Query 006262
Match_columns 653
No_of_seqs 308 out of 2106
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 20:19:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006262.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006262hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3se6_A Endoplasmic reticulum a 100.0 2E-127 7E-132 1121.6 63.4 624 11-651 64-734 (967)
2 4fke_A Aminopeptidase N; zinc 100.0 9E-125 3E-129 1103.1 56.1 626 8-651 3-666 (909)
3 2xdt_A Endoplasmic reticulum a 100.0 2E-123 6E-128 1089.3 64.2 622 12-651 5-666 (897)
4 1z5h_A Tricorn protease intera 100.0 1E-114 4E-119 1001.1 52.8 572 20-650 1-573 (780)
5 2gtq_A Aminopeptidase N; alani 100.0 3.7E-90 1.3E-94 800.2 53.4 583 10-635 7-631 (867)
6 3ebh_A PFA-M1, M1 family amino 100.0 1E-89 3.6E-94 788.4 50.6 518 17-564 11-560 (889)
7 3b34_A Aminopeptidase N; prote 100.0 1.5E-89 5.3E-94 792.4 49.4 537 8-587 28-595 (891)
8 3cia_A Cold-active aminopeptid 100.0 4E-85 1.4E-89 736.4 21.5 527 13-627 19-561 (605)
9 3u9w_A Leukotriene A-4 hydrola 100.0 3.6E-83 1.2E-87 721.0 31.8 444 14-479 7-474 (608)
10 2xq0_A LTA-4 hydrolase, leukot 100.0 3.5E-82 1.2E-86 714.5 18.5 542 13-642 21-602 (632)
11 3rjo_A Endoplasmic reticulum a 100.0 7.4E-33 2.5E-37 298.8 19.3 177 459-651 1-183 (419)
12 4fgm_A Aminopeptidase N family 100.0 2.2E-28 7.6E-33 271.9 20.5 295 157-461 119-450 (597)
13 1u4g_A Elastase, pseudolysin; 87.4 24 0.00082 34.9 18.7 98 236-344 73-175 (301)
14 1bqb_A Protein (aureolysin); h 80.7 3.5 0.00012 40.9 7.5 104 236-343 67-178 (301)
15 3dnz_A Thermolysin; hydrolase, 78.2 3.5 0.00012 41.1 6.5 102 235-344 69-177 (316)
16 3cqb_A Probable protease HTPX 77.9 2.2 7.5E-05 35.4 4.3 20 301-320 80-99 (107)
17 4ger_A Gentlyase metalloprotea 77.5 3.8 0.00013 40.6 6.5 102 235-344 62-170 (304)
18 2y3u_A Collagenase, collagenas 76.2 1.1 3.7E-05 50.6 2.4 38 305-342 423-469 (785)
19 2vqx_A Metalloproteinase; ther 75.9 18 0.00062 36.4 11.1 106 235-345 89-198 (341)
20 1r55_A ADAM 33; metalloproteas 49.5 24 0.00082 32.9 5.9 14 303-316 135-148 (214)
21 3c37_A Peptidase, M48 family; 49.2 16 0.00055 35.2 4.7 20 301-320 97-116 (253)
22 1yp1_A FII; FII hydrolase; 1.9 46.9 39 0.0013 31.1 6.9 13 304-316 135-147 (202)
23 2w15_A Zinc metalloproteinase 46.2 48 0.0016 30.4 7.4 14 303-316 135-148 (202)
24 1bud_A Protein (acutolysin A); 45.6 45 0.0015 30.5 7.1 13 304-316 133-145 (197)
25 3nqx_A MCP-02, secreted metall 44.8 2.4E+02 0.0081 27.8 20.2 99 236-344 74-176 (306)
26 2ero_A VAP-1, vascular apoptos 40.2 56 0.0019 34.1 7.5 14 303-316 145-158 (427)
27 1atl_A Atrolysin C; metalloend 37.7 41 0.0014 31.0 5.4 13 304-316 136-148 (202)
28 1qua_A Acutolysin-C, hemorrhag 37.1 42 0.0014 30.8 5.3 13 304-316 135-147 (197)
29 2ejq_A Hypothetical protein TT 36.9 14 0.00048 31.7 1.8 28 300-328 85-112 (130)
30 1kuf_A Atrolysin E, metallopro 34.7 44 0.0015 30.8 5.1 14 303-316 137-150 (203)
31 3k7n_A K-like; SVMP, hydrolase 34.1 84 0.0029 32.4 7.6 14 303-316 138-151 (397)
32 2c9r_A COPC, copper resistance 33.1 97 0.0033 25.0 6.3 22 88-110 64-85 (102)
33 2e3x_A Coagulation factor X-ac 32.0 39 0.0013 35.3 4.7 14 303-316 138-151 (427)
34 2dw0_A Catrocollastatin; apopt 30.6 52 0.0018 34.2 5.3 14 303-316 136-149 (419)
35 1lyq_A PCOC copper resistance 29.4 1E+02 0.0035 24.9 5.9 22 88-110 66-87 (104)
36 4fca_A Conserved domain protei 29.2 47 0.0016 35.7 4.7 56 399-454 318-378 (525)
37 3k7l_A Atragin; SVMP, metallop 28.6 84 0.0029 32.7 6.5 14 303-316 143-156 (422)
38 2rjq_A Adamts-5; metalloprotea 28.1 1.3E+02 0.0043 30.7 7.7 13 304-316 143-155 (378)
39 3b8z_A Protein adamts-5; alpha 25.0 1.6E+02 0.0053 27.2 7.2 13 304-316 141-153 (217)
40 3dte_A IRRE protein; radiotole 23.7 74 0.0025 31.4 4.7 31 437-467 165-195 (301)
41 4dd8_A Disintegrin and metallo 23.6 1.5E+02 0.005 27.2 6.6 14 303-316 132-145 (208)
42 2v4b_A Adamts-1; zymogen, prot 23.6 81 0.0028 31.0 5.1 13 304-316 143-155 (300)
43 3g5c_A ADAM 22; alpha/beta fol 22.9 1.5E+02 0.005 31.7 7.2 14 303-316 133-146 (510)
44 3o0y_A Lipoprotein; structural 22.3 3.9E+02 0.013 29.1 10.5 105 241-347 365-485 (609)
45 2rjp_A Adamts-4; metalloprotea 21.6 1.4E+02 0.0047 29.5 6.4 14 303-316 142-155 (316)
46 2ddf_A ADAM 17; hydrolase; HET 21.1 42 0.0014 32.2 2.3 13 304-316 182-194 (257)
No 1
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*
Probab=100.00 E-value=2e-127 Score=1121.61 Aligned_cols=624 Identities=34% Similarity=0.598 Sum_probs=567.3
Q ss_pred cCCCCCCCCceeeEEEEEEEEccCCceEEEEEEEEEEEecccCEEEEEecCceeEEEEEEecCCc-----cccccceeec
Q 006262 11 KSQARLPKFAIPSYYDLYIKLDLVACTFSGNVNININIIEKTNFIVLNALELNVHEVLFTSSHNQ-----EYRPSDAIMD 85 (653)
Q Consensus 11 ~~~~rLp~~~~p~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~-----~~~~~~~~~~ 85 (653)
-.++|||.+++|.||+|+|++++++.+|+|+|+|++++.++++.|+||+.+|+|.+|.+..+... ........++
T Consensus 64 ~~~~RLP~~v~P~hY~L~L~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~I~~v~v~~~~~~~~~~~~~~~~~~~~~ 143 (967)
T 3se6_A 64 WQELRLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYP 143 (967)
T ss_dssp CCCSSCCTTEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCCSEEEEECSSCEEEEEEEEECC---CCSSCEECEEEEEG
T ss_pred cccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEEEcCCCEEEEECCCCEEEEEEEeccCCcccccccceeeeEEec
Confidence 45789999999999999999999999999999999999999999999999999999998742111 1111122333
Q ss_pred CCCcEEEEEeccCccce-eEEEEEEEEeeecCCCcceEEeeeec-CCeeeeeeecccccCCCCeeeeecCCCCCeeEEEE
Q 006262 86 KDDEILVLVFDEPLAVG-EGILRIIFYGKLNEHTKGFYKCSYVE-KEVKKNMAVTQFEAVDARRCFPCWDEPALKATFKI 163 (653)
Q Consensus 86 ~~~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~y~~~y~~-~g~~~~~~~T~~ep~~Ar~~fPc~DeP~~ka~f~l 163 (653)
.++.+.|.++++|++| .|+|+|.|+|.+++++.|||++.|.+ +|+.+++++|||||.+||+||||||||++||+|+|
T Consensus 144 -~~~~l~i~l~~~L~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~FPC~DeP~~KAtf~i 222 (967)
T 3se6_A 144 -AHEQIALLVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSI 222 (967)
T ss_dssp -GGTEEEEECSSCCCTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTGGGTSCBCCSTTCCBEEEE
T ss_pred -CCCEEEEEcCCccCCCCeEEEEEEEEEecCCCccceeeeeeEcCCCceEEEEEEecccCCCCeEEEecCCcCceeEEEE
Confidence 5678999999999999 89999999999999999999999987 68889999999999999999999999999999999
Q ss_pred EEEeCCCCeEEecCcccce-eecCCEEEEEEEeCCcccceEEEEEEecceeeeecccCCeEEEEEecCCCcchhHHHHHH
Q 006262 164 TLDIPSELTALSNMPILDE-KLNGNLKTVYFEESPVMSTYLVAFVVGLFDHIEDTTTNGVKVHVYCPVGKSSEGKHALDV 242 (653)
Q Consensus 164 ~i~~p~~~~~~sn~~~~~~-~~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~ 242 (653)
+|++|++|+|+|||++.++ ...+++++++|+.|+|||+|++||+||+|+.++..+.+|+++++|++|+..++++++++.
T Consensus 223 tI~~p~~~~alSN~~~~~~~~~~~g~~~~~F~~t~pmstYLva~~vg~f~~~~~~~~~gv~v~v~~~p~~~~~~~~al~~ 302 (967)
T 3se6_A 223 KIRRESRHIALSNMPKVKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQA 302 (967)
T ss_dssp EEEECTTCEEEESSCEEEEEECTTSCEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECGGGGGGGHHHHHH
T ss_pred EEEECCCcEEEeCCCcccceecCCCeEEEEEecCCCccceeEEEEEeceEEEEeecCCCcEEEEEeCcchHHHHHHHHHH
Confidence 9999999999999998765 345678999999999999999999999999988666789999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCcceeecCCCCcccccccccceeecceeeecCCCCCHHHHHHHHHHHHHHHHHHHhcCccC
Q 006262 243 AIKSLGIYTEFFSTPYPLPKLDMVAVSEFHAGAMENFGLIVYRENELLYNEKTSTANRKQIMAISTSHEVAHQWFGNLVT 322 (653)
Q Consensus 243 ~~~~l~~~e~~fg~~yp~~kld~V~~P~~~~game~~Gli~~~e~~ll~~~~~s~~~~~~~~~~~iaHElaHqWfGnlVt 322 (653)
+.+++++||++||+|||++|+|+|++|+|..||||||||++|++..++++++.++...++.++.+||||+|||||||+||
T Consensus 303 ~~~~l~~~e~~fg~~YP~~k~d~v~vPdf~~GaMEn~Glity~e~~ll~d~~~s~~~~k~~~~~vIaHElAHqWFGnlVT 382 (967)
T 3se6_A 303 SLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT 382 (967)
T ss_dssp HHHHHHHHHHHHTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHGGGTBTTTEE
T ss_pred HHHHHHHHHHhcCCCCCcccccEEEecCCCCcccccCCccccchhheecCcccCCHHhhHhHHHHHHHHHHHHHhcCccc
Confidence 99999999999999999999999999999999999999999999999999998888899999999999999999999999
Q ss_pred ccccchhHhhhhHHHHHHHHHHhhhCCchhhHHHHHHHhhhhhccccccCCCCceeecCChhhhhhhcccccchhhhHHH
Q 006262 323 MEWWTHLWLNEGFATWISYMATDIMFPEWKMWTQFLRQTSHGLRLDAQEQSHPIEVEVHRADEIDQVFDAISYNKGSAVI 402 (653)
Q Consensus 323 ~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~p~~~~~~~~~~~~~~f~~i~Y~Kg~~vl 402 (653)
|+||+|+|||||||+|++++++++.+|+|.++..|+.+...++..|+..++||+..++.++.++...|+.++|.||+++|
T Consensus 383 ~~wW~dlWLnEGFAty~e~~~~~~~~p~~~~~~~~~~~~~~al~~D~~~~~~Pi~~~v~~~~~i~~~Fd~i~Y~KGa~vL 462 (967)
T 3se6_A 383 MEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITKDSLNSSRPISKPAETPTQIQEMFDEVSYNKGACIL 462 (967)
T ss_dssp ESSGGGTHHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHHHHHTTTTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHH
T ss_pred cCCCccccHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHhhcccCCCCceeecCCHHHHHHhcchhhhhHHHHHH
Confidence 99999999999999999999999999999988777666567889999999999999999999999999999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHhcccCCCChHHHHHHHHhh---------------------------cCCCHHHHHHHHh
Q 006262 403 RMLQSYLGEDIFQKSLSLYMKKYAWKNVETEDLWSVLSEE---------------------------SGINITSLMECWT 455 (653)
Q Consensus 403 ~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~---------------------------sg~~l~~~~~~W~ 455 (653)
|||+..||++.|+++|+.|+++|+|++++++|||++|+++ +|.++++||++|+
T Consensus 463 ~mL~~~lG~e~F~~gLr~Yl~~~~~~nat~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dv~~~m~~W~ 542 (967)
T 3se6_A 463 NMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWT 542 (967)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHCC-------------------------CCCCCCHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCcCHHHHHHHHh
Confidence 9999999999999999999999999999999999999995 6899999999999
Q ss_pred cCCCcceEEEEEeCCEEEEEEEeeecCCCC---------CCCeeEEEEEEEECCcccceeeEeecceeEEEecCCCCCCC
Q 006262 456 KQKGHPVVYVNCKDNLLEFKQSQFVSSGLQ---------GDGRWTIPITLSLGSYNNQRNFLLESQSQSVDISEMLPSSD 526 (653)
Q Consensus 456 ~~~G~P~l~v~~~~~~i~l~Q~rf~~~~~~---------~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 526 (653)
.|+|||+++|++++++++|+|+||+.++.. .+..|+|||+|.++++.....+|+..++.++.++.
T Consensus 543 ~q~G~Pvl~V~~~~~~~~l~Q~rf~~~~~~~~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~~~~------ 616 (967)
T 3se6_A 543 LQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIHRHILKSKTDTLDLPE------ 616 (967)
T ss_dssp HSCSCEEEEEEEETTEEEEEEEECCCC-----------CCSCCCCCCEEEEESSCCCCEEECCCSSEEEEECSS------
T ss_pred cCCCCcEEEEEecCCEEEEEeeeecCCCCCCccccccccCCceEEEEEEEEeCCCCccceEEecCCceEEeccC------
Confidence 999999999999989999999999875432 23589999999987655445577776666666642
Q ss_pred CccccccccCCCceEEeccCceeEEEEEcCHHHHHHHHHHHHc--CCCChhcHHHHHHHHHHHHHcCCCCHHHHHHHHHh
Q 006262 527 GKLCSFKECDETLWIKVNVEQSGFYRVIYDDELSARLRKAVEN--NCLSAADKLGILDDMLALCQACKQPLSYLLLLLDA 604 (653)
Q Consensus 527 ~~~~~~~~~~~~~wi~~N~~~~gyyrV~Yd~~~w~~l~~~l~~--~~i~~~~ra~li~D~~~l~~~g~l~~~~~l~l~~~ 604 (653)
. ++||++|.++.||||||||+++|++|+++|.. ..||+.||||||+|+|+||++|+++++.+|+|++|
T Consensus 617 ---------~-~~wi~~N~~~~GyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~ 686 (967)
T 3se6_A 617 ---------K-TSWVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYY 686 (967)
T ss_dssp ---------C-CSCEEESGGGCSSCEEEEETTHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHTTG
T ss_pred ---------C-CceEEEeCCccEEEEEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 2 68999999999999999999999999999975 36999999999999999999999999999999999
Q ss_pred hhcCCCHHHHHHHHHHHHHHHHHHhcc-ChhhHHHHHHHHHHhccccc
Q 006262 605 HRKEHDSMVLSKLINVCYDVVEIITDA-MPDAVNELKDFSSVSSNLLL 651 (653)
Q Consensus 605 l~~E~~~~~w~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 651 (653)
|++|++|+||.+++..|.++.+++.+. .++.++.|++|+..++.++.
T Consensus 687 l~~E~~~~~w~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 734 (967)
T 3se6_A 687 LQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVI 734 (967)
T ss_dssp GGTCCCHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHTTHHHH
T ss_pred hcCCCcHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998743 24678999999999887764
No 2
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=100.00 E-value=9e-125 Score=1103.09 Aligned_cols=626 Identities=31% Similarity=0.569 Sum_probs=555.6
Q ss_pred ccccCCCCCCCCceeeEEEEEEEEccCC-----ceEEEEEEEEEEEecccCEEEEEecCceeEEE----EEEe-cCCccc
Q 006262 8 NQFKSQARLPKFAIPSYYDLYIKLDLVA-----CTFSGNVNININIIEKTNFIVLNALELNVHEV----LFTS-SHNQEY 77 (653)
Q Consensus 8 ~~~~~~~rLp~~~~p~~Y~l~l~~d~~~-----~~f~G~v~I~~~~~~~~~~i~L~~~~l~i~~v----~~~~-~~~~~~ 77 (653)
++.-++||||.+++|.||+|+|+++++. .+|+|+|+|++++.++++.|+||+.+|+|..+ .+.. +.....
T Consensus 3 ~~P~~~yRLP~~v~P~hY~l~L~~~l~~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~i~~~~~~~~~~~~~~~~~~ 82 (909)
T 4fke_A 3 SKPWNRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFLCQEPTDVIIIHSKKLNYTTQGHMVVLRGVGDSQVP 82 (909)
T ss_dssp CCGGGSSSCCSSEEEEEEEEEEEECCSCCSSSCCEEEEEEEEEEEESSCEEEEEEECCSCEECCSSSSCEEEESTTCCCC
T ss_pred CCCcccccCcCCCEeEEEEEEEEEcCcCCCCCCceEEEEEEEEEEEecCCCEEEEEcCCCEEEeeeeEEEEecCCCccee
Confidence 3445689999999999999999998653 58999999999999999999999999999753 3332 222233
Q ss_pred cccceeecCCCcEEEEEeccCccce-eEEEEEEEEeeecCCCcceEEeeeecCCeeeeeeecccccCCCCeeeeecCCCC
Q 006262 78 RPSDAIMDKDDEILVLVFDEPLAVG-EGILRIIFYGKLNEHTKGFYKCSYVEKEVKKNMAVTQFEAVDARRCFPCWDEPA 156 (653)
Q Consensus 78 ~~~~~~~~~~~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~y~~~y~~~g~~~~~~~T~~ep~~Ar~~fPc~DeP~ 156 (653)
......++...+.++|.++++|++| .|+|+|.|+|++++++.|||++.|.++|..+++++|||||.+||+||||||||+
T Consensus 83 ~~~~~~~~~~~~~l~i~l~~~l~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~~~~~~~~Tqfep~~AR~~FPc~DeP~ 162 (909)
T 4fke_A 83 EIDRTELVELTEYLVVHLKGSLQPGHMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPA 162 (909)
T ss_dssp CEEEEEEETTTTEEEEEEEEEECTTCEEEEEEEEEEECCSSSSEEEEEEEEETTEEEEEEEEECTTTTGGGTSCBCCSTT
T ss_pred cccceEEecCCcEEEEEcCCCcCCCCEEEEEEEEEEEECCCCeEEEEeeEEECCceEEEEEEcCcccCcCEEEEeCCccc
Confidence 4456678888999999999999999 899999999999999999999999988888999999999999999999999999
Q ss_pred CeeEEEEEEEeCCCCeEEecCccccee----ecCCEEEEEEEeCCcccceEEEEEEecceeeeecccCCeEEEEEecCCC
Q 006262 157 LKATFKITLDIPSELTALSNMPILDEK----LNGNLKTVYFEESPVMSTYLVAFVVGLFDHIEDTTTNGVKVHVYCPVGK 232 (653)
Q Consensus 157 ~ka~f~l~i~~p~~~~~~sn~~~~~~~----~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~ 232 (653)
+||+|+|+|++|++|+|+|||++..+. .++++++++|+++||||+|++||+||+|..++..+.+|+++++|++|+.
