BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006263
(653 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225444784|ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
vinifera]
gi|297738589|emb|CBI27834.3| unnamed protein product [Vitis vinifera]
Length = 622
Score = 1039 bits (2686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/650 (76%), Positives = 565/650 (86%), Gaps = 31/650 (4%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQLND 60
MPVNLTPN+I+ INGGDVNSKPLVQV+DIKLIG++QERYRFL+SD+V+TQ AMLATQLND
Sbjct: 1 MPVNLTPNAIAAINGGDVNSKPLVQVLDIKLIGNSQERYRFLLSDAVATQQAMLATQLND 60
Query: 61 RVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKT 120
RVK+GQV+KGSV+QLIDYICS VQNRKIIVVLNMETII +CE IGNPK+ +ES TAQK
Sbjct: 61 RVKSGQVRKGSVIQLIDYICSVVQNRKIIVVLNMETIIPECEIIGNPKMNTESHSTAQKE 120
Query: 121 IPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQ 180
P N + V V N N G+ + SF+
Sbjct: 121 FPGGNRARSVGVTN------------------------------NNLSVQNGGNKMPSFR 150
Query: 181 PTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAR 240
P+VQPP+QPPPN+++HG ILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAR
Sbjct: 151 PSVQPPFQPPPNYKSHGTILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAR 210
Query: 241 GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNE 300
GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFY+ IEVG+VYLISKGSLKPAQKNFNHLKNE
Sbjct: 211 GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYDTIEVGKVYLISKGSLKPAQKNFNHLKNE 270
Query: 301 WEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILR 360
WEIFLEA+S+V+LC +ED SIPKQQFSFR ISEIE+ ENNSI+DVIGIVISVNPSVPILR
Sbjct: 271 WEIFLEASSSVELCPDEDGSIPKQQFSFRPISEIENVENNSILDVIGIVISVNPSVPILR 330
Query: 361 KNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFS 420
KNGMETQRRI+NLKD SGRS+ELT+WG+FCN+EG +LQEM+D G FPVL+VKSGKVNDFS
Sbjct: 331 KNGMETQRRIVNLKDGSGRSIELTMWGEFCNREGHQLQEMIDSGSFPVLAVKSGKVNDFS 390
Query: 421 GKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQI 480
GKS+GTI +TQLFINPDF EA LREWFD GGKNAA+ SISR+I G++NEI KTVSQI
Sbjct: 391 GKSVGTISATQLFINPDFTEACNLREWFDRGGKNAASQSISRDIMPAGSRNEIRKTVSQI 450
Query: 481 KNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCN 539
K+EGLGRS+KPDWVTV+A I+FIK+D+FCY ACPLMIGDRQCNKKVT+SGN RWQCDRCN
Sbjct: 451 KDEGLGRSDKPDWVTVKATISFIKTDTFCYAACPLMIGDRQCNKKVTRSGNTRWQCDRCN 510
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEII 599
QE ++CDYRYLLQAQ+QD TGLTWVTAFQE+GEEILGC AKELY+LKYE +DD RFGEII
Sbjct: 511 QEFEDCDYRYLLQAQVQDHTGLTWVTAFQEAGEEILGCSAKELYLLKYEEEDDFRFGEII 570
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
RSR+ NQ+LFRLKIKEE+YG+EQRVKITV++AD+VNY+SESR+LLDLISK
Sbjct: 571 RSRLLNQFLFRLKIKEEMYGEEQRVKITVVKADKVNYTSESRHLLDLISK 620
>gi|255546005|ref|XP_002514062.1| replication factor A 1, rfa1, putative [Ricinus communis]
gi|223546518|gb|EEF48016.1| replication factor A 1, rfa1, putative [Ricinus communis]
Length = 670
Score = 1016 bits (2627), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/671 (76%), Positives = 575/671 (85%), Gaps = 21/671 (3%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQLND 60
MPVNLTPN+IS+INGGDVN KPLVQV+DIK IGS QERYRFLISDSVSTQHAMLATQLND
Sbjct: 1 MPVNLTPNAISMINGGDVNMKPLVQVVDIKQIGSAQERYRFLISDSVSTQHAMLATQLND 60
Query: 61 RVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKT 120
RVK G VKKGSVVQLIDYICS VQNRKIIVVLN+ETII +CE IGN K ++ + AQK
Sbjct: 61 RVKHGFVKKGSVVQLIDYICSEVQNRKIIVVLNLETIIPECEIIGNAKTLTD--MFAQKA 118
Query: 121 IPSNNLPQPVRV--NNYSAPNSGT--------FNLQNSG--------TFNSQNPGSFSTP 162
+ N Q V NN SA N + N G TF+SQN G+
Sbjct: 119 SQNGNSVQSAGVGYNNSSARNHDNNVQNFQPPLSAHNQGSSMHNFRPTFSSQNHGNNMQN 178
Query: 163 NSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWA 222
+ A N G+ ++SFQP VQPPY+PPPN+RNHG I+KNEAPARIIPIAALNPYQGRWA
Sbjct: 179 FTSNLSAQNYGNNIQSFQPNVQPPYRPPPNYRNHGAIMKNEAPARIIPIAALNPYQGRWA 238
Query: 223 IKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLI 282
IKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV+RFY++IEVGRVYLI
Sbjct: 239 IKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVERFYDVIEVGRVYLI 298
Query: 283 SKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSI 342
SKGSLKPAQ+NFNHLKNEWEIFLEATSTVDLC + D+SIPKQQF+F+ ISEIE+ ENNSI
Sbjct: 299 SKGSLKPAQRNFNHLKNEWEIFLEATSTVDLCPDGDNSIPKQQFTFKTISEIENVENNSI 358
Query: 343 VDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVD 402
+DVIGIVISVNPSVPILRKNGMETQRRILNLKD SGR++ELTLWGDFCNKEGQ+LQE+VD
Sbjct: 359 LDVIGIVISVNPSVPILRKNGMETQRRILNLKDGSGRNIELTLWGDFCNKEGQQLQEIVD 418
Query: 403 VGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISR 462
G FPVL+VK+GKV+DFSGKS+GTI STQLFINPD EAH L++WFD GG++ A+VSISR
Sbjct: 419 SGDFPVLAVKAGKVSDFSGKSLGTISSTQLFINPDIPEAHGLKDWFDRGGQHTASVSISR 478
Query: 463 EIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQC 522
+I GG+KNEI KTVSQIK+EGLGRS++PDWVTV A ITF+K+D+FCYTACPLMIGDRQC
Sbjct: 479 DILPGGSKNEIRKTVSQIKHEGLGRSDRPDWVTVSARITFVKTDTFCYTACPLMIGDRQC 538
Query: 523 NKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKE 581
NKKVT SGN RWQCDRCNQE DECDYRYLLQ QIQD TGLTWVTAFQESGEEILG PAKE
Sbjct: 539 NKKVTSSGNSRWQCDRCNQEFDECDYRYLLQVQIQDHTGLTWVTAFQESGEEILGLPAKE 598
Query: 582 LYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESR 641
LY LKYE+QDD +F ++IRSR+F Q+LFRLKIKEE+YGDEQRVKITV++A++VNYSSE R
Sbjct: 599 LYQLKYEMQDDTKFSDVIRSRLFQQFLFRLKIKEEMYGDEQRVKITVVKAEKVNYSSEGR 658
Query: 642 YLLDLISKSFR 652
YLLDLIS+ R
Sbjct: 659 YLLDLISQCPR 669
>gi|449488185|ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 623
Score = 986 bits (2549), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/653 (74%), Positives = 558/653 (85%), Gaps = 31/653 (4%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQLND 60
MPV+LTPN+IS I GDVNSKPLVQV+DIKLIG+ QERY LISD+VS + AMLATQLND
Sbjct: 1 MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
Query: 61 RVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKT 120
VKTG+VKKGSV+QLIDY+CS ++NRKIIVVL +ETIILDCE IGNPK ++SE AQK
Sbjct: 61 VVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA 120
Query: 121 IPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQ 180
PS NL QP +V N G A N V+SFQ
Sbjct: 121 TPSVNLEQPAKVGN------------------------------GHLSARNPVHNVQSFQ 150
Query: 181 PTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAR 240
TVQPPYQPPPN++NHG I+KNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNA+
Sbjct: 151 ATVQPPYQPPPNYKNHGAIIKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAK 210
Query: 241 GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNE 300
GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYE+IEVG+VYLISKGSLKPA+K+FNHLKNE
Sbjct: 211 GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEVIEVGKVYLISKGSLKPARKDFNHLKNE 270
Query: 301 WEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILR 360
WE+FLEA+STV+LC +EDD+IP+QQFSF+ ISEIE+AE NSI+DVIGIV S+NPS+P+LR
Sbjct: 271 WEVFLEASSTVELCPDEDDTIPRQQFSFKPISEIENAETNSILDVIGIVTSINPSIPVLR 330
Query: 361 KNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFS 420
KNGMETQRR++ LKD SGRSVELT+WGDFCNKEGQKLQE++ G PVL+VKSGKV+DF+
Sbjct: 331 KNGMETQRRVVYLKDASGRSVELTMWGDFCNKEGQKLQEIIYSGLSPVLAVKSGKVSDFT 390
Query: 421 GKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQI 480
GKSIGTI STQLFINPD EAH LREW+D GGKN ++SIS+EI G AKN+I KTVSQI
Sbjct: 391 GKSIGTISSTQLFINPDLPEAHILREWYDGGGKNTTSLSISKEIVPGSAKNDIRKTVSQI 450
Query: 481 KNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCN 539
K+EGLGR++KPDW+TV+A I+FIK+DSFCYTACPLMIGDRQCNKKVT+SGN +W CDRCN
Sbjct: 451 KDEGLGRADKPDWITVKATISFIKTDSFCYTACPLMIGDRQCNKKVTRSGNSKWVCDRCN 510
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEII 599
QE ++CDYRYLLQAQIQD TGLTWVTAFQE+GEEILG KELYMLKYE QDDV+FGEII
Sbjct: 511 QEFEDCDYRYLLQAQIQDHTGLTWVTAFQETGEEILGVSGKELYMLKYEEQDDVKFGEII 570
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSFR 652
RS++F+Q+LFRLKIKEE+YGDEQRVK TV++AD+VNYSSES+Y+LDL+SK R
Sbjct: 571 RSKIFDQFLFRLKIKEEVYGDEQRVKNTVVKADRVNYSSESKYMLDLLSKFSR 623
>gi|449446612|ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 694
Score = 977 bits (2526), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/644 (74%), Positives = 552/644 (85%), Gaps = 31/644 (4%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQLND 60
MPV+LTPN+IS I GDVNSKPLVQV+DIKLIG+ QERY LISD+VS + AMLATQLND
Sbjct: 1 MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60
Query: 61 RVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKT 120
VKTG+VKKGSV+QLIDY+CS ++NRKIIVVL +ETIILDCE IGNPK ++SE AQK
Sbjct: 61 VVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQKA 120
Query: 121 IPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQ 180
PS NL QP +V N G A N V+SFQ
Sbjct: 121 TPSVNLEQPAKVGN------------------------------GHLSARNPVHNVQSFQ 150
Query: 181 PTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAR 240
TVQPPYQPPPN++NHG I+KNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNA+
Sbjct: 151 ATVQPPYQPPPNYKNHGAIIKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAK 210
Query: 241 GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNE 300
GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYE+IEVG+VYLISKGSLKPA+K+FNHLKNE
Sbjct: 211 GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEVIEVGKVYLISKGSLKPARKDFNHLKNE 270
Query: 301 WEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILR 360
WE+FLEA+STV+LC +EDD+IP+QQFSF+ ISEIE+AE NSI+DVIGIV S+NPS+P+LR
Sbjct: 271 WEVFLEASSTVELCPDEDDTIPRQQFSFKPISEIENAETNSILDVIGIVTSINPSIPVLR 330
Query: 361 KNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFS 420
KNGMETQRR++ LKD SGRSVELT+WGDFCNKEGQKLQE++ G PVL+VKSGKV+DF+
Sbjct: 331 KNGMETQRRVVYLKDASGRSVELTMWGDFCNKEGQKLQEIIYSGLSPVLAVKSGKVSDFT 390
Query: 421 GKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQI 480
GKSIGTI STQLFINPD EAH LREW+D GGKN ++SIS+EI G AKN+I KTVSQI
Sbjct: 391 GKSIGTISSTQLFINPDLPEAHILREWYDGGGKNTTSLSISKEIVPGSAKNDIRKTVSQI 450
Query: 481 KNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCN 539
K+EGLGR++KPDW+TV+A I+FIK+DSFCYTACPLMIGDRQCNKKVT+SGN +W CDRCN
Sbjct: 451 KDEGLGRADKPDWITVKATISFIKTDSFCYTACPLMIGDRQCNKKVTRSGNSKWVCDRCN 510
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEII 599
QE ++CDYRYLLQAQIQD TGLTWVTAFQE+GEEILG AKELYMLKYE QDDV+FGEII
Sbjct: 511 QEFEDCDYRYLLQAQIQDHTGLTWVTAFQETGEEILGVSAKELYMLKYEEQDDVKFGEII 570
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYL 643
RS++F+Q+LFRLKIKEE+YGDEQRVK TV++AD+VNYSSES+Y+
Sbjct: 571 RSKIFDQFLFRLKIKEEVYGDEQRVKNTVVKADRVNYSSESKYI 614
>gi|297831712|ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arabidopsis lyrata subsp.
lyrata]
gi|297329578|gb|EFH59997.1| hypothetical protein ARALYDRAFT_899421 [Arabidopsis lyrata subsp.
lyrata]
Length = 640
Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/656 (70%), Positives = 553/656 (84%), Gaps = 23/656 (3%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLIGSTQER----YRFLISDSVSTQHAMLAT 56
MPV+LTPN+I+ IN GDVN KPL+QV++IK+IG +QER YRFLISD VS QHAM+A
Sbjct: 1 MPVSLTPNAITAINDGDVNLKPLLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAV 60
Query: 57 QLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELT 116
QLNDRVK+GQV+KGS+VQLIDYICS V+ RK+IVVLNMETI+ E IGNP IF E++
Sbjct: 61 QLNDRVKSGQVEKGSIVQLIDYICSDVKGRKLIVVLNMETIVPHSETIGNPTIFGETDTE 120
Query: 117 AQKTIPS-NNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSI 175
AQK + + N+P P RV + N N QNP + STP
Sbjct: 121 AQKPLSAVGNIPPPNRVVFNEPTAQHSVNRAPPRGVNIQNPAN-STP------------- 166
Query: 176 VRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRR 235
SF+P+VQP YQPP ++RNHGPI+KNEAPAR+IPIAALNPYQGRWAIKARVTAKGD+RR
Sbjct: 167 --SFRPSVQPSYQPPASYRNHGPIMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDIRR 224
Query: 236 YNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFN 295
YNNA+GDGKV+SFDLLDSDGGEIRVTCFNAV DRFY++ EVG+VYLISKGSLKPAQKN+N
Sbjct: 225 YNNAKGDGKVYSFDLLDSDGGEIRVTCFNAVADRFYDVTEVGKVYLISKGSLKPAQKNYN 284
Query: 296 HLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPS 355
HLKNEWEIFLE+TSTV+LC +ED SIP+QQFSFR IS+IE+AENN+I+DVIG+V SVNPS
Sbjct: 285 HLKNEWEIFLESTSTVELCPDEDGSIPRQQFSFRPISDIENAENNTILDVIGVVTSVNPS 344
Query: 356 VPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGK 415
VPILRKNGMET RRILNLKD SG++VE+TLWG+FCN++G++L+EMVD F PVL++K+GK
Sbjct: 345 VPILRKNGMETHRRILNLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSAFHPVLAIKAGK 404
Query: 416 VNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGG-AKNEIH 474
V+DFSGKS+GTI STQLFINPDF EAH+LR WFD GGK+ A+ SISR+ GG ++NEI
Sbjct: 405 VSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDHGGKDTASFSISRDTMPGGVSRNEIR 464
Query: 475 KTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSG-NRW 533
K+VSQIK EGLGRS+KPDW+TV+A I+FIK+DSFCYTACPLMIGD+QCNKKVT+SG NRW
Sbjct: 465 KSVSQIKEEGLGRSDKPDWITVKATISFIKTDSFCYTACPLMIGDKQCNKKVTRSGTNRW 524
Query: 534 QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDV 593
CDRCNQE DECDYRYLLQ QIQD TGLTW+TAFQE+GEEI+GCPAK+LY LKYEL+ +
Sbjct: 525 LCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQETGEEIMGCPAKKLYALKYELEKEE 584
Query: 594 RFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
F EI+R R+F+QY+ +LKIKEE YGDEQRVK+TV++ D++NY+SES+Y+LDL+ +
Sbjct: 585 EFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTVVKVDKMNYTSESKYMLDLLVR 640
>gi|15225129|ref|NP_178690.1| replication factor A1 [Arabidopsis thaliana]
gi|4584356|gb|AAD25150.1| putative replication protein A1 [Arabidopsis thaliana]
gi|26452416|dbj|BAC43293.1| putative replication protein A1 [Arabidopsis thaliana]
gi|29029004|gb|AAO64881.1| At2g06510 [Arabidopsis thaliana]
gi|330250916|gb|AEC06010.1| replication factor A1 [Arabidopsis thaliana]
Length = 640
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/656 (69%), Positives = 550/656 (83%), Gaps = 23/656 (3%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLIGSTQER----YRFLISDSVSTQHAMLAT 56
MPV+LTPN+I+ I+ GDVN KPL+QV++IK+IG +QER YRFLISD VS QHAM+A
Sbjct: 1 MPVSLTPNAITAIHDGDVNLKPLLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAV 60
Query: 57 QLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELT 116
QLNDRVK+GQ +KGS+VQLIDYICS V+ RK+IVVLNMETI+ E IGNP IF E++
Sbjct: 61 QLNDRVKSGQFEKGSIVQLIDYICSDVKGRKLIVVLNMETIVQQSETIGNPTIFGETDTE 120
Query: 117 AQKTIP-SNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSI 175
AQKT + N+P P RV + N N QN + +TP
Sbjct: 121 AQKTFSGTGNIPPPNRVVFNEPMVQHSVNRAPPRGVNIQNQAN-NTP------------- 166
Query: 176 VRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRR 235
SF+P+VQP YQPP ++RNHGPI+KNEAPAR+IPIAALNPYQGRWAIKARVTAKGD+RR
Sbjct: 167 --SFRPSVQPSYQPPASYRNHGPIMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDIRR 224
Query: 236 YNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFN 295
YNNA+GDGKVFSFDLLD DGGEIRVTCFNA+VDRFY++ EVG+VYLISKGSLKPAQKNFN
Sbjct: 225 YNNAKGDGKVFSFDLLDYDGGEIRVTCFNALVDRFYDVTEVGKVYLISKGSLKPAQKNFN 284
Query: 296 HLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPS 355
HLKNEWEIFLE+TSTV+LC +ED SIPKQQFSFR IS+IE+AENN+I+DVIG+V SVNPS
Sbjct: 285 HLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRPISDIENAENNTILDVIGVVTSVNPS 344
Query: 356 VPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGK 415
VPILRKNGMET RRILNLKD SG++VE+TLWG+FCN++G++L+EMVD F PVL++K+GK
Sbjct: 345 VPILRKNGMETHRRILNLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSAFHPVLAIKAGK 404
Query: 416 VNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGG-AKNEIH 474
V+DFSGKS+GTI STQLFINPDF EAH+LR WFD GGK+ A+ SISR+ GG ++NEI
Sbjct: 405 VSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDYGGKDTASFSISRDTMPGGVSRNEIR 464
Query: 475 KTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSG-NRW 533
K VSQIK EGLGRS+KPDW+TV+A I+FIK+DSFCYTACPLMIGD+QCNKKVT+SG NRW
Sbjct: 465 KNVSQIKEEGLGRSDKPDWITVKATISFIKTDSFCYTACPLMIGDKQCNKKVTRSGTNRW 524
Query: 534 QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDV 593
CDRCNQE DECDYRYLLQ QIQD TGLTW+TAFQE+GEEI+GCPAK+LY +KYEL+ +
Sbjct: 525 LCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQETGEEIMGCPAKKLYAMKYELEKEE 584
Query: 594 RFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
F EI+R R+F+QY+ +LKIKEE YGDEQRVK+TV++ D+VNY+SES+Y+LDL+ +
Sbjct: 585 EFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTVVKVDKVNYTSESKYMLDLLVR 640
>gi|33621259|gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum]
Length = 637
Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/658 (69%), Positives = 544/658 (82%), Gaps = 26/658 (3%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLI----GSTQERYRFLISDSVSTQHAMLAT 56
M VNLT ++I I GDVN+KPL+Q+++I + S Q+RYR L+SD+VS+ HAMLA
Sbjct: 1 MSVNLTASAIPAIINGDVNAKPLLQILEISSVISNKNSQQQRYRVLLSDAVSSHHAMLAA 60
Query: 57 QLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELT 116
QLND V TG+VK GS+VQL+DYIC+ QNRKII+VLNME+II DCE IG+PK F +SEL
Sbjct: 61 QLNDLVTTGRVKNGSIVQLLDYICTLFQNRKIIMVLNMESIIPDCEIIGSPKPFVDSELP 120
Query: 117 AQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIV 176
QK + N V + N+ NS +QN GS + V
Sbjct: 121 VQKALRDNT------VGSSINSNNNNSYNSNSNILAAQNTGS---------------THV 159
Query: 177 RSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRY 236
++F+PT+QP Y+PPP ++ G ++KNEAPAR IPIAALNPYQGRWAI+ARVTAKGDLRRY
Sbjct: 160 QNFRPTIQPSYKPPPVYKGRGAVMKNEAPARTIPIAALNPYQGRWAIRARVTAKGDLRRY 219
Query: 237 NNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNH 296
NNARGDGKVFSFDLLDSDGGEIRVTCFNA+VDRFY+ IEVG+VYLISKG+LKPAQKNFNH
Sbjct: 220 NNARGDGKVFSFDLLDSDGGEIRVTCFNAIVDRFYDSIEVGKVYLISKGNLKPAQKNFNH 279
Query: 297 LKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSV 356
LKNEWEI L+ STV+LC +ED S PKQQFSFR IS+IE+ E+N+I+DVIG+V SVNPSV
Sbjct: 280 LKNEWEIMLDLNSTVELCPDEDGSYPKQQFSFRPISDIENVESNAILDVIGVVTSVNPSV 339
Query: 357 PILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKV 416
PILRKNGMET RRILNLKD SGRSVELTLWG+FCN+EGQKLQEMVD G FP+L+VK+GKV
Sbjct: 340 PILRKNGMETLRRILNLKDNSGRSVELTLWGEFCNREGQKLQEMVDAGVFPILAVKAGKV 399
Query: 417 NDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKT 476
N+FSGKSIG+I +TQLFINPDF EA LR WFD GK++A++SIS++I GG KNEI KT
Sbjct: 400 NEFSGKSIGSISTTQLFINPDFPEAQSLRAWFDQVGKDSASLSISKDITHGGPKNEIRKT 459
Query: 477 VSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQC 535
VSQI++EGLGRS+KPDW+T+RA I+F+K+D+FCYTACPLMIGDRQCNKKVT+SG+ RWQC
Sbjct: 460 VSQIRDEGLGRSDKPDWITIRATISFMKTDTFCYTACPLMIGDRQCNKKVTRSGDTRWQC 519
Query: 536 DRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRF 595
DRCNQE +ECDYRYLLQAQIQD TGLTWVTAFQE GEEI+G PAKELY LKYE +DD RF
Sbjct: 520 DRCNQEFEECDYRYLLQAQIQDHTGLTWVTAFQEGGEEIMGYPAKELYALKYEQEDDERF 579
Query: 596 GEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSFRK 653
G+I++SR+FN ++FRLKIKEELYG+EQ+VK TV++AD+VNYS+ESRY+LDLISK RK
Sbjct: 580 GDIVKSRLFNHFVFRLKIKEELYGEEQKVKSTVVKADKVNYSAESRYMLDLISKFGRK 637
>gi|356556324|ref|XP_003546476.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Glycine max]
Length = 637
Score = 922 bits (2382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/660 (69%), Positives = 555/660 (84%), Gaps = 30/660 (4%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLI------GSTQERYRFLISDSVSTQHAML 54
M +NLT N+I I GGDVN+KPLVQV+D+ L+ Q+RYR L+SD+V + HAML
Sbjct: 1 MSLNLTANAIPAIIGGDVNAKPLVQVLDVALVSNSNNSQQQQQRYRLLLSDAVFSHHAML 60
Query: 55 ATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESE 114
ATQLNDRV+TG+V+KGSVVQL+DYIC+ ++NRKIIV+LNMETI+ + E IGNPK + +S+
Sbjct: 61 ATQLNDRVRTGRVQKGSVVQLLDYICTPLKNRKIIVILNMETIMDEFEIIGNPKPYMDSD 120
Query: 115 LTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGS 174
IP+ VR ++ ++ +S NL S N+ + G ++ N+
Sbjct: 121 ------IPT------VRASDSASADSTVENLPRSYNSNNSSAGQNASHNN---------- 158
Query: 175 IVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLR 234
++F+PT+QPPYQPPP ++ GP++KNEAPARIIPIAALNPYQGRWAIKARVTAKGDLR
Sbjct: 159 -TQNFRPTIQPPYQPPPLYKGRGPVVKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLR 217
Query: 235 RYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNF 294
RYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFY +IEVG+VY+ISKGSLKPAQKNF
Sbjct: 218 RYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYNVIEVGKVYMISKGSLKPAQKNF 277
Query: 295 NHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNP 354
NHLKNEWEI LE++S V+LC +ED SIP+QQFSFR IS+IE+ +NNSI+DVIG+V SVNP
Sbjct: 278 NHLKNEWEILLESSSMVELCPDEDGSIPRQQFSFRPISDIENVDNNSILDVIGVVTSVNP 337
Query: 355 SVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSG 414
SVPILRKNGMETQRRIL+LKD+SG SVELTLWG+FCN+EGQ+LQ+MVD GFFP+L+VK+G
Sbjct: 338 SVPILRKNGMETQRRILSLKDSSGSSVELTLWGEFCNREGQQLQDMVDAGFFPILAVKTG 397
Query: 415 KVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIH 474
KVNDFSGKSIG+I +TQLFINPDF EAH LREWF+ GK++A++SIS++I G KNE+
Sbjct: 398 KVNDFSGKSIGSISTTQLFINPDFPEAHSLREWFELVGKDSASLSISKDIIPGALKNEVR 457
Query: 475 KTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RW 533
KTVSQIK+EGLGRS+KPDW+TVRA I FIK+D+FCYTACPLMIGDRQCNKKVT+ GN RW
Sbjct: 458 KTVSQIKDEGLGRSDKPDWITVRAAILFIKTDTFCYTACPLMIGDRQCNKKVTRLGNTRW 517
Query: 534 QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDV 593
QCDRCNQE +ECDYRYLLQ QI D TGL WVTAFQE+GEEI+ AK+LY LK+E QDD
Sbjct: 518 QCDRCNQEFEECDYRYLLQVQILDGTGLAWVTAFQEAGEEIMDYSAKDLYFLKHEEQDDE 577
Query: 594 RFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSFRK 653
+FGEII+SR+FNQ++FRLKIKEELYGDEQ+VKITV++AD+VNYSSESRY+LD ISK R+
Sbjct: 578 KFGEIIKSRLFNQFMFRLKIKEELYGDEQKVKITVVKADKVNYSSESRYMLDTISKFCRQ 637
>gi|42570719|ref|NP_973433.1| replication factor A1 [Arabidopsis thaliana]
gi|330250915|gb|AEC06009.1| replication factor A1 [Arabidopsis thaliana]
Length = 617
Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/631 (70%), Positives = 528/631 (83%), Gaps = 23/631 (3%)
Query: 26 VMDIKLIGSTQER----YRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICS 81
V++IK+IG +QER YRFLISD VS QHAM+A QLNDRVK+GQ +KGS+VQLIDYICS
Sbjct: 3 VLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAVQLNDRVKSGQFEKGSIVQLIDYICS 62
Query: 82 TVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIP-SNNLPQPVRVNNYSAPNS 140
V+ RK+IVVLNMETI+ E IGNP IF E++ AQKT + N+P P RV
Sbjct: 63 DVKGRKLIVVLNMETIVQQSETIGNPTIFGETDTEAQKTFSGTGNIPPPNRVVFNEPMVQ 122
Query: 141 GTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPIL 200
+ N N QN + +TP SF+P+VQP YQPP ++RNHGPI+
Sbjct: 123 HSVNRAPPRGVNIQNQAN-NTP---------------SFRPSVQPSYQPPASYRNHGPIM 166
Query: 201 KNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRV 260
KNEAPAR+IPIAALNPYQGRWAIKARVTAKGD+RRYNNA+GDGKVFSFDLLD DGGEIRV
Sbjct: 167 KNEAPARVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRV 226
Query: 261 TCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDS 320
TCFNA+VDRFY++ EVG+VYLISKGSLKPAQKNFNHLKNEWEIFLE+TSTV+LC +ED S
Sbjct: 227 TCFNALVDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGS 286
Query: 321 IPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRS 380
IPKQQFSFR IS+IE+AENN+I+DVIG+V SVNPSVPILRKNGMET RRILNLKD SG++
Sbjct: 287 IPKQQFSFRPISDIENAENNTILDVIGVVTSVNPSVPILRKNGMETHRRILNLKDESGKA 346
Query: 381 VELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAE 440
VE+TLWG+FCN++G++L+EMVD F PVL++K+GKV+DFSGKS+GTI STQLFINPDF E
Sbjct: 347 VEVTLWGEFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPE 406
Query: 441 AHELREWFDSGGKNAATVSISREIAAGG-AKNEIHKTVSQIKNEGLGRSEKPDWVTVRAF 499
AH+LR WFD GGK+ A+ SISR+ GG ++NEI K VSQIK EGLGRS+KPDW+TV+A
Sbjct: 407 AHKLRTWFDYGGKDTASFSISRDTMPGGVSRNEIRKNVSQIKEEGLGRSDKPDWITVKAT 466
Query: 500 ITFIKSDSFCYTACPLMIGDRQCNKKVTQSG-NRWQCDRCNQEIDECDYRYLLQAQIQDQ 558
I+FIK+DSFCYTACPLMIGD+QCNKKVT+SG NRW CDRCNQE DECDYRYLLQ QIQD
Sbjct: 467 ISFIKTDSFCYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDH 526
Query: 559 TGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELY 618
TGLTW+TAFQE+GEEI+GCPAK+LY +KYEL+ + F EI+R R+F+QY+ +LKIKEE Y
Sbjct: 527 TGLTWITAFQETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESY 586
Query: 619 GDEQRVKITVIRADQVNYSSESRYLLDLISK 649
GDEQRVK+TV++ D+VNY+SES+Y+LDL+ +
Sbjct: 587 GDEQRVKMTVVKVDKVNYTSESKYMLDLLVR 617
>gi|115449015|ref|NP_001048287.1| Os02g0776800 [Oryza sativa Japonica Group]
gi|46805512|dbj|BAD16963.1| replication protein A 70kDa [Oryza sativa Japonica Group]
gi|46806154|dbj|BAD17384.1| replication protein A 70kDa [Oryza sativa Japonica Group]
gi|113537818|dbj|BAF10201.1| Os02g0776800 [Oryza sativa Japonica Group]
gi|125583873|gb|EAZ24804.1| hypothetical protein OsJ_08582 [Oryza sativa Japonica Group]
gi|215701492|dbj|BAG92916.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715207|dbj|BAG94958.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 656
Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/659 (58%), Positives = 506/659 (76%), Gaps = 25/659 (3%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLI-----GSTQ-ERYRFLISDSVSTQHAMLATQL 58
LTPN ++ GD N KP++Q+++++ + G T+ ER+R ++SD + A+ A QL
Sbjct: 6 LTPNGVAAALAGDTNLKPVLQIVELRGVQVNGAGVTRGERFRAVVSDGTAASSALFAAQL 65
Query: 59 NDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQ 118
+D ++G +++GS+VQL +Y+ + V R+IIV+LN+E ++ +CE IGNP SE+
Sbjct: 66 SDHARSGALRRGSIVQLSEYVINEVGPRRIIVILNLEVLVSECEIIGNPTALSET----- 120
Query: 119 KTIPSNNLPQPVRVNNYS-APNSGTF--NLQNSGTFNSQNPGSFSTP---NSGTFRAPNA 172
+ +P P RV ++ AP G N N+ T S N F NS F A
Sbjct: 121 ----GSPIPNPTRVEQFNGAPQYGLMAGNSSNTTTKPSDNVPLFQNSMAGNSSNF-ATRP 175
Query: 173 GSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGD 232
V FQPTVQP Y+P PN++NHG I+KNEAPARIIPI+ALNPYQGRWAIKARVTAKGD
Sbjct: 176 SDKVPVFQPTVQPSYRPAPNYKNHGAIMKNEAPARIIPISALNPYQGRWAIKARVTAKGD 235
Query: 233 LRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQK 292
+RRY+NA+GDGKVFSFDLLDSDGGEIRVTCFNA++DRFYE++EVG+VY++S+G+L+PAQK
Sbjct: 236 IRRYHNAKGDGKVFSFDLLDSDGGEIRVTCFNALLDRFYEVVEVGKVYVVSRGNLRPAQK 295
Query: 293 NFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV 352
N+NHL NEWEI LE STVDLC +E+ SIP Q+F FR I+EIE A+NN+I+D+IG+V SV
Sbjct: 296 NYNHLNNEWEILLENGSTVDLCPDENSSIPTQRFDFRPINEIEDAQNNAILDIIGVVTSV 355
Query: 353 NPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVK 412
NP I RKNGMETQ+R +NLKD SGRSVE+T+WGDFCN+EG +LQ MV+ G FPVL+VK
Sbjct: 356 NPCTTIQRKNGMETQKRTMNLKDMSGRSVEVTMWGDFCNREGSQLQGMVERGIFPVLAVK 415
Query: 413 SGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNE 472
+GKV+DFSGKS+GTI STQLFINPD AEAH LR+WFDSGG++A+T SISR+I G ++NE
Sbjct: 416 AGKVSDFSGKSVGTISSTQLFINPDSAEAHSLRQWFDSGGRDASTQSISRDITPGASRNE 475
Query: 473 IHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN- 531
I KTV+QIK+EGLG +KPDW+TV+A + F K++SF YTACP MIGDRQCNKKVT+S N
Sbjct: 476 IRKTVAQIKDEGLGMGDKPDWITVKATVIFFKNESFFYTACPNMIGDRQCNKKVTKSTNG 535
Query: 532 RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQD 591
W CD+C++E +ECDYRYLLQ QIQD +G WVTAFQE+G+E+LGC A EL LK ++
Sbjct: 536 NWTCDKCDREFEECDYRYLLQFQIQDHSGTAWVTAFQEAGQELLGCSATELNALKE--RE 593
Query: 592 DVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
D RF + + + +F +YL RLK+KEE YGDE++VK T ++ ++V+ S ES++LLDLISKS
Sbjct: 594 DPRFADTMLNCLFQEYLLRLKVKEESYGDERKVKNTAVKVEKVDPSGESKFLLDLISKS 652
>gi|125541337|gb|EAY87732.1| hypothetical protein OsI_09147 [Oryza sativa Indica Group]
Length = 658
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/660 (58%), Positives = 506/660 (76%), Gaps = 27/660 (4%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLI-----GSTQ-ERYRFLISDSVSTQHAMLATQL 58
LTPN ++ GD N KP++Q+++++ + G T+ ER+R ++SD + A+ A QL
Sbjct: 8 LTPNGVAAALAGDTNLKPVLQIVELRGVQVNGAGVTRGERFRAVVSDGTAASSALFAAQL 67
Query: 59 NDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQ 118
+D ++G +++GS+VQL +Y+ + V R+IIV+LN+E ++ +CE IGNP SE+
Sbjct: 68 SDHARSGALRRGSIVQLSEYVINDVGPRRIIVILNLEVLVSECEIIGNPTALSET----- 122
Query: 119 KTIPSNNLPQPVRVNNYS-APNSGTF--NLQNSGTFNSQNPGSFSTP---NSGTFRAPNA 172
+ +P P RV ++ AP G N N+ T S N F NS F A
Sbjct: 123 ----GSPIPNPTRVEQFNGAPQYGLMAGNSSNTTTKPSDNVPLFQNSMAGNSSNF-ATRP 177
Query: 173 GSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGD 232
V FQPTVQP Y+P PN++NHG I+KNEAPARIIPI+ALNPYQGRWAIKARVTAKGD
Sbjct: 178 SDKVPVFQPTVQPSYRPAPNYKNHGAIMKNEAPARIIPISALNPYQGRWAIKARVTAKGD 237
Query: 233 LRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQK 292
+RRY+NA+GDGKVFSFDLLDSDGGEIRVTCFNA++DRFYE++EVG+VY++S+G+L+PAQK
Sbjct: 238 IRRYHNAKGDGKVFSFDLLDSDGGEIRVTCFNALLDRFYEVVEVGKVYVVSRGNLRPAQK 297
Query: 293 NFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV 352
N+NHL NEWEI LE STVDLC +ED SIP Q+F FR I+EIE A+NN+I+D+IG+V SV
Sbjct: 298 NYNHLNNEWEILLENGSTVDLCPDEDSSIPTQRFDFRPINEIEDAQNNAILDIIGVVTSV 357
Query: 353 NPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVK 412
NP I RKNGMETQ+R +NLKD SGRSVE+T+WGD CN+EG +LQ MV+ G FPVL+VK
Sbjct: 358 NPCTTIQRKNGMETQKRTMNLKDMSGRSVEVTMWGDLCNREGSQLQGMVERGIFPVLAVK 417
Query: 413 SGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNE 472
+GKV+DFSGKS+GTI STQLFINPD AEAH LR+WFDSGG++A+T SISR+I G ++NE
Sbjct: 418 AGKVSDFSGKSVGTISSTQLFINPDSAEAHSLRQWFDSGGRDASTQSISRDITPGASRNE 477
Query: 473 IHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQS--G 530
I KTV+QIK+EGLG +KPDW+TV+A + F K++SF YTACP MIGDRQCNKKVT+S G
Sbjct: 478 IRKTVAQIKDEGLGMGDKPDWITVKATVIFFKNESFFYTACPNMIGDRQCNKKVTKSTTG 537
Query: 531 NRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQ 590
N W CD+C++E +ECDYRYLLQ QIQD +G WVTAFQE+G+E+LGC A EL LK +
Sbjct: 538 N-WTCDKCDREFEECDYRYLLQFQIQDHSGTAWVTAFQEAGQELLGCSATELNALKE--R 594
Query: 591 DDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
+D RF + + + +F +YL RLK+KEE YGDE++VK T ++ ++V+ S ES++LLDLISKS
Sbjct: 595 EDPRFADTMLNCLFQEYLLRLKVKEESYGDERKVKNTAVKVEKVDPSGESKFLLDLISKS 654
>gi|13536993|dbj|BAB40712.1| replication protein A 70kDa [Oryza sativa Japonica Group]
Length = 654
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/659 (58%), Positives = 504/659 (76%), Gaps = 25/659 (3%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLI-----GSTQ-ERYRFLISDSVSTQHAMLATQL 58
LTPN ++ GD N KP++Q+++++ + G T+ ER+R ++SD + A+ A QL
Sbjct: 4 LTPNGVAAALAGDTNLKPVLQIVELRGVQVNGAGVTRGERFRAVVSDGTAASSALFAAQL 63
Query: 59 NDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQ 118
+D ++G +++GS+VQL +Y+ + V R+IIV+LN+E ++ +CE IGNP SE+
Sbjct: 64 SDHARSGALRRGSIVQLSEYVINEVGPRRIIVILNLEVLVSECEIIGNPTALSET----- 118
Query: 119 KTIPSNNLPQPVRVNNYS-APNSGTF--NLQNSGTFNSQNPGSFSTP---NSGTFRAPNA 172
+ +P P RV ++ AP G N N+ T S N F NS F A
Sbjct: 119 ----GSPIPNPTRVEQFNGAPQYGLMAGNSSNTTTKPSDNVPLFQNSMAGNSSNF-ATRP 173
Query: 173 GSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGD 232
V FQPTVQP Y+P PN++NHG I+KNEAPARIIPI+ALNPYQGRWAIKARVTAKGD
Sbjct: 174 SDKVPVFQPTVQPSYRPAPNYKNHGAIMKNEAPARIIPISALNPYQGRWAIKARVTAKGD 233
Query: 233 LRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQK 292
+RRY+NA+GDGKVFSFDLLDSDGGEIRVTCFNA++DRFYE++EVG+VY++S+G+L+PAQK
Sbjct: 234 IRRYHNAKGDGKVFSFDLLDSDGGEIRVTCFNALLDRFYEVVEVGKVYVVSRGNLRPAQK 293
Query: 293 NFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV 352
N+NHL NEWEI LE STVDLC +E+ SIP Q+F FR I+EIE A+NN+I+D+IG+V SV
Sbjct: 294 NYNHLNNEWEILLENGSTVDLCPDENSSIPTQRFDFRPINEIEDAQNNAILDIIGVVTSV 353
Query: 353 NPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVK 412
NP I RKNGMETQ+R +NLKD SGRSVE+T+WGDFCN+EG +LQ MV+ G FPVL+VK
Sbjct: 354 NPCTTIQRKNGMETQKRTMNLKDMSGRSVEVTMWGDFCNREGSQLQGMVERGIFPVLAVK 413
Query: 413 SGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNE 472
+GKV+DFSGKS+GTI STQ FINPD AEAH LR+WFDSGG++A T SISR+I G ++NE
Sbjct: 414 AGKVSDFSGKSVGTISSTQFFINPDSAEAHSLRQWFDSGGRDAFTQSISRDITPGASRNE 473
Query: 473 IHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN- 531
I KTV+QIK+EGLG +KPDW+TV+A + F K++SF YTACP MIGDRQCNKKVT+S N
Sbjct: 474 IRKTVAQIKDEGLGMGDKPDWITVKATVIFFKNESFFYTACPNMIGDRQCNKKVTKSTNG 533
Query: 532 RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQD 591
W CD+C++E +ECDYRYLLQ QIQD +G WVTAFQE+G+E+LGC A EL LK ++
Sbjct: 534 NWTCDKCDREFEECDYRYLLQFQIQDHSGTAWVTAFQEAGQELLGCSATELNALKE--RE 591
Query: 592 DVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
D RF + + + +F +YL RLK+KEE YGDE++VK T ++ ++V+ S ES++LLDLISKS
Sbjct: 592 DPRFADTMLNCLFQEYLLRLKVKEESYGDERKVKNTAVKVEKVDPSGESKFLLDLISKS 650
>gi|242066720|ref|XP_002454649.1| hypothetical protein SORBIDRAFT_04g034780 [Sorghum bicolor]
gi|241934480|gb|EES07625.1| hypothetical protein SORBIDRAFT_04g034780 [Sorghum bicolor]
Length = 652
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/659 (57%), Positives = 494/659 (74%), Gaps = 29/659 (4%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLI---GSTQERYRFLISDSVSTQHAMLATQLNDR 61
LTPN+++ GD N KP+VQV+D++ I G + R+R +ISD V+T HA+ A+QL D
Sbjct: 6 LTPNAVAAAMAGDTNLKPVVQVVDLRSIAVTGGSGPRFRAIISDGVATGHALFASQLCDL 65
Query: 62 VKTGQVKKGSVVQLIDYICSTV---QNRKIIVVLNMETIILDCEPIGNPKIFSES-ELTA 117
++G V++GSVVQL+DYI + V +NRK IV+LN+E + +CE IGNP + +S + +
Sbjct: 66 ARSGVVRRGSVVQLLDYIVNDVGPHRNRKAIVILNLEVLAAECEIIGNPALPPDSGDSNS 125
Query: 118 QKTIPSNNLPQ-----PVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNA 172
+ N Q +N + P+ +Q S NS N P
Sbjct: 126 MRADQFNGALQNGSIAGTALNKVARPSDNAQVIQRSMAGNSLN------------MVPRP 173
Query: 173 GSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGD 232
+ FQPTVQP Y+P PN+RNHG I+KN+APARIIPI+ALNPYQGRWAIK RVTAKG+
Sbjct: 174 SENAQVFQPTVQPSYRPAPNYRNHGTIMKNDAPARIIPISALNPYQGRWAIKGRVTAKGE 233
Query: 233 LRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQK 292
+RRY+NA+GDGKVFSFDLLDSDGGEIR TCFN +VDRFYE++EVG+VY++S+G+LKPA+K
Sbjct: 234 IRRYHNAKGDGKVFSFDLLDSDGGEIRATCFNTLVDRFYEVVEVGKVYVVSRGNLKPAKK 293
Query: 293 NFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV 352
++NHL NEWEIFLE ST++LC +E+ SIP Q+FSF I +IE +ENN+IVDVIG+V SV
Sbjct: 294 DYNHLNNEWEIFLEFQSTIELCLDENSSIPAQRFSFSSIDKIEDSENNAIVDVIGVVTSV 353
Query: 353 NPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVK 412
NPS I RKNGME Q+R + LKDTSGRSVELT+WGDFCN+EG +LQEMV+ G FPVL+VK
Sbjct: 354 NPSTTIQRKNGMEAQKRTITLKDTSGRSVELTMWGDFCNREGLQLQEMVEYGVFPVLAVK 413
Query: 413 SGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNE 472
+GKVND+SGKS+GTI S+QL INPD AEAH LR+WFD GG++A+T SISR+ ++NE
Sbjct: 414 AGKVNDYSGKSVGTISSSQLLINPDLAEAHSLRQWFDCGGRDASTQSISRDFTPSASRNE 473
Query: 473 IHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ--SG 530
I KT++QIK++GLG +KPDWVTV+A +TFIK+D FCYTACP ++GDRQC KKVT+ SG
Sbjct: 474 IRKTIAQIKDDGLGMGDKPDWVTVKATVTFIKTDPFCYTACPNVVGDRQCGKKVTKSDSG 533
Query: 531 NRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQ 590
N W CD+CNQE ECDYRYLLQ IQD TG T TAFQE G+E+LGC A+EL M K
Sbjct: 534 N-WLCDKCNQEFPECDYRYLLQLNIQDHTGTTSATAFQEVGQELLGCSARELNMFKE--N 590
Query: 591 DDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+D R+ ++ ++ YL RLK+KEE YGDE+RVK TV++ ++V+ S+ES++LLD IS+
Sbjct: 591 EDPRYTAVLIHCLYQNYLLRLKVKEEQYGDERRVKNTVVKVERVDPSAESKFLLDSISR 649
>gi|225427514|ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Vitis vinifera]
Length = 882
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/712 (54%), Positives = 504/712 (70%), Gaps = 64/712 (8%)
Query: 1 MPVNLTPNSISLINGGDVNS---KPLVQVMDIKLIGSTQ-----ERYRFLISDSVSTQHA 52
M VNLT +IS++ GD KP++QV DI+L+ + Q ER+R L+SD Q
Sbjct: 1 MGVNLTEGAISMLCSGDAQGSDVKPVLQVADIRLVNTQQQSNSNERFRILLSDGCHLQQG 60
Query: 53 MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIF-- 110
MLATQ N+ VK+G+++KGSVVQL ++C+ +++R II++++++ I+ C+PIG PK +
Sbjct: 61 MLATQRNELVKSGRLQKGSVVQLTQFVCNVIKDRMIIIIIDLDVILEKCDPIGEPKQYVQ 120
Query: 111 ------------SESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGS 158
+ + + + P L P N S +G + + S
Sbjct: 121 GGTAGGVAPIARTSAPMPSSVDHPGTVLGNPQSFGNSSLTGGSAAKPNMAGVASPYHANS 180
Query: 159 FST-PNSGTFRAPNAGSIVRSFQPTV---------------------------QPPY--- 187
FS+ P+SG F NA + QP + PY
Sbjct: 181 FSSNPDSGRFAGTNAPPMYSKMQPDAGIPASAASTGSYGDQSTGFRNNKVEVSRAPYNAP 240
Query: 188 ---------QPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNN 238
QPPP + N GP+ +NEA ARIIPIAALNPYQGRW IKARVTAKG+LR YNN
Sbjct: 241 ARQPQSAYQQPPPMYTNRGPVARNEAAARIIPIAALNPYQGRWTIKARVTAKGELRHYNN 300
Query: 239 ARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLK 298
RGDGKVFSFDLLDSDGGEIRVTCFNAV D+FY IE G+VYLISKGSLKPAQK FNHL+
Sbjct: 301 PRGDGKVFSFDLLDSDGGEIRVTCFNAVADQFYNQIETGKVYLISKGSLKPAQKTFNHLR 360
Query: 299 NEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI 358
N+ EIFLE+TST+ C ++D+SIP+QQF FR IS++ES ENNS+VDVIG+V ++PS I
Sbjct: 361 NDHEIFLESTSTIQPCFDDDNSIPRQQFHFRSISDVESMENNSVVDVIGVVSFISPSASI 420
Query: 359 LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVND 418
+RKNG ETQ+R L+LKD SGRSVELTLWG+FCN EGQ+LQ M D G FPVL+VKS +VND
Sbjct: 421 MRKNGTETQKRALHLKDMSGRSVELTLWGNFCNAEGQRLQNMCDSGVFPVLAVKSARVND 480
Query: 419 FSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVS 478
F+GK++GTI ++QLFI PDF EA +L+EWFD G+N +VSISRE+ + G + ++ KT+S
Sbjct: 481 FNGKAVGTISTSQLFIEPDFPEARKLKEWFDKEGRNTPSVSISREVTSMG-RTDVRKTIS 539
Query: 479 QIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDR 537
QIK+E LG SEKPDW+TV A ++FIK D+FCYTACP+MIGDRQCNKKVT +G+ +W+C+R
Sbjct: 540 QIKDERLGTSEKPDWITVCATVSFIKVDNFCYTACPIMIGDRQCNKKVTNNGDGKWRCER 599
Query: 538 CNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGE 597
C+Q +D+CDYRY+LQ QIQD TGLTWVTAFQE GEEI+G AK LY LKYE QDD +FGE
Sbjct: 600 CDQSVDDCDYRYILQFQIQDHTGLTWVTAFQECGEEIMGISAKNLYYLKYEEQDDEKFGE 659
Query: 598 IIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
I+R +F +Y F+LK+KEE++ DEQRVK TV++A++VN+SSESR+LLD++ K
Sbjct: 660 ILRGVLFTKYSFKLKVKEEIFSDEQRVKSTVVKAEKVNFSSESRFLLDMVEK 711
>gi|147856620|emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]
Length = 882
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/712 (54%), Positives = 503/712 (70%), Gaps = 64/712 (8%)
Query: 1 MPVNLTPNSISLINGGDVNS---KPLVQVMDIKLIGSTQ-----ERYRFLISDSVSTQHA 52
M VNLT +IS++ GD KP++QV DI+L+ + Q ER+R L+SD Q
Sbjct: 1 MGVNLTEGAISMLCSGDAQGSDVKPVLQVADIRLVNTQQQSNSNERFRILLSDGCHLQQG 60
Query: 53 MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIF-- 110
MLATQ N+ VK+G+++KGSVVQL ++C+ +++R II++++++ I+ C+PIG PK +
Sbjct: 61 MLATQRNELVKSGRLQKGSVVQLTQFVCNVIKDRMIIIIIDLDVILEKCDPIGEPKQYVQ 120
Query: 111 ------------SESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGS 158
+ + + + P L P N S +G + + S
Sbjct: 121 GGTAGGVAPIARTSAPMPSSVDHPGTVLGNPQSFGNSSLTGGSAAKPNMAGVASPYHANS 180
Query: 159 FST-PNSGTFRAPNAGSIVRSFQPTV---------------------------QPPY--- 187
FS+ P+SG F NA + QP + PY
Sbjct: 181 FSSNPDSGRFAGTNAPPMYSKMQPDAGIPASAASTGSYGDQSTGFRNNKVEVSRAPYNAP 240
Query: 188 ---------QPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNN 238
QPPP + N GP+ +NEA ARIIPIAALNPYQGRW IKARVTAKG+LR YNN
Sbjct: 241 ARQPQSAYQQPPPMYTNRGPVARNEAXARIIPIAALNPYQGRWTIKARVTAKGELRHYNN 300
Query: 239 ARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLK 298
RGDGKVFSFDLLDSDGGEIRVTCFNAV D+FY IE G+VYLISKGSLKPAQK FNHL+
Sbjct: 301 PRGDGKVFSFDLLDSDGGEIRVTCFNAVADQFYNQIETGKVYLISKGSLKPAQKTFNHLR 360
Query: 299 NEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI 358
N+ EIFLE+TST+ C ++D+SIP+QQF FR IS++ES ENNS+VDVIG+V ++PS I
Sbjct: 361 NDHEIFLESTSTIQPCFDDDNSIPRQQFHFRXISDVESMENNSVVDVIGVVSFISPSASI 420
Query: 359 LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVND 418
+RKNG ETQ+R L+LKD SGRSVELTLWG+FCN EGQ+LQ M D G FPVL+VKS +VND
Sbjct: 421 MRKNGTETQKRALHLKDMSGRSVELTLWGNFCNAEGQRLQNMCDSGVFPVLAVKSARVND 480
Query: 419 FSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVS 478
F+GK++GTI ++QLFI PDF EA +L+EWFD G+N +VSISRE+ G + ++ KT+S
Sbjct: 481 FNGKAVGTISTSQLFIEPDFPEARKLKEWFDKEGRNTPSVSISREVTXMG-RTDVRKTIS 539
Query: 479 QIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDR 537
QIK+E LG SEKPDW+TV A ++FIK D+FCYTACP+MIGDRQCNKKVT +G+ +W+C+R
Sbjct: 540 QIKDERLGTSEKPDWITVCATVSFIKVDNFCYTACPIMIGDRQCNKKVTNNGDGKWRCER 599
Query: 538 CNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGE 597
C+Q +D+CDYRY+LQ QIQD TGLTWVTAFQE GEEI+G AK LY LKYE QDD +FGE
Sbjct: 600 CDQSVDDCDYRYILQFQIQDHTGLTWVTAFQECGEEIMGISAKNLYYLKYEEQDDEKFGE 659
Query: 598 IIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
I+R +F +Y F+LK+KEE++ DEQRVK TV++A++VN+SSESR+LLD++ K
Sbjct: 660 ILRGVLFTKYSFKLKVKEEIFSDEQRVKSTVVKAEKVNFSSESRFLLDMVEK 711
>gi|293331519|ref|NP_001169500.1| uncharacterized protein LOC100383373 [Zea mays]
gi|224029699|gb|ACN33925.1| unknown [Zea mays]
Length = 656
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/663 (57%), Positives = 493/663 (74%), Gaps = 33/663 (4%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLIGSTQE-----RYRFLISDSVSTQHAMLATQLN 59
LT N+++ GD N KP+VQV+D++ I T R+R +ISD V+T HA+ A+QL
Sbjct: 6 LTGNAVAAAMAGDTNLKPVVQVVDLRSIAVTGAPGSGPRFRAIISDGVATGHALFASQLC 65
Query: 60 DRVKTGQVKKGSVVQLIDYICSTV---QNRKIIVVLNMETIILDCEPIGNPKIFSESELT 116
D ++G V++GSVVQL+DYI + V +NRK IV+LNME ++ +CE IGNP + ES +
Sbjct: 66 DLARSGVVRRGSVVQLLDYIVNNVGPTRNRKAIVILNMEVLVAECEIIGNPALPPESGDS 125
Query: 117 AQKTI--------PSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFR 168
+ ++ P N +N P+ +Q S T NS N
Sbjct: 126 SSNSLRADQFNGAPPNGSMAGSTLNKVIKPSDNAPVIQRSMTGNSLN------------M 173
Query: 169 APNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVT 228
P + FQPTVQP Y+P P +R+HG I+KN+APARIIPI ALNPYQGRWAIKARVT
Sbjct: 174 VPRPSDNAQVFQPTVQPSYRPAPKYRSHGTIMKNDAPARIIPIPALNPYQGRWAIKARVT 233
Query: 229 AKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLK 288
AKG++RRY+NA+GDGKVFSFDLLD+DGGEIR TCFNA+VDRFYE++EVG+VY++S+G+LK
Sbjct: 234 AKGEIRRYHNAKGDGKVFSFDLLDTDGGEIRATCFNALVDRFYEVVEVGKVYVVSRGNLK 293
Query: 289 PAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGI 348
PA+K++NHL NEWEIFLE ST++LC +E+ SIP Q+FSF I +IE++ENN+IVDVIG+
Sbjct: 294 PAKKDYNHLNNEWEIFLEPQSTIELCLDENSSIPAQRFSFSSIDKIENSENNAIVDVIGV 353
Query: 349 VISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPV 408
V SVNPS I RKNGME Q+R + L D SGRSVELT+WGDFCN+EG +LQEMV+ G FPV
Sbjct: 354 VTSVNPSTTIQRKNGMEAQKRTITLNDMSGRSVELTMWGDFCNREGSQLQEMVECGAFPV 413
Query: 409 LSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGG 468
L+VK+GKVND+SGKS+GTI S+QL INPD AEAH LR+WFD GG++A+T SISR+
Sbjct: 414 LAVKAGKVNDYSGKSVGTISSSQLHINPDLAEAHSLRQWFDCGGRDASTQSISRDFTPSA 473
Query: 469 AKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ 528
+ NE+ KTV+QIK++GLG +KPDWVTV+A I+FIK+DSFCYTACP +IGDRQC KKVT+
Sbjct: 474 SWNEVRKTVAQIKDDGLGMGDKPDWVTVKAAISFIKTDSFCYTACPNVIGDRQCGKKVTK 533
Query: 529 --SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLK 586
SGN W CD+CNQE ECDYRYLLQ IQD TG T VTAFQ+ G+EILGC A+EL + K
Sbjct: 534 SDSGN-WLCDKCNQEFPECDYRYLLQLNIQDHTGTTSVTAFQDRGQEILGCSARELNIFK 592
Query: 587 YELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDL 646
D R+ +++ + ++ YLFRLK+KEE YGD ++VK TV + ++V+ +ES++LLD
Sbjct: 593 E--NKDPRYTDVLINCLYQNYLFRLKVKEEQYGDVRQVKNTVAKVERVDPLAESKFLLDS 650
Query: 647 ISK 649
IS+
Sbjct: 651 ISR 653
>gi|413924352|gb|AFW64284.1| hypothetical protein ZEAMMB73_597518 [Zea mays]
Length = 761
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/663 (57%), Positives = 493/663 (74%), Gaps = 33/663 (4%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLIGSTQE-----RYRFLISDSVSTQHAMLATQLN 59
LT N+++ GD N KP+VQV+D++ I T R+R +ISD V+T HA+ A+QL
Sbjct: 111 LTGNAVAAAMAGDTNLKPVVQVVDLRSIAVTGAPGSGPRFRAIISDGVATGHALFASQLC 170
Query: 60 DRVKTGQVKKGSVVQLIDYICSTV---QNRKIIVVLNMETIILDCEPIGNPKIFSESELT 116
D ++G V++GSVVQL+DYI + V +NRK IV+LNME ++ +CE IGNP + ES +
Sbjct: 171 DLARSGVVRRGSVVQLLDYIVNNVGPTRNRKAIVILNMEVLVAECEIIGNPALPPESGDS 230
Query: 117 AQKTI--------PSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFR 168
+ ++ P N +N P+ +Q S T NS N
Sbjct: 231 SSNSLRADQFNGAPPNGSMAGSTLNKVIKPSDNAPVIQRSMTGNSLN------------M 278
Query: 169 APNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVT 228
P + FQPTVQP Y+P P +R+HG I+KN+APARIIPI ALNPYQGRWAIKARVT
Sbjct: 279 VPRPSDNAQVFQPTVQPSYRPAPKYRSHGTIMKNDAPARIIPIPALNPYQGRWAIKARVT 338
Query: 229 AKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLK 288
AKG++RRY+NA+GDGKVFSFDLLD+DGGEIR TCFNA+VDRFYE++EVG+VY++S+G+LK
Sbjct: 339 AKGEIRRYHNAKGDGKVFSFDLLDTDGGEIRATCFNALVDRFYEVVEVGKVYVVSRGNLK 398
Query: 289 PAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGI 348
PA+K++NHL NEWEIFLE ST++LC +E+ SIP Q+FSF I +IE++ENN+IVDVIG+
Sbjct: 399 PAKKDYNHLNNEWEIFLEPQSTIELCLDENSSIPAQRFSFSSIDKIENSENNAIVDVIGV 458
Query: 349 VISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPV 408
V SVNPS I RKNGME Q+R + L D SGRSVELT+WGDFCN+EG +LQEMV+ G FPV
Sbjct: 459 VTSVNPSTTIQRKNGMEAQKRTITLNDMSGRSVELTMWGDFCNREGSQLQEMVECGAFPV 518
Query: 409 LSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGG 468
L+VK+GKVND+SGKS+GTI S+QL INPD AEAH LR+WFD GG++A+T SISR+
Sbjct: 519 LAVKAGKVNDYSGKSVGTISSSQLHINPDLAEAHSLRQWFDCGGRDASTQSISRDFTPSA 578
Query: 469 AKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ 528
+ NE+ KTV+QIK++GLG +KPDWVTV+A I+FIK+DSFCYTACP +IGDRQC KKVT+
Sbjct: 579 SWNEVRKTVAQIKDDGLGMGDKPDWVTVKAAISFIKTDSFCYTACPNVIGDRQCGKKVTK 638
Query: 529 --SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLK 586
SGN W CD+CNQE ECDYRYLLQ IQD TG T VTAFQ+ G+EILGC A+EL + K
Sbjct: 639 SDSGN-WLCDKCNQEFPECDYRYLLQLNIQDHTGTTSVTAFQDRGQEILGCSARELNIFK 697
Query: 587 YELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDL 646
D R+ +++ + ++ YLFRLK+KEE YGD ++VK TV + ++V+ +ES++LLD
Sbjct: 698 E--NKDPRYTDVLINCLYQNYLFRLKVKEEQYGDVRQVKNTVAKVERVDPLAESKFLLDS 755
Query: 647 ISK 649
IS+
Sbjct: 756 ISR 758
>gi|449456771|ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 861
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/681 (55%), Positives = 490/681 (71%), Gaps = 54/681 (7%)
Query: 21 KPLVQVMDIKLIGSTQ----ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLI 76
+P++QV+D+KL+ ++Q ER+R L+SD Q ML TQLN+ VK+G+++KGS+V+L
Sbjct: 29 QPILQVIDLKLVNTSQQSGSERFRLLVSDGTHFQQGMLGTQLNELVKSGKLQKGSIVRLR 88
Query: 77 DYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTA------------------- 117
Y+C+ VQ R II+V+ ++ I C+ IG P + S A
Sbjct: 89 QYVCNPVQERLIIIVIELDVIEEMCDIIGEPVSATRSSANALSGNPLPSVGGLGASPGSG 148
Query: 118 ---QKTIPSNNLPQPVRVNNYSAPNSGTF-NLQNSGTFNSQ-NPGSFSTPNSGT-FRAP- 170
+ + S + QP +VN P+ G++ N +G F++ P S+S +SG+ F P
Sbjct: 149 MIGKGNVSSASFEQP-KVNQSHVPHMGSYSNPPETGRFSASIAPPSYSKTDSGSRFNGPS 207
Query: 171 --------------NAGSIV------RSFQPTVQPPYQPPPN-FRNHGPILKNEAPARII 209
N+GS + + QP YQ PP+ + N GPI KNEA RI+
Sbjct: 208 PLTGSYGDQKMAYHNSGSDIPRPPLNSNAYARPQPIYQQPPSMYSNRGPIAKNEAAPRIM 267
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
PI+ALNPYQGRW IKARVT+KG+LR YNN RGDGKVFSFDLLD+ GEIRVTCFN V D+
Sbjct: 268 PISALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDAYRGEIRVTCFNTVADQ 327
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFR 329
FY IE G+VY ISKGSLKPAQKNFNHLKN++EIFLE TST+ C E+D SIP+QQF F
Sbjct: 328 FYNQIESGKVYFISKGSLKPAQKNFNHLKNDYEIFLENTSTIQPCFEDDQSIPQQQFHFH 387
Query: 330 HISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDF 389
I EIE ++NS+VDVIG+V S+NP+ ++RKNG ETQ+R L LKD SGRSVELTLWG+F
Sbjct: 388 QIGEIEGMDSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSVELTLWGNF 447
Query: 390 CNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFD 449
C EGQ+LQ M D G FPVL+VKS +V+DF+GK++GTI ++QLFI PDF EAH LREWF+
Sbjct: 448 CQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGKAVGTISTSQLFIEPDFPEAHSLREWFE 507
Query: 450 SGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFC 509
G++ +VSISRE+A+ G + ++ KT+SQIK+E LG SEKPDW+TV A ++FIK DSFC
Sbjct: 508 REGRSTLSVSISREVASVG-RTDVRKTISQIKDERLGTSEKPDWITVSATVSFIKVDSFC 566
Query: 510 YTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQ 568
YTACP+MIGDRQC+KKVT +G+ +W+CDRC+Q +DECDYRY+LQ QIQD TGLTWVTAFQ
Sbjct: 567 YTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGLTWVTAFQ 626
Query: 569 ESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITV 628
E GEEI+G PAK LY LKYE QDD +F EIIR +F +++ +LKIKEE + DEQRV+ TV
Sbjct: 627 EGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKIKEETFSDEQRVRSTV 686
Query: 629 IRADQVNYSSESRYLLDLISK 649
++A+ +N+SSESR+LL+L+ K
Sbjct: 687 VKAESINFSSESRFLLNLMEK 707
>gi|255557709|ref|XP_002519884.1| replication factor A 1, rfa1, putative [Ricinus communis]
gi|223540930|gb|EEF42488.1| replication factor A 1, rfa1, putative [Ricinus communis]
Length = 901
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/732 (51%), Positives = 494/732 (67%), Gaps = 96/732 (13%)
Query: 3 VNLTPNSISLINGGDVNS---KPLVQVMDIKLIGSTQ----ERYRFLISDSVSTQHAMLA 55
+NL+ +IS I G + KP +QV ++K + + Q ER+R ++SD Q AML
Sbjct: 4 MNLSEGAISKITSGGATAAELKPTLQVTELKQVQTKQPQQSERFRLILSDGSHLQQAMLG 63
Query: 56 TQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKII--------------VVLNMETIIL-- 99
TQ+N VK G ++ GSVVQLI Y C+TVQ R ++ L + I+L
Sbjct: 64 TQINHLVKDGNLRPGSVVQLIQYTCTTVQGRMLLGSRSCIGCERNRGRAYLLLNEILLGF 123
Query: 100 ----DCEPIGNPKIFSESELTAQKTI----PSNNLP--QPVRVNNYSA----------PN 139
C IGNP ++AQKT+ PS + P P +Y + PN
Sbjct: 124 FSFAKCAIIGNP-------VSAQKTLGPSHPSTDQPVSSPANPQSYGSGSPAGGMVENPN 176
Query: 140 SGTFNLQN---SGTFNSQNPGSFST----------------PNSGTFRAPNAGSIVRSF- 179
+LQN + S +P S+ + P SG P + S+ RS+
Sbjct: 177 LNVSSLQNPRMNQLHGSSHPSSYDSGRYVTTNAPPCHLKAEPGSGL---PGSASMNRSYN 233
Query: 180 --------------QPTVQPPY-------QPPPNFRNHGPILKNEAPARIIPIAALNPYQ 218
Q T PY QPPP + N GP+ KNEAP RI+PI+ALNPYQ
Sbjct: 234 EQSAGFCNPRPEIPQTTGTYPYPPCPAYQQPPPMYSNRGPVAKNEAPPRIMPISALNPYQ 293
Query: 219 GRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGR 278
GRW IKARVTAKG+LR YNN RGDGKVFSFDLLDSDGGEIRV CFN V D+FY IE G+
Sbjct: 294 GRWTIKARVTAKGELRHYNNVRGDGKVFSFDLLDSDGGEIRVICFNTVADQFYHQIEAGK 353
Query: 279 VYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAE 338
VYLIS+G+LKPAQK FNHL N+ EIFLE+ S + C E+DD+IP+QQF FR ISE+E +
Sbjct: 354 VYLISRGNLKPAQKTFNHLHNDLEIFLESNSVIQPCFEDDDAIPRQQFHFRPISEVEGMD 413
Query: 339 NNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQ 398
NNS+VD+IG+V + P I+RKNG ETQ+R L LKD SGRSVELTLWG+FCN EGQ+LQ
Sbjct: 414 NNSVVDIIGMVSCITPVASIMRKNGTETQKRTLQLKDNSGRSVELTLWGNFCNAEGQRLQ 473
Query: 399 EMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATV 458
M D G FPVL+VKSG+V+DF+GK++GTI ++QLFI PD EA L+EWF+ G+N +V
Sbjct: 474 NMCDSGGFPVLAVKSGRVSDFNGKAVGTISTSQLFIEPDIPEARRLKEWFEKEGRNTPSV 533
Query: 459 SISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIG 518
SISRE+++ G ++EIHKT+SQIK+E LG SEKPDW+T+ A + +IK+D+FCYTACP+M G
Sbjct: 534 SISRELSSVG-RSEIHKTISQIKDEKLGTSEKPDWITINATVIYIKADNFCYTACPIMAG 592
Query: 519 DRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGC 577
DR C+KKVT +G+ +W+C++C+Q +DECDYRY+LQ Q+QD TG+TWVTAFQESGEEI+G
Sbjct: 593 DRPCSKKVTNNGDGKWRCEKCDQSMDECDYRYILQLQLQDHTGITWVTAFQESGEEIMGI 652
Query: 578 PAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYS 637
AK+L+ +KYE QDD F +I+R +F++++ +LK+KEE + DEQRVK TV+RA++VN+S
Sbjct: 653 SAKDLHFMKYENQDDESFSKILRQVLFSKFVIKLKVKEETFSDEQRVKSTVVRAEKVNHS 712
Query: 638 SESRYLLDLISK 649
S+SR+LL+++ K
Sbjct: 713 SQSRFLLEIMEK 724
>gi|357113420|ref|XP_003558501.1| PREDICTED: LOW QUALITY PROTEIN: replication protein A 70 kDa
DNA-binding subunit-like [Brachypodium distachyon]
Length = 645
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/653 (54%), Positives = 485/653 (74%), Gaps = 24/653 (3%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQLNDRVKT 64
LTPN+++ + G N +P+VQV+D++ + +R+R +SD +++ AMLA +L D ++
Sbjct: 6 LTPNAVAAVLAGGTNLRPVVQVVDLRR--ANGDRWRACVSDGLTSCSAMLAERLGDLPRS 63
Query: 65 GQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSN 124
G V+ GS+VQL DY+ S +R+I+VVLNM + +C IGNP I SE+ + Q +
Sbjct: 64 GVVRCGSIVQLDDYVLSD-PSRRIVVVLNMTVLRAECAIIGNPTITSETVSSNQNHLRVE 122
Query: 125 NLPQPVRVN------NYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRS 178
+ N + PN Q S N+ N TP + + P +
Sbjct: 123 QFNGTRQYGLTAGNPNLTRPNGNVPVFQPSMAANTLN-----TPTRLSGQTP-------A 170
Query: 179 FQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNN 238
FQPT QP Y+P P+++NHG I KNEAPARIIPI+ LNPYQGRWAIK RVTAKGD+RRY+N
Sbjct: 171 FQPTAQPSYRPAPSYKNHGAIAKNEAPARIIPISTLNPYQGRWAIKGRVTAKGDIRRYHN 230
Query: 239 ARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLK 298
A+G+GKVFSFDLLDSDGGEIRVTCFNA++DRFYE++EVG+VY++S+G+LKPAQKN+NHL
Sbjct: 231 AKGEGKVFSFDLLDSDGGEIRVTCFNALLDRFYEVVEVGKVYVVSRGNLKPAQKNYNHLN 290
Query: 299 NEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI 358
N WEI L+ S+VDLC +E+ SIP Q+F+FR ISE+E N +I+D+IG+VISV+P +
Sbjct: 291 NXWEITLDNGSSVDLCLDENSSIPSQRFNFRPISEVEDTANTAILDIIGVVISVSPCTTL 350
Query: 359 LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVND 418
+KNGMETQ+R++NLKD SGRSV++T+WG+FCN+EG +LQE+V+ G FPVL+VK+G+VND
Sbjct: 351 QKKNGMETQKRVINLKDMSGRSVDVTIWGEFCNREGSQLQEIVECGGFPVLAVKTGRVND 410
Query: 419 FSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVS 478
F GKS+GTI S+QL I+PD AEAH LR+WFDSGG++A+T SIS ++ ++N+I T++
Sbjct: 411 FGGKSVGTISSSQLLIDPDIAEAHSLRQWFDSGGRDASTQSISTDVIPAASRNDIRMTIA 470
Query: 479 QIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDR 537
QIK+EGLG +KPDWVTV+A I F K+++FCYTACP GDRQCNKKVT+ + W CD+
Sbjct: 471 QIKDEGLGMGDKPDWVTVKASIIFFKNENFCYTACPNKEGDRQCNKKVTKGTSGLWFCDK 530
Query: 538 CNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGE 597
CN+E ECDYRYLLQ QIQD +G TWVTAFQESG+++LGC A++L K E +D RF E
Sbjct: 531 CNREFTECDYRYLLQLQIQDHSGTTWVTAFQESGQDLLGCSAQDLNRFKEE--EDPRFAE 588
Query: 598 IIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
+ +F +YL RLKIKEE YGDE+RVK T+++ ++ + + ES+YLLD IS+S
Sbjct: 589 TMLQCLFQEYLLRLKIKEETYGDERRVKNTLVKVERFDPAGESKYLLDSISRS 641
>gi|326517527|dbj|BAK03682.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 654
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/667 (53%), Positives = 481/667 (72%), Gaps = 41/667 (6%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLIG------STQERYRFLISDSVSTQHAMLATQL 58
LTPN + GD N +P+VQV++++ + +R+R L+SD T AM A QL
Sbjct: 6 LTPNGVGAALAGDTNLRPIVQVVNLRCVNVDGRGTPRSDRWRGLVSDGAETCPAMFAGQL 65
Query: 59 NDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQ 118
+D+ ++G +++GSVVQL +Y+ + V R++IVVLN+ ++ +C+ IGNP I ESE + Q
Sbjct: 66 SDQARSGLIRRGSVVQLDEYVINMVGGRRVIVVLNLTVLLAECDIIGNPVITPESESSNQ 125
Query: 119 KT-------------IPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSG 165
+ + N P P R N N F +G+ S +TP
Sbjct: 126 NNPKVEQFNGARQYGLAAGN-PSPTRPNG----NVPVFQPSVAGS-------SLNTPTRL 173
Query: 166 TFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKA 225
+ ++P FQPT QP Y+P P+++N G I KNEAPARIIPI++LNPYQGRWAIK
Sbjct: 174 SDKSP-------VFQPTAQPSYRPAPSYKNQGAIAKNEAPARIIPISSLNPYQGRWAIKG 226
Query: 226 RVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKG 285
RVTAKGD+RRY+NA+GDGKVF+FDLLDSDGGEIRV CFNA VDRFYE++EVG+VY++S+G
Sbjct: 227 RVTAKGDIRRYHNAKGDGKVFNFDLLDSDGGEIRVACFNAHVDRFYEVVEVGKVYVVSRG 286
Query: 286 SLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDV 345
+LKPAQ+N+NHL +EWEI LE S+VDLC +ED SIP QQF+FR ISEIE +++D+
Sbjct: 287 NLKPAQRNYNHLNSEWEITLERDSSVDLCPDEDSSIPSQQFNFRPISEIEDTPTGTVLDI 346
Query: 346 IGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGF 405
IG+ ISV+PS + +KNG ET +RI+ LKD SGRSV+LT+WGDFCN+EG +LQEMV+ G
Sbjct: 347 IGVAISVSPSTTVQKKNGTETLKRIIGLKDMSGRSVDLTMWGDFCNREGSQLQEMVERGV 406
Query: 406 FPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIA 465
FPVL VK+G+VNDF+GK IGTI S+QL I+PD +EAH LR+WFD GG++A+T SISR+
Sbjct: 407 FPVLGVKTGRVNDFNGKCIGTISSSQLLIDPDLSEAHTLRQWFDGGGRDASTQSISRDHT 466
Query: 466 AGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKK 525
++NE+ T+++IK+EGLG +KPDWVTV+A I F KSD+FCYTACP GDRQCNKK
Sbjct: 467 PAASRNEVRMTIAKIKDEGLGMGDKPDWVTVKASIIFFKSDNFCYTACPTKEGDRQCNKK 526
Query: 526 VTQ-SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYM 584
VT+ + W CDRC++E ECDYRYLLQ QIQD +G WVTAFQE+ +E+LGC A L +
Sbjct: 527 VTKGTSGLWVCDRCDKEFPECDYRYLLQLQIQDHSGTAWVTAFQETAQELLGCSA--LDL 584
Query: 585 LKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
+ Y+ D RF EI+ S +F YL RLK+KEE Y DE+RVK T+++ ++ + ++ESR+LL
Sbjct: 585 ITYKENGDPRFAEIMLSCLFQDYLLRLKVKEETYSDERRVKNTLVKVERFDPAAESRHLL 644
Query: 645 DLISKSF 651
DL+S+S
Sbjct: 645 DLLSRSM 651
>gi|357137873|ref|XP_003570523.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Brachypodium distachyon]
Length = 628
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/650 (54%), Positives = 475/650 (73%), Gaps = 32/650 (4%)
Query: 3 VNLTPNSISLINGGDVNSKPLVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQLNDRV 62
V LTPN++ + GDVN +P+VQV+D++ + + +R+R +SD V+T A+ A QL+
Sbjct: 4 VRLTPNAVEAVLAGDVNLRPIVQVLDVRCVNVSADRWRGNVSDGVNTVPALFAGQLSALA 63
Query: 63 KTGQVKKGSVVQLIDYICSTVQN--RKIIVVLNMETIILDCEPIGNPKIFSESELTAQKT 120
++G V+ G+++QL +Y+ + V R+IIVVLNM + +C+ IGNP I E+ L
Sbjct: 64 RSGAVRGGTILQLDEYVINNVGGGPRRIIVVLNMTVLRAECDIIGNPTITPETRL----- 118
Query: 121 IPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQ 180
P+ N + N P S S +TP +AP FQ
Sbjct: 119 -PNQNHSGAEQFNGIRQP--------------SVAANSLNTPTMLGHQAP-------VFQ 156
Query: 181 PTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAR 240
PT QP Y+P P+++NHGPI KNEAPARIIPI++LNPYQGRWAIK RVTAKGD+RRY+NA+
Sbjct: 157 PTAQPSYRPAPSYKNHGPIAKNEAPARIIPISSLNPYQGRWAIKGRVTAKGDIRRYHNAK 216
Query: 241 GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNE 300
G+GKVF+FDLLDSDGGEIRVTCFN +VDRFYE++EVG+VY++S+G+LKPAQKNFNHL NE
Sbjct: 217 GEGKVFNFDLLDSDGGEIRVTCFNDLVDRFYEVVEVGKVYVVSRGNLKPAQKNFNHLNNE 276
Query: 301 WEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILR 360
WEI L+ S+VDLC +E+ SIP Q+F+FR ISE+E N +I+D+IG+VISV+P I +
Sbjct: 277 WEIVLDNGSSVDLCPDENSSIPSQRFNFRPISEVEDTPNATILDMIGVVISVSPCTTIQK 336
Query: 361 KNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFS 420
KNGMETQ+RI+NLKD SGRSV++T+WG+FCN+EG +LQE V+ G FPVL+VK+G+VNDF
Sbjct: 337 KNGMETQKRIINLKDMSGRSVDVTMWGEFCNREGSQLQETVERGVFPVLAVKTGRVNDFG 396
Query: 421 GKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQI 480
GKS+GTI S+QL I+PD EAH LR+WFD GG++A+T SISR+ ++N I KTV+QI
Sbjct: 397 GKSVGTISSSQLLIDPDIVEAHSLRQWFDGGGRDASTQSISRDATPAASRNAIRKTVAQI 456
Query: 481 KNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCN 539
K EGLG +KPDWVTV+A + F K+++FCYT+CP GDRQCNKKVT+ + W CD+CN
Sbjct: 457 KEEGLGMEDKPDWVTVKASVIFFKNENFCYTSCPNKEGDRQCNKKVTKGTSGLWYCDKCN 516
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEII 599
+E ECDYRYLLQ QIQD +G WVTAFQE+G+E+LG A +L K E +D RF E +
Sbjct: 517 REFTECDYRYLLQLQIQDHSGTAWVTAFQEAGQELLGVSASDLSRFKEE--EDPRFAETM 574
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+F YL RLK+KEE YGDE+RVK T+ + ++ + + ES+YLLD IS+
Sbjct: 575 LRCLFQDYLLRLKVKEETYGDERRVKNTLAKVERFDPAGESKYLLDTISR 624
>gi|224122534|ref|XP_002330505.1| predicted protein [Populus trichocarpa]
gi|222872439|gb|EEF09570.1| predicted protein [Populus trichocarpa]
Length = 502
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/493 (74%), Positives = 416/493 (84%), Gaps = 19/493 (3%)
Query: 113 SELTAQKTIPSNNLPQP--VRVNNYSAPNSGT--------FNLQNSG--------TFNSQ 154
S+ AQK +P+ + Q V NN S+ + G+ + QN G T ++Q
Sbjct: 3 SDAPAQKALPNTDSMQSSMVDYNNPSSQSHGSNMHSIRPALSSQNHGGNMQSFRPTSSTQ 62
Query: 155 NPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAAL 214
N GS A N G+ V+SF+PTVQPPYQPPP++RNHG ++KNEAPARIIPI AL
Sbjct: 63 NQGSKMRSFQPALGAQNYGNDVQSFRPTVQPPYQPPPSYRNHGAVMKNEAPARIIPINAL 122
Query: 215 NPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEII 274
NPYQGRWAIKAR+TAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFY+++
Sbjct: 123 NPYQGRWAIKARITAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYDVV 182
Query: 275 EVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEI 334
EVG+VYLISKGSLKPAQKNFNHLKN+WEIFLEATSTVDLC EED SIP+QQFSF+ ISEI
Sbjct: 183 EVGKVYLISKGSLKPAQKNFNHLKNDWEIFLEATSTVDLCPEEDGSIPQQQFSFKPISEI 242
Query: 335 ESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEG 394
E AENNSI DVIG+VISVNPSVPILRKNGMETQRRILNLKD SG +VELTLWGDFCNKEG
Sbjct: 243 EIAENNSIFDVIGVVISVNPSVPILRKNGMETQRRILNLKDGSGWTVELTLWGDFCNKEG 302
Query: 395 QKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKN 454
QKLQEMVD GFFP+L+VK+GKV+DF+GKS+GTI STQLFINPD EAH ++WFD GG++
Sbjct: 303 QKLQEMVDSGFFPILAVKAGKVSDFNGKSLGTISSTQLFINPDIPEAHAAKDWFDRGGRD 362
Query: 455 AATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACP 514
A++SIS++IA GG KNE+ KTVSQ+K EGLGRS+KPDW TVRA ++FIK+D+FCYTACP
Sbjct: 363 VASMSISKDIAQGGPKNEVRKTVSQVKLEGLGRSDKPDWATVRASVSFIKTDTFCYTACP 422
Query: 515 LMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEE 573
LMIGDRQCNKKVT+SGN RWQCDRCNQE D+CDYRYLLQ QIQD TGLTW TAFQESGEE
Sbjct: 423 LMIGDRQCNKKVTRSGNSRWQCDRCNQEFDDCDYRYLLQVQIQDHTGLTWATAFQESGEE 482
Query: 574 ILGCPAKELYMLK 586
ILG PAKELY+LK
Sbjct: 483 ILGYPAKELYLLK 495
>gi|356529769|ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Glycine max]
Length = 894
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/696 (52%), Positives = 481/696 (69%), Gaps = 46/696 (6%)
Query: 1 MPVNLTPNSISLINGGDVNS--KPLVQVMDIKLIGSTQ----ERYRFLISDSVSTQHAML 54
M V+LT ++I + + +P++QV+++KL+ S Q ERYR ++SD Q ML
Sbjct: 1 MAVSLTQSAIMEMCSANCPEGLQPVLQVIELKLVQSQQNSNVERYRLVLSDGSHYQQGML 60
Query: 55 ATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCE----PIGNPKIF 110
ATQ ND V G+++KGSVV+L +IC+ VQ+RKII++++++ ++ CE P+ PK
Sbjct: 61 ATQKNDLVHAGKLQKGSVVRLTQFICNVVQSRKIIIIVDLDVVLDKCELIGEPVPAPKDA 120
Query: 111 SESELTAQKTIPSNNLPQ-----------PVRVNNYS-APNSGTFNLQNSGTFNSQNPGS 158
T Q + S N PQ P R N S +P+ N SG ++S P +
Sbjct: 121 PTESATGQSGVTSGN-PQLLNSSSHTGGMPARPNVASPSPDHPKVNPSASGVYSSNAPPT 179
Query: 159 F---------STPNSGTFRAPNAG------SIVRSFQ-----PTVQPPY-QPPPNFRNHG 197
+ S P SG+ N G R Q P QP Y QP P + N
Sbjct: 180 YPKVEHGVSRSAPFSGSSGGQNTGFRNPQFEASRPLQNSYARPPQQPMYRQPSPMYTNRA 239
Query: 198 PILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGE 257
P+ +NEA RIIPIAALNPYQ W IKARVT KG+LR Y NARGDGKVFSFDLLDSDGGE
Sbjct: 240 PMGRNEAAPRIIPIAALNPYQSMWTIKARVTFKGELRHYTNARGDGKVFSFDLLDSDGGE 299
Query: 258 IRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEE 317
IR TCFNAV D+FY +IE G+VYLIS+GS+KPAQKNFNHL+N+ E+ L+ S + C ++
Sbjct: 300 IRATCFNAVADQFYNVIEAGKVYLISRGSIKPAQKNFNHLRNDQELTLDVASIIQPCLDD 359
Query: 318 DDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTS 377
+DSIP Q F++R ISEIES ENNSIVDVIG+V S++P+ I+RKNG E Q+R L LKD S
Sbjct: 360 NDSIPSQTFNYRPISEIESLENNSIVDVIGVVTSISPTASIMRKNGTEVQKRTLQLKDMS 419
Query: 378 GRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPD 437
GRSVELTLWG+FC EGQ+LQ + D G FPVL+ K+ +VNDF+GKS+GTI ++QL++ PD
Sbjct: 420 GRSVELTLWGNFCIVEGQRLQTICDAGEFPVLATKAVRVNDFNGKSVGTIATSQLYVEPD 479
Query: 438 FAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVR 497
F EA L+ WF++ GK+ T+SISREI+ G K ++ KT+SQIK+E LG SEKPDW++V
Sbjct: 480 FPEACTLKRWFENEGKSVPTLSISREISNLG-KTDVRKTISQIKDEKLGTSEKPDWISVF 538
Query: 498 AFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQ 556
A ++ IK D+FCY CPL IGDRQCNKKVT + + W C+RCNQ ID CD+RYLL QIQ
Sbjct: 539 AAVSHIKVDNFCYPGCPLKIGDRQCNKKVTNNADGTWHCERCNQSIDTCDFRYLLSMQIQ 598
Query: 557 DQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEE 616
D TG+TWVTAFQESGEEI+G PAK+LY +KYE QDD +F EI +F +Y+F+L+IKEE
Sbjct: 599 DHTGITWVTAFQESGEEIMGIPAKDLYYMKYEEQDDDKFSEIFHKVLFTEYMFKLRIKEE 658
Query: 617 LYGDEQRVKITVIRADQVNYSSESRYLLDLISKSFR 652
Y DEQR+K T+++A++VN++S+SR L+LI R
Sbjct: 659 FYSDEQRIKSTIVKAEKVNFASKSRVNLELIFNELR 694
>gi|168050100|ref|XP_001777498.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671116|gb|EDQ57673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 632
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/660 (53%), Positives = 473/660 (71%), Gaps = 44/660 (6%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLIGSTQ---ERYRFLISDSVSTQHAMLATQ 57
M + LT N+I +N GDV +P++Q++D++ IG++Q ER+R ++SD V Q AMLATQ
Sbjct: 1 MGMLLTSNAIVALNNGDVELRPVLQIVDVRQIGNSQTTTERFRLVLSDGVHLQQAMLATQ 60
Query: 58 LNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIF---SESE 114
LN++VK KGS+VQL++YIC+TVQNRKII+VLNME + E IG+PK E +
Sbjct: 61 LNEKVKNNLAVKGSIVQLLEYICNTVQNRKIIIVLNMEIVETKAEIIGDPKHLIAGGEHQ 120
Query: 115 LTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGS 174
P QP Q P STP+S T A N+GS
Sbjct: 121 APGPGPGPGPGSLQP-----------------------QQPPPRISTPSSATVSA-NSGS 156
Query: 175 IVRSFQPTVQP---------PYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKA 225
+ QP YQP P + N GPI+KNEAPARIIPIAALNPYQGRW IKA
Sbjct: 157 RA-GYGQQGQPQNSYGRPMAAYQPAPVYGNRGPIVKNEAPARIIPIAALNPYQGRWTIKA 215
Query: 226 RVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKG 285
RVT+KG++RR++NA+G+GKVFSFD+LD+DGGEIR TCFN VVD+F++ IEVG+VYLISKG
Sbjct: 216 RVTSKGEIRRFHNAKGEGKVFSFDMLDADGGEIRATCFNNVVDQFHDRIEVGKVYLISKG 275
Query: 286 SLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDV 345
SLK AQKNFNHLKN+WEIFLE+ ST++ C +ED SIP+Q + FR ISE+ + ENN+++D+
Sbjct: 276 SLKAAQKNFNHLKNDWEIFLESQSTIEPCYDEDSSIPQQHYDFRPISEVATLENNAMIDI 335
Query: 346 IGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGF 405
IG+V+S+ P+V I RKNG+ETQ+R L LKD S RSVELT+WG+FCNKEGQ+LQ++ D G
Sbjct: 336 IGVVMSITPTVTITRKNGLETQKRSLQLKDMSNRSVELTMWGNFCNKEGQELQDLCDSGA 395
Query: 406 FPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIA 465
PVL+VK+G+V+DFSGKS+GTI STQL INPD EA ++R+WF+ G N+ TV +SRE
Sbjct: 396 NPVLAVKAGRVSDFSGKSVGTISSTQLVINPDHPEARKVRDWFNREGMNSTTVFLSREGG 455
Query: 466 AGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKK 525
G + E KTV+ IK+EGLGR +KPDW+T+RA + +IK ++FCY+ACPL + +QC KK
Sbjct: 456 G-GGRLEQRKTVAAIKDEGLGRGDKPDWITIRATVFYIKPENFCYSACPLEVNGKQCMKK 514
Query: 526 VTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYM 584
VT +G+ W+CDRC++ + ECDYRYLL Q+QD TG TW+T FQE+GEE++ AKEL++
Sbjct: 515 VTNNGDGTWRCDRCDRSVPECDYRYLLSIQVQDHTGPTWITVFQETGEELMHHTAKELFL 574
Query: 585 LKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
+ + RF E I+ F +++F+LK+KEE Y DEQR K T+++ D +++ SES+ +L
Sbjct: 575 --WSQDEPQRFSEAIQKLTFMKHIFKLKVKEETYNDEQRTKSTLVKVDPMDWISESKLML 632
>gi|168046036|ref|XP_001775481.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673151|gb|EDQ59678.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 626
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/653 (53%), Positives = 470/653 (71%), Gaps = 36/653 (5%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLIGSTQ---ERYRFLISDSVSTQHAMLATQ 57
M + LT N+I +N GDV +P++Q++DI+ IG+ Q ER+R ++SD V Q AMLATQ
Sbjct: 1 MAMMLTSNAIVALNNGDVELRPVLQIVDIRQIGNAQTTTERFRLVLSDGVHLQQAMLATQ 60
Query: 58 LNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIF-----SE 112
LN++VK KGS+VQL++YIC+TVQNRKII+VLNME + + IG+PK +
Sbjct: 61 LNEKVKNNLAVKGSIVQLLEYICNTVQNRKIIIVLNMEIVESKADIIGDPKHLVAGGEHQ 120
Query: 113 SELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNA 172
+ S+ L QP + S P + T N G + P A
Sbjct: 121 AGPGPGPGPGSSQLQQP----SPSLPKNTTANGVGVGY-------GQQGQQQNAYGRPMA 169
Query: 173 GSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGD 232
YQP P + N GPI+KNEAPARIIPIAALNPYQGRW IKAR+TAKG+
Sbjct: 170 A-------------YQPAPVYGNRGPIVKNEAPARIIPIAALNPYQGRWTIKARITAKGE 216
Query: 233 LRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQK 292
+RR++NA+G+GKVFSFD+LD+DGGEIR TCFN VVD+F+E IEVG+VYLISKGSLK AQK
Sbjct: 217 IRRFHNAKGEGKVFSFDMLDADGGEIRATCFNNVVDQFHERIEVGKVYLISKGSLKAAQK 276
Query: 293 NFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV 352
NFNHLKN+WEIFLE+ +T++ C EED SIP+Q + F+ ISE+E+ ENN+++D++G+V+S+
Sbjct: 277 NFNHLKNDWEIFLESQTTIEPCYEEDSSIPQQHYDFKPISEVEALENNAMIDIVGVVMSI 336
Query: 353 NPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVK 412
NP+ I+RKNG+ETQ+R L +KD S RSVELT+WG FC+KEGQ+LQ++ D G PVL+VK
Sbjct: 337 NPTTTIMRKNGLETQKRSLQMKDMSNRSVELTMWGSFCSKEGQELQDLCDSGANPVLAVK 396
Query: 413 SGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNE 472
+G+V+DFSGKS+GTI STQL INPD EA +R+WF+ GKN ATVS+SRE GG +
Sbjct: 397 AGRVSDFSGKSVGTISSTQLAINPDHPEARRVRDWFEREGKNTATVSLSREGGGGGRLEQ 456
Query: 473 IHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN- 531
KTV+ IK+EGLGR +KPDW+TVRA + +IK ++FCY ACPL + +QC KKVT +G+
Sbjct: 457 -RKTVAAIKDEGLGRGDKPDWITVRATVFYIKPENFCYPACPLEVNGKQCMKKVTNNGDG 515
Query: 532 RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQD 591
W+CDRC++ + ECDYRYLL Q+QD TG TW+T FQE+GEE++ AKEL++ + +
Sbjct: 516 TWRCDRCDRSVPECDYRYLLSIQVQDHTGPTWITVFQETGEELMQHTAKELFL--WSQDE 573
Query: 592 DVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
RF E I+ F +++F+LK+KEE Y DEQR K T+++ D++++ SE++ +L
Sbjct: 574 PQRFSEAIQKLTFTKHVFKLKVKEETYNDEQRTKSTLVKVDRMDWVSENKLML 626
>gi|302774432|ref|XP_002970633.1| hypothetical protein SELMODRAFT_441216 [Selaginella moellendorffii]
gi|300162149|gb|EFJ28763.1| hypothetical protein SELMODRAFT_441216 [Selaginella moellendorffii]
Length = 815
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/716 (48%), Positives = 469/716 (65%), Gaps = 70/716 (9%)
Query: 4 NLTPNSISLINGGDVNSKPLVQVMDIKLIGS---TQERYRFLISDSVSTQHAMLATQLND 60
+LTPN+I + GGD+ +P+VQV+D+K IGS QERYR ++SD + Q AMLATQLN+
Sbjct: 5 SLTPNAIVALLGGDLELRPIVQVLDVKQIGSNQNVQERYRLVLSDGTAVQQAMLATQLNE 64
Query: 61 RVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCE--------------PIGN 106
VK G + K S+V+L +YIC+TV++RKI++VLN++ ++ + E P GN
Sbjct: 65 VVKNGTLMKSSIVKLQEYICNTVKDRKIVIVLNLDVLVSNAEMSDQPPGAVVDPPGPSGN 124
Query: 107 PKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGT 166
+ S + S+ +P V+++ + + T + G + +S
Sbjct: 125 QTASAVSSYGGRPAEVSSFGGRPTEVSSFGGRQAEATSFGGRPTETNSLGGRAAEGSSIG 184
Query: 167 FRAPNAGSIVRSFQPTVQP-------------------PYQPPPNFR------------- 194
R P GS P V P PY P R
Sbjct: 185 GRTPEPGSFGGQATPAVSPYGRPAEPGSFGGQATPAVSPYGRPAEARRETVAYGGRPAES 244
Query: 195 -----------------NHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYN 237
N GPI +NE P ++PIAALNPY GRW IKAR+T+K DLRR+N
Sbjct: 245 IGSYAPNPPYGPPPTYTNRGPIARNEGPPGLVPIAALNPYHGRWTIKARITSKSDLRRFN 304
Query: 238 NARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHL 297
NARGDG+VFSFDLLD++GGEIRVTCFN V D FYE +VGR+Y++SKGSL+ AQK FNHL
Sbjct: 305 NARGDGRVFSFDLLDAEGGEIRVTCFNNVADEFYERAQVGRLYMVSKGSLRAAQKQFNHL 364
Query: 298 KNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVP 357
KN+WEI E S +D C E D S+P+Q F F+ +SEIE+ NN++VD IG+V+ VN +
Sbjct: 365 KNDWEIMFEKDSVLDPCPE-DSSVPQQVFDFKQVSEIENLPNNAMVDAIGVVVGVNQTTT 423
Query: 358 ILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVN 417
I+RKNG ETQRR L L+D SG+SVE+T+WG+FC +EGQ LQE+ D G P+L++K+G+V+
Sbjct: 424 IMRKNGTETQRRTLQLRDRSGKSVEITMWGNFCTQEGQHLQELCDSGQSPILAIKAGRVS 483
Query: 418 DFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTV 477
DFSGKS+GTI ST+ INPD EA L+ WF+ G++A SISRE A GG + E KTV
Sbjct: 484 DFSGKSLGTISSTRFQINPDHPEARSLQLWFEREGRHAQAQSISREGAGGGGRTENRKTV 543
Query: 478 SQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCD 536
SQIK+EGLGRSEKPD+VT+RA I FIK+DSFCYTACPL IGDRQC+KKVT +G+ W+C+
Sbjct: 544 SQIKDEGLGRSEKPDFVTIRATIHFIKTDSFCYTACPLQIGDRQCSKKVTNNGDGTWRCE 603
Query: 537 RCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFG 596
RC++ + ECDYRY+L Q+ D TG TW+T FQE+ EE+LG AK+L+M K E D+ RF
Sbjct: 604 RCDRTVPECDYRYMLSIQVMDHTGATWLTGFQEAAEELLGVKAKDLFMWKQE--DNGRFL 661
Query: 597 EIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSFR 652
+ I S F Q+ F+++IKEE + DEQRVK+ + RA+++++ +ES+Y++D I K R
Sbjct: 662 DHIASIQFTQHHFKVRIKEESFNDEQRVKVNIQRAEKLDFVAESKYMIDAIGKLRR 717
>gi|297846122|ref|XP_002890942.1| hypothetical protein ARALYDRAFT_313748 [Arabidopsis lyrata subsp.
lyrata]
gi|297336784|gb|EFH67201.1| hypothetical protein ARALYDRAFT_313748 [Arabidopsis lyrata subsp.
lyrata]
Length = 822
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/711 (47%), Positives = 479/711 (67%), Gaps = 69/711 (9%)
Query: 1 MPVNLTPNSISLINGGDVNSK----PLVQVMDIKLIGSTQERYRFLISDSVSTQHAMLAT 56
M VNLT +I+ I G+V+S+ P++QV ++K+I S RY+FL+SD + Q ML T
Sbjct: 1 MAVNLTAGAITKILNGEVSSEIDLMPVLQVTELKMIQSN--RYKFLLSDGIHLQAGMLNT 58
Query: 57 QLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNP--------- 107
LN V G ++ GS+V+L Y+CS +Q R+I++++ +E I+ C+ IG P
Sbjct: 59 TLNSLVIQGSIQLGSIVRLTHYVCSLIQGRRIVIIMQLEVIVAKCDIIGTPNEPGQRGGA 118
Query: 108 --------------KIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNS 153
+ S++ + S N PQP+ V ++ ++G + + S +
Sbjct: 119 AVPVNTQSNGGFDQQQARRSDVNGGRYGVSANSPQPL-VGGLNSSDAGRYGV--SASLAQ 175
Query: 154 QNPGSFSTPNSGTF--------------------------------RAPNAGSIVRSFQP 181
G + P G P A ++
Sbjct: 176 PQVGGLTVPMLGDMVQRYGTGSGYPETSPSTRPYVSSNAGYGGSRQEQPRAPPATTAYSR 235
Query: 182 TVQPPYQP--PPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNA 239
VQ YQP PP + N GP+ +NEAP RIIPIAALNPYQGRW IK RV++K +LRR+NN
Sbjct: 236 PVQSAYQPQQPPMYVNRGPVARNEAPPRIIPIAALNPYQGRWTIKVRVSSKAELRRFNNP 295
Query: 240 RGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKN 299
RG+GK+FSFDLLD+DGGEIRVTCFN VD+F++ I VG VYLIS+G+LKPAQKN+NHL N
Sbjct: 296 RGEGKLFSFDLLDADGGEIRVTCFNDAVDQFFDQIVVGNVYLISRGNLKPAQKNYNHLPN 355
Query: 300 EWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPIL 359
++EI L++ ST+ C E+D +IP+ QF FR+IS+IE+ E+NS+ D+IGIV S+ +VPI+
Sbjct: 356 DYEIHLDSASTIQRC-EDDGTIPRNQFHFRNISDIENMESNSMTDLIGIVSSIGTTVPIM 414
Query: 360 RKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDF 419
RKNG E +R L LKD SGRSVE+T+WG+FC+ EGQ+LQ + D G FPVL++K+G++ +F
Sbjct: 415 RKNGTEVDKRALQLKDMSGRSVEVTMWGNFCSAEGQQLQNLCDSGVFPVLALKAGRIGEF 474
Query: 420 SGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQ 479
+GK + TI S+Q F+ PDF EA ELR+W++ G+NA SISRE +G + E+ K ++Q
Sbjct: 475 NGKQVSTIGSSQFFVEPDFPEARELRQWYEREGRNANFTSISREF-SGVGRQEVRKVITQ 533
Query: 480 IKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRC 538
IK+E LG SEKPDW+TV A I+F+K ++FCYTACP+M GDR C+KKVT +G+ W+C++C
Sbjct: 534 IKDEKLGTSEKPDWITVCATISFMKVENFCYTACPIMNGDRPCSKKVTNNGDGTWRCEKC 593
Query: 539 NQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEI 598
++ +DECDYRY+LQ Q+QD TGLTW TAFQE+GEEI+G AK+LY +KYE Q++ +F +I
Sbjct: 594 DKCVDECDYRYILQIQLQDHTGLTWATAFQEAGEEIMGMSAKDLYYVKYENQEEEKFEDI 653
Query: 599 IRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
IRS F +Y+F+LKIKEE Y DEQRVK TV++A+++NY+S +R +L+ + K
Sbjct: 654 IRSVAFTKYIFKLKIKEETYSDEQRVKATVVKAEKLNYASNTRCMLEAMDK 704
>gi|15242405|ref|NP_199353.1| replication factor-A protein 1-like protein [Arabidopsis thaliana]
gi|9758730|dbj|BAB09168.1| replication protein A1-like [Arabidopsis thaliana]
gi|332007861|gb|AED95244.1| replication factor-A protein 1-like protein [Arabidopsis thaliana]
Length = 853
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/741 (47%), Positives = 484/741 (65%), Gaps = 94/741 (12%)
Query: 1 MPVNLTPNSISLINGGDVNSK----PLVQVMDIKLIGS-------TQERYRFLISDSVST 49
M V+LT + + G+V S+ P++QV ++KLI S + RY+FL+SD
Sbjct: 1 MAVSLTEGVVMKMLNGEVTSETDMMPVLQVTELKLIQSKLHQNQESSNRYKFLLSDGTDL 60
Query: 50 QHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKI 109
ML T LN V G ++ GSV++L YIC+ +Q R+I+V++ +E I+ C IGNPK
Sbjct: 61 AAGMLNTSLNSLVNQGTIQLGSVIRLTHYICNLIQTRRIVVIMQLEVIVEKCNIIGNPKE 120
Query: 110 FSESELTAQK---TIPSN----------------------NLPQPVRVNN---------- 134
S + Q+ SN N PQP V+N
Sbjct: 121 PGHSSINPQRGGVNTQSNGGSEQQQARRSDVNGGRYGVSANSPQPQVVHNSSDAGRYCVS 180
Query: 135 ---------YSAPNSGTFNL-----QNSGTFNSQNPGSF-----------------STPN 163
+S+ ++G + + Q NS + G + ++P+
Sbjct: 181 ANSPQPQVVHSSSDAGRYGVSANSPQRQVVHNSPDAGRYGQPQVSQRYGTGSGYPETSPS 240
Query: 164 SGTFRAPNAG------------SIVRSFQPTVQPPYQP--PPNFRNHGPILKNEAPARII 209
+ + + NAG + ++ VQ YQP PP + N GP+ +NEAP RI
Sbjct: 241 TRPYVSSNAGYGGSRQDQPRAPTATTAYSRPVQSAYQPQQPPMYVNRGPVARNEAPPRIN 300
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
PIAALNPYQGRW IK RVT+K DLRR+NN RG+GK+FSFDLLD+DGGEIRVTCFN VD+
Sbjct: 301 PIAALNPYQGRWTIKVRVTSKADLRRFNNPRGEGKLFSFDLLDADGGEIRVTCFNDAVDQ 360
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFR 329
F++ I VG VYLIS+G+LKPAQKNFNHL N++EI L++ ST+ C E+D +IP+ F FR
Sbjct: 361 FFDKIVVGNVYLISRGNLKPAQKNFNHLPNDYEIHLDSASTIQPC-EDDGTIPRYHFHFR 419
Query: 330 HISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDF 389
+I +IE+ ENNS DVIGIV S++P+V I+RKN E Q+R L LKD SGRSVE+T+WG+F
Sbjct: 420 NIGDIENMENNSTTDVIGIVSSISPTVAIMRKNLTEVQKRSLQLKDMSGRSVEVTMWGNF 479
Query: 390 CNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFD 449
CN EGQKLQ + D G FPVL++K+G++ +F+GK + TI ++Q FI PDF EA ELR+W++
Sbjct: 480 CNAEGQKLQNLCDSGVFPVLALKAGRIGEFNGKQVSTIGASQFFIEPDFPEARELRQWYE 539
Query: 450 SGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFC 509
G+NA SISRE +G + E+ K ++QIK+E LG SEKPDW+TV A I+F+K ++FC
Sbjct: 540 REGRNAHFTSISREF-SGVGRQEVRKVIAQIKDEKLGTSEKPDWITVCATISFMKVENFC 598
Query: 510 YTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQ 568
YTACP+M GDR C+KKVT +G+ W+C++C++ +DECDYRY+LQ Q+QD T LTW TAFQ
Sbjct: 599 YTACPIMNGDRPCSKKVTNNGDGTWRCEKCDKCVDECDYRYILQIQLQDHTDLTWATAFQ 658
Query: 569 ESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITV 628
E+GEEI+G AK+LY +KYE QD+ +F +IIRS F +Y+F+LKIKEE Y DEQRVK TV
Sbjct: 659 EAGEEIMGMSAKDLYYVKYENQDEEKFEDIIRSVAFTKYIFKLKIKEETYSDEQRVKATV 718
Query: 629 IRADQVNYSSESRYLLDLISK 649
++A+++NYSS +R++L+ I K
Sbjct: 719 VKAEKLNYSSNTRFMLEAIDK 739
>gi|302770080|ref|XP_002968459.1| hypothetical protein SELMODRAFT_89304 [Selaginella moellendorffii]
gi|300164103|gb|EFJ30713.1| hypothetical protein SELMODRAFT_89304 [Selaginella moellendorffii]
Length = 636
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/649 (51%), Positives = 452/649 (69%), Gaps = 22/649 (3%)
Query: 4 NLTPNSISLINGGDVNSKPLVQVMDIKLIGS---TQERYRFLISDSVSTQHAMLATQLND 60
+LTPN+I + GGD+ +P+VQV+D+K IGS QERYR ++SD + Q AMLATQLN+
Sbjct: 5 SLTPNAIVALLGGDLELRPIVQVLDVKQIGSNQNVQERYRLVLSDGTAVQQAMLATQLNE 64
Query: 61 RVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNP-KIFSESELTAQK 119
VK G + K S+V+L +YIC+TV++RKI++VLN++ + G P + S A+
Sbjct: 65 VVKNGTLMKSSIVKLQEYICNTVKDRKIVIVLNLDVLAEATSFGGRPTETNSLGGRAAEG 124
Query: 120 TIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSF 179
+ P+P + P + + G + G++ ++
Sbjct: 125 SSIGGRTPEPGSFGGQATPAVSPYGRPAEARRETIAYGGRPAESMGSYAPNPPYGPPPTY 184
Query: 180 QPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNA 239
N GPI +NE P ++PIAALNPY GRW IKAR+T+K DLRR+NNA
Sbjct: 185 T--------------NRGPIARNEGPPGLVPIAALNPYHGRWTIKARITSKSDLRRFNNA 230
Query: 240 RGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKN 299
RGDG+VFSFDLLD++GGEIRVTCFN V D FYE +VGR+Y++SKGSL+ AQK FNHLKN
Sbjct: 231 RGDGRVFSFDLLDAEGGEIRVTCFNNVADEFYERAQVGRLYMVSKGSLRAAQKQFNHLKN 290
Query: 300 EWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPIL 359
+WEI E S +D C E D S+P+Q F F+ +SEIE+ NN++VD IG+V+ VN + I+
Sbjct: 291 DWEIMFEKDSVLDPCPE-DSSVPQQVFDFKQVSEIENLPNNAMVDAIGVVVGVNQTTTIM 349
Query: 360 RKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDF 419
RKNG ETQRR L L+D SG+SVE+T+WG+FC +EGQ LQE+ D G P+L++K+G+V+DF
Sbjct: 350 RKNGTETQRRTLQLRDRSGKSVEITMWGNFCTQEGQHLQELCDSGQSPILAIKAGRVSDF 409
Query: 420 SGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQ 479
SGKS+GTI ST+ INPD EA L+ WF+ G++A SISRE A GG + E KTVSQ
Sbjct: 410 SGKSLGTISSTRFQINPDHPEARSLQLWFEREGRHAQAQSISREGAGGGGRTENRKTVSQ 469
Query: 480 IKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRC 538
IK+EGLGRSEKPD+VT+RA I FIK+DSFCYTACPL IGDRQC+KKVT +G+ W+C+RC
Sbjct: 470 IKDEGLGRSEKPDFVTIRATIHFIKTDSFCYTACPLQIGDRQCSKKVTNNGDGTWRCERC 529
Query: 539 NQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEI 598
++ + ECDYRY+L Q+ D TG TW+T FQE+ EE+LG AK+L+M K E D+ RF +
Sbjct: 530 DRTVPECDYRYMLSIQVMDHTGATWLTGFQEAAEELLGVKAKDLFMWKQE--DNGRFLDH 587
Query: 599 IRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
I S F Q+ F+++IKEE + DEQRVK+ + RA+++++ +ES+Y++D I
Sbjct: 588 IASIQFTQHHFKVRIKEESFNDEQRVKVNIQRAEKLDFVAESKYMIDAI 636
>gi|224074474|ref|XP_002304377.1| predicted protein [Populus trichocarpa]
gi|222841809|gb|EEE79356.1| predicted protein [Populus trichocarpa]
Length = 701
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/515 (60%), Positives = 406/515 (78%), Gaps = 15/515 (2%)
Query: 136 SAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRN 195
S P+SG + QN+G N + P+ GS R Q Q QPPP + N
Sbjct: 46 SVPSSGLYVNQNAGYLNPRP----------EISQPHMGSYSRPPQSAYQ---QPPPMYSN 92
Query: 196 HGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDG 255
GP+ +NEAP RIIPI ALNPYQGRW IKARVTAKG+LR YNN RGDGKVFSFDLLDSDG
Sbjct: 93 RGPVARNEAPPRIIPITALNPYQGRWTIKARVTAKGELRHYNNTRGDGKVFSFDLLDSDG 152
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
GEIRVTCFN V D+FY IE GRVYLISKG+LKPAQKNFNHL+++ EIFLE+TST+ C
Sbjct: 153 GEIRVTCFNQVADQFYHQIEAGRVYLISKGNLKPAQKNFNHLRHDLEIFLESTSTIQPCF 212
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKD 375
E+D++IPKQQF FR IS++E ENNS+VDVIG+V S+ P+ ++RKNG ETQ+R L LKD
Sbjct: 213 EDDNTIPKQQFHFRPISDVEDMENNSVVDVIGVVTSIAPTTSLMRKNGTETQKRTLQLKD 272
Query: 376 TSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFIN 435
SGRSVELTLWG+FCN EGQ+LQ + D G FPVL+VKSG++++FSGK++GTI ++QLFI
Sbjct: 273 MSGRSVELTLWGNFCNAEGQRLQHICDSGGFPVLAVKSGRISEFSGKAVGTISTSQLFIE 332
Query: 436 PDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVT 495
PD EA+ L+EWFD G+N ++SISRE + G ++++ KT+SQIK+E LG SEKPDW+T
Sbjct: 333 PDSPEANRLKEWFDRDGRNTPSLSISRETSTLG-RSDVMKTISQIKDERLGTSEKPDWIT 391
Query: 496 VRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQ 554
V A + ++KSD+FCYTACP+M G+R CNKKVT +G+ +W+C++C+Q +DECDYRY+LQ Q
Sbjct: 392 VPATVIYVKSDNFCYTACPIMSGERPCNKKVTNNGDGKWRCEKCDQSVDECDYRYILQFQ 451
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIK 614
IQD TG++WVTAFQE GEEI+G AK+L+ LK+E QDD F +++R +F++Y+F+LK+K
Sbjct: 452 IQDHTGISWVTAFQECGEEIMGISAKDLHYLKHEQQDDEGFSKVLRQVLFSRYVFKLKVK 511
Query: 615 EELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
EE + DEQRVK TV+++++VNYSS+SR LLD++ K
Sbjct: 512 EETFSDEQRVKSTVVKSEKVNYSSQSRLLLDMMEK 546
>gi|297800136|ref|XP_002867952.1| hypothetical protein ARALYDRAFT_329623 [Arabidopsis lyrata subsp.
lyrata]
gi|297313788|gb|EFH44211.1| hypothetical protein ARALYDRAFT_329623 [Arabidopsis lyrata subsp.
lyrata]
Length = 801
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/678 (50%), Positives = 471/678 (69%), Gaps = 31/678 (4%)
Query: 1 MPVNLTPNSISLINGGDVNSK----PLVQVMDIKLIGS----TQERYRFLISDSVSTQHA 52
M V+LT +I I G+V ++ P++QV ++K + + T+ER+R +SD
Sbjct: 1 MEVSLTAGAIGKIMSGEVTTEADMIPVLQVTELKQLKAYQDPTRERFRMGLSDGTHLHQG 60
Query: 53 MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNP----- 107
MLAT LND VK G ++ GS+V+L + VQ R+I++V +E I + + IG+P
Sbjct: 61 MLATDLNDLVKQGTLQSGSIVRLTHFGVHVVQTRRIVIVRELEVIKSNSDIIGHPVPGGK 120
Query: 108 ---KIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTF---NLQNSGTFNSQN--PGSF 159
+ +ES + T +VNN S + F + + P S
Sbjct: 121 HNDQRGAESGIKLNTTGSDQQGLGVRQVNNIETGRSNAAMSPQVDQRPVFGTSSSVPAS- 179
Query: 160 STPNSGTFRAPNAGSIVRSFQPTVQPPYQ-------PPPNFRNHGPILKNEAPARIIPIA 212
+TP++ P+AG V PP PPP + N GP+++NEAP RIIPI
Sbjct: 180 TTPSTRVDSNPSAGHGVSRQDHARDPPTSYPRQPQPPPPMYANRGPVVRNEAPPRIIPIN 239
Query: 213 ALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYE 272
AL+PY GRW IKARVT K L++Y+N RG+GKVF+FDLLD+DGGEIRVTCFNAV D+F++
Sbjct: 240 ALSPYSGRWTIKARVTNKAALKQYSNPRGEGKVFNFDLLDADGGEIRVTCFNAVADQFFD 299
Query: 273 IIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHIS 332
I VG +YLIS+GSL+PAQKNFNHL N++EI L+ ST+ C EED +IP+QQF FR I
Sbjct: 300 QIVVGNLYLISRGSLRPAQKNFNHLPNDYEIMLDNASTIKQCYEEDAAIPRQQFHFRTIG 359
Query: 333 EIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNK 392
+IES ENNSI+DVIGIV S++P+V I RKNG T +R L LKD SGRSVE+T+WG+FCN
Sbjct: 360 DIESMENNSIIDVIGIVSSISPTVTITRKNGTATPKRSLQLKDMSGRSVEVTMWGNFCNA 419
Query: 393 EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGG 452
EGQ+LQ + D G FPVL+VK+G++++F+GK++ TI S+QLFI+PDF EAH+L++WF+ G
Sbjct: 420 EGQRLQNLCDSGEFPVLAVKAGRISEFNGKTVSTIGSSQLFIDPDFVEAHKLKDWFEREG 479
Query: 453 KNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTA 512
K+ +S+SRE +G + ++ KT+SQIK+E LG SEKPDW+TV A I ++K ++FCYTA
Sbjct: 480 KSVPCISLSREF-SGSGRVDVRKTISQIKDEKLGTSEKPDWITVSATIIYMKVENFCYTA 538
Query: 513 CPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESG 571
CP+M GDR C+KKVT +G+ W+C++C++ +DECDYRY+LQ QIQD T LTWVTAFQE+G
Sbjct: 539 CPIMNGDRPCSKKVTDNGDGTWRCEKCDKSVDECDYRYILQLQIQDHTDLTWVTAFQEAG 598
Query: 572 EEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRA 631
EEI+G AK+LY +KYE D+ +F +IIR F +Y+F+LK+KEE + DEQRVK TV++
Sbjct: 599 EEIMGISAKDLYYVKYEHNDEEKFEDIIRKVAFTKYIFKLKVKEETFSDEQRVKATVVKV 658
Query: 632 DQVNYSSESRYLLDLISK 649
D++NYSS++R +LD + K
Sbjct: 659 DKLNYSSDTRTILDAMDK 676
>gi|186512039|ref|NP_567576.2| replication factor A1 [Arabidopsis thaliana]
gi|332658747|gb|AEE84147.1| replication factor A1 [Arabidopsis thaliana]
Length = 784
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/676 (49%), Positives = 464/676 (68%), Gaps = 34/676 (5%)
Query: 1 MPVNLTPNSISLINGGDVNSK----PLVQVMDIKLIGS----TQERYRFLISDSVSTQHA 52
M V+LT +I I G+V ++ P++QV D+K I + T+ER+R ++SD
Sbjct: 1 MEVSLTAGAIGKIMNGEVTTEADMIPVLQVTDLKQIMAQQDPTRERFRMVLSDGTYLHQG 60
Query: 53 MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSE 112
ML T LN+ VK G ++ GS+V+L ++ ++ R+I++V +E + + IG+P +
Sbjct: 61 MLGTDLNNLVKEGTLQPGSIVRLTRFVGDVIKGRRIVIVPQLEVLKQISDIIGHPVPGGK 120
Query: 113 --SELTAQKTIPSNNLPQP----VRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGT 166
+ A I N Q +VNN S G S P S +TP++
Sbjct: 121 HNDQRGADSGIKFNTTEQQGSGIRQVNNIEPGRSNAAISPQVGGTGSSVPAS-TTPSTRA 179
Query: 167 FRAPNAGSIVRSFQPTVQPPYQPPPN------------FRNHGPILKNEAPARIIPIAAL 214
+ P++G+ V T Q + PP + N GP+ +NEAP +IIP+ AL
Sbjct: 180 YSNPSSGNGV-----TRQDYARDPPTSYPHQPQPPPPMYANRGPVARNEAPPKIIPVNAL 234
Query: 215 NPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEII 274
+PY GRW IKARVT K L++Y+N RG+GKVF+FDLLD+DGGEIRVTCFNAV D+FY+ I
Sbjct: 235 SPYSGRWTIKARVTNKAALKQYSNPRGEGKVFNFDLLDADGGEIRVTCFNAVADQFYDQI 294
Query: 275 EVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEI 334
VG +YLIS+GSL+PAQKNFNHL+N++EI L+ ST+ C EED +IP+ QF FR I +I
Sbjct: 295 VVGNLYLISRGSLRPAQKNFNHLRNDYEIMLDNASTIKQCYEEDAAIPRHQFHFRTIGDI 354
Query: 335 ESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEG 394
ES ENN IVDVIGIV S++P+V I RKNG T +R L LKD SGRSVE+T+WGDFCN EG
Sbjct: 355 ESMENNCIVDVIGIVSSISPTVTITRKNGTATPKRSLQLKDMSGRSVEVTMWGDFCNAEG 414
Query: 395 QKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKN 454
Q+LQ + D G FPVL+VK+G++++F+GK++ TI S+QLFI+PDF EA +L+ WF+ GK+
Sbjct: 415 QRLQSLCDSGVFPVLAVKAGRISEFNGKTVSTIGSSQLFIDPDFVEAEKLKNWFEREGKS 474
Query: 455 AATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACP 514
+S+SRE +G K ++ KT+SQIK+E LG SEKPDW+TV A I ++K D+FCYTACP
Sbjct: 475 VPCISLSREF-SGSGKVDVRKTISQIKDEKLGTSEKPDWITVSATILYLKFDNFCYTACP 533
Query: 515 LMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEE 573
+M GDR C+KKVT +G+ W+C++C++ +DECDYRY+LQ QIQD T LT VTAFQE+GEE
Sbjct: 534 IMNGDRPCSKKVTDNGDGTWRCEKCDKSVDECDYRYILQLQIQDHTDLTCVTAFQEAGEE 593
Query: 574 ILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQ 633
I+G AK+LY +K E +D+ +F +IIR F +Y F+LK+KEE + DEQRVK TV++ D+
Sbjct: 594 IMGISAKDLYYVKNEHKDEEKFEDIIRKVAFTKYNFKLKVKEETFSDEQRVKATVVKVDK 653
Query: 634 VNYSSESRYLLDLISK 649
+NYS+++R +L + K
Sbjct: 654 LNYSADTRTMLGAMDK 669
>gi|357484641|ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
gi|355513943|gb|AES95566.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 1723
Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 352/713 (49%), Positives = 471/713 (66%), Gaps = 68/713 (9%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLIGSTQ----ERYRFLISDSVSTQHAMLAT 56
M VNLT +I + + P++QV+D+KL+ S Q ERYR ++SD + Q MLAT
Sbjct: 1 MAVNLTQGAIVTMCFTSEDLHPVLQVIDLKLVQSQQNSGTERYRVVLSDGLHYQQGMLAT 60
Query: 57 QLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELT 116
Q N+ V +G+++KGS+V+L +IC+ VQNRKII++++++ I+ C+ IG P + E
Sbjct: 61 QKNELVHSGRLQKGSIVKLSQFICNVVQNRKIIIIVDLDVIMDKCDLIGKPDP-APKEDP 119
Query: 117 AQKTI----------------------------------------------PSNNLPQPV 130
AQ + P+ N P V
Sbjct: 120 AQSAVSHAGNVQSAAGHLGSNAGNSQYLNSGSHTGGGVNVRPNVALPSMDRPTVNPPASV 179
Query: 131 RVNN------YSAPNSGTFNLQNSGTFNSQNPGSF---STPNSGTFRAP---NAGSIVRS 178
+N Y A N+ + + P S S + +FR P + + S
Sbjct: 180 VYSNGSGSARYGASNAPPPYPKPEPGVSLNRPASVNGSSGEQNTSFRNPLCETSRPVQNS 239
Query: 179 FQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNN 238
+ QP Q P N GP +N+AP RIIPI+ALNPYQ W IKARVTAKG+LR Y N
Sbjct: 240 YVRPPQPVNQQPSPMYNRGPTGRNDAPPRIIPISALNPYQNMWTIKARVTAKGELRTYTN 299
Query: 239 ARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLK 298
+RG GKVFSFDLLDSD GEIR TCFN V ++FY +IEVG+VYL+S+GSLKPAQKNFNHL
Sbjct: 300 SRGQGKVFSFDLLDSDRGEIRATCFNTVAEQFYNVIEVGKVYLVSRGSLKPAQKNFNHLP 359
Query: 299 NEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI 358
N+ EI L+ TS + C +D+SI +Q ++FR I +IE+ +NNSIVDVI +V S++P+ I
Sbjct: 360 NDQEITLDITSVIQPCV-DDNSILQQIYNFRPIGDIENMQNNSIVDVIAVVTSISPTASI 418
Query: 359 LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVND 418
+RKNG ETQ+R L LKD SGRSVELT+WG FCN EGQKLQ + D G FP+L VKS +VND
Sbjct: 419 IRKNGTETQKRSLQLKDMSGRSVELTVWGSFCNTEGQKLQNICDSGEFPILVVKSARVND 478
Query: 419 FSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVS 478
F+GKSIGTI ++QL + PDF EA LR WFD G+N + SISRE ++ G K+E+ KT+S
Sbjct: 479 FNGKSIGTIATSQLLVEPDFPEAFTLRGWFDQEGRNVPSQSISRESSSFG-KSEVQKTIS 537
Query: 479 QIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNR-WQCDR 537
QIK+E LG S+KPDW+++ A + F K D+F YTACP MIGDR+CNKKVT +G++ W C+R
Sbjct: 538 QIKDENLGTSDKPDWISICANVVFFKYDNFYYTACPNMIGDRKCNKKVTDNGDKTWHCER 597
Query: 538 CNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGE 597
C+ + CDYRYLLQ QIQD TG+TWVTAFQE GE+I+G PAK+L+ +K+E +D+ +F E
Sbjct: 598 CDTSL-SCDYRYLLQMQIQDHTGMTWVTAFQEGGEDIMGMPAKDLFSVKFEEKDEEKFKE 656
Query: 598 IIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQ-VNYSSESRYLLDLISK 649
II VF +Y+F+LK+KEE + DE RVK TV++A++ VN++SES+ LLDLI K
Sbjct: 657 IISKVVFTKYMFKLKVKEETFNDEARVKSTVVKAEKIVNFASESKSLLDLIDK 709
>gi|357459135|ref|XP_003599848.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
gi|355488896|gb|AES70099.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 813
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 292/465 (62%), Positives = 376/465 (80%), Gaps = 16/465 (3%)
Query: 198 PILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGE 257
P+++NE P IPIAAL+PY+G+WAIKARVT+KG LR YN+ G K FSFD+LDSDGGE
Sbjct: 120 PMVENEEP---IPIAALHPYKGKWAIKARVTSKGHLRHYNSPEGYLKAFSFDVLDSDGGE 176
Query: 258 IRVTCFNAVVDRFYEIIEVGRVYLISKGSLKP-AQKNFNHLKNEWEIFLEATSTVDLCTE 316
++VTC N V+D FYE+IEVG+VYLISK L P K+ HLK +WEI L + STV+LC +
Sbjct: 177 VQVTCLNDVIDSFYEVIEVGKVYLISKAGLIPVGSKDLKHLKIDWEIMLNSNSTVELCPD 236
Query: 317 EDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDT 376
ED SIP +FSFR IS+IE+ E+N+I+DVIG+V SVN SV + R+N +E ++RILNLKD
Sbjct: 237 EDGSIPMHKFSFRSISDIENIESNTILDVIGVVTSVNSSVLMSRENALEMRKRILNLKDN 296
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP 436
SGRSVELTLWG+ CN+EGQ+L+++VD G FPVL+VK+GKV +F GKSI IP ++LF+NP
Sbjct: 297 SGRSVELTLWGELCNREGQELKDIVDAGGFPVLAVKAGKVIEFRGKSINAIPISRLFVNP 356
Query: 437 DFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTV 496
DF EA LR WFD GK++A+ SIS++I+ GG KNE+ KTVSQIK+EGLG ++KPDW+T
Sbjct: 357 DFPEAQSLRLWFDQDGKDSASSSISKDISYGGPKNELRKTVSQIKDEGLGCTDKPDWITT 416
Query: 497 RAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSG------------NRWQCDRCNQEIDE 544
RA I+F+K+D FCYTACP+MIGDR+CNKKVT+SG RW+CD CNQE D
Sbjct: 417 RATISFMKTDVFCYTACPVMIGDRRCNKKVTRSGERCSKKVTKTVNTRWKCDTCNQEFDV 476
Query: 545 CDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVF 604
C+YRY+LQAQI D TGLT VTAF E+GE+I+G AK+LY+LKYE +DD RF +II+S +F
Sbjct: 477 CEYRYILQAQIVDHTGLTCVTAFNEAGEDIMGYSAKDLYVLKYEQEDDERFRDIIKSILF 536
Query: 605 NQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
NQ++FRLKI++EL G+EQ+VKI V++AD+VNYS+ES+Y+LDLISK
Sbjct: 537 NQFVFRLKIQKELCGEEQKVKIIVVKADKVNYSAESKYMLDLISK 581
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 81/119 (68%), Gaps = 4/119 (3%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLI----GSTQERYRFLISDSVSTQHAMLAT 56
M + LT N+I I GDV++KPLVQV+ I L+ S +Y +SD V + A +A
Sbjct: 1 MSIKLTENAIPAITSGDVDAKPLVQVISITLLVDSDDSLLRKYYLKLSDGVYSHSATIAA 60
Query: 57 QLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESEL 115
QLND V TG+VK+GS+V+L+DY+C T+ RKII+V METI+LD + IGNPK F + EL
Sbjct: 61 QLNDGVGTGRVKEGSIVKLLDYVCPTIVIRKIIIVHKMETIVLDSQIIGNPKSFVDPEL 119
>gi|2828288|emb|CAA16702.1| replication A protein-like [Arabidopsis thaliana]
gi|7268708|emb|CAB78915.1| replication A protein-like [Arabidopsis thaliana]
Length = 717
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 315/664 (47%), Positives = 437/664 (65%), Gaps = 78/664 (11%)
Query: 1 MPVNLTPNSISLINGGDVNSK----PLVQVMDIKLIGS----TQERYRFLISDSVSTQHA 52
M V+LT +I I G+V ++ P++QV D+K I + T+ER+R ++SD
Sbjct: 2 MEVSLTAGAIGKIMNGEVTTEADMIPVLQVTDLKQIMAQQDPTRERFRMVLSDGTYLHQG 61
Query: 53 MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSE 112
ML T LN+ VK G ++ GS+V+L ++ ++ R+I++V +E + + IG+P
Sbjct: 62 MLGTDLNNLVKEGTLQPGSIVRLTRFVGDVIKGRRIVIVPQLEVLKQISDIIGHP----- 116
Query: 113 SELTAQKTIPSNNLPQPVRVNNYSAPNSG----TFNLQNSGT--FNSQNPGSFSTPNSGT 166
+P + N+ +SG T Q SG N+ PG S
Sbjct: 117 --------VPGG------KHNDQRGADSGIKFNTTEQQGSGIRQVNNIEPG-----RSNA 157
Query: 167 FRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKAR 226
+P G AP +IIP+ AL+PY GRW IKAR
Sbjct: 158 AISPQVG------------------------------APPKIIPVNALSPYSGRWTIKAR 187
Query: 227 VTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS 286
VT K L++Y+N RG+GKVF+FDLLD+DGGEIRVTCFNAV D+FY+ I VG +YLIS+GS
Sbjct: 188 VTNKAALKQYSNPRGEGKVFNFDLLDADGGEIRVTCFNAVADQFYDQIVVGNLYLISRGS 247
Query: 287 LKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVI 346
L+PAQKNFNHL+N++EI L+ ST+ C EED +IP+ QF FR I +IES ENN IVDVI
Sbjct: 248 LRPAQKNFNHLRNDYEIMLDNASTIKQCYEEDAAIPRHQFHFRTIGDIESMENNCIVDVI 307
Query: 347 GIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFF 406
GIV S++P+V I RKNG T +R L LKD SGRSVE+T+WGDF Q + D G F
Sbjct: 308 GIVSSISPTVTITRKNGTATPKRSLQLKDMSGRSVEVTMWGDF--------QSLCDSGVF 359
Query: 407 PVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAA 466
PVL+VK+G++++F+GK++ TI S+QLFI+PDF EA +L+ WF+ GK+ +S+SRE +
Sbjct: 360 PVLAVKAGRISEFNGKTVSTIGSSQLFIDPDFVEAEKLKNWFEREGKSVPCISLSREF-S 418
Query: 467 GGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKV 526
G K ++ KT+SQIK+E LG SEKPDW+TV A I ++K D+FCYTACP+M GDR C+KKV
Sbjct: 419 GSGKVDVRKTISQIKDEKLGTSEKPDWITVSATILYLKFDNFCYTACPIMNGDRPCSKKV 478
Query: 527 TQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYML 585
T +G+ W+C++C++ +DECDYRY+LQ QIQD T LT VTAFQE+GEEI+G AK+LY +
Sbjct: 479 TDNGDGTWRCEKCDKSVDECDYRYILQLQIQDHTDLTCVTAFQEAGEEIMGISAKDLYYV 538
Query: 586 KYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLD 645
K E +D+ +F +IIR F +Y F+LK+KEE + DEQRVK TV++ D++NYS+++R +L
Sbjct: 539 KNEHKDEEKFEDIIRKVAFTKYNFKLKVKEETFSDEQRVKATVVKVDKLNYSADTRTMLG 598
Query: 646 LISK 649
+ K
Sbjct: 599 AMDK 602
>gi|357134970|ref|XP_003569087.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Brachypodium distachyon]
Length = 945
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 306/698 (43%), Positives = 443/698 (63%), Gaps = 79/698 (11%)
Query: 22 PLVQVMDIKLI---GSTQ---ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQL 75
P+VQV D+K++ G Q ERYR LISD V++Q +MLAT LN VK G ++ GS+V L
Sbjct: 26 PVVQVGDVKIVNTKGGPQQQSERYRMLISDGVNSQQSMLATPLNALVKDGTLRAGSIVHL 85
Query: 76 IDYICSTVQNRKIIVVLNMETIILDCEPIGNP-----KIFSESE-----LTAQKTIPSNN 125
++ +C+T+QNR+II+V ++ + +C IG P KI + + +A +T +
Sbjct: 86 VETMCNTIQNRRIIIVTKLDVLQTECPMIGTPKMCQMKILPQEQEPNLPASAAQTYSGSY 145
Query: 126 LPQPVRVNNYSAP-----------------------------------------NSGTFN 144
P + + AP + GT
Sbjct: 146 SGNPGMLGSSVAPMVEQAANSLSYGGPYKGIHGTVGSSIGRAVEPGPNNVLSGGSYGTVP 205
Query: 145 LQNSGTFNSQNPGS------------FSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPN 192
QN+ N P S F+ P +G P R QP+ Q QPPP
Sbjct: 206 AQNTMNANVVQPDSQLPLLSSHQNQRFAIPGAGRGFGPPGNIYGRPAQPSYQ---QPPPA 262
Query: 193 FRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLD 252
+RN GP+ KNEAP R+ PI+ALNPYQ W IKARVTAK + + NA G G VF+FDLLD
Sbjct: 263 YRNSGPVAKNEAPPRVTPISALNPYQTTWTIKARVTAKSRVTHFINASGPGTVFNFDLLD 322
Query: 253 SDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVD 312
+ GGEIR CF A VD+FY +IEV +VYLIS+G+++PAQK FN L N++++ L+ +++++
Sbjct: 323 AHGGEIRAKCFKAAVDQFYNLIEVDKVYLISRGAIRPAQKKFNPLNNDYDLTLDVSTSIE 382
Query: 313 LCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILN 372
+C+ +D SIP+QQF+FR ISEI + + S+VD++G+V SV+P+VP+++K+G ET++R L
Sbjct: 383 ICSGDDSSIPRQQFNFRQISEIANMDGGSMVDLLGVVTSVSPTVPLMKKDGNETKKRNLQ 442
Query: 373 LKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQL 432
LKD SG SVE+T WGDFC+ EGQ+LQ + D G P+L +KSG+VNDF+GKS+GTI S+ +
Sbjct: 443 LKDMSGCSVEITFWGDFCDAEGQQLQSLCDSGSSPMLVLKSGRVNDFNGKSVGTISSSLI 502
Query: 433 FINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPD 492
INPDF +A LR+W+ + GKNAA S+S +A G + ++ KT+++IK E LG+S+KP
Sbjct: 503 KINPDFPDAERLRQWYITEGKNAACSSLS--VATMG-RTDVRKTIAEIKGENLGQSDKPA 559
Query: 493 WVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLL 551
W+TV I I +D FCY AC + + RQCNKKVT +G+ W CD+C Q C+YRYLL
Sbjct: 560 WITVIGSIFHIANDPFCYPACTMQVNGRQCNKKVTNNGDGMWYCDKCEQSSPNCEYRYLL 619
Query: 552 QAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRL 611
Q+QD TG T+ AFQE+G++I+G A+EL+ +K+E QDDV+F EI++ +L +L
Sbjct: 620 NCQMQDHTGSTYCNAFQEAGKDIIGVTAQELFRIKHEEQDDVQFAEIMQRARHQLFLLKL 679
Query: 612 KIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
K+KEE+Y DE RVK T+ +A++++ + R+LL +I +
Sbjct: 680 KVKEEIYNDEARVKYTIFKAEKLD---DPRFLLGIIDR 714
>gi|226502879|ref|NP_001151792.1| DNA binding protein [Zea mays]
gi|195649707|gb|ACG44321.1| DNA binding protein [Zea mays]
gi|223945267|gb|ACN26717.1| unknown [Zea mays]
gi|413942327|gb|AFW74976.1| DNA binding protein [Zea mays]
Length = 876
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 299/722 (41%), Positives = 449/722 (62%), Gaps = 89/722 (12%)
Query: 1 MPVNLTPNSISLING---GDVNSKPLVQVMDIKLIGSTQ----ERYRFLISDSVSTQHAM 53
M LTP +++ ++ G+ +P++QV+D++++ + + ER+R ++SD T +M
Sbjct: 1 MEPQLTPGAVAAVSAHADGNGTLQPVLQVVDVRMVNNAKNPSAERFRMVLSDGEHTMQSM 60
Query: 54 LATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSES 113
LAT N RV+ G ++KGS+V L++ CST+Q+R+II+V+ ++ + +C IGNP+ +
Sbjct: 61 LATAENARVRDGSIQKGSIVHLLECTCSTIQSRRIIIVIKLDVLQSECAIIGNPRPY--- 117
Query: 114 ELTAQKTIPSNNLP------------------------QPVRVNNYSAPNSGTF------ 143
E+ Q N+P +P +V N + P SG++
Sbjct: 118 EMRNQPNEQGTNIPANAAQANTGTYSSGPGLLGSPAASRPAQVAN-NVPYSGSYGGYHGT 176
Query: 144 ---------------------------NLQNSG---------TFNSQNPGSFSTPNSGTF 167
N N+G + NS F+ P+
Sbjct: 177 VVPPIAPAVESVPNVASGVTYGTTSAHNTMNAGMTQSNLQQRSLNSHPNQRFAVPS---- 232
Query: 168 RAPNAGSIVRSFQPTVQPPYQ-PPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKAR 226
A +G+ ++ Q YQ PPP N P+ KN+A R++P+A LNPY +W IK R
Sbjct: 233 MAGGSGAPGNTYGQPAQSFYQQPPPGHMNRTPVSKNDA-YRLVPLAQLNPYLDKWTIKVR 291
Query: 227 VTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS 286
VTAK DLR YNNARG GKVFSFDLLD GEIR TCFN D+F+ +IEV +VYLISKGS
Sbjct: 292 VTAKTDLRFYNNARGAGKVFSFDLLDEQRGEIRATCFNTQADQFFNLIEVDKVYLISKGS 351
Query: 287 LKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVI 346
LKPAQK FN L +E+EI L++ +++++C ++D +IP+QQ++FR ISEIE+ E ++I+D+I
Sbjct: 352 LKPAQKKFNSLNHEYEISLDSRTSIEVCADDDSNIPRQQYNFRKISEIENIEKDAILDLI 411
Query: 347 GIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFF 406
GIV SV PSV +RK+G+ETQRR L LKD SGRSV+LTLWG C EG +LQ + D G
Sbjct: 412 GIVTSVGPSVTFIRKDGVETQRRTLELKDMSGRSVQLTLWGKLCVAEGNQLQSLCDSGLN 471
Query: 407 PVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAA 466
PVL++K +V D+SG+S+ + STQL I+P+ EA LR W+ +GGK AA VS+S ++
Sbjct: 472 PVLALKGARVTDYSGRSVSSAGSTQLKIDPEIPEAESLRRWYATGGKTAACVSLS-VVSM 530
Query: 467 GGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKV 526
GG + K+++QIK+E LG+ EKPD++TV+A I+ + +D+FCY AC + + R CNKKV
Sbjct: 531 GGTC--VRKSIAQIKDENLGQLEKPDFITVKAAISHLIADNFCYPACTIDVNGRMCNKKV 588
Query: 527 TQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYML 585
T +G+ W+CD+C+Q + C+YRY+L QIQD +G+T TAF+++ + ++G EL +
Sbjct: 589 TDNGDGTWRCDKCDQSLPNCEYRYVLNGQIQDHSGVTNFTAFEDAAKVMIGHSGHELNNI 648
Query: 586 KYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLD 645
E D RF EI+++ + Q+LF LK+KEE+Y D +VK + +A++++ + ES YLL
Sbjct: 649 SVE--DSERFAEILQAARWQQFLFTLKVKEEIYNDAPQVKCNITKAEKLDPAIESSYLLG 706
Query: 646 LI 647
+I
Sbjct: 707 VI 708
>gi|190688746|gb|ACE86409.1| replication protein A1-like protein [Sorghum bicolor]
Length = 993
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 300/711 (42%), Positives = 441/711 (62%), Gaps = 65/711 (9%)
Query: 1 MPVNLTPNSISLIN---GGDVNSKPLVQVMDIKLIGSTQ----ERYRFLISDSVSTQHAM 53
M V LTP ++ I+ G+ +P++QV+D++++ + + ER++ ++SD V T M
Sbjct: 221 MAVQLTPGAVMAISKHADGNGTLQPMLQVVDLQMVNNVKNPSAERFQMVLSDGVYTMQCM 280
Query: 54 LATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIF--- 110
L N V G ++KGS++ L ++ CST+QNR+II+V + + +C +GNPK +
Sbjct: 281 LTAAENTHVLDGSIQKGSIIHLQEFTCSTIQNRRIIIVFKLYVLQSECNIMGNPKPYEMR 340
Query: 111 ------------------SESELTAQKTIPSNNLPQPVR-VNNYSAPNSGTFNLQNS--- 148
+ + + + S+ P+PV+ VNN P SG++
Sbjct: 341 NQPNEQVTNFPANAAQANTGTYSSGPGMLGSSAAPRPVQDVNN--VPYSGSYGGYQGMMG 398
Query: 149 ---GTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPP------------------- 186
G P S + GT A N V Q +Q P
Sbjct: 399 RPFGHAVESVPNVASGLSYGTTSAHNNTMNVGIVQSNLQQPSLNSHQNPRFVVPSMTGGS 458
Query: 187 ---YQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDG 243
Q PP P+ KN+A ++P+A LNPYQ RW I ARVTAK DLR Y+N+RG G
Sbjct: 459 SFYQQSPPGHMKRTPVSKNDA-NHLVPVAQLNPYQTRWKIMARVTAKTDLRHYSNSRGPG 517
Query: 244 KVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI 303
KVFSFDLLD GGEIR TCFN D+F+++IEV +VYLISKG LKPA K FN L +E+E+
Sbjct: 518 KVFSFDLLDGQGGEIRATCFNVQADQFFDLIEVDKVYLISKGLLKPAMKKFNSLNHEYEV 577
Query: 304 FLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNG 363
L+ +++++C ++D +IP+QQ++FR ISEIE+ E +IVD+IGIV SV PS ++RK+G
Sbjct: 578 TLDHRTSIEVCVDDDSNIPRQQYNFRQISEIENIEAGAIVDLIGIVTSVGPSSIVMRKDG 637
Query: 364 METQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS 423
+TQ+R L LKD S RS+E+ LWG FC+ EG++LQ + D G P+LS+K G+V DFSG+S
Sbjct: 638 TQTQKRTLQLKDMSFRSLEIILWGKFCDAEGRQLQLLCDSGSNPILSLKGGRVCDFSGRS 697
Query: 424 IGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNE 483
+ TI STQL +NPDF A L++W+ GKN A +S+S I + +++ + KT++QIK+E
Sbjct: 698 VVTISSTQLKVNPDFQVAERLKQWYIIEGKNTAFISLSWGI-SNMSRSHVLKTIAQIKDE 756
Query: 484 GLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEI 542
LGRS+KPD++TV+ I+ +K+D+FCY AC + + R CNKKV +G+ WQCD+CN+ +
Sbjct: 757 NLGRSDKPDFITVKGAISHLKTDNFCYPACTMEVNGRLCNKKVMNNGDGTWQCDKCNKSL 816
Query: 543 DECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSR 602
+YRYLL QIQD TG+T+ TAFQ +GE I G A+EL+M++ QDD+RF EI+++
Sbjct: 817 PNFEYRYLLLCQIQDHTGVTYATAFQAAGEAIFGHTAQELFMIQNVEQDDMRFTEIMQAV 876
Query: 603 VFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSFRK 653
+ +YLF+LKI EE Y EQRV ++I +++ E+ LL +S+ K
Sbjct: 877 LRREYLFKLKIYEETYNGEQRVICSIIGVEKL---EETNNLLKDVSRPILK 924
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 17 DVNSKPLVQVMDIKLIGSTQERYRFLISDSVS-TQHAMLATQLNDRVKTGQVKKGSVVQL 75
D +P++Q+ D + + +YR +SD Q +LA LN V G ++ G+V+++
Sbjct: 26 DHGLRPVLQLADEPRMAAETGQYRVALSDGGERLQPGILAASLNHLVARGALRCGTVIRV 85
Query: 76 IDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIF 110
++Y N+K+++V+ +E + +C I NP IF
Sbjct: 86 LEYFAGFYHNQKVVIVIQLEILHAECTLIRNPTIF 120
>gi|296088465|emb|CBI37456.3| unnamed protein product [Vitis vinifera]
Length = 754
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 261/425 (61%), Positives = 328/425 (77%), Gaps = 43/425 (10%)
Query: 226 RVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKG 285
+ TAKG+LR YNN RGDGKVFSFDLLDSDGGEIRVTCFNAV D+FY IE G+VYLISKG
Sbjct: 150 QFTAKGELRHYNNPRGDGKVFSFDLLDSDGGEIRVTCFNAVADQFYNQIETGKVYLISKG 209
Query: 286 SLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDV 345
SLKPAQK FNHL+N+ EIFLE+TST+ C ++D+SIP+QQF FR IS++ES ENNS+VDV
Sbjct: 210 SLKPAQKTFNHLRNDHEIFLESTSTIQPCFDDDNSIPRQQFHFRSISDVESMENNSVVDV 269
Query: 346 IGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGF 405
IG+V ++PS I+RKNG ETQ+R L+LKD SGRSVELTLWG+FCN EGQ+LQ M
Sbjct: 270 IGVVSFISPSASIMRKNGTETQKRALHLKDMSGRSVELTLWGNFCNAEGQRLQNM----- 324
Query: 406 FPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIA 465
+GTI ++QLFI PDF EA +L+EWFD G+N +VSISRE+
Sbjct: 325 ------------------LGTISTSQLFIEPDFPEARKLKEWFDKEGRNTPSVSISREVT 366
Query: 466 AGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKK 525
+ G + ++ KT+SQIK+E LG SEKPDW+TV A ++FIK D+FCYTACP+MIGDRQCNKK
Sbjct: 367 SMG-RTDVRKTISQIKDERLGTSEKPDWITVCATVSFIKVDNFCYTACPIMIGDRQCNKK 425
Query: 526 VTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYM 584
VT +G+ +W+C+RC+Q +D+CDYRY+LQ QIQD TGLTWVTAFQE C
Sbjct: 426 VTNNGDGKWRCERCDQSVDDCDYRYILQFQIQDHTGLTWVTAFQE-------CE------ 472
Query: 585 LKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
QDD +FGEI+R +F +Y F+LK+KEE++ DEQRVK TV++A++VN+SSESR+LL
Sbjct: 473 -----QDDEKFGEILRGVLFTKYSFKLKVKEEIFSDEQRVKSTVVKAEKVNFSSESRFLL 527
Query: 645 DLISK 649
D++ K
Sbjct: 528 DMVEK 532
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 81/118 (68%), Gaps = 8/118 (6%)
Query: 1 MPVNLTPNSISLINGGDVNS---KPLVQVMDIKLIGSTQ-----ERYRFLISDSVSTQHA 52
M VNLT +IS++ GD KP++QV DI+L+ + Q ER+R L+SD Q
Sbjct: 1 MGVNLTEGAISMLCSGDAQGSDVKPVLQVADIRLVNTQQQSNSNERFRILLSDGCHLQQG 60
Query: 53 MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIF 110
MLATQ N+ VK+G+++KGSVVQL ++C+ +++R II++++++ I+ C+PIG PK +
Sbjct: 61 MLATQRNELVKSGRLQKGSVVQLTQFVCNVIKDRMIIIIIDLDVILEKCDPIGEPKQY 118
>gi|326533496|dbj|BAK05279.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1027
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 253/500 (50%), Positives = 358/500 (71%), Gaps = 6/500 (1%)
Query: 150 TFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARII 209
+ NS F+ P +G +P R QP+ Q QPP + N+GP+ KN A R +
Sbjct: 273 SLNSHQNQRFAAPGTGGGISPPGNVYGRPAQPSYQ---QPPQAYANNGPVAKNGAALRTV 329
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
PI+ALNPYQ W IKARVTAK ++ Y NA+G GK+F+FDL D+ GGEIR CFN +D+
Sbjct: 330 PISALNPYQRTWTIKARVTAKSQVKHYKNAKGPGKLFNFDLRDAHGGEIRAVCFNTQLDQ 389
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFR 329
FY++IEV +VYLIS+GSLKPA K +NHL N++E+ L++++T+++C+++D SIP+QQF FR
Sbjct: 390 FYDLIEVDKVYLISRGSLKPANKQYNHLNNDYEVSLDSSTTIEVCSDDDSSIPRQQFDFR 449
Query: 330 HISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDF 389
ISEI + + +++VD++G+V SV+PS P RK+G ETQ+R+L LKD SG SVE+T WG F
Sbjct: 450 QISEIANMDKDTMVDLLGVVTSVSPSSPFTRKDGAETQKRVLQLKDMSGFSVEITFWGGF 509
Query: 390 CNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFD 449
CN EGQ+LQ + D G PVL+++S +V DF GK++ TI S+ L INPDF +A LR+W+
Sbjct: 510 CNAEGQQLQSLCDSGLNPVLALRSVRVGDFKGKNVSTIGSSFLKINPDFPDAESLRQWYI 569
Query: 450 SGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFC 509
+ GKNAA +S+S E +G + + KT+ QIK E LGRSEKPDW+TV+ I+ I +D+FC
Sbjct: 570 TEGKNAAFISLSME-GSGMGRTDDRKTIEQIKAENLGRSEKPDWITVKGTISHISTDNFC 628
Query: 510 YTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQ 568
Y AC + +CNKKVT +G+ WQCD+C Q C+YRY+LQ QIQD TG ++ TAF
Sbjct: 629 YPACTTEVNGTRCNKKVTNNGDGMWQCDKCEQSTPNCEYRYMLQCQIQDYTGTSYATAFH 688
Query: 569 ESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITV 628
++G++I+G PA++LY +K+E QDD +F +II+ F +LF+LK+KEE++ DE RVK +
Sbjct: 689 DAGKDIIGLPAQDLYRIKHEEQDDEKFADIIQKVRFELFLFKLKVKEEVFNDEPRVKCYI 748
Query: 629 IRADQV-NYSSESRYLLDLI 647
A ++ + S ESR+LL I
Sbjct: 749 ANAQKLEDTSKESRFLLGPI 768
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 102/203 (50%), Gaps = 31/203 (15%)
Query: 16 GDVNSKPLVQVMDIKLI------GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKK 69
G N +P++QV D++ + G ERYR L+SD V +Q +MLAT N V TG ++
Sbjct: 21 GPGNIQPVLQVADLRTVTTKNHVGHLSERYRMLLSDGVHSQQSMLATTHNHLVNTGALRI 80
Query: 70 GSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQK-TIP-----S 123
GSVV L D C+T+QNR+II+V+ +E + +C+ IG PKI+ +S Q +P +
Sbjct: 81 GSVVHLHDITCNTIQNRRIIIVVELEVLQSECDLIGKPKIYEKSLSAGQAPNLPASAAQA 140
Query: 124 NN--------------LPQPVRVNN---YSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGT 166
NN +P+ ++ N Y P SG + N + PG + P G+
Sbjct: 141 NNRNYSNGPGMLGNGVVPKVEQITNNQSYGGPYSGVHSPANPSICQTVQPGPNNVPAGGS 200
Query: 167 FRAPNAGSIVRS--FQPTVQPPY 187
+ +A + + Q Q PY
Sbjct: 201 YGTMSAHNTMNGNMVQQNSQRPY 223
>gi|356507210|ref|XP_003522362.1| PREDICTED: LOW QUALITY PROTEIN: replication protein A 70 kDa
DNA-binding subunit-like [Glycine max]
Length = 586
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 280/562 (49%), Positives = 357/562 (63%), Gaps = 64/562 (11%)
Query: 84 QNRKIIVVLNMETIILDCEPIG-----------------------NPKIFSESELT---- 116
+N +II++++++ ++ CE IG NP++ + S T
Sbjct: 32 RNLRIIIIVDLDVVLDKCELIGEPVPAPKDAPTESATGQSGVTYGNPQLLNSSSHTGGMP 91
Query: 117 ------------------AQKTIPSNNLPQPVRVNN---YSAPNSGTFNLQNSGTFNSQN 155
A SN LP +V + SAP SG+ QN+G N Q
Sbjct: 92 ARPNIASPSPDHPKANPYASSVYSSNALPTYPKVEHEISRSAPFSGSSGGQNTGFHNPQF 151
Query: 156 PGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPY-QPPPNFRNHGPILKNEAPARIIPIAAL 214
S S NS +P QP Y P P + N P+ +NEA RIIPIA L
Sbjct: 152 EASRSLQNSYA-------------RPPQQPMYRHPSPMYTNKAPMGRNEAAPRIIPIATL 198
Query: 215 NPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEII 274
NPYQ W IKARVT K +LR Y NARGD KVFSFDLLDSDGGEIR TCFN V D+FY +I
Sbjct: 199 NPYQSMWTIKARVTFKAELRHYTNARGDRKVFSFDLLDSDGGEIRATCFNVVADQFYNVI 258
Query: 275 EVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEI 334
E G+VYLI +GS+KP QKNFNHL N+ E+ L+ S + C +++DSI Q F++R ISEI
Sbjct: 259 EAGKVYLIFRGSIKPTQKNFNHLPNDQELTLDVASIIQPCLDDNDSITSQTFNYRPISEI 318
Query: 335 ESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEG 394
ES ENN+IVDVIG+V S++P I+RKNG E Q+R L LKD SGRSVELTL G+FC EG
Sbjct: 319 ESLENNNIVDVIGVVTSISPKTSIMRKNGTEVQKRTLQLKDMSGRSVELTLRGNFCIVEG 378
Query: 395 QKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKN 454
Q LQ + DVG FPVL+ K+ +VNDF+GKS+GTI ++QL++ DF EA L+ WF++ GK+
Sbjct: 379 QMLQSICDVGEFPVLATKAIRVNDFNGKSVGTIATSQLYVEADFPEACILKIWFENEGKS 438
Query: 455 AATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACP 514
T+SISRE++ G K ++ KT+SQIK+E LG SEKP+W++V A IK D+F Y CP
Sbjct: 439 VPTLSISREMSNLG-KTDVRKTISQIKDEKLGTSEKPNWISVFAAFXHIKVDNFYYPGCP 497
Query: 515 LMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEE 573
L I DRQCNK VT + + W C+ C Q ID CD+RYLL QIQD T +TWVT FQ+SGEE
Sbjct: 498 LKIRDRQCNKNVTNNADGTWHCEICIQSIDACDFRYLLSMQIQDHTSITWVTVFQKSGEE 557
Query: 574 ILGCPAKELYMLKYELQDDVRF 595
I+G PAK LY +KYE QDD +F
Sbjct: 558 IMGIPAKYLYYMKYEEQDDDKF 579
>gi|115461691|ref|NP_001054445.1| Os05g0111000 [Oryza sativa Japonica Group]
gi|52353639|gb|AAU44205.1| unknown protein [Oryza sativa Japonica Group]
gi|113577996|dbj|BAF16359.1| Os05g0111000 [Oryza sativa Japonica Group]
gi|222629944|gb|EEE62076.1| hypothetical protein OsJ_16860 [Oryza sativa Japonica Group]
Length = 951
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 262/538 (48%), Positives = 366/538 (68%), Gaps = 14/538 (2%)
Query: 116 TAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGS---FSTPNSGTFRAPNA 172
T+Q I + N QP N N+ +Q + +S NP F+ P SG P
Sbjct: 219 TSQLNIMNANTMQPTSQLNTMNANT----MQPTSQLSSLNPNQNQRFAAPASGGVFGPPG 274
Query: 173 GSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGD 232
+ + +P+ Q QPPP + N GP +N++ RIIPI ALNPYQ +W IKARVTAK D
Sbjct: 275 NAYGQPSRPSYQ---QPPPVYMNRGPASRNDSATRIIPITALNPYQPKWTIKARVTAKSD 331
Query: 233 LRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQK 292
+R ++NAR G VFSFDLLD+ GGEIR C+ D+F+ IEVGRVYLIS+GSLKPAQK
Sbjct: 332 IRHWSNARSSGTVFSFDLLDAQGGEIRAQCWKESADKFFGQIEVGRVYLISRGSLKPAQK 391
Query: 293 NFNHLKNEWEIFLE-ATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVIS 351
+N L +++EI L+ STV++C+++D+SIP+ Q++FR ISE+E+ N +IVD++G+V S
Sbjct: 392 KYNTLNHDYEITLDIGLSTVEVCSDDDNSIPRLQYNFRQISELENMANETIVDLLGVVTS 451
Query: 352 VNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSV 411
V+PS I+RK G ET++R + LKD SGRS+E+TLWG+FC+ EGQ+LQ D G P+++
Sbjct: 452 VSPSATIMRKIGTETRKRSIQLKDLSGRSIEVTLWGNFCDAEGQQLQLQCDSGSNPIIAF 511
Query: 412 KSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKN 471
K +V DF+GKS+ TI STQL INPDF E LR+W+ + GK A +S+SRE+ G +
Sbjct: 512 KGARVGDFNGKSVSTIGSTQLIINPDFPEVERLRQWYMTEGKTAPCISLSREMLNMG-RT 570
Query: 472 EIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACP-LMIGDRQCNKKVTQSG 530
+ KT++QIK+E LGR EKPDW+TV+A I+ + ++SFCY ACP L+ RQCNKK +G
Sbjct: 571 DARKTIAQIKDENLGRLEKPDWITVKAAISHVTTESFCYPACPKLLPVGRQCNKKAINNG 630
Query: 531 N-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYEL 589
+ W CDRC++ +YRY+L+ QIQD TG T+ +AF E+GE+I G A EL+ ++
Sbjct: 631 DGMWHCDRCDESFQNPEYRYMLRFQIQDHTGSTYASAFDEAGEQIFGRKAGELFSIRNVD 690
Query: 590 QDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
QDD +F EII ++ YLF+LK+KEE Y DEQ +K T ++ ++++ S ES LL I
Sbjct: 691 QDDAQFAEIIEGVRWHLYLFKLKVKEETYNDEQSLKCTAVKVEKLDPSKESNVLLGAI 748
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 79/130 (60%), Gaps = 11/130 (8%)
Query: 1 MPVNLTPNSISLIN---GGDVNSKPLVQVMDIKLIGSTQ--------ERYRFLISDSVST 49
M LTP ++ I G +P++QV+D++ + + ER+R ++SD V+T
Sbjct: 1 MEPQLTPGAVQAIAEHPDGTGTIQPVLQVVDVRPVTTKNAPPTPKPAERFRMMLSDGVNT 60
Query: 50 QHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKI 109
Q +MLAT LN VK ++ G+VVQL D++C+T+Q ++II+V+ ++ + DC IGNPK
Sbjct: 61 QQSMLATALNPLVKDATLRPGTVVQLTDFMCNTIQGKRIIIVVKLDVLQNDCIVIGNPKH 120
Query: 110 FSESELTAQK 119
+ LT ++
Sbjct: 121 YEPKSLTKEQ 130
>gi|242086615|ref|XP_002439140.1| hypothetical protein SORBIDRAFT_09g001260 [Sorghum bicolor]
gi|190688743|gb|ACE86406.1| replication protein A1-like protein [Sorghum bicolor]
gi|241944425|gb|EES17570.1| hypothetical protein SORBIDRAFT_09g001260 [Sorghum bicolor]
Length = 933
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/462 (53%), Positives = 337/462 (72%), Gaps = 8/462 (1%)
Query: 188 QPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFS 247
QPPP N P+ KN+A +R++P+A LNPYQ W IKARVTAK DLR YNN G GKVFS
Sbjct: 292 QPPPGHMNRNPVSKNDA-SRLVPVAHLNPYQNTWTIKARVTAKTDLRHYNNKNGAGKVFS 350
Query: 248 FDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEA 307
FD+LD GGEIRVTCFNA D+F+++IEV +VYLISKGS+K AQK FN L +E+EI L+
Sbjct: 351 FDILDGQGGEIRVTCFNAQADQFFDLIEVDKVYLISKGSVKAAQKKFNSLNHEYEIALDF 410
Query: 308 TSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK-NGMET 366
S++++C ++D +IP+ ++FR ISEIE+ E +IVD+IGIV SV PS I+RK + E
Sbjct: 411 RSSIEVCVDDDSNIPRPHYNFRQISEIENLEAGTIVDLIGIVTSVGPSGTIIRKLDNSEV 470
Query: 367 QRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGT 426
Q+R L LKD SGRS+ELTLWG FC+ EGQ+LQ D G PVL++K +V +FSGKS+ T
Sbjct: 471 QKRNLQLKDMSGRSIELTLWGKFCDAEGQQLQLQCDSGLNPVLALKGARVTEFSGKSVNT 530
Query: 427 IPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLG 486
ST + ++PDF EA LR W+ + GK AA VS+S + + G + ++ K V+QIK+E LG
Sbjct: 531 TGSTHVKVDPDFPEAESLRRWYATEGKTAACVSLS--VVSMG-RTDVRKAVAQIKDEDLG 587
Query: 487 RSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDEC 545
RSEKPD++TV+ I+ + +D+FCY AC L + + CNKKV +G+ WQCD+C++ + C
Sbjct: 588 RSEKPDFITVKGAISHLTTDNFCYPACTLEVNGKVCNKKVINNGDGTWQCDKCDKSLPNC 647
Query: 546 DYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFN 605
+YRYLLQ Q+QD TG+T+ TAFQE+G EI+G A ELY ++ E D RF EI++ +
Sbjct: 648 EYRYLLQCQVQDHTGVTYATAFQEAGIEIVGHSAYELYNIREE--DPERFAEILQGVRWQ 705
Query: 606 QYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
Q+LF+LK+ EE Y DE RVK ++RA++++ + ES YLL +I
Sbjct: 706 QFLFKLKVYEETYNDEHRVKCNILRAEKLDPAKESSYLLGVI 747
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
Query: 1 MPVNLTPNSISLIN---GGDVNSKPLVQVMDIKLI-----GSTQERYRFLISDSVSTQHA 52
M LT +++ ++ G+ +P++QV+D++++ + QER+R L+SD T +
Sbjct: 1 MAAQLTTGAVAAVSEHADGNGTLQPVLQVVDVRIVPNVKSATNQERFRMLLSDGTHTMQS 60
Query: 53 MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIF 110
ML+T N R++ G +KKGS+V L ++ CST+Q+R+II+++ ++ + +C IG+PK +
Sbjct: 61 MLSTSENARIRDGIIKKGSIVHLHEFTCSTIQHRRIIIIIKLDVLQTECAIIGDPKPY 118
>gi|242061678|ref|XP_002452128.1| hypothetical protein SORBIDRAFT_04g020190 [Sorghum bicolor]
gi|241931959|gb|EES05104.1| hypothetical protein SORBIDRAFT_04g020190 [Sorghum bicolor]
Length = 831
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 280/721 (38%), Positives = 431/721 (59%), Gaps = 82/721 (11%)
Query: 5 LTPNSISLINGGDVNS--KPLVQVMDIKLIGSTQ---------------ERYRFLISDSV 47
LTP ++ I G V + +P++QV++++ + +T+ ERYR ++SD V
Sbjct: 8 LTPGAVQAIANGAVCAALQPVLQVLEVRRVATTKSGDASASANPTPSERERYRLILSDGV 67
Query: 48 STQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNP 107
A+LAT N V+ G ++KG++V L ++IC T+++++II+++ +E + C IGNP
Sbjct: 68 DAHQAILATAFNPFVRDGTLRKGTIVHLNEFICDTIRDKRIIIIVKIEILQTACALIGNP 127
Query: 108 KIF--------------------------SESELTAQKTIPSNNLP-------------- 127
K + ES + + SNNL
Sbjct: 128 KNYMAQIQGKVQDPNLSAIAAQNSGAPGMPESSVALRADQASNNLSYGGPFIDAQGMVGF 187
Query: 128 ------QPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQP 181
+ N ++ + GT + QN+ N P F P+ N G V
Sbjct: 188 SIGRTVERDHSNVFTGGSYGTLSAQNTVNANMVEP-RFQQPS--LISHQNQGFAVTGTGE 244
Query: 182 TVQPP-----------YQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAK 230
+ PP Q P + N P+ +E + ++ I++L YQ RW IKARVTAK
Sbjct: 245 ALTPPGNAHRRHEHSYQQLPSGYINRAPV-ASEPASHVVAISSLKVYQTRWTIKARVTAK 303
Query: 231 GDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPA 290
++ +NNA+G GK+FSFDL+D +GG+IR CF VD+FY++IEV +VYLIS G++KP+
Sbjct: 304 TGVKHWNNAKGTGKLFSFDLIDGEGGQIRAVCFKEAVDKFYDLIEVDKVYLISSGAVKPS 363
Query: 291 QKNFNHLKNEWEIFLEA-TSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIV 349
QK FN L N+ EI L+ TS+V++C+ +D +IPK Q+SF+ ISEIE+ +N+S VD++G+V
Sbjct: 364 QKRFNPLNNDLEITLDTLTSSVEICSSDDFNIPKVQYSFQQISEIENMDNHSAVDLLGVV 423
Query: 350 ISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVL 409
SV PSV + RK+G +TQ+R L L+D SGRSV +T WGDFC+ EGQ+LQ F P+L
Sbjct: 424 TSVGPSVMMTRKDGTQTQKRTLQLRDMSGRSVGVTFWGDFCDVEGQQLQLQCHSSFNPIL 483
Query: 410 SVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGA 469
++ +++DFSG+S+ TI STQL INPDF +A LR+W+ + G A +S+SRE
Sbjct: 484 ALIGARISDFSGRSVSTIGSTQLKINPDFPDAERLRQWYVTEGMTTACLSLSRE-QFNSV 542
Query: 470 KNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQS 529
+ ++ KT++QIK+E LGR+ K DW+TV+A I+ ++++SFCY ACPL+ ++ CNKKV S
Sbjct: 543 QADVRKTIAQIKDETLGRN-KTDWITVKAAISHVQTESFCYPACPLIFNEKPCNKKVIDS 601
Query: 530 GNR-WQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYE 588
G+ W C+RC++ C+YRY+++ +IQD T TAFQE+G++I G A+EL ++
Sbjct: 602 GDGIWFCERCDKSSGSCEYRYMVKFRIQDHTSTIIATAFQEAGKQIFGRTAQELRTIRNV 661
Query: 589 LQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLIS 648
D+ F EII ++ LF+LK++EE Y DEQR+ T+I A++++ S ES L + I
Sbjct: 662 NHDEALFTEIIEGARWHLNLFKLKVREESYNDEQRIGCTIINAEKLDPSKESNVLFEAID 721
Query: 649 K 649
+
Sbjct: 722 R 722
>gi|218195961|gb|EEC78388.1| hypothetical protein OsI_18166 [Oryza sativa Indica Group]
Length = 988
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 285/714 (39%), Positives = 413/714 (57%), Gaps = 117/714 (16%)
Query: 1 MPVNLTPNSISLIN---GGDVNSKPLVQVMDIKLIGSTQ--------ERYRFLISDSVST 49
M LTP ++ I G +P++QV+D++ + + ER+R ++SD V+T
Sbjct: 122 MEPQLTPGAVQAIAEHPDGTGTIQPVLQVVDVRPVTTKNAPPTPKPAERFRMMLSDGVNT 181
Query: 50 QHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKI 109
Q +MLAT LN VK ++ G+VVQL D++C+T+Q ++II+V+ ++ + DC IGNPK
Sbjct: 182 QQSMLATALNPLVKDATLRPGTVVQLTDFMCNTIQGKRIIIVVKLDVLQNDCIVIGNPKH 241
Query: 110 FSESELTA------QKTIPSNN------------------LPQPVRVNNYSAPNSGTFNL 145
+ LT Q ++ N Q ++Y P + +
Sbjct: 242 YEPKSLTKEQDPNLQASVAQTNNGTYSGGASMLGPSVAPRAEQAASNSSYGGPYNSAQGM 301
Query: 146 QNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRS--FQP----------TVQP-------- 185
S + PG + G++ A +A + + QP T+QP
Sbjct: 302 LGSSIGRTVEPGPANVSAVGSYGAISAQNTTNANMMQPTSQLNIMNANTMQPTSQLNTMN 361
Query: 186 --PYQPP-------PNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRY 236
QP PN GP +N++ RIIPI ALNPYQ +W IKARVTAK D+R +
Sbjct: 362 ANTMQPTSQLSSLNPNQNQRGPASRNDSATRIIPITALNPYQPKWTIKARVTAKSDIRHW 421
Query: 237 NNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNH 296
+NAR G VFSFDLLD+ GGEIR C+ D+F+ IEVGRVYLIS+GSLKPAQK +N
Sbjct: 422 SNARSSGTVFSFDLLDAQGGEIRAQCWKESADKFFGQIEVGRVYLISRGSLKPAQKKYNT 481
Query: 297 LKNEWEIFLE-ATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPS 355
L +++EI L+ STV++C+++D+SIP+ Q++FR ISE+E+ N +IVD++G+V SV+PS
Sbjct: 482 LNHDYEITLDIGLSTVEVCSDDDNSIPRLQYNFRQISELENMANETIVDLLGVVTSVSPS 541
Query: 356 VPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGK 415
I+RK G ET++R + LKD SGRS+E+TLWG+FC+ EG +
Sbjct: 542 ATIMRKIGTETRKRSIQLKDLSGRSIEVTLWGNFCDAEG-------------------AR 582
Query: 416 VNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHK 475
V DF+GKS+ T STQL INPDF E LR+W+ + GK A +S+SRE+ G + + K
Sbjct: 583 VADFNGKSVSTSGSTQLIINPDFPEVERLRQWYMTEGKTAPCISLSREMLNMG-RTDARK 641
Query: 476 TVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACP-LMIGDRQCNKKVTQSGN-RW 533
T++QIK+E LGR EKPDW+TV+A I+ + ++SFCY ACP L+ RQCNKK +G+ W
Sbjct: 642 TIAQIKDENLGRLEKPDWITVKAAISHVTTESFCYPACPKLLPVGRQCNKKAINNGDGMW 701
Query: 534 QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDV 593
CDRC++ +YRY+L+ QIQD TG T+ +AF E+G +++ L
Sbjct: 702 HCDRCDESFQNPEYRYMLRFQIQDHTGSTYASAFDEAG-------------VRWHL---- 744
Query: 594 RFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
YLF+LK+KEE Y DEQ +K T ++ ++++ S ES LL I
Sbjct: 745 -------------YLFKLKVKEETYNDEQSLKCTAVKVEKLDPSKESNVLLGAI 785
>gi|242086613|ref|XP_002439139.1| hypothetical protein SORBIDRAFT_09g001250 [Sorghum bicolor]
gi|241944424|gb|EES17569.1| hypothetical protein SORBIDRAFT_09g001250 [Sorghum bicolor]
Length = 663
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 239/467 (51%), Positives = 337/467 (72%), Gaps = 6/467 (1%)
Query: 188 QPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFS 247
Q PP P+ KN+A ++P+A LNPYQ RW I ARVTAK DLR Y+N+RG GKVFS
Sbjct: 133 QSPPGHMKRTPVSKNDA-NHLVPVAQLNPYQTRWKIMARVTAKTDLRHYSNSRGPGKVFS 191
Query: 248 FDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEA 307
FDLLD GGEIR TCFN D+F+++IEV +VYLISKG LKPA K FN L +E+E+ L+
Sbjct: 192 FDLLDGQGGEIRATCFNVQADQFFDLIEVDKVYLISKGLLKPAMKKFNSLNHEYEVTLDH 251
Query: 308 TSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQ 367
+++++C ++D +IP+QQ++FR ISEIE+ E +IVD+IGIV SV PS ++RK+G +TQ
Sbjct: 252 RTSIEVCVDDDSNIPRQQYNFRQISEIENIEAGAIVDLIGIVTSVGPSSIVMRKDGTQTQ 311
Query: 368 RRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTI 427
+R L LKD S RS+E+ LWG FC+ EG++LQ + D G P+LS+K G+V DFSG+S+ TI
Sbjct: 312 KRTLQLKDMSFRSLEIILWGKFCDAEGRQLQLLCDSGSNPILSLKGGRVCDFSGRSVVTI 371
Query: 428 PSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGR 487
STQL +NPDF A L++W+ GKN A +S+S I + +++ + KT++QIK+E LGR
Sbjct: 372 SSTQLKVNPDFQVAERLKQWYIIEGKNTAFISLSWGI-SNMSRSHVLKTIAQIKDENLGR 430
Query: 488 SEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECD 546
S+KPD++TV+ I+ +K+D+FCY AC + + R CNKKV +G+ WQCD+CN+ + +
Sbjct: 431 SDKPDFITVKGAISHLKTDNFCYPACTMEVNGRLCNKKVMNNGDGTWQCDKCNKSLPNFE 490
Query: 547 YRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQ 606
YRYLL QIQD TG+T+ TAFQ +GE I G A+EL+M++ QDD+RF EI+++ + +
Sbjct: 491 YRYLLLCQIQDHTGVTYATAFQAAGEAIFGHTAQELFMIQNVEQDDMRFTEIMQAVLRRE 550
Query: 607 YLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSFRK 653
YLF+LKI EE Y EQRV ++I +++ E+ LL +S+ K
Sbjct: 551 YLFKLKIYEETYNGEQRVICSIIGVEKL---EETNNLLKDVSRPILK 594
>gi|242086611|ref|XP_002439138.1| hypothetical protein SORBIDRAFT_09g001240 [Sorghum bicolor]
gi|241944423|gb|EES17568.1| hypothetical protein SORBIDRAFT_09g001240 [Sorghum bicolor]
Length = 878
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/492 (45%), Positives = 327/492 (66%), Gaps = 29/492 (5%)
Query: 186 PY----QPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARG 241
PY QP N P +N++P I P++ALNPY+ RW I ARVTAK DLR Y+++RG
Sbjct: 341 PYKMRNQPNEQVTNLPPNAENKSPFCITPVSALNPYETRWKIMARVTAKTDLRHYSSSRG 400
Query: 242 DGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEW 301
GKVFSFDLLD GGEIR TCFNA D+F+++IEV +VYLIS GS+KPA KN+N L +E+
Sbjct: 401 PGKVFSFDLLDGQGGEIRATCFNAQADQFFDLIEVDKVYLISNGSVKPALKNYNSLNHEY 460
Query: 302 EIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK 361
EI L+ +++++C ++D +IP+Q+++FR ISEIE+ E IVD+IGIV SV PS ++RK
Sbjct: 461 EITLDNKTSIEVCVDDDSNIPRQEYNFRQISEIENIEAGVIVDLIGIVTSVGPSAIVMRK 520
Query: 362 NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG 421
+G + Q+R L LKD S RS+E+ LWG FC+ EG +LQ + D G P+LS+KSG+V DFSG
Sbjct: 521 DGTQAQKRTLQLKDMSVRSMEIILWGKFCDAEGHQLQLLCDSGSNPILSLKSGRVCDFSG 580
Query: 422 KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIK 481
+S+ TI STQL +NPDF A L++W+ + GKN A +S+S+ I + ++N + KT++QIK
Sbjct: 581 RSVVTISSTQLKVNPDFPVAKRLKQWYVTEGKNTACISLSQGI-SNMSRNHVLKTIAQIK 639
Query: 482 NEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQE 541
+E LGRS+KPD++TVRA ++ + +D+FCY AC L + ++C +G R +
Sbjct: 640 DENLGRSDKPDFITVRAVLSHVGADNFCYQACTLELNGKRCC-SFEFNGKRCYKKLVRKP 698
Query: 542 IDECDYRYLLQA-----------------QIQDQTGLTWVTAFQESGEEILGCPAKELYM 584
I D L+ I+D TG T+ TAFQE+GE I G A+EL+M
Sbjct: 699 ITVIDAIRALKTVIDAIRALKTVIDGIVIDIKDHTGTTYATAFQEAGEVIFGHTAQELFM 758
Query: 585 LKYELQDDVR---FGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESR 641
++ Q + R F EI+++ ++ +YLF+LK+ E+ Y EQRVK T+I +++ E+
Sbjct: 759 IRNVEQGEERFKEFTEIMQAIIWREYLFKLKVDEKTYNGEQRVKCTIIGVEKLE---ETN 815
Query: 642 YLLDLISKSFRK 653
LL +S+ K
Sbjct: 816 NLLKDVSRPILK 827
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 21 KPLVQVMDIKLI--GSTQE--RYRFLISDS-VSTQHAMLATQLNDRVKTGQVKKGSVVQL 75
+P++Q+ D + G+ E RYR +SD Q MLA LN V G +++G+V+++
Sbjct: 62 RPVLQLADAPQMAGGAASESGRYRVALSDGGARLQPGMLAASLNHLVARGALRRGTVIRV 121
Query: 76 IDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIF 110
++Y + ++II+V+ +E + +C I +P IF
Sbjct: 122 LEYFAGFSRTQRIIIVIQLEILQAECMLIRSPTIF 156
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 30/113 (26%)
Query: 1 MPVNLTPNSISLIN---GGDVNSKPLVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQ 57
M LTP ++ I+ G+ KP++QV+D+++
Sbjct: 257 MSAQLTPGAVVAISEHADGNGTLKPMLQVVDVRM-------------------------- 290
Query: 58 LNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIF 110
N V G ++KGS++ L ++ C+T+QNR++I+V + + +C +GNPK +
Sbjct: 291 -NTCVLDGSIRKGSIIHLQEFTCNTIQNRRLIIVTKLYVLQSECNIMGNPKPY 342
>gi|307109191|gb|EFN57429.1| hypothetical protein CHLNCDRAFT_30347 [Chlorella variabilis]
Length = 721
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/468 (45%), Positives = 303/468 (64%), Gaps = 16/468 (3%)
Query: 189 PPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSF 248
PPPN + +NEAP+ I+PI ALN YQ RW IKARVT K D+RRY NARG+GK FSF
Sbjct: 174 PPPN-----QVARNEAPSHIMPINALNSYQNRWTIKARVTNKSDIRRYTNARGEGKFFSF 228
Query: 249 DLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEAT 308
DLLD+ GGEIRV C+N DR+ +I+ G+VYLISK SL+ + NFN ++++EI LE +
Sbjct: 229 DLLDAQGGEIRVVCWNDQCDRWEPVIDQGKVYLISKASLRNKRGNFNQTRHQYEIHLENS 288
Query: 309 STVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQR 368
S V+ C EEDD IP F+F I+ +E + +DVIG+V +V V I +++G +TQ+
Sbjct: 289 SVVEACNEEDD-IPHIYFNFCKIAAVEDTPPGNSLDVIGVVENVMDWVTITKRDGTDTQK 347
Query: 369 RILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIP 428
R L ++D S RS+ELTLWG + N+ G LQ G P++++KS +V DF+GK++ T+
Sbjct: 348 RSLTIRDDSNRSIELTLWGKYANEPGDHLQAAFQNGVHPIVAIKSARVGDFNGKTLSTVA 407
Query: 429 STQLFINP-DFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGR 487
S+ + ++P D EA +LR+W+DSGG ++SR G +N+ T++QIK+EGLG
Sbjct: 408 SSTVMVDPLDVPEAVQLRQWYDSGGATMVAEALSR---PSGGRNDRRITLAQIKDEGLGL 464
Query: 488 SEKPDWVTVRAFITFIKSDSFCYTACPLMIGD-RQCNKKV--TQSGNRWQCDRCNQEIDE 544
EKPDWV V ITF+++++ Y ACP + + RQCNKK+ Q G W C+RCN E
Sbjct: 465 GEKPDWVLVSGAITFLRNENMFYAACPNKLAEGRQCNKKLQDNQDGT-WSCERCNGNF-E 522
Query: 545 CDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVF 604
+YRY+L Q+ D TG WVTAFQE G +I+G A +L ++ L D+ F ++ F
Sbjct: 523 PEYRYMLNFQLSDHTGEAWVTAFQEQGLDIMGRSAADLKDMQQTL-DEGDFSSYMQDLNF 581
Query: 605 NQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSFR 652
YL +LK+ E+Y DE +++ + + N++ E + LLD+I K R
Sbjct: 582 RHYLMKLKVTNEVYNDETKLRTSAVSVMAPNFTQEGKALLDMIGKMER 629
>gi|255076569|ref|XP_002501959.1| predicted protein [Micromonas sp. RCC299]
gi|226517223|gb|ACO63217.1| predicted protein [Micromonas sp. RCC299]
Length = 867
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 242/678 (35%), Positives = 377/678 (55%), Gaps = 56/678 (8%)
Query: 16 GDVNSKPLVQVMDIKLIGS-------TQERYRFLISDSVSTQHAMLATQLNDRVKTGQVK 68
GD P +Q+ D++ + S + +R+R ++SD AML++QLN V G+++
Sbjct: 17 GDDGLMPTLQIADLRALQSKDGNSDDSNKRFRVMLSDGQHYVTAMLSSQLNPLVLDGKLE 76
Query: 69 KGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQ 128
K +VV+L +Y+C T+ NRKII+ L + + IG P + ++ S + PQ
Sbjct: 77 KFTVVKLTEYLCQTINNRKIIIALQLNVGGKPLDIIGQP-------IACEQAASSGDAPQ 129
Query: 129 P-VRVNNYSAP---NSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVR------- 177
P + N SAP +G Q T+ G++ P TF
Sbjct: 130 PPMGGNQPSAPRTLGAGGNYGQPQNTYGGAG-GNYGQPQQ-TFGNYGNYGGGVPGGNYGA 187
Query: 178 --------------SFQPTVQPPYQP--PPNFRNHGPILKNEAPARIIPIAALNPYQGRW 221
S+ P Q PP + N G +++NEAP RI PI++LNPY RW
Sbjct: 188 PPGGGQPPAGQPAPSYGGYGANPNQQNIPPQYSNRGAVMRNEAPHRITPISSLNPYMNRW 247
Query: 222 AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYL 281
I+ RVT + +R ++NARGDGKV + DLLDS+GGEI+ CFN ++F ++ + GRVY
Sbjct: 248 TIRVRVTNQPAIRTWHNARGDGKVLNVDLLDSEGGEIKAVCFNDTAEKFSQVFQGGRVYD 307
Query: 282 ISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD--SIPKQQFSFRHISEIESAEN 339
ISKG++ + E+EI L+ TS VD T+ SI K ++F+ I+ IE A
Sbjct: 308 ISKGAISQVKNKKYSGGAEFEIRLDNTSLVDEVTDPQAVASIKKIHYNFQKIASIEDAMV 367
Query: 340 NSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQE 399
++DVIG+V +V I++++G ET +R ++++D SG SVELT+W G KL+
Sbjct: 368 GGMIDVIGVVHTVGDLATIMKRDGGETSKRSVHIRDDSGASVELTMWAPHAVDIGGKLEA 427
Query: 400 MVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVS 459
MV+ G PVL+VK+G+V +F GK+IGT+ ST + +NPD EA +LR W+D+ G ATV+
Sbjct: 428 MVNGGEHPVLAVKNGRVGEFQGKNIGTVGSTNIDVNPDLTEAAKLRHWYDAEGGATATVA 487
Query: 460 ISREIAAGGAKNEIHKTVSQIKNE--GLGRSEKPDWVTVRAFITFIKS--DSF-CYTACP 514
GG K + +++Q+K+E +G + P WV R IT+IK+ DS Y ACP
Sbjct: 488 TLGGGGGGGGKGDRCVSIAQLKDEIAQIG-ANPPFWVQCRCHITYIKAPQDSGPYYPACP 546
Query: 515 LMIGDRQCNKKV--TQSGNRWQCDRCNQE-IDECDYRYLLQAQIQDQTGLTWVTAFQESG 571
L GDR C KK+ ++ W C+R + E + C++RY+L + D TG WV+AF + G
Sbjct: 547 LQNGDRMCQKKLRFDEAQGSWNCERHSGEHVPHCEWRYILNMTVSDHTGQHWVSAFGDQG 606
Query: 572 EEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRA 631
+ I+G A EL+ L + + + + +++ F ++ +LK+KE+ Y E R K + R
Sbjct: 607 DVIMGMKASELHRLYND--NHAAYEQALQNANFTSHMMKLKVKEDNYNGETRPKTELSRI 664
Query: 632 DQVNYSSESRYLLDLISK 649
+ ++Y +ES+ +LD I+K
Sbjct: 665 EVIDYVAESKRMLDKIAK 682
>gi|449527292|ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Cucumis sativus]
Length = 425
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 177/272 (65%), Positives = 227/272 (83%), Gaps = 2/272 (0%)
Query: 379 RSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDF 438
RSVELTLWG+FC EGQ+LQ M D G FPVL+VKS +V+DF+GK++GTI ++QLFI PDF
Sbjct: 1 RSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGKAVGTISTSQLFIEPDF 60
Query: 439 AEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRA 498
EAH LREWF+ G++ +VSISRE+A+ G + ++ KT+SQIK+E LG SEKPDW+TV A
Sbjct: 61 PEAHSLREWFEREGRSTLSVSISREVASVG-RTDVRKTISQIKDERLGTSEKPDWITVSA 119
Query: 499 FITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQD 557
++FIK DSFCYTACP+MIGDRQC+KKVT +G+ +W+CDRC+Q +DECDYRY+LQ QIQD
Sbjct: 120 TVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQD 179
Query: 558 QTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEEL 617
TGLTWVTAFQE GEEI+G PAK LY LKYE QDD +F EIIR +F +++ +LKIKEE
Sbjct: 180 HTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKIKEET 239
Query: 618 YGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+ DEQRV+ TV++A+ +N+SSESR+LL+L+ K
Sbjct: 240 FSDEQRVRSTVVKAESINFSSESRFLLNLMEK 271
>gi|356551666|ref|XP_003544195.1| PREDICTED: LOW QUALITY PROTEIN: replication protein A 70 kDa
DNA-binding subunit-like [Glycine max]
Length = 424
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/321 (56%), Positives = 242/321 (75%), Gaps = 2/321 (0%)
Query: 244 KVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI 303
+VFSFD++DSDGGEIR TCFNAV D+FY +IE G+VYLIS+GS+K AQKNFNHL N+ E+
Sbjct: 95 QVFSFDVVDSDGGEIRPTCFNAVADQFYNVIEAGKVYLISRGSIKLAQKNFNHLHNDQEL 154
Query: 304 FLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNG 363
L+ S + +++DSI F++ ISEIES ENN+IVDVIG+V S+ P+ I+RKNG
Sbjct: 155 TLDVASIIQPFLDDNDSITSHTFNYCPISEIESLENNNIVDVIGVVTSIRPTTSIMRKNG 214
Query: 364 METQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS 423
+ Q+R L LKD SGRSVELTLWG+FC EG++LQ + G FP+L+ K+ ++NDF+GKS
Sbjct: 215 TKVQKRTLXLKDMSGRSVELTLWGNFCIVEGKRLQTICHAGEFPILATKAVRLNDFNGKS 274
Query: 424 IGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNE 483
+GTI ++QL++ DF EA L+ WF++ GK+ T+SIS E++ G K ++ KT+SQIK+E
Sbjct: 275 VGTIATSQLYVEADFLEACTLKRWFENEGKSVPTLSISTEMSNMG-KTDVRKTISQIKDE 333
Query: 484 GLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEI 542
LG SEKPD ++V ++ IK D+FCY CPL IGDRQCNKKVT + + W C+RCNQ I
Sbjct: 334 KLGTSEKPDRISVFVVVSHIKVDNFCYPGCPLKIGDRQCNKKVTNNADGTWHCERCNQPI 393
Query: 543 DECDYRYLLQAQIQDQTGLTW 563
CD+RYLL QIQD T +TW
Sbjct: 394 SACDFRYLLSMQIQDHTSITW 414
>gi|384246948|gb|EIE20436.1| replication factor-a protein [Coccomyxa subellipsoidea C-169]
Length = 630
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 232/646 (35%), Positives = 363/646 (56%), Gaps = 43/646 (6%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLI---GSTQERYRFLISDSVSTQHAMLATQLNDR 61
L+ ++ I G + K +VQ++ +K + G ++R+R +SD A+ ATQL+D
Sbjct: 8 LSAGAVQAIADGAQDIKAVVQIIGVKPVPNKGDGKQRHRLALSDGQHWITAIPATQLDDL 67
Query: 62 VKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESEL-TAQKT 120
V V GSV++L +Y+ + V NR+++++L ++ + + + K+ +E+ Q +
Sbjct: 68 VTNQVVVVGSVIRLEEYLFNNVNNRQVLILLQLDNLGI------SDKMADATEVGKGQNS 121
Query: 121 IPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQ 180
+ P P+ S P + N ++ + + G
Sbjct: 122 GGNAGGPAPLLGGAGSGPYA---------AINGEDAPLYEADMTACAAGGYGGGGGGGGG 172
Query: 181 PTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNA- 239
Q N++ HGPI +NEAP RI+PI++LN YQ W IKAR+T K ++RRY+NA
Sbjct: 173 GYGQNG-----NYKGHGPIARNEAPPRIVPISSLNSYQSHWTIKARITNKSEIRRYSNAP 227
Query: 240 -----RGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKN- 293
GK+FSF+LLD+ GGEIR FN VD+F I++ G V ++SK SLK +
Sbjct: 228 KCAWCMHAGKLFSFELLDAQGGEIRGCGFNQCVDKFEPIMQQGAVIMMSKASLKNKKPGS 287
Query: 294 -FNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV 352
FN+ ++++EI LE + +++C E++ +IPK Q+ F + E+ N VD+IGIV V
Sbjct: 288 AFNNTRHDYEITLEPNTVIEVCEEDERAIPKMQYHFIKVKELNDKFANETVDIIGIVDKV 347
Query: 353 NPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVK 412
+PS I + G E +R ++++D SG SVE+TLWG + ++ G +L+E+ + G VL++K
Sbjct: 348 DPSAVIQTREGKELMKRNISIRDDSGASVEITLWGTYSSEPGDQLEEVFNGGVHSVLALK 407
Query: 413 SGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSI---SREIAAGGA 469
+ K+ D++G+++ T+ +T L ++PD EA LR WFDS G AA VS + GG
Sbjct: 408 NAKIGDYNGRTLSTVSTTTLTVDPDVPEAGHLRHWFDSAGGAAAPVSALTSGSGASVGGG 467
Query: 470 KNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQS 529
K + T++ IK E LG + WV + ITF+KSD Y AC L +QCNKKVT S
Sbjct: 468 KGDRRVTLATIKEEALGTNSTNAWVQIVCTITFVKSDPIAYPACTLQYNGKQCNKKVTDS 527
Query: 530 G-----NRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYM 584
G NRW C+RC+ E +YRY+L I+D +G WVTAFQE G++I+G A E+
Sbjct: 528 GGGDGPNRWWCERCSAAC-EAEYRYMLNLNIEDHSGKEWVTAFQEEGKQIIGYTANEMQE 586
Query: 585 LKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIR 630
LK + F + YLF+LK+ E+ + DEQR++I V+R
Sbjct: 587 LKE--AESPLFEARLNDVKCRSYLFKLKVSEDTWQDEQRIRINVVR 630
>gi|356554165|ref|XP_003545419.1| PREDICTED: LOW QUALITY PROTEIN: replication protein A 70 kDa
DNA-binding subunit-like [Glycine max]
Length = 450
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/343 (55%), Positives = 243/343 (70%), Gaps = 7/343 (2%)
Query: 227 VTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS 286
V A G R + A +VFSFD+ D DGGEIR TCFN V D+FY +IE G+VYLISKGS
Sbjct: 74 VFAHGVARFLSCAYWVLQVFSFDVADFDGGEIRATCFNVVADQFYNVIEAGKVYLISKGS 133
Query: 287 LKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVI 346
+KPAQKNFNHL N+ E+ L+ S + +++DSI Q F++ ISEIES ENNSIVDVI
Sbjct: 134 IKPAQKNFNHLHNDQELTLDVASIIQPFLDDNDSITSQTFNYXPISEIESLENNSIVDVI 193
Query: 347 GIV-----ISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMV 401
G+V S+ P+ I+RKNG E Q+R L LKD SGRSVELTLWG+FC EGQ+LQ +
Sbjct: 194 GVVTLLDRTSIRPTTSIMRKNGTEVQKRTLQLKDMSGRSVELTLWGNFCIVEGQRLQTIC 253
Query: 402 DVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSIS 461
D G FPVL+ K+ ++NDF+GK + TI ++QL++ DF EA L+ WF + K+ T+SIS
Sbjct: 254 DAGEFPVLATKAVRLNDFNGKYVETIATSQLYVEADFPEACTLKRWFKNEEKSVPTLSIS 313
Query: 462 REIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQ 521
RE++ G K ++ KT+S IK+E LG SEKPDW++V ++ IK D+FCY C L IGDRQ
Sbjct: 314 RELSNLG-KTDVRKTISXIKDEKLGTSEKPDWISVFVVVSHIKVDNFCYPGCLLKIGDRQ 372
Query: 522 CNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTW 563
CNKKVT + + C+RCNQ ID CD+RYLL QI D T +TW
Sbjct: 373 CNKKVTNNADGTXHCERCNQSIDACDFRYLLSMQIXDHTSITW 415
>gi|302836243|ref|XP_002949682.1| hypothetical protein VOLCADRAFT_104448 [Volvox carteri f.
