCCHHHHHHHHHHHHHHHHHhC
Confidence 984 4643111 110 0 0123 367888888888888788775
No 80
>PRK04161 tagatose 1,6-diphosphate aldolase; Reviewed
Probab=30.79 E-value=2.3e+02 Score=31.28 Aligned_cols=60 Identities=13% Similarity=0.136 Sum_probs=50.9
Q ss_pred HHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCC
Q 006261 197 IELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLP 264 (653)
Q Consensus 197 eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP 264 (653)
-+++.+|++|.++..|=+=|. |++ .-.+|..-.+|-+++.++|+++||-=++-+.-+|.+
T Consensus 111 ws~~rike~GadavK~Llyy~---pD~-----~~ein~~k~a~vervg~eC~a~dipf~lE~l~Yd~~ 170 (329)
T PRK04161 111 WSVKRLKEAGADAVKFLLYYD---VDG-----DEEINDQKQAYIERIGSECTAEDIPFFLELLTYDER 170 (329)
T ss_pred hhHHHHHHhCCCeEEEEEEEC---CCC-----CHHHHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCc
Confidence 368999999999999988775 443 246899999999999999999999999988877655
No 81
>PRK12331 oxaloacetate decarboxylase; Provisional
Probab=30.67 E-value=2e+02 Score=32.90 Aligned_cols=70 Identities=14% Similarity=0.293 Sum_probs=53.1
Q ss_pred hHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccccCCCC
Q 006261 195 PDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWK 274 (653)
Q Consensus 195 ~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~~GGW~ 274 (653)
.++||+.+.+.|++.+|+.++-+.+. | ....|+..+++|+...+++..-+-|
T Consensus 98 v~~~v~~A~~~Gvd~irif~~lnd~~------------n------~~~~v~~ak~~G~~v~~~i~~t~~p---------- 149 (448)
T PRK12331 98 VESFVQKSVENGIDIIRIFDALNDVR------------N------LETAVKATKKAGGHAQVAISYTTSP---------- 149 (448)
T ss_pred HHHHHHHHHHCCCCEEEEEEecCcHH------------H------HHHHHHHHHHcCCeEEEEEEeecCC----------
Confidence 36778999999999999998665441 1 4458999999999999888775555
Q ss_pred ChhhHHHHHHHHHHHHHHhc
Q 006261 275 LEKTIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 275 n~e~vd~Fa~YA~~vf~~fG 294 (653)
....+++.+.|+.+.+ .|
T Consensus 150 -~~~~~~~~~~a~~l~~-~G 167 (448)
T PRK12331 150 -VHTIDYFVKLAKEMQE-MG 167 (448)
T ss_pred -CCCHHHHHHHHHHHHH-cC
Confidence 2456788888888754 45
No 82
>TIGR00539 hemN_rel putative oxygen-independent coproporphyrinogen III oxidase. Experimentally determined examples of oxygen-independent coproporphyrinogen III oxidase, an enzyme that replaces HemF function under anaerobic conditions, belong to a family of proteins described by the model hemN. This model, hemN_rel, models a closely related protein, shorter at the amino end and lacking the region containing the motif PYRT[SC]YP found in members of the hemN family. Several species, including E. coli, Helicobacter pylori, Aquifex aeolicus, and Chlamydia trachomatis, have members of both this family and the E. coli hemN family. The member of this family from Bacillus subtilis was shown to complement an hemF/hemN double mutant of Salmonella typimurium and to prevent accumulation of coproporphyrinogen III under anaerobic conditions, but the exact role of this protein is still uncertain. It is found in a number of species that do not synthesize heme de novo.
Probab=30.02 E-value=1.3e+02 Score=32.76 Aligned_cols=61 Identities=16% Similarity=0.147 Sum_probs=39.6
Q ss_pred HHHHHHHHhcCCCeEEeccc-cc-cccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCC
Q 006261 196 DIELKLAKDTGVSVFRLGID-WS-RIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLP 264 (653)
Q Consensus 196 ~eDI~LmkelGv~~yRfSIs-Ws-RI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP 264 (653)
++.++.|+++|++.+.++|. -+ +++.. . |.. ...+-+.+.|+.+++.|+.++-.-+=+++|
T Consensus 100 ~e~l~~l~~~Gv~risiGvqS~~~~~l~~-----l-gR~--~~~~~~~~ai~~l~~~G~~~v~~dli~GlP 162 (360)
T TIGR00539 100 AEWCKGLKGAGINRLSLGVQSFRDDKLLF-----L-GRQ--HSAKNIAPAIETALKSGIENISLDLMYGLP 162 (360)
T ss_pred HHHHHHHHHcCCCEEEEecccCChHHHHH-----h-CCC--CCHHHHHHHHHHHHHcCCCeEEEeccCCCC
Confidence 68999999999986666653 22 22221 0 111 124556789999999999876544456777
No 83
>cd06543 GH18_PF-ChiA-like PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain. Members of this domain family are found not only in archaea but also in eukaryotes and prokaryotes. PF-ChiA exhibits hydrolytic activity toward both colloidal and crystalline (beta/alpha) chitins at high temperature.
Probab=29.41 E-value=2.3e+02 Score=30.56 Aligned_cols=84 Identities=23% Similarity=0.158 Sum_probs=49.4
Q ss_pred HHHHhcCCCeEEeccc--cccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccccCCCCChh
Q 006261 200 KLAKDTGVSVFRLGID--WSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKLEK 277 (653)
Q Consensus 200 ~LmkelGv~~yRfSIs--WsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~~GGW~n~e 277 (653)
+.+.+.|++++=++.- -..-.|.- .|. ...+ ........|..|+++|++.+|.+=-|.-.... .+..
T Consensus 19 ~~~~~~g~~~v~lAFi~~~~~~~~~w--~g~-~~~~--~~~~~~~~i~~lk~~G~kViiS~GG~~g~~~~------~~~~ 87 (294)
T cd06543 19 TYAAATGVKAFTLAFIVASGGCKPAW--GGS-YPLD--QGGWIKSDIAALRAAGGDVIVSFGGASGTPLA------TSCT 87 (294)
T ss_pred HHHHHcCCCEEEEEEEEcCCCCcccC--CCC-CCcc--cchhHHHHHHHHHHcCCeEEEEecCCCCCccc------cCcc
Confidence 5778899999886643 12222210 000 0111 02234567999999999999988333321100 0346
Q ss_pred hHHHHHHHHHHHHHHhc
Q 006261 278 TIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 278 ~vd~Fa~YA~~vf~~fG 294 (653)
.++.|++....+.+.||
T Consensus 88 ~~~~~~~a~~~~i~~y~ 104 (294)
T cd06543 88 SADQLAAAYQKVIDAYG 104 (294)
T ss_pred cHHHHHHHHHHHHHHhC
Confidence 77888888888888886
No 84
>TIGR01210 conserved hypothetical protein TIGR01210. This family of exclusively archaeal proteins has no characterized close homologs. Several rounds of PSI-BLAST with a stringent cutoff of 1e-8 shows apparent similarity of the central region of this family to the central regions of the oxygen-independent coproporphyrinogen III dehydrogenase HemN and to other enzymes.
Probab=29.23 E-value=2.3e+02 Score=30.65 Aligned_cols=110 Identities=18% Similarity=0.244 Sum_probs=67.0
Q ss_pred HHHHHHHHhcCCC-eEEeccc-c-ccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccccCC
Q 006261 196 DIELKLAKDTGVS-VFRLGID-W-SRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGG 272 (653)
Q Consensus 196 ~eDI~LmkelGv~-~yRfSIs-W-sRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~~GG 272 (653)
++.+++|++.|++ ..=++++ - .+++-. .++-.. ..+-+.+.++.++++||...+.+. +++| +
T Consensus 117 ~e~L~~l~~aG~~~~v~iG~ES~~d~~L~~----~inKg~---t~~~~~~ai~~~~~~Gi~v~~~~i-~G~P-------~ 181 (313)
T TIGR01210 117 EEKLEELRKIGVNVEVAVGLETANDRIREK----SINKGS---TFEDFIRAAELARKYGAGVKAYLL-FKPP-------F 181 (313)
T ss_pred HHHHHHHHHcCCCEEEEEecCcCCHHHHHH----hhCCCC---CHHHHHHHHHHHHHcCCcEEEEEE-ecCC-------C
Confidence 8999999999987 3555552 1 112100 000011 235577899999999999666553 4556 2
Q ss_pred CCChhhHHHHHHHHHHHHHHhcCccceEEEccCcceeeeccccCCCCCC
Q 006261 273 WKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCMLTYCAGTWPG 321 (653)
Q Consensus 273 W~n~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v~~~~GY~~G~~PP 321 (653)
..-.+.++.+.+.++.+.+ +++.|....+.=+|......-|..|.+.|
T Consensus 182 ~se~ea~ed~~~ti~~~~~-l~~~vs~~~l~v~~gT~l~~~~~~G~~~p 229 (313)
T TIGR01210 182 LSEKEAIADMISSIRKCIP-VTDTVSINPTNVQKGTLVEFLWNRGLYRP 229 (313)
T ss_pred CChhhhHHHHHHHHHHHHh-cCCcEEEECCEEeCCCHHHHHHHcCCCCC
Confidence 2224678888888887764 45777777665566553333455566643
No 85
>TIGR02631 xylA_Arthro xylose isomerase, Arthrobacter type. This model describes a D-xylose isomerase that is also active as a D-glucose isomerase. It is tetrameric and dependent on a divalent cation Mg2+, Co2+ or Mn2+ as characterized in Arthrobacter. Members of this family differ substantially from the D-xylose isomerases of family TIGR02630.