T Consensus 163 ~KAtf~i~i~~p~~~~alSN~~~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~g~~~~v~~~p~~ 242 (909)
T 4fke_A 163 MKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPNWSVTEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNA 242 (909)
T ss_dssp SCBEEEEEEEEETTSEEEESSCBSSSCEECTTCTTEEEEEBCCCCSBCGGGCCEEEESCEEEEEECTTSCEEEEEECHHH
T ss_pred cceEEEEEEEECCCCEEEcCCcccccccceecCCCeEEEEEecCCCccceeeEEEecceEEEeeccCCCcEEEEEEecch
Confidence 999999999999999999999987652 2467999999999999999999999999998877788999999999986
Q ss_pred cc--hhHHHHHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCcccccccccceeecceeeecCCCCCHHHHHHHHHHHHH
Q 006262 233 SS--EGKHALDVAIKSLGIYTEFFSTPYPLPKLDMVAVSEFHAGAMENFGLIVYRENELLYNEKTSTANRKQIMAISTSH 310 (653)
Q Consensus 233 ~~--~~~~~l~~~~~~l~~~e~~fg~~yp~~kld~V~~P~~~~game~~Gli~~~e~~ll~~~~~s~~~~~~~~~~~iaH 310 (653)
.+ +++++++.+.+++++||++||+|||++|+|+|++|+|..|||||||||+|++..+|++++.++...++.++.+|||
T Consensus 243 ~~~~~~~~al~~~~~~l~~~e~~~~~~Yp~~k~d~v~vpdf~~gaMEn~glit~~e~~ll~d~~~s~~~~~~~~~~viaH 322 (909)
T 4fke_A 243 IAEGHGMYALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAH 322 (909)
T ss_dssp HHTTTTHHHHHHHHHHHHHHHHHTTSCCSSSEEEEEEETTCTTCEECCTTEEEEEHHHHCCCTTTCCHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcccEEEecCCCCcccccCcccccccceeecCcccCChHHHHHHHHHHHH
Confidence 54 5679999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCccCccccchhHhhhhHHHHHHHHHHhhhCCchhhHHHHHHHhh-hhhccccccCCCCceee---cCChhhh
Q 006262 311 EVAHQWFGNLVTMEWWTHLWLNEGFATWISYMATDIMFPEWKMWTQFLRQTS-HGLRLDAQEQSHPIEVE---VHRADEI 386 (653)
Q Consensus 311 ElaHqWfGnlVt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~p~~~~---~~~~~~~ 386 (653)
|+|||||||+|||+||+|+|||||||+|++++++++.+|+|.++..|..... .++..|+..++||+..+ +.++.++
T Consensus 323 ElAHqWFGnlVT~~~W~dlWLnEGFAty~e~~~~~~~~~~~~~~~~f~~~~~~~~~~~d~~~~~~pi~~~~~~v~~~~~i 402 (909)
T 4fke_A 323 ELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEVNTPAQI 402 (909)
T ss_dssp HHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHSTTSCGGGGHHHHTHHHHHHHHTSTTCCCSCCCGGGCCSHHHH
T ss_pred HHHhhhhcCeecccccCcceeehHHHHHHHHHHHHhccccccHHHhhhhhHHHHHHHHhhhcccCCccccccccCChhhH
Confidence 9999999999999999999999999999999999999999999988877655 67889999999999875 6788899
Q ss_pred hhhcccccchhhhHHHHHHHHhhCHHHHHHHHHHHHHhcccCCCChHHHHHHHHhhcCC--------CHHHHHHHHhcCC
Q 006262 387 DQVFDAISYNKGSAVIRMLQSYLGEDIFQKSLSLYMKKYAWKNVETEDLWSVLSEESGI--------NITSLMECWTKQK 458 (653)
Q Consensus 387 ~~~f~~i~Y~Kg~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~sg~--------~l~~~~~~W~~~~ 458 (653)
+..|+.++|.||++|||||+..||++.|+++|+.|+++|+|++++++|||++|++++|. ++++||++|+.|+
T Consensus 403 ~~~fd~i~Y~KGa~vL~mL~~~lG~e~F~~gl~~Yl~~~~~~na~~~Dl~~~l~~~s~~~~~~~~~~~v~~~~~~W~~q~ 482 (909)
T 4fke_A 403 SEMFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQM 482 (909)
T ss_dssp HTTSSHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHHHTCSSCCCSSCHHHHHHHHHSSC
T ss_pred HhhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcccccccchhHHhHhhCccccC
Confidence 99999999999999999999999999999999999999999999999999999999874 5999999999999
Q ss_pred CcceEEEEEeCCEEEEEEEeeecCCCC-------CCCeeEEEEEEEECCcccceeeEeecceeEEEecCCCCCCCCcccc
Q 006262 459 GHPVVYVNCKDNLLEFKQSQFVSSGLQ-------GDGRWTIPITLSLGSYNNQRNFLLESQSQSVDISEMLPSSDGKLCS 531 (653)
Q Consensus 459 G~P~l~v~~~~~~i~l~Q~rf~~~~~~-------~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 531 (653)
|||+|+|+++.+. ++|+||+..... .+..|+|||++.+........++.........+..
T Consensus 483 G~Pvv~V~~~~~~--~~q~~~~~~~~~~~~~~~~~~~~w~IPl~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 549 (909)
T 4fke_A 483 GFPVITVDTKTGN--ISQKHFLLDSESNVTRSSAFDYLWIVPISSIKNGVMQDHYWLRDVSQAQNDLFK----------- 549 (909)
T ss_dssp SCEEEEEETTTTE--EEEEECCSCTTCCCCSCCTTTTCCCEEECEEETTEECCCEEECSCSEEECGGGC-----------
T ss_pred CCcEEEEEeccCc--EEEEEEEeccCCCCCCCCCCCceEEEEEEEEeCCCccceEEeeccccceeeecc-----------
Confidence 9999999887765 678888764421 12479999999876543322222222222222211
Q ss_pred ccccCCCceEEeccCceeEEEEEcCHHHHHHHHHHHHcC--CCChhcHHHHHHHHHHHHHcCCCCHHHHHHHHHhhhcCC
Q 006262 532 FKECDETLWIKVNVEQSGFYRVIYDDELSARLRKAVENN--CLSAADKLGILDDMLALCQACKQPLSYLLLLLDAHRKEH 609 (653)
Q Consensus 532 ~~~~~~~~wi~~N~~~~gyyrV~Yd~~~w~~l~~~l~~~--~i~~~~ra~li~D~~~l~~~g~l~~~~~l~l~~~l~~E~ 609 (653)
... ++||++|.++.||||||||+++|.+|+++|+.+ .||+.+|+|||+|+|+||++|.++++.+|+++.||++|+
T Consensus 550 --~~~-~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~ag~~~~~~~l~l~~~l~~E~ 626 (909)
T 4fke_A 550 --TAS-DDWVLLNVNVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQVIYDSFNLATAHMVPVTLALDNTLFLNGEK 626 (909)
T ss_dssp --CCT-TCCEEESGGGCSSCEEEECHHHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHTTGGGGGCC
T ss_pred --CCC-CCeEEECCCceEEEEEecCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHccCc
Confidence 112 689999999999999999999999999999864 799999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHhccccc
Q 006262 610 DSMVLSKLINVCYDVVEIITDAMPDAVNELKDFSSVSSNLLL 651 (653)
Q Consensus 610 ~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (653)
+|+||.+++..|.++..++.+ ++.++.|++|+..++.++.
T Consensus 627 ~y~~w~~~~~~l~~l~~~~~~--~~~~~~~~~~~~~l~~~~~ 666 (909)
T 4fke_A 627 EYMPWQAALSSLSYFSLMFDR--SEVYGPMKKYLRKQVEPLF 666 (909)
T ss_dssp SHHHHHHHHHHHHHHHHHHTT--STTHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987 4589999999999887764
No 3
>2xdt_A Endoplasmic reticulum aminopeptidase 1; glycoprotein, metal-binding, metalloprotease, protease, hydrolase, adaptive immunity; HET: NAG; 2.70A {Homo sapiens} PDB: 2yd0_A* 3qnf_A* 3mdj_A*
Probab=100.00 E-value=1.8e-123 Score=1089.34 Aligned_cols=622 Identities=33% Similarity=0.621 Sum_probs=565.5
Q ss_pred CCCCCCCCceeeEEEEEEEEccCCceEEEEEEEEEEEecccCEEEEEecCceeEEEEEEecCCccc--cccceeecCCCc
Q 006262 12 SQARLPKFAIPSYYDLYIKLDLVACTFSGNVNININIIEKTNFIVLNALELNVHEVLFTSSHNQEY--RPSDAIMDKDDE 89 (653)
Q Consensus 12 ~~~rLp~~~~p~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~--~~~~~~~~~~~~ 89 (653)
.++|||..++|.||+|+|++|+++.+|+|+++|++++.++++.|+||+.+|+|.++.+.......+ ....+..+..++
T Consensus 5 ~~~rLp~~~~p~hY~l~L~~d~~~~~f~G~v~I~~~~~~~~~~I~L~~~~l~I~~v~v~~~~~~~~~~~~~~~~~~~~~~ 84 (897)
T 2xdt_A 5 NKIRLPEYVIPVHYDLLIHANLTTLTFWGTTKVEITASQPTSTIILHSHHLQISRATLRKGAGERLSEEPLQVLEHPRQE 84 (897)
T ss_dssp CCSSCCSSEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCEEEEEEECSSCEEEEEEEEEC----CEEEECEEEEETTTT
T ss_pred ccCcCCCCcEeeEEEEEEEEecCCCeEEEEEEEEEEEEcCCCEEEEEeCCCEEEEEEEEecCCcccccccceeEEcCCCc
Confidence 468999999999999999999999999999999999998899999999999999999864211122 223445567788
Q ss_pred EEEEEeccCccce-eEEEEEEEEeeecCCCcceEEeeeec-CCeeeeeeecccccCCCCeeeeecCCCCCeeEEEEEEEe
Q 006262 90 ILVLVFDEPLAVG-EGILRIIFYGKLNEHTKGFYKCSYVE-KEVKKNMAVTQFEAVDARRCFPCWDEPALKATFKITLDI 167 (653)
Q Consensus 90 ~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~y~~~y~~-~g~~~~~~~T~~ep~~Ar~~fPc~DeP~~ka~f~l~i~~ 167 (653)
.++|.++++|++| .++|+|.|+|.++++..|+|++.|.+ +|+.+++++|||||.+||+||||||||++||+|+|+|++
T Consensus 85 ~l~i~l~~~L~~g~~~~L~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~fPc~DeP~~Katf~itI~~ 164 (897)
T 2xdt_A 85 QIALLAPEPLLVGLPYTVVIHYAGNLSETFHGFYKSTYRTKEGELRILASTQFEPTAARMAFPCFDEPAFKASFSIKIRR 164 (897)
T ss_dssp EEEEEEEEEECTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTHHHHSCBCCSTTSCBEEEEEEEE
T ss_pred EEEEEeCCccCCCCEEEEEEEEEEEeCCCCceeEeeeeecCCCceeEEEEecceecccceEEeccCCccccCeEEEEEEE
Confidence 9999999999999 79999999999998899999999975 688889999999999999999999999999999999999
Q ss_pred CCCCeEEecCccccee-ecCCEEEEEEEeCCcccceEEEEEEecceeeeecccCCeEEEEEecCCCcchhHHHHHHHHHH
Q 006262 168 PSELTALSNMPILDEK-LNGNLKTVYFEESPVMSTYLVAFVVGLFDHIEDTTTNGVKVHVYCPVGKSSEGKHALDVAIKS 246 (653)
Q Consensus 168 p~~~~~~sn~~~~~~~-~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~~~~~ 246 (653)
|++|+|+|||++.++. ..+++++++|+.++|||+|++||+||+|..++..+.+|+++++|++|+..+.++++++.+.++
T Consensus 165 p~~~~alSN~~~~~~~~~~~g~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~gv~v~v~~~~~~~~~~~~al~~~~~~ 244 (897)
T 2xdt_A 165 EPRHLAISNMPLVKSVTVAEGLIEDHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKINQADYALDAAVTL 244 (897)
T ss_dssp CTTCEEEESSCEEEEEEEETTEEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECTTTGGGCHHHHHHHHHH
T ss_pred cCCceEecCCCccceEecCCCEEEEEEeCCCccchhheEEEEEcceeeccccCCCeeEEEEcCCChHHHHHHHHHHHHHH
Confidence 9999999999988763 456789999999999999999999999999886567799999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCcceeecCCCCcccccccccceeecceeeecCCCCCHHHHHHHHHHHHHHHHHHHhcCccCcccc
Q 006262 247 LGIYTEFFSTPYPLPKLDMVAVSEFHAGAMENFGLIVYRENELLYNEKTSTANRKQIMAISTSHEVAHQWFGNLVTMEWW 326 (653)
Q Consensus 247 l~~~e~~fg~~yp~~kld~V~~P~~~~game~~Gli~~~e~~ll~~~~~s~~~~~~~~~~~iaHElaHqWfGnlVt~~~w 326 (653)
+++|+++||+|||++|+|+|++|+|..|||||||+++|++..++++++.++...++.++.+||||+|||||||+|||+||
T Consensus 245 l~~~e~~fg~~YP~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~~~~~~~~~~~~~~~viaHElAHqWFGnlVT~~~W 324 (897)
T 2xdt_A 245 LEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVTMEWW 324 (897)
T ss_dssp HHHHHHHTTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTEEESSG
T ss_pred HHHHHHHhCCCCCccceeEEEeCCCcccchhcCCeeEEeeeeEeECCCCCcHHHHHHHHHHHHHHHHHHHcCCEeccCCc
Confidence 99999999999999999999999999999999999999999999999988888999999999999999999999999999
Q ss_pred chhHhhhhHHHHHHHHHHhhhCCchhhHHHHHHHhhhhhccccccCCCCceeecCChhhhhhhcccccchhhhHHHHHHH
Q 006262 327 THLWLNEGFATWISYMATDIMFPEWKMWTQFLRQTSHGLRLDAQEQSHPIEVEVHRADEIDQVFDAISYNKGSAVIRMLQ 406 (653)
Q Consensus 327 ~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~p~~~~~~~~~~~~~~f~~i~Y~Kg~~vl~mL~ 406 (653)
+|+|||||||+|++++++++.+|++.++..|+.....++..|+..++||+..++.++.++...|+.++|.||++|||||+
T Consensus 325 ~dlWLnEGfAty~e~~~~~~~~~~~~~~~~f~~~~~~a~~~D~~~~~~Pi~~~v~~p~~i~~~fd~i~Y~KGa~vl~mL~ 404 (897)
T 2xdt_A 325 NDLWLNEGFAKFMEFVSVSVTHPELKVGDYFFGKCFDAMEVDALNSSHPVSTPVENPAQIREMFDDVSYDKGACILNMLR 404 (897)
T ss_dssp GGTHHHHHHHHHHHHHHHHHHCGGGCGGGGHHHHHHHHHHHHTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHHHHHH
T ss_pred chhhhhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHhhcccCCCCCEEeCCCHHHHHHhcchhhhhhHHHHHHHHH
Confidence 99999999999999999999999999888885555577888999999999999999999999999999999999999999
Q ss_pred HhhCHHHHHHHHHHHHHhcccCCCChHHHHHHHHhh-------------------c--------CCCHHHHHHHHhcCCC
Q 006262 407 SYLGEDIFQKSLSLYMKKYAWKNVETEDLWSVLSEE-------------------S--------GINITSLMECWTKQKG 459 (653)
Q Consensus 407 ~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~-------------------s--------g~~l~~~~~~W~~~~G 459 (653)
..||++.|+++|+.|+++|++++++++|||++|+++ + |.|+++||++|++|+|
T Consensus 405 ~~lG~e~F~~gl~~Yl~~~~~~~a~~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~g~dl~~~~~~W~~q~G 484 (897)
T 2xdt_A 405 EYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASICPTDGVKGMDGFCSRSQHSSSSSHWHQEGVDVKTMMNTWTLQKG 484 (897)
T ss_dssp HHSCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHTC----------------------------CCCHHHHHHHHHSSCS
T ss_pred HHhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCCCHHHHHHHhhcCCC
Confidence 999999999999999999999999999999999995 6 8999999999999999
Q ss_pred cceEEEEEeCCEEEEEEEeeecCCCC---CCCeeEEEEEEEECCcccceeeEeecceeEEEecCCCCCCCCccccccccC
Q 006262 460 HPVVYVNCKDNLLEFKQSQFVSSGLQ---GDGRWTIPITLSLGSYNNQRNFLLESQSQSVDISEMLPSSDGKLCSFKECD 536 (653)
Q Consensus 460 ~P~l~v~~~~~~i~l~Q~rf~~~~~~---~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 536 (653)
+|+++|++++++++|+|+||+..+.. ....|+|||+|.++++......|+..++.++.++. +
T Consensus 485 ~P~l~v~~~~~~~~l~Q~~f~~~~~~~~~~~~~w~iPi~~~~~~~~~~~~~~l~~~~~~~~~~~---------------~ 549 (897)
T 2xdt_A 485 FPLITITVRGRNVHMKQEHYMKGSDGAPDTGYLWHVPLTFITSKSDMVHRFLLKTKTDVLILPE---------------E 549 (897)
T ss_dssp EEEEEEEEETTEEEEEEEEECCC-----CCCCCCCEEEEEEESSCSSCEEEEECSSEEEEECSS---------------C
T ss_pred ceEEEEEEcCCEEEEEEEEeecCCCCCCCCCceEEEEEEEEeCCCCccceEEecCCceEEEccC---------------C
Confidence 99999999988999999999876432 24589999999876554445678877766666532 2
Q ss_pred CCceEEeccCceeEEEEEcCHHHHHHHHHHHHcC--CCChhcHHHHHHHHHHHHHcCCCCHHHHHHHHHhhhcCCCHHHH
Q 006262 537 ETLWIKVNVEQSGFYRVIYDDELSARLRKAVENN--CLSAADKLGILDDMLALCQACKQPLSYLLLLLDAHRKEHDSMVL 614 (653)
Q Consensus 537 ~~~wi~~N~~~~gyyrV~Yd~~~w~~l~~~l~~~--~i~~~~ra~li~D~~~l~~~g~l~~~~~l~l~~~l~~E~~~~~w 614 (653)
++||++|.++.|||||+||+++|+.|+++|..+ .|++.+|||||+|+|+||++|+++++.+|+|++||++|++|+||
T Consensus 550 -~~~i~~N~~~~gyyrV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~~~~~w 628 (897)
T 2xdt_A 550 -VEWIKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPV 628 (897)
T ss_dssp -CSCEEESGGGCSSCEEEECTTHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHTTTSSCHHHHHHHHGGGGGCCCHHHH
T ss_pred -CceEEECCCceEEEEEEcCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCCcHHHH
Confidence 589999999999999999999999999999753 69999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccChhhH---HHHHHHHHHhccccc
Q 006262 615 SKLINVCYDVVEIITDAMPDAV---NELKDFSSVSSNLLL 651 (653)
Q Consensus 615 ~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 651 (653)
.+++..|.+|..++.+. +.+ +.|++|+..++.++.