nagariensis]
gi|300265041|gb|EFJ49234.1| hypothetical protein VOLCADRAFT_104448 [Volvox carteri f.
nagariensis]
Length = 900
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/475 (42%), Positives = 293/475 (61%), Gaps = 18/475 (3%)
Query: 188 QPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFS 247
+PPP ++ G I ++EAP RI+PI+ALNPY RWAI+ RVT+KG+LRR+ N +G+GKVFS
Sbjct: 225 RPPPQYQAQGAIARDEAPPRIMPISALNPYIARWAIRGRVTSKGELRRWTNVKGEGKVFS 284
Query: 248 FDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEA 307
FDLLD GG+IR T F A D+F+E IEVG +Y ISK SL + FN +++EI L+
Sbjct: 285 FDLLDLAGGDIRATAFGAEADKFFETIEVGAIYQISKASLTQKKPQFNPTSHDYEIRLDR 344
Query: 308 TSTVDLCTEEDDS--IPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME 365
S V+ E+ ++ IP F+FR I+++E+AE S+VD+IG+V + + I R+ G E
Sbjct: 345 NSLVERVPEDKETSQIPSISFNFRRIADLETAEAGSMVDIIGLVETCDAWQSITRRTGEE 404
Query: 366 TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIG 425
TQ+R + ++D SGRS+E+TLWG N G ++++MV G PV + K+ +V DF+GK++
Sbjct: 405 TQKRSMVVRDESGRSIEVTLWGPLVNNPGDQIEQMVRSGARPVFAAKALRVGDFNGKTLS 464
Query: 426 TIPSTQLFINP-DFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHK--TVSQIKN 482
TI S+ L I+P D A LR W+D GG++ A S+S GGA + + T S IK
Sbjct: 465 TIGSSVLRIDPMDLPAAQRLRSWYDGGGRSQAVNSLSSAGMGGGAGGKADRRTTFSAIKG 524
Query: 483 EGLGRSEKPDWVTVRAFITFIKSDS-------FCYTACPLMIGDRQCNKKVTQ-SGNRWQ 534
E LG S KPDW+TV A + +K+DS Y +CP R C KK+ G W
Sbjct: 525 EHLGTSGKPDWITVSAVVDMVKTDSQGGGPSAVVYPSCPHDFNGRPCQKKMMDIGGGNWN 584
Query: 535 CDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYE-LQDDV 593
C+RCN + +RYL+ D T ++TAF ++G+ I G A E+ L+ E Q+
Sbjct: 585 CERCNYSTENPAWRYLVSMSACDHTSKQYLTAFGDAGDAIFGRTAAEVRQLEAENTQEFD 644
Query: 594 RFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQV-NYSSESRYLLDLI 647
R E IR F ++FRLK+ E+ Y DE R+K+++ R +++ ++ E +L I
Sbjct: 645 RLTESIR---FTSFIFRLKVAEDHYNDEARIKVSIYRLERLTDFVKEGNLMLQYI 696
>gi|303276565|ref|XP_003057576.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460233|gb|EEH57527.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 835
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 232/691 (33%), Positives = 372/691 (53%), Gaps = 63/691 (9%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLIGSTQE--------RYRFLISDSVSTQHAMLAT 56
LTP + ++ GD P++QV D++ + + E R+R ++SD AML +
Sbjct: 6 LTPGAALRLHAGDSGLSPILQVADLRALQNKDEKAGANAEPRFRVMLSDGTHYVTAMLTS 65
Query: 57 QLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELT 116
QLN V ++KK +VVQL +Y + VQ RKII+ L + I + IG P ++++
Sbjct: 66 QLNSHVIENRLKKFTVVQLEEYFSNEVQGRKIIIALKLTPIDTPPDIIGQPVSATDADKN 125
Query: 117 AQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIV 176
A P + PN G + PG + P +G + AP S
Sbjct: 126 AA----------PPQQQQQQHPNPGGYGANPGYGQQPSAPGYGNAP-TGNYGAPPPPSAN 174
Query: 177 RSFQPTVQPPY------------------QPPPNFRNHG--PILKNEAPARIIPIAALNP 216
++ Y +PPP++ +G P +N+APA+I PI++LNP
Sbjct: 175 GNYGGGNGGGYGAGAYRGDQGRGGGGGYGEPPPSYGAYGRGPTARNDAPAKISPISSLNP 234
Query: 217 YQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEV 276
Y RW I+ARVT ++R Y+N +GDGKVF+ +LLD++GGEI+ F +RF ++
Sbjct: 235 YNNRWTIRARVTNNPEIRTYHNHKGDGKVFNVELLDAEGGEIKAVAFGDTAERFADVFRA 294
Query: 277 GRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD-----SIPKQQFSFRHI 331
G VY +SKG ++P +N E+E+ L+ + V E DD SI + ++F+ I
Sbjct: 295 GSVYELSKGQIRPV-RNPKFSVGEFEMMLDHNTEV---REIDDPAVVGSIKRVNYAFKKI 350
Query: 332 SEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCN 391
++++ + S+VDV +V V I++++G ET +R + L+D SG S+ELTLW
Sbjct: 351 ADVDHISSGSLVDVCAVVHHVGELNTIMKRDGGETSKRSITLRDDSGASIELTLWAPQAL 410
Query: 392 KEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSG 451
G +L+ +V+ G PV+++K+G+V DF GK+IGTI S+++ INPD EA LR W+D+G
Sbjct: 411 DIGGRLEGLVNDGDHPVIAIKNGRVGDFQGKNIGTINSSRVDINPDVDEAARLRHWYDTG 470
Query: 452 GKNAATVSI-SREIAAGGAKNEIHKTVSQIKNEGLGRSEKPD-WVTVRAFITFIK-SDSF 508
G A + + GG + + T++Q+K E P WV R +T++K SD+
Sbjct: 471 GATAEVKAFSGAGASGGGGRGDRCVTIAQLKEEIARDGATPAFWVQCRCHVTYLKSSDAG 530
Query: 509 C-YTACPLMIGDRQCNKKV--TQSGNRWQCDR-CNQEIDECDYRYLLQAQIQDQTGLTWV 564
C Y ACPL G+R C KK+ ++ W C+R + + C++RY++ + D TG WV
Sbjct: 531 CFYPACPLRNGERMCQKKLRYDEAMGTWNCERHAGEHVPNCEWRYIINMTVADHTGQQWV 590
Query: 565 TAFQESGEEILGCPA---KELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDE 621
+AF ++G+ I+G A KEL Y+ + + I F Q+L + K+ ++ Y DE
Sbjct: 591 SAFGDTGDVIMGMTAGALKELMDTNYDA-----YEKAIADANFKQFLMKFKVADDTYNDE 645
Query: 622 QRVKITVIRADQVNYSSESRYLLDLISKSFR 652
RVK+++ + D ++Y SES+ +LD I K R
Sbjct: 646 TRVKVSLNKLDAIDYVSESKRMLDQIGKLRR 676
>gi|156369841|ref|XP_001628182.1| predicted protein [Nematostella vectensis]
gi|156215152|gb|EDO36119.1| predicted protein [Nematostella vectensis]
Length = 626
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 222/642 (34%), Positives = 361/642 (56%), Gaps = 59/642 (9%)
Query: 21 KPLVQVMDIKLI----GSTQERYRFLISDSVSTQ-HAMLATQLNDRVKTGQVKKGSVVQL 75
+P+ Q++ +K I G +RYR ++SD V AMLATQLND+V G+++ +VV+L
Sbjct: 27 QPVFQILGLKKIQPKQGDASDRYRLVLSDGVLIHTSAMLATQLNDKVTDGEIEVKAVVRL 86
Query: 76 IDYICSTVQ-NRKIIVVLNMETIILDCE---PIGNPKIFSESELTAQKTIPSNNLPQPVR 131
YIC+ +Q RK++++L + T+ E IGNP+ +++ Q+ N P P
Sbjct: 87 DKYICNIIQETRKVLILLELTTVKRASEVPGKIGNPRNAADNNAGGQQN--GNAAPAPKN 144
Query: 132 VNNYSAPNSGTFNLQNSGTFNSQN--PGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQP 189
V G+F QN P + + GS +S QP
Sbjct: 145 VG--------------GGSFGGQNNPPAQRQQAQTFGSKGFGGGSSYKSNQPV------- 183
Query: 190 PPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFD 249
N G + + PI+ L PYQ RW I+AR+T+K ++R +NN+RG+G++F+ +
Sbjct: 184 -----NRG----GDGAKTVFPISGLTPYQNRWTIRARITSKSNIRTWNNSRGEGRLFNVE 234
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
++D + GEIR T FN VD+FY+++EV +V+ I+KGSL+ A K ++ ++N++E++L +
Sbjct: 235 MVD-ESGEIRATGFNEAVDKFYQMLEVDKVFYITKGSLRTANKQYSSIRNDYEMYLNNDT 293
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK-NGMETQR 368
++ C E + +P Q++F +I ++E+ + IVD++G+V +V I K + +
Sbjct: 294 IIEPCNETCN-LPTLQYNFVNIGDLENINKDQIVDILGVVTNVGDLAQITTKTTNKQVSK 352
Query: 369 RILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIP 428
R + L D S +SV TLWGD E +K +E G PVL+++ KV+DF G+S+ +
Sbjct: 353 RDITLLDRSEKSVTATLWGD----EAEKFEE--HAGKNPVLAIRGAKVSDFGGRSLSVLN 406
Query: 429 STQLFINP-DFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGR 487
S+ + +NP D EA LR W+D+ GKN SIS + + G + K +SQIKNE LG
Sbjct: 407 SSNMRVNPVDMKEAQVLRGWYDNTGKNNEVASISGQRYSAGGGGPL-KFLSQIKNEQLGM 465
Query: 488 SEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDY 547
EK D+++V+ + + ++ Y ACP +CNKKV + + + C++C ++ Y
Sbjct: 466 GEKADYISVKGVCVYFRRENCMYKACP----SEECNKKVIEEDSGFYCEKCGRKYPNYKY 521
Query: 548 RYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQY 607
R +L A + D TG WVT FQES E +LG A +L +K E QD+ +F ++ S F +
Sbjct: 522 RLILSAHLADFTGSQWVTCFQESAEALLGRSASDLGQMK-ENQDEAQFDQVFASSEFKLH 580
Query: 608 LFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
F+++ K E Y +E R+K +V+ VNY ES+ L+D + K
Sbjct: 581 TFKIRAKMETYNEETRLKCSVVNVVPVNYKQESKRLIDEVKK 622
>gi|159491651|ref|XP_001703773.1| replication protein A, 70 kDa DNA-binding subunit [Chlamydomonas
reinhardtii]
gi|158270454|gb|EDO96299.1| replication protein A, 70 kDa DNA-binding subunit [Chlamydomonas
reinhardtii]
Length = 451
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/454 (42%), Positives = 283/454 (62%), Gaps = 11/454 (2%)
Query: 188 QPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFS 247
+PP N++ +G I +++AP R IPI+ALNPY RWAI+ARVT+KG+LRR+ N RG+GKVFS
Sbjct: 1 RPPANYQANGAIARDDAPPRFIPISALNPYTARWAIRARVTSKGELRRWTNVRGEGKVFS 60
Query: 248 FDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEA 307
FDLLD DGGEIR T F A D+F+E++E G +Y ISK SL + FNH +++EI L+
Sbjct: 61 FDLLDKDGGEIRATAFGAEADKFFEVVEAGAIYQISKASLTNKRPQFNHTNHQYEIKLDR 120
Query: 308 TSTVDLCTE--EDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME 365
S V+ E E IP ++FR I+++E+AE ++VD+IG+V + P I R+ G E
Sbjct: 121 NSMVERVAEDPETSQIPTISYNFRRITDLETAEAGTVVDIIGVVETCEPWQTITRRTGEE 180
Query: 366 TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIG 425
TQ+R + ++D SGRS+E+TLWG N G ++++MV G PVL+ K+ +V D++GK++
Sbjct: 181 TQKRSMVVRDDSGRSIEVTLWGALVNNPGDQIEQMVRGGGRPVLAAKALRVGDYNGKTLS 240
Query: 426 TIPSTQLFINP-DFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTV-SQIKNE 483
T+ ++ L ++P D A +R W++ GGK A S+S GG +TV S IK+E
Sbjct: 241 TVGASALRLDPMDLPAAQRVRGWYNGGGKAQAVNSLSAAGGGGGGGRTDRRTVLSAIKDE 300
Query: 484 GLGRSEKPDWVTVRAFITFIK--SDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQ 540
LGRS K DWV V A + IK + + Y +CP R C KK+ G W CDRC
Sbjct: 301 NLGRSGKADWVNVSAVLDMIKGGASAVVYPSCPHDFNGRPCQKKMMDVGGGNWNCDRCQF 360
Query: 541 EIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYEL-QDDVRFGEII 599
+ +RYL+ D T +TAF ++G+ I G A E+ ++ + Q+ R E I
Sbjct: 361 STENPAWRYLVSLSACDHTAKQSLTAFGDAGDAIFGRSATEVRNMEVDRPQEFDRLAESI 420
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQ 633
R F + FRLK+ E+ Y DEQR+K+++ + ++
Sbjct: 421 R---FTPFFFRLKVAEDNYNDEQRIKVSIYKMER 451
>gi|443719869|gb|ELU09821.1| hypothetical protein CAPTEDRAFT_172916 [Capitella teleta]
Length = 608
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 225/643 (34%), Positives = 353/643 (54%), Gaps = 63/643 (9%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLIGSTQ--ERYRFLISDSV-STQHAMLATQ 57
M NLT +I I GG P++Q +D K I S Q +R+R L+SD V S AMLATQ
Sbjct: 1 MSYNLTAGAIEDIMGGSKVESPILQCLDWKKISSQQGADRFRLLLSDGVCSHSSAMLATQ 60
Query: 58 LNDRVKTGQVKKGSVVQLIDYICSTVQ-NRKIIVVLNMETIILDCE---PIGNPKIFSES 113
LND+V G+++ SV++L Y+C+T+ NR+++++L + I + +GNP +
Sbjct: 61 LNDKVTNGELEPNSVIKLDKYLCNTINGNRRVMILLEITVIAKGAQVGSRLGNPTPYKLG 120
Query: 114 ELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
E K + QPV + P +QNS + N QN P + + ++
Sbjct: 121 ESKEAK------VEQPV-----AKP------VQNSISNNQQNK-----PQNSFYNNSSSK 158
Query: 174 SIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDL 233
V + QP++ P ++P R+ PI++LNPYQ RW IK RVT+K +
Sbjct: 159 PFVAA-QPSINGP---------------GDSPVRVHPISSLNPYQNRWTIKVRVTSKSQI 202
Query: 234 RRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKN 293
R ++N+RG+GK+FS +D D GEI+ T F VD+FY++IE+ +V+ + KG+LK A K
Sbjct: 203 RTWSNSRGEGKLFSMTFMD-DSGEIKATAFKDQVDKFYDMIEMNKVFFVKKGTLKTADKR 261
Query: 294 FNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVN 353
+N N++E+ + + C ++D S+P F+F I ++S E NS VDV+G+V SV
Sbjct: 262 YNTTDNDYEMTFNNDTEIIPC-DDDTSLPTINFNFVEIGNLQSVEPNSNVDVLGVVKSVA 320
Query: 354 P-SVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVK 412
S ++ E ++R L L D V LTLWG E + M + PV++ K
Sbjct: 321 EVSTITTKQTNKELKKRELELVDRGQVLVRLTLWG----LEAENFNSMNN----PVVAAK 372
Query: 413 SGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNE 472
+ +V+DF G+S+ S+QL +NPD +AH+LR W+DS G+NA + S E A G+ +
Sbjct: 373 NVRVSDFGGRSLSCGSSSQLVLNPDIPQAHQLRGWYDSEGRNADFNAYSSEAAGSGSHST 432
Query: 473 IHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGN 531
K+ +K++ LG EK D+ T + I +++ ++ Y ACP CNKKV Q+
Sbjct: 433 NWKSFGDVKSQNLGTGEKGDYFTAKGTIVYLRKENCMYMACP----QADCNKKVVDQANG 488
Query: 532 RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQD 591
++C++C +E +R +L A + D + WVT FQES E +LG A EL L+ E +
Sbjct: 489 YYRCEKCQKEFPNFKWRMILSANVADFSDNQWVTCFQESAENVLGISADELGKLRSE--N 546
Query: 592 DVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQV 634
+ F ++ VF Y+ L+ K E Y +E R+K+ ++A V
Sbjct: 547 EAAFDKVFDESVFKSYVMTLRAKMETYNEETRLKVICLKATPV 589
>gi|332257541|ref|XP_003277864.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit
[Nomascus leucogenys]
Length = 616
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 229/651 (35%), Positives = 362/651 (55%), Gaps = 60/651 (9%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD N KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ Q+
Sbjct: 12 AIMQKGDTNIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNLLVEQEQL 71
Query: 68 KKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNL 126
V Q+ YI +T+++ R++++++ +E ++ E +G
Sbjct: 72 SSNCVCQINRYIVNTLKDGRRVVILMELE-VLKSAEAVG--------------------- 109
Query: 127 PQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPP 186
V++ N N G Q + + +P + S P P GS PTV
Sbjct: 110 ---VKIGNPVPYNEGLGQPQVAPPAPAASPAASSRPQ------PQNGS--SGAGPTVSKA 158
Query: 187 YQPPPNF-RNHGPILKNEAP---ARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGD 242
Y F + GP L + + ++++PIA+L PYQ +W I ARVT K +R ++N+RG+
Sbjct: 159 YGASKTFGKAAGPSLSHTSAGTQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGE 218
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE 302
GK+FS +L+D + GEIR T FN VD+F+ +IEV +VY SKG+LK A K F +KN++E
Sbjct: 219 GKLFSLELVD-ESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYE 277
Query: 303 IFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRK 361
+ ++V C E+D +P QF F I ++E+ +S+VD+IGI S + I +R
Sbjct: 278 MTFNNETSVMPC-EDDHHLPTVQFDFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRS 336
Query: 362 NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG 421
N E +R + L DTSG+ V TLWG+ +K Q PVL++K +V+DF G
Sbjct: 337 NNREVAKRNIYLMDTSGKVVTATLWGEDADKFDGSRQ--------PVLAIKGARVSDFGG 388
Query: 422 KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQI 480
+S+ + S+ + +NPD EA++LR WFD+ G+ VSIS + G G N KT+ ++
Sbjct: 389 RSLSVLSSSTIIVNPDIPEAYKLRGWFDAEGQALDGVSISDLKSGGVGGANTNWKTLYEV 448
Query: 481 KNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCN 539
K+E LG+ +KPD+ + A + +++ ++ Y ACP + CNKKV Q ++C++C+
Sbjct: 449 KSENLGQGDKPDYFSSVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCD 504
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEII 599
E YR +L I D WVT FQES E ILG A L LK +++ F E+
Sbjct: 505 TEFPSFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELKD--KNEQAFEEVF 562
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
++ F ++FR+++K E Y DE R+K TV+ V+Y R L+ I +S
Sbjct: 563 QNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVMSIRRS 613
>gi|405120230|gb|AFR95001.1| damaged DNA binding protein [Cryptococcus neoformans var. grubii
H99]
Length = 613
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 219/642 (34%), Positives = 340/642 (52%), Gaps = 72/642 (11%)
Query: 23 LVQVMDIKLIGSTQ----ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
+VQV+++K I ST +RYR ++SD AMLATQLN V++ QV K S+V+++++
Sbjct: 26 VVQVLNVKKIASTDTTAVDRYRAILSDGQYFIQAMLATQLNHFVESKQVDKHSLVKVVNF 85
Query: 79 ICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAP 138
++V RK++++L +E + E IGNP V V+
Sbjct: 86 SVNSVSGRKLLIILALEVVPWTDEKIGNP----------------------VSVDQAKGG 123
Query: 139 NSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGP 198
S + +Q G+ S P T AP G R+ P P P N ++ G
Sbjct: 124 ASAS----------AQPGGAHSAPLQSTTTAPAPG---RAQVPARNAPSARPGNTKHKGD 170
Query: 199 ILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEI 258
+ + PI L+PYQ RW IKARVT K D+R Y+N RGDGK+F+ +D + GEI
Sbjct: 171 L------GPLYPIEGLSPYQNRWTIKARVTQKSDIRHYSNQRGDGKLFNVTFMD-ETGEI 223
Query: 259 RVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEED 318
R T FN VD FY ++EVG+V+ +S+ + A+K F+++ NE+EI E + ++ C D
Sbjct: 224 RATGFNDAVDNFYNLLEVGKVFFVSRARINIAKKQFSNVNNEYEIMFERDTEIEPCA--D 281
Query: 319 DSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTS 377
+S+P+ +++F+ I ++ + + + DVIG+V V + R +R L L D S
Sbjct: 282 ESVPQVKYNFKGIGDLGELQKDDVCDVIGVVREVGELGSVTSRATNKPFAKRELQLVDQS 341
Query: 378 GRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPD 437
G+SV LTLWG K E PV++ K KV DF G+S+ + + INPD
Sbjct: 342 GQSVRLTLWG--------KQAETFQADDQPVIAFKGVKVGDFGGRSLSMFSNATMTINPD 393
Query: 438 FAEAHELREWFDSGGKN-------AATV---SISREIAAGGAKNEIHKTVSQIKNEGLGR 487
EAH LR WFD+ G + A+V +I+ +A E+ KT++Q+K+E LG
Sbjct: 394 IPEAHSLRGWFDAEGHSKHFAAYTTASVGDSAINTATSAAARPAEL-KTIAQVKDEQLGM 452
Query: 488 SEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDY 547
SEK D+ + A + FIK D F Y AC C KKV + G+ W C++C + DE +
Sbjct: 453 SEKTDFFSTEATVAFIKKDPFSYPACA---NPDNCAKKVVEDGSGWWCEKCQRRWDEPIH 509
Query: 548 RYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQY 607
RY+L + D TG W+TAF E+ E+I+G A +L LK E +D+ + Y
Sbjct: 510 RYILSMNVMDYTGQFWMTAFNETAEQIMGISANDLMKLKNE-GNDLDYDAHFAKATARTY 568
Query: 608 LFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+F++ K++ + D+ RV+ + +Y ++S +L +IS+
Sbjct: 569 VFQMMAKQDSFNDQVRVRYQCRKVAPPDYVADSAHLSQMISE 610
>gi|167621451|ref|NP_956105.2| replication protein A 70 kDa DNA-binding subunit [Danio rerio]
gi|82185887|sp|Q6NY74.1|RFA1_DANRE RecName: Full=Replication protein A 70 kDa DNA-binding subunit;
Short=RP-A p70; AltName: Full=Replication factor A
protein 1; Short=RF-A protein 1
gi|44890707|gb|AAH66711.1| Rpa1 protein [Danio rerio]
gi|49619041|gb|AAT68105.1| replication protein A 70kd subunit [Danio rerio]
Length = 601
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 224/659 (33%), Positives = 363/659 (55%), Gaps = 72/659 (10%)
Query: 1 MPVNLTPNSI-SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLAT 56
M V L+ +I SL G +VN+ P++Q ++I+ I G+ R+R ++SD + T + ML+T
Sbjct: 1 MTVRLSEGAIESLSKGTEVNN-PILQCVNIRKIDGGNGVSRFRVMMSDGLHTMSSFMLST 59
Query: 57 QLNDRVKTGQVKKGSVVQLIDYICSTVQN-RKIIVVLNMETI-ILDCEP--IGNPKIFSE 112
QLN + Q+ V L + + +++ R+++V+L++E + D P IG+P + E
Sbjct: 60 QLNPMAEQNQLATNCVCVLKRSVTNVLKDGRRVVVILDIEVLKSADQMPGKIGDPTPYVE 119
Query: 113 SELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTF-RAPN 171
+ A T P AP + QN + GS P++ +F + P
Sbjct: 120 GQSKAPSTAP--------------APTARPLQPQNG------SDGSTYRPSAQSFGKKPM 159
Query: 172 AGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKG 231
A P P ++++PIA+LNPYQ +W I+ARVT K
Sbjct: 160 AA------------PNTPG-------------GSSKVVPIASLNPYQSKWTIRARVTNKS 194
Query: 232 DLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQ 291
+R ++N+RGDGK+FS +L+D + GEIR T FN VD+F+ +IE G+V+ ISKG+LK A
Sbjct: 195 AIRTWSNSRGDGKLFSMELVD-ESGEIRATGFNNEVDKFFSLIEQGKVFYISKGTLKIAN 253
Query: 292 KNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVIS 351
K F+ LKN++E+ L +++ C + +D +P Q F I+++ES E ++I+DVIG+ +
Sbjct: 254 KQFSSLKNDYEMTLNGETSIIPCEDSND-VPMLQCDFVSIADLESREKDTILDVIGVCKN 312
Query: 352 VNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSV 411
I+ KN E +R + L D SGR ++LT+WG E D P+L++
Sbjct: 313 AEDVARIMTKNSREVSKRNIQLIDMSGRVIQLTMWGSDA--------ETFDGSGQPILAI 364
Query: 412 KSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKN 471
K +++DF G+S+ T+ S+ + INPD EA++LR W+D G S++ GG N
Sbjct: 365 KGARLSDFGGRSLSTLYSSTVMINPDIPEAYKLRGWYDKEGHALDGQSMTELRGPGGGGN 424
Query: 472 EIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSG 530
KT++++KNE LG +K D+ + A I +I+ ++ Y ACP + CNKKV Q
Sbjct: 425 TNWKTLAEVKNEHLGHGDKADYFSCIATIVYIRKENCLYQACP----SKDCNKKVVDQQN 480
Query: 531 NRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQ 590
++C++C++E + YR +L A I D WVT FQ++ E +LG + L LK
Sbjct: 481 GMFRCEKCDKEFPDFKYRLMLSANIADFGDNQWVTCFQDTAETLLGQNSSYLGQLKD--T 538
Query: 591 DDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
++ F E+ + FN ++FR ++K E Y DE R+K+TV+ A V++ S+ L+ I K
Sbjct: 539 NEAAFDEVFQHANFNTFVFRNRVKLETYNDESRIKVTVVDAKPVDHREYSKRLIINIRK 597
>gi|134110990|ref|XP_775959.1| hypothetical protein CNBD3660 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258625|gb|EAL21312.1| hypothetical protein CNBD3660 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 612
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 219/645 (33%), Positives = 337/645 (52%), Gaps = 79/645 (12%)
Query: 23 LVQVMDIKLIGSTQ----ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
+VQV+++K I ST +RYR ++SD AMLATQLN V++ QV K S+V+++++
Sbjct: 26 VVQVLNVKKIASTDTTAVDRYRAILSDGQYFIQAMLATQLNHFVESKQVDKHSLVKVVNF 85
Query: 79 ICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAP 138
++V RK++++L +E + E IGNP ++
Sbjct: 86 SVNSVSGRKLLIILALEVVPWTDEKIGNPVSVDQA------------------------- 120
Query: 139 NSGTFNLQNSGTFNSQNPGSFSTP-NSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHG 197
++ + ++Q G+ S P S T AP + + +P P + G
Sbjct: 121 -------KSGASASAQPAGAHSAPLQSATAPAPARAQVPGRNASSARPGNTKPKG--DLG 171
Query: 198 PILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGE 257
P+ PI L+PYQ RW IKARVT K D+R Y+N RGDGK+F+ +D + GE
Sbjct: 172 PLY---------PIEGLSPYQNRWTIKARVTQKSDIRHYSNQRGDGKLFNVTFMD-ETGE 221
Query: 258 IRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEE 317
IR T FN VD FY ++EVG+V+ +S+ + A+K F+++ NE+EI E + ++ C
Sbjct: 222 IRATGFNDAVDNFYNLLEVGKVFFVSRARINIAKKQFSNVNNEYEIMFERDTEIEPCA-- 279
Query: 318 DDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDT 376
D+S+P+ +++F+ I ++ + + + DVIG+V V + R +R L L D
Sbjct: 280 DESVPQVKYNFKGIGDLGELQKDDVCDVIGVVREVGELGSVTSRATNKPFAKRELQLVDQ 339
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP 436
SG+SV LTLWG K E PV++ K KV DF G+S+ + + INP
Sbjct: 340 SGQSVRLTLWG--------KQAETFQADDQPVIAFKGVKVGDFGGRSLSMFSNATMTINP 391
Query: 437 DFAEAHELREWFDSGGKNA-----ATVSISRE---IAAGGAKNEIH-KTVSQIKNEGLGR 487
D EAH LR WFD+ G N T S+ AAG A KT++Q+K+E LG
Sbjct: 392 DIPEAHSLRGWFDAEGHNKHFTAYTTASVGDSAINTAAGAATRPAELKTIAQVKDEQLGM 451
Query: 488 SEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDY 547
SEK D+ + A + FIK D F Y AC C KKV + G+ W C++C + DE +
Sbjct: 452 SEKTDFFSTEATVAFIKKDPFSYPACA---NPDNCAKKVVEDGSGWWCEKCQRRWDEPIH 508
Query: 548 RYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQD---DVRFGEIIRSRVF 604
RY+L + D TG W+TAF E+ E+I+G A +L LK E D DV F +
Sbjct: 509 RYILSMNVMDYTGQFWMTAFNETAEQIMGISANDLMKLKNEGNDLDYDVHFAKATA---- 564
Query: 605 NQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
Y+F++ K++ + D+ RV+ + +Y ++S +L +IS+
Sbjct: 565 RTYVFQMMAKQDSFNDQVRVRYQCRKVAPPDYVADSAHLSQMISQ 609
>gi|4506583|ref|NP_002936.1| replication protein A 70 kDa DNA-binding subunit [Homo sapiens]
gi|1350579|sp|P27694.2|RFA1_HUMAN RecName: Full=Replication protein A 70 kDa DNA-binding subunit;
Short=RP-A p70; AltName: Full=Replication factor A
protein 1; Short=RF-A protein 1; AltName:
Full=Single-stranded DNA-binding protein
gi|337489|gb|AAA36584.1| replication protein A, 70-kDa subunit [Homo sapiens]
gi|17390283|gb|AAH18126.1| Replication protein A1, 70kDa [Homo sapiens]
gi|46430939|gb|AAS94324.1| replication protein A1, 70kDa [Homo sapiens]
gi|119610980|gb|EAW90574.1| replication protein A1, 70kDa [Homo sapiens]
gi|158260431|dbj|BAF82393.1| unnamed protein product [Homo sapiens]
gi|313883656|gb|ADR83314.1| replication protein A1, 70kDa [synthetic construct]
Length = 616
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 227/651 (34%), Positives = 360/651 (55%), Gaps = 60/651 (9%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD N KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ Q+
Sbjct: 12 AIMQKGDTNIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEEQL 71
Query: 68 KKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNL 126
V Q+ +I +T+++ R++++++ +E ++ E +G
Sbjct: 72 SSNCVCQIHRFIVNTLKDGRRVVILMELE-VLKSAEAVG--------------------- 109
Query: 127 PQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPP 186
V++ N N G Q + + +P + S P P GS TV
Sbjct: 110 ---VKIGNPVPYNEGLGQPQVAPPAPAASPAASSRPQ------PQNGS--SGMGSTVSKA 158
Query: 187 YQPPPNF-RNHGPILKNEA---PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGD 242
Y F + GP L + + ++++PIA+L PYQ +W I ARVT K +R ++N+RG+
Sbjct: 159 YGASKTFGKAAGPSLSHTSGGTQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGE 218
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE 302
GK+FS +L+D + GEIR T FN VD+F+ +IEV +VY SKG+LK A K F +KN++E
Sbjct: 219 GKLFSLELVD-ESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYE 277
Query: 303 IFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRK 361
+ ++V C E+D +P QF F I ++E+ +S+VD+IGI S + I +R
Sbjct: 278 MTFNNETSVMPC-EDDHHLPTVQFDFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRS 336
Query: 362 NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG 421
N E +R + L DTSG+ V TLWG+ +K Q PVL++K +V+DF G
Sbjct: 337 NNREVAKRNIYLMDTSGKVVTATLWGEDADKFDGSRQ--------PVLAIKGARVSDFGG 388
Query: 422 KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQI 480
+S+ + S+ + NPD EA++LR WFD+ G+ VSIS + G G N KT+ ++
Sbjct: 389 RSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQALDGVSISDLKSGGVGGSNTNWKTLYEV 448
Query: 481 KNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCN 539
K+E LG+ +KPD+ + A + +++ ++ Y ACP + CNKKV Q ++C++C+
Sbjct: 449 KSENLGQGDKPDYFSSVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCD 504
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEII 599
E YR +L I D WVT FQES E ILG A L LK +++ F E+
Sbjct: 505 TEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELKD--KNEQAFEEVF 562
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
++ F ++FR+++K E Y DE R+K TV+ V+Y R L+ I +S
Sbjct: 563 QNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVMSIRRS 613
>gi|348567597|ref|XP_003469585.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cavia porcellus]
Length = 603
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 221/641 (34%), Positives = 355/641 (55%), Gaps = 62/641 (9%)
Query: 16 GDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQVKKGSV 72
GD + KP++QV+ I+ I G+ RYR L+SD ++T + MLATQ+N V+ Q+ +
Sbjct: 4 GDTSIKPILQVISIRPITTGNNPPRYRLLMSDGINTLSSFMLATQMNSLVEQEQLAANCI 63
Query: 73 VQLIDYICSTVQNRKIIVVLNMETIILDCE-----PIGNPKIFSESELTAQKTIPSNNLP 127
Q+ +I +T+++ + +V+L ME +L IGNP ++E + Q +P
Sbjct: 64 CQIDRFIVNTLKDGRRVVIL-MELKVLKSADMVGVKIGNPLPYNEGQGQPQA------VP 116
Query: 128 QPVRVNNYSAPNSGTFNLQN-SGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPP 186
PV S+P +G QN S S P ++ S TF P ++ T
Sbjct: 117 SPVTA---SSPLTGRPQQQNGSSGVGSSVPKAYGA--SKTFGKPGGSGLLHPSGGT---- 167
Query: 187 YQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVF 246
++++PI +L PYQ +W I+ARVT K +R ++N+RG+GK+F
Sbjct: 168 ------------------QSKVVPIVSLTPYQSKWTIRARVTNKSQIRTWSNSRGEGKLF 209
Query: 247 SFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLE 306
S +L+D + GEIR FN VD+F+ +IEV +VY SKGSLK A K F+ +KN++E+
Sbjct: 210 SLELVD-ESGEIRAAAFNEQVDKFFPLIEVNKVYYFSKGSLKIANKQFSAVKNDYEMTFN 268
Query: 307 ATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGME 365
+ ++V C E+D +P QF F I ++E+ +S+VD+IGI S + I ++ N E
Sbjct: 269 SETSVVPC-EDDHHLPTVQFDFTGIDDLENKSKDSLVDIIGICKSYEDATKITVKSNNRE 327
Query: 366 TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIG 425
+R + L DTSG+ V TLWG+ +K Q PV+++K +V+DF G+S+
Sbjct: 328 VAKRNIYLMDTSGKVVTATLWGEDADKFDGSRQ--------PVIAIKGARVSDFGGRSLS 379
Query: 426 TIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISR-EIAAGGAKNEIHKTVSQIKNEG 484
+ S+ + +NPD EA++LR WFD+ G+ VSIS + A G N KT+ ++K+E
Sbjct: 380 VLSSSTIIMNPDIPEAYKLRGWFDTEGQTLDGVSISDLKGGALGTSNTNWKTLYEVKSEN 439
Query: 485 LGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEID 543
LG+ +K D+ + A + +++ ++ Y ACP ++CNKKV Q ++C++C++E
Sbjct: 440 LGQGDKADYFSSVATVVYLRKENCMYQACPT----QECNKKVIDQQNGLYRCEKCDREFP 495
Query: 544 ECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRV 603
YR +L A I D WVT FQES E ILG Y+ + + +++ F E+ ++
Sbjct: 496 NFKYRMILSANIADFQENQWVTCFQESAEAILG--QNTAYLGELKDKNEQAFEEVFQNAN 553
Query: 604 FNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
F + F++++K E Y DE RVK TV+ V+Y R L+
Sbjct: 554 FRSFTFKIRVKLETYNDESRVKATVMDVKPVDYRDYGRRLI 594
>gi|380815388|gb|AFE79568.1| replication protein A 70 kDa DNA-binding subunit [Macaca mulatta]
gi|383420567|gb|AFH33497.1| replication protein A 70 kDa DNA-binding subunit [Macaca mulatta]
gi|384943584|gb|AFI35397.1| replication protein A 70 kDa DNA-binding subunit [Macaca mulatta]
Length = 616
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 226/651 (34%), Positives = 363/651 (55%), Gaps = 60/651 (9%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD + KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ ++
Sbjct: 12 AIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEQERL 71
Query: 68 KKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNL 126
+ Q+ +I +T+++ R++++++ +E ++ E +G
Sbjct: 72 SSNCICQIHRFIVNTLKDGRRVVILMELE-VLKSAEAVG--------------------- 109
Query: 127 PQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPP 186
V++ N N G Q + ++ +P + S P + AGS TV
Sbjct: 110 ---VKIGNPVPYNEGHGQPQAAPPASAGSPAASSKPQQ-QHGSSGAGS-------TVSKA 158
Query: 187 YQPPPNF-RNHGPILKNEA---PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGD 242
Y F + GP L N + ++++PIA+L PYQ +W I ARVT K +R ++N+RG+
Sbjct: 159 YGASKTFGKAGGPSLSNTSGGTQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGE 218
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE 302
GK+FS +L+D + GEIR T FN VD+F+ +IEV +VY SKG+LK A K F +KN++E
Sbjct: 219 GKLFSLELVD-ESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYE 277
Query: 303 IFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRK 361
+ ++V C E+D +P QF F I ++ES +S+VD+IGI S + I +R
Sbjct: 278 MTFNNETSVMPC-EDDRHLPTVQFDFTGIDDLESKSKDSLVDIIGICKSYEDATKITVRS 336
Query: 362 NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG 421
N E +R + L DTSG+ V TLWG+ +K Q PVL++K +V+DF G
Sbjct: 337 NNREVAKRNIYLMDTSGKVVTATLWGEDADKFDGSRQ--------PVLAIKGARVSDFGG 388
Query: 422 KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQI 480
+S+ + S+ + +NPD EA++LR WFD+ G+ VSIS + G G N KT+ ++
Sbjct: 389 RSLSVLSSSTIIVNPDIPEAYKLRGWFDAEGQALDGVSISDLKSGGVGGGNTNWKTLYEV 448
Query: 481 KNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCN 539
K+E LG+ +KPD+ + A + +++ ++ Y ACP + CNKKV Q ++C++C+
Sbjct: 449 KSENLGQGDKPDYFSSVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCD 504
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEII 599
E YR +L I D WVT FQES E ILG A L LK +++ F E+
Sbjct: 505 TEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELKD--KNEQAFEEVF 562
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
++ F ++FR+++K E Y DE R+K TV+ V+Y R L+ I +S
Sbjct: 563 QNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVLSIRRS 613
>gi|402898208|ref|XP_003912118.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Papio
anubis]
Length = 616
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 227/651 (34%), Positives = 362/651 (55%), Gaps = 60/651 (9%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD + KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ ++
Sbjct: 12 AIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEQERL 71
Query: 68 KKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNL 126
V Q+ +I +T+++ R++++++ +E ++ E +G
Sbjct: 72 SSNCVCQIHRFIVNTLKDGRRVVILMELE-VLKSAEAVG--------------------- 109
Query: 127 PQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPP 186
V++ N N G Q + ++ +P + S P + AGS TV
Sbjct: 110 ---VKIGNPVPYNEGHGQPQAAPPASAGSPAASSKPQQ-QHGSSGAGS-------TVSKA 158
Query: 187 YQPPPNF-RNHGPILKNEA---PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGD 242
Y F + GP L N + ++++PIA+L PYQ +W I ARVT K +R ++N+RG+
Sbjct: 159 YGASKTFGKAGGPSLSNTSGGTQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGE 218
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE 302
GK+FS +L+D + GEIR T FN VD+F+ +IEV +VY SKG+LK A K F +KN++E
Sbjct: 219 GKLFSLELVD-ESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYE 277
Query: 303 IFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRK 361
+ ++V C E+D +P QF F I ++ES +S+VD+IGI S + I +R
Sbjct: 278 MTFNNETSVMPC-EDDRHLPTVQFDFTGIDDLESKSKDSLVDIIGICKSYEDATKITVRS 336
Query: 362 NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG 421
N E +R + L DTSG+ V TLWG+ +K Q PVL++K +V+DF G
Sbjct: 337 NNREVAKRNIYLMDTSGKVVTATLWGEDADKFDGSRQ--------PVLAIKGARVSDFGG 388
Query: 422 KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQI 480
+S+ + S+ + NPD EA++LR WFD+ G+ VSIS + G G N KT+ ++
Sbjct: 389 RSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQALDGVSISDLKSGGVGGGNTNWKTLYEV 448
Query: 481 KNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCN 539
K+E LG+ +KPD+ + A + +++ ++ Y ACP + CNKKV Q ++C++C+
Sbjct: 449 KSENLGQGDKPDYFSSVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCD 504
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEII 599
E YR +L I D WVT FQES E ILG A L LK +++ F E+
Sbjct: 505 TEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELKD--KNEQAFEEVF 562
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
++ F ++FR+++K E Y DE R+K TV+ V+Y R L+ I +S
Sbjct: 563 QNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVLSIRRS 613
>gi|348540235|ref|XP_003457593.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Oreochromis niloticus]
Length = 665
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 233/692 (33%), Positives = 368/692 (53%), Gaps = 67/692 (9%)
Query: 1 MPVNLTPNSI-SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHAM---- 53
M V LT ++ +L G DV+ KP++Q+++I+ I S R+R ++SD QH++
Sbjct: 1 MNVPLTKGAVEALCKGLDVD-KPVLQLLNIRQISNASGPPRFRLMMSDG---QHSLTSCL 56
Query: 54 LATQLNDRVKTGQVKKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCEP---IGNP-- 107
LATQLN + V L + +T+ + R+++VV++M+ + E IGNP
Sbjct: 57 LATQLNYLSDENLLVPNCVCLLKKTVNNTLADGRRVVVVMDMDILKSAEEAGGKIGNPTP 116
Query: 108 -----KIFSESELTAQKTIP----SNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGS 158
K+ S ++++ +P S +P P N +S G G+F Q P
Sbjct: 117 YNTDGKMSSPQKVSSSTYVPESPPSAAVPGPSYRNYFSPRGRG-------GSFTGQAPMK 169
Query: 159 FSTPNSGTFRAPNAGSIVRSFQPTVQPPYQ-------PPPNFR------NHGPILKNEAP 205
S + +A + P P + P P+ N A
Sbjct: 170 ASPMKASPMKASPMKASPMKASPMKASPMKASAIKASPSKGLTVKVSPMKASPMKANSAS 229
Query: 206 ----ARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVT 261
A++IPIA+LNPYQ +W I+ARVT K +R ++N+RG+GK+FSF+++D + GEIR+T
Sbjct: 230 PGSSAKVIPIASLNPYQSKWTIRARVTNKSSIRTWSNSRGEGKLFSFEIVD-ESGEIRIT 288
Query: 262 CFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSI 321
FN VD+F+ ++E G+VY ISK +LKPA K + LKN++E+ L A S++ C +++ SI
Sbjct: 289 AFNKEVDKFFSLVEQGKVYYISKATLKPANKQYTTLKNDYEMTLHAHSSIVPC-DDNQSI 347
Query: 322 PKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSV 381
P F I+E+E+ + ++I+DVIGI S I KN E +R L++ D +G+ V
Sbjct: 348 PTVHCDFVPIAELENRDKDAIIDVIGICKSAEDVSRITTKNSREVSKRALSIIDQTGKVV 407
Query: 382 ELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEA 441
+TLWG+ E D PV+++K +++DF G+S+ + S+ + +NPD +A
Sbjct: 408 TVTLWGEEA--------ENFDGSTQPVVAIKGARLSDFGGRSLSALFSSTVMVNPDIPQA 459
Query: 442 HELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFIT 501
LR W+D G + S++ +AG N KT+S IKNE +G EK + + A +
Sbjct: 460 FRLRAWYDREGFAINSQSLTETRSAGTGLNVNWKTLSDIKNEDMGHGEKAQYFSCVATVL 519
Query: 502 FIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTG 560
+I+ ++ Y ACP CNKKV Q ++C++CN+E YR LL A + D
Sbjct: 520 YIRKENCLYQACP----SADCNKKVIDQQNGLYRCEKCNREFPNFKYRLLLSANLADFGD 575
Query: 561 LTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGD 620
WVT FQE+ E +LG A+ L L+ D+ F E+ + F ++F+ ++K E Y D
Sbjct: 576 NQWVTCFQETAEALLGHSAETLGHLRD--TDEAAFDEVFQKANFTTHIFKNRVKLETYND 633
Query: 621 EQRVKITVIRADQVNYSSESRYLLDLISKSFR 652
E RVK+TV+ V++ SR LL I K R
Sbjct: 634 ESRVKVTVMEVQPVDHREYSRRLLQNIYKLAR 665
>gi|397491957|ref|XP_003816902.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Pan
paniscus]
Length = 616
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 227/651 (34%), Positives = 359/651 (55%), Gaps = 60/651 (9%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ Q+
Sbjct: 12 AIMQKGDTTIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEEQL 71
Query: 68 KKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNL 126
V Q+ +I +T+++ R++++++ +E ++ E +G
Sbjct: 72 SSNCVCQIHRFIVNTLKDGRRVVILMELE-VLKSAEAVG--------------------- 109
Query: 127 PQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPP 186
V++ N N G Q + + +P + S P P GS TV
Sbjct: 110 ---VKIGNPVPYNEGLGQPQVAPPAPAASPAASSRPQ------PQNGS--SGVGSTVSKA 158
Query: 187 YQPPPNF-RNHGPILKNEA---PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGD 242
Y F + GP L + + ++++PIA+L PYQ +W I ARVT K +R ++N+RG+
Sbjct: 159 YGASKTFGKATGPSLSHTSGGTQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGE 218
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE 302
GK+FS +L+D + GEIR T FN VD+F+ +IEV +VY SKG+LK A K F +KN++E
Sbjct: 219 GKLFSLELVD-ESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYE 277
Query: 303 IFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRK 361
+ ++V C E+D +P QF F I ++E+ +S+VD+IGI S + I +R
Sbjct: 278 MTFNNETSVMPC-EDDRHLPTVQFDFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRS 336
Query: 362 NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG 421
N E +R + L DTSG+ V TLWG+ +K Q PVL++K +V+DF G
Sbjct: 337 NNREVAKRNIYLMDTSGKVVTATLWGEDADKFDGSRQ--------PVLAIKGARVSDFGG 388
Query: 422 KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQI 480
+S+ + S+ + NPD EA++LR WFDS G+ VSIS + G G N KT+ ++
Sbjct: 389 RSLSVLSSSTIIANPDIPEAYKLRGWFDSEGQALDGVSISDLKSGGVGGSNTNWKTLYEV 448
Query: 481 KNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCN 539
K+E LG+ +KPD+ + A + +++ ++ Y ACP + CNKKV Q ++C++C+
Sbjct: 449 KSENLGQGDKPDYFSSVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCD 504
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEII 599
E YR +L I D WVT FQES E ILG A L LK +++ F E+
Sbjct: 505 TEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGHNAAYLGELKD--KNEQAFEEVF 562
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
++ F ++FR+++K E Y DE R+K TV+ V+Y R L+ I +S
Sbjct: 563 QNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVMSIRRS 613
>gi|168277810|dbj|BAG10883.1| replication protein A 70 kDa DNA-binding subunit [synthetic
construct]
Length = 616
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 226/651 (34%), Positives = 359/651 (55%), Gaps = 60/651 (9%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD N KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ Q+
Sbjct: 12 AIMQKGDTNIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEEQL 71
Query: 68 KKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNL 126
V Q+ +I +T+++ R++++++ +E ++ E +G
Sbjct: 72 SSNCVCQIHRFIVNTLKDGRRVVILMELE-VLKSAEAVG--------------------- 109
Query: 127 PQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPP 186
V++ N N G Q + + +P + S P P GS TV
Sbjct: 110 ---VKIGNPVPYNEGLGQPQVAPPAPAASPAASSRPQ------PQNGS--SGMGSTVSKA 158
Query: 187 YQPPPNF-RNHGPILKNEA---PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGD 242
Y F + GP L + + ++++PIA+L PYQ +W I ARVT K +R ++N+RG+
Sbjct: 159 YGASKTFGKAAGPSLSHTSGGTQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGE 218
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE 302
GK+FS +L+D + GEIR T FN VD+F+ +IEV +VY SKG+LK A K F +KN++E
Sbjct: 219 GKLFSLELVD-ESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYE 277
Query: 303 IFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRK 361
+ ++V C E+D +P QF F I ++E+ +S+VD+IGI S + I +R
Sbjct: 278 MTFNNETSVMPC-EDDHHLPTVQFDFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRS 336
Query: 362 NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG 421
N E +R + L D SG+ V TLWG+ +K Q PVL++K +V+DF G
Sbjct: 337 NNREVAKRNIYLMDASGKVVTATLWGEDADKFDGSRQ--------PVLAIKGARVSDFGG 388
Query: 422 KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQI 480
+S+ + S+ + NPD EA++LR WFD+ G+ VSIS + G G N KT+ ++
Sbjct: 389 RSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQALDGVSISDLKSGGVGGSNTNWKTLYEV 448
Query: 481 KNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCN 539
K+E LG+ +KPD+ + A + +++ ++ Y ACP + CNKKV Q ++C++C+
Sbjct: 449 KSENLGQGDKPDYFSSVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCD 504
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEII 599
E YR +L I D WVT FQES E ILG A L LK +++ F E+
Sbjct: 505 TEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELKD--KNEQAFEEVF 562
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
++ F ++FR+++K E Y DE R+K TV+ V+Y R L+ I +S
Sbjct: 563 QNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVMSIRRS 613
>gi|321257561|ref|XP_003193631.1| damaged DNA binding protein [Cryptococcus gattii WM276]
gi|317460101|gb|ADV21844.1| Damaged DNA binding protein, putative [Cryptococcus gattii WM276]
Length = 598
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 219/640 (34%), Positives = 335/640 (52%), Gaps = 83/640 (12%)
Query: 23 LVQVMDIKLIGSTQ----ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
+VQV+++K I ST +RYR ++SD AMLATQLN V++ QV K S+V+++++
Sbjct: 26 VVQVLNVKKIASTDTTAVDRYRAILSDGQYFIQAMLATQLNHFVESKQVDKHSLVKVVNF 85
Query: 79 ICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAP 138
++V RK++++L +E + E IGNP +++ A + QP N SAP
Sbjct: 86 SVNSVSGRKLLIILALEVVPWTDEKIGNPVSVDQAKTGASAS------AQPAGAN--SAP 137
Query: 139 NSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGP 198
+ + S P S +AP + P+ + P + GP
Sbjct: 138 HQ----------------SATSAPASARGQAPARNA------PSARSGNTKPKG--DLGP 173
Query: 199 ILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEI 258
+ PI L+PYQ RW IKARVT K D+R Y+N RGDGK+F+ +D + GEI
Sbjct: 174 LY---------PIEGLSPYQNRWTIKARVTQKSDIRHYSNQRGDGKLFNVTFMD-ETGEI 223
Query: 259 RVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEED 318
R T FN VD FY ++EVG+V+ +S+ + A+K F+++ NE+EI E + ++ C D
Sbjct: 224 RATGFNDAVDNFYNLLEVGKVFFVSRARINIAKKQFSNVNNEYEIMFERDTEIEPCA--D 281
Query: 319 DSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSG 378
+S+P+ ++SF+ I ++ + + + DVIG+V E +R L L D SG
Sbjct: 282 ESVPQVKYSFKGIGDLGELQKDDVCDVIGVV--------------REFAKRDLQLVDQSG 327
Query: 379 RSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDF 438
+SV LTLWG K E PV++ K KV DF G+S+ + + INPD
Sbjct: 328 QSVRLTLWG--------KQAETFQADDQPVIAFKGVKVGDFGGRSLSMFSNATMTINPDI 379
Query: 439 AEAHELREWFDSGGKNA-------ATV--SISREIAAGGAKNEIHKTVSQIKNEGLGRSE 489
EAH LR WFD+ G N A+V S A G + KT++Q K+E LG SE
Sbjct: 380 PEAHSLRGWFDAEGHNKHFTAYTNASVGDSAVNTAAGAGTRPAELKTIAQAKDEQLGMSE 439
Query: 490 KPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRY 549
K D+ + A + FIK D F Y AC C KKV + G+ W C++C + DE +RY
Sbjct: 440 KTDFFSTEATVAFIKKDPFSYPACA---NPDNCAKKVVEDGSGWWCEKCQRRWDEPIHRY 496
Query: 550 LLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLF 609
+L + D TG W+TAF E+ E+I+ A +L LK E +D+ + Y+F
Sbjct: 497 ILSLNVMDYTGQFWMTAFNETAEQIMSISANDLMKLKNE-GNDLDYDAHFAKATARTYVF 555
Query: 610 RLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
++ K++ + D+ RV+ + +Y ++S YL +IS+
Sbjct: 556 QMMAKQDSFNDQVRVRYQCRKVATPDYVADSAYLSQMISQ 595
>gi|62089044|dbj|BAD92969.1| replication protein A1, 70kDa variant [Homo sapiens]
Length = 630
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 226/651 (34%), Positives = 359/651 (55%), Gaps = 60/651 (9%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD N KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ Q+
Sbjct: 26 AIMQKGDTNIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEEQL 85
Query: 68 KKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNL 126
V Q+ +I +T+++ R++++++ +E ++ E +G
Sbjct: 86 SSNCVCQIHRFIVNTLKDGRRVVILMELE-VLKSAEAVG--------------------- 123
Query: 127 PQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPP 186
V++ N N G Q + + +P + S P P GS TV
Sbjct: 124 ---VKIGNPVPYNEGLGQPQVAPPAPAASPAASSRPQ------PQNGS--SGMGSTVSKA 172
Query: 187 YQPPPNF-RNHGPILKNEA---PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGD 242
Y F + GP L + + ++++PIA+L PYQ +W I ARVT K +R ++N+RG+
Sbjct: 173 YGASKTFGKAAGPSLSHTSGGTQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGE 232
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE 302
GK+FS +L+D + GEIR T FN VD+F+ +IEV +VY SKG+LK A K F +KN++E
Sbjct: 233 GKLFSLELVD-ESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYE 291
Query: 303 IFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRK 361
+ ++V C E+D +P QF F I ++E+ +S+VD+IGI S + I +R
Sbjct: 292 MTFNNETSVMPC-EDDHHLPTVQFDFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRS 350
Query: 362 NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG 421
N E +R + L D SG+ V TLWG+ +K Q PVL++K +V+DF G
Sbjct: 351 NNREVAKRNIYLMDASGKVVTATLWGEDADKFDGSRQ--------PVLAIKGARVSDFGG 402
Query: 422 KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQI 480
+S+ + S+ + NPD EA++LR WFD+ G+ VSIS + G G N KT+ ++
Sbjct: 403 RSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQALDGVSISDLKSGGVGGSNTNWKTLYEV 462
Query: 481 KNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCN 539
K+E LG+ +KPD+ + A + +++ ++ Y ACP + CNKKV Q ++C++C+
Sbjct: 463 KSENLGQGDKPDYFSSVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCD 518
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEII 599
E YR +L I D WVT FQES E ILG A L LK +++ F E+
Sbjct: 519 TEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELKD--KNEQAFEEVF 576
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
++ F ++FR+++K E Y DE R+K TV+ V+Y R L+ I +S
Sbjct: 577 QNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVMSIRRS 627
>gi|387539408|gb|AFJ70331.1| replication protein A 70 kDa DNA-binding subunit [Macaca mulatta]
Length = 616
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 226/651 (34%), Positives = 362/651 (55%), Gaps = 60/651 (9%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD + KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ ++
Sbjct: 12 AIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEQERL 71
Query: 68 KKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNL 126
+ Q+ +I +T+++ R++++++ +E ++ E +G
Sbjct: 72 SSNCICQIHRFIVNTLKDGRRVVILMELE-VLKSAEAVG--------------------- 109
Query: 127 PQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPP 186
V++ N N G Q + ++ +P + S P + AGS TV
Sbjct: 110 ---VKIGNPVPYNEGHGQPQAAPPASAGSPAASSKPQQ-QHGSSGAGS-------TVSKA 158
Query: 187 YQPPPNF-RNHGPILKNEA---PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGD 242
Y F + GP L N + ++++PIA+L PYQ +W I ARVT K +R ++N+RG+
Sbjct: 159 YGASKTFGKAGGPSLSNTSGGTQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGE 218
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE 302
GK+FS +L+D + GEIR T FN VD+F+ +IEV +VY SKG+LK A K F +KN++E
Sbjct: 219 GKLFSLELVD-ESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYE 277
Query: 303 IFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRK 361
+ ++V C E+D +P QF F I ++ES +S+VD+IGI S + I +R
Sbjct: 278 MTFNNETSVMPC-EDDRHLPTVQFDFTGIDDLESKSKDSLVDIIGICKSYEDATKITVRS 336
Query: 362 NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG 421
N E +R + L DTSG+ V TLWG+ +K Q PVL++K +V+DF G
Sbjct: 337 NNREVAKRNIYLMDTSGKVVTATLWGEDADKFDGSRQ--------PVLAIKGARVSDFGG 388
Query: 422 KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQI 480
+S+ + S+ + NPD EA++LR WFD+ G+ VSIS + G G N KT+ ++
Sbjct: 389 RSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQALDGVSISDLKSGGVGGGNTNWKTLYEV 448
Query: 481 KNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCN 539
K+E LG+ +KPD+ + A + +++ ++ Y ACP + CNKKV Q ++C++C+
Sbjct: 449 KSENLGQGDKPDYFSSVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCD 504
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEII 599
E YR +L I D WVT FQES E ILG A L LK +++ F E+
Sbjct: 505 TEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELKD--KNEQAFEEVF 562
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
++ F ++FR+++K E Y DE R+K TV+ V+Y R L+ I +S
Sbjct: 563 QNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVLSIRRS 613
>gi|58266158|ref|XP_570235.1| damaged DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57226468|gb|AAW42928.1| damaged DNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 597
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 221/644 (34%), Positives = 335/644 (52%), Gaps = 92/644 (14%)
Query: 23 LVQVMDIKLIGSTQ----ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
+VQV+++K I ST +RYR ++SD AMLATQLN V++ QV K S+V+++++
Sbjct: 26 VVQVLNVKKIASTDTTAVDRYRAILSDGQYFIQAMLATQLNHFVESKQVDKHSLVKVVNF 85
Query: 79 ICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAP 138
++V RK++++L +E + E IGNP V V+ +
Sbjct: 86 SVNSVSGRKLLIILALEVVPWTDEKIGNP----------------------VSVDQAKSG 123
Query: 139 NSGTFNLQNSGTFNSQNPGSFSTP-NSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHG 197
S + +Q G+ S P S T AP + + +P P + G
Sbjct: 124 ASAS----------AQPAGAHSAPLQSATAPAPARAQVPGRNASSARPGNTKPKG--DLG 171
Query: 198 PILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGE 257
P+ PI L+PYQ RW IKARVT K D+R Y+N RGDGK+F+ +D + GE
Sbjct: 172 PLY---------PIEGLSPYQNRWTIKARVTQKSDIRHYSNQRGDGKLFNVTFMD-ETGE 221
Query: 258 IRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEE 317
IR T FN VD FY ++EVG+V+ +S+ + A+K F+++ NE+EI E + ++ C
Sbjct: 222 IRATGFNDAVDNFYNLLEVGKVFFVSRARINIAKKQFSNVNNEYEIMFERDTEIEPCA-- 279
Query: 318 DDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTS 377
D+S+P+ +++F+ I ++ + + + DVIG+V E +R L L D S
Sbjct: 280 DESVPQVKYNFKGIGDLGELQKDDVCDVIGVV--------------REFAKRELQLVDQS 325
Query: 378 GRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPD 437
G+SV LTLWG K E PV++ K KV DF G+S+ + + INPD
Sbjct: 326 GQSVRLTLWG--------KQAETFQADDQPVIAFKGVKVGDFGGRSLSMFSNATMTINPD 377
Query: 438 FAEAHELREWFDSGGKNA-----ATVSISRE---IAAGGAKNEIH-KTVSQIKNEGLGRS 488
EAH LR WFD+ G N T S+ AAG A KT++Q+K+E LG S
Sbjct: 378 IPEAHSLRGWFDAEGHNKHFTAYTTASVGDSAINTAAGAATRPAELKTIAQVKDEQLGMS 437
Query: 489 EKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYR 548
EK D+ + A + FIK D F Y AC C KKV + G+ W C++C + DE +R
Sbjct: 438 EKTDFFSTEATVAFIKKDPFSYPACA---NPDNCAKKVVEDGSGWWCEKCQRRWDEPIHR 494
Query: 549 YLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQD---DVRFGEIIRSRVFN 605
Y+L + D TG W+TAF E+ E+I+G A +L LK E D DV F +
Sbjct: 495 YILSMNVMDYTGQFWMTAFNETAEQIMGISANDLMKLKNEGNDLDYDVHFAKATA----R 550
Query: 606 QYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
Y+F++ K++ + D+ RV+ + +Y ++S +L +IS+
Sbjct: 551 TYVFQMMAKQDSFNDQVRVRYQCRKVAPPDYVADSAHLSQMISQ 594
>gi|71022145|ref|XP_761303.1| hypothetical protein UM05156.1 [Ustilago maydis 521]
gi|46097797|gb|EAK83030.1| hypothetical protein UM05156.1 [Ustilago maydis 521]
Length = 623
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 215/644 (33%), Positives = 334/644 (51%), Gaps = 70/644 (10%)
Query: 22 PLVQVMDIKLIGSTQ-------ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQ 74
P+ Q++ IK I ++ +RYR ++SD ++ AMLA+Q V++G+++K +V+
Sbjct: 28 PVCQILSIKKIQASATSAANVGDRYRIILSDGINYAQAMLASQKRSMVESGELEKNCLVR 87
Query: 75 LIDYICSTVQNRKIIVVLNMETIILDCEP-IGNPKIFSESELTAQKTIPSNNLPQPVRVN 133
+ + ++VQNR+I+++L+++ + E +G+P N+ + V+
Sbjct: 88 VTQFASNSVQNRRILILLDLDVVHKPTEDRLGHP----------------TNVEEAVKAE 131
Query: 134 NYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNF 193
G L NS N N +TP + G
Sbjct: 132 GGVKQEGGANALGNSALGN--NSAGRTTPATSAMGKAAGG-------------------- 169
Query: 194 RNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDS 253
R G + P I PI L+PYQ RW IKARVT+K D+R ++N RG+GK+FS +LLD
Sbjct: 170 RPGGGSVHAGMP--IYPIEGLSPYQNRWTIKARVTSKSDIRHWSNQRGEGKLFSVNLLD- 226
Query: 254 DGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDL 313
D GEI+ T FN VDRFY +++ VYLISK + A+K F++L+NE+EI E ++ ++
Sbjct: 227 DSGEIKATGFNDAVDRFYPLLQENHVYLISKARVNIAKKQFSNLQNEYEITFENSTEIEE 286
Query: 314 CTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILN 372
CT+ D +P+ ++ F I+E+ES E N DVIGI+ S I+ K Q+R L
Sbjct: 287 CTDATD-VPEVKYEFVRINELESVEANQTCDVIGILDSYGELSEIVSKASQRPVQKRELT 345
Query: 373 LKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQL 432
L D RSV+LTLWG K + V PVL+ K KV DF G+S+ S+ +
Sbjct: 346 LVDQGNRSVKLTLWG----KTAETFPTNAGVDEKPVLAFKGVKVGDFGGRSLSMFSSSTM 401
Query: 433 FINPDFAEAHELREWFDSGGKNA--------ATVSISREIAAGGAKNEIHKTVSQIKNEG 484
INPD E+H LR W+D+ G +A + GA +T+ Q+K+E
Sbjct: 402 LINPDITESHVLRGWYDNDGAHAQFQPYTNGGVGGGAMGGGGAGANMAERRTIVQVKDEN 461
Query: 485 LGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEID 543
LG SEKPD+ VRA + +IK ++ YTAC CNKKV N W+C++C++
Sbjct: 462 LGMSEKPDYFNVRATVVYIKQENLYYTAC----ASEGCNKKVNLDHENNWRCEKCDRSYA 517
Query: 544 ECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRV 603
+YRY+L + D TG W++ F E +++G A EL+ L+ E + + F +
Sbjct: 518 TPEYRYILSTNVADATGQMWLSGFNEDATQLIGMSAGELHKLREESESE--FSAALHRAA 575
Query: 604 FNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
Y+F + K + + D RV+ T+ RA V+++ L+D I
Sbjct: 576 NRMYMFNCRAKMDTFNDTARVRYTISRAAPVDFAKAGMELVDAI 619
>gi|332846842|ref|XP_511254.3| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Pan
troglodytes]
gi|410218106|gb|JAA06272.1| replication protein A1, 70kDa [Pan troglodytes]
gi|410264556|gb|JAA20244.1| replication protein A1, 70kDa [Pan troglodytes]
gi|410300150|gb|JAA28675.1| replication protein A1, 70kDa [Pan troglodytes]
gi|410340247|gb|JAA39070.1| replication protein A1, 70kDa [Pan troglodytes]
Length = 616
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 226/651 (34%), Positives = 359/651 (55%), Gaps = 60/651 (9%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ Q+
Sbjct: 12 AIMQKGDTTIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEEQL 71
Query: 68 KKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNL 126
V Q+ +I +T+++ R++++++ +E ++ E +G
Sbjct: 72 SSNCVCQIHRFIVNTLKDGRRVVILMELE-VLKSAEAVG--------------------- 109
Query: 127 PQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPP 186
V++ N N G Q + + +P + S P P GS TV
Sbjct: 110 ---VKIGNPVPYNEGLGQPQVAPPAPAASPAASSRPQ------PQNGS--SGVGSTVSKA 158
Query: 187 YQPPPNF-RNHGPILKNEA---PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGD 242
Y F + GP L + + ++++PIA+L PYQ +W I ARVT K +R ++N+RG+
Sbjct: 159 YGASKTFGKAAGPSLSHTSGGTQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGE 218
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE 302
GK+FS +L+D + GEIR T FN VD+F+ +IEV +VY SKG+LK A K F +KN++E
Sbjct: 219 GKLFSLELVD-ESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYE 277
Query: 303 IFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRK 361
+ ++V C E+D +P QF F I ++E+ +S+VD+IGI S + I +R
Sbjct: 278 MTFNNETSVMPC-EDDRHLPTVQFDFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRS 336
Query: 362 NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG 421
N E +R + L DTSG+ V TLWG+ +K Q PVL++K +V+DF G
Sbjct: 337 NNREVAKRNIYLMDTSGKVVTATLWGEDADKFDGSRQ--------PVLAIKGARVSDFGG 388
Query: 422 KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQI 480
+S+ + S+ + NPD EA++LR WFD+ G+ VSIS + G G N KT+ ++
Sbjct: 389 RSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQALDGVSISDLKSGGVGGSNTNWKTLYEV 448
Query: 481 KNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCN 539
K+E LG+ +KPD+ + A + +++ ++ Y ACP + CNKKV Q ++C++C+
Sbjct: 449 KSENLGQGDKPDYFSSVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCD 504
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEII 599
E YR +L I D WVT FQES E ILG A L LK +++ F E+
Sbjct: 505 TEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELKD--KNEQAFEEVF 562
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
++ F ++FR+++K E Y DE R+K TV+ V+Y R L+ I +S
Sbjct: 563 QNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVMSIRRS 613
>gi|355568066|gb|EHH24347.1| Replication protein A 70 kDa DNA-binding subunit, partial [Macaca
mulatta]
Length = 605
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 226/651 (34%), Positives = 362/651 (55%), Gaps = 60/651 (9%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD + KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ ++
Sbjct: 1 AIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEQERL 60
Query: 68 KKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNL 126
+ Q+ +I +T+++ R++++++ +E ++ E +G
Sbjct: 61 SSNCICQIHRFIVNTLKDGRRVVILMELE-VLKSAEVVG--------------------- 98
Query: 127 PQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPP 186
V++ N N G Q + ++ +P + S P + AGS TV
Sbjct: 99 ---VKIGNPVPYNEGHGQPQAAPPASAGSPAASSKPQQ-QHGSSGAGS-------TVSKA 147
Query: 187 YQPPPNF-RNHGPILKNEA---PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGD 242
Y F + GP L N + ++++PIA+L PYQ +W I ARVT K +R ++N+RG+
Sbjct: 148 YGASKTFGKAGGPSLSNTSGGTQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGE 207
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE 302
GK+FS +L+D + GEIR T FN VD+F+ +IEV +VY SKG+LK A K F +KN++E
Sbjct: 208 GKLFSLELVD-ESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDFE 266
Query: 303 IFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRK 361
+ ++V C E+D +P QF F I ++ES +S+VD+IGI S + I +R
Sbjct: 267 MTFNNETSVMPC-EDDRHLPTVQFDFTGIDDLESKSKDSLVDIIGICKSYEDATKITVRS 325
Query: 362 NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG 421
N E +R + L DTSG+ V TLWG+ +K Q PVL++K +V+DF G
Sbjct: 326 NNREVAKRNIYLMDTSGKVVTATLWGEDADKFDGSRQ--------PVLAIKGARVSDFGG 377
Query: 422 KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQI 480
+S+ + S+ + NPD EA++LR WFD+ G+ VSIS + G G N KT+ ++
Sbjct: 378 RSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQALDGVSISDLKSGGVGGGNTNWKTLYEV 437
Query: 481 KNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCN 539
K+E LG+ +KPD+ + A + +++ ++ Y ACP + CNKKV Q ++C++C+
Sbjct: 438 KSENLGQGDKPDYFSSVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCD 493
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEII 599
E YR +L I D WVT FQES E ILG A L LK +++ F E+
Sbjct: 494 TEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELKD--KNEQAFEEVF 551
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
++ F ++FR+++K E Y DE R+K TV+ V+Y R L+ I +S
Sbjct: 552 QNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVLSIRRS 602
>gi|343428808|emb|CBQ72353.1| probable replication factor-A protein 1 [Sporisorium reilianum
SRZ2]
Length = 633
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 217/644 (33%), Positives = 334/644 (51%), Gaps = 59/644 (9%)
Query: 22 PLVQVMDIKLIGSTQ-------ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQ 74
P+ Q++ IK I +T +RYR ++SD V AMLA+Q V++G+++K ++
Sbjct: 27 PVCQILSIKKIQATAASASNVGDRYRIIVSDGVHYAQAMLASQKRSMVESGELEKNCFIR 86
Query: 75 LIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNN 134
+ Y ++VQNR+I+ I+LD E + P ++ L P V++
Sbjct: 87 VSQYASNSVQNRRIL-------ILLDLEVVHKPT--------------ADRLGNPTNVDD 125
Query: 135 YSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIV--RSFQPTVQPPYQPPPN 192
+ G + G+ + NS P+AG S + +
Sbjct: 126 FVKTEGA------RGVKHELGGGASALGNSALGNNPSAGRTTPATSAMGGAGAAAKVGAS 179
Query: 193 FRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLD 252
R G + P I PI L+PYQ RW IKARVT+K D+R ++NARGDGK+FS +LLD
Sbjct: 180 GRPGGSSVHAGMP--IYPIEGLSPYQNRWTIKARVTSKSDIRHWSNARGDGKLFSVNLLD 237
Query: 253 SDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVD 312
D GEI+ T FN VDRF+ +++ VYLISK + A+K F++L+NE+EI E ++ ++
Sbjct: 238 -DSGEIKATGFNDAVDRFHPLLQENHVYLISKARVNIAKKQFSNLQNEYEITFENSTEIE 296
Query: 313 LCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRIL 371
CT+ D +P+ ++ F I+E+ES E N DVIGI+ S I+ K Q+R L
Sbjct: 297 ECTDATD-VPEVKYEFVRINELESVEPNQTCDVIGILDSYGELSEIVSKASQRPVQKREL 355
Query: 372 NLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQ 431
L D RSV LTLWG K + V PV++ K KV DF G+S+ S+
Sbjct: 356 TLVDQGNRSVRLTLWG----KNAETFPNNAGVDEKPVIAFKGVKVGDFGGRSLSMFSSST 411
Query: 432 LFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEI-------HKTVSQIKNEG 484
+ INPD E+H LR WFD+ G +A + G +T+ Q+K+E
Sbjct: 412 MLINPDITESHVLRGWFDNDGAHAQFQPYTNAGVGGAGGAGGAGANLAERRTIVQVKDEN 471
Query: 485 LGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEID 543
LG SEKPD+ VRA + +IK ++ YTACP CNKKV+ N W+C++C++
Sbjct: 472 LGMSEKPDYFNVRATVVYIKQENLYYTACP----SDGCNKKVSLNHENNWRCEKCDRSYP 527
Query: 544 ECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRV 603
+ +YRY+L + D TG W++ F E +++G A EL+ L+ + + + F ++
Sbjct: 528 QPEYRYILSTNVADATGQIWLSGFNEDATKLIGMSAGELHQLREDSESE--FNAVLHRAA 585
Query: 604 FNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
Y F + K + + D RV+ T+ RA V ++ L++ I
Sbjct: 586 NRMYTFNCRAKMDTFNDTARVRYTISRAAPVEFAKAGAELVEAI 629
>gi|51512372|gb|AAU05383.1| replication protein A 70 kDa subunit [Ustilago maydis]
Length = 623
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 215/644 (33%), Positives = 334/644 (51%), Gaps = 70/644 (10%)
Query: 22 PLVQVMDIKLIGSTQ-------ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQ 74
P+ Q++ IK I ++ +RYR ++SD ++ AMLA+Q V++G+++K +V+
Sbjct: 28 PVCQILSIKKIQASATSAANVGDRYRIILSDGINYAQAMLASQKRSMVESGELEKNCLVR 87
Query: 75 LIDYICSTVQNRKIIVVLNMETIILDCEP-IGNPKIFSESELTAQKTIPSNNLPQPVRVN 133
+ + ++VQNR+I+++L+++ + E +G+P N+ + V+
Sbjct: 88 VTQFASNSVQNRRILILLDLDVVHKPTEDRLGHP----------------TNVEEAVKAE 131
Query: 134 NYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNF 193
G L NS N N +TP + G
Sbjct: 132 GGVKQEGGANALGNSALGN--NSAGRTTPATSAMGKAAGG-------------------- 169
Query: 194 RNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDS 253
R G + P I PI L+PYQ RW IKARVT+K D+R ++N RG+GK+FS +LLD
Sbjct: 170 RPGGGSVHAGMP--IYPIEGLSPYQNRWTIKARVTSKFDIRHWSNQRGEGKLFSVNLLD- 226
Query: 254 DGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDL 313
D GEI+ T FN VDRFY +++ VYLISK + A+K F++L+NE+EI E ++ ++
Sbjct: 227 DSGEIKATGFNDAVDRFYPLLQENHVYLISKARVNIAKKQFSNLQNEYEITFENSTEIEE 286
Query: 314 CTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILN 372
CT+ D +P+ ++ F I+E+ES E N DVIGI+ S I+ K Q+R L
Sbjct: 287 CTDATD-VPEVKYEFVRINELESVEANQTCDVIGILDSYGELSEIVSKASQRPVQKRELT 345
Query: 373 LKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQL 432
L D RSV+LTLWG K + V PVL+ K KV DF G+S+ S+ +
Sbjct: 346 LVDQGNRSVKLTLWG----KTAETFPTNAGVDEKPVLAFKGVKVGDFGGRSLSMFSSSTM 401
Query: 433 FINPDFAEAHELREWFDSGGKNA--------ATVSISREIAAGGAKNEIHKTVSQIKNEG 484
INPD E+H LR W+D+ G +A + GA +T+ Q+K+E
Sbjct: 402 LINPDITESHVLRGWYDNDGAHAQFQPYTNGGVGGGAMGGGGAGANMAERRTIVQVKDEN 461
Query: 485 LGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEID 543
LG SEKPD+ VRA + +IK ++ YTAC CNKKV N W+C++C++
Sbjct: 462 LGMSEKPDYFNVRATVVYIKQENLYYTAC----ASEGCNKKVNLDHENNWRCEKCDRSYA 517
Query: 544 ECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRV 603
+YRY+L + D TG W++ F E +++G A EL+ L+ E + + F +
Sbjct: 518 TPEYRYILSTNVADATGQMWLSGFNEDATQLIGMSAGELHKLREESESE--FSAALHRAA 575
Query: 604 FNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
Y+F + K + + D RV+ T+ RA V+++ L+D I
Sbjct: 576 NRMYMFNCRAKMDTFNDTARVRYTISRAAPVDFAKAGMELVDAI 619
>gi|390462862|ref|XP_002747872.2| PREDICTED: replication protein A 70 kDa DNA-binding subunit
[Callithrix jacchus]
Length = 672
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 224/644 (34%), Positives = 352/644 (54%), Gaps = 60/644 (9%)
Query: 17 DVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQVKKGSVV 73
D + KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ GQ+ V
Sbjct: 74 DTSIKPMLQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNTLVEQGQLASNCVC 133
Query: 74 QLIDYICSTVQN-RKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRV 132
Q+ +I +T+++ R++++++ +E ++ E +G V++
Sbjct: 134 QVNRFIVNTLKDGRRVVILMELE-VLKSAEAVG------------------------VKI 168
Query: 133 NNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPN 192
N N G Q + + S P P GS T+ Y
Sbjct: 169 GNPVPYNEGHGQQQVAPPPVPAASPASSKPQ------PQNGS--SGVGSTLPKAYGASKT 220
Query: 193 F-RNHGPILKNEA---PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSF 248
F + GP L + + A+++PIA+L PYQ +W I ARVT K +R ++N+RG+GK+FS
Sbjct: 221 FGKAGGPSLSSTSGGTQAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSL 280
Query: 249 DLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEAT 308
+L+D + EIR T FN VD+F+ +IEV +VY SKG+LK A K F +KN++E+
Sbjct: 281 ELVD-ESAEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNE 339
Query: 309 STVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGMETQ 367
++V C E+D +P QF F I +ES +S+VD+IGI S + I +R N E
Sbjct: 340 TSVMPC-EDDHHLPTVQFDFTGIDNLESKSKDSLVDIIGICKSYEDATKITVRSNNREVA 398
Query: 368 RRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTI 427
+R + L DTSG+ V TLWG+ +K D PVL++K +V+DF G+S+ +
Sbjct: 399 KRNIYLMDTSGKVVTATLWGEDADK--------FDGSRQPVLAIKGARVSDFGGRSLSVL 450
Query: 428 PSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQIKNEGLG 486
S+ + +NPD EA++LR WFDS G+ VSIS + G G + KT+ ++K+E LG
Sbjct: 451 SSSTIIVNPDIPEAYKLRGWFDSEGQALDGVSISDLKSGGLGGSSTNWKTLYEVKSENLG 510
Query: 487 RSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDEC 545
+ +KPD+ + A + +++ ++ Y ACP + CNKKV Q ++C++C+ E
Sbjct: 511 QGDKPDYFSSVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCDTEFPSF 566
Query: 546 DYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFN 605
YR +L I D WVT FQES E ILG A L LK +++ F E+ ++ F
Sbjct: 567 KYRMILSVNIADFQENQWVTCFQESAEAILGQSAAYLGELKD--KNEQAFEEVFQNANFR 624
Query: 606 QYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
++FR+++K E Y DE R+K TV+ V+Y R L+ I +
Sbjct: 625 SFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVQSIRR 668
>gi|197098316|ref|NP_001126290.1| replication protein A 70 kDa DNA-binding subunit [Pongo abelii]
gi|75054872|sp|Q5R7Q4.1|RFA1_PONAB RecName: Full=Replication protein A 70 kDa DNA-binding subunit;
Short=RP-A p70; AltName: Full=Replication factor A
protein 1; Short=RF-A protein 1
gi|55730978|emb|CAH92206.1| hypothetical protein [Pongo abelii]
Length = 616
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 229/655 (34%), Positives = 359/655 (54%), Gaps = 68/655 (10%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD N KP++QV++I+ I G++ RYR L+SD ++T + M ATQLN V+ Q+
Sbjct: 12 AIMQKGDTNIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMSATQLNPLVEQEQL 71
Query: 68 KKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCE----PIGNPKIFSESELTAQKTIP 122
V Q+ +I +T+++ R++++++ +E ++ E IGNP ++E
Sbjct: 72 SSNCVCQINRFIVNTLKDGRRVVILMELE-VLKSAEVVGVKIGNPVPYNEG--------- 121
Query: 123 SNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPT 182
L QP + S S P +GT AGS T
Sbjct: 122 ---LGQP--------------QVAPPAPAASPAASSRPQPQNGT---SGAGS-------T 154
Query: 183 VQPPYQPPPNF-RNHGPILKNEA---PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNN 238
V Y F + GP L + + ++++PIA+L PYQ +W I ARVT K +R ++N
Sbjct: 155 VSKAYGASKTFGKAAGPSLSHNSGGTQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSN 214
Query: 239 ARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLK 298
+RG+ K+FS +L+D + GEIR T FN VD+F+ +IEV +VY SKG+LK A K F +K
Sbjct: 215 SRGEEKLFSLELVD-ESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVK 273
Query: 299 NEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI 358
N++E+ ++V C E+D +P QF F I ++E+ +S+VD+IGI S + I
Sbjct: 274 NDYEMTFNNETSVMPC-EDDHHLPTVQFDFTGIDDLENKSKDSLVDIIGICKSYEDATKI 332
Query: 359 -LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVN 417
+R N E +R + L DTSG+ V TLWG+ +K Q PVL++K +V+
Sbjct: 333 TVRSNNREVAKRNIYLMDTSGKVVTATLWGEDADKFDGSRQ--------PVLAIKGARVS 384
Query: 418 DFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKT 476
DF G+S+ + S+ + NPD EA++LR WFD+ G+ VSIS + G G N KT
Sbjct: 385 DFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQALDGVSISDLKSGGVGGGNTNWKT 444
Query: 477 VSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQC 535
+ ++K+E LG+ +KPD+ + A + +++ ++ Y ACP + CNKKV Q ++C
Sbjct: 445 LYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLYRC 500
Query: 536 DRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRF 595
++C+ E YR +L I D WVT FQES E ILG A L LK +++ F
Sbjct: 501 EKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELKD--KNEQAF 558
Query: 596 GEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
E+ ++ F ++FR+++K E Y DE R+K TV+ V+Y R L+ I +S
Sbjct: 559 EEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVMSIRRS 613
>gi|432895940|ref|XP_004076236.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Oryzias latipes]
Length = 655
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 220/679 (32%), Positives = 365/679 (53%), Gaps = 57/679 (8%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLIGSTQ--ERYRFLISDSVSTQHAM----L 54
M + LT +I + G PL+Q+++I+ + S R+R ++SD QHA+ L
Sbjct: 1 MSITLTQGAIEALYKGLPIKNPLLQLLNIRQMTSNSGLPRFRLMMSDG---QHALSSFLL 57
Query: 55 ATQLNDRVKTGQVKKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCEP---IGNPKIF 110
TQLN + + + + L + ST+ + R + V++ME + E IGNP +
Sbjct: 58 TTQLNHLPEQKLLVQHCICMLKKVVTSTLADGRTAVTVMDMEVVQSAEETGGRIGNPTPY 117
Query: 111 S----------ESELTAQKTIPSNNLPQP-VRVNNYSAPNSGTFNLQNSGTF-----NSQ 154
+ +S T + S P P R ++S N+ + NS ++
Sbjct: 118 NRDGQMSSPAKKSSATLEPDSSSATAPGPSYRSTSFSRSNAAQSSPTNSPMKVSPMKDTN 177
Query: 155 NPGSFSTPNSGTFRAPNAGSIVRSFQPT--VQPPYQPPPNFRNHGPI-LKNEAPARIIPI 211
+P FS A + S ++ F P P + P + P+ + +P ++ PI
Sbjct: 178 SPMKFSP-------AKDTNSPMK-FSPAKDTNSPMKSSPAKDTNSPMKASSSSPMKVFPI 229
Query: 212 AALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFY 271
+ LNPYQ +W I+ARVT K ++R+++N+RG+GK+FSF+++D + GEI++T FN VD+F+
Sbjct: 230 STLNPYQSKWTIRARVTNKSNVRQWSNSRGEGKLFSFEVVD-ESGEIKITAFNNEVDKFF 288
Query: 272 EIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHI 331
++E G+VY ISK +LK A K ++ LKN++E+ L A S++ C E++ SIP +F I
Sbjct: 289 SLLEQGKVYYISKATLKVANKQYSTLKNDYEMTLHAHSSIVPC-EDNQSIPTMNCNFVQI 347
Query: 332 SEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCN 391
E+E+ + ++I+DVIGI I KN E +R L+L D+SG+ V TLWG+
Sbjct: 348 EELENRDKDAIIDVIGICKKAEDVSRITTKNSREVSKRALHLIDSSGKEVTATLWGE--- 404
Query: 392 KEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSG 451
E +K D PV+++K +++DF G+S+ + S+ + +NPD EA LR W+D
Sbjct: 405 -EAEKF----DGSGQPVVAIKGARLSDFGGRSLSALFSSTIMVNPDIPEAFRLRAWYDRE 459
Query: 452 GKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYT 511
G + S++ + KT+S +KNE +G +K ++ + A + +++ ++ Y
Sbjct: 460 GYAVNSQSLTERRSTNSGSRMNWKTLSDVKNENMGHEDKAEYFSCLATVVYMRKENCLYQ 519
Query: 512 ACPLMIGDRQCNKKV-TQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQES 570
ACP CNKKV Q ++C++CN+E + YR+LL A + D WVT FQE+
Sbjct: 520 ACP----SADCNKKVIIQHNGLYRCEKCNREFSDFKYRFLLSANLADFGDNQWVTCFQET 575
Query: 571 GEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIR 630
E +LG A+ L L+ D+ F E+ + F ++F+ ++K E Y DE RVK+TV+
Sbjct: 576 AEVLLGHSAQTLGQLRE--TDEAAFDEVFQKANFRTHIFKNRVKLETYNDESRVKVTVME 633
Query: 631 ADQVNYSSESRYLLDLISK 649
V++ SR LL I +
Sbjct: 634 VLPVDHREYSRRLLSNIRR 652
>gi|388856821|emb|CCF49608.1| probable Replication factor-A protein 1 [Ustilago hordei]
Length = 627
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 213/643 (33%), Positives = 338/643 (52%), Gaps = 63/643 (9%)
Query: 22 PLVQVMDIKLIGSTQ-------ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQ 74
P+ Q++ IK I ++ +RYR ++SD V +MLA+Q V++G+++K +V+
Sbjct: 27 PICQILSIKKIQASATSASNVGDRYRIILSDGVHYAQSMLASQKRSMVESGELEKHCLVR 86
Query: 75 LIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNN 134
+ Y ++VQNR+I+++L++E A K ++ L P V++
Sbjct: 87 ISQYASNSVQNRRILILLDLEV--------------------AHKPT-ADRLGSPTNVDD 125
Query: 135 YSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFR 194
G Q G N+ G+ + N+ R A S + + +
Sbjct: 126 AIKSEGGV--KQEGGAGNAL--GNSNLGNNSAGRTTPATSAAGAGKIGGGAGRPGGSSVN 181
Query: 195 NHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSD 254
PI PI L+PYQ RW IKARVT+K D+R ++N RG+GK+FS +LLD D
Sbjct: 182 AGMPIY---------PIEGLSPYQNRWTIKARVTSKSDIRHWSNQRGEGKLFSVNLLD-D 231
Query: 255 GGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLC 314
GEI+ T FN VDRFY +++ VYLISK + A+K F++L+NE+EI E ++ ++ C
Sbjct: 232 SGEIKATGFNDTVDRFYSLLKENHVYLISKAKVNIAKKQFSNLQNEYEITFENSTEIEEC 291
Query: 315 TEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILNL 373
T+ D +P+ ++ F I+E+ES E N DVIG++ S I+ K Q+R L L
Sbjct: 292 TDATD-VPEVKYEFVRINELESVEPNQTCDVIGVLDSYGELSEIVSKASQRPVQKRELTL 350
Query: 374 KDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF 433
D G+SV LTLWG K + V PV++ K KV DF G+S+ S+ +
Sbjct: 351 VDQGGKSVRLTLWG----KNAETFPNNAGVDEKPVIAFKGVKVGDFGGRSLSMFSSSTML 406
Query: 434 INPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEI--------HKTVSQIKNEGL 485
INPD E+H LR W+D+ G A + S GGA +T++Q+K+E L
Sbjct: 407 INPDITESHVLRGWYDNDGARAQFEAFSNAGVGGGALGAAGAGGNMAERRTIAQVKDENL 466
Query: 486 GRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDE 544
G +EKPD+ +RA + +IK ++ YTACP CNKKVT N W+C++C++ +
Sbjct: 467 GMTEKPDYFNIRATVVYIKQENLYYTACP----SDGCNKKVTLDHENNWRCEKCDRSYEA 522
Query: 545 CDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVF 604
+YRY+L + D TG W++ F E +++G A EL+ L+ + + + +
Sbjct: 523 PEYRYILSTNVADATGQIWLSGFNEDATKLIGMSAGELHQLRENSESE--YSAALHRAAN 580
Query: 605 NQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
YLF + K + + D+ RV+ T+ R+ V+++ L+D I
Sbjct: 581 RMYLFNCRAKMDTFNDQTRVRYTISRSAPVDFAKAGAELVDAI 623
>gi|395853270|ref|XP_003799138.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit
[Otolemur garnettii]
Length = 616
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 217/651 (33%), Positives = 362/651 (55%), Gaps = 60/651 (9%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD + KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ ++
Sbjct: 12 AIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEQQRL 71
Query: 68 KKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCEP----IGNPKIFSESELTAQKTIP 122
+ Q+ +I +T+++ R++++++ +E ++ E IGNP ++E Q+ +P
Sbjct: 72 SSNCICQINRFIVNTLKDGRRVVILMELE-VLKSAEAVGLKIGNPVPYNEGH-GQQQVVP 129
Query: 123 SNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPT 182
S P ++P++ QN G+ + S S S TF P S+
Sbjct: 130 S-----PATT---ASPSTSRPQPQN-GSLGMGSAVSKSFGASKTFGKPGGMSL------- 173
Query: 183 VQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGD 242
P A+++PIA+L PYQ +W I ARVT K +R ++N+RG+
Sbjct: 174 ---------------PNTSGGTQAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGE 218
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE 302
GK+FS +L+D GEIR T FN VD+F+ +IEV +VY +KG+LK A K F+ +KN++E
Sbjct: 219 GKLFSVELVDQS-GEIRATAFNDQVDKFFPLIEVNKVYYFTKGTLKIANKQFSAVKNDYE 277
Query: 303 IFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRK 361
+ ++V C E+D +P QF F I ++E+ +S+VD+IG+ + + I ++
Sbjct: 278 MTFSNDTSVMPC-EDDHHLPTVQFDFTGIGDLENKPKDSLVDIIGVCKNYEDATKITVKS 336
Query: 362 NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG 421
E +R + L DTSG+ V TLWG+ +K Q PV+++K +V+DF G
Sbjct: 337 TNREVAKRNIYLMDTSGKVVTTTLWGEDADKFDGSRQ--------PVMAIKGARVSDFGG 388
Query: 422 KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQI 480
+S+ + S+ + +NPD EA++LR WFDS G+ VSIS + G G N KT++++
Sbjct: 389 RSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQALDGVSISDLKSGGVGGSNTNWKTLNEV 448
Query: 481 KNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCN 539
K+E LG+ +K D+ + A + +++ ++ Y ACP + CNKKV Q ++C++C+
Sbjct: 449 KSENLGQGDKADYFSSVATVVYLRKENSMYQACPT----QDCNKKVIDQQNGLYRCEKCD 504
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEII 599
E YR +L I D WVT FQES E ILG Y+ + + +++ F E+
Sbjct: 505 SEFPNFKYRMILSVNIADFQDNQWVTCFQESAEAILG--QNTAYLGELKEKNEQAFEEVF 562
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
++ F + FR+++K E Y DE R+K TV+ V+Y R L+ I ++
Sbjct: 563 QNANFRSFTFRIRVKLENYNDESRIKATVMDVKPVDYREYGRRLMTNIRRN 613
>gi|213512619|ref|NP_001135257.1| Replication protein A 70 kDa DNA-binding subunit [Salmo salar]
gi|209155456|gb|ACI33960.1| Replication protein A 70 kDa DNA-binding subunit [Salmo salar]
Length = 607
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 226/654 (34%), Positives = 351/654 (53%), Gaps = 65/654 (9%)
Query: 5 LTPNSI-SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLND 60
LT +I +L G + P++Q+++I+ I GS R+R ++SD + + ML+TQLN
Sbjct: 5 LTKGAIEALTKGSNDVQNPILQLVNIRKIDGGSGPARFRLMMSDGQHSMSSFMLSTQLNP 64
Query: 61 RVKTGQVKKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCE---PIGNPKIFSESELT 116
+ ++ + QL + + +++ R+++V+L+ME + E IG P+ + E +
Sbjct: 65 MAEDNRLAPNCICQLKRNVTNVLKDGRRVVVILDMEVVKSADEVAGKIGEPQPYVEGQSK 124
Query: 117 AQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIV 176
A PQ SAPN L P +G + N G
Sbjct: 125 A---------PQ-------SAPNPSVHPL---------------PPQNGIDGSMNKGPSR 153
Query: 177 RSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRY 236
PP P A+++PIA+LNPYQ +W I+ARVT K +R +
Sbjct: 154 EFGGKKGMPPSAMPST---------PGGSAKVVPIASLNPYQSKWTIRARVTNKSGIRTW 204
Query: 237 NNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNH 296
+N+RGDGK+FS +++D + GEIRVT F VD+FY IIE G+V+ ISKGSLK A K ++
Sbjct: 205 SNSRGDGKLFSMEIVD-ESGEIRVTAFTQEVDKFYSIIETGKVFYISKGSLKIANKQYSS 263
Query: 297 LKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSV 356
LKN++E+ L ST+ C + D +P Q +F I+++++ E ++I+DVIG+ SV+
Sbjct: 264 LKNDYEMTLNGESTIIPCEDTQD-VPMVQCNFVSIADLQAREKDTILDVIGVCKSVSDVT 322
Query: 357 PILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKV 416
+ KN E +R LNL D SG+ VE+TLWG+ E D P+L++K K+
Sbjct: 323 RLNTKNNREVSKRTLNLMDQSGKLVEVTLWGEEA--------ENFDGSGQPILAIKGAKL 374
Query: 417 NDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKT 476
+D+ G+S+ S+ + +NPD EA++LR W+D G + S++ GG N KT
Sbjct: 375 SDYGGRSLSASFSSTVMVNPDIPEAYKLRGWYDKEGHSMDGQSLTEARTGGGGGNTNWKT 434
Query: 477 VSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQC 535
++ IK E LG +K D+ + A I +I+ ++ Y ACP + CNKKV Q ++C
Sbjct: 435 LADIKTEHLGHGDKADYFSCIATIVYIRKENCLYQACP----SQDCNKKVVDQQNGMFRC 490
Query: 536 DRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRF 595
++C++E YR +L A I D WVT FQES E ILG A L LK ++ F
Sbjct: 491 EKCDKEFPNFKYRLILSANIADYGDNQWVTCFQESAEAILGQNAAYLGQLKDS--NEAAF 548
Query: 596 GEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
EI + F+ ++FR ++K E Y DE R+K TV+ V++ S+ L+ I K
Sbjct: 549 EEIFQQANFHTFVFRNRVKLETYNDESRIKATVMEVKPVDHKEYSKRLIMNIRK 602
>gi|410910178|ref|XP_003968567.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Takifugu rubripes]
Length = 600
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 217/648 (33%), Positives = 349/648 (53%), Gaps = 71/648 (10%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+L NG D N ++Q+ +I+ I G+ R+R ++SD T + ML+TQLN ++ +
Sbjct: 11 ALSNGSDAND-FVLQLTNIRKIEGGNGLPRFRVMMSDGRHTLSSFMLSTQLNYLIEENTL 69
Query: 68 KKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCE---PIGNPKIFSESELTAQKTIPS 123
+ L ++ + +++ R+++++L ++ I E IG+P ++ES+ Q+T +
Sbjct: 70 SLYCICVLKRHVTNILKDGRRVVIILEIDVIKRAEEVAGRIGDPTPYTESQTKPQQTTSN 129
Query: 124 NNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSF-STPNSGTFRAPNAGSIVRSFQPT 182
++ P++ N + N G S F + P + STP G+
Sbjct: 130 HDSRPPLQPQNRNEMNRGF-----SKDFGKKGPAAMPSTPGGGS---------------- 168
Query: 183 VQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGD 242
+++PIA+LNPYQ +W I+ARVT K +R ++N+RGD
Sbjct: 169 ------------------------KVVPIASLNPYQSKWTIRARVTNKSSIRTWSNSRGD 204
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE 302
GK+F+ +L+D + GEIR+T FN VD+F+ +IE G+VY ISK SLK A K + +KN++E
Sbjct: 205 GKLFTVELVD-ESGEIRMTAFNQEVDKFFGLIEAGKVYYISKCSLKIANKQYTSVKNDYE 263
Query: 303 IFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN 362
+ L S++ C + D +P Q F I ++E+ E +SIVDVIG+ + + K+
Sbjct: 264 MTLNGESSIVPCEDSCD-VPMVQCDFVSIGDLENKEKDSIVDVIGVCKKTDEATHFTSKS 322
Query: 363 GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK 422
E +R L+L D SG+ V +TLWG+ E +K D P++++K K++DF G
Sbjct: 323 NREMSKRTLHLIDMSGKLVTVTLWGE----EAEKF----DGSGEPIIAIKGAKLSDFGGC 374
Query: 423 SIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKN 482
S+ S+ L +NPD EAH+LR W+D G + S++ + GG N KT++ +K
Sbjct: 375 SLSASFSSTLMVNPDIPEAHKLRGWYDKEGHSMEGQSLTEMRSGGGGGNTNWKTLTDVKT 434
Query: 483 EGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQE 541
E LG EK D+ T A I +++ ++ Y ACP + CNKKV Q ++C++C++E
Sbjct: 435 EHLGHGEKADYYTCIATIVYLRKENCLYQACP----SQDCNKKVVDQQNGMFRCEKCDKE 490
Query: 542 IDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRS 601
YR +L A I D WVT FQES E ILG A L LK ++ F E+ +
Sbjct: 491 FPNFKYRLILSANIADYGDNQWVTCFQESAEAILGQNAAYLGQLKE--SNEAAFDEVFQQ 548
Query: 602 RVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
FN ++FR ++K E Y DE R+K TV+ V++ S+ L+ I K
Sbjct: 549 ANFNSFIFRSRVKLETYNDESRIKATVMEVKPVDHKDYSKRLIMNIRK 596
>gi|115496244|ref|NP_001068644.1| replication protein A 70 kDa DNA-binding subunit [Bos taurus]
gi|111308484|gb|AAI19987.1| Replication protein A1, 70kDa [Bos taurus]
gi|296476839|tpg|DAA18954.1| TPA: replication protein A1 [Bos taurus]
Length = 616
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 221/651 (33%), Positives = 360/651 (55%), Gaps = 72/651 (11%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD + KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ ++
Sbjct: 12 AIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEERL 71
Query: 68 KKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCEP----IGNPKIFSESELTAQKTIP 122
+ Q+ +I +T+++ R++++++ +E ++ E IGNP ++E Q+ +
Sbjct: 72 SSNCICQINRFIVNTLKDGRRVVILMELE-VLKSAEAVGSKIGNPVPYNEGH--GQQPV- 127
Query: 123 SNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPN-----SGTFRAPNAGSIVR 177
+P PV ++P + QN +PG ST + S TF S V
Sbjct: 128 ---VPPPVSA---TSPPTSRPQQQNG------SPGMASTASKAFGASKTFGKAGGTSQVN 175
Query: 178 SFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYN 237
S T A+++PIA+L PYQ +W I ARVT K +R ++
Sbjct: 176 SSGGT----------------------QAKVVPIASLTPYQSKWTICARVTNKSQIRTWS 213
Query: 238 NARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHL 297
N+RG+GK+FS +L+D + GEIR T FN D+F+ +I+V +VY SKG+LK A K F +
Sbjct: 214 NSRGEGKLFSIELVD-ESGEIRATAFNEQADKFFPLIDVNKVYYFSKGTLKIANKQFTAV 272
Query: 298 KNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVP 357
KN++E+ ++V C E+ +P QF F I ++ES +S+VD+IGI +
Sbjct: 273 KNDYEMTFNNETSVMPC-EDGHHLPTVQFDFTGIGDLESKSKDSLVDIIGICKNYEDVTK 331
Query: 358 ILRK-NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKV 416
I+ K N E +R + L D SG+ V TLWGD +K Q PV+++K +V
Sbjct: 332 IIVKSNNREVSKRNIYLMDMSGKVVNATLWGDDADKFDGSRQ--------PVMAIKGARV 383
Query: 417 NDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGA--KNEIH 474
+DF G+S+ + S+ + +NPD EA++LR WFDS G+ +SIS ++ +GGA N
Sbjct: 384 SDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQALDGISIS-DLKSGGAGGSNTNW 442
Query: 475 KTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRW 533
KT+ ++K+E LG+ +KPD+ + A + +++ ++ Y ACP + CNKKV Q +
Sbjct: 443 KTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLY 498
Query: 534 QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDV 593
+C++C+ E YR +L I D WVT FQES E ILG Y+ + + +++
Sbjct: 499 RCEKCDSEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILG--QSTAYLGELKEKNEQ 556
Query: 594 RFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
F E+ ++ F + FR+++K E Y DE R+K TV+ V+Y R L+
Sbjct: 557 AFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVVDVKPVDYREYGRRLV 607
>gi|443893823|dbj|GAC71279.1| hypothetical protein PANT_2d00035 [Pseudozyma antarctica T-34]
Length = 606
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 217/665 (32%), Positives = 345/665 (51%), Gaps = 86/665 (12%)
Query: 4 NLTPNSIS-LINGGDVNSK---PLVQVMDIKLIGSTQ-------ERYRFLISDSVSTQHA 52
+LT +I+ ++ D +S P+ Q++ IK I ++ +RYR ++SD V A
Sbjct: 5 DLTQGAIAQMVQTADPSSSVQNPVCQILSIKKIQASAASASSMGDRYRIILSDGVKYAQA 64
Query: 53 MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSE 112
MLA+Q V++G+++K +V++ Y ++VQ R+I+++L++ + P +I S
Sbjct: 65 MLASQKRSMVESGELEKHCLVRISQYASNSVQGRRILILLDLSVV----HPPTADRIGS- 119
Query: 113 SELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNA 172
P V++ P G +G G+ N G +A
Sbjct: 120 ----------------PTNVDDSIKPEGGVKQEGGAG-------GALGNSNVGN---NSA 153
Query: 173 GSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGD 232
G + P Y PI L+PYQ RW IKARVT+K D
Sbjct: 154 GRTTPATSAAGMPIY----------------------PIEGLSPYQNRWTIKARVTSKSD 191
Query: 233 LRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQK 292
+R ++N RG+GK+FS +LLD D GEI+ T FN VDRFY +++ VYLISK + A+K
Sbjct: 192 IRHWSNQRGEGKLFSVNLLD-DSGEIKATGFNDAVDRFYSMLQENHVYLISKARVNIAKK 250
Query: 293 NFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV 352
F++L+NE+EI E ++ ++ CT+ D +P+ ++ F I+E+ES E N DVIG++ S
Sbjct: 251 QFSNLQNEYEITFENSTEIEECTDATD-VPEVKYEFVRINELESVEPNQTCDVIGVLDSY 309
Query: 353 NPSVPILRKNGME-TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSV 411
I+ K Q+R L L D RSV LTLWG K + V PV++
Sbjct: 310 GELSEIVSKASQRPVQKRELTLVDQGQRSVRLTLWG----KNAENFPNHAGVDEKPVIAF 365
Query: 412 KSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNA------ATVSISREIA 465
K KV DF G+S+ S+ + INPD E+H LR WFD+ G +A +
Sbjct: 366 KGVKVGDFGGRSLSMFSSSTMLINPDITESHVLRGWFDNDGAHAQFQPFTNGGGAGGAMG 425
Query: 466 AGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKK 525
G A +T++Q+K++ LG +EKPD+ VRA + +IK ++ YTACP CNKK
Sbjct: 426 GGAANMAERRTIAQVKDQNLGMTEKPDYFNVRATVVYIKQENLYYTACP----SDGCNKK 481
Query: 526 VT--QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELY 583
VT GN W+C++C++ ++ +YRY+L + D TG W++ F + +++G A EL+
Sbjct: 482 VTPDHEGN-WRCEKCDRSYEQPEYRYILSTNVADATGQIWLSGFNDDATKLMGMSAGELH 540
Query: 584 MLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYL 643
L+ E + + F ++ Y F + K + + D+ RV+ T+ RA V+++ L
Sbjct: 541 KLREESESE--FTAVLHRAANRMYTFNCRAKMDSFNDQARVRYTISRAAPVDFAKAGAEL 598
Query: 644 LDLIS 648
+D I+
Sbjct: 599 VDAIN 603
>gi|392580530|gb|EIW73657.1| hypothetical protein TREMEDRAFT_67478 [Tremella mesenterica DSM
1558]
Length = 596
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 212/663 (31%), Positives = 341/663 (51%), Gaps = 88/663 (13%)
Query: 1 MPVNLTPNSISLINGGD------VNSKPLVQVMDIKLI----GSTQERYRFLISDSVSTQ 50
M LT + L++ D + S+P++Q + +K I S +RYR ++SD
Sbjct: 1 MASPLTQDFCRLVHSSDELPESVITSEPILQAVSVKKINAPGASGLDRYRVILSDGTHFL 60
Query: 51 HAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIF 110
MLATQLN V + ++ K +V++L ++ + VQ RK+I++L +E + E IGNP
Sbjct: 61 QGMLATQLNPMVDSKELDKNTVIKLKTFVTNVVQGRKLIIILTLEVVPWSGEKIGNP--- 117
Query: 111 SESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAP 170
N+ Q + +AP S + N+ P
Sbjct: 118 -------------TNVEQAAPL---AAPQS-VLKPSTTANVNASKP-------------- 146
Query: 171 NAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAK 230
+ + Q T P P + PI L+PYQ +W IKARVT K
Sbjct: 147 ----VAKQPQKTAAAPMGP------------------LYPIEGLSPYQNKWTIKARVTQK 184
Query: 231 GDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPA 290
DL+ ++N RG+GK+FS +D D GEIR T FN VD+FY++++ G+VY +S+ + A
Sbjct: 185 SDLKHWSNQRGEGKLFSVTFMD-DTGEIRATGFNETVDQFYDLLQEGKVYFVSRARINIA 243
Query: 291 QKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVI 350
+K FN++ NE+EI E ++ + C +D+S+P+ +++F+ + ++ + + + DVIG+V
Sbjct: 244 KKQFNNVNNEYEITFENSTEIQPC--DDESVPQIKYNFKSVGDLGDLQKDELCDVIGVVK 301
Query: 351 SVNPSVPILRK-NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVL 409
V + K +R + L D SG+SV LTLWG K E PV+
Sbjct: 302 EVGELGSVTSKATNKPFAKRDIQLVDQSGQSVRLTLWG--------KQAETFQADDEPVI 353
Query: 410 SVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNA-----ATVSISREI 464
+ K KV DF G+S+ S + +NPD EAH LR W+D+ G++ + ++S
Sbjct: 354 AFKGVKVGDFGGRSLSMFSSATMALNPDIPEAHSLRGWYDAEGRSKHFQAYTSATVSNSD 413
Query: 465 AAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNK 524
+EI KT+ Q K+E LG S+K D+ T +A ++FIKS++F Y AC G CNK
Sbjct: 414 GQITKPSEI-KTIGQAKDEQLGMSDKTDYFTTQATVSFIKSETFSYPACANPDG---CNK 469
Query: 525 KVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYM 584
KVT G+ W+C++C++ +RY+L + D G W+TAF E E+I+G A EL
Sbjct: 470 KVTDEGSGWRCEKCDKTWPSPIHRYILSMNVMDYAGSFWITAFNEVAEQIMGISANELME 529
Query: 585 LKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
++ + +DV F + Y F++ K++ + D+ RV+ RA +Y ++S +L+
Sbjct: 530 MR-DNGNDVEFQRSFQKASGRTYNFQMMAKQDSFNDQPRVRYQCRRAALPDYPADSAHLV 588
Query: 645 DLI 647
LI
Sbjct: 589 SLI 591
>gi|196010750|ref|XP_002115239.1| hypothetical protein TRIADDRAFT_50671 [Trichoplax adhaerens]
gi|190582010|gb|EDV22084.1| hypothetical protein TRIADDRAFT_50671 [Trichoplax adhaerens]
Length = 556
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 212/635 (33%), Positives = 343/635 (54%), Gaps = 99/635 (15%)
Query: 27 MDIKLIGSTQ-ERYRF-----LISDSVSTQHA-MLATQLNDRVKTGQVKKGSVVQLIDYI 79
+ I+L + + ++RF ++SD + + MLATQLN RV +G++ ++++L +Y
Sbjct: 5 LQIRLFATVKTHQHRFFKWLIVLSDGIHAYSSVMLATQLNQRVTSGELDAKAIIKLNNYT 64
Query: 80 CSTVQ-NRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAP 138
C+ VQ RK++V+L++ +L C SE+++ Q P+P
Sbjct: 65 CNIVQETRKVLVILDL--TVLTCG--------SETDIIGQ--------PKP--------- 97
Query: 139 NSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGP 198
+N Q S + P +PT+ P
Sbjct: 98 ------------YNDQ---SVTNP-----------------RPTIHPQQN---------- 115
Query: 199 ILKNEAPARII-PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGE 257
L +++ RI+ PI++L PYQ RW I+ RVT+K ++R+++N+RG+GK+FS DL+D + GE
Sbjct: 116 -LVDKSENRIVFPISSLTPYQNRWTIRTRVTSKSEIRKWSNSRGEGKLFSVDLID-ESGE 173
Query: 258 IRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEE 317
IR T F V++FY+++EV +VY IS+ S+K A KNF +KN++E+ + V+ C ++
Sbjct: 174 IRATAFRDQVEKFYDVLEVNKVYYISRCSIKTANKNFTSIKNDYEMTFTNETAVEPC-DD 232
Query: 318 DDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTS 377
S+PK F+F I +IE+ ++DV+G+V S + V I K+ + +R + L D S
Sbjct: 233 IASLPKVSFNFVRIGDIENQPAERMIDVVGVVKSADDVVTINTKSNRQVNKRDIELVDDS 292
Query: 378 GRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPD 437
G+ V LTLWG E D FPV++V+ +V +F G+S+ + S+QL NPD
Sbjct: 293 GKVVRLTLWGTNA--------EEFDGSQFPVVAVRGARVTEFGGRSLSVVGSSQLMTNPD 344
Query: 438 FAEAHELREWFDSGGKNAATVSISR---EIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWV 494
EAH LR WFD GK+ VSIS +I + G K +S I E LG+ EK D+
Sbjct: 345 IPEAHILRGWFDVQGKDQELVSISTKRGDIGSPGFSGN-WKNISDIHGENLGQQEKADYF 403
Query: 495 TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQ 554
++A I +I+ ++ Y ACP CNKKV G ++C++CNQ + YR ++ A
Sbjct: 404 NLKATIIYIRKENLMYKACP----KEDCNKKVIDQGGSYRCEKCNQTFPDFKYRLMISAS 459
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIK 614
I D TG W+T FQE+GE +L C A++L K D+ ++ I +F Y+ +++ K
Sbjct: 460 IVDSTGSNWLTFFQETGEAMLKCTAQQLGAWKE--NDESKYEHTINEALFQSYILKVRAK 517
Query: 615 EELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
E + DE R+K + + ++Y +SR LL+ I +
Sbjct: 518 MESFNDENRLKCSCVNLTPMDYVQQSRRLLEGIRR 552
>gi|74143871|dbj|BAE41250.1| unnamed protein product [Mus musculus]
gi|74195701|dbj|BAE39655.1| unnamed protein product [Mus musculus]
Length = 621
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 218/647 (33%), Positives = 353/647 (54%), Gaps = 63/647 (9%)
Query: 21 KPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQVKKGSVVQLID 77
KP++QV++I+ I G+ RYR L+SD ++T + MLATQLN V+ GQ+ V Q+
Sbjct: 22 KPILQVINIRPISTGNRSPRYRLLMSDGLNTLSSFMLATQLNTLVEGGQLASNCVCQVHK 81
Query: 78 YICSTVQN-RKIIVVLNMETIILDCE----PIGNPKIFSES-ELTAQKTIPSNNLPQPVR 131
+I +T+++ RK++V++++E ++ E IGNP ++E Q+ +P P
Sbjct: 82 FIVNTLKDGRKVVVLMDLE-VMKSAEDVGLKIGNPVPYNEGYGQQQQQQQQQQAVPSPAS 140
Query: 132 VNNYSA----PNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPY 187
A P +G+ + ++ F P P+ G+
Sbjct: 141 AATPPASKPQPQNGSLGMGSTAAKAYGASKPFGKPAGTGLLQPSGGT------------- 187
Query: 188 QPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFS 247
++++PIA+L PYQ +W I ARVT K +R ++N+RG+GK+FS
Sbjct: 188 -----------------QSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFS 230
Query: 248 FDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEA 307
+L+D + GEIR T FN VD+F+ +IEV +VY SKG+LK A K F+ +KN++E+
Sbjct: 231 LELVD-ESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGALKIANKQFSAVKNDYEMTFNN 289
Query: 308 TSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGMET 366
++V C E+ +P QF F I ++ES +++VD+IGI S S+ I ++ N E
Sbjct: 290 ETSVLPC-EDGHHLPTVQFDFTGIGDLESKAKDALVDIIGICKSYEDSIKITVKSNNREV 348
Query: 367 QRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGT 426
+R + L D SG+ V TLWG+ +K Q PV+++K +V+DF G+S+
Sbjct: 349 AKRNIYLMDMSGKVVTTTLWGEDADKFDGSRQ--------PVMAIKGARVSDFGGRSLSV 400
Query: 427 IPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQIKNEGL 485
+ S+ + +NPD EA++LR WFDS G+ VSIS + G G N KT+ + K+E L
Sbjct: 401 LSSSTVIVNPDIPEAYKLRGWFDSEGQALDGVSISDHRSGGAGGGNTNWKTLHEAKSENL 460
Query: 486 GRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDE 544
G+ +K D+ + A + F++ ++ Y ACP + CNKKV Q ++C++C++E
Sbjct: 461 GQGDKADYFSTVAAVVFLRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCDREFPN 516
Query: 545 CDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVF 604
YR +L A I D WVT FQES E ILG +Y+ + + +++ F E+ ++ F
Sbjct: 517 FKYRMILSANIADFQENQWVTCFQESAEAILG--QNTMYLGELKEKNEQAFEEVFQNANF 574
Query: 605 NQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSF 651
+ FR+++K E Y DE R+K TV+ V++ R L+ I K+
Sbjct: 575 RSFTFRIRVKLETYNDESRIKATVMDVKPVDFRDYGRRLIANIRKNM 621
>gi|18390321|ref|NP_080929.1| replication protein A 70 kDa DNA-binding subunit isoform 2 [Mus
musculus]
gi|81879403|sp|Q8VEE4.1|RFA1_MOUSE RecName: Full=Replication protein A 70 kDa DNA-binding subunit;
Short=RP-A p70; AltName: Full=Replication factor A
protein 1; Short=RF-A protein 1
gi|17512293|gb|AAH19119.1| Replication protein A1 [Mus musculus]
gi|74139176|dbj|BAE38476.1| unnamed protein product [Mus musculus]
gi|74139822|dbj|BAE31755.1| unnamed protein product [Mus musculus]
gi|74178123|dbj|BAE29849.1| unnamed protein product [Mus musculus]
gi|74195120|dbj|BAE28302.1| unnamed protein product [Mus musculus]
gi|74195944|dbj|BAE30530.1| unnamed protein product [Mus musculus]
gi|74222487|dbj|BAE38134.1| unnamed protein product [Mus musculus]
gi|148680853|gb|EDL12800.1| replication protein A1 [Mus musculus]
Length = 623
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 218/649 (33%), Positives = 354/649 (54%), Gaps = 65/649 (10%)
Query: 21 KPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQVKKGSVVQLID 77
KP++QV++I+ I G+ RYR L+SD ++T + MLATQLN V+ GQ+ V Q+
Sbjct: 22 KPILQVINIRPISTGNRSPRYRLLMSDGLNTLSSFMLATQLNTLVEGGQLASNCVCQVHK 81
Query: 78 YICSTVQN-RKIIVVLNMETIILDCE----PIGNPKIFSES---ELTAQKTIPSNNLPQP 129
+I +T+++ RK++V++++E ++ E IGNP ++E + Q+ +P P
Sbjct: 82 FIVNTLKDGRKVVVLMDLE-VMKSAEDVGLKIGNPVPYNEGYGQQQQQQQQQQQQAVPSP 140
Query: 130 VRVNNYSA----PNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQP 185
A P +G+ + ++ F P P+ G+
Sbjct: 141 ASAATPPASKPQPQNGSLGMGSTAAKAYGASKPFGKPAGTGLLQPSGGT----------- 189
Query: 186 PYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKV 245
++++PIA+L PYQ +W I ARVT K +R ++N+RG+GK+
Sbjct: 190 -------------------QSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKL 230
Query: 246 FSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFL 305
FS +L+D + GEIR T FN VD+F+ +IEV +VY SKG+LK A K F+ +KN++E+
Sbjct: 231 FSLELVD-ESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGALKIANKQFSAVKNDYEMTF 289
Query: 306 EATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGM 364
++V C E+ +P QF F I ++ES +++VD+IGI S S+ I ++ N
Sbjct: 290 NNETSVLPC-EDGHHLPTVQFDFTGIGDLESKAKDALVDIIGICKSYEDSIKITVKSNNR 348
Query: 365 ETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI 424
E +R + L D SG+ V TLWG+ +K Q PV+++K +V+DF G+S+
Sbjct: 349 EVAKRNIYLMDMSGKVVTTTLWGEDADKFDGSRQ--------PVMAIKGARVSDFGGRSL 400
Query: 425 GTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQIKNE 483
+ S+ + +NPD EA++LR WFDS G+ VSIS + G G N KT+ + K+E
Sbjct: 401 SVLSSSTVIVNPDIPEAYKLRGWFDSEGQALDGVSISDHRSGGAGGGNTNWKTLHEAKSE 460
Query: 484 GLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEI 542
LG+ +K D+ + A + F++ ++ Y ACP + CNKKV Q ++C++C++E
Sbjct: 461 NLGQGDKADYFSTVAAVVFLRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCDREF 516
Query: 543 DECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSR 602
YR +L A I D WVT FQES E ILG +Y+ + + +++ F E+ ++
Sbjct: 517 PNFKYRMILSANIADFQENQWVTCFQESAEAILG--QNTMYLGELKEKNEQAFEEVFQNA 574
Query: 603 VFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSF 651
F + FR+++K E Y DE R+K TV+ V++ R L+ I K+
Sbjct: 575 NFRSFTFRIRVKLETYNDESRIKATVMDVKPVDFRDYGRRLIANIRKNM 623
>gi|348505238|ref|XP_003440168.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Oreochromis niloticus]
Length = 606
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 215/660 (32%), Positives = 350/660 (53%), Gaps = 77/660 (11%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDR 61
L+ +I ++ G S ++Q+++I+ + G+ R+R ++SD T + ML+TQLN
Sbjct: 4 LSEGTIEALSNGTSVSDAVLQLVNIRKLDGGNGPSRFRVMMSDGRHTLSSFMLSTQLNHM 63
Query: 62 VKTGQVKKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCEP-------IGNPKIFSES 113
+ + + L ++ + +++ R+++++L ++ I +P IG+P ++E
Sbjct: 64 AEENILAPNCICNLKRHVTNILKDGRRVVIILEIDVI----KPAKDVAGRIGDPTPYTEG 119
Query: 114 ELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
+ ++ P + P++ N +N G
Sbjct: 120 QSKGPQSAPVPEIRPPLQPQN-----------RNEGEL---------------------- 146
Query: 174 SIVRSFQPTVQPPYQPPPNFRNHGPILKNEAP---ARIIPIAALNPYQGRWAIKARVTAK 230
QPP +F P + P ++++PIA+LNPYQ +W I+ARVT K
Sbjct: 147 ---------WQPPSSSAQDFGKKAPSVMPNTPGGSSKVVPIASLNPYQSKWTIRARVTNK 197
Query: 231 GDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPA 290
+R ++N+RGDGK+FS +++D + GEIRVT FN VD+F+ +IE G+VY ISKGSLK A
Sbjct: 198 SAIRTWSNSRGDGKLFSMEIVD-ESGEIRVTGFNQEVDKFFSLIEAGKVYYISKGSLKIA 256
Query: 291 QKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVI 350
K + +KN++E+ L ST+ C + D +P Q F IS++E+ + ++IVDVIG+
Sbjct: 257 NKQYTSVKNDYEMTLNGESTIIPCEDSCD-VPMVQCDFVSISDLENRDKDAIVDVIGVCK 315
Query: 351 SVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLS 410
SV+ + K+ E +R L+L D SG+ V +TLWG+ E +K D PV++
Sbjct: 316 SVDDITRLTTKSNREVSKRTLSLMDMSGKVVTVTLWGE----EAEKF----DGSSQPVIA 367
Query: 411 VKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAK 470
+K K++DF G+S+ S+ L INPD EA++LR W+D G S++ G
Sbjct: 368 IKGAKLSDFGGRSLSASFSSTLMINPDIPEAYKLRGWYDKEGHAMDGQSLTEVKGGSGGG 427
Query: 471 NEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QS 529
N K+++ +K E LG +K D+ T A I F++ ++ Y ACP + CNKKV Q
Sbjct: 428 NTNWKSLADVKTEHLGHGDKADYYTCVATIVFLRKENCLYQACP----SQDCNKKVVDQQ 483
Query: 530 GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYEL 589
++C++C++E YR +L A I D WVT FQES E ILG A L LK
Sbjct: 484 NGMFRCEKCDKEFPNFKYRLILSANIADYGDNQWVTCFQESAEAILGQNAAYLGQLKD-- 541
Query: 590 QDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
++ F E+ + FN ++FR ++K E Y DE R+K TV+ V++ S+ L+ I K
Sbjct: 542 SNEAAFDEVFQHANFNTFVFRNRVKLETYNDESRIKATVMDVKPVDHKEYSKRLILNIRK 601
>gi|344290276|ref|XP_003416864.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit
[Loxodonta africana]
Length = 603
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 223/650 (34%), Positives = 357/650 (54%), Gaps = 68/650 (10%)
Query: 16 GDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQVKKGSV 72
GD + KP++QV++I+ I G++ RYR L+SD V+T + MLATQLN V+ ++ +
Sbjct: 4 GDTSIKPILQVINIRPITTGNSPPRYRLLMSDGVNTLSSFMLATQLNPLVEEERLSSNCI 63
Query: 73 VQLIDYICSTVQN-RKIIVVLNMETIILDCEP----IGNPKIFSESELTAQKTIPSNNLP 127
Q+ +I +T+++ R++++++ +E ++ E IGNP ++E Q+ +P+
Sbjct: 64 CQINRFIVNTLKDGRRVVILMELE-VLKSAEAVGLKIGNPVPYNEGH-GQQQVVPT---- 117
Query: 128 QPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPY 187
P S ++P + + N S + S V Y
Sbjct: 118 ----------------------------PASAASPPTSKPQQQNGSSGMGSI---VSKAY 146
Query: 188 QPPPNF-RNHGPILKNEA---PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDG 243
P F + G L N A ++++PIA+L PYQ +W I ARVT K +R ++N+RG+G
Sbjct: 147 GAPKTFGKAGGTSLVNTAGGTQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEG 206
Query: 244 KVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI 303
K+FS +L+D + GEIR T FN D+F+ +IEV +VY SKG+LK A K F +KN++E+
Sbjct: 207 KLFSIELVD-ESGEIRATAFNEQADKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEM 265
Query: 304 FLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK-N 362
++V C E+ +P QF F I ++E+ +S+VD+IG+ S + I+ K N
Sbjct: 266 TFNNETSVMPC-EDGHHLPTMQFDFTGIDDLENKSKDSLVDIIGVCKSYEDATKIVVKSN 324
Query: 363 GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK 422
E +R + L D SG+ V TLWG+ +K Q PV+++K +V+DF G+
Sbjct: 325 NREVSKRNIYLMDMSGKVVSATLWGEDADKFDGTRQ--------PVMAIKGARVSDFGGR 376
Query: 423 SIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQIK 481
S+ + S+ + +NPD EA++LR WFDS G+ VSIS + G G N KT+ ++K
Sbjct: 377 SLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQALDGVSISDLKSGGIGGSNTNWKTLYEVK 436
Query: 482 NEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQ 540
+E LG+ +K D+ + A + +++ ++ Y ACP + CNKKV Q ++C++C+
Sbjct: 437 SENLGQGDKADYFSCVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCDS 492
Query: 541 EIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIR 600
E YR +L A I D WVT FQES E ILG A L LK +++ F E+ +
Sbjct: 493 EFPNFKYRMILAANIADFLENQWVTCFQESAEAILGQSAAYLGELKE--KNEQAFEEVFQ 550
Query: 601 SRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
+ F + FR++IK E Y DE R+K +V+ V+Y R L+ I K+
Sbjct: 551 NASFRSFTFRIRIKLETYNDESRIKASVVDVKPVDYREYGRRLIVSIRKN 600
>gi|225457192|ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
1 [Vitis vinifera]
Length = 625
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 219/665 (32%), Positives = 357/665 (53%), Gaps = 61/665 (9%)
Query: 1 MPVNLTPNSISLI--NGGDVNSKPL----VQVMDIKLIGSTQERYRFLISDSVSTQHAML 54
M ++TPN IS I N +S L VQV+D+ IG+ RY+F +D AM
Sbjct: 1 MAKSITPNGISTILSNPSPDSSTELPEIIVQVIDLTPIGN---RYKFTANDGKMKLKAMF 57
Query: 55 ATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESE 114
+ + + +G ++ ++Q+IDY + + +++ I+ CE + +P + E +
Sbjct: 58 PSSFSSEINSGNIQNLGLIQVIDYTLNDIPSKQ-----EKYLIVTKCEAV-SPALEVEFK 111
Query: 115 LTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGS 174
T K+ + L +P +V +Q T +G F P
Sbjct: 112 -TEVKSEETGILLRPKQV----------VEIQRE----------VKTEGTGIFLKPKQEI 150
Query: 175 IVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLR 234
+ +S V + N P + R+ P+ +LNPYQG W IK R+T KG +R
Sbjct: 151 VAKSAAQIVNEQHG------NMAPAARMAMTRRVHPLVSLNPYQGNWTIKVRLTNKGTMR 204
Query: 235 RYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNF 294
Y NARG+G VF+ +L D DG +I+ T FN +FYE ++G+VY ISKG+LK A K F
Sbjct: 205 TYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFQLGKVYYISKGALKVANKQF 264
Query: 295 NHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAEN-NSIVDVIGIVISVN 353
++N++E+ L S V+ + E+ IP+ +F F I E+ N +VDVIG+V SV+
Sbjct: 265 KTVQNDYEMTLNENSEVEEASNEETFIPEAKFKFVEIEELGPYVNGKELVDVIGVVQSVS 324
Query: 354 PSVPILRKNGME-TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVK 412
P++ I RK+ + +R + + D + ++V ++LW D GQ+L + D FP++++K
Sbjct: 325 PTMSIRRKSNNDIVPKRDITIADKTKKTVVVSLWNDHATNVGQELLDNADK--FPIVAIK 382
Query: 413 SGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREI---AAGGA 469
S KV DF G S+ T+ + + +NPD E+ +LR W+DS GK A+ SI +I + GG
Sbjct: 383 SLKVGDFQGVSLSTLSKSIVLVNPDTPESKKLRSWYDSEGKGASMASIGSDISPSSKGGV 442
Query: 470 KNEIHKTVSQ---IKNEGLGRSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKK 525
K+ + VS N LG +KP + ++RA+I+FIK D + Y AC + CNKK
Sbjct: 443 KSMYYDRVSLSHVTSNPSLGE-DKPSFFSIRAYISFIKPDQTMWYRAC------KTCNKK 495
Query: 526 VTQS-GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYM 584
VT + G+ + C+ C + DEC RY++ ++ D +G W++ F E E + GC A EL
Sbjct: 496 VTDAIGSGYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLFNEQAERMFGCSADELDK 555
Query: 585 LKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
LK + ++ F + ++ ++ +LFR+ + + Y +E+R +IT V++++ESR LL
Sbjct: 556 LKSQEGEENLFQQKLKEAIWVPHLFRISVAQHEYMNEKRQRITARAVVPVDFAAESRLLL 615
Query: 645 DLISK 649
+ ISK
Sbjct: 616 EEISK 620
>gi|426383460|ref|XP_004058298.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit
[Gorilla gorilla gorilla]
Length = 648
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 224/651 (34%), Positives = 348/651 (53%), Gaps = 91/651 (13%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD N KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ Q+
Sbjct: 75 AIMQKGDTNIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEEQL 134
Query: 68 KKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCEP----IGNPKIFSESELTAQKTIP 122
V Q+ +I +T+++ R++++++ +E ++ E IGNP ++E ++
Sbjct: 135 SSNCVCQIHRFIVNTLKDGRRVVILMELE-VLKSAEAVGVKIGNPVPYNEGSTVSKV--- 190
Query: 123 SNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPT 182
Y A S TF S S + GT Q
Sbjct: 191 ------------YGA----------SKTFGKAAGPSLSHTSGGT-------------QSK 215
Query: 183 VQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGD 242
V P IA+L PYQ +W I ARVT K +R ++N+RG+
Sbjct: 216 VVP-------------------------IASLTPYQSKWTICARVTNKSQIRTWSNSRGE 250
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE 302
GK+FS +L+D + GEIR T FN VD+F+ +IEV +VY SKG+LK A K F +KN++E
Sbjct: 251 GKLFSLELVD-ESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYE 309
Query: 303 IFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRK 361
+ ++V C E+D +P QF F I ++E+ +S+VD+IGI S + I +R
Sbjct: 310 MTFNNETSVMPC-EDDHHLPTVQFDFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRS 368
Query: 362 NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG 421
N E +R + L DTSG+ V TLWG+ +K Q PVL++K +V+DF G
Sbjct: 369 NNREVAKRNIYLMDTSGKVVTATLWGEDADKFDGSRQ--------PVLAIKGARVSDFGG 420
Query: 422 KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQI 480
+S+ + S+ + NPD EA++LR WFD+ G+ VSIS + G G N KT+ ++
Sbjct: 421 RSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQALDGVSISDLKSGGVGGSNTNWKTLYEV 480
Query: 481 KNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCN 539
K+E LG+ +KPD+ + A + +++ ++ Y ACP + CNKKV Q ++C++C+
Sbjct: 481 KSENLGQGDKPDYFSSVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCD 536
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEII 599
E YR +L I D WVT FQES E ILG A L LK +++ F E+
Sbjct: 537 TEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELKD--KNEQAFEEVF 594
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
++ F ++FR+++K E Y DE R+K TV+ V+Y R L+ I +S
Sbjct: 595 QNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVMSIRRS 645
>gi|334324842|ref|XP_001371635.2| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Monodelphis domestica]
Length = 868
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 219/666 (32%), Positives = 357/666 (53%), Gaps = 72/666 (10%)
Query: 1 MPVNLTPNSISLI-NGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLAT 56
M L+ +I LI GD KP++QV++I+ I G++ RYR L+SD ++T + MLAT
Sbjct: 126 MSGRLSEGAIGLIMQQGDTTIKPILQVINIRPIATGNSPPRYRMLMSDGLNTVSSFMLAT 185
Query: 57 QLNDRVKTGQVKKGSVVQLIDYICSTVQ-NRKIIVVLNMETIILDCE---PIGNPKIFSE 112
QLN V+ ++ + Q+ +I +T++ RK+++++++E + E IGNP ++E
Sbjct: 186 QLNVLVEEERLSSNCICQVNRFIVNTLKFGRKVVILMDLEVLQSADEVGGKIGNPVPYNE 245
Query: 113 SELTAQKT---IPSNN--LPQPVRVNNYSAPNS-GTFNLQNSGTFNSQNPGSFSTPNSGT 166
+ Q P+ N +P + N S S T + S TF + STP
Sbjct: 246 GQGQQQAAPAPSPATNPVATKPQQQNGSSGLGSTATKSFGGSKTFGKVGNANLSTPGGSQ 305
Query: 167 FRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKAR 226
+ ++PIA+LNPYQ +W I AR
Sbjct: 306 LK---------------------------------------VVPIASLNPYQSKWTICAR 326
Query: 227 VTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS 286
VT K +R ++N+RG+GK+FS +++D + GEIR T FN VD+F+ +I+V +VY SKG+
Sbjct: 327 VTNKSQIRTWSNSRGEGKLFSIEMVD-ESGEIRATAFNDQVDKFFPLIDVNKVYYFSKGT 385
Query: 287 LKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVI 346
LK A K F +KN++E+ ++V LC E+ +P QF F I ++E+ +S+VD+I
Sbjct: 386 LKIANKQFTAVKNDYEMTFNNETSVVLC-EDAHHLPTVQFDFTVIGDLENKAKDSLVDII 444
Query: 347 GIVISV-NPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGF 405
G+ S + S +++ + E +R ++L DTSG+ V TLWG+ ++ D
Sbjct: 445 GVCKSYEDASKVVVKSSNREVSKRNVHLMDTSGKVVTTTLWGEDADR--------FDGSR 496
Query: 406 FPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIA 465
PVL++K +V+DF G+S+ + S+ + +NPD EA +LR WFDS G+ VSIS
Sbjct: 497 QPVLAIKGARVSDFGGRSLSVLSSSTILVNPDIPEAFKLRGWFDSEGQALEVVSISDARG 556
Query: 466 AG-GAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNK 524
G G N KT+ + K+E LG+ +K D+ + + +++ ++ Y ACP + CNK
Sbjct: 557 GGMGGSNTNWKTLYEAKSENLGQGDKADYFSCVGTVVYLRKENCMYQACP----SQDCNK 612
Query: 525 KVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELY 583
KV Q ++C++C++E YR +L I D WVT FQES E ILG Y
Sbjct: 613 KVIDQQNGLYRCEKCDREFPSFKYRMILSVNIADFQENQWVTCFQESAEAILG--QNTAY 670