Probab=28.97 E-value=6.7e+02 Score=28.02 Aligned_cols=78 Identities=17% Similarity=0.158 Sum_probs=47.6
Q ss_pred cccCCCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEE-EEeccCCCCcc
Q 006261 188 RLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVM-LTLFHHSLPAW 266 (653)
Q Consensus 188 a~~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePi-VTL~HwDLP~w 266 (653)
++.-+-+..+-++.++++|++.+=| ....+.|.+ ....+--..++++-..|.++||++. +|..-|..|.+
T Consensus 27 ~~~~~~~~~e~i~~la~~GfdgVE~--~~~dl~P~~-------~~~~e~~~~~~~lk~~L~~~GL~v~~v~~nl~~~~~~ 97 (382)
T TIGR02631 27 ATRTALDPVEAVHKLAELGAYGVTF--HDDDLIPFG-------APPQERDQIVRRFKKALDETGLKVPMVTTNLFSHPVF 97 (382)
T ss_pred CCCCCcCHHHHHHHHHHhCCCEEEe--cccccCCCC-------CChhHHHHHHHHHHHHHHHhCCeEEEeeccccCCccc
Confidence 3345668899999999999998843 334455642 1111111235678888999999954 45432222333
Q ss_pred ccccCCCCCh
Q 006261 267 AGEYGGWKLE 276 (653)
Q Consensus 267 L~~~GGW~n~ 276 (653)
..||+.++
T Consensus 98 --~~g~las~ 105 (382)
T TIGR02631 98 --KDGGFTSN 105 (382)
T ss_pred --cCCCCCCC
Confidence 33677775
No 86
>cd07938 DRE_TIM_HMGL 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain. 3-hydroxy-3-methylglutaryl-CoA lyase (HMGL) catalyzes the cleavage of HMG-CoA to acetyl-CoA and acetoacetate, one of the terminal steps in ketone body generation and leucine degradation, and is a key enzyme in the pathway that supplies metabolic fuel to extrahepatic tissues. Mutations in HMGL cause a human autosomal recessive disorder called primary metabolic aciduria that affects ketogenesis and leucine catabolism and can be fatal due to an inability to tolerate hypoglycemia. HMGL has a TIM barrel domain with a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. The cleavage of HMG-CoA requires the presence of a divalent cation like Mg2+ or Mn2+, and the reaction is thought to involve general acid/base catalysis. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropy
Probab=28.65 E-value=1.9e+02 Score=30.63 Aligned_cols=87 Identities=15% Similarity=0.141 Sum_probs=62.1
Q ss_pred hHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEec-cCCCCccccccCCC
Q 006261 195 PDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF-HHSLPAWAGEYGGW 273 (653)
Q Consensus 195 ~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~-HwDLP~wL~~~GGW 273 (653)
-.+|++.+.+.|++.+++.++=|.+.-..- -+.--.+.++...+.|..++++|+++.+++- -|+.|. +|
T Consensus 75 ~~~dv~~A~~~g~~~i~i~~~~Sd~~~~~~----~~~s~~~~~~~~~~~v~~ak~~G~~v~~~i~~~f~~~~-----~~- 144 (274)
T cd07938 75 NLRGAERALAAGVDEVAVFVSASETFSQKN----INCSIAESLERFEPVAELAKAAGLRVRGYVSTAFGCPY-----EG- 144 (274)
T ss_pred CHHHHHHHHHcCcCEEEEEEecCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEeEecCCC-----CC-
Confidence 378999999999999999987765432210 0112256788889999999999999998876 366662 22
Q ss_pred CChhhHHHHHHHHHHHHHHhc
Q 006261 274 KLEKTIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 274 ~n~e~vd~Fa~YA~~vf~~fG 294 (653)
+-..+.+.++++.+.+ .|
T Consensus 145 --~~~~~~~~~~~~~~~~-~G 162 (274)
T cd07938 145 --EVPPERVAEVAERLLD-LG 162 (274)
T ss_pred --CCCHHHHHHHHHHHHH-cC
Confidence 2346778888888764 44
No 87
>PRK09505 malS alpha-amylase; Reviewed
Probab=28.56 E-value=1.6e+02 Score=35.48 Aligned_cols=68 Identities=10% Similarity=0.258 Sum_probs=42.4
Q ss_pred hHHHHHHHHhcCCCeEEeccccccccC---CC--------CCCCC----CCcCCh--HHHHHHHHHHHHHHHcCCeEEEE
Q 006261 195 PDIELKLAKDTGVSVFRLGIDWSRIMP---AE--------PVNGL----KETVNF--AALERYKWIINRVRSYGMKVMLT 257 (653)
Q Consensus 195 ~~eDI~LmkelGv~~yRfSIsWsRI~P---~~--------~~~G~----~G~vN~--~GLd~Y~~LId~L~~~GIePiVT 257 (653)
..+-++-+++||+++.=++=-...|.- .+ .--|. -..+|+ -..+=+++||++++++||++|+.
T Consensus 232 i~~kLdyl~~LGv~aIwlsPi~~~~~~~~~~g~~g~~~~~~yhgY~~~D~~~id~~~Gt~~dfk~Lv~~aH~~Gi~VilD 311 (683)
T PRK09505 232 LTEKLDYLQQLGVNALWISSPLEQIHGWVGGGTKGDFPHYAYHGYYTLDWTKLDANMGTEADLRTLVDEAHQRGIRILFD 311 (683)
T ss_pred HHHhhHHHHHcCCCEEEeCccccccccccccccccCCCcCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 456678999999999988755444310 00 00000 001222 13455889999999999999998
Q ss_pred ec--cCC
Q 006261 258 LF--HHS 262 (653)
Q Consensus 258 L~--HwD 262 (653)
+. |-.
T Consensus 312 ~V~NH~~ 318 (683)
T PRK09505 312 VVMNHTG 318 (683)
T ss_pred ECcCCCc
Confidence 54 543
No 88
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=27.83 E-value=82 Score=35.88 Aligned_cols=73 Identities=16% Similarity=0.213 Sum_probs=45.8
Q ss_pred cCCCChHHHHHHHHhcCCCeEEeccccccccC---CC--CCCCC-------CCcCChH--HHHHHHHHHHHHHHcCCeEE
Q 006261 190 RFWSDPDIELKLAKDTGVSVFRLGIDWSRIMP---AE--PVNGL-------KETVNFA--ALERYKWIINRVRSYGMKVM 255 (653)
Q Consensus 190 ~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P---~~--~~~G~-------~G~vN~~--GLd~Y~~LId~L~~~GIePi 255 (653)
+.|....+-++-+++||+++.=++-...-.-. .+ +..-. .|.||+. ..+=+++||++|+++||++|
T Consensus 19 ~~~~~I~~kldyl~~LGvtaIwl~P~~~~~~~~~~hgY~~~D~~~~~~~~~~~~id~~fGt~~dl~~Li~~~H~~Gi~vi 98 (479)
T PRK09441 19 KLWNRLAERAPELAEAGITAVWLPPAYKGTSGGYDVGYGVYDLFDLGEFDQKGTVRTKYGTKEELLNAIDALHENGIKVY 98 (479)
T ss_pred cHHHHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCCeecccccccccccCCcCcCcCCHHHHHHHHHHHHHCCCEEE
Confidence 45666778899999999999987764432210 00 00000 0122221 24447899999999999999
Q ss_pred EEe--ccCC
Q 006261 256 LTL--FHHS 262 (653)
Q Consensus 256 VTL--~HwD 262 (653)
+.+ .|-.