T Consensus 629 ~~~~~~l~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~ 666 (897)
T 2xdt_A 629 FQGLNELIPMYKLMEKR--DMNEVETQFKAFLIRLLRDLI 666 (897)
T ss_dssp HHHHHHHHHHHHHHHTS--SCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCC--hhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999874 356 899999999887754
No 4
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*
Probab=100.00 E-value=1.2e-114 Score=1001.09 Aligned_cols=572 Identities=33% Similarity=0.587 Sum_probs=512.7
Q ss_pred ceeeEEEEEEEEccCCceEEEEEEEEEEEecccCEEEEEecCceeEEEEEEecCCccccccceeecCCCcEEEEEeccCc
Q 006262 20 AIPSYYDLYIKLDLVACTFSGNVNININIIEKTNFIVLNALELNVHEVLFTSSHNQEYRPSDAIMDKDDEILVLVFDEPL 99 (653)
Q Consensus 20 ~~p~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~~~l~i~l~~~l 99 (653)
++|.||+|+|++++++.+|+|+|+| + ++++.|+||+.+|+|.+|++++ ....+.++ ++.++|.++
T Consensus 1 v~p~hY~l~l~~~~~~~~f~G~v~I--~--~~~~~i~L~~~~l~I~~v~~~g------~~~~~~~~--~~~l~i~~~--- 65 (780)
T 1z5h_A 1 MEVEKYDLTLDFDIQKRTFNGTETI--T--ADAGDIVLDAVGLQINWMKVNG------RDTAFTYD--GQTVRAPGD--- 65 (780)
T ss_dssp CCEEEEEEEEEEETTTTEEEEEEEE--E--ECSSCEEEECSSCEEEEEEETT------EECCCEEC--SSEEEECCC---
T ss_pred CEEEEEEEEEEEECCCCEEEEEEEE--E--cCCCEEEEEccCCEEEEEEEec------eeccEEEE--CCEEEEEeC---
Confidence 5799999999999999999999999 3 6789999999999999999852 23344444 347888775
Q ss_pred cceeEEEEEEEEeeecCCCcceEEeeeecCCeeeeeeecccccCCCCeeeeecCCCCCeeEEEEEEEeCCCCeEEecCcc
Q 006262 100 AVGEGILRIIFYGKLNEHTKGFYKCSYVEKEVKKNMAVTQFEAVDARRCFPCWDEPALKATFKITLDIPSELTALSNMPI 179 (653)
Q Consensus 100 ~~g~~~l~i~y~g~~~~~~~G~y~~~y~~~g~~~~~~~T~~ep~~Ar~~fPc~DeP~~ka~f~l~i~~p~~~~~~sn~~~ 179 (653)
+|.++|+|.|+|.++++..|+|++.|. +++++|||||.+||+||||||+|++||+|+++|++|++|+|+|||++
T Consensus 66 -~g~~~l~i~y~g~~~~~~~G~y~~~y~-----~~~~~Tq~ep~~AR~~fPc~DeP~~Katf~iti~~p~~~~~lSN~~~ 139 (780)
T 1z5h_A 66 -SQPQKIEISFAGKVSDSLSGIYYAGRE-----NGMITTHFEATDARRMFPCVDHPAYKAVFAITVVIDKDYDAISNMPP 139 (780)
T ss_dssp -SSSEEEEEEEEEECBSSSSEEEEESST-----TCEEEEECTTTCGGGTSCBCCCTTSCBEEEEEEEECTTCEEEESSCE
T ss_pred -CccEEEEEEEEEEeCCCcccceecccc-----ceEEEEccccCChhheeecCCCcccccEEEEEEEECCCCEEEeCCcc
Confidence 378999999999999988999999875 67889999999999999999999999999999999999999999998
Q ss_pred cceeecCCEEEEEEEeCCcccceEEEEEEecceeeeecccCCeEEEEEecCCCcchhHHHHHHHHHHHHHHHHHhCCCCC
Q 006262 180 LDEKLNGNLKTVYFEESPVMSTYLVAFVVGLFDHIEDTTTNGVKVHVYCPVGKSSEGKHALDVAIKSLGIYTEFFSTPYP 259 (653)
Q Consensus 180 ~~~~~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~~~~~l~~~e~~fg~~yp 259 (653)
.++ ..+++++++|+.++|||+|++||+||+|..++.... |+++++|++|+ ..++++++.+.+++++|+++||+|||
T Consensus 140 ~~~-~~~g~~~~~f~~t~~mstYL~a~~vg~f~~~~~~~~-gv~~~v~~~~~--~~~~~al~~~~~~l~~~e~~fg~~YP 215 (780)
T 1z5h_A 140 KRI-EVSERKVVEFQDTPRMSTYLLYVGIGKFRYEYEKYR-DIDLILASLKD--IRSKYPLDMARKSVEFYENYFGIPYA 215 (780)
T ss_dssp EEE-EESSSEEEEECCCCSBCGGGCCEEEECCEEEEEEET-TEEEEEEESSC--CCCSHHHHHHHHHHHHHHHHHSSCCS
T ss_pred ccc-cCCCceEEEEecCCcccceEEEEEEeccEEEeeccC-CeeEEEEEccc--hhHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 765 456788999999999999999999999998876554 89999999998 67899999999999999999999999
Q ss_pred CCCcceeecCCCCcccccccccceeecceeeecCCCCCHHHHHHHHHHHHHHHHHHHhcCccCccccchhHhhhhHHHHH
Q 006262 260 LPKLDMVAVSEFHAGAMENFGLIVYRENELLYNEKTSTANRKQIMAISTSHEVAHQWFGNLVTMEWWTHLWLNEGFATWI 339 (653)
Q Consensus 260 ~~kld~V~~P~~~~game~~Gli~~~e~~ll~~~~~s~~~~~~~~~~~iaHElaHqWfGnlVt~~~w~d~WL~EGfA~y~ 339 (653)
++|+|+|++|+|..|||||||+++|++..++++ +.++...++.++.+||||+|||||||+|||+||+|+|||||||+|+
T Consensus 216 ~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~-~~~~~~~~~~~~~viaHElaHqWfGnlVT~~~W~dlWLnEGfA~y~ 294 (780)
T 1z5h_A 216 LPKMHLISVPEFGAGAMENWGAITFREIYMDIA-ENSAVTVKRNSANVIAHEIAHQWFGDLVTMKWWNDLWLNESFATFM 294 (780)
T ss_dssp SSEEEEEEETTCTTCEECCTTEEEEEHHHHSCC-TTSCHHHHHHHHHHHHHHHHHTTBTTTEEESSGGGHHHHHHHHHHH
T ss_pred CccCCEEEcCCCCCCcccccCeeEeecceEeec-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCcccccccHHHHHHH
Confidence 999999999999999999999999999989998 6678888889999999999999999999999999999999999999
Q ss_pred HHHHHhhhCCchhhHHHHHHHhh-hhhccccccCCCCceeecCChhhhhhhcccccchhhhHHHHHHHHhhCHHHHHHHH
Q 006262 340 SYMATDIMFPEWKMWTQFLRQTS-HGLRLDAQEQSHPIEVEVHRADEIDQVFDAISYNKGSAVIRMLQSYLGEDIFQKSL 418 (653)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~p~~~~~~~~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~~~F~~~l 418 (653)
+++++++.+|+|.++.+|..... .++..|+..++||+..++.++.++...|+.++|.||++|+|||+..||++.|+++|
T Consensus 295 ~~~~~~~~~~~~~~~~~f~~~~~~~al~~D~~~~~~pi~~~v~~~~~~~~~fd~i~Y~KGa~vl~mL~~~lG~e~F~~~l 374 (780)
T 1z5h_A 295 SYKTMDTLFPEWSFWGDFFVSRTSGALRSDSLKNTHPIEVDVRDPDEISQIFDEISYGKGASILRMIEDYAGYEEFRKGI 374 (780)
T ss_dssp HHHHHHHHCTTTCHHHHHHHHTHHHHHHHTTSTTCCCSCCCCCSSCCTTTTSCHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCCceecCCCHHHHHHhcchhhhhhHHHHHHHHHHHhCHHHHHHHH
Confidence 99999999999998888876654 67888999999999988888989999999999999999999999999999999999
Q ss_pred HHHHHhcccCCCChHHHHHHHHhhcCCCHHHHHHHHhcCCCcceEEEEEeCCEEEEEEEeeecCCCCCCCeeEEEEEEEE
Q 006262 419 SLYMKKYAWKNVETEDLWSVLSEESGINITSLMECWTKQKGHPVVYVNCKDNLLEFKQSQFVSSGLQGDGRWTIPITLSL 498 (653)
Q Consensus 419 ~~yl~~~~~~~~~~~df~~~l~~~sg~~l~~~~~~W~~~~G~P~l~v~~~~~~i~l~Q~rf~~~~~~~~~~w~iPl~~~~ 498 (653)
+.|+++|++++++++|||+++++++|.++++||++|++|+|+|+++|++++++++|+|+||..++ .++..|+|||++ +
T Consensus 375 ~~yl~~~~~~~~t~~Dl~~~l~~~sg~dl~~~~~~W~~~~G~P~l~v~~~~~~~~l~Q~~f~~~~-~~~~~w~iPi~~-~ 452 (780)
T 1z5h_A 375 SKYLNDHKFGNAEGSDLWTAIEDVSGKPVKRVMEYWIKNPGYPVIKLKRNGRKITMYQTRFLLNG-EEEGRWPVPVNI-K 452 (780)
T ss_dssp HHHHHHHTTEEECHHHHHHHHHHHHCSCHHHHHHHHHHSCSCEEEEEEESSSEEEEEEEECCSSC-CEECCCCEEEEE-E
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHhCCCHHHHHHHHHhCCCCceEEEEecCcEEEEEEEEecCCC-CCCceEEEEEEE-c
Confidence 99999999999999999999999999999999999999999999999998889999999998765 334589999999 4
Q ss_pred CCcccceeeEeecceeEEEecCCCCCCCCccccccccCCCceEEeccCceeEEEEEcCHHHHHHHHHHHHcCCCChhcHH
Q 006262 499 GSYNNQRNFLLESQSQSVDISEMLPSSDGKLCSFKECDETLWIKVNVEQSGFYRVIYDDELSARLRKAVENNCLSAADKL 578 (653)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~wi~~N~~~~gyyrV~Yd~~~w~~l~~~l~~~~i~~~~ra 578 (653)
+++. .... +.++ ++.++. .+||++|.++.|||||+||+++|..|+++| ..|++.+|+
T Consensus 453 ~~~~-~~~~-l~~~--~~~~~~-----------------~~~i~~N~~~~gyyrv~Yd~~~~~~l~~~l--~~i~~~~Ra 509 (780)
T 1z5h_A 453 KKDG-VERI-LLED--EASIEA-----------------DGLIKINADSAGFYRVLYDDATFSDVMGHY--RDLSPLDRI 509 (780)
T ss_dssp ETTE-EEEE-EECS--SEEEEC-----------------TTEEEESGGGCSSSEEECCHHHHHHHHHTG--GGCCHHHHH
T ss_pred CCCc-eeee-ccCc--eEEccC-----------------CceEEEeCCCCEEEEEECCHHHHHHHHHHh--ccCCHHHHH
Confidence 3332 2234 5443 344431 389999999999999999999999999998 358999999
Q ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHhcccc
Q 006262 579 GILDDMLALCQACKQPLSYLLLLLDAHRKEHDSMVLSKLINVCYDVVEIITDAMPDAVNELKDFSSVSSNLL 650 (653)
Q Consensus 579 ~li~D~~~l~~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (653)
|||+|+|+|+++|+++++.+++|+.||++|++|+||.++++.|.++..+ . +.|++|+..+..++
T Consensus 510 ~li~D~~~l~~~g~~~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~~~~~--~------~~~~~~~~~l~~~~ 573 (780)
T 1z5h_A 510 GLVDDLFAFLLSGHIDPETYRQRIRNFFDDEDHNVITAIVGQMEYLRML--T------HAFDDDARAFCRSR 573 (780)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHGGGTTCCCHHHHHHHHHHHHHHHTT--C------STTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHhc--h------HHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998765 2 23666666665443
No 5
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=100.00 E-value=3.7e-90 Score=800.24 Aligned_cols=583 Identities=21% Similarity=0.267 Sum_probs=477.1
Q ss_pred ccCCCCCCCCceeeEEEEEEEEccCCceEEEEEEEEEEEecccCEEEEEecCceeEEEEEEecCCccccccceeecCCCc
Q 006262 10 FKSQARLPKFAIPSYYDLYIKLDLVACTFSGNVNININIIEKTNFIVLNALELNVHEVLFTSSHNQEYRPSDAIMDKDDE 89 (653)
Q Consensus 10 ~~~~~rLp~~~~p~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~~ 89 (653)
+.+++|+|...+| ||+|+++++++..+++|+++|++. .+++.|+||+.+ +|.+|++++ ....+..+++
T Consensus 7 ~l~~y~~~~~~v~-~~~L~l~l~~~~~~v~g~~~i~~~--~~~~~i~Ld~~~-~I~sv~v~g--------~~~~~~~~~~ 74 (867)
T 2gtq_A 7 YLKDYQTPAYHIL-KTDLHFDINEPQTVVKSRLTVEPQ--RVGEPLVLDGSA-KLLSVKING--------AAADYVLEGE 74 (867)
T ss_dssp EGGGCCCCSEEEE-EEEEEEEECSSCEEEEEEEEEEES--STTSCEEEECCS-EEEEEEETT--------EECCCEEETT
T ss_pred eccccCCCCCcee-EEEEEEEEECCcEEEEEEEEEEEe--CCCCEEEEecCC-CEEEEEECC--------eecceEeeCC
Confidence 4467788877666 899999999988888888877753 347889999999 999999852 2234444567
Q ss_pred EEEEEeccCccceeEEEEEEEEeee--cCCCcceEEeeeecCCeeeeeeecccccCCCCeeeeecCCCCCeeEEEEEEEe
Q 006262 90 ILVLVFDEPLAVGEGILRIIFYGKL--NEHTKGFYKCSYVEKEVKKNMAVTQFEAVDARRCFPCWDEPALKATFKITLDI 167 (653)
Q Consensus 90 ~l~i~l~~~l~~g~~~l~i~y~g~~--~~~~~G~y~~~y~~~g~~~~~~~T~~ep~~Ar~~fPc~DeP~~ka~f~l~i~~ 167 (653)
.++|. +|++|.++|+|.|++.. ++...|+|++. .+++|||||.+||+||||||+|++||+|+++|++
T Consensus 75 ~L~I~---~lp~g~~~l~I~y~~~p~~~~~~~Gly~s~--------~~~~Tq~ep~~AR~~fPc~DeP~~katf~itIt~ 143 (867)
T 2gtq_A 75 TLTIA---GVPSERFTVEVETEILPAENKSLMGLYASG--------GNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIVA 143 (867)
T ss_dssp EEEES---CCCSSCEEEEEEEEECGGGCCSCSEEEEET--------TEEEEECTTTTGGGTSCBCCSTTCCBEEEEEEEE
T ss_pred EEEEE---ecCCCcEEEEEEEEEeccCCCCCcEEEEEC--------CEEEEeeccCCCceeeccCCCCCcceEEEEEEEE
Confidence 88886 45567999999999864 34578999874 2778999999999999999999999999999999
Q ss_pred CCC-C-eEEecCcccceee-cCCEEEEEEEeCCcccceEEEEEEecceeeeec--ccC--CeEEEEEecCCCcchhHHHH
Q 006262 168 PSE-L-TALSNMPILDEKL-NGNLKTVYFEESPVMSTYLVAFVVGLFDHIEDT--TTN--GVKVHVYCPVGKSSEGKHAL 240 (653)
Q Consensus 168 p~~-~-~~~sn~~~~~~~~-~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~--~~~--g~~v~v~~~~~~~~~~~~~l 240 (653)
|++ | +++|||+++++.. .+++++++|+.++|||+|++||++|+|..++.. +.+ ++++++|++|+..+.+++++
T Consensus 144 p~~~y~~~lSNg~l~~~~~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~al 223 (867)
T 2gtq_A 144 DKKRYPVLLSNGNKIDGGEFSDGRHWVKWEDPFSKPSYLFALVAGDLAVTEDYFTTMSGRNVKIEFYTTEADKPKVGFAV 223 (867)
T ss_dssp ETTTCCEEEESSEEEEEEECTTSEEEEEEECCSCBCGGGCCEEEECCEEEEEEEECTTSCEEEEEEEECTTTGGGCHHHH
T ss_pred ccccceEEEeCCccccceeecCCeEEEEEEeCCCccccceeEEEecceEeeeceeccCCCceEEEEEeccccHHHHHHHH
Confidence 997 6 8999999887643 577889999999999999999999999987752 223 48999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCcceeecCCCCcccccccccceeecceeeecCCCCCHHHHHHHHHHHHHHHHHHHhcCc
Q 006262 241 DVAIKSLGIYTEFFSTPYPLPKLDMVAVSEFHAGAMENFGLIVYRENELLYNEKTSTANRKQIMAISTSHEVAHQWFGNL 320 (653)
Q Consensus 241 ~~~~~~l~~~e~~fg~~yp~~kld~V~~P~~~~game~~Gli~~~e~~ll~~~~~s~~~~~~~~~~~iaHElaHqWfGnl 320 (653)
+.+.+++++||++||+|||++|+++|++|+|..|||||||+++|++..++++++.++...++.+..+||||+|||||||+
T Consensus 224 ~~~~~~l~~~e~~fG~pYP~~k~d~Vavpdf~~GaMEn~glitf~e~~ll~~~~~~~~~~~~~i~~vIaHElAHqWfGnl 303 (867)
T 2gtq_A 224 ESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWTGNR 303 (867)
T ss_dssp HHHHHHHHHHHHHHCCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTT
T ss_pred HHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCccccccCCceeecccccccCcccCcHHHHHHHHHHHHHHHHHHhcCcE
Confidence 99999999999999999999999999999999999999999999999999998877777888899999999999999999
Q ss_pred cCccccchhHhhhhHHHHHHHHHHhhhCCchh-hHHHHHHHhh-hhhccccccCCCCceeecCChhhhhhhcccccchhh
Q 006262 321 VTMEWWTHLWLNEGFATWISYMATDIMFPEWK-MWTQFLRQTS-HGLRLDAQEQSHPIEVEVHRADEIDQVFDAISYNKG 398 (653)
Q Consensus 321 Vt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~D~~~~~~p~~~~~~~~~~~~~~f~~i~Y~Kg 398 (653)
|||+||+++|||||||+|++..+.....+... .... +.... .++..|+...+||+.. .++.+++..|+.++|.||
T Consensus 304 VT~~~W~dlWLnEGfAty~e~~~~~~~~~~~~~~~~~-~~~l~~~~~~~D~~~~~~Pi~~--~~~~~i~~~f~~i~Y~KG 380 (867)
T 2gtq_A 304 VTCRDWFQLSLKEGLTVFRDQEFSGDRASRAVRRIEN-IRLLRQHQFPEDAGPTAHPVRP--ASYEEMNNFYTMTVYEKG 380 (867)
T ss_dssp BEESSGGGHHHHHHHHHHHHHHHHHHHSCHHHHHHHH-HHHHHHHHHHHHHSTTCCCSSC--SEESCGGGGCSHHHHHHH
T ss_pred EEecccccccchHHHHHHHHHHHHHHHcCHHHHHHHH-HHHHHHHhhhhccCccCCCCcC--CChhhhhhhccchhhhHH
Confidence 99999999999999999999888887765321 1111 11111 2466788888999864 245667888999999999
Q ss_pred hHHHHHHHHhhCHHHHHHHHHHHHHhcccCCCChHHHHHHHHhhcCCCHHHHHHHHhcCCCcceEEEEEe--CCE--EEE
Q 006262 399 SAVIRMLQSYLGEDIFQKSLSLYMKKYAWKNVETEDLWSVLSEESGINITSLMECWTKQKGHPVVYVNCK--DNL--LEF 474 (653)
Q Consensus 399 ~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~sg~~l~~~~~~W~~~~G~P~l~v~~~--~~~--i~l 474 (653)
++|+|||+..||++.|+++|+.|+++|++++++++|||+++++++|.|+..| ++|++|+|+|+++|++. .+. ++|
T Consensus 381 a~vl~mL~~~lG~e~F~~glr~Yl~~~~~~~~t~~Df~~~l~~~sg~dl~~f-~~W~~q~G~P~l~v~~~~~~~~~~l~l 459 (867)
T 2gtq_A 381 AEVVRMYHTLLGEEGFQKGMKLYFQRHDGQAVTCDDFRAAMADANGINLDQF-ALWYSQAGTPVLEAEGRLKNNIFELTV 459 (867)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHTCCCGGG-GHHHHCCSCCEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhCCCHHHH-HHHhcCCCCceEEEEEEecCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999999985 79999999999999985 444 889
Q ss_pred EEEeeecCCCCCCCeeEEEEEEEECC--ccc-----------ceeeEeecceeEEEecCCCCCCCCccccccccCCCceE
Q 006262 475 KQSQFVSSGLQGDGRWTIPITLSLGS--YNN-----------QRNFLLESQSQSVDISEMLPSSDGKLCSFKECDETLWI 541 (653)
Q Consensus 475 ~Q~rf~~~~~~~~~~w~iPl~~~~~~--~~~-----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~wi 541 (653)
+|+++...+..+...|+|||++...+ +.. ...+++++++.++.++.+. . ..|+
T Consensus 460 ~Q~~~~~~~~~~~~~~~iPi~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-------------~-~p~~ 525 (867)
T 2gtq_A 460 KQTVPPTPDMTDKQPMMIPVKVGLLNRNGEAVAFDYQGKRATEAVLLLTEAEQTFLLEGVT-------------E-AVVP 525 (867)
T ss_dssp EEECCCBTTBSCCCCCCEEEEEEEECTTCCBCCEECSSCEESCEEEEECSSEEEEEEBCCC-------------S-CCEE
T ss_pred EEecCCCCCCCCCceEEEEEEEEEEcCCCcccccccccccccceEEEEcCCceEEEEeCCC-------------C-CCce
Confidence 99997644444455899999997643 221 1235677788888887421 1 4689
Q ss_pred EeccCceeEEEEEcCHHHHHHHHHHHHcCCCChhcHHHH---HHHHHHH-----HHcCCC-C-HHHHHHHHHhhh-cCC-
Q 006262 542 KVNVEQSGFYRVIYDDELSARLRKAVENNCLSAADKLGI---LDDMLAL-----CQACKQ-P-LSYLLLLLDAHR-KEH- 609 (653)
Q Consensus 542 ~~N~~~~gyyrV~Yd~~~w~~l~~~l~~~~i~~~~ra~l---i~D~~~l-----~~~g~l-~-~~~~l~l~~~l~-~E~- 609 (653)
.+|.+..+++||+|+-..++. ...+.... ++.+|.++ |.|...+ +.+|.. + +..+++++.++. +|+
T Consensus 526 ~l~r~fs~~~~l~~~~~~~~l-~~l~~~~~-d~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (867)
T 2gtq_A 526 SLLRGFSAPVHLNYPYSDDDL-LLLLAHDS-DAFTRWEAAQTLYRRAVAANLATLSDGVELPKHEKLLAAVEKVISDDLL 603 (867)
T ss_dssp EESTTCCSSCEEECCCCHHHH-HHHHHHCS-CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHCSSS
T ss_pred EecCCCCccEEEECCCCHHHH-HHHHhhCC-ChhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHhcCcCC
Confidence 999999999999976544432 23333332 58888766 8888888 667776 7 889999999865 787
Q ss_pred CHHHHHHHHH--HHHHHHHHHhccChhh
Q 006262 610 DSMVLSKLIN--VCYDVVEIITDAMPDA 635 (653)
Q Consensus 610 ~~~~w~~~~~--~l~~~~~~~~~~~~~~ 635 (653)
++.+|..++. .+.+|...+....|+.