Query: 584 MLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYL 643
+ + + +++ F E+ ++ F Y F++++K E Y DE R+K +V+ V+Y + L
Sbjct: 671 LGELKDKNEQAFEEVFQNANFRSYTFKIRVKLETYNDESRIKASVLDVKPVDYREYGKRL 730
Query: 644 LDLISK 649
+ I K
Sbjct: 731 IMNIRK 736
>gi|395536318|ref|XP_003770167.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit
[Sarcophilus harrisii]
Length = 607
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 211/645 (32%), Positives = 350/645 (54%), Gaps = 57/645 (8%)
Query: 16 GDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQVKKGSV 72
GD + KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ ++ +
Sbjct: 4 GDTSIKPILQVINIRPIATGNSPPRYRMLMSDGLNTVSSFMLATQLNVLVEEERLSSNCI 63
Query: 73 VQLIDYICSTVQ-NRKIIVVLNMETIILDCE---PIGNPKIFSESELTAQKTIPSNNLPQ 128
Q+ YI +T++ RK+++++++E + E IGNP ++E + Q P
Sbjct: 64 CQVNRYIVNTLKFGRKVVILMDLEVLQSADEVGGKIGNPVPYNEGQGQQQAAPAPAPGPA 123
Query: 129 PVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQ 188
V +G+ L ++ T + +F S P +
Sbjct: 124 ANPVATKPQQQNGSSGLGSTATKSYGVSKTFGKVGSTNLSTPGGSQL------------- 170
Query: 189 PPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSF 248
+++PIA+LNPYQ +W I ARVT K +R ++N+RG+GK+FS
Sbjct: 171 ------------------KVVPIASLNPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSI 212
Query: 249 DLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEAT 308
+++D + GEIR T FN VD+F+ +I+V +VY SKG+LK A K F +KN++E+
Sbjct: 213 EMVD-ESGEIRATAFNDQVDKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNE 271
Query: 309 STVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV-NPSVPILRKNGMETQ 367
++V LC E+ +P QF F I ++E+ +S+VD+IG+ S + S +++ + E
Sbjct: 272 TSVVLC-EDAHHLPTVQFDFTVIGDLENKAKDSLVDIIGVCKSYEDASKVVVKSSNREVS 330
Query: 368 RRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTI 427
+R ++L DTSG+ V TLWG+ ++ Q PVL++K +V+DF G+S+ +
Sbjct: 331 KRNIHLMDTSGKVVTTTLWGEEADRFDGSRQ--------PVLAIKGARVSDFGGRSLSVL 382
Query: 428 PSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQIKNEGLG 486
S+ + +NPD EA +LR WFDS G+ VSIS G G N KT+ +K+E LG
Sbjct: 383 SSSTMLVNPDIPEAFKLRGWFDSEGQALEAVSISDARGGGTGGSNANWKTLYDVKSENLG 442
Query: 487 RSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDEC 545
+ +K D+ + A + +++ ++ Y ACP + CNKKV Q ++C++C++E
Sbjct: 443 QGDKADYFSCVATVVYLRKENCMYQACP----SQDCNKKVIDQQNGLYRCEKCDREFPSF 498
Query: 546 DYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFN 605
YR +L I D WVT FQES E ILG Y+ + + +++ F E+ ++ F
Sbjct: 499 KYRMILSVNIADFQENQWVTCFQESAEAILG--QNTAYLGELKDKNEQAFEEVFQNANFR 556
Query: 606 QYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
Y F++++K E Y DE R+K +V+ V+Y + L+ I K+
Sbjct: 557 SYTFKIRVKLETYNDESRIKASVVDVKPVDYREYGKRLIMNIRKN 601
>gi|240849249|ref|NP_001155361.1| replication protein A 70 kDa DNA-binding subunit [Ovis aries]
gi|238815019|gb|ACR56706.1| replication protein A1 [Ovis aries]
Length = 616
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 218/651 (33%), Positives = 351/651 (53%), Gaps = 72/651 (11%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD + KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ Q+
Sbjct: 12 AIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEEQL 71
Query: 68 KKGSVVQLIDYICSTVQNRKIIVVLNMETIILDC-----EPIGNPKIFSESELTAQKTIP 122
+ Q+ +I +T+++ + +V+L ME +L IGNP ++E Q+ +
Sbjct: 72 SSNCICQINRFIVNTLKDGRRVVIL-MEVEVLKSAEAVGSKIGNPVPYNEGH--GQQPVV 128
Query: 123 SNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPN-----SGTFRAPNAGSIVR 177
+ + +G+ PG ST + S TF S V
Sbjct: 129 PPPVSAASPPTSRPQQQNGS-------------PGVASTASKAFGASKTFGKAGGTSQVN 175
Query: 178 SFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYN 237
S T A+++PIA+L PYQ +W I ARVT K +R ++
Sbjct: 176 SSGGT----------------------QAKVVPIASLTPYQSKWTICARVTNKSQIRTWS 213
Query: 238 NARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHL 297
N+RG+GK+FS +L+D + GEIR T FN D+F+ +I+V +VY SKG+LK A K F +
Sbjct: 214 NSRGEGKLFSIELVD-ESGEIRATAFNEQADKFFPLIDVNKVYYFSKGTLKIANKQFTAV 272
Query: 298 KNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVP 357
KN++E+ ++V C E+ +P QF F I ++ES +S+VD+IGI +
Sbjct: 273 KNDYEMTFNNETSVMPC-EDGRHLPTVQFDFTGIGDLESKSKDSLVDIIGICKNYEDVTK 331
Query: 358 I-LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKV 416
I ++ N E +R + L D SG+ V TLWGD +K Q PV+++K +V
Sbjct: 332 ITVKSNNREVSKRNIYLMDMSGKVVNATLWGDDADKFDGSRQ--------PVMAIKGARV 383
Query: 417 NDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGA--KNEIH 474
+DF G+S+ + S+ + +NPD EA++LR WFDS G+ +SIS ++ +GGA N
Sbjct: 384 SDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQALDGISIS-DLKSGGAGGSNTNW 442
Query: 475 KTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRW 533
KT+ ++K+E LG+ +KPD+ + A + +++ ++ Y ACP + CNKKV Q +
Sbjct: 443 KTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLY 498
Query: 534 QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDV 593
+C++C+ E YR +L I D WVT FQES E ILG Y+ + + +++
Sbjct: 499 RCEKCDSEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILG--QNTAYLGELKEKNEQ 556
Query: 594 RFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
F E+ ++ F + FR+++K E Y DE R+K TV+ V+Y R L+
Sbjct: 557 AFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVVDVKPVDYKEYGRRLV 607
>gi|291405375|ref|XP_002719090.1| PREDICTED: replication protein A1 [Oryctolagus cuniculus]
Length = 613
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 221/645 (34%), Positives = 354/645 (54%), Gaps = 60/645 (9%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD + +P++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ ++
Sbjct: 9 AILQQGDTSIQPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEERL 68
Query: 68 KKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCE-----PIGNPKIFSESELTAQKTIP 122
+ Q+ +I +T+++ + +V+L ME +L IGNP ++E Q
Sbjct: 69 SSNCICQVNRFIVNTLKDGRRVVIL-MEVEVLKSAEAVGMKIGNPVPYNEGHGQQQA--- 124
Query: 123 SNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPT 182
LP PV SAP S Q +G+ P S S S F S++ + T
Sbjct: 125 ---LPPPVTA--ASAPASKP--QQQNGSAGMGPPVSKSFGASKAFGKSGGSSLLNTAGGT 177
Query: 183 VQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGD 242
++++PIA+L PYQ +W I ARVT K +R ++N+RG+
Sbjct: 178 ----------------------QSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGE 215
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE 302
GK+FS +L+D + GEIR T FN VD+F+ +IEV +VY SKG+LK A K F +KN++E
Sbjct: 216 GKLFSIELVD-ESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYE 274
Query: 303 IFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRK 361
+ ++V C E+ +P QF+F I +E+ +S+VD+IGI S + I ++
Sbjct: 275 MTFVNETSVMPC-EDGHHLPTVQFAFTGIDALENKPKDSLVDIIGICKSYEDATKITVKS 333
Query: 362 NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG 421
N E +R + L DTSG+ V TLWG+ ++ D PVL++K +V+DF G
Sbjct: 334 NNREVAKRNIYLMDTSGKVVTATLWGEDADR--------FDGSRQPVLAIKGARVSDFGG 385
Query: 422 KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQI 480
+S+ + S+ + +NPD EA++LR WFDS G+ VSIS + G G N KT+ ++
Sbjct: 386 RSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQALDGVSISDLKSGGMGGSNTNWKTLYEV 445
Query: 481 KNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCN 539
K+E LG+ +K D+ + A + +++ ++ Y ACP + CNKKV Q ++C++C+
Sbjct: 446 KSENLGQGDKADYFSSVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCD 501
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEII 599
E YR +L I D WVT FQES E ILG Y+ + + +++ F E+
Sbjct: 502 SEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILG--QNTAYLGELKEKNEQAFEEVF 559
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
++ F + FR+++K E Y DE R+K TV+ V+Y +R L+
Sbjct: 560 QNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDYREHARRLI 604
>gi|427789109|gb|JAA60006.1| Putative replication factor a 1 rfa1 replication factor a 1 rfa1
[Rhipicephalus pulchellus]
Length = 600
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 228/662 (34%), Positives = 358/662 (54%), Gaps = 80/662 (12%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLIGS-TQERYRFLISDSVSTQ-HAMLATQL 58
M LT ++ I KP++QV++ K I S T +RYR L+SD V +AML TQL
Sbjct: 1 MENRLTAGAVERILNNQQVDKPVLQVLNFKPISSNTADRYRLLLSDGVQCHTYAMLGTQL 60
Query: 59 NDRVKTGQVKKGSVVQLIDYICSTVQ-NRKIIVVLNMETI----ILDCEPIGNPKIFSES 113
N + ++ K +VVQL Y+C+ V ++K+++VL++ I + C +G+P I + S
Sbjct: 61 NGMITNNEIDKFAVVQLDKYMCNVVSPDKKVLIVLDLTVIAKGSTVGCR-LGSPVIPASS 119
Query: 114 ELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
AQ T N P P++ QNS AP+A
Sbjct: 120 SGAAQPTDGGANKP-PLQ--------------QNSA-------------------APSAA 145
Query: 174 SIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDL 233
P+F N + + ++PIA+L PYQ RW I+ARVT K +
Sbjct: 146 -----------------PSFGNRA-YPASTSDVVVVPIASLTPYQNRWTIRARVTNKSGI 187
Query: 234 RRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQK- 292
R ++N++G+GK+FS DLLD + GEIR T FNA DRFY++IEV +VY IS+ +K +K
Sbjct: 188 RNWSNSKGEGKLFSMDLLD-ESGEIRATAFNAECDRFYDVIEVNKVYYISRAVIKNVKKG 246
Query: 293 -NFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVIS 351
+F+ +KN++E+ L + +T+ C + +IP QF+F IS ++ +S++DVIG+ S
Sbjct: 247 YSFSSIKNDFEMSLISETTITPCDDVTPNIPTLQFNFVPISRLQEISKDSVIDVIGVCKS 306
Query: 352 VNPSVPILRKN-GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLS 410
+ + R+ E ++R ++L D SG V LTLWGD E D PV++
Sbjct: 307 ASDVQTVTRRTTSQELKKRDVSLVDRSGTEVSLTLWGD--------QAEKFDGSDNPVVA 358
Query: 411 VKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAK 470
VK +V+DFSG S+ I S+ L +NPD E+H L W+ G T S+S +
Sbjct: 359 VKGARVSDFSGVSLSLISSSMLQVNPDIPESHALMGWYSREGTLLQTHSLSTQRGGPMGG 418
Query: 471 NEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT--Q 528
N K+++Q K EGLG+ +KPD+ +V+A ++ I+ ++ Y ACP CNKKV Q
Sbjct: 419 NANWKSIAQAKAEGLGQGDKPDYYSVKACVSIIRKENCLYKACP----SENCNKKVVDLQ 474
Query: 529 SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL-YMLKY 587
+G ++C++C QE E +R L+ A + D + WVT F + E ++G A++L M
Sbjct: 475 TG-YYRCEKCAQETMEFKWRLLVSANLTDFSDGQWVTCFGKEAETLIGASAEDLGEMYSN 533
Query: 588 ELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
++D R+ +I+ F ++FRL+ K E+Y DE R+K +V+ V+Y ++ LL I
Sbjct: 534 SSKEDSRYEDILNDVPFKPFIFRLRTKMEVYNDESRLKTSVMSVSPVDYIEYTKKLLKDI 593
Query: 648 SK 649
++
Sbjct: 594 AE 595
>gi|149053388|gb|EDM05205.1| replication protein A1 [Rattus norvegicus]
Length = 583
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 223/661 (33%), Positives = 359/661 (54%), Gaps = 90/661 (13%)
Query: 1 MPVNLTPNSIS-LINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLAT 56
M +L+ +I+ ++ GD + KP++QV++I+ I G++ RYR L+SD ++T + MLAT
Sbjct: 1 MVGHLSEGAIAAIMQQGDTSIKPVLQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT 60
Query: 57 QLNDRVKTGQVKKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCE---PIGNPKIFSE 112
QLN V+ GQ+ V Q+ +I +T+++ R++++++++E + E IGNP ++E
Sbjct: 61 QLNALVEGGQLASNCVCQVHRFIVNTLKDGRRVVILMDLEVVKSAGEVGVKIGNPVPYNE 120
Query: 113 SELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNA 172
A+ S +P +GT LQ P SGT
Sbjct: 121 GSTVAKAYGASKPFGKP----------AGTGLLQ---------------PTSGT------ 149
Query: 173 GSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGD 232
++++PIA+L PYQ +W I ARVT K
Sbjct: 150 --------------------------------QSKVVPIASLTPYQSKWTICARVTNKSQ 177
Query: 233 LRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQK 292
+R ++N+RG+GK+FS +L+D + GEIR T FN VD+F+ +IEV +VY SKG+LK A K
Sbjct: 178 IRTWSNSRGEGKLFSIELVD-ESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANK 236
Query: 293 NFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV 352
F+ +KN++E+ ++V C E+ +P QF F I ++ES +S+VD+IGI S
Sbjct: 237 QFSAVKNDYEMTFNNETSVLPC-EDGHHLPTVQFDFTGIGDLESKSKDSLVDIIGICKSY 295
Query: 353 NPSVPI-LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSV 411
+ I ++ N E +R + L D SG+ V TLWG+ +K Q PV+++
Sbjct: 296 EDATKITVKSNNREVAKRNICLMDMSGKVVTATLWGEDADKFDGSRQ--------PVMAI 347
Query: 412 KSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAK 470
K +V+DF G+S+ + S+ + +NPD EA++LR WFDS G+ VSIS + G G
Sbjct: 348 KGARVSDFGGRSLSVLSSSTVLVNPDIPEAYKLRGWFDSEGQALDGVSISDLRSGGTGGS 407
Query: 471 NEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QS 529
N KT+ + K+E LG+ +K D+ + A + F++ ++ Y ACP + CNKKV Q
Sbjct: 408 NTNWKTLYEAKSENLGQGDKADYFSTVATVVFLRKENCMYQACPT----QDCNKKVIDQQ 463
Query: 530 GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYEL 589
++C++C++E YR +L I D WVT FQES E ILG +Y+ + +
Sbjct: 464 NGLYRCEKCDREFPNFKYRMILSVNIADFQENQWVTCFQESAEAILG--QNTVYLGELKE 521
Query: 590 QDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+++ F E+ ++ F + FR+++K E Y DE R+K TVI V+Y S+ L+ I K
Sbjct: 522 KNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVIDVKPVDYRDYSKRLIMNIRK 581
Query: 650 S 650
+
Sbjct: 582 N 582
>gi|440912313|gb|ELR61897.1| Replication protein A 70 kDa DNA-binding subunit [Bos grunniens
mutus]
Length = 616
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 216/651 (33%), Positives = 354/651 (54%), Gaps = 72/651 (11%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD + KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ ++
Sbjct: 12 AIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEERL 71
Query: 68 KKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCEP----IGNPKIFSESELTAQKTIP 122
+ Q+ +I +T+++ R++++++ +E ++ E IGNP ++E Q+ +
Sbjct: 72 SSNCICQINRFIVNTLKDGRRVVILMELE-VLKSAEAVGSKIGNPVPYNEGH--GQQPVV 128
Query: 123 SNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPN-----SGTFRAPNAGSIVR 177
+ + +G+ PG ST + S TF S V
Sbjct: 129 PPPVSAASPPTSRPQQQNGS-------------PGMASTASKAFGASKTFGKAGGTSQVN 175
Query: 178 SFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYN 237
S T A+++PIA+L PYQ +W I ARVT K +R ++
Sbjct: 176 SSGGT----------------------QAKVVPIASLTPYQSKWTICARVTNKSQIRTWS 213
Query: 238 NARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHL 297
N+RG+GK+FS +L+D + GEIR T FN D+F+ +I+V +VY SKG+LK A K F +
Sbjct: 214 NSRGEGKLFSIELVD-ESGEIRATAFNEQADKFFPLIDVNKVYYFSKGTLKIANKQFTAV 272
Query: 298 KNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVP 357
KN++E+ ++V C E+ +P QF F I ++ES +S+VD+IGI +
Sbjct: 273 KNDYEMTFNNETSVMPC-EDGHHLPTVQFDFTGIGDLESKSKDSLVDIIGICKNYEDVTK 331
Query: 358 ILRK-NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKV 416
I+ K N E +R + L D SG+ V TLWGD +K Q PV+++K +V
Sbjct: 332 IIVKSNNREVSKRNIYLMDMSGKVVNATLWGDDADKFDGSRQ--------PVMAIKGARV 383
Query: 417 NDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGA--KNEIH 474
+DF G+S+ + S+ + +NPD EA++LR WFDS G+ +SIS ++ +GGA N
Sbjct: 384 SDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQALDGISIS-DLKSGGAGGSNTNW 442
Query: 475 KTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRW 533
KT+ ++K+E LG+ +KPD+ + A + +++ ++ Y ACP + CNKKV Q +
Sbjct: 443 KTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLY 498
Query: 534 QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDV 593
+C++C+ E YR +L I D WVT FQES E ILG Y+ + + +++
Sbjct: 499 RCEKCDSEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILG--QSTAYLGELKEKNEQ 556
Query: 594 RFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
F E+ ++ F + FR+++K E Y DE R+K TV+ V+Y R L+
Sbjct: 557 AFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVVDVKPVDYREYGRRLV 607
>gi|432889884|ref|XP_004075379.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Oryzias latipes]
Length = 598
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 221/656 (33%), Positives = 349/656 (53%), Gaps = 75/656 (11%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDR 61
L+ +I + G ++ ++Q+++I+ I GS R+R ++SD T + ML+TQLN
Sbjct: 4 LSEGAIEALANGTGGNEAILQLVNIRKIDGGSGPSRFRVMMSDGRHTLSSFMLSTQLNCM 63
Query: 62 VKTGQVKKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCE---PIGNPKIFSESELTA 117
+ + + V L ++ + +++ R+++++L +E I E +G+P ++E A
Sbjct: 64 AEENILAQNCVCLLKRHVTNVLKDGRRVVIILEIEVIKPAGEVGGKLGDPVPYNE----A 119
Query: 118 QKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVR 177
QK + P P + N LQ P V+
Sbjct: 120 QKGVSQ---PAPAQENR--------LPLQ-----------------------PQNKIEVK 145
Query: 178 SFQPTVQPPYQPPPNFRNHGPILKNEAP---ARIIPIAALNPYQGRWAIKARVTAKGDLR 234
SF +F P+ P ++++PIA+LNPYQ +W I+ARVT K +R
Sbjct: 146 SFNR----------DFGKKAPLAMPSTPGGSSKVVPIASLNPYQSKWTIRARVTNKSGIR 195
Query: 235 RYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNF 294
++N+RGDGK+FS +L+D + GEIRVT FN VD+F+ +IEVG+VY ISKGSLK A K +
Sbjct: 196 TWSNSRGDGKLFSMELVD-ESGEIRVTGFNQEVDKFFSLIEVGKVYYISKGSLKIANKQY 254
Query: 295 NHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNP 354
+KN++E+ L ST+ C E D +P Q F I ++ES + ++IVDVIG+ SV+
Sbjct: 255 TSVKNDYEMTLNGESTILPCEESGD-VPMMQCDFVPIGDLESRDKDAIVDVIGVCKSVDE 313
Query: 355 SVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSG 414
+ K E +R L+L D SG+ V +TLWG+ E +K D P++++K
Sbjct: 314 VTRLTTKTNREVSKRSLSLMDMSGKLVTVTLWGE----EAEKF----DGSGQPIVAIKGA 365
Query: 415 KVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIH 474
K++DF G+S+ S+ L INPD EA++LR W+D G S++ G +
Sbjct: 366 KLSDFGGRSLSASFSSTLMINPDIPEAYKLRGWYDKDGHAVEGQSLTELKGGSGGGSTNW 425
Query: 475 KTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRW 533
KT+S +KNE LG EK D+ + A + +++ ++ Y ACP ++ CNKKV Q +
Sbjct: 426 KTLSDLKNEHLGHGEKADYYSCIATVVYLRKENCLYQACP----NQDCNKKVIDQHNGMF 481
Query: 534 QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDV 593
+C++C++E YR +L A I D WVT FQES E ILG A L LK ++
Sbjct: 482 RCEKCDKEFPNFKYRLILSANIADYGDNQWVTCFQESAEAILGQNAAYLGQLKD--SNES 539
Query: 594 RFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
F E+ + F ++FR ++K E Y DE R+K TV+ V++ + L+ I K
Sbjct: 540 AFDEVFQQANFKTFVFRNRVKLETYNDESRIKATVMDLKPVDHKDYIKSLIVNIRK 595
>gi|357120348|ref|XP_003561889.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Brachypodium distachyon]
Length = 635
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 216/664 (32%), Positives = 355/664 (53%), Gaps = 55/664 (8%)
Query: 4 NLTPNSISLINGGDVNSKP------LVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQ 57
++TP+++++I P +VQV+D+K +GST R+ F+ SD + AML T
Sbjct: 5 SVTPDALAIILANRSPESPEDVPEIVVQVVDLKPLGSTGTRFTFMASDGKAKMKAMLPTN 64
Query: 58 LNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIG---NPKIFSESE 114
V +G ++ +V+++ Y C+ + L+ II CE + + +I SE +
Sbjct: 65 FASEVNSGNLQNLGLVRILHYTCNDIPK-----TLSKCLIITKCEVVAQALDAEINSEVK 119
Query: 115 LTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGS 174
+ + + +PV + T + + SQ G S +A
Sbjct: 120 SEEEPVVLAKPKEEPVVL---------TKRTEEAEIMPSQTGGGPSATVQKRQHVKSASQ 170
Query: 175 IVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLR 234
I+ + N P + R+ P+ +LNPYQG W IK RVT+KG+LR
Sbjct: 171 IISEERG-------------NAAPAARLAITRRVHPLISLNPYQGNWVIKVRVTSKGNLR 217
Query: 235 RYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNF 294
Y NARG+G VF+ +L D DG +I+ T FN +FY + E+G+VY ISKGSL+ A K F
Sbjct: 218 TYRNARGEGHVFNVELTDEDGTQIQATMFNEAAKKFYPMFELGKVYYISKGSLRVANKQF 277
Query: 295 NHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEI-ESAENNSIVDVIGIVISVN 353
++N++E+ L + V+ E + IP Q++F I + +VD+IG+V SV+
Sbjct: 278 KTVQNDYEMTLNENAVVEEA-EGESFIPPVQYNFVKIDHLGPYVGGRELVDIIGVVQSVS 336
Query: 354 PSVPILRKNGMET-QRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVK 412
P++ I RK ET +R + + D S ++V +TLW D G++L +MVD PV++VK
Sbjct: 337 PTLSIRRKIDNETIPKRDIVVADDSNKTVTVTLWNDLATTIGEQLLDMVDSA--PVIAVK 394
Query: 413 SGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAA---GGA 469
S KV+DF G S+ T+ + L INP+ EA +LR W++S GK + S+ ++ A GG+
Sbjct: 395 SLKVSDFQGVSVSTVGKSTLVINPELPEADKLRTWYESEGKGTSMASVGADMGASRTGGS 454
Query: 470 KNEIHKTV--SQIKNEGLGRSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKKV 526
++ V S I ++ +KP + ++ A+I+ IK D + Y AC + CNKKV
Sbjct: 455 RSMYSDRVFLSHITSDPNLGQDKPVFFSLNAYISHIKPDQTMWYRAC------KTCNKKV 508
Query: 527 TQS-GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYML 585
T++ G+ + C+ C + +EC RY++ ++ D TG W++ F + E I+GC A EL
Sbjct: 509 TEAVGSGYWCEGCQKNYEECMLRYIMAIKVSDPTGEAWLSLFNDQAERIVGCSADELDRS 568
Query: 586 KYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLD 645
+ E DD F ++ + +LFR+ + + Y E+R +ITV V+Y++E+R+LL+
Sbjct: 569 RKEEGDD-SFLLRLKEATWVPHLFRVSVSQNEYMGEKRQRITVRSESPVDYAAEARFLLE 627
Query: 646 LISK 649
I+K
Sbjct: 628 EIAK 631
>gi|62751648|ref|NP_001015732.1| replication protein A 70 kDa DNA-binding subunit [Xenopus
(Silurana) tropicalis]
gi|82194954|sp|Q5FW17.1|RFA1_XENTR RecName: Full=Replication protein A 70 kDa DNA-binding subunit;
Short=RP-A p70; AltName: Full=Replication factor A
protein 1; Short=RF-A protein 1
gi|58477644|gb|AAH89665.1| MGC107891 protein [Xenopus (Silurana) tropicalis]
gi|89269807|emb|CAJ81527.1| replication protein A1 [Xenopus (Silurana) tropicalis]
gi|115312915|gb|AAI23969.1| MGC107891 protein [Xenopus (Silurana) tropicalis]
gi|213624489|gb|AAI71175.1| MGC107891 protein [Xenopus (Silurana) tropicalis]
gi|213625713|gb|AAI71177.1| MGC107891 protein [Xenopus (Silurana) tropicalis]
Length = 609
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 224/659 (33%), Positives = 355/659 (53%), Gaps = 68/659 (10%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQ 57
+PV L+ +IS I GGD + KP +QV++I+ I G+ RYR L+SD ++T + MLATQ
Sbjct: 3 LPV-LSEGAISAILGGDSSCKPTLQVINIRSINTGNGPPRYRLLMSDGLNTLSSFMLATQ 61
Query: 58 LNDRVKTGQVKKGSVVQLIDYICSTVQN-RKIIVVLNMETII---LDCEPIGNPKIFSES 113
LN V + + Q+ +I + +++ R++I+V+ ME + L IGNP +++
Sbjct: 62 LNFLVDNNLLATNCICQVSRFIVNNLKDGRRVIIVMEMEVLKSADLVKGKIGNPHPYNDG 121
Query: 114 ELTAQKTIPSNNLPQPV-RVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNA 172
+ Q P+ P + N SAP + N S F
Sbjct: 122 QGPPQPAAPAPASAPPPSKPQNISAPPPPSMNRGASKLFG-------------------G 162
Query: 173 GSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGD 232
GS+V + + ++++PIA+LNPYQ +W ++ARVT KG
Sbjct: 163 GSVVNT----------------------PGGSQSKVVPIASLNPYQSKWTVRARVTNKGQ 200
Query: 233 LRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQK 292
+R ++N+RG+GK+FS +++D + GEIR T FN D+F+ +IEV +VY SKG+LK A K
Sbjct: 201 IRTWSNSRGEGKLFSIEMVD-ESGEIRATAFNEQADKFFSLIEVNKVYYFSKGTLKIANK 259
Query: 293 NFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV 352
+ +KN++E+ + ++V C + D +P QF F I E+ES ++++D+IGI +
Sbjct: 260 QYTSVKNDYEMTFNSETSVIPCDDSAD-VPMVQFEFVPIGELESKNKDTVLDIIGICKNA 318
Query: 353 NPSVPI-LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSV 411
+ +R N E +R +NL D+SG+ V TLWG+ +K Q PV+++
Sbjct: 319 EEVTKVTIRSNNREVSKRNINLMDSSGKVVSTTLWGEDADKFDGSRQ--------PVVAI 370
Query: 412 KSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKN 471
K +++DF G+S+ + S+ + INPD EA +LR WFDS G+ SIS G N
Sbjct: 371 KGARLSDFGGRSLSVLSSSTVMINPDIPEAFKLRAWFDSEGQVVEGTSISESRGGTGGGN 430
Query: 472 EIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSG 530
K++ ++K E LG EK D+ T A I +++ ++ Y ACP + CNKKV Q
Sbjct: 431 TNWKSLLEVKTENLGHGEKADYFTSVATIVYLRKENCLYQACP----SQDCNKKVIDQQN 486
Query: 531 NRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQ 590
++C++C++E YR +L A I D W+T FQES E ILG A L LK +
Sbjct: 487 GLFRCEKCDKEFPNYKYRLILSANIADFGENQWITCFQESAESILGQNATYLGELKE--K 544
Query: 591 DDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
++ + E+ ++ F Y FR+++K E Y DE R+K T + V++ SR L+ I K
Sbjct: 545 NEQAYDEVFQNANFRSYTFRIRVKLETYNDESRIKATAMDVKPVDHKEYSRRLIMNIRK 603
>gi|297733862|emb|CBI15109.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 213/665 (32%), Positives = 347/665 (52%), Gaps = 84/665 (12%)
Query: 1 MPVNLTPNSISLI--NGGDVNSKPL----VQVMDIKLIGSTQERYRFLISDSVSTQHAML 54
M ++TPN IS I N +S L VQV+D+ IG+ RY+F +D AM
Sbjct: 1 MAKSITPNGISTILSNPSPDSSTELPEIIVQVIDLTPIGN---RYKFTANDGKMKLKAMF 57
Query: 55 ATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESE 114
+ + + +G ++ ++Q+IDY + + +++ I+ CE + +P + E +
Sbjct: 58 PSSFSSEINSGNIQNLGLIQVIDYTLNDIPSKQ-----EKYLIVTKCEAV-SPALEVEFK 111
Query: 115 LTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGS 174
++T G F P
Sbjct: 112 TEVKRT--------------------------------------------GIFLKPKQEI 127
Query: 175 IVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLR 234
+ +S V + N P + R+ P+ +LNPYQG W IK R+T KG +R
Sbjct: 128 VAKSAAQIVNEQHG------NMAPAARMAMTRRVHPLVSLNPYQGNWTIKVRLTNKGTMR 181
Query: 235 RYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNF 294
Y NARG+G VF+ +L D DG +I+ T FN +FYE ++G+VY ISKG+LK A K F
Sbjct: 182 TYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFQLGKVYYISKGALKVANKQF 241
Query: 295 NHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAEN-NSIVDVIGIVISVN 353
++N++E+ L S V+ + E+ IP+ +F F I E+ N +VDVIG+V SV+
Sbjct: 242 KTVQNDYEMTLNENSEVEEASNEETFIPEAKFKFVEIEELGPYVNGKELVDVIGVVQSVS 301
Query: 354 PSVPILRKNGME-TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVK 412
P++ I RK+ + +R + + D + ++V ++LW D GQ+L + D FP++++K
Sbjct: 302 PTMSIRRKSNNDIVPKRDITIADKTKKTVVVSLWNDHATNVGQELLDNADK--FPIVAIK 359
Query: 413 SGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREI---AAGGA 469
S KV DF G S+ T+ + + +NPD E+ +LR W+DS GK A+ SI +I + GG
Sbjct: 360 SLKVGDFQGVSLSTLSKSIVLVNPDTPESKKLRSWYDSEGKGASMASIGSDISPSSKGGV 419
Query: 470 KNEIHKTVSQ---IKNEGLGRSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKK 525
K+ + VS N LG +KP + ++RA+I+FIK D + Y AC + CNKK
Sbjct: 420 KSMYYDRVSLSHVTSNPSLGE-DKPSFFSIRAYISFIKPDQTMWYRAC------KTCNKK 472
Query: 526 VTQS-GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYM 584
VT + G+ + C+ C + DEC RY++ ++ D +G W++ F E E + GC A EL
Sbjct: 473 VTDAIGSGYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLFNEQAERMFGCSADELDK 532
Query: 585 LKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
LK + ++ F + ++ ++ +LFR+ + + Y +E+R +IT V++++ESR LL
Sbjct: 533 LKSQEGEENLFQQKLKEAIWVPHLFRISVAQHEYMNEKRQRITARAVVPVDFAAESRLLL 592
Query: 645 DLISK 649
+ ISK
Sbjct: 593 EEISK 597
>gi|405970353|gb|EKC35267.1| Replication protein A 70 kDa DNA-binding subunit [Crassostrea
gigas]
Length = 624
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 214/644 (33%), Positives = 343/644 (53%), Gaps = 40/644 (6%)
Query: 18 VNSKPLVQVMDIKLIGSTQERYRFLISDS-VSTQHAMLATQLNDRVKTGQVKKGSVVQLI 76
++S L I GS+ +RYR L+SD VS HAMLATQLN + G++ +V+Q+
Sbjct: 6 LSSGALESSKKITAQGSSADRYRLLLSDGEVSYSHAMLATQLNS-LMDGELDNLAVIQVD 64
Query: 77 DYICSTVQ-NRKIIVVLNMETIILDCE---PIGNPKIFSESELTAQKTIPSNNLPQPVRV 132
Y+C+T+Q +R+++++L++ + E IGNP+ + + Q T + PQ +
Sbjct: 65 KYLCNTIQGDRRVMILLDLHVLQRGSEVGQRIGNPQQYKAA--ATQGTTAEHRNPQQYK- 121
Query: 133 NNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNS--GTFRAPNAGSIVR--SFQPTVQPPYQ 188
++ + GT NS Q P S GT + ++ + + Y
Sbjct: 122 ---ASASQGTTAEHNSAQCPPQMPKQEGGGQSFIGTVSDKQVNNNIKKENMNGNSKGGYS 178
Query: 189 PPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSF 248
N P +R+ I +L PYQ RW I+ARVT K +R ++N+RG+GK+FS
Sbjct: 179 LKTNNSGGTP----GGTSRVHKIDSLTPYQNRWKIRARVTQKSGIRTWSNSRGEGKLFSV 234
Query: 249 DLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEAT 308
L D D EIR T FN VD+FYE++EV +VY SK +LK A K + ++N++E+
Sbjct: 235 TLTD-DSAEIRATGFNDAVDKFYELLEVNKVYYFSKATLKTANKQYTTVQNDYEMTFNPD 293
Query: 309 STVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGM-ETQ 367
+ ++ C ++D S+P F+F I+E+ES S++DVIG+V + I+ K E
Sbjct: 294 TIIEPC-DDDSSLPTMNFNFVKINELESKAPTSLIDVIGVVKNCGDVTTIIGKQSQKEIT 352
Query: 368 RRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTI 427
+R L + D SG SV LTLWG + Q+ D PV++VK KV+D+ G+S+ +
Sbjct: 353 KRDLQIVDQSGMSVNLTLWG----ADAQQF----DGSGHPVIAVKGAKVSDYGGRSLSAM 404
Query: 428 PSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIH-KTVSQIKNEGLG 486
S+Q+ NPD E H L+ WF+ G N + GG + K ++IK+E +G
Sbjct: 405 ASSQIIHNPDLREGHMLKGWFEHDGHNMDFHGYKNDGMGGGGGGSTNWKCFAEIKSENIG 464
Query: 487 RSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDEC 545
++KP++ T +A + F++ ++ Y ACP CNKKV GN ++C++C +E
Sbjct: 465 -ADKPEYFTTKATVLFLRKENCMYQACPT----ESCNKKVVDQGNGMYRCEKCAREFPNY 519
Query: 546 DYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFN 605
+R +L A + D + WVT FQES E +LG A +L LK ++ F ++ F
Sbjct: 520 KWRMILSANLGDYSDNQWVTCFQESAEAMLGIKADDLGALKDS--NEQAFDQVFTEACFK 577
Query: 606 QYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
Y+F+ + K E Y DE R+K + A +++ +S+ L++ I K
Sbjct: 578 SYIFKFRAKVETYNDESRLKTVTMNASTIDFKEQSQRLIEEIKK 621
>gi|198416884|ref|XP_002127939.1| PREDICTED: similar to MGC107891 protein [Ciona intestinalis]
Length = 607
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 215/638 (33%), Positives = 346/638 (54%), Gaps = 70/638 (10%)
Query: 3 VNLTPNSISLINGGDVNSKPLVQVMDIKLI-GSTQERYRFLISDSV-STQHAMLATQLND 60
+ LT ++ + GD S P++Q + K + G ER + +SD V S ML T LN
Sbjct: 5 IALTHGAVQALLRGDEVSNPVLQCLSFKKVQGPNIERIKLALSDGVHSFGTVMLGTNLNH 64
Query: 61 RVKTGQVKKGSVVQLIDYIC-STVQN-RKIIVVLNMETIILD---CEPIGNPKIFSESEL 115
V G + S+V+L Y VQN +K+I+ L+++ + E IGNP ++++
Sbjct: 65 LVNDGILDANSIVRLTHYQSPKMVQNGKKVIICLSLDVVQSGNEVGERIGNPVNYAQASA 124
Query: 116 TAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSI 175
+ + + NL PN QN R P S
Sbjct: 125 NDGRAVQNENLK----------PN--------------QN------------RMP--ASA 146
Query: 176 VRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRR 235
++S +PT + + + P R++PI +L PYQ +WAI+ARVT KG +R
Sbjct: 147 MQSPKPTGKMSF----GGKGDAPTTPGGTQTRVMPIGSLTPYQNKWAIRARVTQKGAMRE 202
Query: 236 YNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFN 295
+ NARG+GK+FSF +LD D G+I+VTCF D+F+ ++EVG+V+ I+ +LKPA +N
Sbjct: 203 WKNARGEGKLFSFTVLD-DSGDIKVTCFKEEADKFFSMVEVGKVFCIANATLKPANPQYN 261
Query: 296 HLKNEWEIFLEATSTVDLCTEEDDS--IPKQQFSFRHISEIESAENNSIVDVIGIVISV- 352
+++E+ L + + L +E+DD+ +PK Q++F+ ISE+ + N++VD IGI+ S
Sbjct: 262 STTHDYEMTLRRDTVITL-SEDDDAKLVPKIQYNFKKISELGN-HVNTLVDTIGILKSAE 319
Query: 353 NPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVK 412
+ S ++R E + R +NL D S +++TLWG +E +K V+ +K
Sbjct: 320 DLSSVMIRSQNREAKVRKINLVDESNAEIQVTLWG----QEAEKFTSEESA----VVVLK 371
Query: 413 SGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNE 472
S KV+DF G S+ TI ST + INPD EA L++W+++GGK+ AT ++ GG
Sbjct: 372 SAKVSDFGGCSMSTIGSTTVTINPDIPEAFSLKQWYETGGKSQATQVLTTGSGGGGNMAA 431
Query: 473 IHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN- 531
KT++ IK E LG EKPD++TV+A + + K ++ Y ACP + QCNKKV N
Sbjct: 432 NWKTLADIKTENLGTKEKPDYITVKATVLYCKKENILYQACP----NDQCNKKVVDLQNG 487
Query: 532 RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQD 591
++C++CN E YR +L + D+ TWVT FQ+ E +L A++L LK +
Sbjct: 488 SYRCEKCNSESPNFKYRVILNMHMADEFDSTWVTCFQDQAEILLNMTAQQLGDLKD--TN 545
Query: 592 DVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVI 629
+ + ++S F Y F+L++K + + DE+R ++T++
Sbjct: 546 EQEYEAALKSVDFKSYFFKLRVKSDKFNDEERTRVTIM 583
>gi|242041767|ref|XP_002468278.1| hypothetical protein SORBIDRAFT_01g042890 [Sorghum bicolor]
gi|241922132|gb|EER95276.1| hypothetical protein SORBIDRAFT_01g042890 [Sorghum bicolor]
Length = 623
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 226/677 (33%), Positives = 356/677 (52%), Gaps = 94/677 (13%)
Query: 4 NLTPNSISLI----NGGDVNSKP--LVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQ 57
++TP ++S I + G + P +VQV+D+K IG T R+ F+ +D AM T
Sbjct: 6 SVTPGAVSHILAHPSTGSDGAVPDLVVQVLDLKSIG-TGSRFSFMATDGKDKIKAMFPTS 64
Query: 58 LNDRVKTGQVKKGSVVQLIDYICSTVQ--NRKIIVVLNMETIILDCEPIGNPKIFSESEL 115
V++G +K +++++DY C+ V N K++ I++ CE L
Sbjct: 65 FASEVRSGNLKNLGLIRILDYTCNAVNGNNGKVL-------IVIKCE------------L 105
Query: 116 TAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTP-NSGTFRAPNAGS 174
Q + + +G + P P + G A A +
Sbjct: 106 VCQ-----------------------ALDAEINGEAKKEEPPIVLKPKDEGVVVAEQANA 142
Query: 175 IVRSFQPTVQPPY--QPPPNFRNHGPILK----NEAPA-------RIIPIAALNPYQGRW 221
PP +P ++ I+ N APA R+ P+ LNPYQG W
Sbjct: 143 ----------PPVAIKPKQELKSASQIVNEQRGNAAPAARLSMTRRVHPLITLNPYQGNW 192
Query: 222 AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYL 281
IK RVT+KG+LR Y NARG+G VF+ +L D DG +I+ T FN +FY I E+G+VY
Sbjct: 193 VIKVRVTSKGNLRTYRNARGEGCVFNVELTDEDGTQIQATMFNEAAKKFYPIFELGKVYY 252
Query: 282 ISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIES-AENN 340
+SKGSL+ A K F ++N++E+ L + V+ E + IP+ Q++F I + +
Sbjct: 253 VSKGSLRIANKQFKTVQNDYEMSLNENAIVEE-AEGETFIPQVQYNFVKIDHLGTYVGGR 311
Query: 341 SIVDVIGIVISVNPSVPILRKNGMET-QRRILNLKDTSGRSVELTLWGDFCNKEGQKLQE 399
+VD+IG+V SV+P++ + RK ET +R + + D SG++V ++LW D GQ+L +
Sbjct: 312 ELVDIIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVSISLWNDLATTTGQELLD 371
Query: 400 MVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVS 459
MVD PV+++KS KV+DF G S+ TI + L INPD EA ++ W+DS GK+ +
Sbjct: 372 MVDSS--PVVAIKSLKVSDFQGVSLSTIGRSTLAINPDLPEAQNVKSWYDSEGKDTSLAP 429
Query: 460 ISREIA---AGGAKNEIHKTV--SQIKNEGLGRSEKPDWVTVRAFITFIKSD-SFCYTAC 513
I E+ AGG K+ V S I ++ EKP + ++ A I+ IK D + Y AC
Sbjct: 430 IGAEMGAARAGGLKSMYSDRVFLSHITSDPAMGQEKPVFFSLNAIISHIKPDQNMWYRAC 489
Query: 514 PLMIGDRQCNKKVTQS-GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGE 572
+ CNKKVT++ G+ + C+ C + EC RY++ +I D TG WV+ F E E
Sbjct: 490 ------KTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVLKISDPTGEAWVSVFNEHAE 543
Query: 573 EILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRAD 632
+I+GC A EL ++ E DD + ++ + +LFR+ + + Y +E+R +ITV
Sbjct: 544 KIIGCSADELDRIRKEEGDDSYILK-LKEATWVPHLFRVSVTQHEYMNEKRQRITVRSEA 602
Query: 633 QVNYSSESRYLLDLISK 649
V+Y++ES+YLL+ I+K
Sbjct: 603 PVDYAAESKYLLEEIAK 619
>gi|359320313|ref|XP_003639310.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Canis lupus familiaris]
Length = 616
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 213/644 (33%), Positives = 347/644 (53%), Gaps = 58/644 (9%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ G+ + KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ Q+
Sbjct: 12 AIMQQGETSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEEQL 71
Query: 68 KKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEP----IGNPKIFSESELTAQKTIPS 123
+ Q+ +I +T+++ + +V+L I+ E IGNP ++E Q
Sbjct: 72 SSNCICQINRFIVNTLKDGRRVVILMELNILKSAEAVGLKIGNPVPYNEGHGQQQA---- 127
Query: 124 NNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTV 183
+P PV N A N ++ F + S + S TF P S+ S T
Sbjct: 128 --VPSPVSAANPPANKPQQQNGSSAMGFTA----SKTYSASKTFGKPGGTSLASSSGGT- 180
Query: 184 QPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDG 243
+++PIA+L PYQ +W I ARVT K +R ++N+RG+G
Sbjct: 181 ---------------------QVKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEG 219
Query: 244 KVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI 303
K+FS +L+D + GEIR T FN VD+F+ +I++ +VY ISKG LK A K F +KN++E+
Sbjct: 220 KLFSIELVD-ESGEIRATAFNEQVDKFFPLIDMNKVYYISKGILKIANKQFTAVKNDYEM 278
Query: 304 FLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKN 362
++V C E+ +P QF F I ++ES +S++D+IGI S + I ++ N
Sbjct: 279 TFNNETSVMPC-EDGHHLPTVQFDFTGIGDLESKTKDSLIDIIGICKSYEEATKITVKSN 337
Query: 363 GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK 422
E +R + L D SG+ V TLWG+ ++ Q PV+++K +V+DF G+
Sbjct: 338 NREVSKRNIYLMDMSGKVVTATLWGEDADRFDGSRQ--------PVMAIKGARVSDFGGR 389
Query: 423 SIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISR-EIAAGGAKNEIHKTVSQIK 481
S+ + S+ + +NPD EA++LR WFDS G+ +SIS + G N KT+ ++K
Sbjct: 390 SLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQALDGISISDLKSGGTGGGNTNWKTLYEVK 449
Query: 482 NEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQ 540
+E LG +K D+ + A + +++ ++ Y ACP + CNKKV Q ++C++C+
Sbjct: 450 SENLGHGDKADYFSSVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCDS 505
Query: 541 EIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIR 600
E YR +L I D WVT FQES E I+G Y+ + + +++ F E+ +
Sbjct: 506 EFPSFKYRMILSVNIADFQENQWVTCFQESAEAIIG--QNTAYLGELKEKNEQAFEEVFQ 563
Query: 601 SRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
+ F + FR+++K E Y DE R+K TV+ V+Y R L+
Sbjct: 564 NANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDYREYGRRLI 607
>gi|226531756|ref|NP_001141474.1| uncharacterized protein LOC100273584 [Zea mays]
gi|194704722|gb|ACF86445.1| unknown [Zea mays]
gi|195647462|gb|ACG43199.1| replication protein A 70 kDa DNA-binding subunit [Zea mays]
gi|413956552|gb|AFW89201.1| Replication protein A DNA-binding subunit [Zea mays]
Length = 623
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 225/676 (33%), Positives = 357/676 (52%), Gaps = 92/676 (13%)
Query: 4 NLTPNSISLI-----NGGD-VNSKPLVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQ 57
++TP ++S I G D S +VQV+D+K IG R+ F +D AML T
Sbjct: 6 SVTPGAVSYILAHPSTGSDGAVSDLVVQVLDLKSIG-MGSRFSFTATDGNDKIKAMLPTY 64
Query: 58 LNDRVKTGQVKKGSVVQLIDYICSTVQNR--KIIVVLNMETIILDCEPIGNPKIFSESEL 115
V +G +K +++++DY C++V+ K+++V+ ET+ CE +
Sbjct: 65 FASEVHSGNLKNFGLIRILDYTCNSVKGNADKVLIVVKCETV---CEAL----------- 110
Query: 116 TAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSI 175
+ + +G ++P P + GS+
Sbjct: 111 ----------------------------DAEINGEAKKEDPPIVLKPK-------DEGSV 135
Query: 176 VRSFQPTVQPP--YQPPPNFRNHGPILK----NEAPA-------RIIPIAALNPYQGRWA 222
V + T PP +P ++ I+ N APA R+ P+ LNPYQG W
Sbjct: 136 VA--EETNSPPLVMKPKQEVKSASQIVTEQRGNAAPATRLSMTRRVHPLITLNPYQGNWV 193
Query: 223 IKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLI 282
IK RVT+KG+LR Y NARG+G VF+ +L D DG +I+ T FN +FY I E+G+VY +
Sbjct: 194 IKVRVTSKGNLRTYRNARGEGCVFNVELTDEDGTQIQATMFNEAAKKFYPIFELGKVYYV 253
Query: 283 SKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEI-ESAENNS 341
SKGSL+ A K F +KN++E+ L + V+ E + +P Q++ I ++
Sbjct: 254 SKGSLRIANKQFKTVKNDYELSLNENAIVEEA-EGETFLPPVQYNLVKIDQLGPYVGGRE 312
Query: 342 IVDVIGIVISVNPSVPILRKNGMET-QRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEM 400
+VD++G+V SV+P++ + RK ET +R + + D SG++V ++LW D GQ+L +M
Sbjct: 313 LVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDLATTTGQELLDM 372
Query: 401 VDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSI 460
VD PV+++KS KV+DF G S+ TI + L INPD EA L+ W+DS GK+ + I
Sbjct: 373 VDSS--PVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPI 430
Query: 461 SREIA---AGGAKNEIHKTV--SQIKNEGLGRSEKPDWVTVRAFITFIKSD-SFCYTACP 514
S E+ AGG K+ V S I ++ EKP + ++ A I+ IK D + Y AC
Sbjct: 431 SAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRAC- 489
Query: 515 LMIGDRQCNKKVTQS-GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEE 573
CNKKVT++ G+ + C+ C + EC RY++ ++ D TG WV+ F E E+
Sbjct: 490 -----TTCNKKVTEAFGSGYWCEGCQKNYSECSLRYIMVIKLSDPTGEAWVSVFNEHAEK 544
Query: 574 ILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQ 633
I+GC A EL ++ E DD + ++ + +LFR+ + + Y +E+R +ITV
Sbjct: 545 IIGCSADELDRIRKEEGDD-SYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAP 603
Query: 634 VNYSSESRYLLDLISK 649
V++++ES+YLL+ I+K
Sbjct: 604 VDFAAESKYLLEEIAK 619
>gi|311268067|ref|XP_003131870.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Sus
scrofa]
Length = 616
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 214/651 (32%), Positives = 358/651 (54%), Gaps = 60/651 (9%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD + KP++QV++I+ I G+ RYR L+SD ++T + MLATQLN V+ ++
Sbjct: 12 AIMQQGDTSIKPILQVINIRPITTGNNPPRYRLLMSDGLNTLSSFMLATQLNPLVEEERL 71
Query: 68 KKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCEP----IGNPKIFSESELTAQKTIP 122
+ Q+ +I +T+++ R++++++++E ++ E IGNP ++E Q+ +
Sbjct: 72 SSNCICQINRFIVNTLKDGRRVVILMDLE-VLKSAEAVGVKIGNPVPYNEGH--GQQPVV 128
Query: 123 SNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPT 182
+ + +G+ + G+ S+ G+ S F A S+V S T
Sbjct: 129 PPPVSAASPPTSNPQQQNGSSGV---GSTVSKAYGA-----SKIFGKAGATSVVNSSGGT 180
Query: 183 VQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGD 242
A+++PIA+L PYQ +W I ARVT K +R ++N+RG+
Sbjct: 181 ----------------------QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGE 218
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE 302
GK+FS +L+D + GEIR T FN VD+F+ +I+V +VY SKG+LK A K F +KN++E
Sbjct: 219 GKLFSIELVD-ESGEIRATAFNEQVDKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYE 277
Query: 303 IFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRK 361
+ ++V C E+ +P QF F I+++E+ +S+VD+IGI + I ++
Sbjct: 278 MTFSNETSVMPC-EDGHHLPTVQFDFTGIADLENKSKDSLVDIIGICKNYEDVTKITVKS 336
Query: 362 NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG 421
E +R + L D SG+ V TLWG+ +K Q PV+++K +V+DF G
Sbjct: 337 TNREVSKRNIYLMDMSGKVVNATLWGEDADKFDGSRQ--------PVMAIKGARVSDFGG 388
Query: 422 KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQI 480
+S+ + S+ + +NPD EA++LR WFDS G+ VSIS + G G N KT+ ++
Sbjct: 389 RSLSILSSSTVIVNPDIPEAYKLRGWFDSEGQALDGVSISDLKSGGIGGSNTNWKTLYEV 448
Query: 481 KNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCN 539
K+E LG+ +KPD+ + A + +++ ++ Y ACP + CNKKV Q ++C++C+
Sbjct: 449 KSENLGQGDKPDYFSAVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCD 504
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEII 599
E YR +L I D WVT FQES E ILG Y+ + + +++ F E+
Sbjct: 505 SEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILG--QSTAYLGELKEKNEQAFEEVF 562
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
++ F + FR+++K E Y DE R+K TV+ V+Y R L+ I K+
Sbjct: 563 QNANFRSFTFRIRVKLETYNDESRIKGTVMDVKPVDYKEYGRRLIMSIRKN 613
>gi|224076356|ref|XP_002197483.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
1 [Taeniopygia guttata]
gi|449479760|ref|XP_004177049.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
2 [Taeniopygia guttata]
Length = 613
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 229/661 (34%), Positives = 358/661 (54%), Gaps = 63/661 (9%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQ 57
M L+ +I+ I G+ SKP++QV++ + I G+ RYR L+SD V+T + MLATQ
Sbjct: 1 MSGRLSEGAIAAIMQGEEVSKPVLQVINTRAIATGTGPPRYRVLMSDGVNTLSSFMLATQ 60
Query: 58 LNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCE----PIGNPKIFSES 113
LN V+ ++ + Q+ +I +++++ + +V+L T++ + PIGNP+ ++E
Sbjct: 61 LNSLVEEERLSARCICQVNRFIVNSLKDGRRVVILMDVTVLQTADQVGGPIGNPQPYNEG 120
Query: 114 ELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
+ + P+ NL S P NL +G P + + AP+
Sbjct: 121 Q-GQRSAAPAGNLAA-------SKPQQQNGNLSGAG------------PAAPKYHAPS-- 158
Query: 174 SIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDL 233
F P P G +K ++PIA+LNPYQ +W I ARVT KG +
Sbjct: 159 ---NQFGKASAPSALKTPG----GSQIK------VVPIASLNPYQSKWTICARVTQKGQI 205
Query: 234 RRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKN 293
R ++N+RG+GK+FS +L+D + GEIR T FN D+F+ +IE+ +VY +KG+LK A K
Sbjct: 206 RTWSNSRGEGKLFSIELVD-ESGEIRATAFNDQADKFFPLIELNKVYYFTKGNLKTANKQ 264
Query: 294 FNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVN 353
+ +KN++EI ++V C ++ +P QF F IS++E+ +SIVDVIGI S
Sbjct: 265 YTAVKNDYEITFTNETSVVPC-DDAQHLPSVQFDFVSISDLENTPKDSIVDVIGICKSYE 323
Query: 354 PSVPILRK-NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVK 412
I+ K N E +R ++L DTSG+ V TLWG+ E D PV+++K
Sbjct: 324 DVTKIVVKANNREVSKRNVHLMDTSGKLVTATLWGNEA--------EQFDGSRQPVIAIK 375
Query: 413 SGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGK--NAATVSISREIAAGGAK 470
+V+DF G+S+ + S+ + INPD EA +LR WFDS G+ A++S R A GA
Sbjct: 376 GARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLECASISDVRGGPAAGA- 434
Query: 471 NEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QS 529
N KT+ + K E LG+ +K D+ + I ++ ++ Y ACP + CNKKV Q
Sbjct: 435 NTNWKTLFEAKAENLGQGDKADYFSCVGTIVHLRKENCMYQACP----SQDCNKKVIDQQ 490
Query: 530 GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYEL 589
++C++C++E YR +L I D WVT FQ++ E ILG A L LK
Sbjct: 491 NGLYRCEKCDREFPNFKYRLMLLVTIADCLEYQWVTCFQDTAEIILGQNAAFLGELKE-- 548
Query: 590 QDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+++ F E+ ++ FN Y FR+++K E Y DE R+K T + VNY S+ L+ I +
Sbjct: 549 KNEQAFEEVFQNANFNTYEFRIRVKLETYNDESRIKATAMDVKPVNYREYSKRLIANIRR 608
Query: 650 S 650
+
Sbjct: 609 N 609
>gi|147901418|ref|NP_001081585.1| replication protein A 70 kDa DNA-binding subunit [Xenopus laevis]
gi|400975|sp|Q01588.1|RFA1_XENLA RecName: Full=Replication protein A 70 kDa DNA-binding subunit;
Short=RP-A p70; AltName: Full=Replication factor A
protein 1; Short=RF-A protein 1; AltName:
Full=Single-stranded DNA-binding protein
gi|65066|emb|CAA47665.1| replication protein A (RPA) [Xenopus laevis]
Length = 609
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 223/655 (34%), Positives = 357/655 (54%), Gaps = 67/655 (10%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDR 61
L+ +IS + GGD + KP +QV++I+ I G+ RYR L+SD ++T + MLATQLN
Sbjct: 6 LSEGAISAMLGGDSSCKPTLQVINIRPINTGNGPPRYRLLMSDGLNTLSSFMLATQLNSL 65
Query: 62 VKTGQVKKGSVVQLIDYICSTVQN-RKIIVVLNMETII---LDCEPIGNPKIFSESELTA 117
V + + Q+ +I + +++ R++I+V+ ++ + L IGNP+ +++ +
Sbjct: 66 VDNNLLATNCICQVSRFIVNNLKDGRRVIIVMELDVLKSADLVMGKIGNPQPYNDGQPQP 125
Query: 118 QKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVR 177
P+ SAP LQN NS P S N GT + GS++
Sbjct: 126 AAPAPA------------SAPAPAPSKLQN----NSAPPPSM---NRGTSKLFGGGSLLN 166
Query: 178 SFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYN 237
+ + ++++PIA+LNPYQ +W ++ARVT KG +R ++
Sbjct: 167 T----------------------PGGSQSKVVPIASLNPYQSKWTVRARVTNKGQIRTWS 204
Query: 238 NARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHL 297
N+RG+GK+FS +++D + GEIR T FN D+F+ IIEV +VY SKG+LK A K + +
Sbjct: 205 NSRGEGKLFSIEMVD-ESGEIRATAFNEQADKFFSIIEVNKVYYFSKGTLKIANKQYTSV 263
Query: 298 KNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVP 357
KN++E+ + ++V C + D +P QF F I E+ES ++++D+IG+ +V
Sbjct: 264 KNDYEMTFNSETSVIPCDDSAD-VPMVQFEFVSIGELESKNKDTVLDIIGVCKNVEEVTK 322
Query: 358 I-LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKV 416
+ ++ N E +R ++L D+SG+ V TLWG+ +K Q PV+++K ++
Sbjct: 323 VTIKSNNREVSKRSIHLMDSSGKVVSTTLWGEDADKFDGSRQ--------PVVAIKGARL 374
Query: 417 NDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISR-EIAAGGAKNEIHK 475
+DF G+S+ + S+ + INPD EA +LR WFDS G+ SIS G N K
Sbjct: 375 SDFGGRSLSVLSSSTVMINPDIPEAFKLRAWFDSEGQVVEGTSISESRGGGTGGGNTNWK 434
Query: 476 TVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQ 534
++ ++KNE LG EK D+ T A I +++ ++ Y ACP + CNKKV Q ++
Sbjct: 435 SLLEVKNENLGHGEKADYFTSVATIVYLRKENCLYQACP----SQDCNKKVIDQQNGLFR 490
Query: 535 CDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVR 594
C++CN+E YR +L A I D W+T FQES E ILG A L LK +++
Sbjct: 491 CEKCNKEFPNFKYRLILSANIADFGENQWITCFQESAESILGQNATYLGELKE--KNEQA 548
Query: 595 FGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+ E+ ++ F Y FR ++K E Y DE R+K T + V++ SR L+ I K
Sbjct: 549 YDEVFQNANFRSYTFRARVKLETYNDESRIKATAVDVKPVDHKEYSRRLIMNIRK 603
>gi|47122884|gb|AAH70559.1| LOC397937 protein [Xenopus laevis]
Length = 607
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 217/655 (33%), Positives = 353/655 (53%), Gaps = 69/655 (10%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDR 61
L+ +IS + GGD + KP +QV++I+ I G+ RYR L+SD ++T + MLATQLN
Sbjct: 6 LSEGAISAMLGGDSSCKPTLQVINIRPIITGNGPPRYRLLMSDGLNTLSSFMLATQLNSL 65
Query: 62 VKTGQVKKGSVVQLIDYICSTVQN-RKIIVVLNMETII---LDCEPIGNPKIFSESELTA 117
V + + Q+ +I + +++ R++I+V+ ++ + L IGNP+ +++ +
Sbjct: 66 VDNNLLATNCICQVSRFIVNNLKDGRRVIIVMELDVLKSADLVMGKIGNPQPYNDGQPQP 125
Query: 118 QKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVR 177
P++ NN + P S N GT + GS++
Sbjct: 126 AAPAPASAPAPSKPQNNSAPPPS---------------------MNRGTSKLFGGGSLLN 164
Query: 178 SFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYN 237
+ + ++++PIA+LNPYQ +W ++ARVT KG +R ++
Sbjct: 165 T----------------------PGGSQSKVVPIASLNPYQSKWTVRARVTNKGQIRTWS 202
Query: 238 NARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHL 297
N+RG+GK+FS +++D + GEIR T FN D+F+ IIEV +VY SKG+LK A K + +
Sbjct: 203 NSRGEGKLFSIEMVD-ESGEIRATAFNEQADKFFSIIEVNKVYYFSKGTLKIANKQYTSV 261
Query: 298 KNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVP 357
KN++E+ + ++V C + D +P QF F I E+ES ++++D+IG+ +V
Sbjct: 262 KNDYEMTFNSETSVIPCDDSAD-VPMVQFEFVSIGELESKNKDTVLDIIGVCKNVEEVTK 320
Query: 358 I-LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKV 416
+ ++ N E +R ++L D+SG+ V TLWG+ +K Q PV+++K ++
Sbjct: 321 VTIKSNNREVSKRSIHLMDSSGKVVSTTLWGEDADKFDGSRQ--------PVVAIKGARL 372
Query: 417 NDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISR-EIAAGGAKNEIHK 475
+DF G+S+ + S+ + INPD EA +LR WFDS G+ SIS G N K
Sbjct: 373 SDFGGRSLSVLSSSTVMINPDIPEAFKLRAWFDSEGQVVEGTSISESRGGGTGGGNTNWK 432
Query: 476 TVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQ 534
++ ++KNE LG EK D+ T A I +++ ++ Y ACP + CNKKV Q ++
Sbjct: 433 SLLEVKNENLGHGEKADYFTSVATIVYLRKENCLYQACP----SQDCNKKVIDQQNGLFR 488
Query: 535 CDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVR 594
C++CN+E YR +L A I D W+T FQES E ILG A L LK +++
Sbjct: 489 CEKCNKEFPNFKYRLILSANIADFGENQWITCFQESAESILGQNATYLGELKE--KNEQA 546
Query: 595 FGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+ E+ ++ F Y FR ++K E Y DE R+K T + V++ SR L+ I K
Sbjct: 547 YDEVFQNANFRSYTFRARVKLETYNDESRIKATAVDVKPVDHKEYSRRLIMNIRK 601
>gi|326435434|gb|EGD81004.1| hypothetical protein PTSG_10947 [Salpingoeca sp. ATCC 50818]
Length = 601
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 220/663 (33%), Positives = 337/663 (50%), Gaps = 87/663 (13%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLI------GSTQERYRFLISDSVSTQH-AMLATQ 57
LTPN+++ I + P+VQ++ IK I G +R+R ISD + + AMLATQ
Sbjct: 4 LTPNAVAAIMRDEGPEDPVVQILTIKKISPGDSKGQKADRFRLTISDGTNKHNSAMLATQ 63
Query: 58 LNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDC-EPIGNPKIFSESELT 116
LN + +V K ++L ++ +TVQ+R II+VL E + D IG+P E
Sbjct: 64 LNPMIVNEEVVKNGAIRLKKFMANTVQDRTIIIVLQAEVVAKDLGSVIGDPVGLGEK--- 120
Query: 117 AQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIV 176
R + S + + ++NP +++P
Sbjct: 121 --------------RKPAPAPAPSAATASRPAAPVKTENP----------YKSP------ 150
Query: 177 RSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRY 236
P P P + + PI +L+PY RW I+ARV +K ++R +
Sbjct: 151 ------------PKPAM----PSMAAASSGAYSPIMSLHPYLHRWTIRARVASKSNVRTW 194
Query: 237 NNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNH 296
NN RG G++FS DL+D D GEIR T FN V D + + EVG+ Y+I G +KPA K FN
Sbjct: 195 NNQRGSGRLFSVDLID-DSGEIRATGFNDVCDSLHPVFEVGKCYVIQGGKIKPANKRFNQ 253
Query: 297 LKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE----SAENNSIVDVIGIVISV 352
L NE+E+ E+ + V L D+ IP+Q+F F+ E+E S E+N DV+ + S+
Sbjct: 254 LNNEYEMQFESDTRVTLDMSADNVIPQQKFDFKSFRELENTPVSRESNVFADVLAVCHSI 313
Query: 353 NPSVPILRK-NGMETQRRILNLKDTSGRSVELTLWG----DFCNKEGQKLQEMVDVGFFP 407
N + I+ K G E +R + L D G S+ TLWG DF G VG
Sbjct: 314 NDADTIITKATGRELTKRDITLLDRDGLSMTCTLWGQDAEDFEKNGGV-------VG--A 364
Query: 408 VLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG 467
VL++K+ +V+D++G+S+ S+ ++INPD EAH L+ W+D G ATV
Sbjct: 365 VLAIKAARVSDYNGRSLSVSQSSTMYINPDNDEAHSLKGWYDMEG---ATVEAKPLTVRN 421
Query: 468 GAKNEIHKTVSQIKNEGLGRSE-KPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKV 526
N +SQIK++ +G + KP++ A +T+IK D+ Y ACP CNKKV
Sbjct: 422 AGGNTTRILLSQIKDDQIGMIDGKPEYFMAVATVTYIKKDNCMYRACP----SDSCNKKV 477
Query: 527 TQSG-NRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYML 585
++G ++C++CN+ +R + I D TG TWVTAFQES E++L ++EL L
Sbjct: 478 IENGPEEYRCEKCNKSYPNFKWRLMTSMSIADATGQTWVTAFQESAEKLLDSTSQELGHL 537
Query: 586 KYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLD 645
D+ F + I F + F+ + K + Y D+ RV+++V+ A VNY E+ +L+
Sbjct: 538 ME--NDEAAFSKKIADAQFRTWRFKCRAKADTYQDDTRVRVSVVDASPVNYVDEAAHLIQ 595
Query: 646 LIS 648
I+
Sbjct: 596 QIN 598
>gi|147778951|emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]
Length = 634
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 218/674 (32%), Positives = 354/674 (52%), Gaps = 70/674 (10%)
Query: 1 MPVNLTPNSISLI--NGGDVNSKPL----VQVMDIKLIGSTQERYRFLISDSVSTQHAML 54
M ++TPN IS I N +S L VQV+D+ IG+ RY+F +D AM
Sbjct: 1 MAKSITPNGISTILSNPSPDSSTELPEIIVQVIDLTPIGN---RYKFTANDGKMKLKAMF 57
Query: 55 ATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESE 114
+ + + +G ++ ++Q+IDY + + +++ I+ CE + +P + E +
Sbjct: 58 PSSFSSEINSGNIQNLGLIQVIDYTLNDIPSKQ-----EKYLIVTKCEAV-SPALEVEFK 111
Query: 115 LTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGS 174
T K+ + L P +V ++ GT G F P
Sbjct: 112 -TEVKSEETGILLXPKQVVEIQX------EVKXEGT--------------GIFLKPKQEI 150
Query: 175 IVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLR 234
+ +S V + N P + R+ P+ +LNPYQG W IK R+T KG +R
Sbjct: 151 VAKSAAQIVNEQHG------NMAPAARMAMTRRVHPLVSLNPYQGNWTIKVRLTNKGTMR 204
Query: 235 RYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNF 294
Y NARG+G VF+ +L D DG +I+ T FN +FYE ++G+VY ISKG+LK A K F
Sbjct: 205 TYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFQLGKVYYISKGALKVANKQF 264
Query: 295 NHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNS----------IVD 344
++N++E+ L S V+ + E+ IP+ +F F I E+ N I D
Sbjct: 265 KTVQNDYEMTLNENSEVEEASNEETFIPEAKFKFVEIEELGPYVNGKELVGPLTSLLIPD 324
Query: 345 VIGIVISVNPSVPILRKNGME-TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDV 403
VIG+V SV+P++ I RK+ + +R + + D + ++V ++LW D GQ+L + D
Sbjct: 325 VIGVVQSVSPTMSIRRKSNNDIVPKRDITIADKTKKTVVVSLWNDHATNVGQELLDNADK 384
Query: 404 GFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISRE 463
FP++++KS KV DF G S+ T+ + + +NPD E+ +LR W+DS GK A+ SI +
Sbjct: 385 --FPIVAIKSLKVGDFQGVSLSTLSKSIVLVNPDTPESKKLRSWYDSEGKGASMASIGSD 442
Query: 464 I---AAGGAKNEIHKTVSQ---IKNEGLGRSEKPDWVTVRAFITFIKSD-SFCYTACPLM 516
I + GG + + VS N LG +KP + ++RA+I+FIK D + Y AC
Sbjct: 443 ISPSSKGGVXSMYYDRVSLSHVTSNPSLGE-DKPSFFSIRAYISFIKPDQTMWYRAC--- 498
Query: 517 IGDRQCNKKVTQS-GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEIL 575
+ CNKKVT + G+ + C+ C + DEC RY++ ++ D +G W++ F E E +
Sbjct: 499 ---KTCNKKVTDAIGSGYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLFNEQAERMF 555
Query: 576 GCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVN 635
GC A EL LK + ++ F + ++ ++ +LFR+ + + Y +E+R +IT V+
Sbjct: 556 GCSADELDKLKSQEGEENLFQQKLKEAIWVPHLFRISVAQHEYMNEKRQRITARAVVPVD 615
Query: 636 YSSESRYLLDLISK 649
+++ESR LL+ ISK
Sbjct: 616 FAAESRLLLEEISK 629
>gi|74214510|dbj|BAE31105.1| unnamed protein product [Mus musculus]
Length = 644
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 218/679 (32%), Positives = 358/679 (52%), Gaps = 86/679 (12%)
Query: 12 LINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQVK 68
+I + + KP++QV++I+ I G+ RYR L+SD ++T + MLATQLN V+ GQ+
Sbjct: 13 MIQQENTSIKPILQVINIRPISTGNRSPRYRLLMSDGLNTLSSFMLATQLNTLVEGGQLA 72
Query: 69 KGSVVQLIDYICSTVQN----------------------RKIIVVLNMETIILDCE---- 102
V Q+ +I +T+++ +K++V++++E ++ E
Sbjct: 73 SNCVCQVHKFIVNTLKDGRMQPKPHGNPYGEQSVLRKLSQKVVVLMDLE-VMKSAEDVGL 131
Query: 103 PIGNPKIFSES---ELTAQKTIPSNNLPQPVRVNNYSA----PNSGTFNLQNSGTFNSQN 155
IGNP ++E + Q+ +P P A P +G+ + ++
Sbjct: 132 KIGNPMPYNEGYGQQQQQQQQQQQQAVPSPASAATPPASKPQPQNGSLGMGSTAAKAYGA 191
Query: 156 PGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALN 215
F P P+ G+ ++++PIA+L
Sbjct: 192 SKPFGKPAGTGLLQPSGGT------------------------------QSKVVPIASLT 221
Query: 216 PYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIE 275
PYQ +W I ARVT K +R ++N+RG+GK+FS +L+D + GEIR T FN VD+F+ +IE
Sbjct: 222 PYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVD-ESGEIRATAFNEQVDKFFPLIE 280
Query: 276 VGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
V +VY SKG+LK A K F+ +KN++E+ ++V C E+ +P QF F I ++E
Sbjct: 281 VNKVYYFSKGALKIANKQFSAVKNDYEMTFNNETSVLPC-EDGHHLPTVQFDFTGIGDLE 339
Query: 336 SAENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEG 394
S +++VD+IGI S S+ I ++ N E +R + L D SG+ V TLWG+ +K
Sbjct: 340 SKAKDALVDIIGICKSYEDSIKITVKSNNREVAKRNIYLMDMSGKVVTTTLWGEDADK-- 397
Query: 395 QKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKN 454
D PV+++K +V+DF G+S+ + S+ + +NPD EA++LR WFDS G+
Sbjct: 398 ------FDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQA 451
Query: 455 AATVSISREIAAG-GAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTAC 513
VSIS + G G N KT+ + K+E LG+ +K D+ + A + F++ ++ Y AC
Sbjct: 452 LDGVSISDHRSGGAGGGNTNWKTLHEAKSENLGQGDKADYFSTVAAVVFLRKENCMYQAC 511
Query: 514 PLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGE 572
P + CNKKV Q ++C++C++E YR +L A I D WVT FQES E
Sbjct: 512 PT----QDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFQENQWVTCFQESAE 567
Query: 573 EILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRAD 632
ILG +Y+ + + +++ F E+ ++ F + FR+++K E Y DE R+K TV+
Sbjct: 568 AILG--QNTMYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVK 625
Query: 633 QVNYSSESRYLLDLISKSF 651
V++ R L+ I K+
Sbjct: 626 PVDFRDYGRRLIANIRKNM 644
>gi|255982530|ref|NP_001157695.1| replication protein A 70 kDa DNA-binding subunit isoform 1 [Mus
musculus]
Length = 644
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 218/679 (32%), Positives = 358/679 (52%), Gaps = 86/679 (12%)
Query: 12 LINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQVK 68
+I + + KP++QV++I+ I G+ RYR L+SD ++T + MLATQLN V+ GQ+
Sbjct: 13 MIQQENTSIKPILQVINIRPISTGNRSPRYRLLMSDGLNTLSSFMLATQLNTLVEGGQLA 72
Query: 69 KGSVVQLIDYICSTVQN----------------------RKIIVVLNMETIILDCE---- 102
V Q+ +I +T+++ +K++V++++E ++ E
Sbjct: 73 SNCVCQVHKFIVNTLKDGRMQPKPHGNPYGEQSVLRKLSQKVVVLMDLE-VMKSAEDVGL 131
Query: 103 PIGNPKIFSES---ELTAQKTIPSNNLPQPVRVNNYSA----PNSGTFNLQNSGTFNSQN 155
IGNP ++E + Q+ +P P A P +G+ + ++
Sbjct: 132 KIGNPVPYNEGYGQQQQQQQQQQQQAVPSPASAATPPASKPQPQNGSLGMGSTAAKAYGA 191
Query: 156 PGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALN 215
F P P+ G+ ++++PIA+L
Sbjct: 192 SKPFGKPAGTGLLQPSGGT------------------------------QSKVVPIASLT 221
Query: 216 PYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIE 275
PYQ +W I ARVT K +R ++N+RG+GK+FS +L+D + GEIR T FN VD+F+ +IE
Sbjct: 222 PYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVD-ESGEIRATAFNEQVDKFFPLIE 280
Query: 276 VGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
V +VY SKG+LK A K F+ +KN++E+ ++V C E+ +P QF F I ++E
Sbjct: 281 VNKVYYFSKGALKIANKQFSAVKNDYEMTFNNETSVLPC-EDGHHLPTVQFDFTGIGDLE 339
Query: 336 SAENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEG 394
S +++VD+IGI S S+ I ++ N E +R + L D SG+ V TLWG+ +K
Sbjct: 340 SKAKDALVDIIGICKSYEDSIKITVKSNNREVAKRNIYLMDMSGKVVTTTLWGEDADK-- 397
Query: 395 QKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKN 454
D PV+++K +V+DF G+S+ + S+ + +NPD EA++LR WFDS G+
Sbjct: 398 ------FDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQA 451
Query: 455 AATVSISREIAAG-GAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTAC 513
VSIS + G G N KT+ + K+E LG+ +K D+ + A + F++ ++ Y AC
Sbjct: 452 LDGVSISDHRSGGAGGGNTNWKTLHEAKSENLGQGDKADYFSTVAAVVFLRKENCMYQAC 511
Query: 514 PLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGE 572
P + CNKKV Q ++C++C++E YR +L A I D WVT FQES E
Sbjct: 512 PT----QDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFQENQWVTCFQESAE 567
Query: 573 EILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRAD 632
ILG +Y+ + + +++ F E+ ++ F + FR+++K E Y DE R+K TV+
Sbjct: 568 AILG--QNTMYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVK 625
Query: 633 QVNYSSESRYLLDLISKSF 651
V++ R L+ I K+
Sbjct: 626 PVDFRDYGRRLIANIRKNM 644
>gi|149637674|ref|XP_001507100.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit
[Ornithorhynchus anatinus]
Length = 619
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 217/653 (33%), Positives = 356/653 (54%), Gaps = 63/653 (9%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD KP++QV++I+ I G+ RYR L+SD ++T + MLATQLN V+ ++
Sbjct: 12 AIMQQGDSPEKPILQVINIRAISTGNGPNRYRLLMSDGLNTLSSFMLATQLNSLVEEERL 71
Query: 68 KKGSVVQLIDYICSTV-QNRKIIVVLNMETIILDCE---PIGNPKIFSESELTAQKTIPS 123
+ Q+ +I +++ + RK+I+++++E + L E IGNP ++E Q+T P+
Sbjct: 72 STNCICQINRFIVNSLKEGRKVIILMDLEVLKLAEEVGGKIGNPVPYNEGA-GQQQTTPA 130
Query: 124 NNLPQPVRVNNYSAPN--SGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQP 181
P P + S P +G+ L ++GT + SF+ S GS
Sbjct: 131 ---PGPTAIPPASKPQQQNGSSGLGSAGTKSYGPAKSFAKTGSSNLLNTPGGS------- 180
Query: 182 TVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARG 241
++++PIA+L PYQ +W I ARVT K +R ++N+RG
Sbjct: 181 -----------------------HSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRG 217
Query: 242 DGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEW 301
+GK+FS +L+D + GEIR T FN D+F+ +IEV +VY SKGSLK A K F +KN++
Sbjct: 218 EGKLFSIELVD-ESGEIRATAFNDQADKFFPLIEVNKVYYFSKGSLKIANKQFTAVKNDY 276
Query: 302 EIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LR 360
E+ ++V C E+ +P QF F I ++E+ +S+VD+IGI S + I ++
Sbjct: 277 EMTFNNETSVVPC-EDAHHLPTVQFDFTGIGDLENKSKDSLVDIIGICKSYEEANKITVK 335
Query: 361 KNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFS 420
N E +R ++L D SG+ V TLWGD K D PV+++K +V+DF
Sbjct: 336 SNNREVSKRNIHLMDMSGKLVTATLWGDDAEK--------FDGSRQPVMAIKGARVSDFG 387
Query: 421 GKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSIS--REIAAGGAKNEIHKTVS 478
G+S+ + S+ + +NPD EA +LR WFDS GK +SIS R GG + KT+
Sbjct: 388 GRSLSVLSSSTVIMNPDIPEAFKLRGWFDSEGKGLDCISISDLRSGGGGGGSSTNWKTLY 447
Query: 479 QIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDR 537
++K E LG +K ++ + + +++ ++ Y ACP + CNKKV Q ++C++
Sbjct: 448 EVKAENLGHGDKAEYFSCVGTVVYLRKENCMYQACP----SQDCNKKVIDQQNGLYRCEK 503
Query: 538 CNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGE 597
C+ E YR +L A I D WVT FQES E ILG +++ + + +++ F E
Sbjct: 504 CDCEFPNFKYRMILSANIADFQENQWVTCFQESAEAILG--QNTMFLGELKEKNEQAFEE 561
Query: 598 IIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
+ ++ F Y+FR+++K E Y DE R+K +V+ V++ + L+ I ++
Sbjct: 562 VFQNANFRSYVFRIRVKLETYNDESRIKASVMDVKPVDHREYGKRLIANIRRN 614
>gi|149724785|ref|XP_001504393.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Equus
caballus]
Length = 603
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 218/646 (33%), Positives = 359/646 (55%), Gaps = 60/646 (9%)
Query: 16 GDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQVKKGSV 72
GD + KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ ++ +
Sbjct: 4 GDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEERLSSNCI 63
Query: 73 VQLIDYICSTVQN-RKIIVVLNMETIILDCEP----IGNPKIFSESELTAQKTIPSNNLP 127
Q+ +I +T+++ R++++++ +E ++ E IGNP ++E Q+ +PS
Sbjct: 64 CQVNRFIVNTLKDGRRVVILMELE-VLKSAEAVGLKIGNPVPYNEGH-GQQQVVPS---- 117
Query: 128 QPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPY 187
PV ++P + QN G+ + S + S TF S+V S T
Sbjct: 118 -PVSA---ASPPTSKPQPQN-GSSGMGSTVSKAYGASKTFGKAGGASLVNSSGGT----- 167
Query: 188 QPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFS 247
A+++PIA+L PYQ +W I ARVT K +R ++N+RG+GK+FS
Sbjct: 168 -----------------QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFS 210
Query: 248 FDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEA 307
+L+D + GEIR T FN D+F+ +++V +VY SKG+LK A K F +KN++E+
Sbjct: 211 IELVD-ESGEIRATAFNEQADKFFPLLDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNN 269
Query: 308 TSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGMET 366
++V C E+D +P QF F I E+E+ +S+VD+IGI S + I ++ N E
Sbjct: 270 ETSVMPC-EDDHHLPTVQFDFTGIGELENKPKDSLVDIIGICKSYEDATKITVKSNNREV 328
Query: 367 QRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGT 426
+R + L DTSG+ V TLWG+ ++ Q PV+++K +V+DF G+S+
Sbjct: 329 SKRNIYLMDTSGKVVTTTLWGEDADRFDGSRQ--------PVMAIKGARVSDFGGRSLSV 380
Query: 427 IPSTQLFINPDFAEAHELREWFDSGGKNAATVSISR-EIAAGGAKNEIHKTVSQIKNEGL 485
+ S+ + +NPD +EA++LR WFDS G+ VSIS + G N KT+ ++K+E L
Sbjct: 381 LSSSTVIMNPDISEAYKLRGWFDSEGQALDGVSISDLKGGGTGGSNTNWKTLYEVKSENL 440
Query: 486 GRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDE 544
G+ +K D+ + A + +++ ++ Y ACP + CNKKV Q ++C++C+ E
Sbjct: 441 GQGDKADYFSSVATVVYLRKENCMYQACP----SQDCNKKVIDQQNGLYRCEKCDSEFPS 496
Query: 545 CDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVF 604
YR +L I D WVT FQES E ILG Y+ + + +++ F E+ ++ F
Sbjct: 497 FKYRMILSVNIADFQENQWVTCFQESAEAILG--QNTAYLGELKEKNEQAFEEVFQNANF 554
Query: 605 NQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
+ FR+++K E + DE R+K TV+ V+Y R L+ I K+
Sbjct: 555 RSFTFRIRVKLETFNDESRIKATVMDVKPVDYREYGRRLIMNIRKN 600
>gi|301765316|ref|XP_002918075.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Ailuropoda melanoleuca]
Length = 603
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 217/639 (33%), Positives = 344/639 (53%), Gaps = 58/639 (9%)
Query: 16 GDVNSKPLVQVMDIK--LIGSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQVKKGSV 72
GD + KP++QV++I+ + G++ RYR L+SD ++T + MLATQLN V+ Q+ +
Sbjct: 4 GDTSIKPILQVINIRPIITGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEEQLSSNCI 63
Query: 73 VQLIDYICSTVQNRKIIVVLNMETIILDCEP----IGNPKIFSESELTAQKTIPSNNLPQ 128
Q+ +I +T+++ + +V+L I+ E IGNP ++E Q+ +PS
Sbjct: 64 CQINRFIVNTLKDGRRVVILMELDILKSAEAVGLKIGNPVPYNEGH-GQQQVVPS----- 117
Query: 129 PVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQ 188
PV SAP + S S ++ S TF S+ S T
Sbjct: 118 PVSA--ASAPANKPQQQNGSSAMGSTTSKTYGA--SKTFGKAGGTSLANSAGGT------ 167
Query: 189 PPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSF 248
+++PIA+L PYQ +W I ARVT K +R ++N+RG+GK+FS
Sbjct: 168 ----------------QVKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSI 211
Query: 249 DLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEAT 308
+L+D + GEIR T FN VD+F+ +I++ +VY ISKG LK A K F +KN++E+
Sbjct: 212 ELVD-ESGEIRATAFNEQVDKFFPLIDMNKVYYISKGILKIANKQFTAVKNDYEMTFNNE 270
Query: 309 STVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGMETQ 367
++V C E+ +P QF F I ++E+ +S++D+IGI S + I ++ N E
Sbjct: 271 TSVMPC-EDGHHLPTVQFDFTGIGDLENKPKDSLIDIIGICKSYEDATKITVKSNNREVS 329
Query: 368 RRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTI 427
+R + L D SG+ V TLWG+ ++ Q PV+++K +V+DF G+S+ +
Sbjct: 330 KRNIYLMDMSGKVVTATLWGEDADRFDGSRQ--------PVMAIKGARVSDFGGRSLSVL 381
Query: 428 PSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQIKNEGLG 486
S+ + +NPD EA++LR WFDS G+ VSIS + G G N KT+ ++K+E LG
Sbjct: 382 SSSTVIVNPDIPEAYKLRGWFDSEGQALDGVSISDLKSGGTGGSNTNWKTLYEVKSENLG 441
Query: 487 RSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDEC 545
+K D+ + A + +++ ++ Y ACP + CNKKV Q ++C++C+ E
Sbjct: 442 HGDKADYFSSVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCDSEFPNF 497
Query: 546 DYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFN 605
YR +L I D WVT FQES E I+G L LK +++ F EI ++ F
Sbjct: 498 KYRMILSVNIADFQENQWVTCFQESAEAIIGQSTSYLGELKD--KNEQAFEEIFQNANFR 555
Query: 606 QYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
+ FR+++K E Y DE R+K TV+ V+Y R L+
Sbjct: 556 SFTFRIRVKLETYNDESRIKATVMDVKPVDYREYGRRLI 594
>gi|355717104|gb|AES05824.1| replication protein A1, 70kDa [Mustela putorius furo]
Length = 615
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 216/644 (33%), Positives = 348/644 (54%), Gaps = 58/644 (9%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD + KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ ++
Sbjct: 12 AIMQQGDTSIKPILQVINIRPIITGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEERL 71
Query: 68 KKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEP----IGNPKIFSESELTAQKTIPS 123
+ Q+ +I +T+++ + +V+L I+ E IGNP ++E Q+ +
Sbjct: 72 SSNCICQINRFIVNTLKDGRRVVILMELDILKSAEAVGLKIGNPVPYNEGH--GQQQV-- 127
Query: 124 NNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTV 183
+P PV N A Q +G+ + S + S TF S+ S T
Sbjct: 128 --VPPPVSAANPPASKPP----QQNGSSAMGSTASKTYGASKTFGKAGGTSLGNSSGGT- 180
Query: 184 QPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDG 243
+++PIA+L PYQ +W I ARVT K +R ++N+RG+G
Sbjct: 181 ---------------------QVKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEG 219
Query: 244 KVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI 303
K+FS +L+D + GEIR T FN VD+F+ +I++ +VY ISKG LK A K F +KN++E+
Sbjct: 220 KLFSIELVD-ESGEIRATAFNEQVDKFFPLIDMNKVYYISKGILKIANKQFTAVKNDYEM 278
Query: 304 FLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKN 362
++V C E+ +P QF F I ++E+ +S++D+IGI S + I ++ N
Sbjct: 279 TFNNETSVTPC-EDGHHLPTVQFDFTGIGDLENKPKDSLIDIIGICKSYEDATKITVKSN 337
Query: 363 GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK 422
E +R + L D SG+ V TLWG+ ++ Q PV+++K +V+DF G+
Sbjct: 338 NREVSKRNIYLMDMSGKVVTATLWGEDADRFDGSRQ--------PVMAIKGARVSDFGGR 389
Query: 423 SIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQIK 481
S+ + S+ + +NPD EA++LR WFDS G+ +SIS + G G N KT+ + K
Sbjct: 390 SLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQALDGISISDVKSGGTGGINTNWKTLYEAK 449
Query: 482 NEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQ 540
+E LG +K D+ + A I +++ ++ Y ACP + CNKKV Q ++C++C+
Sbjct: 450 SENLGHGDKADYFSSVATIVYLRKENCIYQACPT----QDCNKKVIDQQNGLYRCEKCDS 505
Query: 541 EIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIR 600
E YR +L I D WVT FQES E I+G L LK +++ F E+ +
Sbjct: 506 EFPSFKYRMILSVNIADFQENQWVTCFQESAEAIIGQSTAHLGELKE--KNEQAFEEVFQ 563
Query: 601 SRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
+ F ++FR+++K E Y DE R+K TVI V+Y R L+
Sbjct: 564 NANFRSFIFRIRVKLETYNDESRIKATVIDVKPVDYKEYGRRLI 607
>gi|57525314|ref|NP_001006221.1| replication protein A 70 kDa DNA-binding subunit [Gallus gallus]
gi|75571284|sp|Q5ZJJ2.1|RFA1_CHICK RecName: Full=Replication protein A 70 kDa DNA-binding subunit;
Short=RP-A p70; AltName: Full=Replication factor A
protein 1; Short=RF-A protein 1
gi|53133544|emb|CAG32101.1| hypothetical protein RCJMB04_17l6 [Gallus gallus]
Length = 614
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 223/661 (33%), Positives = 360/661 (54%), Gaps = 62/661 (9%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQ 57
M V L+ +I+ I G+ KP++QV++ + I G+ RYR L+SD V+T + MLATQ
Sbjct: 1 MSVRLSEGAIAAIMQGENVYKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQ 60
Query: 58 LNDRVKTGQVKKGSVVQLIDYICSTVQN-RKIIVVLNME---TIILDCEPIGNPKIFSES 113
LN V+ ++ + Q+ +I +++++ R+++++++++ T + +GNP ++E
Sbjct: 61 LNPLVEEERLSAHCICQVNRFIVNSLKDGRRVVILMDLDVLKTADMVGGTVGNPVPYNEG 120
Query: 114 ELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
+ + + P+ N +APN Q G+ S S AP
Sbjct: 121 QGQQRSSAPTAN----------AAPNKP-----------QQQDGNLSVAGSA---APKYH 156
Query: 174 SIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDL 233
+ F P P ++++PIA+LNPYQ +W I ARVT KG +
Sbjct: 157 APSNQFSKASAPSSVKTPG----------GTQSKVVPIASLNPYQSKWTICARVTQKGQI 206
Query: 234 RRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKN 293
R ++N+RG+GK+FS +L+D + GEIR T FN D+F+ +IE+ +VY +KG+LK A K
Sbjct: 207 RTWSNSRGEGKLFSIELVD-ESGEIRATAFNDQADKFFPLIELNKVYYFTKGNLKTANKQ 265
Query: 294 FNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVN 353
+ +KN++EI ++V C ++ +P QF F IS++E+ +SIVDVIGI S
Sbjct: 266 YTAVKNDYEITFNNETSVVPC-DDAQHLPSVQFDFVSISDLENTPKDSIVDVIGICKSYE 324
Query: 354 PSVPILRK-NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVK 412
I+ K + E +R ++L DTSG+ V TLWG+ E +K D PV+++K
Sbjct: 325 DVTKIVVKASNREVSKRNVHLMDTSGKLVTATLWGN----EAEKF----DGSRQPVIAIK 376
Query: 413 SGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAK-- 470
+V+DF G+S+ + S+ + +NPD EA +LR WFDS G+ SIS ++ G A
Sbjct: 377 GARVSDFGGRSLSVLSSSTVVVNPDSPEAFKLRGWFDSEGQLLECASIS-DVRGGSASGV 435
Query: 471 NEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QS 529
N KT+ + K+E LG+ +K D+ + I ++ ++ Y ACP + CNKKV Q
Sbjct: 436 NTNWKTLYEAKSERLGQGDKADYFSCVGTIVHLRKENCMYQACP----SQDCNKKVIDQQ 491
Query: 530 GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYEL 589
++C++C++E YR +L I D WVT FQES E ILG A L LK
Sbjct: 492 NGLYRCEKCDREFPNFKYRMMLLVTIADSLDYQWVTCFQESAEFILGQSATFLGELKD-- 549
Query: 590 QDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+++ F E+ ++ FN Y F++++K E Y DE R+K T + VNY S+ L+ I +
Sbjct: 550 KNEQAFEEVFQNANFNTYEFKIRVKLETYNDESRIKATALDVKPVNYREYSKRLIASIRR 609
Query: 650 S 650
+
Sbjct: 610 N 610
>gi|406694919|gb|EKC98235.1| hypothetical protein A1Q2_07466 [Trichosporon asahii var. asahii
CBS 8904]
Length = 591
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 214/641 (33%), Positives = 333/641 (51%), Gaps = 92/641 (14%)
Query: 21 KPLVQVMDIKLIGS------TQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQ 74
+P++QV+ +K I S +RYR ++SD +MLATQLN V+ +++K +V++
Sbjct: 24 EPVLQVLSVKRINSPASGAQATDRYRVILSDGEYFIQSMLATQLNHLVENDELEKNTVIK 83
Query: 75 LIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNN 134
L ++ +TVQNRK+I++L +E + + +GNP V V+
Sbjct: 84 LTSFVINTVQNRKLIIILALERQNWNGQKVGNP----------------------VNVDQ 121
Query: 135 YSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNA-----GSIVRSFQPTVQPPYQP 189
+A G ++P AP A G+ R +P P
Sbjct: 122 RAA-------------------GGVASP------APEAAPVTNGAASRGGASNARPAAAP 156
Query: 190 PPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFD 249
R+ GPI PI L+PYQ +W IKARVT K D++ ++N RG+GK+FS
Sbjct: 157 RGPSRDMGPIF---------PIEGLSPYQNKWTIKARVTQKSDIKHWSNQRGEGKLFSVT 207
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
L+D + GEIR T FN VD FY+++E G+V+ ISK + A+K F+++ NE+EI E
Sbjct: 208 LMD-ETGEIRATGFNDQVDAFYQLLEEGKVFFISKARINIAKKQFSNVNNEYEITFENQ- 265
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMET-QR 368
TE + S+P+ +++F ++++ES + ++ DVIG+V V+ I K + +
Sbjct: 266 -----TEIEPSVPEIKYNFTKLNDLESLQKDATTDVIGVVQEVHDLGQITSKATQKPFNK 320
Query: 369 RILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIP 428
R + L D SG+SV LTLWG K E PV++ K KV+DF G+S+
Sbjct: 321 RDIQLVDQSGQSVRLTLWG--------KTAENFTHYDHPVVAFKGVKVSDFGGRSLSMFS 372
Query: 429 STQLFINPDFAEAHELREWFDSGGK--NAATVSISREIAAGGAKNEIHKTVSQIKNEGLG 486
S + INP+ EA LR W+DS G+ N + S + A +EI KT+ Q K+E LG
Sbjct: 373 SATMAINPNTDEACALRGWYDSVGEKTNFKQYTNSGAMNAVSRPDEI-KTIGQAKDEQLG 431
Query: 487 RSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECD 546
++K D+ +V A I +IK ++F Y ACP CNKK+ G W+C++CN+
Sbjct: 432 MTDKTDYFSVCATILYIKQETFSYPACP----GEGCNKKLIDEGAEWRCEKCNRTYPGPV 487
Query: 547 YRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQ 606
+RY+LQ + D TG W+T F E GE+I+G A EL+ LK E D + +
Sbjct: 488 HRYILQMNVIDHTGSFWITGFNEVGEQIMGVSANELFKLKQE--SDPEAEKYFTRAAGRE 545
Query: 607 YLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
+ F++ K++ + D RV+ +NY+ S+ L+ I
Sbjct: 546 WDFKIMAKQDFFNDTARVRYQARSCAPINYAQSSQALVGKI 586
>gi|410980231|ref|XP_003996481.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Felis
catus]
Length = 701
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 213/639 (33%), Positives = 350/639 (54%), Gaps = 57/639 (8%)
Query: 16 GDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQVKKGSV 72
GD + KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ Q+ +
Sbjct: 4 GDTSIKPVLQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNHLVEGEQLSSNCI 63
Query: 73 VQLIDYICSTVQNRKIIVVLNMETIILDCEP----IGNPKIFSESELTAQKTIPSNNLPQ 128
Q+ +I +T+++ + +++L I+ E IGNP ++E Q+ +PS
Sbjct: 64 CQINRFIVNTLKDGRRVIILMELDILKSAEAVGLKIGNPVPYNEGH-GQQQVVPS----- 117
Query: 129 PVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQ 188
P N A Q +G+ + S + S TF A ++
Sbjct: 118 PASAANPPASKP----QQQNGSSGMGSTASKTYGASKTFGKAGATNLA------------ 161
Query: 189 PPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSF 248
N + G +K ++PIA+L PYQ +W I ARVT K +R ++N+RG+GK+FS
Sbjct: 162 ---NIGSGGTQVK------VVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSL 212
Query: 249 DLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEAT 308
+L+D + GEIR T FN VD+F+ +I++ +VY ISKG+LK A K F +KN++E+
Sbjct: 213 ELVD-ESGEIRATAFNEQVDKFFPLIDMNKVYYISKGTLKIANKQFTAVKNDYEMTFNNE 271
Query: 309 STVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGMETQ 367
++V C E+ +P QF F I ++E+ +S++D+IGI S + I ++ N E
Sbjct: 272 TSVVPC-EDGHHLPTVQFDFTAIGDLENKSKDSLIDIIGICKSYEDATKITVKSNNREVS 330
Query: 368 RRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTI 427
+R + L D SG+ V TLWG+ ++ D PV+++K +V+DF G+S+ +
Sbjct: 331 KRDIYLMDMSGKVVTATLWGEDADR--------FDGSRQPVMAIKGARVSDFGGRSLSVL 382
Query: 428 PSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQIKNEGLG 486
S+ + +NPD EA++LR WFDS G+ VSIS + G G N KT+ ++K+E LG
Sbjct: 383 SSSTVIMNPDIPEAYKLRGWFDSEGQALDGVSISDLKSGGTGGSNTNWKTLYEVKSENLG 442
Query: 487 RSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDEC 545
+K D+ + A + F++ ++ Y ACP + C KKV Q ++C++C+ E
Sbjct: 443 HGDKADYFSCVATVVFLRKENCMYQACPA----QDCFKKVIDQQNGLYRCEKCDSEFPSF 498
Query: 546 DYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFN 605
YR +L A I D WVT FQES E I+G Y+ + + +++ F E+ ++ F
Sbjct: 499 KYRMILSANIADFQENQWVTCFQESAEAIIG--QTTAYIGELKEKNEQAFEEVFQNANFR 556
Query: 606 QYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
++F++++K E Y DE R+K TV+ V+Y + L+
Sbjct: 557 TFIFKIRVKLETYNDESRIKATVMDVKPVDYREYGKRLI 595
>gi|403275301|ref|XP_003929392.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit
[Saimiri boliviensis boliviensis]
Length = 560
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 209/605 (34%), Positives = 325/605 (53%), Gaps = 55/605 (9%)
Query: 53 MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSE 112
MLATQLN V+ GQ+ V ++ +I +T+++ + +V+L ++ E +G
Sbjct: 1 MLATQLNTLVEEGQLASNCVCRINRFIVNTLKDGRRVVILMELDVLKSAEAVG------- 53
Query: 113 SELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNA 172
+++ N N G Q + + S P P
Sbjct: 54 -----------------IKIGNPVPYNEGHGQQQVAPPPVPAASPASSKPQ------PQN 90
Query: 173 GSIVRSFQPTVQPPYQPPPNF-RNHGPILKNEA---PARIIPIAALNPYQGRWAIKARVT 228
GS TV Y F + GP L + + A+++PIA+L PYQ +W I ARVT
Sbjct: 91 GS--SGVGSTVPKAYGASKTFGKAGGPSLSSTSGGTQAKVVPIASLTPYQSKWTICARVT 148
Query: 229 AKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLK 288
K +R ++N+RG+GK+FS +L+D + GEIR T FN VD+F+ +IEV +VY SKG+LK
Sbjct: 149 NKSQIRTWSNSRGEGKLFSLELVD-ESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLK 207
Query: 289 PAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGI 348
A K F +KN++E+ ++V C E+D +P QF F I ++E+ +S+VD+IGI
Sbjct: 208 IANKQFTAVKNDYEMTFNNETSVMPC-EDDHHLPTVQFDFTGIDDLENKSKDSLVDIIGI 266
Query: 349 VISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFP 407
S ++ I +R N E +R + L DTSG+ V TLWG+ +K Q P
Sbjct: 267 CKSYEDAIKITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDADKFDGSRQ--------P 318
Query: 408 VLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG 467
VL++K +V+DF G+S+ + S+ + +NPD EA++LR WFDS G+ VSIS + G
Sbjct: 319 VLAIKGARVSDFGGRSLSVLSSSTIILNPDIPEAYKLRGWFDSEGQALDGVSISDLKSGG 378
Query: 468 -GAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKV 526
G N KT+ ++K+E LG+ +KPD+ + A + +++ ++ Y ACP + CNKKV
Sbjct: 379 LGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQACPT----QDCNKKV 434
Query: 527 T-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYML 585
Q ++C++C+ E YR +L I D WVT FQES E ILG A L L
Sbjct: 435 IDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGEL 494
Query: 586 KYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLD 645
K +++ F E+ ++ F ++FR+++K E Y DE R+K TV+ V+Y R L+
Sbjct: 495 KD--KNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVQ 552
Query: 646 LISKS 650
I ++
Sbjct: 553 SIRRN 557
>gi|328770102|gb|EGF80144.1| hypothetical protein BATDEDRAFT_88559 [Batrachochytrium
dendrobatidis JAM81]
Length = 643
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 201/649 (30%), Positives = 346/649 (53%), Gaps = 48/649 (7%)
Query: 16 GDVNSKPLVQVMDIKLIGSTQ-----ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKG 70
G + +VQV++IK + + Q ERYR +ISD V+ +M+A+QLN+ V +G + K
Sbjct: 23 GTAYPEAIVQVLNIKKVPNGQGQPGMERYRLMISDGVNYIQSMIASQLNELVSSGSITKF 82
Query: 71 SVVQLIDYICSTVQNRKIIVVLNMETIIL---DCEPIGNPKIFSESELT---AQKTIPSN 124
+++L YIC+TV +++I+++L +E + + +GNP + +T A P+
Sbjct: 83 GIIKLQKYICNTVSSKRILIILALENLTPFNDTIQRVGNPVSLDGNTVTDPNAATHAPAV 142
Query: 125 NLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSF-STPNSGTFRAPNAGSIVRSFQPTV 183
+ A + +F+ Q Q P + S N R+ +GS +
Sbjct: 143 GSASTFGQQHAPALPTSSFSRQQG-----QQPMALPSNYNQQAGRSALSGSGSSNM---- 193
Query: 184 QPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDG 243
PY + N+G + I LNPYQ +W IK + KG +R +N A +G
Sbjct: 194 --PYGGGASTVNNG-----DTAGPYFAIKTLNPYQNKWTIKGVIINKGSVRTWNKAGREG 246
Query: 244 KVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI 303
++F+F + D D G+IR T FN VD FYE I+ G+ Y+ISK +K + FN +++E+
Sbjct: 247 RLFNFTISD-DSGDIRCTGFNEAVDMFYESIQEGQAYVISKAMIKVSNPAFNKGGHDYEM 305
Query: 304 FLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNG 363
++ +++ +C + SIP+ +++ + + E ++++D++ +V P I K
Sbjct: 306 TIDPHTSITVCNDPK-SIPQIKYNALTLDRLLEVEKDAVIDILAVVKECFPVSEITTKAN 364
Query: 364 METQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS 423
+ ++R LN+ D SG V LTLWG E + PV+ +K+ +V DF G++
Sbjct: 365 NKLKKRDLNIVDESGWLVRLTLWGSQA--------ETFEHSDNPVIGIKNARVGDFGGRT 416
Query: 424 IGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIH---KTVSQI 480
+ S+ L +NP +A LR WFD+ + + S+ + + N H KT+ QI
Sbjct: 417 LSVAMSSTLTLNPTMQDAFRLRGWFDAKASSIDFHTYSKSSSGVTSGNSTHSNLKTIQQI 476
Query: 481 KNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQC-NKKVTQSGNRWQCDRCN 539
++ LG EKPD+V++RAFI+F K ++ Y ACP + C NKKV + G+ W+C++C+
Sbjct: 477 QDANLGNGEKPDYVSLRAFISFAKRENLWYPACP----NEACRNKKVVEIGSEWRCEKCD 532
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEII 599
YRY+ + D TG TW+ AF E+ E++LG A E+ L +D+ F II
Sbjct: 533 SNYPHPVYRYITSFSVSDYTGQTWLQAFNETVEKVLGKTANEMQKLVDTDKDE--FDRII 590
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLIS 648
++ +Y+F ++ K E+Y D ++ ++T++ A +V+Y++ SR +L IS
Sbjct: 591 EQAIYQEYVFDVRAKAEMYQDAKKTRLTIVEAKEVDYAAASREMLATIS 639
>gi|2258469|gb|AAB71836.1| replication protein A1 [Oryza sativa Indica Group]
gi|125542895|gb|EAY89034.1| hypothetical protein OsI_10518 [Oryza sativa Indica Group]
Length = 630
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 210/640 (32%), Positives = 345/640 (53%), Gaps = 61/640 (9%)
Query: 23 LVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICST 82
++QV+D+K IG+ R+ FL SD ML TQL V++G ++ V++++DY C+T
Sbjct: 35 VLQVVDLKPIGT---RFTFLASDGKDKIKTMLLTQLAPEVRSGNIQNLGVIRVLDYTCNT 91
Query: 83 V--QNRKIIVVLNMETII--LDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAP 138
+ + K++++ +E + LD E I E+E +K P+ L S P
Sbjct: 92 IGEKQEKVLIITKLEVVFKALDSE------IKCEAEKQEEK--PAILLSPKEESVVLSKP 143
Query: 139 NSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGP 198
+ + +A IV + P + R H
Sbjct: 144 TNAPPLPPVVLKPKQE--------------VKSASQIVNEQRGNAAPAARLAMTRRVH-- 187
Query: 199 ILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEI 258
P+ +LNPYQG W IK RVT+KG+LR Y NARG+G VF+ +L D DG +I
Sbjct: 188 -----------PLISLNPYQGNWIIKVRVTSKGNLRTYKNARGEGCVFNVELTDVDGTQI 236
Query: 259 RVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEED 318
+ T FN +FY + E+G+VY ISKGSL+ A K F + N++E+ L + V+ E +
Sbjct: 237 QATMFNEAAKKFYPMFELGKVYYISKGSLRVANKQFKTVHNDYEMTLNENAVVEEA-EGE 295
Query: 319 DSIPKQQFSFRHISEI-ESAENNSIVDVIGIVISVNPSVPILRKNGMET-QRRILNLKDT 376
IP+ Q++F I ++ +VDVIG+V SV+P++ + RK ET +R + + D
Sbjct: 296 TFIPQIQYNFVKIDQLGPYVGGRELVDVIGVVQSVSPTLSVRRKIDNETIPKRDIVVADD 355
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP 436
S ++V ++LW D GQ+L +MVD P++++KS KV+DF G S+ T+ + + +NP
Sbjct: 356 SSKTVTISLWNDLATTTGQELLDMVDSA--PIIAIKSLKVSDFQGLSLSTVGRSTIVVNP 413
Query: 437 DFAEAHELREWFDSGGKNAATVSISREIAA---GGAKNEIHKTV--SQIKNEGLGRSEKP 491
D EA +LR W+DS GK + SI ++ A GGA++ V S I ++ +KP
Sbjct: 414 DLPEAEQLRAWYDSEGKGTSMASIGSDMGASRVGGARSMYSDRVFLSHITSDPNLGQDKP 473
Query: 492 DWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKKVTQS-GNRWQCDRCNQEIDECDYRY 549
+ ++ A+I+ IK D + Y AC + CNKKVT++ G+ + C+ C + EC RY
Sbjct: 474 VFFSLNAYISLIKPDQTMWYRAC------KTCNKKVTEAMGSGYWCEGCQKNDAECSLRY 527
Query: 550 LLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLF 609
++ ++ D TG W++ F + E I+GC A EL ++ E DD + ++ + +LF
Sbjct: 528 IMVIKVSDPTGEAWLSLFNDQAERIVGCSADELDRIRKEEGDDSYLLK-LKEATWVPHLF 586
Query: 610 RLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
R+ + + Y +E+R +ITV V++++E++Y+L+ I+K
Sbjct: 587 RVSVTQNEYMNEKRQRITVRSEAPVDHAAEAKYMLEEIAK 626
>gi|115451537|ref|NP_001049369.1| Os03g0214100 [Oryza sativa Japonica Group]
gi|108706832|gb|ABF94627.1| replication factor-a protein 1 containing protein, expressed [Oryza
sativa Japonica Group]
gi|113547840|dbj|BAF11283.1| Os03g0214100 [Oryza sativa Japonica Group]
gi|125585388|gb|EAZ26052.1| hypothetical protein OsJ_09906 [Oryza sativa Japonica Group]
Length = 630
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 210/640 (32%), Positives = 345/640 (53%), Gaps = 61/640 (9%)
Query: 23 LVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICST 82
++QV+D+K IG+ R+ FL SD ML TQL V++G ++ V++++DY C+T
Sbjct: 35 VLQVVDLKPIGT---RFTFLASDGKDKIKTMLLTQLAPEVRSGNIQNLGVIRVLDYTCNT 91
Query: 83 V--QNRKIIVVLNMETII--LDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAP 138
+ + K++++ +E + LD E I E+E +K P+ L S P
Sbjct: 92 IGEKQEKVLIITKLEVVFKALDSE------IKCEAEKQEEK--PAILLSPKEESVVLSKP 143
Query: 139 NSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGP 198
+ + +A IV + P + R H
Sbjct: 144 TNAPPLPPVVLKPKQE--------------VKSASQIVNEQRGNAAPAARLAMTRRVH-- 187
Query: 199 ILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEI 258
P+ +LNPYQG W IK RVT+KG+LR Y NARG+G VF+ +L D DG +I
Sbjct: 188 -----------PLISLNPYQGNWIIKVRVTSKGNLRTYKNARGEGCVFNVELTDVDGTQI 236
Query: 259 RVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEED 318
+ T FN +FY + E+G+VY ISKGSL+ A K F + N++E+ L + V+ E +
Sbjct: 237 QATMFNEAAKKFYPMFELGKVYYISKGSLRVANKQFKTVHNDYEMTLNENAVVEEA-EGE 295
Query: 319 DSIPKQQFSFRHISEI-ESAENNSIVDVIGIVISVNPSVPILRKNGMET-QRRILNLKDT 376
IP+ Q++F I ++ +VDVIG+V SV+P++ + RK ET +R + + D
Sbjct: 296 TFIPQIQYNFVKIDQLGPYVGGRELVDVIGVVQSVSPTLSVRRKIDNETIPKRDIVVADD 355
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP 436
S ++V ++LW D GQ+L +MVD P++++KS KV+DF G S+ T+ + + +NP
Sbjct: 356 SSKTVTISLWNDLATTTGQELLDMVDSA--PIIAIKSLKVSDFQGLSLSTVGRSTIVVNP 413
Query: 437 DFAEAHELREWFDSGGKNAATVSISREIAA---GGAKNEIHKTV--SQIKNEGLGRSEKP 491
D EA +LR W+DS GK + SI ++ A GGA++ V S I ++ +KP
Sbjct: 414 DLPEAEQLRAWYDSEGKGTSMASIGSDMGASRVGGARSMYSDRVFLSHITSDPNLGQDKP 473
Query: 492 DWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKKVTQS-GNRWQCDRCNQEIDECDYRY 549
+ ++ A+I+ IK D + Y AC + CNKKVT++ G+ + C+ C + EC RY
Sbjct: 474 VFFSLNAYISLIKPDQTMWYRAC------KTCNKKVTEAIGSGYWCEGCQKNDAECSLRY 527
Query: 550 LLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLF 609
++ ++ D TG W++ F + E I+GC A EL ++ E DD + ++ + +LF
Sbjct: 528 IMVIKVSDPTGEAWLSLFNDQAERIVGCSADELDRIRKEEGDDSYLLK-LKEATWVPHLF 586
Query: 610 RLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
R+ + + Y +E+R +ITV V++++E++Y+L+ I+K
Sbjct: 587 RVSVTQNEYMNEKRQRITVRSEAPVDHAAEAKYMLEEIAK 626
>gi|31580977|dbj|BAC77529.1| replication protein A 70b [Oryza sativa Japonica Group]
Length = 630
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 210/640 (32%), Positives = 345/640 (53%), Gaps = 61/640 (9%)
Query: 23 LVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICST 82
++QV+D+K IG+ R+ FL SD ML TQL V++G ++ V++++DY C+T
Sbjct: 35 VLQVVDLKPIGT---RFTFLASDGKDKIKTMLLTQLAPEVRSGNIQNLGVIRVLDYTCNT 91
Query: 83 V--QNRKIIVVLNMETII--LDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAP 138
+ + K++++ +E + LD E I E+E +K P+ L S P
Sbjct: 92 IGEKQEKVLIITKLEVVFKALDSE------IKCEAEKQEEK--PAILLSPKEESVVLSKP 143
Query: 139 NSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGP 198
+ + +A IV + P + R H
Sbjct: 144 TNAPPLPPVVLKPKQE--------------VKSASQIVNEQRGNAAPAARLAMTRRVH-- 187
Query: 199 ILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEI 258
P+ +LNPYQG W IK RVT+KG+LR Y NARG+G VF+ +L D DG +I
Sbjct: 188 -----------PLISLNPYQGNWIIKVRVTSKGNLRTYKNARGEGCVFNVELTDVDGTQI 236
Query: 259 RVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEED 318
+ T FN +FY + E+G+VY ISKGSL+ A K F + N++E+ L + V+ E +
Sbjct: 237 QATMFNEAAKKFYPMFELGKVYYISKGSLRVADKQFKTVHNDYEMTLNENAVVEEA-EGE 295
Query: 319 DSIPKQQFSFRHISEI-ESAENNSIVDVIGIVISVNPSVPILRKNGMET-QRRILNLKDT 376
IP+ Q++F I ++ +VDVIG+V SV+P++ + RK ET +R + + D
Sbjct: 296 TFIPQIQYNFVKIDQLGPYVGGRELVDVIGVVQSVSPTLSVRRKIDNETIPKRDIVVADD 355
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP 436
S ++V ++LW D GQ+L +MVD P++++KS KV+DF G S+ T+ + + +NP
Sbjct: 356 SSKTVTISLWNDLATTTGQELLDMVDSA--PIIAIKSLKVSDFQGLSLSTVGRSTIVLNP 413
Query: 437 DFAEAHELREWFDSGGKNAATVSISREIAA---GGAKNEIHKTV--SQIKNEGLGRSEKP 491
D EA +LR W+DS GK + SI ++ A GGA++ V S I ++ +KP
Sbjct: 414 DLPEAEQLRAWYDSEGKGTSMASIGSDMGASRVGGARSMYSDRVFLSHITSDPNLGQDKP 473
Query: 492 DWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKKVTQS-GNRWQCDRCNQEIDECDYRY 549
+ ++ A+I+ IK D + Y AC + CNKKVT++ G+ + C+ C + EC RY
Sbjct: 474 VFFSLNAYISLIKPDQTMWYRAC------KTCNKKVTEAIGSGYWCEGCQKNDAECSLRY 527
Query: 550 LLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLF 609
++ ++ D TG W++ F + E I+GC A EL ++ E DD + ++ + +LF
Sbjct: 528 IMVIKVSDPTGEAWLSLFNDQAERIVGCSADELDRIRKEEGDDSYLLK-LKEATWVPHLF 586
Query: 610 RLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
R+ + + Y +E+R +ITV V++++E++Y+L+ I+K
Sbjct: 587 RVSVTQNEYMNEKRQRITVRSEAPVDHAAEAKYMLEEIAK 626
>gi|417411795|gb|JAA52323.1| Putative replication factor-a protein 1, partial [Desmodus
rotundus]
Length = 588
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 210/624 (33%), Positives = 337/624 (54%), Gaps = 64/624 (10%)
Query: 33 GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVV 91
G++ RYR L+SD ++T + MLATQLN V+ Q+ + Q+ +I +T+++ + +V+
Sbjct: 8 GNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEDEQLSSNCICQINRFIVNTLKDGRRVVI 67
Query: 92 LNMETIILDCEP----IGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQN 147
L ++ E IGNP ++E + Q V +A + Q
Sbjct: 68 LMELDVLKSAEAVGVKIGNPVPYNEG----------HGQQQVVPSPASAASPPASKPPQQ 117
Query: 148 SGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNF-RNHGPILKNEA-- 204
S + SG +V PY F + G L N +
Sbjct: 118 SAS-------------SGMV-------------SSVAKPYGASKTFGKAGGTSLVNSSGG 151
Query: 205 -PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCF 263
A+++PIA+L PYQ +W I ARVT K +R ++N+RG+GK+FS +L+D + GEIR T F
Sbjct: 152 SQAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVD-ESGEIRATAF 210
Query: 264 NAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPK 323
N D+F+ +I+V +VY SKG+LK A K F +KN++E+ ++V C E+ ++P
Sbjct: 211 NEQADKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPC-EDGRNLPT 269
Query: 324 QQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVE 382
QF F I ++ES +S+VDVIGI S + I ++ N E +R + L DTSG+ V
Sbjct: 270 VQFGFTKIDDLESKPKDSLVDVIGICKSYEDATKITVKANNREVSKRNIYLMDTSGKVVS 329
Query: 383 LTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAH 442
TLWG+ +K Q PV+++K +V+DF G+S+ I S+ + +NPD EA+
Sbjct: 330 ATLWGEDADKFDGSRQ--------PVMAIKGARVSDFGGRSLSVISSSTVIVNPDIPEAY 381
Query: 443 ELREWFDSGGKNAATVSISREIAAGGAKNEIH-KTVSQIKNEGLGRSEKPDWVTVRAFIT 501
+LR WFDS G+ VSIS + G A + + KT+ ++K+E LG+ +K D+ + A +
Sbjct: 382 KLRGWFDSEGQALDGVSISDLKSGGTAGSATNWKTLYEVKSENLGQGDKADYFSCVATVV 441
Query: 502 FIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTG 560
+++ ++ Y ACP + CNKKV Q ++C++C++E YR +L I D
Sbjct: 442 YLRKENSMYQACPT----QDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNIADYQD 497
Query: 561 LTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGD 620
WVT FQES E ILG Y+ + + +++ F EI ++ F ++F++++K E Y D
Sbjct: 498 NQWVTCFQESAEAILG--QSTAYLGELKEKNEQAFEEIFQNANFRSFVFKIRVKLETYND 555
Query: 621 EQRVKITVIRADQVNYSSESRYLL 644
E R+K TV+ V+Y SR ++
Sbjct: 556 ESRIKATVMDVKPVDYREYSRRMI 579
>gi|346471207|gb|AEO35448.1| hypothetical protein [Amblyomma maculatum]
Length = 604
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 222/661 (33%), Positives = 352/661 (53%), Gaps = 74/661 (11%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLIGS-TQERYRFLISDSVSTQ-HAMLATQL 58
M LT ++ I KP++QV++ K I S T +RYR L+SD V +AML TQL
Sbjct: 1 MENRLTAGAVERILNNQQVDKPVLQVLNFKPITSNTADRYRLLLSDGVQCHTYAMLGTQL 60
Query: 59 NDRVKTGQVKKGSVVQLIDYICSTVQ-NRKIIVVLNMETII----LDCEPIGNPKIFSES 113
N + ++ K +VVQL Y+C+ V ++K+++VL++ I + C +GNP
Sbjct: 61 NGMITNNEIDKFAVVQLDKYMCNVVSPDKKVLIVLDLTVIAKGSAVGCR-LGNP------ 113
Query: 114 ELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
IP++ AP++G+ ++ + T QN G
Sbjct: 114 ------VIPNST---------GGAPSAGSADVGANKTQFQQNGGHD-------------- 144
Query: 174 SIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDL 233
Q + P Y R P N+ ++PIA+L PYQ RW I+ARVT K +
Sbjct: 145 ------QSSSMPSYG-----RAAYPASTNDVV--VVPIASLTPYQNRWTIRARVTNKSGI 191
Query: 234 RRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLK--PAQ 291
R ++N++G+GK+FS DLLD + GEIR T FNA DR Y+I+EV +VY IS+ +K A
Sbjct: 192 RTWSNSKGEGKLFSMDLLD-ESGEIRATAFNAECDRLYDIVEVNKVYYISRAVIKNIRAG 250
Query: 292 KNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVIS 351
+F+ +KN++E+ +T+ C + +IP QF+F IS ++ +S++DVIGI +
Sbjct: 251 YSFSSIKNDFEMSFIPETTITPCDDVVPNIPTLQFNFVPISRLQEVSKDSVIDVIGICKT 310
Query: 352 VNPSVPILRKN-GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLS 410
+ R+N E ++R ++L D SG V LT+WGD E D PV++
Sbjct: 311 AGDVTTVTRRNTNQELKKRDVSLVDRSGTEVSLTMWGD--------QAEKFDGSDNPVVA 362
Query: 411 VKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAK 470
VK +V+DFSG S+ I S+ L +NPD E+H L W+ G T S+S
Sbjct: 363 VKGARVSDFSGVSLSLISSSMLQVNPDIPESHALLGWYTKEGALLQTRSLSTRAGGAMGG 422
Query: 471 NEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSG 530
N KT++Q K E LG+ +KPD+ +V+A ++ I+ ++ Y ACP CNKKV
Sbjct: 423 NANWKTLAQAKAENLGQGDKPDYYSVKACVSIIRKENCLYKACP----SENCNKKVVDLE 478
Query: 531 N-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL-YMLKYE 588
N ++C++C +E + +R L+ A + D + WVT F + E+++G A++L M
Sbjct: 479 NGYYRCEKCARETMDFKWRLLVSANLTDFSDGQWVTCFGKEAEQLIGASAEDLGEMYSKS 538
Query: 589 LQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLIS 648
++D R+ +I+ F ++FRL+ K E++ DE R+K +V+ VNY ++ LL I+
Sbjct: 539 SKEDSRYEDILNEVPFKPFIFRLRTKMEVFNDESRLKTSVMSVAPVNYVEYTQKLLKDIA 598
Query: 649 K 649
+
Sbjct: 599 E 599
>gi|336367309|gb|EGN95654.1| hypothetical protein SERLA73DRAFT_186799 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380027|gb|EGO21181.1| hypothetical protein SERLADRAFT_476039 [Serpula lacrymans var.
lacrymans S7.9]
Length = 601
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 203/635 (31%), Positives = 327/635 (51%), Gaps = 79/635 (12%)
Query: 24 VQVMDIKLIGST-------QERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLI 76
VQ++ IK + T +R+R +ISD V AMLATQLN V ++ K +V +
Sbjct: 29 VQLLSIKKVTPTATASNPAMDRFRIIISDGVHFVQAMLATQLNRLVYDNEIGKNTVAIID 88
Query: 77 DYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYS 136
C+ VQ++++I++L++ + + + IGNP I NLP +V+
Sbjct: 89 KLTCNFVQDKRLIIILDLRVVSTNEDKIGNP-------------ISPVNLPASEQVSASP 135
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNH 196
P + T N SI P +P P+ +N
Sbjct: 136 VPEASTSN----------------------------ASI---------PQTKPQPSRQNQ 158
Query: 197 GPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGG 256
K I PI L+PYQ W IKARVT K ++R ++N RG+GK+F+ L+D + G
Sbjct: 159 AA--KGGRQNSIYPIEGLSPYQNNWTIKARVTQKSEIRTWSNQRGEGKLFNVTLMD-ESG 215
Query: 257 EIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE 316
EIR T FNAVVD YE +E G+VYLISK + A+K F++++N++E+ LE + V+ C E
Sbjct: 216 EIRATGFNAVVDELYEKLEEGKVYLISKARVNLAKKKFSNVQNDYELSLEKHTEVEECLE 275
Query: 317 EDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDT 376
+P +++F +SE+E+ +S DV IV V P I+ K +R L + D
Sbjct: 276 T-SGLPMIKYNFISLSELEAQPKDSTCDVAAIVKEVGPLGEIVSKTNRTIPKRELTIVDK 334
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP 436
SG SV LTLWG K E + PV++ K KV DF G+S+ I ++ + I+P
Sbjct: 335 SGFSVRLTLWG--------KQAEQYNSEGHPVIAFKGVKVGDFGGRSLSMISTSMMSIDP 386
Query: 437 DFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKT----VSQIKNEGLGRSEKPD 492
D E+H LR W+DS G A S S ++ G +++ +S +K LG S+K D
Sbjct: 387 DIDESHLLRGWYDSIGVEQAFQSHSNANSSMGMSTVFNRSEMRHLSDVKESQLGMSDKTD 446
Query: 493 WVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQ 552
+ + R+ I IK ++ Y ACP + CNKKVT G+ W+C++C + + ++RY++
Sbjct: 447 FFSCRSTIMHIKGENISYPACPT----QGCNKKVTDIGDGWRCEKCEKTFERPEHRYIIS 502
Query: 553 AQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLK 612
+ D + W+ F ++G + G A +L +K +D+ + ++ + F +
Sbjct: 503 LAVADWSTQAWLQGFNDAGVAVFGKSADDLMEIKE--RDEAEYNTVMAKASGATFNFTCR 560
Query: 613 IKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
K++ Y D+ RV+ +++ + V+Y E++YL DL+
Sbjct: 561 AKQDTYNDQTRVRYGIVKLNPVDYREEAKYLRDLL 595
>gi|301115057|ref|XP_002999298.1| replication protein A 70 kDa DNA-binding subunit, putative
[Phytophthora infestans T30-4]
gi|262111392|gb|EEY69444.1| replication protein A 70 kDa DNA-binding subunit, putative
[Phytophthora infestans T30-4]
Length = 629
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 216/664 (32%), Positives = 346/664 (52%), Gaps = 55/664 (8%)
Query: 3 VNLTPNSISLINGGDVNS--KPLVQVMDIKLI----GSTQERYRFLISDSVSTQHAMLAT 56
VNLTPN++S++ V +P +Q++D K I G+ +RYR ++SD S MLAT
Sbjct: 2 VNLTPNAVSMLYHNQVPDGFEPWLQIIDTKKIKPASGTGGDRYRIVLSDGTSYLSGMLAT 61
Query: 57 QLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELT 116
QL ++ +K V+QL DY+ + VQ R+II+VL + I+ + IG+P+ S
Sbjct: 62 QLAPMMENESLKTNYVLQLKDYLGNEVQGRRIIIVLKVGNIVPHFDCIGSPQNIDGSRGP 121
Query: 117 AQKTIPSNNLP-QPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSI 175
+ S ++P +AP ++ + T Q P + P+S T
Sbjct: 122 SVPAASSASVPPAAALGARSAAPAQPSYQQPRAPTNQFQQPPA--APSSYT--------- 170
Query: 176 VRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQG-RWAIKARVTAKGDLR 234
PP +P + N GP+++ + R+ I +LNPY G RW IKARVT + ++
Sbjct: 171 ---------PPTKPAASTYNRGPVVRQDPNIRLSDIQSLNPYAGGRWTIKARVTTRSPIK 221
Query: 235 RYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNF 294
+ N+RG GK+FS DLLD+ GEIR T FN VD+FYE++ G ++ + G +K + F
Sbjct: 222 NWTNSRGSGKLFSVDLLDAKKGEIRATFFNDGVDKFYEMLRPGGIFYFAGGKVKMTNRRF 281
Query: 295 NHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNP 354
+ + N++E+ + S + ED I + Q++F+ I+EIE+ +S VD+IGIV V P
Sbjct: 282 SSVDNDYEVTFDPHSDISPA-PEDGQISQMQYAFKKIAEIENVPADSNVDIIGIVRDVTP 340
Query: 355 SVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSG 414
K G + +R ++L D S ++ T+W + +E VL++K
Sbjct: 341 VNEFTSKAGKQLFKRDISLVDDSNVEIKCTMWNEQAQQECSNWLNQ-------VLAIKGC 393
Query: 415 KVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEI- 473
+V++F+G+S+ T S+ +NP EA L WF +GG T S+S G +
Sbjct: 394 RVSEFNGRSLSTAGSSSFTVNPTIPEAGHLVTWFSNGGNATQTKSLSSGGGGFGGGSLGS 453
Query: 474 ---HKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDS-FCYTACPLMIGDRQCNKKVTQS 529
++ IK++ LG +KPD++TV+ + FIK D+ Y ACP +C KKV
Sbjct: 454 FSERAVINDIKSKQLGFGQKPDYITVKGTVNFIKHDTGIYYQACP------KCQKKVVAD 507
Query: 530 -GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGC-PAKELYMLKY 587
+ C++C C+ RY+L + D TG TW T F + G+ ++G A E+
Sbjct: 508 VAQNYTCEKCQTSYPNCENRYILSVIMLDHTGSTWTTCFNDQGKVVMGGRTADEI----G 563
Query: 588 ELQDD--VRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLD 645
EL+D F I + +F QY+ RL++K E +E RVK +V+ + VN+ ES+ LL
Sbjct: 564 ELRDTNPALFESIFKEALFKQYVCRLRVKAENVQEELRVKASVVNLEPVNFVQESKDLLQ 623
Query: 646 LISK 649
I++
Sbjct: 624 AIAQ 627
>gi|326931344|ref|XP_003211792.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Meleagris gallopavo]
Length = 601
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 219/646 (33%), Positives = 352/646 (54%), Gaps = 62/646 (9%)
Query: 16 GDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQVKKGSV 72
G+ KP++QV++ + I G+ RYR L+SD V+T + MLATQLN V+ ++ +
Sbjct: 3 GENVCKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQLNPLVEEERLSAHCI 62
Query: 73 VQLIDYICSTVQN-RKIIVVLNME---TIILDCEPIGNPKIFSESELTAQKTIPSNNLPQ 128
Q+ +I +++++ R+++++++++ T + +GNP ++E + + + P+ N
Sbjct: 63 CQVNRFIVNSLKDGRRVVILMDLDVLKTADMVGGTVGNPVPYNEGQGQQRSSAPTAN--- 119
Query: 129 PVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQ 188
+APN Q G+ S S AP + F P
Sbjct: 120 -------TAPNKP-----------QQQNGNLSVAGSA---APKYHAPSNQFSKASAPSSV 158
Query: 189 PPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSF 248
P ++++PIA+LNPYQ +W I ARVT KG +R ++N+RG+GK+FS
Sbjct: 159 KTPG----------GTQSKVVPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSI 208
Query: 249 DLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEAT 308
+L+D + GEIR T FN D+F+ +IE+ +VY +KG+LK A K + +KN++EI
Sbjct: 209 ELVD-ESGEIRATAFNDQADKFFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFTNE 267
Query: 309 STVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK-NGMETQ 367
++V C ++ +P QF F IS++E+ +SIVDVIGI S I+ K N E
Sbjct: 268 TSVVPC-DDAQHLPSVQFDFVSISDLENTPKDSIVDVIGICKSYEDVTKIVVKANNREVS 326
Query: 368 RRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTI 427
+R ++L DTSG+ V TLWG+ E +K D PV+++K +V+DF G+S+ +
Sbjct: 327 KRNVHLMDTSGKLVTATLWGN----EAEKF----DGSRQPVIAIKGARVSDFGGRSLSVM 378
Query: 428 PSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAK--NEIHKTVSQIKNEGL 485
S+ + +NPD EA +LR WFDS G+ SIS ++ G A N KT+ + K+E L
Sbjct: 379 SSSTVVVNPDSPEAFKLRGWFDSEGQLLECASIS-DVRGGSASGVNTNWKTLYEAKSERL 437
Query: 486 GRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDE 544
G+ +K D+ + I ++ ++ Y ACP + CNKKV Q ++C++C++E
Sbjct: 438 GQGDKADYFSCVGTIVHLRKENCMYQACP----SQDCNKKVIDQQNGLYRCEKCDREFPN 493
Query: 545 CDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVF 604
YR +L I D WVT FQES E ILG A L LK +++ F E+ ++ F
Sbjct: 494 FKYRMMLLVTIADSLDYQWVTCFQESAEFILGQSATFLGELKE--KNEQAFEEVFQNANF 551
Query: 605 NQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
N Y F++++K E Y DE R+K T + VNY S+ L+ I ++
Sbjct: 552 NTYEFKIRVKLETYNDESRIKATALDVKPVNYREYSKRLIASIRRN 597
>gi|358053972|dbj|GAA99937.1| hypothetical protein E5Q_06640 [Mixia osmundae IAM 14324]
Length = 605
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 212/649 (32%), Positives = 329/649 (50%), Gaps = 79/649 (12%)
Query: 12 LINGGDVNSKPLVQVMDIKLI-------GST-QERYRFLISDSVSTQHAMLATQLNDRVK 63
L + +S P++Q++ +K + G T +RYR ++SDS AMLATQLN +
Sbjct: 16 LHGDAEASSSPVLQILSVKKVSPAPMPNGQTGADRYRLILSDSAHFIQAMLATQLNHLIG 75
Query: 64 TGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESE-LTAQKTIP 122
GQ++K +VV+L Y + VQNR I++ L +E + + + IG+P + E + +Q
Sbjct: 76 DGQIEKHAVVRLDQYAINKVQNRSIVICLGIEVLGKETDKIGDPSSVEKLEKIESQAPKG 135
Query: 123 SNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPT 182
N + V+ SAP +N+ N N TP
Sbjct: 136 VNPFNEISNVSRASAPAKSAIASKNARATNGPN-----TP-------------------- 170
Query: 183 VQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGD 242
I PI L+PYQ +W IKARVT K D+R Y NA+GD
Sbjct: 171 -------------------------IYPIEGLSPYQNKWTIKARVTLKSDIRHYTNAKGD 205
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQ-KNFNHLKNEW 301
GKVFS +LLD + GEIR T FN VD + + E G+VY +SK + ++ K +N NE+
Sbjct: 206 GKVFSVNLLD-ESGEIRATGFNDAVDNLFNVFEEGKVYYVSKARVNISKNKQYNPTNNEY 264
Query: 302 EIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK 361
EI E + V+LCT+ D +P+ +++F ++S++ + E N+++DV+G+V V I+ K
Sbjct: 265 EIMFERDTQVELCTDTTD-LPQVKYNFVNLSDLTTQEANAMIDVLGVVKEVGELSSIVSK 323
Query: 362 -NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFS 420
+ +R + L D S SV +TLWG + E P+++ K KV DF
Sbjct: 324 ATSKQIPKREIVLIDQSEFSVRMTLWG--------RQAEQFSAPDQPIIAFKGVKVGDFG 375
Query: 421 GKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSI-SREIAAGGAKNEIHKTVSQ 479
G+S+ + S+ + ++PD AH L W + G+ + S AGG K E KT++Q
Sbjct: 376 GRSLSMVSSSTMAVDPDIQPAHSLSGWMKAVGETKTFQTFKSTGGGAGGFKEEEAKTIAQ 435
Query: 480 IKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRC 538
IK EGLG + PD +RA I ++K DS Y ACP CNKKVT S ++C++C
Sbjct: 436 IKEEGLGMQDTPDNFFLRATIVYVKKDSLSYPACP----KEGCNKKVTPTSEGSFRCEKC 491
Query: 539 NQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEI 598
+++ +RY++ + D TG W++AF ++G IL A ++ L+ E D+ F
Sbjct: 492 SEDFPAPQHRYVMSLSVLDHTGQLWLSAFDDAGRLILDHSADDIERLRDE--DEQAFVGA 549
Query: 599 IRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
I Y F + + E + D RV+ + RA V+Y + S +L+ I
Sbjct: 550 IWRGSGKAYNFACRARTETFQDTSRVRYQINRATPVDYVAASAWLVKQI 598
>gi|410915298|ref|XP_003971124.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Takifugu rubripes]
Length = 570
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/439 (39%), Positives = 262/439 (59%), Gaps = 19/439 (4%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
+IPIA LNPYQ +W I+ARV K +R +NN+RG+GK+FSF+++D + GE+++T FN V
Sbjct: 141 MIPIAQLNPYQSKWTIRARVMNKSSIRTWNNSRGEGKLFSFEIVD-ESGEMKITAFNKEV 199
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D+F+ ++E G+VY ISK +LK A K +N LK+++E+ L A S++ C + D IP Q
Sbjct: 200 DKFFSLVEQGKVYYISKATLKVANKQYNTLKHDYEMTLHAHSSIMPCADGQD-IPAVQCD 258
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
F I+E+E+ + ++I+DVIG+ + I K+ E +R L+L DT+G+ V TLWG
Sbjct: 259 FVPIAELENRDKDAIIDVIGVCKTAEDVSRITTKSSREVSKRTLHLIDTTGKMVAATLWG 318
Query: 388 DFCNK-EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELRE 446
+ K EG + PV+++K +++DF G+S+ + S+ + +NPD EA LR
Sbjct: 319 EEAEKFEGSEQ---------PVVAIKGARLSDFGGRSLSALFSSTVMVNPDIPEAFRLRA 369
Query: 447 WFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSD 506
W+D GG A+ S+S + G KT+S +KNE LG EK D+ + A + + + D
Sbjct: 370 WYDQGGYALASQSLSETKSGGSGMRMNWKTLSDVKNENLGHGEKADYFSCVATLLYSRKD 429
Query: 507 SFCYTACPLMIGDRQCNKKVTQSGNRW-QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVT 565
+ Y ACP + CNKKV N W +C++CN+E YR LL A + D WVT
Sbjct: 430 TCLYRACPSV----DCNKKVLDQHNGWFRCEKCNREFPNFKYRLLLSANLADFGDNQWVT 485
Query: 566 AFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVK 625
FQE+ E +LG A+ L L+ D+ F + + F ++F+ ++K E Y DE RVK
Sbjct: 486 CFQETAEALLGHSAETLGQLRD--TDEAAFDAVFQKANFTTHIFKNRVKLETYNDESRVK 543
Query: 626 ITVIRADQVNYSSESRYLL 644
+TV+ VN+ SR LL
Sbjct: 544 VTVMEVQPVNHREYSRMLL 562
>gi|449265984|gb|EMC77111.1| Replication protein A 70 kDa DNA-binding subunit, partial [Columba
livia]
Length = 607
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 224/654 (34%), Positives = 351/654 (53%), Gaps = 67/654 (10%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ G DV SKP++QV++ + I G+ RYR L+SD V+T + MLATQLN V+ ++
Sbjct: 3 AIMQGEDV-SKPVLQVINTRAIATGNGPPRYRMLMSDGVNTLSSFMLATQLNSLVEEERL 61
Query: 68 KKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEP-----IGNPKIFSESELTAQKTIP 122
+ Q+ + +++++ + +V+L M+ +L IGNP ++E + + + P
Sbjct: 62 AAHCICQVNKFYVNSLKDGRRVVIL-MDLNVLKTADKVGGNIGNPVPYNEGQGQQRSSAP 120
Query: 123 SNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPT 182
+ N P G QN S + P + + AP+ F
Sbjct: 121 AAN------------PAPGKPQQQNGNV-------SVAGPAAPKYHAPS-----NQFGKA 156
Query: 183 VQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGD 242
P P + +++PIA+LNPYQ +W I ARVT KG +R ++N+RG+
Sbjct: 157 SAPNLLKTPG----------GSQVKVVPIASLNPYQSKWTICARVTQKGQIRTWSNSRGE 206
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE 302
GK+FS +L+D + GEIR T FN D+F+ +IE+ +VY SKG+LK A K + +KN++E
Sbjct: 207 GKLFSIELVD-ESGEIRATAFNDQADKFFPLIELNKVYYFSKGTLKSANKQYTAIKNDYE 265
Query: 303 IFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK- 361
I + ++V C ++ +P QF F IS++E+ +SIVDVIGI S I+ K
Sbjct: 266 ITFTSETSVVPC-DDAQHLPSVQFDFVSISDLENTPKDSIVDVIGICKSYEDVTKIIVKA 324
Query: 362 NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG 421
N E +R ++L DTSG+ V TLWG+ E D PV+++K +V+DF G
Sbjct: 325 NNREVSKRNVHLMDTSGKLVTATLWGNEA--------EQFDGSRQPVIAIKGARVSDFGG 376
Query: 422 KSIGTIPSTQLFINPDFAEAHELREW--FDSGGKNAATVSIS--REIAAGGAKNEIHKTV 477
+S+ + S+ + INPD EA +LR W FDS G+ SIS R A GA N KT+
Sbjct: 377 RSLSVLSSSTVIINPDSPEAFKLRGWYEFDSEGQLLECTSISDVRGGLAAGA-NTNWKTL 435
Query: 478 SQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCD 536
+ K E LG+ +K D+ + + ++ ++ Y ACP + CNKKV Q ++C+
Sbjct: 436 FEAKAENLGQGDKADYFSCVGTVVHLRKENCMYQACP----SQDCNKKVIDQQNGLYRCE 491
Query: 537 RCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFG 596
+C++E YR +L I D WVT FQ++ E ILG A L LK +++ F
Sbjct: 492 KCDREFPNFKYRMMLLVTIADCLEYQWVTCFQDTAEFILGQKAAFLGELKE--KNEQAFE 549
Query: 597 EIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
E+ ++ FN Y FR+++K E Y DE R+K T + VNY S+ L+ I ++
Sbjct: 550 EVFQNANFNTYEFRIRVKLETYNDESRIKATAVDVKPVNYREYSKRLIASIRRN 603
>gi|297806837|ref|XP_002871302.1| hypothetical protein ARALYDRAFT_325405 [Arabidopsis lyrata subsp.
lyrata]
gi|297317139|gb|EFH47561.1| hypothetical protein ARALYDRAFT_325405 [Arabidopsis lyrata subsp.