T Consensus 99 ~D~V~NH~~ 107 (479)
T PRK09441 99 ADVVLNHKA 107 (479)
T ss_pred EEECccccc
Confidence 985 4643
No 89
>TIGR02660 nifV_homocitr homocitrate synthase NifV. This family consists of the NifV clade of homocitrate synthases, most of which are found in operons for nitrogen fixation. Members are closely homologous to enzymes that include 2-isopropylmalate synthase, (R)-citramalate synthase, and homocitrate synthases associated with other processes. The homocitrate made by this enzyme becomes a part of the iron-molybdenum cofactor of nitrogenase.
Probab=27.67 E-value=1.5e+02 Score=32.72 Aligned_cols=82 Identities=16% Similarity=0.231 Sum_probs=57.1
Q ss_pred hHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccccCCCC
Q 006261 195 PDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWK 274 (653)
Q Consensus 195 ~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~~GGW~ 274 (653)
-.+||+.+.+.|++..|+.++-|.+.-... -+.--.+.++-..+.|..++++|+++.+++-. ++
T Consensus 74 ~~~di~~a~~~g~~~i~i~~~~Sd~~~~~~----~~~s~~e~l~~~~~~i~~ak~~g~~v~~~~ed----------~~-- 137 (365)
T TIGR02660 74 RDADIEAAARCGVDAVHISIPVSDLQIEAK----LRKDRAWVLERLARLVSFARDRGLFVSVGGED----------AS-- 137 (365)
T ss_pred CHHHHHHHHcCCcCEEEEEEccCHHHHHHH----hCcCHHHHHHHHHHHHHHHHhCCCEEEEeecC----------CC--
Confidence 389999999999999999998876533210 01112456888889999999999987755321 22
Q ss_pred ChhhHHHHHHHHHHHHHHhc
Q 006261 275 LEKTIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 275 n~e~vd~Fa~YA~~vf~~fG 294 (653)
+...+.+.++++.+.+ +|
T Consensus 138 -r~~~~~l~~~~~~~~~-~G 155 (365)
T TIGR02660 138 -RADPDFLVELAEVAAE-AG 155 (365)
T ss_pred -CCCHHHHHHHHHHHHH-cC
Confidence 2336777778877654 55
No 90
>PRK12677 xylose isomerase; Provisional
Probab=26.82 E-value=8.8e+02 Score=27.12 Aligned_cols=80 Identities=13% Similarity=0.113 Sum_probs=49.7
Q ss_pred ccccccCCCChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEE-EEeccCCC
Q 006261 185 PEERLRFWSDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVM-LTLFHHSL 263 (653)
Q Consensus 185 ~~~a~~~y~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePi-VTL~HwDL 263 (653)
++.....+ ..+|-++.++++|++.+=+.. ..+.|.. ....+--...+++-..+.++||+.. +|...|..
T Consensus 24 g~~~~~~~-~~~E~v~~~a~~Gf~gVElh~--~~l~p~~-------~~~~~~~~~~~~lk~~l~~~GL~v~~v~~n~f~~ 93 (384)
T PRK12677 24 GDATRPPL-DPVEAVHKLAELGAYGVTFHD--DDLVPFG-------ATDAERDRIIKRFKKALDETGLVVPMVTTNLFTH 93 (384)
T ss_pred CCCCCCCC-CHHHHHHHHHHhCCCEEEecc--cccCCCC-------CChhhhHHHHHHHHHHHHHcCCeeEEEecCCCCC
Confidence 33434555 479999999999999886632 2344432 1111111235678888889999955 66665555
Q ss_pred CccccccCCCCCh
Q 006261 264 PAWAGEYGGWKLE 276 (653)
Q Consensus 264 P~wL~~~GGW~n~ 276 (653)
|.+ ..|++.++
T Consensus 94 p~~--~~g~lts~ 104 (384)
T PRK12677 94 PVF--KDGAFTSN 104 (384)
T ss_pred ccc--cCCcCCCC
Confidence 543 34788874
No 91
>cd07941 DRE_TIM_LeuA3 Desulfobacterium autotrophicum LeuA3 and related proteins, N-terminal catalytic TIM barrel domain. Desulfobacterium autotrophicum LeuA3 is sequence-similar to alpha-isopropylmalate synthase (LeuA) but its exact function is unknown. Members of this family have an N-terminal TIM barrel domain that belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of in
Probab=26.25 E-value=2e+02 Score=30.37 Aligned_cols=81 Identities=15% Similarity=0.092 Sum_probs=56.0
Q ss_pred HHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccC-CCCccccccCCCC
Q 006261 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHH-SLPAWAGEYGGWK 274 (653)
Q Consensus 196 ~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~Hw-DLP~wL~~~GGW~ 274 (653)
+.+++++++.|++..|+.++=|-+.-... -+.--++.++-..+.|+.+++.|+++.++.-+| |-+
T Consensus 81 ~~~~~~a~~~g~~~i~i~~~~sd~~~~~~----~~~~~~~~~~~~~~~i~~ak~~G~~v~~~~~~~~d~~---------- 146 (273)
T cd07941 81 DPNLQALLEAGTPVVTIFGKSWDLHVTEA----LGTTLEENLAMIRDSVAYLKSHGREVIFDAEHFFDGY---------- 146 (273)
T ss_pred hHHHHHHHhCCCCEEEEEEcCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHcCCeEEEeEEeccccC----------
Confidence 46899999999999999887554422110 012235678888999999999999998877666 211
Q ss_pred ChhhHHHHHHHHHHHHH
Q 006261 275 LEKTIDYFMDFTRLVVD 291 (653)
Q Consensus 275 n~e~vd~Fa~YA~~vf~ 291 (653)
+...+.+.++++.+.+
T Consensus 147 -~~~~~~~~~~~~~~~~ 162 (273)
T cd07941 147 -KANPEYALATLKAAAE 162 (273)
T ss_pred -CCCHHHHHHHHHHHHh
Confidence 2235666777777654
No 92
>PLN02389 biotin synthase
Probab=26.01 E-value=1.4e+02 Score=33.27 Aligned_cols=84 Identities=18% Similarity=0.147 Sum_probs=51.9
Q ss_pred CCCchhhhcccccccccCCCcc--ccccCCCChHHHHHHHHhcCCCeEEecccccc-ccCCCCCCCCCCcCChHHHHHHH
Q 006261 165 VPTENEEVHHKVTAWHNVPHPE--ERLRFWSDPDIELKLAKDTGVSVFRLGIDWSR-IMPAEPVNGLKETVNFAALERYK 241 (653)
Q Consensus 165 ~~~~~~~~~~~~~~~~n~~~~~--~a~~~y~~~~eDI~LmkelGv~~yRfSIsWsR-I~P~~~~~G~~G~vN~~GLd~Y~ 241 (653)
+|...+.+..-...... ..++ ...+. .-+|.++.||+.|++.|-.+++=++ +.|.- ... ...+.+-
T Consensus 148 e~~~~e~i~eiir~ik~-~~l~i~~s~G~--l~~E~l~~LkeAGld~~~~~LeTs~~~y~~i-----~~~---~s~e~rl 216 (379)
T PLN02389 148 RKTNFNQILEYVKEIRG-MGMEVCCTLGM--LEKEQAAQLKEAGLTAYNHNLDTSREYYPNV-----ITT---RSYDDRL 216 (379)
T ss_pred ChhHHHHHHHHHHHHhc-CCcEEEECCCC--CCHHHHHHHHHcCCCEEEeeecCChHHhCCc-----CCC---CCHHHHH
Confidence 44445555444444432 1222 22343 3489999999999999999887332 44431 111 1345667
Q ss_pred HHHHHHHHcCCeEEEEec
Q 006261 242 WIINRVRSYGMKVMLTLF 259 (653)
Q Consensus 242 ~LId~L~~~GIePiVTL~ 259 (653)
+.|+.+++.||+...++.
T Consensus 217 ~ti~~a~~~Gi~v~sg~I 234 (379)
T PLN02389 217 ETLEAVREAGISVCSGGI 234 (379)
T ss_pred HHHHHHHHcCCeEeEEEE
Confidence 899999999999877753
No 93
>TIGR00433 bioB biotin synthetase. Catalyzes the last step of the biotin biosynthesis pathway.