T Consensus 604 d~~~~a~~l~lp~~~~l~~~~~~~d~~~ 631 (867)
T 2gtq_A 604 DNAFKALLLGVPSEAELWDGAENIDPLR 631 (867)
T ss_dssp CHHHHHHHTCCCCHHHHTTTCSSBCHHH
T ss_pred CHHHHHHHhcCCCHHHHHhhcccCChHH
Confidence 9999999998 6777776443333444
No 6
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*
Probab=100.00 E-value=1e-89 Score=788.42 Aligned_cols=518 Identities=24% Similarity=0.310 Sum_probs=432.6
Q ss_pred CCCceeeEEEEEEEEccCCceEEEEEEEEEEEecccCEEEEEecCceeEEEEEEecCCccccccceeecCCCcEEEEEec
Q 006262 17 PKFAIPSYYDLYIKLDLVACTFSGNVNININIIEKTNFIVLNALELNVHEVLFTSSHNQEYRPSDAIMDKDDEILVLVFD 96 (653)
Q Consensus 17 p~~~~p~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~~~l~i~l~ 96 (653)
|..+...||+|+++++++..+++|+++|++...++++.|+||+.+|+|.+|++++ ..+. ....+..+++.|+|.++
T Consensus 11 ~~~~~V~h~~L~l~ld~~~~~v~G~~~i~~~~~~~~~~l~LD~~~L~I~sV~vnG---~~l~-~~~~~~~~~~~L~I~l~ 86 (889)
T 3ebh_A 11 PSGFIINQVTLNINIHDQETIVRSVLDMDISKHNVGEDLVFDGVGLKINEISINN---KKLV-EGEEYTYDNEFLTIFSK 86 (889)
T ss_dssp CCSEEEEEEEEEEEECSSCEEEEEEEEEEECTTCCSCCEEEECCSCEEEEEEETT---EECC-BTTTEEECSSEEEECGG
T ss_pred CCCcEEEEEEEEEEEeCCCeEEEEEEEEEEecCCCCceEEEECCCCEEEEEEECC---EEcC-cccceEecCCEEEEecC
Confidence 4468889999999999999999999999988766678999999999999999852 1111 01124556789999887
Q ss_pred cCccceeEEEEEEEEeee--cCCCcceEEeeeecCCeeeeeeecccccCCCCeeeeecCCCCCeeEEEEEEEeCCC-C-e
Q 006262 97 EPLAVGEGILRIIFYGKL--NEHTKGFYKCSYVEKEVKKNMAVTQFEAVDARRCFPCWDEPALKATFKITLDIPSE-L-T 172 (653)
Q Consensus 97 ~~l~~g~~~l~i~y~g~~--~~~~~G~y~~~y~~~g~~~~~~~T~~ep~~Ar~~fPc~DeP~~ka~f~l~i~~p~~-~-~ 172 (653)
. ++++.++|+|.|+|.. ++.+.|+|++. .+++|||||.+||+||||||+|++||+|+++|++|++ | +
T Consensus 87 ~-l~~~~~~l~I~y~~~p~~~~~l~Gly~s~--------~~~~TQ~Ep~~AR~~fPC~DeP~~KAtf~itIt~p~~~~~v 157 (889)
T 3ebh_A 87 F-VPKSKFAFSSEVIIHPETNYALTGLYKSK--------NIIVSQCEATGFRRITFFIDRPDMMAKYDVTVTADKEKYPV 157 (889)
T ss_dssp G-SCSSSEEEEEEEEECGGGCTTCSEEEEET--------TEEEEECTTTTGGGTSCBCCSTTCCEEEEEEEEEETTTCCE
T ss_pred C-CCCCcEEEEEEEEecCccCCCceeeEEEC--------CeEEEcccCCCCCEEEEEcCCCCcceEEEEEEEEccccCeE
Confidence 5 6546899999999985 34678999874 2788999999999999999999999999999999997 8 5
Q ss_pred EEecCccccee-ecCCEEEEEEEeCCcccceEEEEEEecceeeeec--cc-C--CeEEEEEecCCCcchhHHHHHHHHHH
Q 006262 173 ALSNMPILDEK-LNGNLKTVYFEESPVMSTYLVAFVVGLFDHIEDT--TT-N--GVKVHVYCPVGKSSEGKHALDVAIKS 246 (653)
Q Consensus 173 ~~sn~~~~~~~-~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~--~~-~--g~~v~v~~~~~~~~~~~~~l~~~~~~ 246 (653)
++|||+++++. ..+++++++|+.++|||+|++||+||+|..++.. +. + ++++++|++|+..+.++++++.+.++
T Consensus 158 alSNg~l~~~~~~~~g~~~~~f~~t~pmstYLvA~~vG~f~~~~~~~~t~~~G~~v~l~vy~~p~~~~~~~~al~~~~~~ 237 (889)
T 3ebh_A 158 LLSNGDKVNEFEIPGGRHGARFNDPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECLKKS 237 (889)
T ss_dssp EEESSEEEEEEEETTTEEEEEEEEEEEECGGGCCEEEECEEEEEEEEECSSSCCEEEEEEEEEGGGGGGGHHHHHHHHHH
T ss_pred EEccCccccceecCCCeEEEEEecCCccchhheeeEEecceEEeeeeeecCCCCceEEEEEeccCcHHHHHHHHHHHHHH
Confidence 79999988764 4677899999999999999999999999987643 22 3 48899999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCcceeecCCCCcccccccccceeecceeeecCCCCCHHHHHHHHHHHHHHHHHHHhcCccCcccc
Q 006262 247 LGIYTEFFSTPYPLPKLDMVAVSEFHAGAMENFGLIVYRENELLYNEKTSTANRKQIMAISTSHEVAHQWFGNLVTMEWW 326 (653)
Q Consensus 247 l~~~e~~fg~~yp~~kld~V~~P~~~~game~~Gli~~~e~~ll~~~~~s~~~~~~~~~~~iaHElaHqWfGnlVt~~~w 326 (653)
+++||++||+|||++|+++|++|+|..||||||||++|++..+++++..++...++.+..+||||+|||||||+|||+||
T Consensus 238 l~~~e~~fG~pYP~~kyd~VavPdF~~GaMEN~GLvtf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHQWFGNlVT~~~W 317 (889)
T 3ebh_A 238 MAFDEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTLRDW 317 (889)
T ss_dssp HHHHHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTSCTHHHHHHHHHHHHHHHTTTBTTTBEESSG
T ss_pred HHHHHHHHCCCCCCCceEEEEeccccchhhcCCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhcCeeeeccc
Confidence 99999999999999999999999999999999999999999999998877777888899999999999999999999999
Q ss_pred chhHhhhhHHHHHHHHHHhhhCCchhh-HHHHHHHhhhhhccccccCCCCceeecCChhhhhhhcccccchhhhHHHHHH
Q 006262 327 THLWLNEGFATWISYMATDIMFPEWKM-WTQFLRQTSHGLRLDAQEQSHPIEVEVHRADEIDQVFDAISYNKGSAVIRML 405 (653)
Q Consensus 327 ~d~WL~EGfA~y~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~p~~~~~~~~~~~~~~f~~i~Y~Kg~~vl~mL 405 (653)
+|+|||||||+|++..+.+...+.... ..........++..|+...+||+.. .++.+++..|+.++|.||++|||||
T Consensus 318 ~dlWLnEGFAtY~e~~~~~~~~~~~~~r~~~~~~lr~~~~~~D~~~~shPI~~--~~~~ei~~~f~~i~Y~KGa~vLrML 395 (889)
T 3ebh_A 318 FQLTLKEGLTVHRENLFSEEMTKTVTTRLSHVDLLRSVQFLEDSSPLSHPIRP--ESYVSMENFYTTTVYDKGSEVMRMY 395 (889)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHTSTTCCCSSC--SEESCGGGCCCHHHHHHHHHHHHHH
T ss_pred ccceeeHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhhccCccCCCCCC--cchhhhhhhccchhhhHHHHHHHHH
Confidence 999999999999998888777654221 1111110113466788888899863 2345678899999999999999999
Q ss_pred HHhhCHHHHHHHHHHHHHhcccCCCChHHHHHHHHhhc-------CCCHHHHHHHHhcCCCcceEEEEEeC----C--EE
Q 006262 406 QSYLGEDIFQKSLSLYMKKYAWKNVETEDLWSVLSEES-------GINITSLMECWTKQKGHPVVYVNCKD----N--LL 472 (653)
Q Consensus 406 ~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~s-------g~~l~~~~~~W~~~~G~P~l~v~~~~----~--~i 472 (653)
+..||++.|+++|+.|+++|++++++++|||+++++++ |.|++. |++|++|+|+|+++|+++. + ++
T Consensus 396 ~~~lGde~F~~gLr~Yl~~~~~~natt~Df~~ale~as~~~~~~~g~dL~~-f~~Wl~q~G~P~l~V~~~~d~~~~~~~l 474 (889)
T 3ebh_A 396 LTILGEEYYKKGFDIYIKKNDGNTATCEDFNYAMEQAYKMKKADNSANLNQ-YLLWFSQSGTPHVSFKYNYDAEKKQYSI 474 (889)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSEECHHHHHHHHHHHHHHHHTCTTCCCTG-GGHHHHCCSCCEEEEEEEEETTTTEEEE
T ss_pred HHHhCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhccCCCCCCHHH-HHHHhcCCCCceEEEEEeecCCCCEEEE
Confidence 99999999999999999999999999999999999999 999995 6899999999999999763 2 68
Q ss_pred EEEEEeeecCCCCCCCeeEEEEEEEECC---ccc---ceeeEeecceeEEEecCCCCCCCCccccccccCCCceEEeccC
Q 006262 473 EFKQSQFVSSGLQGDGRWTIPITLSLGS---YNN---QRNFLLESQSQSVDISEMLPSSDGKLCSFKECDETLWIKVNVE 546 (653)
Q Consensus 473 ~l~Q~rf~~~~~~~~~~w~iPl~~~~~~---~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~wi~~N~~ 546 (653)
+|+|+++...+...+..|.|||++...+ +.. ...+.++..++++.++.+. . .-+..+|.+
T Consensus 475 tl~Q~~~~~~~~~~~~~~~IPl~v~l~~~~~G~~~~~~~~l~l~~~~q~f~~~~~~-------------~-~p~~sl~r~ 540 (889)
T 3ebh_A 475 HVNQYTKPDENQKEKKPLFIPISVGLINPENGKEMISQTTLELTKESDTFVFNNIA-------------V-KPIPSLFRG 540 (889)
T ss_dssp EEEEECCCCSSCSSCCCCCEEEEEEEECTTTCCBCSCCEEEEECSSEEEEEESCCC-------------S-CCEEEESTT
T ss_pred EEEEecCCCCCCCCCceEEEEEEEEEEeCCCCccccceeEEEecCCcEEEEEcCCC-------------C-CCeEEEcCC
Confidence 8889887655554556899999997733 221 2346778889999997531 1 246789999
Q ss_pred ceeEEEEEcC--HHHHHHHH
Q 006262 547 QSGFYRVIYD--DELSARLR 564 (653)
Q Consensus 547 ~~gyyrV~Yd--~~~w~~l~ 564 (653)
..+++|+.|+ .+.+..|.
T Consensus 541 fsa~v~l~~~~~~~~l~~l~ 560 (889)
T 3ebh_A 541 FSAPVYIEDQLTDEERILLL 560 (889)
T ss_dssp CCSSSEEECCCCHHHHHHHH
T ss_pred CCceEEEeCCCCHHHHHHHH
Confidence 9999999987 44443333
No 7
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*
Probab=100.00 E-value=1.5e-89 Score=792.36 Aligned_cols=537 Identities=22% Similarity=0.273 Sum_probs=448.6
Q ss_pred ccccCCCCCCCCceeeEEEEEEEEccCCceEEEEEEEEEEEecccCEEEEEecCceeEEEEEEecCCccccccce-eecC
Q 006262 8 NQFKSQARLPKFAIPSYYDLYIKLDLVACTFSGNVNININIIEKTNFIVLNALELNVHEVLFTSSHNQEYRPSDA-IMDK 86 (653)
Q Consensus 8 ~~~~~~~rLp~~~~p~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~-~~~~ 86 (653)
..+..++|+|...+| ||+|++++++...+++|+++|++... +++.|+||+.+|+|.+|.+++ .++ .++.
T Consensus 28 ~~~~~~y~~~~~~v~-~~~L~l~l~~~~~~v~g~~~i~~~~~-~~~~l~Ld~~~L~I~sV~v~G--------~~l~~y~~ 97 (891)
T 3b34_A 28 AKYRHDYRAPDYQIT-DIDLTFDLDAQKTVVTAVSQAVRHGA-SDAPLRLNGEDLKLVSVHIND--------EPWTAWKE 97 (891)
T ss_dssp CEEGGGCCCCSEEEE-EEEEEEECCSSCEEEEEEEEEEECSC-TTCCEEEECSSCEEEEEEETT--------EECCSEEE
T ss_pred ccchhhCCCCCceeE-EEEEEEEEECCceEEEEEEEEEEccC-CCCEEEEECCCCEEEEEEEcC--------EEcceEEe
Confidence 345577888877666 89999999999999999998887654 567899999999999999852 222 4555
Q ss_pred CCcEEEEEeccCccceeEEEEEEEEeee--cCCCcceEEeeeecCCeeeeeeecccccCCCCeeeeecCCCCCeeEEEEE
Q 006262 87 DDEILVLVFDEPLAVGEGILRIIFYGKL--NEHTKGFYKCSYVEKEVKKNMAVTQFEAVDARRCFPCWDEPALKATFKIT 164 (653)
Q Consensus 87 ~~~~l~i~l~~~l~~g~~~l~i~y~g~~--~~~~~G~y~~~y~~~g~~~~~~~T~~ep~~Ar~~fPc~DeP~~ka~f~l~ 164 (653)
+++.|+|. +++ +.++|+|.|++.. ++...|+|++. .+++|||||.+||+||||||+|++||+|+++
T Consensus 98 ~~~~L~I~---~lp-~~~~l~I~y~~~p~~~~~l~Gly~s~--------~~~~Tq~Ep~~AR~~fPc~DeP~~kAtf~it 165 (891)
T 3b34_A 98 EEGALVIS---NLP-ERFTLKIINEISPAANTALEGLYQSG--------DALCTQCEAEGFRHITYYLDRPDVLARFTTK 165 (891)
T ss_dssp ETTEEEEC---SCC-SEEEEEEEEEECGGGCCSCCEEEEET--------TEEEEECTTTTGGGTSSBCCSTTCCEEEEEE
T ss_pred eCCEEEEE---eCC-CeEEEEEEEEEeecccCCCceEEEeC--------CEEEeccccCCCCccccCCCCcccceEEEEE
Confidence 56788886 343 6899999999864 34568999874 2678999999999999999999999999999
Q ss_pred EEeCCC-C-eEEecCcccceee-cCCEEEEEEEeCCcccceEEEEEEecceeeeec--ccC--CeEEEEEecCCCcchhH
Q 006262 165 LDIPSE-L-TALSNMPILDEKL-NGNLKTVYFEESPVMSTYLVAFVVGLFDHIEDT--TTN--GVKVHVYCPVGKSSEGK 237 (653)
Q Consensus 165 i~~p~~-~-~~~sn~~~~~~~~-~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~--~~~--g~~v~v~~~~~~~~~~~ 237 (653)
|++|++ | +++|||+++++.. .+++++++|+.++|||+|++||+||+|..++.. +.+ ++++++|++|+..+.++
T Consensus 166 I~~p~~~y~~alSNg~l~~~~~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~ 245 (891)
T 3b34_A 166 IIADKIKYPFLLSNGNRVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAP 245 (891)
T ss_dssp EEEETTTCCEEEESSEEEEEEECSTTEEEEEEEEEEEECGGGCCEEEECCEEEEEEEECTTCCEEEEEEEECTTCGGGCH
T ss_pred EEeccccceEEEeCCccccceeecCCeEEEEEEeCCCccceeeEEEeccceEEeeeeeccCCCceEEEEEeccCcHHHHH
Confidence 999997 6 8999999887643 577889999999999999999999999987742 223 48999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCcccccccccceeecceeeecCCCCCHHHHHHHHHHHHHHHHHHHh
Q 006262 238 HALDVAIKSLGIYTEFFSTPYPLPKLDMVAVSEFHAGAMENFGLIVYRENELLYNEKTSTANRKQIMAISTSHEVAHQWF 317 (653)
Q Consensus 238 ~~l~~~~~~l~~~e~~fg~~yp~~kld~V~~P~~~~game~~Gli~~~e~~ll~~~~~s~~~~~~~~~~~iaHElaHqWf 317 (653)
++++.+.+++++||++||+|||++|+++|++|+|..|||||||+++|++..+++++..++...++.+..+||||+|||||
T Consensus 246 ~al~~~~~~l~~~e~~fG~pYP~~k~diVavPdf~~GaMEn~GLitf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHqWF 325 (891)
T 3b34_A 246 WAMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWT 325 (891)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTB
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCcCccccCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999998877777888899999999999999
Q ss_pred cCccCccccchhHhhhhHHHHHHHHHHhhhCCchhhHHHHH--HHhh-hhhccccccCCCCceeecCChhhhhhhccccc
Q 006262 318 GNLVTMEWWTHLWLNEGFATWISYMATDIMFPEWKMWTQFL--RQTS-HGLRLDAQEQSHPIEVEVHRADEIDQVFDAIS 394 (653)
Q Consensus 318 GnlVt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~D~~~~~~p~~~~~~~~~~~~~~f~~i~ 394 (653)
||+|||+||+++|||||||+|++..+.+...+... ..+. .... .++..|+...+||+.. .++.+++..|+.++
T Consensus 326 GNlVT~~~W~dlWLnEGFAtY~e~~~~~~~~~~~~--~~~~~~~~l~~~~~~~D~~~~~~Pi~~--~~~~~i~~~f~~i~ 401 (891)
T 3b34_A 326 GNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAV--NRINNVRTMRGLQFAEDASPMAHPIRP--DMVIEMNNFYTLTV 401 (891)
T ss_dssp TTTEEESSGGGHHHHHHHHHHHHHHHHHHHSCHHH--HHHHHHHHHHHTHHHHHTSTTCCCSSC--SEESCGGGGCCHHH
T ss_pred CCCCcccchhhceehHHHHHHHHHHHHHHHhCHHH--HHHHHHHHHHHhhhhhhccccCCCCcc--ccccccccccccch
Confidence 99999999999999999999999888887766321 1111 1111 2356688888899864 23456788899999
Q ss_pred chhhhHHHHHHHHhhCHHHHHHHHHHHHHhcccCCCChHHHHHHHHhhcCCCHHHHHHHHhcCCCcceEEEEEeC----C
Q 006262 395 YNKGSAVIRMLQSYLGEDIFQKSLSLYMKKYAWKNVETEDLWSVLSEESGINITSLMECWTKQKGHPVVYVNCKD----N 470 (653)
Q Consensus 395 Y~Kg~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~sg~~l~~~~~~W~~~~G~P~l~v~~~~----~ 470 (653)
|.||++|||||+..||++.|+++|+.|+++|++++++++|||+++++++|.|++. |++|++++|+|+++|++.. +
T Consensus 402 Y~KGa~VLrML~~~lG~e~F~~gLr~Yl~~~~~~~att~Df~~ale~~sg~dL~~-f~~W~~q~G~P~l~V~~~~~~~~~ 480 (891)
T 3b34_A 402 YEKGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSH-FRRWYSQSGTPIVTVKDDYNPETE 480 (891)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHHCCCCTT-TTHHHHCCSCCEEEEEEEEETTTT
T ss_pred hhHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHHH-HHHHHcCCCCceEEEEEEeecCCC
Confidence 9999999999999999999999999999999999999999999999999999998 5799999999999998752 3
Q ss_pred --EEEEEEEeeecCCCCCCCeeEEEEEEEECC--ccc----------ceeeEeecceeEEEecCCCCCCCCccccccccC
Q 006262 471 --LLEFKQSQFVSSGLQGDGRWTIPITLSLGS--YNN----------QRNFLLESQSQSVDISEMLPSSDGKLCSFKECD 536 (653)
Q Consensus 471 --~i~l~Q~rf~~~~~~~~~~w~iPl~~~~~~--~~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 536 (653)
.++|+|+++...+......|+|||++.+.+ +.. ...+++++++.++.++.+. .