lyrata]
Length = 604
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 208/647 (32%), Positives = 342/647 (52%), Gaps = 76/647 (11%)
Query: 13 INGGDVNSKPLVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSV 72
++ V + +VQV+D+K +G+ RY F +D AML L + +G+++ +
Sbjct: 19 LDSSSVRPEIVVQVVDLKPVGN---RYTFNANDGNMKMKAMLPATLTCEIISGKIQNLGL 75
Query: 73 VQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRV 132
V+L+DY + + + + +I CE + + +SE+ A+ + +P +
Sbjct: 76 VRLLDYTVNDIPGKSEEKYM----LITKCEAVASAL---DSEIKAEIKASTGITLKPKQ- 127
Query: 133 NNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPN 192
F A +A I+ +
Sbjct: 128 ---------------------------------EFVAKSASQIINEQRG----------- 143
Query: 193 FRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLD 252
N P + R+ P+ +LNPYQG W I+ RVT KG +R YNNARG+G VF+ +L D
Sbjct: 144 --NAAPAARMAMTRRVHPLVSLNPYQGSWTIRVRVTNKGVMRTYNNARGEGCVFNVELTD 201
Query: 253 SDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVD 312
+G +I+ T FNA +FY+ E+G+VY IS+GSLK A K F ++N++E+ L S V+
Sbjct: 202 EEGTQIQATMFNAAARKFYDRFEMGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVE 261
Query: 313 LCTEEDDSIPKQQFSFRHISEIESAEN-NSIVDVIGIVISVNPSVPILRKNGMET-QRRI 370
+ E+ P+ +F+F I E+ + N ++DVIG+V V+P++ I RKN E +R
Sbjct: 262 EASNEEMFTPEIKFNFVPIDELGTYVNQKDLIDVIGVVQCVSPTMSIRRKNDNEMIPKRD 321
Query: 371 LNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPST 430
+ L D S +V ++LW D GQ+L +M D PV+++KS KV DF G S+ TI +
Sbjct: 322 ITLADESKNTVVVSLWNDLATGIGQELLDMAD--NHPVIAIKSLKVGDFQGVSLSTISRS 379
Query: 431 QLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG---GAKNEIHKTV--SQI-KNEG 484
+ INPD EA +L+ W+D+ GK + +I +++ G+++ V S I N
Sbjct: 380 NVVINPDSPEAKKLKSWYDAEGKETSMSAIGSGMSSSANNGSRSMYSDRVFLSHITSNPS 439
Query: 485 LGRSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKKVTQSGNR-WQCDRCNQEI 542
LG EKP + ++RA+I+FIK D + Y AC + CNKKVT++ + + C+ C ++
Sbjct: 440 LGE-EKPVFFSIRAYISFIKPDQTMWYRAC------KTCNKKVTEAMDSGYWCEGCQKKD 492
Query: 543 DECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSR 602
EC RY++ ++ D TG TW +AF + E+I+GC A EL LK E + F ++
Sbjct: 493 QECSLRYIMAVKVSDSTGETWFSAFNDEAEKIIGCTADELNNLKSEEGEVNEFQTKLKET 552
Query: 603 VFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
++ +LFR+ + ++ Y E+R +ITV +++++E+R LL ISK
Sbjct: 553 TWSSHLFRISVSQQEYNSEKRQRITVRGVSPIDFAAETRLLLQDISK 599
>gi|164657638|ref|XP_001729945.1| hypothetical protein MGL_2931 [Malassezia globosa CBS 7966]
gi|159103839|gb|EDP42731.1| hypothetical protein MGL_2931 [Malassezia globosa CBS 7966]
Length = 567
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 200/616 (32%), Positives = 326/616 (52%), Gaps = 76/616 (12%)
Query: 53 MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEP--IGNPKIF 110
MLATQL V+ G + + VV++ + +TVQNRKI+++LN+E +I P IGNP+
Sbjct: 1 MLATQLKPLVENGSLDRNVVVRVTQFTSNTVQNRKILILLNLE-VISPALPHRIGNPQNI 59
Query: 111 SESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAP 170
++ +A ++ + +P +TP++
Sbjct: 60 ESAKSSADASVETKAVPG-------------------------------ATPHAD----- 83
Query: 171 NAGSIVRSFQPTVQPPYQPPPNFRNHGP--------ILKNEAPARIIPIAALNPYQGRWA 222
V+ P + P +HG + K+ + + PI AL+PYQ +W
Sbjct: 84 -----VKPPAPAMAPSLGAQALSGSHGDSARVGSRGVAKSSSGMPVYPIDALSPYQNKWT 138
Query: 223 IKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLI 282
IKARVT K D+R ++NARGDGK+FS +LLD + GEIR T FN VDRFY +++ +VY I
Sbjct: 139 IKARVTLKTDIRHWSNARGDGKLFSVNLLD-ESGEIRATAFNDAVDRFYPVLQENKVYFI 197
Query: 283 SKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSI 342
SK + A+K F+ L NE+EI LE+ S ++ C E D +P+ +++F I ++ + E N
Sbjct: 198 SKAKVTIAKKQFSTLPNEYEISLESGSEIEECAEAGD-VPEVKYNFVSIDQLTTVEPNQT 256
Query: 343 VDVIGIVISVNPSVPILRKNGME-TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMV 401
DVI I+ IL K ++R L L D+SG SV +TLWG + + ++ +
Sbjct: 257 TDVITILDGYTDVSEILSKATQRPIKKRDLTLIDSSGMSVRMTLWG----SQAENFEKTI 312
Query: 402 DVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNA------ 455
PV++ K KV+DF G+S+ S+ + INPD E+H LR W+D+ G +A
Sbjct: 313 AGEEKPVIAFKGVKVSDFGGRSLSMFSSSTMSINPDIPESHGLRGWYDNEGNSAHIRSYG 372
Query: 456 ATV--SISREIAAGGAKNEIHKTVSQIKNEGLGRS-EKPDWVTVRAFITFIKSDSFCYTA 512
AT+ + + + G + +T++Q+K+E LG S E+ D+ RA + +I+ ++ YTA
Sbjct: 373 ATLDGTTASALNQGALRANEFRTLAQVKDESLGTSFERADYFNARAVVLYIRPNTLYYTA 432
Query: 513 CPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGE 572
CP + CNKKV + + W+C++C++ RY+ A I D +G W++ F E G
Sbjct: 433 CP----GQDCNKKVIEESDGWRCEKCDRSYPAPVRRYIFSANIADYSGQIWISGFNEVGV 488
Query: 573 EILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYL-FRLKIKEELYGDEQRVKITVIRA 631
+LG A EL ++ E + + + + +RV + + F + K+E + D RV+ TV +
Sbjct: 489 ALLGMTADELDSIRNENEGEFK---AVLTRVIGRVMDFHCRAKQETFNDTNRVRYTVTQI 545
Query: 632 DQVNYSSESRYLLDLI 647
+N++ L+D I
Sbjct: 546 QPLNFAKAGHELVDKI 561
>gi|312371186|gb|EFR19433.1| hypothetical protein AND_22425 [Anopheles darlingi]
Length = 621
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 214/663 (32%), Positives = 352/663 (53%), Gaps = 76/663 (11%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLIGST---QERYRFLISDSVST-QHAMLATQLND 60
LT +S + G+ P++QV+ K I S+ ER+R LISD S +AMLATQLND
Sbjct: 6 LTEGFLSEMMKGNEMENPVLQVIGSKRIASSGEQSERFRLLISDGKSLYSYAMLATQLND 65
Query: 61 RVKTGQVKKGSVVQLIDYICSTVQ-----NRKIIVVLNMETI---ILDCEPIGNPKIFSE 112
+ G++ + +++++ Y S V +++++++ + + L E IGNP+ ++
Sbjct: 66 MHRQGKLAENTIIRIDRYTTSVVNRNEKGEKRVLIIVELTVLKDGALVGEKIGNPQPMTD 125
Query: 113 SELTAQKTIPSNNLPQPV--RVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAP 170
+P++ V ++Y P + + + SG ST S
Sbjct: 126 --------VPASQTQNSVGGSASSYEKPAASSRPSETSG---------LSTYGSNRSAGG 168
Query: 171 NAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAK 230
+ G++ G L + PI++L+PYQ +W IKARV +K
Sbjct: 169 SNGTVA--------------------GASLSDTLTH---PISSLSPYQNKWVIKARVMSK 205
Query: 231 GDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPA 290
+R ++NA+G+GK+FS D++D + GEIRVT F DR+Y++IEV +VY ISK LKPA
Sbjct: 206 SGIRTWSNAKGEGKLFSMDVMD-ESGEIRVTAFKEQCDRYYDMIEVDKVYFISKCQLKPA 264
Query: 291 QKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVI 350
K +++LKN++E+ + + V C ++D S+P+ Q++F I++I + E N+ VDVIG+
Sbjct: 265 NKQYSNLKNDYEMTMTNDTIVQECKDKDGSMPEIQYNFVPIAQIANLEPNATVDVIGVCK 324
Query: 351 SVNPSVPILRK-NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVL 409
+ V K +G E ++R L D+S +V+LTLWGD + Q + PV+
Sbjct: 325 EASEVVQFTAKTSGRELRKREATLVDSSNAAVQLTLWGD----DAQNFPASSN----PVV 376
Query: 410 SVKSGKVNDF-SGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGG 468
V+ +V++F GK++G I + + +NPD AH +R WF++GG++A+ S+S AG
Sbjct: 377 LVRGARVSEFGGGKTLGLIGGSVMKLNPDMEAAHRVRGWFENGGRDASLASVSARTGAGA 436
Query: 469 AK--NEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKV 526
N T + + LG +KPD+ V+A I IKS + Y ACP CNKKV
Sbjct: 437 GAGLNTEWLTFREASDRSLGAGDKPDYFQVKAMIHTIKSQNAVYKACP----QADCNKKV 492
Query: 527 T-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL-YM 584
Q +++C++CN E YR L+ I D T WVT F E EE+ G ++E+ M
Sbjct: 493 IDQDNGQYRCEKCNAEFPNFKYRLLVNMLIGDWTSNRWVTMFTELAEEVFGKSSQEIGSM 552
Query: 585 LKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
L+++ ++ + + S F ++F+L+ K E Y ++ R K T + A VN+ + L+
Sbjct: 553 LEFQTEEAEK---LFTSMCFKSFIFKLRTKVEFYNEQARNKTTAVSAAPVNHKEYNALLI 609
Query: 645 DLI 647
I
Sbjct: 610 KSI 612
>gi|47221831|emb|CAG08885.1| unnamed protein product [Tetraodon nigroviridis]
Length = 631
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 206/604 (34%), Positives = 320/604 (52%), Gaps = 48/604 (7%)
Query: 53 MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCEP----IGNP 107
+LATQLN + + V L +T+ + R++IVVL+ME I+ E IGNP
Sbjct: 67 LLATQLNSLPEKNLLVPHCVCVLKRTTSNTLSDGRRVIVVLDME-ILQSAEESGGLIGNP 125
Query: 108 KIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTF 167
F + + PS P + +S + +P +FS +
Sbjct: 126 AAFKDGMAS-----PSTFSPAKASPSTFSPTKA--------------SPSTFSPAKA--- 163
Query: 168 RAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPA-RIIPIAALNPYQGRWAIKAR 226
+P+ S ++ T P P + P+ +I IA LNPY +W I+AR
Sbjct: 164 -SPSTFSPTKASPSTFSPAKASPSKVSPKKASSSSPGPSTNLISIAQLNPYLSKWTIRAR 222
Query: 227 VTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS 286
V K +R ++N+RG+GK+FSF ++D + GEI++T FN VD+F+ ++E G+VY ISK +
Sbjct: 223 VMNKASIRNWSNSRGEGKLFSFVVVD-ESGEIKITVFNNEVDKFFPLVEQGKVYYISKAT 281
Query: 287 LKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVI 346
LK A K +N L +++E+ L A S++ C + D IP Q F I+E+E+ + ++I+DVI
Sbjct: 282 LKVANKQYNTLNHDYEMTLHAHSSIVPCADGQD-IPAAQCDFVPIAELENRDKDAIIDVI 340
Query: 347 GIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFF 406
G+ +V I + E +R L+L DT+G+ V TLWG+ E +K D
Sbjct: 341 GVCKTVEDVSRITTRTSREVSKRTLHLIDTTGKMVAATLWGE----EAEKF----DGSEQ 392
Query: 407 PVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAA 466
PV+++K +++DF G+S+ T+ S+ + +NPD EA LR W+D GG + S+S +
Sbjct: 393 PVVAIKGARLSDFGGRSLSTLFSSTVMVNPDIPEAIRLRAWYDHGGYAQDSQSLSETKSR 452
Query: 467 GGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKV 526
G KT+S++KNE G K D+ + A + +I+ DS Y ACP CNKKV
Sbjct: 453 GSGARMNWKTLSEVKNENFGTRRK-DYFSCVATLLYIRKDSCLYRACP----SSDCNKKV 507
Query: 527 TQSGNRW-QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYML 585
N W +C++CNQ+ +YR LL A + D WVT FQE+ E +LG A+ L L
Sbjct: 508 IDQFNGWFRCEKCNQDFPNFEYRLLLSANLADFGDNQWVTCFQETAEVLLGHSAETLGRL 567
Query: 586 KYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLD 645
+ D+ F + + F Y+F++++K E Y DE RVK TV+ +++ SR LL
Sbjct: 568 RD--TDEAAFDAVFQKANFTSYIFKIRVKLETYNDESRVKATVMEVQPLDHREYSRRLLG 625
Query: 646 LISK 649
I K
Sbjct: 626 NIRK 629
>gi|431891029|gb|ELK01908.1| Replication protein A 70 kDa DNA-binding subunit [Pteropus alecto]
Length = 599
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 215/653 (32%), Positives = 348/653 (53%), Gaps = 73/653 (11%)
Query: 10 ISLINGGDVNSKPLVQVMDIKLIGSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQVK 68
+ L G N +P+ G++ RYR L+SD ++T + MLATQLN V+ Q+
Sbjct: 3 VHLSEGAIANIRPIT-------TGNSPPRYRLLMSDGLNTLSSFMLATQLNTLVEDEQLS 55
Query: 69 KGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEP----IGNPKIFSESELTAQKTIPSN 124
+ Q+ +I +T+++ + +++L +I+ E IGNP ++E Q+ +PS
Sbjct: 56 SNCICQINRFIVNTLKDGRRVIILMELSILKSAEAVGLKIGNPVPYNEGH-GQQQVVPS- 113
Query: 125 NLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQ 184
P S ++P + + N S V S TV
Sbjct: 114 -------------------------------PVSAASPPTSKPQQQNGSSGVGS---TVS 139
Query: 185 PPYQPPPNF-RNHGPILKNEA---PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAR 240
+ F R G L N + A+++PIA+L PYQ +W I ARVT K +R ++N+R
Sbjct: 140 KAFGASKTFGRAGGTSLVNSSGGTQAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSR 199
Query: 241 GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNE 300
G+GK+FS +L+D + GEIR T FN VD+F+ +I+V +VY SKG+LK A K F +KN+
Sbjct: 200 GEGKLFSIELVD-ESGEIRATAFNEQVDKFFPLIDVNKVYYFSKGTLKIANKQFTAVKND 258
Query: 301 WEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-L 359
+E+ ++V C E+ +P QF F I ++ES +S+VD+IGI S + I +
Sbjct: 259 YEMTFNNETSVIPC-EDGHHLPTVQFDFTGIGDLESKSKDSLVDIIGICKSYEDATKITV 317
Query: 360 RKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDF 419
+ N E +R + L D SG+ V TLWG+ +K Q PV+++K +V+DF
Sbjct: 318 KSNNREVSKRNIYLMDMSGKVVSATLWGEDADKFDGSRQ--------PVMAIKGARVSDF 369
Query: 420 SGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGG--AKNEIHKTV 477
G+S+ + S+ + +NPD EA++LR WFDS G+ VSIS ++ +GG N KT+
Sbjct: 370 GGRSLSILSSSTIIVNPDIPEAYKLRGWFDSEGQALDGVSIS-DLKSGGIAGSNTNWKTL 428
Query: 478 SQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCD 536
+ K+E LG+ +K D+ + A + +++ ++ Y ACP + CNKKV Q ++C+
Sbjct: 429 YEAKSENLGQGDKADYFSSVATVVYLRKENSMYQACPT----QDCNKKVIDQQNGLYRCE 484
Query: 537 RCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFG 596
+C++E YR +L I D WVT FQES E ILG Y+ + + +++ F
Sbjct: 485 KCDREFPNFKYRMILSVNIADFQENQWVTCFQESAEAILG--QSTAYVGELKEKNEQAFE 542
Query: 597 EIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
EI ++ F ++F++++K E + DE R+K V+ V++ R L+ I K
Sbjct: 543 EIFQNANFRSFIFKIRVKLETFNDESRIKAVVMDVKPVDFREYGRRLIMNIRK 595
>gi|358389545|gb|EHK27137.1| hypothetical protein TRIVIDRAFT_85768 [Trichoderma virens Gv29-8]
Length = 600
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 209/639 (32%), Positives = 335/639 (52%), Gaps = 82/639 (12%)
Query: 22 PLVQVMDIKLI---GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
P++Q + IK + G +RYR ++SD V+ MLATQ N + ++++GS+ ++ Y
Sbjct: 29 PVMQCLQIKQMAPSGQGGDRYRLVMSDGVNYVQTMLATQANHVIHDNKLERGSLTRVKQY 88
Query: 79 ICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYS 136
+ ++ + I+V+L++E I E IG+P + A+ TI N+
Sbjct: 89 TPNNLKGKNILVILDLEVIESFGAQEKIGDPVVLDPR--PAETTIAGND----------- 135
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNH 196
F T +P +Q Q P N
Sbjct: 136 --------------FYGSKKEEMDT------------------KPQMQ---QLPSN---- 156
Query: 197 GPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGG 256
PI A A I PI AL+P+ +W IKARVT K D++ ++ G+GK+FS +LLD + G
Sbjct: 157 -PISATHAGANIYPIEALSPFSSKWTIKARVTFKSDIKTWHKPTGEGKLFSVNLLD-ESG 214
Query: 257 EIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
EI+ T FN D FY++++ G VY IS + A+K F++L N++E+ E + ++
Sbjct: 215 EIKATGFNDQCDAFYDLLQEGSVYYISSPCRVSLAKKQFSNLPNDYELAFERETVIEK-A 273
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLK 374
E+ ++P+ +F+F I E++S E +S VDVIG++ V I +K+G Q+R L L
Sbjct: 274 EDQTNVPQLRFNFCTIQELQSVEKDSTVDVIGVLKEVAEVSEITSKKDGRPFQKRELTLV 333
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
D +G SV +T+WG K D V++ K KV+DF GKS+ + S + +
Sbjct: 334 DDTGYSVRVTIWG--------KTASAFDANPESVVAFKGTKVSDFGGKSLSLLSSGTMTV 385
Query: 435 NPDFAEAHELREWFDSGGKN---AATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKP 491
+PD +A+ L+ W+DS G+ A +++ A G K EI KT+SQ+K+E LG ++
Sbjct: 386 DPDIPDAYRLKGWYDSAGRTNTFATHQNLAGVAGATGRKEEI-KTISQVKDENLGVDDQA 444
Query: 492 DWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYL 550
+ T++A I F+K D+FCY AC ++ CNKKVT WQC++CN D+ DYRY+
Sbjct: 445 -YYTIKATIVFVKQDNFCYPAC----SNQGCNKKVTAMPDGTWQCEKCNVSHDKPDYRYI 499
Query: 551 LQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFR 610
+Q + D T W++ F ++G ++G A EL LK DD +F + + +FR
Sbjct: 500 MQLNVADHTSHQWLSCFDDTGRIVVGMSANELMELKE--NDDAKFMAAFEAVNCKKLVFR 557
Query: 611 LKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+ K + +GD QRV+ V A V+Y +E L++LI +
Sbjct: 558 CRAKMDNFGDTQRVRYQVFSATLVDYKTEGNKLVELIKQ 596
>gi|157133641|ref|XP_001662954.1| replication factor a 1, rfa1 [Aedes aegypti]
gi|108870757|gb|EAT34982.1| AAEL012826-PA [Aedes aegypti]
Length = 619
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 213/655 (32%), Positives = 340/655 (51%), Gaps = 69/655 (10%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLI---GSTQERYRFLISDSVST-QHAMLATQLND 60
LT I+ I G KP+VQ++ K I G ERYR LISD + AMLATQLN+
Sbjct: 7 LTTGCIADIMRGTELEKPVVQILGSKRIAGGGEQSERYRLLISDGQNLYSFAMLATQLNE 66
Query: 61 RVKTGQVKKGSVVQLIDYICSTVQ-----NRKIIVVLNMETIILDC---EPIGNPKIFSE 112
GQ+ + +V+++ YI S V ++++++L++ + E IGNP+ +E
Sbjct: 67 LHHNGQLAEFTVIRIDRYITSVVNRNEKGEKRVLIILDLHVVKPGAAVGEKIGNPQTLTE 126
Query: 113 SELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNA 172
+ + S + P R + + ++G+ QN P G + +
Sbjct: 127 TGAGSGGGAASTSAV-PARTESAGSVSNGSA-YQNR-------------PMGGGMSSAPS 171
Query: 173 GSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGD 232
G S + T+ P I +L+PYQ +W I+ARV +K
Sbjct: 172 GGDGLSLENTLTHP------------------------INSLSPYQNKWVIRARVMSKSG 207
Query: 233 LRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQK 292
+R ++NA+G+GK+FS D++D + GEIRVT F D++Y++IEV +VY I+K LKPA K
Sbjct: 208 IRTWSNAKGEGKLFSMDVMD-ESGEIRVTAFKDQCDKYYDMIEVDKVYYITKCQLKPANK 266
Query: 293 NFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV 352
++ LKN++E+ + + V C + S+P Q++F IS+I + E N+++DVIG+
Sbjct: 267 QYSTLKNDYEMTMTNDTIVQECKDAGSSMPSIQYNFVPISQIGNMEPNAMIDVIGVCKEA 326
Query: 353 NPSVPI-LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSV 411
+ R +G E ++R + L D+S +V LTLWGD + Q + PVL +
Sbjct: 327 GEVMQFTARSSGRELKKREVTLVDSSNAAVSLTLWGD----DAQNFNATNN----PVLVI 378
Query: 412 KSGKVNDF-SGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAK 470
K +V +F GKS+G + S+ L NPD EAH++R W+ GG + S+S AG
Sbjct: 379 KGARVTEFGGGKSLGLVASSVLKTNPDNEEAHKIRGWYLGGGCDNVVNSVSTRTGAGAGY 438
Query: 471 NEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QS 529
+ T + K + LG +KPD+ V+A I IKS + Y ACP +CNKKV Q
Sbjct: 439 STEWITFHEAKEKNLGAGDKPDYFQVKALIHNIKSANAVYKACP----QAECNKKVIDQD 494
Query: 530 GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYEL 589
+++C++CN + YR L+ + D T WVT F + E++LG ++++
Sbjct: 495 NGQYRCEKCNADFPNFKYRLLVNMLVGDWTSNRWVTVFTDLAEQMLGKSSQDIGDALEFN 554
Query: 590 QDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
+D+ +I + F Y+F+L+ K E YGD R K T + A+ VN+ + YL+
Sbjct: 555 KDEAE--QIFSAINFKSYVFKLRTKVEFYGDSSRNKTTAVAANPVNHKEYNAYLI 607
>gi|255547187|ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
gi|223546255|gb|EEF47757.1| replication factor A 1, rfa1, putative [Ricinus communis]
Length = 622
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 175/466 (37%), Positives = 282/466 (60%), Gaps = 20/466 (4%)
Query: 194 RNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDS 253
+N P + R+ P+ +LNPYQG W IK RVT+KG++R Y NARG+G VF+ +L D
Sbjct: 162 KNMAPTARMAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDE 221
Query: 254 DGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDL 313
DG +I+ T FN +FY+ ++G+VY ISKGSLK A K F ++N++E+ L S V+
Sbjct: 222 DGTQIQATMFNEAARKFYDKFQLGKVYYISKGSLKVANKQFRTVQNDYEMNLNENSQVEE 281
Query: 314 CTEEDDSIPKQQFSFRHISEI-ESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRIL 371
++E IP+ +F+F I ++ N +VDVIG+V SV+P++ I RK+ + +R +
Sbjct: 282 ASDEAAFIPETKFNFVPIDQLGPYVSTNELVDVIGVVQSVSPTMSIRRKSNNDIVPKRDI 341
Query: 372 NLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQ 431
+ D + ++V ++LW D GQ+L +M D PV+++K+ KV DF G S+ T+ +
Sbjct: 342 TIADETKKTVVVSLWNDLATDVGQELLDMADKS--PVVAIKALKVGDFQGVSLSTLGRSI 399
Query: 432 LFINPDFAEAHELREWFDSGGKNAATVSISREI-----AAGGAKNEIHKTVSQI-KNEGL 485
+ +NPD E+ +L+ WFDS GK + S+ + + GG+ ++S I N L
Sbjct: 400 IQVNPDTPESKKLKSWFDSEGKETSLASVGAGLSPSTKSGGGSMYSDRVSISHITSNPSL 459
Query: 486 GRSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKKVTQS-GNRWQCDRCNQEID 543
G S+KP + ++RA+I+FIK D S Y AC + CNKKVT++ G + C+ C +
Sbjct: 460 G-SDKPAFFSIRAYISFIKPDQSMWYRAC------KTCNKKVTEAIGGGYWCEGCQKNDA 512
Query: 544 ECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRV 603
EC RY++ ++ D +G WV+AF GE I+GC A EL LK + +D + ++
Sbjct: 513 ECSLRYIMVVKVSDASGEGWVSAFNNEGERIIGCSADELDKLKSQ-EDGNSYELKLKEAT 571
Query: 604 FNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
++ +LFR+ + + Y +E+R +ITV +++++ESR+LL+ ISK
Sbjct: 572 WSPHLFRVSVAQNEYNNEKRQRITVRAVAPLDFAAESRFLLEEISK 617
>gi|402222443|gb|EJU02510.1| hypothetical protein DACRYDRAFT_78925 [Dacryopinax sp. DJM-731 SS1]
Length = 602
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 217/669 (32%), Positives = 349/669 (52%), Gaps = 97/669 (14%)
Query: 1 MPVNLTPNSIS-LINGGDVNSKPLVQVMDIKLIGSTQE---RYRFLISDSVSTQHAMLAT 56
M NLTP++ S L+ + P++Q++ +K + + R R +ISD AMLAT
Sbjct: 1 MSFNLTPDACSQLMQDAPPDFSPVLQILSVKQVNTGPAGPPRMRVIISDGQHFTQAMLAT 60
Query: 57 QLN---DRVKT---GQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIF 110
QLN DR + ++ K SV++L + ++VQN+++I++L++ + + IGNP +
Sbjct: 61 QLNHLTDRPEEDTPAELDKNSVIKLEKFASNSVQNKRLIILLDLSILGNAGQKIGNPTSY 120
Query: 111 --SESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFR 168
+++E AQ P+ V P G GT ++ P
Sbjct: 121 DVAKAESHAQAISAPAPAAPPITVQKSHQPAPG-------GTRSASMP------------ 161
Query: 169 APNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVT 228
+N GPI PI L+PYQ +W IKARVT
Sbjct: 162 -------------------------KNGGPIF---------PIEGLSPYQNKWTIKARVT 187
Query: 229 AKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLK 288
K D+R ++N +G+GK+FSF L+D + EIR T FN VD FY++I+ G+VY SKG +
Sbjct: 188 NKSDIRHWSNQKGEGKLFSFTLMD-ETSEIRATAFNQQVDEFYDMIQEGKVYFFSKGRIG 246
Query: 289 PAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGI 348
PA++ FN++ N +EI E + V+ C + D +P+ ++ F + ++ ++ DVIG+
Sbjct: 247 PAKRQFNNVSNLYEITFERNTEVEPCLDAGD-VPEVKYQFVTLEGLQEVPKDATCDVIGV 305
Query: 349 VISVNPSVPILRK-NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFP 407
V V IL K G +R +++ D SG LTLWG K G+ Q P
Sbjct: 306 VTEVGELGEILAKATGRSVPKRDISIVDRSGFFCRLTLWG----KSGETFQAPDQ----P 357
Query: 408 VLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG 467
+++ K +V+DF+G+S+ S+Q+ INPD +AH+LR W+DS G N + S AG
Sbjct: 358 IIAFKGVRVSDFNGRSLSFQSSSQMSINPDIPDAHQLRGWYDSIGNNQPHHTFSSAAGAG 417
Query: 468 GA-------KNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDR 520
+NE+ KT++Q+K+EGLG EK D+ T +A + +K ++F Y AC
Sbjct: 418 AGGDRGQFNRNEL-KTIAQVKDEGLGMGEKNDFFTTKASVIHVKQENFVYPAC----RSE 472
Query: 521 QCNKKVTQ-SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPA 579
+CNKKV Q S RW+C C DE +YRYLL + D TG W++AF ++G+ + A
Sbjct: 473 KCNKKVVQTSDGRWECVSCGLTFDEPEYRYLLSISVADHTGQAWLSAFNDAGDMLFEMKA 532
Query: 580 KELYMLKYELQDDVRFGEI---IRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNY 636
EL LK D+ F ++ +RS+++N F + +++ Y D+ +V+ + R +++
Sbjct: 533 GELQNLKD--TDETHFSKVMSDVRSKMYN---FSCRARQDTYNDQTKVRYNITRMTKIDL 587
Query: 637 SSESRYLLD 645
+E + L+D
Sbjct: 588 KTEMKALVD 596
>gi|110756775|ref|XP_001121722.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
1 [Apis mellifera]
Length = 597
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 213/650 (32%), Positives = 340/650 (52%), Gaps = 87/650 (13%)
Query: 12 LINGGDVNSKPLVQVMDIKLIGSTQ--ERYRFLISDSVSTQH-AMLATQLNDRVKTGQVK 68
++NG DV+ KP++Q++ K + S+ ERYR L+SD MLATQLN + +
Sbjct: 12 IMNGIDVD-KPVLQILGHKKLSSSSSGERYRLLVSDGKRVNSFTMLATQLNSMITENILT 70
Query: 69 KGSVVQLIDYICSTVQN----RKIIVVLNMETIILDCE---PIGNPKIFSESELTAQKTI 121
+ S+ Q+ Y S V N ++++V+LN++ + E IGNP
Sbjct: 71 EFSICQINRYAISMVNNAGKQKRVMVILNIDLKVPGDEVGHKIGNPT------------- 117
Query: 122 PSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQP 181
N++ G S P + A +A S+V Q
Sbjct: 118 ------------------------------NAEADGD-SKPQAQI--AQSAQSVVPQQQT 144
Query: 182 TVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARG 241
++P NH + PI AL+PYQ RW IKARV +K ++R ++N+RG
Sbjct: 145 NLKP---------NHNMQQSSTNNISTTPIVALSPYQNRWVIKARVVSKSNIRTWSNSRG 195
Query: 242 DGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEW 301
+GK+FS DL+D + GEIR T F D+FY+++E+G+VY IS+ +LKPA K FN+LKN++
Sbjct: 196 EGKLFSMDLID-ESGEIRCTAFRNECDKFYDMLEIGKVYYISRATLKPANKQFNNLKNDY 254
Query: 302 EIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIV-ISVNPSVPILR 360
E+ L S + C + D IP QF F I++I E N I++++GIV S + + R
Sbjct: 255 EMTLIGDSEIIPCHDSGDDIPSLQFDFVSINDINKKEQNDIMNILGIVKYSGDLQILTSR 314
Query: 361 KNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFS 420
+G E ++R ++L D S +V LTLWG E D PVL+VK ++ +F+
Sbjct: 315 NSGRELRKRDVSLVDESNTTVTLTLWGSQA--------EEFDGSSNPVLAVKGARITEFN 366
Query: 421 -GKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQ 479
GK++ T+ ST L I+PD AH LR WF++ G+N S+S+ + +E+ T +
Sbjct: 367 GGKNLSTLSSTVLQIDPDLPAAHRLRGWFNTMGRNEEATSLSKPFGSTTGVSELWITFQE 426
Query: 480 IKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKK-VTQSGNRWQCDRC 538
K+ LG + D TV+A + I+ ++ Y ACP C KK V Q+ + ++C++C
Sbjct: 427 AKDMELGY-KNSDIYTVKATLNMIRMENAIYKACP----SENCKKKLVDQANDMYRCEKC 481
Query: 539 NQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDV-RFGE 597
++E YR L + D T WVTAF + E+IL A+EL LK ++D+ + E
Sbjct: 482 DKEYPNYRYRLLANISLADWTDNQWVTAFNDEAEKILSSTAQELGELK---ENDIDAYSE 538
Query: 598 IIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
F ++F++++K E++GDE R++ T + ++Y + +L+ I
Sbjct: 539 KFSEATFKSFIFKIRVKVEVFGDENRLRATCLGVSPMDYKLYNNHLITQI 588
>gi|387916032|gb|AFK11625.1| replication protein A [Callorhinchus milii]
Length = 611
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 215/655 (32%), Positives = 348/655 (53%), Gaps = 63/655 (9%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLIGSTQERYRFLISDSVSTQHA-MLATQLNDRVK 63
L+ SI+ + G+ S+PL+QV+ I+ I + RYR L+SD + T + MLATQL V
Sbjct: 6 LSGGSIASMVQGEAPSQPLLQVISIRPIANGPPRYRLLLSDGIHTLSSFMLATQLTPMVD 65
Query: 64 TGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCE----PIGNPKIFSESELTAQK 119
G++ V Q+ ++C+T+++ + +VV+ ++ IGNP FSE++
Sbjct: 66 EGRIAIHDVCQINKFLCNTLKDGRRVVVVLDLKVVKTAHQVNGKIGNPVPFSENQTQQSG 125
Query: 120 TIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSF 179
+++ +P P +G + S +P P G + ++
Sbjct: 126 LTATSSTVRP--------PQNG---------YASNDP-------------PAQGGLAKTE 155
Query: 180 QPTVQPP--YQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYN 237
T+ P + PN A+++PIA LNPYQ +W I+ARVT K +R ++
Sbjct: 156 SRTLSKPSGVKTLPN-------TPGGTQAKVVPIACLNPYQSKWTIRARVTNKSQIRTWS 208
Query: 238 NARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHL 297
N+RG+GK+FS +LLD + GEIR F VD+F+ +IEV +VY +SKG+LK A K + +
Sbjct: 209 NSRGEGKLFSIELLD-ESGEIRAAAFTDQVDKFFPLIEVNKVYYVSKGTLKTANKQYTSV 267
Query: 298 KNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVP 357
KN++E+ +TV C ++ D++PK QF F I ++++ ++++D+IG+ S
Sbjct: 268 KNDYEMTFNNDTTVIPC-DDGDNLPKVQFEFIPIDQLDTKNKDTMIDIIGVCKSYEEVSK 326
Query: 358 I-LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKV 416
I +R E +R + L D SG+ V TLWG+ K D PVL++K ++
Sbjct: 327 ITVRTTNREVSKRNVQLLDMSGKIVTATLWGEDAEK--------FDGSGQPVLAIKGARL 378
Query: 417 NDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISR-EIAAGGAKNEIHK 475
+D+ G+S+ S+ L +NPD EA +LR WFD+ G+ +SIS + + G N K
Sbjct: 379 SDYGGRSLSVTSSSTLMVNPDIPEAFKLRGWFDTEGQVVEGISISDLKGGSFGGGNSNWK 438
Query: 476 TVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQ 534
T+ + K+E LG EK D+ T I ++K ++ Y ACP CNKKV Q ++
Sbjct: 439 TLMEAKSENLGHGEKADYYTCVGTIVYLKKENCMYQACPT----SDCNKKVIDQQNGLYR 494
Query: 535 CDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVR 594
C++C++E YR +L + D WVT FQE+GE ILG LY+ + + ++
Sbjct: 495 CEKCDREFPNFKYRLILSVNLADFGDNQWVTCFQETGEGILG--QNCLYLGELKDSNEQA 552
Query: 595 FGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
F EI + F Y R+++K E Y DE R+K T++ V++ S+ L+ I K
Sbjct: 553 FEEIFQQANFRSYTCRIRVKLETYNDESRIKATMMDVKPVDHKEYSKRLIMNIRK 607
>gi|325187250|emb|CCA21790.1| replication protein A 70 kDa DNAbinding subunit puta [Albugo
laibachii Nc14]
Length = 612
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 210/642 (32%), Positives = 335/642 (52%), Gaps = 58/642 (9%)
Query: 21 KPLVQVMDIKLI----GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLI 76
+P +Q++DIK I G+ +RYR ++SD S MLATQL ++ +K+ VVQL
Sbjct: 12 EPWLQIIDIKKIKPASGAGSDRYRIILSDGTSFISGMLATQLVPLMQNESLKENFVVQLK 71
Query: 77 DYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYS 136
DY+ + VQ R+I++VL++ I E IGNP+ ES + + PS +P P
Sbjct: 72 DYLGNDVQGRRILIVLSLGEIKPAYERIGNPQSI-ESINAGRASTPSLGVPVP------- 123
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNH 196
P S +P + ++ + + R+ + + NH
Sbjct: 124 ------------------KPLSIPSP---SVQSLSINQLTRTEMTSSTHAVDGQSSISNH 162
Query: 197 -GPILKNEAPARIIPIAALNPYQ-GRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSD 254
G +++ + R+ I +LNPY GRW IKARVT + ++ + NARG GK+FS DLLDS
Sbjct: 163 KGSVVREDPNIRLSDIQSLNPYAGGRWTIKARVTNRAPIKNWTNARGQGKLFSIDLLDSK 222
Query: 255 GGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLC 314
GGEIR T FN VD+FY+++ G+V+ S G ++ A + F+ + N++EI + S + L
Sbjct: 223 GGEIRATMFNDAVDKFYDVLRPGQVFYFSGGKIRMANRKFSSVNNDYEITFDQHSEISLA 282
Query: 315 TEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLK 374
+ +D I + ++F+ I +E ++ +DVIG+V V P I+ K G + +R L L
Sbjct: 283 S-DDRGIQQMNYNFKKIGTLEKLPADANIDVIGVVKQVEPMSEIISKAGKQLFKRDLVLV 341
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
D S V +TLW ++ QE VL++K ++++++G+SIGT+ S+ +
Sbjct: 342 DDSMAEVRVTLW-------NERAQEDCSSWTNNVLAIKGCRISEYNGRSIGTLSSSSFNV 394
Query: 435 NPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEI----HKTVSQIKNEGLGRSEK 490
NP EA L W+++GG + T S+S + G + + IK LG +K
Sbjct: 395 NPTIPEAGFLLSWYNNGGSTSETTSLSVGSSGFGGGSLGSFAERANLMDIKARQLGFDQK 454
Query: 491 PDWVTVRAFITFIKSDS-FCYTACPLMIGDRQCNKKVTQS-GNRWQCDRCNQEIDECDYR 548
PD++TV+ + +IK DS Y AC +CNKKV + C++C C+ R
Sbjct: 455 PDYITVKGTVNYIKHDSGLYYQACT------KCNKKVIADVAQNYSCEKCQTVYKTCENR 508
Query: 549 YLLQAQIQDQTGLTWVTAFQESGEEILGC-PAKELYMLKYELQDDVRFGEIIRSRVFNQY 607
Y++ I D TG +WVT F + G IL A E+ +K + F + + +F Y
Sbjct: 509 YIMSLVIADHTGSSWVTCFNDQGRVILNKRTADEIAEIKD--TNTALFEAVFKEALFKSY 566
Query: 608 LFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
++RL+IK E E RVK+ V+ + ++Y ES+ LL ISK
Sbjct: 567 VWRLRIKAENVQGESRVKVNVVNLEPIDYVKESKDLLHAISK 608
>gi|355767985|gb|EHH62675.1| Replication protein A 70 kDa DNA-binding subunit, partial [Macaca
fascicularis]
Length = 499
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 184/476 (38%), Positives = 277/476 (58%), Gaps = 23/476 (4%)
Query: 182 TVQPPYQPPPNF-RNHGPILKNEA---PARIIPIAALNPYQGRWAIKARVTAKGDLRRYN 237
TV Y F + GP L N + ++++PIA+L PYQ +W I ARVT K +R ++
Sbjct: 37 TVSKAYGASKTFGKAGGPSLSNTSGGTQSKVVPIASLTPYQSKWTICARVTNKSQIRTWS 96
Query: 238 NARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHL 297
N+RG+GK+FS +L+D + GEIR T FN VD+F+ +IEV +VY SKG+LK A K F +
Sbjct: 97 NSRGEGKLFSLELVD-ESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAV 155
Query: 298 KNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVP 357
KN++E+ ++V C E+D +P QF F I ++ES +S+VD+IGI S +
Sbjct: 156 KNDYEMTFNNETSVMPC-EDDRHLPTVQFDFTGIDDLESKSKDSLVDIIGICKSYEDATK 214
Query: 358 I-LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKV 416
I +R N E +R + L DTSG+ V TLWG+ +K Q PVL++K +V
Sbjct: 215 ITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDADKFDGSRQ--------PVLAIKGARV 266
Query: 417 NDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHK 475
+DF G+S+ + S+ + NPD EA++LR WFD+ G+ VSIS + G G N K
Sbjct: 267 SDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQALDGVSISDLKSGGVGGGNTNWK 326
Query: 476 TVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQ 534
T+ ++K+E LG+ +KPD+ + A + +++ ++ Y ACP + CNKKV Q ++
Sbjct: 327 TLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLYR 382
Query: 535 CDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVR 594
C++C+ E YR +L I D WVT FQES E ILG A L LK +++
Sbjct: 383 CEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELK--DKNEQA 440
Query: 595 FGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
F E+ ++ F ++FR+++K E Y DE R+K TV+ V+Y R L+ I +S
Sbjct: 441 FEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKSVDYREYGRRLVLSIRRS 496
>gi|343887032|gb|AEM65192.1| replication protein A 70kDa DNA-binding subunit [Kryptolebias
marmoratus]
Length = 610
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 207/658 (31%), Positives = 344/658 (52%), Gaps = 74/658 (11%)
Query: 3 VNLTPNSISLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLN 59
+ L+ +I + G+ + ++Q+++I+ I GS R+R ++SD T + ML+TQLN
Sbjct: 2 MKLSEGAIEALANGNGWNDAILQLVNIRKIDGGSGPARFRVMMSDGRDTLSSFMLSTQLN 61
Query: 60 DRVKTGQVKKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCE---PIGNPKIFSESEL 115
+ + + L ++ + +++ R+++++L ++ + E IG+P +
Sbjct: 62 FMAEENILAPNCICNLKGHVTNILKDGRRVVIILEIDVLKSANEVAGRIGDPTPY----- 116
Query: 116 TAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSG----TFNSQNPGSFSTPNSGTFRAPN 171
F+ QN G + P P + + N
Sbjct: 117 ---------------------------FDGQNKGLQQAPAPAPAPAPAPVPETRPLQQQN 149
Query: 172 AGSIVRSFQPTV---QPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVT 228
+ R + + PP P + ++++PIA+LNPYQ +W ++ARVT
Sbjct: 150 RNEVSRGYNRDLVKKAPPAMP----------VTPGGGSKVVPIASLNPYQSKWTVRARVT 199
Query: 229 AKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLK 288
K +R ++N+RGDG++FS +++D + GEIRVT FN VD+FY +IEVG+VY ++KGSLK
Sbjct: 200 NKSSIRTWSNSRGDGRLFSMEIVD-ESGEIRVTAFNQEVDKFYSLIEVGKVYYVTKGSLK 258
Query: 289 PAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGI 348
A K + +KN++E+ L ST+ C E++ +P Q F I+++E E ++IVDVIG+
Sbjct: 259 IANKQYTSVKNDYEMTLNGESTIIPC-EDNCDVPMVQCDFIPIADLEKREKDAIVDVIGV 317
Query: 349 VISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPV 408
SV+ + K+ E +R LNL D SG+ V + LWG+ E +K D P+
Sbjct: 318 CKSVDEVTRLTTKSNREVSKRTLNLMDMSGKMVSVILWGE----EAEKF----DGSEQPI 369
Query: 409 LSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSIS-REIAAG 467
+++K K++DF G+SI S+ L INPD EA+++R WFD+ G S++ R
Sbjct: 370 VAIKGAKLSDFGGRSISASFSSTLMINPDIPEAYKIRGWFDNEGHTVVGQSLTERRGTGI 429
Query: 468 GAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT 527
I KT+S++K E LG ++ D+ + A I +++ ++ Y ACP + CNKKV
Sbjct: 430 IGGIHIWKTLSEVKAEHLGHGDEADYFSCTATIVYLRKENCLYQACP----SQDCNKKVI 485
Query: 528 -QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLK 586
Q ++C++C++E YR +L A I D WVT FQES E ILG A L LK
Sbjct: 486 GQQNGMFRCEKCDKEFPNFKYRLILSANIADYGDNQWVTCFQESAEAILGQNAAYLGQLK 545
Query: 587 YELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
+ ++ F E+ + FN +F ++K E Y DE R+K V+ V++ R L+
Sbjct: 546 H--SNESAFDEVFQKANFNTLIFHNRVKLETYNDESRIKAPVLSVAPVDHIEYIRRLM 601
>gi|392871534|gb|EJB12179.1| replication factor-a protein 1 (rpa1) [Coccidioides immitis RS]
Length = 607
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 205/660 (31%), Positives = 337/660 (51%), Gaps = 77/660 (11%)
Query: 1 MPVNLTPNSISLI--NGGDVNSKPLVQVMDIKLIGSTQ---ERYRFLISDSVSTQHAMLA 55
M N+T ++S I + + +KP+VQ + +KL+ S +RYR + SD + MLA
Sbjct: 1 MANNITVGALSAIFDDTKEKVAKPIVQCLHVKLLSSPSGGPDRYRAVFSDISNFVQTMLA 60
Query: 56 TQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSES 113
+ LND V G +++G VQL + + V+ ++I++VL+++ + + +CE IG+PK
Sbjct: 61 SSLNDLVNNGALRRGCFVQLKSFQANFVKGKRILIVLDLDVLEDLGECERIGDPKPLETK 120
Query: 114 ELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
+K P+ + + G + + S + P
Sbjct: 121 VAEVEKPTPTA--------------------ISSDGFYGVVSEHSVAQPQRHQ------- 153
Query: 174 SIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDL 233
R+ PT+ P + A I PI AL+PY +W IKAR T K +
Sbjct: 154 ---RATVPTMAPTH------------------ANIYPIEALSPYSHKWTIKARCTNKSAI 192
Query: 234 RRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQK 292
+++ N G+G++FS +LLD D GEIR T F D Y + E G VY IS ++ A++
Sbjct: 193 KKWYNRNGEGRLFSVNLLD-DSGEIRATAFKEQCDLLYPLFEEGSVYYISSPCRVQMAKR 251
Query: 293 NFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV 352
F+++ N++E+ E + ++ + +D +P+ +F+F I + S E + +DV+G++ +V
Sbjct: 252 EFSNVNNDYELTFERDTVIERAEDHED-VPQMRFNFTSIGHLHSVEKGTTIDVLGVLKTV 310
Query: 353 NPSVPILRKN-GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSV 411
P + K+ G +R L L D +G SV LT+WG DV V++
Sbjct: 311 EPVAEVPSKSTGKRYTKRELMLVDDTGYSVPLTIWGGMATS--------FDVMPDSVVAF 362
Query: 412 KSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGK--NAATVSISREIA-AGG 468
K KV+DF G+S+ + S + +PD EAH+L+ W+D+ GK AT ++S A + G
Sbjct: 363 KGVKVSDFGGRSLSLLNSGTITSDPDIEEAHKLKGWYDAQGKFDQFATHALSENAAISTG 422
Query: 469 AKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ 528
+ +I+K + ++++ LG +EKPD+ ++RA + FIK D+ CY AC +CNKKV Q
Sbjct: 423 TRQDIYKAIVEVRDNQLGMTEKPDYFSLRATVVFIKQDTICYPACV----QERCNKKVVQ 478
Query: 529 -SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKY 587
+W C+ C + +YRY+L A + D TG W+ F E G I+G PA L LK
Sbjct: 479 VDPEQWLCEHCEKSSLRPEYRYILSANVSDHTGQLWLNCFDEVGRAIMGMPANVLMELKE 538
Query: 588 ELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
DD E I + + K K + + ++ RV+ V+ A +N+S ES L+ LI
Sbjct: 539 --SDDKAASEAILHATCQMWNLKCKAKLDNFQNQPRVRYQVLGASPINFSHESSRLVSLI 596
>gi|296416099|ref|XP_002837718.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633601|emb|CAZ81909.1| unnamed protein product [Tuber melanosporum]
Length = 614
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 207/658 (31%), Positives = 337/658 (51%), Gaps = 70/658 (10%)
Query: 6 TPNSISLINGGDVNS-----KPLVQVMDIKLIGS---TQERYRFLISDSVSTQHAMLATQ 57
TP ++ + D+ + P++QV+ IK + + ERYR + SD+ + +MLATQ
Sbjct: 7 TPGALQRVFEADIPTPDSFPNPILQVLQIKSLAAQPGAPERYRVVFSDTQNFIQSMLATQ 66
Query: 58 LNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIIL--DCEPIGNPKIFSESEL 115
V G ++KG VQL +Y + V+++KI++V+ +E + E IG P
Sbjct: 67 ATAHVLDGSIEKGCFVQLTNYQANKVKDKKILIVIGLEVLTQYGKQEKIGEPV------- 119
Query: 116 TAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAP----N 171
++ ++ PQ AP+ +QN + +T G AP
Sbjct: 120 ----SLEASQRPQ--------APDRAR---------AAQNEKASATSFYGNRPAPAPAEQ 158
Query: 172 AGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKG 231
G R QPT P R + I PI +L+PYQ RW I+ARVT K
Sbjct: 159 RGVPARQAQPTTTARSSAPSATRPN-----------IYPIESLSPYQNRWTIRARVTYKS 207
Query: 232 DLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQ 291
++ + N+ DG++F+ LLD + GE+R T FN VD FYE+++ G+VY IS + A+
Sbjct: 208 PIKLWQNSNRDGRLFNVTLLD-ESGEVRATGFNDQVDSFYEVLQEGQVYYISNCKVNFAK 266
Query: 292 KNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVIS 351
K F+++ N++E+ E + ++ C + DD IP +F+F SE+ES +N+ I+DVIG++
Sbjct: 267 KQFSNINNDYELAFERNTEIEKCNDVDDGIPMARFNFVQFSELESIQNDGIIDVIGVIKE 326
Query: 352 VNPSVPILRKNGMET-QRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLS 410
V I KN ++ +R + L D SG SV +T WG +L E+V +
Sbjct: 327 VGEVASIQSKNTQKSYTKRDVTLVDKSGYSVHITTWGKSAEDWETQLDEIV--------A 378
Query: 411 VKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAK 470
K KV+++ G+S+ + S+ + +NPD E+H LR W+D G+ T ++
Sbjct: 379 FKGVKVSEYGGRSLSMLHSSTMTVNPDIDESHALRGWYDGQGR-GETFQSHHTGSSAVRT 437
Query: 471 NEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-S 529
N+ +KT+SQI++E LG E PD T +A I +IK+++F Y AC +CNKKV + +
Sbjct: 438 NDPYKTLSQIRDENLGMGEDPDIFTTKATIVYIKNENFSYPACLT----PKCNKKVVEIA 493
Query: 530 GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYEL 589
+W+C++C+ C +RY++ D GL W + F + G I+G A EL L +
Sbjct: 494 EGQWKCEKCDITHPNCQHRYIMTISCSDAFGLAWFSCFDDVGIMIMGMTADELVELNNQ- 552
Query: 590 QDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
F + Y+FR + K ++ +QRV+ V+ A VN++ E+ L+ I
Sbjct: 553 SGGPAFADAFLQANCKAYVFRCRAKMDVSQGQQRVRYQVLNAAPVNFALEAHKLIGQI 610
>gi|380025907|ref|XP_003696705.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Apis florea]
Length = 601
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 214/652 (32%), Positives = 338/652 (51%), Gaps = 87/652 (13%)
Query: 12 LINGGDVNSKPLVQVMDIKLIGSTQ--ERYRFLISDSVSTQH-AMLATQLNDRVKTGQVK 68
++NG DV+ KP++Q++ K + S+ ERYR L+SD MLATQLN + +
Sbjct: 12 IMNGIDVD-KPVLQILGHKKLSSSSSGERYRLLVSDGKRVNSFTMLATQLNSMITDNILT 70
Query: 69 KGSVVQLIDYICSTVQN----RKIIVVLNMETIILDCE---PIGNP-KIFSESELTAQKT 120
+ S+ Q+ Y S V N ++++V+LN++ + E IGNP +E + +
Sbjct: 71 EFSICQINRYAISMVNNAGKQKRVMVILNIDLKVSGDEVGHKIGNPTNAETEGDSKQAQI 130
Query: 121 IPSNNLPQPVRVNNYSAPN-SGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSF 179
+ S QPV + N N+Q S T N +TP
Sbjct: 131 VQSAQSAQPVPQQQSNITNLKSNHNMQQSSTNNIS-----TTP----------------- 168
Query: 180 QPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNA 239
I AL+PYQ RW IKARV +K ++R ++N+
Sbjct: 169 -------------------------------IVALSPYQNRWVIKARVVSKSNIRTWSNS 197
Query: 240 RGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKN 299
RG+GK+FS DL+D + GEIR T F D+FY+++E+G+VY IS+ +LKPA K FN+LKN
Sbjct: 198 RGEGKLFSMDLID-ESGEIRCTAFRNECDKFYDMLEIGKVYYISRATLKPANKQFNNLKN 256
Query: 300 EWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVI-SVNPSVPI 358
++E+ L S + C + D IP QF F I++I E N I+D++GIV S + +
Sbjct: 257 DYEMTLIGDSEIIPCHDSGDDIPSLQFDFVSINDINKKEQNDIMDILGIVKNSGDLQILT 316
Query: 359 LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVND 418
R +G E ++R +NL D S V LTLWG E D PVL+VK ++ +
Sbjct: 317 SRNSGRELKKRDVNLVDESNTMVTLTLWGSQA--------EEFDGSSNPVLAVKGARITE 368
Query: 419 FS-GKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTV 477
F+ GK++ T+ ST L I+PD AH LR WF++ G+N S+S+ + +E+ T
Sbjct: 369 FNGGKNLSTLSSTVLQIDPDLPAAHRLRGWFNTMGRNEEATSLSKPFGSTTGVSELWITF 428
Query: 478 SQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKK-VTQSGNRWQCD 536
+ K+ LG + D TV+A + I+ ++ Y ACP C KK V Q+ + ++C+
Sbjct: 429 QEAKDMELGY-KNSDIYTVKATLNMIRMENAIYKACP----SENCKKKLVDQANDMYRCE 483
Query: 537 RCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDV-RF 595
+C++E YR L + D T W+TAF + E+IL A+EL LK ++D+ +
Sbjct: 484 KCDKEYPNYRYRLLANISLADWTDNQWITAFNDEAEKILSSTAQELGELK---ENDIDAY 540
Query: 596 GEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
E F ++F++++K E++GDE R++ T + ++Y + +L+ I
Sbjct: 541 SEKFSEATFKSFIFKIRVKVEVFGDENRLRATCLGVSPMDYKLYNNHLITQI 592
>gi|425772845|gb|EKV11231.1| hypothetical protein PDIP_56740 [Penicillium digitatum Pd1]
gi|425773582|gb|EKV11927.1| hypothetical protein PDIG_47360 [Penicillium digitatum PHI26]
Length = 1107
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 212/642 (33%), Positives = 342/642 (53%), Gaps = 81/642 (12%)
Query: 21 KPLVQVMDIKLIGSTQ---ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLID 77
+P+VQ + IK + + ERYR + SD + MLATQ N V G ++KGS V+L
Sbjct: 27 EPIVQCVQIKALPAQPNQPERYRAVFSDIANYVQTMLATQANSVVTDGSLRKGSFVRLKS 86
Query: 78 YICSTVQNRKIIVVLNMETI--ILDCEPIGNPK---IFSESELTAQKTIPSNNLPQPVRV 132
+ ++V+ +KI+++LN+E + + + E IG PK + +E E Q T S+N
Sbjct: 87 FQSNSVKGKKILIILNLEVLKELGEAEKIGEPKPLEVKAEEEEVGQPTTISSN------- 139
Query: 133 NNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPN 192
G + S+ G+ + PNS RA QP
Sbjct: 140 ----------------GFYGSKTGGAQAQPNS---RA--------------QPMSASMST 166
Query: 193 FRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLD 252
H A I PI A++PY +W IKAR T+K ++ ++N G+GK+FS +LLD
Sbjct: 167 SSAH---------ATIYPIEAISPYSNKWTIKARCTSKSSIKTWHNKNGEGKLFSVNLLD 217
Query: 253 SDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTV 311
D GEIR T FN D YE+ + G VY IS ++ A+K F +L N++E+ E + V
Sbjct: 218 -DSGEIRGTGFNDQCDMLYELFQEGSVYYISSPCRVQIAKKQFTNLNNDYELTFERDTIV 276
Query: 312 DLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRI 370
+ E++D +P+ +F+F ++++++ E ++ DVIG++ V + I K+ G +R
Sbjct: 277 EKAEEQND-VPQIRFNFTTVADLQTVEKDTTTDVIGVLKDVGETSQITSKSTGKPYDKRE 335
Query: 371 LNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPST 430
L L D +G SV LT+WG N V V++ K KV+DF G+S+ + S
Sbjct: 336 LTLVDNTGFSVRLTIWGASANN--------FSVAPESVVAFKGVKVSDFGGRSLSLLSSG 387
Query: 431 QLFINPDFAEAHELREWFDSGGKN---AATVSISREIAAGGAKNEIHKTVSQIKNEGLGR 487
+ ++PD EAH LR W+D+ G++ + S+S + G K + KTV+Q++ E LG
Sbjct: 388 SMTVDPDIGEAHRLRGWYDAQGRSENFTSHASLSNATNSTG-KTDRFKTVAQVREEQLGM 446
Query: 488 SEKPDWVTVRAFITFIKSDS-FCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDEC 545
SE PD+ +++A + +IK DS +CY AC CNKKVT+ +W+C+ C++ +
Sbjct: 447 SETPDYFSLKATVIYIKQDSTWCYPACL----SENCNKKVTELDPGQWRCEMCDKTHLKP 502
Query: 546 DYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFN 605
+YR+++ + D TG W++ F ++G I+G A EL L+ + D FGE+ +
Sbjct: 503 EYRFIMPISVSDHTGQLWLSCFDDTGRNIMGMSADELMQLRED--DPSAFGEVFQGANCQ 560
Query: 606 QYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
+ FR + K + +GD+QRV+ V + +NYS E+ L D+I
Sbjct: 561 TWSFRCRAKIDNFGDQQRVRYQVSSSQAINYSDEASRLADII 602
>gi|145353884|ref|XP_001421229.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581466|gb|ABO99522.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]
Length = 650
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 209/666 (31%), Positives = 346/666 (51%), Gaps = 34/666 (5%)
Query: 1 MPVNLTPNSISLI---NGGDVNSKPLVQVMDIKLIGS------TQERYRFLISDSVSTQH 51
MP LTPN+IS I G + KP+VQV D+K + + +R+R L SD
Sbjct: 1 MPPALTPNAISNILEQTHGSQDFKPIVQVFDLKELKTKPDADDAAKRFRVLASDGGFAAQ 60
Query: 52 AMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFS 111
+ +LN + G++ K +V++L +YI + + R+I++V++ E + IG P+++
Sbjct: 61 GLFGAELNAMCERGEITKFTVLRLREYIVNDLNGRRILIVMDAEVMDRYDAVIGQPRVWQ 120
Query: 112 ESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPN 171
T T + Q R N Y + SG N N + SG
Sbjct: 121 PGTGTNASTGMNAGGMQQQR-NAYGGAPAAQVEGYGSGGGNGANLATEPPRASGGGYGGG 179
Query: 172 AGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKG 231
A + ++ R+ G + +NE P I PI ALNPYQ RW I+AR+T
Sbjct: 180 APAAQGQYR-------------RDGGAVARNEQPRSITPIHALNPYQNRWTIRARITTPL 226
Query: 232 DLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQ 291
+LR Y+NA+G+GKV F +LD+DG EI+ CFN R + G VY ISKG++
Sbjct: 227 ELRSYSNAKGEGKVLGFQVLDADGTEIKCVCFNDTAVRLAGELRQGLVYEISKGAI-VTP 285
Query: 292 KNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVIS 351
++ + ++EI L+ +T C + + I K + F+ +SE+++ +VDVIGI S
Sbjct: 286 RDPRYAIYQYEIKLDNHATFVPCPDAERDIKKMVYKFKKLSELDALNAGDMVDVIGIAYS 345
Query: 352 VNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSV 411
V I++++G ET +R + ++D S S+E TLW + G +++ ++ G PV++V
Sbjct: 346 VGDLTTIMKRDGSETSKRSVMIRDDSDTSIEFTLWDPHSVEIGGQIESLIASGEKPVIAV 405
Query: 412 KSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAA-TVSISREIAAGGAK 470
KS ++ +F GK++GT+ ST + INPD +EA +R WFD GG + G
Sbjct: 406 KSSRLGEFQGKNMGTVSSTMVEINPDSSEATRMRVWFDQGGADKTFNSLSGSGGGGGKGS 465
Query: 471 NEI--HKTVSQIKNEGLGRSEKPDWVTVRAFITFIK--SDSFCYTACPLMIGDRQCNKKV 526
E+ TV +I E + ++E +++ I IK ++ Y ACPL+ G+R C KK+
Sbjct: 466 GELLSFSTVKEIGEELVAKNEGVAYLSCCGIIKHIKLGAEGNFYPACPLLNGERTCQKKL 525
Query: 527 TQ--SGNRWQCDR-CNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELY 583
+ S W+C+R ++I+ D+RY+ D + WV+ F + G++I G A E+
Sbjct: 526 RKDDSTGEWKCERHAGEKIEAADWRYMFSMVCMDHSDEYWVSVFGDKGDKIFGISAAEMK 585
Query: 584 MLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYL 643
+ Y+ + + R+ +I +FN Y R+K+ + Y D R K +++ ++VNY S+ L
Sbjct: 586 EI-YDREPE-RYENMISDALFNDYSLRVKVAVDNYTDVPRAKGSLVEIERVNYVDMSKKL 643
Query: 644 LDLISK 649
+ I+K
Sbjct: 644 IGKIAK 649
>gi|145353961|ref|XP_001421265.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581502|gb|ABO99558.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]
Length = 649
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 209/666 (31%), Positives = 346/666 (51%), Gaps = 34/666 (5%)
Query: 1 MPVNLTPNSISLI---NGGDVNSKPLVQVMDIKLIGS------TQERYRFLISDSVSTQH 51
MP LTPN+IS I G + KP+VQV D+K + + +R+R L SD
Sbjct: 1 MPPALTPNAISNILEQTHGSQDFKPIVQVFDLKELKTKPDADDAAKRFRVLASDGGFAAQ 60
Query: 52 AMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFS 111
+ +LN + G++ K +V++L +YI + + R+I++V++ E + IG P+++
Sbjct: 61 GLFGAELNAMCERGEITKFTVLRLREYIVNDLNGRRILIVMDAEVMDRYDAVIGQPRVWQ 120
Query: 112 ESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPN 171
T T + Q R N Y + SG N N + SG
Sbjct: 121 PGTGTNASTGMNAGGMQQQR-NAYGGAPAAQVEGYGSGGGNGANLATEPPRASGGGYGGG 179
Query: 172 AGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKG 231
A + ++ R+ G + +NE P I PI ALNPYQ RW I+AR+T
Sbjct: 180 APAAQGQYR-------------RDGGAVARNEQPRSITPIHALNPYQNRWTIRARITTPL 226
Query: 232 DLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQ 291
+LR Y+NA+G+GKV F +LD+DG EI+ CFN R + G VY ISKG++
Sbjct: 227 ELRSYSNAKGEGKVLGFQVLDADGTEIKCVCFNDTAVRLAGELRQGLVYEISKGAI-VTP 285
Query: 292 KNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVIS 351
++ + ++EI L+ +T C + + I K + F+ +SE+++ +VDVIGI S
Sbjct: 286 RDPRYAIYQYEIKLDNHATFVPCPDAERDIKKMVYKFKKLSELDALNAGDMVDVIGIAYS 345
Query: 352 VNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSV 411
V I++++G ET +R + ++D S S+E TLW + G +++ ++ G PV++V
Sbjct: 346 VGDLTTIMKRDGSETSKRSVMIRDDSDTSIEFTLWDPHSVEIGGQIESLIASGEKPVIAV 405
Query: 412 KSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAA-TVSISREIAAGGAK 470
KS ++ +F GK++GT+ ST + INPD +EA +R WFD GG + G
Sbjct: 406 KSSRLGEFQGKNMGTVSSTMVEINPDSSEATRMRVWFDQGGADKTFNSLSGSGGGGGKGS 465
Query: 471 NEI--HKTVSQIKNEGLGRSEKPDWVTVRAFITFIK--SDSFCYTACPLMIGDRQCNKKV 526
E+ TV +I E + ++E +++ I IK ++ Y ACPL+ G+R C KK+
Sbjct: 466 GELLSFSTVKEIGEELVAKNEGVAYLSCCGIIKHIKLGAEGNFYPACPLLNGERTCQKKL 525
Query: 527 TQ--SGNRWQCDR-CNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELY 583
+ S W+C+R ++I+ D+RY+ D + WV+ F + G++I G A E+
Sbjct: 526 RKDDSTGEWKCERHAGEKIEAADWRYMFSMVCMDHSDEYWVSVFGDKGDKIFGISAAEMK 585
Query: 584 MLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYL 643
+ Y+ + + R+ +I +FN Y R+K+ + Y D R K +++ ++VNY S+ L
Sbjct: 586 EI-YDREPE-RYENMISDALFNDYSLRVKVAVDNYTDVPRAKGSLVEIERVNYVDMSKKL 643
Query: 644 LDLISK 649
+ I+K
Sbjct: 644 IGKIAK 649
>gi|367036607|ref|XP_003648684.1| hypothetical protein THITE_2106430 [Thielavia terrestris NRRL 8126]
gi|346995945|gb|AEO62348.1| hypothetical protein THITE_2106430 [Thielavia terrestris NRRL 8126]
Length = 610
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 207/638 (32%), Positives = 332/638 (52%), Gaps = 68/638 (10%)
Query: 22 PLVQVMDIKLI-----GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLI 76
P++Q + +K + G +RYR ++SD + MLATQ N V +GQ+ +GS+V+L
Sbjct: 28 PVLQCLQLKTLEGKGPGGGAQRYRVILSDIRNYVQCMLATQANHVVHSGQLDRGSIVRLK 87
Query: 77 DYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYS 136
Y S+V+ + +++VL++E I +GNP+ E P+ V V +
Sbjct: 88 QYQASSVKGKNVMIVLDLEVI----SHLGNPEKIGE--------------PKAVEVR--T 127
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNH 196
P+S T +G + G S P S T + VQ P
Sbjct: 128 QPHSTTIG--GAGFY-----GVKSEPASET-------------KSQVQKQVASRPAAAAS 167
Query: 197 GPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGG 256
G A + I PI AL+PY +W IK RVT+K D+R ++ A GDGK+FS +LLD + G
Sbjct: 168 GS--GGHAASTIYPIEALSPYSNKWTIKVRVTSKSDIRTWHKASGDGKLFSVNLLD-ETG 224
Query: 257 EIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
EIR T FN VD+FY++++ G VY IS ++ A+K F++L N++E+ E + ++
Sbjct: 225 EIRATGFNEQVDQFYDLLQEGSVYYISTPCKVQLAKKQFSNLANDYEMMFERDTVIEKA- 283
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILNLK 374
E+ S+P+ +F+F +I E+ E ++ VDVIG++ V I+ K + +R L L
Sbjct: 284 EDQSSVPQLRFNFCNIEELRDVEKDATVDVIGVLKEVGEVTEIISKTTQKPYDKRELTLV 343
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
D +G SV +T+WG K D ++++K +V+DF G+S+ + S + I
Sbjct: 344 DDTGFSVRVTIWG--------KTATEFDANPESIIALKGTRVSDFGGRSLSLLSSGTMAI 395
Query: 435 NPDFAEAHELREWFDSGGKNAATVSISR--EIAAGGAKNEIHKTVSQIKNEGLGRSEKPD 492
+PD EAH+L+ W+DS G+N A + S + A + + KT+ Q+K+E LG +
Sbjct: 396 DPDIPEAHKLKGWYDSTGRNNAFATHSNLASVGAAAGRKDDTKTIGQVKSEKLGFDDAV- 454
Query: 493 WVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLL 551
+ TV+A I I+ ++F Y AC CNKKVT G+ W+C++CN D YRY++
Sbjct: 455 YFTVKATIVHIRQENFAYPACR----SENCNKKVTDMGDGTWRCEKCNLSHDRPQYRYIM 510
Query: 552 QAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRL 611
+ D TG W+ F +S I+G A EL ++ D + + FR
Sbjct: 511 SINVSDHTGQMWLNCFDDSARIIMGKTADELVEMQ-ATGDKEGLDAAFEAANCRKLTFRC 569
Query: 612 KIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+ K + YGD+ RV+ V+ A ++Y +E L +LI +
Sbjct: 570 RAKMDTYGDQPRVRYQVMSAAPLDYKTEGHKLAELIQQ 607
>gi|212528756|ref|XP_002144535.1| replication protein A 70 kDa DNA-binding subunit [Talaromyces
marneffei ATCC 18224]
gi|210073933|gb|EEA28020.1| replication protein A 70 kDa DNA-binding subunit [Talaromyces
marneffei ATCC 18224]
Length = 601
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 202/646 (31%), Positives = 341/646 (52%), Gaps = 85/646 (13%)
Query: 20 SKPLVQVMDIKLIG---STQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLI 76
S+P+VQ + IK + + QERYR + SD + M+ATQ N VK G ++KG +V+L
Sbjct: 26 SEPIVQCVQIKPLAPQPNGQERYRAVFSDISNYVQTMIATQANHLVKDGILRKGCLVRLK 85
Query: 77 DYICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNN 134
+ + ++ +KI+++L++E + + + E IG+PK +KT P+
Sbjct: 86 SFQSNAIKGKKILIILDLEVLQHLGEYEKIGDPKPLETKAEDEEKTTPTM---------- 135
Query: 135 YSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFR 194
+ +G ++++ P T N R ++
Sbjct: 136 ----------ISGNGVYSTKAPTGHGTHN---LRQTSSS--------------------- 161
Query: 195 NHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSD 254
A I PI A++PY +W IKAR T+K ++ ++ + +GK+FS +LLD D
Sbjct: 162 ---------GHATIYPIEAISPYSHKWTIKARCTSKSAIKTWHRSNSEGKLFSVNLLD-D 211
Query: 255 GGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVDL 313
GEI+ T FN D Y+I + G VY IS ++ A+K F++L N++E+ E + V+
Sbjct: 212 SGEIKATGFNDQCDLLYDIFQEGSVYYISSPCRVQIAKKQFSNLNNDYELTFEKDTIVEK 271
Query: 314 CTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILN 372
E+ DS+P+ +F+F I +++S E ++ +DVIG++ V + I K + +R L
Sbjct: 272 A-EDQDSVPQVRFNFTTIGDLQSVEKDTTIDVIGVLKEVGQTSQITSKTTNKPYDKRDLT 330
Query: 373 LKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFP--VLSVKSGKVNDFSGKSIGTIPST 430
L D +G SV LT+WG+ + P V++ K KV+DF G+S+ + S
Sbjct: 331 LVDNTGFSVRLTVWGNLA----------TNFNTLPESVVAFKGVKVSDFGGRSLSLLSSG 380
Query: 431 QLFINPDFAEAHELREWFDSGGKN---AATVSISREIAAGGAKNEIHKTVSQIKNEGLGR 487
++PD EAH L+ W+D+ G++ A+ S+S + +GG K + +KT++QI+ E LG
Sbjct: 381 TFTVDPDIEEAHRLKGWYDAQGRSDTFASHASMSDGVTSGGGKLDQYKTIAQIREEQLGM 440
Query: 488 SEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECD 546
SE D+ +++A I +IK D+ Y ACP + CNKKV++ +W+C+RC++ + +
Sbjct: 441 SEAADFFSLKATIIYIKQDNVSYPACP----SQDCNKKVSELDPGQWRCERCDKTYPKPE 496
Query: 547 YRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQ 606
YRY++ + D TG W+ F E G I+G A +L + E ++ E+ +
Sbjct: 497 YRYIMLINVSDHTGQLWLNCFDEVGRLIMGTTADDL--VNMEAENKYESSELFQEANCQT 554
Query: 607 YLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI-SKSF 651
+ FR K K + YG++QR++ + A VNYS E+ L +LI S SF
Sbjct: 555 WNFRCKAKMDHYGEQQRIRYQISSARPVNYSDEATRLANLIQSYSF 600
>gi|357603407|gb|EHJ63750.1| replication protein A1 [Danaus plexippus]
Length = 598
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 218/658 (33%), Positives = 341/658 (51%), Gaps = 79/658 (12%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLIGST-QERYRFLISDSVSTQH-AMLATQL 58
M +L+ ++ +I G P++QV+ K I S ++R R ++SD + A+L +QL
Sbjct: 1 MSYSLSEGAVEIIMSGGEYDGPVIQVLGHKKIQSRGEDRIRLIVSDGKHSHSLALLNSQL 60
Query: 59 NDRVKTGQVKKGSVVQLIDYICSTVQNR---KIIVVLNMETIILDCE---PIGNPKIFSE 112
N++V +G++ SV+++ Y S+VQ + +++V+LN+ I E +G+P +SE
Sbjct: 61 NNKVFSGELSNYSVIKVDKYFISSVQKKEEKRVMVILNLTIIAPGAEVGKKLGDPIQWSE 120
Query: 113 SELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNA 172
+ + P+PV P S NL S T N
Sbjct: 121 DMTSPSYASTTKAEPKPV-----PTPMS---NL------------------SKTTAGINL 154
Query: 173 GSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGD 232
S V S Q T H PIA+L+PYQ +W IKARV K
Sbjct: 155 NSSVLSSQMT-------------H-------------PIASLSPYQNKWVIKARVMNKTA 188
Query: 233 LRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQK 292
+R ++NA+G+GK+FS DL D + GEIR T F D+FY++I++ +VY IS+ LK A K
Sbjct: 189 IRTWSNAKGEGKLFSMDLCD-ESGEIRATAFKNECDKFYDMIQIDKVYYISRCQLKTANK 247
Query: 293 NFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV 352
+ LKN++E+ A + V C EE +S+P ++ F IS+I ++I+DVIG+ S
Sbjct: 248 QYTTLKNDYEMTFTADTVVSECMEESNSVPSIKYDFMPISDIADKGPDTILDVIGVCKSA 307
Query: 353 NPSVPILRKN-GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSV 411
+ + K+ G ++R L D+SG ++ LTLWG E +K D PV++V
Sbjct: 308 SDIQELTAKSTGKLLKKREATLVDSSGGAITLTLWG----AEAEKF----DGSSNPVVAV 359
Query: 412 KSGKVNDFSG-KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAK 470
K ++ +F+G KS+ + ST + + PD EAH LR W+D+GG + A V IS + GG
Sbjct: 360 KGARLAEFNGSKSLSCLASTIVRVQPDVEEAHRLRGWYDNGGDSMAMVHISARVGQGGGN 419
Query: 471 NEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKK-VTQS 529
E T ++ + LG +K D+ ++ +TF +D+ Y ACP QCNKK V Q
Sbjct: 420 AEWM-TFAEAEERRLGTGDKADYFSLLGVLTFTFADNAVYKACP----QEQCNKKLVDQQ 474
Query: 530 GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYEL 589
++C++CN+E YR LL A + D TG VTAF ES E +LG A+E+ L
Sbjct: 475 NGLYRCEKCNREYPNYKYRLLLGATVSDPTGDQRVTAFNESAEVMLGRSAEEVGRLSD-- 532
Query: 590 QDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
D +G+++ F ++F+ + K E Y DE ++K V+ A V+Y + L+ I
Sbjct: 533 YDKAEYGQLLDHVKFKTFVFKFRTKIETYSDEAKLKTVVMSAQPVDYRDANARLVKSI 590
>gi|452819200|gb|EME26268.1| replication factor A1 [Galdieria sulphuraria]
Length = 648
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 215/675 (31%), Positives = 349/675 (51%), Gaps = 71/675 (10%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIK-LIGSTQ-----ERYRFLISDSVSTQHAMLATQL 58
L+ S+ I G+ + ++QV+++K +I S Q ERYR ++SDS Q +ML+TQL
Sbjct: 7 LSVGSVKAIYAGETTQQAVLQVLELKKIIPSGQNVPQTERYRMVLSDSRHYQQSMLSTQL 66
Query: 59 NDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESE---- 114
N V+ +V+ G +V+L++Y+ + V ++II+VLN+E + E IGNP +++
Sbjct: 67 NALVREQKVQTGCLVRLLEYVVNDVAQKRIIIVLNLEPVTGPLEKIGNPVNVEQAQNVQT 126
Query: 115 ---------LTAQKT-IPSN-NLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPN 163
L+ Q + +PS+ +L QP + + + N+ S N + +
Sbjct: 127 GLGSKMRDNLSEQPSRVPSSTDLKQPQTLPEFPNKITRESEKHNASVPLSANSVNIQSNR 186
Query: 164 SGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAI 223
+ +F + V +P V +P + IA+LNPYQ +W I
Sbjct: 187 TQSFHVKSESGPVVKMEPFVGSNLEP------------------VQSIASLNPYQNKWII 228
Query: 224 KARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLIS 283
K RV+++G++R Y NA+G+G VFSF+++DS I+VT F Y++IE+G+VY IS
Sbjct: 229 KGRVSSRGEIRHYQNAKGEGSVFSFEIMDSTAS-IKVTAFRENASSLYKLIEIGKVYRIS 287
Query: 284 KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIV 343
KG LKPA K FN E+E+ + + V + E+ +P F F I+ +E+
Sbjct: 288 KGVLKPADKRFNKTSFEYEMIADNNTEV-VPVEDVGEVPNVIFHFTKIANLENIVAGQFC 346
Query: 344 DVIGIVISVNP-SVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFC-----NKEGQKL 397
DV+GIV V+ S + R G+ +R + L D S +++ LTLW D + EG
Sbjct: 347 DVLGIVKDVSELSSVVSRTTGITLAKRTVVLMDDSLKTIRLTLWKDIAENLLHSSEGN-- 404
Query: 398 QEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAAT 457
P+L K + DF+G S+ + +NPD AEAHELR W+++ GK+ T
Sbjct: 405 ---------PILLCKGVRRGDFNGISLDATVQSCFEVNPDIAEAHELRGWYETTGKHQET 455
Query: 458 VSISREIAAGGAKNEIHKTVSQIKNEGLGRS-EKPDWV--TVRAFITFIKSD-SFCYTAC 513
S+ + + KT+ Q E + + P V VR ++ +I+ + + YTA
Sbjct: 456 SSLEGATSLSLGNTKERKTILQASEEDIPKLINDPRGVQFIVRGYLHYIRKEGTLWYTAS 515
Query: 514 PLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGE 572
P NKKVT+ NRW CD +E C+YRY+L IQD TG AF + G
Sbjct: 516 P------DDNKKVTKLDENRWVCDATGKEYSYCNYRYILSVAIQDATGSLNANAFDDVGS 569
Query: 573 EILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRAD 632
++G A+EL + YE +D F II +F ++FR++ K+ + DE R++ ++ +
Sbjct: 570 RLIGRSAEELAAI-YE-RDRAEFDAIIDDVLFKPFIFRIRAKQNTWNDELRLRYHIVNVE 627
Query: 633 QVNYSSESRYLLDLI 647
+++SSES+ LL+ I
Sbjct: 628 PIHFSSESQLLLNEI 642
>gi|449440852|ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 603
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 199/637 (31%), Positives = 331/637 (51%), Gaps = 76/637 (11%)
Query: 23 LVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICST 82
+VQV+D+K G+ RY F SD V A+L + L V +G ++ +++++DY +
Sbjct: 29 VVQVIDLKATGN---RYMFTASDGVMKLKAILPSNLTSDVISGNIQNLGLIRILDYSLND 85
Query: 83 VQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGT 142
+ N+ I+ CE + +P + E E+ +
Sbjct: 86 IPNKS-----EKYLIVTKCEVV-SPAL--EKEVKTE------------------------ 113
Query: 143 FNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKN 202
T +GT P + +S V N P +
Sbjct: 114 ----------------VKTEEAGTILKPKQELVAKSAAQIVHEQRM------NMAPAARM 151
Query: 203 EAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTC 262
R+ P+ LNPY G W IK RVT KG+LR Y NA+G+G VF+ L D DG +I+ T
Sbjct: 152 SMTRRVQPLVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATM 211
Query: 263 FNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIP 322
FN +FYE +G+VY +S+G+LK A K F ++N++E+ L S VD + E +P
Sbjct: 212 FNDAARKFYEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVP 271
Query: 323 KQQFSFRHISEIESAENN-SIVDVIGIVISVNPSVPILRKNGMETQ-RRILNLKDTSGRS 380
+ +++F I + N +VDVIG+V +V+ ++ I RK ET +R + + D + ++
Sbjct: 272 ETKYNFVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKT 331
Query: 381 VELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAE 440
V ++LW D GQ+L ++ D P++++K +V DF G S+ TI + + INPD E
Sbjct: 332 VVISLWNDLATTVGQELLDIADQS--PIIALKYLRVGDFQGVSLSTISRSSITINPDIKE 389
Query: 441 AHELREWFDSGGK---NAATVSISREIAAGGAKNEIHKTVSQ---IKNEGLGRSEKPDWV 494
AH+LR W+DS GK ++ S G+++ +S ++N+ LG EKP +
Sbjct: 390 AHDLRSWYDSEGKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGE-EKPTFF 448
Query: 495 TVRAFITFIKSD-SFCYTACPLMIGDRQCNKKVTQS-GNRWQCDRCNQEIDECDYRYLLQ 552
++RA+++FIK D + Y AC + CNKKVT++ G+ + CD C + +EC RY++
Sbjct: 449 SIRAYVSFIKPDQTMWYRAC------KTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMV 502
Query: 553 AQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLK 612
++ D +G WV+ F E E I+GC A EL LK ++ ++ + ++ + +LFR+
Sbjct: 503 VRVSDASGEAWVSTFNEEAERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVS 562
Query: 613 IKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+ + Y +E+R +ITV V++++ESR+LL+ I+K
Sbjct: 563 VSQNEYNNEKRQRITVRSVAPVDFAAESRFLLEEIAK 599
>gi|224130162|ref|XP_002328669.1| predicted protein [Populus trichocarpa]
gi|222838845|gb|EEE77196.1| predicted protein [Populus trichocarpa]
Length = 603
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 173/465 (37%), Positives = 282/465 (60%), Gaps = 20/465 (4%)
Query: 195 NHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSD 254
N P + R+ P+ +LNPYQG W IK RVT+KG++R Y NARG+G VF+ +L D D
Sbjct: 144 NMAPAARMAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYRNARGEGCVFNVELTDGD 203
Query: 255 GGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLC 314
G +I+ T FN +FY+ E+G+VY ISKG+L+ A K F ++N++E+ L S V+
Sbjct: 204 GTQIQATMFNEAAKKFYDRFELGKVYYISKGTLRVANKQFKTVQNDYEMTLNENSEVEEA 263
Query: 315 TEEDDSIPKQQFSFRHISEIESAENNS-IVDVIGIVISVNPSVPILRKNGMET-QRRILN 372
++E IP+ +F F I ++ N+ +VDVIGIV SV+P+ I RK+ ET +R +
Sbjct: 264 SDEAACIPETKFKFVPIDQLGPYVNSKDLVDVIGIVQSVSPTTSIRRKSNNETVPKRDIV 323
Query: 373 LKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQL 432
+ D + ++V ++LW + GQ+L ++ D PV+++KS KV DF G S+ T+ + +
Sbjct: 324 VADETKKTVVVSLWNELATSVGQELHDIADKS--PVVAIKSLKVGDFQGISLSTLGKSIV 381
Query: 433 FINPDFAEAHELREWFDSGGKNAATVSISREIA---AGGAKNEIHKTVSQ---IKNEGLG 486
+NP AE+ +LR W+DS GK + S+ ++ GA++ VS N LG
Sbjct: 382 QVNPVIAESEKLRNWYDSEGKETSMASVGSGLSPSTKSGARSMYSDRVSLSHITSNPSLG 441
Query: 487 RSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKKVTQS-GNRWQCDRCNQEIDE 544
+KP + ++RA+I+FIK D + Y AC + CNKKVT + G + C+ C + E
Sbjct: 442 E-DKPAFFSIRAYISFIKPDQTMWYRAC------KTCNKKVTDALGGGYWCEGCQKNDAE 494
Query: 545 CDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVF 604
C RY++ ++ D +G WV+AF E E+I+GC A EL +LK +++++ + + ++ +
Sbjct: 495 CSLRYIMVVKVSDGSGEGWVSAFNEEAEKIIGCSADELDLLKSQIEENT-YQQRLKEATW 553
Query: 605 NQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
N +L R+ + + Y +E+R ++TV V++++ESR+LL+ ISK
Sbjct: 554 NPHLLRISVSQNEYNNEKRQRMTVRAVAPVDFAAESRFLLEEISK 598
>gi|340522901|gb|EGR53134.1| replication factor A-like protein [Trichoderma reesei QM6a]
Length = 600
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 205/639 (32%), Positives = 334/639 (52%), Gaps = 81/639 (12%)
Query: 22 PLVQVMDIKLI---GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
P++Q + IK + G +RYR ++SD V+ MLATQ N + ++++G + ++ Y
Sbjct: 29 PVMQCLQIKQMAPSGQGGDRYRLVMSDGVNYVQTMLATQANHVIHDNKLERGCLTRVKQY 88
Query: 79 ICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYS 136
+ ++ + I+V+L++E I + E IG+P + A+ TI N+ Y
Sbjct: 89 TPNNLKGKNILVILDLEVIESLGVHEKIGDPVVLEPR--AAETTIAGNDF--------YG 138
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNH 196
A + +P +Q P H
Sbjct: 139 AKKEE-----------------------------------QDVKPQMQQLQSMPSRSATH 163
Query: 197 GPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGG 256
+ A I PI AL+P+ +W IKARVT K D++ ++ G+GK+FS +LLD + G
Sbjct: 164 -------SGANIYPIEALSPFSSKWTIKARVTFKSDIKTWHKPTGEGKLFSVNLLD-ESG 215
Query: 257 EIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
EI+ T FN D FY+I++ G VY IS + A+K F++L N++E+ E + ++
Sbjct: 216 EIKATGFNDQCDAFYDILQEGSVYYISSPCRVSLAKKQFSNLPNDYELAFERETVIEK-A 274
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLK 374
E+ ++P+ +F+F I E++S E +S VDVIG++ V I +K+G Q+R L L
Sbjct: 275 EDQTNVPQVRFNFCTIQELQSVEKDSTVDVIGVLKEVGEVSEITSKKDGRPFQKRELTLV 334
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
D +G SV +T+WG K D V++ K KV+DF GKS+ + S + +
Sbjct: 335 DDTGYSVRVTIWG--------KTASSFDANPESVVAFKGTKVSDFGGKSLSLLSSGTMTV 386
Query: 435 NPDFAEAHELREWFDSGGKN---AATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKP 491
+PD +A+ L+ W+DS G+ A +++ A G K EI KT++Q+K+E LG ++
Sbjct: 387 DPDIPDAYRLKGWYDSVGRTDTFATHQNLAGVAGATGRKEEI-KTIAQVKDENLGVDDQA 445
Query: 492 DWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYL 550
+ T++A I F+K DSFCY AC ++ CNKKVT WQC++C+ D+ DYRY+
Sbjct: 446 -YYTIKATIVFVKQDSFCYPAC----SNQGCNKKVTPMPDGTWQCEKCSVSHDKPDYRYI 500
Query: 551 LQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFR 610
+Q + D T W++ F ++G I+G A EL LK DD +F + + +FR
Sbjct: 501 MQLNVADHTSHQWLSCFDDTGRIIVGMSANELMELKE--NDDAKFMAAFEAVNCKKLMFR 558
Query: 611 LKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+ K + +GD QRV+ V+ A ++Y SE L++LI +
Sbjct: 559 CRAKMDNFGDTQRVRYQVMSASLIDYKSEGHKLVELIKQ 597
>gi|149676205|dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea nil]
Length = 604
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 210/670 (31%), Positives = 351/670 (52%), Gaps = 92/670 (13%)
Query: 1 MPVNLTPNSISLI-------NGGDVNSKPLVQVMDIKLIGSTQERYRFLISDSVSTQHAM 53
M ++TP++IS I +G D+ + +VQV+D+K G+ RY F +D A+
Sbjct: 1 MERSVTPDAISAILANPSPDSGSDL-PELIVQVVDLKQAGN---RYMFTANDGKMKLKAI 56
Query: 54 LATQLNDRVKTGQVKKGSVVQLIDYICSTV--QNRKIIVVLNMETIILDCEPIGNPKIFS 111
L + L+ V +G ++ +V+++DY + + +N K + I+ C+ + +P
Sbjct: 57 LQSSLSSEVISGSIQNLGLVRILDYTLNDIPMKNEKYL-------IVTKCDAVSSPL--- 106
Query: 112 ESEL-TAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAP 170
E+E T KT + + +P + F A
Sbjct: 107 EAEYKTGVKTEENGIVLRPKQ----------------------------------EFVAK 132
Query: 171 NAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAK 230
+A IV + PP + R H P+ +LNPYQG W IK RVT+K
Sbjct: 133 SAAQIVHEQNGNIVPPARLAMTRRIH-------------PLVSLNPYQGIWTIKVRVTSK 179
Query: 231 GDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPA 290
G++R Y NARG+G VF+ +L D DG EI+ T FN +FY+ E+G+VY ISKG+L+ A
Sbjct: 180 GNMRFYKNARGEGCVFNVELADQDGTEIQATMFNQAARKFYDKFELGKVYYISKGTLRVA 239
Query: 291 QKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENN-SIVDVIGIV 349
K F ++N++E+ L S V+ E +P+ +F+F I E+ S N +VDVIG+V
Sbjct: 240 NKQFKTVQNDYEMTLNENSEVEEAINEAAFVPETKFNFVAIDELGSYVNGRELVDVIGVV 299
Query: 350 ISVNPSVPILRKNGMET-QRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPV 408
+V+ ++ I RK+ E +R + + D + ++V ++LW D GQ+L +M D PV
Sbjct: 300 QNVSSTMSIRRKSNNEMIPKRDITIADETKKTVVVSLWSDLATNVGQELLDMADKS--PV 357
Query: 409 LSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGG 468
++++S KV DF G S+ I + + +NPD EA +LR W+D GK + S+ +++
Sbjct: 358 VAIRSVKVGDFQGLSLSAITRSTVLVNPDMPEAKKLRSWYDCEGKETSLTSVGSGLSS-S 416
Query: 469 AKNEIHKTVSQ-------IKNEGLGRSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDR 520
AK + S N LG +KP + +++A I+FIK + + Y AC +
Sbjct: 417 AKGVLWSMYSDRVSLLHITSNPNLGE-DKPVFFSIKANISFIKPEQAMWYRAC------K 469
Query: 521 QCNKKVTQS-GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPA 579
CNKKVT++ G+ + C+ C + +C RY++ ++ D +G W++ F E E+I+GC A
Sbjct: 470 TCNKKVTEAIGSGYWCEGCQKNDTDCSLRYIVAMRVSDTSGEAWLSVFNEQAEKIIGCSA 529
Query: 580 KELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSE 639
EL L+ + D + ++ + YLFR+ + + Y +E+R +ITV A V++++E
Sbjct: 530 DELDRLRSQDGDSSAYQMKLKEATWVPYLFRVSVTPQEYNNEKRQRITVRAAAPVDFAAE 589
Query: 640 SRYLLDLISK 649
SRY L+ ++K
Sbjct: 590 SRYFLEEMAK 599
>gi|19111884|ref|NP_595092.1| DNA replication factor A subunit Ssb1 [Schizosaccharomyces pombe
972h-]
gi|2498845|sp|Q92372.1|RFA1_SCHPO RecName: Full=Replication factor A protein 1; AltName:
Full=Single-stranded DNA-binding protein p68 subunit
gi|1502413|gb|AAC49437.1| single-stranded DNA binding protein p68 subunit
[Schizosaccharomyces pombe]
gi|1814272|gb|AAC49694.1| Rpa1 [Schizosaccharomyces pombe]
gi|4049512|emb|CAA22533.1| DNA replication factor A subunit Ssb1 [Schizosaccharomyces pombe]
Length = 609
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 201/664 (30%), Positives = 340/664 (51%), Gaps = 70/664 (10%)
Query: 1 MPVNLTPNSISLINGGDVNS---KPLVQVMDIKLIGS-----TQERYRFLISDSVSTQHA 52
M L+ ++ +IN D +S P++QV+ +K + S +RYR ++SDS++ +
Sbjct: 1 MAERLSVGALRIINTSDASSFPPNPILQVLTVKELNSNPTSGAPKRYRVVLSDSINYAQS 60
Query: 53 MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVL--NMETIILDCEPIGNPKIF 110
ML+TQLN V +++KG+ VQL + + ++ RKI++VL N+ T + + IGNP
Sbjct: 61 MLSTQLNHLVAENKLQKGAFVQLTQFTVNVMKERKILIVLGLNVLTELGVMDKIGNPAGL 120
Query: 111 SESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAP 170
+ Q Q NN SAP +G S + SF N+
Sbjct: 121 ETVDALRQ---------QQNEQNNASAPRTGI----------STSTNSFYGNNAAATAPA 161
Query: 171 NAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAK 230
+ + N I PI L+PYQ +W I+ARVT K
Sbjct: 162 PPPMMKKP--------------------AAPNSLSTIIYPIEGLSPYQNKWTIRARVTNK 201
Query: 231 GDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPA 290
+++ ++N RG+GK+FS +LLD + GEIR T FN VD FY+I++ G VY IS+ + A
Sbjct: 202 SEVKHWHNQRGEGKLFSVNLLD-ESGEIRATGFNDQVDAFYDILQEGSVYYISRCRVNIA 260
Query: 291 QKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVI 350
+K + +++NE+E+ E + + E+ ++P +FSF + E+ ++++DVIG++
Sbjct: 261 KKQYTNVQNEYELMFERDTEIRKA-EDQTAVPVAKFSFVSLQEVGDVAKDAVIDVIGVLQ 319
Query: 351 SVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVL 409
+V P I R +R + + D +G + +TLWG K V +L
Sbjct: 320 NVGPVQQITSRATSRGFDKRDITIVDQTGYEMRVTLWG--------KTAIEFSVSEESIL 371
Query: 410 SVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKN---AATVSISREIAA 466
+ K KVNDF G+S+ + S+ + ++PD E+H L+ W+D G+ A IS ++
Sbjct: 372 AFKGVKVNDFQGRSLSMLTSSTMSVDPDIQESHLLKGWYDGQGRGQEFAKHSVISSTLST 431
Query: 467 GGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKV 526
G E K +++++ E LG SE PD+ +++ I +I+ + Y ACP CNKKV
Sbjct: 432 TGRSAE-RKNIAEVQAEHLGMSETPDYFSLKGTIVYIRKKNVSYPACPAA----DCNKKV 486
Query: 527 TQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLK 586
G W+C++CN+E D YRY++ + D TG W+ F + G+ I+ A EL L+
Sbjct: 487 FDQGGSWRCEKCNKEYDAPQYRYIITIAVGDHTGQLWLNVFDDVGKLIMHKTADELNDLQ 546
Query: 587 YELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDL 646
D+ F + + Y+F+ + K++ + E RV+ TV+ +Q+++ ES+ L++
Sbjct: 547 E--NDENAFMNCMAEACYMPYIFQCRAKQDNFKGEMRVRYTVMSINQMDWKEESKRLINF 604
Query: 647 ISKS 650
I +
Sbjct: 605 IESA 608
>gi|348683769|gb|EGZ23584.1| hypothetical protein PHYSODRAFT_556228 [Phytophthora sojae]
Length = 629
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 219/672 (32%), Positives = 344/672 (51%), Gaps = 71/672 (10%)
Query: 3 VNLTPNSISLINGGDVNS--KPLVQVMDIKLI----GSTQERYRFLISDSVSTQHAMLAT 56
VNLTPN++S++ +P +Q++D K I G+ +RYR ++SD S MLAT
Sbjct: 2 VNLTPNAVSMLYNKQTPDGFEPWLQIIDTKKIKPASGTGGDRYRIVLSDGTSYISGMLAT 61
Query: 57 QLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELT 116
QL ++ +K V+QL DY+ + VQ R+I++VL++ I+ + IGNP+ S+
Sbjct: 62 QLAPMMENESLKTNYVLQLKDYLGNEVQGRRILIVLSIGDIVPAFDRIGNPQSIEGSKGA 121
Query: 117 AQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIV 176
P+ + P + A P +F+ P+A V
Sbjct: 122 PIPAAPAASAPPAASLGARPA-----------------------APVQSSFQQPSAP--V 156
Query: 177 RSFQPTVQPPYQP---------PPNFRNHGPILKNEAPARIIPIAALNPYQG-RWAIKAR 226
+ QPP P P+ N GP+++ + R+ I +LNPY G RW IKAR
Sbjct: 157 NQYN---QPPAAPLSYAPPAKPAPSAYNRGPVVRQDPNVRLSDIQSLNPYAGGRWTIKAR 213
Query: 227 VTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS 286
VT + ++ + NARG GK+FS DLLD+ GGEIR T FN VD+FYE + G V+ + G
Sbjct: 214 VTNRAPIKNWTNARGSGKLFSVDLLDARGGEIRATFFNDGVDKFYETLRPGGVFYFAGGK 273
Query: 287 LKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVI 346
+K A + F+ + N++E+ + S + ED I + ++F+ I+EIES + VDVI
Sbjct: 274 VKMANRRFSSVDNDYEVTFDQHSDISPA-PEDGQISQMNYTFKKIAEIESVPAEANVDVI 332
Query: 347 GIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFF 406
GIV V I K G + +R ++L D S ++ T+W ++ +E
Sbjct: 333 GIVRDVGQVNEITSKAGKQLFKRDISLVDDSNAEIKCTMW-------NERAKEDCSSWLN 385
Query: 407 PVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAA 466
V+++K +V+D++G+SIGT+ S+ +NP EA L WF +GG A T S+S
Sbjct: 386 QVVAIKGCRVSDYNGRSIGTMMSSSFTVNPTIPEAGHLVNWFSNGGNAAQTKSLSSGGGG 445
Query: 467 GGAKNEI----HKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDS-FCYTACPLMIGDRQ 521
G + ++ IK + LG +KPD++TV+ + FIK D+ Y ACP +
Sbjct: 446 FGGGSLGTFAERAVINDIKGKQLGFGQKPDYITVKGTVNFIKHDTGVFYQACP------K 499
Query: 522 CNKKVTQS-GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEIL-GCPA 579
C KKV + C++C C+ RY+L + D TG TW T F + G+ ++ G A
Sbjct: 500 CQKKVVADVAQNYTCEKCQTSYSNCENRYILSVVMLDHTGSTWTTCFNDQGKVVMNGRTA 559
Query: 580 KELYMLKYELQDD--VRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYS 637
E+ EL+D + + +F QY+ RL++K E +E RVK V+ + VN+
Sbjct: 560 DEI----GELRDTNPTLYESTFKEALFKQYVCRLRVKAENVQEELRVKAGVVNLEPVNFV 615
Query: 638 SESRYLLDLISK 649
ES+ LL I++
Sbjct: 616 QESKDLLQAIAQ 627
>gi|242765554|ref|XP_002340998.1| replication protein A 70 kDa DNA-binding subunit [Talaromyces
stipitatus ATCC 10500]
gi|218724194|gb|EED23611.1| replication protein A 70 kDa DNA-binding subunit [Talaromyces
stipitatus ATCC 10500]
Length = 586
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 195/620 (31%), Positives = 328/620 (52%), Gaps = 77/620 (12%)
Query: 36 QERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNME 95
QERYR + SD + M+ATQ N VK G ++KG +V+L + + ++ +KI+++L++E
Sbjct: 30 QERYRAVFSDISNYVQTMIATQANHLVKDGILRKGCLVRLKSFQSNAIKGKKILIILDLE 89
Query: 96 TI--ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNS 153
+ + + E IG+PK +K P+ + +GT+ +
Sbjct: 90 VLQHLGEYEKIGDPKPLETKAEDEEKATPTM--------------------VSGNGTYGA 129
Query: 154 QNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAA 213
+ P S+ + N +A ++G A I PI A
Sbjct: 130 KAPTSYDSRN--VRQASSSGH-------------------------------ATIYPIEA 156
Query: 214 LNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEI 273
++PY +W IKAR T+K ++ ++ + +GK+FS +LLD D GEIR T FN D Y++
Sbjct: 157 ISPYSHKWTIKARCTSKSAIKTWHRSNSEGKLFSVNLLD-DSGEIRATGFNDQCDSLYDL 215
Query: 274 IEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHIS 332
+ G VY IS ++ A+K F++L N++E+ E + V+ E+ DS+P+ +F+F I
Sbjct: 216 FQEGSVYYISSPCRVQIAKKQFSNLNNDYELTFERDTIVEKA-EDQDSVPQVRFNFTTIG 274
Query: 333 EIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILNLKDTSGRSVELTLWGDFCN 391
+++S E ++ +DVIG++ V P+ I K + +R L L D +G SV LT+WG+
Sbjct: 275 DLQSVEKDTTIDVIGVLKEVGPTSQITSKTTNKPYDKRDLTLVDNTGFSVRLTVWGN--- 331
Query: 392 KEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSG 451
L D V++ K KV+DF G+S+ + S + ++PD EAH L+ W+D+
Sbjct: 332 -----LATNFDTLPESVVAFKGVKVSDFGGRSLSLLSSGTMTVDPDIEEAHRLKGWYDAQ 386
Query: 452 GKN---AATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSF 508
G++ + S+S GG K + +KT++QI+ E LG SE D+ +++A I +IK D+
Sbjct: 387 GRSDTFTSHASMSDGTTPGGGKLDQYKTIAQIREEQLGMSEAADFFSLKATIIYIKQDNV 446
Query: 509 CYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAF 567
Y ACP + CNKKV++ +W+C+RC++ + +YRY++ + D TG W+ F
Sbjct: 447 SYPACP----SQGCNKKVSELDPGQWRCERCDKTYPKPEYRYIMLINVSDHTGQLWLNCF 502
Query: 568 QESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKIT 627
E G I+G A EL + E ++ E+ + + FR K K + YG++QR++
Sbjct: 503 DEVGRLIMGTTADEL--VNMEAENKYETSELFQEANCQTWNFRCKAKMDHYGEQQRIRYQ 560
Query: 628 VIRADQVNYSSESRYLLDLI 647
+ A VNYS E+ L + I
Sbjct: 561 ISSAKPVNYSDEAARLANFI 580
>gi|156545235|ref|XP_001604531.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Nasonia vitripennis]
Length = 595
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 208/652 (31%), Positives = 328/652 (50%), Gaps = 86/652 (13%)
Query: 11 SLINGGDVNSKPLVQVMDIKLIGSTQERYRFLISDSVS-TQHAMLATQLNDRVKTGQVKK 69
S+++ G P+ QV + KL+ S +YR I+D + + + +LA+QLN ++ + +
Sbjct: 11 SILDDGVEVEAPVFQVTNYKLVKSGIPKYRLQINDGCTESTYVILASQLNHLIENRNLSE 70
Query: 70 GSVVQLIDYICSTVQ-----NRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSN 124
S+++L Y S ++ RKII I+DCE + +P +
Sbjct: 71 FSIMKLNQYSTSMIRGPDNSERKIIT-------IVDCEIL----------------VPGH 107
Query: 125 NLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQ 184
+ + + NN + A + R PT Q
Sbjct: 108 QIGKNFKKNNT--------------------------------KVEEAVPVTRI--PTNQ 133
Query: 185 PPYQPPPNFRN----HGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAR 240
+P P N PI+ + APA PIAAL+PY RW IKARVT K +R ++N+R
Sbjct: 134 QVARPAPQLNNLVDIMNPIMNSNAPAFTTPIAALSPYHSRWVIKARVTNKSQIRTWSNSR 193
Query: 241 GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNE 300
G+GK FS DL+D + EIR T F D+FY++IE+ +VY ISK LKPA K FNHL+N+
Sbjct: 194 GEGKFFSMDLID-ESSEIRCTAFRDQCDKFYDLIEIDKVYYISKCQLKPANKQFNHLRND 252
Query: 301 WEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILR 360
+E+ L S + +C EE ++IP QF+F IS IE+ N I+D++GIV + + +
Sbjct: 253 YEMSLTYDSQIAICNEETETIPSLQFNFVPISTIETMPTNGIIDILGIVKTCSDLQTFTK 312
Query: 361 K-NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDF 419
+ G E ++ + + D + + +TLW +K Q G PV+++K K+ +F
Sbjct: 313 RLTGQELTKKDVGVVDENNYLINVTLW-------AEKAQNFDGSG-NPVVAIKGAKIGEF 364
Query: 420 S-GKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVS 478
+ GK++ +P++ L +NPD AH+LR WF + G + S+SR GG + T S
Sbjct: 365 NGGKTLSLLPTSILRVNPDIPTAHKLRSWFSTIGATTESHSLSRTSNDGGINGSL-LTFS 423
Query: 479 QIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDR 537
++ LG P T +A + IK+++ Y +CP C KKV QS ++C++
Sbjct: 424 EVDENKLGHPHMPCVYTTKATVNLIKAENALYKSCP----SENCKKKVVDQSNGMYRCEK 479
Query: 538 CNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGE 597
C ++ YR L+ A + D TG W+ AF + E +L EL LK E D +
Sbjct: 480 CAKDYPTFTYRLLVNAYLVDWTGNQWIAAFNDEAEILLNGSGPELGELK-EKDFDAYLKK 538
Query: 598 IIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
I + F Y+F++++K+E + DE R+K TV+ VNY +LL I K
Sbjct: 539 IAETS-FKSYIFKIRVKQETFNDETRLKSTVLSVQPVNYKMYLDHLLSKIQK 589
>gi|313666982|gb|ADR72941.1| replication protein A1 [Brachionus ibericus]
Length = 611
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 211/668 (31%), Positives = 346/668 (51%), Gaps = 82/668 (12%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLIGSTQE---RYRFLISDSVSTQH--AMLATQLN 59
L+ S+ I G+ S P++Q++ +K I + + RY+ + D TQH +LATQ N
Sbjct: 4 LSKGSLKKILDGNNVSDPILQIIQMKNIQNNMDGMTRYKVTLYDG-ETQHTFGILATQKN 62
Query: 60 DRVKTGQVKKGSVVQLIDYICSTVQN---RKIIVVLNMETIILDCEPIGNPKIFSESELT 116
V++ Q++ GSV++L +Y + + + I++LN E I+ + +P P+
Sbjct: 63 SLVESNQLRIGSVIKLEEYAANVLSKDPPKVAIILLNFE-ILGEMDPNSKPQ-------- 113
Query: 117 AQKTIPSNNLPQPVR-VNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSI 175
+N + QP + + N + + N N+ +F S+ F S
Sbjct: 114 -----ATNAISQPSKQIQNENIEPNKPNNQTNTKSFFSKKENDFEKAQSTN--------- 159
Query: 176 VRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRR 235
PP F +I I++LNPYQ +WAIKARVT K ++R
Sbjct: 160 -------------PPGTFNGF----------KIFGISSLNPYQNKWAIKARVTNKSNIRT 196
Query: 236 YNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFN 295
Y+NARG+GK+F+ +L+DS GEIR FN VD+FYE++++ +VY ISK +LK A K +
Sbjct: 197 YSNARGEGKLFNVELIDS-TGEIRANGFNEQVDKFYEMLQIDQVYYISKANLKTANKQYC 255
Query: 296 HLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPS 355
L N++E+ + + C E DD +P+ + I EI + N VDVIG+V SV
Sbjct: 256 KLDNDYEMTFNNETVIQPCEETDD-LPRINLNLVKIKEISNHAANDFVDVIGVVRSVGDV 314
Query: 356 VPILRKN-GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSG 414
I+ K+ E ++R L++ D S ++ TLW G++ ++ +PV+ +K
Sbjct: 315 TTIITKSTNRELKKRELSIVDNSECAITATLW-------GKQAEDYDPSDSYPVILLKGA 367
Query: 415 KVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISRE-IAAGGAK--- 470
K+ D++GK++ +T + INPD EAH ++ WF+ GG + +S + +AA GA
Sbjct: 368 KIGDYNGKTLSVASTTVVQINPDLPEAHTVKGWFEQGGSESDIQDLSSQGMAAAGANSGG 427
Query: 471 ----NEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKV 526
+ K + Q+K+E LG +K D+ + +A++ + K D+ Y ACP CNKK+
Sbjct: 428 PISGHSNWKFLDQLKDEKLGMGDKADYFSTKAYVLYAKKDNSMYMACP----GENCNKKI 483
Query: 527 -TQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYML 585
Q+ ++C++C + +R +L + D W T FQE+ E ILG +EL L
Sbjct: 484 FDQNDGTYRCEKCARNYPNFKWRMILNINLADFAESNWATCFQETAETILGIGTEELGEL 543
Query: 586 KYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLD 645
K +D +F EI F ++ F+L+ K E Y DE+RVK++ + + V+Y+ R +L
Sbjct: 544 KN--SNDPKFDEIFSECAFKEFNFKLRAKMETYNDERRVKVSAVTVEPVDYAQSGRRILQ 601
Query: 646 LISKSFRK 653
I K F K
Sbjct: 602 KI-KQFAK 608
>gi|15241489|ref|NP_196419.1| RPA70-kDa subunit B [Arabidopsis thaliana]
gi|6562316|emb|CAB62614.1| replication factor A-like protein [Arabidopsis thaliana]
gi|332003852|gb|AED91235.1| RPA70-kDa subunit B [Arabidopsis thaliana]
Length = 604
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 203/647 (31%), Positives = 341/647 (52%), Gaps = 76/647 (11%)
Query: 13 INGGDVNSKPLVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSV 72
++ V + +VQV+D+K G+ RY F +D AML L + +G+++ +
Sbjct: 19 LDSSSVRPEIVVQVVDLKPAGN---RYTFSANDGKMKIKAMLPATLTSDIISGKIQNLGL 75
Query: 73 VQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRV 132
++L++Y + + + + +I CE + + +SE+ A+ + + +P
Sbjct: 76 IRLLEYTVNDIPGKSEEKYM----LITKCEAVASAL---DSEIKAEIKASTGIMLKP--- 125
Query: 133 NNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPN 192
F A +A I+ +
Sbjct: 126 -------------------------------KHEFVAKSASQIINEQRG----------- 143
Query: 193 FRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLD 252
N P + R+ P+ +LNPYQG W IK RVT KG +R Y NARG+G VF+ +L D
Sbjct: 144 --NAAPAARMAMTRRVHPLVSLNPYQGSWTIKVRVTNKGVMRTYKNARGEGCVFNVELTD 201
Query: 253 SDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVD 312
+G +I+ T FNA +FY+ E+G+VY IS+GSLK A K F ++N++E+ L S V+
Sbjct: 202 EEGTQIQATMFNAAARKFYDRFEMGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVE 261
Query: 313 LCTEEDDSIPKQQFSFRHISEIESAEN-NSIVDVIGIVISVNPSVPILRKNGMET-QRRI 370
+ E+ P+ +F+F I E+ + N ++DVIG+V SV+P++ I RKN E +R
Sbjct: 262 EASNEEMFTPETKFNFVPIDELGTYVNQKDLIDVIGVVQSVSPTMSIRRKNDNEMIPKRD 321
Query: 371 LNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPST 430
+ L D + ++V ++LW D GQ+L +M D PV+++KS KV F G S+ TI +
Sbjct: 322 ITLADETKKTVVVSLWNDLATGIGQELLDMAD--NHPVIAIKSLKVGAFQGVSLSTISRS 379
Query: 431 QLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG---GAKNEIHKTV--SQI-KNEG 484
+ INP+ EA +L+ W+D+ GK + +I +++ G+++ V S I N
Sbjct: 380 NVVINPNSPEATKLKSWYDAEGKETSMSAIGSGMSSSANNGSRSMYSDRVFLSHITSNPS 439
Query: 485 LGRSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKKVTQSGNR-WQCDRCNQEI 542
LG EKP + + RA+I+FIK D + Y AC + CNKKVT++ + + C+ C ++
Sbjct: 440 LGE-EKPVFFSTRAYISFIKPDQTMWYRAC------KTCNKKVTEAMDSGYWCESCQKKD 492
Query: 543 DECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSR 602
EC RY++ ++ D TG TW++AF + E+I+GC A +L LK E + F ++
Sbjct: 493 QECSLRYIMAVKVSDSTGETWLSAFNDEAEKIIGCTADDLNDLKSEEGEVNEFQTKLKEA 552
Query: 603 VFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
++ +LFR+ + ++ Y E+R +ITV +++++E+R LL ISK
Sbjct: 553 TWSSHLFRISVSQQEYNSEKRQRITVRGVSPIDFAAETRLLLQDISK 599
>gi|392567006|gb|EIW60181.1| replication factor-a protein [Trametes versicolor FP-101664 SS1]
Length = 561
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 193/620 (31%), Positives = 323/620 (52%), Gaps = 70/620 (11%)
Query: 37 ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMET 96
+RYR ++SD +MLATQLN V+ Q+ K S+ + + C+ VQ +K++++L +
Sbjct: 2 DRYRVIVSDGEHFLQSMLATQLNHLVEEEQILKHSIAVIEKFTCNLVQGKKLLIILALRV 61
Query: 97 IILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNP 156
+ + E IGNP + G+ +Q
Sbjct: 62 VQKEAEKIGNPV---------------------------------GIQARAGGSIEAQ-- 86
Query: 157 GSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAP-ARIIPIAALN 215
++P++ AP A + +P P + P N I PI +L+
Sbjct: 87 ---ASPSAAVTPAPAA---------STKPAVSAAPAQSSRQPTQGNRGGRTAIYPIESLS 134
Query: 216 PYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIE 275
PYQ W IKARV +K ++R ++N RG+GK+F+ L+D + GEIR T FNA VD Y+ I+
Sbjct: 135 PYQNHWTIKARVISKSEIRTWSNQRGEGKLFNITLMD-ESGEIRATGFNATVDELYDRIQ 193
Query: 276 VGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
G+VY ISK + A+K F+++ NE+E+ LE + ++ C + D +P +F+F I+ ++
Sbjct: 194 EGKVYFISKAKVNLAKKKFSNIANEYELALERNTEIEECPDAAD-VPTVKFNFTPIANLQ 252
Query: 336 SAENNSIVDVIGIVISVNPSVPILRK-NGMETQRRILNLKDTSGRSVELTLWGDFCNKEG 394
+++ D++G+V V I K + ++ L + D SG SV++TLWG K+
Sbjct: 253 EIAKDAVCDIVGVVKEVGELSSITSKATSKQIPKKELTVVDASGFSVKVTLWG----KQA 308
Query: 395 QKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKN 454
++ E VD +PV++ K KV DF G+S+ + S+ L INPD EAH LR W+D+ G
Sbjct: 309 EQYNE-VD---YPVIAFKGAKVGDFQGRSLSMMSSSSLIINPDIPEAHHLRGWYDAAGAE 364
Query: 455 AATVSISREIAAGGA----KNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCY 510
S + +++GG + EI ++++ +K LG S+K D + RA I IK D+ Y
Sbjct: 365 QTYQSHTNTMSSGGGVSFDRAEI-RSLNDVKTSELGMSDKVDTFSSRATIMHIKGDNIAY 423
Query: 511 TACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQES 570
ACP + CNKKV G+ W+C+ C++ + ++RY++ + D +G W F +
Sbjct: 424 PACP----SQGCNKKVVLMGDSWRCENCDKSYPQPEHRYIVPMAVADYSGQAWFQGFNDV 479
Query: 571 GEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIR 630
G + G PA +L +K +DD F ++ + Y F + K++ Y D+ RV+ + R
Sbjct: 480 GLIVFGMPANDLVAIKE--RDDTEFNRVLEGTIGTTYNFACRAKQDNYNDQARVRYGISR 537
Query: 631 ADQVNYSSESRYLLDLISKS 650
++Y E+ YL +L+ +S
Sbjct: 538 ILPLDYREEATYLANLLRRS 557
>gi|170032512|ref|XP_001844125.1| replication protein A 70 kDa DNA-binding subunit [Culex
quinquefasciatus]
gi|167872595|gb|EDS35978.1| replication protein A 70 kDa DNA-binding subunit [Culex
quinquefasciatus]
Length = 615
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 212/660 (32%), Positives = 345/660 (52%), Gaps = 77/660 (11%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLI---GSTQERYRFLISDS-VSTQHAMLATQLND 60
L+ I+ I G K +VQ++ K I G ERYR LISD AMLATQLN+
Sbjct: 7 LSTGCIAEIMRGVEMEKSVVQILGSKRIAGSGEQAERYRLLISDGQYLYSFAMLATQLNE 66
Query: 61 RVKTGQVKKGSVVQLIDYICSTVQ-----NRKIIVVLNMETIILDCE---PIGNPKIFSE 112
+GQ+ + +V+++ +I S V ++++++L++ + IGNP+ +E
Sbjct: 67 MHHSGQLAEFTVIRIDRFITSVVNRNERGEKRVLIILDLTVVKPGSAVGVKIGNPQPLTE 126
Query: 113 SELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNA 172
+ S P R +++ G+ S +S R ++
Sbjct: 127 GGNPSGGAASSG---APTR---------------------TESAGAVSNGSSYQNRLNSS 162
Query: 173 GSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGD 232
S S Q ++Q P N +L+PYQ +W IKARV +K
Sbjct: 163 VSASNSTQSSLQESLTHPIN--------------------SLSPYQNKWVIKARVMSKSA 202
Query: 233 LRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQK 292
+R ++NA+G+GK+FS D++D + GEIRVT F D+FY++IE +VY I+K LKPA K
Sbjct: 203 IRTWSNAKGEGKLFSMDIMD-ESGEIRVTAFKEQCDKFYDMIEADKVYYITKCQLKPANK 261
Query: 293 NFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV 352
++ LKN++E+ + + + C + D S+P Q++F IS+I + E N+++DV+G+
Sbjct: 262 QYSTLKNDYEMTMSNETIIQECKDVDASMPGIQYNFVPISQITNMEPNAMIDVVGVCKEA 321
Query: 353 NP-SVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSV 411
+ + + +G E +R + + D+S +V+LTLWG + Q + PV+ V
Sbjct: 322 SELNTFTAKSSGRELTKREVTMVDSSNAAVQLTLWG----ADAQNFPTSTN----PVVVV 373
Query: 412 KSGKVNDF-SGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSIS-REIAAGGA 469
K +V +F GKS+G + + + +NPD AH++R W+D+GG +A S+S R AAGG+
Sbjct: 374 KGARVTEFGGGKSLGLVGGSVMKLNPDIDVAHKIRGWYDNGGCDAVINSVSTRTGAAGGS 433
Query: 470 KNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-Q 528
+ T + K + LG +KPD+ V+A + IKS + Y ACP CNKKV Q
Sbjct: 434 YSTEWMTFHETKEKNLGHGDKPDYFQVKALVHNIKSGNAVYKACP----QTDCNKKVVDQ 489
Query: 529 SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELY-MLKY 587
+++C++CN + YR L+ + D T WVT F E GE++LG ++E+ L+Y
Sbjct: 490 DNGQYRCEKCNADFPNFKYRLLVNMLVGDWTSNRWVTVFTELGEQMLGKTSQEIGDALEY 549
Query: 588 ELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
+D+ +I + F ++F+L+ K E YGD R K T + A VN+ + YL+ I
Sbjct: 550 N-KDEAE--QIFSNISFASFIFKLRTKVEFYGDAARNKTTAVAATPVNHKEYNAYLVKNI 606
>gi|347965864|ref|XP_321709.4| AGAP001421-PA [Anopheles gambiae str. PEST]
gi|333470320|gb|EAA01767.4| AGAP001421-PA [Anopheles gambiae str. PEST]
Length = 612
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 213/660 (32%), Positives = 346/660 (52%), Gaps = 79/660 (11%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLI---GSTQERYRFLISDSVST-QHAMLATQLND 60
LT ++ I G+ P+VQ++ K I G ER+R LISD S AMLATQLND
Sbjct: 6 LTVGFLAEIMQGNELQNPVVQILGSKRIAGNGEQSERFRLLISDGKSLYSFAMLATQLND 65
Query: 61 RVKTGQVKKGSVVQLIDYICSTVQ-----NRKIIVVLNMETI---ILDCEPIGNPKIFSE 112
K ++ + +++++ Y S V +++++++ + + L E IG+P+ ++
Sbjct: 66 LQKQDKLPQYTIIRIDRYTTSVVNRNEKGEKRVLIIVELTVLKEGSLVGEKIGDPQPMTD 125
Query: 113 SELTAQKTIPSNNLPQPVRVNNYSAP-NSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPN 171
+ PS QP + P ++G+ ++ N ++ S N
Sbjct: 126 T--------PS----QPATTQAPARPMDTGSSSMGNGASYGSAN---------------- 157
Query: 172 AGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKG 231
RS P Q + H PI++L+PYQ +W IKARV +K
Sbjct: 158 -----RSLSGGSAGPTQSIGDSLTH-------------PISSLSPYQNKWVIKARVMSKS 199
Query: 232 DLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQ 291
+R ++NA+G+GK+FS D++D + GEIR+T F DR+Y++IEV +VY ISK LKPA
Sbjct: 200 GIRTWSNAKGEGKLFSMDVMD-ESGEIRITAFKEQCDRYYDMIEVDKVYFISKCQLKPAN 258
Query: 292 KNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVIS 351
K + LKN++E+ + + V C + D S+P+ Q++F IS+I + E N++VDVIG+
Sbjct: 259 KQYTSLKNDYEMTMTNDTIVQECKDADGSMPEIQYNFVPISQIANMEPNAMVDVIGMCKD 318
Query: 352 VNPSVPILRK-NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLS 410
+ V K +G E ++R + L D+S SV+LTLWGD + Q PV+
Sbjct: 319 ASDVVQFTAKTSGRELRKREITLVDSSNASVQLTLWGD----DAQNFPATT----HPVVL 370
Query: 411 VKSGKVNDF-SGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGA 469
+K +V++F GKS+G I + + +NPD AH++R WF++GG A+ S+S
Sbjct: 371 LKGARVSEFGGGKSLGLIGGSVMKLNPDLEMAHKVRGWFENGGSEASVSSVSARTGGAAG 430
Query: 470 KNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-Q 528
+ + + K++ LG +KPD+ V+A I IKS + Y ACP CNKKV Q
Sbjct: 431 VSTEWLSFQEAKDKNLGAGDKPDYFQVKAMIHTIKSANAVYKACP----QADCNKKVIDQ 486
Query: 529 SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL-YMLKY 587
+++C++CN E YR L+ I D T WVT F E EE+LG ++E+ L+Y
Sbjct: 487 ENGQFRCEKCNAEFPNFKYRLLVNMLIGDWTSNRWVTVFTELAEEMLGKSSQEIGSSLEY 546
Query: 588 ELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
+ ++ + + S F ++F+L+ K E +G++ R K + + VN+ + L+ I
Sbjct: 547 QKEEAEK---LFTSISFKSFVFKLRTKVEYFGEQPRNKTSAVSVAPVNHKEYNALLIKSI 603
>gi|170087382|ref|XP_001874914.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650114|gb|EDR14355.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 602
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 203/672 (30%), Positives = 327/672 (48%), Gaps = 89/672 (13%)
Query: 1 MPVNLTPNSISLINGG-----DVNSKP-LVQVMDIKLIGSTQ------ERYRFLISDSVS 48
M LT S +N DV ++P VQ + IK + +T +RYR ++SD +
Sbjct: 1 MAFQLTAGSCERLNNATPSEEDVFNQPHTVQFLSIKKVNTTNASSSAVDRYRIIMSDGIH 60
Query: 49 TQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPK 108
AMLATQLN V+ + + +V + C+ VQ +++I++L++ + E IG PK
Sbjct: 61 FIQAMLATQLNSMVQDNTIGRHTVAVIEKLTCNYVQEKRLIIILSLRVLAHSAEKIGEPK 120
Query: 109 IFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFR 168
AP+ +P + TP + T
Sbjct: 121 -------------------------QMEAPH---------------DPAASVTPVTNTIE 140
Query: 169 APNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVT 228
+ + P +P + K+ P+ + PI L+PYQ W IKARVT
Sbjct: 141 -----TFAPPPPVPITKPSKPAEQVTS-----KDGGPS-VYPIEGLSPYQNSWTIKARVT 189
Query: 229 AKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLK 288
K +++ ++N RG+GK+F+ L+D + GEIR T FN VVD Y +E G+VY ISK +
Sbjct: 190 QKSEIKTWSNQRGEGKLFNVTLMD-ETGEIRATGFNLVVDELYPKLEEGKVYYISKARVN 248
Query: 289 PAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGI 348
A+K F++L N++E+ LE + V C E ++P ++SF +S ++ E +S+ DVIG+
Sbjct: 249 LAKKKFSNLANDYELSLERNTEVVEC-HETANVPMIKYSFVPLSGLQDLEKDSVCDVIGV 307
Query: 349 VISVNPSVPILRK-NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFP 407
V V+ I K + +R L L D SG SV LTLWG K E + P
Sbjct: 308 VKEVSALSEITSKATNRQIPKRELTLVDKSGFSVRLTLWG--------KQAEQYNAEDSP 359
Query: 408 VLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG 467
V++ K KV DF G+S+ S+ + +NP E LR W+DS G A S +AG
Sbjct: 360 VIAFKGVKVGDFGGRSLSMFSSSTMHVNPHLEECFALRGWYDSSG---AEQSFHAHSSAG 416
Query: 468 GAKNEIH------KTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQ 521
G + + +++ +K G G +KP++ + RA I IK+D+ Y ACP +
Sbjct: 417 GGASTMSFNRAEIRSLDDVKQAGFGLPDKPEYFSARATIMHIKADNISYPACPT----QN 472
Query: 522 CNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKE 581
CNKKV Q G+ W+C++C + + ++RY++ + D +G W F E G I G A E
Sbjct: 473 CNKKVIQDGDSWRCEKCEKSFEAPEHRYIMSLAVADASGQAWFQGFNEVGTTIFGKTANE 532
Query: 582 LYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESR 641
L ++ + ++ ++ N Y F + K++ Y + R++ + R ++Y E+
Sbjct: 533 LIAIRD--SNSAQYNVLLHKANCNTYNFSCRAKQDTYNENTRIRYGISRIYPLDYKEEAM 590
Query: 642 YLLDLISKSFRK 653
L DL+ S+ +
Sbjct: 591 ALRDLLYSSWAR 602
>gi|356511809|ref|XP_003524615.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Glycine max]
Length = 620
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 199/638 (31%), Positives = 349/638 (54%), Gaps = 61/638 (9%)
Query: 23 LVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICST 82
+VQV+D+K G+ +Y F +D + AM+ + + +V +G ++ +++++DY +
Sbjct: 30 VVQVLDLKATGN---KYMFTANDGKTKLKAMIPSDMRSQVLSGAIQNLGLIRVLDYTVND 86
Query: 83 VQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGT 142
+ N+ +L ++ CE + +P + E E+ ++++ S L +P
Sbjct: 87 IPNKSDKYLLAIK-----CEAV-SPAL--EMEIKSEES-GSGILLKP------------- 124
Query: 143 FNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKN 202
+ G ++ + G P + +S ++ + N P +
Sbjct: 125 ---KVEGGVKTEGAAA------GILLKPKQEVVTKSANQILREQHG------NSAPAARM 169
Query: 203 EAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTC 262
R+ P+ +LNPYQG W IK VT+KG++R Y NARGDG VF+ +L D DG +I+ T
Sbjct: 170 AMTRRVRPLVSLNPYQGNWTIKVSVTSKGNMRTYKNARGDGCVFNVELTDEDGTQIQATM 229
Query: 263 FNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIP 322
FN +F++ +G+VY IS+G+LK A K F ++N++E+ L S V+ E +P
Sbjct: 230 FNNAARKFFDKFVLGKVYYISRGTLKVANKQFKTVQNDYEMTLNENSEVEEVVGEASFVP 289
Query: 323 KQQFSFRHISEIESAENNS-IVDVIGIVISVNPSVPILRKNGMET-QRRILNLKDTSGRS 380
+ +F+F I ++ N S +VDVIG+V +V+ ++ I RK+ E+ +R + + D + ++
Sbjct: 290 ETKFNFVQIDQLGPHVNKSELVDVIGVVKNVSSTMSIRRKSDNESIPKRDITIADDTKKT 349
Query: 381 VELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAE 440
V ++LW + G++L ++VD PV+++KS KV DF G S+ TI + + +NPD E
Sbjct: 350 VVVSLWNELATTTGEELLDIVDKS--PVVAIKSLKVGDFQGVSLSTIGRSVVLVNPDIPE 407
Query: 441 AHELREWFDSGGKNAATVSI---SREIAAGGAK----NEIHKTVSQIKNEGLGRSEKPDW 493
A LR W+D GK+AA S+ S I+ G + + IH + I N LG KP +
Sbjct: 408 AKNLRSWYDFEGKDAAMDSVGSGSSPISNNGIRSVYTDRIHLS-DIISNPSLGDG-KPAF 465
Query: 494 VTVRAFITFIKSD-SFCYTACPLMIGDRQCNKKVTQS-GNRWQCDRCNQEIDECDYRYLL 551
++R ITFIK D + Y AC + CNKKVT+S G+ + CD C + ++C RY++
Sbjct: 466 FSLRGHITFIKPDQAMWYRAC------KTCNKKVTESFGSGYWCDGCQKSDEQCSLRYIM 519
Query: 552 QAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRL 611
A++ D + T+++ F + E+I+GC A +L LK + +D + ++ + Q+LFR+
Sbjct: 520 VAKVSDGSAETFISVFNQEAEKIVGCSADDLDNLKLQEGEDNPYQMTLKEATWAQHLFRV 579
Query: 612 KIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+ Y E+R +ITV V++++ESR++L+ +SK
Sbjct: 580 SVTPNEYNGEKRQRITVRAVVPVDFAAESRFILEELSK 617
>gi|119188411|ref|XP_001244812.1| replication factor-A protein 1 [Coccidioides immitis RS]
Length = 605
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 205/660 (31%), Positives = 336/660 (50%), Gaps = 79/660 (11%)
Query: 1 MPVNLTPNSISLI--NGGDVNSKPLVQVMDIKLIGSTQ---ERYRFLISDSVSTQHAMLA 55
M N+T ++S I + + +KP+VQ + +KL+ S +RYR + SD + MLA
Sbjct: 1 MANNITVGALSAIFDDTKEKVAKPIVQCLHVKLLSSPSGGPDRYRAVFSDISNFVQTMLA 60
Query: 56 TQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSES 113
+ LND V G +++G VQL + + V+ ++I++VL+++ + + +CE IG+PK
Sbjct: 61 SSLNDLVNNGALRRGCFVQLKSFQANFVKGKRILIVLDLDVLEDLGECERIGDPKPLETK 120
Query: 114 ELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
+K P+ + + G + + S + P
Sbjct: 121 VAEVEKPTPTA--------------------ISSDGFYGVVSEHSVAQPQRHQ------- 153
Query: 174 SIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDL 233
R+ PT+ P + A I PI AL+PY +W IKAR T K +
Sbjct: 154 ---RATVPTMAPTH------------------ANIYPIEALSPYSHKWTIKARCTNKSAI 192
Query: 234 RRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQK 292
+++ N G+G++FS +LLD D GEIR T F D Y + E G VY IS ++ A++
Sbjct: 193 KKWYNRNGEGRLFSVNLLD-DSGEIRATAFKEQCDLLYPLFEEGSVYYISSPCRVQMAKR 251
Query: 293 NFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV 352
F+++ N++E+ E + ++ + +D +P+ +F+F I + S E + +DV+G++ +V
Sbjct: 252 EFSNVNNDYELTFERDTVIERAEDHED-VPQMRFNFTSIGHLHSVEKGTTIDVLGVLKTV 310
Query: 353 NPSVPILRKN-GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSV 411
P + K+ G +R L L D +G SV LT+WG DV V++
Sbjct: 311 EPVAEVPSKSTGKRYTKRELMLVDDTGYSVPLTIWGGMATS--------FDVMPDSVVAF 362
Query: 412 KSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGK--NAATVSISREIA-AGG 468
K KV+DF G+S+ + S + +PD EAH+L+ W+D+ GK AT ++S A + G
Sbjct: 363 KGVKVSDFGGRSLSLLNSGTITSDPDIEEAHKLKGWYDAQGKFDQFATHALSENAAISTG 422
Query: 469 AKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ 528
+ +I+K + ++++ LG +EKPD+ ++RA + FIK D+ CY AC +CNKKV Q
Sbjct: 423 TRQDIYKAIVEVRDNQLGMTEKPDYFSLRATVVFIKQDTICYPACV----QERCNKKVVQ 478
Query: 529 -SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKY 587
+W C+ C + +YRY+L A + D TG W+ F E G I+G PA L LK
Sbjct: 479 VDPEQWLCEHCEKSSLRPEYRYILSANVSDHTGQLWLNCFDEVGRAIMGMPANVLMELKE 538
Query: 588 ELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
DD E I ++ LK K +L + + + V+ A +N+S ES L+ LI
Sbjct: 539 --SDDKAASEAILHATCQ--MWNLKCKAKLDNFQNQPRYQVLGASPINFSHESSRLVSLI 594
>gi|398396686|ref|XP_003851801.1| hypothetical protein MYCGRDRAFT_109907 [Zymoseptoria tritici
IPO323]
gi|339471681|gb|EGP86777.1| hypothetical protein MYCGRDRAFT_109907 [Zymoseptoria tritici
IPO323]
Length = 646
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 202/656 (30%), Positives = 346/656 (52%), Gaps = 65/656 (9%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLIGSTQ----ERYRFLISDSVSTQHAMLATQLND 60
L+ + + G + P+VQ + IK + + Q ER+R + +DS++ MLATQ N+
Sbjct: 34 LSAGVLREVTEGQTHENPIVQCVQIKPMSANQATGQERWRVVFNDSINFIQGMLATQSNN 93
Query: 61 RVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKT 120
+ G +K+GS+ +L + + V+++ I++V+++E + K + E E Q
Sbjct: 94 LINDGTLKRGSICRLTQFTANFVKDKHILIVVDLEVL----------KEYGEPEKIGQPV 143
Query: 121 IPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQ 180
+ + +P + + P G N+ +G F P S NS P A
Sbjct: 144 AITYDGAKPEQQEDVK-PQPG--NIAGNG-FYGNKPQQQS--NSELSARPKA-------- 189
Query: 181 PTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAR 240
+ + I PI A++PY +W IKAR T KGD++ ++N
Sbjct: 190 ------------------TVSHNGRGNITPIEAVSPYTHKWTIKARCTHKGDIKTWHNKN 231
Query: 241 GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKN 299
G+GK+FS + LD D GEIR T FN VD++YE + G VY IS ++ A+K F+++ N
Sbjct: 232 GEGKLFSVNFLD-DSGEIRATGFNDSVDQWYEFLTEGNVYYISSPCKVQLAKKQFSNVNN 290
Query: 300 EWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPIL 359
++E+ E +TV+ E+ D +P+ +++F I+ +++ + ++ +D IG++ V I+
Sbjct: 291 DYELTFERDTTVEK-AEDHDGVPQVRYNFTDIAALQNVDKDTTIDCIGVLQEVGEVNEIV 349
Query: 360 RKNGME-TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVND 418
K+ + +R L L D SG +V LT+WG K E D V++ K KV+D
Sbjct: 350 SKSTNKPYSKRELTLVDNSGYNVRLTVWG--------KTAESFDARPESVVAFKGVKVSD 401
Query: 419 FSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKN----EIH 474
F G+S+ + S + I+PD EA++L+ W+D G+N S + +AA GA +
Sbjct: 402 FGGRSLSLLSSGSMNIDPDIDEAYKLKGWYDGEGRNGNFASHANSMAAAGATSGGRPSDF 461
Query: 475 KTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSG-NRW 533
KT++Q+ ++ G+SE DW +++A I ++K DSF Y AC + CNKKVT+ +W
Sbjct: 462 KTIAQVYDDKDGQSETTDWFSIKATIVYVKQDSFAYPAC-RTTDPKPCNKKVTEHDEGQW 520
Query: 534 QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDV 593
+C++C D +YRY++ + D TG W++ F E G +++G A +L LK E DD
Sbjct: 521 RCEQCQMTWDRPNYRYIMSVNVSDHTGQIWLSCFDEVGVQVMGMSANDLMALKEE-GDDK 579
Query: 594 RFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
R GE ++F+ K K + + D+QRV+ V + ++Y+ E++ L D+I +
Sbjct: 580 RVGEAFSDANCKSFIFKCKAKMDTFQDQQRVRYQVQYVNPIDYAREAKKLADIIKQ 635
>gi|195649695|gb|ACG44315.1| replication protein A 70 kDa DNA-binding subunit [Zea mays]
Length = 618
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 176/464 (37%), Positives = 273/464 (58%), Gaps = 19/464 (4%)
Query: 195 NHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSD 254
N P+ R+ P+ LNPYQG W IK RVT+KG+LR Y NARG+G VF+ +L D D
Sbjct: 161 NTAPVKPLSMTKRVHPLITLNPYQGNWVIKVRVTSKGNLRTYRNARGEGCVFNVELTDED 220
Query: 255 GGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLC 314
G +I+ T FN +FY I E+G VY +SKGSL+ A K F ++N++E+ L + V+
Sbjct: 221 GTQIQATMFNDAAKKFYPIFELGNVYYVSKGSLRIANKQFKTVQNDYEMSLNENAIVEE- 279
Query: 315 TEEDDSIPKQQFSFRHISEIES-AENNSIVDVIGIVISVNPSVPILRKNGMET-QRRILN 372
E + IP+ Q++ I ++ S +VD++G+V SV+P++ + RK ET +R +
Sbjct: 280 AEGETCIPQVQYNLVKIDQLGSYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIV 339
Query: 373 LKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQL 432
+ D SG++V ++LW D GQ+L +M D PV+++KS KV+DF G S+ T+ + L
Sbjct: 340 VADDSGKTVSISLWNDLATTTGQELLDMADSS--PVVAIKSLKVSDFQGVSLSTVGKSTL 397
Query: 433 FINPDFAEAHELREWFDSGGKNAATVSISREIA---AGGAKNEIHKTV--SQIKNEGLGR 487
INPD EA L+ W+DS GK+ + I E+ AGG K+ V S I ++
Sbjct: 398 AINPDLHEAQNLKSWYDSEGKDTSLAPIGAEMGAARAGGFKSTYSDRVFLSHITSDPAMG 457
Query: 488 SEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKKVTQS-GNRWQCDRCNQEIDEC 545
EKP + ++ A I+ IK D + Y AC + CNKKVT++ G+ + C+ C + EC
Sbjct: 458 QEKPVFFSLYATISHIKPDQNMWYRAC------KTCNKKVTETFGSGYWCEGCQKNDSEC 511
Query: 546 DYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFN 605
RY++ ++ D TG WV+ F E E+I+GC A EL ++ E DD + ++ +
Sbjct: 512 SLRYIMVVKVSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDD-SYALKLKEATWV 570
Query: 606 QYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+LFR+ + + Y +E+R +ITV V +++ES+YLL+ I+K
Sbjct: 571 PHLFRVSVTQHEYNNEKRQRITVRSEAPVEHAAESKYLLEQIAK 614
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 23 LVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICST 82
+VQV+D+K +G T R+ F +D AML T V++G +K ++++IDY C+
Sbjct: 31 VVQVLDLKSVG-TGSRFSFTATDGKDKIKAMLPTNFGSEVRSGNLKNLGLIRIIDYTCNV 89
Query: 83 VQNR--KIIVVLNMETII--LDCEPIGNPK 108
V+ + K++VV+ E + LD E G K
Sbjct: 90 VKGKDDKVLVVIKCELVCQALDAEINGEAK 119
>gi|406860812|gb|EKD13869.1| replication factor-a protein 1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 611
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 202/639 (31%), Positives = 335/639 (52%), Gaps = 77/639 (12%)
Query: 22 PLVQVMDIKLIGSTQE----RYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLID 77
P+ Q + IK + S+ E RYR ++SD + +MLATQ N V G++KKGS+V+L
Sbjct: 31 PVCQCVQIKTLASSGEGAADRYRLVLSDVDNFVQSMLATQANHVVHEGKLKKGSIVRLKQ 90
Query: 78 YICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNY 135
Y + V+ ++I+++L++E I + + E IG+P + E K P+N
Sbjct: 91 YQANAVKGKRILIILDLEVIESLGEMEKIGDPVALTVKEEPDVK--PANT---------- 138
Query: 136 SAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRN 195
+ +G + +Q P A + ++ Q P P + +
Sbjct: 139 --------TIAGNGFYGNQ---------------PKASAPIK--QERALPSRTGPSSSAS 173
Query: 196 HGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDG 255
H A I PI L+PY +W IKARVT K D++ ++ +GK+FS +LLD +
Sbjct: 174 H---------ATIYPIEGLSPYAHKWTIKARVTQKSDIKTWHKPSSEGKLFSVNLLD-ET 223
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATSTVDLC 314
GEI+ T FN D+ YE+ + G VY IS ++ A+K F++L N++E+ E + V+
Sbjct: 224 GEIKATGFNDQCDQLYELFQEGAVYYISSPCKVQLAKKQFSNLSNDYELTFERDTVVEKA 283
Query: 315 TEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMET-QRRILNL 373
++ D +P+ +++F I E+++ E +S++D+IG++ V I+ K + +R L L
Sbjct: 284 EDQAD-VPQIRYNFTGIGELQNIEKDSMIDIIGVLKEVADVNQIVSKTTQKPFDKRELTL 342
Query: 374 KDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFP--VLSVKSGKVNDFSGKSIGTIPSTQ 431
D S SV LT+WG + V P +++ K KV+DF G+S+ + S
Sbjct: 343 VDESDFSVRLTIWG----------KSAVSFDAIPESIIAFKGAKVSDFGGRSLSLLSSGT 392
Query: 432 LFINPDFAEAHELREWFDSGGKNAATVSISREIAAG--GAKNEIHKTVSQIKNEGLGRSE 489
+ INPD +EAH+LR W+DS G+ S AG G +++ KT++Q++ E LG SE
Sbjct: 393 MAINPDISEAHKLRGWYDSQGRMNTFQSHQNMSGAGAAGGRSDPLKTIAQVREENLGMSE 452
Query: 490 KPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYR 548
+PD+ +V+A I +IK D+F Y AC + CNKKV G+ WQC++CN + +YR
Sbjct: 453 QPDYFSVKATIVYIKQDNFAYPACL----NDGCNKKVIDMGDGSWQCEKCNVSHPKPEYR 508
Query: 549 YLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYL 608
Y++ + D TG W+ F + G ++G +L L+ D + + Y+
Sbjct: 509 YIMSLNVNDYTGQLWLNCFDDVGRLVMGHSGDQLMELRE--NDTAAMEKAFETSNCTTYI 566
Query: 609 FRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
F+ + K + + D+ RV+ V+ A VN+ E++ L DLI
Sbjct: 567 FKCRAKMDNFQDQTRVRYQVMNASPVNFVQEAKKLADLI 605
>gi|452840129|gb|EME42067.1| hypothetical protein DOTSEDRAFT_72982 [Dothistroma septosporum
NZE10]
Length = 621
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 200/658 (30%), Positives = 352/658 (53%), Gaps = 69/658 (10%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLIGST---QERYRFLISDSVSTQHAMLATQLNDR 61
++ ++ I G+ +P+ Q + IK + QER+R + +D+V+ M+A Q N
Sbjct: 8 ISQGALRRITEGEQVEQPVFQCVQIKPMAQANGGQERWRVVFNDTVNFIQGMIAIQSNHL 67
Query: 62 VKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQK 119
+ G++KKGS+ +L Y + V+++ I++++++E + + + +G P ++ AQ+
Sbjct: 68 INDGKLKKGSICRLNSYQANYVKDKYILIIIDLEVLEDYGEQDKLGQPVALDNAKPEAQE 127
Query: 120 TIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSF 179
+ PQP + +G N + + P+
Sbjct: 128 DVK----PQPGNI-------AGNNFYGNKPQQQAPQQQQRALPSR--------------- 161
Query: 180 QPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNA 239
N +HG A I PI A++PY +W IKAR T+KGD++ ++N
Sbjct: 162 -----------TNGASHG------GHANITPIEAISPYTHKWTIKARCTSKGDIKTWHNK 204
Query: 240 RGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLK 298
G+GK+FS + LD D GEIR+T FN VD++Y+ ++ G VY IS ++PA+K F++L
Sbjct: 205 NGEGKLFSANFLD-DSGEIRMTGFNDAVDQWYDTLQEGSVYYISSPCRVQPAKKQFSNLN 263
Query: 299 NEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI 358
N++E+ E + ++ E++D +P+ +++F I+ ++ E +S +DVIG++ V+ I
Sbjct: 264 NDYELTAEKDTQIEKA-EDNDGVPQVRYNFTTIAALQEIEKDSTIDVIGVLQDVSEVSEI 322
Query: 359 LRKNGME-TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVN 417
+ K + +R L L D +G +V LT+WG K E +D+ V++ K KV+
Sbjct: 323 VSKTTSKPYSKRELTLVDNTGYNVRLTVWG--------KTAETLDIQPESVVAFKGVKVS 374
Query: 418 DFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGA----KNEI 473
DF G+S+ + S + NPD EA++L+ W+D G+ S + +A GA K
Sbjct: 375 DFGGRSLSLLSSGSMSANPDIEEAYKLKGWYDGAGRTENFASHANTMATVGATSGGKGND 434
Query: 474 HKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQS--GN 531
KT++Q+++EGLG ++ DW +++A I ++K D+F Y AC + CNKKV ++ GN
Sbjct: 435 TKTIAQVRDEGLGMTDDTDWFSIKATIIYVKQDNFAYPAC-RTTDPQPCNKKVIENEPGN 493
Query: 532 RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQD 591
W+C++C++ D YRY++ + D TG W++ F E GE I+G PA +L +K E D
Sbjct: 494 -WRCEKCDKSWDAPKYRYIMSVNVSDHTGQIWLSCFDEVGERIMGMPANDLMAMKEE-GD 551
Query: 592 DVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
D R + + FR+K K + + D+QRV+ V A+ +++S E+ L +I +
Sbjct: 552 DKRVTDAFGDANCQTFNFRVKAKMDNFQDQQRVRYQVQYANPLDFSREATKLAQIIKQ 609
>gi|226503005|ref|NP_001147118.1| replication protein A1 [Zea mays]
gi|195607412|gb|ACG25536.1| replication protein A 70 kDa DNA-binding subunit [Zea mays]
Length = 618
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/464 (38%), Positives = 274/464 (59%), Gaps = 19/464 (4%)
Query: 195 NHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSD 254
N P+ R+ P+ LNPYQG W IK RVT+KG+LR Y NARG+G VF+ +L D D
Sbjct: 161 NTAPVKPLSMTKRVHPLITLNPYQGNWVIKVRVTSKGNLRTYRNARGEGCVFNVELTDED 220
Query: 255 GGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLC 314
G +I+ T FN +FY I E+G+VY +SKGSL+ A K F ++N++E+ L + V+
Sbjct: 221 GTQIQATMFNDAAKKFYPIFELGKVYYVSKGSLRIANKQFKTVQNDYEMSLNENAIVEE- 279
Query: 315 TEEDDSIPKQQFSFRHISEIES-AENNSIVDVIGIVISVNPSVPILRKNGMET-QRRILN 372
E + IP+ Q++ I ++ S +VD+IG+V SV+P++ + RK ET +R +
Sbjct: 280 AEGETCIPQVQYNLVKIDQLGSYVGGRELVDIIGVVQSVSPTLSVRRKIDNETIPKRDIV 339
Query: 373 LKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQL 432
+ D SG++V ++LW D GQ+L +M D PV+++KS KV+DF G S+ T+ + L
Sbjct: 340 VADDSGKTVSISLWNDLTTTTGQELLDMADSS--PVVAIKSLKVSDFQGVSLSTVGKSTL 397
Query: 433 FINPDFAEAHELREWFDSGGKNAATVSISREIA---AGGAKNEIHKTV--SQIKNEGLGR 487
INPD EA L+ W+DS GK+ + I E+ AGG K+ V S I ++
Sbjct: 398 AINPDLHEAQNLKSWYDSEGKDTSLAPIGAEMGAARAGGFKSTYSDRVFLSHITSDPAMG 457
Query: 488 SEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKKVTQS-GNRWQCDRCNQEIDEC 545
EKP + ++ A I+ IK D + Y AC + CNKKVT++ G+ + C+ C + EC
Sbjct: 458 QEKPVFFSLYATISHIKPDQNMWYRAC------KTCNKKVTETFGSGYWCEGCQKNDSEC 511
Query: 546 DYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFN 605
RY++ ++ D TG WV+ F E E+I+GC A EL ++ E DD + ++ +
Sbjct: 512 SLRYIMVIKVSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDD-SYVLKLKEATWV 570
Query: 606 QYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+LFR+ + + Y +E+R +ITV V +++ES+YLL+ I+K
Sbjct: 571 PHLFRVSVTQHEYNNEKRQRITVRSEAPVEHAAESKYLLEQIAK 614
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 23 LVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICST 82
+VQV+D+K +G T R+ F +D AML T V++G +K ++++IDY C+
Sbjct: 31 VVQVLDLKSVG-TGSRFSFTATDGKDKIKAMLPTNFGSEVRSGNLKNLGLIRIIDYTCNV 89
Query: 83 VQNR--KIIVVLNMETII--LDCEPIGNPK 108
V+ + K++VV+ E + LD E G K
Sbjct: 90 VKGKDDKVLVVIKCELVCQALDAEINGEAK 119
>gi|303316318|ref|XP_003068161.1| replication factor-A protein 1 family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240107842|gb|EER26016.1| replication factor-A protein 1 family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 605
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 204/660 (30%), Positives = 337/660 (51%), Gaps = 79/660 (11%)
Query: 1 MPVNLTPNSISLI--NGGDVNSKPLVQVMDIKLIGSTQ---ERYRFLISDSVSTQHAMLA 55
M N+T ++S I + + +KP+VQ + +KL+ S +RYR + SD + MLA
Sbjct: 1 MANNITVGALSAIFDDTKEKVAKPIVQCLHVKLLSSPSGGPDRYRAVFSDISNFVQTMLA 60
Query: 56 TQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSES 113
+ LN+ V G +++G VQL + + V+ ++I++VL+++ + + +CE IG+PK
Sbjct: 61 SSLNNLVNNGALRRGCFVQLKSFQANFVKGKRILIVLDLDVLEDLGECERIGDPKPLETK 120
Query: 114 ELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
+K P+ + + G + + S + P
Sbjct: 121 VAEVEKPTPTA--------------------ISSDGFYGVVSEHSAAQPQRHQ------- 153
Query: 174 SIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDL 233
R+ PT+ P + A I PI AL+PY +W IKAR T K +
Sbjct: 154 ---RASVPTMAPTH------------------ANIYPIEALSPYSHKWTIKARCTNKSAI 192
Query: 234 RRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQK 292
+++ N G+G++FS +LLD D GEIR T F D Y + E G VY IS ++ A++
Sbjct: 193 KKWYNRNGEGRLFSVNLLD-DSGEIRATAFKEQCDLLYPLFEEGSVYYISSPCRVQMAKR 251
Query: 293 NFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV 352
F+++ N++E+ E + ++ + +D +P+ +F+F I + S E + +DV+G++ +V
Sbjct: 252 EFSNVNNDYELTFERDTVIEKAEDHED-VPQMRFNFTSIGHLHSVEKGTTIDVLGVLKTV 310
Query: 353 NPSVPILRKN-GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSV 411
P + K+ G +R L L D +G SV LT+WG + DV V++
Sbjct: 311 EPVAEVPSKSTGKRYTKRELMLVDDTGYSVPLTIWG--------AMATSFDVMPDSVVAF 362
Query: 412 KSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGK--NAATVSISREIA-AGG 468
K KV+DF G+S+ + S + +PD EAH+L+ W+D+ GK AT ++S A + G
Sbjct: 363 KGVKVSDFGGRSLSLLNSGTITSDPDIEEAHKLKGWYDAQGKFDQFATHALSENAAISTG 422
Query: 469 AKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ 528
+ +I+K + ++++ LG +EKPD+ ++RA + FIK D+ CY AC +CNKKV Q
Sbjct: 423 TRQDIYKAIVEVRDNQLGMTEKPDYFSLRATVVFIKQDTICYPACV----QERCNKKVVQ 478
Query: 529 -SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKY 587
+W C+ C + +YRY+L A + D TG W+ F E G I+G PA L LK
Sbjct: 479 VDSEQWLCEHCEKSSLRPEYRYILSANVSDHTGQLWLNCFDEVGRAIMGMPANVLMELKE 538
Query: 588 ELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
DD E I ++ LK K +L + + + V+ A +N+S ES L+ LI
Sbjct: 539 --SDDKAASEAILHATCQ--MWNLKCKAKLDNFQNQPRYQVLGASPINFSHESSRLVSLI 594
>gi|320037894|gb|EFW19830.1| replication factor-A protein 1 [Coccidioides posadasii str.