Probab=25.79 E-value=1.1e+02 Score=32.16 Aligned_cols=54 Identities=19% Similarity=0.233 Sum_probs=38.8
Q ss_pred HHHHHHHHhcCCCeEEeccccc-cccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEE
Q 006261 196 DIELKLAKDTGVSVFRLGIDWS-RIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLT 257 (653)
Q Consensus 196 ~eDI~LmkelGv~~yRfSIsWs-RI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVT 257 (653)
+|.++.||++|++.+-++++-+ .+.+. ..+. ...+.+.+.++.++++||...++
T Consensus 123 ~e~l~~Lk~aG~~~v~i~~E~~~~~~~~-----i~~~---~s~~~~~~ai~~l~~~Gi~v~~~ 177 (296)
T TIGR00433 123 PEQAKRLKDAGLDYYNHNLDTSQEFYSN-----IIST---HTYDDRVDTLENAKKAGLKVCSG 177 (296)
T ss_pred HHHHHHHHHcCCCEEEEcccCCHHHHhh-----ccCC---CCHHHHHHHHHHHHHcCCEEEEe
Confidence 8999999999999999999822 13322 1111 23456778899999999986544
No 94
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes.
Probab=25.43 E-value=2.8e+02 Score=29.50 Aligned_cols=105 Identities=15% Similarity=0.188 Sum_probs=66.2
Q ss_pred hHHHHHHHHhcC--CCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCC---Ccc---
Q 006261 195 PDIELKLAKDTG--VSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSL---PAW--- 266 (653)
Q Consensus 195 ~~eDI~LmkelG--v~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDL---P~w--- 266 (653)
.++-++.+++.| ++++=+.+.|.+-.-.+ .=.+|++-.---+.+|++|+++|++.++.+.-+.. |..
T Consensus 26 v~~~~~~~~~~~iP~d~~~lD~~w~~~~~~~-----~f~~d~~~FPd~~~~i~~l~~~G~~~~~~~~P~i~~~~~~~~e~ 100 (308)
T cd06593 26 VNEFADGMRERNLPCDVIHLDCFWMKEFQWC-----DFEFDPDRFPDPEGMLSRLKEKGFKVCLWINPYIAQKSPLFKEA 100 (308)
T ss_pred HHHHHHHHHHcCCCeeEEEEecccccCCcce-----eeEECcccCCCHHHHHHHHHHCCCeEEEEecCCCCCCchhHHHH
Confidence 467788999999 66677778887432100 11344433333568999999999998887764422 211
Q ss_pred -----cc-c-------------cCC---CCChhhHHHHHHHHHHHHHHhcCccc-eEEEccCcc
Q 006261 267 -----AG-E-------------YGG---WKLEKTIDYFMDFTRLVVDSVSDIVD-YWVTFNEPH 307 (653)
Q Consensus 267 -----L~-~-------------~GG---W~n~e~vd~Fa~YA~~vf~~fGDrVk-~WiT~NEP~ 307 (653)
|- + .++ ++|++..++|.+..+.+.+ .| |+ +|+=+|||.
T Consensus 101 ~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~-~G--id~~~~D~~e~~ 161 (308)
T cd06593 101 AEKGYLVKKPDGSVWQWDLWQPGMGIIDFTNPDACKWYKDKLKPLLD-MG--VDCFKTDFGERI 161 (308)
T ss_pred HHCCeEEECCCCCeeeecccCCCcccccCCCHHHHHHHHHHHHHHHH-hC--CcEEecCCCCCC
Confidence 10 0 012 6789999999887776554 44 44 456688863
No 95
>cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
Probab=25.19 E-value=2.3e+02 Score=30.08 Aligned_cols=95 Identities=7% Similarity=0.078 Sum_probs=60.9
Q ss_pred cccCCCChHHH-HHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCC---
Q 006261 188 RLRFWSDPDIE-LKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSL--- 263 (653)
Q Consensus 188 a~~~y~~~~eD-I~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDL--- 263 (653)
..+||..+.++ .+.+++.+-..=-+|..|-.|-|.+.+ .+.. ..++++.++++|++.++++.-|+-
T Consensus 4 ~~g~~~~~~~~~~~~~~~~~~~lt~v~p~w~~~~~~g~~---~~~~-------~~~~~~~a~~~~~kv~~~i~~~~~~~~ 73 (313)
T cd02874 4 VLGYYTPRNGSDYESLRANAPYLTYIAPFWYGVDADGTL---TGLP-------DERLIEAAKRRGVKPLLVITNLTNGNF 73 (313)
T ss_pred EEEEEecCCCchHHHHHHhcCCCCEEEEEEEEEcCCCCC---CCCC-------CHHHHHHHHHCCCeEEEEEecCCCCCC
Confidence 44677765555 788888888888899999999887532 2222 247899999999999999976651
Q ss_pred -CccccccCCCCChhhHHHHHHHHHHHHHHhc
Q 006261 264 -PAWAGEYGGWKLEKTIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 264 -P~wL~~~GGW~n~e~vd~Fa~YA~~vf~~fG 294 (653)
+..+. .--.+++..+.|++=.-..+++||
T Consensus 74 ~~~~~~--~~l~~~~~r~~fi~~iv~~l~~~~ 103 (313)
T cd02874 74 DSELAH--AVLSNPEARQRLINNILALAKKYG 103 (313)
T ss_pred CHHHHH--HHhcCHHHHHHHHHHHHHHHHHhC
Confidence 00000 001245555556555555555554
No 96
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=24.99 E-value=3.4e+02 Score=32.13 Aligned_cols=97 Identities=10% Similarity=0.135 Sum_probs=57.9
Q ss_pred CChHHHH-HHHHhcCCCeEEe-ccccccccC-CC--C-----CCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEec--c
Q 006261 193 SDPDIEL-KLAKDTGVSVFRL-GIDWSRIMP-AE--P-----VNGLKETVNFAALERYKWIINRVRSYGMKVMLTLF--H 260 (653)
Q Consensus 193 ~~~~eDI-~LmkelGv~~yRf-SIsWsRI~P-~~--~-----~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~--H 260 (653)
....+.+ +-+|+||+++.=+ .|..+.-.. .| + ++..-|. .+=.++||++|.++||++|+.+. |
T Consensus 156 ~~i~~~l~dyl~~LGvt~i~L~Pi~e~~~~~~wGY~~~~y~~~~~~~Gt-----~~dlk~lV~~~H~~Gi~VilD~V~NH 230 (613)
T TIGR01515 156 RELADQLIPYVKELGFTHIELLPVAEHPFDGSWGYQVTGYYAPTSRFGT-----PDDFMYFVDACHQAGIGVILDWVPGH 230 (613)
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCcccCcccccccCC-----HHHHHHHHHHHHHCCCEEEEEecccC
Confidence 3334554 8899999999987 333321000 00 0 0000122 23468899999999999999865 5
Q ss_pred CC-----------CCccccc------cCC-------CCChhhHHHHHHHHHHHHHHhc
Q 006261 261 HS-----------LPAWAGE------YGG-------WKLEKTIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 261 wD-----------LP~wL~~------~GG-------W~n~e~vd~Fa~YA~~vf~~fG 294 (653)
.. .|.+... ... +.++++.+.+.+=++.-+++|+
T Consensus 231 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~w~~~~~~~~~~~Vr~~l~~~~~~W~~ey~ 288 (613)
T TIGR01515 231 FPKDDHGLAEFDGTPLYEHKDPRDGEHWDWGTLIFDYGRPEVRNFLVANALYWAEFYH 288 (613)
T ss_pred cCCccchhhccCCCcceeccCCccCcCCCCCCceecCCCHHHHHHHHHHHHHHHHHhC
Confidence 42 1212110 011 2467888899998888888886
No 97
>COG3534 AbfA Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism]
Probab=24.50 E-value=1.2e+03 Score=27.27 Aligned_cols=97 Identities=19% Similarity=0.218 Sum_probs=55.7
Q ss_pred HHHHHHHHhcCCCeEEec-------ccccc-ccCCCCCCC-C-----CCcCChHHHHHHHHHHHHHHHcCCeEEEEeccC
Q 006261 196 DIELKLAKDTGVSVFRLG-------IDWSR-IMPAEPVNG-L-----KETVNFAALERYKWIINRVRSYGMKVMLTLFHH 261 (653)
Q Consensus 196 ~eDI~LmkelGv~~yRfS-------IsWsR-I~P~~~~~G-~-----~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~Hw 261 (653)
++=++++|+|.+...|+. -.|.. |=|....+- . .-+-|.=| -+++++.|...|.+|++.+.=
T Consensus 52 kDVle~lk~Lk~P~lR~PGGnFvs~Y~WeDGIGP~e~Rp~rldlaW~t~EtN~~G---t~EF~~~~e~iGaep~~avN~- 127 (501)
T COG3534 52 KDVLEALKDLKIPVLRWPGGNFVSGYHWEDGIGPREERPRRLDLAWGTTETNEFG---THEFMDWCELIGAEPYIAVNL- 127 (501)
T ss_pred HHHHHHHHhcCCceeecCCcccccccccccCcCchhhCchhhccccccccccccc---HHHHHHHHHHhCCceEEEEec-