T Consensus 481 ~~~ltl~Q~~~~~~~~~~~~~~~iPi~v~l~~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~-------------~ 547 (891)
T 3b34_A 481 QYTLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVIPLQKGGHPVNSVLNVTQAEQTFVFDNVY-------------F 547 (891)
T ss_dssp EEEEEEEEECCCBTTBSCCCCCCEEEEEEEECTTSCBCCCEETTEECCSEEEECSSEEEEEECCCC-------------S
T ss_pred EEEEEEEEecCCCCCCCCCceEEEEEEEEEEcCCCCcccccccccccceEEEecCCcEEEEEccCC-------------C
Confidence 588999987544444455899999997643 221 1246778888888887431 1
Q ss_pred CCceEEeccCceeEEEEEcCHHHHHHHHHHHHcCCCChhcHHHHHHHHHHH
Q 006262 537 ETLWIKVNVEQSGFYRVIYDDELSARLRKAVENNCLSAADKLGILDDMLAL 587 (653)
Q Consensus 537 ~~~wi~~N~~~~gyyrV~Yd~~~w~~l~~~l~~~~i~~~~ra~li~D~~~l 587 (653)
..|+.+|.+..|||||+||..+|+.+.. +..+ -++.+|.+.++++...
T Consensus 548 -~P~~~l~~~~s~~~~v~~~~~~~~l~~~-l~~d-~d~~~R~~a~~~L~~~ 595 (891)
T 3b34_A 548 -QPVPALLCEFSAPVKLEYKWSDQQLTFL-MRHA-RNDFSRWDAAQSLLAT 595 (891)
T ss_dssp -CCEEEESTTCCSSCEEECCCCHHHHHHH-HHHC-SSHHHHHHHHHHHHHH
T ss_pred -CCcEEEcCCCcceEEEeCCCCHHHHHHH-HhhC-CChhHHHHHHHHHHHH
Confidence 4699999999999999999988877754 3332 3688888888877664
No 8
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}
Probab=100.00 E-value=4e-85 Score=736.44 Aligned_cols=527 Identities=17% Similarity=0.247 Sum_probs=420.0
Q ss_pred CCCCCCCceeeEEEEEEEEccCCceEEEEEEEEEEEecc-cCEEEEEecCceeEEEEEEecCCccccccceeecC----C
Q 006262 13 QARLPKFAIPSYYDLYIKLDLVACTFSGNVNININIIEK-TNFIVLNALELNVHEVLFTSSHNQEYRPSDAIMDK----D 87 (653)
Q Consensus 13 ~~rLp~~~~p~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~-~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~----~ 87 (653)
.+|+|..+.|.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+.+|+|.+|.+...... .....+..+. .
T Consensus 19 ~~~~p~~~~~~hy~l~l~~d~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~l~I~~v~v~~~~g~-~~~~~~~~~~~~~~~ 97 (605)
T 3cia_A 19 TYANYDQVKATHVYLDLNVDFDKKSLSGFAELSLDWFTDNKAPLILDTRDLVIHRVMAKNSQGQ-WVKVNYDLAKRDDVL 97 (605)
T ss_dssp CCCCTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECCSSCCCEEEBCSSEEEEEEEEECTTCC-EEEECEEEEEECSSS
T ss_pred cccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEEEcCCCC-ccceeEEecCccccC
Confidence 468999999999999999999999999999999999876 789999999999999998310000 0122333332 3
Q ss_pred CcEEEEEeccCccceeEEEEEEEEeeecCCCcceEEeee-ecCCeeeeeeecccccCCCCeeeeecCCCCCeeEEEEEEE
Q 006262 88 DEILVLVFDEPLAVGEGILRIIFYGKLNEHTKGFYKCSY-VEKEVKKNMAVTQFEAVDARRCFPCWDEPALKATFKITLD 166 (653)
Q Consensus 88 ~~~l~i~l~~~l~~g~~~l~i~y~g~~~~~~~G~y~~~y-~~~g~~~~~~~T~~ep~~Ar~~fPc~DeP~~ka~f~l~i~ 166 (653)
++.++|.++ ++.++|+|.|+|.++. .|++...+ ..+|..+++++|||||.+||+||||||+|++||+|+++|+
T Consensus 98 ~~~l~i~l~----~~~~~l~i~y~~~~~~--~gl~~~~~~~~~g~~~~~~~Tq~ep~~AR~~fPc~D~P~~katf~i~i~ 171 (605)
T 3cia_A 98 GSKLTINTP----LNAKKVRVYYNSTEKA--TGLQWLSAEQTAGKEKPFLFSQNQAIHARSWIPIQDTPSVRVTYTARIT 171 (605)
T ss_dssp CEEEEECCC----TTCSEEEEEEEECTTC--TTEEEECGGGSSSSSSCEEEECCTTTTGGGTSCBCCCTTCCEEEEEEEE
T ss_pred CCeEEEEeC----CceEEEEEEEEEecCC--CceEEecccccCCCcccEEEecCcccChhhceecCCCcCceeEEEEEEE
Confidence 567888775 2789999999998654 46654433 2356778888999999999999999999999999999999
Q ss_pred eCCCCeEEecCcccceeecCCEEEEEEEeCCcccceEEEEEEecceeeeecccCCeEEEEEecCCCcchhHHHHHHHHHH
Q 006262 167 IPSELTALSNMPILDEKLNGNLKTVYFEESPVMSTYLVAFVVGLFDHIEDTTTNGVKVHVYCPVGKSSEGKHALDVAIKS 246 (653)
Q Consensus 167 ~p~~~~~~sn~~~~~~~~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~~~~~ 246 (653)
+|++|+|+|||....+...++ +++|+.++|||+|++||+||+|...+ .|+++++|++|+..+.++++++.+.++
T Consensus 172 ~p~~~~alsng~~~~~~~~~~--~~~f~~t~pmstYl~a~~vg~f~~~~----~g~~~~v~~~p~~~~~~~~~~~~~~~~ 245 (605)
T 3cia_A 172 TDKDLLAVMSANNEPGTERDG--DYFFSMPQAIPPYLIAIGVGDLEFKA----MSHQTGIYAESYILDAAVAEFDDTQAM 245 (605)
T ss_dssp CCTTCEEEESSEEC----CCS--EEEEEEEEEECGGGCCEEEESCEEEE----SSSSEEEEECSTTHHHHHHHSTTHHHH
T ss_pred EcCCcEEEecCCccceecCCC--eEEEeeCCCccceeEEEEEeeeeEec----CCCeEEEEeccChHHHHHHHHHHHHHH
Confidence 999999999885433322333 78999999999999999999999876 367899999999988899999999999
Q ss_pred HHHHHHHhCCCCCCCCcceeecC-CCCcccccccccceeecceeeecCCCCCHHHHHHHHHHHHHHHHHHHhcCccCccc
Q 006262 247 LGIYTEFFSTPYPLPKLDMVAVS-EFHAGAMENFGLIVYRENELLYNEKTSTANRKQIMAISTSHEVAHQWFGNLVTMEW 325 (653)
Q Consensus 247 l~~~e~~fg~~yp~~kld~V~~P-~~~~game~~Gli~~~e~~ll~~~~~s~~~~~~~~~~~iaHElaHqWfGnlVt~~~ 325 (653)
+++++++|| |||++|+|+|++| +|+.|||||||+ +|.+..++.++. ....+||||+|||||||+||++|
T Consensus 246 l~~~e~~fG-~YP~~k~d~v~~p~~f~~GgMEn~gl-tf~~~~ll~~~~--------~~~~viaHElaHqWfGnlVT~~~ 315 (605)
T 3cia_A 246 IDKAEQMYG-KYRWGRYDLLMLPPSFPFGGMENPRL-SFITPTVVAGDK--------SLVNLIAHELAHSWSGNLVTNES 315 (605)
T ss_dssp HHHHHHHHC-CCTTSCEEEEECCTTCSSSEECCTTE-EEECGGGCCSSS--------CSTHHHHHHHHHTTBTTTEEESS
T ss_pred HHHHHHHhC-CCCCccccEEEECCccCCCcccCCcE-EEecchhccCcH--------HHHHHHHHHHHHHhhccccccCc
Confidence 999999999 9999999999995 999999999998 566665666543 13579999999999999999999
Q ss_pred cchhHhhhhHHHHHHHHHHhhhCCchhh--HHHHHHHhh-hhhccccc-cCCCCceeecCChhhhhhhcccccchhhhHH
Q 006262 326 WTHLWLNEGFATWISYMATDIMFPEWKM--WTQFLRQTS-HGLRLDAQ-EQSHPIEVEVHRADEIDQVFDAISYNKGSAV 401 (653)
Q Consensus 326 w~d~WL~EGfA~y~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~D~~-~~~~p~~~~~~~~~~~~~~f~~i~Y~Kg~~v 401 (653)
|+|+|||||||+|++++++++.+|++.. ...+....+ ..+ +++ ..++|+...+. ..+++..|+.++|.||+++
T Consensus 316 W~dlWLnEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~l--~~~~~~~~pl~~~~~-~~~~~~~f~~i~Y~KGa~v 392 (605)
T 3cia_A 316 WRDLWLNEGFTSYVENRIMEAVFGTDRAVMEQALGAQDLNAEI--LELDASDTQLYIDLK-GRDPDDAFSGVPYVKGQLF 392 (605)
T ss_dssp TTSTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH--HHSCTTTTSSSCCCT-TCCTTTSCCSHHHHHHHHH
T ss_pred chHhHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHH--HhhccCCCCcccCCC-CCChhHhhCccchhHHHHH
Confidence 9999999999999999999999997532 111111111 122 444 66788766554 2455678999999999999
Q ss_pred HHHHHHhhCHHHHHHHHHHHHHhcccCCCChHHHHHHHHhhcCC----CHHH-HHHHHhcCCCcceEEEEEeCCEEEEEE
Q 006262 402 IRMLQSYLGEDIFQKSLSLYMKKYAWKNVETEDLWSVLSEESGI----NITS-LMECWTKQKGHPVVYVNCKDNLLEFKQ 476 (653)
Q Consensus 402 l~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~sg~----~l~~-~~~~W~~~~G~P~l~v~~~~~~i~l~Q 476 (653)
|+||+..||++.|+++||.|+++|++++++++|||+++++++|. ++.. +|++|++++|+|+++++.+.+.+. +
T Consensus 393 l~mL~~~lG~e~F~~~lr~yl~~~~~~~~t~~df~~~l~~~~~~~~~~~l~~~~~~~W~~~~G~P~~~~~~~~~~~~--~ 470 (605)
T 3cia_A 393 LMYLEEKFGRERFDAFVLEYFDSHAFQSLGTDNFVKYLKANLTDKYPNIVSDNEINEWIFKAGLPSYAPQPTSNAFK--V 470 (605)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHTTTEEECHHHHHHHHHHTTTTTSTTSSCHHHHHHHHHSSSCCSSSCCCCCHHHH--H
T ss_pred HHHHHHHhChHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHhccccccccchhhHHHHhcCCCCCceeccCCchHHH--H
Confidence 99999999999999999999999999999999999999999875 5655 799999999999998765432100 0
Q ss_pred EeeecCCCCCCCeeEEEEEEEECCcccceeeEeecceeEEEecCCCCCCCCccccccccCCCceEEeccCceeEEEEEcC
Q 006262 477 SQFVSSGLQGDGRWTIPITLSLGSYNNQRNFLLESQSQSVDISEMLPSSDGKLCSFKECDETLWIKVNVEQSGFYRVIYD 556 (653)
Q Consensus 477 ~rf~~~~~~~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~wi~~N~~~~gyyrV~Yd 556 (653)
...-...|+.... . . ..+.|++|+
T Consensus 471 ------------------------~~~l~~~w~~~~~----------------------~--~--------~~~~~~~~~ 494 (605)
T 3cia_A 471 ------------------------IDKQINQLVTDEL----------------------T--L--------EQLPTAQWT 494 (605)
T ss_dssp ------------------------HHHHTCCTTTTSS----------------------C--C--------SCSGGGGCC
T ss_pred ------------------------HHHHHHHHHhcCC----------------------C--c--------cccchhhCC
Confidence 0000001111100 0 0 112389999
Q ss_pred HHHHHHHHHHHHcCCCChhcHHHHHHHHHHHHHcCCCCHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHH
Q 006262 557 DELSARLRKAVENNCLSAADKLGILDDMLALCQACKQPLSYLLLLLDAHRKEHDSMVLSKLINVCYDVVEI 627 (653)
Q Consensus 557 ~~~w~~l~~~l~~~~i~~~~ra~li~D~~~l~~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~~~~~ 627 (653)
..+|..++++|.. .|+ .+|+++|||+|+|+.++.. ++.+..++++.+|.++.+|..+...|..+.++
T Consensus 495 ~~~~~~~l~~l~~-~l~-~~~~~~l~~~~~~~~~~n~--ei~~~~~~~~~~~~~~~~~~~~~~~l~~~gr~ 561 (605)
T 3cia_A 495 LHEWLHFINNLPV-DLD-HQRMVNLDKAFDLTNSSNA--EIAHAWYLLSVRADYKEVYPAMAKYLKSIGRR 561 (605)
T ss_dssp SHHHHHHHHHSCS-CCT-TC-CHHHHHHHCCSSCSSH--HHHHHHHHHHHHHTCGGGHHHHHHHHHHCCCS
T ss_pred HHHHHHHHHhcCc-cCC-HHHHHHHHHhhCCCcCCCH--HHHHHHHHHHHhcCChhHHHHHHHHHHHcCCc
Confidence 9999999999986 688 9999999999998887654 68899999999999999999999888776544
No 9
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...
Probab=100.00 E-value=3.6e-83 Score=720.98 Aligned_cols=444 Identities=22% Similarity=0.339 Sum_probs=383.1
Q ss_pred CCCCCCc-eeeEEEEEEEEccCCceEEEEEEEEEEEecc-cCEEEEEecCceeEEEEEEecCCcccccccee----ecCC
Q 006262 14 ARLPKFA-IPSYYDLYIKLDLVACTFSGNVNININIIEK-TNFIVLNALELNVHEVLFTSSHNQEYRPSDAI----MDKD 87 (653)
Q Consensus 14 ~rLp~~~-~p~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~-~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~----~~~~ 87 (653)
+..|..+ ++.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+.+|+|++|.+++ +...+. .+..
T Consensus 7 ~a~p~~~~rv~Hy~L~l~vD~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~L~I~~V~v~g------~~~~~~~~~~~~~~ 80 (608)
T 3u9w_A 7 LASPASVCRTKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVING------QEVKYALGERQSYK 80 (608)
T ss_dssp CSCCTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECSTTEEEEEEEESSCEEEEEEETT------EECCEEECCCCGGG
T ss_pred ccCcccCCCceEEEEEEEEECCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEECC------EEcceecccccccc
Confidence 4578775 7999999999999999999999999999876 58999999999999999863 112222 2335
Q ss_pred CcEEEEEeccCccce-eEEEEEEEEeeecCCCcceEEeeee-cCCeeeeeeecccccCCCCeeeeecCCCCCeeEEEEEE
Q 006262 88 DEILVLVFDEPLAVG-EGILRIIFYGKLNEHTKGFYKCSYV-EKEVKKNMAVTQFEAVDARRCFPCWDEPALKATFKITL 165 (653)
Q Consensus 88 ~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~y~~~y~-~~g~~~~~~~T~~ep~~Ar~~fPc~DeP~~ka~f~l~i 165 (653)
++.+.|.++.++++| .++|+|.|+|+++.. |++...+. .+|..+++++|||||.+||+||||||+|++||+|+++|
T Consensus 81 ~~~l~I~l~~~l~~g~~~~l~I~y~~~~~~~--~~~~~~~~~~~g~~~~~~~Tq~ep~~AR~~fPc~D~P~~Katf~i~I 158 (608)
T 3u9w_A 81 GSPMEISLPIALSKNQEIVIEISFETSPKSS--ALQWLTPEQTSGKEHPYLFSQCQAIHCRAILPCQDTPSVKLTYTAEV 158 (608)
T ss_dssp CEEEEEEEEEEECTTCEEEEEEEEECCTTCT--TEEEECGGGSSSSSSCEEEECCTTTTGGGTSCBCCSTTCCEEEEEEE
T ss_pred CceEEEEcCCCCCCCCEEEEEEEEEEEcCCC--ceeeecccccCCCcceEEEEcccCCCCCEEEEecCccceeEEEEEEe
Confidence 678999999999999 899999999987654 55554443 35777888999999999999999999999999999999
Q ss_pred EeCCCCeEEecCcccceee---cCCEEEEEEEeCCcccceEEEEEEecceeeeecccCCeEEEEEecCCCcchhHHHHHH
Q 006262 166 DIPSELTALSNMPILDEKL---NGNLKTVYFEESPVMSTYLVAFVVGLFDHIEDTTTNGVKVHVYCPVGKSSEGKHALDV 242 (653)
Q Consensus 166 ~~p~~~~~~sn~~~~~~~~---~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~ 242 (653)
++|++++|+|||++..+.. ++++++++|..++|||+|++||+||+|+..+ .|+++++|++|+..+.+.++++.
T Consensus 159 ~~p~~~~alsng~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~----~~~~~~v~~~p~~~~~~~~~~~~ 234 (608)
T 3u9w_A 159 SVPKELVALMSAIRDGETPDPEDPSRKIYKFIQKVPIPCYLIALVVGALESRQ----IGPRTLVWSEKEQVEKSAYEFSE 234 (608)
T ss_dssp EEETTSEEEESSEEEEEEECTTCTTEEEEEEEEEEEECGGGCCEEEESCEEEE----EETTEEEEECHHHHHHHHHHTTT
T ss_pred eCCcceeeeeeccccceeeccCCCCeEEEEEEecCCcccEEEEEEEeeeeeEe----cCCceEEEeChhhHHHHHHHHHH
Confidence 9999999999998876532 3568899999999999999999999998665 35778999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCcceeec-CCCCcccccccccceeecceeeecCCCCCHHHHHHHHHHHHHHHHHHHhcCcc
Q 006262 243 AIKSLGIYTEFFSTPYPLPKLDMVAV-SEFHAGAMENFGLIVYRENELLYNEKTSTANRKQIMAISTSHEVAHQWFGNLV 321 (653)
Q Consensus 243 ~~~~l~~~e~~fg~~yp~~kld~V~~-P~~~~game~~Gli~~~e~~ll~~~~~s~~~~~~~~~~~iaHElaHqWfGnlV 321 (653)
+.+++++||++|| |||++++++|++ |+|+.|||||||+++++++.++.+.. +..+||||+|||||||+|
T Consensus 235 ~~~~l~~~e~~~g-~Yp~~~~~~vv~~p~f~~GgMEn~gl~~~~~~~l~~~~~---------~~~viaHElAHqWfGnlV 304 (608)
T 3u9w_A 235 TESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKS---------LSNVIAHEISHSWTGNLV 304 (608)
T ss_dssp HHHHHHHHHHHHC-CCCSSCCEEEECCTTCSSSEECCTTEEEECGGGCCSSST---------TTHHHHHHHHTTTBTTTE
T ss_pred HHHHHHhHHhcCC-CCCchhhceeeecccccchhhhcCcceeeeeeeecccch---------hHHHHHHHhhhhhhcCcC
Confidence 9999999999999 999999999888 79999999999999999996555443 456899999999999999
Q ss_pred CccccchhHhhhhHHHHHHHHHHhhhCCchhhHHHHHHHhh-hhhccccccCCCCceeecCChhhh--hhhcccccchhh
Q 006262 322 TMEWWTHLWLNEGFATWISYMATDIMFPEWKMWTQFLRQTS-HGLRLDAQEQSHPIEVEVHRADEI--DQVFDAISYNKG 398 (653)
Q Consensus 322 t~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~p~~~~~~~~~~~--~~~f~~i~Y~Kg 398 (653)
|++||+|+|||||||+|++++++++++|++.....+..... .....|....++|+..++.+..++ +..|+.++|.||
T Consensus 305 T~~~W~d~WLnEGfAty~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~f~~i~Y~KG 384 (608)
T 3u9w_A 305 TNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVPYEKG 384 (608)
T ss_dssp EESSGGGHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCGGGSSSCCCTTCCHHHHCSSHHHHHH
T ss_pred ccccccchhHHHhHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHhhhhccCCccccccccccCChhhcccHHHHhHH
Confidence 99999999999999999999999999998766655544433 234567778889988777665544 458999999999
Q ss_pred hHHHHHHHHhhC-HHHHHHHHHHHHHhcccCCCChHHHHHHHHhhcCCCHHHH----HHHHhcCCCcceEEEEEeC----
Q 006262 399 SAVIRMLQSYLG-EDIFQKSLSLYMKKYAWKNVETEDLWSVLSEESGINITSL----MECWTKQKGHPVVYVNCKD---- 469 (653)
Q Consensus 399 ~~vl~mL~~~lG-~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~sg~~l~~~----~~~W~~~~G~P~l~v~~~~---- 469 (653)
+++||||+..|| ++.|+++||.|+++|++++++++|||+++++++|.+++.+ |++|++++|+|+++|+++.