Silveira]
Length = 605
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 204/660 (30%), Positives = 337/660 (51%), Gaps = 79/660 (11%)
Query: 1 MPVNLTPNSISLI--NGGDVNSKPLVQVMDIKLIGSTQ---ERYRFLISDSVSTQHAMLA 55
M N+T ++S I + + +KP+VQ + +KL+ S +RYR + SD + MLA
Sbjct: 1 MANNITVGALSAIFDDTKEKVAKPIVQCLHVKLLSSPSGGPDRYRAVFSDISNFVQTMLA 60
Query: 56 TQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSES 113
+ LN+ V G +++G VQL + + V+ ++I++VL+++ + + +CE IG+PK
Sbjct: 61 SSLNNLVNNGALRRGCFVQLKSFQANFVKGKRILIVLDLDVLEDLGECERIGDPKPLETK 120
Query: 114 ELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
+K P+ + + G + + S + P
Sbjct: 121 VAEVEKPTPTA--------------------ISSDGFYGVVSEHSAAQPQRHQ------- 153
Query: 174 SIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDL 233
R+ PT+ P + A I PI AL+PY +W IKAR T K +
Sbjct: 154 ---RASVPTMAPTH------------------ANIYPIEALSPYSHKWTIKARCTNKSAI 192
Query: 234 RRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQK 292
+++ N G+G++FS +LLD D GEIR T F D Y + E G VY IS ++ A++
Sbjct: 193 KKWYNRNGEGRLFSVNLLD-DSGEIRATAFKEQCDLLYPLFEEGSVYYISSPCRVQMAKR 251
Query: 293 NFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV 352
F+++ N++E+ E + ++ + +D +P+ +F+F I + S E + +DV+G++ +V
Sbjct: 252 EFSNVNNDYELTFERDTVIEKAEDHED-VPQMRFNFTSIGHLHSVEKGTTIDVLGVLKTV 310
Query: 353 NPSVPILRKN-GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSV 411
P + K+ G +R L L D +G SV LT+WG + DV V++
Sbjct: 311 EPVAEVPSKSTGKRYTKRELMLVDDTGYSVPLTIWG--------AMATSFDVMPDSVVAF 362
Query: 412 KSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGK--NAATVSISREIA-AGG 468
K KV+DF G+S+ + S + +PD EAH+L+ W+D+ GK AT ++S A + G
Sbjct: 363 KGVKVSDFGGRSLSLLNSGTITSDPDIEEAHKLKGWYDAQGKFDQFATHALSENAAISTG 422
Query: 469 AKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ 528
+ +I+K + ++++ LG +EKPD+ ++RA + FIK D+ CY AC +CNKKV Q
Sbjct: 423 TRQDIYKAIVEVRDNQLGMTEKPDYFSLRATVVFIKQDTICYPACV----QERCNKKVVQ 478
Query: 529 -SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKY 587
+W C+ C + +YRY+L A + D TG W+ F E G I+G PA L LK
Sbjct: 479 VDSEQWLCEHCEKSSLRPEYRYILSANVSDHTGQLWLNCFDEVGRAIMGMPANVLMELKE 538
Query: 588 ELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
DD E I ++ LK K +L + + + V+ A +N+S ES L+ LI
Sbjct: 539 --SDDKAASEAILHATCQ--MWNLKCKAKLDNFQNQPRYQVLGASPINFSHESSRLVSLI 594
>gi|383854350|ref|XP_003702684.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Megachile rotundata]
Length = 591
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 216/649 (33%), Positives = 331/649 (51%), Gaps = 91/649 (14%)
Query: 12 LINGGDVNSKPLVQVMDIKLIGSTQ--ERYRFLISDSVS-TQHAMLATQLNDRVKTGQVK 68
++NG DV KP++Q++ K + S+ ERYR L+SD MLATQLN + +
Sbjct: 12 IMNGIDV-EKPILQILGHKKLASSSSGERYRLLVSDGKRINSFTMLATQLNSMITDNILT 70
Query: 69 KGSVVQLIDYICSTVQN----RKIIVVLNMETIILDCE---PIGNPKIFSESELTAQKTI 121
+ S+ Q+ Y S V N ++++V+LN++ + E IGNP +ESE +
Sbjct: 71 EFSICQINRYAISMVHNAGKQKRVMVILNIDVKVRGNEVGHKIGNP-TNAESE---SDST 126
Query: 122 PSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQP 181
P+ + P P + N P QN ST + T
Sbjct: 127 PA-SAPAPPQQRNVLMP--------------KQNTHQSSTSDIST--------------- 156
Query: 182 TVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARG 241
PI+ AL+PYQ RW IKARV +K D+R ++N+RG
Sbjct: 157 ---------------TPIV------------ALSPYQNRWVIKARVLSKSDIRTWSNSRG 189
Query: 242 DGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEW 301
+GK+FS DL+D + GEIR T F D+FY+++EVG+VY IS+ +LK A K FNHLKN++
Sbjct: 190 EGKLFSMDLVD-ESGEIRCTAFRDQCDKFYDMLEVGKVYYISRATLKTANKQFNHLKNDY 248
Query: 302 EIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVIS-VNPSVPILR 360
E+ L + + C + + IP QF+F+ IS++E+ E N +DVI IV S + + R
Sbjct: 249 EMTLTGDTEIIPCHDGGNEIPTLQFNFQPISDVETKEKNEYIDVIAIVKSCADLQLLTSR 308
Query: 361 KNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFS 420
G E ++R + L D S V TLWG K E D PV++VK +V +F+
Sbjct: 309 NTGREMKKRDIFLVDQSSTMVCFTLWG--------KEAEEFDGSNNPVIAVKGARVGEFN 360
Query: 421 -GKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQ 479
GK++ ++ ST + INPD EAH L WF++ G N SISR GG + T +
Sbjct: 361 GGKNLSSLSSTVIQINPDIPEAHRLHGWFNATGHNEEAKSISRTFGGGGNISGPWLTFKE 420
Query: 480 IKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKK-VTQSGNRWQCDRC 538
+ LG + P+ V+A I I+ ++ Y +CP C KK + Q+ + ++C++C
Sbjct: 421 AREMELG-FKGPEMYMVKATINMIRIENAVYKSCP----SESCKKKLIDQANDMYRCEKC 475
Query: 539 NQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEI 598
++E YR L + D T W TAF E E+ILG A+EL L+ D+ + E
Sbjct: 476 DKEYPNYRYRLLASLSLADWTDNQWATAFSEEAEKILGITAQELGELQE--NDNDAYLEK 533
Query: 599 IRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
F +LF++++K E + DE R+K T + + ++Y + +L+ I
Sbjct: 534 FADATFKSFLFKIRVKLETFSDENRLKATCVAVNPLDYKLYNNHLITQI 582
>gi|428698228|pdb|4GOP|C Chain C, Structure And Conformational Change Of A Replication
Protein A Heterotrimer Bound To Ssdna
gi|428698231|pdb|4GOP|Z Chain Z, Structure And Conformational Change Of A Replication
Protein A Heterotrimer Bound To Ssdna
gi|451928925|pdb|4GNX|C Chain C, Structure Of
gi|451928928|pdb|4GNX|Z Chain Z, Structure Of
Length = 444
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 173/450 (38%), Positives = 254/450 (56%), Gaps = 22/450 (4%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I PI L+PYQ RW IKARVT+K D+R ++N RG+GK+FS +LLD D GEI+ T FN V
Sbjct: 3 IYPIEGLSPYQNRWTIKARVTSKSDIRHWSNQRGEGKLFSVNLLD-DSGEIKATGFNDAV 61
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
DRFY +++ VYLISK + A+K F++L+NE+EI E ++ ++ CT+ D +P+ ++
Sbjct: 62 DRFYPLLQENHVYLISKARVNIAKKQFSNLQNEYEITFENSTEIEECTDATD-VPEVKYE 120
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILNLKDTSGRSVELTLW 386
F I+E+ES E N DVIGI+ S I+ K Q+R L L D RSV+LTLW
Sbjct: 121 FVRINELESVEANQQCDVIGILDSYGELSEIVSKASQRPVQKRELTLVDQGNRSVKLTLW 180
Query: 387 GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELRE 446
G K + V PVL+ K KV DF G+S+ S+ + INPD E+H LR
Sbjct: 181 G----KTAETFPTNAGVDEKPVLAFKGVKVGDFGGRSLSMFSSSTMLINPDITESHVLRG 236
Query: 447 WFDSGGKNA--------ATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRA 498
W+D+ G +A + GA +T+ Q+K+E LG SEKPD+ VRA
Sbjct: 237 WYDNDGAHAQFQPYTNGGVGGGAMGGGGAGANMAERRTIVQVKDENLGMSEKPDYFNVRA 296
Query: 499 FITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQD 557
+ +IK ++ YTAC CNKKV N W+C++C++ +YRY+L + D
Sbjct: 297 TVVYIKQENLYYTAC----ASEGCNKKVNLDHENNWRCEKCDRSYATPEYRYILSTNVAD 352
Query: 558 QTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEEL 617
TG W++ F E +++G A EL+ L+ E + + F + Y+F + K +
Sbjct: 353 ATGQMWLSGFNEDATQLIGMSAGELHKLREESESE--FSAALHRAANRMYMFNCRAKMDT 410
Query: 618 YGDEQRVKITVIRADQVNYSSESRYLLDLI 647
+ D RV+ T+ RA V+++ L+D I
Sbjct: 411 FNDTARVRYTISRAAPVDFAKAGMELVDAI 440
>gi|15239494|ref|NP_200908.1| Replication factor-A protein 1-like protein [Arabidopsis thaliana]
gi|10177323|dbj|BAB10649.1| replication protein A1 [Arabidopsis thaliana]
gi|28393124|gb|AAO41995.1| putative RNA helicase [Arabidopsis thaliana]
gi|332010026|gb|AED97409.1| Replication factor-A protein 1-like protein [Arabidopsis thaliana]
Length = 629
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 206/663 (31%), Positives = 353/663 (53%), Gaps = 56/663 (8%)
Query: 1 MPVNLTPNSISLI------NGGDVNSKPLVQVMDIKLIGSTQERYRFLISDSVSTQHAML 54
M ++TP++IS + + S+ +VQV+D+K IG+ RY F +D + AM
Sbjct: 1 MQTSVTPDAISTVLSNPSFDSSSDRSEIVVQVVDLKPIGN---RYTFSANDGKTKVKAMF 57
Query: 55 ATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESE 114
L + +G+++ +++LID+ + + ++ L + CE +G+ +SE
Sbjct: 58 TASLTPEIISGKIQNLGLIRLIDFTVNDISSKSTKYFL-----VTKCEAVGS---VLDSE 109
Query: 115 LTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGS 174
+ +P + +P S ++ ++G + F A +A
Sbjct: 110 INLDSKSGEEEAREPKKQKLEHSPVSPLNDVVSTG---------ITLKPKQEFVAKSASQ 160
Query: 175 IVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLR 234
I+ + N P + R+ P+ +LNPYQG W IK RVT KG +R
Sbjct: 161 IMSEQRG-------------NAAPAARMAMTRRVHPLVSLNPYQGNWTIKVRVTNKGVMR 207
Query: 235 RYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNF 294
Y NARG+G VF+ +L D +G +I+ T FN +F++ ++G+VY IS+GSLK A K F
Sbjct: 208 NYKNARGEGCVFNVELTDEEGTQIQATMFNDAARKFFDRFQLGKVYYISRGSLKLANKQF 267
Query: 295 NHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAEN-NSIVDVIGIVISVN 353
++N++E+ L S V+ + E+ IP+ +F+F I E+ N ++D+IG+V SV+
Sbjct: 268 KTVQNDYEMTLNENSEVEEASSEEMFIPETKFNFVPIEELGLYVNQKELIDLIGVVQSVS 327
Query: 354 PSVPILRKNGMET-QRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVK 412
P++ I R+ E +R + L D S ++V ++LW D GQ+L +M D PV+++K
Sbjct: 328 PTMSIRRRTDNEMIPKRDITLADESRKTVVVSLWNDLATGIGQELLDMADQS--PVIAIK 385
Query: 413 SGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREI---AAGGA 469
S KV DF G S+ TI + + INP+ EA +L+ WFDS GK + SI + A G+
Sbjct: 386 SLKVGDFQGVSLSTISRSNVVINPESPEAKKLKSWFDSEGKEISMSSIGSGMSPSAKNGS 445
Query: 470 KNEIHKTV--SQIKNEGLGRSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKKV 526
++ V S I + EKP + + RA+I+FIK D + Y AC + CNKKV
Sbjct: 446 RSLYTDRVLLSHITSNPSLFEEKPVFFSTRAYISFIKPDQTMWYQAC------KTCNKKV 499
Query: 527 TQSGNR-WQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYML 585
T++ + + C+ C ++ +EC RY++ ++ D +G TW+++F + E+ILGC A EL L
Sbjct: 500 TEALDSGYWCEGCQRKYEECSLRYIMAVKVTDSSGETWISSFNDEAEKILGCSADELNKL 559
Query: 586 KYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLD 645
K E + + ++ ++ ++FR+ + + Y E+R ++TV +++++E+R LL
Sbjct: 560 KSEEGEVNEYQTKLKEATWSSHVFRVSVTQNEYNGEKRQRVTVKGVAPLDFAAETRLLLQ 619
Query: 646 LIS 648
IS
Sbjct: 620 DIS 622
>gi|223942895|gb|ACN25531.1| unknown [Zea mays]
gi|414865518|tpg|DAA44075.1| TPA: replication protein A DNA-binding subunit [Zea mays]
Length = 617
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 175/464 (37%), Positives = 272/464 (58%), Gaps = 19/464 (4%)
Query: 195 NHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSD 254
N P+ R+ P+ LNPYQG W IK RVT+KG+LR Y NARG+G VF+ +L D D
Sbjct: 161 NTAPVKPLSMTKRVHPLITLNPYQGNWVIKVRVTSKGNLRTYRNARGEGCVFNVELTDED 220
Query: 255 GGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLC 314
G +I+ T FN +FY I E+G+VY +SKGSL+ A K F ++N++E+ L + V+
Sbjct: 221 GTQIQATMFNDAAKKFYPIFELGKVYYVSKGSLRIANKQFKTVQNDYEMSLNENAIVEE- 279
Query: 315 TEEDDSIPKQQFSFRHISEIES-AENNSIVDVIGIVISVNPSVPILRKNGMET-QRRILN 372
E + IP+ Q++ I ++ S +VD++G+V SV+P++ + RK ET +R +
Sbjct: 280 AEGETCIPQVQYNLVKIDQLGSYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIV 339
Query: 373 LKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQL 432
+ D SG++V ++LW D GQ+L M D PV+++KS KV+DF G S+ T+ + L
Sbjct: 340 VADDSGKTVSISLWNDLATTTGQELLNMADSS--PVVAIKSLKVSDFQGVSLSTVGKSTL 397
Query: 433 FINPDFAEAHELREWFDSGGKNAATVSISREIA---AGGAKNEIHKTV--SQIKNEGLGR 487
INPD EA L+ W+DS GK+ + I E+ AGG K+ V S I ++
Sbjct: 398 AINPDLHEAQNLKSWYDSEGKDTSLAPIGAEMGAARAGGFKSTYSDRVFLSHITSDPAMG 457
Query: 488 SEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKKVTQS-GNRWQCDRCNQEIDEC 545
EKP + ++ A I+ IK D + Y AC + CNKKVT++ G+ + C+ C + EC
Sbjct: 458 QEKPVFFSLYATISHIKPDQNMWYRAC------KTCNKKVTETFGSGYWCEGCQKNDSEC 511
Query: 546 DYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFN 605
RY++ ++ D TG W + F E E+I+GC A EL ++ E DD + ++ +
Sbjct: 512 SLRYIMVIKVSDPTGEAWFSVFNEHAEKIIGCSADELDRIRKEEGDD-SYVLKLKEATWV 570
Query: 606 QYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+LFR+ + + Y +E+R +ITV V +++ES+YLL+ I+K
Sbjct: 571 PHLFRVSVTQHEYNNEKRQRITVRSEAPVEHAAESKYLLEQIAK 614
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 23 LVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICST 82
+VQV+D+K +G T R+ F +D AML T V++G +K ++++IDY C+
Sbjct: 31 VVQVLDLKSVG-TGSRFSFTATDGKDKIKAMLPTNFGSEVRSGNLKNLGLIRIIDYTCNV 89
Query: 83 VQNR--KIIVVLNMETII--LDCEPIGNPK 108
V+ + K++VV+ E + LD E G K
Sbjct: 90 VKGKDDKVLVVIKCELVCQALDAEINGEAK 119
>gi|443926858|gb|ELU45414.1| damaged DNA binding protein [Rhizoctonia solani AG-1 IA]
Length = 1077
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 208/659 (31%), Positives = 332/659 (50%), Gaps = 96/659 (14%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHAMLATQL 58
M TP++I GD +P++Q++ IK + G + +RYR + SD +MLAT+L
Sbjct: 499 MTTEFTPDAI-----GDF--QPVLQLLSIKKVSSGGSSDRYRLVYSDGEYHCQSMLATKL 551
Query: 59 NDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILD-CEPIGNPKIFSESELTA 117
ND + +++L C+ M + D E IGNP F ++E A
Sbjct: 552 NDYFTSQDFTPKCIIRLTR--CA------------MNLKVDDYSEKIGNPVNFDKAENQA 597
Query: 118 QKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVR 177
+ P++ + + + S P SG P ++
Sbjct: 598 G-----------------AGPSAMDVDPAPAAPAPAPPKAVPSGPTSG----PATNTLPA 636
Query: 178 SFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYN 237
F P + PI AL+PY +W I+ARVT K D+R ++
Sbjct: 637 GFAP--------------------------LHPIEALSPYSNKWTIRARVTQKSDIRTWS 670
Query: 238 NARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHL 297
N RG+GK+FS +L+D + GEIR T FN VVD Y +E G+VY SK ++ A+K F++L
Sbjct: 671 NQRGEGKLFSVNLMD-ETGEIRATGFNEVVDNLYSKLEEGKVYWFSKARVQLAKKQFSNL 729
Query: 298 KNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVP 357
N++EI LE + C E++ ++PK QF+F +S+++ E +++VDV+G+V V P
Sbjct: 730 SNDYEIALERQTEAIPC-EDESAVPKVQFNFTELSQLDGVEKDAMVDVLGVVTEVKPIET 788
Query: 358 I-LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKV 416
I ++ G +R + + D SG SV +T+WG K+ + Q + PV++ K KV
Sbjct: 789 INVKSTGKTVSKRDVTVVDKSGSSVRMTIWG----KQAETFQAENN----PVIAFKGVKV 840
Query: 417 NDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGG-----KNAATVSISREIAAGGAKN 471
DF G+++ + S+ + +PDF EAH L+ W+ S G K+ +T + G N
Sbjct: 841 GDFGGRTLSLVSSSTMTFHPDFPEAHALQGWYSSEGHSQTFKSQSTGGMGAGGGGVGTIN 900
Query: 472 EIH-KTVSQIKNEGLGRSE--KPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ 528
KT+ +K E LG E K D+ T RA I IKSD+ Y AC G C+KKVT+
Sbjct: 901 RREMKTLQAVKEENLGMGEEGKTDFFTTRATIIHIKSDNIMYPAC----GSDNCSKKVTE 956
Query: 529 SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYE 588
+ W+C++C + + +YRY++ + D T W+ F + GE ILG A EL+ LK E
Sbjct: 957 VHDGWRCEKCEKTFPKPNYRYIMSLSVADYTQTAWLQVFNDPGELILGMTASELHELKEE 1016
Query: 589 LQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
++ + I ++F+ + ++ Y D+ RV+ V RA +++Y+ ESR LL+ I
Sbjct: 1017 --NEASYTTAIEKATSQTWMFQCRAQQSTYQDQSRVRYGVNRAHKIDYAQESRALLEAI 1073
>gi|259483725|tpe|CBF79351.1| TPA: subunit of heterotrimeric Replication Factor (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 603
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 204/639 (31%), Positives = 335/639 (52%), Gaps = 77/639 (12%)
Query: 20 SKPLVQVMDIKLI---GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLI 76
S+P+VQ + +K + + QERYR + SD + MLA Q N V G ++KG V+L
Sbjct: 25 SEPIVQCVQVKPLPPQANNQERYRVVFSDISNYVQTMLAIQANHFVTDGLLRKGCFVRLK 84
Query: 77 DYICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNN 134
+ ++V+ +KI++VL++E + + + E +G PK +K PQP +++
Sbjct: 85 QFQANSVKGKKILIVLDLEVLKELGEAEKLGEPKPLESKAEEEEK-------PQPTTISS 137
Query: 135 YSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFR 194
+G + + +A NA S + S +P
Sbjct: 138 -------------NGFYGA--------------KAQNAPSQISSRAQHTRP--------- 161
Query: 195 NHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSD 254
++ APA I PI A++PY +W IKAR T+K ++ ++ GDG +FS +LLD D
Sbjct: 162 -----MQGSAPATIYPIEAISPYAHKWTIKARCTSKSPIKTFHGRSGDGTLFSVNLLD-D 215
Query: 255 GGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVDL 313
GEIR T FN Y++ + G VY IS ++ A+K F +L N++E+ E + V+
Sbjct: 216 SGEIRATGFNEQCSALYDLFQEGEVYYISSPCRVQIAKKQFTNLNNDYELTFERDTLVEK 275
Query: 314 CTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMET-QRRILN 372
E++D +P+ +F+F I +++S E ++ +DVIG++ V + I+ K + +R L
Sbjct: 276 AEEQND-VPQVRFNFTTIGDLQSVEKDTTIDVIGVLKDVGETTQIVSKTTKKPYDKRELT 334
Query: 373 LKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFP--VLSVKSGKVNDFSGKSIGTIPST 430
L D +G SV LT+WG ++ P V++ K KV+DF GKS+ + S
Sbjct: 335 LVDNTGFSVRLTIWG----------TTAMNFAASPESVVAFKGVKVSDFGGKSLSLLSSG 384
Query: 431 QLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGA-KNEIHKTVSQIKNEGLGRSE 489
+ ++PD EAH L+ W+D+ G+N S + + A K + KT++Q++ E LG SE
Sbjct: 385 SVTVDPDIEEAHRLKGWYDAQGRNENFASHASSVGTMSATKRDQLKTIAQVREEQLGMSE 444
Query: 490 KPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYR 548
+P + T+RA + +IK D+ CY AC L G CNKKVT+ +W+C+RC++ +YR
Sbjct: 445 EPSYFTLRATVVYIKQDNLCYPAC-LSEG---CNKKVTEVDPGQWRCERCDKTHPRAEYR 500
Query: 549 YLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYL 608
Y++ + D TG ++ F + G +LG A +L L D G +I++ +
Sbjct: 501 YIMLVNVSDHTGQLYLNCFDDVGRLLLGMSANQLMELPQ--NDGKALGNVIQNATCRTWT 558
Query: 609 FRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
F + K + YGD+QR++ V A VNYS E+ L D+I
Sbjct: 559 FGCRAKIDHYGDQQRIRYQVSYAKPVNYSEEASRLADII 597
>gi|67900872|ref|XP_680692.1| hypothetical protein AN7423.2 [Aspergillus nidulans FGSC A4]
gi|40742813|gb|EAA62003.1| hypothetical protein AN7423.2 [Aspergillus nidulans FGSC A4]
Length = 606
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 204/639 (31%), Positives = 335/639 (52%), Gaps = 77/639 (12%)
Query: 20 SKPLVQVMDIKLI---GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLI 76
S+P+VQ + +K + + QERYR + SD + MLA Q N V G ++KG V+L
Sbjct: 28 SEPIVQCVQVKPLPPQANNQERYRVVFSDISNYVQTMLAIQANHFVTDGLLRKGCFVRLK 87
Query: 77 DYICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNN 134
+ ++V+ +KI++VL++E + + + E +G PK +K PQP +++
Sbjct: 88 QFQANSVKGKKILIVLDLEVLKELGEAEKLGEPKPLESKAEEEEK-------PQPTTISS 140
Query: 135 YSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFR 194
+G + + +A NA S + S +P
Sbjct: 141 -------------NGFYGA--------------KAQNAPSQISSRAQHTRP--------- 164
Query: 195 NHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSD 254
++ APA I PI A++PY +W IKAR T+K ++ ++ GDG +FS +LLD D
Sbjct: 165 -----MQGSAPATIYPIEAISPYAHKWTIKARCTSKSPIKTFHGRSGDGTLFSVNLLD-D 218
Query: 255 GGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVDL 313
GEIR T FN Y++ + G VY IS ++ A+K F +L N++E+ E + V+
Sbjct: 219 SGEIRATGFNEQCSALYDLFQEGEVYYISSPCRVQIAKKQFTNLNNDYELTFERDTLVEK 278
Query: 314 CTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMET-QRRILN 372
E++D +P+ +F+F I +++S E ++ +DVIG++ V + I+ K + +R L
Sbjct: 279 AEEQND-VPQVRFNFTTIGDLQSVEKDTTIDVIGVLKDVGETTQIVSKTTKKPYDKRELT 337
Query: 373 LKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFP--VLSVKSGKVNDFSGKSIGTIPST 430
L D +G SV LT+WG ++ P V++ K KV+DF GKS+ + S
Sbjct: 338 LVDNTGFSVRLTIWG----------TTAMNFAASPESVVAFKGVKVSDFGGKSLSLLSSG 387
Query: 431 QLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGA-KNEIHKTVSQIKNEGLGRSE 489
+ ++PD EAH L+ W+D+ G+N S + + A K + KT++Q++ E LG SE
Sbjct: 388 SVTVDPDIEEAHRLKGWYDAQGRNENFASHASSVGTMSATKRDQLKTIAQVREEQLGMSE 447
Query: 490 KPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYR 548
+P + T+RA + +IK D+ CY AC L G CNKKVT+ +W+C+RC++ +YR
Sbjct: 448 EPSYFTLRATVVYIKQDNLCYPAC-LSEG---CNKKVTEVDPGQWRCERCDKTHPRAEYR 503
Query: 549 YLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYL 608
Y++ + D TG ++ F + G +LG A +L L D G +I++ +
Sbjct: 504 YIMLVNVSDHTGQLYLNCFDDVGRLLLGMSANQLMELPQ--NDGKALGNVIQNATCRTWT 561
Query: 609 FRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
F + K + YGD+QR++ V A VNYS E+ L D+I
Sbjct: 562 FGCRAKIDHYGDQQRIRYQVSYAKPVNYSEEASRLADII 600
>gi|453084498|gb|EMF12542.1| replication factor A 1, rfa1 [Mycosphaerella populorum SO2202]
Length = 624
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 207/657 (31%), Positives = 339/657 (51%), Gaps = 62/657 (9%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLIG---STQERYRFLISDSVSTQHAMLATQLNDR 61
+T + I G+ P++Q + IK + QER+R + SD+V+ M++ Q N
Sbjct: 8 VTHGVLRRITAGEEVMDPVLQCVQIKPMAQGAGGQERWRVVFSDTVNFIQGMISMQSNHL 67
Query: 62 VKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTI 121
+ G +KKG V +L + + V+++ I+++++++ + + + E E
Sbjct: 68 ITEGTLKKGMVCRLKSFQANFVKDKHILIIIDLDVL----------QEYGEQE------- 110
Query: 122 PSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQP 181
L PV + P + G N + P + P A P
Sbjct: 111 ---KLGTPVAIEGGQKPEAQAEVKPQPGNITGNN--FYGQPQ----QKPQA--------P 153
Query: 182 TVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARG 241
Q P + P+ N N I PI A++PY +W IKAR T KGD++ ++N G
Sbjct: 154 VKQEPQRSLPSRTNGAS--HNGPHGNITPIEAISPYTHKWTIKARCTHKGDIKTWHNKNG 211
Query: 242 DGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNE 300
+GK+FS + LD + GEIR T FN VD+++E+++ G VY IS ++ A+K F++L N+
Sbjct: 212 EGKLFSANFLD-ESGEIRATMFNDQVDQWHEVLQEGSVYYISSPCRVQLAKKQFSNLPND 270
Query: 301 WEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILR 360
+E+ E + V+ E++D +P+ +++F I +++ E +S +DVIG+V V I+
Sbjct: 271 YELTFENQTLVEKA-EDNDGVPQVRYNFITIEALQTVEKDSTIDVIGVVSEVGEVNEIVS 329
Query: 361 KNGMET-QRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDF 419
K + +R L L D +G +V LT+WG K E D V++ K KV DF
Sbjct: 330 KTTSKPYSKRDLTLVDDTGYNVRLTIWG--------KTAESFDAQPESVIAFKGVKVGDF 381
Query: 420 SGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVS----ISREIAAGGAKNEIHK 475
G+S+ + S + +NP+ EA +L+ W+ + G N S +S A GGA K
Sbjct: 382 GGRSLSLLSSGSMNVNPEIDEAFKLKGWYSASGHNETFASHANTMSTAGATGGAGRNDTK 441
Query: 476 TVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQ-CNKKV--TQSGNR 532
T+SQ+++E LG ++ DW + +A I +IK D+F Y AC D Q CNKKV + GN
Sbjct: 442 TISQVRDENLGMTDDTDWFSTKATIIYIKQDNFAYPAC--QTTDPQPCNKKVLEVEEGN- 498
Query: 533 WQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDD 592
W+C++C++ YRY++ + D TG W++ F E G++ILG PA +L +K E DD
Sbjct: 499 WRCEKCDKSWPSPKYRYIISVNVSDHTGQIWLSCFDEVGQQILGMPANDLMAMKEE-GDD 557
Query: 593 VRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
R E Y+FR K K + + D+QRV+ V A ++Y E++ L D+I +
Sbjct: 558 KRVSEAFSDANCKSYIFRCKAKMDTFQDQQRVRYQVQYARTIDYVQEAKRLADIIKQ 614
>gi|281342356|gb|EFB17940.1| hypothetical protein PANDA_006470 [Ailuropoda melanoleuca]
Length = 563
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 202/599 (33%), Positives = 316/599 (52%), Gaps = 55/599 (9%)
Query: 53 MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEP----IGNPK 108
MLATQLN V+ Q+ + Q+ +I +T+++ + +V+L I+ E IGNP
Sbjct: 4 MLATQLNPLVEEEQLSSNCICQINRFIVNTLKDGRRVVILMELDILKSAEAVGLKIGNPV 63
Query: 109 IFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFR 168
++E Q+ +PS PV SAP + S S ++ S TF
Sbjct: 64 PYNEGH-GQQQVVPS-----PVSA--ASAPANKPQQQNGSSAMGSTTSKTYGA--SKTFG 113
Query: 169 APNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVT 228
S+ S T +++PIA+L PYQ +W I ARVT
Sbjct: 114 KAGGTSLANSAGGT----------------------QVKVVPIASLTPYQSKWTICARVT 151
Query: 229 AKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLK 288
K +R ++N+RG+GK+FS +L+D + GEIR T FN VD+F+ +I++ +VY ISKG LK
Sbjct: 152 NKSQIRTWSNSRGEGKLFSIELVD-ESGEIRATAFNEQVDKFFPLIDMNKVYYISKGILK 210
Query: 289 PAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGI 348
A K F +KN++E+ ++V C E+ +P QF F I ++E+ +S++D+IGI
Sbjct: 211 IANKQFTAVKNDYEMTFNNETSVMPC-EDGHHLPTVQFDFTGIGDLENKPKDSLIDIIGI 269
Query: 349 VISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFP 407
S + I ++ N E +R + L D SG+ V TLWG+ ++ Q P
Sbjct: 270 CKSYEDATKITVKSNNREVSKRNIYLMDMSGKVVTATLWGEDADRFDGSRQ--------P 321
Query: 408 VLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG 467
V+++K +V+DF G+S+ + S+ + +NPD EA++LR WFDS G+ VSIS + G
Sbjct: 322 VMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQALDGVSISDLKSGG 381
Query: 468 -GAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKV 526
G N KT+ ++K+E LG +K D+ + A + +++ ++ Y ACP + CNKKV
Sbjct: 382 TGGSNTNWKTLYEVKSENLGHGDKADYFSSVATVVYLRKENCMYQACPT----QDCNKKV 437
Query: 527 T-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYML 585
Q ++C++C+ E YR +L I D WVT FQES E I+G L L
Sbjct: 438 IDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQENQWVTCFQESAEAIIGQSTSYLGEL 497
Query: 586 KYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
K +++ F EI ++ F + FR+++K E Y DE R+K TV+ V+Y R L+
Sbjct: 498 KD--KNEQAFEEIFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDYREYGRRLI 554
>gi|6319321|ref|NP_009404.1| Rfa1p [Saccharomyces cerevisiae S288c]
gi|132473|sp|P22336.1|RFA1_YEAST RecName: Full=Replication factor A protein 1; Short=RF-A protein 1;
AltName: Full=DNA-binding protein BUF2; AltName:
Full=Replication protein A 69 kDa DNA-binding subunit;
AltName: Full=Single-stranded DNA-binding protein
gi|4312|emb|CAA42420.1| replication factor-A protein 1 [Saccharomyces cerevisiae]
gi|172466|gb|AAA34994.1| single stranded DNA binding protein [Saccharomyces cerevisiae]
gi|349752|gb|AAC04960.1| Rfa1p: Subunit of replication factor RF-A [Saccharomyces
cerevisiae]
gi|410541|gb|AAB27889.1| BUF2 [Saccharomyces cerevisiae]
gi|151941394|gb|EDN59765.1| RF-A [Saccharomyces cerevisiae YJM789]
gi|285810203|tpg|DAA06989.1| TPA: Rfa1p [Saccharomyces cerevisiae S288c]
gi|392301278|gb|EIW12366.1| Rfa1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 621
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 193/627 (30%), Positives = 331/627 (52%), Gaps = 73/627 (11%)
Query: 42 LISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRK--IIVVLNMETIIL 99
+ISD + A+L Q + ++ ++++G ++++I + V+ RK +++V + E +
Sbjct: 49 MISDGIYHMKALLRNQAASKFQSMELQRGDIIRVIIAEPAIVRERKKYVLLVDDFELVQS 108
Query: 100 DCEPIGNPKIFSESELTAQ--KTIPSNNLPQPVRV-NNYSAPNSGTFNLQNSGTFNSQNP 156
+ + F ++ + +T+ ++ V N +A N+G ++ +S + + N
Sbjct: 109 RADMVNQTSTFLDNYFSEHPNETLKDEDITDSGNVANQTNASNAGVPDMLHSNSNLNANE 168
Query: 157 GSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNP 216
F+ N PN + PI I L+P
Sbjct: 169 RKFANEN---------------------------PNSQKTRPIF---------AIEQLSP 192
Query: 217 YQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEV 276
YQ W IKARV+ KG+++ ++N RGDGK+F+ + LD+ GEIR T FN +F EI++
Sbjct: 193 YQNVWTIKARVSYKGEIKTWHNQRGDGKLFNVNFLDT-SGEIRATAFNDFATKFNEILQE 251
Query: 277 GRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIES 336
G+VY +SK L+PA+ F +L + +E+ L+ + ++ C +E + +PK F+F + I++
Sbjct: 252 GKVYYVSKAKLQPAKPQFTNLTHPYELNLDRDTVIEECFDESN-VPKTHFNFIKLDAIQN 310
Query: 337 AENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG----DFCNK 392
E NS VDV+GI+ ++NP + + G + RR + + D SG S+ + LW DF
Sbjct: 311 QEVNSNVDVLGIIQTINPHFELTSRAGKKFDRRDITIVDDSGFSISVGLWNQQALDFNLP 370
Query: 393 EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGG 452
EG V ++K +V DF GKS+ S+ L NP+ EA+ L+ W+DS G
Sbjct: 371 EGS------------VAAIKGVRVTDFGGKSLSMGFSSTLIPNPEIPEAYALKGWYDSKG 418
Query: 453 KNAATVSISREIAAGG-AKNEIHK------TVSQIKNEGLGRSEKPDWVTVRAFITFIKS 505
+NA +++ +E GG + + K T+++ + E LGRSEK D+ +V+A I+F+K
Sbjct: 419 RNANFITLKQEPGMGGQSAASLTKFIAQRITIARAQAENLGRSEKGDFFSVKAAISFLKV 478
Query: 506 DSFCYTACPLMIGDRQCNKKV-TQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWV 564
D+F Y AC + CNKKV Q W+C++C+ ++RY+L I D+T W+
Sbjct: 479 DNFAYPAC----SNENCNKKVLEQPDGTWRCEKCDTNNARPNWRYILTISIIDETNQLWL 534
Query: 565 TAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRV 624
T F + +++LG A L LK E D F +I +S N+Y FR++ +E+ Y D+ R+
Sbjct: 535 TLFDDQAKQLLGVDANTLMSLKEE--DPNEFTKITQSIQMNEYDFRIRAREDTYNDQSRI 592
Query: 625 KITVIRADQVNYSSESRYLLDLISKSF 651
+ TV +NY +E+ YL D +SK+
Sbjct: 593 RYTVANLHSLNYRAEADYLADELSKAL 619
>gi|207347969|gb|EDZ73967.1| YAR007Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270812|gb|EEU05961.1| Rfa1p [Saccharomyces cerevisiae JAY291]
gi|259144715|emb|CAY77656.1| Rfa1p [Saccharomyces cerevisiae EC1118]
gi|323310280|gb|EGA63470.1| Rfa1p [Saccharomyces cerevisiae FostersO]
gi|323334809|gb|EGA76181.1| Rfa1p [Saccharomyces cerevisiae AWRI796]
gi|323349907|gb|EGA84118.1| Rfa1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323356339|gb|EGA88141.1| Rfa1p [Saccharomyces cerevisiae VL3]
gi|349576254|dbj|GAA21426.1| K7_Rfa1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 621
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 193/627 (30%), Positives = 331/627 (52%), Gaps = 73/627 (11%)
Query: 42 LISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRK--IIVVLNMETIIL 99
+ISD + A+L Q + ++ ++++G ++++I + V+ RK +++V + E +
Sbjct: 49 MISDGIYHMKALLRNQAASKFQSMELQRGDIIRVIIAEPAIVRERKKYVLLVDDFELVQS 108
Query: 100 DCEPIGNPKIFSESELTAQ--KTIPSNNLPQPVRV-NNYSAPNSGTFNLQNSGTFNSQNP 156
+ + F ++ + +T+ ++ V N +A N+G ++ +S + + N
Sbjct: 109 RADMVNQTSTFLDNYFSEHPNETLKDEDITDSGNVANQTNASNAGVPDMLHSNSNLNANE 168
Query: 157 GSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNP 216
F+ N PN + PI I L+P
Sbjct: 169 RKFANEN---------------------------PNSQKTRPIF---------AIEQLSP 192
Query: 217 YQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEV 276
YQ W IKARV+ KG+++ ++N RGDGK+F+ + LD+ GEIR T FN +F EI++
Sbjct: 193 YQNVWTIKARVSYKGEIKTWHNQRGDGKLFNVNFLDT-SGEIRATAFNDFATKFNEILQE 251
Query: 277 GRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIES 336
G+VY +SK L+PA+ F +L + +E+ L+ + ++ C +E + +PK F+F + I++
Sbjct: 252 GKVYYVSKAKLQPAKPQFTNLTHPYELNLDRDTVIEECFDESN-VPKTHFNFIKLDAIQN 310
Query: 337 AENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG----DFCNK 392
E NS VDV+GI+ ++NP + + G + RR + + D SG S+ + LW DF
Sbjct: 311 QEVNSNVDVLGIIQTINPHFELTSRAGKKFDRRDITIVDDSGFSISVGLWNQQALDFNLP 370
Query: 393 EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGG 452
EG V ++K +V DF GKS+ S+ L NP+ EA+ L+ W+DS G
Sbjct: 371 EGS------------VAAIKGVRVTDFGGKSLSMGFSSTLIPNPEIPEAYALKGWYDSKG 418
Query: 453 KNAATVSISREIAAGG-AKNEIHK------TVSQIKNEGLGRSEKPDWVTVRAFITFIKS 505
+NA +++ +E GG + + K T+++ + E LGRSEK D+ +V+A I+F+K
Sbjct: 419 RNANFITLKQEPGMGGQSAASLTKFIAQRITIARAQAENLGRSEKGDFFSVKAAISFLKV 478
Query: 506 DSFCYTACPLMIGDRQCNKKV-TQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWV 564
D+F Y AC + CNKKV Q W+C++C+ ++RY+L I D+T W+
Sbjct: 479 DNFAYPAC----SNENCNKKVLEQPDGTWRCEKCDTNNARPNWRYILTISIIDETNQLWL 534
Query: 565 TAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRV 624
T F + +++LG A L LK E D F +I +S N+Y FR++ +E+ Y D+ R+
Sbjct: 535 TLFDDQAKQLLGVDANTLMSLKEE--DPNEFTKITQSIQMNEYDFRIRAREDTYNDQSRI 592
Query: 625 KITVIRADQVNYSSESRYLLDLISKSF 651
+ TV +NY +E+ YL D +SK+
Sbjct: 593 RYTVANLHSLNYRAEADYLADELSKAL 619
>gi|365767235|gb|EHN08720.1| Rfa1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 621
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 193/627 (30%), Positives = 331/627 (52%), Gaps = 73/627 (11%)
Query: 42 LISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRK--IIVVLNMETIIL 99
+ISD + A+L Q + ++ ++++G ++++I + V+ RK +++V + E +
Sbjct: 49 MISDGIYHMKALLRNQAASKFQSMELQRGDIIRVIIAEPAIVRERKKYVLLVDDFELVQS 108
Query: 100 DCEPIGNPKIFSESELTAQ--KTIPSNNLPQPVRV-NNYSAPNSGTFNLQNSGTFNSQNP 156
+ + F ++ + +T+ ++ V N +A N+G ++ +S + + N
Sbjct: 109 RADMVNQTSTFLDNYFSEHPNETLKDEDITDSGNVANQTNASNAGVPDMLHSNSNLNANE 168
Query: 157 GSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNP 216
F+ N PN + PI I L+P
Sbjct: 169 RKFANEN---------------------------PNSQKTRPIF---------AIEQLSP 192
Query: 217 YQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEV 276
YQ W IKARV+ KG+++ ++N RGDGK+F+ + LD+ GEIR T FN +F EI++
Sbjct: 193 YQNVWTIKARVSYKGEIKTWHNQRGDGKLFNVNFLDT-SGEIRATAFNDFATKFNEILQE 251
Query: 277 GRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIES 336
G+VY +SK L+PA+ F +L + +E+ L+ + ++ C +E + +PK F+F + I++
Sbjct: 252 GKVYYVSKAKLQPAKPQFTNLXHPYELNLDRDTVIEECFDESN-VPKTHFNFIKLDAIQN 310
Query: 337 AENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG----DFCNK 392
E NS VDV+GI+ ++NP + + G + RR + + D SG S+ + LW DF
Sbjct: 311 QEVNSNVDVLGIIQTINPHFELTSRAGKKFDRRDITIVDDSGFSISVGLWNQQALDFNLP 370
Query: 393 EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGG 452
EG V ++K +V DF GKS+ S+ L NP+ EA+ L+ W+DS G
Sbjct: 371 EGS------------VAAIKGVRVTDFGGKSLSMGFSSTLIPNPEIPEAYALKGWYDSKG 418
Query: 453 KNAATVSISREIAAGG-AKNEIHK------TVSQIKNEGLGRSEKPDWVTVRAFITFIKS 505
+NA +++ +E GG + + K T+++ + E LGRSEK D+ +V+A I+F+K
Sbjct: 419 RNANFITLKQEPGMGGQSAASLTKFIAQRITIARAQAENLGRSEKGDFFSVKAAISFLKV 478
Query: 506 DSFCYTACPLMIGDRQCNKKV-TQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWV 564
D+F Y AC + CNKKV Q W+C++C+ ++RY+L I D+T W+
Sbjct: 479 DNFAYPAC----SNENCNKKVLEQPDGTWRCEKCDTNNARPNWRYILTISIIDETNQLWL 534
Query: 565 TAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRV 624
T F + +++LG A L LK E D F +I +S N+Y FR++ +E+ Y D+ R+
Sbjct: 535 TLFDDQAKQLLGVDANTLMSLKEE--DPNEFTKITQSIQMNEYDFRIRAREDTYNDQSRI 592
Query: 625 KITVIRADQVNYSSESRYLLDLISKSF 651
+ TV +NY +E+ YL D +SK+
Sbjct: 593 RYTVANLHSLNYRAEADYLADELSKAL 619
>gi|345565697|gb|EGX48646.1| hypothetical protein AOL_s00080g275 [Arthrobotrys oligospora ATCC
24927]
Length = 606
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 192/637 (30%), Positives = 337/637 (52%), Gaps = 74/637 (11%)
Query: 22 PLVQVMDIKLI---GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
P++Q++ +K I G T ERYR ++SD + M+A+Q N + +++KGS+V++ +Y
Sbjct: 28 PIMQILLVKKIEAQGKTPERYRIVVSDGIHFTQGMIASQSNHLMAENKIEKGSIVRMKEY 87
Query: 79 ICSTVQNRKIIVVLNMETIILDC-EPIGNPKIF---SESELTAQKTIPSNNLPQPVRVNN 134
V+++ +++VL +E E IG+PK S SEL Q+ QP +N
Sbjct: 88 EAGKVKDKSVLIVLAVELAQEATEEKIGDPKQVTPDSASELAQQRA-----AQQPTTTSN 142
Query: 135 YSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFR 194
+ G S+ G S R +AG
Sbjct: 143 FYGNKPANAGRGAGGAGPSRGAGQSS-------RGQSAG--------------------- 174
Query: 195 NHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSD 254
I I +L+PYQ RW IKAR +G+++ + NA+GDGK+F+ D
Sbjct: 175 -------------ISLIESLSPYQNRWTIKARCIHRGEIKNWKNAKGDGKLFAVSFKDQ- 220
Query: 255 GGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLC 314
EI+ T F VD Y + E G VYLISK ++ A++ F+++ N++E+ + S V
Sbjct: 221 SAEIKATGFGDQVDSLYHVFEEGSVYLISKCKVQIAKRQFSNIDNDYELVFDRDSEVQKV 280
Query: 315 TEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILR-KNGMETQRRILNL 373
++D+ +P+QQ++F + ++++ E ++ +DVIGI+ V S I+ K +R L+L
Sbjct: 281 -DDDEGVPQQQYNFVTLQDLQNTEKDAQIDVIGILKEVGESDSIVSAKTQKAFTKRDLHL 339
Query: 374 KDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF 433
D +G +V+LT+WG K +K + M + VL+VK KV+DF G+S+ S+ +
Sbjct: 340 VDDTGYTVKLTVWG----KSAEKFEIMPE----SVLAVKGVKVSDFGGRSLSMQNSSTMQ 391
Query: 434 INPDFAEAHELREWFDSGGKNAATVSISREIAAGGA---KNEIHKTVSQIKNEGLGRSEK 490
++PD EAH L+ WF S G++ + + ++ GGA + + KTV Q +E +G E
Sbjct: 392 VDPDLEEAHRLKGWFSSEGRD-TNFNSHKGLSTGGADGNRPSVFKTVQQASDENIGFGET 450
Query: 491 PDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYL 550
D+ T++A I++IK++ Y AC C+KKV + W+C++C+ E +YRY+
Sbjct: 451 ADFYTLKATISYIKNEGHSYPACKT----EGCSKKVVEFNGSWRCEKCSVNWPEPEYRYI 506
Query: 551 LQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFR 610
L D TG TW+ F ++G+ I+G A +L+ + + D+ + ++ ++FR
Sbjct: 507 LTCSAYDHTGQTWLNIFDDAGKVIMGTTASDLHAM--QDYDESSYEATMKKAASQTWMFR 564
Query: 611 LKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
++ ++E+Y D RV+ V+ A +++Y++E+ L+++I
Sbjct: 565 IRAQQEVYQDVPRVRNRVLSAQKIDYAAEATRLINMI 601
>gi|190406650|gb|EDV09917.1| RF-A [Saccharomyces cerevisiae RM11-1a]
Length = 621
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 193/627 (30%), Positives = 331/627 (52%), Gaps = 73/627 (11%)
Query: 42 LISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRK--IIVVLNMETIIL 99
+ISD + A+L Q + ++ ++++G ++++I + V+ RK +++V + E +
Sbjct: 49 MISDGIYHMKALLRNQAASKFQSMELQRGDIIRVIIAEPAIVRERKKYVLLVDDFELVQS 108
Query: 100 DCEPIGNPKIFSESELTAQ--KTIPSNNLPQPVRV-NNYSAPNSGTFNLQNSGTFNSQNP 156
+ + F ++ + +T+ ++ V N +A N+G ++ +S + + N
Sbjct: 109 RADMVNQTSTFLDNYFSEHPNETLKDEDITDSGNVANQTNASNAGVPDMLHSNSNLNANE 168
Query: 157 GSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNP 216
F+ N PN + PI I L+P
Sbjct: 169 RKFANEN---------------------------PNSQKTRPIF---------AIEQLSP 192
Query: 217 YQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEV 276
YQ W IKARV+ KG+++ ++N RGDGK+F+ + LD+ GEIR T FN +F EI++
Sbjct: 193 YQNVWTIKARVSYKGEIKTWHNQRGDGKLFNVNFLDT-SGEIRATAFNDFATKFNEILQE 251
Query: 277 GRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIES 336
G+VY +SK L+PA+ F +L + +E+ L+ + ++ C +E + +PK F+F + I++
Sbjct: 252 GKVYYVSKAKLQPAKPQFTNLTHPYELNLDRDTVIEECFDESN-VPKTHFNFIKLDAIQN 310
Query: 337 AENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG----DFCNK 392
E NS VDV+GI+ ++NP + + G + RR + + D SG S+ + LW DF
Sbjct: 311 QEVNSNVDVLGIIQTINPHFELTSRAGKKFDRRDITIVDDSGFSISVGLWNQQALDFNLP 370
Query: 393 EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGG 452
EG V ++K +V DF GKS+ S+ L NP+ EA+ L+ W+DS G
Sbjct: 371 EGS------------VAAIKGVRVTDFGGKSLSMGFSSTLIPNPEIPEAYALKGWYDSKG 418
Query: 453 KNAATVSISREIAAGG-AKNEIHK------TVSQIKNEGLGRSEKPDWVTVRAFITFIKS 505
+NA +++ +E GG + + K T+++ + E LGRSEK D+ +V+A I+F+K
Sbjct: 419 RNANFITLKQEPGMGGQSAASLTKFIAQRITITRAQAENLGRSEKGDFFSVKAAISFLKV 478
Query: 506 DSFCYTACPLMIGDRQCNKKV-TQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWV 564
D+F Y AC + CNKKV Q W+C++C+ ++RY+L I D+T W+
Sbjct: 479 DNFAYPAC----SNENCNKKVLEQPDGTWRCEKCDTNNARPNWRYILTISIIDETNQLWL 534
Query: 565 TAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRV 624
T F + +++LG A L LK E D F +I +S N+Y FR++ +E+ Y D+ R+
Sbjct: 535 TLFDDQAKQLLGVDANTLMSLKEE--DPNEFTKITQSIQMNEYDFRIRAREDTYNDQSRI 592
Query: 625 KITVIRADQVNYSSESRYLLDLISKSF 651
+ TV +NY +E+ YL D +SK+
Sbjct: 593 RYTVANLHSLNYRAEADYLADELSKAL 619
>gi|353239748|emb|CCA71646.1| probable Replication factor-A protein 1 [Piriformospora indica DSM
11827]
Length = 611
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 200/637 (31%), Positives = 316/637 (49%), Gaps = 74/637 (11%)
Query: 22 PLVQVMDIKLI---GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
PL+Q++ IK I G+ +R+R +ISD AM AT LN++V+ G ++ VV+L +
Sbjct: 25 PLLQLLSIKKIVNAGNVPDRHRVIISDGEQFMQAMFATTLNEKVEDGTFRRNCVVKLTKW 84
Query: 79 ICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAP 138
++ ++I+++ +ME I E IG P
Sbjct: 85 EPQDIKGQRILILFSMEAISYPEEKIGTP------------------------------- 113
Query: 139 NSGTFNLQNSGTFNSQNPGSFSTP-NSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHG 197
NPG + P NS + + + + + P P + G
Sbjct: 114 ---------------VNPGKATAPGNSDSMAVDKSSNAPSTSSSDLVPSKPVPAPAASRG 158
Query: 198 PILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGE 257
P N AP I PI LNPY +W IKARVT K + +R++N +G+G++FS +L+D + GE
Sbjct: 159 PS-GNNAP--IFPIEGLNPYHNKWTIKARVTMKSERKRWSNNKGEGQLFSVNLMD-ETGE 214
Query: 258 IRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE- 316
I+ T FNA VD Y+ E G+VY ISKG + A+K F++L ++EI +++ + V+ C +
Sbjct: 215 IKATAFNAAVDALYDRFEEGKVYYISKGRVVIAKKAFSNLTCDYEITMDSKTEVEECMDA 274
Query: 317 EDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDT 376
E D +P+ Q+SF + ++E ++ VDVI +V SV I K G +R L L D
Sbjct: 275 EADKVPQIQYSFVSLKDLEEKPKDASVDVIAVVHSVGELGSINTKQGKPLSKRDLVLADR 334
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP 436
SG S TLWG K E P+++ K KV+DF+G+S+ S+ + I+
Sbjct: 335 SGYSCRCTLWG--------KQAEQWSHNDNPIVAFKGLKVSDFNGRSLSLNSSSTMHIDV 386
Query: 437 DFAEAHELREWFDSGGKNA-----ATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKP 491
D E + LR W+ G + G K E KT+ +++ +G +KP
Sbjct: 387 DMPETNSLRGWYQKEGHKGNFNTHGGGGAGAARGSSGFKREEMKTLLEVRESEMGSRDKP 446
Query: 492 DWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLL 551
++ RA I IK ++ Y AC CNKKV +GN W C++C++ + YRYLL
Sbjct: 447 EFFNSRASIVTIKQENIAYPACMA----EGCNKKVNDTGNGWHCEKCDKTWPKPQYRYLL 502
Query: 552 QAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRL 611
Q+ D T W+ AF + EI+G A +L +K D+ F ++I Y F
Sbjct: 503 GIQVADHTAQAWLQAFNDVATEIIGMNADQLMEIKD--NDEAEFQKVIHKAQSKTYNFEC 560
Query: 612 KIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLIS 648
+ K + Y D+ RV+ VI+A +++++E+R L L+S
Sbjct: 561 RAKNDTYNDQTRVRYGVIKAYPLDFTAETRNLHKLLS 597
>gi|331228428|ref|XP_003326881.1| hypothetical protein PGTG_08418 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309305871|gb|EFP82462.1| hypothetical protein PGTG_08418 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 618
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 209/643 (32%), Positives = 333/643 (51%), Gaps = 67/643 (10%)
Query: 24 VQVMDIKLIG-----STQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
VQV+ IK +G S ER+R +ISD AMLATQLN V+ Q+KK S++++ Y
Sbjct: 26 VQVISIKSVGVSNVSSAPERWRIIISDGQMFITAMLATQLNHFVQENQIKKHSILRVPSY 85
Query: 79 ICSTVQNRKIIVVLNMETIILDC-EPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSA 137
+ + +R ++V+L +E + D E IGNP + ++E A K SN P P + N S
Sbjct: 86 TVNVIGSRHVVVLLGVEVVQSDYPERIGNP-VNCDAEANANKD-NSNTKPAPAVLANRS- 142
Query: 138 PNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHG 197
N P P+ P+ S++P + P R G
Sbjct: 143 --------------NVAPPKPDVKPDIDVKPKPS------SYKPNIPASKPNKPGVRRTG 182
Query: 198 PILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGE 257
IPIA ++P+ W IKARV+ K +++R++N+RGDGK+FS LD D G+
Sbjct: 183 ---------NHIPIAGVSPFANNWKIKARVSQKTEIKRWSNSRGDGKLFSVTFLD-DSGQ 232
Query: 258 IRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEE 317
IR T FN VD Y+ ++ G+VYLIS+G + A+K +N +++EI E T+ V+ C +
Sbjct: 233 IRATGFNDAVDNLYDSLQEGQVYLISRGKITIAKKPYNTTGHDYEIVFENTTEVEECGDS 292
Query: 318 DDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMET-QRRILNLKDT 376
D+ +SE+ E ++++DV+ ++ V I+ K +T +R + L D
Sbjct: 293 ADTPKIILNKLTKLSELNDVEKDAVIDVVAVLKDVGEISEIVSKATQKTIVKRDITLIDQ 352
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP 436
S S+ +TLWG K E + +++ + KV DF G+++ I S+ + +NP
Sbjct: 353 SAYSIRMTLWG--------KTAETFEAPTESIVAFQGVKVGDFGGRNLSMISSSVMLVNP 404
Query: 437 DFAEAHELREWFDSGGKNAATVS-------ISREIAAGGAKNEIHKTVSQIKNEGLGRSE 489
D EA +L+ W+D+ G NA S I REI KTV++IK+ LG +E
Sbjct: 405 DIPEAFDLKGWYDNEGVNAKIQSFANTGTGIGREITEDSL-----KTVAEIKDTQLGMNE 459
Query: 490 KPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSG-NRWQCDRCNQEIDECDYR 548
+ D+ RA I +IKS++ Y ACP +CNKK+ + G + W+C++C++ D+R
Sbjct: 460 RGDYFNFRATIMYIKSETISYPACPT----ERCNKKLLRDGDDEWRCEKCDKLFPAPDHR 515
Query: 549 YLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYL 608
YL+Q +QD TG W++ F E G+ IL A EL +K D+ ++ +I+ Y
Sbjct: 516 YLIQMTVQDHTGTLWLSGFNEVGQIILPMNANELIGIKE--TDEAQYQKIVTDATAKTYT 573
Query: 609 FRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSF 651
+ KEE Y D R K +V+R V++ + L + + K++
Sbjct: 574 MVCRAKEETYNDVNRTKYSVLRIAPVDWVAAGLQLAETLLKNY 616
>gi|354504939|ref|XP_003514530.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit,
partial [Cricetulus griseus]
Length = 498
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 168/443 (37%), Positives = 267/443 (60%), Gaps = 21/443 (4%)
Query: 206 ARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
++++PIA+L PYQ +W I ARVT K +R ++N+RG+GK+FS +L+D + GEIR T FN
Sbjct: 66 SKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVD-ESGEIRATAFNE 124
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQ 325
VD+F+ +IEV +VY SKG+LK A K F+ +KN++E+ ++V C E+ +P Q
Sbjct: 125 QVDKFFPLIEVNKVYYFSKGTLKIANKQFSAVKNDYEMTFNNETSVLPC-EDGHHLPTVQ 183
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELT 384
F F IS++ES +S+VD+IGI S S I ++ + E +R + L D SG+ V T
Sbjct: 184 FDFTGISDLESKSKDSLVDIIGICKSYEDSTKITVKSSNREVAKRNIYLMDMSGKVVTAT 243
Query: 385 LWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHEL 444
LWG+ +K Q PV+++K +V+DF G+S+ + S+ + +NPD EA++L
Sbjct: 244 LWGEDADKFDGSRQ--------PVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKL 295
Query: 445 REWFDSGGKNAATVSISREIAAGGA--KNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITF 502
R WFDS G+ VSIS ++ +GGA N KT+ + K+E LG+ +K D+ + A + F
Sbjct: 296 RGWFDSEGQALDGVSIS-DLRSGGAGGNNTNWKTLYEAKSENLGQGDKADYFSTVATVVF 354
Query: 503 IKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGL 561
++ ++ Y ACP + CNKKV Q ++C++C++E YR +L + D
Sbjct: 355 LRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNVADFQEN 410
Query: 562 TWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDE 621
WVT FQES E ILG Y+ + + +++ F E+ ++ F + FR+++K E Y DE
Sbjct: 411 QWVTCFQESAEAILG--QNTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDE 468
Query: 622 QRVKITVIRADQVNYSSESRYLL 644
R+K TV+ V+Y ++ L+
Sbjct: 469 SRIKATVMDVKPVDYRDYAKRLI 491
>gi|367023819|ref|XP_003661194.1| hypothetical protein MYCTH_2300304 [Myceliophthora thermophila ATCC
42464]
gi|347008462|gb|AEO55949.1| hypothetical protein MYCTH_2300304 [Myceliophthora thermophila ATCC
42464]
Length = 614
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 202/641 (31%), Positives = 334/641 (52%), Gaps = 70/641 (10%)
Query: 22 PLVQVMDIKLIGSTQ------ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQL 75
P++Q + IK + + ERYR ++SD + MLATQ N V G ++KGS+V++
Sbjct: 28 PVLQCLHIKFLENKNPGVPGPERYRIVLSDIRNYVQCMLATQANRVVHDGLLQKGSIVRV 87
Query: 76 IDYICSTVQNRKIIVVLNMETIILDCEP--IGNPKIFSESELTAQKTIPSNNLPQPVRVN 133
Y +V+ + I+++L+++ + P IG+PK+ + Q+
Sbjct: 88 KQYQAQSVKGKSILIILDLDVMTHLGTPDKIGDPKLMEAAPSEQQQ-------------- 133
Query: 134 NYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNF 193
N + +G + G+ S P + V +P VQ + +
Sbjct: 134 NTTIGGAGFYG------------GAKSEP-----------AAVHETKPQVQ---RQVASR 167
Query: 194 RNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDS 253
G A + I PI A++PY +W IK RVT+K D+R ++ +GK+FS +LLD
Sbjct: 168 TGGGGGSGGHAASTIYPIEAISPYANKWTIKVRVTSKSDIRTWHKTHSEGKLFSVNLLD- 226
Query: 254 DGGEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATSTVD 312
+ GEIR T FN VD+FY++++ G VY IS ++ A+K F++L N++E+ LE+ + ++
Sbjct: 227 ESGEIRATAFNQEVDQFYDLLQEGSVYYISTPCKVQLAKKQFSNLANDYELMLESGTVIE 286
Query: 313 LCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRIL 371
++ S+P+ +F+F I E++ E ++ VDVIG++ VN I K + +R L
Sbjct: 287 R-ADDQSSVPQVRFNFCTIQELQGVEKDATVDVIGVLKEVNELEQITSKTTQKPYDKREL 345
Query: 372 NLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQ 431
L D +G SV +T+WG K D V++ K +V+DF G+S+ + S
Sbjct: 346 TLVDDTGYSVRVTIWG--------KTAREFDASPESVIACKGTRVSDFGGRSLSLLSSGT 397
Query: 432 LFINPDFAEAHELREWFDSGGKNA--ATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSE 489
+ I+PD EAH+L+ W+++ G+N AT S + A + + K ++QIKNE LG +
Sbjct: 398 MAIDPDIPEAHKLKGWYEAQGRNNTFATHSNLSSVGAATGRKDDAKWIAQIKNENLG-VD 456
Query: 490 KPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYR 548
K D+ TV+ I ++ ++F Y ACP CNKKVT G+ W+C++CN D YR
Sbjct: 457 KTDYFTVKGTIVHMRQENFAYPACP----SESCNKKVTDMGDGTWRCEKCNITHDRPQYR 512
Query: 549 YLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYL 608
Y++ I D TG W++ F E I+G A E M++ QD F + +
Sbjct: 513 YIMSVCISDHTGNVWISCFDEQARLIMGKTADE--MMELREQDQAAFEAAFDAANCRKMS 570
Query: 609 FRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
FR + K E + ++ RV+I+V A ++Y SE+ L +LI +
Sbjct: 571 FRCRAKMETFAEQPRVRISVWNAAPLDYKSEAHRLAELIKE 611
>gi|261187451|ref|XP_002620149.1| replication factor rfa1 [Ajellomyces dermatitidis SLH14081]
gi|239594199|gb|EEQ76780.1| replication factor rfa1 [Ajellomyces dermatitidis SLH14081]
gi|239609246|gb|EEQ86233.1| replication factor rfa1 [Ajellomyces dermatitidis ER-3]
gi|327356481|gb|EGE85338.1| replication factor [Ajellomyces dermatitidis ATCC 18188]
Length = 603
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 203/639 (31%), Positives = 339/639 (53%), Gaps = 77/639 (12%)
Query: 20 SKPLVQVMDIKLIGS---TQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLI 76
++P++Q + +K + + + ER+R + SD + MLATQ N V +GQ+ +G V+L
Sbjct: 25 AEPILQCLQVKPLPAQPNSPERFRAVFSDITNYIQTMLATQANHYVTSGQLVRGCFVRLK 84
Query: 77 DYICSTVQNRKIIVVLNMETI--ILDCEP-IGNPKIFSESELTAQKTIPSNNLPQPVRVN 133
+ + V+ ++I+++L++E + + CE IG P+ + K +P+
Sbjct: 85 SFQANMVKGKRILIILDLEVLERLGICEKKIGEPQPLDAKQEEQDKALPTT--------- 135
Query: 134 NYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNF 193
+ ++G + S+ P + + +AG
Sbjct: 136 -----------ISSNGFYGSRGPQQQAPQQPAQRSSSSAG-------------------- 164
Query: 194 RNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDS 253
A A I PI AL+PY +W IKAR T K ++ ++N G+GK+FS +LLD
Sbjct: 165 ----------AHANIYPIEALSPYSHKWTIKARCTNKSAIKTWHNKNGEGKLFSVNLLD- 213
Query: 254 DGGEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATSTVD 312
D GEIR T F D Y + E G VY IS ++ A+K FN+L NE+E+ E + V+
Sbjct: 214 DSGEIRATAFKDQCDSLYGVFEEGSVYYISSPCRVQIAKKAFNNLNNEYELTFEKDTVVE 273
Query: 313 LCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRIL 371
E++D +P+ +F+F +I+ ++S E + +DVIG++ V + IL K + +R L
Sbjct: 274 KAEEQND-VPQIRFNFTNIANLQSVEAGTTIDVIGVLKDVGETSQILSKTTSKPYDKRDL 332
Query: 372 NLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQ 431
L D +G SV LT+WG+ KE + E V++ K KV+D++G+S+ + S
Sbjct: 333 TLVDNTGYSVRLTVWGNTA-KEFDSVPE-------SVVAFKGVKVSDYNGRSLSLLSSGS 384
Query: 432 LFINPDFAEAHELREWFDSGGKNAATVSI-SREIAAG-GAKNEIHKTVSQIKNEGLGRSE 489
+ ++PD +AH+L+ W+D+ G++ S S AAG G + KT+ Q+ LG SE
Sbjct: 385 MTVDPDIEDAHKLKGWYDAQGRSETFASHDSMSNAAGFGDRASSFKTIVQVHEGNLGMSE 444
Query: 490 KPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYR 548
KPD+ +V+A + +IK DS Y AC + D+ CNKKV Q N +W+C+RC+Q ++R
Sbjct: 445 KPDYFSVKATVVYIKQDSMAYPAC---LTDK-CNKKVLQDDNGQWRCERCDQSFPHPEHR 500
Query: 549 YLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYL 608
Y+L + D TG W++ F E G+ ILG A EL LK D+ + E+++ +
Sbjct: 501 YILSVNVCDHTGAMWLSCFDEVGKLILGTSANELMELKE--NDERAYEELVQKANCRAWN 558
Query: 609 FRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
F+ + K + + D+QRV+ V+ ++YS+ES L ++I
Sbjct: 559 FKCRAKMDNFQDQQRVRYQVLSVSAIDYSAESARLAEMI 597
>gi|336269529|ref|XP_003349525.1| RFA1 protein [Sordaria macrospora k-hell]
gi|380093400|emb|CCC09058.1| putative RFA1 protein [Sordaria macrospora k-hell]
Length = 610
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 197/640 (30%), Positives = 333/640 (52%), Gaps = 76/640 (11%)
Query: 22 PLVQVMDIKLIGS------TQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQL 75
P++Q + IK + S ER+R ++SD + M+ATQ N V G +++G +V+L
Sbjct: 27 PILQCLQIKTLDSKNGGAGATERFRIVLSDLKNYVQCMMATQTNHLVHDGLLQRGCIVRL 86
Query: 76 IDYICSTVQNRKIIVVLNMETI-ILDC-EPIGNPKIFSESELTAQKTIPSNNLPQPVRVN 133
Y ++ + I++VL++E I L C E +G+P+ L + P++N
Sbjct: 87 KQYQAQCLKGKNILIVLDLEVIQSLGCPEKMGDPQ-----PLGPRGAEPTHN-------- 133
Query: 134 NYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNF 193
PN G+ +G + +N + T +P Q P Q P
Sbjct: 134 ----PNLGS-----TGFYGVKNEQTQDT------------------KP--QFPRQAPSRN 164
Query: 194 RNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDS 253
+ G + I PI L+P+ +W IKARVT+K D++ ++ G+GK+FS + LD
Sbjct: 165 TSGG-----QGSNTIYPIEGLSPFSHKWTIKARVTSKSDIKTWHKPSGEGKLFSVNFLD- 218
Query: 254 DGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVD 312
+ GEIR T FN VD+FY++++ G+VY IS ++ A+K F++L N++E+ E + ++
Sbjct: 219 ESGEIRATGFNEQVDQFYDLLQEGQVYYISTPCRVQLAKKQFSNLPNDYELTFERDTQIE 278
Query: 313 LCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMET-QRRIL 371
E+ S+P+ +F+F +I E++ E ++ +DVIG++ V I+ K + +R L
Sbjct: 279 K-AEDQTSVPQVRFNFVNIQELQDVEKDATIDVIGVLKEVQEVTQIVSKTTQKPYDKREL 337
Query: 372 NLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQ 431
L D +G SV T+WG K D ++++K KV+DF G+S+ + S
Sbjct: 338 TLVDNTGYSVRCTIWG--------KTATNFDAQPESIVAMKGTKVSDFGGRSLSLLSSGT 389
Query: 432 LFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGA--KNEIHKTVSQIKNEGLGRSE 489
+ I+PD EAH L+ W+DS G+N + + GGA + + KT+SQ+K E LG E
Sbjct: 390 MAIDPDIPEAHHLKGWYDSSGRNNTFATHNNMATLGGATGRKDDTKTISQVKEENLGTGE 449
Query: 490 KPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYR 548
PD+ +++A + +IK D+F Y C CN+KVT G+ W+C++C D YR
Sbjct: 450 MPDYFSLKATVVYIKQDNFAYPGCR----SEGCNRKVTDMGDGTWRCEKCQVNHDRPQYR 505
Query: 549 YLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYL 608
Y++ + D TG W++ F ++ I+G A EL ++ D+ R +
Sbjct: 506 YIMSVNVNDHTGQLWLSCFDDTARIIMGKSADELIEMREN--DETRLAAEFEQANCRKLN 563
Query: 609 FRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLIS 648
FR + K + +G++QRV+ V+ A ++Y E L +LI+
Sbjct: 564 FRCRAKMDTFGEQQRVRYQVMSAAPLDYKMEGNKLNELIN 603
>gi|365762222|gb|EHN03823.1| Rfa1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 661
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 197/624 (31%), Positives = 327/624 (52%), Gaps = 67/624 (10%)
Query: 42 LISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRK--IIVVLNMETIIL 99
+ISD V A+L Q + ++ ++++G ++++I + V+ RK +++V + E +
Sbjct: 89 MISDGVYHMKALLRNQAASKFQSMELQRGDIIRVIIAEPAIVRERKKYVLLVDDFELVQS 148
Query: 100 DCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSF 159
E + F ++ + + P+ L +N + N N+ N G + + S
Sbjct: 149 RAEMVNQASTFLDNYFSER---PNETLKDEDISDNGNVTNQT--NIGNLGVGDMLHSNSN 203
Query: 160 STPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQG 219
N F N GS + +P I I L+PYQ
Sbjct: 204 LNANEKKF--VNEGSNSQKSRP--------------------------IFAIEQLSPYQN 235
Query: 220 RWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRV 279
W IKARV+ KG+++ ++N RGDGK+F+ + LD+ GEIR T FN +F EI++ G+V
Sbjct: 236 VWTIKARVSYKGEIKTWHNQRGDGKLFNVNFLDT-SGEIRATAFNDFATKFNEILQEGKV 294
Query: 280 YLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAEN 339
Y +SK L+PA+ F +L + +E+ L+ + V+ C +E + +PK F+F + I++ E
Sbjct: 295 YYVSKAKLQPAKPQFTNLTHPYELNLDRDTVVEECFDESN-VPKTHFNFIKLDAIQNQEV 353
Query: 340 NSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG----DFCNKEGQ 395
NS VDV+GI+ ++NP + + G + RR + + D SG S+ + LW DF EG
Sbjct: 354 NSNVDVLGIIQTINPQFELTSRAGKKFDRRDITIVDDSGFSISVGLWNQQALDFNLPEGS 413
Query: 396 KLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNA 455
V ++K +V DF GKS+ S+ L NP+ EA+ L+ W+DS G+NA
Sbjct: 414 ------------VAAIKGVRVTDFGGKSLSMGFSSTLIPNPEIPEAYALKGWYDSKGRNA 461
Query: 456 ATVSISREIAAGG-AKNEIHK------TVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSF 508
++ +E GG + + K T+++ + E LGRSEK D+ +V+A I+F+K D+F
Sbjct: 462 NFTTLKQEPGVGGQSAASLTKFIAQRITIARAQAENLGRSEKGDFFSVKAAISFLKVDNF 521
Query: 509 CYTACPLMIGDRQCNKKV-TQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAF 567
Y AC + CNKKV Q W+C++C+ ++RY+L I D+T W+T F
Sbjct: 522 AYPAC----SNENCNKKVLEQPDGTWRCEKCDTNNASPNWRYILTISIIDETNQLWLTLF 577
Query: 568 QESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKIT 627
+ +++LG A L LK E D F +I +S N+Y FR++ +E+ Y D+ R++ T
Sbjct: 578 DDQAKQLLGVDANTLMSLKEE--DPNEFTKITQSIQMNEYDFRIRAREDTYNDQSRIRYT 635
Query: 628 VIRADQVNYSSESRYLLDLISKSF 651
V +NY +E+ YL D +SK+
Sbjct: 636 VANLHSLNYKAEADYLADELSKAL 659
>gi|403416914|emb|CCM03614.1| predicted protein [Fibroporia radiculosa]
Length = 609
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 202/652 (30%), Positives = 328/652 (50%), Gaps = 80/652 (12%)
Query: 15 GGD---VNSKPLVQVMDIKLI------GSTQERYRFLISDSVSTQHAMLATQLNDRVKTG 65
GGD N +P VQ + K + +T +RYR +ISD AMLATQLN V+
Sbjct: 18 GGDDELFNMRPTVQFLSFKKVVPAPGSSATVDRYRVIISDGEHFLQAMLATQLNHLVEDE 77
Query: 66 QVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPK-IFSESELTAQKTIPSN 124
++ K S+ + + C+ VQ+++++++L+++ + D IGNP I S S A +P
Sbjct: 78 KITKHSIATIEKFTCNLVQDKRLLIILSLQIVAKDSSKIGNPTPIQSPSGPNAAGALPQK 137
Query: 125 NLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQ 184
+AP + T + T R P A Q
Sbjct: 138 -----------TAPAASTSTM--------------------TARPPPAAL-------AQQ 159
Query: 185 PPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGK 244
PP Q N RN + PI +L+PYQ W IKARV+ K D++ ++N RG+GK
Sbjct: 160 PPRQQTRNGRN-----------TVYPIESLSPYQNHWMIKARVSQKSDVKTWSNQRGEGK 208
Query: 245 VFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIF 304
+FS L+D + GEI+ T FN VD Y+ + G+VY +SK + A+K F++++NE+E+
Sbjct: 209 LFSVTLMD-ETGEIKGTGFNNAVDELYDKFQEGKVYFVSKARVNLAKKKFSNVQNEYELT 267
Query: 305 LEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGM 364
E + V+ C + ++P +++F I ++ +S+ DVIG+V V I K
Sbjct: 268 FERNTEVEEC-HDVTNVPTVRYNFVDIGKLSEITKDSVCDVIGVVKDVGQLGEITSKTTN 326
Query: 365 ET-QRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS 423
+T +R L L D SG SV LTLWG K E PV++ K KV DF G++
Sbjct: 327 KTVSKRDLTLVDRSGFSVRLTLWG--------KQAETFVAEDQPVIAFKGVKVGDFGGRT 378
Query: 424 IGTIPSTQLFINPDFAEAHELREWFDSGGKN---AATVSISREIAAGGAKNEIHKT--VS 478
+ S+ + +NPD +AH LR WFD+ G + A S + E + V+
Sbjct: 379 LSMFSSSTMQVNPDIPDAHALRGWFDAAGVDQNYQAQSSSGGGGGGSYGQFERAEILPVN 438
Query: 479 QIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRC 538
+K +G S+KPD+ RA I +K+++ Y AC CNKKV + + W+C+RC
Sbjct: 439 TVKEREMGMSDKPDFFLCRATIMHLKTENIAYPACHT----DGCNKKVIEGHDGWRCERC 494
Query: 539 NQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEI 598
++ ++ YRY++ D +G W+ F ++G+ I + + +++ + +DDV F +I
Sbjct: 495 DRSWEKPQYRYIVSLAAADYSGQAWLQGFNDAGQVIFDSKSAD-EVVEVKDRDDVAFNKI 553
Query: 599 IRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
+ + Y F + K+E + D R++ ++ R V+Y E YL +L+ +S
Sbjct: 554 VEQAMGKTYNFVCRAKQETFNDSTRIRYSIQRILPVSYKEEGAYLANLLRRS 605
>gi|452981313|gb|EME81073.1| hypothetical protein MYCFIDRAFT_29007 [Pseudocercospora fijiensis
CIRAD86]
Length = 621
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 201/659 (30%), Positives = 353/659 (53%), Gaps = 73/659 (11%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLI----GSTQERYRFLISDSVSTQHAMLATQLND 60
+T ++ I G+ P++Q + IK + G T ER+R + +D+V+ ML++Q N
Sbjct: 8 ITHGALRQITEGNPVENPILQCVQIKPMAQGAGGT-ERWRVVFNDTVNFIQGMLSSQSNH 66
Query: 61 RVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQ 118
+ G +KKGSV +L Y + V+++ I++++N++ + + + +G+P ++ AQ
Sbjct: 67 LITDGHLKKGSVCRLTQYQANFVKDKHILIIMNLDVLHEYGEQDKLGSPVALDAAKPEAQ 126
Query: 119 KTIPSNNLPQPVRV--NNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIV 176
+ + PQP + NN+ + + Q S P S T A + G+
Sbjct: 127 EDVK----PQPGNIAGNNF-------YGQKPQQAQLQQQQQQRSLP-SRTNGASHGGA-- 172
Query: 177 RSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRY 236
HG I PI A++PYQ +W IKAR T+KGD++ +
Sbjct: 173 -------------------HG---------NITPIEAVSPYQHKWTIKARCTSKGDIKTW 204
Query: 237 NNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFN 295
+N G+GK+FS + LD + EIR T FN D++Y++++ G VY IS ++ A+K F+
Sbjct: 205 HNKNGEGKLFSANFLD-ETSEIRATMFNEQCDQWYDVLQEGSVYYISSPCKVQLAKKQFS 263
Query: 296 HLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPS 355
+L N++E+ E + V+ +D+ +P+ ++SF ++ +++ E +++ DVIG++ V
Sbjct: 264 NLPNDYELTFERDTQVE--KADDEGVPQVKYSFTNLESLQNVEKDTVTDVIGVLADVGEV 321
Query: 356 VPILRKNGME-TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSG 414
I+ K + +R L L D +G +V LT+WG K+ E D V++ K
Sbjct: 322 NEIVSKTTSKPYSKRELTLVDDTGYNVRLTIWG--------KVAESFDASPEAVVAFKGV 373
Query: 415 KVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIA-----AGGA 469
KV+DF G+S+ + S + I+PD EA++L+ W+ + G S + +A +GG
Sbjct: 374 KVSDFGGRSLSLLSSGSMNIDPDIDEAYKLKGWYQANGSTTQFASHANTMATVGATSGGR 433
Query: 470 KNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQS 529
K++ KT+ Q+++E LG ++ DW T++A I +IK D+F Y AC + CNKKVT+
Sbjct: 434 KDDT-KTIQQVRDENLGMTDATDWFTLKATIVYIKQDNFAYAACQ-TTDPQPCNKKVTEV 491
Query: 530 GN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYE 588
N W+C++C + D YRY++ + D TG W++ F + G+ +LG PA EL M+ E
Sbjct: 492 DNGSWRCEKCEKNWDAPKYRYIMSVNVSDHTGQLWLSCFDDVGQAMLGMPANEL-MVAKE 550
Query: 589 LQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
D+ R + ++F+ + K + Y D+QRV+ V A+ +++ ES+ L D+I
Sbjct: 551 EGDEKRVTDAFADANCKSFVFKCRCKMDNYQDQQRVRYQVQYANNIDFVRESKRLADII 609
>gi|401626961|gb|EJS44874.1| rfa1p [Saccharomyces arboricola H-6]
Length = 621
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 192/622 (30%), Positives = 323/622 (51%), Gaps = 67/622 (10%)
Query: 42 LISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRK--IIVVLNMETIIL 99
+ISD V A+L Q + ++ ++++G +++++ + V+ RK +++V + E +
Sbjct: 49 MISDGVYHMKALLRNQAASKFQSMELQRGDIIRVMIAEPAIVRERKKYVLLVDDFELVQS 108
Query: 100 DCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSF 159
E + F ++ + SN + + + NS N NPG+
Sbjct: 109 RAEMVNQASTFLDNYFSEH----SNETLKDEDITD------------NSSATNQTNPGNV 152
Query: 160 STPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQG 219
P+ N + + F + P I I L+PYQ
Sbjct: 153 GLPDM-LHSNSNLNASEKKFHNESSSSQKSKP----------------IFAIEQLSPYQN 195
Query: 220 RWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRV 279
W IKARV+ KG+++ ++N RGDGK+F+ + LD+ GEIR T FN +F EI++ G+V
Sbjct: 196 VWTIKARVSYKGEIKTWHNQRGDGKLFNVNFLDT-SGEIRATAFNDFATKFNEILQEGKV 254
Query: 280 YLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAEN 339
Y +SK L+PA+ F +L + +E+ L+ + V+ C +E + +PK F+F + I++ E
Sbjct: 255 YYVSKAKLQPAKPQFTNLTHPYELNLDRDTVVEECFDESN-VPKTHFNFIKLDAIQNQEV 313
Query: 340 NSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG----DFCNKEGQ 395
NS VDV+G++ ++NP + + G + RR + + D SG S+ + LW DF EG
Sbjct: 314 NSNVDVLGVIQTINPHFELTSRAGKKFDRRDITIVDDSGFSISVGLWNQQALDFNLPEG- 372
Query: 396 KLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNA 455
V ++K +V DF GKS+ S+ L NP+ EA+ L+ W+DS G+NA
Sbjct: 373 -----------SVAAIKGVRVTDFGGKSLSMGFSSTLIPNPEIPEAYALKGWYDSKGRNA 421
Query: 456 ATVSISREIAAGG-AKNEIHK------TVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSF 508
++ +E GG + + K T+++ + E LGRSEK D+ +V+A ++F+K D+F
Sbjct: 422 NFTTLKQEPGMGGQSAAGLTKFIAQRITIARAQAENLGRSEKGDFFSVKAAVSFLKVDNF 481
Query: 509 CYTACPLMIGDRQCNKKV-TQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAF 567
Y AC + CNKKV Q W+C++C+ ++RY+L I D+T W+T F
Sbjct: 482 AYPAC----SNENCNKKVLEQPDGTWRCEKCDTNNASPNWRYILTISIIDETNQLWLTLF 537
Query: 568 QESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKIT 627
+ +++LG A L LK E D F +I +S N+Y FR++ +E+ Y D+ R++ T
Sbjct: 538 DDQAKQLLGVDANALMSLKEE--DPNEFTKITQSIQMNEYDFRIRAREDTYNDQSRIRYT 595
Query: 628 VIRADQVNYSSESRYLLDLISK 649
V +NY +E+ YL D +SK
Sbjct: 596 VANLHSLNYKAEADYLADELSK 617
>gi|449525283|ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Cucumis sativus]
Length = 560
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/499 (34%), Positives = 282/499 (56%), Gaps = 25/499 (5%)
Query: 161 TPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGR 220
T +GT P + +S V N P + R+ P+ LNPY G
Sbjct: 73 TEEAGTILKPKQELVAKSAAQIVHEQRM------NMAPAARMSMTRRVQPLVYLNPYLGD 126
Query: 221 WAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
W IK RVT KG+LR Y NA+G+G VF+ L D DG +I+ T FN +FYE +G+VY
Sbjct: 127 WTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKFYEKFSLGKVY 186
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENN 340
+S+G+LK A K F ++N++E+ L S VD + E +P+ +++F I + N
Sbjct: 187 YVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVKIDMLGPHVNG 246
Query: 341 -SIVDVIGIVISVNPSVPILRKNGMETQ-RRILNLKDTSGRSVELTLWGDFCNKEGQKLQ 398
+VDVIG+V +V+ ++ I RK ET +R + + D + ++V ++LW D GQ+L
Sbjct: 247 RDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELL 306
Query: 399 EMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGK---NA 455
++ D P++++K +V DF G S+ TI + + INPD EAH+LR W+DS GK +
Sbjct: 307 DIADQS--PIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDSEGKAVSMS 364
Query: 456 ATVSISREIAAGGAKNEIHKTVSQ---IKNEGLGRSEKPDWVTVRAFITFIKSD-SFCYT 511
+ S G+++ +S ++N+ LG EKP + ++RA+++FIK D + Y
Sbjct: 365 SVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGE-EKPTFFSIRAYVSFIKPDQTMWYR 423
Query: 512 ACPLMIGDRQCNKKVTQS-GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQES 570
AC + CNKKVT++ G+ + CD C + +EC RY++ ++ D +G WV+ F E
Sbjct: 424 AC------KTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEE 477
Query: 571 GEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIR 630
E I+GC A EL LK ++ ++ + ++ + +LFR+ + + Y +E+R +ITV
Sbjct: 478 AERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRS 537
Query: 631 ADQVNYSSESRYLLDLISK 649
V++++ESR+LL+ I+K
Sbjct: 538 VAPVDFAAESRFLLEEIAK 556
>gi|169852738|ref|XP_001833051.1| replication factor-A protein 1 [Coprinopsis cinerea okayama7#130]
gi|116505845|gb|EAU88740.1| replication factor-A protein 1 [Coprinopsis cinerea okayama7#130]
Length = 604
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 191/641 (29%), Positives = 314/641 (48%), Gaps = 80/641 (12%)
Query: 24 VQVMDIKLIGSTQ-------ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLI 76
+Q + IK + + +RYR +ISD V AMLATQLN+ V+ + K +V +
Sbjct: 33 IQFLSIKKVNTANPNSNAPVDRYRIIISDGVHFIQAMLATQLNELVQNNSIGKHTVAVVE 92
Query: 77 DYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYS 136
C+ VQ +++IVVL + + + IG+P+ A + PQ V
Sbjct: 93 RATCNYVQEKRLIVVLELRVVAHLPDKIGDPQQLGPDSKRALDSASVTPAPQSV------ 146
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNH 196
+ S P++ T AP +P P +
Sbjct: 147 ---------------------ATSGPSTSTKTAPA--------KPATTGPQRG------- 170
Query: 197 GPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGG 256
+ PI L+PYQ W IKARVT K ++++++NA+G+GK+F+ +D D G
Sbjct: 171 -----------VYPIEGLSPYQNNWTIKARVTQKSEMKQWSNAQGEGKLFNVTFMD-DSG 218
Query: 257 EIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE 316
EIR T FN V D Y +E G+VY +SK + A+K F+++ N++E+ LE + ++ C
Sbjct: 219 EIRATAFNLVADDLYPKLEEGKVYYVSKARVGLAKKKFSNIPNDYELSLERNTEIEEC-H 277
Query: 317 EDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKD 375
E ++P +++F ++ +++ ++I DVIG+V V I R N + +R L L D
Sbjct: 278 ETTNLPTIKYNFVPLNGLDALAKDAICDVIGVVKDVGEVGTITSRSNNRQISKRDLTLVD 337
Query: 376 TSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFIN 435
S SV +TLWG K E V +++ K +V DF+G+++ ++ + +N
Sbjct: 338 KSAYSVRMTLWG--------KQAEQFKVEPESIIAFKGVRVGDFNGRNLSMTSASTMQVN 389
Query: 436 PDFAEAHELREWFDSGGKNAATVSISREIAAG---GAKNEIHKTVSQIKNEGLGRSEKPD 492
PD E LR W+DS G+ + S G G + + +T+ +K G G+S+KPD
Sbjct: 390 PDIEECFTLRGWYDSQGQTQTFQAQSSNNLGGTSLGFRRDEARTLEDVKQAGFGQSDKPD 449
Query: 493 WVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQ 552
+ + RA I IK D+ Y ACP + CNKKV + + W+C++C + + +YRY++
Sbjct: 450 YFSTRATIIHIKDDNIAYPACPT----QGCNKKVIEEADGWRCEKCEKVFEAPEYRYIMS 505
Query: 553 AQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLK 612
+ D TG W F E G + G A +L +K D ++ I N Y F +
Sbjct: 506 MMVADHTGKAWFQGFNEVGVTVYGMSANDLVQIKN--NDHAQYKAIQYHAACNTYNFSCR 563
Query: 613 IKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSFRK 653
KE+ + +RV+ + R +V+Y E+ YL DL+ S+ +
Sbjct: 564 AKEDEFNGVRRVRFGISRLAKVDYKEEAGYLRDLLYSSWAR 604
>gi|302799733|ref|XP_002981625.1| hypothetical protein SELMODRAFT_114787 [Selaginella moellendorffii]
gi|300150791|gb|EFJ17440.1| hypothetical protein SELMODRAFT_114787 [Selaginella moellendorffii]
Length = 566
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 195/624 (31%), Positives = 321/624 (51%), Gaps = 87/624 (13%)
Query: 42 LISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDC 101
++SD AML T ++ V+ G+++ +++++ + S + N + N I+ DC
Sbjct: 1 MLSDGSMKAKAMLPTHMSAEVEAGKIQHLGLIRVLSHTTSVIPN-----LPNKALIVTDC 55
Query: 102 EPIGNP---KIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGS 158
E + ++ SES +AQKT + P
Sbjct: 56 EVVSGALDREVGSESSSSAQKTQ------------------------------CDEKPKF 85
Query: 159 FSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHG---PILKNEAPARIIPIAALN 215
S P V+S VQ HG P + R+ P+ +L
Sbjct: 86 LSAP-------------VKSAAQIVQ---------EEHGRAAPAARMGVSRRVYPLVSLT 123
Query: 216 PYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIE 275
PYQG W IK RVT+KG LR Y NARG+G VF+ +L D DG +I+ T F ++FY + E
Sbjct: 124 PYQGSWTIKVRVTSKGPLRTYRNARGEGSVFNVELTDEDGTQIQATMFKEAAEKFYPMFE 183
Query: 276 VGR-------VYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDS---IPKQQ 325
+G+ VY +S G+L+ A + F+ +KN++E+ L A+S V+ TE D IP +
Sbjct: 184 LGKATSFLYQVYYVSNGNLRMANRQFSAVKNDYEMTLNASSGVEEVTEPDGKPGVIPLVK 243
Query: 326 FSFRHISEIESAENN-SIVDVIGIVISVNPSVPILRK-NGMETQRRILNLKDTSGRSVEL 383
++F I ++ + N + D IGIV SV+ ++ + RK + E +R + L D S ++V +
Sbjct: 244 YNFVKIEDLAAYVNKRELFDAIGIVQSVSSTMSVRRKVDNTEFAKREIVLVDQSQKTVAV 303
Query: 384 TLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDF-SGKSIGTIPSTQLFINPDFAEAH 442
+LW ++G KL EM+ PV+ ++S + NDF +G S+ T P++ ++INPD EA
Sbjct: 304 SLWSSLAVEDGAKLLEMLPDA--PVVVIRSVRANDFQAGVSLSTSPNSMVWINPDIPEAR 361
Query: 443 ELREWFDSGGKNAATVSISREIAA-GGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFIT 501
ELR W+D GK+A S+ ++ G+ N+ +S I +G K + TVRA I+
Sbjct: 362 ELRSWYDESGKDATLTSVGAGLSQRAGSANDNRADISDITAPSVGEG-KAAYFTVRACIS 420
Query: 502 FIKSD-SFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTG 560
+IK D + YTAC CN+KV++ +R+ C+ C + D RY++ A++ D +G
Sbjct: 421 YIKPDQTMWYTACS------TCNRKVSEDSSRFWCEACQRHFDTASRRYIMLAKLTDHSG 474
Query: 561 LTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGD 620
WV+ F + E+ILG A EL +K + D ++ + V++ Y+FR+ + + Y
Sbjct: 475 DAWVSFFNDQAEQILGVSADELATIKSQDDDQRQYSSQLSKVVWSSYVFRVSVAQTEYLG 534
Query: 621 EQRVKITVIRADQVNYSSESRYLL 644
E+R +IT+ + +++SESR LL
Sbjct: 535 EKRQRITIRAVNDTDWASESRLLL 558
>gi|302690362|ref|XP_003034860.1| hypothetical protein SCHCODRAFT_50382 [Schizophyllum commune H4-8]
gi|300108556|gb|EFI99957.1| hypothetical protein SCHCODRAFT_50382 [Schizophyllum commune H4-8]
Length = 628
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 205/620 (33%), Positives = 324/620 (52%), Gaps = 58/620 (9%)
Query: 37 ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMET 96
ER R ++SD AMLATQLND ++K S+V++ + VQNR++++VL +E
Sbjct: 58 ERLRIILSDGEWFMQAMLATQLNDV----GIEKNSIVRISRASRNIVQNRRLVIVLGLE- 112
Query: 97 IILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNP 156
I+ C+ K+ + N+ QP Y+ P S ++ G N Q+P
Sbjct: 113 IVQHCDE----KLRRDP----------NDEKQP-----YTLP-SEYLKVKPDGE-NGQSP 151
Query: 157 GSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNP 216
S P + AP+ ++ R+ P Q P QP + +N P ++ I PI L+P
Sbjct: 152 APQSKPAA----APSTSTVPRTATP--QLPAQPHRDSKNTAPNGRS-----IYPIEGLSP 200
Query: 217 YQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEV 276
YQ W IKARVT K D+RR++N RG+G++F+ L+D D GEIR T FN VD Y+ E
Sbjct: 201 YQNNWTIKARVTQKSDIRRWSNQRGEGRLFNVTLMD-DTGEIRATGFNQAVDELYDKFEE 259
Query: 277 GRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIES 336
G+VY +SK + A+K F+++ N++E+ LE ++ V+ C E D +P +++F + ++
Sbjct: 260 GKVYYVSKARVNLAKKKFSNVNNDYELSLERSTEVEPCLEAAD-VPTIKYNFVKLDALQE 318
Query: 337 AENNSIVDVIGIVISVNPSVPILRKNGMET-QRRILNLKDTSGRSVELTLWGDFCNKEGQ 395
+S DVIG+V V I K T ++R L L D +G SV +TLWG+ K +
Sbjct: 319 VPKDSNCDVIGVVKEVGELSEITTKTTNRTMKKRELTLVDDTGYSVRVTLWGNTAEKYEE 378
Query: 396 KLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKN- 454
+ PV++ K KV DF G+S+ + S+ +F+NPD EA LR WFD GK
Sbjct: 379 EGH--------PVIAFKGVKVGDFGGRSLSMLMSSMMFVNPDTTEAFHLRGWFDDDGKTL 430
Query: 455 --AATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTA 512
++ S G + +T+ +IKN LG ++PD+ + RA I IK ++F Y A
Sbjct: 431 QFSSHTSGGGAGTGRGFDRDDQRTLMEIKNANLGMGDQPDYFSSRATIMHIKDNNFAYPA 490
Query: 513 CPLMIGDRQCNKKVTQSG-NRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESG 571
C CNKKV ++G W+C++CN DYR++LQ + D G W F ++G
Sbjct: 491 C----RSPDCNKKVVENGPGEWRCEKCNVSHSSPDYRFMLQLAVADLHGQAWFQGFNDAG 546
Query: 572 EEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRA 631
+ I A E+ +K DD F + + F + K + + DE RV+ + +
Sbjct: 547 QVIFNRSANEIMQMKS--GDDDGFLRAFAQANYQAFNFNCRAKADTWNDETRVRYGITKV 604
Query: 632 DQVNYSSESRYLLDLISKSF 651
+ V++ E++Y+ D + +
Sbjct: 605 EPVDFVKEAQYMRDKLQSEW 624
>gi|85102469|ref|XP_961333.1| replication factor-A protein 1 [Neurospora crassa OR74A]
gi|18376393|emb|CAD21282.1| probable single-stranded DNA-binding protein 68k chain [Neurospora
crassa]
gi|28922877|gb|EAA32097.1| replication factor-A protein 1 [Neurospora crassa OR74A]
gi|336473157|gb|EGO61317.1| hypothetical protein NEUTE1DRAFT_144541 [Neurospora tetrasperma
FGSC 2508]
gi|350293584|gb|EGZ74669.1| putative single-stranded DNA-binding protein 68k chain [Neurospora
tetrasperma FGSC 2509]
Length = 610
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 196/638 (30%), Positives = 328/638 (51%), Gaps = 72/638 (11%)
Query: 22 PLVQVMDIKLIGS------TQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQL 75
P++Q + IK + S ER+R ++SD + M+ATQ N V G +++G +V+L
Sbjct: 27 PILQCLQIKTLDSKNGGAGATERFRIVLSDLKNYVQCMMATQTNHLVHDGLLQRGCIVRL 86
Query: 76 IDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNY 135
Y ++ + I++VL++E I + +G P+ + PQP+
Sbjct: 87 KQYQAQCLKGKNILIVLDLEVI----QSLGCPEKMGD--------------PQPL----- 123
Query: 136 SAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRN 195
P S QNP ST G P + +P Q P Q P +
Sbjct: 124 -GPRSAE---------PQQNPNLGSTGFYGVKSEP-----TQDTKP--QFPRQMPSRNAS 166
Query: 196 HGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDG 255
G + + I PI L+P+ +W IKARVT+K D++ ++ A G+GK+FS + LD +
Sbjct: 167 GG-----QGSSTIYPIEGLSPFSHKWTIKARVTSKSDIKTWHKASGEGKLFSVNFLD-ES 220
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVDLC 314
GEIR T FN VD+FY++++ G+VY IS ++ A+K +++L N++E+ E + ++
Sbjct: 221 GEIRATGFNDQVDQFYDLLQEGQVYYISTPCRVQLAKKQWSNLPNDYELTFERDTVIEK- 279
Query: 315 TEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMET-QRRILNL 373
E+ S+P+ +F+F +I E++ E ++ VD+IG++ V I+ K + +R L L
Sbjct: 280 AEDQTSVPQVRFNFVNIQELQDVERDATVDIIGVLKEVQEVTQIVSKTTQKPYDKRELTL 339
Query: 374 KDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF 433
D +G SV T+WG K D +++ K KV+DF G+S+ + S +
Sbjct: 340 VDNTGYSVRCTIWG--------KTATNFDAQPESIVAFKGTKVSDFGGRSLSLLSSGTMA 391
Query: 434 INPDFAEAHELREWFDSGGKNAATVSISREIAAGGA--KNEIHKTVSQIKNEGLGRSEKP 491
I+PD EAH L+ W+DS G+N + + GGA + + KT+SQ+K E LG +E P
Sbjct: 392 IDPDIPEAHHLKGWYDSSGRNNTFATHNNMQTLGGATGRKDDAKTISQVKEENLGTNEAP 451
Query: 492 DWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYL 550
D+ ++A + FIK D+F Y C CN+KVT G+ W+C++C D YRY+
Sbjct: 452 DYFALKATVVFIKQDNFAYPGCR----SEGCNRKVTDMGDGTWRCEKCQINHDRPQYRYI 507
Query: 551 LQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFR 610
+ + D TG W++ F ++ I+G A EL ++ D+ R + FR
Sbjct: 508 MSVNVNDHTGQLWLSCFDDTARVIMGKSADELMEIRET--DETRLPAEFEQANCRKLNFR 565
Query: 611 LKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLIS 648
+ K + +G++QR++ V+ ++Y E L +LI+
Sbjct: 566 CRAKMDTFGEQQRIRYQVMSVAPLDYKMEGNKLNELIN 603
>gi|390597691|gb|EIN07090.1| replication factor-a protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 621
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 202/646 (31%), Positives = 324/646 (50%), Gaps = 76/646 (11%)
Query: 20 SKPLVQVMDIKLIGST-------QERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSV 72
S P VQ + IK I T +RYR ++SD AMLATQLN ++ + K S+
Sbjct: 26 SCPTVQFLSIKKISPTGPPGANAPDRYRIIMSDGEHFVQAMLATQLNHLIEDETIGKHSI 85
Query: 73 VQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRV 132
V L + + VQ R++I++L++ ++ E IG+P + S+ QP
Sbjct: 86 VVLDRFTANVVQERRLIIILDLTPVLKIAEKIGDPSAITLSD-------------QP--- 129
Query: 133 NNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPN 192
T + P + + P RA +A S+ + P P P N
Sbjct: 130 -----------------TTDGDVPMAETAPTPAPARA-SAPSVSNTVPPRSAPQRSTPGN 171
Query: 193 FRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLD 252
++ G + I+PI L+PYQ W IKARVT K D+R ++N RG+GK+F+ L+D
Sbjct: 172 -KSGG------RQSAILPIEGLSPYQNNWTIKARVTQKSDIRTWSNQRGEGKLFNVTLMD 224
Query: 253 SDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVD 312
+ GEIR T FN VVD YE + G+VY IS+ + A+K F++L N++E+ E + V+
Sbjct: 225 -ESGEIRGTGFNDVVDALYEKFQEGKVYFISRARVNLAKKKFSNLANDYELSFERNTEVE 283
Query: 313 LCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGM-ETQRRIL 371
C + +P ++ F ++E+E E +S DV+G+V I+ K E +R L
Sbjct: 284 ECLDP-SGVPAVKYEFTPLAELEQKEKDSTCDVLGVVKEDGGVATIVSKTTHKELLKREL 342
Query: 372 NLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQ 431
L D+SG SV LTLWG K E + PV++ K +V DF G+S+ + S+
Sbjct: 343 TLVDSSGYSVRLTLWG--------KQAEAWNHTDNPVVAFKGVRVGDFGGRSLSMVSSST 394
Query: 432 LFINPDFAEAHELREWFDSGGKNAATVSIS--------REIAAGGAKNEIHKTVSQIKNE 483
+ I PD E H LR W+D G + + S S + + E+ KT+ +I++
Sbjct: 395 MQIEPDIPEVHHLRGWYDGVGNSQSFQSHSFLSGGAGGAGMGGTFNRAEV-KTLGEIRDL 453
Query: 484 GLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEI 542
LG S++PD +A + ++ ++ Y ACP CNKKV Q RW+C++C++
Sbjct: 454 QLGSSDRPDNFFAQATVMHVRGENIAYPACP----KEGCNKKVVQIPDGRWRCEKCDESY 509
Query: 543 DECDYRYLLQAQIQDQTGLTWVTAFQESGEEIL-GCPAKELYMLKYELQDDVRFGEIIRS 601
D +YRY++ + D TG W F + G + A EL +K +D+ +F I+
Sbjct: 510 DAPEYRYIVSMAVADHTGQAWFQGFNDVGLAVFNNMSATELVQIKE--RDEAKFNGILHK 567
Query: 602 RVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
+ F + K++ +GD RV+ + R ++Y++++ YL DL+
Sbjct: 568 AGCQTFNFSCRAKQDTFGDSTRVRYGISRITPLDYAADAAYLRDLL 613
>gi|403214488|emb|CCK68989.1| hypothetical protein KNAG_0B05560 [Kazachstania naganishii CBS
8797]
Length = 633
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 193/628 (30%), Positives = 341/628 (54%), Gaps = 47/628 (7%)
Query: 34 STQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLN 93
ST + L+SD V + + D+ ++ +++KG +V++ +++N+ VVL
Sbjct: 41 STNRKNIVLMSDGVYYMKMLFRNEAADKFQSQELQKGDIVRITAADAVSLKNKTRFVVLV 100
Query: 94 METIILDC-EPIGNP-KIFSESELTAQ--KTIPSNNLPQPVRVNNYSAPNSGTFNLQNSG 149
+ ++D + + NP F + + A + +P + +A NS T + SG
Sbjct: 101 DDFELVDAGKELVNPNSTFLNTYMAAHINELVPELKGDDEANDAHPAAENSTTTGI--SG 158
Query: 150 TFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARII 209
T + + S NS T ++ +P P +F N + I
Sbjct: 159 TATNSGAAAASATNSMTGQSD-------------RPLGNPATSFGN------SSKSKPIF 199
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
I L+PYQ W IKARV+ KG+++ ++N RG+GK+F+ + LD+ GEIR T FN + +
Sbjct: 200 AIEQLSPYQNVWTIKARVSFKGEIKTWSNQRGEGKLFNVNFLDT-SGEIRATAFNDMATK 258
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFR 329
+YEI++ G+VY +SK L+PA+ F++L + +E+ L+ S V+ C ++D ++PK F+F
Sbjct: 259 YYEILQEGKVYYVSKARLQPAKPQFSNLSHPYELSLDRESVVEEC-QDDINVPKTHFNFI 317
Query: 330 HISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDF 389
+ +++ E NS VDV+GI+ +VN + + + G RR + L D S S+ + LW
Sbjct: 318 KLDTVQNQEANSTVDVLGIIKTVNDAFTLTSRAGKTFDRRDIVLVDDSNSSINVGLW--- 374
Query: 390 CNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFD 449
L + ++ V+++K +V+DF GKS+ ++ L NP+ EA+ L+ W+D
Sbjct: 375 -----NTLAKEFNMPEGSVVAIKGVRVSDFGGKSLTMGFTSNLIPNPEIPEAYALKGWYD 429
Query: 450 SGGKNAATVSISREIAAGGAKNE---IHKTVSQIK--NEGLGRSEKPDWVTVRAFITFIK 504
S G +A ++ ++ G + N I + +S K + LG+S+ D+ ++RA I+F+K
Sbjct: 430 SEGHSANFTALGQDNVPGASPNAGKFIAQRISIGKAIADNLGKSDAGDYFSIRAAISFLK 489
Query: 505 SDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTW 563
D+F Y AC ++ CNKK QS + W+C++CN + ++ ++RY+L I D+TG W
Sbjct: 490 VDNFAYPAC----SNKDCNKKAIQSTDGTWRCEKCNTDNEKPEWRYILTLSIMDETGQLW 545
Query: 564 VTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQR 623
V F E E++LG A +L LK +D F + ++ NQY FR++ +E+ Y D+ R
Sbjct: 546 VVLFNEQAEQLLGVSATKLTDLKE--KDPKEFSRLTQNLQMNQYDFRIRAREDNYNDQTR 603
Query: 624 VKITVIRADQVNYSSESRYLLDLISKSF 651
++ +V Q+NY +E+ +L +SK+F
Sbjct: 604 IRYSVSNIHQLNYKAEADFLAAELSKAF 631
>gi|449299904|gb|EMC95917.1| hypothetical protein BAUCODRAFT_71964 [Baudoinia compniacensis UAMH
10762]
Length = 613
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 204/660 (30%), Positives = 350/660 (53%), Gaps = 76/660 (11%)
Query: 2 PVN-LTPNSISLINGGDVNSKPLVQVMDIKLIGSTQ--ERYRFLISDSVSTQHAMLATQL 58
P+N ++ +++ + G + P++Q + IK + STQ ERYR + +D+ + MLA Q+
Sbjct: 4 PMNVISVGTLAQVARGTLPENPIMQCVQIKPMASTQGQERYRVVWNDTTNFIQGMLAQQI 63
Query: 59 NDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEP--IGNPKIFSESELT 116
N + +++KGS+ +L Y + V+++ I+++L+++ + +P +G P
Sbjct: 64 NHVAQENKLQKGSICRLTSYQANYVKDKHILIILDLDILDEYGQPEKLGTPVALE----- 118
Query: 117 AQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNP--GSFSTPNSGTFRAPNAGS 174
P+P V + P G N+ +G + + P G + T A N GS
Sbjct: 119 ---------APKP-EVMDDVKPQPG--NISGNGMYGNHQPAQGQQRSVAVRTNGASNGGS 166
Query: 175 IVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLR 234
HG I PI AL+PY RW IKAR T KG+++
Sbjct: 167 ---------------------HG---------NIHPIEALSPYAHRWTIKARCTHKGEIK 196
Query: 235 RYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKN 293
++N G+GK+FS + LD D GEIR T FN VD++YE+++ G VY +S + A+K
Sbjct: 197 TWHNKNGEGKLFSVNFLD-DSGEIRATGFNDAVDQWYEVLQEGSVYYVSSPCKVGLAKKQ 255
Query: 294 FNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVN 353
F++L N++E+ E + ++ EE D +P+ +++F +++++S + +S +D IGI+ V
Sbjct: 256 FSNLNNDYELTFERDTQIEK-AEEQDGVPQVRYNFTSLADLQSVDKDSTIDCIGILKEVG 314
Query: 354 PSVPILRKNGME-TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVK 412
I+ K + +R L L D + +V LT+WG K E D V++ K
Sbjct: 315 EVSEIVGKTSSKPYSKRELTLVDNTNYNVRLTVWG--------KTAENFDAQPESVVAFK 366
Query: 413 SGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVS----ISREIAAGG 468
KV+DF G+S+ + S + I+PD EA++L+ W+D+ G+N S +S +A G
Sbjct: 367 GLKVSDFGGRSLSLLSSGSMNIDPDIDEAYKLKGWYDASGRNEEFASHANTMSTAVATAG 426
Query: 469 AKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ 528
+KT++Q+++E LG E DW +V+A I ++K D+F Y AC I D CNKKV +
Sbjct: 427 GDRNAYKTIAQVRDENLGMGEDTDWFSVKATIIYVKQDNFAYPAC---ISDG-CNKKVIE 482
Query: 529 SG-NRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKY 587
+W+C++C+ D+RY++ + D TG W++ F E G+ I+G EL+ L+
Sbjct: 483 HEPGQWRCEKCDTSHPRADWRYIMSVNVSDHTGQMWLSCFNEVGQLIMGMDGNELHALQ- 541
Query: 588 ELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
E ++ + E + ++F+ K K + + D+QRV+ V A+ +N+ ES+ L DLI
Sbjct: 542 EAMEEKKLAEAFQEANCKTFVFKCKAKMDTFQDQQRVRYQVQYANPLNFQIESKKLADLI 601
>gi|302759481|ref|XP_002963163.1| hypothetical protein SELMODRAFT_141493 [Selaginella moellendorffii]
gi|300168431|gb|EFJ35034.1| hypothetical protein SELMODRAFT_141493 [Selaginella moellendorffii]
Length = 566
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 195/624 (31%), Positives = 320/624 (51%), Gaps = 87/624 (13%)
Query: 42 LISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDC 101
++SD AML T ++ V+ G+++ +++++ + S + N + N I+ DC
Sbjct: 1 MLSDGSMKAKAMLPTHMSAEVEAGKIQHLGLIRVLSHATSVIPN-----LPNKALIVTDC 55
Query: 102 EPIGNP---KIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGS 158
E + ++ SES +AQKT + P
Sbjct: 56 EVVSGALDREVGSESSSSAQKTQ------------------------------CDEKPKF 85
Query: 159 FSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHG---PILKNEAPARIIPIAALN 215
S P V+S VQ HG P + R+ P+ +L
Sbjct: 86 LSAP-------------VKSAAQIVQ---------EEHGRAAPAARMGVSRRVYPLVSLT 123
Query: 216 PYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIE 275
PYQG W IK RVT+KG LR Y NARG+G VF+ +L D DG +I+ T F ++FY + E
Sbjct: 124 PYQGSWTIKVRVTSKGPLRTYRNARGEGSVFNVELTDEDGTQIQATMFKEAAEKFYPMFE 183
Query: 276 VGR-------VYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDS---IPKQQ 325
+G+ VY +S G+L+ A + F+ +KN++E+ L A+S V+ TE D IP +
Sbjct: 184 LGKATSFLYQVYYVSNGNLRMANRRFSAVKNDYEMTLNASSGVEEVTEPDGKPGVIPLVK 243
Query: 326 FSFRHISEIESAENN-SIVDVIGIVISVNPSVPILRK-NGMETQRRILNLKDTSGRSVEL 383
++F I ++ + N + D IGIV SV+ ++ + RK + E +R + L D S ++V +
Sbjct: 244 YNFVKIEDLAAYVNKRELFDAIGIVQSVSSTMSVRRKVDNTEFAKREIVLVDQSQKTVAV 303
Query: 384 TLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDF-SGKSIGTIPSTQLFINPDFAEAH 442
+LW ++G KL EM+ PV+ ++S + NDF +G S+ T P++ ++INPD EA
Sbjct: 304 SLWSSLAVEDGAKLLEMLPDA--PVVVIRSVRANDFQAGVSLSTSPNSMVWINPDIPEAR 361
Query: 443 ELREWFDSGGKNAATVSISREIAA-GGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFIT 501
ELR W+D GK+A S+ ++ G N+ +S I +G K + TVRA I+
Sbjct: 362 ELRSWYDESGKDATLTSVGAGLSQRAGPTNDNRADISDITAPSVGEG-KAAYFTVRACIS 420
Query: 502 FIKSD-SFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTG 560
+IK D + YTAC CN+KV++ +R+ C+ C + D RY++ A++ D +G
Sbjct: 421 YIKPDQTMWYTACS------TCNRKVSEDSSRFWCEACQRHFDTASRRYIMLAKLTDHSG 474
Query: 561 LTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGD 620
WV+ F + E+ILG A EL +K + D ++ + V++ Y+FR+ + + Y
Sbjct: 475 DAWVSFFNDQAEQILGVSADELATIKSQDDDQRQYSSQLSKVVWSSYVFRVSVAQTEYLG 534
Query: 621 EQRVKITVIRADQVNYSSESRYLL 644
E+R +IT+ + +++SESR LL
Sbjct: 535 EKRQRITIRAVNDTDWASESRLLL 558
>gi|255954847|ref|XP_002568176.1| Pc21g11440 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589887|emb|CAP96041.1| Pc21g11440 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 609
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 204/638 (31%), Positives = 344/638 (53%), Gaps = 72/638 (11%)
Query: 21 KPLVQVMDIKLIGSTQ---ERYRFLISDSVSTQHAMLATQLNDRVKT-GQVKKGSVVQLI 76
+P+VQ + IK + + ERYR + SD + MLAT++++ V T G ++KGS V+L
Sbjct: 27 EPIVQCVQIKALPAQPNQPERYRAVFSDIENYVQTMLATRMSNSVVTDGSLRKGSFVRLK 86
Query: 77 DYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYS 136
+ ++V+ +KI+++L++E + K E++ + P+P+
Sbjct: 87 SFQSNSVKGKKILIILDLEVL----------KELGEADKIGE--------PKPLEAKPEE 128
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNH 196
+ +G + S+ G+ + N RA QP P + H
Sbjct: 129 GEVGQPTTISGNGFYGSKMEGAHAQQNR---RA--------------QPMSAPMSSSSAH 171
Query: 197 GPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGG 256
A I PI A++PY +W +KAR T+K +++ ++N G+GK+FS +LLD D G
Sbjct: 172 ---------ATIYPIEAISPYSNKWTMKARCTSKSNIKTWHNKNGEGKLFSVNLLD-DSG 221
Query: 257 EIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
EIR T FN D YE+ + G VY IS ++ A+K F +L N++E+ E + V+
Sbjct: 222 EIRATGFNEQCDMLYELFQEGSVYYISSPCRVQIAKKQFTNLNNDYELTFERDTIVEKAE 281
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLK 374
E++D +P+ +F+F ++++++ E ++ +DVIG++ V + I K+ G +R L L
Sbjct: 282 EQND-VPQIRFNFTTVADLQTVEKDTTIDVIGVLKDVGETSQITSKSTGKPYDKRELTLV 340
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
D +G SV LT+WG N V V++ K KV+DF G+S+ + S + +
Sbjct: 341 DNTGFSVRLTIWGASANN--------FSVAPESVVAFKGVKVSDFGGRSLSLLSSGSMTV 392
Query: 435 NPDFAEAHELREWFDSGGKN---AATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKP 491
+PD EAH LR W+D+ G++ + S+S + AK + KTV+Q++ E LG SE P
Sbjct: 393 DPDIGEAHRLRGWYDAQGRSENFTSHASLSNATNS-TAKMDRFKTVAQVREEQLGMSETP 451
Query: 492 DWVTVRAFITFIKSDS-FCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYRY 549
D+ +++A +T+IK DS +CY AC CNKKVT+ +W+C++C++ + +YRY
Sbjct: 452 DYFSLKATVTYIKQDSTWCYPACL----SENCNKKVTELDPGQWRCEKCDKTHPKPEYRY 507
Query: 550 LLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLF 609
++ + D TG W++ F E+G I+G PA EL L+ + D FGE+ + + F
Sbjct: 508 VMPISVSDHTGQLWLSCFDETGRNIMGKPADELMQLRED--DPSAFGEVFQGANCQTWSF 565
Query: 610 RLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
R K + +GD+QRV+ V + +NYS E+ L ++I
Sbjct: 566 RCKANVDNFGDQQRVRYQVSSSQAINYSDEASRLANII 603
>gi|169769542|ref|XP_001819241.1| replication factor A protein 1 [Aspergillus oryzae RIB40]
gi|83767099|dbj|BAE57239.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391863708|gb|EIT73008.1| single-stranded DNA-binding replication protein A [Aspergillus
oryzae 3.042]
Length = 605
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 203/639 (31%), Positives = 341/639 (53%), Gaps = 78/639 (12%)
Query: 21 KPLVQVMDIKLI---GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLID 77
+P+VQ + IK + + QERYR + SD + MLATQ N V +GQ++KG V+L
Sbjct: 27 EPVVQCVQIKPLPPQQNNQERYRAVFSDISNYVQTMLATQANRFVTSGQLRKGCFVRLKS 86
Query: 78 YICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNY 135
+ ++V+ +KI+++L++E + + + E IG PK +K+ P+
Sbjct: 87 FQANSVKGKKILIILDLEVLQDLGEAEKIGEPKPLESKTEEEEKSQPTT----------- 135
Query: 136 SAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRN 195
+ ++G + S+ G G +APN + + +
Sbjct: 136 ---------ISSNGFYGSKIQG-------GQLQAPNKSAQPQPAAASAH----------- 168
Query: 196 HGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDG 255
A I PI A++PY +W IKAR T+K ++R ++N GDGK+FS +LLD D
Sbjct: 169 ----------ATIYPIEAISPYSHKWTIKARCTSKSNIRTWHNRNGDGKLFSVNLLD-DS 217
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATSTVDLC 314
GEIR T FN D Y++ + G VY IS +K A+K F +L N++E+ E + V+
Sbjct: 218 GEIRATGFNDQCDMLYDVFQEGSVYYISSPCGVKLAKKQFTNLNNDYELTFERDTVVEKA 277
Query: 315 TEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILNL 373
++ D +P+ +FSF I +++S E ++ +DVIG++ V I+ K + +R L L
Sbjct: 278 EDQAD-VPQIRFSFTTIGDLQSVEKDTTIDVIGVLKEVAEVSQIMSKTTNKPYNKRELTL 336
Query: 374 KDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFP--VLSVKSGKVNDFSGKSIGTIPSTQ 431
D++G SV LT+WG ++ P V++ K KV+DF G+S+ + S
Sbjct: 337 VDSTGFSVRLTVWG----------STALNFNVTPESVIAFKGVKVSDFGGRSLSLLSSGS 386
Query: 432 LFINPDFAEAHELREWFDSGGKNAATVSISRE--IAAGGAKNEIHKTVSQIKNEGLGRSE 489
+ ++PD EAH+L+ W+D+ G++ S + +AA K E KTV+Q+K E LG S+
Sbjct: 387 MTVDPDIEEAHKLKGWYDAQGRDGVFASHASMPGVAASTTKLEQFKTVAQVKEEQLGMSD 446
Query: 490 KPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYR 548
+ + +++A + +IK D+ CY AC L G CNKKVT+ +W+C+RC++ +YR
Sbjct: 447 EVAYFSLKATVIYIKQDTMCYPAC-LSEG---CNKKVTELDPGQWRCERCDKTHPRPEYR 502
Query: 549 YLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYL 608
Y++ + D TG +++ F E G ++G A +L ++ DD G+I + +
Sbjct: 503 YIMLISVSDHTGQLYLSCFDEVGRYMMGTSADQL--MEIRQNDDKAAGDIFQDANCRTWN 560
Query: 609 FRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
FR + K + +GD+QR++ ++ A VNYS E+ L ++I
Sbjct: 561 FRCRAKIDNFGDQQRIRCQIVTAKPVNYSEEALRLANMI 599
>gi|322698294|gb|EFY90065.1| replication factor-A protein 1 [Metarhizium acridum CQMa 102]
Length = 595
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 204/636 (32%), Positives = 321/636 (50%), Gaps = 82/636 (12%)
Query: 22 PLVQVMDIKLIGSTQ---ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
P++Q + +K +G++ ERYR ++SD AMLATQ N + G++ +GS ++ Y
Sbjct: 29 PVMQCLQVKPMGASATGGERYRLVMSDGDHYVQAMLATQANHVIHDGKLVRGSFARVKQY 88
Query: 79 ICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAP 138
++ + I+V ILD E I L Q+ I S P V N
Sbjct: 89 NPQNLKGKNILV-------ILDLEVI--------ESLGVQEKIGS---PTAVETNEAKEQ 130
Query: 139 NSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGP 198
+ + N S P S R P + G
Sbjct: 131 TIASNDFYG-------NKKEESKPQSMPSR----------------------PAVHDGG- 160
Query: 199 ILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEI 258
I PI L+P+Q +W IKARVT K D++ ++ G+GK+FS +LLD + GEI
Sbjct: 161 --------NIYPIEGLSPFQHKWTIKARVTMKSDIKTWHKPTGEGKLFSVNLLD-ESGEI 211
Query: 259 RVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEE 317
+ T FN D FY++++ G VY IS + A+K F++L N++EI E + ++ E+
Sbjct: 212 KATGFNDQCDAFYDLLQEGSVYYISSPCRVNLAKKQFSNLPNDYEITFERDTRIEK-AED 270
Query: 318 DDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDT 376
++P+ +F+F I E+++ E ++ VDVIG++ V I K+ G Q+R L L D
Sbjct: 271 QTNVPQVRFNFCTIQELQNVEKDNTVDVIGVLKDVGEVSEITSKSSGKPFQKRELTLVDD 330
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP 436
+G SV +T+WG N D V++ K KV+DF GKS+ + S + ++P
Sbjct: 331 TGYSVRVTVWGKTANS--------FDANPESVVAFKGTKVSDFGGKSLSLLSSGTMTVDP 382
Query: 437 DFAEAHELREWFDSGGKN---AATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDW 493
D +AH L+ W+DS G+ A +++ AGG NE KT++Q+K+E LG + P +
Sbjct: 383 DIPDAHRLKGWYDSSGRTDNFATHQNMASMGNAGGRANET-KTIAQVKDENLGM-DAPAY 440
Query: 494 VTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQA 553
+++A I F+K D+FCY AC CNKKV ++G+ W C++C+ + DYRY++
Sbjct: 441 YSIKATIVFVKQDTFCYPAC----SKEGCNKKVVETGDGWYCEKCSVSHERPDYRYIVSL 496
Query: 554 QIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKI 613
+ D T W+ F E+GE I G A +L LK DD +F + + FR +
Sbjct: 497 NVADHTSHQWLNCFNETGEAIFGMTANQLMELKE--NDDAKFMAAFEAVNCKKLNFRCRA 554
Query: 614 KEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
K + +GD QRV+ VI A +++ SE L +LI +
Sbjct: 555 KMDNFGDTQRVRYQVISASFLDFKSEGNKLAELIKQ 590
>gi|401837707|gb|EJT41601.1| RFA1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 621
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 196/624 (31%), Positives = 326/624 (52%), Gaps = 67/624 (10%)
Query: 42 LISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRK--IIVVLNMETIIL 99
+ISD V A+L Q + ++ ++++G ++++I + V+ RK +++V + E +
Sbjct: 49 MISDGVYHMKALLRNQAASKFQSMELQRGDIIRVIIAEPAIVRERKKYVLLVDDFELVQS 108
Query: 100 DCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSF 159
E + F ++ + + P+ L +N + N N+ N G + + S
Sbjct: 109 RAEMVNQASTFLDNYFSER---PNETLKDEDISDNGNVTNQT--NIGNLGVGDMLHSNSN 163
Query: 160 STPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQG 219
N F N GS + +P I I L+PYQ
Sbjct: 164 LNANEKKF--VNEGSNSQKSRP--------------------------IFAIEQLSPYQN 195
Query: 220 RWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRV 279
W IKARV+ KG+++ ++N RGDGK+F+ + LD+ GEIR T FN +F EI++ G+V
Sbjct: 196 VWTIKARVSYKGEIKTWHNQRGDGKLFNVNFLDT-SGEIRATAFNDFATKFNEILQEGKV 254
Query: 280 YLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAEN 339
Y +SK L+PA+ F +L + +E+ L+ + V+ C +E + +PK F+F + I++ E
Sbjct: 255 YYVSKAKLQPAKPQFTNLTHPYELNLDRDTVVEECFDESN-VPKTHFNFIKLDAIQNQEV 313
Query: 340 NSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG----DFCNKEGQ 395
NS VDV+GI+ ++NP + + G + RR + + D SG S+ + LW DF EG
Sbjct: 314 NSNVDVLGIIQTINPQFELTSRAGKKFDRRDITIVDDSGFSISVGLWNQQALDFNLPEG- 372
Query: 396 KLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNA 455
V ++K +V DF GKS+ S+ L NP+ EA+ L+ W+DS G+NA
Sbjct: 373 -----------SVAAIKGVRVTDFGGKSLSMGFSSTLIPNPEIPEAYALKGWYDSKGRNA 421
Query: 456 ATVSISREIAAGG-AKNEIHK------TVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSF 508
++ +E GG + + K T+++ + E LGRSEK D+ + +A I+F+K D+F
Sbjct: 422 NFTTLKQEPGVGGQSAASLTKFIAQRITIARAQAENLGRSEKGDFFSAKAAISFLKVDNF 481
Query: 509 CYTACPLMIGDRQCNKKV-TQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAF 567
Y AC + CNKKV Q W+C++C+ ++RY+L I D+T W+T F
Sbjct: 482 AYPAC----SNENCNKKVLEQPDGTWRCEKCDTNNASPNWRYILTISIIDETNQLWLTLF 537
Query: 568 QESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKIT 627
+ +++LG A L LK E D F +I +S N+Y FR++ +E+ Y D+ R++ T
Sbjct: 538 DDQAKQLLGVDANTLMSLKEE--DPNEFTKITQSIQMNEYDFRIRAREDTYNDQSRIRYT 595
Query: 628 VIRADQVNYSSESRYLLDLISKSF 651
V +NY +E+ YL D +SK+
Sbjct: 596 VANLHSLNYKAEADYLADELSKAL 619
>gi|388581219|gb|EIM21529.1| replication factor-a protein [Wallemia sebi CBS 633.66]
Length = 599
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 179/480 (37%), Positives = 278/480 (57%), Gaps = 35/480 (7%)
Query: 180 QPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNA 239
+P V+P +P NF + GP ++AP + PI L+PYQ +W IKARVT K D++ ++N
Sbjct: 141 KPDVKPDIKP--NF-SKGP--SSQAP--VYPIEGLSPYQNKWTIKARVTQKSDIKFWSNQ 193
Query: 240 RGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKN 299
RG+GK+FS +L+D + GEIR T FN VD FY ++E G+V+ I+K ++ A+K F++L+N
Sbjct: 194 RGEGKLFSVNLMD-ETGEIRATGFNESVDEFYNMLEEGKVFFITKARVQIAKKQFSNLQN 252
Query: 300 EWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV-NPSVPI 358
E+EI + T+ ++ C + D +P ++SF + +E+ E N+I DV+G+V + PS I
Sbjct: 253 EYEIAFDKTTHIEPCYDTSD-VPDVKYSFTELQNLENLEPNAITDVLGVVTTAEEPSQII 311
Query: 359 LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVND 418
+ +R LN+ D S +SV LTLWG KL E D PV++ K KV+D
Sbjct: 312 SKSTQKPYTKRELNIVDRSQQSVRLTLWG--------KLAENFDQVNEPVIAFKGVKVSD 363
Query: 419 FSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAA-----GGAK-NE 472
F G+S+ + ++ LF+NPD EAH LR W+D GKN + + + G K NE
Sbjct: 364 FGGRSLSMVGASTLFVNPDIPEAHSLRGWYDQQGKNEQFSTFNNSSSTVKPEPGTVKPNE 423
Query: 473 IHKTVSQIKNE--GLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSG 530
I KT+ Q+K GL S KPD+ T +A +T+IK ++ Y +CP + KK+TQ
Sbjct: 424 I-KTLEQVKQSQLGLNDSGKPDYWTGKATVTYIKKENITYPSCPNDM------KKLTQDM 476
Query: 531 N-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYEL 589
N +W+C++C D +YRY++ D TG W++ F + G E+ PA +L +
Sbjct: 477 NDKWRCEKCESSFDAPEYRYIITCNATDHTGQIWLSGFNDFGLELFKMPANDLQAM-VNN 535
Query: 590 QDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
DD F +++ + + + F + K++ + D RV+ + RA VNY SE L + ISK
Sbjct: 536 GDDASFEAAVKNALGSSFNFNCRAKQDTFNDNVRVRHQINRASTVNYKSEINRLCETISK 595
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 1 MPVNLTPNSISLIN-----GGDVNSKPLVQVMDIKLIGSTQE----RYRFLISDSVSTQH 51
MP LT ++I IN G P+VQV+ +K ++ + RYR ++SD
Sbjct: 1 MP-ELTKDAIEAINSENPAGLLAGQNPVVQVLQVKKATASSDKAPDRYRMVLSDGKYYMQ 59
Query: 52 AMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILD-CEPIGNPKIF 110
AML TQLN + + K SV++L++Y + VQNR +++ L ++ + E IG+P+ F
Sbjct: 60 AMLGTQLNSYPEQELLIKNSVIKLLNYAVNVVQNRLLVIALQIDIVETGPLEKIGSPQNF 119
Query: 111 SESE 114
+++
Sbjct: 120 DQTK 123
>gi|195390608|ref|XP_002053960.1| GJ23056 [Drosophila virilis]
gi|194152046|gb|EDW67480.1| GJ23056 [Drosophila virilis]
Length = 609
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 218/660 (33%), Positives = 329/660 (49%), Gaps = 105/660 (15%)
Query: 12 LINGGDVNSKPLVQVMDIKLIG--STQERYRFLISDS-VSTQHAMLATQLNDRVKTGQVK 68
++NG DV S+P++Q++ IK I S QERYR L+SD +AMLA+QLN+ G +
Sbjct: 15 IMNGEDV-SQPVLQILGIKRINTNSDQERYRLLMSDGKYYNSYAMLASQLNEMQNRGLLN 73
Query: 69 KGSVVQLIDYICSTV----QNRKIIVVLNMETIILDCE---PIGNPKIFSESELTAQKTI 121
+ ++V+L Y+ S V +++++V + + E IG+P +T +
Sbjct: 74 ENTIVRLDKYMTSMVGKEGSGKRVLIVTELTVLNSGDEVKSKIGDP-------VTYENAA 126
Query: 122 PSNNLPQPVRVNNYSAP------------NSGTFNLQNSGTFNSQNPGSFSTPNSGTFRA 169
+ P+P V S P N+ T N +GT NS S + P
Sbjct: 127 KQDTAPKPAAV-AASVPVKKEQSYNNNNNNNHTMNSTLNGTLNS----SLTHP------- 174
Query: 170 PNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTA 229
+ S P YQ +W IKARVT+
Sbjct: 175 ------ISSLSP-----------------------------------YQNKWVIKARVTS 193
Query: 230 KGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKP 289
K +R ++NARG+GK+FS DL+D + GEIR T F D+FY++IEV VY SK LKP
Sbjct: 194 KTAIRTWSNARGEGKLFSMDLMD-ESGEIRATAFKEQCDKFYDLIEVDNVYFFSKCQLKP 252
Query: 290 AQKNFNHLKNEWEIFLEATSTVDLCTEEDD-SIPKQQFSFRHISEIESAENNSIVDVIGI 348
A K ++ LKN++E+ + V C +ED+ IP+ +F IS++ + EN VD IGI
Sbjct: 253 ANKQYSQLKNDYEMTFTNETMVQPCDDEDNGGIPEIKFDLVPISQVANMENKEAVDTIGI 312
Query: 349 VISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFP 407
V R E ++R L L D S +V LTLWGD +Q P
Sbjct: 313 CKEVGELQAFTSRTTNKEFKKRELTLVDMSNAAVTLTLWGDEAVNFDGHVQ--------P 364
Query: 408 VLSVKSGKVNDFS-GKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAA 466
V+ VK ++N+F+ GKS+ + L INPD EAH+LR WFD+GG + + +S
Sbjct: 365 VILVKGSRINEFNGGKSLSMGGGSILKINPDIPEAHKLRGWFDNGGGDNISNMVSAR-TG 423
Query: 467 GGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKV 526
GG+ + T+ + LG +KPD+ +A + +K ++ Y ACP CNKKV
Sbjct: 424 GGSFSTDWVTLKDARLRNLGSGDKPDYFQCKAVVHIVKQENAFYKACP----QADCNKKV 479
Query: 527 TQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYML 585
GN +++C+RCN YR L+ I D T WVT F E+GE++L A+E +
Sbjct: 480 VDEGNGQYRCERCNAAFPNFKYRLLINMSIGDWTSNRWVTCFSETGEQLLKHNAQE---V 536
Query: 586 KYELQDDVRFGEIIRSRV-FNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
L++D E + + + F+ Y+F+L+ K E+YGD R K+TV +NY +++L+
Sbjct: 537 GEALENDPAAAEKMFADINFSSYIFKLRCKNEMYGDMTRNKLTVQSMTPINYKEYNKHLI 596
>gi|307170289|gb|EFN62644.1| Replication protein A 70 kDa DNA-binding subunit [Camponotus
floridanus]
Length = 608
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 208/656 (31%), Positives = 334/656 (50%), Gaps = 91/656 (13%)
Query: 12 LINGGDVNSKPLVQVMDIKLIGST-----QERYRFLISDSVSTQH-AMLATQLNDRVKTG 65
++ G DV+ KP+ Q++ K + + +RYR L+SD + MLATQLN ++
Sbjct: 16 IMKGVDVD-KPVFQMLGYKKLPNKDGTIGNDRYRLLVSDGKNMNSFTMLATQLNHLIENN 74
Query: 66 QVKKGSVVQLIDYICSTV----QNRKIIVVLNMETII----LDCEPIGNPKIFSESELTA 117
+ + ++ ++ +Y S+V + +++I+++ +E + C+ +GNP ES+ A
Sbjct: 75 ILTEYAICKVSNYHLSSVNSGGKEKRVILIMGIEVTTPGSKVGCK-LGNPTNI-ESKSEA 132
Query: 118 QKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVR 177
T + Q T Q +GT N ++ + + T
Sbjct: 133 DSTTADKSTGQT------------TGRYQTNGTAQRSNSNNYGSSDIST----------- 169
Query: 178 SFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYN 237
PIAAL+PYQ +W IK RVT K +R ++
Sbjct: 170 -------------------------------TPIAALSPYQNKWVIKVRVTNKSPIRTWS 198
Query: 238 NARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHL 297
N+RG+GKVFS DL+D + GEIR T F + D+FY+++E+G VY IS+ LK A K FN L
Sbjct: 199 NSRGEGKVFSMDLID-ESGEIRCTAFRDMCDKFYDMLEIGNVYYISRCQLKAANKQFNSL 257
Query: 298 KNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVP 357
KN++E+ + + + C E + IP QF+F IS++E+ E N I+DV+G+V + N
Sbjct: 258 KNDYEMTMTNDTEIVPCHENIEDIPTLQFNFCSISQVENKERNDIIDVLGVVTTFNDVQH 317
Query: 358 ILRKN-GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKV 416
I+++N G E +R +N+ D S V +TLWG K E D P++++K ++
Sbjct: 318 IVKRNTGQEFVKRDINIVDDSNAMVSVTLWG--------KQAEDFDGSNNPIIAIKGARI 369
Query: 417 NDFS-GKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHK 475
+F+ GK++ + S+ L +PD EAH LR W+ + G + S+SR + GG N
Sbjct: 370 GEFNGGKNLSLLNSSTLEKDPDLPEAHRLRGWYTTVGPSENAKSLSR-VGGGGDFNAPLH 428
Query: 476 TVSQIKNEGLG-RSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKK-VTQSGNRW 533
T + LG + PD TV A I I+ ++ Y ACP+ C KK + QS +
Sbjct: 429 TFEEATEARLGEKLNIPDSYTVMATICLIRVENSIYKACPV----ESCKKKLIDQSTGIF 484
Query: 534 QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDV 593
+C++CN++ YR L I D TG W+TAF E E+ILG A+EL LK D+
Sbjct: 485 RCEKCNRDYPNFVYRLLASMNIADATGSRWITAFSEDAEKILGMSAQELGELKE--NDNE 542
Query: 594 RFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+ + F +++F L+ K E++ DE RV+ T +NY + +L+D +SK
Sbjct: 543 AYMQKFGDANFKRFMFSLRAKSEVFQDEMRVRHTCSSVAPLNYKTHLTHLIDKVSK 598
>gi|17737841|ref|NP_524274.1| replication protein A 70 [Drosophila melanogaster]
gi|2498844|sp|Q24492.1|RFA1_DROME RecName: Full=Replication protein A 70 kDa DNA-binding subunit;
Short=RP-A p70; AltName: Full=Replication factor A
protein 1; Short=RF-A protein 1; AltName:
Full=Single-stranded DNA-binding protein; Short=DmRPA1
gi|1359608|emb|CAA94241.1| replication protein A [Drosophila melanogaster]
gi|7299004|gb|AAF54206.1| replication protein A 70 [Drosophila melanogaster]
gi|17861998|gb|AAL39476.1| LD04815p [Drosophila melanogaster]
gi|220943002|gb|ACL84044.1| RpA-70-PA [synthetic construct]
gi|220953088|gb|ACL89087.1| RpA-70-PA [synthetic construct]
Length = 603
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 209/656 (31%), Positives = 332/656 (50%), Gaps = 83/656 (12%)
Query: 3 VNLTPNSISLINGGDVNSKPLVQVMDIKLIGST--QERYRFLISDS-VSTQHAMLATQLN 59
+L+ I+ I G+V P++Q++ IK I S ERYR LISD +AMLA+QLN
Sbjct: 4 ASLSTGVIARIMHGEVVDAPVLQILAIKKINSAADSERYRILISDGKYFNSYAMLASQLN 63
Query: 60 DRVKTGQVKKGSVVQLIDYICSTV----QNRKIIVVLNMETIILDCEPIGNPKIFSESEL 115
G++++ ++VQL Y+ S V ++++++ + + NP +S++
Sbjct: 64 VMQHNGELEEFTIVQLDKYVTSLVGKDGAGKRVLIISELTVV--------NPGAEVKSKI 115
Query: 116 TAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSI 175
+PV N + + P T NS
Sbjct: 116 G-----------EPVTYENAAKQDLA--------------PKPAVTSNS----------- 139
Query: 176 VRSFQPTVQPPYQPPPNFRNHGPILKNEA--PARIIPIAALNPYQGRWAIKARVTAKGDL 233
+P + P+ N+ I+ N + PI++L+PYQ +W IKARVT+K +
Sbjct: 140 --------KPIAKKEPSHNNNNNIVMNSSINSGMTHPISSLSPYQNKWVIKARVTSKSGI 191
Query: 234 RRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKN 293
R ++NARG+GK+FS DL+D + GEIR T F D+FY++I+V VY ISK LKPA K
Sbjct: 192 RTWSNARGEGKLFSMDLMD-ESGEIRATAFKEQCDKFYDLIQVDSVYYISKCQLKPANKQ 250
Query: 294 FNHLKNEWEIFLEATSTVDLCTE-EDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV 352
++ L N +E+ + V LC + +DD IP+ +++ IS++ EN + VD IGI V
Sbjct: 251 YSSLNNAYEMTFSGETVVQLCEDTDDDPIPEIKYNLVPISDVSGMENKAAVDTIGICKEV 310
Query: 353 NPSVP-ILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSV 411
+ R E ++R + L D S ++ LTLWGD +Q PV+ V
Sbjct: 311 GELQSFVARTTNKEFKKRDITLVDMSNSAISLTLWGDDAVNFDGHVQ--------PVILV 362
Query: 412 KSGKVNDFSGKSIGTIPSTQLF-INPDFAEAHELREWFDSGGKNAATVSISREIAAGGAK 470
K ++N+F+G ++ + INPD EAH+LR WFD+GG ++ +S G
Sbjct: 363 KGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRGWFDNGGGDSVANMVSARTGGGSFS 422
Query: 471 NEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSG 530
E T+ + LG +KPD+ +A + +K ++ Y ACP CNKKV G
Sbjct: 423 TE-WMTLKDARARNLGSGDKPDYFQCKAVVHIVKQENAFYRACP----QSDCNKKVVDEG 477
Query: 531 N-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYEL 589
N +++C++CN YR L+ I D T WV++F E GE++LG ++E + L
Sbjct: 478 NDQFRCEKCNALFPNFKYRLLINMSIGDWTSNRWVSSFNEVGEQLLGHTSQE---VGEAL 534
Query: 590 QDDVRFGEIIRSRV-FNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
++D E I S + F ++F+L+ K E+YGD R K+TV +N+ +++LL
Sbjct: 535 ENDPAKAEQIFSALNFTSHIFKLRCKNEVYGDMTRNKLTVQSVAPINHKEYNKHLL 590
>gi|297797049|ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arabidopsis lyrata subsp.
lyrata]
gi|297312244|gb|EFH42668.1| hypothetical protein ARALYDRAFT_496254 [Arabidopsis lyrata subsp.
lyrata]
Length = 631
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 208/670 (31%), Positives = 353/670 (52%), Gaps = 68/670 (10%)
Query: 1 MPVNLTPNSISLI------NGGDVNSKPLVQVMDIKLIGSTQERYRFLISDSVSTQHAML 54
M ++TP++IS + + + +VQV+D+K IG+ RY F +D + AM
Sbjct: 1 MQTSVTPDAISTVLSNPSFDSSSERPEIVVQVVDLKPIGN---RYTFSANDGKTRVKAMF 57
Query: 55 ATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIG---NPKIFS 111
L + +G+++ +++LID+ + + ++ L + CE +G + I
Sbjct: 58 TPTLTPEIISGKIQNLGLIRLIDFTVNDISSKSTKYFL-----VNKCEAVGSVLDSDINL 112
Query: 112 ESELTAQKTIPSNNLPQ--PVR-VNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFR 168
ES+ A+ + P + PV VN+ L+ F +++ + G
Sbjct: 113 ESKSHAEASDPKKQKLEHSPVSPVNDVKTDVCTGITLKPKQEFVAKSASQIMSEQRG--- 169
Query: 169 APNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVT 228
N P + R+ P+ +LNPYQG W IK RVT
Sbjct: 170 --------------------------NAAPAARMAMTRRVHPLVSLNPYQGNWTIKVRVT 203
Query: 229 AKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLK 288
KG +R Y NARG+G VF+ +L D +G +I+ T FN +FY+ ++G+VY IS+GSLK
Sbjct: 204 NKGVMRNYKNARGEGCVFNVELTDEEGTQIQATMFNDAARKFYDRFQLGKVYYISRGSLK 263
Query: 289 PAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAEN-NSIVDVIG 347
A K F ++N++E+ L S V+ + E+ IP+ +F+F I E+ N ++D+IG
Sbjct: 264 LANKQFKTVQNDYEMTLNENSEVEEASSEEMFIPETKFNFVPIEELGLYVNQKELIDLIG 323
Query: 348 IVISVNPSVPILRKNGMET-QRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFF 406
+V SV+P++ I R+ E +R + L D S ++V ++LW D GQ+L +M D
Sbjct: 324 VVQSVSPTMSIRRRTDNEMIPKRDITLADESKKTVVVSLWNDLATGIGQELLDMADKS-- 381
Query: 407 PVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREI-- 464
PV+++KS KV DF G S+ TI + + INP+ EA +L+ WFDS GK + SI +
Sbjct: 382 PVVAIKSLKVGDFQGVSLSTISRSNVVINPESPEAKKLKSWFDSEGKEISMSSIGSGMSP 441
Query: 465 -AAGGAKNEIHKTV--SQI-KNEGLGRSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGD 519
+ G+++ V S I N LG EKP + + RA+I+FIK D + Y AC
Sbjct: 442 SSKNGSRSMYTDRVLLSHITSNPSLGE-EKPVFFSTRAYISFIKPDQTMWYQAC------ 494
Query: 520 RQCNKKVTQSGNR-WQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCP 578
+ CNKKVT++ + + C+ C ++ +EC RY++ ++ D +G TW+++F + E+ILGC
Sbjct: 495 KTCNKKVTEALDSGYWCEGCQKKYEECSLRYIMAVKVTDSSGETWISSFNDEAEKILGCS 554
Query: 579 AKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSS 638
A +L L+ E + + ++ ++ ++FR+ + + Y E+R ++TV +++++
Sbjct: 555 ADDLNKLRSEGGEVNEYQTKLKEATWSSHVFRVSVSQNEYNGEKRQRVTVKGVAPLDFAA 614
Query: 639 ESRYLLDLIS 648
E+R LL IS
Sbjct: 615 ETRLLLQDIS 624
>gi|171691865|ref|XP_001910857.1| hypothetical protein [Podospora anserina S mat+]
gi|170945881|emb|CAP72682.1| unnamed protein product [Podospora anserina S mat+]
Length = 630
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 204/649 (31%), Positives = 340/649 (52%), Gaps = 74/649 (11%)
Query: 22 PLVQVMDIKLI----GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLID 77
P++Q + IK + G ERYR ++SD + MLATQ N V G++K+G +V++
Sbjct: 28 PVLQCLQIKTLDSKGGGAPERYRIVLSDVRNYVQCMLATQANHVVHEGKLKRGGIVRMKS 87
Query: 78 YICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSA 137
Y ++ + +++VL +E I E +G P + + PV +
Sbjct: 88 YQAQALKGKNVLIVLELEAI----ESLGAP----------------DKIGNPVGLE---- 123
Query: 138 PNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHG 197
G L+ + + +F + AP G + + VQ PN NH
Sbjct: 124 ---GGAKLEEAQPAAAAAAPAF-------YGAPK-GEPTQESKSQVQRQLASRPNNNNHN 172
Query: 198 PILKNEA--PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDG 255
+ + I PI AL+PY +W IKAR+T K D++ ++ G+GK+FS +LLD +
Sbjct: 173 NNTRTSGGVSSTIYPIEALSPYAHKWTIKARLTHKSDIKTWHKNNGEGKLFSVNLLD-ES 231
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATSTVDLC 314
EI+ T FN VD+FY++++ G+VY IS ++ A+K F++L N++E+ E + V+
Sbjct: 232 SEIKATMFNDQVDQFYDVLQEGQVYYISAPCRVQLAKKQFSNLPNDYELTFERDTVVEK- 290
Query: 315 TEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILNL 373
E+ S+P+ +F+F +I E++S E ++ VDV+G++ +V+ I K+ + +R L L
Sbjct: 291 AEDQSSVPQVRFNFCNIQELQSVEKDATVDVLGVLKTVHEVSSITSKSTQKPYDKRELEL 350
Query: 374 KDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF 433
D +G SV +T+WG + K +E V++ K +V+DF+G+S+ + S +
Sbjct: 351 VDQTGYSVRVTVWGKTATEFQGKPEE--------VIAFKGTRVSDFNGRSLSLLSSGTMA 402
Query: 434 INPDFAEAHELREWFDSGGKN---AATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEK 490
I+PD EAH L+ W+DS G++ A ++S AA G NEI + Q+K + +G +K
Sbjct: 403 IDPDIPEAHALKGWYDSTGRHSDFATHSNMSSVGAASGRTNEI-LMIQQVKEKDVG-FDK 460
Query: 491 PDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRY 549
P++ +V+A I +K D+FCY AC CNKKVT G+ W+C++C+ D +YRY
Sbjct: 461 PEYFSVQATIVHVKQDNFCYPACR----SEGCNKKVTDMGDGTWRCEKCDVTHDRPEYRY 516
Query: 550 LLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLK-----------YELQDDVRFGEI 598
+L D TG W++ F E G ++LG A EL K + +VRF
Sbjct: 517 ILNFNCSDHTGQIWLSCFDEQGRKLLGASADELMEWKQIKESGDASDEARKEAEVRFTTA 576
Query: 599 IRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
S + FR + K + YG++QRV+ ++ A ++Y E L ++I
Sbjct: 577 FDSANCRKMTFRARAKMDTYGEQQRVRYQLMEATPLDYKMEGNRLAEMI 625
>gi|392871535|gb|EJB12180.1| replication factor-a protein 1 (rpa1), variant [Coccidioides
immitis RS]
Length = 572
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 195/636 (30%), Positives = 322/636 (50%), Gaps = 77/636 (12%)
Query: 1 MPVNLTPNSISLI--NGGDVNSKPLVQVMDIKLIGSTQ---ERYRFLISDSVSTQHAMLA 55
M N+T ++S I + + +KP+VQ + +KL+ S +RYR + SD + MLA
Sbjct: 1 MANNITVGALSAIFDDTKEKVAKPIVQCLHVKLLSSPSGGPDRYRAVFSDISNFVQTMLA 60
Query: 56 TQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSES 113
+ LND V G +++G VQL + + V+ ++I++VL+++ + + +CE IG+PK
Sbjct: 61 SSLNDLVNNGALRRGCFVQLKSFQANFVKGKRILIVLDLDVLEDLGECERIGDPKPLETK 120
Query: 114 ELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
+K P+ + + G + + S + P
Sbjct: 121 VAEVEKPTPTA--------------------ISSDGFYGVVSEHSVAQPQRHQ------- 153
Query: 174 SIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDL 233
R+ PT+ P + A I PI AL+PY +W IKAR T K +
Sbjct: 154 ---RATVPTMAPTH------------------ANIYPIEALSPYSHKWTIKARCTNKSAI 192
Query: 234 RRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQK 292
+++ N G+G++FS +LLD D GEIR T F D Y + E G VY IS ++ A++
Sbjct: 193 KKWYNRNGEGRLFSVNLLD-DSGEIRATAFKEQCDLLYPLFEEGSVYYISSPCRVQMAKR 251
Query: 293 NFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV 352
F+++ N++E+ E + ++ + +D +P+ +F+F I + S E + +DV+G++ +V
Sbjct: 252 EFSNVNNDYELTFERDTVIERAEDHED-VPQMRFNFTSIGHLHSVEKGTTIDVLGVLKTV 310
Query: 353 NPSVPILRKN-GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSV 411
P + K+ G +R L L D +G SV LT+WG DV V++
Sbjct: 311 EPVAEVPSKSTGKRYTKRELMLVDDTGYSVPLTIWGGMATS--------FDVMPDSVVAF 362
Query: 412 KSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGK--NAATVSISREIA-AGG 468
K KV+DF G+S+ + S + +PD EAH+L+ W+D+ GK AT ++S A + G
Sbjct: 363 KGVKVSDFGGRSLSLLNSGTITSDPDIEEAHKLKGWYDAQGKFDQFATHALSENAAISTG 422
Query: 469 AKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ 528
+ +I+K + ++++ LG +EKPD+ ++RA + FIK D+ CY AC +CNKKV Q
Sbjct: 423 TRQDIYKAIVEVRDNQLGMTEKPDYFSLRATVVFIKQDTICYPACV----QERCNKKVVQ 478
Query: 529 -SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKY 587
+W C+ C + +YRY+L A + D TG W+ F E G I+G PA L LK
Sbjct: 479 VDPEQWLCEHCEKSSLRPEYRYILSANVSDHTGQLWLNCFDEVGRAIMGMPANVLMELKE 538
Query: 588 ELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQR 623
DD E I + + K K + + ++ R
Sbjct: 539 --SDDKAASEAILHATCQMWNLKCKAKLDNFQNQPR 572
>gi|389748589|gb|EIM89766.1| replication factor-a protein [Stereum hirsutum FP-91666 SS1]
Length = 596
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 198/657 (30%), Positives = 325/657 (49%), Gaps = 87/657 (13%)
Query: 5 LTPNSISLINGGDVN------SKPLVQVMDIKLIGSTQ--ERYRFLISDSVSTQHAMLAT 56
LT + + + GD + S P+VQ++ IK + ++Q +RYR +ISD V+ +MLAT
Sbjct: 7 LTEGACARFHSGDKDDEQLWSSSPIVQLLSIKKVSASQGHDRYRVIISDGVNFIQSMLAT 66
Query: 57 QLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELT 116
QLN V+ + K ++ +L + C+ +QN++++VVL + + D E IG
Sbjct: 67 QLNSLVEADTITKNTICKLTNMSCNVIQNKRLVVVLGLSVVQKDAEKIG----------- 115
Query: 117 AQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIV 176
NP +F T + T P A +I
Sbjct: 116 --------------------------------------NPAAFPTDEATT---PAASNIT 134
Query: 177 RSFQPTVQPPYQPPPNFRNHGPILKNEAPAR--IIPIAALNPYQGRWAIKARVTAKGDLR 234
PT P P+ ++ R I PI L+PYQ W IKARV K D+R
Sbjct: 135 ----PTSAPSATTTPSVPQQPRQQQSSRGTRNNIFPIEGLSPYQNNWTIKARVIQKSDIR 190
Query: 235 RYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNF 294
Y+N RG+GK F+ L+D D GEI+ T FNAV D Y+ + +VY ISK + +++ F
Sbjct: 191 TYSNQRGEGKFFNVTLMD-DSGEIKGTGFNAVADELYDKLVEDKVYYISKARVNLSKRKF 249
Query: 295 NHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNP 354
+ + E+E+ LE + ++ C + ++P +++F + +E +SI DVIG+V V+
Sbjct: 250 SSAQ-EYELSLERNTEIEEC-HDTSNLPVVKYNFIELGNLEELPKDSICDVIGVVKDVSE 307
Query: 355 SVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSG 414
I K +R L L D+S SV LTLWG K E + V++ K
Sbjct: 308 VSEIQTKTQRTLSKRELTLVDSSAFSVRLTLWG--------KQAEQYNASPNSVIAFKGV 359
Query: 415 KVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKN----AATVSISREIAAGGAK 470
KV DF G+S+ S+ + INPD EAH +R W+D G + A T S++ G
Sbjct: 360 KVGDFGGRSLSMFSSSTMAINPDMPEAHNIRGWYDDIGTSTQFQAHTSSMTSAGTGGTIN 419
Query: 471 NEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSG 530
+T++ +K LG S+K ++ + RA + I+ ++ Y AC G C+KKV +
Sbjct: 420 RSEMRTLNDVKESQLGSSDKVEYFSCRATVMHIRGENISYPAC----GTEGCSKKVVEGH 475
Query: 531 NRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQ 590
+ W+C++C++ + YRY++Q + D +G W++ F + G + G A EL+ +K +
Sbjct: 476 DGWRCEKCDRSFETPTYRYMIQMAVADYSGQAWLSGFNDVGLIVFGMTANELHDIKE--R 533
Query: 591 DDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
DD + I++ N Y F + K++ + D R++ + R +NY E++ +DL+
Sbjct: 534 DDAIYTAILQKATCNTYNFACRAKQDTFNDTTRIRYGISRIQPLNYEEETQSFVDLL 590
>gi|356564937|ref|XP_003550703.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Glycine max]
Length = 600
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 210/665 (31%), Positives = 352/665 (52%), Gaps = 93/665 (13%)
Query: 5 LTPNSISLINGGDVNSKP---------LVQVMDIKLIGSTQERYRFLISDSVSTQHAMLA 55
+TP+++S++ N+ P +VQV+D+K G+ +Y F +D + AM++
Sbjct: 6 VTPDAVSMLLA---NTCPDSSSDLPEIVVQVLDLKATGN---KYMFTANDGKTKLKAMIS 59
Query: 56 TQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESEL 115
+ + +V +G ++ +++++DY + + N+ + I+ CEP+ +P + E E+
Sbjct: 60 SDMCSQVLSGAIQNLGLIRVLDYTVNVIPNKS-----DKYLIVTKCEPV-SPAL--EIEI 111
Query: 116 TAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNA-GS 174
++++ L V V SA L+ G AP A +
Sbjct: 112 KSEESGSGILLKSKVEVVTKSANQI----LREHGN-----------------SAPAARMA 150
Query: 175 IVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLR 234
+ R +P V +LNPYQG W IK VT+KG++R
Sbjct: 151 MTRRVRPLV-----------------------------SLNPYQGNWTIKVSVTSKGNMR 181
Query: 235 RYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNF 294
Y NARGDG VF+ +L D DG +I+ T FN +FY+ +GRVY ISKG+LK A K F
Sbjct: 182 NYKNARGDGCVFNVELTDEDGTQIQATMFNNAARKFYDKFILGRVYYISKGTLKVANKQF 241
Query: 295 NHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNS-IVDVIGIVISVN 353
++N++E+ L S V+ E +P+ +F+F I ++ N S +VDVIGIV +V+
Sbjct: 242 KTVQNDYEMTLNENSEVEEVAGEASFVPETKFNFVQIDQLGPHVNKSELVDVIGIVKNVS 301
Query: 354 PSVPILRKNGMET-QRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVK 412
++ I RK+ E+ +R + + D + ++V ++LW + GQ+L ++VD PV+++K
Sbjct: 302 STMTIRRKSDNESIPKRDITIADDTKKTVVVSLWNELATTTGQELLDIVDKS--PVVAIK 359
Query: 413 SGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSI---SREIAAGGA 469
S KV DF G S+ TI + + +NP EA LR W+D GK+AA S+ S + G
Sbjct: 360 SLKVGDFQGVSLSTIGKSVVLVNPVIPEAKNLRSWYDFEGKDAAMDSVGSGSSPTSNNGI 419
Query: 470 KNEIHKTV--SQI-KNEGLGRSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKK 525
++ V S I N LG KP + ++R I+FIK D + Y AC + CNKK
Sbjct: 420 RSVYTDRVLLSDITSNPSLGDG-KPAFFSLRGHISFIKPDQAMWYRAC------KTCNKK 472
Query: 526 VTQS-GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYM 584
VT+S G+ + CD C + ++C RY++ A++ D + T+++AF + E+I+GC A +L
Sbjct: 473 VTESVGSGYLCDGCQKSDEQCSLRYIMVAKVSDASAETYISAFNQEAEKIIGCSADDLDN 532
Query: 585 LKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
LK + + + ++ + Q+LFR+ + Y E+R +ITV V++++ESR+LL
Sbjct: 533 LKSQEGEVNPYQMTLKEATWAQHLFRVSVTPNEYNGEKRQRITVRAVVPVDFAAESRFLL 592
Query: 645 DLISK 649
+ +SK
Sbjct: 593 EDLSK 597
>gi|254585755|ref|XP_002498445.1| ZYRO0G10428p [Zygosaccharomyces rouxii]
gi|238941339|emb|CAR29512.1| ZYRO0G10428p [Zygosaccharomyces rouxii]
Length = 615
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 167/485 (34%), Positives = 276/485 (56%), Gaps = 29/485 (5%)
Query: 178 SFQPTVQP-PYQPPPNFRNHGPILKNEAPAR-IIPIAALNPYQGRWAIKARVTAKGDLRR 235
S +P P P Q PN ++ P+ +R I I L+PYQ W IKARV+ KGD++
Sbjct: 147 SGEPNNTPKPQQAKPNTGSNFPMGSGSQKSRPIFAIEQLSPYQNIWTIKARVSYKGDIKT 206
Query: 236 YNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFN 295
++N RGDGK+ + + LD+ GEIR T FN +F EI++ G+VY +SK L+PA+ F+
Sbjct: 207 WHNQRGDGKLLNLNFLDT-SGEIRGTAFNDNATKFNEILQEGKVYFLSKARLQPAKPQFS 265
Query: 296 HLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPS 355
+L + +E+ L+ + V+ C + D +PK FSF ++ I++ E NS VDV+GI+ +VNP
Sbjct: 266 NLPHPYELMLDRDTVVEECLDASD-VPKTHFSFIKLNTIQNQEANSTVDVLGIIQTVNPH 324
Query: 356 VPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGF--FPVLSVKS 413
++ + G RR + + D S S+ + LW Q+ VD V+++KS
Sbjct: 325 FELISRAGKRFDRRDITIVDDSEYSIAVGLWN----------QQAVDFNLPEGSVVAIKS 374
Query: 414 GKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEI 473
+V DF GKS+ ++ + NP+ EA+ L+ WFD+ G+N S+ E+ + +
Sbjct: 375 VRVTDFGGKSLSMGFTSTMIPNPEIPEAYSLKGWFDNTGRNLQYHSLKEEVNETNSTTNL 434
Query: 474 HK------TVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT 527
K T++ + + LGR+EK D+ +++A ++F+K D+F Y AC + CNKKV
Sbjct: 435 VKYISERTTIATAQAQNLGRNEKGDFFSIKAAVSFLKVDNFAYPACL----NENCNKKVI 490
Query: 528 -QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLK 586
Q W+C++C+ D+RYLL + D+TG W+T F + +++L A EL +LK
Sbjct: 491 EQPDQTWRCEKCDTNHPSPDWRYLLTISVLDETGQLWLTLFNDQAKQLLKVEASELVLLK 550
Query: 587 YELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDL 646
D F +I +S NQY FR++ +E+ Y ++ R++ TV +NY +E+ +L +
Sbjct: 551 ES--DPTAFSKITQSLQMNQYSFRIRAREDNYNNQSRIRYTVSNLHNINYKAEADFLAEQ 608
Query: 647 ISKSF 651
+++S
Sbjct: 609 LTQSL 613
>gi|448117323|ref|XP_004203227.1| Piso0_000828 [Millerozyma farinosa CBS 7064]
gi|359384095|emb|CCE78799.1| Piso0_000828 [Millerozyma farinosa CBS 7064]
Length = 629
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 200/652 (30%), Positives = 335/652 (51%), Gaps = 80/652 (12%)
Query: 21 KPL-VQVMDIKLI--------GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGS 71
KP+ VQV +IK+I G + +YR L++D + H ++ ++ + +K S
Sbjct: 30 KPIIVQVSNIKIIDQSPDGGNGESSIKYRVLLNDGQYSLHGLITSECVPYCEANGFRKTS 89
Query: 72 VVQLIDYICSTVQNRKIIVVLNMETIILDCEPI-GNPKIFSESELTAQKTIPSNNLPQPV 130
V+ + DY T Q + I+++ ++E I GN I S A+ P + + V
Sbjct: 90 VISVQDYNLVTTQ-KHIMIINSLEVKHQTSTKITGN--IASCDAYYAEH--PDEDFLELV 144
Query: 131 RVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPP 190
+ N + +S + N P S + + AP S+ + Q
Sbjct: 145 KRNQ----------VGDSFSDNKVQPPSNRSVSPSNGAAPKGASMFQQRQ---------- 184
Query: 191 PNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDL 250
+ I L+PYQ W IKARV+ KGD+R+++NARG+GK+F+ +
Sbjct: 185 -----------------VNAIEQLSPYQNHWTIKARVSYKGDIRKWSNARGEGKLFNVNF 227
Query: 251 LDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATST 310
LD + EIR T FN + D+FY+ +E G+VY +SK ++ ++ F+HL + +E+ L+ +
Sbjct: 228 LD-ESDEIRATAFNDLADKFYQQLEEGKVYYVSKARIQQSKPQFSHLSHPYELALDRDTV 286
Query: 311 VDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRR 369
++ C + + +PK F+F +++IE+AE NSIVDVIG++ VNP I K+ G RR
Sbjct: 287 IEECFDTSN-VPKIHFNFTKLNDIENAEANSIVDVIGVLKEVNPVFQITAKSTGKPFDRR 345
Query: 370 ILNLKDTSGRSVELTLWG----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIG 425
+ + D S ++ + LW DF EG V++ K K+ DF+G+S+
Sbjct: 346 NITIVDDSNVAITVGLWNTSAVDFTVSEG------------SVIAFKGCKIQDFAGRSLT 393
Query: 426 TIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGL 485
+ + +NPD EA+ L+ WFD+ G + S+ E +A K++ Q + E L
Sbjct: 394 LTHAGSMMVNPDTPEAYSLKGWFDNKGVHENFKSLKNENSATKNAFNSRKSILQAQEENL 453
Query: 486 GRSEKPDWVTVRAFITFIKSDSFCYTACPLMI--GDRQ----CNKKVT-QSGNRWQCDRC 538
G SEKPD+ ++A I F K+++FCY AC ++ G +Q CN+KV QS W+C++C
Sbjct: 454 GMSEKPDFFNIKATINFFKTENFCYPACNNVLDSGSQQLSNTCNRKVVEQSDGTWRCEKC 513
Query: 539 NQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQ--DDVRFG 596
+ E YRY+L + D TG W+T F + +++ G PA EL LK + ++ F
Sbjct: 514 DMNFAEPHYRYILNCSVMDSTGQLWITLFDQEAQKLFGIPAGELLKLKEQQMNGENSEFQ 573
Query: 597 EIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLIS 648
+II + FRLK +++ Y RV+ V+ V++++E +L+ +S
Sbjct: 574 KIINDVTMKGFNFRLKARQDSYNGVLRVRYQVLSISDVDFNAECDHLITQLS 625
>gi|255715099|ref|XP_002553831.1| KLTH0E08118p [Lachancea thermotolerans]
gi|238935213|emb|CAR23394.1| KLTH0E08118p [Lachancea thermotolerans CBS 6340]
Length = 624
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 161/451 (35%), Positives = 269/451 (59%), Gaps = 25/451 (5%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I I L+PYQ W IKARV+ KGD++ ++N RG+GK+F+ +LLD + GEIR T F+ V
Sbjct: 190 IFAIEQLSPYQNMWTIKARVSFKGDIKTWSNQRGEGKLFNVNLLD-NSGEIRATTFSENV 248
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D+FY +++ G+VY +SK ++P++ F++L + +E+ L+ + V+ C ++ D +PK FS
Sbjct: 249 DKFYNLLQEGKVYYVSKARIQPSKPQFSNLAHPYELQLDRDTVVEECFDDVD-VPKMNFS 307
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
F ++ +ES E NSIVDVIGI+ +VNP I K G RR + L D SG SV + LWG
Sbjct: 308 FVKLNTMESQEANSIVDVIGIIRTVNPPFEITSKAGKRFDRRDIILVDDSGYSVNVGLWG 367
Query: 388 DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREW 447
Q L+ + G V+++K G+V DF+GK + ++ + +P+ EA+ ++ W
Sbjct: 368 Q------QALEFNLPEG--SVVAIKGGRVTDFNGKGLSMGFNSTMHPSPEVPEAYAIKGW 419
Query: 448 FDSGGKNAATVSISREIAAGGAK------NEIHKTVSQIKNEGLGRSEKPDWVTVRAFIT 501
+DS G+NA S+ +E AGG N I ++++ + + LG SE+ D+ +++A ++
Sbjct: 420 YDSVGRNAQFHSLKQEPGAGGGNAARFIANRI--SIAKAQADNLGMSERGDYFSIKAAVS 477
Query: 502 FIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTG 560
+++ D+ Y AC + CNKKV + + W+C++C+ E +RY+L + D+TG
Sbjct: 478 YLRVDNLAYPAC----ANENCNKKVIEEPDGTWRCEKCDANHPEPQFRYMLTVSVLDETG 533
Query: 561 LTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGD 620
W+T F E E++LG A M+KY+ D +F I + NQY FR++ + + Y D
Sbjct: 534 QIWLTLFNEQAEQLLGVDANS--MVKYKESDPSKFARITQKIQMNQYDFRVRARADNYND 591
Query: 621 EQRVKITVIRADQVNYSSESRYLLDLISKSF 651
E R++ T + + +E+ +L + + K F
Sbjct: 592 ETRIRYTAANVHNLRFGAEAEFLAEELGKVF 622
>gi|328788416|ref|XP_003251128.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
2 [Apis mellifera]
Length = 590
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 209/651 (32%), Positives = 334/651 (51%), Gaps = 96/651 (14%)
Query: 12 LINGGDVNSKPLVQVMDIKLIGSTQ--ERYRFLISDSVSTQH-AMLATQLNDRVKTGQVK 68
++NG DV+ KP++Q++ K + S+ ERYR L+SD MLATQLN + +
Sbjct: 12 IMNGIDVD-KPVLQILGHKKLSSSSSGERYRLLVSDGKRVNSFTMLATQLNSMITENILT 70
Query: 69 KGSVVQLIDYICSTVQN----RKIIVVLNMETIILDCE---PIGNPKIFSESELTAQKTI 121
+ S+ Q+ Y S V N ++++V+LN++ + E IGNP + +E
Sbjct: 71 EFSICQINRYAISMVNNAGKQKRVMVILNIDLKVPGDEVGHKIGNP---TNAEADGDSK- 126
Query: 122 PSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQP 181
P + Q + N PN N+Q S T N S P
Sbjct: 127 PQAQIAQSAQTN--LKPN---HNMQQSSTNNI------------------------STTP 157
Query: 182 TVQ-PPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAR 240
V PYQ RW IKARV +K ++R ++N+R
Sbjct: 158 IVALSPYQ------------------------------NRWVIKARVVSKSNIRTWSNSR 187
Query: 241 GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNE 300
G+GK+FS DL+D + GEIR T F D+FY+++E+G+VY IS+ +LKPA K FN+LKN+
Sbjct: 188 GEGKLFSMDLID-ESGEIRCTAFRNECDKFYDMLEIGKVYYISRATLKPANKQFNNLKND 246
Query: 301 WEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIV-ISVNPSVPIL 359
+E+ L S + C + D IP QF F I++I E N I++++GIV S + +
Sbjct: 247 YEMTLIGDSEIIPCHDSGDDIPSLQFDFVSINDINKKEQNDIMNILGIVKYSGDLQILTS 306
Query: 360 RKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDF 419
R +G E ++R ++L D S V+++LWG E D PVL+VK ++ +F
Sbjct: 307 RNSGRELRKRDVSLVDESNTMVKVSLWGSQA--------EEFDGSSNPVLAVKGARITEF 358
Query: 420 S-GKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVS 478
+ GK++ T+ ST L I+PD AH LR WF++ G+N S+S+ + +E+ T
Sbjct: 359 NGGKNLSTLSSTVLQIDPDLPAAHRLRGWFNTMGRNEEATSLSKPFGSTTGVSELWITFQ 418
Query: 479 QIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKK-VTQSGNRWQCDR 537
+ K+ LG + D TV+A + I+ ++ Y ACP C KK V Q+ + ++C++
Sbjct: 419 EAKDMELGY-KNSDIYTVKATLNMIRMENAIYKACP----SENCKKKLVDQANDMYRCEK 473
Query: 538 CNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDV-RFG 596
C++E YR L + D T WVTAF + E+IL A+EL LK ++D+ +
Sbjct: 474 CDKEYPNYRYRLLANISLADWTDNQWVTAFNDEAEKILSSTAQELGELK---ENDIDAYS 530
Query: 597 EIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
E F ++F++++K E++GDE R++ T + ++Y + +L+ I
Sbjct: 531 EKFSEATFKSFIFKIRVKVEVFGDENRLRATCLGVSPMDYKLYNNHLITQI 581
>gi|400598555|gb|EJP66264.1| replication factor-a protein 1 [Beauveria bassiana ARSEF 2860]
Length = 597
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 205/663 (30%), Positives = 338/663 (50%), Gaps = 95/663 (14%)
Query: 5 LTPNSISLI-NGGDVNSK----PLVQVMDIKLIGSTQE---RYRFLISDSVSTQHAMLAT 56
L+ S+ LI N D +K P++Q + +K + + + RYR ++SD MLAT
Sbjct: 7 LSKGSLDLIFNDPDKAAKEFPVPVMQCLQVKQMAPSAQGGDRYRLVMSDGQHYVQTMLAT 66
Query: 57 QLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETI----ILDCEPIGNPKIFSE 112
Q N V ++ +G + ++ Y + ++ + I+++L++E I ILD IG P
Sbjct: 67 QANHVVHEDKLVRGCIARIKQYTPNNLKGKNILIILDIEVIENYGILD--KIGEPSAVES 124
Query: 113 SELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNA 172
A+ TI N+ G + P
Sbjct: 125 R--AAETTIAGNDF---------------------YGVKKEEKP---------------- 145
Query: 173 GSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGD 232
P P +P + N+ I PI L+P+ +W IKARVT+K D
Sbjct: 146 -------TPQQSMPSRPAMHAGNN-----------IYPIEGLSPFSHKWTIKARVTSKSD 187
Query: 233 LRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQ 291
++ ++ A G+GK+FS +LLD + GEI+ T FN D FYE+++ G VY IS + A+
Sbjct: 188 IKTWHKATGEGKLFSVNLLD-ESGEIKATGFNDQCDAFYELLQEGSVYYISTPCRVNLAK 246
Query: 292 KNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVIS 351
K F++L N++E+ E + ++ E+ ++P+ +F+F I E++S E ++ VD+IG++
Sbjct: 247 KQFSNLPNDYELAFERDTVIEK-AEDQTNVPQVRFNFSTIEELQSVEKDNTVDIIGVLKE 305
Query: 352 VNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLS 410
I+ +K G Q+R L + D +G SV +T+WG K D V++
Sbjct: 306 AGEVSEIVSKKTGAPYQKRELTMVDDTGYSVRVTIWG--------KTASSFDAQPESVIA 357
Query: 411 VKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKN---AATVSISREIAAG 467
K KV+DF GKS+ + S + ++PD +AH L+ W+DS G+N A +++ AA
Sbjct: 358 FKGTKVSDFGGKSLSLLSSGTISVDPDIPDAHRLKGWYDSSGRNDTFATHQNLASVGAAA 417
Query: 468 GAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT 527
G +EI KT++Q+K E LG ++ + T++A I F+K D+FCY AC L G CNKKV
Sbjct: 418 GRNDEI-KTIAQVKEENLGVDDQA-YYTIKATIVFVKQDNFCYPAC-LSQG---CNKKVQ 471
Query: 528 QSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLK 586
G+ W+C++CN D+ +YRY+L + D T W++ F +SG I+G A EL LK
Sbjct: 472 DMGDGTWRCEKCNLSHDKPEYRYVLSFNVADHTSHQWLSCFDDSGRAIVGMSADELMELK 531
Query: 587 YELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDL 646
D+ +F + + FR + + + YG+ QRV+ V+ A +++ SE L ++
Sbjct: 532 E--NDEAKFLAAFEAVNCKKLQFRCRARMDNYGEVQRVRYQVMTASFLDFKSEGAKLAEM 589
Query: 647 ISK 649
I +
Sbjct: 590 IKQ 592
>gi|448119751|ref|XP_004203808.1| Piso0_000828 [Millerozyma farinosa CBS 7064]
gi|359384676|emb|CCE78211.1| Piso0_000828 [Millerozyma farinosa CBS 7064]
Length = 629
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 201/653 (30%), Positives = 337/653 (51%), Gaps = 82/653 (12%)
Query: 21 KPLV-QVMDIKLI--------GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGS 71
KP+V QV +IK+I G + +YR L++D + H ++ ++ + +K S
Sbjct: 30 KPIVVQVSNIKIIDQSPDGGNGESSIKYRVLLNDGQYSLHGLITSECVPYCEANGFRKTS 89
Query: 72 VVQLIDYICSTVQNRKIIVVLNMETIILDCEPI-GNPKIFSESELTAQKTIPSNNLPQPV 130
V+ + DY T Q + I+++ ++E I GN I S A+ P + + V
Sbjct: 90 VISVQDYNLVTTQ-KHIMIINSLEVKHQTSTKITGN--ITSCDAYYAEH--PDEDFLELV 144
Query: 131 RVNNYSAPNSGTFNLQNSGTFNSQNPGSFS-TPNSGTFRAPNAGSIVRSFQPTVQPPYQP 189
+ N S Q P + S +P++GT AP S+ + Q
Sbjct: 145 KRNQIGDSFSD---------HKVQPPSNRSVSPSNGT--APKGASMFQQRQ--------- 184
Query: 190 PPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFD 249
+ I L+PYQ W IKARV+ KGD+R+++NARG+GK+F+ +
Sbjct: 185 ------------------VNAIEQLSPYQNHWTIKARVSYKGDIRKWSNARGEGKLFNVN 226
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
LD + EIR T FN + D+FY+ +E G+VY +SK ++ ++ F+HL + +E+ L+ +
Sbjct: 227 FLD-ESDEIRATAFNDLADKFYQQLEEGKVYYVSKARIQQSKPQFSHLSHPYELALDRDT 285
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQR 368
++ C + + +PK F+F +++IE+AE NSIVDVIG++ VNP I K+ G R
Sbjct: 286 VIEECFDTSN-VPKIHFNFTKLNDIENAEANSIVDVIGVLKEVNPVFQITAKSTGKPFDR 344
Query: 369 RILNLKDTSGRSVELTLWG----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI 424
R + + D S ++ + LW DF EG V++ K K+ DF+G+S+
Sbjct: 345 RNITIVDDSNVAITVGLWNTSAVDFTVSEG------------SVIAFKGCKIQDFAGRSL 392
Query: 425 GTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEG 484
+ + +NPD EA+ L+ WFD+ G + S+ E + K++ Q + E
Sbjct: 393 TLTHAGSMMVNPDTPEAYSLKGWFDNKGVHENFKSLKNENSTTKNAFSSRKSILQAQEEN 452
Query: 485 LGRSEKPDWVTVRAFITFIKSDSFCYTACPLMI--GDRQ----CNKKVT-QSGNRWQCDR 537
LG SEKPD+ ++A I F K+++FCY AC ++ G +Q CN+KV QS W+C++
Sbjct: 453 LGMSEKPDFFNIKATINFFKTENFCYPACNNVLDSGSQQLSNTCNRKVVEQSDGTWRCEK 512
Query: 538 CNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQ--DDVRF 595
C+ E YRY+L + D +G W+T F + +++ G PA EL LK + ++ F
Sbjct: 513 CDMNFAEPHYRYILNCSVMDSSGQLWITLFDQEAQKLFGTPAGELLKLKEQQMNGENSDF 572
Query: 596 GEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLIS 648
+II ++ FRLK +++ Y RV+ V+ V++++E +L+ +S
Sbjct: 573 QKIINDVTMKEFNFRLKARQDSYNGVLRVRYQVLSISDVDFNAECEHLITQLS 625
>gi|322710190|gb|EFZ01765.1| replication factor-A protein 1 [Metarhizium anisopliae ARSEF 23]
Length = 595
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 202/636 (31%), Positives = 322/636 (50%), Gaps = 82/636 (12%)
Query: 22 PLVQVMDIKLIGSTQ---ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
P++Q + +K +G++ ERYR ++SD AMLATQ N + G++ +GS ++ Y
Sbjct: 29 PVMQCLQVKPMGASATGGERYRLVMSDGDHYVQAMLATQANHVIHEGKLVRGSFARVKQY 88
Query: 79 ICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAP 138
++ + I+V ILD E I L Q+ I S P V N
Sbjct: 89 NPQNLKGKNILV-------ILDLEVI--------ESLGVQEKIGS---PTAVETNEAKE- 129
Query: 139 NSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGP 198
T S F G+ +P P P + G
Sbjct: 130 ---------------------QTIASNDFY----GTKKEESKPQAMPSR---PAVHDGG- 160
Query: 199 ILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEI 258
I PI L+P+Q +W IKARVT K D++ ++ G+GK+FS +LLD + GEI
Sbjct: 161 --------NIYPIEGLSPFQHKWTIKARVTMKSDIKTWHKPTGEGKLFSVNLLD-ESGEI 211
Query: 259 RVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVDLCTEE 317
+ T FN D FY++++ G VY IS + A+K F++L N++EI E + ++ E+
Sbjct: 212 KATGFNDQCDAFYDLLQEGSVYYISSPCRVNLAKKQFSNLPNDYEITFERDTRIEK-AED 270
Query: 318 DDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK-NGMETQRRILNLKDT 376
++P+ +F+F I E+++ E ++ VDVIG++ V I K +G Q+R L L D
Sbjct: 271 QTNVPQVRFNFCTIQELQNVEKDNTVDVIGVLKDVGEVSEITSKASGKPFQKRELTLVDD 330