Confidence 344689999999999963 23421 111100000 0 00122223 357999999999999999862
Q ss_pred CCCccccccCCCCChhhHHHHHHHHHHH--------HHHhcC----ccceEEEccCc
Q 006261 262 SLPAWAGEYGGWKLEKTIDYFMDFTRLV--------VDSVSD----IVDYWVTFNEP 306 (653)
Q Consensus 262 DLP~wL~~~GGW~n~e~vd~Fa~YA~~v--------f~~fGD----rVk~WiT~NEP 306 (653)
|. ..-+....|++||..= =...|- .||||+.=||-
T Consensus 128 ---------Gs-rgvd~ar~~vEY~n~pggtywsdlR~~~G~~~P~nvK~w~lGNEm 174 (501)
T COG3534 128 ---------GS-RGVDEARNWVEYCNHPGGTYWSDLRRENGREEPWNVKYWGLGNEM 174 (501)
T ss_pred ---------CC-ccHHHHHHHHHHccCCCCChhHHHHHhcCCCCCcccceEEecccc
Confidence 11 2235556666666431 122332 38999999995
No 98
>cd07943 DRE_TIM_HOA 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain. 4-hydroxy 2-ketovalerate aldolase (Also known as 4-hydroxy-2-ketovalerate aldolase and 4-hydroxy-2-oxopentanoate aldolase (HOA)) converts 4-hydroxy-2-oxopentanoate to acetaldehyde and pyruvate, the penultimate step in the meta-cleavage pathway for the degradation of phenols, cresols and catechol. This family includes the Escherichia coli MhpE aldolase, the Pseudomonas DmpG aldolase, and the Burkholderia xenovorans BphI pyruvate aldolase. In Pseudomonas, the DmpG aldolase tightly associates with a dehydrogenase (DmpF ) and is inactive without it. HOA has a canonical TIM-barrel fold with a C-terminal extension that forms a funnel leading to the active site. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate
Probab=24.26 E-value=2.3e+02 Score=29.49 Aligned_cols=67 Identities=24% Similarity=0.234 Sum_probs=49.0
Q ss_pred HHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccccCCCCC
Q 006261 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKL 275 (653)
Q Consensus 196 ~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~~GGW~n 275 (653)
.+|++.+++.|++..|+.++.+.+. -..+.++.+++.|++..+++-.- +..+
T Consensus 88 ~~~i~~a~~~g~~~iri~~~~s~~~------------------~~~~~i~~ak~~G~~v~~~~~~~----------~~~~ 139 (263)
T cd07943 88 VDDLKMAADLGVDVVRVATHCTEAD------------------VSEQHIGAARKLGMDVVGFLMMS----------HMAS 139 (263)
T ss_pred HHHHHHHHHcCCCEEEEEechhhHH------------------HHHHHHHHHHHCCCeEEEEEEec----------cCCC
Confidence 6899999999999999988776442 13568999999999999998531 2223
Q ss_pred hhhHHHHHHHHHHHHHHhc
Q 006261 276 EKTIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 276 ~e~vd~Fa~YA~~vf~~fG 294 (653)
.+.+.++++.+. ..|
T Consensus 140 ---~~~~~~~~~~~~-~~G 154 (263)
T cd07943 140 ---PEELAEQAKLME-SYG 154 (263)
T ss_pred ---HHHHHHHHHHHH-HcC
Confidence 366677777654 344
No 99
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A ....
Probab=23.85 E-value=5e+02 Score=29.28 Aligned_cols=96 Identities=18% Similarity=0.186 Sum_probs=59.3
Q ss_pred hHHHHHHHHhcCCCeEEeccccccccCCCCCCCC-CCcCC----hHHHHHHHHHHHHHHHcCCeEEEEec----------
Q 006261 195 PDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGL-KETVN----FAALERYKWIINRVRSYGMKVMLTLF---------- 259 (653)
Q Consensus 195 ~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~-~G~vN----~~GLd~Y~~LId~L~~~GIePiVTL~---------- 259 (653)
..+-++.++++|++.|=+.--|..---.. ..+. +-.+| +.|++ .+++.+++.||++=+=+-
T Consensus 60 i~~~a~~~~~~G~e~fviDDGW~~~r~~d-~~~~GdW~~~~~kFP~Gl~---~l~~~i~~~Gmk~GlW~ePe~v~~~S~l 135 (394)
T PF02065_consen 60 ILELADAAAELGYEYFVIDDGWFGGRDDD-NAGLGDWEPDPKKFPNGLK---PLADYIHSLGMKFGLWFEPEMVSPDSDL 135 (394)
T ss_dssp HHHHHHHHHHHT-SEEEE-SSSBCTESTT-TSTTSBECBBTTTSTTHHH---HHHHHHHHTT-EEEEEEETTEEESSSCH
T ss_pred HHHHHHHHHHhCCEEEEEcCccccccCCC-cccCCceeEChhhhCCcHH---HHHHHHHHCCCeEEEEeccccccchhHH
Confidence 35667899999999999888996431110 0000 01222 24654 699999999999866330
Q ss_pred cCCCCcccccc-------C------CCCChhhHHHHHHHHHHHHHHhc
Q 006261 260 HHSLPAWAGEY-------G------GWKLEKTIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 260 HwDLP~wL~~~-------G------GW~n~e~vd~Fa~YA~~vf~~fG 294 (653)
.-..|.|+... | ...++++.++..+-...+++.+|
T Consensus 136 ~~~hPdw~l~~~~~~~~~~r~~~vLD~~~pev~~~l~~~i~~ll~~~g 183 (394)
T PF02065_consen 136 YREHPDWVLRDPGRPPTLGRNQYVLDLSNPEVRDYLFEVIDRLLREWG 183 (394)
T ss_dssp CCSSBGGBTCCTTSE-ECBTTBEEB-TTSHHHHHHHHHHHHHHHHHTT
T ss_pred HHhCccceeecCCCCCcCcccceEEcCCCHHHHHHHHHHHHHHHHhcC
Confidence 12358786321 1 13478889998888888888887
No 100
>cd02803 OYE_like_FMN_family Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=23.36 E-value=9.1e+02 Score=25.62 Aligned_cols=32 Identities=16% Similarity=0.214 Sum_probs=29.5
Q ss_pred CcCChHHHHHHHHHHHHHHHcCCeEEEEeccC
Q 006261 230 ETVNFAALERYKWIINRVRSYGMKVMLTLFHH 261 (653)
Q Consensus 230 G~vN~~GLd~Y~~LId~L~~~GIePiVTL~Hw 261 (653)
+-+|.+-++-++++++.++++|-+.++=|+|-
T Consensus 69 ~~~~~~~~~~~~~~~~~vh~~g~~~~~Ql~h~ 100 (327)
T cd02803 69 GIYDDEQIPGLRKLTEAVHAHGAKIFAQLAHA 100 (327)
T ss_pred CcCCHHHHHHHHHHHHHHHhCCCHhhHHhhCC
Confidence 56888999999999999999999999999994
No 101
>TIGR03471 HpnJ hopanoid biosynthesis associated radical SAM protein HpnJ. One of the well-described hopanoid intermediates is bacteriohopanetetrol. In the conversion from hopene several reactions must occur in the side chain for which a radical mechanism might be reasonable. These include the four (presumably anaerobic) hydroxylations and a methyl shift.
Probab=23.29 E-value=3.5e+02 Score=30.65 Aligned_cols=75 Identities=24% Similarity=0.388 Sum_probs=48.0
Q ss_pred HHHHHHHHhcCCCeEEeccc-cc-cccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccccCCC
Q 006261 196 DIELKLAKDTGVSVFRLGID-WS-RIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGW 273 (653)
Q Consensus 196 ~eDI~LmkelGv~~yRfSIs-Ws-RI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~~GGW 273 (653)
++.+++|++.|++.+-++|+ -+ +++-. ..-..+ ++.+.+.+..|+++||.+.+++. +++| +
T Consensus 287 ~e~l~~l~~aG~~~v~iGiES~s~~~L~~-----~~K~~~---~~~~~~~i~~~~~~Gi~v~~~~I-iGlP--------g 349 (472)
T TIGR03471 287 YETLKVMKENGLRLLLVGYESGDQQILKN-----IKKGLT---VEIARRFTRDCHKLGIKVHGTFI-LGLP--------G 349 (472)
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCHHHHHH-----hcCCCC---HHHHHHHHHHHHHCCCeEEEEEE-EeCC--------C
Confidence 68899999999998888883 22 22211 001122 45577899999999999888775 3556 2
Q ss_pred CChhhHHHHHHHHH
Q 006261 274 KLEKTIDYFMDFTR 287 (653)
Q Consensus 274 ~n~e~vd~Fa~YA~ 287 (653)
++.+.+..-.+|+.