T Consensus 385 a~vL~mL~~~lG~~~~F~~~lr~Yl~~~~~~~~tt~Df~~~l~~~~~~~~~~~~~~~~~~W~~~~G~P~v~v~~d~~~~~ 464 (608)
T 3u9w_A 385 FALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVDWNAWLYSPGLPPIKPNYDMTLTN 464 (608)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHTGGGHHHHHTSCHHHHHHCCSSCSSCCCCCCTTTH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhccccchhhHHHHHHHhcCCCCCceeeeecccccc
Confidence 999999999998 6889999999999999999999999999999999999888 9999999999999998765
Q ss_pred CEEEEEEEee
Q 006262 470 NLLEFKQSQF 479 (653)
Q Consensus 470 ~~i~l~Q~rf 479 (653)
..+.++|+++
T Consensus 465 ~~~~l~q~~~ 474 (608)
T 3u9w_A 465 ACIALSQRWI 474 (608)
T ss_dssp HHHHHHHHHH
T ss_pred ceeeHHhHHh
Confidence 2456667543
No 10
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*
Probab=100.00 E-value=3.5e-82 Score=714.55 Aligned_cols=542 Identities=19% Similarity=0.261 Sum_probs=417.1
Q ss_pred CCCCCCCceeeEEEEEEEEccCCceEEEEEEEEEEEecc----cCEEEEEecCceeEEEEEEecCCccccccceeecC--
Q 006262 13 QARLPKFAIPSYYDLYIKLDLVACTFSGNVNININIIEK----TNFIVLNALELNVHEVLFTSSHNQEYRPSDAIMDK-- 86 (653)
Q Consensus 13 ~~rLp~~~~p~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~----~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~-- 86 (653)
.+|+|..+.|.||+|+|++|+++.+|+|+++|++.+.++ ++.|+||+.+|+|.+|.+++ ....+..+.
T Consensus 21 ~~~~p~~~~~~hY~L~l~~d~~~~~~~G~v~I~~~~~~~~~~~~~~i~Ld~~~l~I~~v~v~g------~~~~~~~~~~~ 94 (632)
T 2xq0_A 21 TLSNYKDFAVLHTDLNLSVSFEKSAISGSVTFQLKKLHEGKNKSDELHLDTSYLDVQEVHIDG------SKADFQIEQRK 94 (632)
T ss_dssp CCSCGGGEEEEEEEEEEEEETTTTEEEEEEEEEEEECC---CCCCEEEEBCSSEEEEEEEETT------EECCEEECCCB
T ss_pred cccCCCceeEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCcCcEEEEEccCCEEEEEEECC------eecceEEcccc
Confidence 468999999999999999999999999999999999876 79999999999999998842 122333332
Q ss_pred --CCcEEEEEeccCccceeEEEEEEEEeeecCCCcceEEeee-ecCCeeeeeeecccccCCCCeeeeecCCCCCeeEEEE
Q 006262 87 --DDEILVLVFDEPLAVGEGILRIIFYGKLNEHTKGFYKCSY-VEKEVKKNMAVTQFEAVDARRCFPCWDEPALKATFKI 163 (653)
Q Consensus 87 --~~~~l~i~l~~~l~~g~~~l~i~y~g~~~~~~~G~y~~~y-~~~g~~~~~~~T~~ep~~Ar~~fPc~DeP~~ka~f~l 163 (653)
.++.++|.++++ .+.++|+|.|+|.++. .|++.... ..+|. +++++|||||.+||+||||||+|++||+|++
T Consensus 95 ~~~~~~l~I~l~~~--g~~~~l~I~Y~g~~~~--~gl~~~~~~~~~g~-~~~~~Tq~ep~~AR~~fPc~D~P~~Katf~i 169 (632)
T 2xq0_A 95 EPLGSRLVINNASC--NDNFTLNIQFRTTDKC--TALQWLNSKQTKGG-KPYVFSQLEAIHARSLFPCFDTPSVKSTFTA 169 (632)
T ss_dssp TTTBCCEEEECCCS--SSEEEEEEEEEECTTC--SSEEEECTTTSTTS-SCEEEECCTTTTGGGTSCBCCSTTCCEEEEE
T ss_pred cccCcEEEEEecCC--CCEEEEEEEEeeecCc--CcceeecccccCCC-ceEEEeccccCCcceeeeecCCcccceEEEE
Confidence 357899998876 2389999999999765 45543322 22455 7888999999999999999999999999999
Q ss_pred EEEeCCCCeEEecCcccceeecCCEEEEEEEeCCcccceEEEEEEecceeeeecccCCeEEEEEecCCCcchhHHHHH-H
Q 006262 164 TLDIPSELTALSNMPILDEKLNGNLKTVYFEESPVMSTYLVAFVVGLFDHIEDTTTNGVKVHVYCPVGKSSEGKHALD-V 242 (653)
Q Consensus 164 ~i~~p~~~~~~sn~~~~~~~~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~-~ 242 (653)
+|++| +.|++||..+.....+ ..+++|+.++|||+|++||+||+|...+. |+++++|++|+..+.++++++ .
T Consensus 170 ~I~~p--~~vv~sg~~~~~~~~~-~~~~~F~~t~pmstYLva~~vg~f~~~~~----g~~~~v~~~p~~~~~~~~~~~~~ 242 (632)
T 2xq0_A 170 SIESP--LPVVFSGIRIEDTSKD-TNIYRFEQKVPIPAYLIGIASGDLSSAPI----GPRSTVYTEPFRLKDCQWEFEND 242 (632)
T ss_dssp EEECS--SCEEESSEECCCC-----CEEEEEEEEEECGGGCCEEESSCEEEEE----ETTEEEEECHHHHHHHHHHHTTT
T ss_pred EEEEc--hHHhccCccccceecC-CCeEEEEeCCccchhheeeeEecceeecc----CCeeEEEEccchHHHHHHHHHHH
Confidence 99999 9998776443332212 23789999999999999999999998762 567999999998888889998 9
Q ss_pred HHHHHHHHHHHhCCCCCCCCcceeec-CCCCcccccccccceeecceeeecCCCCCHHHHHHHHHHHHHHHHHHHhcCcc
Q 006262 243 AIKSLGIYTEFFSTPYPLPKLDMVAV-SEFHAGAMENFGLIVYRENELLYNEKTSTANRKQIMAISTSHEVAHQWFGNLV 321 (653)
Q Consensus 243 ~~~~l~~~e~~fg~~yp~~kld~V~~-P~~~~game~~Gli~~~e~~ll~~~~~s~~~~~~~~~~~iaHElaHqWfGnlV 321 (653)
+.+++++||++|| |||++|+|+|++ |+|+.|||||||++ |.+..++.++. ....+||||+|||||||+|
T Consensus 243 ~~~~l~~~e~~fG-pYP~~k~d~v~~pp~f~~GgMEn~glt-~~~~~ll~~~~--------~~~~viaHElAHqWfGnlV 312 (632)
T 2xq0_A 243 VEKFIQTAEKIIF-EYEWGTYDILVNVDSYPYGGMESPNMT-FATPTLLAHDR--------SNIDVIAHELAHSWSGNLV 312 (632)
T ss_dssp HHHHHHHHHHHSC-CCCSSCCCEEECCTTCCSSEECCTTCE-EECGGGCCSSS--------CSTHHHHHHHHHTTBTTTE
T ss_pred HHHHHHHHHHhcc-cCCcccccEEEECCCCCCCccccceEE-EeeceeccCch--------hHHHHHHHHHHHHHhcCCC
Confidence 9999999999999 999999999999 59999999999985 55554665543 1457999999999999999
Q ss_pred CccccchhHhhhhHHHHHHHHHHhhhCCchhh--HHHHHHHhh-hhhccccccCCCC---ceeecCChhhhhhhcccccc
Q 006262 322 TMEWWTHLWLNEGFATWISYMATDIMFPEWKM--WTQFLRQTS-HGLRLDAQEQSHP---IEVEVHRADEIDQVFDAISY 395 (653)
Q Consensus 322 t~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~D~~~~~~p---~~~~~~~~~~~~~~f~~i~Y 395 (653)
|++||+|+|||||||+|++++++++.+|++.. ...+..+.. .+ +|++..++| +...+.+..++...|+.++|
T Consensus 313 T~~~W~dlWLnEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~--l~~~~~~~pl~~l~~~~~~~~~~~~~f~~i~Y 390 (632)
T 2xq0_A 313 TNCSWNHFWLNEGWTVYLERRIIGAIHGEPTRHFSALIGWSDLQNS--IDSMKDPERFSTLVQNLNDNTDPDDAFSTVPY 390 (632)
T ss_dssp EESSGGGTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH--HHTCSSHHHHTSSSCCCCSSSCGGGGCSSHHH
T ss_pred ccCCcchhhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH--HHhcccCCCCcccccCCCCCCChHHhccchhh
Confidence 99999999999999999999999999998642 211111111 22 245555677 43344334556778999999
Q ss_pred hhhhHHHHHHHHhhCH-HHHHHHHHHHHHhcccCCCChHHHHHHHHhhcC---CCHHH-HHHHHhcCCCcceEEEEEeCC
Q 006262 396 NKGSAVIRMLQSYLGE-DIFQKSLSLYMKKYAWKNVETEDLWSVLSEESG---INITS-LMECWTKQKGHPVVYVNCKDN 470 (653)
Q Consensus 396 ~Kg~~vl~mL~~~lG~-~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~sg---~~l~~-~~~~W~~~~G~P~l~v~~~~~ 470 (653)
.||+++|+||+..||+ +.|+++|+.|+++|++++++++|||+++++++| .++.. +|++|++++|+|+ +++.+.+
T Consensus 391 ~KGa~vL~mL~~~lG~~e~F~~~Lr~Yl~~~~~~~~tt~Df~~~l~~~~~~~~~~l~~~~~~~W~~~~G~P~-~~~~~~~ 469 (632)
T 2xq0_A 391 EKGFNLLFHLETILGGKAEFDPFIRHYFKKFAKKSLDTFQFLDTLYEFYPEKKEILDSVDWETWLYKPGMPP-RPHFITA 469 (632)
T ss_dssp HHHHHHHHHHHHHTTSHHHHHHHHHHHHHHTTTEEECHHHHHHHHHHHCGGGHHHHHTSCHHHHHHCCSCCC-CCCCCCH
T ss_pred HHHHHHHHHHHHHhCChHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHhhhccccccHHHHHHHhcCCCCCC-CcCCCch
Confidence 9999999999999999 999999999999999999999999999999987 46776 7999999999999 6654431
Q ss_pred E----EEEEEEeeecCCCCCCCeeEEEEEEEECCcccceeeEeecceeEEEecCCCCCCCCccccccccCCCceEEeccC
Q 006262 471 L----LEFKQSQFVSSGLQGDGRWTIPITLSLGSYNNQRNFLLESQSQSVDISEMLPSSDGKLCSFKECDETLWIKVNVE 546 (653)
Q Consensus 471 ~----i~l~Q~rf~~~~~~~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~wi~~N~~ 546 (653)
. ..+.| .|....+ ..... ..+ . . .++. .+ ..
T Consensus 470 ~~~~~~~l~~------------~w~~~~~---~~~~~-~~~--~---~--~~~~-----------------~d-----~~ 504 (632)
T 2xq0_A 470 LADNVYQLAD------------KWVEMAQ---HLKTT-EDF--R---S--EFNA-----------------ID-----IK 504 (632)
T ss_dssp HHHHHHHHHH------------HHHHHTT---TCCSH-HHH--H---H--HCCG-----------------GG-----GT
T ss_pred HHHHHHHHHH------------HHHhccc---ccccc-ccc--c---c--CCCH-----------------HH-----Hh
Confidence 0 01111 1211000 00000 000 0 0 0110 11 11
Q ss_pred ceeEEEEEcCHHHHHHHHHHHHcC------------CCChhcHHHHHHHHHH--HHHcCCCCHHHHHHHHHhhhcCCCHH
Q 006262 547 QSGFYRVIYDDELSARLRKAVENN------------CLSAADKLGILDDMLA--LCQACKQPLSYLLLLLDAHRKEHDSM 612 (653)
Q Consensus 547 ~~gyyrV~Yd~~~w~~l~~~l~~~------------~i~~~~ra~li~D~~~--l~~~g~l~~~~~l~l~~~l~~E~~~~ 612 (653)
+|+...|..+++.|..+ .++ .+|+++|+|+|+ |+.++. .++.+..++++.++....
T Consensus 505 -------~~~~~~~~~fl~~l~~~~~~~~~~~~~~~~l~-~~~~~~l~~~~~~~~~~~~n--~ei~~~~~~~~~~~~~~~ 574 (632)
T 2xq0_A 505 -------DFNSNQLVLFLETLTQNGHSNKKPKDFDWAKF-PVASRALLDIYQDNIVKSQN--AEVVFKMFKFQIFAKLQE 574 (632)
T ss_dssp -------TCCHHHHHHHHHHHHTTCSSTTSCSCCCGGGC-HHHHHHHHHHTCCCCCTCCC--HHHHHHHHHHHHHTTCGG
T ss_pred -------hCCHHHHHHHHHHHHhcccccccccccCCCCC-HHHHHHHHHHHhhhhccCcC--HHHHHHHHHHHHhcCChh
Confidence 78999999999999742 356 899999999998 666554 489999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccChhhHHHHHHH
Q 006262 613 VLSKLINVCYDVVEIITDAMPDAVNELKDF 642 (653)
Q Consensus 613 ~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 642 (653)
+|..+...|..+.++..-. | .|..+.++
T Consensus 575 ~~~~~~~~l~~~gr~k~~~-p-~y~~l~~~ 602 (632)
T 2xq0_A 575 EYKHLADWLGTVGRMKFVR-P-GYRLLNSV 602 (632)
T ss_dssp GHHHHHHHTTTCCCHHHHH-H-HHHHHHTT
T ss_pred HHHHHHHHHHHcCCeeEeh-h-hHHHHHhh
Confidence 9999999888776553322 3 45555443
No 11
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.4e-33 Score=298.78 Aligned_cols=177 Identities=19% Similarity=0.339 Sum_probs=152.1
Q ss_pred CcceEEEEEeCCEEEEEEEeeecCCCC---CCCeeEEEEEEEECCcccceeeEeecceeEEEecCCCCCCCCcccccccc
Q 006262 459 GHPVVYVNCKDNLLEFKQSQFVSSGLQ---GDGRWTIPITLSLGSYNNQRNFLLESQSQSVDISEMLPSSDGKLCSFKEC 535 (653)
Q Consensus 459 G~P~l~v~~~~~~i~l~Q~rf~~~~~~---~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 535 (653)
|||+|+|+++++.++|+|+||+.++.. .+..|+|||+|++++++....+|++.++.++.++.
T Consensus 1 GyPvvtV~~~~~~~~l~Q~RFl~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~l~~--------------- 65 (419)
T 3rjo_A 1 GFPLITITVRGRNVHMKQEHYMKGSDGAPDTGYLWHVPLTFITSKSDMVHRFLLKTKTDVLILPE--------------- 65 (419)
T ss_dssp CEEEEEEEEETTEEEEEEEEEC----------CCCCEEEEEEESSCSSCEEEEECSSEEEEECSS---------------
T ss_pred CCCEEEEEECCCEEEEEEeeccCCCCCCCCCCeEEEEEEEEEeCCCCccceEEEecCceEEEcCC---------------
Confidence 899999999889999999999986643 23589999999987655445678887777776642
Q ss_pred CCCceEEeccCceeEEEEEcCHHHHHHHHHHHHc--CCCChhcHHHHHHHHHHHHHcCCCCHHHHHHHHHhhhcCCCHHH
Q 006262 536 DETLWIKVNVEQSGFYRVIYDDELSARLRKAVEN--NCLSAADKLGILDDMLALCQACKQPLSYLLLLLDAHRKEHDSMV 613 (653)
Q Consensus 536 ~~~~wi~~N~~~~gyyrV~Yd~~~w~~l~~~l~~--~~i~~~~ra~li~D~~~l~~~g~l~~~~~l~l~~~l~~E~~~~~ 613 (653)
+ ++||++|.+++||||||||+++|++|+++|.. ..||+.||||||+|+|+||++|+++++.+|+|++||++|++|+|
T Consensus 66 ~-~~wi~~N~~~~GyYRVnYd~~~w~~L~~~L~~~~~~i~~~dRa~LidD~~~La~ag~~~~~~~l~l~~yL~~E~~y~~ 144 (419)
T 3rjo_A 66 E-VEWIKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMP 144 (419)
T ss_dssp C-CSCEEEEESSSSCCEEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHGGGGGCCSHHH
T ss_pred C-CceEEEeCCccceEEEEeCHHHHHHHHHHHhhCCccCCHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcccchHHH
Confidence 2 58999999999999999999999999999975 38999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccC-hhhHHHHHHHHHHhccccc
Q 006262 614 LSKLINVCYDVVEIITDAM-PDAVNELKDFSSVSSNLLL 651 (653)
Q Consensus 614 w~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 651 (653)
|.+++..|.++..++.+.. ++.++.|++|+..++.|+.
T Consensus 145 w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 183 (419)
T 3rjo_A 145 VFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLI 183 (419)
T ss_dssp HHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHH
Confidence 9999999999999987532 5679999999999887764
No 12
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=99.96 E-value=2.2e-28 Score=271.93 Aligned_cols=295 Identities=14% Similarity=0.166 Sum_probs=201.6
Q ss_pred CeeEEEEEEEeCCC---CeEEecCcccceeecCCEEEEEEEeCC---c-ccceEEEEEEecceeeeecccCCeEEEEEec
Q 006262 157 LKATFKITLDIPSE---LTALSNMPILDEKLNGNLKTVYFEESP---V-MSTYLVAFVVGLFDHIEDTTTNGVKVHVYCP 229 (653)
Q Consensus 157 ~ka~f~l~i~~p~~---~~~~sn~~~~~~~~~~~~~~~~f~~t~---~-mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~ 229 (653)
...+++++|..|++ |.+.+.++....... +. .+|.... . -| -+.+|+|...+ .+..|+++++...
T Consensus 119 ~~~p~~~~i~~P~~~~~W~vaT~L~~~~~~~~-~~--~~f~a~~yd~LvDs----Pv~~G~~~~~~-~~~~g~p~~l~v~ 190 (597)
T 4fgm_A 119 TDLPCELHLHAPPEAPLWKVATGMPRKSGQPH-SW--GCFRADNYDALIDY----PFLIGDLTIEE-FIAHGIKHSLVLS 190 (597)
T ss_dssp TTSCEEEEECCCTTCTTCEEEESSCBCSSCTT-SS--EEEEESSHHHHTTC----CEEEESCEEEE-EEETTEEEEEEEE
T ss_pred cCCcEEEEEECCCCCCcceEEecCCccCCCCC-cc--eEEEcCCHHHHhcc----hhcccCcEEEE-eccCCeEEEEEEE
Confidence 45789999999999 999988876543111 21 2343221 0 11 15678888766 3456888886554
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCCcceeec-CCCCcccccccccce--eecceeeecCCCCCHHHHHHHHH
Q 006262 230 VGKSSEGKHALDVAIKSLGIYTEFFSTPYPLPKLDMVAV-SEFHAGAMENFGLIV--YRENELLYNEKTSTANRKQIMAI 306 (653)
Q Consensus 230 ~~~~~~~~~~l~~~~~~l~~~e~~fg~~yp~~kld~V~~-P~~~~game~~Gli~--~~e~~ll~~~~~s~~~~~~~~~~ 306 (653)
.......+.++..+.+++++++++|| +||++++++++. ++...||||+.+..+ +.+..+.......+.........
T Consensus 191 ~~~~~d~~~~~~~~~~~~~~~~~~fG-~yP~~~Y~fl~~~~~~~~GgmEh~~st~l~~~~~~l~~~~~~~~~~~~~~~~~ 269 (597)
T 4fgm_A 191 GRHYADTSRITADLAKICETQISLFE-EAPFQSYTFLTMVVGNGFGGLEHRNSTALLCSRKDLISAHQYEMNDNYQTFLS 269 (597)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHHHHT-SCSCSEEEEEEEEESSCCEEEECSSEEEEEEEGGGSCCTTCCSCCHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHhC-CCCCCceEEEEEccCCCCcccccCCceEEEeCchhccccccccchhhhhchhh
Confidence 43334568888899999999999999 999999999865 345889999987643 45443322222123345556788
Q ss_pred HHHHHHHHHHhcCccCc-----------cccchhHhhhhHHHHHHHHHHhhhC--CchhhHHHHHHHhhhhhccccccCC
Q 006262 307 STSHEVAHQWFGNLVTM-----------EWWTHLWLNEGFATWISYMATDIMF--PEWKMWTQFLRQTSHGLRLDAQEQS 373 (653)
Q Consensus 307 ~iaHElaHqWfGnlVt~-----------~~w~d~WL~EGfA~y~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~ 373 (653)
+++||++||||||.|++ .||+++||+||||+|++.++..+.- ....+... +......+........