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP 436
+G SV +T+WG N D V++ K KV+DF GKS+ + S + ++P
Sbjct: 331 TGYSVRVTVWGKTANS--------FDANPESVVAFKGTKVSDFGGKSLSLLSSGTMTVDP 382
Query: 437 DFAEAHELREWFDSGGKN---AATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDW 493
D +AH L+ W+DS G+ A +++ AGG NE +KT++Q+K E LG + P +
Sbjct: 383 DIPDAHRLKGWYDSSGRTDNFATHQNMASMGNAGGRANE-NKTIAQVKEENLGM-DAPAY 440
Query: 494 VTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQA 553
+++A I F+K ++FCY AC CNKKV ++G+ W C++C+ + DYRY++
Sbjct: 441 YSIKATIVFVKQENFCYPAC----SKEGCNKKVVETGDGWYCEKCSVSHERPDYRYIVSL 496
Query: 554 QIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKI 613
+ D T W+ F E+GE I G A +L LK DD +F + + FR +
Sbjct: 497 NVADHTSHQWLNCFNETGEAIFGMSANQLMELKD--NDDAKFMAAFEAVNCKKLNFRCRA 554
Query: 614 KEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
K + +GD QRV+ ++ A +++ SE L +LI +
Sbjct: 555 KMDNFGDTQRVRYQIMSAAFLDFKSEGNKLAELIKQ 590
>gi|255723748|ref|XP_002546803.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134694|gb|EER34248.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 620
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 199/647 (30%), Positives = 330/647 (51%), Gaps = 67/647 (10%)
Query: 14 NGGDVNSKPLV-QVMDIKLIG--STQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKG 70
+G D P++ Q+ +IK + + ++YR L++D V + H ++ N+ +K ++
Sbjct: 15 DGYDKVQMPMILQITNIKSVDLPNDVKKYRILLNDGVYSTHGLIDETCNEYIKNNNCQRY 74
Query: 71 SVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPV 130
S+VQ+ + Q + V+ N+E + E P I P+
Sbjct: 75 SIVQVNSFSIFATQ-KHFFVIKNLEILSPTSEKSSVPLI-------------------PL 114
Query: 131 RVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPP 190
PN G L +S P + S P + T + V+ FQ V+ QP
Sbjct: 115 DTYFAEHPNEGHLTLTKKSEGDSPAPATPSIPQATT-------ASVQPFQAQVK---QPV 164
Query: 191 PNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDL 250
P N + AP R + I ++PYQ W IKARV+ KGDLR ++N++G+GKVFS +
Sbjct: 165 P--ANTAASARGPAP-RTLSIELISPYQNNWTIKARVSYKGDLRTWSNSKGEGKVFSVNF 221
Query: 251 LDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATST 310
LD + EI+ + FN +R Y +E G+VY ISK ++ A+K FN L + +E+ L+ +
Sbjct: 222 LD-ESDEIKASAFNETAERAYRSLEEGKVYYISKARVQAARKKFNTLSHPYELTLDRDTE 280
Query: 311 VDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRR 369
+ C +E D +PK F+F + ++++ E NSI+DVIG++ +V P I K+ G E RR
Sbjct: 281 ITECFDESD-VPKLNFNFVKLDQVQNLEANSIIDVIGVLKTVLPPFTITAKSTGKEFNRR 339
Query: 370 ILNLKDTSGRSVELTLWG----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIG 425
+++ D +G SVEL LW DF +EG V++ K KV DF+GK++
Sbjct: 340 NISIVDETGFSVELGLWNNTAMDFSVEEGT------------VVAFKGCKVTDFNGKTLS 387
Query: 426 TIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGL 485
+ + NP E+ L+ W+D+ G N ++ + +G + +++Q E +
Sbjct: 388 LTQAGSIVPNPGTPESFTLKGWYDNVGVNEQFKTLKTDKNSGDRIAQ-RVSIAQALEEHV 446
Query: 486 GRSEKPDWVTVRAFITFIKSDSFCYTACPLMI--GD-----RQCNKKVTQSGN--RWQCD 536
G +KPD+ +V+A ITF K D+F Y AC + GD + CNKK+ + W+C+
Sbjct: 447 GTGDKPDYFSVKASITFCKPDNFAYPACTNQVQHGDGSRPPQLCNKKLIYQDHDGTWRCE 506
Query: 537 RCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFG 596
+C+ D+ YRY+L + D TG W+T F E +++L A EL K E D
Sbjct: 507 KCDANYDQAAYRYILSCSVTDSTGQMWLTLFDEQAKKLLDIDATELQRKKEENPDAA--S 564
Query: 597 EIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYL 643
I S +F +++FR++ +++ Y DE + + +NY+SE+ +L
Sbjct: 565 AIFTSVLFKEFVFRVRARQDTYNDELKTRYQAAGLYDINYTSEAEFL 611
>gi|194904079|ref|XP_001980997.1| GG17466 [Drosophila erecta]
gi|190652700|gb|EDV49955.1| GG17466 [Drosophila erecta]
Length = 603
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 207/657 (31%), Positives = 325/657 (49%), Gaps = 85/657 (12%)
Query: 3 VNLTPNSISLINGGDVNSKPLVQVMDIKLIGST--QERYRFLISDS-VSTQHAMLATQLN 59
+L+ I+ I G+V P++Q++ IK I S ERYR LISD +AMLA+QLN
Sbjct: 4 ASLSTGVIARIMHGEVVDGPVLQILAIKKINSAADSERYRILISDGKYFNSYAMLASQLN 63
Query: 60 DRVKTGQVKKGSVVQLIDYICSTV----QNRKIIVVLNMETIILDCE---PIGNPKIFSE 112
G++++ ++VQL Y+ S V ++++++ + + E IG P +
Sbjct: 64 VMQHNGELEEFTIVQLDKYVTSLVGKDGAGKRVLIISELTVVNPGAEVKSKIGEPVTYEN 123
Query: 113 SELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNA 172
+ Q P P NS + PG + N + N+
Sbjct: 124 A--AKQDLAPKAAAPS------------------NSKPVAKKEPGHNNNNNVVMNSSINS 163
Query: 173 GSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGD 232
G H PI++L+PYQ +W IKARVT+K
Sbjct: 164 G--------------------MTH-------------PISSLSPYQNKWVIKARVTSKSG 190
Query: 233 LRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQK 292
+R ++NARG+GK+FS DL+D + GEIR T F D+F+++I+V VY ISK LKPA K
Sbjct: 191 IRTWSNARGEGKLFSMDLMD-ESGEIRATAFKEQCDKFFDLIQVDSVYYISKCQLKPANK 249
Query: 293 NFNHLKNEWEIFLEATSTVDLCTE-EDDSIPKQQFSFRHISEIESAENNSIVDVIGIVIS 351
++ L N +E+ + V LC + +DD IP+ +++ IS++ EN + VD IGI
Sbjct: 250 QYSSLNNAYEMTFSGETVVQLCDDTDDDPIPEIKYNLIPISDVSGMENKAAVDTIGICKE 309
Query: 352 VNPSVP-ILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLS 410
V + R E ++R + L D S ++ LTLWGD +Q PV+
Sbjct: 310 VGELQSFVARTTNKEFKKREITLVDMSNSAISLTLWGDEAVNFDGHVQ--------PVIL 361
Query: 411 VKSGKVNDFSGKSIGTIPSTQLF-INPDFAEAHELREWFDSGGKNAATVSISREIAAGGA 469
VK ++N+F+G ++ + INPD EAH+LR WFD+GG + +S G
Sbjct: 362 VKGSRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRGWFDNGGGDNVANMVSARTGGGNF 421
Query: 470 KNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQS 529
E T+ + LG +KPD+ +A + +K ++ Y ACP CNKKV
Sbjct: 422 STE-WMTLKDARARNLGSGDKPDYFQCKAVVHIVKQENAFYRACP----QSDCNKKVVDE 476
Query: 530 GN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYE 588
GN +++C++CN YR L+ I D T WV++F E GE++LG ++E +
Sbjct: 477 GNDQFRCEKCNALFPNFKYRLLINMSIGDWTSNRWVSSFNEVGEQLLGHTSQE---VGEA 533
Query: 589 LQDDVRFGEIIRSRV-FNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
L++D E I S + F ++F+L+ K E++GD R K+TV +N+ +++LL
Sbjct: 534 LENDPAKAEQIFSALNFTSHIFKLRCKNEVFGDMTRNKLTVQSVAPINHKEYNKHLL 590
>gi|327283810|ref|XP_003226633.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Anolis carolinensis]
Length = 607
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 217/662 (32%), Positives = 335/662 (50%), Gaps = 78/662 (11%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLIGSTQ--ERYRFLISDSVSTQHA-MLATQ 57
M + L+ +I+ I G+ K ++Q+++I+ I + RYR L+SD V+T + MLATQ
Sbjct: 1 MALRLSEGAIASIMQGENVVKAVLQLINIRPITTANGPPRYRMLMSDGVNTLSSFMLATQ 60
Query: 58 LNDRVKTGQVKKGSVVQLIDYICSTVQN-RKIIVVLNMETII---LDCEPIGNPKIFSES 113
LN V + ++ Q+ +I +T+++ RK+++V++ME + IGNP + E
Sbjct: 61 LNSMVDEQSLAVNTICQINRFIVNTLKDGRKVVIVMDMEVLRPGDASAAKIGNPVQYVEV 120
Query: 114 ELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
+ P P + P G + S + P PN G
Sbjct: 121 Q------------PLP------AVP--GAASAVASAEEEHRGPPPPKMPNKG-------- 152
Query: 174 SIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDL 233
P Q P + A+++PIA+LNPYQ +W I ARVT KG +
Sbjct: 153 -------PASQFLSTP------------GGSQAKVVPIASLNPYQSKWTICARVTQKGQI 193
Query: 234 RRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKN 293
R ++N+RG+GK+FS +L+D + GEIR T FN VD+FY +IE+ +VY SKG LK A K
Sbjct: 194 RTWSNSRGEGKLFSIELVD-ESGEIRATAFNDQVDKFYPLIEMNKVYYFSKGQLKVANKQ 252
Query: 294 FNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVN 353
+ +KN++EI ++V C E+ +P QF F I+E+E ++IVDVIG+ +
Sbjct: 253 YTSVKNDYEITFINDTSVIPC-EDAQHLPSVQFDFVSIAELERTSKDAIVDVIGVCKAYE 311
Query: 354 PSVPI-LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVK 412
+ ++ E +R L+L D+SG+ V + LWG + D PV+++K
Sbjct: 312 EVTKLTMKTTNREVSKRDLHLVDSSGKMVSVALWGQEADN--------FDGSRQPVVAIK 363
Query: 413 SGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNE 472
+V+DF G+S+ + S+ L +NPD EA LR WFDS GK+ T SIS + G +
Sbjct: 364 GARVSDFGGRSLSVLSSSTLVVNPDRPEAFRLRGWFDSQGKHLETSSISNGWSGGSGGSG 423
Query: 473 IH------KTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKV 526
KT+ + K LG+ EK D+ + + +++ + Y ACP CNKK+
Sbjct: 424 GGGSGPNWKTLRESKTGNLGQGEKADYYSCIGTVIYLRKEKCLYKACP----SPDCNKKL 479
Query: 527 TQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYML 585
N ++C++CN E +R +LQ I D WVT FQE+ E ILG A L L
Sbjct: 480 VDEQNGLYRCEKCNLETPNFKHRMILQVNIADFQDQQWVTCFQEAAETILGQNATYLGEL 539
Query: 586 KYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLD 645
K D+ F II F + FR++ K E++ DE R+K T + VN+ L+
Sbjct: 540 KE--TDEHAFNSIIEKSFFATFEFRVRAKMEMFNDELRLKTTALEVKPVNHKEYGHRLVQ 597
Query: 646 LI 647
I
Sbjct: 598 SI 599
>gi|156843819|ref|XP_001644975.1| hypothetical protein Kpol_1025p37 [Vanderwaltozyma polyspora DSM
70294]
gi|156115629|gb|EDO17117.1| hypothetical protein Kpol_1025p37 [Vanderwaltozyma polyspora DSM
70294]
Length = 618
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 269/454 (59%), Gaps = 30/454 (6%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I I L+PYQ W IKARV+ KG+++ ++N +G+GK+FS + LD+ GEIR T FN +
Sbjct: 183 IFAIEQLSPYQNVWTIKARVSYKGEIKTWHNQKGEGKLFSVNFLDT-SGEIRATAFNDMA 241
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
+F E+++ G+VY +SK L+PA+ F++L + +E+ L+ + ++ C +E + +PK FS
Sbjct: 242 TKFNEVLQEGKVYYVSKARLQPAKPQFSNLSHPYELSLDRETVIEECQDESN-VPKTHFS 300
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
F + I++ E +S VDV+G++ +VNP + K G + RR + + D SG S+ + LW
Sbjct: 301 FIKLDAIQNQEASSTVDVLGVIQTVNPHFELTSKAGKKFDRRDITIVDDSGFSISVGLWN 360
Query: 388 ----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHE 443
DF EG ++++K +V+DF GKS+ ++ L NP+ EA+
Sbjct: 361 QQALDFNLPEG------------SIVAIKGVRVSDFGGKSLSMGFNSTLIPNPEIPEAYS 408
Query: 444 LREWFDSGGKNAATVSISREIAAGGAKNEIHK------TVSQIKNEGLGRSEKPDWVTVR 497
L+ W+D+ GKN S+++E+ + + + K T+++ +++ LG+SEK D+ +V+
Sbjct: 409 LKGWYDTSGKNENFSSLNQEVGGAPSSDNLMKFISQRTTIAKAQSDNLGKSEKGDFFSVK 468
Query: 498 AFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQD 557
A ++F+K D+F Y AC + CNKKV + W+C+RC++ ++ ++RY+L I D
Sbjct: 469 ASVSFLKVDNFAYPACT----NADCNKKVIEHNGSWRCERCDKTSEQPEWRYMLTISIMD 524
Query: 558 QTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEEL 617
+TG W+T F + +++LG A L LK D F + +S N Y FR++ +E+
Sbjct: 525 ETGQMWLTLFNDQAKQLLGIDANSLIELKDS--DPDAFSKKTQSIQMNPYDFRIRAREDN 582
Query: 618 YGDEQRVKITVIRADQVNYSSESRYLLDLISKSF 651
Y D+ R++ TV ++NY ES +L +SK+
Sbjct: 583 YNDQTRIRYTVSNLHKLNYKVESDFLASELSKAL 616
>gi|407928380|gb|EKG21239.1| Nucleic acid binding OB-fold tRNA/helicase-type [Macrophomina
phaseolina MS6]
Length = 616
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 192/643 (29%), Positives = 339/643 (52%), Gaps = 67/643 (10%)
Query: 15 GGDVNSKPLVQVMDIKLIGST--QERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSV 72
G + +P++Q + IK + S +ERYR ++SD + +ML+ Q N+ + G +KKGS+
Sbjct: 21 GPEAVGEPILQCVQIKHMDSKAGEERYRIVLSDVDNFIQSMLSQQKNNLITEGLLKKGSM 80
Query: 73 VQLIDYICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQKTIPSN--NLPQ 128
+++ Y ++ RKI VVL+++ + + E IGNP + E+ K P Q
Sbjct: 81 IRMKSYNPQVIKERKIFVVLDLDVLSEYGELEKIGNP-VGLEANNAGPKVEPKAEPKTEQ 139
Query: 129 PVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQ 188
P ++ G + S+ P + R T+
Sbjct: 140 PA-------------DIGGGGFYGSKPP------------------VKREQHSTLPSRNA 168
Query: 189 PPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSF 248
PPP A++ PI AL+PY +W IKAR K D++ ++N G+GK+FS
Sbjct: 169 PPPGL------------AQLFPIEALSPYTHKWTIKARCVHKSDIKTWHNKNGEGKLFSV 216
Query: 249 DLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEAT 308
+LLD + GEIR T F D+ Y+ G VY IS S+K A+K F+++ N++E+ +
Sbjct: 217 NLLD-ESGEIRATGFKEQCDQLYDTFREGGVYYISNCSVKLAKKQFSNVNNDYELTFQND 275
Query: 309 STVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMET-Q 367
S V+ ++ DS+P+ +++F HI ++++ E N+ +D IG++ V I+ K + Q
Sbjct: 276 SIVEP-ADDPDSVPQVRYNFTHIGDLQNVEPNTTIDTIGVLKDVGEVSEIISKTTSKPYQ 334
Query: 368 RRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTI 427
+R L + D S SV LT+WG + D V++ K KV+DF G+S+ +
Sbjct: 335 KRELTIVDDSMTSVRLTIWG--------PTAQGFDASPESVVAFKGVKVSDFGGRSLSLL 386
Query: 428 PSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGR 487
S + INPD EAH+L+ W+D+ G+N S ++ + G +++ +KT++Q+ +E +G
Sbjct: 387 SSGSMNINPDIDEAHKLKGWYDAQGRNDQFTS-HQQSSTGTSRSRKYKTIAQVNDEQIGM 445
Query: 488 SEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECD 546
S++P++ ++A I ++K D+F Y AC CNKKV + + W+C++C+ + +
Sbjct: 446 SDQPEYFDLKATIVYVKHDNFAYPAC----ASAGCNKKVVEINPGEWRCEKCDITHTKPE 501
Query: 547 YRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQ 606
YRY++ + D TG W++ F +SG+ I+G A EL ++ ++ +F +
Sbjct: 502 YRYIMSCNVSDHTGQLWLSCFDDSGKIIMGKSADELVEIRDNEENPSKFEQSFVDATCKT 561
Query: 607 YLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
++F +K K + + D+QRV+ V A ++N S E L++ + +
Sbjct: 562 FIFNVKAKMDTFQDQQRVRYQVSSAKELNLSFECARLIETLKQ 604
>gi|380486564|emb|CCF38620.1| replication factor-a protein 1 [Colletotrichum higginsianum]
Length = 607
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 192/637 (30%), Positives = 332/637 (52%), Gaps = 72/637 (11%)
Query: 22 PLVQVMDIKLI----GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLID 77
P++Q + IK + G ERYR ++SD + MLATQ+N + ++ + +V++
Sbjct: 29 PVLQCLQIKPLAAQTGGGAERYRIVLSDVNNYVQCMLATQVNHVIHENKLVRNCIVRITQ 88
Query: 78 YICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSA 137
Y ++V+ + I+++L +E I E +G P E PQ
Sbjct: 89 YQANSVKGKNILIILGLEVI----EQLGTPDKIGE--------------PQ--------- 121
Query: 138 PNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHG 197
F ++ P P + T N + + + T P Q P+ R+ G
Sbjct: 122 ------------AFEAKPPA----PANTTIGGQNFYGVKQ--EETKPKPQQSIPS-RSAG 162
Query: 198 PILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGE 257
+ I PI AL+PY +W IKARVT K D+R ++ G+GK+FS +LLD + GE
Sbjct: 163 GATGQHGSSNIYPIEALSPYAHKWTIKARVTQKSDIRTWHKPSGEGKLFSVNLLD-ESGE 221
Query: 258 IRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE 316
I+ T FN VD++Y++++ G VY IS ++ A+K F +L N++E+ E + ++ E
Sbjct: 222 IKATGFNEQVDQYYDLLQEGGVYYISSPCKVQLAKKQFTNLPNDYELTFERDTQIEK-AE 280
Query: 317 EDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKD 375
+ ++P+ +F+F +I E++ E ++ VD+IG++ V+ I+ K+ G ++R L L D
Sbjct: 281 DQSNVPQVRFNFCNIQELQEVEKDATVDIIGVLKDVDEVSQIVSKSTGKPYEKRELTLVD 340
Query: 376 TSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFIN 435
+ SV +T+WG K D V++ K KV+DF G+S+ + S + I+
Sbjct: 341 DTNYSVRVTIWG--------KSATNFDAKPESVVAFKGTKVSDFGGRSLSLLSSGTMSID 392
Query: 436 PDFAEAHELREWFDSGGKNAATVSISREIAAGGA--KNEIHKTVSQIKNEGLGRSEKPDW 493
PD +AH L+ W+DS G+N + + ++ G A + + K++ Q+K E LG E+ D+
Sbjct: 393 PDIPDAHRLKGWYDSSGRNDTFSNHNNMVSMGNATGRKDQDKSILQVKEENLGM-EQQDY 451
Query: 494 VTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSG-NRWQCDRCNQEIDECDYRYLLQ 552
++A I +IK D+F Y AC + CNKKVT++G W+C++C+ + +YRY++
Sbjct: 452 FNLKATIVYIKQDNFAYPACM----NEGCNKKVTETGEGAWRCEKCDVSHPKPEYRYIMS 507
Query: 553 AQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLK 612
+ D T W++ F + G I+G A +L L+ E D+ + + + FR +
Sbjct: 508 VNVCDHTNQLWLSCFDDVGRVIMGMSADQLTNLREE--DETKMAQAFEDANCRKLNFRCR 565
Query: 613 IKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
K + +G+ QRV+ V+ A ++Y +E L DLI +
Sbjct: 566 AKMDTFGESQRVRYQVMSASPIDYKAEGAKLADLIKQ 602
>gi|323306166|gb|EGA59898.1| Rfa1p [Saccharomyces cerevisiae FostersB]
Length = 455
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 166/456 (36%), Positives = 265/456 (58%), Gaps = 32/456 (7%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I I L+PYQ W IKARV+ KG+++ ++N RGDGK+F+ + LD+ GEIR T FN
Sbjct: 18 IFAIEQLSPYQNVWTIKARVSYKGEIKTWHNQRGDGKLFNVNFLDT-SGEIRATAFNDFA 76
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
+F EI++ G+VY +SK L+PA+ F +L + +E+ L+ + ++ C +E + +PK F+
Sbjct: 77 TKFNEILQEGKVYYVSKAKLQPAKPQFTNLTHPYELNLDRDTVIEECFDESN-VPKTHFN 135
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
F + I++ E NS VDV+GI+ ++NP + + G + RR + + D SG S+ + LW
Sbjct: 136 FIKLDAIQNQEVNSNVDVLGIIQTINPHFELTSRAGKKFDRRDITIVDDSGFSISVGLWN 195
Query: 388 ----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHE 443
DF EG V ++K +V DF GKS+ S+ L NP+ EA+
Sbjct: 196 QQALDFNLPEGS------------VAAIKGVRVTDFGGKSLSMGFSSTLIPNPEIPEAYA 243
Query: 444 LREWFDSGGKNAATVSISREIAAGG-AKNEIHK------TVSQIKNEGLGRSEKPDWVTV 496
L+ W+DS G+NA +++ +E GG + + K T+++ + E LGRSEK D+ +V
Sbjct: 244 LKGWYDSKGRNANFITLKQEPGMGGQSAASLTKFIAQRITIARAQAENLGRSEKGDFFSV 303
Query: 497 RAFITFIKSDSFCYTACPLMIGDRQCNKKV-TQSGNRWQCDRCNQEIDECDYRYLLQAQI 555
+A I+F+K D+F Y AC + CNKKV Q W+C++C+ ++RY+L I
Sbjct: 304 KAAISFLKVDNFAYPAC----SNENCNKKVLEQPDGTWRCEKCDTNNARPNWRYILTISI 359
Query: 556 QDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKE 615
D+T W+T F + +++LG A L LK E D F +I +S N+Y FR++ +E
Sbjct: 360 IDETNQLWLTLFDDQAKQLLGVDANTLMSLKEE--DPNEFTKITQSIQMNEYDFRIRARE 417
Query: 616 ELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSF 651
+ Y D+ R++ TV +NY +E+ YL D +SK+
Sbjct: 418 DTYNDQSRIRYTVANLHSLNYRAEADYLADELSKAL 453
>gi|307192559|gb|EFN75747.1| Replication protein A 70 kDa DNA-binding subunit [Harpegnathos
saltator]
Length = 597
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 214/653 (32%), Positives = 331/653 (50%), Gaps = 91/653 (13%)
Query: 12 LINGGDVNSKPLVQVM-DIKLIGSTQERYRFLISDSVSTQH-AMLATQLNDRVKTGQVKK 69
++NG D+ KP++Q++ KL S +RYR L+SD + T MLATQLN + + +
Sbjct: 12 IMNGIDI-EKPVIQILGHKKLTNSNSDRYRLLVSDGLRTNSFTMLATQLNHLISDNTLSE 70
Query: 70 GSVVQLIDYICSTVQN----RKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNN 125
+V ++ Y S+V N +++I IILD E + + E+ +K
Sbjct: 71 YTVCEISKYALSSVNNSGKEKRVI-------IILDVE------VIASGEMVGRK------ 111
Query: 126 LPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQP 185
+ PV + S P + N+ S + QN S T + ++ T
Sbjct: 112 IGNPVNTSR-SEPETSKPNI--SAAAHQQN-------GSATKKNNSSNQSSSDISTT--- 158
Query: 186 PYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKV 245
PIAAL+PYQ +W IK RV K +R ++N+RGDGK+
Sbjct: 159 ------------------------PIAALSPYQNKWVIKVRVLTKSQIRTWSNSRGDGKL 194
Query: 246 FSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFL 305
F+ +L+D + GEIR T FN D+FY++IE G VY IS+ LKPA K FN +KN++E+ +
Sbjct: 195 FNMELVD-ESGEIRCTAFNNACDKFYDMIEAGNVYYISRCQLKPANKQFNTMKNDFEMSM 253
Query: 306 EATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGM 364
+ V C + + IP QF+F IS++E+ + + ++DV+G+V + I+ +K G
Sbjct: 254 TNDTEVVPCHDNSEDIPTLQFNFSPISQLENMKKDDMIDVLGVVTTFGELQNIVSQKTGK 313
Query: 365 ETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-- 422
E +R +N+ D S +V +TLWG K E D P++++KS +V +F+G
Sbjct: 314 EHVKRDINIVDDSSVTVCVTLWG--------KQAEDFDASNNPIVAIKSARVGEFNGGKN 365
Query: 423 -SIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAK-NEIHKTVSQI 480
SIG + + +PD EAH LR W+ +GG S+S+ AGG N T +
Sbjct: 366 LSIGGMAIIEK--DPDLPEAHRLRGWYSAGGHLENVKSLSKAGGAGGGDMNAPLYTFQEA 423
Query: 481 KNEGLG-RSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKK-VTQSGNRWQCDRC 538
+ LG + + D +V A I I+ ++ Y ACPL C KK V QS ++C++C
Sbjct: 424 TDAKLGEKMDAADVFSVTATINIIRVENSIYKACPL----ESCKKKLVDQSTGVFRCEKC 479
Query: 539 NQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDV--RFG 596
N++ YR L I D TG W+TAF E E+ILG A+EL LK D +FG
Sbjct: 480 NKDYPNFLYRLLASMNIADATGSRWITAFNEEAEKILGMSAQELGELKENDNDAYMQKFG 539
Query: 597 EIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+ F ++ F +++K E++ DE R++ T +NY +LLD SK
Sbjct: 540 DA----SFKRFTFGVRVKSEVFQDEMRMRHTCTSVSPLNYRIYLAHLLDKASK 588
>gi|429855381|gb|ELA30339.1| replication factor-a protein 1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 607
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 195/641 (30%), Positives = 327/641 (51%), Gaps = 80/641 (12%)
Query: 22 PLVQVMDIKLI----GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLID 77
P++Q + IK + G ERYR ++SD + MLATQ+N V G++ + +V++
Sbjct: 29 PVLQCLQIKPLAAQAGGGAERYRIVLSDVNNYVQCMLATQVNHVVHDGKLVRNCIVRITQ 88
Query: 78 YICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSA 137
Y + V+ + I+++L +E I E +G P E PQ
Sbjct: 89 YQANAVKGKNILIILGLEVI----ENLGTPDKIGE--------------PQ--------- 121
Query: 138 PNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPN----F 193
F ++ P + +T G ++F Q +P P
Sbjct: 122 ------------AFEAKAPPAANTTIGG-----------QNFYGVKQEETKPKPQQSIPT 158
Query: 194 RNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDS 253
R G I PI AL+PY +W IKARVT K D+R ++ G+GK+FS +LLD
Sbjct: 159 RTAGGASGQHGSNNIYPIEALSPYAHKWTIKARVTQKSDIRTWHKPSGEGKLFSVNLLD- 217
Query: 254 DGGEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATSTVD 312
+ GEI+ T FN VD++Y++++ G VY IS ++ A+K F +L N++E+ E + ++
Sbjct: 218 ESGEIKATGFNEQVDQYYDLLQEGSVYYISNPCKVQLAKKQFTNLPNDYELTFERDTLIE 277
Query: 313 LCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRIL 371
E+ ++P+ +F+F +I E++ E ++ VDVIG++ V I+ K+ G ++R L
Sbjct: 278 K-AEDQSNVPQVRFNFCNIQELQEVEKDATVDVIGVLKDVAEVSQIVSKSTGKPYEKREL 336
Query: 372 NLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQ 431
L D + SV +T+WG K DV V++ K KV+DF G+S+ + S
Sbjct: 337 TLVDDTNYSVRVTIWG--------KSATGFDVKPESVVAFKGVKVSDFGGRSLSLLSSGT 388
Query: 432 LFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGA--KNEIHKTVSQIKNEGLGRSE 489
+ I+PD EAH L+ W+DS G+N A + + + G A + + K++ Q+K E LG E
Sbjct: 389 MSIDPDITEAHRLKGWYDSSGRNDAFNTHNNMASMGNATGRKDQDKSIVQVKEENLGM-E 447
Query: 490 KPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYR 548
+ D+ ++A I +IK D+F Y AC C+KKVT G+ W+C++C+ +YR
Sbjct: 448 QQDYFNLKATIVYIKQDNFAYPACM----SEGCSKKVTDMGDGTWRCEKCDISHPRPEYR 503
Query: 549 YLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYL 608
Y++ + D T W++ F + G ++G A +L L+ + D+ + + +
Sbjct: 504 YIMSVNVCDHTNQLWLSCFDDVGRIVMGMSADDLMALRED--DETKLAQAFEEANCRKLN 561
Query: 609 FRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
FR + K + +G+ QRV+ V+ A Q+++ SE L DLI +
Sbjct: 562 FRCRAKMDTFGESQRVRYQVMSATQIDFKSEGAKLADLIKQ 602
>gi|302913119|ref|XP_003050848.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731786|gb|EEU45135.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 611
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 200/640 (31%), Positives = 332/640 (51%), Gaps = 75/640 (11%)
Query: 22 PLVQVMDIKLIGSTQ---ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
P++Q + +K + + ERYR ++SD MLATQ N V+ ++ +G ++ Y
Sbjct: 29 PVLQCLQVKQMAPSAQGGERYRLVMSDGQHYVQTMLATQANHVVRDNKLVRGCFARIKQY 88
Query: 79 ICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAP 138
+ ++ + I+V ILD E + + I + + +PV V+
Sbjct: 89 TPNNLKGKNILV-------ILDLEVVESLGI-------------QDKIGEPVAVD----- 123
Query: 139 NSGTFNLQNSGTFNSQNPGSFSTPNSGTF---RAPNAGSIVRSFQPTVQPPYQPPPNFRN 195
++ PG G F + + FQ Q P
Sbjct: 124 --------------AKPPGQEGAIAGGDFYGVKKEEQKPQPQQFQQQQQQQQSMPSRPAM 169
Query: 196 HGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDG 255
HG + I PI L+P+ +W IKARVT+K D++ ++ A G+GK+FS +LLD +
Sbjct: 170 HGG-------SNIYPIEGLSPFAHKWTIKARVTSKSDIKTWHKATGEGKLFSVNLLD-ES 221
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATSTVDLC 314
GEI+ T FN D FY+ ++ G VY IS + A+K F++L N++E+ E + ++
Sbjct: 222 GEIKATGFNEQCDAFYDRLQEGSVYYISTPCRVSLAKKQFSNLPNDYELAFERDTVIEK- 280
Query: 315 TEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNL 373
E+ ++P+ +F+F I E++S E ++ VDVIG++ V I+ +K+G Q+R L L
Sbjct: 281 AEDQTNVPQVRFNFCTIQELQSVEKDNTVDVIGVLKEVGEIGEIVSKKDGRPFQKRELTL 340
Query: 374 KDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF 433
D +G SV +T+WG N D V++ K KV+DF GKS+ + S +
Sbjct: 341 VDDTGYSVRVTVWGKTANS--------FDAPAESVVAFKGTKVSDFGGKSLSLLSSGTMS 392
Query: 434 INPDFAEAHELREWFDSGGKN---AATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEK 490
++PD A+AH L+ W+DS G+ A ++ A G K+EI KT+SQ+K+E LG ++
Sbjct: 393 VDPDIADAHRLKGWYDSAGRTDTFATHQGMASMGNATGRKDEI-KTISQVKDENLGMDDQ 451
Query: 491 PDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRY 549
+ T++A I F+K D+FCY AC + CNKKVT+ G+ W C++CN ++ +YRY
Sbjct: 452 A-YYTIKATIVFMKQDTFCYPAC----ASQGCNKKVTEMGDGTWHCEKCNVSHEKPEYRY 506
Query: 550 LLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLF 609
+L + D T W++ F +SG++ILG A E+ LK E D +F + F
Sbjct: 507 ILSLNVADHTSHQWLSCFDDSGQKILGRTANEMMELK-ESDDPTKFTAAFEEANCKKLTF 565
Query: 610 RLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
R + K + +G+ QR++ V+ A ++++SE L ++I +
Sbjct: 566 RCRAKMDNFGEAQRIRYQVMSAMPLDFTSEGNKLKEMIKE 605
>gi|254565291|ref|XP_002489756.1| Subunit of heterotrimeric Replication Protein A (RPA) [Komagataella
pastoris GS115]
gi|238029552|emb|CAY67475.1| Subunit of heterotrimeric Replication Protein A (RPA) [Komagataella
pastoris GS115]
gi|328350171|emb|CCA36571.1| Replication protein A 70 kDa DNA-binding subunit [Komagataella
pastoris CBS 7435]
Length = 621
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 191/648 (29%), Positives = 345/648 (53%), Gaps = 79/648 (12%)
Query: 21 KPL-VQVMDIKLI-GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
KPL VQV+++K I +T +R R + D + +A++ + ++ + +KKGS+VQL++Y
Sbjct: 22 KPLTVQVLNLKAIPNNTGKRLRLALCDGLYNANAVIRPESVEKAEAQGIKKGSIVQLLEY 81
Query: 79 ICSTVQN-RKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSA 137
S + + ++++ N++ + E I P P V+ Y +
Sbjct: 82 KASMISPVKHVLIIDNLQVLGFQEEKIN---------------------PSPTSVDQYFS 120
Query: 138 PNSGTFNLQNSGT-FNS---QNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNF 193
+SG N GT NS Q P + + P + V S
Sbjct: 121 NHSGESNEDLLGTSMNSPAPQEPAQKAQSHHQEDAKPKLSAQVTS--------------- 165
Query: 194 RNHGPILKNEAPAR---IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDL 250
P N + A+ I I LNPYQ W IKARV+ K D+R+++N RG+G++F+ +L
Sbjct: 166 ---KPQQTNSSTAKFPNIHAIDQLNPYQNNWTIKARVSYKSDMRKWSNQRGEGQLFNVNL 222
Query: 251 LDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATST 310
LD + EIR T FN V D++Y++++ G+VY ISK ++PA+ F++L + +E+ L+ +
Sbjct: 223 LD-ETNEIRATAFNDVADKYYDLLQEGKVYYISKARIQPAKPQFSNLTHTYELALDRDTQ 281
Query: 311 VDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRR 369
+ + E+ +P F+F +++++ + N+I+DVIG++ VNP+ I+ K+ G RR
Sbjct: 282 I-IEAEDASDVPSLHFNFVKLNKVQDLDANAIIDVIGVIKVVNPAFQIVAKSTGRPFDRR 340
Query: 370 ILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPS 429
+ + D +G ++ + LW + L+ + VG V++ K KV DF G+S+ S
Sbjct: 341 DIEVVDNTGFAITVGLWNNTA------LEFDIPVG--SVVAFKGAKVQDFGGRSLSLTQS 392
Query: 430 TQLFINPDFAEAHELREWFD-SGGKNAATVSISREIAAGGAKN-----EIHKTVSQIKNE 483
+ NPD EA++L+ W+D GG N S+ E+++ N + KT+ Q ++E
Sbjct: 393 ATIITNPDSPEAYQLKAWYDQQGGSNQEFKSLKNEVSSNSGLNTKQDIQSRKTILQAQSE 452
Query: 484 GLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKV-TQSGNRWQCDRCNQEI 542
LG+++KPD+ +++A+I++I++++F Y AC CN+KV QS + W+C++C+
Sbjct: 453 ELGKNDKPDYFSIKAYISYIRTENFSYPAC----ASEGCNRKVIQQSDDTWRCEKCDVNH 508
Query: 543 DECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSR 602
+ ++RY+L + D TG WVT F + +++LG A EL LK ++D+ +
Sbjct: 509 PKPNHRYILTLSVVDHTGQLWVTLFDDQAQQLLGQSAGELIDLK---ENDMSENNHAFQQ 565
Query: 603 VFN-----QYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLD 645
VFN ++ FR+K + Y + R++ + +++++ E+ L D
Sbjct: 566 VFNRIQMKEFSFRVKASPDSYKGQTRIRYNAVSLAKLDFALEADALAD 613
>gi|310793692|gb|EFQ29153.1| replication factor-a protein 1 [Glomerella graminicola M1.001]
Length = 608
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 191/637 (29%), Positives = 326/637 (51%), Gaps = 71/637 (11%)
Query: 22 PLVQVMDIKLI----GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLID 77
P++Q + IK + G ERYR ++SD + MLATQ+N V ++ + +V++
Sbjct: 29 PVLQCLQIKPLAAQAGGGAERYRIVLSDVNNYVQCMLATQVNHVVHENKLVRNCIVRITQ 88
Query: 78 YICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSA 137
Y ++V+ + I+++L +E I E +G P E PQP A
Sbjct: 89 YQANSVKGKNILIILGLEVI----EQLGTPDKIGE--------------PQPFEAKPPPA 130
Query: 138 PNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHG 197
+ T QN + T P Q P+ R+ G
Sbjct: 131 AANTTIGGQNFYGVKQEE--------------------------TKPKPQQSIPS-RSAG 163
Query: 198 PILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGE 257
+ I PI AL+PY +W IKARVT K D+R ++ G+GK+FS +LLD + GE
Sbjct: 164 GATGQHGSSNIYPIEALSPYAHKWTIKARVTQKSDIRTWHKPSGEGKLFSVNLLD-ESGE 222
Query: 258 IRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE 316
I+ T FN VD++Y++++ G VY IS ++ A+K F +L N++E+ E + ++ E
Sbjct: 223 IKATGFNEQVDQYYDMLQEGGVYYISSPCKVQLAKKQFTNLPNDYELTFERDTVIEK-AE 281
Query: 317 EDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKD 375
+ S+P+ +F+F +I E++ E ++ VD+IG++ V+ I+ K+ G ++R L L D
Sbjct: 282 DQSSVPQVRFNFCNIQELQEVEKDATVDIIGVLKDVDEVSQIVSKSTGKPYEKRELTLVD 341
Query: 376 TSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFIN 435
+ SV +T+WG K D V++ K KV+DF G+S+ + S + I+
Sbjct: 342 DTNYSVRVTIWG--------KSATNFDAKPESVVAFKGTKVSDFGGRSLSLLSSGTMSID 393
Query: 436 PDFAEAHELREWFDSGGKNAATVSISREIAAGGA--KNEIHKTVSQIKNEGLGRSEKPDW 493
PD +AH L+ W+DS G+N S + + G A + + K++ Q+K E LG E+ D+
Sbjct: 394 PDIPDAHRLKGWYDSSGRNDTFSSHNNMASMGNATGRKDQDKSILQVKEENLGM-EQQDY 452
Query: 494 VTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQ 552
++A I +IK D+F Y AC + C+KKVT G+ W+C++C+ + +YRY++
Sbjct: 453 FNLKATIVYIKQDNFAYPACM----NEGCSKKVTDMGDGTWRCEKCDVSHPKPEYRYIMS 508
Query: 553 AQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLK 612
+ D T W++ F + G ++G A +L L+ E D+ + + + FR +
Sbjct: 509 VNVCDHTNQLWLSCFDDVGRVVMGMSADQLMALREE--DETKMAQAFEEANCRKLNFRCR 566
Query: 613 IKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
K + +G+ QR++ V+ A ++Y +E L +LI +
Sbjct: 567 AKMDTFGESQRIRYQVMSASPIDYKAEGAKLAELIKQ 603
>gi|346324124|gb|EGX93721.1| replication factor-A protein 1 [Cordyceps militaris CM01]
Length = 598
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 205/663 (30%), Positives = 338/663 (50%), Gaps = 94/663 (14%)
Query: 5 LTPNSISLI-NGGDVNSK----PLVQVMDIKLIGSTQE---RYRFLISDSVSTQHAMLAT 56
L+ S+ LI N D +K P +Q + +K + + + RYR ++SD MLAT
Sbjct: 7 LSKGSLDLIFNDPDKATKQFPIPTMQCLQVKQMAPSAQGGDRYRLVMSDGKHYVQTMLAT 66
Query: 57 QLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETI----ILDCEPIGNPKIFSE 112
Q N V ++ +G + ++ Y + ++ + I+++L++E I ILD IG P
Sbjct: 67 QANHVVHDEKLVRGCIARVKQYTPNNLKGKNILIILDLEVIESYGILD--KIGEPSAVES 124
Query: 113 SELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNA 172
A+ TI N+ G + P TP T
Sbjct: 125 K--AAETTIAGNDF---------------------YGVKKEEKP----TPQQQTM----- 152
Query: 173 GSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGD 232
P +P + N+ I PI L+P+ +W IKARVT+K +
Sbjct: 153 -------------PSRPAMHAGNN-----------IYPIEGLSPFSHKWTIKARVTSKSE 188
Query: 233 LRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQ 291
++ ++ A G+GK+FS +LLD + GEI+ T FN D FYE+++ G VY IS + A+
Sbjct: 189 IKTWHKATGEGKLFSVNLLD-ESGEIKCTGFNDQCDAFYELLQEGSVYYISTPCRVNLAK 247
Query: 292 KNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVIS 351
K F++L N++E+ E + ++ E+ ++P+ +F+F I E++S E ++ VD+IG++
Sbjct: 248 KQFSNLPNDYELAFERDTVIEK-AEDQTNVPQVRFNFSTIQELQSVEKDNTVDIIGVLKE 306
Query: 352 VNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLS 410
I+ +K G Q+R L + D +G SV +T+WG K D V++
Sbjct: 307 AGEISEIVSKKTGAPYQKRELTMVDDTGYSVRVTIWG--------KTASSFDAQPESVVA 358
Query: 411 VKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKN---AATVSISREIAAG 467
K KV+DF GKS+ + S + ++PD +AH L+ W+DS G+N +++ AA
Sbjct: 359 FKGTKVSDFGGKSLSLLSSGTISVDPDIPDAHRLKGWYDSAGRNDNFTTHQNLASVGAAA 418
Query: 468 GAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT 527
G +EI KT++Q+K E LG ++ + T++A I F+K D+FCY AC L G CNKKV
Sbjct: 419 GRTDEI-KTIAQVKEENLGVDDQA-YYTIKATIVFVKQDNFCYPAC-LSQG---CNKKVQ 472
Query: 528 QSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLK 586
G+ W+C++CN D+ +YRY++ + D T W++ F ESG I+G A EL LK
Sbjct: 473 DMGDGTWRCEKCNLSHDKPEYRYVMNFNVADHTSHQWLSCFDESGRAIVGMSADELMDLK 532
Query: 587 YELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDL 646
D+ +F + + FR + + + YG+ QRV+ V+ A +++ SE L ++
Sbjct: 533 E--NDEAKFMATFEAVNCKKLQFRCRARMDNYGEVQRVRYQVMTASFLDFKSEGDKLAEM 590
Query: 647 ISK 649
I +
Sbjct: 591 IKQ 593
>gi|346974864|gb|EGY18316.1| replication factor-A protein [Verticillium dahliae VdLs.17]
Length = 617
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 193/639 (30%), Positives = 323/639 (50%), Gaps = 68/639 (10%)
Query: 22 PLVQVMDIKLIGSTQ---ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
P++Q + IK + Q +R+R ++SD + +M+ATQ+N + G + K +V++ Y
Sbjct: 31 PVLQCLQIKPLAGQQGAADRFRIVLSDINNYVQSMMATQVNHVIHDGHLVKNCLVRVTQY 90
Query: 79 ICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYS 136
++V+ + I+++L +E I + E IG+P F + +P P P
Sbjct: 91 QPNSVKGKNILIILGLEVIPELGTPEKIGDPLAF--------EPLPEGAAPNP------- 135
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNH 196
N+G +Q + ++ P + RS T +H
Sbjct: 136 -GNTGNAPIQGQNFYGAKKEEEKEKPRISQIPS-------RSVAGT------------SH 175
Query: 197 GPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGG 256
G + I PI AL+PY +W IKARVT K D+R ++ G+GK+FS +LLD + G
Sbjct: 176 GS-------SNIYPIEALSPYAHKWTIKARVTQKSDIRTWHKPSGEGKLFSVNLLD-ESG 227
Query: 257 EIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
EI+ T FN D++Y++++ G VY IS + A+K F +L N++E+ E + ++
Sbjct: 228 EIKATGFNEQCDQYYDLLQEGSVYYISNPCKVGMAKKQFTNLPNDYELTFERDTVIEK-A 286
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLK 374
E+ ++P+ +++F +I E++S E ++ VDV+G++ V I+ K+ G ++R L L
Sbjct: 287 EDQTNVPQVRYNFCNIQELQSVEKDATVDVVGVLKDVGEVSQIVSKSTGKPYEKRELTLV 346
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
D S SV +T+WG K + D V++ K KV+DF G+S+ + S + +
Sbjct: 347 DDSNFSVRITIWG--------KSAQGFDASPESVVAFKGVKVSDFGGRSLSLLSSGTMSV 398
Query: 435 NPDFAEAHELREWFDSGGKNAATV---SISREIAAGGAKNEIHKTVSQIKNEGLGRSEKP 491
+PD +AH L+ W DS G+N A S+ + A + K + Q+K+E LG EK
Sbjct: 399 DPDIPDAHRLKGWHDSSGRNDAFATHNSMGSGLGAATGRPNEDKVIVQVKDEQLGMGEKQ 458
Query: 492 DWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYL 550
D+ ++A I +IK D+F Y AC + CNKKV + W+CD+C+ D +YRY+
Sbjct: 459 DFFNLKATIVYIKQDTFAYPACR----NEGCNKKVVDMNDGTWRCDKCDVSHDRPEYRYI 514
Query: 551 LQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFR 610
+ + D T W++ F E G I+G A +L LK E D+ + + FR
Sbjct: 515 MSVNVCDHTSQLWLSCFDEVGRSIMGMSADQLMELK-EGGDEATLANAFEAANCKKLAFR 573
Query: 611 LKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
K + +G+ QR++ A V Y SE L +LI +
Sbjct: 574 CSAKMDTFGESQRIRYQARSAAPVEYKSEGNKLAELIKQ 612
>gi|256070189|ref|XP_002571426.1| replication factor A 1 rfa1 [Schistosoma mansoni]
Length = 555
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 190/610 (31%), Positives = 317/610 (51%), Gaps = 79/610 (12%)
Query: 53 MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSE 112
MLATQLN ++ ++ +V+++ ++C+ +QN K+++ I+LD + +G ++
Sbjct: 1 MLATQLNHLIEENKLVNNTVIRVRKHVCNNIQNNKVVL------IVLDLDILG-----TD 49
Query: 113 SELTAQKTIPSNNLPQPVRVNNYS-APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPN 171
K+ + +P ++S P T ++G F+ P + TP G
Sbjct: 50 DSSGGVKSEQPPTVAKPATTTSHSYEPEQKTPPKSSTGPFSGGQPSTPGTPGCGL----- 104
Query: 172 AGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKG 231
R+ PI +LNPYQ RW I+ARV+ K
Sbjct: 105 ----------------------------------PRVFPIQSLNPYQNRWTIRARVSQKS 130
Query: 232 DLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQ 291
+R ++ DGK+F+F L+D + GEIRVT FNA VD+FY++IEV +VY +S+ +LK A
Sbjct: 131 AIRTWSKQGRDGKLFNFTLVD-ESGEIRVTGFNAEVDKFYDMIEVNKVYYVSRANLKAAN 189
Query: 292 KNFNHLKNEWEIFLEATSTVDLCTEED-DSIPKQQFSFRHISEIESAENNSIVDVIGIVI 350
K FN N++E+ L + S V C + D S+P+ F+F I ++++ S VD++G+V
Sbjct: 190 KQFNTTNNDYEMTLHSDSQVLPCEDSDTSSLPETHFNFISIGKLDTQSPGSFVDIVGVVH 249
Query: 351 SVNPSVPILRKNGM-ETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVL 409
I K E ++R L L D+S V LTLW G++ + V PV+
Sbjct: 250 ECGEVQSITAKASQRELRKRELGLVDSSNCLVRLTLW-------GEEAENFVGAS-HPVI 301
Query: 410 SVKSGKVNDFSGKSIGTIPSTQLFINP-DFAEAHELREWFDSGGKNAATVSISREI--AA 466
+K+ K++DF+G+S+ P++ L I+P + EA L+ W++ G+ + + E+ ++
Sbjct: 302 VIKAAKISDFNGRSLSVSPTSSLLISPTNIPEAIRLKGWYEHEGRFSNFETFRSEMVGSS 361
Query: 467 GGAKNEIHKT--------VSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIG 518
GGA + + +K G+G + K D+ T +A + F+K ++F Y AC
Sbjct: 362 GGADGVSSSSGVLGGWNLLQDVKASGVGANVKADYFTCKATVVFMKKENFMYQAC----S 417
Query: 519 DRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGC 577
CNKKV GN ++C++C +E +C +R LL A+I D TG WVT FQ++ E +LG
Sbjct: 418 TEGCNKKVIDLGNGLYRCEKCARETPDCKWRLLLMAKIADITGDLWVTCFQDAAEVLLGQ 477
Query: 578 PAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYS 637
A++L +K QD+ + ++ FN ++FRL+ K + Y DE+R+++ V V+
Sbjct: 478 TAEKLGTIK-STQDETQLEKVFIESAFNSWIFRLRAKVDRYNDEERLRVVVADVKPVDLV 536
Query: 638 SESRYLLDLI 647
SR LL I
Sbjct: 537 DYSRRLLKAI 546
>gi|195108849|ref|XP_001999005.1| GI24276 [Drosophila mojavensis]
gi|193915599|gb|EDW14466.1| GI24276 [Drosophila mojavensis]
Length = 610
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 172/440 (39%), Positives = 250/440 (56%), Gaps = 22/440 (5%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
PIA+L+PYQ +W IKARVT+K +R ++NARG+GK+FS DL+D + GEIR T F D+
Sbjct: 175 PIASLSPYQNKWVIKARVTSKTAIRTWSNARGEGKLFSMDLMD-ESGEIRATAFKEQCDK 233
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD-SIPKQQFSF 328
FY++IEVG VY SK LKPA K ++ LKN++E+ + V LC E+D+ IP+ +F
Sbjct: 234 FYDLIEVGNVYFFSKCQLKPANKQYSQLKNDYEMTFTGETMVQLCDEDDNGGIPEIKFDL 293
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTLWG 387
IS++ + EN VD IGI V R E ++R L L D S +V LTLWG
Sbjct: 294 IPISQVSNMENKEAVDTIGICKEVGELQTFTSRTTNKEFKKRELTLVDMSNAAVTLTLWG 353
Query: 388 DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFS-GKSIGTIPSTQLFINPDFAEAHELRE 446
D +Q PV+ VK ++N+F+ GKS+ + L INPD EAH+LR
Sbjct: 354 DEAVNFDGHVQ--------PVILVKGSRINEFNGGKSLSMGGGSILKINPDIPEAHKLRG 405
Query: 447 WFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSD 506
WFD+GG + + +S GG+ + T+ + LG +KPD+ +A + +K +
Sbjct: 406 WFDNGGGDNISTMVSAR-TGGGSFSTDWVTLKDARIRNLGSGDKPDYFQCKAVVHIVKQE 464
Query: 507 SFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVT 565
+ Y ACP CNKKV GN +++C+RCN YR L+ I D T WVT
Sbjct: 465 NAFYKACP----QTDCNKKVVDEGNGQYRCERCNAAFPNFKYRLLINMSIGDWTSNRWVT 520
Query: 566 AFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRV-FNQYLFRLKIKEELYGDEQRV 624
F E GE++L A+E + L++D E + S + F+ Y+F+L+ K E+YGD R
Sbjct: 521 CFSEVGEQLLKHSAQE---VGDALENDPATAEKMFSDINFSSYIFKLRCKNEMYGDMTRN 577
Query: 625 KITVIRADQVNYSSESRYLL 644
K+TV +NY +++L+
Sbjct: 578 KLTVQSMSPINYREYNKHLI 597
>gi|91094635|ref|XP_970093.1| PREDICTED: similar to replication protein A 70 kDa DNA-binding
subunit [Tribolium castaneum]
gi|270016445|gb|EFA12891.1| hypothetical protein TcasGA2_TC004405 [Tribolium castaneum]
Length = 591
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 168/471 (35%), Positives = 269/471 (57%), Gaps = 22/471 (4%)
Query: 182 TVQPPYQPPPNFRNHGPILKNEAPARII-PIAALNPYQGRWAIKARVTAKGDLRRYNNAR 240
T +PP + P + + ++ + R++ I AL PY +W IKARVT K D+R ++N+R
Sbjct: 133 TSEPPVKQPKS-EQSTSLNQSISETRVLNQINALTPYHNKWVIKARVTNKSDMRTWSNSR 191
Query: 241 GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNE 300
G+GK+FSFDL+D D GEIR T F + D+++ ++V +VY ISK LK A K FN LKNE
Sbjct: 192 GEGKLFSFDLMD-DSGEIRCTAFRDMADKYFNYLQVDKVYYISKCQLKAANKQFNTLKNE 250
Query: 301 WEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILR 360
+E+ + + ++ C +D +P+ +++F IS + E ++VDVIGI +
Sbjct: 251 YEMTIGNETIIEECLTDDGHVPQVKYNFVPISALAEKEVGNLVDVIGICKEASEVQTFTS 310
Query: 361 KN-GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDF 419
K+ E ++R + L D S S+ LTLWG + D PV+ +K KV +F
Sbjct: 311 KSTNRELRKREITLVDQSKTSIALTLWGSQADS--------FDATNNPVVVIKGAKVGEF 362
Query: 420 -SGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVS 478
GK++ T+ S+Q+ +NPD E H ++ W+DS G+ A ++S + G+ ++
Sbjct: 363 GGGKNLSTLMSSQIKLNPDIPECHRIKGWYDSEGQYDAMTNLSERVGGVGSFQTAWMSLK 422
Query: 479 QIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDR 537
+++++GLG SEK D+ V+A I ++S++ Y ACP CNKKV N ++C++
Sbjct: 423 EVQDKGLGHSEKGDYFQVKATILLVRSENALYKACPT----DDCNKKVVDLENGMYRCEK 478
Query: 538 CNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFG- 596
C +E YR L+ I D +G WV+ F E+ILG A+E+ + ++DD G
Sbjct: 479 CCREFPNFKYRLLVSMNIGDFSGNQWVSVFSSEAEKILGKTAQEIGLT---MRDDSEAGT 535
Query: 597 EIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
I ++ F Q++F+ + K E Y DEQR+KI V++ D VNY + YL + I
Sbjct: 536 AIFQAANFKQFIFKCRAKMENYNDEQRLKIVVVKVDPVNYEEYNGYLCEQI 586
>gi|402085897|gb|EJT80795.1| replication factor-A protein 1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 628
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 200/640 (31%), Positives = 330/640 (51%), Gaps = 57/640 (8%)
Query: 22 PLVQVMDIKLIGSTQ--------ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVV 73
P++Q + IKL+ + Q ERYR ++SD + ML+TQ N + + KGS+V
Sbjct: 31 PVLQCLQIKLLENKQANPDAPFPERYRVVLSDMDNYIQCMLSTQANHIIHDNLLYKGSIV 90
Query: 74 QLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVN 133
++ Y S ++ R I+V +LD E I + I+ + L +P +
Sbjct: 91 RVRSYSASQLKGRSILV-------LLDLEVIESLGIYEK-------------LGEPTSIE 130
Query: 134 NYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNF 193
P + T + +G + ++ + VR+ P+
Sbjct: 131 AKGEPATST-TIGGTGFYGAKQEPEMEPEMEPEPKPQ-----VRNQMPSRAAGSGAGGGG 184
Query: 194 RNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDS 253
G N A I PI +L+PYQ +W IKARV++K D+R ++ G+GK+FS +LLD
Sbjct: 185 GGGGGPASN-PNAVIYPIESLSPYQHKWTIKARVSSKSDIRTWHKPSGEGKLFSVNLLD- 242
Query: 254 DGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVD 312
+ GEI+ T FN ++FY+++E +VY IS ++ A+K F +L N++E+ E + ++
Sbjct: 243 ETGEIKATGFNNECEKFYDLLEENQVYYISSPCRVQMAKKQFTNLPNDYEMTFEDGTQIE 302
Query: 313 LCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRIL 371
E+ ++P+ +F+F +I E++ E ++ VD+IG++ I+ KN G +R L
Sbjct: 303 K-AEDQSNVPQVRFNFCNIQELQEVEKDATVDLIGVLKEAADITQIVSKNSGKNFDKREL 361
Query: 372 NLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQ 431
L D SG SV +T+WG K D V++ K KV DF G+S+ + S
Sbjct: 362 TLVDDSGYSVRMTIWG--------KTALGFDAKPESVIAFKGAKVGDFGGRSLSLLSSGT 413
Query: 432 LFINPDFAEAHELREWFDSGGKNA--ATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSE 489
+ ++PD EAH L+ W+DS G++ AT + AA G K+E+ KTVSQ+K+EGLG E
Sbjct: 414 MTLDPDIPEAHRLKGWYDSSGRDNSFATHNTGSLGAATGRKDEL-KTVSQVKDEGLGM-E 471
Query: 490 KPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRY 549
+ ++A I FI+ ++FCY AC C+KKV + G W+C++C +YRY
Sbjct: 472 TDTYFNLKATIVFIRQENFCYPACM----SATCSKKVVEDGENWRCEKCQISHPRPEYRY 527
Query: 550 LLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLF 609
++ + D TG WV+ F + G I+G A EL LK E D+ F + + F
Sbjct: 528 IMSVNVNDHTGQLWVSCFDDVGRIIMGKSADELMALKEE--DEESFTRAFEAANCRRLSF 585
Query: 610 RLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
R + K + +G+ QRV+ V+ A +++ E+ L ++I +
Sbjct: 586 RCRAKMDTFGEVQRVRYQVMSAAPMDWKGEAARLTEMIKQ 625
>gi|344303316|gb|EGW33590.1| hypothetical protein SPAPADRAFT_135958 [Spathaspora passalidarum
NRRL Y-27907]
Length = 626
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 202/658 (30%), Positives = 338/658 (51%), Gaps = 65/658 (9%)
Query: 5 LTPNSISLI---NGGDVNSKPLV-QVMDIKLIGSTQERYRFLISDSVSTQHAMLATQLND 60
LT N++ I D PL+ QV +IK + +R L+ D V + ++
Sbjct: 6 LTTNALKDIFSTTAKDTVKTPLILQVTNIKHVEGGSRSFRVLLFDGVFSGQGLVEESCGT 65
Query: 61 RVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKT 120
+K + +Q+ D+ + + R II++ N+E I + E T
Sbjct: 66 YLKNNGFARYQYIQVNDF-STVITQRHIIILKNVE-------------ILGQGEKT---- 107
Query: 121 IPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQ 180
N + + P LQ + + PN+ + + F
Sbjct: 108 ---ENQAKQIEAYYKEHPEEDFLALQKAK--------GETYPNADVAKTRSESP----FT 152
Query: 181 PTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAR 240
P PP + P+ + AP RI PI ++PYQ W IKARV+ KGDLR ++NA+
Sbjct: 153 PQTTTSTPAPPAPKPAPPVSASGAPIRITPIETISPYQNNWTIKARVSYKGDLRTWSNAK 212
Query: 241 GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNE 300
G G++FS + LD + EI+ T FN +R Y ++E G+VY ISK + A+K FNHL +
Sbjct: 213 GTGQLFSVNFLD-ESDEIKATAFNETAERAYNLLEEGKVYYISKARVAAAKKKFNHLTHP 271
Query: 301 WEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILR 360
+EI +E + + C ++ ++PK F+F +++I+ E+N+IVDVIG + VN I
Sbjct: 272 YEITMEKDTEITECF-DNTNVPKLHFNFVKLNKIQDLESNAIVDVIGALKIVNEPFKITA 330
Query: 361 KN-GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDF 419
K+ G E RR + + D +G ++E+ LW + ++ ++ G +++ K KV D+
Sbjct: 331 KSTGKEFDRRNITIVDETGFAIEMGLWNN------TAVEFNIEQG--SIIAFKGCKVQDY 382
Query: 420 SGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIH--KTV 477
+G+S+ + NP+ EA++L+ W+D+ G N + S+ E ++G + N+I K++
Sbjct: 383 NGRSLTLTQQGSVIPNPESPEAYQLKGWYDNQGINESFKSLKVE-SSGASSNQIENRKSI 441
Query: 478 SQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMI----GDRQ------CNKKVT 527
+Q ++E LG+ EKPD+ TV+A I++ K D+F Y ACP ++ G +Q CN+K+
Sbjct: 442 AQAQDENLGKGEKPDYFTVKATISYTKPDTFAYPACPNVVASNAGSQQARPSQPCNRKLV 501
Query: 528 Q--SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYML 585
+ + W+C+RC+ E YRY+ I D+TG WVT F ++ G A EL +
Sbjct: 502 EQPTDGTWRCERCDINYPEPTYRYIYNCSILDETGQIWVTLFDNEARKLFGIDAGELTKI 561
Query: 586 KYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYL 643
K E QD+ F I F +Y FRL+ +++ Y D+ RV+ + D ++YS+E+ YL
Sbjct: 562 KEEDQDE--FTRRIEDISFKEYQFRLRARQDTYNDQLRVRYQAVGIDFIDYSTEAEYL 617
>gi|395333749|gb|EJF66126.1| replication factor-a protein [Dichomitus squalens LYAD-421 SS1]
Length = 601
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 162/449 (36%), Positives = 257/449 (57%), Gaps = 21/449 (4%)
Query: 206 ARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
A + PI +L+PYQ W IKARVT K D+R ++N RG+GK+FS L+D + GEIR T FNA
Sbjct: 166 AAVYPIESLSPYQTHWTIKARVTNKSDIRTWSNQRGEGKLFSVTLMD-ESGEIRATAFNA 224
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQ 325
VD Y+ ++ G+VYLISK + A+K F+++ NE+E+ E ++ V+ C + D +P +
Sbjct: 225 AVDELYDRLQDGKVYLISKAKVNLAKKKFSNVNNEYELTFERSTEVEECHDATD-VPTVK 283
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
F+F +IS ++ +S DVIG+V V+ I K + +R L + D SG SV +TL
Sbjct: 284 FNFINISSLQDVAKDSTCDVIGVVKDVSELSSITSKATSKIPKRELTIVDRSGYSVRMTL 343
Query: 386 WGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELR 445
WG K E D PV++ K KV DF G+S+ + S+ + +NPD EAH LR
Sbjct: 344 WG--------KQAEQYDENDHPVIAFKGAKVGDFQGRSLSMMSSSTMHVNPDIPEAHALR 395
Query: 446 EWFDSGGKNAATVSISREIAAGGA----KNEIHKTVSQIKNEGLGRSEKPDWVTVRAFIT 501
W+D+ G + S + + +GG + EI + ++ +K LG +KPD RA I
Sbjct: 396 GWYDAAGADQQFQSHTVTMVSGGGITFDRAEI-RNLNDVKVSELGMFDKPDNFCARATIM 454
Query: 502 FIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGL 561
IKSD+ Y ACP C KKV Q G W+C++C++ + ++RY++ + D +G
Sbjct: 455 HIKSDNISYPACPTT----GCGKKVLQMGESWRCEKCDKSFPKPEHRYMVAMAVSDYSGQ 510
Query: 562 TWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDE 621
W F + G+ + G A EL +K ++++++ +I + + + F + K++ Y D+
Sbjct: 511 AWFQGFNDVGQTVFGMTADELVEIKD--REELQYNTVINASIGKTFNFTCRAKQDTYNDQ 568
Query: 622 QRVKITVIRADQVNYSSESRYLLDLISKS 650
RV+ + R +NY E++YL DL+ S
Sbjct: 569 TRVRYGISRILPLNYREEAKYLADLLLTS 597
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Query: 19 NSKPLVQVMDIKLI----GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQ 74
N +P VQ++ K I G TQ+RYR ++SD +MLATQ+N V+ Q+ KG++
Sbjct: 27 NIQPTVQLLSFKKIPPTSGPTQDRYRVIVSDGEHFLQSMLATQMNYIVEEDQIAKGTIAT 86
Query: 75 LIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIF 110
+ + + VQ ++++++L ++ ++ E IG+PK
Sbjct: 87 IEKFSVNLVQGKRLLIILALKVLVKHAEKIGSPKAL 122
>gi|193667016|ref|XP_001951063.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Acyrthosiphon pisum]
Length = 609
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 206/654 (31%), Positives = 349/654 (53%), Gaps = 82/654 (12%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVS-TQHAMLATQLNDRVKTGQV 67
S++N DV P++QV+ ++ I ERYR LISD + AMLATQLN V +G++
Sbjct: 14 SIMNNEDVKD-PVMQVLGVRKITAAGANERYRLLISDGHNLNSFAMLATQLNGMVSSGEI 72
Query: 68 KKGSVVQLIDYICSTVQNR-----KIIVVLNMETII---LDCEPIGNPKIFSESELTAQK 119
+ S++Q+ +I S++ +R ++++++++ ++ + IG+PK
Sbjct: 73 NEFSILQIKRHIISSLTDRSKGSKQVMILIDLAVMVPGDVVGSKIGDPK----------- 121
Query: 120 TIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSF 179
P+ + NSG +N S S ++ P + S+ +S
Sbjct: 122 ---------PI--------------IDNSGQI-VENGASASVDST-----PQSNSLAKS- 151
Query: 180 QPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNA 239
+ + N+G + ++ + I PI +L+PYQ +W I+ARV K +R +NN
Sbjct: 152 -------HSVQSSVINNG-LQRDIDVSNIHPINSLSPYQNKWTIRARVVNKAPVRTWNNQ 203
Query: 240 RGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKN 299
RG+GK+FS DLLD + GEIR T FN+ D+F+++IEV +VY I++G++K A K F++L N
Sbjct: 204 RGEGKLFSMDLLD-ESGEIRATAFNSECDKFFDMIEVNKVYFITRGAIKTANKKFSNLNN 262
Query: 300 EWEIFLEATSTVDLCTEEDDS-IPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI 358
++E+ L + + C + DDS +P +F+F +S+++ + + IVDVIG+ + +
Sbjct: 263 DYELTLSGETQIFPCHDFDDSQMPALKFNFVPLSQVKDVDVDGIVDVIGVCQTAGELTML 322
Query: 359 LRKNG-METQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVN 417
+ K E ++R + + D S SV +TLW E D PV+++K ++
Sbjct: 323 MSKTTRKELKKRDVTIVDQSLSSVTITLW--------DTQAEDFDGSLQPVIAIKGSRIR 374
Query: 418 DFSG-KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKT 476
+F G KS+ + ST + INPD EAH LR W+DS NA SIS G N T
Sbjct: 375 EFMGSKSLSLLGSTVMQINPDIDEAHRLRGWYDSLPSNAEFTSISARSDVGA--NNQFLT 432
Query: 477 VSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQC 535
+ + LG +K D+ ++ + + F+KS+S Y ACP C KKV ++ ++C
Sbjct: 433 IKGAQLAQLGSGDKADYYSMYSHLIFVKSESALYKACP----KPDCQKKVIDRNDGTYRC 488
Query: 536 DRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRF 595
++CN E + YR +L AQ+ D TG WVT FQE+ E +LG + EL L E +++ +
Sbjct: 489 EKCNDETENFKYRLMLSAQLSDSTGNQWVTMFQETAESLLGTTSAELGRLMEESKEE--Y 546
Query: 596 GEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
++ ++++F + R + K E Y +E R+K+T+ ++Y S L+ I +
Sbjct: 547 SDVFQNQMFKLFDIRARAKMETYNNETRLKVTLFSIKPIDYKVASTKLIATIKR 600
>gi|225678017|gb|EEH16301.1| replication protein A 70 kDa DNA-binding subunit [Paracoccidioides
brasiliensis Pb03]
gi|226287502|gb|EEH43015.1| replication factor-A protein [Paracoccidioides brasiliensis Pb18]
Length = 603
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 201/642 (31%), Positives = 340/642 (52%), Gaps = 74/642 (11%)
Query: 20 SKPLVQVMDIKLIG---STQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLI 76
++P+VQ + +K + ++ ER+R + SD + MLATQ N V +GQ+ +G V+L
Sbjct: 25 AEPVVQCVQVKPLPPQPNSPERFRAVFSDISNYVQTMLATQANHYVTSGQLVRGCFVRLK 84
Query: 77 DYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYS 136
+ + V+ ++I++VL++E +LD + KI PQP+ +
Sbjct: 85 SFQANLVKGKRILIVLDLE--VLDRLGVCEKKI---------------GEPQPLDMKQEE 127
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNH 196
S + +G + S+ + S RS T
Sbjct: 128 QDKSLPTTISTNGFYGSR-----------APQQAPQQSAQRSSASTT------------- 163
Query: 197 GPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGG 256
A A I PI AL+PY +W IKAR T K +++ ++N G+G++FS +LLD D G
Sbjct: 164 -------AYANIYPIEALSPYSHKWTIKARCTNKSEIKTWHNKNGEGRLFSVNLLD-DSG 215
Query: 257 EIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
EIR T F D Y + E G VY IS ++ A+K F +L NE+E+ E + V+
Sbjct: 216 EIRATAFKDQCDALYGVFEEGSVYYISSPCRVQIAKKAFTNLNNEYELTFEKDTVVEKAE 275
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILNLK 374
E++D +P+ +F+F +I+ +++ E + +DVIG++ V + IL K + +R L L
Sbjct: 276 EQND-VPQIRFNFTNIANLQTIEPGTTIDVIGVLKDVGEASQILSKTTSKPYDKRDLTLV 334
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
D +G SV LT+WG+ K+ + E V++ K KV+DF G+S+ + S + +
Sbjct: 335 DNTGYSVRLTVWGN-AAKDFDSMPE-------SVVAFKGVKVSDFGGRSLSLLSSGSMTV 386
Query: 435 NPDFAEAHELREWFDSGGKN---AATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKP 491
+PD +AH+L+ W+++ G++ A+ SIS + AG + KT++Q++ E LG SEKP
Sbjct: 387 DPDIEDAHKLKGWYEAQGRSETFASHESISGAVGAGDRRANSFKTIAQVQEENLGMSEKP 446
Query: 492 DWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYRYL 550
D+ +++A + ++K D+ Y AC + D+ CNKKV Q RW+C+RC+Q +YRY+
Sbjct: 447 DYFSLKATVVYVKQDTMAYPAC---LTDK-CNKKVLQDETGRWRCERCDQSFPRPEYRYI 502
Query: 551 LQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFR 610
L + D TG W++ F E G+ +LG A E+ LK D+ E+++ + F
Sbjct: 503 LSVNVCDHTGALWLSCFDEVGKALLGISANEIMELKD--NDERAHEELVQKANCRAWNFN 560
Query: 611 LKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSFR 652
+ K + + ++QRV+ V ++Y++ES L +LI KS++
Sbjct: 561 CRAKMDSFQEQQRVRYQVSSVSPIDYTTESVRLAELI-KSYQ 601
>gi|295674419|ref|XP_002797755.1| replication factor-A protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280405|gb|EEH35971.1| replication factor-A protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 603
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 199/637 (31%), Positives = 337/637 (52%), Gaps = 73/637 (11%)
Query: 20 SKPLVQVMDIKLIG---STQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLI 76
++P+VQ + +K + ++ ER+R + SD + MLATQ N V +G + +G V+L
Sbjct: 25 AEPVVQCVQVKPLPPQPNSPERFRAVFSDITNYVQTMLATQANHFVTSGHLVRGCFVRLK 84
Query: 77 DYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYS 136
+ + V+ ++I++VL++E ILD + KI PQP+ +
Sbjct: 85 SFQANLVKGKRILIVLDLE--ILDRLGVCEKKIGD---------------PQPLDMKQEE 127
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNH 196
S + +G + S+ P + RS T
Sbjct: 128 QDKSLPTTISTNGFYGSRAPQQAPQQPAK-----------RSSASTT------------- 163
Query: 197 GPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGG 256
A A I PI AL+PY +W IKAR T K +++ ++N G+G++FS +LLD D G
Sbjct: 164 -------AYANIYPIEALSPYSHKWTIKARCTNKSEIKTWHNKNGEGRLFSVNLLD-DSG 215
Query: 257 EIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
EIR T F D Y + E G VY IS ++ A+K F++L NE+E+ E + V+
Sbjct: 216 EIRATAFKDQCDALYGVFEEGSVYYISSPCRVQIAKKAFSNLNNEYELTFEKDTVVEKAE 275
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILNLK 374
E++D +P+ +F+F +I+ +++ E + +DVIG++ V S IL K + +R L L
Sbjct: 276 EQND-VPQIRFNFTNIANLQTIEPGTTIDVIGVLKDVGESSQILSKTTSKPYDKRDLTLV 334
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
D +G SV LT+WG+ K+ + E V++ K KV+DF G+S+ + S + +
Sbjct: 335 DNTGYSVRLTVWGN-AAKDFDSMPE-------SVVAFKGVKVSDFGGRSLSLLSSGSMTV 386
Query: 435 NPDFAEAHELREWFDSGGKN---AATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKP 491
+PD +AH+L+ W+++ G++ A+ SIS + +G + KT++Q++ E LG SEKP
Sbjct: 387 DPDIEDAHKLKGWYEAQGRSETFASHESISGAVGSGDRRANSFKTIAQVQEENLGMSEKP 446
Query: 492 DWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYRYL 550
D+ +++A + ++K D+ Y AC + D+ CNKKV Q RW+C+RC+Q +YRY+
Sbjct: 447 DYFSLKATVVYVKQDTMAYPAC---LTDK-CNKKVLQDETGRWRCERCDQSFPRPEYRYI 502
Query: 551 LQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFR 610
L + D TG W++ F E G+ +LG A E+ LK D+ + E+++ + F
Sbjct: 503 LSVNVCDHTGALWLSCFDEVGKALLGISANEIMELKD--NDERAYEELVQKANCRAWNFN 560
Query: 611 LKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
+ K + + ++QRV+ V ++Y++ES L +LI
Sbjct: 561 CRAKMDSFQEQQRVRYQVSSVSPIDYTTESVRLAELI 597
>gi|332018503|gb|EGI59093.1| Replication protein A 70 kDa DNA-binding subunit [Acromyrmex
echinatior]
Length = 608
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 217/670 (32%), Positives = 330/670 (49%), Gaps = 98/670 (14%)
Query: 4 NLTPNSISLINGGDVNSKPLVQVMDIKLI-------GSTQERYRFLISDSVS-TQHAMLA 55
NLT ++ I G P++QV+ K + GS +R+R LISD MLA
Sbjct: 3 NLTEGALEKIMRGIDIDNPVLQVLGYKKLPRNVNKDGSATDRFRLLISDGQKLNSFTMLA 62
Query: 56 TQLNDRVKTGQVKKGSVVQLIDYICSTVQN----RKIIVVLNMETIILDCE---PIGNP- 107
TQLN+ + + ++ ++ +Y S+V N ++++++L +E ++ + IGNP
Sbjct: 63 TQLNNLITENILNDFAICKITNYHMSSVNNSGKEKRVMLILGIEVLVPGDQVGNKIGNPT 122
Query: 108 --KIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSG 165
++ SE E T+ T + N SA N+ T N Q P+S
Sbjct: 123 NIEMKSEPESTSTSTSTCTSKATTSHYQNGSARNA-TSNYQ---------------PSSD 166
Query: 166 TFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKA 225
+ P IAAL+PYQ +W IK
Sbjct: 167 IYTTP----------------------------------------IAALSPYQNKWVIKV 186
Query: 226 RVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKG 285
RVT K ++ ++N+RG+GK+FS DL+D + GEIR T F ++FY++IE G VY IS+
Sbjct: 187 RVTNKSPIKTWSNSRGEGKLFSMDLID-ESGEIRCTAFRDQCEKFYDMIETGNVYYISRC 245
Query: 286 SLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDV 345
+LK A K F LKN++E+ + + + C E D IP QF F IS+IES E N ++DV
Sbjct: 246 TLKAANKQFCTLKNDYEMTMTGDTEIIPCHENSDDIPTLQFDFCPISQIESKEKNDLLDV 305
Query: 346 IGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVG 404
+G+V + N I+ R G E +R +N+ D SG V +TLWG K E D
Sbjct: 306 LGVVTTFNDVQQIIQRTTGRELLKRDINIVDDSGTMVCVTLWG--------KQAEDFDGS 357
Query: 405 FFPVLSVKSGKVNDFS-GKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISRE 463
P++++K +V +F+ GK++ + S+ +PD EAH LR W+ + G + S+S+
Sbjct: 358 NNPIIAIKGARVGEFNGGKNLSLLHSSVFEKDPDLPEAHRLRGWYTAVGHSENIKSLSK- 416
Query: 464 IAAGGAKNEIHKTVSQIKNEGLG-RSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQC 522
GG N T + LG + D TV A I I+ ++ Y ACP+ C
Sbjct: 417 TGGGGDFNAPLYTFEEATEARLGEKMNLADSFTVVATINMIRVENAIYKACPV----ESC 472
Query: 523 NKK-VTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKE 581
KK + QS ++C++CN++ YR L I D TG W+TAF E E+ILG A+E
Sbjct: 473 KKKLIDQSTGVFRCEKCNKDYPNSIYRLLASMNIVDATGSRWITAFSEDAEKILGMSAQE 532
Query: 582 LYMLKYELQDDV--RFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSE 639
L LK D +FGE F +++F L+ K E++ DE R+K VNY +
Sbjct: 533 LGELKENDNDAFLQKFGE----ASFKKFIFTLRAKSEVFQDEMRIKHVCSSVAPVNYKTY 588
Query: 640 SRYLLDLISK 649
+L+D +SK
Sbjct: 589 LTHLIDRVSK 598
>gi|260950665|ref|XP_002619629.1| hypothetical protein CLUG_00788 [Clavispora lusitaniae ATCC 42720]
gi|238847201|gb|EEQ36665.1| hypothetical protein CLUG_00788 [Clavispora lusitaniae ATCC 42720]
Length = 607
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 159/452 (35%), Positives = 261/452 (57%), Gaps = 19/452 (4%)
Query: 201 KNEAPARII-PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIR 259
++ AP R + PI +L+PYQ W IK RV+ K D+R ++NA+G+GK+F+ + LD + EIR
Sbjct: 158 RSAAPERPVNPIESLSPYQNNWTIKGRVSYKSDVRTWSNAKGEGKLFNVNFLD-ESDEIR 216
Query: 260 VTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD 319
T FN + D+FY +++ G+VY ++K ++ A+ F+HL + +E+ L+ + + C + D
Sbjct: 217 ATAFNDMADKFYNLLQEGKVYYVTKARIQQAKPKFSHLSHPYELSLDKDTEITECFDTSD 276
Query: 320 SIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSG 378
+PK +F +++I+SAE ++I+DVIG++ +VN I K+ G RR + + D S
Sbjct: 277 -VPKINMNFTKLNQIQSAEKDTIIDVIGVIQNVNDVFQITAKSTGKPFDRRNITIVDDSN 335
Query: 379 RSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDF 438
+++L LW + + VG V++VK KV DF G+S+ PS L NPD
Sbjct: 336 FAIDLGLWN------ATAVDFNIPVG--SVIAVKGAKVQDFGGRSLSLTPSGSLLSNPDI 387
Query: 439 AEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRA 498
EA++L+ W+DS G + S+ E + + KT++ + LG EKPD+ +++A
Sbjct: 388 PEAYQLKGWYDSKGSSENFQSLKTETGSSTDSLKDRKTIALAEQLDLGTKEKPDYFSIKA 447
Query: 499 FITFIKSDSFCYTACPLMI-----GDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYRYLLQ 552
I + K+D+FCY AC + G CN+KV Q S W+C+RCN E YRY+L
Sbjct: 448 TINYFKTDNFCYPACNNEVNTNGRGPSPCNRKVIQESDGSWRCERCNLTFAEPHYRYILN 507
Query: 553 AQIQDQTGLTWVTAFQESGEEILGCPAKELYMLK-YELQDDVRFGEIIRSRVFNQYLFRL 611
I D TG W T F E G+++ A EL LK E ++ F E++ S ++ FRL
Sbjct: 508 CSIMDHTGQIWATFFDEEGKKLFNKTAGELMALKEMEEGENHEFMELVSSVTMKEFNFRL 567
Query: 612 KIKEELYGDEQRVKITVIRADQVNYSSESRYL 643
+ ++E + RV+ V+ V++++ES++L
Sbjct: 568 RARQESFNGNMRVRYNVVSIADVDFNAESQHL 599
>gi|320583428|gb|EFW97641.1| Subunit of heterotrimeric Replication Protein A (RPA) [Ogataea
parapolymorpha DL-1]
Length = 604
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 166/478 (34%), Positives = 277/478 (57%), Gaps = 43/478 (8%)
Query: 188 QPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFS 247
+PPP ++N + I L+PYQ W IKARV+ K D++ ++N RGDGK+F+
Sbjct: 149 KPPPKYQN------------LYSIDQLSPYQNSWTIKARVSFKSDMKHWSNQRGDGKLFN 196
Query: 248 FDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEA 307
+LLD + GEIR T FN V ++F++++E +V+ ISK S++ A+ F++LK+++E+ +
Sbjct: 197 VNLLD-ETGEIRATAFNQVAEKFWDLLEENKVFYISKASMQMAKPQFSNLKHQYELQFDK 255
Query: 308 TSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMET 366
+ ++ C ++D +PK F F + ++++ EN +++DVIGI+ V I+ K+ G
Sbjct: 256 DTIIEPC-DDDSDVPKLHFDFVPLDQVQNLENGAVIDVIGILKEVKDKQEIVAKSTGKPF 314
Query: 367 QRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGT 426
RR + L D S +V + LW NK ++ DV V++ K +V DF GKS+
Sbjct: 315 DRRDIVLVDKSQFAVNIGLW----NKHAREF----DVPVGSVVAFKGCRVQDFGGKSLSL 366
Query: 427 IPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGA-----KNEI--HKTVSQ 479
IP+ + +NPD EA++++ W+D+ G + + SI+ E + GA K I KT+ Q
Sbjct: 367 IPAATIVVNPDIEEAYKIKGWYDAQGSHQSFKSIALESGSSGATSLTSKQSILERKTIKQ 426
Query: 480 IKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRC 538
+++E LG +KPD+ +++A I+FIK+D+FCY AC CNKK+ + N W+C++C
Sbjct: 427 VQDEKLGLKDKPDYFSLKATISFIKTDNFCYPAC----RSEGCNKKLLEQDNGTWRCEKC 482
Query: 539 NQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDV--RFG 596
N E +YRY+L + D+TG W+T F E ++LG A EL LK + +D G
Sbjct: 483 NINHPEPNYRYILTVSVVDETGQMWLTLFDEQAAQLLGLSAAELLKLKNDAEDPSIESVG 542
Query: 597 E------IIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLIS 648
E I + F + L R++ K + Y + R + TV +V+Y +E L++++S
Sbjct: 543 ENALKNFINENISFKEVLLRVRGKVDSYQGQDRARFTVASLAKVDYLAECEALVEILS 600
>gi|349605285|gb|AEQ00575.1| Replication protein A 70 kDa DNA-binding subunit-like protein,
partial [Equus caballus]
Length = 481
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 173/476 (36%), Positives = 274/476 (57%), Gaps = 23/476 (4%)
Query: 182 TVQPPYQPPPNF-RNHGPILKNEA---PARIIPIAALNPYQGRWAIKARVTAKGDLRRYN 237
TV Y F + G L N + A+++PIA+L PYQ +W I ARVT K +R ++
Sbjct: 19 TVSKAYGASKTFGKAGGASLVNSSGGTQAKVVPIASLTPYQSKWTICARVTNKSQIRTWS 78
Query: 238 NARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHL 297
N+RG+GK+FS +L+D + GEIR T FN D+F+ +++V +VY SKG+LK A K F +
Sbjct: 79 NSRGEGKLFSIELVD-ESGEIRATAFNEQADKFFPLLDVNKVYYFSKGTLKIANKQFTAV 137
Query: 298 KNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVP 357
KN++E+ ++V C E+D +P QF F I E+E+ +S+VD+IGI S +
Sbjct: 138 KNDYEMTFNNETSVMPC-EDDHHLPTVQFDFTGIGELENKPKDSLVDIIGICKSYEDATK 196
Query: 358 I-LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKV 416
I ++ N E +R + L DTSG+ V TLWG+ ++ Q PV+++K +V
Sbjct: 197 ITVKSNNREVSKRNIYLMDTSGKVVTTTLWGEDADRFDGSRQ--------PVMAIKGARV 248
Query: 417 NDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISR-EIAAGGAKNEIHK 475
+DF G+S+ + S+ + +NPD +EA++LR WFDS G+ VSIS + G N K
Sbjct: 249 SDFGGRSLSVLSSSTVIMNPDISEAYKLRGWFDSEGQALDGVSISDLKGGGTGGSNTNWK 308
Query: 476 TVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQ 534
T+ ++K+E LG+ +K D+ + A + +++ ++ Y ACP + CNKKV Q ++
Sbjct: 309 TLYEVKSENLGQGDKADYFSSVATVVYLRKENCMYQACP----SQDCNKKVIDQQNGLYR 364
Query: 535 CDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVR 594
C++C+ E YR +L I D WVT FQES E ILG Y+ + + +++
Sbjct: 365 CEKCDSEFPSFKYRMILSVNIADFQENQWVTCFQESAEAILG--QNTAYLGELKEKNEQA 422
Query: 595 FGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
F E+ ++ F + FR+++K E + DE R+K TV+ V+Y R L+ I K+
Sbjct: 423 FEEVFQNANFRSFTFRIRVKLETFNDESRIKATVMDVKPVDYREYGRRLIMNIRKN 478
>gi|367005983|ref|XP_003687723.1| hypothetical protein TPHA_0K01560 [Tetrapisispora phaffii CBS 4417]
gi|357526028|emb|CCE65289.1| hypothetical protein TPHA_0K01560 [Tetrapisispora phaffii CBS 4417]
Length = 616
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 157/446 (35%), Positives = 264/446 (59%), Gaps = 30/446 (6%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I I L+PYQ W IKARV+ KGD++ ++N +G+GK+F+ + LD+ GEIR T FN +
Sbjct: 181 ISAIEQLSPYQNIWTIKARVSFKGDIKTWHNQKGEGKLFNVNFLDT-SGEIRATAFNDMA 239
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
+F EI++ G+VY +SK L+PA+ F++L + +E+ ++ + ++ C +E + +PK F+
Sbjct: 240 TKFNEILQEGKVYYVSKARLQPAKPQFSNLSHPYELSMDRETIIEECKDESN-VPKTHFN 298
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
F ++ +E+ E NS +DV+G++ +VNP ++ K G + RR + + D + S+ + LW
Sbjct: 299 FVKLNVVENQEANSTIDVLGVIQTVNPHFELVSKAGKKFDRRDITIVDDTSYSISVGLWN 358
Query: 388 ----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHE 443
DF EG ++++K +V+DF GKS+ S+ L NP+ EA+
Sbjct: 359 QQATDFNLPEG------------SIVAIKGVRVSDFGGKSLSMGFSSTLIPNPEVQEAYA 406
Query: 444 LREWFDSGGKNAATVSISREIAAGGAKNEI-----HKTVSQIKNEGLGRSEKPDWVTVRA 498
L+ W+D+ GKN+ S+ +E A A+N I T+++ + + LGRSEK D+ +V+A
Sbjct: 407 LKGWYDANGKNSNFTSLKQEGGAVSAQNLIKFISERTTIAKAQADNLGRSEKGDYFSVKA 466
Query: 499 FITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQD 557
I+F+K D+F Y AC CNKKV ++ + W+C+RCN+ + +YRY+L I D
Sbjct: 467 SISFLKVDNFAYPAC----SSDDCNKKVLENPDGTWRCERCNKNQESPEYRYMLTISIID 522
Query: 558 QTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEEL 617
+TG W+T F + +++LG A +L L+ D F + + N Y FR++ +E+
Sbjct: 523 ETGQMWLTLFNDQAKQLLGVDANKLTELRDTDAD--AFTKTTQDIQMNPYDFRIRAREDN 580
Query: 618 YGDEQRVKITVIRADQVNYSSESRYL 643
Y D+ R++ TV +NY E+ YL
Sbjct: 581 YNDQTRIRYTVSNLHNLNYKVEADYL 606
>gi|396498991|ref|XP_003845364.1| similar to replication protein A 70 kDa DNA-binding subunit
[Leptosphaeria maculans JN3]
gi|312221945|emb|CBY01885.1| similar to replication protein A 70 kDa DNA-binding subunit
[Leptosphaeria maculans JN3]
Length = 611
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 201/651 (30%), Positives = 330/651 (50%), Gaps = 83/651 (12%)
Query: 14 NGGDVNSKPLVQVMDIKLIGSTQ------ERYRFLISDSVSTQHAMLATQLNDRVKTGQV 67
NG + +P++Q + IK + +R+R ++SD + M+AT ND V +GQ+
Sbjct: 18 NGAPAD-QPILQCVQIKPMEPKAGEPNPVQRFRVVLSDIRNFIQTMIATTANDIVTSGQL 76
Query: 68 KKGSVVQLIDYICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQKTIPSNN 125
KKGS+V+L+ Y V+++ I++++ +E + + E IG P+ T I NN
Sbjct: 77 KKGSIVRLLKYNPQRVKDKNILIIMELEVLSEYGELEKIGQPEALETRADTQPAAISGNN 136
Query: 126 LPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQP 185
N AP + Q S + NPG+ S P+
Sbjct: 137 F-----YGNKPAPAAQA--PQRSLPVHQSNPGTSSHPH---------------------- 167
Query: 186 PYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKV 245
+ PI +L+PY +W I+AR T+K D++ ++NA+G GK+
Sbjct: 168 ----------------------LYPIESLSPYAHKWTIRARCTSKSDMKEWHNAKGSGKL 205
Query: 246 FSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIF 304
FS +LLD D GEIR T F V D+ + + E G VY IS + A+KNF++L N++E+
Sbjct: 206 FSVNLLD-DTGEIRATAFTEVADKLFPVFEEGVVYYISAPCRVTLAKKNFSNLPNDYELQ 264
Query: 305 LEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-G 363
E + V+ E+ ++ P+ +F+F I +++S E +S +D IG++ V I KN
Sbjct: 265 FERDTEVEKA-EDQENKPQIRFNFTKIGDLDSVEKDSTIDTIGVLKEVGEVATITSKNTN 323
Query: 364 METQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS 423
+ +R L L D S SV LT+WG K E + +L+ K KV+DF G+S
Sbjct: 324 KDFSKRELTLADDSQTSVRLTIWG--------KTAESFEAPLESILAFKGVKVSDFGGRS 375
Query: 424 IGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIA--AGGAKNEIHKTVSQIK 481
+ + S + ++PD EAH+LR WF++ G+N AT S +A +GG+KNE K +SQI
Sbjct: 376 LSLLSSGSMMVDPDIDEAHKLRGWFNAVGQN-ATFSTHNNLASSSGGSKNE-SKLISQIM 433
Query: 482 NEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSG-NRWQCDRCNQ 540
E + P ++++RA + ++K+ + Y AC CNKKV + W C++C +
Sbjct: 434 EEESYLQDTPTYLSLRASVVYVKNTTVAYPAC----STPGCNKKVIEENPGAWWCEKCQK 489
Query: 541 EIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDD--VRFGEI 598
E YRY+L + D TG W++ F E+G+ I+G A E +K + +D+ F
Sbjct: 490 TYPEPLYRYVLSVNVADHTGTLWLSCFDEAGQTIVGMSANEAMKMKTDDEDNGTQNFLTA 549
Query: 599 IRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
++ + FR++ K E Y D+ + + V+ +NY+ E+ L LI +
Sbjct: 550 MQEATCKTFNFRVRGKMETYQDQPKPRYQVLNLYPLNYAQEANKLAQLIKQ 600
>gi|363754309|ref|XP_003647370.1| hypothetical protein Ecym_6168 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891007|gb|AET40553.1| hypothetical protein Ecym_6168 [Eremothecium cymbalariae
DBVPG#7215]
Length = 620
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 193/625 (30%), Positives = 322/625 (51%), Gaps = 56/625 (8%)
Query: 34 STQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLN 93
+T ++ LI+D A+L + + + + +K+G + +++ + ++ +K V+
Sbjct: 43 ATSKKNLILINDGTYHMKALLRGEASQKALSQNLKRGDIFRVVTGEPAVIKEKKKFVL-- 100
Query: 94 METIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNS 153
II D E ++ N + + + PN NL+ G
Sbjct: 101 ---IIDDFE-------------ITKRDADVNAHTEFIDAYFAAHPNE-VVNLEGVG---- 139
Query: 154 QNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAA 213
N G +P S T + G+ V+S + Q F + +++ I I
Sbjct: 140 -NEGQDMSP-SPTLGSGALGNPVQSVHRQSEVQLQQSNQFSGN----ESQKSKPIFAIEQ 193
Query: 214 LNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEI 273
L+PYQ W IKARV+ KGD++ ++N RG+GK+F+ + LD+ GEIR T FN +++EI
Sbjct: 194 LSPYQNMWTIKARVSFKGDIKTWHNQRGEGKLFNVNFLDT-SGEIRATAFNDNAMKYFEI 252
Query: 274 IEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISE 333
++ G+VY +SK ++P++ F++LK+ +E+ L+ + V+ C E D +PK FSF +
Sbjct: 253 LQEGKVYYVSKARIQPSKPQFSNLKHPYELQLDRDTVVEECFEATD-VPKMNFSFVKLDH 311
Query: 334 IESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG----DF 389
+ S E NS VDV+GI+ +VNP + K+G + RR + + D +G S+ + LW DF
Sbjct: 312 LSSMEANSSVDVLGIIQTVNPPFEMTAKSGKKFNRRDIVIVDDTGYSISVGLWNEQAVDF 371
Query: 390 CNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFD 449
EG V++VKS +V DF+GKS+ S+ L NPD EA+ ++ W++
Sbjct: 372 NLPEGS------------VIAVKSARVTDFAGKSLSMGFSSTLHPNPDIPEAYAIKGWYN 419
Query: 450 SGGKNAATVSISREIAAGGAKNEIHK--TVSQIKNEGLGRSEKPDWVTVRAFITFIKSDS 507
+ G S+ E GA I T+ + K E LGRSEK D+ V+ I F+K D+
Sbjct: 420 AKGSETNFHSLKTEAGESGAVKFIANRITIGRAKEENLGRSEKGDYFNVKGAINFLKVDN 479
Query: 508 FCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTA 566
F Y AC C KKV Q+ W+C++C + +RY+L I D+T W+T
Sbjct: 480 FAYPAC----SSEGCQKKVIEQTDGTWRCEKCQVDHPNPKWRYMLTISILDETSQIWLTL 535
Query: 567 FQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKI 626
F + E++LG A L LK D +F + +S N++ FR++ +E+ Y +E RV+
Sbjct: 536 FNDQAEKLLGMDANTLTKLKN--TDSEQFQRVTQSVQMNEFDFRIRAREDTYNEETRVRY 593
Query: 627 TVIRADQVNYSSESRYLLDLISKSF 651
TV+ + + +ES +L + +SK+F
Sbjct: 594 TVVNLYPLRWKTESEFLAEELSKTF 618
>gi|389641383|ref|XP_003718324.1| replication factor-A protein 1 [Magnaporthe oryzae 70-15]
gi|351640877|gb|EHA48740.1| replication factor-A protein 1 [Magnaporthe oryzae 70-15]
gi|440466778|gb|ELQ36022.1| replication factor-A protein 1 [Magnaporthe oryzae Y34]
gi|440480262|gb|ELQ60936.1| replication factor-A protein 1 [Magnaporthe oryzae P131]
Length = 610
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 202/643 (31%), Positives = 334/643 (51%), Gaps = 81/643 (12%)
Query: 22 PLVQVMDIKLIG-----STQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLI 76
P++Q + +KL+G ERYR ++SD + MLATQ N + Q+++G +V++
Sbjct: 31 PVLQCLQVKLLGQQPNAGAAERYRVVLSDVDNYIQCMLATQANHVIHDDQLQRGCIVRVK 90
Query: 77 DYICSTVQNRKIIVVLNMETI--ILDCEPIGNP-KIFSESELTAQKTIPSNNLPQPVRVN 133
Y +TV+ + ++V+L++E I + E IG P I +++E T TI
Sbjct: 91 SYQANTVKGKSVLVLLDLEVIQSLGVHEKIGEPASIEAKAENTTNTTIGG---------- 140
Query: 134 NYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNF 193
SG + GT P+ +RS PT
Sbjct: 141 --------------SGFY-------------GTKTEPDVKPQIRSQMPT----------- 162
Query: 194 RNHGPILKNEAP--ARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL 251
RN G + P I PI +++PYQ +W IKARV+ K D+R ++ A G+GK+FS +LL
Sbjct: 163 RNTGGGGASHGPGNVNIYPIESISPYQHKWTIKARVSQKSDIRTWHKASGEGKLFSVNLL 222
Query: 252 DSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATST 310
D + GEI+ T FN D+FY+I++ G+VY IS ++ A+K F +L N++E+ E +
Sbjct: 223 D-ETGEIKATGFNDQCDKFYDILQEGQVYYISTPCRVQMAKKQFTNLPNDYELTFEDGTQ 281
Query: 311 VDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK-NGMETQRR 369
++ E+ S+P+ +F+F +I E++ E ++ VDVIG++ V I K +G +R
Sbjct: 282 IEK-AEDQSSVPQVRFNFCNIQELQEVEKDATVDVIGVLKDVADVTQITSKASGKFFDKR 340
Query: 370 ILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPS 429
L L D SG SV +T+WG K + D V++ K KV DF G+S+ + S
Sbjct: 341 ELTLVDDSGYSVRMTIWG--------KTAQNFDAKSESVVAFKGAKVGDFGGRSLSLLSS 392
Query: 430 TQLFINPDFAEAHELREWFDSGGKNAATVSI-SREIAAGGAKNEIHKTVSQIKNEGLGRS 488
+ ++PD EAH L+ WFDS G+N + S +A + + T+ ++K + LG
Sbjct: 393 GTMTVDPDIPEAHRLKGWFDSSGRNDNFSTFNSNSVAGATGRQDQILTIHKVKEDNLGVD 452
Query: 489 EKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDY 547
+ + ++A + +I+ ++F Y +C + C+KKVT G+ W+C++C+ +Y
Sbjct: 453 DVV-YFALKATVVYIRQENFAYPSCL----NEGCSKKVTDLGDGSWRCEKCDVNHPRPEY 507
Query: 548 RYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYE-LQDDVRFGEIIRSRVFNQ 606
RY++ + D TG W++ F + G I+G A EL LK E + R E R +
Sbjct: 508 RYIMSVNVNDHTGQLWLSCFDDVGRIIMGKSADELMALKDENFEAFTREFENANCRKLS- 566
Query: 607 YLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
FR + K + +GD QRV+ V+ A ++++ SE+ L DLI +
Sbjct: 567 --FRCRAKMDTFGDNQRVRYQVMGATKMDWKSEAARLADLIKQ 607
>gi|452004612|gb|EMD97068.1| hypothetical protein COCHEDRAFT_1189989 [Cochliobolus
heterostrophus C5]
Length = 611
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 193/644 (29%), Positives = 328/644 (50%), Gaps = 84/644 (13%)
Query: 22 PLVQVMDIKLI------GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQL 75
P++Q + IK + + +R+R ++SD + M+AT N+ V +GQ+KKGS+V+L
Sbjct: 25 PVLQCVQIKTMEPKAGEANPVQRFRVVLSDIRNFIQTMIATTANEIVTSGQLKKGSIVRL 84
Query: 76 IDYICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQ-KTIPSNNLPQPVRV 132
+ Y V+++ I++++ +E + + + IG P+ AQ IP NN
Sbjct: 85 LKYNPQRVKDKNILIIMELEVLSQYGELDKIGQPEALDTKPADAQPAAIPGNNF------ 138
Query: 133 NNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPN 192
Y + + Q S + NPG+ S P+
Sbjct: 139 --YGSKPAPAPQPQRSLPTHQSNPGTSSHPH----------------------------- 167
Query: 193 FRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLD 252
+ PI +L+PY +W I+AR T K D++ ++N +G GK+FS +LLD
Sbjct: 168 ---------------LYPIESLSPYAHKWTIRARCTHKSDMKEWHNQKGTGKLFSVNLLD 212
Query: 253 SDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTV 311
D GEIR T F V D+ + + E G VY IS + A+KNF++L N++E+ E + V
Sbjct: 213 -DTGEIRATAFTEVADKLFPVFEEGVVYYISAPCRVTLAKKNFSNLPNDYELQFERDTEV 271
Query: 312 DLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRI 370
+ E+ D+ P+ +F+F I ++ S E ++ +D IG++ V I KN + +R
Sbjct: 272 EKA-EDQDNKPQIRFNFTKIGDLTSVEKDTTIDTIGVLKEVAEVTTITSKNTNKDFSKRE 330
Query: 371 LNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPST 430
L L D S SV LT+WG K E DV +++ K KV+DF G+S+ + S
Sbjct: 331 LTLADDSQTSVRLTIWG--------KTAESFDVPLESIVAFKGVKVSDFGGRSLSLLSSG 382
Query: 431 QLFINPDFAEAHELREWFDSGGKNAATVSISREIAA--GGAKNEIHKTVSQIKNEGLGRS 488
+ ++PD EAH+LR WF++ G+N AT S + + + GG+KN+ K +S I E
Sbjct: 383 SMMVDPDIDEAHKLRGWFNAVGQN-ATFSTHQSMVSNTGGSKNDA-KPISAIIEEEAYLQ 440
Query: 489 EKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSG-NRWQCDRCNQEIDECDY 547
+ P ++++RA + +++ +F Y AC + CNKKV + W C++C E +Y
Sbjct: 441 DTPSYMSLRASVVYVRDSTFAYPAC----STQGCNKKVIEENPGSWWCEKCQAAFPEPNY 496
Query: 548 RYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDD--VRFGEIIRSRVFN 605
RY+L A + D TG W++ F E+G+ I+G A E +K + +++ F +++
Sbjct: 497 RYVLSANVGDHTGTLWLSCFDEAGQAIIGVSANEAMKMKMDDEENGTTNFRNVMQEATCK 556
Query: 606 QYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+ FR++ K E Y D+ + + V+ +N++ E+ L LI +
Sbjct: 557 TFNFRVRAKMETYQDQPKPRYQVMNIYPLNFAQEANKLAQLIKQ 600
>gi|406602762|emb|CCH45720.1| Replication protein A 70 kDa DNA-binding subunit [Wickerhamomyces
ciferrii]
Length = 608
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 180/629 (28%), Positives = 328/629 (52%), Gaps = 63/629 (10%)
Query: 24 VQVMDIKLI-GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICST 82
+QV +++ I +R R L+SD V + HA++ + + ++ S+V T
Sbjct: 27 LQVSNVRPIPNEAGKRLRLLVSDGVFSTHAVVRPEGVAYCEENGFQRSSIV--------T 78
Query: 83 VQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNY--SAPNS 140
+Q +I + GN + S+L ++++ S +++Y + P
Sbjct: 79 IQRYEI-----------ERMGAGNKHVIIISDLVIKQSVASKVGTAIESLDDYFRAHPEE 127
Query: 141 GTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPIL 200
+ +G N+ P + AP + QP P QP + +
Sbjct: 128 DIYQSAEAGEENTPTPQA---------EAP------KQEQPKQSIP-QPQSSTNTNKASS 171
Query: 201 KNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRV 260
+ P+ I I L+PYQ W IKARV+ KG++R ++N RG+GK+F+ +LLD + EIR
Sbjct: 172 NQKKPSNIYAIDQLSPYQNIWTIKARVSFKGEMRTWSNQRGEGKLFNVNLLD-ETDEIRA 230
Query: 261 TCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDS 320
T FN ++FY +++ G+ Y +SK ++P++ F++LK+ +E+ L+ + ++ C + DD
Sbjct: 231 TAFNDNAEKFYNLLQEGKAYYVSKARIQPSRPQFSNLKHPYELQLDRDTVIEECFDADD- 289
Query: 321 IPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRS 380
+PK F F +++I+ E +SI+DV+G++ VNP I K G RR + + D S +
Sbjct: 290 VPKLSFDFVKLNKIQDLEADSIIDVVGVIKEVNPHFQITSKAGRAYDRRDITVVDDSQFA 349
Query: 381 VELTLWG----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP 436
+ + LW +F EG V+++K KV+DF+GK++ PS + NP
Sbjct: 350 ISVGLWNKTALEFDTPEGT------------VIAIKGAKVSDFNGKTLSITPSGTITTNP 397
Query: 437 DFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTV 496
D EA+ ++ W+D+ G+N ++ E+ E KT+ ++N LG EKPD+ T+
Sbjct: 398 DAPEAYAIKGWYDAQGRNENFQTLKTELGTRKTSIEERKTIGDVQNLELGLGEKPDYFTI 457
Query: 497 RAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQI 555
++ + F+K+D+F Y AC CN+KV Q W+C++C+ YRY+L +
Sbjct: 458 KSSVNFLKTDNFSYPAC----SSEGCNRKVIEQHDGTWRCEKCDINHAVPLYRYILTISV 513
Query: 556 QDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKE 615
D TG WVT F++ + +LG A +L +KY+ +D+ F I+ N++ FR++ ++
Sbjct: 514 VDPTGQLWVTLFEDQAKALLGYSANDL--VKYKEEDNSLFTSIVSKIQMNEFEFRIRARQ 571
Query: 616 ELYGDEQRVKITVIRADQVNYSSESRYLL 644
+ Y + R++ + +++++S+E+ YL+
Sbjct: 572 DNYNGQVRIRYNAVNVNKIDFSNEAEYLV 600
>gi|393216703|gb|EJD02193.1| replication factor-a protein [Fomitiporia mediterranea MF3/22]
Length = 605
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 193/637 (30%), Positives = 314/637 (49%), Gaps = 74/637 (11%)
Query: 23 LVQVMDIKLIGSTQE-----RYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLID 77
++Q++ +K IG+ +E R+R ++SD V AMLATQL V G++ K SVV++
Sbjct: 30 VLQLLSLKKIGAAREGAAPDRFRLVVSDGVHYTQAMLATQLTGMVDEGEIAKYSVVKVEK 89
Query: 78 YICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSA 137
C+ VQN+K++++L + P+GN P + P
Sbjct: 90 LTCNNVQNKKLLILLALT-------PVGN---------------PGEKIGDP-------- 119
Query: 138 PNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHG 197
+L+ G S + + +TP + P A Q R +G
Sbjct: 120 -----GSLEVPGQNASSSTEAQATPTTAV-NTPVAQQQKSVQSQKPPQQQQQ--QQRANG 171
Query: 198 PILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGE 257
P+ + PI L+PYQ +W I+ARVT K D+R Y+ +G+GK+F+ L+D D GE
Sbjct: 172 PV--------VFPIEGLSPYQNKWTIRARVTVKSDVRHYSTPKGEGKIFTVTLMD-DSGE 222
Query: 258 IRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEE 317
IR T FN VD+FY+ +E G+VY +SK + A+K F++++NE+E+ L + + C ++
Sbjct: 223 IRATGFNHQVDQFYDKLEEGKVYYVSKARVNLAKKKFSNVQNEYELMLGTETEISECADQ 282
Query: 318 DDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK-NGMETQRRILNLKDT 376
+ P+ + F +SE+ + E ++ DVIGIV V+ I+ K G ++R L L D
Sbjct: 283 -AAAPQITYHFVKLSELGNQEKDTTCDVIGIVKDVSDVTEIVAKATGRTIKKRELTLIDL 341
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP 436
S +V +TLWG K E VL+ K +V DF G+S+ +T + +NP
Sbjct: 342 SEFAVRMTLWG--------KQAESYTAEEHAVLAFKGARVGDFGGRSLSMSNATHMSVNP 393
Query: 437 DFAEAHELREWFDSGGKNAA----TVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPD 492
D EAH LR WFDS A + S G + E KT+ +++ + +
Sbjct: 394 DINEAHVLRGWFDSLNSPPAFKSHSGGSSSAGGFGDIRREAMKTLLEVRALQENVPDGGE 453
Query: 493 WVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQ 552
+ R I IK+D+ Y ACP CNKKV + W+C++C++ E +YR+++
Sbjct: 454 NFSCRGTILHIKADNLFYPACP------TCNKKVIEGSEGWRCEKCDRAYTEPEYRFMMS 507
Query: 553 AQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLK 612
+ D TG W+ F + G + G A EL+ LK +D+ + I N Y F +
Sbjct: 508 MSVADHTGQVWLNGFNDVGLVVFGKTASELHELKE--RDESAYTAAIARATCNTYNFNCR 565
Query: 613 IKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
K++ Y ++ RV+ + + ++Y E+ L D + K
Sbjct: 566 AKQDTYNEQSRVRFGIQKIMPLDYKLEAGLLRDRLKK 602
>gi|428164777|gb|EKX33791.1| replication protein A1, 70kDa [Guillardia theta CCMP2712]
Length = 702
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 220/721 (30%), Positives = 361/721 (50%), Gaps = 98/721 (13%)
Query: 1 MPVNLTPNSISLI-----NGGDVNSKPLVQVMDIKLIGS----TQERYRFLISDSVSTQH 51
M N+T ++ I D +VQV+DIK IG+ + ERYR +ISD+
Sbjct: 1 MAANITQGAVREIYWNNTGSADTGKSYVVQVIDIKKIGTNNGTSGERYRLVISDTSFFCQ 60
Query: 52 AMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILD-CEPIGNP-KI 109
AMLATQLN V ++ K +V++ D IC+ VQ+R+I+++L++E + IG P I
Sbjct: 61 AMLATQLNGIVNAKELDKFCIVEIKDCICNVVQSRRIVIILSIEVKGPPMAQMIGKPVSI 120
Query: 110 FSESELTAQKT-IPSNNLPQPVRVNNYSAPNS---------------------------- 140
S + + Q++ P N +P + +AP S
Sbjct: 121 DSAGDPSGQQSKAPQNAMPSSAAPSYSTAPTSVGSKNQSAVNPPPENNYDRQRQFTQANV 180
Query: 141 ------GTF-NLQNSGTFNSQNPGSFSTPNSGTFRAPNAGS---IVRSFQPTVQPPYQPP 190
G F N S +F +QN PN RA N + V++ V P
Sbjct: 181 KSERSQGDFVNAMGSNSFQNQN----DMPNR-MERASNESANPYAVKTGNSFVNSSTGFP 235
Query: 191 PNFR---NHGPILKNEAPA-RIIPIAALNPYQGRWAIKARVTAK-----GDLRRYNNA-- 239
N + N P+ ++E + + P+ PY G+ I + GD + + +
Sbjct: 236 NNNQVVFNSNPVQEHERNSFKSQPMGYSGPYAGQGPISYGMGTSMNQFAGDGMKQSGSSD 295
Query: 240 --------RGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQ 291
+G+G++F+ D++D G +IR T FN D+++ ++ +VY I G++K A
Sbjct: 296 HAFRNTMTKGEGRLFNIDIMDHTG-DIRGTFFNDDADKWFPHLQANKVYKIRGGTIKQAN 354
Query: 292 KNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVIS 351
+ FN +E+EI ST D+ D PK ++FR I EIE+ E SIVDV+ +V
Sbjct: 355 RKFNTTSSEYEITFNRDSTFDIVA--DSEAPKVSYNFRKIEEIENTEPQSIVDVLAVVHD 412
Query: 352 VNPSVPILRKNGM----ETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFP 407
V P + K+G + +R ++L DT G++++LTLW D +K+ +M + P
Sbjct: 413 VQPLGSVTVKSGSNAGNQIAKRDVSLLDTGGKTIKLTLWDD--HKDVVTENDMSN----P 466
Query: 408 VLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG 467
V+++K +V+DF+G+S+ T S+ + +NPD EAH L+ W+D GK+A ++ +++G
Sbjct: 467 VIAIKGVRVSDFNGRSLSTTRSSMIEMNPDLQEAHLLKGWYDCHGKSAVFQAVGGSMSSG 526
Query: 468 GAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKKV 526
+ KT+SQIK E LG +EKPD+ T+RA++T+ K D ++ Y A P + KKV
Sbjct: 527 --SKDSRKTISQIKGENLGNAEKPDYFTLRAWVTYFKHDGTWNYPANP------ETKKKV 578
Query: 527 TQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLK 586
G+ W + Q I+ C+ RY++ D TG W +AF + G +LG A EL LK
Sbjct: 579 IAHGDSWFDESTQQTIERCERRYVMNLSCSDFTGSHWFSAFNDQGIALLGKTADELQELK 638
Query: 587 YELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDL 646
+ D + ++ VF Y+ +++ K E + DE RVK T++ V++ + + +L
Sbjct: 639 DSMNPD--YEATWQASVFKPYVLKVRAKAETWQDETRVKCTIMEVKPVDWREGATEIRNL 696
Query: 647 I 647
I
Sbjct: 697 I 697
>gi|291221744|ref|XP_002730881.1| PREDICTED: replication protein A1-like [Saccoglossus kowalevskii]
Length = 585
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 204/666 (30%), Positives = 317/666 (47%), Gaps = 112/666 (16%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLIGST----QERYRFLISDSVSTQHAMLAT 56
M +L+ I I+ GD KP+ Q++ +K I ST +RYR L+SD + AMLAT
Sbjct: 1 MSFSLSSGCIEAISSGDTPQKPIFQILGLKKISSTVQSSTDRYRLLLSDGQRSHSAMLAT 60
Query: 57 QLNDRVKTGQVKKGSVVQLIDYICSTV-QNRKIIVVLNMETIILDCEPIGNPKIFSESEL 115
QLN +V G++ SV+QL YIC+T+ N+++I++L E L
Sbjct: 61 QLNKKVTDGELSVRSVIQLNKYICNTIADNKRVIIIL-------------------EVNL 101
Query: 116 TAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSI 175
A + + + PV + + P N Q P + T G
Sbjct: 102 IAGQNQVQDKIGNPVPIGQPAPP----------AQQNGQAPHNAQTGRGG---------- 141
Query: 176 VRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRR 235
+ S +PT PY N P + +++ PIA+L PYQ RW I+ARVT KG++R
Sbjct: 142 LMSSRPTTTMPYNAA-NEMPKMPTTPSGGMSKVFPIASLTPYQNRWTIRARVTNKGNIRH 200
Query: 236 YNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFN 295
+NN+RG+G +FS DL+D D EIR T FN +++++++VG+VYLIS+G+LK A K +
Sbjct: 201 WNNSRGEGCLFSMDLID-DSAEIRATAFNDQCKKYFDMVQVGQVYLISRGTLKTANKQYT 259
Query: 296 HLKNEWEIFLEATSTVDLCTEEDDS-IPKQQFSFRHISEIESAENNSIVDVIGIVISVNP 354
+KN++E+ + + V+LC + + S +P QF F+ I ++E +++VDVIG+ S +
Sbjct: 260 SIKNDYEMSFTSETVVELCNDAEASDVPTVQFDFKQIGQLEDIPKDTMVDVIGVCKSFSD 319
Query: 355 -SVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKS 413
S + R E +R L+L D S + V LTLWG D+ F ++ ++
Sbjct: 320 VSTIVTRSTNRELSKRELHLVDDSEKVVTLTLWG-------------TDLTRFWIVRTRT 366
Query: 414 GKVNDFSG--KSIGTIPSTQ------------LFINPDFAEAHELREWFDSGGKNAATVS 459
FS S T Q +++ P H + W+D G S
Sbjct: 367 -----FSNCPASWATFHDVQVVCVIYRTREGFVYLRP----THTI-HWYDGEGNCKTITS 416
Query: 460 ISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGD 519
IS + GG K ++K +GLG EK ACP
Sbjct: 417 ISEQRTGGGGGTN-WKNFIEVKKQGLGSGEK---------------------ACP----S 450
Query: 520 RQCNKKVTQ-SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCP 578
+CNKKV + S ++C++C +E + YR LL D WVT FQ+ + ILG
Sbjct: 451 AECNKKVVENSDGSYRCEKCAKEYPDFKYRMLLVINTVDFGDGQWVTCFQDQAQVILGGN 510
Query: 579 AKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSS 638
E + ++ F + + F Y R++IK+E Y DE R+K + + A ++Y
Sbjct: 511 TAEHIGSLKDSNNESEFEAVFQEANFKSYNLRMRIKQETYNDETRLKCSCVEAKPLDYKE 570
Query: 639 ESRYLL 644
SR L+
Sbjct: 571 HSRRLI 576
>gi|145234512|ref|XP_001400627.1| replication factor A protein 1 [Aspergillus niger CBS 513.88]
gi|134057574|emb|CAK37984.1| unnamed protein product [Aspergillus niger]
Length = 606
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 194/638 (30%), Positives = 338/638 (52%), Gaps = 75/638 (11%)
Query: 21 KPLVQVMDIKLIGSTQ---ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLID 77
+P+VQ + IK + + Q ERYR + SD + MLATQLN V + ++KG V+L
Sbjct: 27 EPVVQCVQIKPLPAQQSHPERYRAVFSDISNYVQTMLATQLNPMVSSKLLRKGCFVRLKS 86
Query: 78 YICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNY 135
+ ++V+ +KI+++L++E + + + E IG+PK +K P+
Sbjct: 87 FQANSVKGKKILIILDLEVLEGLGEAEKIGDPKPLESKTDEDEKHQPTT----------- 135
Query: 136 SAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRN 195
+ ++G + S+ G+ N+G V+S +P + +
Sbjct: 136 ---------ISSNGFYGSKISGAQVQSNTG----------VQSARPVLAATH-------- 168
Query: 196 HGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDG 255
A I PI A++PY +W IKAR T+K ++R ++N +G++FS +LLD D
Sbjct: 169 ----------ATIYPIEAISPYSHKWTIKARCTSKTNIRTWHNRNTEGRLFSVNLLD-DS 217
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
GEIR T FN D Y++ + G VY IS ++ A+K F +L N++E+ E + V+
Sbjct: 218 GEIRATGFNDQCDMLYDVFQEGGVYYISNCRVQIAKKQFTNLNNDYELTFERDTVVEKAE 277
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILNLK 374
++ D +P+ +F+F I +++S E ++ +DVIG++ I K + +R L +
Sbjct: 278 DQTD-VPQVRFNFTSIGDLQSVEKDTTIDVIGVLKEAMDVTQITSKTTNKPYDKRELIMV 336
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
D +G SV LT+WG K + V++ K KV+DF G+S+ + S + +
Sbjct: 337 DNTGFSVRLTIWGSTAQKFNASPES--------VIAFKGVKVSDFGGRSLSLLSSGSMAV 388
Query: 435 NPDFAEAHELREWFDSGGKNAATVSISREI--AAGGAKNEIHKTVSQIKNEGLGRSEKPD 492
+PD EAH+L+ W+D+ G++ S + + A+ K++ KT++QI+ E LG SE+
Sbjct: 389 DPDIEEAHKLKGWYDAQGRDENFSSHASLLGTASSTMKSDQFKTIAQIREEQLGMSEEAV 448
Query: 493 WVTVRAFITFIKSD--SFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYRY 549
+ +++A + +IK D SF Y AC L G CNKKVT+ +W+C+RC++ + DYRY
Sbjct: 449 YFSLKATVIYIKQDNMSFAYPAC-LSEG---CNKKVTELDPGQWRCERCDKTHPQPDYRY 504
Query: 550 LLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLF 609
++ + D TG W++ F + G ++ A +L ++ D+ G++ + + F
Sbjct: 505 IMHVNVSDHTGQLWLSCFDDVGRSMMDISANQL--MELFQTDEKAAGDVFQDANCRTWNF 562
Query: 610 RLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
R + K + +G++QR++ V A +NYS E+ L DLI
Sbjct: 563 RCRAKIDHFGEQQRIRYQVSSAKPINYSHEAGRLADLI 600
>gi|350635289|gb|EHA23651.1| hypothetical protein ASPNIDRAFT_174835 [Aspergillus niger ATCC
1015]
Length = 592
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 194/638 (30%), Positives = 338/638 (52%), Gaps = 75/638 (11%)
Query: 21 KPLVQVMDIKLIGSTQ---ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLID 77
+P+VQ + IK + + Q ERYR + SD + MLATQLN V + ++KG V+L
Sbjct: 13 EPVVQCVQIKPLPAQQSHPERYRAVFSDISNYVQTMLATQLNPMVSSKLLRKGCFVRLKS 72
Query: 78 YICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNY 135
+ ++V+ +KI+++L++E + + + E IG+PK +K P+
Sbjct: 73 FQANSVKGKKILIILDLEVLEGLGEAEKIGDPKPLESKTDEDEKHQPTT----------- 121
Query: 136 SAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRN 195
+ ++G + S+ G+ N+G V+S +P + +
Sbjct: 122 ---------ISSNGFYGSKISGAQVQSNTG----------VQSARPVLAATH-------- 154
Query: 196 HGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDG 255
A I PI A++PY +W IKAR T+K ++R ++N +G++FS +LLD D
Sbjct: 155 ----------ATIYPIEAISPYSHKWTIKARCTSKTNIRTWHNRNTEGRLFSVNLLD-DS 203
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
GEIR T FN D Y++ + G VY IS ++ A+K F +L N++E+ E + V+
Sbjct: 204 GEIRATGFNDQCDMLYDVFQEGGVYYISNCRVQIAKKQFTNLNNDYELTFERDTVVEKAE 263
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILNLK 374
++ D +P+ +F+F I +++S E ++ +DVIG++ I K + +R L +
Sbjct: 264 DQTD-VPQVRFNFTSIGDLQSVEKDTTIDVIGVLKEAMDVTQITSKTTNKPYDKRELIMV 322
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
D +G SV LT+WG K + V++ K KV+DF G+S+ + S + +
Sbjct: 323 DNTGFSVRLTIWGSTAQKFNASPES--------VIAFKGVKVSDFGGRSLSLLSSGSMAV 374
Query: 435 NPDFAEAHELREWFDSGGKNAATVSISREI--AAGGAKNEIHKTVSQIKNEGLGRSEKPD 492
+PD EAH+L+ W+D+ G++ S + + A+ K++ KT++QI+ E LG SE+
Sbjct: 375 DPDIEEAHKLKGWYDAQGRDENFSSHASLLGTASSTMKSDQFKTIAQIREEQLGMSEEAV 434
Query: 493 WVTVRAFITFIKSD--SFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYRY 549
+ +++A + +IK D SF Y AC L G CNKKVT+ +W+C+RC++ + DYRY
Sbjct: 435 YFSLKATVIYIKQDNMSFAYPAC-LSEG---CNKKVTELDPGQWRCERCDKTHPQPDYRY 490
Query: 550 LLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLF 609
++ + D TG W++ F + G ++ A +L ++ D+ G++ + + F
Sbjct: 491 IMHVNVSDHTGQLWLSCFDDVGRSMMDISANQL--MELFQTDEKAAGDVFQDANCRTWNF 548
Query: 610 RLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
R + K + +G++QR++ V A +NYS E+ L DLI
Sbjct: 549 RCRAKIDHFGEQQRIRYQVSSAKPINYSHEAGRLADLI 586
>gi|365990984|ref|XP_003672321.1| hypothetical protein NDAI_0J01860 [Naumovozyma dairenensis CBS 421]
gi|343771096|emb|CCD27078.1| hypothetical protein NDAI_0J01860 [Naumovozyma dairenensis CBS 421]
Length = 618
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 159/456 (34%), Positives = 263/456 (57%), Gaps = 32/456 (7%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I I L+PYQ W IKARV+ KG++++++N RGDG +F+ + LD+ GEIR T FN
Sbjct: 181 IFAIEQLSPYQNIWTIKARVSYKGEIKKWHNQRGDGSLFNVNFLDT-SGEIRATAFNENA 239
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
++F EI++ G+VY +SK L+PA+ F +L + +E+ L+ + ++ C +ED+ +PK F+
Sbjct: 240 EKFSEILQEGKVYYVSKARLQPAKPQFTNLTHPYELNLDRDTVIEECFDEDN-VPKTHFN 298
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
F + I + ENN+ VDV+G++ +VNP + + G RR +++ D SG + + LW
Sbjct: 299 FIKLDAIPNQENNTNVDVLGVIQTVNPHFELTSRAGKRFDRRDISIVDESGFEISVGLWN 358
Query: 388 ----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHE 443
DF EG V+++K +V+DF GKS+ ++ L NP+ EA+
Sbjct: 359 QQAIDFNLPEGS------------VVAIKGVRVSDFGGKSLSMGFNSTLVPNPEIPEAYS 406
Query: 444 LREWFDSGGKNAATVSISRE-----IAAGGAKNEIHK--TVSQIKNEGLGRSEKPDWVTV 496
L+ W+DS G+N S+ +E I++ + I + T+++ + E LG+SEK D+ +V
Sbjct: 407 LKGWYDSTGRNGNFTSLKQEAGSNNISSANQEKFISQRITITRAQAENLGKSEKGDYFSV 466
Query: 497 RAFITFIKSDSFCYTACPLMIGDRQCNKKV-TQSGNRWQCDRCNQEIDECDYRYLLQAQI 555
+A I+F+K D+F Y AC + CNKKV Q W+C++C + +RY+L +
Sbjct: 467 KAAISFLKVDNFAYPAC----SNENCNKKVIEQPDGTWRCEKCETNNEAPQWRYMLTISV 522
Query: 556 QDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKE 615
D+T W+T F + E++L A +L LK D F +I +S NQY FR++ +E
Sbjct: 523 MDETNQLWLTLFNDQAEQLLDIDANKLIALKE--NDPEEFTKITQSIQMNQYDFRIRARE 580
Query: 616 ELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSF 651
+ Y D+ R++ TV ++NY E+ YL +S +
Sbjct: 581 DSYNDQTRIRYTVANLHKLNYKGEADYLATRLSNAL 616
>gi|366997334|ref|XP_003678429.1| hypothetical protein NCAS_0J01120 [Naumovozyma castellii CBS 4309]
gi|342304301|emb|CCC72091.1| hypothetical protein NCAS_0J01120 [Naumovozyma castellii CBS 4309]
Length = 613
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 190/631 (30%), Positives = 320/631 (50%), Gaps = 77/631 (12%)
Query: 33 GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVL 92
G+ + +ISD V A+L Q + ++ ++++G V++++ + V+ +K V+L
Sbjct: 42 GNPSRKNLIMISDGVYHMKALLRNQAASKFQSLELQRGDVIRVLAAEPAIVKEKKKYVIL 101
Query: 93 --NMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGT 150
+ E + E + F +S PN L + G+
Sbjct: 102 IDDFELVQSGVELVNQSSTFLDSYFAEH-------------------PNE---TLSDDGS 139
Query: 151 FNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIP 210
NS N +AP F PT Q Q + P ++ I
Sbjct: 140 -NSNN------------QAP--------FVPTPQQQPQHSTTSSTNFPSSHSQKSKAIFA 178
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
I L+PYQ W IKARV+ KG++++++N RGDG +F+ + LD+ GEIR T FN ++F
Sbjct: 179 IEQLSPYQNAWTIKARVSYKGEIKKWHNQRGDGCLFNVNFLDT-SGEIRATAFNENAEKF 237
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRH 330
YEI++ G+VY +SK L+PA+ F +L + +E+ ++ + V+ C +ED+ +PK F+F
Sbjct: 238 YEILQEGKVYYVSKARLQPAKPQFTNLTHPYELSMDRETVVEECHDEDN-VPKTHFNFIK 296
Query: 331 ISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG--- 387
+ +++ ENN+ VDV+GI+ +VNP + + G RR +++ D +G + + LW
Sbjct: 297 LDAVQNQENNTNVDVLGIIKTVNPHFELTSRAGKRFDRRDISIVDDTGFEISVGLWNQQA 356
Query: 388 -DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELRE 446
DF EG V+++K +V+DF GKS+ ++ L NP+ EA L+
Sbjct: 357 LDFNLPEGS------------VVAIKGVRVSDFGGKSLSMGFNSTLVSNPEIPEAFSLKG 404
Query: 447 WFDSGGKNAATVSISREIAAGGAKNE-IHK------TVSQIKNEGLGRSEKPDWVTVRAF 499
W+D+ G+ S+ +E G E + K T+S+ E LG+SEK D+ +V+A
Sbjct: 405 WYDNTGRTGHFTSLKQENGMGAISAENLTKFISQRITISRAIAENLGKSEKGDYFSVKAA 464
Query: 500 ITFIKSDSFCYTACPLMIGDRQCNKKV-TQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQ 558
I+F+K D+F Y AC + CNKKV Q W+C++C ++RY+L I D+
Sbjct: 465 ISFLKVDNFAYPAC----SNENCNKKVIEQPDGTWRCEKCETNNPAPEWRYMLTISIMDE 520
Query: 559 TGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELY 618
T W+T F E +++L A L LK D F + ++ N+Y FR++ +E+ Y
Sbjct: 521 TNQLWLTLFNEQAQQLLEVDANTLIALKD--NDPEEFTKRTQNIQMNEYDFRIRAREDNY 578
Query: 619 GDEQRVKITVIRADQVNYSSESRYLLDLISK 649
D+ R++ TV ++NY E+ +L +SK
Sbjct: 579 NDQTRIRYTVANIHKLNYKVEADFLATELSK 609
>gi|360042651|emb|CCD78061.1| putative replication factor A 1, rfa1 [Schistosoma mansoni]
Length = 560
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 190/615 (30%), Positives = 317/615 (51%), Gaps = 84/615 (13%)
Query: 53 MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSE 112
MLATQLN ++ ++ +V+++ ++C+ +QN K+++ I+LD + +G ++
Sbjct: 1 MLATQLNHLIEENKLVNNTVIRVRKHVCNNIQNNKVVL------IVLDLDILG-----TD 49
Query: 113 SELTAQKTIPSNNLPQPVRVNNYS-APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPN 171
K+ + +P ++S P T ++G F+ P + TP G
Sbjct: 50 DSSGGVKSEQPPTVAKPATTTSHSYEPEQKTPPKSSTGPFSGGQPSTPGTPGCGL----- 104
Query: 172 AGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKG 231
R+ PI +LNPYQ RW I+ARV+ K
Sbjct: 105 ----------------------------------PRVFPIQSLNPYQNRWTIRARVSQKS 130
Query: 232 DLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIE-----VGRVYLISKGS 286
+R ++ DGK+F+F L+D + GEIRVT FNA VD+FY++IE V +VY +S+ +
Sbjct: 131 AIRTWSKQGRDGKLFNFTLVD-ESGEIRVTGFNAEVDKFYDMIEASNMFVNKVYYVSRAN 189
Query: 287 LKPAQKNFNHLKNEWEIFLEATSTVDLCTEED-DSIPKQQFSFRHISEIESAENNSIVDV 345
LK A K FN N++E+ L + S V C + D S+P+ F+F I ++++ S VD+
Sbjct: 190 LKAANKQFNTTNNDYEMTLHSDSQVLPCEDSDTSSLPETHFNFISIGKLDTQSPGSFVDI 249
Query: 346 IGIVISVNPSVPILRKNGM-ETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVG 404
+G+V I K E ++R L L D+S V LTLW G++ + V
Sbjct: 250 VGVVHECGEVQSITAKASQRELRKRELGLVDSSNCLVRLTLW-------GEEAENFVGAS 302
Query: 405 FFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP-DFAEAHELREWFDSGGKNAATVSISRE 463
PV+ +K+ K++DF+G+S+ P++ L I+P + EA L+ W++ G+ + + E
Sbjct: 303 -HPVIVIKAAKISDFNGRSLSVSPTSSLLISPTNIPEAIRLKGWYEHEGRFSNFETFRSE 361
Query: 464 I--AAGGAKNEIHKT--------VSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTAC 513
+ ++GGA + + +K G+G + K D+ T +A + F+K ++F Y AC
Sbjct: 362 MVGSSGGADGVSSSSGVLGGWNLLQDVKASGVGANVKADYFTCKATVVFMKKENFMYQAC 421
Query: 514 PLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGE 572
CNKKV GN ++C++C +E +C +R LL A+I D TG WVT FQ++ E
Sbjct: 422 ----STEGCNKKVIDLGNGLYRCEKCARETPDCKWRLLLMAKIADITGDLWVTCFQDAAE 477
Query: 573 EILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRAD 632
+LG A++L +K QD+ + ++ FN ++FRL+ K + Y DE+R+++ V
Sbjct: 478 VLLGQTAEKLGTIK-STQDETQLEKVFIESAFNSWIFRLRAKVDRYNDEERLRVVVADVK 536
Query: 633 QVNYSSESRYLLDLI 647
V+ SR LL I
Sbjct: 537 PVDLVDYSRRLLKAI 551
>gi|46137213|ref|XP_390298.1| hypothetical protein FG10122.1 [Gibberella zeae PH-1]
Length = 607
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 192/636 (30%), Positives = 327/636 (51%), Gaps = 71/636 (11%)
Query: 22 PLVQVMDIKLIGSTQE---RYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
P++Q + +K + + + R+R ++SD MLATQ N V ++ +G ++ Y
Sbjct: 29 PVLQCLQVKQMAPSAQGGDRFRLVMSDGQHYVQTMLATQANHVVHDNKLVRGCFARIKQY 88
Query: 79 ICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAP 138
+ ++ + I+V+L++E I E +G + E PS
Sbjct: 89 TPNNLKGKNILVILDIEVI----ESLGIQEKIGE---------PS--------------- 120
Query: 139 NSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGP 198
F+ + +G ++ G F G + + + Q P +P +
Sbjct: 121 ---AFDAKPAGQESAIAGGDFY----GVKKEESKTQPQQFQQQQQSMPSRPAMH------ 167
Query: 199 ILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEI 258
A + I PI L+P+ +W IKARVTAK D++ ++ A G+GK+FS +LLD + GEI
Sbjct: 168 -----AGSNIYPIEGLSPFAHKWTIKARVTAKSDIKTWHKATGEGKLFSVNLLD-ESGEI 221
Query: 259 RVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEE 317
+ T FN D Y+ ++ G VY IS ++ A+K F++L N++E+ E + V+ E+
Sbjct: 222 KATGFNDQCDALYDQLQEGSVYYISTPCRVQLAKKQFSNLPNDYELTFERDTVVEK-AED 280
Query: 318 DDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDT 376
++P+ +F+F I E++S E ++ VDVIG++ V I +K+G Q+R L L D
Sbjct: 281 QTNVPQVRFNFCSIQELQSVEKDNTVDVIGVLKEVGEIGDITSKKDGRPFQKRELTLVDD 340
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP 436
+G SV +T+WG N D V++ K KV+DF GKS+ + S + ++P
Sbjct: 341 TGFSVRVTIWGKNANS--------FDAAPESVVAFKGTKVSDFGGKSLSLLSSGTMTVDP 392
Query: 437 DFAEAHELREWFDSGGKNAATVSISREIAAGGA--KNEIHKTVSQIKNEGLGRSEKPDWV 494
D +AH L+ W+DS G+ + + G A + E KT++Q+K+E LG ++ +
Sbjct: 393 DIPDAHRLKGWYDSAGRTDTFATHQNMASVGSATGRKEDLKTIAQVKDENLGMDDQA-YY 451
Query: 495 TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQA 553
T++A I F+K ++FCY AC L G CNKKVTQ + WQC++CN ++ +YRY+L
Sbjct: 452 TIKATIVFVKQENFCYAAC-LSQG---CNKKVTQMPDGTWQCEKCNLSHEKPEYRYVLSL 507
Query: 554 QIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKI 613
+ D T W+T F + G +++G A E+ LK DD + ++ FR +
Sbjct: 508 NVADHTSHQWLTGFDDFGRQVMGRTADEMMELKE--NDDTKLTAAFEEANCKKFTFRCRA 565
Query: 614 KEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
K + +G+ QR++ V+ +++ SE L +LI +
Sbjct: 566 KMDNFGEAQRIRYQVMSVTPLDFKSEGTKLAELIKQ 601
>gi|195037625|ref|XP_001990261.1| GH19242 [Drosophila grimshawi]
gi|193894457|gb|EDV93323.1| GH19242 [Drosophila grimshawi]
Length = 602
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 168/440 (38%), Positives = 250/440 (56%), Gaps = 22/440 (5%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
PIA+L+PYQ +W IKARVT+K +R ++NARG+GK+FS DL+D + GEIR T F D+
Sbjct: 167 PIASLSPYQNKWVIKARVTSKTAIRTWSNARGEGKLFSMDLMD-ESGEIRATAFKEQCDK 225
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD-SIPKQQFSF 328
FY++IEV VY SK LKPA K ++ LKN++E+ + V LC + DD IP+ +F
Sbjct: 226 FYDLIEVDNVYFFSKCQLKPANKQYSQLKNDYEMTFTGETMVQLCDDADDGGIPEIKFDL 285
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTLWG 387
IS++ S EN + VD IGI V R E ++R L L D S ++ LTLWG
Sbjct: 286 VPISQVASMENKAAVDTIGICKDVGEVQTFTSRTTNKEFKKRELTLVDMSNAAINLTLWG 345
Query: 388 DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFS-GKSIGTIPSTQLFINPDFAEAHELRE 446
D +Q PV+ VK ++N+F+ GKS+ + L INPD EAH+LR
Sbjct: 346 DEAVNFDGHVQ--------PVILVKGSRINEFNGGKSLSMGGGSILKINPDIPEAHKLRG 397
Query: 447 WFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSD 506
WFD+GG + + +S GG+ + T+ + LG +KPD+ +A + +K +
Sbjct: 398 WFDNGGGDNISNLVSAR-TGGGSFSTDWVTLKDARIRNLGSGDKPDYFQCKAVVHIVKQE 456
Query: 507 SFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVT 565
+ Y +CP +CNKKV GN +++C+RCN YR L+ I D T WVT
Sbjct: 457 NAFYKSCP----QTECNKKVVDEGNGQYRCERCNAAYPNFKYRLLINMSIGDWTSNRWVT 512
Query: 566 AFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRV-FNQYLFRLKIKEELYGDEQRV 624
F E+GE++L A+E + L++D E + + F+ ++F+L+ K E+YGD R
Sbjct: 513 CFNEAGEQLLKHTAQE---VGEALENDPTSAEKMFGDINFSSFIFKLRCKNEMYGDMTRN 569
Query: 625 KITVIRADQVNYSSESRYLL 644
K+TV +NY +++L+
Sbjct: 570 KLTVQSMTPINYKEYNKHLI 589
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 12 LINGGDVNSKPLVQVMDIKLIG--STQERYRFLISDS-VSTQHAMLATQLNDRVKTGQVK 68
+++G DV +P++Q++ IK I S QERYR L+SD +AMLA+QLN+ G +
Sbjct: 7 IMHGEDV-PQPVLQILGIKRINTNSDQERYRLLMSDGKYYNSYAMLASQLNEMQHKGLLT 65
Query: 69 KGSVVQLIDYICSTV----QNRKIIVVLNMETI 97
+ ++V+L Y+ S V +++++V + +
Sbjct: 66 ENTIVRLDKYMTSMVGKEGSGKRVLIVTELTVL 98
>gi|119480455|ref|XP_001260256.1| replication factor A 1, rfa1 [Neosartorya fischeri NRRL 181]
gi|119408410|gb|EAW18359.1| replication factor A 1, rfa1 [Neosartorya fischeri NRRL 181]
Length = 603
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 196/639 (30%), Positives = 328/639 (51%), Gaps = 80/639 (12%)
Query: 21 KPLVQVMDIKLIG---STQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLID 77
+P+VQ + IK + + QERYR + SD + MLATQ N V +G +KKG V+L
Sbjct: 27 EPIVQCVQIKPLPPQPNHQERYRAVFSDISNYVQTMLATQANPLVTSGMLKKGCFVRLKS 86
Query: 78 YICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNY 135
+ ++V+ +KI+++L++E + + + E IG PK + + + PQP ++
Sbjct: 87 FQANSVKGKKILIILDLEVLQELGEAEKIGEPKPL-------ENKLEEDERPQPTTISG- 138
Query: 136 SAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRN 195
G F R +P VQP
Sbjct: 139 ---------------------GGFYGSKVQNQRG----------EPRVQPARSS------ 161
Query: 196 HGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDG 255
A I PI A++PY +W IKAR T+K ++ ++N +G++FS +LLD D
Sbjct: 162 -----LTSTHATIYPIEAISPYSHKWTIKARCTSKSAIKTWHNRNSEGRLFSVNLLD-DS 215
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVDLC 314
GEIR T FN D Y++ G VY IS ++ A+K F +L N++E+ E + V+
Sbjct: 216 GEIRATGFNEQCDLLYDVFHEGSVYYISSPCRVQIAKKQFTNLNNDYELTFEKDTVVEKA 275
Query: 315 TEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILNL 373
++ D +P+ +F+F + +++S E ++ +D+IG++ V + I+ K + +R L L
Sbjct: 276 EDQSD-VPQVRFNFTTVGDLQSVEKDTTIDIIGVLKDVGETTQIVSKTTSKPYDKRELTL 334
Query: 374 KDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFP--VLSVKSGKVNDFSGKSIGTIPSTQ 431
D+SG SV LT+WG ++ P V++ K KV+DF G+S+ + S
Sbjct: 335 VDSSGFSVRLTIWGS----------TALNFNATPESVIAFKGVKVSDFGGRSLSLLSSGS 384
Query: 432 LFINPDFAEAHELREWFDSGGKNAA-TVSISREIAAGGAKNEIH-KTVSQIKNEGLGRSE 489
+ ++PD EAH L+ W+D+ G++ T + A+ A H KT++QI+ E LG SE
Sbjct: 385 MTVDPDIEEAHRLKGWYDAQGRHETFTSHATMSNASSSAMRLDHLKTIAQIREEQLGMSE 444
Query: 490 KPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYR 548
+ +++ + +IK D+ CY AC L G CNKKVT+ +W+C+ C++ +YR
Sbjct: 445 DAVYFSLKGTVIYIKQDNMCYPAC-LSEG---CNKKVTELDPGQWRCESCDKTHPRPEYR 500
Query: 549 YLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYL 608
Y++ + D TG W++ F E G++++G A +L L+ + G+I + +
Sbjct: 501 YIMLINVSDHTGQLWLSCFDEVGKQLMGTSADQLMDLRQNGEKAA--GDIFQEANCRTWN 558
Query: 609 FRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
FR + K + +GD+QR++ V A VNYS E+ L+ LI
Sbjct: 559 FRCRAKLDHFGDQQRIRYQVSTAKPVNYSEEASRLMALI 597
>gi|451853197|gb|EMD66491.1| hypothetical protein COCSADRAFT_138126 [Cochliobolus sativus
ND90Pr]
Length = 611
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 193/644 (29%), Positives = 328/644 (50%), Gaps = 84/644 (13%)
Query: 22 PLVQVMDIKLI------GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQL 75
P++Q + IK + + +R+R ++SD + M+AT N+ V +GQ+KKGS+V+L
Sbjct: 25 PVLQCVQIKTMEPKAGEANPVQRFRVVLSDIRNFIQTMIATTANEIVTSGQLKKGSIVRL 84
Query: 76 IDYICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQ-KTIPSNNLPQPVRV 132
+ Y V+++ I++++ +E + + + IG P+ AQ IP NN
Sbjct: 85 LKYNPQRVKDKNILIIMELEVLSQYGELDKIGQPEALDTKPADAQPAAIPGNNF------ 138
Query: 133 NNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPN 192
Y + + Q S + NPG+ S P+
Sbjct: 139 --YGSKPAPAPQPQRSLPTHQSNPGTSSHPH----------------------------- 167
Query: 193 FRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLD 252
+ PI +L+PY +W I+AR T K D++ ++N +G GK+FS +LLD
Sbjct: 168 ---------------LYPIESLSPYAHKWTIRARCTHKSDMKEWHNQKGTGKLFSVNLLD 212
Query: 253 SDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTV 311
D GEIR T F V D+ + + E G VY IS + A+KNF++L N++E+ E + V
Sbjct: 213 -DTGEIRATAFTEVADKLFPVFEEGVVYYISAPCRVTLAKKNFSNLPNDYELQFERDTEV 271
Query: 312 DLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRI 370
+ E+ D+ P+ +F+F I ++ S E ++ +D IG++ V I KN + +R
Sbjct: 272 EKA-EDQDNKPQIRFNFTKIGDLTSVEKDTTIDTIGVLKEVAEVTTITSKNTNKDFSKRE 330
Query: 371 LNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPST 430
L L D S SV LT+WG K E DV +++ K KV+DF G+S+ + S
Sbjct: 331 LTLADDSQTSVRLTIWG--------KTAESFDVPLESIVAFKGVKVSDFGGRSLSLLSSG 382
Query: 431 QLFINPDFAEAHELREWFDSGGKNAATVSISREIAA--GGAKNEIHKTVSQIKNEGLGRS 488
+ ++PD EAH+LR WF++ G+ +AT S + + + GG+KN+ K +S I E
Sbjct: 383 SMMVDPDIDEAHKLRGWFNAVGQ-SATFSTHQNMVSTTGGSKNDA-KPISAIIEEEAYLQ 440
Query: 489 EKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSG-NRWQCDRCNQEIDECDY 547
+ P ++++RA + ++K +F Y AC + CNKKV + W C++C E +Y
Sbjct: 441 DTPSYMSLRASVLYVKDSTFAYPAC----STQGCNKKVIEENPGSWWCEKCQATFPEPNY 496
Query: 548 RYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDD--VRFGEIIRSRVFN 605
RY+L A + D TG W++ F E+G+ I+G A E +K + +++ F +++
Sbjct: 497 RYVLSANVGDHTGTLWLSCFDEAGQTIVGMSANEAMKMKMDDEENGTRNFVNVMQEATCK 556
Query: 606 QYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+ FR++ K E Y D+ + + V+ +N++ E+ L LI +
Sbjct: 557 TFNFRVRAKMETYQDQPKPRYQVMNIYPLNFAQEANKLAQLIKQ 600
>gi|408398028|gb|EKJ77164.1| hypothetical protein FPSE_02614 [Fusarium pseudograminearum CS3096]
Length = 607
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 191/636 (30%), Positives = 327/636 (51%), Gaps = 71/636 (11%)
Query: 22 PLVQVMDIKLIGSTQE---RYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
P++Q + +K + + + R+R ++SD MLATQ N V ++ +G ++ Y
Sbjct: 29 PVLQCLQVKQMAPSAQGGDRFRLVMSDGQHYVQTMLATQANHVVHDNKLVRGCFARIKQY 88
Query: 79 ICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAP 138
+ ++ + I+V+L++E I E +G + E PS
Sbjct: 89 TPNNLKGKNILVILDIEVI----ESLGIQEKIGE---------PS--------------- 120
Query: 139 NSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGP 198
F+ + +G ++ G F G + + + + P +P +
Sbjct: 121 ---AFDAKPAGQESAIAGGDFY----GAKKEESKTQPQQFQEQQQSMPSRPAMH------ 167
Query: 199 ILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEI 258
A + I PI L+P+ +W IKARVTAK D++ ++ A G+GK+FS +LLD + GEI
Sbjct: 168 -----AGSNIYPIEGLSPFAHKWTIKARVTAKSDIKTWHKATGEGKLFSVNLLD-ESGEI 221
Query: 259 RVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEE 317
+ T FN D Y+ ++ G VY IS ++ A+K F++L N++E+ E + V+ E+
Sbjct: 222 KATGFNDQCDALYDQLQEGSVYYISTPCRVQLAKKQFSNLPNDYELTFERDTVVEK-AED 280
Query: 318 DDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDT 376
++P+ +F+F I E++S E ++ VDVIG++ V I +K+G Q+R L L D
Sbjct: 281 QTNVPQVRFNFCSIQELQSVEKDNTVDVIGVLKEVGEIGDITSKKDGRPFQKRELTLVDD 340
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP 436
+G SV +T+WG N D V++ K KV+DF GKS+ + S + ++P
Sbjct: 341 TGFSVRVTIWGKNANS--------FDAAPESVVAFKGTKVSDFGGKSLSLLSSGTMTVDP 392
Query: 437 DFAEAHELREWFDSGGKNAATVSISREIAAGGA--KNEIHKTVSQIKNEGLGRSEKPDWV 494
D +AH L+ W+DS G+ + + G A + E KT++Q+K+E LG ++ +
Sbjct: 393 DIPDAHRLKGWYDSAGRTDTFATHQNMASVGSATGRKEDLKTIAQVKDENLGMDDQA-YY 451
Query: 495 TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQA 553
T++A I F+K ++FCY AC L G CNKKVTQ + WQC++CN ++ +YRY+L
Sbjct: 452 TIKATIVFVKQENFCYAAC-LSQG---CNKKVTQMPDGTWQCEKCNLSHEKPEYRYILSL 507
Query: 554 QIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKI 613
+ D T W+T F + G +++G A E+ LK DD + ++ FR +
Sbjct: 508 NVADHTSHQWLTGFDDFGRQVMGRTADEMMELKE--NDDTKLTAAFEEANCKKFTFRCRA 565
Query: 614 KEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
K + +G+ QR++ V+ +++ SE L +LI +
Sbjct: 566 KMDNFGEAQRIRYQVMSVTPLDFKSEGTKLDELIKQ 601
>gi|358395596|gb|EHK44983.1| hypothetical protein TRIATDRAFT_139326 [Trichoderma atroviride IMI
206040]
Length = 600
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 170/468 (36%), Positives = 265/468 (56%), Gaps = 27/468 (5%)
Query: 191 PNFRNHGPI---LKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFS 247
P + H P A A I PI AL+P+ +W IKARVT K D++ ++ G+GK+FS
Sbjct: 148 PQMQQHQPAPSRSATHAGANIYPIEALSPFSHKWTIKARVTFKSDIKTWHKPTGEGKLFS 207
Query: 248 FDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLE 306
+LLD + GEI+ T FN D FY++++ G VY IS + A+K F++L N++E+ E
Sbjct: 208 VNLLD-ESGEIKATGFNDQCDAFYDLLQEGSVYYISTPCRVALAKKQFSNLSNDYELTFE 266
Query: 307 ATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGME 365
+ ++ E+ ++P+ +F+F I E++S E +S VDVIG++ V I +K+G
Sbjct: 267 RETVIEK-AEDQTNVPQLRFNFCSIQELQSVEKDSTVDVIGVLKEVAEVSEITSKKDGRP 325
Query: 366 TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIG 425
Q+R L L D +G SV +T+WG N D V++ K KV+DF GKS+
Sbjct: 326 FQKRELTLVDDTGYSVRVTIWGKTANG--------FDANPESVVAFKGTKVSDFGGKSLS 377
Query: 426 TIPSTQLFINPDFAEAHELREWFDSGGKN---AATVSISREIAAGGAKNEIHKTVSQIKN 482
+ S + +NPD +A+ L+ W+DS G+ A +++ A G K++I KT+SQ+K+
Sbjct: 378 LLSSGTMTVNPDIPDAYRLKGWYDSAGRTDTFATHQNLAGVAGATGRKDDI-KTISQVKD 436
Query: 483 EGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQE 541
E LG ++ + T++A I F+K DSFCY AC + CNKKVT + W C++CN
Sbjct: 437 ENLGVDDQA-YYTIKATIVFVKQDSFCYPACST----QGCNKKVTSMPDGTWHCEKCNVS 491
Query: 542 IDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRS 601
D DYRY+L + D T W++ F ++G I+G A EL LK DD +F +
Sbjct: 492 HDRPDYRYILNLNVADHTSHQWLSCFDDTGRIIVGMSANELMELKE--NDDAKFMAAFEA 549
Query: 602 RVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+ FR + K + +GD QRV+ V+ A ++Y +E L++LI +
Sbjct: 550 VNCKKLTFRCRAKLDHFGDTQRVRYQVLSAALMDYKTEGDKLVELIKQ 597
>gi|219123923|ref|XP_002182265.1| replication protein a large 70 kD subunit [Phaeodactylum
tricornutum CCAP 1055/1]
gi|217406226|gb|EEC46166.1| replication protein a large 70 kD subunit [Phaeodactylum
tricornutum CCAP 1055/1]
Length = 606
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 199/655 (30%), Positives = 330/655 (50%), Gaps = 72/655 (10%)
Query: 14 NGGDVNSKPLVQVMDIKLIGSTQE--RYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGS 71
NGG + P++QV+D K + Q RYR ++SD MLATQLN + T + +
Sbjct: 4 NGGGPSFSPILQVLDTKQVPGPQGSVRYRIVLSDGKHYIQGMLATQLNHMIATNLIGANT 63
Query: 72 VVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVR 131
+VQ+ ++ + V++R +I++LN+ + + IG+P+ ++++ T
Sbjct: 64 IVQVEQFMSNRVKDRTVIILLNVHALRNEPSRIGDPQDIEKAQIATPGT----------- 112
Query: 132 VNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPN--SGTFRAPNAGSIVRSFQPTVQPPYQP 189
N T +S P +PN G R P+ S VRS
Sbjct: 113 ---------------NYATGSSVPPVKTGSPNPYGGPSRNPHHASPVRS----------- 146
Query: 190 PPNFRNHGPILKNEAPAR-IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSF 248
+H PI+++ I I+ LN Y +W I+ARVT+K D+R ++NA+G+G +FS
Sbjct: 147 -----SHAPIVRDTVNGTPITNISNLNMYANKWTIQARVTSKSDIRTWSNAKGEGSLFSV 201
Query: 249 DLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEAT 308
+LLD ++R T F VD+FY +++G VY S G LK A +N ++ +EI +
Sbjct: 202 ELLDQTQ-DVRATFFKEAVDKFYSFLQIGSVYTFSGGRLKVANAQYNTCQSNFEITFDQN 260
Query: 309 STVDLCTEEDDSIPKQQFSF-RHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMET 366
S + L +D +I +Q + F I+ +E E N++VD++ +V +V I+ +K+G E
Sbjct: 261 SEIHLA-NDDGNIQRQHYEFIDSIAGLERTEPNTMVDLLAVVQAVGEVATIVSKKSGQEL 319
Query: 367 QRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGT 426
+ L L DTS + LTLWGD + + D PV++++ +V+D+ G+S+
Sbjct: 320 TKCDLTLIDTSATQITLTLWGD------KAASALTDYNQQPVVAIRRARVSDYGGRSLSL 373
Query: 427 IPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGA----KNEIHKTVSQIKN 482
S + NPD + L+ W+ + N S GGA E +T++ IKN
Sbjct: 374 --SGSIETNPDIPQTAPLQTWWRTQTANGGVTGKSLSATRGGAGVMESLEQRQTIADIKN 431
Query: 483 EGLGRS-EKPDWVTVRAFITFIKSD---SFCYTACPLMIGDRQCNKKVTQS--GNRWQCD 536
LG + +KPDW+T +A ++F+K D Y AC + KVTQ+ GN W CD
Sbjct: 432 NNLGYAGDKPDWLTFKATVSFLKKDKEGGSWYPACANAGEPCKNRYKVTQTTDGN-WYCD 490
Query: 537 RCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEIL-GCPAKELYMLKYELQDDVRF 595
+C C R++ ++D T TWV+ F E E +L G A ++Y Y+ Q D
Sbjct: 491 KCQGSFPTCVRRWIFSGVVEDDTSSTWVSFFNEQAETLLAGATADQVYAETYQDQQDQDA 550
Query: 596 GEIIRSRV-FNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+ ++ +++F+ K+K E+ +E RVK +V+ V+++ ESR LL ++K
Sbjct: 551 YDSYFAKANHTEWIFKCKVKNEMVNEESRVKTSVVAMQPVDFAKESRDLLSALAK 605
>gi|330930966|ref|XP_003303215.1| hypothetical protein PTT_15345 [Pyrenophora teres f. teres 0-1]
gi|311320921|gb|EFQ88698.1| hypothetical protein PTT_15345 [Pyrenophora teres f. teres 0-1]
Length = 587
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 199/645 (30%), Positives = 319/645 (49%), Gaps = 110/645 (17%)
Query: 22 PLVQVMDIKLI-------GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQ 74
P++Q + IK + G+ Q R+R ++SD + M+AT ND V +GQ+KKGS+V+
Sbjct: 25 PVMQCVQIKPMDPKVGDSGAIQ-RFRVVLSDVRNFIQTMIATSANDIVMSGQLKKGSIVR 83
Query: 75 LIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNN 134
L+ Y V+ + I++++++E P + NN
Sbjct: 84 LLKYNPQRVKEKNILIIMDLE-------------------------------PAAISGNN 112
Query: 135 Y--SAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPN 192
+ S P Q S + NPG+ S PN
Sbjct: 113 FYGSKPAPAPAQAQRSLPTHQSNPGTASHPN----------------------------- 143
Query: 193 FRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLD 252
+ PI +L+PY +W I+AR TAK D++ + NA+G GK+FS +LLD
Sbjct: 144 ---------------LYPIESLSPYAHKWTIRARCTAKSDMKEWTNAKGAGKLFSVNLLD 188
Query: 253 SDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTV 311
D GEIR T F V D+ Y I EVG VY IS + A+K F++L N++E+ E + V
Sbjct: 189 -DTGEIRATAFTEVADKLYPIFEVGTVYYISAPCRVTLAKKQFSNLPNDYELQFERDTEV 247
Query: 312 DLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRI 370
+ E+ ++ P+ +F+F I ++ S E ++ +D IG++ V I K + +R
Sbjct: 248 EKA-EDQENKPQIRFNFTKIGDLSSVEKDTTIDTIGVLKEVADVTTITSKTTNKDFSKRE 306
Query: 371 LNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPST 430
L L D S SV LT+WG K E D +++ K KV+DF G+S+ + S
Sbjct: 307 LTLADDSQTSVRLTIWG--------KTAESFDAPLESIIAFKGVKVSDFGGRSLSLLSSG 358
Query: 431 QLFINPDFAEAHELREWFDSGGKNAATVSISREI--AAGGAKNEIHKTVSQIKNEGLGRS 488
+ ++PD +AH LR WFD+ G+N AT S + + AAGG+KN+ K +S I E
Sbjct: 359 SMMVDPDIDDAHRLRGWFDAVGQN-ATFSTHQNMASAAGGSKNDA-KIISVIMEEEAYLQ 416
Query: 489 EKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQS--GNRWQCDRCNQEIDECD 546
+ P ++++RA + ++K+ + Y AC + CNKKV + GN W C++C E
Sbjct: 417 DTPTYMSLRASVLYVKNTTVAYPAC----STQGCNKKVIEDNPGN-WWCEKCQASFPEPQ 471
Query: 547 YRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDD--VRFGEIIRSRVF 604
YRY+L + D TG W++ F E+G EI+G A E LK + +++ F ++
Sbjct: 472 YRYVLSVNVGDHTGTLWLSCFDEAGAEIVGMSANEAMKLKMDDEENGTTNFITAMQEATC 531
Query: 605 NQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+ FR++ K E Y D+ + + V+ ++NY+ E+ L LI +
Sbjct: 532 QTFNFRVRAKMETYQDQPKPRYQVLSLHKLNYAQEANKLAQLIKQ 576
>gi|195444358|ref|XP_002069830.1| GK11360 [Drosophila willistoni]
gi|194165915|gb|EDW80816.1| GK11360 [Drosophila willistoni]
Length = 605
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 168/440 (38%), Positives = 251/440 (57%), Gaps = 23/440 (5%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
PIA+L+PYQ +W IKARVTAK +R ++N RG+GK+FS DL+D + GEIR T F D+
Sbjct: 171 PIASLSPYQNKWVIKARVTAKTAIRTWSNPRGEGKLFSMDLMD-ESGEIRATAFKEQCDK 229
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFR 329
FY++I+V VY SK LKPA K ++ LKN++E+ + V +C +E+DSIP+ ++
Sbjct: 230 FYDLIQVDGVYYFSKCQLKPANKQYSQLKNDYEMTFTGETMVQMCEDEEDSIPEIKYDLV 289
Query: 330 HISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTLWGD 388
IS++ + EN + VD IGI V R E ++R L L D S ++ LTLWGD
Sbjct: 290 PISQVSNMENKAAVDTIGICKEVGELQTFTSRTTNKEFKKRDLTLVDMSNSAISLTLWGD 349
Query: 389 FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF-INPDFAEAHELREW 447
+Q PV+ VK ++N+F+G ++ + INPD EAH+LR W
Sbjct: 350 DAVNFDGHVQ--------PVILVKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRGW 401
Query: 448 FDS-GGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSD 506
FD+ GG N A + +R GG + T+ + LG +KPD+ +A + +K +
Sbjct: 402 FDNGGGDNIANMVSAR--TGGGTFSADWLTLKDARERNLGSGDKPDYFQCKAVVHIVKQE 459
Query: 507 SFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVT 565
+ Y ACP +CNKKV GN R++C+RCNQ+ YR L+ I D T WVT
Sbjct: 460 NAFYKACP----QAECNKKVVDEGNDRYRCERCNQDFPNFKYRLLINLSIGDWTSNRWVT 515
Query: 566 AFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRV-FNQYLFRLKIKEELYGDEQRV 624
F E GE++L A+E + L++D E + S + F+ ++F+L+ K E+YGD R
Sbjct: 516 CFSEIGEQLLKHTAQE---VGEALENDPPKAEQMFSGMNFSAHIFKLRCKNEVYGDMTRN 572
Query: 625 KITVIRADQVNYSSESRYLL 644
K+TV +NY +++L+
Sbjct: 573 KLTVQSVSPINYKDYNKHLI 592
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
Query: 3 VNLTPNSISLINGGDVNSKPLVQVMDIKLIGST--QERYRFLISDSVS-TQHAMLATQLN 59
++L+ I I G+ P++Q++ IK I S ERYR LISD + +AMLA+QLN
Sbjct: 1 MSLSTGVIGRIMQGEDVENPVLQILAIKRINSNVESERYRILISDGMYFNSYAMLASQLN 60
Query: 60 DRVKTGQVKKGSVVQLIDYICSTVQ----NRKIIVVLNMETIILDCE---PIGNPKIFSE 112
+ G +++ ++V+L Y+ S V ++++++ + + E IG P +
Sbjct: 61 HLHQAGDLEEFTIVRLDKYMTSLVGKEGVGKRVLIINELSVLKSGSEQKSKIGEPVTYEN 120
Query: 113 SELTAQKTIPS 123
++ T PS
Sbjct: 121 AKKTPAPAAPS 131
>gi|50302901|ref|XP_451388.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640519|emb|CAH02976.1| KLLA0A08844p [Kluyveromyces lactis]
Length = 621
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/476 (33%), Positives = 265/476 (55%), Gaps = 24/476 (5%)
Query: 181 PTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAR 240
P QP P N +N P I I ++PYQ W IKARV+ KGDL+++ N R
Sbjct: 165 PAPQPRSVPKAKSNNGSS--QNSRP--IFAIEQISPYQNNWTIKARVSFKGDLKKWQNNR 220
Query: 241 GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNE 300
G+G + + +LLDS GEIR T FN +F EI++ G+ Y +SK ++PA+ F++LK+
Sbjct: 221 GEGHILNVNLLDS-SGEIRATAFNDNAIKFNEILQEGKAYFVSKARVQPAKPQFSNLKHP 279
Query: 301 WEIFLEATSTVDLCTEED-DSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPIL 359
+E+ LE V+ C ED + +P+ F+F ++++ + E N+ +DV+GI+ SV P +
Sbjct: 280 YELSLERDCVVEECMNEDANDVPEMHFNFIKLNDVNNVEKNTAIDVVGILKSVGPHFELA 339
Query: 360 RKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDF 419
K+G + RR + + D SG + L LWG+ Q ++ + G V+++K +V DF
Sbjct: 340 AKSGKKFDRRDVEIVDDSGACISLGLWGE------QAIKFNLPEG--SVVALKGVRVTDF 391
Query: 420 SGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEI---HKT 476
+GKS+ ++ LF NPD EA+ L+ W+D+ N ++ E G ++ T
Sbjct: 392 NGKSLSMGNTSSLFANPDIQEAYTLKGWYDANASNTTFKALKTESGGGADTSKFIADRTT 451
Query: 477 VSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKV-TQSGNRWQC 535
+++ LGRSEK D+ +V+A ++F+K D+F Y AC + C KKV QS W+C
Sbjct: 452 IARAIESNLGRSEKGDYFSVKAAVSFLKVDNFAYPACL----NEGCQKKVIMQSDGTWRC 507
Query: 536 DRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRF 595
++C+ YRY+L I DQTG W+T F + E+++G A EL LK ++ F
Sbjct: 508 EKCDMNHPHPKYRYMLTISIMDQTGQIWLTLFNDQAEQLVGVSANELTELKE--NNNQAF 565
Query: 596 GEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSF 651
+ + N+Y FR++ +E+ Y +E R++ TV + + +E+ +L + K+
Sbjct: 566 VALTQKVQMNEYDFRIRAREDNYNNETRIRYTVANLHDLRWKAEADFLAAELLKAL 621
>gi|116179976|ref|XP_001219837.1| hypothetical protein CHGG_00616 [Chaetomium globosum CBS 148.51]
gi|88184913|gb|EAQ92381.1| hypothetical protein CHGG_00616 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 191/618 (30%), Positives = 318/618 (51%), Gaps = 79/618 (12%)
Query: 22 PLVQVMDIKLIGS------TQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQL 75
P++Q + I + S ERYR ++SD + MLATQ N + GQ+++GS+V++
Sbjct: 28 PVMQCLHITTLESKGPGTAAPERYRIVLSDLRNYVQCMLATQANHVMHDGQLQRGSIVRV 87
Query: 76 IDYICSTVQNRKIIVVLNMETIILDCEP--IGNPKIFSESELTAQKTIPSNNLPQPVRVN 133
Y ++ + ++++L++E + P IG+PK S + R N
Sbjct: 88 KQYQAQYLKGKHVMIILDLEVMTELGTPDKIGDPK--------------SMEVTTGERQN 133
Query: 134 NYSAPNSGTFNLQNSGTFNSQN-PGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPY--QPP 190
S +S +F + +Q+ P + +TP FQP Q +
Sbjct: 134 TTS--DSASF-------YGAQSEPAAQTTPQ---------------FQPQAQRQLASRTG 169
Query: 191 PNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDL 250
N GP+ A I PI A++PY +W IKARVT K + + +GK+FS +
Sbjct: 170 GGGGNSGPL-----AATIYPIEAVSPYVNKWTIKARVTTKSYIGTWKRPTSEGKLFSVNF 224
Query: 251 LDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATS 309
LD + GEIR T FN VD+FY++++ G VY IS ++ A+K F+++ N++EI + +
Sbjct: 225 LD-ESGEIRATAFNTEVDQFYDLLQEGSVYYISTPCKVQMAKKQFSNVANDYEIMFQHDT 283
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQR 368
++ E+ S+P+ +F+F I E++ E ++ +DVIG++ V I K + +
Sbjct: 284 VIEK-AEDQSSVPQVRFNFCTIQELQEVEKDATIDVIGVLKDVGKQEEIQSKTTQKGYDK 342
Query: 369 RILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIP 428
R L L D +G SV +T+WG K D V++ K +V+DF G+S+ +
Sbjct: 343 RELTLVDDTGYSVRVTIWG--------KAAAEFDASLESVVAFKGMRVSDFGGRSLSLLS 394
Query: 429 STQLFINPDFAEAHELREWFDSGGKNAATVSISREI----AAGGAKNEIHKTVSQIKNEG 484
S + I+PD EAH+L+ W+D+ G+ T + + AA G K+E+ K ++QIK+E
Sbjct: 395 SGTMAIDPDIPEAHKLKGWYDAQGRGNTTFATHSHLSSIGAAAGQKDEM-KMIAQIKSEN 453
Query: 485 LGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQS-GNRWQCDRCNQEID 543
+G E + T++ I ++ ++F Y AC C+KKVT S ++W+C+RCN D
Sbjct: 454 IGM-EDTAYFTIKGTIVHLRQENFAYPACI----SENCSKKVTPSMDDKWRCERCNITHD 508
Query: 544 ECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRV 603
YRY++ A + D TG TWV+ F +S I+G A E+ LK ++D E +
Sbjct: 509 RAQYRYIMSADVSDHTGHTWVSCFDDSARIIMGKSADEMMELKN--REDGSCAEAFEAAN 566
Query: 604 FNQYLFRLKIKEELYGDE 621
+ +FR + K + YGD+
Sbjct: 567 CRKMVFRCRAKMDTYGDQ 584
>gi|444321919|ref|XP_004181615.1| hypothetical protein TBLA_0G01500 [Tetrapisispora blattae CBS 6284]
gi|387514660|emb|CCH62096.1| hypothetical protein TBLA_0G01500 [Tetrapisispora blattae CBS 6284]
Length = 629
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 156/456 (34%), Positives = 262/456 (57%), Gaps = 31/456 (6%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I I L+PYQ W IKARV+ KGD++ ++N RG+GK+ +F+LLD+ GEIR TCFN +V
Sbjct: 191 IFAIEQLSPYQNVWTIKARVSFKGDVKTWHNQRGEGKLLNFNLLDT-SGEIRATCFNQLV 249
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE-EDDSIPKQQF 326
D++ E I+ G+VY ISK L+P++ F++L + +E+ +E + ++ C + + +PK F
Sbjct: 250 DKYNETIQEGKVYFISKARLQPSKPKFSNLSHPYELSIENDTIIEECNDVSTNDVPKTNF 309
Query: 327 SFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLW 386
+F + I++ E NS +DV+G + +VNP + + G + RR + + D +G +++ LW
Sbjct: 310 NFTKLDSIQNLETNSTIDVLGAIKTVNPHFELTSRAGKKFDRRDIEIVDETGFIIKVGLW 369
Query: 387 G----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAH 442
DF EG ++++K +V DF GKS+ S+ L NPD +EA+
Sbjct: 370 NQQAIDFNVPEGS------------IVAIKGVRVTDFGGKSLSMGFSSTLTANPDISEAY 417
Query: 443 ELREWFDSGGKNAATVSISRE----IAAGGAKNEIHK--TVSQIKNEGLGRSEKPDWVTV 496
L+ W+D+ N S + E ++ G K I + T+++ KN+ LGRSEK D+ +V
Sbjct: 418 SLKGWYDANRNNTTFTSYNSESGGPVSGEGLKKIISQRITIAKAKNDNLGRSEKGDFFSV 477
Query: 497 RAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQI 555
+A ++F+K D+F Y AC CNKKV Q+ W+C++C+ +RY+L I
Sbjct: 478 KAAVSFLKVDNFAYPAC----STEGCNKKVIEQTDGTWRCEKCDVSFPSPKWRYMLTISI 533
Query: 556 QDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKE 615
D+T W+T F E ++++G A L ++ + + F +I + FR++ +E
Sbjct: 534 MDETDQIWLTLFNEQAQQLIGLDASSL--METKENNPEEFNKITQQIQMKTLDFRIRARE 591
Query: 616 ELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSF 651
+ Y D+ R++ TV ++ Y SE+ YL + +SKS
Sbjct: 592 DNYNDQTRIRYTVSNIHELKYKSEADYLAEELSKSL 627
>gi|45198511|ref|NP_985540.1| AFL008Wp [Ashbya gossypii ATCC 10895]
gi|44984462|gb|AAS53364.1| AFL008Wp [Ashbya gossypii ATCC 10895]
Length = 694
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 162/454 (35%), Positives = 259/454 (57%), Gaps = 33/454 (7%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I I L+PYQ W IKARV+ KGD++ ++N RG+GK+F+ + LD+ GEIR T FN
Sbjct: 262 IFAIEQLSPYQNMWTIKARVSFKGDIKTWHNQRGEGKLFNVNFLDT-SGEIRATAFNDNA 320
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
+++EI++ G+VY +SK ++PA+ F++LK+ +E+ L+ + V+ C E D +PK FS
Sbjct: 321 LKYFEILQEGKVYYVSKARIQPAKPQFSNLKHPYELQLDRDTVVEECFEAAD-VPKMNFS 379
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
F + +I S E NS VD++G++ +VNP ++ K+G + RR + + D +G SV + LW
Sbjct: 380 FIKLDQISSMEANSNVDILGVIQTVNPPFEMIAKSGKKFNRRDIVIVDETGYSVNVGLWN 439
Query: 388 ----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHE 443
DF EG V++VKS +V DF GKS+ S+ L NPD EA+
Sbjct: 440 EQAVDFNLPEGS------------VIAVKSVRVTDFGGKSLSMGFSSTLHPNPDIPEAYA 487
Query: 444 LREWFDSGGKNAATVSISREIAAGGAKNEIHK-----TVSQIKNEGLGRSEKPDWVTVRA 498
++ W+ S G + S+ E GG +N + T+ + K++ LGRS+K D+ VR
Sbjct: 488 IKGWYSSKGTSTTFHSLKME---GGDRNSMRYVADRITIGKAKDDNLGRSDKGDYFNVRG 544
Query: 499 FITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQD 557
+ F+K D+F Y AC C KKV Q+ W+C++C + +RY+L A I D
Sbjct: 545 AVNFLKVDNFAYPAC----STEGCQKKVIEQTDGTWRCEKCQVDHPAPKWRYMLTASILD 600
Query: 558 QTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEEL 617
+T W+T F + E++L A L LK D +F ++ +S N+Y FR++ +E+
Sbjct: 601 ETSQIWITLFNDQAEKLLSMDANTLTELKN--TDPEKFQKVTQSVQMNEYDFRVRAREDT 658
Query: 618 YGDEQRVKITVIRADQVNYSSESRYLLDLISKSF 651
Y +E R++ TV + + E+ YL ++K+F
Sbjct: 659 YNEETRIRYTVTNLYPLRWKVEADYLAGELTKAF 692
>gi|374108769|gb|AEY97675.1| FAFL008Wp [Ashbya gossypii FDAG1]
Length = 694
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 162/454 (35%), Positives = 259/454 (57%), Gaps = 33/454 (7%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I I L+PYQ W IKARV+ KGD++ ++N RG+GK+F+ + LD+ GEIR T FN
Sbjct: 262 IFAIEQLSPYQNMWTIKARVSFKGDIKTWHNQRGEGKLFNVNFLDT-SGEIRATAFNDNA 320
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
+++EI++ G+VY +SK ++PA+ F++LK+ +E+ L+ + V+ C E D +PK FS
Sbjct: 321 LKYFEILQEGKVYYVSKARIQPAKPQFSNLKHPYELQLDRDTVVEECFEAAD-VPKMNFS 379
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
F + +I S E NS VD++G++ +VNP ++ K+G + RR + + D +G SV + LW
Sbjct: 380 FIKLDQISSMEANSNVDILGVIQTVNPPFEMIAKSGKKFNRRDIVIVDETGYSVNVGLWN 439
Query: 388 ----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHE 443
DF EG V++VKS +V DF GKS+ S+ L NPD EA+
Sbjct: 440 EQAVDFNLPEGS------------VIAVKSVRVTDFGGKSLSMGFSSTLHPNPDIPEAYA 487
Query: 444 LREWFDSGGKNAATVSISREIAAGGAKNEIHK-----TVSQIKNEGLGRSEKPDWVTVRA 498
++ W+ S G + S+ E GG +N + T+ + K++ LGRS+K D+ VR
Sbjct: 488 IKGWYSSKGTSTTFHSLKME---GGDRNSMRYVADRITIGKAKDDNLGRSDKGDYFNVRG 544
Query: 499 FITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQD 557
+ F+K D+F Y AC C KKV Q+ W+C++C + +RY+L A I D
Sbjct: 545 AVNFLKVDNFAYPAC----STEGCQKKVIEQTDGTWRCEKCQVDHPAPKWRYMLTASILD 600
Query: 558 QTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEEL 617
+T W+T F + E++L A L LK D +F ++ +S N+Y FR++ +E+
Sbjct: 601 ETSQIWITLFNDQAEKLLSMDANTLTELKN--TDPEKFQKVTQSVQMNEYDFRVRAREDT 658
Query: 618 YGDEQRVKITVIRADQVNYSSESRYLLDLISKSF 651
Y +E R++ TV + + E+ YL ++K+F
Sbjct: 659 YNEETRIRYTVTNLYPLRWKVEADYLAGELTKAF 692
>gi|410075269|ref|XP_003955217.1| hypothetical protein KAFR_0A06470 [Kazachstania africana CBS 2517]
gi|372461799|emb|CCF56082.1| hypothetical protein KAFR_0A06470 [Kazachstania africana CBS 2517]
Length = 618
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 160/458 (34%), Positives = 266/458 (58%), Gaps = 34/458 (7%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I I L+PYQ W IKARV+ KG+++ +NN +G GK+F+ + LD+ GEIR T FN
Sbjct: 179 IFAIEQLSPYQNIWTIKARVSYKGEIKEWNNQKGSGKLFNANFLDT-SGEIRATAFNEWA 237
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
++ EI++ G+VY ISK L+PA+ F++L + +E+ L+ + ++ C +E + +PK F+
Sbjct: 238 VKYSEILQEGKVYYISKARLQPAKPQFSNLSHPYELSLDRDTQIEECFDESN-VPKTHFN 296
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
F ++ I++ ENNS +DVIGI+ +V P + + G + RR + L D S S+ + LW
Sbjct: 297 FIKLNSIQNQENNSTIDVIGIIQTVGPHFELTSRAGKKFDRRDITLVDDSNYSIPVGLWN 356
Query: 388 ----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHE 443
DF EG V+++K +V+DF GK++ ++ L +PD EA+
Sbjct: 357 QQAIDFNLPEGS------------VVAIKGVRVSDFGGKTLSMGFTSTLVPSPDINEAYS 404
Query: 444 LREWFDSGGKNAATVSISREI----AAGGAKNEI-----HKTVSQIKNEGLGRSEKPDWV 494
L+ W+DS G+N+ S+ +E + G +N T+++ + + LGRSE+ D+
Sbjct: 405 LKGWYDSVGQNSNFTSLKQEADGSSSVNGGENATKFISQRITIARAQEDNLGRSERGDFF 464
Query: 495 TVRAFITFIKSDSFCYTACPLMIGDRQCNKKV-TQSGNRWQCDRCNQEIDECDYRYLLQA 553
+V+A ++F+K D+F Y AC + CNKKV QS W+C++C+ +RY+L
Sbjct: 465 SVKAAVSFLKVDNFAYPAC----SNEGCNKKVLEQSDGTWRCEKCDINNPSPRWRYVLTI 520
Query: 554 QIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKI 613
I D+T W+T F + E++LG A +L LK D +F ++ ++ NQY FR++
Sbjct: 521 SIMDETNQLWLTLFDDQAEQLLGTSANKLMELKE--TDPNQFTKVTQAIQMNQYDFRIRA 578
Query: 614 KEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSF 651
+E+ Y D+ R++ TV ++N +E+ YL D +SKS
Sbjct: 579 REDNYNDQTRIRYTVAFLHKINQKAEADYLADYLSKSL 616
>gi|358367561|dbj|GAA84179.1| replication factor A 1, Rfa1 [Aspergillus kawachii IFO 4308]
Length = 606
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 192/638 (30%), Positives = 337/638 (52%), Gaps = 75/638 (11%)
Query: 21 KPLVQVMDIKLIGSTQ---ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLID 77
+P+VQ + IK + S Q ERYR + SD + MLATQLN V + ++KG V+L
Sbjct: 27 EPIVQCVQIKQLPSQQSHPERYRAVFSDISNYVQTMLATQLNPMVSSELLRKGCFVRLKS 86
Query: 78 YICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNY 135
+ ++V+ +KI+++L++E + + E IG PK + ++ QP +++
Sbjct: 87 FQANSVKGKKILIILDLEVLEGLGVAEKIGEPKPL-------ESKTDEDDKHQPTTISS- 138
Query: 136 SAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRN 195
+G + S+ G+ N+G V+S +P +
Sbjct: 139 ------------NGFYGSKMSGAQVQSNTG----------VQSARPVLAA---------- 166
Query: 196 HGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDG 255
A A I PI A++PY +W IKAR T+K +++ ++N +G++FS +LLD D
Sbjct: 167 --------AHATIYPIEAISPYSHKWTIKARCTSKTNIKTWHNRNTEGRLFSVNLLD-DS 217
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
GEIR T FN D Y++ + G VY IS ++ A+K F +L N++E+ E + V+
Sbjct: 218 GEIRATGFNDQCDMLYDVFQEGGVYYISNCRVQIAKKQFTNLNNDYELTFERDTVVEKAE 277
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVI-SVNPSVPILRKNGMETQRRILNLK 374
++ D +P+ +F+F I +++S E ++ +DVIG++ + S + +R L +
Sbjct: 278 DQSD-VPQVRFNFTSIGDLQSVEKDTTIDVIGVLKEDMGVSQITSKTTNKPYNKRELVMV 336
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
D +G SV LT+WG Q + + V++ K KV+DF G+S+ + S + +
Sbjct: 337 DNTGFSVRLTIWG----TTAQNFNALPE----SVIAFKGVKVSDFGGRSLSLLSSGSMAV 388
Query: 435 NPDFAEAHELREWFDSGGKNAATVSISREIAAGGA--KNEIHKTVSQIKNEGLGRSEKPD 492
+PD EAH+L+ W+D+ G+ S + + A + K++ KT++QI+ E LG SE+
Sbjct: 389 DPDIEEAHKLKGWYDAQGRAENFSSHASLLGAASSTMKSDQFKTIAQIREEQLGMSEEAV 448
Query: 493 WVTVRAFITFIKSD--SFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYRY 549
+ +++A + +IK D SF Y AC +CNKKVT+ +W+C+RC++ DYRY
Sbjct: 449 YFSLKATVIYIKQDNMSFAYPACL----SEKCNKKVTELDPGQWRCERCDKTHPRPDYRY 504
Query: 550 LLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLF 609
++ + D TG W++ F + G+ ++ A +L ++ D+ G+ + + F
Sbjct: 505 IMHVNVSDHTGQLWLSCFDDVGKSMMDMSANQL--MELFQTDEKAAGDAFQDANCRTWNF 562