T Consensus 350 et~e~~~~ti~~~~ 363 (472)
T TIGR03471 350 ETRETIRKTIDFAK 363 (472)
T ss_pred CCHHHHHHHHHHHH
Confidence 34444444444443
No 102
>PF04646 DUF604: Protein of unknown function, DUF604; InterPro: IPR006740 This family includes a conserved region found in several uncharacterised plant proteins.
Probab=23.22 E-value=54 Score=34.79 Aligned_cols=76 Identities=5% Similarity=-0.051 Sum_probs=42.0
Q ss_pred HHHHHHHcCCeEEEEeccCCCCccccccCCCCChhhHHHHHHHHHHHHHHhcCccceEEEccCcceeeeccccCCCCC
Q 006261 243 IINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVFCMLTYCAGTWP 320 (653)
Q Consensus 243 LId~L~~~GIePiVTL~HwDLP~wL~~~GGW~n~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v~~~~GY~~G~~P 320 (653)
..--+-++.+.|+|+|||||.=..+. -+....+.++++..=|++--.++..+--.|-.-+...+.+-+||..-.++
T Consensus 73 ~~G~~~a~~~~pl~SlHH~~~~~Pif--P~~~~~~al~~L~~a~~~d~~~~lqqsicyd~~~~wsvsVSwGYsVqvy~ 148 (255)
T PF04646_consen 73 PSGFLEAHPLAPLVSLHHWDSVDPIF--PNMSRLQALRHLLKAAKVDPARILQQSICYDRRRNWSVSVSWGYSVQVYR 148 (255)
T ss_pred cceeeecCCCCceeeeeehhhccccC--CCCCHHHHHHHHHHHHhhChHhhhheeeeccCceEEEEEEEccEEEEEEC
Confidence 33334456689999999999733333 35556677777777444433333222111111122234556799876665
No 103
>TIGR01232 lacD tagatose 1,6-diphosphate aldolase. This family consists of Gram-positive proteins. Tagatose 1,6-diphosphate aldolase is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation.
Probab=23.17 E-value=3.6e+02 Score=29.73 Aligned_cols=60 Identities=12% Similarity=0.137 Sum_probs=50.6
Q ss_pred HHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCc
Q 006261 198 ELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPA 265 (653)
Q Consensus 198 DI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~ 265 (653)
+++.+|++|.++..|=+=|. |++ .-.+|..-.+|-+++.++|+++||-=++-+.-+|.+.
T Consensus 111 s~~rike~GadavK~Llyy~---pD~-----~~ein~~k~a~vervg~ec~a~dipf~lE~ltYd~~~ 170 (325)
T TIGR01232 111 SAKRLKEQGANAVKFLLYYD---VDD-----AEEINIQKKAYIERIGSECVAEDIPFFLEVLTYDDNI 170 (325)
T ss_pred cHHHHHHhCCCeEEEEEEeC---CCC-----ChHHHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCCC
Confidence 58999999999999988774 332 2468999999999999999999999999988887664
No 104
>PLN02447 1,4-alpha-glucan-branching enzyme
Probab=22.54 E-value=4.5e+02 Score=32.33 Aligned_cols=60 Identities=23% Similarity=0.293 Sum_probs=37.3
Q ss_pred HHHHHHHHhcCCCeEEecccccccc--CCCC-------CCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEecc
Q 006261 196 DIELKLAKDTGVSVFRLGIDWSRIM--PAEP-------VNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFH 260 (653)
Q Consensus 196 ~eDI~LmkelGv~~yRfSIsWsRI~--P~~~-------~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~H 260 (653)
++-+.-+|+||+++.-+.=-...-. ..|- .+..-|. .+=+++||++|.++||++|+.+.|
T Consensus 254 ~~~L~ylk~LG~t~I~LmPi~e~~~~~~wGY~~~~~fa~~~~~Gt-----p~dlk~LVd~aH~~GI~VilDvV~ 322 (758)
T PLN02447 254 DDVLPRIKALGYNAVQLMAIQEHAYYGSFGYHVTNFFAVSSRSGT-----PEDLKYLIDKAHSLGLRVLMDVVH 322 (758)
T ss_pred HHHHHHHHHcCCCEEEECCccccCCCCCCCcCcccCcccccccCC-----HHHHHHHHHHHHHCCCEEEEEecc
Confidence 3448999999999997653221110 0000 0000122 234688999999999999998764
No 105
>PRK11858 aksA trans-homoaconitate synthase; Reviewed
Probab=22.20 E-value=2.4e+02 Score=31.32 Aligned_cols=81 Identities=16% Similarity=0.231 Sum_probs=57.0
Q ss_pred HHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccccCCCCC
Q 006261 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKL 275 (653)
Q Consensus 196 ~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~~GGW~n 275 (653)
++|++.+.+.|++..+++++-|.+.-... -+.--.+.++-..+.|..+++.|+++.++.- .++
T Consensus 78 ~~di~~a~~~g~~~i~i~~~~Sd~h~~~~----~~~s~~~~l~~~~~~v~~a~~~G~~v~~~~e----------d~~--- 140 (378)
T PRK11858 78 KSDIDASIDCGVDAVHIFIATSDIHIKHK----LKKTREEVLERMVEAVEYAKDHGLYVSFSAE----------DAS--- 140 (378)
T ss_pred HHHHHHHHhCCcCEEEEEEcCCHHHHHHH----hCCCHHHHHHHHHHHHHHHHHCCCeEEEEec----------cCC---
Confidence 88999999999999999998877633210 1222356788889999999999999887632 122
Q ss_pred hhhHHHHHHHHHHHHHHhc
Q 006261 276 EKTIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 276 ~e~vd~Fa~YA~~vf~~fG 294 (653)
+...+...++++.+. ..|
T Consensus 141 r~~~~~l~~~~~~~~-~~G 158 (378)
T PRK11858 141 RTDLDFLIEFAKAAE-EAG 158 (378)
T ss_pred CCCHHHHHHHHHHHH-hCC
Confidence 223566677777654 345
No 106
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=22.18 E-value=1.1e+02 Score=32.40 Aligned_cols=24 Identities=42% Similarity=0.829 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHhCCCCCCEEEeecCCCC
Q 006261 444 GLFRVLHQFHERYKHLNLPFIITENGVSD 472 (653)
Q Consensus 444 GL~~lL~~i~~rY~~~~~PI~ITENG~ad 472 (653)
||..++.+ .+| +.|++|||.|+-.
T Consensus 185 gl~g~~~k--~~~---g~P~lLTEHGIY~ 208 (268)
T PF11997_consen 185 GLLGALAK--YRY---GRPFLLTEHGIYT 208 (268)
T ss_pred HHHHHHHH--HHh---CCCEEEecCCccH
Confidence 56555543 356 4899999999953
No 107
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit. This model describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea. The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.
Probab=22.03 E-value=3.4e+02 Score=32.16 Aligned_cols=69 Identities=17% Similarity=0.275 Sum_probs=52.4
Q ss_pred HHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccccCCCCC
Q 006261 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKL 275 (653)
Q Consensus 196 ~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~~GGW~n 275 (653)
++|++.+.+.|++.+|+..+.+.+ +--...|+..+++|+...+++.+-+.|.
T Consensus 94 ~~~v~~a~~~Gvd~irif~~lnd~------------------~n~~~~i~~ak~~G~~v~~~i~~t~~p~---------- 145 (582)
T TIGR01108 94 ERFVKKAVENGMDVFRIFDALNDP------------------RNLQAAIQAAKKHGAHAQGTISYTTSPV---------- 145 (582)
T ss_pred HHHHHHHHHCCCCEEEEEEecCcH------------------HHHHHHHHHHHHcCCEEEEEEEeccCCC----------
Confidence 557899999999999999776543 1135678899999999999987766662
Q ss_pred hhhHHHHHHHHHHHHHHhc
Q 006261 276 EKTIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 276 ~e~vd~Fa~YA~~vf~~fG 294 (653)
...+++.+.++.+.+ .|
T Consensus 146 -~~~~~~~~~~~~~~~-~G 162 (582)
T TIGR01108 146 -HTLETYLDLAEELLE-MG 162 (582)
T ss_pred -CCHHHHHHHHHHHHH-cC
Confidence 356788888887664 44
No 108
>PF03659 Glyco_hydro_71: Glycosyl hydrolase family 71 ; InterPro: IPR005197 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,3-glucanases belonging to glycoside hydrolase family 71 (GH71 from CAZY).