T Consensus 270 liaHE~~H~W~g~~i~p~~~~~~d~~~~~~~~~lWl~EG~t~Y~~~l~~~r~G~~~~~~~~~~-l~~~i~~~~~~~gr~~ 348 (597)
T 4fgm_A 270 LCCHEYFHSWNIKTLKPKAFLPYQLEKESYTEQLWFYEGMTSYFDDYLLHTSGIIDEKRYLKL-LGDTLSRVERGAGQYQ 348 (597)
T ss_dssp HHHHHHHHTTBTTTBCBGGGSSCCCSSCCCCSTHHHHTHHHHHHHHHHHHHTTSSCHHHHHHH-HHHHHHHHHHSGGGGT
T ss_pred hHhhhhheeecccccccccccccccccccccccchhhhhHHHHHHHHHHHHcCCCCHHHHHHH-HHHHHHHhhcCCCccc
Confidence 99999999999988875 4569999999999999998876542 22111111 1122222221222222
Q ss_pred CCceeec-------CChhhhhhhcccccchhhhHHHHHHHHhhCH-----HHHHHHHHHHHHhccc--CCCChHHHHHHH
Q 006262 374 HPIEVEV-------HRADEIDQVFDAISYNKGSAVIRMLQSYLGE-----DIFQKSLSLYMKKYAW--KNVETEDLWSVL 439 (653)
Q Consensus 374 ~p~~~~~-------~~~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~-----~~F~~~l~~yl~~~~~--~~~~~~df~~~l 439 (653)
+|+.... ..+++....+....|.||+++++||+..|++ +.|+++||.|+++|.. ++++++||.+++
T Consensus 349 ~sl~~ss~~aw~~~yr~~~n~~n~~~s~Y~KGalv~~~LD~~lR~~s~g~~sldd~mr~l~~~~~~~~~~~t~~d~~~~~ 428 (597)
T 4fgm_A 349 QSVTESSFLAWTKFYQQNENAPNSIVSYYAKGALIALSLDLMLRLQSDHKLTLARVMKELWHEFGKTSIGTADDTVINWL 428 (597)
T ss_dssp CCHHHHHHTCCCCCTTCCTTHHHHCCCTTHHHHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHTTTTCCBCTTHHHHHH
T ss_pred cChHHcCchhhhccccCCcccCCcccccchHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHhCcCCCCCCHHHHHHHH
Confidence 3332110 0011111222334799999999999888865 4799999999999874 688999999999
Q ss_pred HhhcCCCHHHHHHHHhcCCCcc
Q 006262 440 SEESGINITSLMECWTKQKGHP 461 (653)
Q Consensus 440 ~~~sg~~l~~~~~~W~~~~G~P 461 (653)
++++|.++.+||++|+++++.+
T Consensus 429 e~~sG~dl~~ff~~~l~~t~~~ 450 (597)
T 4fgm_A 429 NQYPGIDISDFLKDALYNKESL 450 (597)
T ss_dssp HTSTTCCCHHHHHHHHHSCSCC
T ss_pred HHhcCcCHHHHHHHHHhCCCCc
Confidence 9999999999999999999864
No 13
>1u4g_A Elastase, pseudolysin; , inhibition, peptidase family M4, hydrolase; HET: HPI; 1.40A {Pseudomonas aeruginosa} SCOP: d.92.1.2 PDB: 1ezm_A* 3dbk_A*
Probab=87.39 E-value=24 Score=34.89 Aligned_cols=98 Identities=15% Similarity=0.242 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCcccccc--c--ccceeecceeeecCCCCCHHHHHHHHHHHHHH
Q 006262 236 GKHALDVAIKSLGIYTEFFSTPYPLPKLDMVAVSEFHAGAMEN--F--GLIVYRENELLYNEKTSTANRKQIMAISTSHE 311 (653)
Q Consensus 236 ~~~~l~~~~~~l~~~e~~fg~~yp~~kld~V~~P~~~~game~--~--Gli~~~e~~ll~~~~~s~~~~~~~~~~~iaHE 311 (653)
+..|.-.+.++.+||.+.|| .-++.- .++..-.+. ...+| | ..++|....-.+.+. . -..+++||
T Consensus 73 ~~DAhy~a~~~~d~y~~~~g-r~~id~-~l~~~Vhyg-~~y~NAfWdG~~M~fGDG~~~~~p~-~-------~lDVv~HE 141 (301)
T 1u4g_A 73 LNDAHFFGGVVFKLYRDWFG-TSPLTH-KLYMKVHYG-RSVENAYWDGTAMLFGDGATMFYPL-V-------SLDVAAHE 141 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-SCSSSS-CEEEEESCT-TTCCCEEECSSCEEECCCCSSBSCS-C-------CHHHHHHH
T ss_pred hHHHHHhHHHHHHHHHHHcC-CCCCCC-ceEEEEecC-CCccCcEecCcEEEeeCCCcccccc-c-------ccceeeec
Confidence 44555577899999999999 556652 333322221 12222 2 123333221111111 1 25789999
Q ss_pred HHHHHhcCccCccccchhH-hhhhHHHHHHHHHH
Q 006262 312 VAHQWFGNLVTMEWWTHLW-LNEGFATWISYMAT 344 (653)
Q Consensus 312 laHqWfGnlVt~~~w~d~W-L~EGfA~y~~~~~~ 344 (653)
++|--.-....+....+-- |||||+..+...+-
T Consensus 142 ~tHGVt~~~agL~y~~eSGaLnEs~SDifG~~ve 175 (301)
T 1u4g_A 142 VSHGFTEQNSGLIYRGQSGGMNEAFSDMAGEAAE 175 (301)
T ss_dssp HHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccceeccccCccccCCccchhHHHHHHHHHHHH
Confidence 9999887776666555555 89999999987654
No 14
>1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2
Probab=80.69 E-value=3.5 Score=40.88 Aligned_cols=104 Identities=17% Similarity=0.263 Sum_probs=55.9
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCCC--cceeecCCCCc-c---cccccccceeecceeeecCCCCC-HHHHHHHHHHH
Q 006262 236 GKHALDVAIKSLGIYTEFFSTPYPLPK--LDMVAVSEFHA-G---AMENFGLIVYRENELLYNEKTST-ANRKQIMAIST 308 (653)
Q Consensus 236 ~~~~l~~~~~~l~~~e~~fg~~yp~~k--ld~V~~P~~~~-g---ame~~Gli~~~e~~ll~~~~~s~-~~~~~~~~~~i 308 (653)
+-.|...+.++.+||.+.|| .-++.- ..++..=.+.. + ..+| -....+.+.|...... ......-..++
T Consensus 67 avdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~Vhyg~~~~~~~y~N---AfWdg~~m~fGdGdg~~f~~~~~~lDVv 142 (301)
T 1bqb_A 67 GVDANYYAKQTYDYYKNTFG-RESYDNHGSPIVSLTHVNHYGGQDNRNN---AAWIGDKMIYGDGDGRTFTNLSGANDVV 142 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-CCSTTSSCCCEEEEECCCEETTEECTTC---EEECSSSEEECCCCSSSBSCGGGCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeeEEEEEeCCCCCCCCccC---cEEcCCEEEEEcCCCcccCCccccccee
Confidence 34566678899999999999 556542 33322111110 0 1122 1222223444332100 00000124789
Q ss_pred HHHHHHHHhcCccCccccchhH-hhhhHHHHHHHHH
Q 006262 309 SHEVAHQWFGNLVTMEWWTHLW-LNEGFATWISYMA 343 (653)
Q Consensus 309 aHElaHqWfGnlVt~~~w~d~W-L~EGfA~y~~~~~ 343 (653)
+||++|--.-....+..-.+-. |||||+.++...+
T Consensus 143 ~HE~tHGVt~~~agl~y~~eSGaLnEs~SDifg~~~ 178 (301)
T 1bqb_A 143 AHEITHGVTQQTANLEYKDQSGALNESFSDVFGYFV 178 (301)
T ss_dssp HHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred eeecccceecccCCCcccCCcCchhHHHHHHHhHhh
Confidence 9999997766555554444444 8999999999753
No 15
>3dnz_A Thermolysin; hydrolase, metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen; HET: LYS; 1.20A {Bacillus thermoproteolyticus} PDB: 1kjo_A* 1kjp_A* 1kkk_A* 1kl6_A* 1kr6_A* 1kro_A* 1ks7_A* 1kto_A* 1y3g_E* 2whz_A* 2wi0_A* 1kei_A* 3do0_A* 3do1_A* 3do2_A* 3fb0_A 3fbo_A 3fgd_A* 3flf_A* 3fv4_A* ...
Probab=78.15 E-value=3.5 Score=41.13 Aligned_cols=102 Identities=12% Similarity=0.077 Sum_probs=57.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCCC--cceeecCCCC---cccccccccceeecce-eeecCCCCCHHHHHHHHHHH
Q 006262 235 EGKHALDVAIKSLGIYTEFFSTPYPLPK--LDMVAVSEFH---AGAMENFGLIVYRENE-LLYNEKTSTANRKQIMAIST 308 (653)
Q Consensus 235 ~~~~~l~~~~~~l~~~e~~fg~~yp~~k--ld~V~~P~~~---~game~~Gli~~~e~~-ll~~~~~s~~~~~~~~~~~i 308 (653)
.+..|...+.++.+||.+.|| .-++.- +.++..=.+. ..|.=+...++|.+-. ..+.+- .....++
T Consensus 69 aavdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~VHyg~~y~NAfW~g~~m~fGDGdg~~f~~~-------~~slDVv 140 (316)
T 3dnz_A 69 PAVDAHYYAGVTYDYYKNVHN-RLSYDGNNAAIRSSVHYSQGYNNAFWNGSQMVYGDGDGQTFIPL-------SGGIDVV 140 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEESCTTTCCCEEECSSCEEECCCCSSSBSCG-------GGCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCceEEEEEecCCCccCceEcCCEEEEeCCCCcccccc-------cccccce
Confidence 345677788999999999999 556642 3333221111 1222223333443321 111111 0124789
Q ss_pred HHHHHHHHhcCccCccccchh-HhhhhHHHHHHHHHH
Q 006262 309 SHEVAHQWFGNLVTMEWWTHL-WLNEGFATWISYMAT 344 (653)
Q Consensus 309 aHElaHqWfGnlVt~~~w~d~-WL~EGfA~y~~~~~~ 344 (653)
+||+.|--.........-.+. =|||+|+..+...+-
T Consensus 141 ~HE~tHgvt~~~agL~y~~esGaLNEs~SDifG~~ve 177 (316)
T 3dnz_A 141 AHELTHAVTDYTAGLIYQNESGAINEAISDIFGTLVE 177 (316)
T ss_dssp HHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeccccccccCCCcccCCccchhHHHHHHHHHHHH
Confidence 999999766554444433333 389999999987654
No 16
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=77.92 E-value=2.2 Score=35.39 Aligned_cols=20 Identities=25% Similarity=0.356 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHhcCc
Q 006262 301 KQIMAISTSHEVAHQWFGNL 320 (653)
Q Consensus 301 ~~~~~~~iaHElaHqWfGnl 320 (653)
..+++.++|||++|-=-++.
T Consensus 80 ~~El~aVlaHElgH~~~~h~ 99 (107)
T 3cqb_A 80 RDEAEAVLAHEVSHIANGDM 99 (107)
T ss_dssp HHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHHHCCCH
Confidence 34688999999999765553
No 17
>4ger_A Gentlyase metalloprotease; metalloproteinase, tissue disaggregation, thermoly protease, hydrolase; HET: LYS; 1.59A {Paenibacillus polymyxa}
Probab=77.45 E-value=3.8 Score=40.60 Aligned_cols=102 Identities=19% Similarity=0.175 Sum_probs=58.2
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCCC--cceeec---CCCCcccccccccceeecce-eeecCCCCCHHHHHHHHHHH
Q 006262 235 EGKHALDVAIKSLGIYTEFFSTPYPLPK--LDMVAV---SEFHAGAMENFGLIVYRENE-LLYNEKTSTANRKQIMAIST 308 (653)
Q Consensus 235 ~~~~~l~~~~~~l~~~e~~fg~~yp~~k--ld~V~~---P~~~~game~~Gli~~~e~~-ll~~~~~s~~~~~~~~~~~i 308 (653)
.+..|...+.++.+||.+.|| .-++.- +.++.. ..-...|.=+...++|.+-. ..+.+- .....++
T Consensus 62 aavdA~~~~~~t~d~y~~~~g-rnsid~~G~~l~~~VHyg~~y~NAfW~g~~m~fGDGdg~~f~~~-------~~slDVv 133 (304)
T 4ger_A 62 AGVDAHTYAAKTYDYYKAKFG-RNSIDGRGLQLRSTVHYGSRYNNAFWNGSQMTYGDGDGSTFIAF-------SGDPDVV 133 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEEEESSSCCCEEECSSCEEEECCCSSSBCCG-------GGSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeEEEEEeCCCCccCceecCCEEEEeCCCCcccccc-------ccccchh
Confidence 455677788999999999999 556542 333221 11111232233334443321 111111 0124789
Q ss_pred HHHHHHHHhcCccCccccchh-HhhhhHHHHHHHHHH
Q 006262 309 SHEVAHQWFGNLVTMEWWTHL-WLNEGFATWISYMAT 344 (653)
Q Consensus 309 aHElaHqWfGnlVt~~~w~d~-WL~EGfA~y~~~~~~ 344 (653)
+||+.|--..+......-.+. =|||+|+..+...+-
T Consensus 134 aHEltHGVt~~ta~L~Y~~qsGaLNEs~SDifG~~ve 170 (304)
T 4ger_A 134 GHELTHGVTEYTSNLEYYGESGALNEAFSDVIGNDIQ 170 (304)
T ss_dssp HHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccccccccCCccccCCccchhHHHHHHHHHHhc
Confidence 999999766654444433333 389999999997765
No 18
>2y3u_A Collagenase, collagenase G; hydrolase, gluzincin, metalloprotease; HET: P6G FLC; 2.55A {Clostridium histolyticum} PDB: 2y50_A* 2y6i_A*
Probab=76.15 E-value=1.1 Score=50.55 Aligned_cols=38 Identities=21% Similarity=0.351 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHhcCccCccccc---------hhHhhhhHHHHHHHH
Q 006262 305 AISTSHEVAHQWFGNLVTMEWWT---------HLWLNEGFATWISYM 342 (653)
Q Consensus 305 ~~~iaHElaHqWfGnlVt~~~w~---------d~WL~EGfA~y~~~~ 342 (653)
.+++.||++|.-=|-..-+..|. -.|+.||||+|++.-
T Consensus 423 ee~f~HEytHyLdgRy~~~G~f~~~~~y~~~~~vW~~EG~AEY~s~~ 469 (785)
T 2y3u_A 423 EELFRHEYTHYLQARYLVDGLWGQGPFYEKNRLTWFDEGTAEFFAGS 469 (785)
T ss_dssp HHHHHHHHHHHHHHHHTSCSSTTSSGGGTTTCSHHHHHHHHHHHTTB
T ss_pred cccccchhhhccccccccccccccCcccccCCCceehhhHHHHHhcC
Confidence 45779999999855333333332 579999999999754
No 19
>2vqx_A Metalloproteinase; thermolysin-like structure, zinc, protease, hydrolase, metalloprotease; 1.82A {Serratia proteamaculans}
Probab=75.87 E-value=18 Score=36.39 Aligned_cols=106 Identities=14% Similarity=0.216 Sum_probs=56.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCCC--cceeecCCCCcccccccccceeecceeeecCCCCCH-HHHHHHHHHHHHH
Q 006262 235 EGKHALDVAIKSLGIYTEFFSTPYPLPK--LDMVAVSEFHAGAMENFGLIVYRENELLYNEKTSTA-NRKQIMAISTSHE 311 (653)
Q Consensus 235 ~~~~~l~~~~~~l~~~e~~fg~~yp~~k--ld~V~~P~~~~game~~Gli~~~e~~ll~~~~~s~~-~~~~~~~~~iaHE 311 (653)
.+..+...+.++.+||.+.|| .-++.- ..++..=.+. ...+| -.+..+.+.|....... .....-..+++||
T Consensus 89 av~~ay~~~~~t~d~y~~~~g-rnsid~~G~~l~~~VHyg-~~y~N---AfWdG~~M~fGDG~g~~f~~~~~~lDVv~HE 163 (341)
T 2vqx_A 89 AVDEAYDYLGVTYDFFWQAFK-RNSLDNQGLPLTGSVHYG-KEYQN---AFWNGQQMVFGDGDGEIFNRFTIAIDVVGHA 163 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCSTTSSCCCEEEEESCS-SSCCC---EEECSSCEEECCCCSSSBCCTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeeEEEEecC-CCccC---ceecCcEeEeeCCCCcccCCcccchhhhhhh
Confidence 355566678899999999999 445532 2233221111 11222 11112223332211000 0000124689999
Q ss_pred HHHHHhcCccCccccchhH-hhhhHHHHHHHHHHh
Q 006262 312 VAHQWFGNLVTMEWWTHLW-LNEGFATWISYMATD 345 (653)
Q Consensus 312 laHqWfGnlVt~~~w~d~W-L~EGfA~y~~~~~~~ 345 (653)
++|--......+..-.+-- |||||+.+++..+-.
T Consensus 164 ltHGVt~~~agL~Y~~eSGaLNEs~SDifG~~ve~ 198 (341)
T 2vqx_A 164 LAHGVTESEAGLIYFQQAGALNESLSDVFGSLVKQ 198 (341)
T ss_dssp HHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccceecccCCccccCCCcchhhHHHHHHHHHHHH
Confidence 9998776555554444444 999999999976643
No 20
>1r55_A ADAM 33; metalloprotease, inhibitor, asthma, hydrolase; HET: NAG MAN 097; 1.58A {Homo sapiens} SCOP: d.92.1.9 PDB: 1r54_A*
Probab=49.50 E-value=24 Score=32.95 Aligned_cols=14 Identities=29% Similarity=0.408 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHH
Q 006262 303 IMAISTSHEVAHQW 316 (653)
Q Consensus 303 ~~~~~iaHElaHqW 316 (653)
..+.++||||+|.+
T Consensus 135 ~~a~~~AHElGHnl 148 (214)
T 1r55_A 135 GAAATMAHEIGHSL 148 (214)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 35789999999986
No 21
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=49.25 E-value=16 Score=35.23 Aligned_cols=20 Identities=20% Similarity=0.121 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHhcCc
Q 006262 301 KQIMAISTSHEVAHQWFGNL 320 (653)
Q Consensus 301 ~~~~~~~iaHElaHqWfGnl 320 (653)
..+++.+||||++|-=-++.
T Consensus 97 ~~ELaaVLaHElgH~~~~H~ 116 (253)
T 3c37_A 97 ETELAGVLAHEINHAVARHG 116 (253)
T ss_dssp HHHHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHHHHCcCH
Confidence 35688999999999765543
No 22
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=46.87 E-value=39 Score=31.13 Aligned_cols=13 Identities=38% Similarity=0.698 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHH
Q 006262 304 MAISTSHEVAHQW 316 (653)
Q Consensus 304 ~~~~iaHElaHqW 316 (653)
.+.++||||+|+.
T Consensus 135 ~a~~~AHElGH~l 147 (202)
T 1yp1_A 135 MAVVMAHELGHNL 147 (202)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 5789999999995
No 23
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=46.17 E-value=48 Score=30.45 Aligned_cols=14 Identities=29% Similarity=0.601 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHH
Q 006262 303 IMAISTSHEVAHQW 316 (653)
Q Consensus 303 ~~~~~iaHElaHqW 316 (653)
..+.++||||+|..