Query: 610 RLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
R + K + +G++QR++ V A+ +NYS E+ L DLI
Sbjct: 563 RCRAKIDHFGEQQRIRYQVSSANPINYSQEASRLADLI 600
>gi|320591361|gb|EFX03800.1| replication protein a DNA-binding subunit [Grosmannia clavigera
kw1407]
Length = 631
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 194/647 (29%), Positives = 331/647 (51%), Gaps = 68/647 (10%)
Query: 22 PLVQVMDIKLIG---------STQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSV 72
P++Q + IK +G + ERYR ++SD + MLATQ N V G++ +GS+
Sbjct: 31 PVLQCLQIKPLGPPPNGAAGAAGSERYRVVLSDVDNFVQTMLATQGNHVVHDGKLVRGSI 90
Query: 73 VQLIDYICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPV 130
V++ Y + V+ + I+++L+++ I + + IG P P ++ QPV
Sbjct: 91 VRIKAYQANAVKGKNILIILDLDVIESLGAHDKIGEP-------------TPVDSSIQPV 137
Query: 131 RVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPP 190
+A S N + P + A N G+
Sbjct: 138 -----AAATSTNIGGTNFYGVKKEEPDTKQGIRGSIGAAGNNGNSTGK------------ 180
Query: 191 PNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDL 250
P+ ++G N A I PI L+PY +W IKARVT+K ++R ++ + G+GK+FS +L
Sbjct: 181 PSGTSYGG--SNAAHPNIYPIEGLSPYSHKWTIKARVTSKSEIRTWHKSSGEGKLFSVNL 238
Query: 251 LDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATS 309
LD + GEI+ T FN D++Y++++ G VY IS + A+K F++L N++E+ E +
Sbjct: 239 LD-ESGEIKATGFNEQCDQYYDLLQEGSVYYISSPCRVNIAKKQFSNLPNDYELSFERDT 297
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK-NGMETQR 368
++ E+ S+P+ +++F + ++S E ++++DVIG++ V I K +G ++
Sbjct: 298 QIEKA-EDQSSVPQVRYAFCTLQALQSVEKDAVIDVIGVLRDVGEVSSITSKSSGKPYEK 356
Query: 369 RILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIP 428
R L L D S SV T+WG K D V++ K +V+DF G+S+ +
Sbjct: 357 RELTLVDDSSFSVRTTIWG--------KTAVAFDAKPESVIAFKGVRVSDFGGRSLSLLQ 408
Query: 429 STQLFINPDFAEAHELREWFDSGGK----NAATVSISREIAAGGAKNEIHKTVSQIKNEG 484
S + I+PD EAH L+ W+D+ G+ ++ AG + E KT++Q+++E
Sbjct: 409 SGVMSIDPDITEAHHLKGWYDAAGRSENFSSHNSMGGMGGGAGSGRPEQVKTIAQVRDEN 468
Query: 485 LGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEID 543
+G E + T++A I FIK ++F Y AC C+KKV S + W+C++C+
Sbjct: 469 IGMDETA-YFTLKATIVFIKQETFAYPAC----SSDGCSKKVVSSSDGTWRCEKCDMNHP 523
Query: 544 ECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGC-PAKELYMLKYELQDDVRFGEIIRSR 602
+ YRY + + D TG W+T F + G I+G A EL L+ E DD+ FG
Sbjct: 524 QALYRYTMMLNVNDHTGQLWLTCFDDVGRMIMGGRSADELTELREE--DDIAFGAEFEKA 581
Query: 603 VFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+Y FR++ K + +GD QR++ ++ A +++ SE L +LI +
Sbjct: 582 NCRKYSFRVRAKMDTFGDAQRIRYQIVNAHPLDFKSEGHKLAELIHQ 628
>gi|449015647|dbj|BAM79049.1| probable replication protein A [Cyanidioschyzon merolae strain 10D]
Length = 663
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 206/687 (29%), Positives = 335/687 (48%), Gaps = 103/687 (14%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLI----------GSTQERYRFLISDSVSTQHAML 54
L+ ++ I G + S+P++QV +++ + ++ +RYR ++SD H +L
Sbjct: 6 LSRGAVKSIYGMNTVSRPVLQVQEVRKLQPSVAQQAQATTSGDRYRVVLSDGEHLLHCVL 65
Query: 55 ATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESE 114
QLN V +G + KGS+V+L+DY + VQ+R + +++N+E + + +GNPK F
Sbjct: 66 MAQLNSFVLSGDLDKGSIVRLVDYQPNKVQDRVVAIIINLEILERNAPTVGNPKAFDP-- 123
Query: 115 LTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQ----------------NPGS 158
R + +A +S +F+ ++ T + PG+
Sbjct: 124 ----------------RASTDTALSSHSFDDDSTETARKRQAVSAGVEHKPPPPRVTPGA 167
Query: 159 FSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEA-PARIIPIAALNPY 217
++ AG +VR Q G ++ A P I+A NPY
Sbjct: 168 PPVSVPPPVKSAAAGPVVRFDQ--------------GLGSSVETLAPPGGYTKISAANPY 213
Query: 218 QGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVG 277
Q I+ RV KG+LR Y+NA+G+GK+FSF++ D + G +RVT F ++ IE+
Sbjct: 214 QNNVIIRGRVVQKGELRTYSNAKGEGKLFSFEIAD-ETGNMRVTAFREKALEAHQRIELN 272
Query: 278 RVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESA 337
+Y I+ SLKPA FNH + +E+ L+ S + +D+ I + F F I ++
Sbjct: 273 GIYSIAGASLKPANAQFNHTGHSFEMILDQNSVITQLP-DDNMIQRVSFDFVKIRDLMDV 331
Query: 338 ENNSIVDVIGIVISVNPSVPILRK-NGMETQRRILNLKDTSGRSVELTLWGD-----FCN 391
+VDVIGI + + I K G+ +R + L D +G SV LT+WG+ F N
Sbjct: 332 PVGKVVDVIGIALDIGEVGEISSKTTGLPVAKREVKLIDDTGCSVALTIWGERARSLFSN 391
Query: 392 KEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSG 451
++ + PVL VKS K DF+G S+ T PS+ + +NP+ EA ELR WFDS
Sbjct: 392 EDDR-----------PVLLVKSAKRGDFNGVSLSTTPSSHVEVNPNIREAFELRGWFDSE 440
Query: 452 GKNAATVSISREIAAGGAKNEI------HKTVSQIKNEGLGR----SEKPDWVTVRAFIT 501
G A + GGA+ E KT +Q+++E +G + + TVRA I+
Sbjct: 441 GHGAEFQDLG-GTPLGGARTESRIRNSERKTFAQVQSEHIGEDPHSAPGASYYTVRATIS 499
Query: 502 FIKSDSF---CYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQD 557
IK D Y +CP C KKV +S + ++C+RC++ + RY+ Q D
Sbjct: 500 HIKQDEERPPWYLSCP------DCKKKVIEESPDMYRCERCDKLVKPTP-RYIFSIQAMD 552
Query: 558 QTGLTWVTAFQESGEEILGC-PAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEE 616
TG W+ + E G I G A+EL +K D + I+ F ++LFR++++ +
Sbjct: 553 ATGSHWLNCYDEVGPIIFGGYSAEELKRIKE--TDSEEYQRILEQAHFGEFLFRVRVRSD 610
Query: 617 LYGDEQRVKITVIRADQVNYSSESRYL 643
Y DE + V+ A+++NY SE + L
Sbjct: 611 TYQDEMTFRHMVVGAEKINYESEMKML 637
>gi|367015496|ref|XP_003682247.1| hypothetical protein TDEL_0F02250 [Torulaspora delbrueckii]
gi|359749909|emb|CCE93036.1| hypothetical protein TDEL_0F02250 [Torulaspora delbrueckii]
Length = 616
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/453 (34%), Positives = 260/453 (57%), Gaps = 27/453 (5%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I I L+PYQ W IKARV+ KGD++ ++N +G+GK+F+ + LD+ GEIR T FN +
Sbjct: 180 IFAIEQLSPYQNMWTIKARVSYKGDIKTWHNQKGEGKLFNVNFLDT-SGEIRATAFNEMA 238
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
+F EI++ GRVY ISK L+PA+ F +L + +E+ ++ + V+ C +E + +PK FS
Sbjct: 239 TKFNEILQEGRVYYISKARLQPAKPQFTNLTHPYELSMDRDTVVEECFDESN-VPKTHFS 297
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
F ++ I + E NS VDV+GI+ +VNP + + G + RR +++ D SG S+ + LW
Sbjct: 298 FTKLNAIPNQEANSTVDVLGIIQTVNPQFELTSRAGKKFDRRDIDIVDDSGYSITVGLWN 357
Query: 388 DFCNKEGQKLQEMVDVGFF--PVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELR 445
Q+ VD V++ K +V DF GKS+ ++ + NP+ EA+ L+
Sbjct: 358 ----------QQAVDFNLAEGSVVAFKGIRVTDFGGKSLSMGFTSTMIPNPEVPEAYALK 407
Query: 446 EWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQ------IKNEGLGRSEKPDWVTVRAF 499
W+D G + S+ +E A + + K +SQ +NE LGRSEK D+ +++
Sbjct: 408 GWYDQKGHSENFSSLKQEAGAASSGANLAKFISQRISIATAQNENLGRSEKGDFFSIKGA 467
Query: 500 ITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQ 558
+ F+K D+F Y AC + CNKKV +S W+C++C+ D+RY+L + D+
Sbjct: 468 VNFLKVDNFAYPAC----SNENCNKKVIEESDGTWRCEKCDTNNQAPDWRYMLTLSVLDE 523
Query: 559 TGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELY 618
TG WVT F + +++LG A EL +K D F + I+ NQY FR++ +E+ Y
Sbjct: 524 TGQMWVTVFNDQAKQLLGIGANELMAMKDNDAD--LFTKTIQGIQMNQYDFRIRAREDNY 581
Query: 619 GDEQRVKITVIRADQVNYSSESRYLLDLISKSF 651
++ R++ T+ +N+ +E+ YL + + +F
Sbjct: 582 NNQSRIRYTISNLHLLNFKAEADYLAEELRNAF 614
>gi|307184253|gb|EFN70726.1| Replication protein A 70 kDa DNA-binding subunit [Camponotus
floridanus]
Length = 607
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 172/446 (38%), Positives = 254/446 (56%), Gaps = 23/446 (5%)
Query: 209 IPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
IPIA L+PYQ RW IKARVT K ++ ++N+RG+GK+FS DL+D + GEIR FN D
Sbjct: 170 IPIAILSPYQNRWIIKARVTNKSAIKTWSNSRGEGKLFSMDLID-ESGEIRCVAFNQQCD 228
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
FY +I+VG VY IS+ LK A K F+ LKN++E+ + + + C + D+IP QQF F
Sbjct: 229 NFYHLIDVGNVYYISRCKLKTANKQFSTLKNDYEMTITDDTMISPCHKNCDNIPMQQFDF 288
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTLWG 387
IS++ES E N+++DV+G+V + N I R G E +R +NL D SG + + LWG
Sbjct: 289 CPISQVESKEQNNLIDVLGVVTTFNDIQHITQRTTGKELIKRDINLIDDSGAMICVALWG 348
Query: 388 DFCNKEGQKLQEMVDVGF-FPVLSVKSGKVNDFS-GKSIGTIPSTQLFINPDFAEAHELR 445
KE + GF P+L++K +V +F+ GK++ I S+ L +PD EAH+LR
Sbjct: 349 ----KEAEDFD-----GFNNPILAIKGARVGEFNGGKNLSLINSSVLKKDPDIPEAHKLR 399
Query: 446 EWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGL-GRSEKPDWVTVRAFITFIK 504
+W+ + +SR ++GG N T ++ L G+ D V A I I+
Sbjct: 400 KWYAAANHLENVKFLSR--SSGGDFNTPLYTFREMTEAQLGGKLNFTDLYKVVATINLIR 457
Query: 505 SDSFCYTACPLMIGDRQCNKK-VTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTW 563
++ Y ACP+ C KK + QS ++C++CN++ YR L I D TG W
Sbjct: 458 VENSVYKACPI----DSCRKKLIDQSTGIFRCEKCNKDYPNFVYRLLANMNIADATGNRW 513
Query: 564 VTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQR 623
V AF E E+ILG A+EL LK DD + E + F +++F L++K E++ DE R
Sbjct: 514 VIAFNEVAEKILGISAQELGELKENDNDD--YMEKLNEANFKRFIFSLRVKSEVFQDEMR 571
Query: 624 VKITVIRADQVNYSSESRYLLDLISK 649
+K T +NY + YL+D +SK
Sbjct: 572 IKHTCTSVVPLNYKTHLTYLIDEVSK 597
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 65/116 (56%), Gaps = 13/116 (11%)
Query: 4 NLTPNSIS-LINGGDVNSKPLVQVMDIKLIGS---TQERYRFLISDSVS-TQHAMLATQL 58
NLT ++ ++NG D+ KP++Q++ K I S T +RYR L+SD ML T L
Sbjct: 3 NLTKGALDEIMNGVDI-KKPVLQILGYKKIPSSINTDDRYRLLLSDGDRLNSFTMLVTHL 61
Query: 59 NDRVKTGQVKKGSVVQLIDYICSTVQN----RKIIVVLNMETIILDCE---PIGNP 107
N + + + +V ++++Y ++V N R+I+++L++E + E IGNP
Sbjct: 62 NHLITNNSLTQYTVCKILNYALTSVNNNGKERRIMLILDIEVLFPGNEVGYKIGNP 117
>gi|325095428|gb|EGC48738.1| replication factor A 1 [Ajellomyces capsulatus H88]
Length = 602
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 203/636 (31%), Positives = 328/636 (51%), Gaps = 72/636 (11%)
Query: 20 SKPLVQVMDIKLIG---STQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLI 76
++P+VQ + +K + ++ ER+R + SD + ML TQ N V +GQ+ +G V+L
Sbjct: 25 AEPVVQCVQVKPLPPQPNSPERFRAVFSDITNYVQTMLGTQANHYVTSGQLVRGCFVRLK 84
Query: 77 DYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYS 136
+ + ++ ++I+ II D E + I +K I PQP+
Sbjct: 85 SFQANMIKGKRIL-------IIFDLEVLDRLGI-------CEKKIGD---PQPLDTKQEE 127
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNH 196
+ + ++G + S+ G P R+ A + +
Sbjct: 128 QDKTIPTTISSNGFYGSR--GPQQPPQQPAQRSAAAATAHAN------------------ 167
Query: 197 GPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGG 256
I PI AL+PY +W IKAR T K ++ ++N G+GK+FS +LLD D G
Sbjct: 168 -----------IYPIEALSPYSHKWTIKARCTNKSAIKTWHNKNGEGKLFSVNLLD-DSG 215
Query: 257 EIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
EIR T F D Y + E G VY IS ++ A+K FN+L NE+E+ E + V+
Sbjct: 216 EIRATAFKDQCDSLYGVFEEGCVYYISSPCRVQMAKKAFNNLNNEYELTFEKDTIVEKAE 275
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILNLK 374
E++D +P+ +F+F +I+ ++S E + +DVIG++ V IL K + +R L L
Sbjct: 276 EQND-VPQIRFNFTNIANLQSVEAGTTIDVIGVLKDVGELSQILSKTTSKPYDKRDLTLV 334
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
D +G SV LT+WG+ KE + E V++ K KV+DF+G+S+ + S + +
Sbjct: 335 DNTGYSVRLTVWGNIA-KEFDSVPE-------SVVAFKGVKVSDFNGRSLSLLSSGSMTV 386
Query: 435 NPDFAEAHELREWFDSGGKNAATVSI-SREIAAG-GAKNEIHKTVSQIKNEGLGRSEKPD 492
+PD +AH+L+ W+D+ G++ S S AAG G + KT+ Q+ LG SEKPD
Sbjct: 387 DPDIEDAHKLKGWYDAQGRSETFASHDSMNNAAGFGDRASSFKTIVQVHEGNLGMSEKPD 446
Query: 493 WVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLL 551
+ +V+A + ++K D+ Y AC + D+ CNKKV Q N +W+C+RC+Q +YRY+L
Sbjct: 447 YFSVKATVVYVKQDTMAYPAC---LTDK-CNKKVLQDENGQWRCERCDQSFPHPEYRYIL 502
Query: 552 QAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRL 611
+ D TG W++ F E G+ ILG A EL LK D+ + E+++ + F
Sbjct: 503 SVNVCDHTGALWLSCFDEVGKIILGTSANELMELKE--NDERAYEELVQRANCRAWNFNC 560
Query: 612 KIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
+ K + + D+QRV+ V ++YS ES L +LI
Sbjct: 561 RAKMDNFQDQQRVRYQVSSVSAIDYSVESARLAELI 596
>gi|328857111|gb|EGG06229.1| hypothetical protein MELLADRAFT_74880 [Melampsora larici-populina
98AG31]
Length = 525
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 187/610 (30%), Positives = 306/610 (50%), Gaps = 98/610 (16%)
Query: 53 MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSE 112
ML+TQLN + G +++ +V+L Y + V R+++V+L +E I I P
Sbjct: 1 MLSTQLNHLIDEGMLQRMCIVKLPSYTINMVGERRVVVLLTVEVI-----DIAKP----- 50
Query: 113 SELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNA 172
E T + T P+ +P+ N+ + P + N+ N
Sbjct: 51 -EPTNEDTKPTITPSKPMVSNSNAKP-----------SINASN----------------- 81
Query: 173 GSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGD 232
R GP +IPI L+PY +W IKARV K D
Sbjct: 82 ---------------------RQGGP--------SVIPIMGLSPYSNKWRIKARVVQKSD 112
Query: 233 LRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQK 292
++ ++NARG+GK+FS D + G+I+ T FN VD+ YE + VG V+ +S+ + A+K
Sbjct: 113 IKHWHNARGEGKLFSVTFSD-ESGQIKATGFNDTVDQLYERLVVGDVFFVSRAKVSLAKK 171
Query: 293 NFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS-FRHISEIESAENNSIVDVIGIVIS 351
FN L +++EI E + VD C + D IP Q + + + ++ E + + D++ ++
Sbjct: 172 QFNTLPHDYEIMFENQTEVDECVDAGD-IPLIQLNKYMQLGQLGEVEKDHVCDIVAVLKD 230
Query: 352 VNPSVPILRKNGM-ETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLS 410
I+ K E +R + L D S S+ +TLWG K+ + V+ +L+
Sbjct: 231 AGELGQIVTKQTQREMSKRDITLVDQSAFSIRMTLWG----KQAEDFNAPVE----SILA 282
Query: 411 VKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG--G 468
+ +V DF G+++ + S+ + INP+ EA +LR W+D+ G ATV+I AG G
Sbjct: 283 FQGVRVGDFQGRNLSMVSSSIMAINPEIPEAFDLRGWYDTEG---ATVAIQSHSGAGSVG 339
Query: 469 AKNEI------HKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQC 522
N+ KT+ Q+K E LG+SEK D+ +RA + FIK+++F Y ACP +C
Sbjct: 340 MNNQAPITEDSLKTIVQVKQEELGQSEKGDYFNLRATVLFIKNETFSYPACPT----ERC 395
Query: 523 NKKVTQSG-NRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKE 581
NKK+ Q G + W+C++C++ D+RYL+Q D +G+ +++ F E G+ +LG A E
Sbjct: 396 NKKMVQDGDDEWKCEKCDKTYPAPDHRYLIQLTASDYSGVMYLSGFNEVGQILLGKTANE 455
Query: 582 LYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESR 641
L L+ E D+ F I + + F + K E+Y D R K ++IR +VN+
Sbjct: 456 LIQLQQE--DEENFKRAILDATYRTWDFVCRAKREVYQDTPRTKYSIIRLGEVNWKEAGL 513
Query: 642 YLLDLISKSF 651
L DLI+K++
Sbjct: 514 GLADLITKNY 523
>gi|350411045|ref|XP_003489220.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Bombus impatiens]
Length = 595
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 167/448 (37%), Positives = 254/448 (56%), Gaps = 30/448 (6%)
Query: 209 IPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
IPI AL+PYQ RW IKARV K +R ++N+RG+GK+FS DL+D + GEIR T F D
Sbjct: 161 IPIVALSPYQNRWVIKARVVNKSAIRTWSNSRGEGKLFSMDLVD-ESGEIRCTAFRDQCD 219
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
+FY++IE+G+VY IS+ SLK A K FN+LKN++E+ L S + C + D IP QF F
Sbjct: 220 KFYDMIEIGKVYYISRASLKTANKQFNNLKNDYEMTLTGDSEIIPCHDIGDKIPTLQFDF 279
Query: 329 RHISEIESAENNSIVDVIGIVISV-NPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
I++IE E N I+DV+ IV S + + + R G + ++R +NL D S V LTLWG
Sbjct: 280 IPINDIEQKEKNDIIDVLAIVKSRGDLQMLVSRTTGKDMKKRDVNLIDESNTMVTLTLWG 339
Query: 388 ----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFS-GKSIGTIPSTQLFINPDFAEAH 442
+F + PVL++K +V +F+ GK++ T+ T + I+PD EAH
Sbjct: 340 TQAEEFSGNDN------------PVLAIKGARVGEFNGGKNLSTLSGTAVQIDPDIPEAH 387
Query: 443 ELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITF 502
LR WF++ G + +SR + ++ T+ + N + + P+ TV+A I
Sbjct: 388 RLRGWFNTTGCHEEAKPLSRAFGSAAQMSQALITIGE-ANSQIDKKNGPEIFTVKATINL 446
Query: 503 IKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGL 561
+++++ Y +CP C KKV Q+ ++C++CN+E YR L + D T
Sbjct: 447 LRTENILYKSCP----SENCKKKVIDQANGMYRCEKCNKEFPNFKYRLLGSLSLADWTDN 502
Query: 562 TWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDE 621
WVTAF + E+ILG A+EL LK D+ + E + F ++F+++ K E +GDE
Sbjct: 503 MWVTAFNDETEKILGITAQELGELKE--NDNDAYLEKLGEVTFKSFIFKIRTKMETFGDE 560
Query: 622 QRVKITVIRADQVNYSSESRYLLDLISK 649
R++ T I V+ + Y DLI+K
Sbjct: 561 NRLRSTCI---DVSPTDCKAYNEDLITK 585
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 60/106 (56%), Gaps = 11/106 (10%)
Query: 12 LINGGDVNSKPLVQVMDIKLIGSTQ--ERYRFLISDSVS-TQHAMLATQLNDRVKTGQVK 68
++NG +V+ +P++Q++ K + S+ ERYR L+SD MLATQLN + +
Sbjct: 12 IMNGIEVD-RPILQILGHKKLSSSNSGERYRLLVSDGKRINSFTMLATQLNSMITDNVLT 70
Query: 69 KGSVVQLIDYICSTVQN----RKIIVVLNMETIILDCE---PIGNP 107
+ S+ Q+ Y S V N ++++V+L+++ + E IGNP
Sbjct: 71 EFSICQINRYAISVVNNAGKQKRVMVILSVDLKVAGDEVGRKIGNP 116
>gi|347441232|emb|CCD34153.1| similar to replication protein A 70 kDa DNA-binding subunit
[Botryotinia fuckeliana]
Length = 609
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 205/620 (33%), Positives = 329/620 (53%), Gaps = 74/620 (11%)
Query: 37 ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMET 96
ER+R ++SD + MLATQ N + G++ KG ++L +Y + V+ ++I+++L+++
Sbjct: 49 ERFRLVVSDIQNFVQCMLATQANHVIHDGKLTKGCFIRLKNYQANEVKGKRILIILDIDV 108
Query: 97 I--ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQ 154
I + E IG P TA K + + V+ N S SG +
Sbjct: 109 IESLGTMEKIGEP--------TAVK------VEEDVKPTNTSIAGSGFY----------- 143
Query: 155 NPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAAL 214
G+ + QP Q P N GP + + A I PI +L
Sbjct: 144 ------------------GNKPQPQQPAAQDRALPSRN----GP-SSSSSHATIYPIESL 180
Query: 215 NPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEII 274
+PY +W IKARVT+K D+R ++ +GK+FS +LLD + GEI+ T FN D YE
Sbjct: 181 SPYAHKWTIKARVTSKSDIRTWSKPNSEGKLFSVNLLD-ESGEIKATGFNEQCDALYETF 239
Query: 275 EVGRVYLI-SKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISE 333
+ G VY I S ++ A+K F+++ N++E+ E + V+ E+ D++P+ +++F +I +
Sbjct: 240 QEGSVYYITSPCRVQIAKKQFSNINNDYELMFERDTLVEKA-EDQDNVPQVRYNFSNIGD 298
Query: 334 IESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILNLKDTSGRSVELTLWGDFCNK 392
++S E +S VD+I ++ V I K + +R L L D +G SV LT+WG
Sbjct: 299 LQSIEKDSTVDLIAVLKEVGEISEITSKTTSKPYSKRELTLVDETGYSVRLTIWG----- 353
Query: 393 EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGG 452
K D V++ K KV+DF G+S+ + S + +PD EAH+L+ W+DS G
Sbjct: 354 ---KTATSFDASPESVVAFKGVKVSDFGGRSLSLLSSGSMSFDPDIQEAHKLKGWYDSQG 410
Query: 453 KN---AATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEK-PDWVTVRAFITFIKSDSF 508
+ A+ +++ AAGG ++ I KT++Q+K+EGLG SE+ D+ + RA I +IK D+F
Sbjct: 411 RTSNFASHSNLASAGAAGGRQDPI-KTIAQVKDEGLGMSEENTDYFSSRATIVYIKQDNF 469
Query: 509 CYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAF 567
CY AC + CNKKV Q+ W+C++CNQ + +YRY+L + D TG W+TAF
Sbjct: 470 CYPACL----NENCNKKVVDQNDGTWRCEKCNQSHPKPEYRYILALNVNDHTGQMWLTAF 525
Query: 568 QESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKIT 627
E G I+G A EL LK D + F+++ K + Y D+ RV+ +
Sbjct: 526 DEVGRLIMGKSADELMELKE--NDPPAMERVFEDANCKMMTFKVRCKTDTYQDQARVRYS 583
Query: 628 VIRADQVNYSSESRYLLDLI 647
V+ A VNY++++ L +LI
Sbjct: 584 VMSALAVNYAADALKLAELI 603
>gi|112983132|ref|NP_001036938.1| replication protein A1 [Bombyx mori]
gi|55700848|dbj|BAD69789.1| Replication protein A large subunit [Bombyx mori]
Length = 598
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 208/652 (31%), Positives = 333/652 (51%), Gaps = 89/652 (13%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVST-QHAMLATQ 57
M NL+ ++ I G P++Q++ K I +RYR L+SD T AMLATQ
Sbjct: 1 MSYNLSEGALETIMKGGNYDAPIIQMLGTKKIQGNDAGDRYRLLVSDGKYTYSFAMLATQ 60
Query: 58 LNDRVKTGQVKKGSVVQLIDYICSTVQN----RKIIVVLNMETIILDC----EPIGNPKI 109
LN + +G++ SV+Q+ ++ + ++N K ++++ TII + IGNP+
Sbjct: 61 LNIMLLSGELTDYSVIQVDQFVTTLLKNVGKGEKRVIIILALTIIANGRDVRHKIGNPQP 120
Query: 110 FSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRA 169
+SE +AQ+ P P PV TP
Sbjct: 121 WSEEATSAQRPEPK---PAPV------------------------------TP------- 140
Query: 170 PNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTA 229
F V+P N + +K P I++L+PYQ +W I+ARV +
Sbjct: 141 --------KFTAKVEP---KAANLDSSMLSVKMTNP-----ISSLSPYQNKWVIRARVMS 184
Query: 230 KGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKP 289
K +R ++NA+G+ K+FS D + GEIR T F D FY++I+V +VY IS+ ++K
Sbjct: 185 KTPIRTWSNAKGERKLFSMYPCD-ETGEIRATAFKNECDTFYDMIQVDKVYYISRCAIKT 243
Query: 290 AQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIV 349
A K F LKN++E+ A + V ++ ++P Q+ F ISEI + E +++D+I +
Sbjct: 244 ANKKFTTLKNDYEMTFTAETVVGEYVGDESAVPTVQYDFLPISEIANKETETLIDLIDVC 303
Query: 350 ISVNPSVPILRKN-GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPV 408
S + + K+ G ++R + L D SG +V LTLWG+ E +K + + P+
Sbjct: 304 KSASDVQELTAKSTGKLLKKREVMLVDASGGAVTLTLWGN----EAEKFEGNTN----PI 355
Query: 409 LSVKSGKVNDFSG-KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIA-- 465
L+VK ++ +F+G KS+ + ST L +NPD EAH+LR W+D+GG +A V+IS +
Sbjct: 356 LAVKGARLTEFNGSKSLSCLSSTMLRLNPDVPEAHKLRGWYDNGGADADIVNISAKSGNF 415
Query: 466 AGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKK 525
GG+ I + S+ ++ LG EK D+ ++ +TF S++ Y ACP QCNKK
Sbjct: 416 TGGSNEWI--SFSEAESRQLGTGEKGDYYSLLGVLTFTFSENAVYKACP----QEQCNKK 469
Query: 526 -VTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYM 584
V Q ++C++CN+E +R LL A + D TG VT F E+ E +LG A+E+
Sbjct: 470 LVDQENGLFRCEKCNREYPNYKHRILLAANVSDPTGDQRVTLFNEAAETMLGKSAEEIAR 529
Query: 585 LKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNY 636
L D + +I F ++F+ + K E + DE R+K TV+ V+Y
Sbjct: 530 LSE--YDKNEYNKIFDEVKFKTFVFKFRTKMENFNDESRLKTTVVNVQPVDY 579
>gi|169600091|ref|XP_001793468.1| hypothetical protein SNOG_02875 [Phaeosphaeria nodorum SN15]
gi|160705373|gb|EAT89606.2| hypothetical protein SNOG_02875 [Phaeosphaeria nodorum SN15]
Length = 578
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 188/623 (30%), Positives = 316/623 (50%), Gaps = 77/623 (12%)
Query: 37 ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMET 96
+R+R ++SD + M+AT ND V +GQ+KKGS+V+L+ Y V+++ I++++ +E
Sbjct: 12 QRFRVVLSDIRNFIQTMIATTANDIVTSGQLKKGSIVRLVKYNPQQVKDKNILIIMELEV 71
Query: 97 I--ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQ 154
+ + + IG P E K+ P PQP +
Sbjct: 72 LSQYGELDKIGQP------EALDTKSDP----PQPAAI---------------------- 99
Query: 155 NPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPY-QPPPNFRNHGPILKNEAPARIIPIAA 213
SG +F + QPP QP N H + + PI +
Sbjct: 100 ---------SG-----------NNFYGSKQPPAPQPQRNLPVHQSNPATSSHPHLYPIES 139
Query: 214 LNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEI 273
L+PY +W I+AR T K D++ ++NA+G GK+FS +LLD D GEIR T F ++ + +
Sbjct: 140 LSPYAHKWTIRARCTNKSDMKEWHNAKGTGKLFSVNLLD-DTGEIRATAFTEAAEKLFPV 198
Query: 274 IEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHIS 332
EVG VY IS + A+K F++L N++E+ E + V+ E+ D+ P+ +F+F I
Sbjct: 199 FEVGTVYYISAPCRVTLAKKQFSNLPNDYELQFEKDTEVEKA-EDQDNKPQIRFNFTKIG 257
Query: 333 EIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSGRSVELTLWGDFCN 391
++ S E ++ +D +G++ V I KN + +R L L D S SV LT+WG
Sbjct: 258 DLNSVEKDTTIDTVGVLKEVAEVNTITSKNTNKDFSKRELTLADDSQTSVRLTIWG---- 313
Query: 392 KEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSG 451
K E D +++ K KV+DF G+S+ + S + ++PD EAH+LR WF++
Sbjct: 314 ----KTAETFDAPLESIIAFKGVKVSDFGGRSLSLLSSGSMMVDPDIDEAHKLRGWFNAV 369
Query: 452 GKNAATVSISREI--AAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFC 509
G+N AT S + + A+GG+ +K +SQ E + P +++++A + ++K+ +
Sbjct: 370 GQN-ATFSTHQNMAGASGGSSKNENKLISQCIEEETYLQDTPSYMSLKASVVYVKNTTVA 428
Query: 510 YTACPLMIGDRQCNKKVTQSG-NRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQ 568
Y AC CNKKV + W C++C Q E +YRY+L + D TG W++ F
Sbjct: 429 YPAC----STAGCNKKVIEENPGSWWCEKCQQSFPEPNYRYVLSVNVADHTGTLWLSCFD 484
Query: 569 ESGEEILGCPAKELYMLKYELQDD--VRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKI 626
E+G+ I+G A E +K + +++ F ++ + FR++ K E Y D+ + +
Sbjct: 485 EAGQSIVGMSANEAMKIKVDDEENNTQNFMTAMQEATCKTFNFRVRAKMETYQDQPKPRY 544
Query: 627 TVIRADQVNYSSESRYLLDLISK 649
V+ +NY+ E+ L LI +
Sbjct: 545 QVMNMYPLNYAQEANKLAQLIKQ 567
>gi|354546965|emb|CCE43698.1| hypothetical protein CPAR2_213410 [Candida parapsilosis]
Length = 644
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 194/660 (29%), Positives = 331/660 (50%), Gaps = 72/660 (10%)
Query: 14 NGGDVNSKPLV-QVMDIKLIGS--TQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKG 70
+G D PLV QV ++K + + ++YR L+SD V + ++ + ++ +
Sbjct: 18 DGHDKVKCPLVFQVTNLKSVNTMNNSKKYRILLSDGVYSTQGIIEEKCTPYLENNNWSRY 77
Query: 71 SVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKI-----FSESELTAQKTIPSNN 125
+Q ++ + + +++ ++E + E P I F+E A T+
Sbjct: 78 CTIQ-VNAFRTLATAKHFLIIEDVEILTPTGEKPTTPLINIDTYFAEHPEEAALTVTKK- 135
Query: 126 LPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQP 185
QNS Q P + +TP A + G+ S T
Sbjct: 136 --------------------QNSVDEKEQIPSTTNTPPVAQSTASSIGAAPASSTTTATA 175
Query: 186 PYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKV 245
Q P + G APARI PI ++PYQ W IKARV+ KG+LR ++NA+G+GKV
Sbjct: 176 TKQQYPPSKGVG----QPAPARISPIETISPYQNTWTIKARVSYKGELRSWSNAKGEGKV 231
Query: 246 FSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFL 305
FS + LD + EI+ + FN +R Y ++E G+VY ISK + A+K FN+L + +E+ L
Sbjct: 232 FSINFLD-ESDEIKASAFNESAERAYNLLEEGKVYYISKAKVGAARKKFNNLTHPYELTL 290
Query: 306 EATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GM 364
E + + C +E D +PK F+F + +I++ E N+IVDV+G + VNP I K+ G
Sbjct: 291 EKDTEITECFDESD-VPKLNFNFVKLDKIQNLEPNAIVDVLGALKVVNPPFQITAKSTGK 349
Query: 365 ETQRRILNLKDTSGRSVELTLWG----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFS 420
RR + + D +G +V++ LW DF +EG V++ K KV+DF+
Sbjct: 350 AFDRRDITIVDETGFAVDVGLWNNTAVDFSVEEGT------------VIAFKGCKVSDFN 397
Query: 421 GKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEI--HKTVS 478
G+S+ + + NP E+++L+ WFD+ G S+ E A + + + KT++
Sbjct: 398 GRSLSLTQAGSIVPNPGTPESYQLKGWFDNVGVKENFKSMKTETNASSSLDRLANRKTIA 457
Query: 479 QIKNE------GLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQ--------CNK 524
Q++ E G + ++ + TV+A +F K ++F Y AC ++ + CNK
Sbjct: 458 QVEEETNNNIDGGDQQQQSGYFTVKACFSFTKPENFAYPACTNIVSNNTDSSKPGLPCNK 517
Query: 525 KVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYM 584
K+ + ++W+C+RC+ DE YRY+L I D TG W T F E +++LG A EL
Sbjct: 518 KLVEVNDKWRCERCDLSYDEPTYRYILYISITDATGQLWTTLFDEQAKKLLGIDANEL-- 575
Query: 585 LKYELQDDVR-FGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYL 643
+K L ++ E I F +Y FRL++K++ + D+ +++ + ++Y++E +L
Sbjct: 576 MKLSLPNESHAVAEYISRAYFKEYNFRLRVKQDTFNDQLKLRYQCVGLSDIDYNTECEFL 635
>gi|149248590|ref|XP_001528682.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448636|gb|EDK43024.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 658
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 201/664 (30%), Positives = 328/664 (49%), Gaps = 74/664 (11%)
Query: 22 PLV-QVMDIKLIGST--QERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
PLV Q+ ++K + + Q +YR L+SD V + H ++ ++ V + + +Q+ +
Sbjct: 26 PLVFQITNMKAVDTVNNQRKYRILLSDGVYSTHGLINENCTAYLENNNVSRYATIQVNRF 85
Query: 79 ICSTVQNRKIIV----VLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNN 134
T + +LN L +PI F+E A I + R N
Sbjct: 86 STLTSTKHFFFIEDFELLNNAGEKLVEKPISVDDYFAEHPDEASAAITAKRGDSLDR-NE 144
Query: 135 YSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPN----AGSIVRSFQPTVQPPYQPP 190
AP G+ +TP P + Q Q P P
Sbjct: 145 SPAPG-----------------GAGATPPVAQSTYPGQQQQQQQQQQQQQAVAQNPQYPK 187
Query: 191 PNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDL 250
P R G ++ RI PI L+PYQ W I+ARV+ KG+LR ++NA+G+GKVFS +
Sbjct: 188 P--RGVGLGAGDKNGPRISPIETLSPYQNNWTIRARVSYKGELRTWSNAKGEGKVFSVNF 245
Query: 251 LDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATST 310
LD + EI+ + FN ++ Y I+E G+VY ISK + A+K FN+L + +E+ LE S
Sbjct: 246 LD-ESDEIKASAFNETAEKAYNILEEGKVYYISKAKVAAARKKFNNLTHPYELQLEKDSE 304
Query: 311 VDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRR 369
+ C +E + +PK F+F + +I++ + N+IVDVIG + VNP I K+ G RR
Sbjct: 305 ITECFDESN-VPKLNFNFVKLDQIQNLDANAIVDVIGALKVVNPPFQITAKSTGKAFDRR 363
Query: 370 ILNLKDTSGRSVELTLW----GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIG 425
+ + D SG +V++ LW DF +EG V++ K KV+DF+G+++
Sbjct: 364 DITIVDESGFAVDIGLWNQTAADFAVEEGS------------VIAFKGCKVSDFNGRTLS 411
Query: 426 TIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEI------HKTVSQ 479
S L NP E++ L+ W+D+ G S+ E AG + K +SQ
Sbjct: 412 LTQSGSLIANPGIPESYHLKGWYDNIGVKENYKSLKTESGAGSNNLSVMERFAQRKMISQ 471
Query: 480 IKNEGLG---RSEKPDWVTVRAFITFIKSDSFCYTACPLMI-----------GDRQ--CN 523
+++E +G EK ++ + +A +++ K ++F Y ACP ++ G RQ CN
Sbjct: 472 VEDENIGGQNGGEKLEYFSTKASLSYAKPENFAYPACPNILSQSGDASLSGAGARQNPCN 531
Query: 524 KKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELY 583
KK+ Q ++W+C+RCN E D +RY+L I D +G WVT F E +++LG A EL
Sbjct: 532 KKLVQYDDKWRCERCNMEFDRPTWRYILNCGIMDASGQIWVTLFDEQAKKLLGMEANELV 591
Query: 584 MLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYL 643
L E Q+ E+I F ++ FR++ K++ + D+ +++ + ++Y++E YL
Sbjct: 592 ELSQENQNAA--AEVIHRNYFREFNFRIRAKQDTFNDQLKIRYQCMGLTDIDYTAECDYL 649
Query: 644 LDLI 647
I
Sbjct: 650 CKEI 653
>gi|168053891|ref|XP_001779367.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669165|gb|EDQ55757.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 451
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 159/454 (35%), Positives = 257/454 (56%), Gaps = 20/454 (4%)
Query: 207 RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV 266
R+ PI +LNPYQG W IK RVT+K LR + NARGDG VF+ +L D DG +I+ T F
Sbjct: 6 RVYPILSLNPYQGNWTIKVRVTSKSPLRTFKNARGDGNVFNVELTDEDGTQIQATMFKEA 65
Query: 267 VDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDS--IPKQ 324
D+FY+++++ +VY ISKGSL+ A K + +KN++E+ L + S + E + +P
Sbjct: 66 ADKFYDVLQLDKVYFISKGSLRMANKQYATVKNDYEMTLNSNSEIVEADIESSTFKLPSA 125
Query: 325 QFSFRHISEI--ESAENNSIVDVIGIVISVNPSVPILRK-NGMETQRRILNLKDTSGRSV 381
++F IS++ + + DV+G+V SV P + RK N E +R + L D S ++V
Sbjct: 126 TYNFTKISDLGRHISSKRFVADVLGVVQSVGPLTTVNRKSNNDEIPKRDIVLLDQSRQTV 185
Query: 382 ELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEA 441
LTLW + KEG L +++ P+L K +++DF G S+ + +T + INP +A
Sbjct: 186 VLTLWNNMAVKEGASLADLIAES--PILMAKGLRLSDFQGVSLSSTMNTMVLINPVIPDA 243
Query: 442 HELREWFDSGGKNAATVSISREIAAGGAKNEIHKT----VSQIKNEGLGRSEKPDWVTVR 497
+ELR W++ G+ A+ + G +N T +S I +G KP + VR
Sbjct: 244 NELRTWYEEDGRTASLTPAGASLPGGTNQNRSSFTDRAVLSDIIQPNVGEG-KPMYFNVR 302
Query: 498 AFITFIKSD-SFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQI 555
A+I+FIK D + Y AC + CN+KV QS + + C+ C D+C RY++QA++
Sbjct: 303 AYISFIKPDQAMWYLAC------QTCNRKVVEQSSSSYWCEGCQNHYDKCSRRYIMQAKL 356
Query: 556 QDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKE 615
D +G WV+AF E E +LG A L ++ + DD ++ +R ++ ++R+ +
Sbjct: 357 SDSSGEAWVSAFNEQAESLLGVSADNLSEMRNQAGDDNQYQNAVRKAMWQPCVYRISAAQ 416
Query: 616 ELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
Y E+R ++TV V++ +ES++LL I+K
Sbjct: 417 TEYMSEKRQRLTVRTVVPVDWVAESKHLLAKITK 450
>gi|449532803|ref|XP_004173368.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Cucumis sativus]
Length = 374
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 163/349 (46%), Positives = 217/349 (62%), Gaps = 56/349 (16%)
Query: 21 KPLVQVMDIKLIGSTQ----ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLI 76
+P++QV+D+KL+ ++Q ER+R L+SD Q ML TQLN+ VK+G+++KGS+V+L
Sbjct: 29 QPILQVIDLKLVNTSQQSGSERFRLLVSDGTHFQQGMLGTQLNELVKSGKLQKGSIVRLR 88
Query: 77 DYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTA------------------- 117
Y+C+ VQ R II+V+ ++ I C+ IG P + S A
Sbjct: 89 QYVCNPVQERLIIIVIELDVIEEMCDIIGEPVSATRSSANALSGNPLPSVGGLGASPGSG 148
Query: 118 ---QKTIPSNNLPQPVRVNNYSAPNSGTF-NLQNSGTFNSQ-NPGSFSTPNSGT-FRAP- 170
+ + S + QP +VN P+ G++ N +G F++ P S+S +SG+ F P
Sbjct: 149 MIGKGNVSSASFEQP-KVNQSHVPHMGSYSNPPETGRFSASIAPPSYSKTDSGSRFNGPS 207
Query: 171 --------------NAGSIVRSFQPTV--------QPPYQPPPN-FRNHGPILKNEAPAR 207
N+GS + +P + QP YQ PP+ + N GPI KNEA R
Sbjct: 208 PLTGSYGDQKMAYHNSGSDIP--RPPLNSNAYARPQPIYQQPPSMYSNRGPIAKNEAAPR 265
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I+PI+ALNPYQGRW IKARVT+KG+LR YNN RGDGKVFSFDLLD+ GEIRVTCFN V
Sbjct: 266 IMPISALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDAYRGEIRVTCFNTVA 325
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE 316
D+FY IE G+VY ISKGSLKPAQKNFNHLKN++EIFLE TST+ C E
Sbjct: 326 DQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDYEIFLENTSTIQPCFE 374
>gi|50287931|ref|XP_446394.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525702|emb|CAG59321.1| unnamed protein product [Candida glabrata]
Length = 627
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 188/651 (28%), Positives = 334/651 (51%), Gaps = 74/651 (11%)
Query: 23 LVQVMDIKLIGSTQERYRFLI--SDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYIC 80
+ QV++I+ ++ +FLI SD V A+ ++ + + +G +++ +
Sbjct: 27 VYQVINIRKADPSKPNKKFLIMISDGVYHMKALFKADAIPKLHSMNIDRGDIIKTLRVEP 86
Query: 81 STVQNRKIIVVL-NMETIILDCEPIGNPKIFSES-------ELTAQKTIPSNNLPQPVRV 132
++ +K+++V+ + + + E + + F +S E+ A + P++ PQ +
Sbjct: 87 LLIKEKKLVLVIEDFDMVQSGAEVVDSNTQFLDSVLANRLNEVIAARKDPNSPFPQQQQQ 146
Query: 133 NNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPN 192
+ S+ +G G+ P+S T S F +
Sbjct: 147 VDSSSNVNGN--------------GTLGMPSSTTAIGNATTSHNNKFNDSA--------- 183
Query: 193 FRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLD 252
++ I I L+PYQ W IKARV+ KGD++ ++N RG+GK+ + + LD
Sbjct: 184 ---------SQKSRAIFAIEQLSPYQNVWTIKARVSYKGDIKTWHNQRGEGKLLNVNFLD 234
Query: 253 SDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVD 312
+ GEIR T FN F EI++ G+VY +SK L+PA+ F +L + +E+ L+ + ++
Sbjct: 235 T-SGEIRATAFNDNATAFNEILQEGKVYYVSKARLQPAKPQFTNLSHPYELNLDRETVIE 293
Query: 313 LCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILN 372
+E++ +PK F+F + I+S ENNS VDV+GI+ +VNP + + G + RR +
Sbjct: 294 ESFDENN-VPKTHFNFIKLDNIQSQENNSNVDVLGIIQTVNPHFELTSRAGKKFDRRDIQ 352
Query: 373 LKDTSGRSVELTLWG----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIP 428
+ D SG ++ + LW DF EG V+++K +V+DF GKS+
Sbjct: 353 IVDDSGFAISVGLWNQQALDFNLPEGS------------VVAIKGVRVSDFGGKSLSMGF 400
Query: 429 STQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG--GAKN-----EIHKTVSQIK 481
++ L NP+ EA++L+ W+D GK+ S+ ++ AG A N T+++ +
Sbjct: 401 NSTLIANPEIPEAYKLKGWYDQQGKDQDFTSLKQDAGAGTTSAANLAKFISQRITIARAE 460
Query: 482 NEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQ 540
E LG++E+ D+ +V+A I+F+K D+F Y AC + CNKKV Q W+C++C+
Sbjct: 461 AENLGKNERGDFFSVKAAISFMKVDNFAYPAC----SNENCNKKVIEQPDGTWRCEKCDI 516
Query: 541 EIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIR 600
+RY+L I D+TG W+T F + +++LG A L LK D+ F +
Sbjct: 517 NNPSPRWRYILTISIIDETGNLWLTLFDDQAKQLLGVDANTLMSLKENDPDE--FTRTTQ 574
Query: 601 SRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSF 651
+ NQY FR++ +E+ Y D+ R++ TV ++N+ +E+ YL D ++K F
Sbjct: 575 NVQMNQYDFRIRAREDNYNDQTRIRYTVANLHKLNFKAEADYLADELTKVF 625
>gi|448514363|ref|XP_003867094.1| Rfa1 DNA replication factor A [Candida orthopsilosis Co 90-125]
gi|380351432|emb|CCG21656.1| Rfa1 DNA replication factor A [Candida orthopsilosis Co 90-125]
Length = 628
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 191/654 (29%), Positives = 329/654 (50%), Gaps = 76/654 (11%)
Query: 14 NGGDVNSKPLV-QVMDIKLIGS--TQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKG 70
+G D PLV QV ++K + + ++YR L+SD V + ++ + ++ +
Sbjct: 18 DGHDKVKCPLVFQVTNLKSVNTMNNSKKYRILLSDGVYSTQGIIEEKCTPYLENNNWSRY 77
Query: 71 SVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKI-----FSESELTAQKTIPSNN 125
+Q ++ + + +++ ++E + E P I F+E A T+
Sbjct: 78 CTIQ-VNAFRTLATAKHFLIIEDVEILTPTGEKPTTPLINIDTYFAEHPEEAALTVTKK- 135
Query: 126 LPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQP 185
QNS Q PG+ TP + + S P+++
Sbjct: 136 --------------------QNSVDEKEQTPGT--TP-----PVAQSTATAASAAPSIKQ 168
Query: 186 PYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKV 245
Y PP+ APARI PI ++PYQ W IKARV+ KG+LR ++NA+G+GKV
Sbjct: 169 QY--PPSKAGQA------APARISPIETISPYQNTWTIKARVSYKGELRSWSNAKGEGKV 220
Query: 246 FSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFL 305
FS + LD + EI+ + FN +R Y ++E G+VY ISK + A+K FN+L + +E+ L
Sbjct: 221 FSVNFLD-ESDEIKASAFNESAERAYNLLEEGKVYFISKAKVGAARKKFNNLTHPYELTL 279
Query: 306 EATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GM 364
E + + C +E D +PK F+F + ++++ E N+I+DV+G + VNP I K+ G
Sbjct: 280 EKDTEITECFDESD-VPKLNFNFVKLDKVQNLEPNAIIDVLGALKIVNPPFQITAKSTGK 338
Query: 365 ETQRRILNLKDTSGRSVELTLWG----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFS 420
RR + + D +G +V++ LW DF +EG V++ K KV+DF+
Sbjct: 339 AFDRRDITIVDETGFAVDVGLWNNTAVDFSVEEGT------------VIAFKGCKVSDFN 386
Query: 421 GKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEI--HKTVS 478
G+S+ + + NP E+++L+ WFD+ G S+ E A + + + KT++
Sbjct: 387 GRSLSLTQAGSIVPNPGTPESYQLKGWFDNIGVKENFKSMKTETNASSSIDRLANRKTIA 446
Query: 479 QIKNEGLG-RSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQ--------CNKKVTQS 529
Q++ E SE+ + T++A +F K ++F Y AC +I + CNKK+
Sbjct: 447 QVEEENNNLDSEQSGYFTIKACFSFTKPENFAYPACTNIIANTTDSTKPGLPCNKKLAPV 506
Query: 530 GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYEL 589
++W+C+RC+ DE YRY+L I D TG W T F E +++LG A EL + E
Sbjct: 507 NDKWRCERCDLSYDEPTYRYILYISITDATGQLWTTLFDEQAKKLLGIDANELMKMSNE- 565
Query: 590 QDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYL 643
+ + E I F +Y FRL++K++ + D+ +++ + ++Y++E +L
Sbjct: 566 NEKMVVAEYISRAYFKEYNFRLRVKQDTFNDQLKLRYQCVGLSDIDYNTECEFL 619
>gi|378731776|gb|EHY58235.1| replication factor A1 [Exophiala dermatitidis NIH/UT8656]
Length = 608
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 194/639 (30%), Positives = 332/639 (51%), Gaps = 76/639 (11%)
Query: 22 PLVQVMDIKLIGST---QERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
P+VQ + IK I + QER+R + SD+ + MLA N V +++G +VQL+ Y
Sbjct: 31 PVVQCVQIKPIAAQPGGQERHRVIFSDTKNYIQTMLAVHQNSLVDQKILRRGVLVQLVGY 90
Query: 79 ICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYS 136
+ V+ ++I++V +++ + + + +G+PK +K P N
Sbjct: 91 SANRVKGKRILIVTDIKVLEDYGEHDKLGDPKPLELKTEEEEKPAP-----------NTI 139
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNH 196
N N Q N P S + P+S +
Sbjct: 140 TSNGFYGNKQEQPKQNRSMP-SHTKPSSSS------------------------------ 168
Query: 197 GPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGG 256
A A I PI A++PY +W IKAR T+K +++ ++N G+GK+FS +LLD + G
Sbjct: 169 -------AHANIYPIEAISPYSNKWTIKARCTSKSEIKTWHNRNGEGKLFSVNLLD-ESG 220
Query: 257 EIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
EIR T FN D+ Y++ + G+VY IS + A+K F++L N++E+ E + V+
Sbjct: 221 EIRATGFNDQCDQLYDVFQEGQVYYISSPCRVTFAKKQFSNLANDYELHFERDTVVEKA- 279
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK-NGMETQRRILNLK 374
EE D +P+ +++F +I++++S E ++ +D+I I+ V K G ++R L L
Sbjct: 280 EEQDGVPQVRYNFTNIADLQSVEKDTTIDIIAILKDVGEVGQATSKTTGKPYEKRELTLV 339
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
D +G SV +T+WG K +DV V+ K KV+DF G+S+ + S +
Sbjct: 340 DNTGYSVRMTIWG--------KTAASLDVQPGSVVVFKGVKVSDFGGRSLSLLSSGSMTA 391
Query: 435 NPDFAEAHELREWFDSG---GKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKP 491
NPD EAH+L+ W++S G + ++ ++ G++++ KT+SQ+K E LG SEKP
Sbjct: 392 NPDMPEAHKLKGWWESHDRPGNFSTHENVQGAVSGVGSRSDPFKTISQVKEEQLGMSEKP 451
Query: 492 DWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYRYL 550
D+ +++A + +IK + F Y AC L G CN+KV + +W+C++C+ + +YRY+
Sbjct: 452 DFFSIKATVHYIKQEPFAYPAC-LSEG---CNRKVVEIDPGQWRCEKCDTTHPKPEYRYI 507
Query: 551 LQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFR 610
+ A + D TG WV F ++G +LG A EL +K E Q V EI + + ++
Sbjct: 508 ISANVSDHTGQLWVNCFDDTGRLLLGRTADELMAIKDEDQKQVE--EIFSEANYKTWNWK 565
Query: 611 LKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
K + + + ++QRV+ V A +++ +ES L+ LI +
Sbjct: 566 CKARLDNFQEQQRVRYQVTSAAPLDFVTESNKLITLIKQ 604
>gi|308811891|ref|XP_003083253.1| Single-stranded DNA-binding replication protein A (RPA), large (70
kD) subunit and related ssDNA-binding proteins (ISS)
[Ostreococcus tauri]
gi|116055132|emb|CAL57528.1| Single-stranded DNA-binding replication protein A (RPA), large (70
kD) subunit and related ssDNA-binding proteins (ISS)
[Ostreococcus tauri]
Length = 718
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 179/576 (31%), Positives = 301/576 (52%), Gaps = 35/576 (6%)
Query: 86 RKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNL 145
R+I+VV+ E + + IG P+++ E AQ ++ P + N Y + +
Sbjct: 2 RRIMVVIEAEVVEKYDKVIGQPRVWQPQE--AQN---GSSHGAPAQRNAYGSAPAPMVQG 56
Query: 146 QNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAP 205
+ GT N + P T G + +R G + +NEAP
Sbjct: 57 YSGGT----NGSGLAAPQQRTGGGGYGGGAPAATG-----------QYRQSGAVARNEAP 101
Query: 206 ARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
++I + LNPYQ RW ++AR+T + +LR Y+N +GDGKV F++LD++G E++ F
Sbjct: 102 SQIRTLNELNPYQNRWTVRARITGRLELRSYSNTKGDGKVLGFEILDAEGTEMKCVGFGD 161
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQ 325
RF + GRVY ISK S+ A +N + +++E+ + + C + + SI K +
Sbjct: 162 AAVRFSNELHHGRVYEISKASIS-ASRNPKYAIHQYEMKFDQNTVFVECPDAERSIEKVR 220
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
+ F+ ++++ +A + DVIGI V I++++G ET +R + ++D S ++E TL
Sbjct: 221 YKFKKVADLATAMPGEMADVIGIAYHVGELATIMKRDGGETTKRSVMIRDNSDAAIEFTL 280
Query: 386 WGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELR 445
W + G +++ ++ G PV++VK+ +V +F GK++GT+ ST + INPD EA E+R
Sbjct: 281 WDPHSVELGGQIESLIASGEKPVIAVKNARVGEFQGKNMGTVGSTSVEINPDREEATEMR 340
Query: 446 EWFDSGGKNAATVSISREIAAGGAKNEIHKTVS-----QIKNEGLGRSEKP-DWVTVRAF 499
WFD GG +A S+S G+ +S Q+ +E + + E +V A
Sbjct: 341 IWFDQGGADAQFTSLSGTGGGEGSGRSGGNVLSIGRIVQLGDELMAQGEGAVAYVNTCAM 400
Query: 500 ITFIK--SDSFCYTACPLMIGDRQCNKKVTQSGNR--WQCDRCNQE-IDECDYRYLLQAQ 554
I IK + Y +CPLM G+RQC KK+ + W C+R + E I+ D+RY+
Sbjct: 401 IKHIKPGQEGPFYASCPLMNGERQCMKKLRTVDDTGVWSCERHSGEHIEAADWRYMFSCV 460
Query: 555 IQDQTGLTWVTAFQESGEEIL-GCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKI 613
I D + WVT F GE+++ G A E+ + E D+ F + + R FN Y RLK+
Sbjct: 461 IADHSAEQWVTVFGSEGEKVMSGMTAGEMRRMFDEQPDE--FEKFLVGRHFNMYQLRLKV 518
Query: 614 KEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+ YGD R+K T+ +N+++ ++ LL+ I+K
Sbjct: 519 AVDTYGDMPRIKCTLAEISPINFAAANKKLLEKIAK 554
>gi|340714568|ref|XP_003395799.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Bombus terrestris]
Length = 595
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/448 (36%), Positives = 254/448 (56%), Gaps = 30/448 (6%)
Query: 209 IPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
IPI AL+PYQ RW IKARV K +R ++N+RG+GK+FS DL+D + GEIR T F D
Sbjct: 161 IPIVALSPYQNRWVIKARVVNKSAIRTWSNSRGEGKLFSMDLVD-ESGEIRCTAFRDQCD 219
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
+FY++IE+G+VY IS+ +LK A K FN+LKN++E+ L S + C + D IP QF F
Sbjct: 220 KFYDMIEIGKVYYISRATLKTANKQFNNLKNDYEMSLTGDSEIIPCHDIGDKIPTLQFDF 279
Query: 329 RHISEIESAENNSIVDVIGIVISV-NPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
I++IE E N I+D++ IV S + + + R G + ++R +NL D S V LTLWG
Sbjct: 280 IPINDIEQKEKNDIIDILAIVKSRGDLQMLVSRTTGKDMKKRDINLIDESNTMVTLTLWG 339
Query: 388 ----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFS-GKSIGTIPSTQLFINPDFAEAH 442
+F + PVL++K +V +F+ GK++ T+ T + I+PD EAH
Sbjct: 340 TQAEEFSGNDN------------PVLAIKGARVGEFNGGKNLSTLSGTAVQIDPDIPEAH 387
Query: 443 ELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITF 502
LR WF++ G + +SR + ++ T+ + N + + P+ TV+A I
Sbjct: 388 RLRGWFNTTGCHEEAKPLSRAFGSAAQMSQALITIGE-ANSQIDKKIGPEIFTVKATINL 446
Query: 503 IKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGL 561
+++++ Y +CP C KKV Q+ ++C++CN+E YR L + D T
Sbjct: 447 LRTENILYKSCP----SENCKKKVIDQANGMYRCEKCNKEFPNFKYRLLGSLSLADWTDN 502
Query: 562 TWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDE 621
WVTAF + E+ILG A+EL LK D+ + E + F ++F+++ K E +GDE
Sbjct: 503 MWVTAFNDETEKILGITAQELGELKE--NDNDAYLEKLGDVTFKSFIFKIRTKMETFGDE 560
Query: 622 QRVKITVIRADQVNYSSESRYLLDLISK 649
R++ T I V+ + Y DLI+K
Sbjct: 561 NRLRSTCI---DVSPTDCKAYNEDLITK 585
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 60/106 (56%), Gaps = 11/106 (10%)
Query: 12 LINGGDVNSKPLVQVMDIKLIGSTQ--ERYRFLISDSVS-TQHAMLATQLNDRVKTGQVK 68
++NG +V+ +P++Q++ K + S+ ERYR L+SD MLATQLN + +
Sbjct: 12 IMNGIEVD-RPILQILGHKKLSSSNSGERYRLLVSDGKRINSFTMLATQLNSMITDNVLT 70
Query: 69 KGSVVQLIDYICSTVQN----RKIIVVLNMETIILDCE---PIGNP 107
+ S+ Q+ Y S V N ++++V+L+++ + E IGNP
Sbjct: 71 EFSICQINRYAISVVNNAGKQKRVMVILSVDLKVAGDEVGHKIGNP 116
>gi|121715180|ref|XP_001275199.1| replication factor A 1, rfa1 [Aspergillus clavatus NRRL 1]
gi|119403356|gb|EAW13773.1| replication factor A 1, rfa1 [Aspergillus clavatus NRRL 1]
Length = 603
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 196/640 (30%), Positives = 332/640 (51%), Gaps = 82/640 (12%)
Query: 21 KPLVQVMDIKLIG---STQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLID 77
+P+VQ + IK + + ERYR + SD + MLATQ N V +G +KKG V+L
Sbjct: 27 EPIVQCVQIKPLPPQPNHPERYRAVFSDITNYVQTMLATQANHFVTSGMLKKGCFVRLKS 86
Query: 78 YICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNY 135
+ ++V+ +KI+++L++E + + + E IG PK +K PQP +++
Sbjct: 87 FQANSVKGKKILIILDLEVLQELGEAEKIGEPKPLENKSDVEEK-------PQPTTISS- 138
Query: 136 SAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPT-VQPPYQPPPNFR 194
+G + S+ QP V+ QP
Sbjct: 139 ------------NGFYGSK------------------------IQPQRVESGVQP----- 157
Query: 195 NHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSD 254
P+ A I PI ++P+ +W IKAR T+K ++ ++N +G++FS +LLD D
Sbjct: 158 TRSPLASTHAT--IYPIEYISPFSNKWTIKARCTSKSTIKTWHNRNSEGRLFSVNLLD-D 214
Query: 255 GGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVDL 313
GEIR T FN D Y++ + G VY IS ++ A+K F +L N++EI E + V+
Sbjct: 215 SGEIRATGFNEQCDMLYDVFQEGGVYYISTPCRVQIAKKQFTNLNNDYEITFERGTVVEK 274
Query: 314 CTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILN 372
++ D +P+ +F+F + +++S E ++ +DV+G++ V I+ K+ + +R L
Sbjct: 275 AEDQSD-VPQVRFNFTTVGDLQSVEKDTTIDVVGVLKEVGEISQIVSKSTNKPYDKRELT 333
Query: 373 LKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFP--VLSVKSGKVNDFSGKSIGTIPST 430
L D+SG SV LT+WG ++ P V++ K KV+DF G+S+ + S
Sbjct: 334 LVDSSGFSVRLTVWG----------TTALNFSATPESVIAFKGVKVSDFGGRSLSLLSSG 383
Query: 431 QLFINPDFAEAHELREWFDSGGKNAA--TVSISREIAAGGAKNEIHKTVSQIKNEGLGRS 488
+ I+PD EAH L+ W+D+ G++ + + ++ K + KTV+QI+ E LG S
Sbjct: 384 SMTIDPDIEEAHRLKGWYDAQGRHETFSSHASMSSASSSAGKLDRFKTVAQIREEQLGMS 443
Query: 489 EKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDY 547
++ + + RA + +IK D+ CY AC L G CNKKVT+ +W+C+ C++ +Y
Sbjct: 444 DEAAYFSCRATVIYIKQDTICYPAC-LSQG---CNKKVTELDPGQWRCESCDKTHLRPEY 499
Query: 548 RYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQY 607
RY++ + D TG W++ F E G ++LG A EL ++ + GE+ + +
Sbjct: 500 RYIMLINVSDHTGQLWLSCFDEVGRQLLGISADELMDMRQSESNLA--GEVFQEANCRTW 557
Query: 608 LFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
FR + K + YGD+ R++ V A +NYS E+ L++LI
Sbjct: 558 NFRCRAKLDHYGDQPRIRYQVSSAKAINYSEEASRLMNLI 597
>gi|302421690|ref|XP_003008675.1| replication factor-A protein [Verticillium albo-atrum VaMs.102]
gi|261351821|gb|EEY14249.1| replication factor-A protein [Verticillium albo-atrum VaMs.102]
Length = 609
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 183/577 (31%), Positives = 301/577 (52%), Gaps = 69/577 (11%)
Query: 22 PLVQVMDIKLIGSTQ---ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
P++Q + IK + Q +R+R ++SD + +M+ATQ+N + GQ+ K +V++ Y
Sbjct: 31 PVLQCLQIKPLAGQQGAADRFRIVLSDINNYVQSMMATQVNHVIHDGQLVKNCLVRVTQY 90
Query: 79 ICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYS 136
++V+ + I+++L +E I + E IG+P F LP+ +
Sbjct: 91 QPNSVKGKNILIILGLEVIPELGTPEKIGDPLAFEP-------------LPEG------A 131
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSI-VRSFQPTVQPPYQPPPNFRN 195
APN+G N+G Q + P I RS T +
Sbjct: 132 APNAG-----NTGNAPIQGQNFYGAKKEEEKEKPRISQIPSRSVAGT------------S 174
Query: 196 HGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDG 255
HG + I PI AL+PY +W IKARVT K D+R ++ G+GK+FS +LLD +
Sbjct: 175 HGS-------SNIYPIEALSPYAHKWTIKARVTQKSDIRTWHKPSGEGKLFSVNLLD-ES 226
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATSTVDLC 314
GEI+ T FN D++Y++++ G VY IS + A+K F +L N++E+ E + ++
Sbjct: 227 GEIKATGFNEQCDQYYDLLQEGSVYYISNPCKVGMAKKQFTNLPNDYELTFERDTVIEKA 286
Query: 315 TEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNL 373
E+ ++P+ +++F +I E++S E ++ VDV+G++ V I+ K+ G ++R L L
Sbjct: 287 -EDQTNVPQVRYNFCNIQELQSVEKDATVDVVGVLKDVGEVSQIVSKSTGKPYEKRELTL 345
Query: 374 KDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF 433
D S SV +T+WG K + D V++ K KV+DF G+S+ + S +
Sbjct: 346 VDDSNFSVRITIWG--------KSAQGFDASPESVVAFKGVKVSDFGGRSLSLLSSGTMS 397
Query: 434 INPDFAEAHELREWFDSGGKNAATV---SISREIAAGGAKNEIHKTVSQIKNEGLGRSEK 490
++PD +AH L+ W+DS G+N A S+ + A + + K V Q+K+E LG EK
Sbjct: 398 VDPDIPDAHRLKGWYDSSGRNDAFATHNSMGSGLGAATGRPDEDKVVVQVKDEQLGMGEK 457
Query: 491 PDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRY 549
D+ ++A I +IK D+F Y AC + CNKKV + W+CD+C+ D +YRY
Sbjct: 458 QDFFNLKATIVYIKQDTFAYPAC----RNEGCNKKVVDMNDGTWRCDKCDVSHDRPEYRY 513
Query: 550 LLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLK 586
++ + D T W++ F E G I+G A +L LK
Sbjct: 514 IMSVNVCDHTSQLWLSCFDEVGRSIMGMSADQLMELK 550
>gi|344230771|gb|EGV62656.1| hypothetical protein CANTEDRAFT_115222 [Candida tenuis ATCC 10573]
Length = 591
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 181/630 (28%), Positives = 318/630 (50%), Gaps = 83/630 (13%)
Query: 23 LVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICST 82
+VQV++++ + + R ++ D H +L L D+++ +K SV++++ + C
Sbjct: 30 IVQVINLR---HYEGKSRVILYDGKYNMHGLLDKSLVDKLEGQGFQKTSVIKILAHSC-- 84
Query: 83 VQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGT 142
+ K +++ ++L PK SE+ T +++ Y
Sbjct: 85 FEPEKFYTLIDDAEVVL-------PKYESEAHDT-------------IKIAEY------- 117
Query: 143 FNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKN 202
FN QNP F++ QP P Q G
Sbjct: 118 --------FN-QNP------QENFFKSKKEQP-----QPAAAPSKQSSAADEFQG----- 152
Query: 203 EAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTC 262
RI I +L+PYQ W IKARV+ KGDLR ++NA+G GK+F+ + LD D EIR T
Sbjct: 153 ---QRISSIESLSPYQNNWVIKARVSFKGDLRTWHNAKGSGKLFNVNFLD-DSDEIRATA 208
Query: 263 FNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIP 322
FN + ++ YE ++ G+VY ISK ++ A+ F+ L + +E+ L+ + V+ C + ++P
Sbjct: 209 FNELAEKMYETLQEGKVYYISKARIQAAKPQFSRLSHPYELSLDRDTIVEECFSNNGNVP 268
Query: 323 KQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSGRSV 381
K +F+F +++I+SAE N+++DV+G++ V P+ I K+ G RR +++ D S S+
Sbjct: 269 KLKFNFTKLNQIQSAEPNTVIDVVGVLREVKPAFQITSKSTGKPFDRRDIDIVDDSNFSI 328
Query: 382 ELTLWG----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPD 437
+ LW DF EG V++ K K+ DF G+S+ + + NPD
Sbjct: 329 TVGLWNATAIDFNLSEG------------TVIAFKGCKIQDFGGRSLTLTQTGSILPNPD 376
Query: 438 FAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVR 497
EA++L+ W+D+ G N ++ + A + KT++Q+K E LG E+PD+ +V+
Sbjct: 377 APEAYQLKGWYDNQGSNETFQTLKADNAGSANYIKNRKTIAQVKEENLGAQEQPDFFSVK 436
Query: 498 AFITFIKSDSFCYTAC--PLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQ 554
A I F K+++FCY AC + CN+K+ G+ W+C++C+ E YRY+L
Sbjct: 437 ATINFFKTETFCYPACVNKQEASNNLCNRKIIDQGDGTWRCEKCDINYSEATYRYILNCS 496
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIK 614
I D T W T F + +I G A EL +LK ++ F +++ + ++ FRLK +
Sbjct: 497 IMDATEQLWATLFDQEASKIFGVSANELLVLKE--SNEAEFKKVVEAVTMKEFSFRLKAR 554
Query: 615 EELYGDEQRVKITVIRADQVNYSSESRYLL 644
++ Y E R++ + +++++E +L+
Sbjct: 555 QDSYNGESRIRYQTMAVYDIDFAAECDFLV 584
>gi|241950583|ref|XP_002418014.1| replication factor-A protein 1, putative [Candida dubliniensis
CD36]
gi|223641353|emb|CAX43313.1| replication factor-A protein 1, putative [Candida dubliniensis
CD36]
Length = 623
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 185/652 (28%), Positives = 328/652 (50%), Gaps = 75/652 (11%)
Query: 14 NGGDVNSKPLV-QVMDIKLIG--STQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKG 70
NG D P++ Q+ +IK + + +++R L++D + H ++ N+ +K ++
Sbjct: 18 NGHDSVKIPMILQITNIKAVDLPNDVKKFRILLNDGEYSTHGLIDESCNEYIKNNNCQRY 77
Query: 71 SVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPV 130
++VQ+ + Q + V+ N E + E N N +P
Sbjct: 78 AIVQVNAFSIFATQ-KHFFVIKNFEVLSPTSEKSHN-----------------NFIPVDT 119
Query: 131 RVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQ---PPY 187
N + P L ++ P S + P SF+ V P
Sbjct: 120 YFNEH--PEEAHLTL-------TKKPDSLERESPAPGVTPPLAQSTNSFKSDVGSGVPAQ 170
Query: 188 QPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFS 247
PP GP K + PI ++PYQ W IKARV+ KGDLR ++N++G+GKVF
Sbjct: 171 SKPP-----GPHRK------VSPIETISPYQNNWTIKARVSYKGDLRTWSNSKGEGKVFG 219
Query: 248 FDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEA 307
F+LLD + EI+ + FN ++ ++++E G+VY ISK + A+K FN L + +E+ +
Sbjct: 220 FNLLD-ESDEIKASAFNETAEKAHKLLEEGKVYYISKARVAAARKKFNTLSHPYELTFDK 278
Query: 308 TSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMET 366
+ + C +E D +PK F+F + +I++ E NSI+DV+G + +V P I K+ G
Sbjct: 279 DTEITECFDESD-VPKLNFNFVKLDQIQNLEANSIIDVLGALKTVYPPFQITAKSTGRVF 337
Query: 367 QRRILNLKDTSGRSVELTLWG----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK 422
RR + + D +G VEL LW DF +EG V++VK KV+DF G+
Sbjct: 338 DRRNILVVDETGFGVELGLWNNTATDFDVEEGT------------VVAVKGCKVSDFGGR 385
Query: 423 SIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHK-TVSQIK 481
++ + + NP E+ +L+ W+D+ G + + S+ + GA + ++++
Sbjct: 386 TLSLTQAGSIIPNPGTPESFKLKGWYDNIGIHESFKSLKIDTGGSGADKIAQRISINRAL 445
Query: 482 NEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGD-------RQCNKKVTQSGN--R 532
E G ++KPD+ +++A +TF K ++F Y ACP ++ + CNKK+ Q +
Sbjct: 446 EEHSGSTDKPDYFSIKASVTFCKPENFAYPACPNLVNSADATRPAQTCNKKLVQQDHDGT 505
Query: 533 WQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDD 592
W+C++C +E +RY+L + D TG W+T F + +++LG A EL K E +
Sbjct: 506 WRCEKCAMTYEEPTWRYVLSCSVTDSTGHMWLTLFDDQAKKLLGIDATELIKKKEENPEQ 565
Query: 593 VRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
V +I+ + +F ++ R+K ++E Y DE + + ++++Y+SES++L+
Sbjct: 566 V--NQIMNNTLFKEFSLRVKARQETYNDELKTRYQAAGINELDYASESQFLI 615
>gi|68472689|ref|XP_719663.1| hypothetical protein CaO19.9640 [Candida albicans SC5314]
gi|68472948|ref|XP_719539.1| hypothetical protein CaO19.2093 [Candida albicans SC5314]
gi|46441361|gb|EAL00659.1| hypothetical protein CaO19.2093 [Candida albicans SC5314]
gi|46441490|gb|EAL00787.1| hypothetical protein CaO19.9640 [Candida albicans SC5314]
gi|238881852|gb|EEQ45490.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 624
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 188/656 (28%), Positives = 342/656 (52%), Gaps = 84/656 (12%)
Query: 15 GGDVNSKPLV-QVMDIKLIG---STQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKG 70
G D P++ Q+ +IK S +++R L++D V + H ++ ++ +K ++
Sbjct: 19 GHDSVQIPMILQITNIKAFDVSPSDSKKFRILVNDGVYSTHGLIDESCSEYIKNNNCQRY 78
Query: 71 SVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPV 130
++VQ ++ ++ V+ N E + T++K+ P+N +P
Sbjct: 79 AIVQ-VNAFSIFATSKHFFVIKNFEVLAP----------------TSEKS-PNNIIPIDT 120
Query: 131 RVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPP 190
+ N T ++ S + + ++P P V PP
Sbjct: 121 YFLEHPEENYLTV-MKKSESRDRESP-----------------------VPGVTPPLAQS 156
Query: 191 PN-FRNH--GPILKNEAPA----RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDG 243
N F++ G + PA ++ PI ++PYQ W IKARV+ KGDLR ++N++G+G
Sbjct: 157 TNSFKSEVGGGVAAQSKPAGTHRKVSPIETISPYQNNWTIKARVSYKGDLRTWSNSKGEG 216
Query: 244 KVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI 303
KVF F+LLD + EI+ + FN +R ++++E G+VY ISK + A+K FN L + +E+
Sbjct: 217 KVFGFNLLD-ESDEIKASAFNETAERAHKLLEEGKVYYISKARVAAARKKFNTLSHPYEL 275
Query: 304 FLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN- 362
+ + + C +E D +PK F+F + ++++ E N+I+DV+G + +V P I K+
Sbjct: 276 TFDKDTEITECFDESD-VPKLNFNFVKLDQVQNLEANAIIDVLGALKTVFPPFQITAKST 334
Query: 363 GMETQRRILNLKDTSGRSVELTLWG----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVND 418
G RR + + D +G +EL LW DF +EG V++VK KV+D
Sbjct: 335 GKVFDRRNILVVDETGFGIELGLWNNTATDFNIEEGT------------VVAVKGCKVSD 382
Query: 419 FSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIA-AGGAKNEIHKTV 477
+ G+++ + + NP E+ +L+ W+D+ G + + S+ + A +GG K ++
Sbjct: 383 YDGRTLSLTQAGSIIPNPGTPESFKLKGWYDNIGIHESFKSLKIDNAGSGGDKISQRISI 442
Query: 478 SQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGD-------RQCNKKVTQSG 530
+Q E G +EKPD+ +++A +TF K ++F Y ACP ++ + + CNKK+
Sbjct: 443 NQALEEHSGSTEKPDYFSIKASVTFCKPENFAYPACPNLVQNADATRPAQVCNKKLVFQD 502
Query: 531 N--RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYE 588
N W+C+RC + +E +RY+L + D TG WVT F + E++LG A EL + K E
Sbjct: 503 NDGTWRCERCAKTYEEPTWRYVLSCSVTDSTGHMWVTLFNDQAEKLLGIDATEL-VKKKE 561
Query: 589 LQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
+ +V +I+ + +F ++ R+K K+E Y DE + + + ++++Y+SES++L+
Sbjct: 562 QKSEVA-NQIMNNTLFKEFSLRVKAKQETYNDELKTRYSAAGINELDYASESQFLI 616
>gi|342877980|gb|EGU79393.1| hypothetical protein FOXB_10069 [Fusarium oxysporum Fo5176]
Length = 608
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 196/637 (30%), Positives = 326/637 (51%), Gaps = 72/637 (11%)
Query: 22 PLVQVMDIKLIGSTQE---RYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
P++Q + +K + + + R+R ++SD MLATQ N V ++ +G + ++ Y
Sbjct: 29 PVLQCLQVKQMAPSAQGGDRFRLVMSDGQHYVQTMLATQANHVVHDNKLVRGCIARIKQY 88
Query: 79 ICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAP 138
+ ++ + I+V ILD E I L Q+ I +P V++ A
Sbjct: 89 TPNNLKGKNILV-------ILDIEVI--------ESLGVQEKIG-----EPFAVDSKPAA 128
Query: 139 NSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGP 198
G G F S T +S P +P +
Sbjct: 129 QEGAIA---GGDFYG-----VKKEESKTQPQQFQQQQQQSM------PSRPAMH------ 168
Query: 199 ILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEI 258
A + I PI L+P+ +W IKARVT+K D++ ++ A G+GK+FS +LLD + GEI
Sbjct: 169 -----AGSNIYPIEGLSPFAHKWTIKARVTSKSDIKTWHKATGEGKLFSVNLLD-ESGEI 222
Query: 259 RVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVDLCTEE 317
+ T FN D FY+ ++ G VY IS + A+K F++L N++E+ E + ++ E+
Sbjct: 223 KATGFNDQCDAFYDRLQEGSVYYISTPCRVALAKKQFSNLPNDYELTFERDTVIEK-AED 281
Query: 318 DDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDT 376
++P+ +F+F I E++S E ++ VDVIG++ V I +K+G Q+R L L D
Sbjct: 282 QTNVPQVRFNFCSIQELQSVEKDNTVDVIGVLKEVGEVGDITSKKDGRPFQKRELTLVDD 341
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP 436
+G SV +T+WG N D V++ K KV+DF GKS+ + S + ++P
Sbjct: 342 TGFSVRVTIWGKSANS--------FDAPPESVVAFKGTKVSDFGGKSLSLLSSGTMTVDP 393
Query: 437 DFAEAHELREWFDSGGKNAATVSISREIAAGG---AKNEIHKTVSQIKNEGLGRSEKPDW 493
D +AH L+ W+DS G+N T + + +A+ G + E K +SQ+K+E LG ++ +
Sbjct: 394 DIPDAHRLKGWYDSAGRN-DTFATHQNMASMGNATGRKEDLKIISQVKDENLGMDDQA-Y 451
Query: 494 VTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQ 552
T++A I F+K ++FCY AC L G CNKKVTQ + W C++C ++ +YRY+L
Sbjct: 452 YTIKATIVFVKQENFCYPAC-LSQG---CNKKVTQMPDGTWHCEKCAISHEKPEYRYILS 507
Query: 553 AQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLK 612
+ D T W++ F +SG +I+G A E+ LK DD +F ++ FR +
Sbjct: 508 LNVADHTSHQWLSCFDDSGRQIVGRTADEMMELKE--NDDNKFMAAFEEANCKKFTFRCR 565
Query: 613 IKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
K + +G+ QR++ V+ +++ SE L +LI +
Sbjct: 566 AKMDNFGEAQRIRYQVMTVTPLDFKSEGIKLDELIKQ 602
>gi|315057045|ref|XP_003177897.1| replication factor-A protein 1 [Arthroderma gypseum CBS 118893]
gi|311339743|gb|EFQ98945.1| replication factor-A protein 1 [Arthroderma gypseum CBS 118893]
Length = 598
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 193/642 (30%), Positives = 327/642 (50%), Gaps = 84/642 (13%)
Query: 21 KPLVQVMDIK-LIGSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYI 79
+P++Q + IK ++ Q+RY + SD ML TQLN+ V G +++GS V+L ++
Sbjct: 23 QPILQCLRIKPVVVREQDRYGVVFSDVNHFVRTMLPTQLNNYVTDGILRRGSFVRLTNFQ 82
Query: 80 CSTVQNRKIIVVLNMETI--ILDCEPIGNPKIF---SESELTAQKTIPSNNLPQPVRVNN 134
S V+ + +++++ ++ + + + E IG+PK S E+ Q T S+N
Sbjct: 83 VSVVKGKHLLIIMGLDVLSALGEAERIGDPKPLEPKSGDEMGGQSTTLSSN-------EF 135
Query: 135 YSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFR 194
Y+AP + + PP +F+
Sbjct: 136 YNAPQT----------------------------------------------HNPPQHFQ 149
Query: 195 N-HGPILKNEAP-ARIIPIAALNPY-QGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL 251
N P AP A I I AL+P+ +W IKAR T K +++ + N G+GK+FS +LL
Sbjct: 150 NVQRPRPSGTAPNANIFSIEALSPFANNKWTIKARCTHKSNIKTWKNTFGEGKLFSVNLL 209
Query: 252 DSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATST 310
D D GEIR T F D Y + E G VY IS ++K A+K F+++ N++E+ + +
Sbjct: 210 D-DSGEIRATAFKDQCDLLYPVFEEGAVYYISSPCTVKMAKKEFSNVNNDYELTFDRDTV 268
Query: 311 VDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK-NGMETQRR 369
V+ +++D +P+ +F+F + ++S + + +DV+G++ V+ + + K +G +R
Sbjct: 269 VEKAEDQND-VPQIRFNFTSLGNLQSIDKGTTIDVLGVLKDVDTTSQVTSKTSGKPYDKR 327
Query: 370 ILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPS 429
L L D SG SV LT+WG+ D V++ K KV+DF G+++ + S
Sbjct: 328 ELTLVDNSGFSVRLTVWGNTAT--------TFDTPPESVVAFKGVKVSDFGGRTLSLLSS 379
Query: 430 TQLFINPDFAEAHELREWFDSGGK-NAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRS 488
+ ++PD EAH L+ W+D+ GK N+ T S GG KT+S+I++E + +
Sbjct: 380 GTITVDPDIEEAHRLKGWYDAQGKANSFTAYSSGVTGGGGGSWPTFKTISEIRDEEIPSA 439
Query: 489 EKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQC-NKKVTQS-GNRWQCDRCNQEIDECD 546
+ + ++A + +K D+ CY ACP + C NKKVT+ ++W C+RC +
Sbjct: 440 DSFENFALKATVIHVK-DNLCYPACP----NEACKNKKVTRGDSDQWHCERCERSYANPK 494
Query: 547 YRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQ 606
YRY+L D TG W++ F E+G+ I G A EL +K E DD EI + +
Sbjct: 495 YRYILSLNASDHTGQIWLSCFDEAGQMIFGMTADELMRIKEE--DDAAANEITKGATYCT 552
Query: 607 YLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLIS 648
+ F+ + K + Y ++QR + V A ++YS+E+ L LI+
Sbjct: 553 WNFKCRAKLDTYQEQQRTRYNVYAATPIDYSTEADQLSKLIA 594
>gi|194764875|ref|XP_001964553.1| GF23244 [Drosophila ananassae]
gi|190614825|gb|EDV30349.1| GF23244 [Drosophila ananassae]
Length = 603
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 168/441 (38%), Positives = 245/441 (55%), Gaps = 24/441 (5%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
PI++L+PYQ +W IKARVT+K +R ++NARG+GK+FS DL+D + GEIR T F D+
Sbjct: 168 PISSLSPYQNKWVIKARVTSKTAIRTWSNARGEGKLFSMDLMD-ESGEIRATAFKEQCDK 226
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD-SIPKQQFSF 328
FY++I+V VY SK LKPA K ++ L N +E+ + V LC + DD +IP +++
Sbjct: 227 FYDLIQVDSVYFFSKCQLKPANKQYSQLDNAYEMTFTGETIVQLCEDADDGAIPDIKYNL 286
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTLWG 387
ISE+ EN + VD IGI V + R E ++R L L D S ++ LTLWG
Sbjct: 287 VPISEVSGMENKAAVDTIGICKEVGELQSFVSRTTNKEFKKRDLTLVDMSNSAINLTLWG 346
Query: 388 DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF-INPDFAEAHELRE 446
D +Q PV+ VK ++N+F+G ++ + INPD EAH+LR
Sbjct: 347 DDAVNFDGHVQ--------PVILVKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRG 398
Query: 447 WFDS-GGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKS 505
WFD+ GG N A + +R GG + T + LG +KPD+ +A + +K
Sbjct: 399 WFDNGGGDNIANMVSAR--TGGGNFSTDWMTFKDARERNLGSGDKPDYFQCKAVVHIVKQ 456
Query: 506 DSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWV 564
++ Y ACP CNKKV GN +++C+RCN YR L+ I D T WV
Sbjct: 457 ENAFYRACP----QTDCNKKVVDEGNDQYRCERCNALYPNFKYRLLVNMSIGDWTSNRWV 512
Query: 565 TAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRV-FNQYLFRLKIKEELYGDEQR 623
T F E GE++LG ++E + L++D E I S + F ++F+L+ K E YGD R
Sbjct: 513 TCFNEIGEQLLGHTSQE---VGEALENDAAKAEQIFSSLNFTSHIFKLRCKNESYGDTTR 569
Query: 624 VKITVIRADQVNYSSESRYLL 644
K+TV A +N+ ++YLL
Sbjct: 570 NKLTVQSAAPINHKEYNKYLL 590
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 4 NLTPNSISLINGGDVNSKPLVQVMDIKLIGST--QERYRFLISDS-VSTQHAMLATQLND 60
+L+ I+ I G+ SKP++Q++ IK I S ERYR LISD +AMLA+QLN+
Sbjct: 5 SLSTGVIARIMHGEDVSKPVLQILAIKKINSNADSERYRILISDGKYFNSYAMLASQLNE 64
Query: 61 RVKTGQVKKGSVVQLIDYICSTV 83
GQ+++ ++VQL Y+ S V
Sbjct: 65 MQHKGQLEEFTIVQLDKYVTSMV 87
>gi|224006215|ref|XP_002292068.1| replication protein a [Thalassiosira pseudonana CCMP1335]
gi|220972587|gb|EED90919.1| replication protein a [Thalassiosira pseudonana CCMP1335]
Length = 570
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 195/639 (30%), Positives = 312/639 (48%), Gaps = 88/639 (13%)
Query: 22 PLVQVMDIKLIGST--QERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYI 79
P+VQV+ +K I + ER++ ++SD MLATQLN V + Q+ S++ + D+I
Sbjct: 1 PVVQVIHLKKIDKSGGDERWKVILSDGTLHVSGMLATQLNPLVASSQITTNSILTVKDFI 60
Query: 80 CSTV-QNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAP 138
+T+ +K+ ++LN+E ++ P N + P +
Sbjct: 61 INTMGSGQKVCILLNVEVNGVN---------------------PGNRIGSPQDIQKVGPN 99
Query: 139 NSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGP 198
+ T Q P G +A N GS P
Sbjct: 100 TTATGGAQ---------------PMYGNVQANNNGS----------------------AP 122
Query: 199 ILKNEAPAR-IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGE 257
I++ A + + PI+ LN Y RW I+A+VT K D++ ++NA+G+G +FS LLDS G +
Sbjct: 123 IVRTTADGQPVTPISGLNMYSNRWVIRAKVTNKSDVKTWSNAKGEGSLFSVTLLDSSGYD 182
Query: 258 IRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEE 317
++ T F VD+FY ++E GRVY S G LK A +N+ K+++EI + S + L E
Sbjct: 183 VKCTFFKEAVDKFYNMLEEGRVYTFSGGRLKVANMAYNNCKSQFEITFDQNSEIHLDAEG 242
Query: 318 DDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV-NPSVPILRKNGMETQRRILNLKDT 376
+ ++ + F I+E+E+ E NS VD++ +V V + S + +K+G E + L ++D
Sbjct: 243 AE--IRENYDFVKIAELENMEPNSYVDILAVVKHVGDVSTIVSKKSGKEMTKVDLVVEDD 300
Query: 377 SGRSVELTLWGDFC-NKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI-GTIPSTQLFI 434
SG V+LTLWG+ N E Q PV++ K ++ D+ G+S+ G P+ +
Sbjct: 301 SGADVKLTLWGNSAQNAENQ-------FANCPVVAFKKSRLGDYGGRSLSGGSPT----V 349
Query: 435 NPDFAEAHELREWFDS-GGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDW 493
NP + ++L +W+ S G K+ + S G E K V IK E LG S+KPDW
Sbjct: 350 NPQIPQTNQLMQWWGSNGNKSQSRSLSSSGGGKGPDPLEKRKDVCSIKEEHLGNSDKPDW 409
Query: 494 VTVRAFITFIK-----SDSFCYTACPLMIGD--RQCNKKVTQSGNRWQCDRCNQEIDECD 546
++ +A ITF+K D YTAC G+ R K S + CD+C Q C
Sbjct: 410 LSFKATITFLKREKQGDDGAWYTACA-NSGEPCRNMFKATQTSDGNYHCDKCQQTHPNCV 468
Query: 547 YRYLLQAQIQDQTGLTWVTAFQESGEEIL-GCPAKELYMLKYELQDDVRFGEIIRSRVFN 605
R++ + D T +W++ F E E + G A LY E D + +
Sbjct: 469 RRFIFSGTVADDTSTSWISMFNEQAETLFNGMTADNLYQQSIEQGDKDFYDSTFLKATYT 528
Query: 606 QYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
+++F+ K+K+E+ GDE R+K +V V+Y+ ESR LL
Sbjct: 529 EWVFKCKVKQEMVGDETRIKTSVASLVPVDYAKESRALL 567
>gi|327301885|ref|XP_003235635.1| replication factor A 1 [Trichophyton rubrum CBS 118892]
gi|326462987|gb|EGD88440.1| replication factor A 1 [Trichophyton rubrum CBS 118892]
Length = 598
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 194/646 (30%), Positives = 327/646 (50%), Gaps = 92/646 (14%)
Query: 21 KPLVQVMDIK-LIGSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYI 79
+P++Q + IK ++ Q+RY + SD ML TQLN V G +++GS V+L ++
Sbjct: 23 QPILQCLRIKPVVVREQDRYGVVFSDVNHFVRTMLPTQLNSYVTDGILRRGSFVRLTNFQ 82
Query: 80 CSTVQNRKIIVVLNMETI--ILDCEPIGNPKIF---SESELTAQKTIPSNNLPQPVRVNN 134
S V+ + +++++ +E + + + E IG+PK S E+ Q T S+N
Sbjct: 83 VSVVKGKHLLIIMGLEVLSALGEAERIGDPKPLEPKSGDEMGGQSTTLSSN-------EF 135
Query: 135 YSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFR 194
Y+AP P+ PP +F+
Sbjct: 136 YNAPQ----------------------------------------------PHNPPQHFQ 149
Query: 195 NHGPILKNEAP------ARIIPIAALNPY-QGRWAIKARVTAKGDLRRYNNARGDGKVFS 247
N ++ P A I I AL+P+ +W IKAR T K +++ + N G+GK+FS
Sbjct: 150 N----IQRSRPSGMTSNANIFSIEALSPFANNKWTIKARCTHKSNIKTWKNTFGEGKLFS 205
Query: 248 FDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLE 306
+LLD D GEIR T F D Y I E G VY IS ++K A+K F+++ N++E+ +
Sbjct: 206 VNLLD-DSGEIRATAFKDQCDLLYPIFEEGAVYYISSPCTVKMAKKEFSNVNNDYELTFD 264
Query: 307 ATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GME 365
+ V+ +++D +P+ +F+F + +++S + + +DV+GI+ V+ + + K G
Sbjct: 265 RDTVVEKAEDQND-VPQIRFNFTSLGDLQSIDKGTTIDVLGILKDVDATSQVTSKTTGKP 323
Query: 366 TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIG 425
+R L L D SG SV LT+WG+ D V++ K KV+DF G+++
Sbjct: 324 YDKRELTLVDNSGFSVRLTVWGNTATN--------FDTPPESVVAFKGVKVSDFGGRTLS 375
Query: 426 TIPSTQLFINPDFAEAHELREWFDSGGK-NAATVSISREIAAGGAKNEIHKTVSQIKNEG 484
+ S + ++PD EAH L+ W+D+ GK N+ T S GG KT+S+I++E
Sbjct: 376 LLSSGTVTVDPDIEEAHRLKGWYDAQGKSNSFTAYSSGATGGGGGSWPTFKTISEIRDEE 435
Query: 485 LGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQC-NKKVTQSG-NRWQCDRCNQEI 542
+ ++ + +++A + +K D+ CY ACP + C NKKVT+ ++W C+RC +
Sbjct: 436 IPSADSFESFSLKATVIHVK-DNLCYPACP----NEACKNKKVTRGDLDQWHCERCERSY 490
Query: 543 DECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSR 602
YRY+L D TG W++ F E+G+ I G A EL +K E DD EI +
Sbjct: 491 ANPKYRYILSLNACDHTGQIWLSCFDEAGQMIFGMTADELMKIKEE--DDAAANEITKGA 548
Query: 603 VFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLIS 648
+ + F+ + K + Y ++QR + V A ++Y++E+ L LI+
Sbjct: 549 TYCTWNFKCRAKLDTYQEQQRTRYNVYAATPIDYATEADQLSKLIA 594
>gi|195330772|ref|XP_002032077.1| GM26360 [Drosophila sechellia]
gi|194121020|gb|EDW43063.1| GM26360 [Drosophila sechellia]
Length = 603
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 161/440 (36%), Positives = 247/440 (56%), Gaps = 22/440 (5%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
PI++L+PYQ +W IKARVT+K +R ++NARG+GK+FS DL+D + GEIR T F D+
Sbjct: 168 PISSLSPYQNKWVIKARVTSKSGIRTWSNARGEGKLFSMDLMD-ESGEIRATAFKEQCDK 226
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE-EDDSIPKQQFSF 328
FY++I+V VY ISK LKPA K ++ L N +E+ + V LC + +DD IP+ +++
Sbjct: 227 FYDLIQVDSVYYISKCQLKPANKQYSSLNNAYEMTFSGETVVQLCEDTDDDPIPEIKYNL 286
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVP-ILRKNGMETQRRILNLKDTSGRSVELTLWG 387
IS++ EN + VD IGI V + R E ++R + L D S ++ LTLWG
Sbjct: 287 VPISDVSGMENKAAVDTIGICKEVGELQSFVARTTNKEFKKRDITLVDMSNSAISLTLWG 346
Query: 388 DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF-INPDFAEAHELRE 446
D +Q PV+ VK ++N+F+G ++ + INPD EAH+LR
Sbjct: 347 DDAVNFDGHVQ--------PVILVKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRG 398
Query: 447 WFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSD 506
WFD+GG ++ +S G E T+ + LG +KPD+ +A + +K +
Sbjct: 399 WFDNGGGDSVANMVSARTGGGSFSTE-WMTLKDARARNLGSGDKPDYFQCKAVVHIVKQE 457
Query: 507 SFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVT 565
+ Y ACP CNKKV GN +++C++CN YR L+ I D T WV+
Sbjct: 458 NAFYRACP----QSDCNKKVVDEGNDQFRCEKCNALFPNFKYRLLINMSIGDWTSNRWVS 513
Query: 566 AFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRV-FNQYLFRLKIKEELYGDEQRV 624
+F E GE++LG ++E + L++D E I S + F ++F+L+ K E+YGD R
Sbjct: 514 SFNEVGEQLLGHTSQE---VGEALENDPAKAEQIFSALNFTSHIFKLRCKNEVYGDMTRN 570
Query: 625 KITVIRADQVNYSSESRYLL 644
K+TV +N+ +++LL
Sbjct: 571 KLTVQSVAPINHKEYNKHLL 590
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 13/138 (9%)
Query: 3 VNLTPNSISLINGGDVNSKPLVQVMDIKLIGST--QERYRFLISDS-VSTQHAMLATQLN 59
+L+ I+ I G+V P++Q++ IK I S ERYR LISD +AMLA+QLN
Sbjct: 4 ASLSTGVIARIMHGEVVDAPVLQILAIKKINSAADSERYRILISDGKYFNSYAMLASQLN 63
Query: 60 DRVKTGQVKKGSVVQLIDYICSTV----QNRKIIVVLNMETIILDCE---PIGNPKIF-- 110
G++++ ++VQL Y+ S V ++++++ + + E IG P +
Sbjct: 64 VMQHNGELEEFTIVQLDKYVTSLVGKDGAGKRVLIISELTVVNPGAEVKSKIGEPVTYEN 123
Query: 111 -SESELTAQKTIPSNNLP 127
++ +L + SN+ P
Sbjct: 124 AAKQDLAPKPAATSNSKP 141
>gi|50406267|ref|XP_456619.1| DEHA2A06776p [Debaryomyces hansenii CBS767]
gi|49652283|emb|CAG84575.1| DEHA2A06776p [Debaryomyces hansenii CBS767]
Length = 620
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/451 (33%), Positives = 254/451 (56%), Gaps = 28/451 (6%)
Query: 207 RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV 266
+ I L+PYQ +W IKARV+ KGD+R+++NARG+GK+F+ + LD + EIR T FN +
Sbjct: 175 HVNAIEQLSPYQNQWVIKARVSYKGDIRKWSNARGEGKLFNVNFLD-ESDEIRATAFNDL 233
Query: 267 VDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQF 326
++FY+ +E G+VY ISK ++ A+ F+HL + +E+ L+ + V+ C + D +PK F
Sbjct: 234 AEKFYQELEEGKVYYISKARIQQAKPQFSHLSHPYELALDRDTNVEECFDTTD-VPKIHF 292
Query: 327 SFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSGRSVELTL 385
+F +++IES E NSI+DVIG++ VNP I K+ G RR + + D S ++ + L
Sbjct: 293 NFTKLNQIESCEPNSIIDVIGVLKEVNPVFQITAKSTGKPFDRRNITIVDDSNFAITVGL 352
Query: 386 WG----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEA 441
W DF EG V++ K K+ DF+G+S+ + + NPD AEA
Sbjct: 353 WNNTAVDFDTSEG------------SVIAFKGCKIQDFAGRSLTLTHAGSMMANPDTAEA 400
Query: 442 HELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFIT 501
++L+ WFD+ G N ++ E ++ K++ Q + E LG SEKPD+ ++A +
Sbjct: 401 YQLKGWFDNQGVNENFKTLKNENSSNQNLINNRKSILQAQEENLGMSEKPDFFNIKATVN 460
Query: 502 FIKSDSFCYTAC------PLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQ 554
F K+++FCY AC CN+KV Q W+C++C+ +E YRY+L
Sbjct: 461 FFKTENFCYPACNNSLQSSSQQPSTTCNRKVVEQPDGTWRCEKCDINFNEPHYRYILNCS 520
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVR--FGEIIRSRVFNQYLFRLK 612
+ D +G W+T F + ++ G A EL L+ + ++ F ++I ++ FRLK
Sbjct: 521 VMDSSGQLWMTLFDQEANKLFGKTAGELLTLREQQTNNENNVFQDLINDITMKEFNFRLK 580
Query: 613 IKEELYGDEQRVKITVIRADQVNYSSESRYL 643
+++ Y RV+ + + V++++E +L
Sbjct: 581 ARQDSYNGVVRVRYQAMTINDVDFNAECEHL 611
>gi|296828318|ref|XP_002851311.1| replication factor-A protein 1 [Arthroderma otae CBS 113480]
gi|238838865|gb|EEQ28527.1| replication factor-A protein 1 [Arthroderma otae CBS 113480]
Length = 599
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 192/638 (30%), Positives = 324/638 (50%), Gaps = 75/638 (11%)
Query: 21 KPLVQVMDIKLIG-STQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYI 79
+P++Q + IK + QER+ + SD V+ ML TQLN+ V G +++GS V+L ++
Sbjct: 23 QPILQCLRIKPVTVREQERFGVVFSDVVNFVRTMLPTQLNNYVTEGLLRRGSFVRLTNFQ 82
Query: 80 CSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSA 137
S V+ + +++++ +E + + + E IG+PK P+
Sbjct: 83 VSVVKGKHLLIIMGLEVLSALGEAERIGDPK--------------------PLE------ 116
Query: 138 PNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHG 197
P SG S T +S + AP A + + FQ +P R G
Sbjct: 117 PKSGDDMGGQSTTLSSNE----------FYNAPQAQNPPQHFQNVQRP--------RTTG 158
Query: 198 PILKNEAPARIIPIAALNPY-QGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGG 256
A I I AL+P+ +W IKAR T K D++ + N G+GK+FS +LLD D G
Sbjct: 159 MTTN----ANIFSIEALSPFANNKWTIKARCTHKSDIKTWKNTYGEGKLFSVNLLD-DSG 213
Query: 257 EIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
EIR T F D Y + E G VY IS ++K A+K ++++ N++E+ + + V+
Sbjct: 214 EIRATAFKDQCDLLYPVFEEGSVYYISSPCTVKMAKKEYSNVNNDYELTFDRDTVVEKAE 273
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLK 374
+++D +P+ +F+F + ++S E + +DV+GI+ V+ + + K G +R L L
Sbjct: 274 DQND-VPQVRFNFTGLGNLQSIEKGTTIDVLGILKEVDTTSQVTSKTTGKPYDKRELTLV 332
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
D SG SV LT+WG+ D V++ K KV+DF G+++ + S + +
Sbjct: 333 DNSGFSVRLTVWGNTAT--------TFDTPPESVVAFKGVKVSDFGGRTLSLLSSGSITV 384
Query: 435 NPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNE--IHKTVSQIKNEGLGRSEKPD 492
+PD EAH L+ W+D+ GK+ + S E +GG KT+S+I++E + +E P+
Sbjct: 385 DPDIEEAHRLKGWYDAQGKSNFFTAYSSEGGSGGGGGSWPTFKTISEIRDEQVPTAENPE 444
Query: 493 WVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN--RWQCDRCNQEIDECDYRYL 550
++A + +K D+ CY ACP + C K G+ +W C+RC + YRY+
Sbjct: 445 NFALKATVIHVK-DNLCYPACP----NEACKNKKMTGGDLEQWHCERCERSYANPKYRYI 499
Query: 551 LQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFR 610
L D TG W++ F E+G+ I G A +L +K + D+V EI + + + F+
Sbjct: 500 LSLNASDHTGQIWLSCFDEAGQAIFGMTADKLMRIKED--DEVAANEITKGATYCTWNFK 557
Query: 611 LKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLIS 648
+ K + Y ++QR + V A ++YS+E+ L LI+
Sbjct: 558 CRAKLDTYQEQQRTRYNVYAATPIDYSTEADQLSKLIA 595
>gi|195572613|ref|XP_002104290.1| GD20882 [Drosophila simulans]
gi|194200217|gb|EDX13793.1| GD20882 [Drosophila simulans]
Length = 603
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 161/440 (36%), Positives = 247/440 (56%), Gaps = 22/440 (5%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
PI++L+PYQ +W IKARVT+K +R ++NARG+GK+FS DL+D + GEIR T F D+
Sbjct: 168 PISSLSPYQNKWVIKARVTSKSGIRTWSNARGEGKLFSMDLMD-ESGEIRATAFKEQCDK 226
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE-EDDSIPKQQFSF 328
FY++I+V VY ISK LKPA K ++ L N +E+ + V LC + +DD IP+ +++
Sbjct: 227 FYDLIQVDSVYYISKCQLKPANKQYSSLNNAYEMTFSGETVVQLCEDTDDDPIPEIKYNL 286
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVP-ILRKNGMETQRRILNLKDTSGRSVELTLWG 387
IS++ EN + VD IGI V + R E ++R + L D S ++ LTLWG
Sbjct: 287 VPISDVSGMENKAAVDTIGICKEVGELQSFVARTTNKEFKKRDITLVDMSNSAISLTLWG 346
Query: 388 DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF-INPDFAEAHELRE 446
D +Q PV+ VK ++N+F+G ++ + INPD EAH+LR
Sbjct: 347 DDAVNFDGHVQ--------PVILVKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRG 398
Query: 447 WFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSD 506
WFD+GG ++ +S G E T+ + LG +KPD+ +A + +K +
Sbjct: 399 WFDNGGGDSVANMVSARTGGGSFSTE-WMTLKDARARNLGSGDKPDYFQCKAVVHIVKQE 457
Query: 507 SFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVT 565
+ Y ACP CNKKV GN +++C++CN YR L+ I D T WV+
Sbjct: 458 NAFYRACP----QSDCNKKVIDEGNDQFRCEKCNALFPNFKYRLLINMSIGDWTSNRWVS 513
Query: 566 AFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRV-FNQYLFRLKIKEELYGDEQRV 624
+F E GE++LG ++E + L++D E I S + F ++F+L+ K E+YGD R
Sbjct: 514 SFNEVGEQLLGHTSQE---VGEALENDPAKAEQIFSALNFTSHIFKLRCKNEVYGDMTRN 570
Query: 625 KITVIRADQVNYSSESRYLL 644
K+TV +N+ +++LL
Sbjct: 571 KLTVQSVAPINHKEYNKHLL 590
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 13/138 (9%)
Query: 3 VNLTPNSISLINGGDVNSKPLVQVMDIKLIGST--QERYRFLISDS-VSTQHAMLATQLN 59
+L+ I+ I G+V P++Q++ IK I S ERYR LISD +AMLA+QLN
Sbjct: 4 ASLSTGVIARIMHGEVVDAPVLQILAIKKINSAADSERYRILISDGKYFNSYAMLASQLN 63
Query: 60 DRVKTGQVKKGSVVQLIDYICSTV----QNRKIIVVLNMETIILDCE---PIGNPKIF-- 110
G++++ ++VQL Y+ S V ++++++ + + E IG P +
Sbjct: 64 VMQHNGELEEFTIVQLDKYVTSLVGKDGAGKRVLIISELTVVNPGAEVKSKIGEPVTYEN 123
Query: 111 -SESELTAQKTIPSNNLP 127
++ +L + SN+ P
Sbjct: 124 AAKQDLAPKPAATSNSKP 141
>gi|326474770|gb|EGD98779.1| replication protein A DNA-binding subunit [Trichophyton tonsurans
CBS 112818]
Length = 598
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 193/646 (29%), Positives = 326/646 (50%), Gaps = 92/646 (14%)
Query: 21 KPLVQVMDIK-LIGSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYI 79
+P++Q + IK ++ Q+RY + SD ML TQLN V G +++GS V+L ++
Sbjct: 23 QPILQCLRIKPVVVREQDRYGVVFSDVNHFVRTMLPTQLNSYVTDGILRRGSFVRLTNFQ 82
Query: 80 CSTVQNRKIIVVLNMETI--ILDCEPIGNPKIF---SESELTAQKTIPSNNLPQPVRVNN 134
S V+ + +++++ +E + + + E IG+PK S E+ Q T S+N
Sbjct: 83 VSVVKGKHLLIIMGLEVLSALGEAERIGDPKPLEPKSGDEMGGQSTTLSSN-------EF 135
Query: 135 YSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFR 194
Y+AP + + PP F+
Sbjct: 136 YNAPQT----------------------------------------------HNPPQQFQ 149
Query: 195 NHGPILKNEAP------ARIIPIAALNPY-QGRWAIKARVTAKGDLRRYNNARGDGKVFS 247
N ++ P A I I AL+P+ +W IKAR T K +++ + N G+GK+FS
Sbjct: 150 N----IQRSRPSGMTSNANIFSIEALSPFANNKWTIKARCTHKSNIKTWKNTFGEGKLFS 205
Query: 248 FDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLE 306
+LLD D GEIR T F D Y I E G VY IS ++K A+K F+++ N++E+ +
Sbjct: 206 VNLLD-DSGEIRATAFKDQCDLLYPIFEEGAVYYISSPCTVKMAKKEFSNVNNDYELTFD 264
Query: 307 ATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GME 365
+ V+ +++D +P+ +F+F + ++S + + +DV+GI+ V+ + + K G
Sbjct: 265 RDTVVEKAEDQND-VPQIRFNFTSLGNLQSIDKGTTIDVLGILKDVDATSQVTSKTTGKP 323
Query: 366 TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIG 425
+R L L D SG SV LT+WG+ D V++ K KV+DF G+++
Sbjct: 324 YDKRELTLVDNSGFSVRLTVWGNTATN--------FDTPPESVVAFKGVKVSDFGGRTLS 375
Query: 426 TIPSTQLFINPDFAEAHELREWFDSGGK-NAATVSISREIAAGGAKNEIHKTVSQIKNEG 484
+ S + ++PD EAH L+ W+D+ GK N+ T S GG KT+S+I++E
Sbjct: 376 LLSSGTVTVDPDIEEAHRLKGWYDAQGKSNSFTAYSSDTTGGGGGSWPTFKTISEIRDEE 435
Query: 485 LGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQC-NKKVTQSG-NRWQCDRCNQEI 542
+ ++ + +++A + +K D+ CY ACP + C NKKVT+ ++W C+RC +
Sbjct: 436 IPSADSFESFSLKATVIHVK-DNLCYPACP----NEACKNKKVTRGDLDQWHCERCERSY 490
Query: 543 DECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSR 602
YRY+L D TG W++ F E+G+ I G A EL +K + DD EI +
Sbjct: 491 ANPKYRYILSLNACDHTGQIWLSCFDEAGQMIFGMTADELMKIKED--DDAAANEITKGA 548
Query: 603 VFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLIS 648
+ + F+ + K + Y ++QR + VI A ++Y++E+ L LI+
Sbjct: 549 TYCTWNFKCRAKLDTYQEQQRTRYNVIAATPIDYATEADQLSKLIA 594
>gi|322799305|gb|EFZ20693.1| hypothetical protein SINV_03263 [Solenopsis invicta]
Length = 588
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 205/659 (31%), Positives = 332/659 (50%), Gaps = 103/659 (15%)
Query: 12 LINGGDVNSKPLVQVMDIKLI-----GSTQERYRFLISDSVS-TQHAMLATQLNDRVKTG 65
++ G D++ KP++Q++ K + G+T +RYR L+SD MLATQLN+ ++
Sbjct: 3 IMKGIDID-KPILQMLGYKKLPKNKDGAT-DRYRLLVSDGEKLNSFTMLATQLNNLIEDD 60
Query: 66 QVKKGSVVQLIDYICSTVQN----RKIIVVLNMETIILDCE---PIGNPKIFSESELTAQ 118
+ + S+ ++ +Y S+V N ++++++L++E ++ + IGNP + EL ++
Sbjct: 61 ILNEFSICKITNYHLSSVNNSGKEKRVMLILDIEVVVSGEKVGGRIGNP---TNIELKSE 117
Query: 119 KTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRS 178
PS + VR N GS T NS A S + +
Sbjct: 118 PDTPSTSTTTTVRHQN----------------------GSTRTGNSN-----QASSDIHT 150
Query: 179 FQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNN 238
PY Q RW IKARV K ++ ++N
Sbjct: 151 TPIAALSPY------------------------------QNRWVIKARVINKSPIKTWSN 180
Query: 239 ARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLK 298
+RG+GK+FS DL+D + GEIR T F VVD+FY++I G +Y IS+ LK A K FN +K
Sbjct: 181 SRGEGKLFSMDLID-ESGEIRCTAFRDVVDKFYDLIVTGNIYYISRCVLKAANKQFNTMK 239
Query: 299 NEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI 358
N++E+ + + + + C + + IP QF+F IS++ES E N ++DV+G+V +V I
Sbjct: 240 NDYEMTMNSDTEIVPCHDSSNDIPTLQFNFSPISQVESKEKNDLLDVLGVVTTVGDVQHI 299
Query: 359 L-RKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVN 417
R G E +R +++ D SG V +TLWG + G ++++K +V
Sbjct: 300 TARTTGRELIKRDISIVDDSGTMVTVTLWGTQAEEFGASNN--------TIIAIKGARVG 351
Query: 418 DFS-GKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAK--NEIH 474
+F+ GK++ + S+ + +PD EAH LR W+ + G + S+SR GG+ N
Sbjct: 352 EFNGGKNLSLVMSSIIEKDPDIPEAHRLRGWYTAVGHSETAKSLSR---VGGSTDFNGPL 408
Query: 475 KTVSQIKNEGLG-RSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKK-VTQSGNR 532
T + + LG + PD T A I I++++ Y ACP+ C KK + Q
Sbjct: 409 YTFQEATDARLGEKMNLPDSFTAVATIKQIRTENSLYRACPV----ESCKKKLIDQDNGI 464
Query: 533 WQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDD 592
++C++CN+E YR L ++ D TG W+TAF E E+ILG A+EL LK +D
Sbjct: 465 FRCEKCNKEYPNFTYRLLASMELADATGSRWITAFNEEAEKILGMSAQELGELKENDKDA 524
Query: 593 V--RFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+FGE F ++F LK + E++ DE R+K A +NY + +L+D +SK
Sbjct: 525 YLQKFGEA----TFKTFMFNLKARSEVFQDEMRIKHVCTSAGPINYKTYLPHLIDKVSK 579
>gi|195499032|ref|XP_002096775.1| GE24866 [Drosophila yakuba]
gi|194182876|gb|EDW96487.1| GE24866 [Drosophila yakuba]
Length = 603
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 160/440 (36%), Positives = 246/440 (55%), Gaps = 22/440 (5%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
PI++L+PYQ +W IKARVT+K +R ++NARG+GK+FS DL+D + GEIR T F D+
Sbjct: 168 PISSLSPYQNKWVIKARVTSKSGIRTWSNARGEGKLFSMDLMD-ESGEIRATAFKEQCDK 226
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE-EDDSIPKQQFSF 328
FY++I+V VY ISK LKPA K ++ L N +E+ + V LC + +DD IP+ +++
Sbjct: 227 FYDLIQVDSVYYISKCQLKPANKQYSSLNNAYEMTFSGETVVQLCEDTDDDPIPEIKYNL 286
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVP-ILRKNGMETQRRILNLKDTSGRSVELTLWG 387
IS++ EN + VD IGI V + R E ++R + L D S ++ LTLWG
Sbjct: 287 IPISDVSGMENKAAVDTIGICKEVGELQSFVARTTNKEFKKREITLVDMSNSAISLTLWG 346
Query: 388 DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF-INPDFAEAHELRE 446
D +Q PV+ VK ++N+F+G ++ + INPD EAH+LR
Sbjct: 347 DEAVNFDGHVQ--------PVILVKGSRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRG 398
Query: 447 WFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSD 506
WFD+GG + +S G E T+ + LG +KPD+ +A + +K +
Sbjct: 399 WFDNGGGDNVANMVSARTGGGNFSTE-WMTLKDARTRNLGSGDKPDYFQCKAVVHIVKQE 457
Query: 507 SFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVT 565
+ Y ACP CNKKV GN +++C++CN YR L+ I D T WV+
Sbjct: 458 NAFYRACP----QSDCNKKVVDEGNDQFRCEKCNALFPNFKYRLLINMSIGDWTSNRWVS 513
Query: 566 AFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRV-FNQYLFRLKIKEELYGDEQRV 624
+F E GE++LG ++E + L++D E I S + F ++F+L+ K E++GD R
Sbjct: 514 SFNEVGEQLLGHSSQE---VGEALENDPAKAEQIFSALNFTSHIFKLRCKNEVFGDMTRN 570
Query: 625 KITVIRADQVNYSSESRYLL 644
K+TV +N+ +++LL
Sbjct: 571 KLTVQSVAPINHKEYNKHLL 590
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 13/138 (9%)
Query: 3 VNLTPNSISLINGGDVNSKPLVQVMDIKLIGST--QERYRFLISDS-VSTQHAMLATQLN 59
+L+ I+ I G+V P++Q++ IK I S ERYR LISD +AMLA+QLN
Sbjct: 4 ASLSTGVIARIMHGEVVDGPVLQILAIKKINSAADSERYRILISDGKYFNSYAMLASQLN 63
Query: 60 DRVKTGQVKKGSVVQLIDYICSTV----QNRKIIVVLNMETIILDCE---PIGNPKIF-- 110
G++++ ++VQL Y+ S V ++++++ + + E IG P +
Sbjct: 64 VMQHNGELEEFTIVQLDKYVTSLVGKDGAGKRVLIISELTVVNPGAEVKSKIGEPVTYEN 123
Query: 111 -SESELTAQKTIPSNNLP 127
++ +L + PSN+ P
Sbjct: 124 AAKQDLAPKAAAPSNSKP 141
>gi|322783307|gb|EFZ10882.1| hypothetical protein SINV_05412 [Solenopsis invicta]
Length = 587
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 203/648 (31%), Positives = 327/648 (50%), Gaps = 98/648 (15%)
Query: 21 KPLVQVMDIKLI-----GSTQERYRFLISDSVS-TQHAMLATQLNDRVKTGQVKKGSVVQ 74
KP++Q++ K + G+T +RYR L+SD MLATQLN+ ++ + + S+ +
Sbjct: 8 KPILQMLGYKKLPKNKDGAT-DRYRLLVSDGEKLNSFTMLATQLNNLIENDILNEFSICK 66
Query: 75 LIDYICSTVQN----RKIIVVLNMETIILDCE---PIGNPKIFSESELTAQKTIPSNNLP 127
+ +Y S+V N + ++++L++E I+ E IGNP + EL +++ PS +
Sbjct: 67 ITNYCLSSVNNNGKEKCVMLILDIEVIVSGEEVGRRIGNP---TNIELKSEQDTPSTSTT 123
Query: 128 QPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPY 187
V N GS T NS +A S +R+ Q
Sbjct: 124 TTVHHQN----------------------GSTRTGNSN-----HASSDIRTTQ------- 149
Query: 188 QPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFS 247
IAAL+PYQ RW IKARV K ++ ++N+RG+GK FS
Sbjct: 150 -----------------------IAALSPYQNRWVIKARVINKSPIKTWSNSRGEGKFFS 186
Query: 248 FDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEA 307
DL+D GEIR T F +VD+FY++I G VY IS+ +LK A K +N +KN++E+ + +
Sbjct: 187 MDLIDK-SGEIRCTAFKEMVDKFYDLIVAGNVYYISRCTLKMANKQYNTMKNDYEMSVTS 245
Query: 308 TSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMET 366
+ + C + + IP Q++F IS++ES E N ++DV+G+V ++ R G E
Sbjct: 246 DTGIVPCHDNSNDIPTLQYNFSPISQVESKEKNDLLDVLGVVTTIGDVQHFTARATGREL 305
Query: 367 QRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG-KSIG 425
+R +++ D SG V +TLW + E D ++++K V +F+G K++
Sbjct: 306 IKRDISIVDDSGTMVTVTLW--------RTQAEEFDASNNTIIAIKRASVGEFNGRKNLS 357
Query: 426 TIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAK--NEIHKTVSQIKNE 483
S+ + +PD EAH LR W+ + G + S+SR GG+ N T + +
Sbjct: 358 LTMSSIIEKDPDIPEAHRLRGWYTAVGHSETAKSLSR---VGGSTDFNGPLYTFQEATDA 414
Query: 484 GLG-RSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKK-VTQSGNRWQCDRCNQE 541
LG + PD TV A I IK+++ Y ACP+ C KK + Q ++C++CN+E
Sbjct: 415 RLGEKMNLPDSFTVVATIKQIKTENSLYRACPV----ENCKKKLIDQDNGIFRCEKCNKE 470
Query: 542 IDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRS 601
YR L ++ D TG W+TAF E E+ILG A+EL LK +D + + I
Sbjct: 471 YPNFTYRLLANMELADATGSRWITAFNEEAEKILGMSAQELGELKENDKD--AYLQKIGE 528
Query: 602 RVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
F ++F L+ + E++ D R+K +NY + +L+D +SK
Sbjct: 529 ATFKTFMFNLEARSEVFQDAMRIKHVCTSVRPINYKTYLPHLIDKVSK 576
>gi|213408425|ref|XP_002174983.1| replication factor-A protein [Schizosaccharomyces japonicus yFS275]
gi|212003030|gb|EEB08690.1| replication factor-A protein [Schizosaccharomyces japonicus yFS275]
Length = 608
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 146/450 (32%), Positives = 250/450 (55%), Gaps = 27/450 (6%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I PI L+PYQ +W I+ARVT K +++ ++N RG+GK+FS +LLD + GEIR T FN V
Sbjct: 179 IYPIEGLSPYQNKWTIRARVTNKSEIKHWHNQRGEGKLFSVNLLD-ESGEIRATGFNEQV 237
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D FY+I++ G+VY ISK + A+K F++++NE+E+ E + + +E+ +++P +F+
Sbjct: 238 DAFYDILQEGQVYFISKCRVNIAKKQFSNVQNEYELMFERDTEIK-KSEDQNAVPMARFN 296
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTLW 386
F + E+ ++I+DVIG++ ++ P I R +R + + D SG + +T+W
Sbjct: 297 FVTLEEVGKVAKDAIIDVIGVLQNIGPVQQITSRATSRGFDKRDITIVDQSGFEMRMTVW 356
Query: 387 G----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAH 442
G DF E +++ K KVNDF G+S+ + S+ + +PD EAH
Sbjct: 357 GKQAIDFSVPEE------------SIIAFKGVKVNDFQGRSLSMLNSSTMTTDPDIPEAH 404
Query: 443 ELREWFDSGGKNAATVSISREIAAGGAKNEI--HKTVSQIKNEGLGRSEKPDWVTVRAFI 500
L+ W+D G+ + S G N KTV++++ + LG SE PD+ +++A +
Sbjct: 405 TLKGWYDGQGRAQDFMKHSSAATVGSGTNRTAERKTVAEVQAQHLGMSETPDYFSLKATV 464
Query: 501 TFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTG 560
+I+ + Y ACP CNKKV G W C++CN++ + YRY++ D TG
Sbjct: 465 VYIRKKNISYPACPT----PDCNKKVFDQGGSWHCEKCNKDYEAPHYRYIMTIAAGDHTG 520
Query: 561 LTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGD 620
W+ F + G ++G A EL + + D+ F ++ + Y+F + K++ +
Sbjct: 521 QLWLNVFDDVGRILMGKTADELNAM--QENDENEFTSVMSDASYVPYVFECRAKQDNFKG 578
Query: 621 EQRVKITVIRADQVNYSSESRYLLDLISKS 650
E RV+ T + +++ ES+ L+DLI +
Sbjct: 579 EVRVRYTAMSVRNIDWKQESKRLVDLIKSA 608
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Query: 20 SKPLVQVMDIKLIGS-----TQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQ 74
+ P++QV+ +K + S +RYR + SDS + +ML+TQLN V ++ KG+ VQ
Sbjct: 24 ANPVLQVLTVKELNSNPTSGAPKRYRVVFSDSQNYAQSMLSTQLNHLVMENKLVKGAFVQ 83
Query: 75 LIDYICSTVQNRKIIVVLNMETI--ILDCEPIGNP 107
L + + ++ RKI++VL + + + E IGNP
Sbjct: 84 LTQFTVNVMKERKILIVLGLNVLPELGISEKIGNP 118
>gi|150863697|ref|XP_001382257.2| DNA replication factor A [Scheffersomyces stipitis CBS 6054]
gi|149384953|gb|ABN64228.2| DNA replication factor A [Scheffersomyces stipitis CBS 6054]
Length = 616
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 157/456 (34%), Positives = 267/456 (58%), Gaps = 30/456 (6%)
Query: 201 KNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRV 260
+N +I PI L+PYQ W IKARV+ KGDLR + NA+G+GK+ S + LD + EI+
Sbjct: 169 RNGFQGKITPIETLSPYQNNWTIKARVSYKGDLRTWTNAKGEGKLISVNFLD-ESDEIKA 227
Query: 261 TCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDS 320
+ F V ++++E G+VY ISK ++ + K FN L + +E+ ++ + ++ C + D+
Sbjct: 228 SAFQDVAISAHKLLEEGKVYYISKAKVQASNKKFNTLSHPYELVMDRDTKIEECFDVDN- 286
Query: 321 IPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSGR 379
+PK F+F +++I + + N+I+DV+G + VN I K+ G E RR + + D +G
Sbjct: 287 VPKMHFNFIKLNQIPNLDPNAIIDVLGALKIVNEPYKITAKSTGKEFDRRNVTIVDETGF 346
Query: 380 SVELTLWG----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFIN 435
++++ LW +F EG +++ KS +V DF+G+S+ + + N
Sbjct: 347 AIDVGLWNNTATEFSIPEGS------------IIAFKSCRVQDFNGRSLTLTQTGSMLPN 394
Query: 436 PDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLG-RSEK-PDW 493
P+ E++ L+ W+D+ G NA ++ E + G K KT++Q ++E LG RSEK PD+
Sbjct: 395 PNTPESYSLKGWYDNQGVNANFNNLKVESSGGETKIGDRKTIAQAQDESLGLRSEKEPDY 454
Query: 494 VTVRAFITFIKSD-SFCYTACP--LMIGDRQ--CNKK-VTQSGNRWQCDRCNQEIDECDY 547
TV+A I+FIK+D +FCY AC + +R+ CNKK V Q N W+C++C++ + Y
Sbjct: 455 FTVKASISFIKTDPNFCYPACTNEVQYNNRKSACNKKLVEQHDNSWRCEKCDKNYAQPTY 514
Query: 548 RYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQY 607
RY+L I D+T WVT F+ +ILG A EL L+ D F + I+ + F ++
Sbjct: 515 RYILTCSIMDETNQIWVTLFEREALKILGKDANELIALQ---DDSAAFKDYIQEKCFQEH 571
Query: 608 LFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYL 643
+FR++ K++ Y D+ RV+ + ++Y++E+ +L
Sbjct: 572 VFRIRAKQDTYNDQVRVRYQCVALYDIDYNAEAIHL 607
>gi|297271569|ref|XP_002800290.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Macaca mulatta]
Length = 532
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 177/516 (34%), Positives = 287/516 (55%), Gaps = 56/516 (10%)
Query: 33 GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQN-RKIIV 90
G++ RYR L+SD ++T + MLATQLN V+ ++ + Q+ +I +T+++ R++++
Sbjct: 64 GNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEQERLSSNCICQIHRFIVNTLKDGRRVVI 123
Query: 91 VLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGT 150
++ +E ++ E +G V++ N N G Q +
Sbjct: 124 LMELE-VLKSAEAVG------------------------VKIGNPVPYNEGHGQPQAAPP 158
Query: 151 FNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNF-RNHGPILKNEA---PA 206
++ +P + S P + AGS TV Y F + GP L N + +
Sbjct: 159 ASAGSPAASSKPQQ-QHGSSGAGS-------TVSKAYGASKTFGKAGGPSLSNTSGGTQS 210
Query: 207 RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV 266
+++PIA+L PYQ +W I ARVT K +R ++N+RG+GK+FS +L+D + GEIR T FN
Sbjct: 211 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVD-ESGEIRATAFNEQ 269
Query: 267 VDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQF 326
VD+F+ +IEV +VY SKG+LK A K F +KN++E+ ++V C E+D +P QF
Sbjct: 270 VDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPC-EDDRHLPTVQF 328
Query: 327 SFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELTL 385
F I ++ES +S+VD+IGI S + I +R N E +R + L DTSG+ V TL
Sbjct: 329 DFTGIDDLESKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATL 388
Query: 386 WGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELR 445
WG+ +K D PVL++K +V+DF G+S+ + S+ + NPD EA++LR
Sbjct: 389 WGEDADK--------FDGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLR 440
Query: 446 EWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIK 504
WFD+ G+ VSIS + G G N KT+ ++K+E LG+ +KPD+ + A + +++
Sbjct: 441 GWFDAEGQALDGVSISDLKSGGVGGGNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLR 500
Query: 505 SDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCN 539
++ Y ACP + CNKKV Q ++C++C+
Sbjct: 501 KENCMYQACPT----QDCNKKVIDQQNGLYRCEKCD 532
>gi|430814436|emb|CCJ28324.1| unnamed protein product [Pneumocystis jirovecii]
Length = 513
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/467 (32%), Positives = 268/467 (57%), Gaps = 32/467 (6%)
Query: 196 HGPILKNE-----------APARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGK 244
H PIL+N+ + A I PI +L+PYQ RW IKARVT+K +++ ++N +G+GK
Sbjct: 63 HMPILQNQKEEINNRISSVSSATIYPIESLSPYQNRWTIKARVTSKTEIKHWHNQKGEGK 122
Query: 245 VFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIF 304
+FS +D + GEIR T FN VD Y++++ G+VY ISK + A+K F++++NE+E+
Sbjct: 123 LFSCVFMD-ESGEIRATAFNDQVDMLYDVLQEGQVYFISKCRVNIAKKQFSNVQNEYELT 181
Query: 305 LEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGM 364
E + V+ C ++ ++P+ +F+F + ++++ E +SI+DVIGI+ V+ SV I +
Sbjct: 182 FERDTEVEKCPDQ-STVPQAKFNFVFLKDLDNVEKDSIIDVIGILKEVHESVEITSRTTQ 240
Query: 365 E--TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK 422
+ +R + + D+S SV LTLWG K ++ V++ K KV++F+G+
Sbjct: 241 KFVYSKRDIFIVDSSNYSVRLTLWG--------KHALDFNIPQETVVAFKGLKVSEFNGR 292
Query: 423 SIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKN 482
S+ + S + NP EA+ L++W+D GK + + + A + E KT++QIK+
Sbjct: 293 SLSLLNSGMVIANPQIEEAYSLKKWYDKQGKEESFATHQSIVTA--IRKEERKTIAQIKD 350
Query: 483 EGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQE 541
E LG +E+PD+ +++A I F K ++ Y ACP CNKKV + W+C++C++
Sbjct: 351 EQLGMAEQPDYFSIKATIVFFKQENAFYPACPTA----GCNKKVIEDNEGGWRCEKCDKS 406
Query: 542 IDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRS 601
YRY+L + D TG W++ F + G I+G A ++ ++ E + I
Sbjct: 407 FPAPQYRYILTISVNDHTGQIWLSCFDDVGRLIIGKSADDIVQMREENEQAAL--NIFHE 464
Query: 602 RVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLIS 648
Y+FR++ K++ Y RV+ V+ A +N++ E + L ++I+
Sbjct: 465 ANCKSYVFRVRAKQDSYNGAVRVRYQVMSASFINWAHECKLLTEIIN 511
>gi|115398417|ref|XP_001214800.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192991|gb|EAU34691.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 588
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 191/623 (30%), Positives = 321/623 (51%), Gaps = 79/623 (12%)
Query: 21 KPLVQVMDIKLI---GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLID 77
+P+VQ + IK + + QERYR + SD + MLATQ N V +G +++G V+L
Sbjct: 27 EPIVQCVQIKPLPPQQNNQERYRAVFSDISNYVQTMLATQANPFVTSGLLRRGCFVKLKS 86
Query: 78 YICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNY 135
+ ++V+ +KI+++L++E + + + E IG PK +K PQP +++
Sbjct: 87 FQANSVKGKKILIILDLEVLQELGEAEKIGEPKPLESKAEDEEK-------PQPTTISS- 138
Query: 136 SAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRN 195
+G + S+ G+ + T RAP +PP P
Sbjct: 139 ------------NGFYGSKTQGAQA---QTTNRAP------------ARPPVAP------ 165
Query: 196 HGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDG 255
A + PI A++PY +W IKAR T+K +++ + N + GK+FS +LLD D
Sbjct: 166 --------GHATMYPIEAISPYCHKWTIKARCTSKTNIKTWQNTKSTGKLFSVNLLD-DS 216
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVDLC 314
GEIR T FN D Y++ + G VY IS ++ A+K F +L N++E+ E + V+
Sbjct: 217 GEIRATGFNEQCDALYDLFQEGGVYYISTPCRVQIAKKQFTNLNNDYELTFERDTVVEKA 276
Query: 315 TEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMET-QRRILNL 373
++ D +P+ +F+F I +++S E ++ +DVIG++ I+ K + +R L L
Sbjct: 277 EDQSD-VPQVRFNFTTIGDLQSVEKDTTIDVIGVLKEAGECSQIVSKTTSKPYNKRELTL 335
Query: 374 KDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFP--VLSVKSGKVNDFSGKSIGTIPSTQ 431
D +G SV LT+WG +D P V++ K KV+DF G+S+ + S
Sbjct: 336 VDNTGFSVRLTIWG----------ATAMDFNVSPEAVVAFKGVKVSDFGGRSLSLLSSGS 385
Query: 432 LFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGA--KNEIHKTVSQIKNEGLGRSE 489
+ ++PD EAH L+ W+D+ G++ S + +A + K + KT+ Q+K E LG SE
Sbjct: 386 MTVDPDIEEAHRLKGWYDAQGRDENFTSHASLSSATTSTMKADSFKTIGQVKEEQLGMSE 445
Query: 490 KPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYR 548
+ +++A + +IK ++ Y AC L G CNKKVT+ +W C+RC + +YR
Sbjct: 446 DAAYFSLKATVIYIKQENVYYPAC-LSEG---CNKKVTELDPGQWHCERCEKTYPHPEYR 501
Query: 549 YLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYL 608
Y++ + D TG W++ F E G ++G A EL L+ D+ GEI ++ +
Sbjct: 502 YIMLINVSDHTGQLWLSCFDEVGRLMMGTSANELSALRE--NDEKAAGEIFQNANCRTWN 559
Query: 609 FRLKIKEELYGDEQRVKITVIRA 631
FR + K + + +QR++ V A
Sbjct: 560 FRCRAKTDHFDGQQRIRYQVSSA 582
>gi|198452404|ref|XP_001358758.2| GA21928 [Drosophila pseudoobscura pseudoobscura]
gi|198131919|gb|EAL27901.2| GA21928 [Drosophila pseudoobscura pseudoobscura]
Length = 603
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 162/441 (36%), Positives = 245/441 (55%), Gaps = 24/441 (5%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
PI++L+PYQ +W IKARVT+K +R ++N RG+GK+FS DL+D + GEIR T F D+
Sbjct: 167 PISSLSPYQNKWVIKARVTSKTGIRTWSNPRGEGKLFSMDLMD-ESGEIRATAFKEQCDK 225
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD-SIPKQQFSF 328
++++I+V VY SK LKPA K F+ L N +E+ + V LC + DD +IP +++
Sbjct: 226 YFDMIQVDSVYFFSKCQLKPANKQFSQLNNAYEMTFTGETAVQLCEDADDGAIPDIKYNL 285
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTLWG 387
ISE+ EN + VD IGI V R E ++R L L D S ++ LTLWG
Sbjct: 286 VPISEVSGMENKAAVDTIGICKEVGELQAFTSRTTNKEFKKRDLTLVDMSNSAISLTLWG 345
Query: 388 DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF-INPDFAEAHELRE 446
D +Q PV+ VK ++N+F+G ++ + INPD EAH+LR
Sbjct: 346 DDAVNFDGHVQ--------PVILVKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRG 397
Query: 447 WFDS-GGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKS 505
WFD+ GG N A + +R GG+ + T+ + LG +KPD+ +A + +K
Sbjct: 398 WFDNGGGDNVANMVSAR--TGGGSFSTDWMTLKDARARNLGSGDKPDYFQCKAVVHIVKQ 455
Query: 506 DSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWV 564
++ Y ACP CNKKV GN +++C+RCN YR L+ + D T WV
Sbjct: 456 ENAFYRACP----QADCNKKVVDEGNDQYRCERCNALYPNFKYRLLVNMSVGDWTSNRWV 511
Query: 565 TAFQESGEEILGCPAKELYMLKYELQDD-VRFGEIIRSRVFNQYLFRLKIKEELYGDEQR 623
T F E+GE++L ++E + L++D + EI + F ++F+L+ K E+YGD R
Sbjct: 512 TCFNETGEQLLKHTSQE---IGEALENDPTKAEEIFSALNFTSHIFKLRCKNEVYGDMTR 568
Query: 624 VKITVIRADQVNYSSESRYLL 644
K+TV +N+ +R+LL
Sbjct: 569 NKLTVQSVGPLNHKEYNRHLL 589
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLIGSTQ--ERYRFLISDS-VSTQHAMLATQLNDR 61
L+ I+ I GD KP++Q++ IK I S ERYR LISD +AMLA+QLN+
Sbjct: 6 LSSGVIARIMNGDDVVKPVLQILAIKKINSNADAERYRILISDGKYFNSYAMLASQLNEM 65
Query: 62 VKTGQVKKGSVVQLIDYICSTV----QNRKIIVVLNMETIILDC-----EPIGNPKIFSE 112
GQ+ + ++VQL Y+ S V ++++++ E +L+ E IG P +
Sbjct: 66 QHKGQLDEFTIVQLDKYVTSMVGKDGAGKRVLII--SELTVLNAGAEVKEKIGEPVTYEN 123
Query: 113 S 113
+
Sbjct: 124 A 124
>gi|195145076|ref|XP_002013522.1| GL24182 [Drosophila persimilis]
gi|194102465|gb|EDW24508.1| GL24182 [Drosophila persimilis]
Length = 603
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 162/441 (36%), Positives = 245/441 (55%), Gaps = 24/441 (5%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
PI++L+PYQ +W IKARVT+K +R ++N RG+GK+FS DL+D + GEIR T F D+
Sbjct: 167 PISSLSPYQNKWVIKARVTSKTGIRTWSNPRGEGKLFSMDLMD-ESGEIRATAFKEQCDK 225
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD-SIPKQQFSF 328
++++I+V VY SK LKPA K F+ L N +E+ + V LC + DD +IP +++
Sbjct: 226 YFDMIQVDSVYFFSKCQLKPANKQFSQLNNAYEMTFTGETAVQLCEDADDGAIPDIKYNL 285
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTLWG 387
ISE+ EN + VD IGI V R E ++R L L D S ++ LTLWG
Sbjct: 286 VPISEVSGMENKAAVDTIGICKEVGELQAFTSRTTNKEFKKRDLTLVDMSNSAISLTLWG 345
Query: 388 DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF-INPDFAEAHELRE 446
D +Q PV+ VK ++N+F+G ++ + INPD EAH+LR
Sbjct: 346 DDAVNFDGHVQ--------PVILVKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRG 397
Query: 447 WFDS-GGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKS 505
WFD+ GG N A + +R GG+ + T+ + LG +KPD+ +A + +K
Sbjct: 398 WFDNGGGDNVANMVSAR--TGGGSFSTDWMTLKDARARNLGSGDKPDYFQCKAVVHIVKQ 455
Query: 506 DSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWV 564
++ Y ACP CNKKV GN +++C+RCN YR L+ + D T WV
Sbjct: 456 ENAFYRACP----QADCNKKVVDEGNDQYRCERCNALYPNFKYRLLVNMSVGDWTSNRWV 511
Query: 565 TAFQESGEEILGCPAKELYMLKYELQDD-VRFGEIIRSRVFNQYLFRLKIKEELYGDEQR 623
T F E+GE++L ++E + L++D + EI + F ++F+L+ K E+YGD R
Sbjct: 512 TCFNETGEQLLKHTSQE---IGEALENDPTKAEEIFSALNFTSHIFKLRCKNEVYGDMTR 568
Query: 624 VKITVIRADQVNYSSESRYLL 644
K+TV +N+ +R+LL
Sbjct: 569 NKLTVQSVGPLNHKEYNRHLL 589
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 14/123 (11%)
Query: 3 VNLTPNSISLINGGDVNSKPLVQVMDIKLIGSTQ--ERYRFLISDS-VSTQHAMLATQLN 59
+L+ I+ I GD KP++Q++ IK I S ERYR LISD +AMLA+QLN
Sbjct: 4 ASLSSGVIARIMNGDDVVKPVLQILAIKKINSNADAERYRILISDGKYFNSYAMLASQLN 63
Query: 60 DRVKTGQVKKGSVVQLIDYICSTV----QNRKIIVVLNMETIILDC-----EPIGNPKIF 110
+ GQ+ + ++VQL Y+ S V ++++++ E +L+ E IG P +
Sbjct: 64 EMQHKGQLDEFTIVQLDKYVTSMVGKDGAGKRVLII--SELTVLNAGAEVKEKIGEPVTY 121
Query: 111 SES 113
+
Sbjct: 122 ENA 124
>gi|358334004|dbj|GAA32083.2| replication factor A1 [Clonorchis sinensis]
Length = 551
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 188/616 (30%), Positives = 308/616 (50%), Gaps = 100/616 (16%)
Query: 53 MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSE 112
MLATQLN ++ G + +VV++ Y+ I+LD E +G
Sbjct: 1 MLATQLNHLIENGNLVNDTVVRIKKYVL----------------IVLDVELLG------- 37
Query: 113 SELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNL----QNSGTFNSQNPGSFSTPNSGTFR 168
Q S N+ P V +A + + ++G F +P + TP SG
Sbjct: 38 ----VQHDTVSENVSAPSAVKPPAAMTPTSTPVTPPKSSTGPFPGGHPSTPGTPGSGM-- 91
Query: 169 APNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVT 228
++ PI +LNPYQ RW ++ARV+
Sbjct: 92 -------------------------------------PKVFPIQSLNPYQNRWTVRARVS 114
Query: 229 AKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLK 288
K +R +N DGK+F+F L+D + GEIRVT FNA VD+F+++IEV + Y +++ +LK
Sbjct: 115 QKSSIRTWNKQGRDGKLFNFTLVD-ESGEIRVTAFNAEVDKFFDMIEVNKAYYVTRANLK 173
Query: 289 PAQKNFNHLKNEWEIFLEATSTVDLCTEED-DSIPKQQFSFRHISEIESAENNSIVDVIG 347
A K FN N++E+ L A S + C +ED ++P+ F+F I ++++ E S VDV+G
Sbjct: 174 AANKQFNTTNNDYEMTLNADSQIIPCEDEDITALPETHFNFVSIGKLDTCEPGSFVDVVG 233
Query: 348 IVISVNPSVPILRKNGM-ETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFF 406
+V + I+ K E ++R L L D+S V LTLWGD D
Sbjct: 234 VVHDTSEVQTIMAKASQRELRKRELGLVDSSRCLVRLTLWGDEAAS--------FDGSQH 285
Query: 407 PVLSVKSGKVNDFSGKSIGTIPSTQLFINP-DFAEAHELREWFDSGGKNAATVSISREIA 465
PV+ VK KV+DF+G+S+ ++ + ++P + EA L+ W++ G + + E+
Sbjct: 286 PVIVVKGAKVSDFNGRSLSVSSTSSVLVSPTNVPEAIRLKGWYELEGHKVSFDTYKSEML 345
Query: 466 AGGAKNEIH------------KTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTAC 513
G+ ++ + +K G+G K D+ T ++ + F+K ++F Y AC
Sbjct: 346 GSGSGGDLAGPGSTAGCLGGWNLIQDVKASGVGTHAKADFFTCKSTVVFLKKENFMYQAC 405
Query: 514 PLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGE 572
P CNKKV +G+ ++C++C +E + C +R LL A+I D TG W+T FQE+ E
Sbjct: 406 PT----EGCNKKVIDTGHGMYRCEKCGRETNHCKWRLLLAAKIADLTGDLWITCFQEAAE 461
Query: 573 EILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRAD 632
++LG A L +K E QD+ + I + VFN ++FRL+ K + Y DE+R+++ V+
Sbjct: 462 QLLGQSADSLGAMK-ESQDEAQLERIFLNAVFNSWVFRLRAKVDRYNDEERLRVVVVEVR 520
Query: 633 QVNYSSESRYLLDLIS 648
+++ +R LL I+
Sbjct: 521 PLDHVDHARRLLKAIT 536
>gi|190345993|gb|EDK37976.2| hypothetical protein PGUG_02074 [Meyerozyma guilliermondii ATCC
6260]
Length = 469
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 150/452 (33%), Positives = 257/452 (56%), Gaps = 34/452 (7%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
PI +L+PYQ W IKARV+ KGD+R+++NARG+GK+F+ + LD + EIR T FN V ++
Sbjct: 26 PIESLSPYQNNWRIKARVSFKGDIRKWSNARGEGKLFNVNFLD-ESDEIRATAFNDVAEQ 84
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFR 329
FY +E G+VY + + ++ A+ F+HL + +E+ L+ + + C + D +PK F+F
Sbjct: 85 FYNTLEEGKVYTVERARIQQAKPQFSHLTHPYELALDKDTVITECFDTSD-VPKLHFNFT 143
Query: 330 HISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSGRSVELTLWG- 387
+ +I++AE N++VDVIG++ + NP I K+ G RR + + D S ++++ LW
Sbjct: 144 KLDKIQAAEVNAVVDVIGVLKTANPVFQITAKSTGKAFDRRNITIVDDSNFAIDIGLWNQ 203
Query: 388 ---DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHEL 444
+F EG V++ K KV DF G+S+ S + +NPD EA++L
Sbjct: 204 TALEFNTSEGS------------VIAFKGCKVQDFGGRSLTLTHSGSMVVNPDTPEAYQL 251
Query: 445 REWFDSGGKNAATVSISREIAAGGAKNEI--HKTVSQIKNEGLGRSEKPDWVTVRAFITF 502
+ W+D+ G N S+ ++ AG +N I KT+ + + LG EKPD+ +V+A I++
Sbjct: 252 KGWYDNQGMNENFKSL--KVEAGPNQNYIKNRKTILAAQEDNLGMHEKPDFFSVKATISY 309
Query: 503 IKSDSFCYTACPLMI-GDRQ--------CNKKVTQSGNRWQCDRCNQEIDECDYRYLLQA 553
K+D+F Y AC + G+ Q CN+KV + + W+C++CN + E +RY+L
Sbjct: 310 FKTDNFSYPACSNTVPGNSQAPGQQENTCNRKVLEQSDGWRCEKCNITLPEPLHRYILNC 369
Query: 554 QIQDQTGLTWVTAFQESGEEILGCPAKELYML--KYELQDDVRFGEIIRSRVFNQYLFRL 611
I D+TG W T F + ++ G A +L L K ++ + F +++ S ++ FRL
Sbjct: 370 SITDETGQLWTTLFDQEARKLFGMSAGDLINLKEKQDMNESNEFADLMESITMKEFNFRL 429
Query: 612 KIKEELYGDEQRVKITVIRADQVNYSSESRYL 643
+ +++ Y R++ + V++ +E L
Sbjct: 430 RARQDSYNGNVRIRYQTMSLFDVDFVAECDEL 461
>gi|146420901|ref|XP_001486403.1| hypothetical protein PGUG_02074 [Meyerozyma guilliermondii ATCC
6260]
Length = 469
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/452 (33%), Positives = 256/452 (56%), Gaps = 34/452 (7%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
PI L+PYQ W IKARV+ KGD+R+++NARG+GK+F+ + LD + EIR T FN V ++
Sbjct: 26 PIELLSPYQNNWRIKARVSFKGDIRKWSNARGEGKLFNVNFLD-ESDEIRATAFNDVAEQ 84
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFR 329
FY +E G+VY + + ++ A+ F+HL + +E+ L+ + + C + D +PK F+F
Sbjct: 85 FYNTLEEGKVYTVERARIQQAKPQFSHLTHPYELALDKDTVITECFDTSD-VPKLHFNFT 143
Query: 330 HISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSGRSVELTLWG- 387
+ +I++AE N++VDVIG++ + NP I K+ G RR + + D S ++++ LW
Sbjct: 144 KLDKIQAAEVNAVVDVIGVLKTANPVFQITAKSTGKAFDRRNITIVDDSNFAIDIGLWNQ 203
Query: 388 ---DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHEL 444
+F EG V++ K KV DF G+S+ S + +NPD EA++L
Sbjct: 204 TALEFNTSEGS------------VIAFKGCKVQDFGGRSLTLTHSGSMVVNPDTPEAYQL 251
Query: 445 REWFDSGGKNAATVSISREIAAGGAKNEI--HKTVSQIKNEGLGRSEKPDWVTVRAFITF 502
+ W+D+ G N S+ ++ AG +N I KT+ + + LG EKPD+ +V+A I++
Sbjct: 252 KGWYDNQGMNENFKSL--KVEAGPNQNYIKNRKTILAAQEDNLGMHEKPDFFSVKATISY 309
Query: 503 IKSDSFCYTACPLMI-GDRQ--------CNKKVTQSGNRWQCDRCNQEIDECDYRYLLQA 553
K+D+F Y AC + G+ Q CN+KV + + W+C++CN + E +RY+L
Sbjct: 310 FKTDNFSYPACSNTVPGNSQAPGQQENTCNRKVLEQSDGWRCEKCNITLPEPLHRYILNC 369
Query: 554 QIQDQTGLTWVTAFQESGEEILGCPAKELYML--KYELQDDVRFGEIIRSRVFNQYLFRL 611
I D+TG W T F + ++ G A +L L K ++ + F +++ S ++ FRL
Sbjct: 370 SITDETGQLWTTLFDQEARKLFGMSAGDLINLKEKQDMNESNEFADLMESITMKEFNFRL 429
Query: 612 KIKEELYGDEQRVKITVIRADQVNYSSESRYL 643
+ +++ Y R++ + V++ +E L
Sbjct: 430 RARQDSYNGNVRIRYQTMSLFDVDFVAECDEL 461
>gi|225557692|gb|EEH05977.1| replication factor [Ajellomyces capsulatus G186AR]
Length = 606
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/445 (37%), Positives = 257/445 (57%), Gaps = 21/445 (4%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I PI AL+PY +W IKAR T K ++ ++N G+GK+FS +LLD D GEIR T F
Sbjct: 172 IYPIEALSPYSHKWTIKARCTNKSAIKTWHNKNGEGKLFSVNLLD-DSGEIRATAFKDQC 230
Query: 268 DRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQF 326
D Y + E G VY IS ++ A+K FN+L NE+E+ E + V+ E++D +P+ +F
Sbjct: 231 DSLYGVFEEGCVYYISSPCRVQMAKKAFNNLNNEYELTFEKDTIVEKAEEQND-VPQIRF 289
Query: 327 SFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILNLKDTSGRSVELTL 385
+F +I+ ++S E + +DVIG++ V IL K + +R L L D +G SV LT+
Sbjct: 290 NFTNIANLQSVEAGTTIDVIGVLKDVGELSQILSKTTSKPYDKRDLTLVDNTGYSVRLTV 349
Query: 386 WGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELR 445
WG+ KE + E V++ K KV+DF+G+S+ + S + ++PD +AH+L+
Sbjct: 350 WGNIA-KEFDSVPE-------SVVAFKGVKVSDFNGRSLSLLSSGSMTVDPDIEDAHKLK 401
Query: 446 EWFDSGGKNAATVSI-SREIAAG-GAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFI 503
W+D+ G++ S S AAG G + KT+ Q+ LG SEKPD+ +V+A + ++
Sbjct: 402 GWYDAQGRSETFASHDSMNNAAGFGDRASSFKTIVQVHEGNLGMSEKPDYFSVKATVVYV 461
Query: 504 KSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLT 562
K D+ Y AC + D+ CNKKV Q N +W+C+RC+Q +YRY+L + D TG
Sbjct: 462 KQDTMAYPAC---LTDK-CNKKVLQDENGQWRCERCDQSFPHPEYRYILSVNVCDHTGAL 517
Query: 563 WVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQ 622
W++ F E G+ ILG A EL LK D+ + E+++ + F + K + + D+Q
Sbjct: 518 WLSCFDEVGKIILGTSANELMELKE--NDERAYEELVQRANCRAWNFNCRAKMDNFQDQQ 575
Query: 623 RVKITVIRADQVNYSSESRYLLDLI 647
RV+ V ++YS ES L +LI
Sbjct: 576 RVRYQVSSVSAIDYSVESARLAELI 600
>gi|298710029|emb|CBJ31747.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 419
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/429 (35%), Positives = 241/429 (56%), Gaps = 24/429 (5%)
Query: 233 LRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQK 292
+R++NNARG G +FS DLLD DG EI+ T F D++++I++ G+VY + G +K A K
Sbjct: 1 MRQWNNARGSGTLFSVDLLDEDGSEIKGTFFKQDADKWFQILQEGQVYAFTGGKVKVANK 60
Query: 293 NFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV 352
F+ E+E+ ++++ ++ + D I ++F ++E+E+ E N ++DVI +V SV
Sbjct: 61 KFSSFNAEYELTFDSSTQINPIND-DSRIGSATYAFVKLNEMEALEANKVLDVIAVVKSV 119
Query: 353 NPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVK 412
+ + G + +R L L D + + LTLWGD +G + + PV++ K
Sbjct: 120 EDHAQFVSRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGSRWEGN------PVVAFK 173
Query: 413 SGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSIS-----REIAAG 467
K++DFSG+S+ ++ ++ L +PD E +LR WFD+ G ++ S++ +
Sbjct: 174 GVKLSDFSGRSLNSLNASTLVNDPDVPETADLRAWFDAAGGGSSFKSVTVRNGGGGGSDD 233
Query: 468 GAKNEIHK--TVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSF---CYTACPLMIGDRQC 522
AK +I + T+ I + LG EKPDW V+A I+FIK D YTACP C
Sbjct: 234 AAKKDISQRYTLQSITDGNLGNGEKPDWAVVKATISFIKLDGERLPWYTACP----KEGC 289
Query: 523 NKKVTQS-GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGC-PAK 580
NKKVT++ WQC++CNQ EC RY+L QI D TG WVTAF + G E+L A
Sbjct: 290 NKKVTETMEGAWQCEKCNQTHPECQRRYMLSMQISDNTGKAWVTAFNDQGVELLDNRTAD 349
Query: 581 ELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSES 640
EL+ +K E +D E+ F Y+ L++K ++Y DE R + T+ R V+ +E
Sbjct: 350 ELFQMKEE-GNDAELEELFSEACFKTYMLTLRVKTDMYNDETRSRKTLQRLAPVDVKAEC 408
Query: 641 RYLLDLISK 649
LLD I+K
Sbjct: 409 AALLDAIAK 417
>gi|440637381|gb|ELR07300.1| hypothetical protein GMDG_02480 [Geomyces destructans 20631-21]
Length = 608
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 194/636 (30%), Positives = 329/636 (51%), Gaps = 74/636 (11%)
Query: 22 PLVQVMDIKLI---GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
P+ Q + IK + G+ ERYR ++SD+ + +MLAT N + ++KKGS+V+L +
Sbjct: 32 PVCQCVQIKPLASQGNGAERYRVVLSDTKNFVQSMLATGANHFIHDQKLKKGSLVRLKQF 91
Query: 79 ICSTVQNRKIIVVLNMETIILDCEP--IGNPKIFSESELTAQKTIPSNNLPQPVRVNNYS 136
+ ++ ++I+V+++++ + EP IG+P+ A K +P
Sbjct: 92 QANALKGKRILVIMDIDVLAEFGEPDKIGDPQ--------ALKVKDEEEDVKPA------ 137
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNH 196
PG+ S G+ +P QP Q P+
Sbjct: 138 -------------------PGAVS------------GAGFYGNKPAQQPAQQSLPS--RT 164
Query: 197 GPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGG 256
GP + I PI L+PY +W IKARV+ K ++R ++ G+GK+FS +LLD + G
Sbjct: 165 GPS-SSAGQGNIYPIETLSPYAHKWTIKARVSNKSEIRTWHKQSGEGKLFSVNLLD-ESG 222
Query: 257 EIRVTCFNAVVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
EI+ T FN D+ Y++ + G VY IS ++ A+K F +L N++E+ + + V+
Sbjct: 223 EIKATGFNEQCDQLYDLFQEGSVYYISSPCRVQLAKKQFTNLPNDYELTFDRETKVEKA- 281
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMET-QRRILNLK 374
E+ +++P+ +F+F I+ +++ E ++ +DVIG++ V I+ K+ + +R L L
Sbjct: 282 EDQENVPQVRFNFTDIASLQTVEKDTTIDVIGVLKEVADVTQIVSKSTSKPYDKRELTLV 341
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
D S SV LT+WG K D +++ K KV+DF G+S+ + S + +
Sbjct: 342 DDSDFSVRLTIWG--------KTAVSFDAQPESIVAFKGAKVSDFGGRSLSLLSSGSMTV 393
Query: 435 NPDFAEAHELREWFDSGGKNA--ATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPD 492
+PD EAH+LR W+D+ G++ A+ S A G + + TV+++ + LG SE D
Sbjct: 394 DPDIQEAHKLRGWYDTHGRSNTFASHSGMASAGAAGGRQDPVMTVAKVYEDSLGMSESTD 453
Query: 493 WVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLL 551
+ + +A I +IK ++F Y AC L G CNKKVT G+ W+C++C+ + +YRY++
Sbjct: 454 YFSTKATIVYIKQENFAYPAC-LSEG---CNKKVTDMGDGTWRCEKCDITHPKPEYRYIM 509
Query: 552 QAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRL 611
+ D TG W++ F + G I+G A +L LK +D G LF+
Sbjct: 510 SLNVNDHTGQLWLSCFDDVGRLIMGMSADQLMALKDS--EDPAAGRAFEEANCKTMLFKC 567
Query: 612 KIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
+ K + + D+QRV+ V A VNYS E++ L +LI
Sbjct: 568 RAKMDSFQDQQRVRYQVTAASPVNYSQEAQKLAELI 603
>gi|154295413|ref|XP_001548142.1| hypothetical protein BC1G_13185 [Botryotinia fuckeliana B05.10]
Length = 595
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 203/617 (32%), Positives = 322/617 (52%), Gaps = 82/617 (13%)
Query: 37 ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMET 96
ER+R ++SD + MLATQ N + G++ KG ++L +Y + V+ ++I+++L+++
Sbjct: 49 ERFRLVVSDIQNFVQCMLATQANHVIHDGKLTKGCFIRLKNYQANEVKGKRILIILDIDV 108
Query: 97 I--ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQ 154
I + E IG P TA K + + V+ N S SG +
Sbjct: 109 IESLGTMEKIGEP--------TAVK------VEEDVKPTNTSIAGSGFY----------- 143
Query: 155 NPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAAL 214
G+ + QP Q P N GP + + A I PI +L
Sbjct: 144 ------------------GNKPQPQQPAAQDRALPSRN----GP-SSSSSHATIYPIESL 180
Query: 215 NPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEII 274
+PY +W IKARVT+K D+R ++ +GK+FS +LLD + GEI+ T FN D YE
Sbjct: 181 SPYAHKWTIKARVTSKSDIRTWSKPNSEGKLFSVNLLD-ESGEIKATGFNEQCDALYETF 239
Query: 275 EVGRVYLI-SKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISE 333
+ G VY I S ++ A+K F+++ N++E+ E + V+ E+ D++P+ +++F +I +
Sbjct: 240 QEGSVYYITSPCRVQIAKKQFSNINNDYELMFERDTLVEK-AEDQDNVPQVRYNFSNIGD 298
Query: 334 IESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILNLKDTSGRSVELTLWGDFCNK 392
++S E +S VD+I ++ V I K + +R L L D +G SV LT+WG
Sbjct: 299 LQSIEKDSTVDLIAVLKEVGEISEITSKTTSKPYSKRELTLVDETGYSVRLTIWG----- 353
Query: 393 EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGG 452
K D V++ K KV+DF G+S+ + S + +PD EAH+L+ G
Sbjct: 354 ---KTATSFDASPESVVAFKGVKVSDFGGRSLSLLSSGSMSFDPDIQEAHKLK------G 404
Query: 453 KNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEK-PDWVTVRAFITFIKSDSFCYT 511
N A+ AAGG ++ I KT++Q+K+EGLG SE+ D+ + RA I +IK D+FCY
Sbjct: 405 CNLASAG-----AAGGRQDPI-KTIAQVKDEGLGMSEENTDYFSSRATIVYIKQDNFCYP 458
Query: 512 ACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQES 570
AC + CNKKV Q+ W+C++CNQ + +YRY+L + D TG W+TAF E
Sbjct: 459 ACL----NENCNKKVVDQNDGTWRCEKCNQSHPKPEYRYILALNVNDHTGQMWLTAFDEV 514
Query: 571 GEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIR 630
G I+G A EL LK D + F+++ K + Y D+ RV+ +V+
Sbjct: 515 GRLIMGKSADELMELKE--NDPPAMERVFEDANCKMMTFKVRCKTDTYQDQARVRYSVMS 572
Query: 631 ADQVNYSSESRYLLDLI 647
A VNY++++ L +LI
Sbjct: 573 ALAVNYAADALKLAELI 589
>gi|156048933|ref|XP_001590433.1| hypothetical protein SS1G_08173 [Sclerotinia sclerotiorum 1980]
gi|154692572|gb|EDN92310.1| hypothetical protein SS1G_08173 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 609
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 192/617 (31%), Positives = 318/617 (51%), Gaps = 68/617 (11%)
Query: 37 ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMET 96
ER+R ++SD + MLATQ N + G++ KG ++L +Y + V+ ++I+++L+++
Sbjct: 49 ERFRLVVSDVQNFVQCMLATQANHVIHDGKLTKGCFIRLKNYQANEVKGKRILIILDIDV 108
Query: 97 IILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNP 156
I E +G + E P V+V P++ T G F P
Sbjct: 109 I----ESLGTMEKIGE--------------PTAVKVEVDVKPHNTTIG---GGGFYGNKP 147
Query: 157 GSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNP 216
+ QP Q P + + + A I PI +L+P
Sbjct: 148 --------------------QPQQPAAQDRALPSRS-----GPSNSSSHATIYPIESLSP 182
Query: 217 YQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEV 276
Y +W IKARVT+K D+R ++ +GK+FS +LLD + GEI+ T FN D YE+ +
Sbjct: 183 YAHKWTIKARVTSKSDIRTWHKQNSEGKLFSVNLLD-ESGEIKATGFNEQCDALYELFQE 241
Query: 277 GRVYLI-SKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
G VY I S ++ A+K F+++ N++E+ E + V+ E+ D++P+ +++F +I +++
Sbjct: 242 GNVYYITSPCRVQIAKKQFSNINNDYELMFERDTLVEKA-EDQDNVPQVRYNFSNIGDLQ 300
Query: 336 SAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILNLKDTSGRSVELTLWGDFCNKEG 394
+ E +S VD+I ++ V + I+ K + +R L L D +G SV LT+WG
Sbjct: 301 TIEKDSTVDLIAVLKEVGETSEIMSKTTNKPYSKRELTLVDDTGYSVRLTVWG------- 353
Query: 395 QKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGK- 453
K D +++ K KV+DF G+S+ + S + +PD EAH L+ W+DS G+
Sbjct: 354 -KTATSFDASPESIVAFKGVKVSDFGGRSLSLLSSGSMSFDPDIQEAHRLKGWYDSQGRT 412
Query: 454 -NAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEK-PDWVTVRAFITFIKSDSFCYT 511
N A+ S A G + + KTV+QIK+EGLG SE+ D+ + RA I +IK ++FCY
Sbjct: 413 ENFASHSNMASAGAAGGRQDPLKTVAQIKDEGLGMSEENTDYFSTRATIVYIKQETFCYP 472
Query: 512 ACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQES 570
+C + C+KKV + + W+C++CNQ + +YRY+L + D TG W+TAF E
Sbjct: 473 SCI----NENCSKKVVEENDGTWRCEKCNQTHPKPEYRYILSLNVNDHTGQLWLTAFDEV 528
Query: 571 GEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIR 630
G I+G A E+ LK D + F+ + K + + ++ RV+ V
Sbjct: 529 GRLIMGMSADEMMELKE--NDQSALEKAFDDANCKMMTFKCRAKTDNFKEQARVRYQVNS 586
Query: 631 ADQVNYSSESRYLLDLI 647
A VNY +++ L +LI
Sbjct: 587 ASAVNYGADALKLAELI 603
>gi|345494357|ref|XP_003427279.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Nasonia vitripennis]
Length = 584
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 151/414 (36%), Positives = 237/414 (57%), Gaps = 26/414 (6%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
PIAAL+PYQ RW IK RVT K +R ++N+RG+GK+FS DLLD + GEIR T F D+
Sbjct: 173 PIAALSPYQNRWVIKVRVTNKSPIRTWSNSRGEGKLFSIDLLD-ESGEIRCTAFRDQCDK 231
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFR 329
FY++IE+G+VY IS+ LKPA K FN+LKN++E+ L + S + +C EE++ IP QF F
Sbjct: 232 FYDMIEIGKVYYISRCQLKPANKQFNNLKNDYEMTLTSDSEIAICNEENEGIPTLQFDFV 291
Query: 330 HISEIESAENNSIVDVIGIVISVNP-SVPILRKNGMETQRRILNLKDTSGRSVELTLWG- 387
I+ +E+ + ++DV+GIV + + R G E ++R + + D + + +TLWG
Sbjct: 292 PINTVEAKSKDELIDVLGIVKTCSDIQTLTARTTGRELKKRDIGIVDENNDLITVTLWGT 351
Query: 388 ---DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFS-GKSIGTIPSTQLFINPDFAEAHE 443
DF D PV+++K K+ +F+ GK++ + S+ L ++PD +AH
Sbjct: 352 QAIDF------------DGSTNPVIAIKGAKIGEFNGGKNLSLVASSMLQVDPDIPQAHR 399
Query: 444 LREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFI 503
LR WF + G + S+SR + GG N T ++++ G + P+ +A + I
Sbjct: 400 LRGWFKTVGATEESRSLSRTLGGGGNLNGPWLTFKEVEDNRFGHQDMPNMFIAKATVNLI 459
Query: 504 KSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLT 562
++++ Y +CP C KKV QS ++C++C+++ YR L + D TG
Sbjct: 460 RAENALYKSCP----SEGCKKKVIDQSNGMYKCEKCSRDYPNFTYRLLASTNLVDWTGNQ 515
Query: 563 WVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEE 616
W TAF E E +L A+EL LK +D + E I + F Y+F+L+I+ E
Sbjct: 516 WATAFNEEAEVLLSASAQELGELKE--KDGDTYMEKIGAAAFKSYIFKLRIRLE 567
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 60/101 (59%), Gaps = 7/101 (6%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLIGSTQ--ERYRFLISDSV-STQHAMLATQLNDR 61
LT +++ I G+ +P+ Q++ K + S+ +RYR L+SD + S MLATQLND
Sbjct: 4 LTEGALNRIMKGEEVDEPVFQILGHKKLASSASGDRYRLLVSDGILSNSFTMLATQLNDL 63
Query: 62 VKTGQVKKGSVVQLIDYICSTVQN----RKIIVVLNMETII 98
+ + + S+V++ Y STV N R ++V+L++E ++
Sbjct: 64 ITNNTLSEHSIVKIKRYAISTVNNGGTQRNVMVILSIEVLV 104
>gi|409045840|gb|EKM55320.1| hypothetical protein PHACADRAFT_255854 [Phanerochaete carnosa
HHB-10118-sp]
Length = 540
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 157/449 (34%), Positives = 252/449 (56%), Gaps = 26/449 (5%)
Query: 209 IPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
PI L+PYQ W I+ +VT K D+R+Y+NARGDGK+FS L+D D GEI+ T FN VD
Sbjct: 110 FPIEGLSPYQNNWTIRVKVTQKSDIRQYSNARGDGKLFSAVLMD-DTGEIKATAFNNNVD 168
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
FY +E G++Y ISKG + A+K FN++ NE+E+ L+ + ++ C D + + F
Sbjct: 169 EFYPKLEEGKIYYISKGQVSLAKKKFNNVNNEYELGLQRGTIIEEC--RDGPVLNIHYKF 226
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD 388
+ ++ + +DV+GIV ++ + + G + +R L + D SG SV LTLWG
Sbjct: 227 IPLDQLMNTNPGDTIDVLGIVKEMSDVTHLTSRQGNDLTKRELTIVDRSGASVRLTLWG- 285
Query: 389 FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWF 448
K+ + E + P+++ KS KV DF G+S+ + S+ + INPD +AH LR W+
Sbjct: 286 ---KQADRYCESGE----PIIAWKSVKVGDFGGRSLSMLSSSSMEINPDIPDAHVLRGWY 338
Query: 449 DSGGK----NAATVSISREIAAGGA--KNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITF 502
D+ GK T S R +GGA ++EI + + +++ LG +KPD+ + A I
Sbjct: 339 DTDGKVQDFQPQTSSAPR--GSGGAFNRDEI-RLLDDVRSANLGGGDKPDFFSAHATIMH 395
Query: 503 IKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLT 562
IKSD+ Y AC ++ CNKKV + + W+C++C++ + YRY++ + D +G
Sbjct: 396 IKSDNIAYPACQ----NQGCNKKVIEQHDGWRCEKCDKVFERPSYRYIMAMAVADHSGQV 451
Query: 563 WVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQ 622
W F E+G I A +L LK +DD ++ +++ S V Y F + K E + +
Sbjct: 452 WFQCFNEAGVVIFDMTADQLVELKD--RDDAQYNKVLESAVGTTYNFTCRAKMESFQENN 509
Query: 623 RVKITVIRADQVNYSSESRYLLDLISKSF 651
RV+ V + ++Y E YL+ L+S +
Sbjct: 510 RVRYGVQKILPLDYKEEGNYLMKLLSSPW 538
>gi|303391020|ref|XP_003073740.1| DNA replication factor A protein 1 [Encephalitozoon intestinalis
ATCC 50506]
gi|303302888|gb|ADM12380.1| DNA replication factor A protein 1 [Encephalitozoon intestinalis
ATCC 50506]
Length = 572
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 168/469 (35%), Positives = 264/469 (56%), Gaps = 51/469 (10%)
Query: 196 HGPILKNEAPARI----------IPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKV 245
HG L E R+ I LNP+ +W IK RV KGD+RR++N +G+GKV
Sbjct: 141 HGKALDEEDKKRVKKDIKDEGEFTAINMLNPFHNKWMIKGRVVLKGDIRRFSNQKGEGKV 200
Query: 246 FSFDLLDSDG-GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIF 304
F+F++ SDG ++++ CF+ VD F+ I+EVG+VY +SKG++K A K ++ ++EI
Sbjct: 201 FNFEI--SDGTAQVKIICFSDCVDIFFPIVEVGKVYSVSKGTVKMANKQYSTNPFDYEII 258
Query: 305 LEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV-NPSVPILRKNG 363
L+ S V CT +D S P+ F+F +S++ + N+ DVIG+V V PS ++R
Sbjct: 259 LDKNSEVR-CTVDDGS-PRYFFNFIKLSDL--SLGNAYCDVIGVVREVYAPSTVMVRSTQ 314
Query: 364 METQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS 423
E +R + L D SG SV LTLWG + +D+ VL +KS KV++F+G S
Sbjct: 315 NELLKRDIILVDESG-SVRLTLWGP---------KAELDIEGGVVLGLKSVKVSEFNGIS 364
Query: 424 IGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNE 483
I T +Q+ INPD EAHEL W+ S GK+ V++ R K E + + ++K
Sbjct: 365 ISTTGGSQVVINPDIPEAHELAGWYQSTGKDM-QVALPR-------KEEKRRLIQEVKEN 416
Query: 484 GLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ--SGNRWQCDRCNQE 541
L S T++ + F+K D+ YT+C CNKKV SGN ++C+RCN
Sbjct: 417 ELAYS------TIQGTVMFLKEDALWYTSCK----GEGCNKKVVMEDSGN-YRCERCNMT 465
Query: 542 IDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRS 601
++C+YRY++ + D TG W++ F E+ G PA+E+ + E +++ +I+
Sbjct: 466 YEDCNYRYMVTMHLGDFTGQVWLSLFDEAAASFFGIPAQEMKRMSEESPAELQ--ALIKG 523
Query: 602 RVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
F +YLFR+K K++ Y DE R++ + + + ++ ES+ LLD I K+
Sbjct: 524 MYFKEYLFRIKSKQDSYNDEIRMRYSGLSSSPLDIRKESKRLLDAIEKA 572
>gi|392595534|gb|EIW84857.1| replication factor-A protein 1 [Coniophora puteana RWD-64-598 SS2]
Length = 598
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/448 (33%), Positives = 250/448 (55%), Gaps = 20/448 (4%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
+ PI L+PYQ W IKARVT K ++R ++NARG+GK+F+ L+D + GEIR T FNAVV
Sbjct: 165 VFPIEGLSPYQNNWTIKARVTQKSEVRNWSNARGEGKLFNVTLMD-ESGEIRATGFNAVV 223
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D Y +E G+VY +SK + A+K F++++N++E+ LE + V+ C + + +P +++
Sbjct: 224 DELYPKLEEGKVYYVSKARVNLAKKKFSNIQNDYELSLEKNTEVEECLDTTN-LPTIKYN 282
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
F + E+ES + DVIGIV P I K +R L + D S SV +TLWG
Sbjct: 283 FISLGELESLAKDVNCDVIGIVKEAGPLSEITSKTNRTIPKRELTIVDKSQFSVRMTLWG 342
Query: 388 DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREW 447
K E+ PV++ K KV D+ G+S+ + S+ + I+PD EAH LR W
Sbjct: 343 --------KQAELYSAEDQPVIAFKGVKVGDYGGRSLSMMSSSLMSISPDIPEAHALRGW 394
Query: 448 FDSGGKNAATVSISREIAAGGAKNEIHKT----VSQIKNEGLGRSEKPDWVTVRAFITFI 503
+D G + S + G + +++ +S +K+ LG +K D+ + RA I I
Sbjct: 395 YDGIGNEKTFTAQSSAVPLGASFGGFNRSELRHISDVKDSQLGMGDKADFFSTRASIMHI 454
Query: 504 KSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTW 563
K+++ Y AC ++ CNKKVT G+ W+C++C++ + +YRY++ + D +G W
Sbjct: 455 KTENIAYPAC----ANQGCNKKVTDVGDGWRCEKCDKTFERPEYRYIVSIAVADWSGQAW 510
Query: 564 VTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQR 623
+ F ++GE I G A E+ +K D+ + ++ + F + K++ Y D R
Sbjct: 511 LQGFNDAGEAIFGKSADEVMEIKN--CDEQEYNAVMAQATGVTFNFGCRAKQDTYNDNTR 568
Query: 624 VKITVIRADQVNYSSESRYLLDLISKSF 651
V+ + + V+Y E+++L++L+ +
Sbjct: 569 VRYGISKILSVDYREEAKHLVELLQSDW 596
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 11/106 (10%)
Query: 6 TPNSISLINGGDVNSKPLVQVMDIKLIG------STQERYRFLISDSVSTQHAMLATQLN 59
TP I I G VQ++ IK + +T +RYR +ISD V AMLAT+LN
Sbjct: 16 TPEDIDNIGSGHT-----VQLLSIKKVSQSANSSNTVDRYRLIISDGVHFIQAMLATKLN 70
Query: 60 DRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIG 105
D V ++ K +VV + C+ VQ +++I+VLN++ + D E IG
Sbjct: 71 DLVANNELGKNTVVIIDQLTCNFVQEKRLIIVLNLQVLTRDEEKIG 116
>gi|322778947|gb|EFZ09361.1| hypothetical protein SINV_08959 [Solenopsis invicta]
Length = 572
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/447 (34%), Positives = 248/447 (55%), Gaps = 22/447 (4%)
Query: 207 RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV 266
R PIAAL+PYQ RW IKARV K ++ ++++RG+GK F L+D + GEIR F +
Sbjct: 135 RTTPIAALSPYQNRWVIKARVIHKSLIKTWSDSRGEGKFFFMGLID-ESGEIRCKAFGEM 193
Query: 267 VDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQF 326
VD+FY++I G VY IS+ +LK A K +N +KN++E+ + + + + C + ++ IP Q+
Sbjct: 194 VDKFYDLIVAGNVYYISRCTLKTANKQYNSMKNDYEMLMTSDTEIVPCRDSNNDIPTLQY 253
Query: 327 SFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLW 386
+F IS++E E N ++DV+G+V +V + G E +R +++ D S V +TLW
Sbjct: 254 NFSPISQVEHKEKNDLLDVLGVVTTVGDVQHFTARTGRELIKRNISIVDDSDTMVTVTLW 313
Query: 387 GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELRE 446
G E D ++++K +V++F+GK + I S+ + +P+ EAH LR
Sbjct: 314 G--------TQAEEFDASNNTIIAIKEARVDEFNGKHLSLIMSSIIEKDPNIPEAHRLRG 365
Query: 447 WFDSGGKNAATVSISREIAAGGAK--NEIHKTVSQIKNEGLGRSEK-PDWVTVRAFITFI 503
W+ + G + S+SR GG+ N T + + LG+ PD T+ A I I
Sbjct: 366 WYTAVGHSETAKSLSR---VGGSTDFNGPLYTFQEATDARLGKKMNLPDSFTIVATIKQI 422
Query: 504 KSDSFCYTACPLMIGDRQCNKK-VTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLT 562
++++ Y ACPL C KK + Q+ ++C++CN++ YR L ++ D TG
Sbjct: 423 RTENSPYRACPL----ESCKKKLIDQNNGTFRCEKCNKKYPNFTYRLLANMELADATGSR 478
Query: 563 WVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQ 622
W+TAF E E+ILG A+EL LK +D + + I F ++F LK + E++ D
Sbjct: 479 WITAFNEEAEKILGMSAQELGELKENDKD--AYLQKIGEATFKTFMFNLKARSEVFQDTM 536
Query: 623 RVKITVIRADQVNYSSESRYLLDLISK 649
R+K +NY + +L+D +SK
Sbjct: 537 RIKRVCTSVRPINYKTYLPHLIDKVSK 563
>gi|409079138|gb|EKM79500.1| hypothetical protein AGABI1DRAFT_114047 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 591
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 152/452 (33%), Positives = 249/452 (55%), Gaps = 23/452 (5%)
Query: 202 NEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVT 261
N + PI L+PYQ W IKARVT K D++ ++N+RG+GK+FS L+D D GEI+ T
Sbjct: 151 NTSGVATFPIENLSPYQNNWTIKARVTQKSDIKNWSNSRGEGKLFSVTLMD-DSGEIKAT 209
Query: 262 CFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSI 321
FN+VVD + +E +VY ISK + A+K F+++ N++E+ LE ++ + C E +
Sbjct: 210 AFNSVVDELFPRLEDSKVYYISKARVNFAKKKFSNVTNDYELTLERSTQITEC-HETTGL 268
Query: 322 PKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRS 380
P+ +++F + ++E+ ++I DVIG++ ++ I R Q+R L L D SG S
Sbjct: 269 PEMRYTFVGLEKLENLNKDAICDVIGVLKDISAVSEITARTTNRSFQKRELTLVDKSGCS 328
Query: 381 VELTLWGDFCNKEGQKLQ-EMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFA 439
++LTLWG K+ + E +G F K KV DF G S+ T PST + ++P
Sbjct: 329 IQLTLWG----KQAESFTGEPGSIGAF-----KGVKVGDFGGVSLSTTPSTHIQLDPHIQ 379
Query: 440 EAHELREWFDSGGKNAATVS---ISREIAAGGAKNEIH-KTVSQIKNEGLGRSEKPDWVT 495
+ + LR W+DS G + + S I G A N +++++IK +G +K D
Sbjct: 380 DCYTLRGWWDSQGSDMSFQSKTVIGGGGGLGIAFNRAQVRSLNEIKEAEVGMGDKADTFC 439
Query: 496 VRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQI 555
+ I I+ + Y ACP CNKK++ SG+ W CD+C + +YRY+L +
Sbjct: 440 CQGTIVHIRDQNLLYPACP----GNNCNKKMSMSGDTWVCDKCGTNAETPEYRYILSMAV 495
Query: 556 QDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKE 615
D +G W+ F E+ + G ELY LK ++D+ ++ +I Y F + K+
Sbjct: 496 ADWSGQAWLQGFNEAAVIVFGMSGNELYDLK--MRDEDKYNAVIHKAHCQTYNFACRAKK 553
Query: 616 ELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
+ Y D R++ + R ++V+Y +E++YL DL+
Sbjct: 554 DSYEDRVRIRYGISRIEKVDYHAEAQYLRDLL 585
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 23 LVQVMDIKLI---GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYI 79
+VQ + +K + G +RYR +ISD AMLATQ N V+T Q+KK SV +
Sbjct: 30 VVQFLSVKKVNATGGAGDRYRLIISDGKYYIQAMLATQCNSLVETDQIKKFSVAAIERAS 89
Query: 80 CSTVQNRKIIVVLNMETIILDCEPIGNPKIF 110
+TVQ +++++VL++ + E I NP+
Sbjct: 90 SNTVQGKRLVIVLSLRILGYPNEKINNPQAL 120
>gi|426196046|gb|EKV45975.1| hypothetical protein AGABI2DRAFT_193885 [Agaricus bisporus var.