Probab=21.70 E-value=2.3e+02 Score=31.70 Aligned_cols=51 Identities=18% Similarity=0.372 Sum_probs=37.1
Q ss_pred CChHHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEe
Q 006261 193 SDPDIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTL 258 (653)
Q Consensus 193 ~~~~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL 258 (653)
.+|++||+++++.|++.|=+.|- . + ...+. +.-..+.+...+.|.+.++.+
T Consensus 17 ~dw~~di~~A~~~GIDgFaLNig--~--~--------d~~~~---~~l~~a~~AA~~~gFKlf~Sf 67 (386)
T PF03659_consen 17 EDWEADIRLAQAAGIDGFALNIG--S--S--------DSWQP---DQLADAYQAAEAVGFKLFFSF 67 (386)
T ss_pred HHHHHHHHHHHHcCCCEEEEecc--c--C--------CcccH---HHHHHHHHHHHhcCCEEEEEe
Confidence 46789999999999999988885 1 1 12343 334568888889997766554
No 109
>PF12891 Glyco_hydro_44: Glycoside hydrolase family 44; InterPro: IPR024745 This is a family of putative bacterial glycoside hydrolases.; PDB: 3IK2_A 3ZQ9_A 2YJQ_B 2YKK_A 2YIH_A 2EEX_A 2EQD_A 2E0P_A 2E4T_A 2EO7_A ....
Probab=21.55 E-value=2.4e+02 Score=29.82 Aligned_cols=72 Identities=22% Similarity=0.343 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHcCCeEEEEecc--------------CCCCcc--cc---------------cc-CC---CCChhh---H
Q 006261 238 ERYKWIINRVRSYGMKVMLTLFH--------------HSLPAW--AG---------------EY-GG---WKLEKT---I 279 (653)
Q Consensus 238 d~Y~~LId~L~~~GIePiVTL~H--------------wDLP~w--L~---------------~~-GG---W~n~e~---v 279 (653)
+.++.+|+.-+++|.++|+||== ...|.+ -. .. |+ ..+|++ .
T Consensus 24 ~~~~~f~~~~~~~ga~~m~T~pm~G~Vakd~~~~~~~~~fp~~~y~~Q~~~d~~~~~~Gng~~~~~~~~~~~~P~~~~~~ 103 (239)
T PF12891_consen 24 DVADTFIDQNLAAGAYSMMTLPMIGYVAKDANSVSESESFPSWRYGPQQWFDPWNPDCGNGVKPDKTALTSNDPDTPDNP 103 (239)
T ss_dssp HHHHHHHHHHHHTT-EEEEEE--SSEEES-BSEGBGGGTSSSTTEEEBS-EETTEEEEE-SEESTSSS--SSSGGSSSSE
T ss_pred HHHHHHHHHhhhcCcceeEeecccceEecCCCCcccccCCChhhcccccccCcCcCCCCccccCCCCCCCCCCCCCCccH
Confidence 56789999999999999999831 111221 01 00 11 113431 1
Q ss_pred HHHHHHHHHHHHHhcCc-----cceEEEccCccee
Q 006261 280 DYFMDFTRLVVDSVSDI-----VDYWVTFNEPHVF 309 (653)
Q Consensus 280 d~Fa~YA~~vf~~fGDr-----Vk~WiT~NEP~v~ 309 (653)
.+-.+++..+..+||.. |++|..=|||.+.
T Consensus 104 ~y~~ewV~~l~~~~g~a~~~~gvk~y~lDNEP~LW 138 (239)
T PF12891_consen 104 VYMDEWVNYLVNKYGNASTNGGVKYYSLDNEPDLW 138 (239)
T ss_dssp EEHHHHHHHHHHHH--TTSTTS--EEEESS-GGGH
T ss_pred hHHHHHHHHHHHHHhccccCCCceEEEecCchHhh
Confidence 23445566777777776 9999999999864
No 110
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins. The endo-beta-N-acetylglucosaminidases have a glycosyl hydrolase family 18 (GH18) catalytic domain. Some members also have an additional C-terminal glycosyl hydrolase family 20 (GH20) domain while others have an N-terminal domain of unknown function (pfam08522). Members of this family include endo-beta-N-acetylglucosaminidase S (EndoS) from Streptococcus pyogenes, EndoF1, EndoF2, EndoF3, and EndoH from Flavobacterium meningosepticum, and EndoE from Enterococcus faecalis. EndoS is a secreted endoglycosidase from Streptococcus pyogenes that specifically hydrolyzes the glycan on human IgG between two core N-acetylglucosamine residues. EndoE is a secreted endoglycosidase, encoded by the ndoE gene in Enterococcus faecalis, that hydrolyzes the glycan on human RNase B.
Probab=21.43 E-value=3e+02 Score=28.26 Aligned_cols=56 Identities=18% Similarity=0.147 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEeccCCCCccccccCCCCChhhHHHHHHHHHHHHHHhc
Q 006261 236 ALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKLEKTIDYFMDFTRLVVDSVS 294 (653)
Q Consensus 236 GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~~GGW~n~e~vd~Fa~YA~~vf~~fG 294 (653)
.++...+.|..|+++|++.++++.-++....+ ....+++..+.|++-...++++||
T Consensus 49 ~~~~~~~~i~~l~~kG~KVl~sigg~~~~~~~---~~~~~~~~~~~fa~~l~~~v~~yg 104 (255)
T cd06542 49 LLTNKETYIRPLQAKGTKVLLSILGNHLGAGF---ANNLSDAAAKAYAKAIVDTVDKYG 104 (255)
T ss_pred hhHHHHHHHHHHhhCCCEEEEEECCCCCCCCc---cccCCHHHHHHHHHHHHHHHHHhC
Confidence 45667789999999999999999866654322 012344444555554444455554
No 111
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=20.50 E-value=2.7e+02 Score=29.59 Aligned_cols=76 Identities=16% Similarity=0.245 Sum_probs=45.9
Q ss_pred CChHHHHHHHHHHHHHHHcCCeEEEEeccCC-C-Ccc-----ccc------------cCCCCChhhHHHHHHHHHHHHHH
Q 006261 232 VNFAALERYKWIINRVRSYGMKVMLTLFHHS-L-PAW-----AGE------------YGGWKLEKTIDYFMDFTRLVVDS 292 (653)
Q Consensus 232 vN~~GLd~Y~~LId~L~~~GIePiVTL~HwD-L-P~w-----L~~------------~GGW~n~e~vd~Fa~YA~~vf~~ 292 (653)
+|++-..-...||++|+++|++.++-++-.. . |.. +.+ ..-++||+..++|.+-....+..
T Consensus 68 ~d~~~FPdp~~mi~~Lh~~G~k~v~~v~P~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~D~tnp~a~~~w~~~~~~~~~~ 147 (292)
T cd06595 68 WNRKLFPDPEKLLQDLHDRGLKVTLNLHPADGIRAHEDQYPEMAKALGVDPATEGPILFDLTNPKFMDAYFDNVHRPLEK 147 (292)
T ss_pred EChhcCCCHHHHHHHHHHCCCEEEEEeCCCcccCCCcHHHHHHHHhcCCCcccCCeEEecCCCHHHHHHHHHHHHHHHHh
Confidence 3433333356899999999999888775331 1 110 110 11367888777765544444444
Q ss_pred hcCccc-eEEEccCccee
Q 006261 293 VSDIVD-YWVTFNEPHVF 309 (653)
Q Consensus 293 fGDrVk-~WiT~NEP~v~ 309 (653)
.| |+ .|+=+|||..+
T Consensus 148 ~G--idg~W~D~~E~~~~ 163 (292)
T cd06595 148 QG--VDFWWLDWQQGNRT 163 (292)
T ss_pred cC--CcEEEecCCCCccc
Confidence 44 44 78899999765
No 112
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of
Probab=20.48 E-value=3.4e+02 Score=29.58 Aligned_cols=107 Identities=16% Similarity=0.213 Sum_probs=65.1
Q ss_pred hHHHHHHHHhcCCCe--EEeccccccccCCCCCCCCCCcCChHHHHHH--HHHHHHHHHcCCeEEEEeccCCCCc-----
Q 006261 195 PDIELKLAKDTGVSV--FRLGIDWSRIMPAEPVNGLKETVNFAALERY--KWIINRVRSYGMKVMLTLFHHSLPA----- 265 (653)
Q Consensus 195 ~~eDI~LmkelGv~~--yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y--~~LId~L~~~GIePiVTL~HwDLP~----- 265 (653)
.++-++.+++.|+.. +=+.+.|..-. + .=++|.+-.--- +++|++|+++|++.++.+.-+-.+.