T Consensus 135 ~~a~~~AHElGH~l 148 (202)
T 2w15_A 135 WVAVTMAHELGHNL 148 (202)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhc
Confidence 36789999999995
No 24
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=45.58 E-value=45 Score=30.54 Aligned_cols=13 Identities=46% Similarity=0.741 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHH
Q 006262 304 MAISTSHEVAHQW 316 (653)
Q Consensus 304 ~~~~iaHElaHqW 316 (653)
.+.++||||+|++
T Consensus 133 ~a~~~AHElGH~l 145 (197)
T 1bud_A 133 VAITLAHEMAHNL 145 (197)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhc
Confidence 6789999999996
No 25
>3nqx_A MCP-02, secreted metalloprotease MCP02; zinc metalloprotease, alpha/beta protein, hydrolase; 1.70A {Pseudoalteromonas SP} PDB: 3nqy_B 3nqz_B
Probab=44.84 E-value=2.4e+02 Score=27.75 Aligned_cols=99 Identities=14% Similarity=0.162 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCCCcceeecCCCC---cccccccccceeecceeeecCCCCCHHHHHHHHHHHHHHH
Q 006262 236 GKHALDVAIKSLGIYTEFFSTPYPLPKLDMVAVSEFH---AGAMENFGLIVYRENELLYNEKTSTANRKQIMAISTSHEV 312 (653)
Q Consensus 236 ~~~~l~~~~~~l~~~e~~fg~~yp~~kld~V~~P~~~---~game~~Gli~~~e~~ll~~~~~s~~~~~~~~~~~iaHEl 312 (653)
+..|.-.+.++.+||.++|| .-|+. ..++..-.+. ..|.=+...++|..-.-.+.+- . ...+++||+
T Consensus 74 ~~DAhy~a~~t~d~y~~~~g-r~~id-~~l~~~VHyg~~y~NAfWdg~~m~fGDG~~~~~~~-~-------slDVv~HE~ 143 (306)
T 3nqx_A 74 LNDAHFFGNVIFNMYNDWLG-TAPLS-FQLQMRVHYSSNYENAFWDGSAMTFGDGQNTFYPL-V-------SLDVSAHEV 143 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-SCSSS-SCEEEEEEESSSCCCEEECSSCEEEECCCSSBSCS-C-------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcC-CCCCC-CceEEEEecCCCccCccccCCEEEEeCCCcccccc-c-------ccchhhhhh
Confidence 44555567889999999999 55664 2333221111 1232223334443332111111 1 257899999
Q ss_pred HHHHhcCccCcccc-chhHhhhhHHHHHHHHHH
Q 006262 313 AHQWFGNLVTMEWW-THLWLNEGFATWISYMAT 344 (653)
Q Consensus 313 aHqWfGnlVt~~~w-~d~WL~EGfA~y~~~~~~ 344 (653)
.|--......+..- .--=|||||+..+...+-
T Consensus 144 tHGvt~~~a~l~y~~esGaLnEs~SDifg~~ve 176 (306)
T 3nqx_A 144 SHGFTEQNSGLIYNGKPGGLNEAFSDMAGEAAE 176 (306)
T ss_dssp HHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCccCCCCCcccchHHHHHHHHHH
Confidence 99876554333322 223589999999986653
No 26
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=40.24 E-value=56 Score=34.11 Aligned_cols=14 Identities=36% Similarity=0.717 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHH
Q 006262 303 IMAISTSHEVAHQW 316 (653)
Q Consensus 303 ~~~~~iaHElaHqW 316 (653)
..+.++||||+|++
T Consensus 145 ~~a~t~AHElGHnl 158 (427)
T 2ero_A 145 LVAIAMAHEMGHNL 158 (427)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 46789999999996
No 27
>1atl_A Atrolysin C; metalloendopeptidase, hydrolase-hydrolase inhibitor complex; HET: 0QI; 1.80A {Crotalus atrox} SCOP: d.92.1.9 PDB: 1htd_A 1dth_A* 3aig_A* 2aig_P* 4aig_A* 1iag_A
Probab=37.74 E-value=41 Score=30.99 Aligned_cols=13 Identities=31% Similarity=0.713 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHH
Q 006262 304 MAISTSHEVAHQW 316 (653)
Q Consensus 304 ~~~~iaHElaHqW 316 (653)
.+.++||||+|++
T Consensus 136 ~a~~~AHElGHnl 148 (202)
T 1atl_A 136 MGVTMAHELGHNL 148 (202)
T ss_dssp HHHHHHHHHHHHT
T ss_pred eEEEehhhhcccc
Confidence 6789999999995
No 28
>1qua_A Acutolysin-C, hemorrhagin III; metalloprotease, hemorrhagic toxin, snake venom proteinase; 2.20A {Deinagkistrodon acutus} SCOP: d.92.1.9
Probab=37.06 E-value=42 Score=30.76 Aligned_cols=13 Identities=38% Similarity=0.762 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHH
Q 006262 304 MAISTSHEVAHQW 316 (653)
Q Consensus 304 ~~~~iaHElaHqW 316 (653)
.+.++||||+|++
T Consensus 135 ~a~~~AHElGH~l 147 (197)
T 1qua_A 135 MAVTMAHELGHNL 147 (197)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 6789999999995
No 29
>2ejq_A Hypothetical protein TTHA0227; NPPSFA, national project on protein structural and functional analyses; 2.08A {Thermus thermophilus} SCOP: d.92.1.17
Probab=36.91 E-value=14 Score=31.65 Aligned_cols=28 Identities=14% Similarity=0.092 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCccCccccch
Q 006262 300 RKQIMAISTSHEVAHQWFGNLVTMEWWTH 328 (653)
Q Consensus 300 ~~~~~~~~iaHElaHqWfGnlVt~~~w~d 328 (653)
-...+..++.||+||.+ |.|...+.|+|
T Consensus 85 L~~~V~~tvvHEiaHhf-e~lag~~glsd 112 (130)
T 2ejq_A 85 WEAEVWETMLHELRHHL-ESLAGRDDLVQ 112 (130)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHTTC----
T ss_pred HHHHHHHHHHHHhHHHH-HhhcccCCCCH
Confidence 45568899999999985 55555555543
No 30
>1kuf_A Atrolysin E, metalloproteinase; alpha/beta protein, hydrolase; 1.35A {Protobothrops mucrosquamatus} SCOP: d.92.1.9 PDB: 1kui_A 1kuk_A 1kug_A 1wni_A
Probab=34.67 E-value=44 Score=30.81 Aligned_cols=14 Identities=29% Similarity=0.712 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHH
Q 006262 303 IMAISTSHEVAHQW 316 (653)
Q Consensus 303 ~~~~~iaHElaHqW 316 (653)
..+.++||||+|.+
T Consensus 137 ~~a~~~AHElGH~l 150 (203)
T 1kuf_A 137 MVAVTMTHELGHNL 150 (203)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhHHHHHHHhhhhc
Confidence 36789999999995
No 31
>3k7n_A K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A {Naja atra}
Probab=34.08 E-value=84 Score=32.36 Aligned_cols=14 Identities=29% Similarity=0.603 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHH
Q 006262 303 IMAISTSHEVAHQW 316 (653)
Q Consensus 303 ~~~~~iaHElaHqW 316 (653)
..+.++||||+|..
T Consensus 138 ~~a~t~AHElGHnl 151 (397)
T 3k7n_A 138 LVASTITHELGHNL 151 (397)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhhhhHHHHHHHHc
Confidence 46789999999984
No 32
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=33.12 E-value=97 Score=24.99 Aligned_cols=22 Identities=14% Similarity=0.163 Sum_probs=15.7
Q ss_pred CcEEEEEeccCccceeEEEEEEE
Q 006262 88 DEILVLVFDEPLAVGEGILRIIF 110 (653)
Q Consensus 88 ~~~l~i~l~~~l~~g~~~l~i~y 110 (653)
...+.+.++ +|.+|.|+|.-+-
T Consensus 64 ~~~~~~~l~-~L~~G~YtV~Wrv 85 (102)
T 2c9r_A 64 KTMVITPAS-PLTAGTYKVDWRA 85 (102)
T ss_dssp TEEEEEESS-CCCSEEEEEEEEE
T ss_pred CcEEEEECC-CCCCceEEEEEEE
Confidence 456777775 8999988775443
No 33
>2e3x_A Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=31.99 E-value=39 Score=35.27 Aligned_cols=14 Identities=29% Similarity=0.477 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHH
Q 006262 303 IMAISTSHEVAHQW 316 (653)
Q Consensus 303 ~~~~~iaHElaHqW 316 (653)
.++.++||||+|++
T Consensus 138 ~~a~t~AHElGHnl 151 (427)
T 2e3x_A 138 KTAVIMAHELSHNL 151 (427)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred eeeeehHHHHHHhh
Confidence 46789999999995
No 34
>2dw0_A Catrocollastatin; apoptotic toxin, SVMP, metalloproteinase, apoptosis, toxin; HET: NAG BMA MAN GM6; 2.15A {Crotalus atrox} PDB: 2dw1_A* 2dw2_A* 3dsl_A* 3hdb_A*
Probab=30.58 E-value=52 Score=34.23 Aligned_cols=14 Identities=29% Similarity=0.634 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 006262 303 IMAISTSHEVAHQW 316 (653)
Q Consensus 303 ~~~~~iaHElaHqW 316 (653)
.++.++||||+|++
T Consensus 136 ~~a~t~AHElGHnl 149 (419)
T 2dw0_A 136 VVAVIMAHEMGHNL 149 (419)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhhhhHHHHHHHHc
Confidence 46789999999996
No 35
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=29.39 E-value=1e+02 Score=24.94 Aligned_cols=22 Identities=14% Similarity=0.240 Sum_probs=15.8
Q ss_pred CcEEEEEeccCccceeEEEEEEE
Q 006262 88 DEILVLVFDEPLAVGEGILRIIF 110 (653)
Q Consensus 88 ~~~l~i~l~~~l~~g~~~l~i~y 110 (653)
...+.+.++ +|.+|.|+|.-+-
T Consensus 66 ~~~~~~~l~-~L~~G~YtV~Wrv 87 (104)
T 1lyq_A 66 KSMVIIPRE-PLPAGTYRVDWRA 87 (104)
T ss_dssp TEEEEEESS-CCCSEEEEEEEEE
T ss_pred CcEEEEECC-CCCCceEEEEEEE
Confidence 456777776 8999988775443
No 36
>4fca_A Conserved domain protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 2.06A {Bacillus anthracis}
Probab=29.22 E-value=47 Score=35.67 Aligned_cols=56 Identities=13% Similarity=0.258 Sum_probs=39.1
Q ss_pred hHHHHHHHHhhCHHHHHHHHHHHHHhc--ccCCC---ChHHHHHHHHhhcCCCHHHHHHHH
Q 006262 399 SAVIRMLQSYLGEDIFQKSLSLYMKKY--AWKNV---ETEDLWSVLSEESGINITSLMECW 454 (653)
Q Consensus 399 ~~vl~mL~~~lG~~~F~~~l~~yl~~~--~~~~~---~~~df~~~l~~~sg~~l~~~~~~W 454 (653)
-.++.+|+...|.+.|.+.-+.|=... ..... ..+.|...+++++|.||.+||+.|
T Consensus 318 L~mf~QL~l~fG~~fy~~l~~~yR~~~~~~~p~~~~~k~~~fv~~~S~~ag~nLtpFFe~W 378 (525)
T 4fca_A 318 LVMFWQLHLAYGDQFYPNLHQMYRLLHDTELPKSDEEKKQMFIYMTSKVAGQNLIPFFDKW 378 (525)
T ss_dssp HHHHHHHHHHHCTTHHHHHHHHHHTCCGGGSCCSHHHHHHHHHHHHHHHHTSBCHHHHHHT
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHhccccCCCCCcHHHHHHHHHHHHHHHCCChHHHHHHH
Confidence 456778888889887766666653321 11111 245577888999999999999999
No 37
>3k7l_A Atragin; SVMP, metalloprotease, hydrolase; HET: NAG; 2.50A {Naja atra}
Probab=28.56 E-value=84 Score=32.67 Aligned_cols=14 Identities=36% Similarity=0.719 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHH
Q 006262 303 IMAISTSHEVAHQW 316 (653)
Q Consensus 303 ~~~~~iaHElaHqW 316 (653)
..+.++||||+|..
T Consensus 143 ~~a~t~AHElGHnl 156 (422)
T 3k7l_A 143 MVAITMAHEMGHNL 156 (422)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHc
Confidence 46789999999985
No 38
>2rjq_A Adamts-5; metalloprotease domain, aggrecanase, cleavage on PAIR of BAS residues, extracellular matrix, glycoprotein, hydrolase, ME binding; HET: NAG BAT; 2.60A {Homo sapiens}
Probab=28.07 E-value=1.3e+02 Score=30.68 Aligned_cols=13 Identities=31% Similarity=0.570 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHH
Q 006262 304 MAISTSHEVAHQW 316 (653)
Q Consensus 304 ~~~~iaHElaHqW 316 (653)
.+.++||||+|..
T Consensus 143 ~a~~~AHElGHnl 155 (378)
T 2rjq_A 143 AAFTVAHEIGHLL 155 (378)
T ss_dssp HHHHHHHHHHHHT
T ss_pred hhhhhhhhhhhhc
Confidence 6789999999985
No 39
>3b8z_A Protein adamts-5; alpha/beta, hydrolase; HET: 294; 1.40A {Homo sapiens} PDB: 3hyg_A* 3hy9_A* 3hy7_A* 3ljt_A*
Probab=24.98 E-value=1.6e+02 Score=27.21 Aligned_cols=13 Identities=31% Similarity=0.570 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHH
Q 006262 304 MAISTSHEVAHQW 316 (653)
Q Consensus 304 ~~~~iaHElaHqW 316 (653)
.+.++||||+|..
T Consensus 141 ~a~~~AHElGHnl 153 (217)
T 3b8z_A 141 AAFTVAHEIGHLL 153 (217)
T ss_dssp HHHHHHHHHHHHT
T ss_pred hhhhhHhhhhhhc
Confidence 5789999999985
No 40
>3dte_A IRRE protein; radiotolerance, gene regulation, metallopeptidase; 2.60A {Deinococcus deserti} PDB: 3dti_A 3dtk_A
Probab=23.71 E-value=74 Score=31.38 Aligned_cols=31 Identities=23% Similarity=0.506 Sum_probs=22.0
Q ss_pred HHHHhhcCCCHHHHHHHHhcCCCcceEEEEE
Q 006262 437 SVLSEESGINITSLMECWTKQKGHPVVYVNC 467 (653)
Q Consensus 437 ~~l~~~sg~~l~~~~~~W~~~~G~P~l~v~~ 467 (653)
..|.+..|.....+..++..-..+|.+-|..
T Consensus 165 ~~LA~~FgVS~eav~~RL~~l~~~p~~~vv~ 195 (301)
T 3dte_A 165 AELARRADVSATSALYALAERTAPPVIYAVC 195 (301)
T ss_dssp HHHHHHHTCCHHHHHHHHHHTCCSCEEEEEE
T ss_pred HHHHHHHCCCHHHHHHHHHhcCCCCEEEEEe
Confidence 3455556778888888888888899765544
No 41
>4dd8_A Disintegrin and metalloproteinase domain-containi 8; batimastat, inflammation, alpha/beta motif, metalloproteinas allergic asthma, tumorigenesis; HET: BAT; 2.10A {Homo sapiens}
Probab=23.59 E-value=1.5e+02 Score=27.23 Aligned_cols=14 Identities=29% Similarity=0.432 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHH
Q 006262 303 IMAISTSHEVAHQW 316 (653)
Q Consensus 303 ~~~~~iaHElaHqW 316 (653)
.++.++|||++|..
T Consensus 132 ~~a~~~AHElGH~l 145 (208)
T 4dd8_A 132 GVACTMAHEMGHNL 145 (208)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHc
Confidence 35789999999984
No 42
>2v4b_A Adamts-1; zymogen, protease, hydrolase, metalloprotease, heparin-binding, metalloproteinase, metzincin, glycoprotein metal-binding; 2.00A {Homo sapiens} PDB: 2jih_A 3q2g_A* 3q2h_A*
Probab=23.57 E-value=81 Score=30.96 Aligned_cols=13 Identities=38% Similarity=0.713 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHH
Q 006262 304 MAISTSHEVAHQW 316 (653)
Q Consensus 304 ~~~~iaHElaHqW 316 (653)
.+.++||||+|.+
T Consensus 143 ~a~t~AHElGHnl 155 (300)
T 2v4b_A 143 AAFTTAHELGHVF 155 (300)
T ss_dssp HHHHHHHHHHHHT
T ss_pred ceehhhhhhhhhc
Confidence 6789999999986
No 43
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=22.92 E-value=1.5e+02 Score=31.68 Aligned_cols=14 Identities=29% Similarity=0.582 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHH
Q 006262 303 IMAISTSHEVAHQW 316 (653)
Q Consensus 303 ~~~~~iaHElaHqW 316 (653)
..+.++||||+|..
T Consensus 133 ~~A~t~AHELGHnL 146 (510)
T 3g5c_A 133 LMAVTLAQSLAHNI 146 (510)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHc
Confidence 46889999999974
No 44
>3o0y_A Lipoprotein; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, lipid protein; 1.70A {Colwellia psychrerythraea}
Probab=22.28 E-value=3.9e+02 Score=29.05 Aligned_cols=105 Identities=15% Similarity=0.147 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCcceeecCCCC----ccc-ccccccceeecceeeecCCCCCHHHHHHHHHHHHHHHH--
Q 006262 241 DVAIKSLGIYTEFFSTPYPLPKLDMVAVSEFH----AGA-MENFGLIVYRENELLYNEKTSTANRKQIMAISTSHEVA-- 313 (653)
Q Consensus 241 ~~~~~~l~~~e~~fg~~yp~~kld~V~~P~~~----~ga-me~~Gli~~~e~~ll~~~~~s~~~~~~~~~~~iaHEla-- 313 (653)
..+.++...+.++|+ ..|-..+.+..+|.+- .+| +.-+.+-.-+...+..+........+..+..+++||-.
T Consensus 365 ~~~~~~~~~l~~~F~-~lP~~~~~V~~vp~~~~~~~~~ayY~~p~~D~s~pg~~~in~~~~~~~~~~~l~tl~~HEg~PG 443 (609)
T 3o0y_A 365 GYITEVTAKMAPVFR-TTPSYQVEVKSFPVEVQDGAPGGQYTSPAVDGSKPGIYWINLRDMKANPKFGLKTLTYHEANPG 443 (609)
T ss_dssp HHHHHHHHHTGGGCC-CCCSCCCEEEECCHHHHTTSCSEEEECCCTTSSSCCEEEECCSCGGGSCGGGHHHHHHHHSTTT
T ss_pred HHHHHHHHHHHHHhc-cCCCCCCeEEECChhhccCCCCccccCCCCCCCCCceEEEECCcccccchhhHHHHHHhhcccc
Confidence 344445555566776 4554557777777541 111 11121111122222222110001112335668899965
Q ss_pred HHHhc----CccCccc-----cchhHhhhhHHHHHHHHHHhhh
Q 006262 314 HQWFG----NLVTMEW-----WTHLWLNEGFATWISYMATDIM 347 (653)
Q Consensus 314 HqWfG----nlVt~~~-----w~d~WL~EGfA~y~~~~~~~~~ 347 (653)
|++=. ..-.+.. |... ..||-|.|.|.+..+.-
T Consensus 444 HhlQ~~~~~~~~~~~~~R~~~~~~a-~~EGWAlYaE~l~~e~G 485 (609)
T 3o0y_A 444 HHWQIALNLDQAELPFLRRIAPYNA-YTEGWALYSEQVAYELG 485 (609)
T ss_dssp HHHHHHHHHTCTTSCHHHHTCCCHH-HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCHHHHhccccc-ccChHHHHHHHHHHHhC
Confidence 54321 1111222 2222 47999999998877653
No 45
>2rjp_A Adamts-4; metalloprotease domain, aggrecanase, cleavage on PAIR of basic residues, extracellular matrix, glycoprotein, hydrolase, metal-binding; HET: 886; 2.80A {Homo sapiens} PDB: 3b2z_A
Probab=21.60 E-value=1.4e+02 Score=29.49 Aligned_cols=14 Identities=21% Similarity=0.510 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHH
Q 006262 303 IMAISTSHEVAHQW 316 (653)
Q Consensus 303 ~~~~~iaHElaHqW 316 (653)
..+.++||||+|.+
T Consensus 142 ~~a~t~AHElGHnl 155 (316)
T 2rjp_A 142 QSAFTAAHQLGHVF 155 (316)
T ss_dssp THHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhhc
Confidence 36789999999985
No 46
>2ddf_A ADAM 17; hydrolase; HET: INN CIT; 1.70A {Homo sapiens} PDB: 2fv5_A* 3l0v_A* 3kme_A* 3l0t_A* 3kmc_A* 3le9_A* 3lea_A* 3lgp_A* 3o64_A* 3ewj_A* 3edz_A* 3e8r_A* 2fv9_A* 1zxc_A* 2oi0_A* 3b92_A* 2a8h_A* 1bkc_A* 3cki_A 1bkc_I* ...
Probab=21.08 E-value=42 Score=32.18 Aligned_cols=13 Identities=31% Similarity=0.693 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHH
Q 006262 304 MAISTSHEVAHQW 316 (653)
Q Consensus 304 ~~~~iaHElaHqW 316 (653)
.+.++||||+|.+
T Consensus 182 ~a~~~AHElGHnl 194 (257)
T 2ddf_A 182 ADLVTTHELGHNF 194 (257)
T ss_dssp HHHHHHHHHHHHT
T ss_pred eeeeeeeehhhhc
Confidence 5678999999996
Done!