T Consensus 26 v~~~~~~~r~~~iP~d~i~lD~~~~~~~--~-----~f~~d~~~FPdp~~~~mi~~L~~~G~k~~~~i~P~v~~~~~~~~ 98 (339)
T cd06602 26 VKEVVENMRAAGIPLDVQWNDIDYMDRR--R-----DFTLDPVRFPGLKMPEFVDELHANGQHYVPILDPAISANEPTGS 98 (339)
T ss_pred HHHHHHHHHHhCCCcceEEECcccccCc--c-----ceecccccCCCccHHHHHHHHHHCCCEEEEEEeCccccCcCCCC
Confidence 345667777777654 44555564221 0 012222211112 6899999999999999887654442
Q ss_pred c--cc---c--------------------cC---CCCChhhHHHHHHHHHHHHHHhcCccceEEEccCccee
Q 006261 266 W--AG---E--------------------YG---GWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVF 309 (653)
Q Consensus 266 w--L~---~--------------------~G---GW~n~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v~ 309 (653)
. ++ + .+ -++|++..++|.+.-+.++..+|- --+|+=+|||..+
T Consensus 99 ~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gv-dg~w~D~~Ep~~~ 169 (339)
T cd06602 99 YPPYDRGLEMDVFIKNDDGSPYIGKVWPGYTVFPDFLNPNTQEWWTDEIKDFHDQVPF-DGLWIDMNEPSNF 169 (339)
T ss_pred CHHHHHHHHCCeEEECCCCCEEEEEeCCCCCcCcCCCCHHHHHHHHHHHHHHHhcCCC-cEEEecCCCCchH
Confidence 0 00 0 01 367899999998877777766553 3568889999643
No 113
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=20.31 E-value=2.7e+02 Score=29.99 Aligned_cols=111 Identities=15% Similarity=0.207 Sum_probs=63.2
Q ss_pred HHHHHHHHhcCC--CeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccC---CCCcc----
Q 006261 196 DIELKLAKDTGV--SVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHH---SLPAW---- 266 (653)
Q Consensus 196 ~eDI~LmkelGv--~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~Hw---DLP~w---- 266 (653)
.+-++-+++.|+ +++=+.+.|.-.......-| .=++|.+-.---+++|+.|+++||+.++.+.-+ +.|..
T Consensus 27 ~~~~~~~~~~~iP~d~i~lD~~w~~~~~~~~~~~-~f~wd~~~FPdp~~mi~~L~~~G~k~~~~v~P~v~~~~~~y~e~~ 105 (317)
T cd06598 27 DDTIKTLREKDFPLDAAILDLYWFGKDIDKGHMG-NLDWDRKAFPDPAGMIADLAKKGVKTIVITEPFVLKNSKNWGEAV 105 (317)
T ss_pred HHHHHHHHHhCCCceEEEEechhhcCcccCCcee-eeEeccccCCCHHHHHHHHHHcCCcEEEEEcCcccCCchhHHHHH
Confidence 445566666665 45555556743222100000 012232222224679999999999999988755 33331
Q ss_pred -----ccc--------------cC---CCCChhhHHHHHHHHHHHHHHhcCccceEEEccCccee
Q 006261 267 -----AGE--------------YG---GWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVF 309 (653)
Q Consensus 267 -----L~~--------------~G---GW~n~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v~ 309 (653)
+.+ .+ -++|++..++|.+..+.+ ...|- --+|+=+|||.++
T Consensus 106 ~~g~l~~~~~~~~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~-~~~Gv-dg~w~D~~Ep~~~ 168 (317)
T cd06598 106 KAGALLKKDQGGVPTLFDFWFGNTGLIDWFDPAAQAWFHDNYKKL-IDQGV-TGWWGDLGEPEVH 168 (317)
T ss_pred hCCCEEEECCCCCEeeeeccCCCccccCCCCHHHHHHHHHHHHHh-hhCCc-cEEEecCCCcccc
Confidence 100 01 356999999998877665 33442 2358899999754
No 114
>PRK08195 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated
Probab=20.08 E-value=4e+02 Score=29.20 Aligned_cols=68 Identities=22% Similarity=0.209 Sum_probs=51.0
Q ss_pred HHHHHHHHhcCCCeEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCCccccccCCCCC
Q 006261 196 DIELKLAKDTGVSVFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLPAWAGEYGGWKL 275 (653)
Q Consensus 196 ~eDI~LmkelGv~~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP~wL~~~GGW~n 275 (653)
.+|++.+.+.|++.+|+...+++.. --.+.|+.+++.|++..++|..- .
T Consensus 91 ~~dl~~a~~~gvd~iri~~~~~e~~------------------~~~~~i~~ak~~G~~v~~~l~~a-------------~ 139 (337)
T PRK08195 91 VDDLKMAYDAGVRVVRVATHCTEAD------------------VSEQHIGLARELGMDTVGFLMMS-------------H 139 (337)
T ss_pred HHHHHHHHHcCCCEEEEEEecchHH------------------HHHHHHHHHHHCCCeEEEEEEec-------------c
Confidence 5899999999999999988665431 12578999999999999988642 1
Q ss_pred hhhHHHHHHHHHHHHHHhcC
Q 006261 276 EKTIDYFMDFTRLVVDSVSD 295 (653)
Q Consensus 276 ~e~vd~Fa~YA~~vf~~fGD 295 (653)
...++.+.+.++.+. .+|-
T Consensus 140 ~~~~e~l~~~a~~~~-~~Ga 158 (337)
T PRK08195 140 MAPPEKLAEQAKLME-SYGA 158 (337)
T ss_pred CCCHHHHHHHHHHHH-hCCC
Confidence 234577788888764 5663
No 115
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do
Probab=20.05 E-value=3.8e+02 Score=28.85 Aligned_cols=106 Identities=15% Similarity=0.157 Sum_probs=63.4
Q ss_pred HHHHHHHHhcCCC--eEEeccccccccCCCCCCCCCCcCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCC-----ccc-
Q 006261 196 DIELKLAKDTGVS--VFRLGIDWSRIMPAEPVNGLKETVNFAALERYKWIINRVRSYGMKVMLTLFHHSLP-----AWA- 267 (653)
Q Consensus 196 ~eDI~LmkelGv~--~yRfSIsWsRI~P~~~~~G~~G~vN~~GLd~Y~~LId~L~~~GIePiVTL~HwDLP-----~wL- 267 (653)
.+-++.+++.++. ++=+.+.|..-. + .=.+|.+-.---..+|+.|+++|++.++.+.-+-.+ ...
T Consensus 27 ~~~~~~~~~~~iP~d~i~lD~~~~~~~--~-----~f~~d~~~FPdp~~~i~~l~~~g~k~~~~~~P~i~~~~~~~~~~~ 99 (317)
T cd06600 27 VEVVDIMQKEGFPYDVVFLDIHYMDSY--R-----LFTWDPYRFPEPKKLIDELHKRNVKLVTIVDPGIRVDQNYSPFLS 99 (317)
T ss_pred HHHHHHHHHcCCCcceEEEChhhhCCC--C-----ceeechhcCCCHHHHHHHHHHCCCEEEEEeeccccCCCCChHHHH
Confidence 4555666666654 444455554211 0 112333322234579999999999988776543221 110
Q ss_pred -c-------c-----------cC-----CCCChhhHHHHHHHHHHHHHHhcCccceEEEccCccee
Q 006261 268 -G-------E-----------YG-----GWKLEKTIDYFMDFTRLVVDSVSDIVDYWVTFNEPHVF 309 (653)
Q Consensus 268 -~-------~-----------~G-----GW~n~e~vd~Fa~YA~~vf~~fGDrVk~WiT~NEP~v~ 309 (653)
. . .| -|+||+..++|.+..+.+....|- .-+|+=+|||..+
T Consensus 100 ~~~~~~~v~~~~g~~~~~~~w~G~~~~~Dftnp~a~~ww~~~~~~~~~~~gv-dg~w~D~~Ep~~~ 164 (317)
T cd06600 100 GMDKGKFCEIESGELFVGKMWPGTTVYPDFTNPDTREWWAGLFSEWLNSQGV-DGIWLDMNEPSDF 164 (317)
T ss_pred HHHCCEEEECCCCCeEEEeecCCCccccCCCChHHHHHHHHHHHHHhhcCCC-ceEEeeCCCCccH
Confidence 0 0 01 367999999998888877665553 3478899999643
Done!