bisporus H97]
Length = 591
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 152/452 (33%), Positives = 249/452 (55%), Gaps = 23/452 (5%)
Query: 202 NEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVT 261
N + PI L+PYQ W IKARVT K D++ ++N+RG+GK+FS L+D D GEI+ T
Sbjct: 151 NTSGVATFPIENLSPYQNNWTIKARVTQKSDIKNWSNSRGEGKLFSVTLMD-DSGEIKAT 209
Query: 262 CFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSI 321
FN+VVD + +E +VY ISK + A+K F+++ N++E+ LE ++ + C E +
Sbjct: 210 AFNSVVDELFPRLEDSKVYYISKARVNFAKKKFSNVTNDYELTLERSTQITEC-HETTGL 268
Query: 322 PKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRS 380
P+ +++F + ++E+ ++I DVIG++ ++ I R Q+R L L D SG S
Sbjct: 269 PEMRYTFVGLEKLENLNKDAICDVIGVLKDISAVSEITARTTNRSFQKRELTLVDKSGCS 328
Query: 381 VELTLWGDFCNKEGQKLQ-EMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFA 439
++LTLWG K+ + E +G F K KV DF G S+ T PST + ++P
Sbjct: 329 IQLTLWG----KQAESFTGEPGSIGAF-----KGVKVGDFGGVSLSTTPSTHIQLDPHIQ 379
Query: 440 EAHELREWFDSGGKNAATVS---ISREIAAGGAKNEIH-KTVSQIKNEGLGRSEKPDWVT 495
+ + LR W+DS G + + S I G A N +++++IK +G +K D
Sbjct: 380 DCYTLRGWWDSQGSDMSFQSKTVIGGGGGLGIAFNRAQVRSLNEIKEAEVGMGDKADTFC 439
Query: 496 VRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQI 555
+ I I+ + Y ACP CNKK++ SG+ W CD+C + +YRY+L +
Sbjct: 440 CQGTIVHIRDQNLLYPACP----GNNCNKKMSMSGDTWVCDKCGTNAETPEYRYILSMAV 495
Query: 556 QDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKE 615
D +G W+ F E+ + G ELY LK ++D+ ++ +I Y F + K+
Sbjct: 496 ADWSGQAWLQGFNEAAVIVFGMSGNELYDLK--MRDEDKYNAVIHKAHCQTYNFACRAKK 553
Query: 616 ELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
+ Y D R++ + R ++V+Y +E++YL DL+
Sbjct: 554 DSYEDRVRIRYGISRIEKVDYHAEAQYLRDLL 585
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 23 LVQVMDIKLI---GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYI 79
+VQ + +K + G +RYR +ISD AMLATQ N V+T Q+KK SV +
Sbjct: 30 VVQFLSVKKVNATGGAGDRYRLIISDGKYYIQAMLATQCNSLVETDQIKKFSVAAIERAS 89
Query: 80 CSTVQNRKIIVVLNMETIILDCEPIGNPKIF 110
+TVQ +++++VL++ + E I NP+
Sbjct: 90 SNTVQGKRLVIVLSLRILGYPNEKINNPQAL 120
>gi|340923669|gb|EGS18572.1| putative DNA replication protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 617
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 252/445 (56%), Gaps = 21/445 (4%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I P+ AL+PY +W IK RV +K +R ++ A G+GK+F+ L D + G+IR+T FN V
Sbjct: 184 IYPVEALSPYNSKWTIKVRVRSKPPIRTWHKASGEGKLFNVILFD-ETGDIRMTGFNDAV 242
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
DR+Y++++ G+VY IS ++ AQ+ + +++E+ ++ + ++ E+D S+P+ + +
Sbjct: 243 DRWYDVLQEGQVYYISGCKVRMAQRKLDARASDYEMVIDRDTVIEK-AEDDGSVPQVRLN 301
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMET-QRRILNLKDTSGRSVELTLW 386
+I ++++ E N+IVDV+G++ V P I+ K + +R + L D +G SV LTLW
Sbjct: 302 LCNIQDLQNVEANTIVDVLGVIKEVGPVDSIISKTTQKPFDKRDITLVDDTGYSVRLTLW 361
Query: 387 GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELRE 446
G K D +++ K KV+DF+G+++ + S +PD EAH L+
Sbjct: 362 G--------KQATSFDATEESIVAFKDCKVSDFNGRNLSLLSSGSWSADPDIPEAHRLKG 413
Query: 447 WFDSGGKNAATV---SISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFI 503
W+DS G+ + + S+S AA G K++ KTV Q+K+E LG E+PD+ +++ I I
Sbjct: 414 WYDSMGRTQSFLTHKSMSSVGAATGRKDDF-KTVRQVKDENLGMGEQPDYFSLKGTIVAI 472
Query: 504 KSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLT 562
K D+FCY +C + + CNKKVT G+ W+C++C+ D YRY L + D TG
Sbjct: 473 KQDNFCYPSC--LTDNPPCNKKVTDMGDGTWRCEKCDVTHDRARYRYNLGVMVSDHTGHL 530
Query: 563 WVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQ 622
WVT F + ++G A EL L+ D I + FR++ K + +GD
Sbjct: 531 WVTCFDDIANVVMGRTADELVSLQ---GDKAALDAIFEEASCQKLTFRVRAKMDTFGDMP 587
Query: 623 RVKITVIRADQVNYSSESRYLLDLI 647
RV+ + A +++ SE L +LI
Sbjct: 588 RVRYQAMSATPIDFKSEGHKLAELI 612
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 22 PLVQVMDIKLIGSTQ---------ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSV 72
P++Q + IK + Q ERYR ++SD + MLATQ N V G +++ +
Sbjct: 28 PVLQCLQIKTLSGQQTGAQQPGGAERYRIVLSDMRNYVQCMLATQANHVVHDGSLQRNCI 87
Query: 73 VQLIDYICSTVQNRKIIVVLNMETIILDCEP--IGNPK 108
V+L Y +V+ + ++VVL++E I P IG PK
Sbjct: 88 VRLKQYQAQSVKGKWVLVVLDLEVITSLGTPDKIGEPK 125
>gi|242019128|ref|XP_002430017.1| Replication protein A 70 kDa DNA-binding subunit, putative
[Pediculus humanus corporis]
gi|212515079|gb|EEB17279.1| Replication protein A 70 kDa DNA-binding subunit, putative
[Pediculus humanus corporis]
Length = 600
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 195/641 (30%), Positives = 313/641 (48%), Gaps = 61/641 (9%)
Query: 13 INGGDVNSKPLVQVMDIKLIGS--TQERYRFLISDS-VSTQHAMLATQLNDRVKTGQVKK 69
++GG+++S P++QV+ K + S ERYR LISD AM+ATQLND V +G++ +
Sbjct: 1 MSGGNIDS-PIMQVLGSKKLTSNNATERYRLLISDGKYHNSFAMIATQLNDLVSSGELSE 59
Query: 70 GSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQP 129
++V++ YI S + + + IG ++E+ P N PQ
Sbjct: 60 FTIVKIKRYITSLFNTSEKERYCIFNVVSVSFRYIGLKDSNEKTEM------PPENQPQA 113
Query: 130 VRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQP 189
+ A F + + ++ N V F
Sbjct: 114 TKPQANKAALYKVFKKLETKIYINK------------IVCTNIFIFVLGF---------- 151
Query: 190 PPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFD 249
+F N + + I PI++L+PYQ RW IKARVT K R Y++ARG+GK+FS
Sbjct: 152 --SFGNKPKLTAQVSTGTIHPISSLSPYQNRWCIKARVTNKQAPRNYSSARGEGKLFSVV 209
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
D + GEI+ T FN+ VD+F ++++V + K L N L + +L +
Sbjct: 210 FTD-ESGEIKCTGFNSAVDKFSDLLQVS----LRKLKLFYTYLFSNFLTESFNFYLVSNC 264
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQR 368
+V C E+D +P ++F IS++ +SIVDVIG+ I R G E ++
Sbjct: 265 SVQPC-EDDVGLPSAVYNFVPISKLIEMSVDSIVDVIGVAKHATDVQNITARSTGRELKK 323
Query: 369 RILNLKDTSGRSVELTLWGDFCNKEGQKLQEMV--DVGFFPVLSVKSGKVNDF-SGKSIG 425
R + L D+SG SV +TLWG E V D PV++VKS ++ +F GKS+
Sbjct: 324 REVVLVDSSGASVSMTLWG----------SEAVGFDCSENPVVAVKSARLTEFMGGKSLS 373
Query: 426 TIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGL 485
++ + +PD EAH+LR W+ SGG SIS + +G N + ++GL
Sbjct: 374 VQMNSTVLRDPDIDEAHKLRGWWASGGSTLECSSISNKGTSGSGSNTNWVLFGDLTSQGL 433
Query: 486 GRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNR-WQCDRCNQEIDE 544
G +K D+ + + K ++ Y +CP+ C KK+ N ++C++CN+E +
Sbjct: 434 GLGDKADYFSAVVNVLMAKQENCIYKSCPV----EDCKKKIIDLNNGVYRCEKCNREHNN 489
Query: 545 CDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVF 604
YR LL AQ+ D +G +WVT F E +++LG A+ + K +D + E F
Sbjct: 490 FKYRMLLSAQVSDYSGSSWVTMFHEEAQKLLGVDAE--IIGKMMDNNDESYKEYFNDINF 547
Query: 605 NQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLD 645
Q+ + + K E Y DE+R+K TV+ + ++Y S +R LL+
Sbjct: 548 KQFQMKFRTKMESYNDEKRLKTTVVNLEPIDYKSYARRLLE 588
>gi|397580873|gb|EJK51733.1| hypothetical protein THAOC_29071 [Thalassiosira oceanica]
Length = 438
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 149/453 (32%), Positives = 257/453 (56%), Gaps = 39/453 (8%)
Query: 217 YQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEV 276
Y RW I+A+V +K +R ++NA+G+G++FS ++LDS G +++ T F VD+FY IE
Sbjct: 2 YSNRWVIRAKVVSKSGVRTWSNAKGEGQLFSMEILDSAGTDVKCTFFKEAVDKFYNFIEE 61
Query: 277 GRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIES 336
RVY S G LK A +N K+++EI + ST++L D I + + F ++++E
Sbjct: 62 DRVYTFSGGRLKVANMQYNKCKSQFEITFDQNSTIELDQGGGDDI-RASYDFVKVADVER 120
Query: 337 AENNSIVDVIGIVISVN-PSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQ 395
++ N +D++G+V +V P+ + +K+G E + L ++D SG + LT+WGD NK +
Sbjct: 121 SQPNDYIDILGVVKAVGEPATIVSKKSGKELTKCELTVEDDSGAEITLTMWGDTANKARE 180
Query: 396 KLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDS-GGKN 454
+ G PV++ K +V+D+ G+ T+ + +NP+ +A L +W+ + GGK+
Sbjct: 181 RF------GGTPVVAFKRARVSDYGGR---TLSGSGFSVNPNIPQAAALSQWWAANGGKS 231
Query: 455 AATVSISREIAAGGAKN-------EIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSD- 506
A SR +++GG E+ K V+ IK++ LG +EKPD+++ +A ITF+K D
Sbjct: 232 A-----SRSLSSGGMGGNRGPDPFEMRKAVNSIKSDQLGYNEKPDYLSFKATITFLKKDK 286
Query: 507 ----SFCYTACPLMIGDRQCNK--KVTQ-SGNRWQCDRCNQEIDECDYRYLLQAQIQDQT 559
YTAC G C K TQ S W CD+C Q + +C R++ + D T
Sbjct: 287 QGDEGAWYTACA--NGGDPCKNMYKATQTSDGNWHCDKCQQTLPDCVRRFIFSGTVADDT 344
Query: 560 GLTWVTAFQESGEEILGCPAKELYMLKYELQD----DVRFGEIIRSRVFNQYLFRLKIKE 615
+W++ F + EE+LG + K D DV R+ +++++F+ K+++
Sbjct: 345 STSWISVFNQQAEELLGGATADDLYDKITSGDGGGRDVYDSAFARA-TYSEWIFKCKVRQ 403
Query: 616 ELYGDEQRVKITVIRADQVNYSSESRYLLDLIS 648
E+ GDEQR+K +++ A ++Y++ESR LL ++
Sbjct: 404 EMVGDEQRIKTSLVAAHPLDYAAESRSLLQALA 436
>gi|401827683|ref|XP_003888134.1| replication factor A protein 1 [Encephalitozoon hellem ATCC 50504]
gi|392999334|gb|AFM99153.1| replication factor A protein 1 [Encephalitozoon hellem ATCC 50504]
Length = 572
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 161/443 (36%), Positives = 253/443 (57%), Gaps = 39/443 (8%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDG-GEIRVTCFNAVVDR 269
I LNP+ +W IK RV KGD+RR+ N +G+GKVF+F+L SDG ++++ CF+ VD
Sbjct: 166 INMLNPFHNKWVIKGRVVVKGDIRRFTNQKGEGKVFNFEL--SDGTAQVKIICFSDCVDI 223
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFR 329
F+ I+EVG+VY ++KG++K A K ++ ++EI L+ S V DD P+ F+F
Sbjct: 224 FFPIVEVGKVYTVTKGTVKMANKQYSTNPFDYEIILDKNSEVRCAA--DDGSPRYFFNFT 281
Query: 330 HISEIESAENNSIVDVIGIVI-SVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD 388
IS+I + ++ DVIG+V + PS ++R E +R + L D SG SV LTLW
Sbjct: 282 KISDI--SLGSAYCDVIGVVKEAYGPSTVMVRSTQNELLKRDVVLVDESG-SVRLTLW-- 336
Query: 389 FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWF 448
GQK + +D+ V+ +KS KV++F+G SI T +Q+ +NPD +EAHEL W+
Sbjct: 337 -----GQKAE--IDIEEGVVIGLKSIKVSEFNGISISTTGGSQVVVNPDISEAHELAGWY 389
Query: 449 DSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSF 508
S GKN V++ R K E + V ++K L S T++ + F+K D+
Sbjct: 390 QSIGKNMQ-VTLPR-------KEEKRRLVQEVKENELAYS------TIQGTVMFLKEDAL 435
Query: 509 CYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAF 567
Y +C CNKKV + G ++C+RCN ++C+YRY++ + D TG WV+ F
Sbjct: 436 WYASCK----GEGCNKKVMIEEGGNYRCERCNMTYEDCNYRYMVTMHLGDFTGQIWVSLF 491
Query: 568 QESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKIT 627
E+ G AKE+ + E +++ +IR F + LFR+K K++ Y DE R++ +
Sbjct: 492 DEAATGFFGISAKEMKEMSEESPAELQ--ALIRRMCFRECLFRIKSKQDNYNDELRMRYS 549
Query: 628 VIRADQVNYSSESRYLLDLISKS 650
+ ++ ES+ LLD+I K+
Sbjct: 550 GLSVSALDILKESKRLLDVIEKA 572
>gi|159129170|gb|EDP54284.1| replication protein A 70 kDa DNA-binding subunit [Aspergillus
fumigatus A1163]
Length = 529
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 175/590 (29%), Positives = 303/590 (51%), Gaps = 77/590 (13%)
Query: 67 VKKGSVVQLIDYICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQKTIPSN 124
+KKG V+L + ++V+ +KI+++L++E + + + E IG P+ + + +
Sbjct: 2 LKKGCFVRLKSFQANSVKGKKILIILDLEVLQELGEAEKIGEPRPL-------ENKLEED 54
Query: 125 NLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQ 184
PQP ++ G F R +P VQ
Sbjct: 55 EKPQPTTISG----------------------GGFYGSKVQNQRG----------EPRVQ 82
Query: 185 PPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGK 244
P + + A I PI A++PY +W IKAR T+K ++ ++N +G+
Sbjct: 83 PARSSLTS-----------SHATIYPIEAISPYSHKWTIKARCTSKSAIKTWHNRNSEGR 131
Query: 245 VFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEI 303
+FS +LLD D GEIR T FN D Y++ G VY IS ++ A+K F +L N++E+
Sbjct: 132 LFSVNLLD-DSGEIRATGFNEQCDLLYDVFHEGGVYYISSPCRVQIAKKQFTNLNNDYEL 190
Query: 304 FLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNG 363
E + V+ ++ D +P+ +F+F + +++S E ++ +D+IG++ V + I+ K
Sbjct: 191 TFEKDTVVEKAEDQSD-VPQVRFNFTTVGDLQSVEKDTTIDIIGVLKDVGETTQIVSKTT 249
Query: 364 ME-TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFP--VLSVKSGKVNDFS 420
+ +R L L D+SG SV LT+WG ++ P V++ K KV+DF
Sbjct: 250 SKPYDKRELTLVDSSGFSVRLTIWG----------STALNFNATPESVIAFKGVKVSDFG 299
Query: 421 GKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVS-ISREIAAGGAKNEIH-KTVS 478
G+S+ + S + ++PD EAH L+ W+D+ G++ S + A+ AK H KT++
Sbjct: 300 GRSLSLLSSGSMTVDPDIEEAHRLKGWYDAQGRHETFASHATMSNASSSAKRLDHLKTIA 359
Query: 479 QIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDR 537
Q++ E LG SE + +++ + +IK D+ CY AC L G CNKKVT+ +W+C+
Sbjct: 360 QVREEQLGMSEDAVYFSLKGTVIYIKQDNMCYPAC-LSEG---CNKKVTELDPGQWRCES 415
Query: 538 CNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGE 597
C++ +YRY++ + D TG W++ F E G++++G A +L L+ + G+
Sbjct: 416 CDKTHPRPEYRYIMLINVSDHTGQLWLSCFDEVGKQLMGTSADQLMDLRQNGEKAA--GD 473
Query: 598 IIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
I + + FR + K + +GD+QR++ V A VNYS E+ L+ LI
Sbjct: 474 IFQEANCRTWNFRCRAKLDHFGDQQRIRYQVSTAKPVNYSEEASRLMALI 523
>gi|258568498|ref|XP_002584993.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906439|gb|EEP80840.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 561
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 174/589 (29%), Positives = 289/589 (49%), Gaps = 84/589 (14%)
Query: 58 LNDRVKTGQVKKGSVVQLIDYICSTVQNRK----------------IIVVLNMETIILDC 101
LN +G +++G V+L + ++V+ ++ I++VL+++ +
Sbjct: 6 LNHLAISGALRRGCFVRLKSFQANSVKGKRSAFPHTLAGNETDYIRILIVLDLDVL---- 61
Query: 102 EPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFST 161
E +G + E P+P+ + A T + ++G + S
Sbjct: 62 EDLGESERLGE--------------PKPLEMKAPEAETPATTTISSNGFYGMAPQHS--- 104
Query: 162 PNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRW 221
AP + R+ PT+ P A A I PI AL+PY +W
Sbjct: 105 -------APRQQNHQRASVPTMAP------------------AHANIYPIEALSPYSHKW 139
Query: 222 AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYL 281
IKAR T K ++ ++N G+G++F+ +LLD D GEIR T F D Y + E G VY
Sbjct: 140 TIKARCTNKSAIKTWHNRNGEGRLFNVNLLD-DSGEIRATAFKEQCDLLYPLFEEGSVYY 198
Query: 282 ISKGS-LKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENN 340
IS ++ A++ F+++ N++E+ E + ++ E +D +P+ +F+F +I ++S E
Sbjct: 199 ISSPCRVQMAKRGFSNVNNDYELTFEKDTVIEK-AENNDDVPQMRFNFTNIGGLQSVEKG 257
Query: 341 SIVDVIGIVISVNPSVPILRK-NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQE 399
+ +D +G++ SV+ + K G +R L L D +G SV LT+WG+ N
Sbjct: 258 TTIDFLGVLKSVDQVTEVPSKATGKRYTKRELTLVDDTGFSVRLTIWGNMAN-------- 309
Query: 400 MVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGK-NAATV 458
DV V++ K KV+DF G+S+ + S + +PD EAH+L+ W+D+ GK + T
Sbjct: 310 TFDVMPDSVIAFKGVKVSDFGGRSLSLLSSGTITADPDIEEAHKLKGWYDAQGKFDQFTF 369
Query: 459 SISREIAAG--GAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLM 516
E A G G++ + KT+ ++++E LG SEKPD+ +RA + FIK D+ CY AC
Sbjct: 370 HAFSENATGATGSRQDPPKTIVEVRDEQLGMSEKPDYFALRATVVFIKQDNICYPACV-- 427
Query: 517 IGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEIL 575
+CNKKV Q W C+ C + + +YRY+L A + D TG WV F E G ++
Sbjct: 428 --QERCNKKVIQLDSGEWLCEHCEKSTPQPEYRYILSANLSDHTGQLWVNCFDEVGRSLM 485
Query: 576 GCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRV 624
G A L +K DD E I + F+ + K + + D +R+
Sbjct: 486 GITANSLMEMKE--NDDKVASEAILDANCKMWNFKCRAKLDNFQDTERL 532
>gi|449688518|ref|XP_004211765.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Hydra magnipapillata]
Length = 398
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 159/416 (38%), Positives = 242/416 (58%), Gaps = 30/416 (7%)
Query: 53 MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQ-NRKIIVVLNMETIILDCE---PIGNPK 108
ML TQLND V+ V+ V+Q+ Y C+ +Q RK+I++L ++ ++ E IG P
Sbjct: 1 MLGTQLNDTVQEDMVEVRCVLQMDKYTCNVIQGTRKVIIILELKIVLKASEVPGKIGEPV 60
Query: 109 IFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFR 168
S+ LT Q+ N LP P++ N + G+ LQN S S ST N+
Sbjct: 61 QISDL-LTEQE----NLLPPPIKKENVN----GSSKLQNI----SNQIKSASTNNTKNLP 107
Query: 169 APNAGSIVRSFQPTV-QPPYQPPPNFRNHGP-ILKNEAPARIIPIAALNPYQGRWAIKAR 226
PN + + +P+ Q P + G + + + PI++L PYQ RW I+AR
Sbjct: 108 VPNKP--LSNQKPSAYSAANQKPSGYSTAGAGSVVDSNSKSVFPISSLTPYQNRWTIRAR 165
Query: 227 VTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS 286
+T K +R ++N+RGDGK+FS DL+D + GEIR T FN VVD++Y+++E+G+VY I+KGS
Sbjct: 166 ITNKSSIRTWSNSRGDGKLFSIDLVD-ESGEIRATAFNEVVDKYYDLLEIGKVYYITKGS 224
Query: 287 LKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVI 346
LK A K ++ LKN++E+ L S V+LC + D +P QF+F+ I IE ++++D++
Sbjct: 225 LKTANKQYSSLKNDYEMTLNNDSLVELCNDLCD-LPTLQFNFKQIKSIEDVNKDALIDIV 283
Query: 347 GIVISVNPSVPILRK-NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGF 405
GIV S + I K + +R + + D SG +V+ T+WG E +K +E D
Sbjct: 284 GIVKSSSEMQQITSKATNKQVWKRDITIVDQSGSAVQATIWG----SEAEKFEEYTDKN- 338
Query: 406 FPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSIS 461
PV+++K KV+DF G+S+ + S+ INPD EA+ELR WFD+GG N T SIS
Sbjct: 339 -PVVAIKGAKVSDFGGRSLSILNSSIFHINPDIPEAYELRGWFDNGGINEQTTSIS 393
>gi|70989823|ref|XP_749761.1| replication protein A 70 kDa DNA-binding subunit [Aspergillus
fumigatus Af293]
gi|66847392|gb|EAL87723.1| replication protein A 70 kDa DNA-binding subunit [Aspergillus
fumigatus Af293]
Length = 529
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 175/590 (29%), Positives = 302/590 (51%), Gaps = 77/590 (13%)
Query: 67 VKKGSVVQLIDYICSTVQNRKIIVVLNMETI--ILDCEPIGNPKIFSESELTAQKTIPSN 124
+KKG V+L + ++V+ +KI+++L++E + + + E IG P+ + + +
Sbjct: 2 LKKGCFVRLKSFQANSVKGKKILIILDLEVLQELGEAEKIGEPRPL-------ENKLEED 54
Query: 125 NLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQ 184
PQP ++ G F R +P VQ
Sbjct: 55 EKPQPTTISG----------------------GGFYGSKVQNQRG----------EPRVQ 82
Query: 185 PPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGK 244
P + + A I PI A++PY +W IKAR T K ++ ++N +G+
Sbjct: 83 PARSSLTS-----------SHATIYPIEAISPYSHKWTIKARCTTKSAIKTWHNRNSEGR 131
Query: 245 VFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEI 303
+FS +LLD D GEIR T FN D Y++ G VY IS ++ A+K F +L N++E+
Sbjct: 132 LFSVNLLD-DSGEIRATGFNEQCDLLYDVFHEGGVYYISSPCRVQIAKKQFTNLNNDYEL 190
Query: 304 FLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNG 363
E + V+ ++ D +P+ +F+F + +++S E ++ +D+IG++ V + I+ K
Sbjct: 191 TFEKDTVVEKAEDQSD-VPQVRFNFTTVGDLQSVEKDTTIDIIGVLKDVGETTQIVSKTT 249
Query: 364 ME-TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFP--VLSVKSGKVNDFS 420
+ +R L L D+SG SV LT+WG ++ P V++ K KV+DF
Sbjct: 250 SKPYDKRELTLVDSSGFSVRLTIWG----------STALNFNATPESVIAFKGVKVSDFG 299
Query: 421 GKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVS-ISREIAAGGAKNEIH-KTVS 478
G+S+ + S + ++PD EAH L+ W+D+ G++ S + A+ AK H KT++
Sbjct: 300 GRSLSLLSSGSMTVDPDIEEAHRLKGWYDAQGRHETFASHATMSNASSSAKRLDHLKTIA 359
Query: 479 QIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDR 537
Q++ E LG SE + +++ + +IK D+ CY AC L G CNKKVT+ +W+C+
Sbjct: 360 QVREEQLGMSEDAVYFSLKGTVIYIKQDNMCYPAC-LSEG---CNKKVTELDPGQWRCES 415
Query: 538 CNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGE 597
C++ +YRY++ + D TG W++ F E G++++G A +L L+ + G+
Sbjct: 416 CDKTHPRPEYRYIMLINVSDHTGQLWLSCFDEVGKQLMGTSADQLMDLRQNGEKAA--GD 473
Query: 598 IIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
I + + FR + K + +GD+QR++ V A VNYS E+ L+ LI
Sbjct: 474 IFQEANCRTWNFRCRAKLDHFGDQQRIRYQVSTAKPVNYSEEASRLMALI 523
>gi|396082253|gb|AFN83863.1| DNA replication factor A protein 1 [Encephalitozoon romaleae
SJ-2008]
Length = 573
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 201/662 (30%), Positives = 325/662 (49%), Gaps = 105/662 (15%)
Query: 3 VNLTPNSISLINGGDVNS----KPLVQVMDI-KL---IGSTQERYRFLISDSVSTQHAML 54
+ L P ++ + N+ P++Q+ + KL IG Q RYR +SD VS +
Sbjct: 1 MKLEPGTVEALYNSQTNNPLYKNPILQITSLGKLSVAIGDKQ-RYRVNLSDGVSYMKGIF 59
Query: 55 ATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETI--ILDCE-PIGNPKIFS 111
+++L + G V K S+++ + +V+++ V + ++ I DC IG P S
Sbjct: 60 SSELTPHFEKGLVSKYSLIKPGRF---SVRSKDGSVYIYIQEIQEYEDCNVEIGKPVNIS 116
Query: 112 ESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPN 171
+ S+N P P NP N R +
Sbjct: 117 TGNASF-----SDNQPSP------------------------GNPRRIEGSNQQHCRPTD 147
Query: 172 AGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKG 231
G R + + + I LNP+ +W IK RV K
Sbjct: 148 EGDKKRVRRDA--------------------DDEGEFVAINMLNPFYNKWTIKGRVVVKS 187
Query: 232 DLRRYNNARGDGKVFSFDLLDSDG-GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPA 290
D+RR+ N +G+GKVF+F++ SDG ++++ CF+ VD F+ I+EVG+VY+ISKG++K A
Sbjct: 188 DIRRFTNHKGEGKVFNFEI--SDGTAQVKIICFSDCVDIFFPIVEVGKVYIISKGTVKTA 245
Query: 291 QKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVI 350
K ++ ++EI L+ S V DD P+ F+F IS++ + ++ DVIG+V
Sbjct: 246 NKQYSTNPFDYEIILDKGSEVRCAA--DDGSPRYFFNFVKISDL--SLGSTYCDVIGVVK 301
Query: 351 SV-NPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVL 409
V +PS ++R E +R L D SG SV LTLWG + +D+ VL
Sbjct: 302 EVYSPSTVMIRSTQNELLKRDAILVDESG-SVRLTLWGP---------KAEIDIEGGMVL 351
Query: 410 SVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGA 469
+KS KV++F+G +I T +Q+ +NPD EAHEL W+ S GK+ VS+ R
Sbjct: 352 GLKSIKVSEFNGITISTTGGSQVVVNPDIPEAHELAGWYQSIGKDMQ-VSLPR------- 403
Query: 470 KNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-- 527
K E + + ++K L S T++ + F+K D+ YT+C CNKKV
Sbjct: 404 KEEKRRLIQEVKENELAYS------TIQGTVMFLKEDALWYTSCK----GEGCNKKVAME 453
Query: 528 QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKY 587
+SGN ++C+RCN ++C+YRY++ + D TG WV+ F E+ G A+E+ +
Sbjct: 454 ESGN-YRCERCNMTYEDCNYRYMVSMHLGDFTGQIWVSLFDEAASGFFGISAREMKEMSE 512
Query: 588 ELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
E +++ +IR F + LFR+K K++ Y DE R++ + + ++ ES+ LLD+I
Sbjct: 513 ESPTELQ--TLIRRMYFRECLFRIKSKQDSYNDELRMRYSGLNVITLDILKESKRLLDVI 570
Query: 648 SK 649
K
Sbjct: 571 EK 572
>gi|50553160|ref|XP_503990.1| YALI0E15642p [Yarrowia lipolytica]
gi|49649859|emb|CAG79583.1| YALI0E15642p [Yarrowia lipolytica CLIB122]
Length = 589
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 142/442 (32%), Positives = 245/442 (55%), Gaps = 33/442 (7%)
Query: 205 PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFN 264
PA ++PI L+PYQ +WAIK RVT+K D ++++N +G+G++F+ +D + GEIR T FN
Sbjct: 156 PATVMPIERLSPYQNKWAIKVRVTSKADKKKFSNTKGEGQLFNVTFID-ETGEIRATGFN 214
Query: 265 AVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE-IFLEATSTVDLCTEEDDSIPK 323
VD+FY ++E G+VY +++ + A K F+++ N++E +F T + E +IP
Sbjct: 215 QEVDKFYPMLEEGQVYYVTQCRVSMANKKFSNVNNDYELVFGRDTVIIQADEAEAAAIPT 274
Query: 324 QQFSFRHISEIESAENNSIVDVIGIVISVNP-SVPILRKNGMETQRRILNLKDTSGRSVE 382
+SF + +++ E + VDV+G+V +V P + + G +RR L L D SG +
Sbjct: 275 ANYSFVTLDKLQDVEVGNNVDVLGVVQNVGPLEDGVAKATGNPYKRRNLMLGDKSGFATR 334
Query: 383 LTLWGDFCNKEGQKLQEMVDVGFFPV---LSVKSGKVNDFSGKSIGTIPSTQLFINPDFA 439
LT +G+ D G PV +++K +V DF+G+++ T S+ + + P
Sbjct: 335 LTFFGEKATS--------FDEGTVPVGTIIAIKGARVGDFNGRNLSTSHSSTIAVEPAID 386
Query: 440 EAHELREWFDSGGKNAA-----TVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWV 494
E + L+ W+ S GK + T + ++ +AA T + G+SEKPD+
Sbjct: 387 ETYALKGWYASEGKQTSFKQLQTTTTNKPVAA---------TPIDVATSSYGQSEKPDYY 437
Query: 495 TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQ 554
T++A++ +++ +F Y AC CNKKV + G+ W+C++C + +D+ YRY+L
Sbjct: 438 TLQAWVVHVRTGNFAYPACQT----PDCNKKVVEHGDEWRCEKCEKNMDKPLYRYILSIN 493
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIK 614
+ D TG W+TAF E E I+G A +L ++ DD F + ++ QY R + K
Sbjct: 494 VGDATGSMWLTAFNEPAEVIMGMTADQLTEIQTSQGDD-EFEQAVQKVTGKQYTLRCRSK 552
Query: 615 EELYGDEQRVKITVIRADQVNY 636
+E Y +E + + V+ A ++Y
Sbjct: 553 QEFYNEESKARHQVLTAQALDY 574
>gi|19074669|ref|NP_586175.1| DNA REPLICATION FACTOR A PROTEIN 1 [Encephalitozoon cuniculi GB-M1]
Length = 623
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 246/450 (54%), Gaps = 39/450 (8%)
Query: 203 EAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDG-GEIRVT 261
E I LNP+ +WAIK RV K D+RR+ N +G+GKVF+F++ SDG ++++
Sbjct: 209 EDEGEFTAINMLNPFHNKWAIKGRVVMKSDIRRFTNQKGEGKVFNFEV--SDGTAQVKII 266
Query: 262 CFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSI 321
CF+ VD F+ I+EVG+VY I+KG++K A K ++ ++EI L+ +S V DD
Sbjct: 267 CFSDCVDIFFPIVEVGKVYTIAKGTVKMANKQYSTNPFDYEIILDKSSEVHRAA--DDGS 324
Query: 322 PKQQFSFRHISEIESAENNSIVDVIGIVISV-NPSVPILRKNGMETQRRILNLKDTSGRS 380
PK F+F IS++ N+ D IG+V V PS ++R E +R L D G S
Sbjct: 325 PKYFFNFVKISDL--TLGNAYCDTIGVVKEVYAPSTVMVRSTQSELLKRDAVLVDDGG-S 381
Query: 381 VELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAE 440
V LTLWG K + ++ G VL++KS KV++F+G SI T +Q+ NPD AE
Sbjct: 382 VRLTLWG-------PKAELEIESGM--VLALKSIKVSEFNGISISTTGGSQVVTNPDIAE 432
Query: 441 AHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFI 500
AHEL W+ S GK+ RE E + + ++K L S TV+ +
Sbjct: 433 AHELEGWYQSIGKDMQVTLPRRE--------EKRRLIQEVKESDLTYS------TVQGTV 478
Query: 501 TFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQT 559
F+K D YT+C CNKKV + G ++C+RCN ++CDYRY++ + D +
Sbjct: 479 MFLKEDGLWYTSCK----GEGCNKKVVMEDGGCYRCERCNMTYEDCDYRYMVTMHLGDFS 534
Query: 560 GLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYG 619
G WV+ F E G A+E+ ++ E +++ +IR F + LFR+K K++ Y
Sbjct: 535 GQMWVSLFDEVATSFFGISAREMKVMSEEAPGELQ--ALIRRMYFRECLFRIKSKQDSYN 592
Query: 620 DEQRVKITVIRADQVNYSSESRYLLDLISK 649
DE R++ + + + ++ ES+ LL +I K
Sbjct: 593 DEIRMRYSGLSVENLDILKESKRLLGVIEK 622
>gi|392512868|emb|CAD25779.2| DNA REPLICATION FACTOR A PROTEIN 1 [Encephalitozoon cuniculi GB-M1]
Length = 572
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 246/450 (54%), Gaps = 39/450 (8%)
Query: 203 EAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDG-GEIRVT 261
E I LNP+ +WAIK RV K D+RR+ N +G+GKVF+F++ SDG ++++
Sbjct: 158 EDEGEFTAINMLNPFHNKWAIKGRVVMKSDIRRFTNQKGEGKVFNFEV--SDGTAQVKII 215
Query: 262 CFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSI 321
CF+ VD F+ I+EVG+VY I+KG++K A K ++ ++EI L+ +S V DD
Sbjct: 216 CFSDCVDIFFPIVEVGKVYTIAKGTVKMANKQYSTNPFDYEIILDKSSEVHRAA--DDGS 273
Query: 322 PKQQFSFRHISEIESAENNSIVDVIGIVISV-NPSVPILRKNGMETQRRILNLKDTSGRS 380
PK F+F IS++ N+ D IG+V V PS ++R E +R L D G S
Sbjct: 274 PKYFFNFVKISDLTLG--NAYCDTIGVVKEVYAPSTVMVRSTQSELLKRDAVLVDDGG-S 330
Query: 381 VELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAE 440
V LTLWG K + ++ G VL++KS KV++F+G SI T +Q+ NPD AE
Sbjct: 331 VRLTLWG-------PKAELEIESGM--VLALKSIKVSEFNGISISTTGGSQVVTNPDIAE 381
Query: 441 AHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFI 500
AHEL W+ S GK+ RE E + + ++K L S TV+ +
Sbjct: 382 AHELEGWYQSIGKDMQVTLPRRE--------EKRRLIQEVKESDLTYS------TVQGTV 427
Query: 501 TFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQT 559
F+K D YT+C CNKKV + G ++C+RCN ++CDYRY++ + D +
Sbjct: 428 MFLKEDGLWYTSCK----GEGCNKKVVMEDGGCYRCERCNMTYEDCDYRYMVTMHLGDFS 483
Query: 560 GLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYG 619
G WV+ F E G A+E+ ++ E +++ +IR F + LFR+K K++ Y
Sbjct: 484 GQMWVSLFDEVATSFFGISAREMKVMSEEAPGELQ--ALIRRMYFRECLFRIKSKQDSYN 541
Query: 620 DEQRVKITVIRADQVNYSSESRYLLDLISK 649
DE R++ + + + ++ ES+ LL +I K
Sbjct: 542 DEIRMRYSGLSVENLDILKESKRLLGVIEK 571
>gi|449329996|gb|AGE96262.1| DNA replication factor a protein 1 [Encephalitozoon cuniculi]
Length = 623
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 246/450 (54%), Gaps = 39/450 (8%)
Query: 203 EAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDG-GEIRVT 261
E I LNP+ +WAIK RV K D+RR+ N +G+GKVF+F++ SDG ++++
Sbjct: 209 EDEGEFTAINMLNPFHNKWAIKGRVVMKSDIRRFTNQKGEGKVFNFEV--SDGTAQVKII 266
Query: 262 CFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSI 321
CF+ VD F+ I+EVG+VY I+KG++K A K ++ ++EI L+ +S V DD
Sbjct: 267 CFSDCVDIFFPIVEVGKVYTIAKGTVKMANKQYSTNPFDYEIILDKSSEVHRAA--DDGS 324
Query: 322 PKQQFSFRHISEIESAENNSIVDVIGIVISV-NPSVPILRKNGMETQRRILNLKDTSGRS 380
PK F+F IS++ N+ D IG+V V PS ++R E +R L D G S
Sbjct: 325 PKYFFNFVKISDL--TLGNAYCDTIGVVKEVYAPSTVMVRSTQSELLKRDAVLVDDGG-S 381
Query: 381 VELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAE 440
V LTLWG K + ++ G VL++KS KV++F+G SI T +Q+ NPD AE
Sbjct: 382 VRLTLWG-------PKAELEIESGM--VLALKSIKVSEFNGISISTTGGSQVVTNPDIAE 432
Query: 441 AHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFI 500
AHEL W+ S GK+ RE E + + ++K L S TV+ +
Sbjct: 433 AHELAGWYQSIGKDMQVTLPRRE--------EKRRLIQEVKESDLTYS------TVQGTV 478
Query: 501 TFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQT 559
F+K D YT+C CNKKV + G ++C+RCN ++CDYRY++ + D +
Sbjct: 479 MFLKEDGLWYTSCK----GEGCNKKVVMEDGGCYRCERCNMTYEDCDYRYMVTMHLGDFS 534
Query: 560 GLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYG 619
G WV+ F E G A+E+ ++ E +++ +IR F + LFR+K K++ Y
Sbjct: 535 GQMWVSLFDEVATSFFGISAREMKVMSEEAPGELQ--ALIRRMYFRECLFRIKSKQDSYN 592
Query: 620 DEQRVKITVIRADQVNYSSESRYLLDLISK 649
DE R++ + + + ++ ES+ LL +I K
Sbjct: 593 DEIRMRYSGLSVENLDILKESKRLLGVIEK 622
>gi|449547245|gb|EMD38213.1| hypothetical protein CERSUDRAFT_113363 [Ceriporiopsis subvermispora
B]
Length = 618
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 150/450 (33%), Positives = 244/450 (54%), Gaps = 24/450 (5%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I PI +L+PY W IKA VT K +R+++N RG+GK+FS +D D GEI+ T FN
Sbjct: 185 IYPIESLSPYMNNWTIKALVTQKSGIRKWSNDRGEGKLFSVVFVD-DTGEIKATAFNQAA 243
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D + ++ G+VYL+SKG + A+K FN++ NE+E+ LE T+ V+ C + + +P +++
Sbjct: 244 DDLHARLQEGKVYLVSKGRVGLAKKKFNNVVNEYELTLERTTEVEECRDVVN-VPTVKYN 302
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMET-QRRILNLKDTSGRSVELTLW 386
F I+ +++ E ++I D+I ++ P I K+ T +R L L D SG SV LTLW
Sbjct: 303 FVDIAGLQNVEKDAICDIIAVIKETGPMGEITTKSSNRTITKRELTLVDRSGYSVRLTLW 362
Query: 387 GDFCNKEGQKLQEMVDVG-FFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELR 445
G E + G PV++ K KV DF G+S+ S+ + +NPD +AH LR
Sbjct: 363 G--------AQAEQWNAGDEHPVVAFKGVKVGDFQGRSLSMSMSSSMQLNPDIPDAHLLR 414
Query: 446 EWFDSGGKNAATVSISREIAAGGA----KNEIHKTVSQIKNEGLGRSEKPDWVTVRAFIT 501
W+D GG + S + +GG+ K E V ++K +G G +K + + RA I
Sbjct: 415 GWYDGGGAEQSYQSHANNSGSGGSGLAFKREEVLPVQEVKEQGFGEPDKGEIFSSRATIM 474
Query: 502 FIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGL 561
++ ++ Y ACP C+KKV ++ + W+C++CN ++ YRY++ A + D +G
Sbjct: 475 HVRPENLTYPACPT------CHKKVIEAHDGWRCEKCNMSHEKPQYRYIITAAVADWSGQ 528
Query: 562 TWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDE 621
W F E G+ I G EL +K + D ++ + + Y F + K++ Y D
Sbjct: 529 AWFQGFNEMGQVIFGMSGDELMEIKE--RSDTEMQNVLSRVIGSTYNFVCRAKQDNYNDN 586
Query: 622 QRVKITVIRADQVNYSSESRYLLDLISKSF 651
R + V R + NY+ E Y+ +L+ +
Sbjct: 587 VRTRYGVSRIEPPNYAEEGNYIANLLRSEW 616
>gi|444516397|gb|ELV11146.1| Replication protein A 70 kDa DNA-binding subunit [Tupaia chinensis]
Length = 474
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 156/457 (34%), Positives = 248/457 (54%), Gaps = 64/457 (14%)
Query: 206 ARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
++++PIA+L PYQ +W I ARVT K +R ++N+RG+GK+F+ +L+D + GEIR T FN
Sbjct: 67 SKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFAIELVD-ETGEIRATAFNE 125
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQ 325
VD+F+ +IEV +VY SKG+LK A K F +KN++E+ ++V C E+D +P Q
Sbjct: 126 QVDKFFPLIEVNKVYYFSKGTLKIANKQFTTVKNDYEMTFNNETSVMPC-EDDHHLPTVQ 184
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELT 384
F F I E+ES +S+VD+IG+ S + I ++ E +R + L DTSG+ V T
Sbjct: 185 FDFTKIDELESKSKDSLVDIIGVCKSYEDATKITVKSTNREVSKRNIYLMDTSGKVVTTT 244
Query: 385 LWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHEL 444
LWG+ +K Q PVL+VK +V+DF G+S+ + S+ + +NPD EA++L
Sbjct: 245 LWGEDADKFDGSRQ--------PVLAVKGARVSDFGGRSLSVLSSSTVIMNPDIPEAYKL 296
Query: 445 REWFDSGGKNAATVSISREIAAGG-AKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFI 503
R WFDS G+ VSIS + GG N KT+ ++K+E LG+ +K D+ + A + ++
Sbjct: 297 RGWFDSEGQALDGVSISDLKSGGGIGSNTNWKTLYEVKSENLGQGDKADYFSSVATVVYL 356
Query: 504 KSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLT 562
+ ++ Y ACP ++ CNKKV Q ++C++C+ E YR +
Sbjct: 357 RKENCMYQACP----NQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMI------------ 400
Query: 563 WVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYG--- 619
L ++ F E+ ++ F + F++++K E Y
Sbjct: 401 --------------------------LSNEQAFEEVFQNANFRSFTFKIRVKLETYNVQT 434
Query: 620 ------DEQRVKITVIRADQVNYSSESRYLLDLISKS 650
DE R+K TV+ V+Y R L+ I K+
Sbjct: 435 AFLFSKDESRIKATVMDVKPVDYREYGRRLIMNIRKN 471
>gi|440795064|gb|ELR16205.1| replication factora protein 1 (rpa1) subfamily protein
[Acanthamoeba castellanii str. Neff]
Length = 553
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 152/459 (33%), Positives = 249/459 (54%), Gaps = 33/459 (7%)
Query: 209 IPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
+PI LNPYQ RW IKAR+T K D+R +NNARG +FS DLLD+ GGEIR T F
Sbjct: 106 MPIKGLNPYQNRWTIKARITHKSDMRPFNNARGQSFLFSVDLLDAFGGEIRCTFFGEAAT 165
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
++ + IE G+V+LI +GS+K A K F+ LKN++EI L+ + + TE+D SIP +F+F
Sbjct: 166 QWNDQIEAGQVFLIGRGSVKYANKRFSTLKNDYEISLDKNALIQ-PTEDDPSIPFYKFNF 224
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD 388
I+++ + +D++G V+ I + G E Q+R++ + D+S VE+TLWG+
Sbjct: 225 VDIADLGGHAKDETIDILGAVLESGAIQDIRTQAGNELQKRVVKVGDSSNAQVEVTLWGE 284
Query: 389 FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWF 448
Q Q D G V+ K K++D++ +S+ + +++L P EA +REWF
Sbjct: 285 ------QAAQWSGDRGL--VVLFKGVKISDYNQRSLTVLRTSKLEFEPRIPEADRVREWF 336
Query: 449 DSGGKNAATVSISREIAAGGAK--------------NEIHKTVSQIKNEGLGRSEKPDWV 494
++ G+ S+SR G +E K+ + +K G E +
Sbjct: 337 ETAGQ-GEVASMSRNDFKGRGGGGEGGFGGGDKRPWDETRKSFAAVKQVAFGGQESV-YF 394
Query: 495 TVRAFITFIKSDSF---CYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLL 551
+VRA +T IK Y ACP +CNKKVT G + C +C D RY+L
Sbjct: 395 SVRATVTEIKHSRDHPPWYEACPT----EKCNKKVTSVGGAYHCTKCGATHDHYKPRYVL 450
Query: 552 QAQIQDQTGLTWVTAFQESGEEIL-GCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFR 610
D +G +W+T F ++ ++L G A +L + Q + ++ ++ + +F Y R
Sbjct: 451 SLNANDHSGSSWLTCFNDTASDVLNGTTADDLLEMLSRPQGESQYEDVFQKALFKSYNLR 510
Query: 611 LKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
++ + Y E +VK++V++ ++Y+ ES++L++ I+K
Sbjct: 511 VRATQSEYEGENKVKLSVVKVIPMDYAKESKFLINSIAK 549
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLI------GSTQERYRFLISDSVSTQHAML 54
M LT ++ ++ G PLVQV+D+K I ++ ERYR +ISD + Q AML
Sbjct: 1 MSSQLTHGAVEAMHKGQQIRTPLVQVIDVKKILGPNGQATSPERYRLVISDGIHFQQAML 60
Query: 55 ATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKI 88
ATQLN+ V G+++ +V+L +YIC+TV R+
Sbjct: 61 ATQLNELVNDGKLQPKCIVRLNEYICNTVHGRRF 94
>gi|412986814|emb|CCO15240.1| predicted protein [Bathycoccus prasinos]
Length = 773
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 157/457 (34%), Positives = 252/457 (55%), Gaps = 22/457 (4%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
P+ ALNPYQ W++ RVT ++R ++NA+G+GKV FD++D++G E++V CF
Sbjct: 143 PLQALNPYQQGWSVCVRVTTPIEVRTWHNAKGEGKVLGFDVVDAEGSEMKVVCFGDCALN 202
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDS---IPKQQF 326
E ++ VY ISK +L A +N + +E+ L+ + V E IPK Q+
Sbjct: 203 LAEKMQQYGVYEISKATLT-ASRNPRYAIGAYEMKLDHNTVVQPLPENAQGAMKIPKVQY 261
Query: 327 SFRHISEIESAENNSIVDVIGIVISVNP-SVPILRKNGMETQRRILNLKDTSGRSVELTL 385
+FR+I EIE+ ++ +DV+G+V V+P S+ +LR G E +R + L+D S VELTL
Sbjct: 262 NFRNIKEIETLMKDTSIDVMGVVHEVSPISMQMLRTGG-EKAKRSIKLRDDSSAEVELTL 320
Query: 386 WGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELR 445
WG+ + GQKL+ M+ P+L+ K V +F+GK++ +T + +NPD +A +LR
Sbjct: 321 WGEHADGLGQKLETMLFENQHPILACKRACVGEFNGKNLSIRNNTVMDVNPDHPKAGQLR 380
Query: 446 EWFDSGGKNAATVSIS---REIAAGGAKNEIHKTVSQIKNEGL-GRSEKPDWVTVRAFIT 501
W+D+GGK +S A G + + T+ QI+NE G WV R IT
Sbjct: 381 SWYDAGGKTEDVQVLSGGMGGAGAVGGRGDRFATIRQIENEAANGGCSNAFWVVCRGSIT 440
Query: 502 FIKS--DSFCYTACPLMIGDRQCNKKVTQS--GNRWQCDR-CNQEIDECDYRYLLQAQIQ 556
+I + + Y ACP+ R+C KK+ Q+ W+C+R + I D+RYL ++
Sbjct: 441 YIHNSDNGPMYPACPMDHDGRKCQKKMRQNEMNGMWECERHYDTVIPSVDWRYLCTVKLA 500
Query: 557 DQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRV-FNQYLFRLKIKE 615
D +G + F E GE++ G PA + K+ L D E R + + +Y F+LK+ E
Sbjct: 501 DYSGAVMASVFGEVGEKLFGMPAPD---FKHLLDTDFHAFEKKRDDIRWREYKFKLKVNE 557
Query: 616 ELYGDEQRVKITVIRADQV---NYSSESRYLLDLISK 649
+ Y D RVK T+ + + N++ ES+ L++ + K
Sbjct: 558 DTYNDMTRVKYTIQSVEPICDGNFADESKVLIEKLKK 594
>gi|351704190|gb|EHB07109.1| Replication protein A 70 kDa DNA-binding subunit [Heterocephalus
glaber]
Length = 514
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/427 (33%), Positives = 234/427 (54%), Gaps = 55/427 (12%)
Query: 221 WAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
W + ARVT K +R ++N+RG+GK+FS +L+D + GEIR T FN VD+F+ +IEV +VY
Sbjct: 131 WTVCARVTNKSQIRTWSNSRGEGKLFSLELVD-ESGEIRATAFNEQVDKFFPLIEVNKVY 189
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENN 340
SKG+LK A K F +KN++E+ ++V C E+D +P QF F I ++E+ +
Sbjct: 190 YFSKGTLKIANKQFTAVKNDYEMTFNNETSVVPC-EDDHHLPTVQFDFTGIGDLENKSKD 248
Query: 341 SIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQE 399
S++D+IGI S + I ++ + E +R + L D SG+ V TLWG+ +K Q
Sbjct: 249 SLIDIIGICKSYEDATKITVKSSNREVAKRNIYLMDMSGKVVTATLWGEDADKFDGSRQ- 307
Query: 400 MVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVS 459
PV+++K +V+DF G+++ + S+ + +NPD EA++LR WFD+ G+ VS
Sbjct: 308 -------PVMAIKGARVSDFGGRTLSVLSSSTIIMNPDIPEAYKLRGWFDAEGQALDGVS 360
Query: 460 ISREIAAG-GAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIG 518
IS + G GA N KT+ ++K+E LG+ +K D+ + A + +++ ++ Y ACP
Sbjct: 361 ISDLKSGGLGASNTNWKTLYEVKSENLGQGDKADYFSSVATVVYLRKENCMYQACPT--- 417
Query: 519 DRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGC 577
+ CNKKV Q ++C++C++E YR +
Sbjct: 418 -QDCNKKVIDQQNGLYRCEKCDREFPNFKYRMI--------------------------- 449
Query: 578 PAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYS 637
L ++ F E+ ++ F ++F++++K E Y DE R+K TV+ V+Y
Sbjct: 450 -----------LSNEQAFEEVFQNANFRSFMFKIRVKLETYNDESRIKATVMDVKPVDYR 498
Query: 638 SESRYLL 644
R L+
Sbjct: 499 DYGRRLI 505
>gi|300708826|ref|XP_002996585.1| hypothetical protein NCER_100307 [Nosema ceranae BRL01]
gi|239605898|gb|EEQ82914.1| hypothetical protein NCER_100307 [Nosema ceranae BRL01]
Length = 573
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 148/453 (32%), Positives = 252/453 (55%), Gaps = 37/453 (8%)
Query: 203 EAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTC 262
E P + I ++NP+ +W IK R+ K D+R+++N +G+GK+FSF++ D D G+I+V
Sbjct: 154 EDPNKYTQINSINPFCNKWIIKGRIVLKSDIRKFSNKKGEGKLFSFEIAD-DSGQIKVVA 212
Query: 263 FNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIP 322
F+ VD FY IIE+GRVY I KG +K ++K F++ N++EI L+ S + ED+ P
Sbjct: 213 FSESVDIFYPIIEIGRVYTIQKGEIKMSKKTFSNNNNDYEIQLDVNSEIKKV--EDNETP 270
Query: 323 KQQFSFRHISEIESAENNSIVDVIGIVISVNPSVP-ILRKNGMETQRRILNLKDTSGRSV 381
K F+F I +I S+ N+ +D++GIV +V I++ E+ RR + L D +G S+
Sbjct: 271 KFFFNFVKIKDITSS--NAPIDIVGIVKEAGEAVSFIVKATQKESLRRNITLIDETG-SI 327
Query: 382 ELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEA 441
T W G K +E ++V VL++KS KV+DF G S+ +I ++Q+ NPD +E+
Sbjct: 328 RATFW-------GAKAEEEIEVD--SVLAIKSIKVSDFGGVSLSSIHTSQIHKNPDISES 378
Query: 442 HELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFIT 501
H L W+++ GKN R++ +S +KN+ E P + VRA +
Sbjct: 379 HSLLGWYNTEGKNVKIDLPERDLKIFN--------ISDVKNQ-----EMP-YSAVRATLM 424
Query: 502 FIKSDSFCYTACPLMIGDRQCNKKVTQSG-NRWQCDRCNQEIDECDYRYLLQAQIQDQTG 560
FIK D+ Y +C + C KKV ++ ++C++C++ EC +RYL+ A I D TG
Sbjct: 425 FIKEDNLMYDSCK----EENCTKKVYKNEFGEYRCEKCDKNSYECTHRYLIHANISDSTG 480
Query: 561 LTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGD 620
W T F + +LG A + + D + I+ ++ +Y+ +L+ +++ Y D
Sbjct: 481 QLWATLFNDQAILLLGMSASDFREMA--DNDPNQSQMFIKKFLYREYIIKLRSRQDNYND 538
Query: 621 EQRVKITVIRADQVNYSSESRYLLDLISKSFRK 653
E +++ + +VNY E++ + + K R+
Sbjct: 539 EIKMRHNISEIREVNYKEETKKEILYVEKLLRE 571
>gi|393245622|gb|EJD53132.1| replication factor-a protein [Auricularia delicata TFB-10046 SS5]
Length = 617
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 146/450 (32%), Positives = 231/450 (51%), Gaps = 43/450 (9%)
Query: 205 PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFN 264
P + PI L+PYQ +W I+ARVT K +++ ++N +G+GK+FS +D GEIR T FN
Sbjct: 185 PQPVYPIEGLSPYQNKWTIQARVTNKSEMKSWSNTKGEGKLFSCTFMDQ-SGEIRATAFN 243
Query: 265 AVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQ 324
+ +E ++ G VY ++K + A+K F++L NE+EI ++ + ++ ++D +P Q
Sbjct: 244 TAAEELFEKLKEGNVYYVTKARVSVAKKKFSNLPNEYEITMDRNTEIEEIVDDDIDVPLQ 303
Query: 325 QFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGM-ETQRRILNLKDTSGRSVEL 383
++ F + +++ + + DVIG+V V P L K E +R L + D S SV L
Sbjct: 304 KYEFVSLKTLDTLNKDEVCDVIGVVQEVGPVNKFLAKTTQRELTKRDLTIVDQSECSVRL 363
Query: 384 TLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHE 443
TLWG K E PV++ K KV DF G+++ + S L I+PD E+H
Sbjct: 364 TLWG--------KQAENWSRDDKPVVAFKGCKVGDFGGRTLSLLSSGSLAIDPDLEESHR 415
Query: 444 LREWFDSGGKNAA------------TVSISR-EIAAGGAKNEIHKTVSQIKNEGLGRSEK 490
LR WFD+ GK+A + I R E A E+ + Q
Sbjct: 416 LRGWFDAQGKDATFHSFSSGGGGVASGPIDRLEAMPLAAVREMEIVIDQ----------- 464
Query: 491 PDWVTVRAFITFIKS-DSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRY 549
P RA + +K+ D Y AC ++CNKK++++ +W+C+ C Q DE YRY
Sbjct: 465 PQLFVTRAAVVHVKADDKMWYAAC------QRCNKKISEASGKWRCEHCKQNWDEPSYRY 518
Query: 550 LLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLF 609
+L + D T W+TAF ++G I+G +L+ +K QD+ F I++ V Y F
Sbjct: 519 MLSIAVADNTSQCWLTAFNDAGLTIVGQSGNDLHKIKG--QDESGFNAIVKKAVGKYYTF 576
Query: 610 RLKIKEELYGDEQRVKITVIRADQVNYSSE 639
+ K E Y D R K T+ R +++ E
Sbjct: 577 SCRAKSETYQDLTRTKYTISRLQPLDWKQE 606
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 20 SKPLVQVMDIKLI-----GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQ 74
++P++QV+ IK I G + R R L+SD + M TQLN +++ G++ + +VV+
Sbjct: 27 TEPILQVVQIKEIVSNKNGGSSNRRRGLVSDGRNYAPVMFTTQLNQQIEEGKLGRNAVVR 86
Query: 75 LIDYICSTVQNRKIIVVLNMETIILDCEPIGNPK 108
+ C+T+Q +++IV+L +E + IG PK
Sbjct: 87 VKSMTCNTMQEKRLIVLLEVEVLEALEYKIGEPK 120
>gi|189241203|ref|XP_970077.2| PREDICTED: similar to replication factor a 1, rfa1 [Tribolium
castaneum]
Length = 585
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 148/445 (33%), Positives = 234/445 (52%), Gaps = 23/445 (5%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I PIA+LNP+ W I+ARV K ++R ++NA+G+GK+FS DL+D GGEIR T F +V
Sbjct: 154 ISPIASLNPFHNNWIIRARVVNKTNVRNWSNAKGEGKLFSIDLVDK-GGEIRCTAFRDLV 212
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D+F++ +EV +VY ISK L+P + F LK+++E++ + ++ ++++ IP+ ++
Sbjct: 213 DKFFDRLEVDKVYYISKCQLQPINRQFCSLKHQFEMYFTPETIIEPSYDDNEIIPQITYN 272
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSGRSVELTLW 386
F I ++ E +IVDVIG+ +++ + K+ E Q+R L L D + ++ L LW
Sbjct: 273 FTTIDKVAVMEAGTIVDVIGVCKTISELQSFVAKSTNREMQKRQLVLVDQTKTAISLNLW 332
Query: 387 GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG-KSIGTIPSTQLFINPDFAEAHELR 445
G E V PV+ VK+ K+ +F G KSI + ++ L I+P+ E H LR
Sbjct: 333 GS--------QAESFAVTGNPVILVKNAKIYEFRGAKSITLMGTSLLKIDPEIRETHILR 384
Query: 446 EWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKS 505
W+ S G ++S G K Q SEKP + I ++
Sbjct: 385 RWYHSEGNQVEITNVSHRNGYGSTPWLTFKEARQ-----QTISEKPLYYQTFGTILLVRL 439
Query: 506 DSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWV 564
D Y +CP + C KKV N ++C++CN+E YR L+ + D + WV
Sbjct: 440 DRAVYKSCP----NADCQKKVLDLENGMYRCEKCNREFPNFKYRLLVSMNVADSSSSQWV 495
Query: 565 TAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRV 624
T F E+ILG A+E+ L D V + F Q++F+ + K E Y DEQ++
Sbjct: 496 TVFSSEAEKILGKTAQEIGELMETDPDTV--ANMFEEAQFKQFIFKCRAKIETYNDEQKM 553
Query: 625 KITVIRADQVNYSSESRYLLDLISK 649
K V+ V+Y + YL+D I K
Sbjct: 554 KTVVVTVAPVDYEEYNAYLVDRIEK 578
>gi|440797647|gb|ELR18729.1| replication factora protein 1 (rpa1) subfamily protein
[Acanthamoeba castellanii str. Neff]
Length = 646
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 181/633 (28%), Positives = 297/633 (46%), Gaps = 71/633 (11%)
Query: 38 RYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETI 97
RYR +SD A+LA+QL V+ G + GS+V+L+D+ ++V ++++IV+LN+E +
Sbjct: 59 RYRLTLSDGRHYMMALLASQLAHLVEGGTLATGSIVRLLDFAVTSVHDKRLIVILNLE-L 117
Query: 98 ILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPG 157
+ I N + +Q + PS P + + +S +FNL + + P
Sbjct: 118 VSPPRAIVNEDHLESIDQQSQASTPS---AAPFPASPSYSTHSPSFNLSALASALPKTPA 174
Query: 158 ---------------SFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKN 202
+ P+SG +P A + R+ T P++ P P K
Sbjct: 175 KSVFTFGAAASPPASTAPPPSSGFDLSPLAAVLPRTSGSTHASPFRSTPPRLQASP--KA 232
Query: 203 EAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTC 262
+ I +A LNPY RW I+ +VT+KGD++ Y ARG GK+ + DL+D G EIR
Sbjct: 233 DDVGVITSVADLNPYLSRWTIRVKVTSKGDVKHYQTARGPGKLLAIDLMDVAGTEIRAVM 292
Query: 263 FNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIP 322
FN VD+F II+ G VY I K +LK A K F+H+ N++EI + S V+ D+ P
Sbjct: 293 FNEAVDKFESIIQQGNVYSIEKATLKVANKKFSHINNDYEITISPASVVEAVA---DTFP 349
Query: 323 KQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVE 382
F +S+I + + ++ N ++ ++R L L + SVE
Sbjct: 350 GLVCHFAPLSDIREKKADDLL------------------NTIDLEKRSLALS-SREVSVE 390
Query: 383 LTLWGDFCNK-EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEA 441
LTLWG EG VL +KS KV+++ + L A
Sbjct: 391 LTLWGQAAASFEGSAGD---------VLGLKSVKVSEWQETFV-------LCATERMKPA 434
Query: 442 HELREWFDSGGKNAATVSISREIAA-GGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFI 500
G A++ SR A K E KT+ +IK L S +V V A +
Sbjct: 435 MGYYPGKSLGATQASSYGSSRLFPARRKHKAEAVKTIQEIK--ALDVSGGSAFVVVNATV 492
Query: 501 TFIKSD---SFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQD 557
FIK D + Y +CP + C +KV G ++C+ CN D C YRY++ ++ D
Sbjct: 493 AFIKYDISGNTYYRSCP----NESCARKVVDVGGSYRCEMCNASYDHCQYRYVMSVRLID 548
Query: 558 QTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEEL 617
T W T F + G +LG PA E+ + D E++ + +++ +L++ EE
Sbjct: 549 HTDSLWATVFNDVGATLLGVPASEVADICENRSDQRALEEVMNRGLLHKWRLKLRVAEES 608
Query: 618 YGD-EQRVKITVIRADQVNYSSESRYLLDLISK 649
+G+ ++R++ T++ A+ +NY++ + + IS+
Sbjct: 609 WGNFDKRIRATIMSAEPLNYAASASDVTSSISR 641
>gi|302667076|ref|XP_003025132.1| hypothetical protein TRV_00711 [Trichophyton verrucosum HKI 0517]
gi|291189215|gb|EFE44521.1| hypothetical protein TRV_00711 [Trichophyton verrucosum HKI 0517]
Length = 475
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 149/446 (33%), Positives = 243/446 (54%), Gaps = 25/446 (5%)
Query: 186 PYQPPPNFRNHGPILKN--EAPARIIPIAALNPY-QGRWAIKARVTAKGDLRRYNNARGD 242
P+ PP +F+N + + A I I AL+P+ RW IKAR T K +++ + N G+
Sbjct: 47 PHNPPQHFQNAQRSRPSGMASNANIFSIEALSPFANNRWTIKARCTHKSNIKTWKNTFGE 106
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEW 301
GK+FS +LLD D GEIR T F D Y I E G VY IS ++K A+K F+++ N++
Sbjct: 107 GKLFSVNLLD-DSGEIRATAFKDQCDLLYPIFEEGAVYYISSPCTVKMAKKEFSNVNNDY 165
Query: 302 EIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK 361
E+ + + V+ +++D +P+ +F+F + ++S + + +DV+GI+ V+ + + K
Sbjct: 166 ELTFDRDTVVEKAEDQND-VPQIRFNFTSLGNLQSIDKGTTIDVLGILKDVDATSQVTSK 224
Query: 362 N-GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFS 420
G +R L L D SG SV LT+WG+ D V++ K KV+DF
Sbjct: 225 TTGKPYDKRELTLVDNSGFSVRLTVWGNTATN--------FDTPPESVVAFKGVKVSDFG 276
Query: 421 GKSIGTIPSTQLFINPDFAEAHELREWFDSGGK-NAATVSISREIAAGGAKNEIHKTVSQ 479
G+++ + S + ++PD EAH L+ W+D+ GK N+ T S G KT+S+
Sbjct: 277 GRTLSLLSSGTVTVDPDIEEAHRLKGWYDAQGKSNSFTAYSSGATGGGSGSWPTFKTISE 336
Query: 480 IKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQC-NKKVTQSG-NRWQCDR 537
I++E L ++ + +++A + +K D+ CY ACP + C NKKVT+ ++W C+R
Sbjct: 337 IRDEELPSADSFEAFSLKATVIHVK-DNLCYPACP----NEACKNKKVTRGDLDQWHCER 391
Query: 538 CNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGE 597
C + YRY+L D TG W++ F E+G+ I G A EL +K E DD E
Sbjct: 392 CERSYANPKYRYILSLNACDHTGQIWLSCFDEAGQMIFGMTADELMKIKEE--DDAAANE 449
Query: 598 IIRSRVFNQYLFRLKIKEELYGDEQR 623
I + + + F+ + K + Y ++QR
Sbjct: 450 ITKGATYCTWNFKCRAKLDTYQEQQR 475
>gi|255074989|ref|XP_002501169.1| hypothetical protein MICPUN_57417 [Micromonas sp. RCC299]
gi|226516432|gb|ACO62427.1| hypothetical protein MICPUN_57417 [Micromonas sp. RCC299]
Length = 525
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 145/481 (30%), Positives = 251/481 (52%), Gaps = 30/481 (6%)
Query: 186 PYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKV 245
P P P + + + + + I ALNPY G W +KA++ KG++R + NARG+ V
Sbjct: 49 PVTPAP-VKKEAAAMPTSSGKKHLAINALNPYMGTWTVKAKLAVKGNIRTFRNARGESSV 107
Query: 246 FSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFL 305
+ + D++G I+ T + + ++ I+EVG+VY +SKGSL+PA K ++ + NE+E+ L
Sbjct: 108 CTLEFCDAEGTAIQATLWKDAIAKYDSILEVGKVYYVSKGSLRPANKKYSSVNNEYEMSL 167
Query: 306 EATSTVDLCTEEDDSIPKQQFSFRHISEIESAE----NNSIVDVIGIVISVNPSVPILRK 361
+ ++LC + D + K Q ++ + +I+ VD++ +V +V I RK
Sbjct: 168 DGRCEIELCADGDADVDKMQRAY-DLCKIDQLARKIGGRGTVDILAVVTAVGDLGSIKRK 226
Query: 362 -NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFS 420
+G E QRR L L D + R+V TLW ++G+ L+ MV PV++++ +V+D++
Sbjct: 227 SDGGELQRRDLTLLDETKRTVTCTLWNSLAVEQGESLKNMV----APVVAIRGVRVSDYN 282
Query: 421 GKSIGTIPSTQLFINPDFAE----AHELREWFDSGGKNAATVSISREIAA------GGAK 470
G S+ T+ ++L + P A+ LR W+D+ G A TV+ +A+ G +
Sbjct: 283 GVSVSTLARSELVLEPASADIATKTAALRAWYDADGATAETVAAGEGLASARRAGDGSGR 342
Query: 471 NEIHKTVSQIKNEGL--GRSEKPD-WVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT 527
+ +T + +E P V + I IK D Y A G+ NKKV
Sbjct: 343 SLTERTTFNALQPAIVPAATEPPAIGVVGHSTIVLIKPDQAMYYASNPEEGN---NKKVV 399
Query: 528 QSG-NRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLK 586
+ +W+ + DEC YRY+++ ++ D +G W+ F E E+LG A EL+ LK
Sbjct: 400 PTAEGKWEDPATGKVYDECAYRYIVRMKMSDASGGGWINVFHEQAVEMLGIGAGELHELK 459
Query: 587 YELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDL 646
+ + I++ F+ + +K K E Y E R ++TV++ + +Y++ESR LL L
Sbjct: 460 --TNNPAAYERKIKAAQFSSWNVMVKAKTEEYQGESRRRLTVMKCQKPDYAAESRNLLKL 517
Query: 647 I 647
+
Sbjct: 518 M 518
>gi|302498152|ref|XP_003011074.1| hypothetical protein ARB_02596 [Arthroderma benhamiae CBS 112371]
gi|291174622|gb|EFE30434.1| hypothetical protein ARB_02596 [Arthroderma benhamiae CBS 112371]
Length = 475
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 149/446 (33%), Positives = 244/446 (54%), Gaps = 25/446 (5%)
Query: 186 PYQPPPNFRNHGPILKN--EAPARIIPIAALNPY-QGRWAIKARVTAKGDLRRYNNARGD 242
P+ PP +F+N + + A I I AL+P+ +W IKAR T K +++ + N G+
Sbjct: 47 PHNPPQHFQNAQRSRPSGMASNANIFSIEALSPFANNKWTIKARCTHKSNIKTWKNTFGE 106
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEW 301
GK+FS +LLD D GEIR T F D Y I E G VY IS ++K A+K F+++ N++
Sbjct: 107 GKLFSVNLLD-DSGEIRATAFKDQCDLLYPIFEEGAVYYISSPCTVKMAKKEFSNVNNDY 165
Query: 302 EIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK 361
E+ + + V+ +++D +P+ +F+F + ++S + + +DV+GI+ V+ + + K
Sbjct: 166 ELTFDRDTVVEKAEDQND-VPQIRFNFTSLGNLQSIDKGTTIDVLGILKDVDATSQVTSK 224
Query: 362 N-GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFS 420
G +R L L D SG SV LT+WG+ D V++ K KV+DF
Sbjct: 225 TTGKPYDKRELTLVDNSGFSVRLTVWGNTATN--------FDTPPESVVAFKGVKVSDFG 276
Query: 421 GKSIGTIPSTQLFINPDFAEAHELREWFDSGGK-NAATVSISREIAAGGAKNEIHKTVSQ 479
G+++ + S + ++PD EAH L+ W+D+ GK N+ T S GG KT+S+
Sbjct: 277 GRTLSLLSSGTVTVDPDIEEAHRLKGWYDAQGKSNSFTAYSSGATGGGGGSWPTFKTISE 336
Query: 480 IKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQC-NKKVTQSG-NRWQCDR 537
I++E L ++ + +++A + +K D+ CY ACP + C NKKVT+ ++W C+R
Sbjct: 337 IRDEELPSADSFETFSLKATVIHVK-DNLCYPACP----NEACKNKKVTRGDLDQWHCER 391
Query: 538 CNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGE 597
C + YRY+L D TG W++ F E+G+ I G A EL +K E DD E
Sbjct: 392 CERSYANPKYRYILSLNACDHTGQIWLSCFDEAGQMIFGMTADELMKIKEE--DDTAANE 449
Query: 598 IIRSRVFNQYLFRLKIKEELYGDEQR 623
I + + + F+ + K + Y ++QR
Sbjct: 450 ITKGATYCTWNFKCRAKLDTYQEQQR 475
>gi|270013263|gb|EFA09711.1| hypothetical protein TcasGA2_TC011844 [Tribolium castaneum]
Length = 593
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/453 (32%), Positives = 234/453 (51%), Gaps = 31/453 (6%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I PIA+LNP+ W I+ARV K ++R ++NA+G+GK+FS DL+D GGEIR T F +V
Sbjct: 154 ISPIASLNPFHNNWIIRARVVNKTNVRNWSNAKGEGKLFSIDLVDK-GGEIRCTAFRDLV 212
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D+F++ +EV +VY ISK L+P + F LK+++E++ + ++ ++++ IP+ ++
Sbjct: 213 DKFFDRLEVDKVYYISKCQLQPINRQFCSLKHQFEMYFTPETIIEPSYDDNEIIPQITYN 272
Query: 328 FRHISEIESAENNSIV--------DVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSG 378
F I ++ E +IV DVIG+ +++ + K+ E Q+R L L D +
Sbjct: 273 FTTIDKVAVMEAGTIVGNWRMSILDVIGVCKTISELQSFVAKSTNREMQKRQLVLVDQTK 332
Query: 379 RSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG-KSIGTIPSTQLFINPD 437
++ L LWG E V PV+ VK+ K+ +F G KSI + ++ L I+P+
Sbjct: 333 TAISLNLWGS--------QAESFAVTGNPVILVKNAKIYEFRGAKSITLMGTSLLKIDPE 384
Query: 438 FAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVR 497
E H LR W+ S G ++S G K Q SEKP +
Sbjct: 385 IRETHILRRWYHSEGNQVEITNVSHRNGYGSTPWLTFKEARQ-----QTISEKPLYYQTF 439
Query: 498 AFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQ 556
I ++ D Y +CP + C KKV N ++C++CN+E YR L+ +
Sbjct: 440 GTILLVRLDRAVYKSCP----NADCQKKVLDLENGMYRCEKCNREFPNFKYRLLVSMNVA 495
Query: 557 DQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEE 616
D + WVT F E+ILG A+E+ L D V + F Q++F+ + K E
Sbjct: 496 DSSSSQWVTVFSSEAEKILGKTAQEIGELMETDPDTV--ANMFEEAQFKQFIFKCRAKIE 553
Query: 617 LYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
Y DEQ++K V+ V+Y + YL+D I K
Sbjct: 554 TYNDEQKMKTVVVTVAPVDYEEYNAYLVDRIEK 586
>gi|145356040|ref|XP_001422250.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582490|gb|ABP00567.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 573
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 143/449 (31%), Positives = 250/449 (55%), Gaps = 25/449 (5%)
Query: 209 IPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
+P+AALNPY+ W +K ++T KG++R Y +ARG GKV S D +D +G I T + ++
Sbjct: 131 VPLAALNPYRTPWTVKVKLTNKGNVREYKSARGPGKVCSVDFVDEEGTAIGATLWREAIE 190
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQ--- 325
++ ++EVG+VY +SKGSLKPA K ++ N++E+ L+ +D+C + D S ++
Sbjct: 191 KYDSVLEVGKVYYVSKGSLKPADKRYSTSGNDYEMNLDGKCEIDVCNDIDQSSAQKMQRA 250
Query: 326 FSFRHISEIES---AENNSIVDVIGIVISVNPSVPILRK-NGMETQRRILNLKDTSGRSV 381
++F I+++ S A N V + +S S I RK + E +R + L D S ++V
Sbjct: 251 YAFVPINKLASKIGARGNVDVVAVVKEVSELSS--IRRKSDNTELNKREVVLVDDSAKTV 308
Query: 382 ELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP-DFAE 440
LTLW + G++L M + PV++++S +V D+ G SIGT+ + + I+P D
Sbjct: 309 RLTLWNALAVEVGEQLASMTN----PVVAIRSVRVGDYEGVSIGTVSRSDIVIDPEDVPR 364
Query: 441 AHELREWFDSGGKNAATVSISREIAAG--GAKNEIHKT-VSQIKNEGLGR-SEKPDWVTV 496
A E+++W+ GG +A T + + + G K+EI + +++++ E + ++KP + V
Sbjct: 365 AVEIKKWWSEGGSSAETTAAGEGLTSAQQGQKSEIMASNLAELQPEEIAPVTDKPTFAWV 424
Query: 497 RAFITFIKSD-SFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQI 555
A K D + YTA P + NKKV +S +W C+ Q D C+ RY+++ +
Sbjct: 425 CAHTVMCKPDQTMYYTATP----EEGNNKKVIESDGKWYCEANGQTYDTCERRYIMRFKA 480
Query: 556 QDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKE 615
QD + W+ AF E ++ G A E++ LK D + ++ + F +K+
Sbjct: 481 QDSSEGAWLNAFNEEATKMFGMTANEMHELKE--NDFAAYERAVKKMTCQHWSFLVKVVT 538
Query: 616 ELYGDEQRVKITVIRADQVNYSSESRYLL 644
E Y E + ++T ++ + VNY++ES+ LL
Sbjct: 539 EEYQGESKRRMTAVKCNPVNYAAESKKLL 567
>gi|342185999|emb|CCC95484.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 464
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/439 (33%), Positives = 243/439 (55%), Gaps = 34/439 (7%)
Query: 207 RIIPIAALNPYQG-RWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
+I PI +L P+ G +W I+ARVT K D+R +N GK+FSF L+D + IR T FN
Sbjct: 8 QIQPIDSLTPFLGSKWWIRARVTDKSDVRTWNKPTSQGKLFSFTLID-ESASIRATVFND 66
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD-SIPKQ 324
VD F +I G+VY S G +K A + F+++ N++E+ +++S + + + SIP Q
Sbjct: 67 AVDLFNPLIVNGQVYFFSGGQVKNANRKFSNVNNDYELSFDSSSQISIARDASSASIPLQ 126
Query: 325 QFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSGRSVEL 383
+++F I ++ E S+VDV+ +++ V+ I +K+ G + +R + + D++ ++++
Sbjct: 127 RYNFVPIEILKQREVGSLVDVLAVILGVDELTTITQKSTGRDLIKRNVKVSDSTA-AIDV 185
Query: 384 TLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHE 443
TLW D Q M G VL+++ KV F G ++ T +NP+ + +
Sbjct: 186 TLWNDDAK------QWMHQPG--TVLAIRQLKVGSFDGVTLSATLQTSFDVNPNIPDVKK 237
Query: 444 LREWF-DSGGKNAATVSISREIAAGGAKN-----EIHKTVSQIKNEGLGRSEKPDWVTVR 497
L EWF +GG+ A++S +A GA N +K + EGLGR +PD++ VR
Sbjct: 238 LSEWFISTGGRGVASLSAQGTLAGAGAANSGEGYRGYKYFDDVAAEGLGRGPRPDYIDVR 297
Query: 498 AFITFIKSDSFCYTACPLMIGDRQCNKKVTQS---GNRWQCDRCNQEIDECDYRYLLQAQ 554
++K D+ Y ACP CNKKVT G+R++C++C+Q + RY++ Q
Sbjct: 298 CVPVYLKQDAQWYDACP------NCNKKVTLEGALGDRYRCEKCDQTVVPTQ-RYIVSIQ 350
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIK 614
+ D W+T F ESG + G PA EL K + +D + ++ + R+ L RL++K
Sbjct: 351 VTDNVSQVWLTLFNESGIDFFGMPASELK--KRQEEDAMFVTKVAQMRMNRPVLMRLRVK 408
Query: 615 EELYG---DEQRVKITVIR 630
+E Y D++RV++TV+R
Sbjct: 409 DEPYTGGEDQERVRLTVVR 427
>gi|302687831|ref|XP_003033595.1| hypothetical protein SCHCODRAFT_53289 [Schizophyllum commune H4-8]
gi|300107290|gb|EFI98692.1| hypothetical protein SCHCODRAFT_53289, partial [Schizophyllum
commune H4-8]
Length = 432
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 142/441 (32%), Positives = 236/441 (53%), Gaps = 27/441 (6%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
IA + Y W IKARV K +R ++N RG G +F+ LDS GEIR T FN VDR
Sbjct: 1 IATIALYNSNWTIKARVVTKSAIRTWSNNRGSGSLFNVTFLDS-TGEIRATGFNQAVDRL 59
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRH 330
Y++++VGRV+ ++K ++ A++ F+++ N++E+ LE ++++ C ++ D +P +F F
Sbjct: 60 YDVLQVGRVFFVTKARVELAKRKFSNVNNDYELHLEQNTSIEPCLDDAD-VPVIKFDFVK 118
Query: 331 ISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSGRSVELTLWGDF 389
I ++ + E +S DVIG+V+ + I K+ ++R L + D SG SV +TLWG+
Sbjct: 119 IDQLLTTEKDSSCDVIGVVVDCSEVSEIATKSTNRAAKKRELTIADDSGYSVRVTLWGET 178
Query: 390 CNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFD 449
K + +PV++ K KV DF G+S+ + S+ +++N D A+ ELR+WFD
Sbjct: 179 AEKYSE--------AGYPVIAFKGVKVGDFGGRSLTMLTSSLMYVNLDHADTAELRDWFD 230
Query: 450 SGGKNAATVSISREIAAGGA--KNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDS 507
+ GK+ + + ++ + + +SQI++ G SE +VRA I IK+
Sbjct: 231 NTGKHRDFTAHTSSTSSSHYSFDHGDQRDLSQIRDATRGMSETTSNYSVRAMIMDIKAKP 290
Query: 508 FCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTA 566
Y AC C+KKV + S RW C++CN DYRY L I D TG A
Sbjct: 291 LAYPACR----SPGCSKKVVEISDGRWLCEKCNTSHSSPDYRYTLHILIGDATGTMLFQA 346
Query: 567 FQESGEEILGCPAKELYMLK----YELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQ 622
F + G+ ILG A + ++ Y+ D+ R+ + F + + E Y E
Sbjct: 347 FDDVGKVILGMSANAVIAMREANNYQGTDNALSRATKRT-----WNFVCRTRNEAYDGEP 401
Query: 623 RVKITVIRADQVNYSSESRYL 643
R++ + RA+ +++ E++ L
Sbjct: 402 RLRYEITRAEPIDFLEEAQEL 422
>gi|167519220|ref|XP_001743950.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777912|gb|EDQ91528.1| predicted protein [Monosiga brevicollis MX1]
Length = 540
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 145/448 (32%), Positives = 233/448 (52%), Gaps = 41/448 (9%)
Query: 207 RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV 266
R IP+ +LNPY RWAI+ RV AK +R YN+ RG+GK+FS DL+D+ GEIR T FNA
Sbjct: 124 RAIPLTSLNPYDRRWAIRVRVVAKPPIRTYNSDRGEGKIFSVDLVDA-SGEIRATGFNAD 182
Query: 267 VDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQF 326
DR Y + E +VY+I G +KP + FN L +E+EI ++T+TV TE D +
Sbjct: 183 CDRLYPLFEKNKVYMIQGGRIKPKNRRFNQLSHEYEITFDSTTTV---TESKD---MGAY 236
Query: 327 SFRHISEIESA----ENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSV 381
+F+ +E+E+ + + D++ ++ V I+ R E +R + L D S+
Sbjct: 237 NFKSFAELEAMPITRDTMAFADILAVIKEVADVTTIVTRAAQKELSKREVTLVDKDNVSL 296
Query: 382 ELTLWGDFCNKEGQKLQEMVDVGFFP--VLSVKSGKVNDFSGKSIGTIPSTQLFINPDFA 439
TLW G++ + VD G P V+++K+ +++DF+G+S+ ++ INPD
Sbjct: 297 SCTLW-------GKEAEGFVDAGGHPGVVMAIKAARISDFNGRSLSVASNSNYSINPDLK 349
Query: 440 EAHELREW--FDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVR 497
EAHEL+ W G ++ + + A+ H T + GL +K V
Sbjct: 350 EAHELKGWCVLIFGSRSRVCMGFDK----WNARQFWHLTATV----GLP-DDKSVAFQVT 400
Query: 498 AFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQ 556
I ++KSD+ Y ACP CNKKV +S ++C +C + E YR L I
Sbjct: 401 GTILYVKSDNIYYQACP------TCNKKVVEESDGSYECQKCAKSYKEFKYRLLTSFSIG 454
Query: 557 DQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEE 616
D +G W+ +F E E +LG A E+ + D RF + F + FR + + +
Sbjct: 455 DFSGSQWLQSFSEVAESVLGHSADEIG--SWSANSDPRFTTALADATFKTWTFRCRARTD 512
Query: 617 LYGDEQRVKITVIRADQVNYSSESRYLL 644
Y D+ R++++V A ++Y +S+ ++
Sbjct: 513 TYNDQSRLRVSVASAVPIDYVQDSKRMV 540
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 37/53 (69%)
Query: 52 AMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPI 104
AMLATQLN+ ++ ++ S+V++ +C+ V NR+I+++L++E + D + +
Sbjct: 13 AMLATQLNNLIQNDYIRVNSIVRVKQGVCNLVSNRRILILLDVEVVASDYDGV 65
>gi|424513270|emb|CCO66854.1| predicted protein [Bathycoccus prasinos]
Length = 587
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 157/510 (30%), Positives = 267/510 (52%), Gaps = 47/510 (9%)
Query: 171 NAGSIVRSFQ---PTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARV 227
N+ ++VR F P ++ P + R PIA+LNPYQ +W IKA++
Sbjct: 82 NSEALVREFSFVDENASPEFKTPGATGGGKTVPGVVNSRRSQPIASLNPYQPQWTIKAKL 141
Query: 228 TAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSL 287
KG+ R Y NA+G+GKV + +L+DS+G I+ T + V+R+ ++EVG++Y +SKGSL
Sbjct: 142 AVKGNTRTYRNAKGEGKVLTVELVDSEGTAIQATLWREAVERYENVLEVGKLYYVSKGSL 201
Query: 288 KPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD------SIPKQQFSFRHISEIESAENN- 340
+PA + + + N++E+ L+ S + +EE+ I ++ F F I ++ N+
Sbjct: 202 RPANRQYTTVNNDYEMSLDGKSEIVEASEEEQLESAAKKIFEKAFEFVSIGDLAKRVNSK 261
Query: 341 -SIVDVIGIVISVNPSVPILRK-NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQ 398
+ DV +V SV + RK + E Q+R L L D S +V+LTLW ++G+KL+
Sbjct: 262 RATCDVCAVVKSVADLSAVKRKSDNSEIQKRELTLCDESSSTVQLTLWNALATEQGEKLK 321
Query: 399 EMVDVGFFPVLSVKSGKVNDFSGKSIGTIPST--QLFINPDFAEAH-----------ELR 445
EM + PV+ V+S +V ++ G S+GT+ + Q+F + A+A E
Sbjct: 322 EMTN----PVIIVRSVRVTEYEGVSLGTLGKSEMQIFELDEAAKASVEEGEVPEKAIETA 377
Query: 446 EWFDSGGKNAATVSISREIAA------GGAKNEIHK-TVSQIKNEGL-GRSEKPDWVTV- 496
+WF G+N AT + E A GG + + T+ + E + S+KP V
Sbjct: 378 KWFKENGEN-ATFKTAAEGAGLSVQQRGGKLAPLERQTLVDFQPEEIPSASDKPKMCIVP 436
Query: 497 RAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQ 556
RA I I+ + Y A P + N KV + +W C + + C RY++ A+I
Sbjct: 437 RASILTIREGTMWYCATP----EEGNNAKVEEENGQWYCAKNQKTYATCKRRYIMGAKIA 492
Query: 557 DQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSR--VFNQYLFRLKIK 614
D++G W+T F + GE++ G A E++ +++ D ++ I+R+ + F+LK K
Sbjct: 493 DESGSCWLTLFNDDGEKLFGHTADEMH--EFQENDSDKYDAILRAAQGAKKSFTFKLKSK 550
Query: 615 EELYGDEQRVKITVIRADQVNYSSESRYLL 644
E Y +E R K+ + + +++++ESR LL
Sbjct: 551 VEEYNNENRRKVLTMSMNPIDFAAESRSLL 580
>gi|323450756|gb|EGB06636.1| hypothetical protein AURANDRAFT_71962 [Aureococcus anophagefferens]
Length = 1589
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 151/448 (33%), Positives = 241/448 (53%), Gaps = 35/448 (7%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
I+ LNPYQ R+ IKARVTAKG +R +N G +FS DLLD GEIR T F V D+
Sbjct: 908 ISELNPYQQRFTIKARVTAKGPMRTWNKPTSSGNLFSVDLLDGS-GEIRGTFFKEVADKV 966
Query: 271 YEIIEVGRVYLI--SKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
+ ++E G+VY+ + G LKP+ K + + +E+E+ TV+ ++D +I + +
Sbjct: 967 FPLLEEGKVYVFQETSGRLKPSNKQYTSIPHEFEVTF-GNVTVE-PADDDGAIARIVGDW 1024
Query: 329 RHISEIESA----ENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVEL 383
+ IS E N VD++G++ + P+ I ++ G E +R + L D SG V L
Sbjct: 1025 KKISMFADGGGPREGN--VDIVGVIKAAFPAGQITSKRTGQELTKREVVLCDDSGYDVRL 1082
Query: 384 TLWGDFCNKEGQKLQEMVDVGFF---PVLSVKSGKVNDFSGKSIGTIPSTQL-FINPDFA 439
T WG+ + D FF PVL+ K +V+DF G S+ + +QL F +
Sbjct: 1083 TFWGELA---------LRDDAFFEAQPVLAAKGLRVSDFGGVSLSSGFGSQLIFDGQEDP 1133
Query: 440 EAHELREWF-DSGGKNAATVSISREIAAGGAKNEIHKTV--SQIKNEGLGRSEKPDWVTV 496
E+ LR W+ + GG+ A TV+++ GA + IK LG EKPD+VT
Sbjct: 1134 ESLRLRAWWTEGGGREAPTVALTGASGGSGAPAAFGDRIVLDDIKGRQLGFGEKPDYVTF 1193
Query: 497 RAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYRYLLQAQI 555
+ + F+K+D Y AC C KKV Q S W C++C EC RYL+ +
Sbjct: 1194 KGTLNFVKTDRLWYEAC----AQEGCQKKVVQNSDGTWHCEKCQATNAECKRRYLMSSTF 1249
Query: 556 QDQTGLTWVTAFQESGEEI-LGCPAKELYMLKYELQ-DDVRFGEIIRSRVFNQYLFRLKI 613
D + +WV+AF + +I LG A +L K E++ +D +F + ++ +F QY+ ++++
Sbjct: 1250 VDDSAQSWVSAFNDHATKIFLGVNADDLAAYKEEVENEDGKFEDYMKQFLFKQYVVKVRV 1309
Query: 614 KEELYGDEQRVKITVIRADQVNYSSESR 641
K E++ ++ RVK +++ ++Y +ESR
Sbjct: 1310 KSEVWQEQSRVKASIVDIFDLDYVAESR 1337
>gi|313234321|emb|CBY10388.1| unnamed protein product [Oikopleura dioica]
Length = 589
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 145/455 (31%), Positives = 242/455 (53%), Gaps = 30/455 (6%)
Query: 204 APARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCF 263
A R + + L PY +W IKARV KG L+ Y NA+G GK+F+F +D ++++ F
Sbjct: 147 ADGRYMSVMTLTPYMNKWCIKARVVQKGPLKEYQNAKGAGKLFAF-TVDDGTCNLKISAF 205
Query: 264 NAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPK 323
N VD+F+ I+E G+V IS G LKP +N +++E L +T++ ++ D IP+
Sbjct: 206 NDEVDKFFNIVEKGKVVTISNGQLKPKNAQYNSTNHDYECTLGRMTTIEEVMDDCDDIPQ 265
Query: 324 QQFSFRHISEIESAE-NNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRS-V 381
F+F IS+I S + VDV ++ V I + G + ++R L + D S + +
Sbjct: 266 MTFNFEPISKIISDRAKGAFVDVCAVINEVGAIDTINTRAGKQLEKRDLEIVDDSTKEKM 325
Query: 382 ELTLWG----DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPD 437
TLWG DF GQ V++VK+ V +F GK++ +++ + D
Sbjct: 326 RCTLWGQQAVDFSASRGQ------------VMAVKAASVGEFQGKTLSVGRDSEIIL--D 371
Query: 438 FAEAH--ELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVT 495
FAE H +L W+ G++AA S ++GG +NE+ S ++ +KP W
Sbjct: 372 FAEDHGQKLNVWWTQEGQDAAFEGQSGAGSSGGKRNEMVLLDSIMQGANYQTDDKPYWFN 431
Query: 496 VRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQ 554
+ ++T+IK + Y CP D++CNKK+ + + ++C++CNQ +YR ++QA
Sbjct: 432 SKCYLTYIKKERMMYKGCPGK-DDQKCNKKLIEEDDGMYRCEKCNQNFQNFNYRIMMQAA 490
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIK 614
+ D G + T F E+ E+ILG PA EL + D F + I ++ +++ + K
Sbjct: 491 VTDGRGQQYCTFFGETAEQILGKPADELGEMFN--SDGNEFDDFINTKSCLEFILGGRAK 548
Query: 615 EELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
E+Y DEQR+K+ R Q+++ ++Y LDL S+
Sbjct: 549 CEIYQDEQRLKVAAQRVAQIDF---NKYGLDLASR 580
>gi|384497733|gb|EIE88224.1| hypothetical protein RO3G_12935 [Rhizopus delemar RA 99-880]
Length = 409
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 147/441 (33%), Positives = 231/441 (52%), Gaps = 64/441 (14%)
Query: 18 VNSKPLVQVMDIKLI---GSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQ 74
+++ P+VQV++IK + GST RYR ++SD ++ AMLATQ V+ GQ+K+ S+++
Sbjct: 22 LSNNPIVQVINIKAVPVNGST--RYRAIVSDGINFMQAMLATQHTALVEQGQIKRNSIIR 79
Query: 75 LIDYICSTVQNRKIIVVLNMETIILDCEP-IGNPKIFSESELTAQKT------IPSNNLP 127
+ +Y+C+ + N+K++++L+++ + D E +G P + +A T ++
Sbjct: 80 INEYVCNLLSNKKVLIILSIDIMTTDVEAKVGTPVSLDPTSGSAANTPNTPTAAATSTTS 139
Query: 128 QPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPY 187
QP AP Q TFNS N S G F N
Sbjct: 140 QPKPSEPARAPE------QRQPTFNSTNSSS-----GGYFSGVNM--------------- 173
Query: 188 QPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFS 247
+ + + PI +NPYQ RW IKARVT K +++++N++GDGK+FS
Sbjct: 174 ---------------QLESSLTPIKNINPYQSRWTIKARVTLKSPIKQWHNSKGDGKLFS 218
Query: 248 FDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEA 307
+ LD GEI+ T FN VDR Y + E G VY +SK + A+K F+ L NE+E+ LEA
Sbjct: 219 VNFLD-QSGEIKATAFNDQVDRLYNMFEEGNVYYLSKARVTMARKQFSTLDNEYELTLEA 277
Query: 308 TSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK-NGMET 366
+ ++LC D +IP+ F I +++S E + VD +G+VI + I+ K G T
Sbjct: 278 GTEIELC-PSDAAIPQMNFKLVKIGDLDSVEKGATVDAMGVVIQDSGLNEIVTKATGKPT 336
Query: 367 QRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGT 426
+R L + D SG+SV LTLW K E D P+++ + +V+DF+G+S+
Sbjct: 337 NKRELTIVDESGKSVRLTLW--------DKTAEEFDSSDSPIVACRGLRVSDFNGRSLSL 388
Query: 427 IPSTQLFINPDFAEAHELREW 447
+ L NPD EA LR+W
Sbjct: 389 SSAGTLKKNPDIPEAQRLRQW 409
>gi|324505436|gb|ADY42337.1| Replication factor A 73 kDa subunit [Ascaris suum]
Length = 613
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 177/653 (27%), Positives = 297/653 (45%), Gaps = 74/653 (11%)
Query: 12 LINGGDVNSKPLVQVMDIKLIGS--TQERYRFLISDSV-STQHAMLATQLNDRVKTGQVK 68
L N + KP++Q++D + I + T +R+RF +SD V S +Q+ DRV+ ++
Sbjct: 16 LSNDDNCPEKPVLQILDARPIKNNPTDKRHRFRLSDGVFSYSTCTNQSQIADRVEADKLG 75
Query: 69 KGS-VVQLIDYICSTV-------QNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKT 120
+G V++++ Y+ V Q + + +++ E + D +G P
Sbjct: 76 EGHPVIRILRYLKQAVPKSDKVPQGKISLAIIDYEVLARDLPILGQP------------- 122
Query: 121 IPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQ 180
+P +Y N+ Q+ Q G Q
Sbjct: 123 -----IPHSCNERDYRGMNANAIG-QSVSHVQPQGNG----------------------Q 154
Query: 181 PTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAR 240
P PP R I +N P R+I PY +W I VTAK DLR AR
Sbjct: 155 PQYIARRNPPTPNRATSLIGQNLTPIRLI-----TPYVNKWRICGVVTAKEDLRDVKTAR 209
Query: 241 GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNE 300
G+ KVF+F++ D +GG IR+ F D+FY I++ G +Y IS G++K A K +N ++
Sbjct: 210 GELKVFNFEVTDEEGGCIRIAAFGDTADKFYAIVQKGSMYYISGGTVKQANKRYNTTGHD 269
Query: 301 WEIFLEATSTVDLCTE-EDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPIL 359
+E+ + + + + C + E P+ + ++ + S+ +D+I I+ V+ +
Sbjct: 270 YELTMRSDTEISPCIDRERIEEPRLNLNVVPLAMV-SSRAGQCIDIIAIIDQVSELQQVT 328
Query: 360 -RKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVND 418
R G ++R L+L D SG V LTLWG+ LQ + VK V +
Sbjct: 329 QRSTGALLEKRDLHLIDESGAVVVLTLWGEQARSHDVDLQHQ-------AVGVKGASVRE 381
Query: 419 FSGK-SIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTV 477
F+G S+ + ST++ INPD E+ L W+ + I+ G + + +
Sbjct: 382 FNGSYSLSALNSTRIEINPDCDESKALYVWYREKRPSIDVKRITTGSMGGDSYARDLRLI 441
Query: 478 SQIKNEGLGRSE-KPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCD 536
LGR+E K + V A I+ +K+D Y +C G C KKV + N+++C+
Sbjct: 442 GIADAMNLGRNEDKGAYFNVTAMISSLKADGALYKSC----GTNGCKKKVIEMDNQYRCE 497
Query: 537 RCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFG 596
+CN +D Y LL ++ D +G WVT F+E ++LG A EL L + D +
Sbjct: 498 KCNLTLDSFKYVLLLSMELSDFSGSHWVTVFEEKATKLLGKTAAELGDLLESNRLD-EYN 556
Query: 597 EIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
++ + F +Y FR++ K E Y D +R+K +V + V+Y L ++K
Sbjct: 557 DVFSAVRFREYTFRIRAKSEFYNDTERIKWSVFELNNVDYDKYVEELTKAVTK 609
>gi|114145419|ref|NP_001041308.1| replication protein A 70 kDa DNA-binding subunit [Rattus
norvegicus]
gi|33086646|gb|AAP92635.1| Cb1-727 [Rattus norvegicus]
Length = 680
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 151/453 (33%), Positives = 248/453 (54%), Gaps = 57/453 (12%)
Query: 16 GDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQVKKGSV 72
GD + KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ GQ+ V
Sbjct: 4 GDTSIKPVLQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNALVEGGQLASNCV 63
Query: 73 VQLIDYICSTVQN-RKIIVVLNMETIILDCE---PIGNPKIFSESELTAQKTIPSNNLPQ 128
Q+ +I +T+++ R++++++++E + E IGNP ++E AQ+ S
Sbjct: 64 CQVHRFIVNTLKDGRRVVILMDLEVVKSAGEVGVKIGNPVPYNEGH--AQQQAVSAPASA 121
Query: 129 PVRVNNYSAPNSGTFNLQNS--GTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPP 186
+ P +G+ + ++ + + P F P P +G+
Sbjct: 122 ATPPASKPQPQNGSLGVGSTVAKAYGASKP--FGKPAGTGLLQPTSGT------------ 167
Query: 187 YQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVF 246
++++PIA+L PYQ +W I ARVT K +R ++N+RG+GK+F
Sbjct: 168 ------------------QSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLF 209
Query: 247 SFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLE 306
S +L+D + GEIR T FN VD+F+ +IEV +VY SKG+LK A K F+ +KN++E+
Sbjct: 210 SIELVD-ESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFSAVKNDYEMTFN 268
Query: 307 ATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGME 365
++V C E+ +P QF F I ++ES +S+VD+IGI S + I ++ N E
Sbjct: 269 NETSVLPC-EDGHHLPTVQFDFTGIGDLESKSKDSLVDIIGICKSYEDATKITVKSNNRE 327
Query: 366 TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIG 425
+R + L D SG+ V TLWG+ +K Q PV+++K +V+DF G+S+
Sbjct: 328 VAKRNICLMDMSGKVVTATLWGEDADKFDGSRQ--------PVMAIKGARVSDFGGRSLS 379
Query: 426 TIPSTQLFINPDFAEAHELREW---FDSGGKNA 455
+ S+ + +NPD EA++LR W F GG A
Sbjct: 380 VLSSSTVLVNPDIPEAYKLRGWHYVFGDGGLKA 412
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 114/216 (52%), Gaps = 12/216 (5%)
Query: 443 ELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFIT 501
+L FDS G+ VSIS + G G N KT+ + K+E LG+ +K D+ + A +
Sbjct: 468 QLMWGFDSEGQALDGVSISDLRSGGTGGSNTNWKTLYEAKSENLGQGDKADYFSTVATVV 527
Query: 502 FIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTG 560
F++ ++ Y ACP + CNKKV Q ++C++C++E YR +L I D
Sbjct: 528 FLRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNIADFQE 583
Query: 561 LTWVTAFQESGEEILGCPAKELYMLKYEL------QDDVRFGEIIRSRVFNQYLFRLKIK 614
WVT FQES E ILG L LK ++ ++ F E+ ++ F + FR+++K
Sbjct: 584 NQWVTCFQESAEAILGQNTVYLGELKEKVGCVFVSMNEQAFEEVFQNANFRSFTFRIRVK 643
Query: 615 EELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
E Y DE R+K TVI V+Y S+ L+ I K+
Sbjct: 644 LETYNDESRIKATVIDVKPVDYRDYSKRLIMNIRKN 679
>gi|71756127|ref|XP_828978.1| replication factor A 51kDa subunit [Trypanosoma brucei TREU927]
gi|70834364|gb|EAN79866.1| replication factor A, 51kDa subunit, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|261334907|emb|CBH17901.1| replication factor A, 51kDa subunit, putative [Trypanosoma brucei
gambiense DAL972]
Length = 463
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 141/432 (32%), Positives = 239/432 (55%), Gaps = 33/432 (7%)
Query: 213 ALNPY-QGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFY 271
+L+P+ G+W I+ARVT K ++R +N GK+FSF L+D + IR T FN VD F
Sbjct: 14 SLSPFLGGKWWIRARVTDKSEIRTWNKPTSQGKLFSFTLID-ESASIRATVFNEAVDMFN 72
Query: 272 EIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE-EDDSIPKQQFSFRH 330
+I G+VY S G +K A + F+++ N++E+ + T + + SIP Q+++F
Sbjct: 73 PLIVNGQVYYFSGGQVKNANRKFSNVNNDYELSFDNTCQISAARDVVSSSIPLQRYNFVP 132
Query: 331 ISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTLWGDF 389
I+ ++ E S+VDV+ +V++V I+ R G E RR + + D++ +++TLW
Sbjct: 133 IAILKQREVGSLVDVLAVVLNVEELGTIVQRSTGRELVRRTVKVADSTA-GIDVTLW--- 188
Query: 390 CNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFD 449
N+ ++ VL+++ KV F G ++ T + +NP+ + +LREWF+
Sbjct: 189 -NENAKEWPHQPGT----VLAMRQLKVGSFDGVTLSTTMQSSFDVNPNIPDVKKLREWFE 243
Query: 450 S-GGKNAATVSI----SREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIK 504
S GG++ +++S+ + +A+ G +K + I EGLG+ KPD++ +R ++K
Sbjct: 244 STGGRDVSSLSMQGNNALGLASSGETYRGYKYIDDITTEGLGKGPKPDYIDLRCVPVYLK 303
Query: 505 SDSFCYTACPLMIGDRQCNKKVT---QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGL 561
D+ Y ACP QCNKKV G+R++C++C+Q I RYL+ Q+ D
Sbjct: 304 QDTQWYDACP------QCNKKVMLEGAMGDRFRCEKCDQSIVPTQ-RYLVSIQVTDNVSQ 356
Query: 562 TWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYG-- 619
W+T F ESG E G A EL + + +D + ++ + R+ L RL++KEE G
Sbjct: 357 VWLTLFNESGAEFFGMTAPELK--RRQEEDPMFVTKVAQMRMNRPVLMRLRVKEEGLGGN 414
Query: 620 -DEQRVKITVIR 630
D +RV++ V+R
Sbjct: 415 EDSERVRLNVVR 426
>gi|240274193|gb|EER37711.1| replication factor A 1 [Ajellomyces capsulatus H143]
Length = 541
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 183/635 (28%), Positives = 290/635 (45%), Gaps = 131/635 (20%)
Query: 20 SKPLVQVMDIKLIG---STQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLI 76
++P+VQ + +K + ++ ER+R + SD + ML TQ N V +GQ+ +G V+L
Sbjct: 25 AEPVVQCVQVKPLPPQPNSPERFRAVFSDITNYVQTMLGTQANHYVTSGQLVRGCFVRLK 84
Query: 77 DYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYS 136
+ + ++ ++I+ II D E + I +K I PQP+
Sbjct: 85 SFQANMIKGKRIL-------IIFDLEVLDRLGI-------CEKKIGD---PQPLDTKQEE 127
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNH 196
+ + ++G + S+ G P R+ A + +
Sbjct: 128 QDKTIPTTISSNGFYGSR--GPQQPPQQPAQRSAAAATAHAN------------------ 167
Query: 197 GPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGG 256
I PI AL+PY +W IKAR T K ++ ++N G+GK+FS +LLD D G
Sbjct: 168 -----------IYPIEALSPYSHKWTIKARCTNKSAIKTWHNKNGEGKLFSVNLLD-DSG 215
Query: 257 EIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE 316
EIR T F D Y + E EA +T+D
Sbjct: 216 EIRATAFKDQCDSLYGVFEE-----------------------------EAGTTID---- 242
Query: 317 EDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILNLKD 375
VIG++ V IL K + +R L L D
Sbjct: 243 ----------------------------VIGVLKDVGELSQILSKTTSKPYDKRDLTLVD 274
Query: 376 TSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFIN 435
+G SV LT+WG+ KE + E V++ K KV+DF+G+S+ + S + ++
Sbjct: 275 NTGYSVRLTVWGNIA-KEFDSVPE-------SVVAFKGVKVSDFNGRSLSLLSSGSMTVD 326
Query: 436 PDFAEAHELREWFDSGGKNAATVSI-SREIAAG-GAKNEIHKTVSQIKNEGLGRSEKPDW 493
PD +AH+L+ W+D+ G++ S S AAG G + KT+ Q+ LG SEKPD+
Sbjct: 327 PDIEDAHKLKGWYDAQGRSETFASHDSMNNAAGFGDRASSFKTIVQVHEGNLGMSEKPDY 386
Query: 494 VTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQ 552
+V+A + ++K D+ Y AC + D+ CNKKV Q N +W+C+RC+Q +YRY+L
Sbjct: 387 FSVKATVVYVKQDTMAYPAC---LTDK-CNKKVLQDENGQWRCERCDQSFPHPEYRYILS 442
Query: 553 AQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLK 612
+ D TG W++ F E G+ ILG A EL LK D+ + E+++ + F +
Sbjct: 443 VNVCDHTGALWLSCFDEVGKIILGTSANELMELKE--NDERAYEELVQRANCRAWNFNCR 500
Query: 613 IKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
K + + D+QRV+ V ++YS ES L +LI
Sbjct: 501 AKMDNFQDQQRVRYQVSSVSAIDYSVESARLAELI 535
>gi|290999555|ref|XP_002682345.1| single-stranded DNA-binding replication protein A large subunit
[Naegleria gruberi]
gi|284095972|gb|EFC49601.1| single-stranded DNA-binding replication protein A large subunit
[Naegleria gruberi]
Length = 598
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 131/446 (29%), Positives = 236/446 (52%), Gaps = 27/446 (6%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
PI+ LNPY W IKARVT K D++ ++ G +FS +LLD GG+IR T FN V +
Sbjct: 167 PISNLNPYDKVWVIKARVTQKSDMKHWDKGTSKGSLFSIELLDEYGGQIRATFFNDVAKK 226
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFR 329
+Y+ I+ VY S G LK A + F + + +EI + + + D IP F+
Sbjct: 227 YYDAIKERSVYFFSGGKLKDANRKFTTIPHPYEITFDRDTVIQ--NARDSEIPTDTFNCT 284
Query: 330 HISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGR---SVELTLW 386
+ ++ + E+N I+DV G+V ++ + KN +T+R ++L D S +V+LT+W
Sbjct: 285 RLCDMTNVEDNMILDVAGVVQNIGETKEFTTKNNRKTKRCNISLIDDSSSPFCTVDLTIW 344
Query: 387 GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELRE 446
GD C+ D+ V+ +KS + +++ G S+ TI ST++F +P +L E
Sbjct: 345 GDMCDTH--------DMQQGDVVILKSVRKSNYGGVSLNTINSTRIFKDPGIPIYQQLSE 396
Query: 447 WF--DSGGKNAATVSISREIAAGGAKNEIHK--TVSQIKNEGLGRSEKPDWVTVRAFITF 502
W+ + G + + ++++ AA ++ + ++ KN + PD++T+RA++++
Sbjct: 397 WYQNNEGSFDGEGIKLTQKQAAVNSERTFKRKNVIADCKNMSVDTVTAPDYLTIRAYVSY 456
Query: 503 IKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLT 562
IK + + Y AC +++CNKKV Q+ + C CN D C ++L I D TG
Sbjct: 457 IKHELW-YDACT----NKECNKKVQQNEGIYHCSSCNHSSDTCTRKFLANLGITDWTGKQ 511
Query: 563 WVTAFQESGEEILG-CPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDE 621
+ AF ++ E++ A ++ E + ++ + F +Y+F +++ E E
Sbjct: 512 YCNAFNQAVEKLFSDMTADDMCARAAEPE---YMPYLLGEKTFTRYVFTVRVTTET-TKE 567
Query: 622 QRVKITVIRADQVNYSSESRYLLDLI 647
++K T+IR ++Y+ E++ +L LI
Sbjct: 568 PKLKFTIIRVTPIDYAREAKSILSLI 593
>gi|156089527|ref|XP_001612170.1| replication factor-a protein 1 (rpa1) family protein [Babesia
bovis]
gi|154799424|gb|EDO08602.1| replication factor-a protein 1 (rpa1) family protein [Babesia
bovis]
Length = 684
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 168/535 (31%), Positives = 263/535 (49%), Gaps = 48/535 (8%)
Query: 136 SAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSF-QPTVQPPYQPPPNFR 194
S P+S T N S + P SFS +S N G I + Q ++ P P
Sbjct: 174 SMPSSNTINTSTSYAQSHHAPTSFSHDSS-----TNHGPIRNTDDQLMLKKPQSAPYATN 228
Query: 195 NHGPILK--NEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLD 252
P++K + + I IA L Y +W+I+ARV K ++++NN G+G++FS DL D
Sbjct: 229 TSKPVVKVGDGNNSGYISIADLTIYTPKWSIRARVLNKTHIKKFNNQWGEGQLFSVDLCD 288
Query: 253 SDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVD 312
+ G+IR T F V ++Y IE G+VY IS G L+PA K FN L + E+ L+ S +
Sbjct: 289 -NSGDIRATLFGEAVTKWYNFIEEGQVYSISGGQLRPANKKFNSLSHACEMSLDENSQI- 346
Query: 313 LCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRIL 371
L +D SIP + +F I ++E + I+DVIG+V N K+ G + +R +
Sbjct: 347 LLDRDDQSIPLIRCNFVPIKQVERLSSGDIIDVIGVVARFNDIKSYQSKSTGTTSDKREI 406
Query: 372 NLKDTSGRSVELTLWGDFCNKEGQKLQEMV--DVGFFPVLSVKSGKVNDFSGKSIGTIPS 429
L D+SG SV +TLW +K+Q+ + ++ P++++K +VN++ GK + TI +
Sbjct: 407 LLCDSSGSSVWVTLW-------NKKVQQFLTSELETHPIIAMKGVRVNEWQGKKLDTIGT 459
Query: 430 TQLFINPDFAEAHELREWFDSGGK----NAATVSIS---REIAAGGAKNEIHKTVSQIKN 482
T + INP E +L+ W+ + G +A SI +I + GA + Q K
Sbjct: 460 THITINPAVPEVAKLKNWWATEGSQMQFDAGRSSIDNNIEDIISIGALTQAANQAYQFK- 518
Query: 483 EGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEI 542
LG S T R + I+ ++F + AC +C +K+ +W C RC +
Sbjct: 519 -ALGDSGIT--FTARGMVEVIRENTFSWPACI------ECQRKMVNELGQWVCSRC-KCT 568
Query: 543 DECDYRYLLQAQIQDQTGLTWVTAFQESGEEIL-GCPAKELYMLKYELQ---DDVRFGEI 598
+ + Y+L +I D TG W TA G+EI+ G PA E+ L D F I
Sbjct: 569 RQPRHTYILSMKISDDTGHLWATASSIVGDEIMNGIPAAEVLALAGNNDINVDGKNFMNI 628
Query: 599 IRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSFRK 653
+Y+F++K+ E Y DE R+K V +A ++ R LD + K K
Sbjct: 629 FEEARLTEYIFKIKVYTETYMDEPRIKYRVTKAIKL------RRCLDTVIKCLIK 677
>gi|402592315|gb|EJW86244.1| hypothetical protein WUBG_02846 [Wuchereria bancrofti]
Length = 613
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 174/642 (27%), Positives = 304/642 (47%), Gaps = 69/642 (10%)
Query: 21 KPLVQVMDIK-LIGSTQER------YRFLISDSVSTQHAML-ATQLNDRVKTGQVKKGSV 72
+P++QV++ + L+ S E +RF ISD + + ++ L + +R+KT + +G+
Sbjct: 24 RPVIQVLEARPLVNSQAESASEAQYFRFRISDGMFSYNSCLNQASITERIKTDALDQGNP 83
Query: 73 VQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRV 132
V I Y T Q + ++ +++ E + D GNP + + P R
Sbjct: 84 VLRIKYTIKTAQ-KPLLRIMDYEILGRDLPVFGNP-------------VHHSGNPSDYRG 129
Query: 133 NNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPN 192
N PN+ N + S GS ++ + R +GS R
Sbjct: 130 LN---PNANMHNTRLE--LRSPQKGSSTSGQNAPLRC--SGSSSRR-------------- 168
Query: 193 FRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLD 252
L N + PI + PY +W I VTAK DLR R D KVF+F+L D
Sbjct: 169 -------LANLVGQNLTPIKLITPYVNKWRICGVVTAKEDLRNIRTVRRDMKVFNFELTD 221
Query: 253 SDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVD 312
+GG IR+ F+ V + FY II+ G ++ +S G++K A K FN +++EI + + S V
Sbjct: 222 EEGGCIRIAAFDDVAEEFYSIIQKGSMFYVSGGTVKQANKRFNTTGHDYEITIRSDSEVS 281
Query: 313 LCTE-EDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRI 370
C + E PK S + + + SI D+I IV VN + + +N G + ++R
Sbjct: 282 PCLDREKIEQPKLSLSIVRLCNVANHVGESI-DIIAIVEKVNDIMQVTARNTGTQLEKRD 340
Query: 371 LNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGTIPS 429
+ L DTS + LT WG+ ++++ + +K V +F+G S+ T S
Sbjct: 341 IVLIDTSETEITLTFWGEQARLYDKEIEGQ-------TIGIKGTFVKEFNGNLSLSTASS 393
Query: 430 TQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGR-S 488
+++ +N D AE L +W+ + +++ + + + + GLGR S
Sbjct: 394 SRIELNMDCAETASLYKWYRETRPSVQARNLTTTGLTADSYGRDLRIIRLSEFCGLGRDS 453
Query: 489 EKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYR 548
EK + A I+ +K+D Y +C G C KKV + N+++C++C+ +D+ Y
Sbjct: 454 EKGTLFNITAMISSLKADGALYKSC----GTNGCKKKVIEINNQYRCEKCDITLDKYKYV 509
Query: 549 YLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL-YMLKYELQDDVRFGEIIRSRVFNQY 607
L+ +I D +G WVT F++ ++L A++L +L +L D+ + E+ + F +Y
Sbjct: 510 LLMTMEISDFSGSHWVTVFEDKAVKLLKSDAEQLGQLLDNDLLDE--YNEVFNAVRFREY 567
Query: 608 LFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
FR++ K E Y E+++K +V ++VN+ L +SK
Sbjct: 568 TFRIRAKSEFYNGEEKIKWSVFDINEVNHDKYIDELTRAVSK 609
>gi|154340545|ref|XP_001566229.1| putative replication factor A, 51kDa subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134063548|emb|CAM39729.1| putative replication factor A, 51kDa subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 467
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 243/442 (54%), Gaps = 37/442 (8%)
Query: 207 RIIPIAALNPY-QGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
+I PI +L P+ G+W I+ARVT K D+R +N GK+FSF L+D + IR T FN
Sbjct: 8 QIQPIDSLTPFLGGKWWIRARVTDKTDIRTWNKPTSQGKLFSFTLID-ESAAIRATVFND 66
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDS--IPK 323
VD F +I G+VY S G +K A + F+++ N++E+ + +S + L ++ + +P
Sbjct: 67 AVDTFEPLIVNGQVYYFSGGQVKNANRRFSNVNNDYELTFDRSSEIMLARQDTSTAALPM 126
Query: 324 QQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSGRSVE 382
Q+++F I ++ E S+VDV+G+V+ V+ I +K+ G E +R + + D + +VE
Sbjct: 127 QRYNFVPIELLKQREVGSLVDVLGVVLKVDDVSSITQKSTGRELVKRNVKMGDMTA-AVE 185
Query: 383 LTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP-DFAEA 441
+T W D G VG V++++ KV F G ++ + T++ +NP D +
Sbjct: 186 VTFWNDEAQTWGYP------VG--TVVALRQLKVGSFDGVTLSSTYQTKIDVNPTDLPDV 237
Query: 442 HELREWF-DSGGKNAATVS---ISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVR 497
+L W+ +GG N ++S + AGG + K + +I++EG+GR KP++V VR
Sbjct: 238 KKLATWYVSTGGANVTSLSSQGLGAINGAGGENDRGRKYLDEIQSEGIGRGLKPEYVDVR 297
Query: 498 AFITFIKSDSFCYTACPLMIGDRQCNKKVTQS---GNRWQCDRCNQEIDECDYRYLLQAQ 554
+ K D+ Y ACP CNKKVT+ G+R++C++C++ + RYL+ Q
Sbjct: 298 CVPIYFKQDAQWYDACP------TCNKKVTEEGAQGDRFRCEKCDKTVTPTQ-RYLVSIQ 350
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIK 614
+ D W+T F E+G E G A EL E D + ++ + R+ + RL++K
Sbjct: 351 VTDNVSQAWLTLFNEAGIEFFGMEAAELKRRAQE--DPLYIAKLAQGRMNRPVVMRLRVK 408
Query: 615 EE-----LYGDEQ-RVKITVIR 630
EE + G+E R++++V+R
Sbjct: 409 EETSSNAMTGEESDRLRMSVVR 430
>gi|303290622|ref|XP_003064598.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454196|gb|EEH51503.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 541
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 237/453 (52%), Gaps = 26/453 (5%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
IA+LNPY G W IKA++ +KG +R + NARG+G+V + +L+D +G I+ T + +D++
Sbjct: 95 IASLNPYTGNWTIKAKLASKGAVRTFRNARGEGRVCTIELVDDNGTAIQATMWKDAIDKY 154
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD-SIPKQQFSFR 329
I+EVG+VY +S+GSL+PA + ++++ N++E+ L+ + C + D S + +
Sbjct: 155 DAIMEVGKVYYVSRGSLRPANRQYSNVNNDYEMSLDGKCDISPCEDPCDVSKMSRAYELV 214
Query: 330 HISEIESA-ENNSIVDVIGIVISVNPSVPILRK-NGMETQRRILNLKDTSGRSVELTLWG 387
I + + VDV+ V +V I RK + E Q R + L D + ++V LTLWG
Sbjct: 215 AIDALPTKIGTRGSVDVLACVAAVGELRAIRRKSDDSEVQVRDITLLDDTKKTVSLTLWG 274
Query: 388 DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPD----FAEAHE 443
+ ++G++L + V++++ +V D++G S+ T+ ++L + P A+A
Sbjct: 275 ELATEQGERLANEIGA----VVALRGLRVTDYNGVSLSTVQRSELIVEPSGDDIAAKADA 330
Query: 444 LREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDW-------VTV 496
LR W+ + G A T + +A ++ + P +
Sbjct: 331 LRAWYAAEGSTAETTAAGAGLATARGGAGAGAPAQRVDLKAFQPELLPPATNKYEVGILG 390
Query: 497 RAFITFIKSDS-FCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQ 554
A + +K D Y ACP + NKKV +S +W C+ + D C RY+L+ +
Sbjct: 391 CATVVLVKPDQPMYYCACP----EEGNNKKVVEESPGKWYCEATQKTYDSCRRRYILRLK 446
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIK 614
+ D G WV F E ++LGC A+EL+ L+ + + +++ F + +LK K
Sbjct: 447 VSDHAGGGWVNVFHEQACQMLGCDAEELHALRE--SNPAAYERKVKAAQFKPWGLKLKSK 504
Query: 615 EELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
E Y EQ+ ++TV+ V+Y++E+++LL LI
Sbjct: 505 TEEYQGEQKRRLTVLTCAPVDYAAEAKHLLSLI 537
>gi|47227767|emb|CAG08930.1| unnamed protein product [Tetraodon nigroviridis]
Length = 416
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/452 (31%), Positives = 231/452 (51%), Gaps = 80/452 (17%)
Query: 33 GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQN-RKIIV 90
G+ RYR ++SD T + ML+TQLN ++ + + + L ++ + +++ R++++
Sbjct: 8 GNGPTRYRVMMSDGRHTLSSFMLSTQLNYLIEENTLAQNCICVLKRHVTNILKDGRRVVI 67
Query: 91 VLNMETIILDCE---PIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQN 147
+L ++ I E IG+P ++E A + +NLP F N
Sbjct: 68 ILEIDVIKRAEEVAGKIGDPTPYTE----AVWEVTVSNLP---------------FR-SN 107
Query: 148 SGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQP----PPNFRNHGPILKNE 203
T N P P++ PP Q +F GP
Sbjct: 108 ESTANGTKP---------------------RLSPSLTPPEQKRKGFSKDFGKKGPSAMPS 146
Query: 204 AP---ARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRV 260
P ++++PIA+LNPYQ +W I+AR+T K +R ++NARG+GK+FS +++D + GEIR
Sbjct: 147 TPGGGSKVVPIASLNPYQSKWTIRARITNKSSIRTWSNARGEGKLFSMEMVD-ESGEIRT 205
Query: 261 TCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDS 320
T FN VD+F+ +IEVG+VY ISK +LK A K + +KN++E+ L ST+ C + D
Sbjct: 206 TGFNQEVDKFFSLIEVGKVYYISKCTLKIANKQYTSVKNDYEMTLNGESTIIPCEDSCD- 264
Query: 321 IPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRS 380
+P Q F IS++E+ E ++IVDVIG+ SV+ + + ++ E +R L+L D SG+
Sbjct: 265 VPLVQCDFVSISDLENKEKDAIVDVIGVCKSVDEATRLTTRSNREVSKRTLHLMDMSGKL 324
Query: 381 VELTLWGDFCNK-------------------------EGQKLQEMVDVGFFPVLSVKSGK 415
V +TLWG+ +L E D PV+++K K
Sbjct: 325 VTVTLWGEEVRTVRGTSVRRSFTLLNIRMKTATRFPGRMNRLAENFDGSGEPVVAIKGAK 384
Query: 416 VNDFSGKSIGTIPSTQLFINPDFAEAHELREW 447
++DF G+S+ S+ L INPD EA++LR W
Sbjct: 385 LSDFGGRSLSASFSSTLMINPDIPEAYKLRGW 416
>gi|71664069|ref|XP_819019.1| replication factor A, 51kDa subunit [Trypanosoma cruzi strain CL
Brener]
gi|70884302|gb|EAN97168.1| replication factor A, 51kDa subunit, putative [Trypanosoma cruzi]
Length = 465
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 147/452 (32%), Positives = 246/452 (54%), Gaps = 39/452 (8%)
Query: 200 LKNEAPARIIPIAALNPY-QGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEI 258
+++ + +I PI +L P+ G+W I+ARVT K D+R +N GK+FSF L+D + I
Sbjct: 1 MQHPSNQQIQPIDSLTPFLGGKWWIRARVTDKSDVRTWNKPTSQGKLFSFTLID-ESASI 59
Query: 259 RVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE-E 317
R T FN VD F +I G+VY +S G +K A + F+++ N++E+ +++S + L +
Sbjct: 60 RATVFNDAVDLFNPLIVNGQVYYLSGGQVKNANRKFSNVNNDYELTFDSSSQISLARDPS 119
Query: 318 DDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDT 376
+IP Q+++F I+ ++ E S+VDV+ +V+SV I +K+ G E +R + + D
Sbjct: 120 SATIPLQRYNFLPIAILKQREVGSLVDVLAVVLSVEELSSITQKSTGRELIKRNVKVGDI 179
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFP--VLSVKSGKVNDFSGKSIGTIPSTQLFI 434
+ +VE+TLW D + + + P VL+++ KV F G ++ + +
Sbjct: 180 TA-AVEVTLWND----------QAKEWAYSPGTVLAMRQLKVGSFDGVTLSATFQSAFDV 228
Query: 435 NPDFAEAHELREWF-DSGGKNAATVSISREIAAGGAKNEIH---KTVSQIKNEGLGRSEK 490
NP+ + +L EW+ +GG++ +++S A A E + K I EGLGR K
Sbjct: 229 NPNIPDVKKLAEWYISTGGRDVSSLSSLGVGAGNNAGGENYRGRKYFDDISAEGLGRGPK 288
Query: 491 PDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT---QSGNRWQCDRCNQEIDECDY 547
D++ VR ++K D+ Y ACP QCNKKVT G R++C++C++++
Sbjct: 289 ADFIDVRCVPVYLKQDAQWYDACP------QCNKKVTLEGAQGERYRCEKCDRQVVPTQ- 341
Query: 548 RYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQY 607
RYL+ Q D W+T F E+G E G PA EL K + D + +I + R+
Sbjct: 342 RYLVSIQASDNVSQKWLTLFNEAGVEFFGMPATELK--KQQEADPMFVTKIAQLRMNRPV 399
Query: 608 LFRLKIKEE----LYGDEQ--RVKITVIRADQ 633
RL++KEE G E+ RV++TV+R ++
Sbjct: 400 QMRLRVKEESSSSAAGGEESDRVRLTVMRLNE 431
>gi|407420060|gb|EKF38438.1| replication factor A, 51kDa subunit, putative [Trypanosoma cruzi
marinkellei]
Length = 465
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 147/452 (32%), Positives = 246/452 (54%), Gaps = 39/452 (8%)
Query: 200 LKNEAPARIIPIAALNPY-QGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEI 258
+++ + +I PI +L P+ G+W I+ARVT K D+R +N GK+FSF L+D + I
Sbjct: 1 MQHPSNQQIQPIDSLTPFLGGKWWIRARVTDKSDVRTWNKPTSQGKLFSFTLID-ESASI 59
Query: 259 RVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE-E 317
R T FN VD F +I G+VY +S G +K A + F+++ N++E+ +++S + L +
Sbjct: 60 RATVFNDAVDLFNPLIVNGQVYYLSGGQVKNANRKFSNVNNDYELTFDSSSQISLARDPS 119
Query: 318 DDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDT 376
+IP Q+++F I+ ++ E S+VDV+ +V+SV I +K+ G E +R + + D
Sbjct: 120 SATIPLQRYNFVPIAILKQREVGSLVDVLAVVLSVEELSSITQKSTGRELVKRNVKVGDI 179
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFP--VLSVKSGKVNDFSGKSIGTIPSTQLFI 434
+ +VE+TLW D + + + P VL+++ KV F G ++ + +
Sbjct: 180 TA-AVEVTLWND----------QAKEWTYSPGTVLAMRQLKVGSFDGVTLSATFQSAFDV 228
Query: 435 NPDFAEAHELREWF-DSGGKNAATVSISREIAAGGAKNEIH---KTVSQIKNEGLGRSEK 490
NP+ + +L EW+ +GG++ +++S A A E + K I EGLGR K
Sbjct: 229 NPNIPDVKKLAEWYISTGGRDVSSLSSLGVGAGNNAGGENYRGRKYFDDISAEGLGRGPK 288
Query: 491 PDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT---QSGNRWQCDRCNQEIDECDY 547
D++ VR ++K D+ Y ACP QCNKKVT G R++C++C++++
Sbjct: 289 ADFIDVRCVPVYLKQDAQWYDACP------QCNKKVTLEGAQGERYRCEKCDRQVVPTQ- 341
Query: 548 RYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQY 607
RYL+ Q D W+T F E+G E G PA EL K + D + +I + R+
Sbjct: 342 RYLVSIQASDNVSQKWLTLFNEAGVEFFGMPATELK--KQQEADPMFVTKIAQMRMNRPV 399
Query: 608 LFRLKIKEE----LYGDEQ--RVKITVIRADQ 633
RL++KEE G E+ RV++TV+R ++
Sbjct: 400 QMRLRVKEESSSSAAGGEESDRVRLTVMRLNE 431
>gi|407853189|gb|EKG06272.1| replication factor A, 51kDa subunit, putative [Trypanosoma cruzi]
Length = 465
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 147/452 (32%), Positives = 246/452 (54%), Gaps = 39/452 (8%)
Query: 200 LKNEAPARIIPIAALNPY-QGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEI 258
+++ + +I PI +L P+ G+W I+ARVT K D+R +N GK+FSF L+D + I
Sbjct: 1 MQHPSNQQIQPIDSLTPFLGGKWWIRARVTDKSDVRTWNKPTSQGKLFSFTLID-ESASI 59
Query: 259 RVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE-E 317
R T FN VD F +I G+VY +S G +K A + F+++ N++E+ +++S + L +
Sbjct: 60 RATVFNDAVDLFNPLIVNGQVYYLSGGQVKNANRKFSNVNNDYELTFDSSSQISLARDPS 119
Query: 318 DDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDT 376
+IP Q+++F I+ ++ E S+VDV+ +V+SV I +K+ G E +R + + D
Sbjct: 120 SATIPLQRYNFVPIAILKQREVGSLVDVLAVVLSVEELSSITQKSTGRELIKRNVKVGDI 179
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFP--VLSVKSGKVNDFSGKSIGTIPSTQLFI 434
+ +VE+TLW D + + + P VL+++ KV F G ++ + +
Sbjct: 180 TA-AVEVTLWND----------QAKEWAYSPGTVLAMRQLKVGSFDGVTLSATFQSAFDV 228
Query: 435 NPDFAEAHELREWF-DSGGKNAATVSISREIAAGGAKNEIH---KTVSQIKNEGLGRSEK 490
NP+ + +L EW+ +GG++ +++S A A E + K I EGLGR K
Sbjct: 229 NPNIPDVKKLAEWYISTGGRDVSSLSSLGVGAGNNAGGENYRGRKYFDDISAEGLGRGPK 288
Query: 491 PDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT---QSGNRWQCDRCNQEIDECDY 547
D++ VR ++K D+ Y ACP QCNKKVT G R++C++C++++
Sbjct: 289 ADFIDVRCVPVYLKQDAQWYDACP------QCNKKVTLEGAQGERYRCEKCDRQVVPTQ- 341
Query: 548 RYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQY 607
RYL+ Q D W+T F E+G E G PA EL K + D + +I + R+
Sbjct: 342 RYLVSIQASDNVSQKWLTLFNEAGVEFFGMPATELK--KQQEADPMFVTKIAQLRMNRPV 399
Query: 608 LFRLKIKEE----LYGDEQ--RVKITVIRADQ 633
RL++KEE G E+ RV++TV+R ++
Sbjct: 400 QMRLRVKEESSSSAAGGEESDRVRLTVMRLNE 431
>gi|359475570|ref|XP_003631705.1| PREDICTED: LOW QUALITY PROTEIN: replication factor A protein 1-like
[Vitis vinifera]
Length = 389
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 135/388 (34%), Positives = 219/388 (56%), Gaps = 24/388 (6%)
Query: 275 EVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEI 334
++G+VY I KG+LK A K F ++N++ + L S V+ + E+ IP+ +F F I E+
Sbjct: 8 QLGKVYYIXKGALKVANKQFKTVQNDYGMTLNENSEVEEASNEETFIPEAKFKFLXIEEL 67
Query: 335 ESAEN-NSIVDVIGIVISVNPSVPILRKNGME-TQRRILNLKDTSGRSVELTLWGDFCNK 392
N +VDV G+V SV+P++ I RK+ E +R + + D S +SV ++LW D
Sbjct: 68 GPYVNGKELVDVSGVVQSVSPTMTIRRKSTNEIVPKRDITIADKSKKSVVVSLWNDHATN 127
Query: 393 EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWF-DSG 451
G +L + D FP++++KS KV DF G S+ T+ + +NPD E+ +LR W+ D
Sbjct: 128 VGXELLDNADK--FPIIAIKSLKVGDFQGVSLSTLSKSIALVNPDTPESKKLRSWYHDYH 185
Query: 452 GKNAATVSISREIA---AGGAKNEIHKTVSQ---IKNEGLGRSEKPDWVTVRAFITFIKS 505
GK A+ I +I+ GG ++ + VS N LG +KP + ++RA+I+FIK
Sbjct: 186 GKVASMACIGSDISPSSKGGVRSMYYDRVSLSHVTSNPSLGE-DKPSFFSIRAYISFIKP 244
Query: 506 D-SFCYTACPLMIGDRQCNKKVT---QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGL 561
+ + Y AC + CNKKVT +SG + C+ C + DEC RY++ ++ D +G
Sbjct: 245 EQTMWYQAC------KTCNKKVTDAIESG--YWCEGCEKNDDECSXRYIMVVKVSDDSGE 296
Query: 562 TWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDE 621
+ F E E I GC A EL LK + ++ RF + ++ ++ +LFR+ + + Y +E
Sbjct: 297 ACLALFNEQAERIFGCSADELDKLKSQEGEENRFQQKLKEAIWVPHLFRISVAQHEYMNE 356
Query: 622 QRVKITVIRADQVNYSSESRYLLDLISK 649
+R IT V++++ESR LL+ ISK
Sbjct: 357 KRQWITARAVVAVDFAAESRLLLEEISK 384
>gi|428166243|gb|EKX35222.1| replication protein A1, 70kDa, partial [Guillardia theta CCMP2712]
Length = 439
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 147/461 (31%), Positives = 242/461 (52%), Gaps = 39/461 (8%)
Query: 209 IPIAALNPYQGRWAIKARVTAKGDLRRY---NNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
+PIA ++PY G +KA++ +K D+RR+ NN D VFS +LD D +++VT +N
Sbjct: 1 VPIAMIHPY-GSCNVKAKLISKEDVRRFKGRNNT--DMAVFSAVVLD-DSSDMKVTFWNE 56
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQ 325
+++++ + VG+ Y+ SKGS K AQ +N+ K ++E+ + +T++ C EED P+
Sbjct: 57 QCEKYHDSLVVGQWYVFSKGSFKVAQSKYNNTKCQYEMTVSTNTTIERCLEED--APQVC 114
Query: 326 FSFRHISE---IESAENNSIVDVIGIVISVNP----SVPILRKNGMETQRRILNLKDTSG 378
S I + N VDVIG+V V ++ R +G + +R ++L D SG
Sbjct: 115 ISLYMIEVNCLLVEKGNLQNVDVIGVVQEVEALGEITIKQGRDSGKQKSKRNVSLVDKSG 174
Query: 379 RSVELTLWGDFCNKEGQKLQEMVDVGF---FPVLSVKSGKVNDFSGKSIGTIPSTQLFIN 435
++V +TLW + E D +L+V+ +V+D++G S+ T+ S+ L IN
Sbjct: 175 KTVSITLWDNHA--------EQFDTSHATNHSILAVRGARVSDYNGCSLSTLRSSMLQIN 226
Query: 436 PDFAEAHELREWFDS--GGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLG-RSEKPD 492
P+ EA +LREW+ S GK+ V + G K + + E LG + K D
Sbjct: 227 PETPEAKDLREWYSSCDSGKSFQPVGEGTQAGKGPGGPAPRKLIEAVSKESLGSNTSKAD 286
Query: 493 WVTVRAFITFIKSDS-FCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLL 551
T++A++T+ ++ + Y A P + KKV SG+ W + +ID C RY+
Sbjct: 287 IFTIKAYVTYSNTEKQWQYPANP------ENKKKVVASGDVWIDESTGTQIDTCQRRYIT 340
Query: 552 QAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRL 611
D TG W+T F E + ILG A ELY + E D V F + ++ F +Y+ ++
Sbjct: 341 TFAFMDLTGRQWLTCFDEHAQLILGKSADELYEI--ECTDKVAFEGVWKAAYFKEYMIKV 398
Query: 612 KIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSFR 652
+ K E Y E R K +V+ + VNY SES++L+ I + +
Sbjct: 399 RAKAEEYKGETRTKFSVMSLEPVNYVSESQHLISEIRRYLK 439
>gi|269860800|ref|XP_002650118.1| replication factor-A protein 1 [Enterocytozoon bieneusi H348]
gi|220066438|gb|EED43919.1| replication factor-A protein 1 [Enterocytozoon bieneusi H348]
Length = 567
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 238/440 (54%), Gaps = 36/440 (8%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
PI +NP+ W I+ R+ K +L+++NN G+GKVFSF+++D + +I+V CF +
Sbjct: 161 PIKDINPFLINWKIQGRILQKTNLKKFNNKNGEGKVFSFEIMD-ETEQIKVICFGDAAEM 219
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFR 329
FY +IE ++Y ++ G +K A K FN ++EI L+ S ++LC + + IP F F+
Sbjct: 220 FYPLIENNQIYSLTHGQIKMANKRFNTNNCDYEIHLDTNSIIELCNDASN-IPMISFKFK 278
Query: 330 HISEIESAENNSIVDVIGIVISVNPSVPILRK-NGMETQRRILNLKDTSGRSVELTLWGD 388
I+E+ S+VD++GI+ + P I+ K + E +R + + D +G +++TLWGD
Sbjct: 279 KINELSLI--TSLVDIVGIIKEIYPIQNIITKSDNREISKRDILVIDETGY-IKVTLWGD 335
Query: 389 FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWF 448
+E QK V+ +K KV +++G ++G++ S+Q+ +N E +L +W+
Sbjct: 336 KALQEYQK---------DSVICLKGFKVIEYNGINLGSVSSSQVVLNSMLPEVIKLVKWY 386
Query: 449 DSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSF 508
++ GK IS E K +I+ I N E + + IT+IK D+
Sbjct: 387 ETEGK-----EISVE------KTKIYTKRYSIANITESNIE---YGIIHGTITYIKEDNL 432
Query: 509 CYTACPLMIGDRQCNKKVTQSG-NRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAF 567
Y ACP C+KKV Q ++C++CN C+YRY+ I D TG W+ F
Sbjct: 433 YYMACP----TDGCSKKVIQEDLEHYRCEKCNNVFKTCNYRYMTVLGISDFTGQLWINVF 488
Query: 568 QESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKIT 627
+ ++I A++L+ LK E+ D +++++ + ++ ++++ +++Y +E +I
Sbjct: 489 NDVAKQIFNISAEDLHKLK-EIDSD-NATKLVKNIIGKEFAIKVRVVKQIYNEETIKRIN 546
Query: 628 VIRADQVNYSSESRYLLDLI 647
+ D++N E + + +LI
Sbjct: 547 CLELDEINLDQEIKLMTELI 566
>gi|157871830|ref|XP_001684464.1| putative replication factor A, 51kDa subunit [Leishmania major
strain Friedlin]
gi|68127533|emb|CAJ05550.1| putative replication factor A, 51kDa subunit [Leishmania major
strain Friedlin]
Length = 467
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/447 (32%), Positives = 245/447 (54%), Gaps = 47/447 (10%)
Query: 207 RIIPIAALNPY-QGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
+I PI +L P+ G+W I+ARVT K D+R +N GK+FSF L+D + IR T FN
Sbjct: 8 QIQPIDSLTPFLGGKWWIRARVTDKTDIRTWNKPTSQGKLFSFTLID-ESAAIRATVFND 66
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDS--IPK 323
VD F +I G+VY S G +K A + F+++ N++E+ + +S + L ++ + +P
Sbjct: 67 AVDTFEPLIVNGQVYYFSGGQVKNANRRFSNVNNDYELTFDRSSEIMLARQDTSTAALPM 126
Query: 324 QQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSGRSVE 382
Q+++F I ++ E S+VDV+G+V+ V+ I +K+ G E +R + + D + +VE
Sbjct: 127 QRYNFVPIELLKQREVGSLVDVLGVVLKVDEVSSITQKSTGRELMKRNVKMGDMTA-AVE 185
Query: 383 LTLWGD----FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP-D 437
+T W D +C G V++++ KV F G ++ + T++ INP D
Sbjct: 186 VTFWNDEAKAWCYPVG------------TVVALRQLKVGSFDGVTLSSTYQTKIDINPTD 233
Query: 438 FAEAHELREWF-DSGGKNAATVSISREIAAGGAKNEI---HKTVSQIKNEGLGRSEKPDW 493
+ +L W+ +GG N ++S AA GA E K + +I++EG+GR KP++
Sbjct: 234 LPDVKKLATWYVATGGANVTSLSSQGLGAASGAGGESDRGRKYLDEIQSEGIGRGLKPEY 293
Query: 494 VTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQS---GNRWQCDRCNQEIDECDYRYL 550
V VR + K D+ Y ACP CNKKVT+ G+R++C++C++ + RYL
Sbjct: 294 VDVRCVPIYFKQDAQWYDACP------TCNKKVTEEGAQGDRFRCEKCDKTVTPTQ-RYL 346
Query: 551 LQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDD-VRFGEIIRSRVFNQYLF 609
+ Q+ D W+T F E+G E G A E LK Q+D + ++ + R+ +
Sbjct: 347 VSIQVTDNVSQAWLTLFNEAGIEFFGMEAAE---LKRRAQEDPLYIAKLAQGRMNRPVVM 403
Query: 610 RLKIKEE-----LYGDEQ-RVKITVIR 630
RL++KEE + G+E R++++V+R
Sbjct: 404 RLRVKEEMSSNSMTGEESDRLRMSVVR 430
>gi|170580146|ref|XP_001895135.1| replication factor A 73 kDa subunit [Brugia malayi]
gi|158598024|gb|EDP36015.1| replication factor A 73 kDa subunit, putative [Brugia malayi]
Length = 613
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 168/651 (25%), Positives = 301/651 (46%), Gaps = 87/651 (13%)
Query: 21 KPLVQVMDIKLIGSTQ-------ERYRFLISDSVSTQHAML-ATQLNDRVKTGQVKKGSV 72
+P++QV++ + + ++Q + +RF ISD + + ++ L + +R+KT + +G+
Sbjct: 24 RPVIQVLEARPLVNSQAESASEAQYFRFRISDGMFSYNSCLNQASITERIKTDALDQGNP 83
Query: 73 VQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRV 132
V I Y Q + ++ +++ E + D GNP
Sbjct: 84 VLRIKYTIKAAQ-KPLLRIMDYEILGRDLPVFGNP------------------------- 117
Query: 133 NNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPN 192
+S NP + N PNA + + +P ++ P +
Sbjct: 118 -----------------VHHSGNPNDYRGLN------PNAN--MHNTRPELRSPQKGGST 152
Query: 193 FRNHGPI---------LKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDG 243
+ P+ L N + PI + PY +W I VTAK DLR R D
Sbjct: 153 SGQNTPLRYGGSSSRRLANLVGQNLTPIKLITPYVNKWRICGVVTAKEDLRNIRTVRRDM 212
Query: 244 KVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI 303
KVF+F+L D +GG IR+ F+ V + FY II+ G ++ +S G++K A K FN +++EI
Sbjct: 213 KVFNFELTDEEGGCIRIAAFDDVAEEFYSIIQKGSMFYVSGGTVKQANKRFNTTGHDYEI 272
Query: 304 FLEATSTVDLCTE-EDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN 362
+ + S V C + E PK S + + + S VD+I IV VN + + +N
Sbjct: 273 TIRSDSEVSPCLDREKIEQPKLSLSIVRLCNVANHVGES-VDIIAIVEKVNDIMQVTARN 331
Query: 363 -GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG 421
G + ++R + L D S + LT WG+ Q+++ + +K V +F+G
Sbjct: 332 TGAQLEKRDIVLIDASETEITLTFWGEQARLYDQEIEGQ-------TIGIKGAFVKEFNG 384
Query: 422 K-SIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQI 480
S+ T S+++ +N + AE L +W+ + +++ + + +
Sbjct: 385 SLSLSTGNSSRIELNMECAETANLYKWYRETRPSIQARNLTTTGLTTDSYGRDLRIICLS 444
Query: 481 KNEGLGR-SEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCN 539
+ GLGR SEK + + A I+ +K+D Y +C G C KKV + N+++C++C+
Sbjct: 445 EFCGLGRDSEKGTFFNITAMISSLKADGALYKSC----GTNGCKKKVIEINNQYRCEKCD 500
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL-YMLKYELQDDVRFGEI 598
+D+ Y L+ +I D +G WVT F++ ++L A++L +L L D+ + E+
Sbjct: 501 ITLDKYKYVLLMTMEISDFSGSHWVTVFEDKAVKLLKTDAEQLGQLLDNNLLDE--YNEV 558
Query: 599 IRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+ F +Y FR++ K E Y E++ K +V ++VNY L +SK
Sbjct: 559 FNAVRFREYTFRIRAKSEFYNGEEKNKWSVFDINEVNYDKYIDELTRAVSK 609
>gi|429966174|gb|ELA48171.1| replication factor-a protein 1 (rpa1) [Vavraia culicis
'floridensis']
Length = 612
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 177/638 (27%), Positives = 292/638 (45%), Gaps = 93/638 (14%)
Query: 22 PLVQVMDIKLIGSTQE---RYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
P+VQ++ +K I + RY ISDS + ++Q++ V G ++ +++++ D+
Sbjct: 54 PVVQLLSLKKIEGKSDKTVRYHITISDSKLYMKGIFSSQVSKDV--GDLRVNTLIKISDF 111
Query: 79 ICSTVQNRKIIVVLNMETIILDCEPIGNPK-------IFSESELTAQKTIPSNNLPQPVR 131
+ I + E I DCE +G+PK + S E+ + K I N +
Sbjct: 112 VILEKNGNCFIYIKGCEKI-KDCERMGSPKNANSTDKVDSSVEMDSSK-IKHNEKGE--- 166
Query: 132 VNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPP 191
N A N + G+ N G N+G R+ N +
Sbjct: 167 -NEKRAVNENSSKRMQVGSSN----GKAEKENAGCVRSANHDA----------------- 204
Query: 192 NFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL 251
+ PIAALNP+Q +W +K V K +LR + + DGK FSF+LL
Sbjct: 205 ----------DGDKKAYTPIAALNPFQTKWIVKGTVQKKSELREFK--KKDGKFFSFELL 252
Query: 252 DSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTV 311
D G I+ FN D F+ I+ G V ISK +K K F + +++EI LE S V
Sbjct: 253 DKTGN-IKCVAFNDGADLFHGIVAEGSVVEISKAVVKMCNKKFANTSSDYEIHLEKNSVV 311
Query: 312 DLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNP-SVPILRKNGMETQRRI 370
L EE ++ F IS++ N + DVIG+V P SV + + + E ++R
Sbjct: 312 SLVNEEGLAMS---FDLCKISDLVGRVNKANCDVIGVVHEAFPVSVVLAKASQREIKKRD 368
Query: 371 LNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI-GTIPS 429
L L D +G +V TLWGD + +++ PVL +K +V +F+ + T
Sbjct: 369 LILVDQTG-TVRATLWGD---------KSEIELDEHPVLLLKDVRVGEFNNAVVLSTAFG 418
Query: 430 TQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSE 489
+ + ++P+ EA+ LR W+D ++ +V + R +NE + + +I++ G
Sbjct: 419 SAVKVDPEMDEAYSLRGWYD---EHKQSVVVERP-----QRNE-YTFIEEIQSYG----- 464
Query: 490 KPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRY 549
T A + FI+ D+ Y AC CNKKV+ + + C+RCNQ + C RY
Sbjct: 465 -----TCAATVLFIREDNLFYNACA-----NNCNKKVSLTDEGYYCERCNQTKETCSIRY 514
Query: 550 LLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLF 609
L + D T W+ F + E G A EL + E + + +++ ++ +Y+
Sbjct: 515 LTTLHVADFTQQVWLNVFDDFCTEFFGMTAYELKKMGEE--NATQLQNYLKTLLYKEYVI 572
Query: 610 RLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
R+K EE+Y E RV+ + ++NY ES +L L+
Sbjct: 573 RMKRSEEVYNGEMRVRWRGLSIKKINYLDESVRMLRLM 610
>gi|398018224|ref|XP_003862293.1| replication factor A, 51kDa subunit, putative [Leishmania donovani]
gi|322500522|emb|CBZ35599.1| replication factor A, 51kDa subunit, putative [Leishmania donovani]
Length = 467
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 145/446 (32%), Positives = 243/446 (54%), Gaps = 45/446 (10%)
Query: 207 RIIPIAALNPY-QGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
+I PI +L P+ G+W I+ARVT K D+R +N GK+FSF L+D + IR T FN
Sbjct: 8 QIQPIDSLTPFLGGKWWIRARVTDKTDIRTWNKPTSQGKLFSFTLID-ESAAIRATVFND 66
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDS--IPK 323
VD F +I G+VY S G +K A + F+++ N++E+ + +S + L ++ + +P
Sbjct: 67 AVDTFEPLIVNGQVYYFSGGQVKNANRRFSNVNNDYELTFDRSSEIMLARQDTSTAALPM 126
Query: 324 QQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSGRSVE 382
Q+++F I ++ E S+VDV+G+V+ V+ I +K+ G E +R + + D + +VE
Sbjct: 127 QRYNFVPIELLKQREVGSLVDVLGVVLKVDEVSSITQKSTGRELVKRNVKMGDMTA-AVE 185
Query: 383 LTLWGD----FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP-D 437
+T W D +C G V++++ KV F G ++ + T++ INP D
Sbjct: 186 VTFWNDEAKAWCYPVG------------TVVALRQLKVGSFDGVTLSSTYQTKIDINPTD 233
Query: 438 FAEAHELREWF-DSGGKNAATVSISREIAAGGAKNEI---HKTVSQIKNEGLGRSEKPDW 493
+ +L W+ +GG N ++S AA GA E K + +I++EG+GR KP++
Sbjct: 234 LPDVKKLAAWYVTTGGANVTSLSSQGLGAASGAGGESDRGRKYLDEIQSEGIGRGLKPEY 293
Query: 494 VTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQS---GNRWQCDRCNQEIDECDYRYL 550
V VR + K D+ Y ACP CNKKVT+ G+R++C++C++ + RYL
Sbjct: 294 VDVRCVPIYFKQDAQWYDACP------TCNKKVTEEGAQGDRFRCEKCDKTVTPTQ-RYL 346
Query: 551 LQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFR 610
+ Q+ D W+T F E+G E G A EL E D + ++ + R+ + R
Sbjct: 347 VSIQVTDNVSQAWLTLFNEAGIEFFGMEAAELKRRAQE--DPLYIAKLAQGRMNRPVVMR 404
Query: 611 LKIKEE-----LYGDEQ-RVKITVIR 630
L++KEE + G+E R++++V+R
Sbjct: 405 LRVKEETSSNAMTGEESDRLRMSVVR 430
>gi|146092153|ref|XP_001470220.1| putative replication factor A, 51kDa subunit [Leishmania infantum
JPCM5]
gi|134085014|emb|CAM69415.1| putative replication factor A, 51kDa subunit [Leishmania infantum
JPCM5]
Length = 467
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 145/446 (32%), Positives = 243/446 (54%), Gaps = 45/446 (10%)
Query: 207 RIIPIAALNPY-QGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
+I PI +L P+ G+W I+ARVT K D+R +N GK+FSF L+D + IR T FN
Sbjct: 8 QIQPIDSLTPFLGGKWWIRARVTDKTDIRTWNKPTSQGKLFSFTLID-ESAAIRATVFND 66
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDS--IPK 323
VD F +I G+VY S G +K A + F+++ N++E+ + +S + L ++ + +P
Sbjct: 67 AVDTFEPLIVNGQVYYFSGGQVKNANRRFSNVNNDYELTFDRSSEIMLARQDTSTAALPM 126
Query: 324 QQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSGRSVE 382
Q+++F I ++ E S+VDV+G+V+ V+ I +K+ G E +R + + D + +VE
Sbjct: 127 QRYNFVPIELLKQREVGSLVDVLGVVLKVDEVSSITQKSTGRELVKRNVKMGDMTA-AVE 185
Query: 383 LTLWGD----FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP-D 437
+T W D +C G V++++ KV F G ++ + T++ INP D
Sbjct: 186 VTFWNDEAKAWCYPVG------------TVVALRQLKVGSFDGVTLSSTYQTKIDINPTD 233
Query: 438 FAEAHELREWF-DSGGKNAATVSISREIAAGGAKNEI---HKTVSQIKNEGLGRSEKPDW 493
+ +L W+ +GG N ++S AA GA E K + +I++EG+GR KP++
Sbjct: 234 LPDVKKLATWYVTTGGANVTSLSSQGLGAASGAGGESDRGRKYLDEIQSEGIGRGLKPEY 293
Query: 494 VTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQS---GNRWQCDRCNQEIDECDYRYL 550
V VR + K D+ Y ACP CNKKVT+ G+R++C++C++ + RYL
Sbjct: 294 VDVRCVPIYFKQDAQWYDACP------TCNKKVTEEGAQGDRFRCEKCDKTVTPTQ-RYL 346
Query: 551 LQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFR 610
+ Q+ D W+T F E+G E G A EL E D + ++ + R+ + R
Sbjct: 347 VSIQVTDNVSQAWLTLFNEAGIEFFGMEAAELKRRAQE--DPLYIAKLAQGRMNRPVVMR 404
Query: 611 LKIKEE-----LYGDEQ-RVKITVIR 630
L++KEE + G+E R++++V+R
Sbjct: 405 LRVKEETSSNAMTGEESDRLRMSVVR 430
>gi|344230770|gb|EGV62655.1| hypothetical protein CANTEDRAFT_115222 [Candida tenuis ATCC 10573]
Length = 376
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 210/382 (54%), Gaps = 22/382 (5%)
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRH 330
YE ++ G+VY ISK ++ A+ F+ L + +E+ L+ + V+ C + ++PK +F+F
Sbjct: 2 YETLQEGKVYYISKARIQAAKPQFSRLSHPYELSLDRDTIVEECFSNNGNVPKLKFNFTK 61
Query: 331 ISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSGRSVELTLWG-- 387
+++I+SAE N+++DV+G++ V P+ I K+ G RR +++ D S S+ + LW
Sbjct: 62 LNQIQSAEPNTVIDVVGVLREVKPAFQITSKSTGKPFDRRDIDIVDDSNFSITVGLWNAT 121
Query: 388 --DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELR 445
DF EG V++ K K+ DF G+S+ + + NPD EA++L+
Sbjct: 122 AIDFNLSEG------------TVIAFKGCKIQDFGGRSLTLTQTGSILPNPDAPEAYQLK 169
Query: 446 EWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKS 505
W+D+ G N ++ + A + KT++Q+K E LG E+PD+ +V+A I F K+
Sbjct: 170 GWYDNQGSNETFQTLKADNAGSANYIKNRKTIAQVKEENLGAQEQPDFFSVKATINFFKT 229
Query: 506 DSFCYTAC--PLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLT 562
++FCY AC + CN+K+ G+ W+C++C+ E YRY+L I D T
Sbjct: 230 ETFCYPACVNKQEASNNLCNRKIIDQGDGTWRCEKCDINYSEATYRYILNCSIMDATEQL 289
Query: 563 WVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQ 622
W T F + +I G A EL +LK ++ F +++ + ++ FRLK +++ Y E
Sbjct: 290 WATLFDQEASKIFGVSANELLVLKE--SNEAEFKKVVEAVTMKEFSFRLKARQDSYNGES 347
Query: 623 RVKITVIRADQVNYSSESRYLL 644
R++ + +++++E +L+
Sbjct: 348 RIRYQTMAVYDIDFAAECDFLV 369
>gi|294949396|ref|XP_002786176.1| Replication protein A 70 kDa DNA-binding subunit, putative
[Perkinsus marinus ATCC 50983]
gi|239900333|gb|EER17972.1| Replication protein A 70 kDa DNA-binding subunit, putative
[Perkinsus marinus ATCC 50983]
Length = 479
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 246/464 (53%), Gaps = 37/464 (7%)
Query: 209 IPIAALNPYQGR-WAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
PI ++ Y R W IKARVTAK +R + NARG G VFS DLLD +G EIR + FNA
Sbjct: 5 FPIREISSYSVRNWTIKARVTAKSPVRHFTNARGGGSVFSVDLLDKEGSEIRGSFFNAAA 64
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI-FLEATSTVDLCTEEDDSIPKQQF 326
++F ++++ G+VY SKG++K A K ++ + +EI F E + V++ + DD I K ++
Sbjct: 65 EKFDKLLQKGKVYTFSKGNVKVANKRYSSCNHNYEIVFEEDSQIVEVQDDVDDHIDKIKY 124
Query: 327 SFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLW 386
SF + E++S S VD++ ++ P+ + KNG E RR L + D SG V++T W
Sbjct: 125 SFCPVRELKSKSVPSTVDLLVVIKDHRPAGTVNSKNGAELFRRNLTVCDESGCCVDVTFW 184
Query: 387 GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELRE 446
D N + + + PV+++K V D+ G+S T+ STQ+ +NPD EA +L+
Sbjct: 185 NDLVNVVDESVLQTQ-----PVVAMKGVSVRDYGGRSCSTLNSTQIEVNPDIPEAKQLKI 239
Query: 447 WFDSGGKNAATVSISRE---IAAGGAKNEIHK--TVSQIKNE----GLGRSEKPDWVTVR 497
W+ + G + A ++S++ + G + + K T++++KN+ LG S + R
Sbjct: 240 WWANTGCSMAFTNLSQQGTSVPGSGGQTMVTKEMTIAEMKNDVKNMDLGGSMHSYEIIGR 299
Query: 498 -AFITFIKSDS----FCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQ 552
F+T D Y AC CN+K+ + + + C CN++++ RY+L+
Sbjct: 300 LQFVTTRGRDGNDIPIFYMAC------ESCNRKMAEGSDGF-CQACNRQVN-VKARYMLR 351
Query: 553 AQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDV--RFGEIIRSRVFN-QYLF 609
+Q D T ++T F + ++G P ++ M + DV G ++ ++ ++
Sbjct: 352 SQFVDSTDDAYLTCFHDQAHTLIGRPVEDFVMAQ-----DVGKSAGNELKEHYYDKEWKI 406
Query: 610 RLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSFRK 653
R++ K E Y E R +ITV + ++ R LL I ++ K
Sbjct: 407 RVRAKMETYQGEPRPRITVSSLEPMDPKEHCRRLLAAIHENIGK 450
>gi|384246518|gb|EIE20008.1| hypothetical protein COCSUDRAFT_19010 [Coccomyxa subellipsoidea
C-169]
Length = 476
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/453 (28%), Positives = 234/453 (51%), Gaps = 27/453 (5%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
PI ALNPY W I+A++ +K LR ++ A VF +++D G I +T + + ++
Sbjct: 34 PIHALNPYSNDWTIRAKLVSKAPLRHFDKAGQQQAVFGVEVVDDQGTTIEITLWRGLAEK 93
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFR 329
FY+ +E GRVY+ +G +K A KN+ ++N++ I ++ S ++ C + D S + F
Sbjct: 94 FYDHLEEGRVYIFRRGQVKLANKNYKTVRNDYTIHMDNGSEIEQCEDSDVSKMTAKLKFV 153
Query: 330 HISEIES-AENNSIVDVIGIVISVNPSVPILR-KNGMETQRRILNLKDTSGRSVELTLWG 387
+ A ++VDV+GI +V P + R ++G E RR + L D ++V +TLWG
Sbjct: 154 DFERLPMYAGKKTLVDVLGIATAVGPLGSVKRSRDGTELARRDVTLVDQGAKTVVVTLWG 213
Query: 388 DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREW 447
+ G +L++ D ++S+ S +V DF+G S+ T+ + + + P+ A LR W
Sbjct: 214 STAEEVGAQLEQQPDA----LISISSCRVTDFNGVSLSTVTRSGVSVEPEGERADALRRW 269
Query: 448 FDSGGKNAATVSISREIA----AGGAKNEIHKTVSQIKNEGLGRSE------KPDWVTVR 497
++S G+ A T + +A A G E+ +T +Q++ +G+ E KP + TV
Sbjct: 270 WESDGRTAPTQHLGEGLASAKRASGGAAEL-QTFAQLR---VGKEELPPADAKPQYHTVI 325
Query: 498 AFITFIKS-DSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQ 556
A + I S S Y ACP N+KV + G W C+ Q RY++ A
Sbjct: 326 ATVANIDSQQSLYYEACP------DNNRKVVKQGEGWFCEYDQQTYMAMVRRYVMLANCV 379
Query: 557 DQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEE 616
D +G ++ F E E +LG A E+ LK + + + +++ +++++ R++ + +
Sbjct: 380 DASGDCLLSVFNEQAEALLGISADEIATLKEDETNPGPYEAVLKRAQWSEWVLRVQSRTQ 439
Query: 617 LYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
Y E R +++V V+Y ESR ++ + +
Sbjct: 440 EYNGELRQRLSVASLKPVSYVEESRRMVQALDR 472
>gi|401425076|ref|XP_003877023.1| putative replication factor A, 51kDa subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493267|emb|CBZ28552.1| putative replication factor A, 51kDa subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 467
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/447 (32%), Positives = 245/447 (54%), Gaps = 47/447 (10%)
Query: 207 RIIPIAALNPY-QGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
+I PI +L P+ G+W I+ARVT K D+R +N GK+FSF L+D + IR T FN
Sbjct: 8 QIQPIDSLTPFLGGKWWIRARVTDKTDVRTWNKPTSQGKLFSFTLID-ESAAIRATVFND 66
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDS--IPK 323
VD F +I G+VY S G +K A + F+++ N++E+ + +S + L ++ + +P
Sbjct: 67 AVDTFEPLIVNGQVYYFSGGQVKNANRRFSNVNNDYELTFDRSSEIMLARQDTSTAALPM 126
Query: 324 QQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSGRSVE 382
Q+++F I ++ E S+VDV+G+V+ V+ I +K+ G E +R + + D + +VE
Sbjct: 127 QRYNFVPIELLKQREVGSLVDVLGVVLKVDEVSSITQKSTGRELVKRNVKMGDMTA-AVE 185
Query: 383 LTLWGD----FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP-D 437
+T W D +C G V++++ KV F G ++ + T++ INP D
Sbjct: 186 VTFWNDEAKAWCYPVG------------TVVALRQLKVGSFDGVTLSSTYQTKIDINPTD 233
Query: 438 FAEAHELREWF-DSGGKNAATVSISREIAAGGAKNEI---HKTVSQIKNEGLGRSEKPDW 493
+ +L W+ +GG N ++S AA GA E K + +I+++G+GR KP++
Sbjct: 234 LPDVKKLATWYVTTGGANVMSLSSQGLGAASGAGGESDRGRKYLDEIQSDGIGRGLKPEY 293
Query: 494 VTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQS---GNRWQCDRCNQEIDECDYRYL 550
V VR + K D+ Y ACP CNKKVT+ G+R++C++C++ + RYL
Sbjct: 294 VDVRCVPIYFKQDAQWYDACP------TCNKKVTEEGAQGDRFRCEKCDKTVTPTQ-RYL 346
Query: 551 LQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDD-VRFGEIIRSRVFNQYLF 609
+ Q+ D W+T F E+G E G A E LK Q+D + ++ + R+ +
Sbjct: 347 VSIQVTDNVSQAWLTLFNEAGIEFFGMEAAE---LKRRAQEDPLYIAKLAQGRMNRPVVM 403
Query: 610 RLKIKEE-----LYGDEQ-RVKITVIR 630
RL++KEE + G+E R++++V+R
Sbjct: 404 RLRVKEETSSNAMTGEESDRLRMSVVR 430
>gi|13096131|pdb|1FGU|A Chain A, Ssdna-Binding Domain Of The Large Subunit Of Replication
Protein A
gi|13096132|pdb|1FGU|B Chain B, Ssdna-Binding Domain Of The Large Subunit Of Replication
Protein A
Length = 252
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/257 (42%), Positives = 163/257 (63%), Gaps = 11/257 (4%)
Query: 206 ARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
++++PIA+L PYQ +W I ARVT K +R ++N+RG+GK+FS +L+D + GEIR T FN
Sbjct: 2 SKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVD-ESGEIRATAFNE 60
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQ 325
VD+F+ +IEV +VY SKG+LK A K F +KN++E+ ++V C E+D +P Q
Sbjct: 61 QVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPC-EDDHHLPTVQ 119
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELT 384
F F I ++E+ +S+VD+IGI S + I +R N E +R + L DTSG+ V T
Sbjct: 120 FDFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTAT 179
Query: 385 LWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHEL 444
LWG+ +K Q PVL++K +V+DF G+S+ + S+ + NPD EA++L
Sbjct: 180 LWGEDADKFDGSRQ--------PVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKL 231
Query: 445 REWFDSGGKNAATVSIS 461
R WFD+ G+ VSIS
Sbjct: 232 RGWFDAEGQALDGVSIS 248
>gi|440491670|gb|ELQ74291.1| Single-stranded DNA-binding replication protein A
[Trachipleistophora hominis]
Length = 577
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 172/633 (27%), Positives = 289/633 (45%), Gaps = 87/633 (13%)
Query: 22 PLVQVMDIKLIGSTQE---RYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
P+VQ++ +K I + RY ISD + ++Q++ V G +K +++++ D+
Sbjct: 23 PVVQLLSLKKIEGKSDKTVRYHITISDGKLYMKGIFSSQVSKEV--GDIKVNTIIKISDF 80
Query: 79 ICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESE-LTAQKTIPSNNLPQPVRVNNYSA 137
+ I + E I DCE +G+PK S +E + + + S+ + Q + A
Sbjct: 81 VILEKNGNCFIYIKGCEKI-RDCERVGSPKNASSTEKVDSSVEMDSSKIKQSEKNTAKRA 139
Query: 138 PNSGTFNLQNSGTFNSQNPG-SFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNH 196
P+ G N + S + N+ T
Sbjct: 140 PDENNNKRVQVGDNNGKTAKESVTGTNNST------------------------------ 169
Query: 197 GPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGG 256
++ PIAALNP+Q +W +K V K ++R + + DGK FSF+LLD G
Sbjct: 170 -----DDEKKAYTPIAALNPFQTKWIVKGTVQKKSEMREFK--KKDGKFFSFELLDKTGN 222
Query: 257 EIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE 316
I+ FN D FY +I G V ISK +K K F + +++EI LE S V L E
Sbjct: 223 -IKCVAFNDGADLFYGMIVEGSVVEISKAVVKMCNKKFANTSSDYEIHLEKNSVVSLLNE 281
Query: 317 EDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNP-SVPILRKNGMETQRRILNLKD 375
E S+ + IS + N + DVIGIV P SV + + + E ++R L L D
Sbjct: 282 EGLSMS---YDLCKISNLAGRVNKANCDVIGIVHEAFPVSVVLAKASQREIKKRDLVLAD 338
Query: 376 TSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI-GTIPSTQLFI 434
+G +V TLWGD + +++ PVL +K +V +F+ + T + + +
Sbjct: 339 ETG-TVRATLWGD---------KSEIELDDHPVLLLKDVRVGEFNNAVVLSTAFGSAVKV 388
Query: 435 NPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWV 494
+P+ EA+ LR W+D ++ +V + R +N+ + + +I+ G
Sbjct: 389 DPEMDEAYALRGWYD---EHKQSVVVERP-----QRND-YAFIEEIQGYG---------- 429
Query: 495 TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQ 554
T A + FI+ D+ Y AC CNKKV+ + + C+RCNQ + C+ RYL
Sbjct: 430 TCSATVLFIREDNLFYNACA-----NNCNKKVSLTDEGYYCERCNQTREICNIRYLTTLH 484
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIK 614
+ D T W+ F + E G A EL + E + + +++ ++ +Y+ ++K
Sbjct: 485 VADFTQQVWLNVFDDFCTEFFGMTAVELKKMGEE--NATQLQNYLKTLLYREYVIKMKRS 542
Query: 615 EELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
EE+Y E RV+ + ++NY ES +L L+
Sbjct: 543 EEVYNGEMRVRWRGLSIKKINYLDESVRMLRLM 575
>gi|429963164|gb|ELA42708.1| replication factor-a protein 1 (rpa1) [Vittaforma corneae ATCC
50505]
Length = 588
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 237/452 (52%), Gaps = 37/452 (8%)
Query: 200 LKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIR 259
K A I I + P++ + K RV +K +++++ +GDG+VFSF++ D G +I+
Sbjct: 169 FKEAANEDITDIKKIFPHKKTFKFKGRVVSKTEIKKFTTQKGDGQVFSFEIADCTG-QIK 227
Query: 260 VTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD 319
F+ VD FY ++E + Y+IS ++KP+ K F++ +++EI LE + + EDD
Sbjct: 228 CVAFSECVDTFYPLVENNKAYVISNVTVKPSNKKFSNNTSDFEIHLEKNTIITKV--EDD 285
Query: 320 SIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSG 378
+IPK F F I+++ S +VD + ++ P I ++ G E+ +R L + D +G
Sbjct: 286 NIPKYMFKFVKIADLASV--GGVVDCLAVIKEAYPVGKITIKSTGRESAKRDLMIIDQTG 343
Query: 379 RSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDF 438
S LTLWG +E +K ++ + S KV D++G ++ T+ ++Q+ N +
Sbjct: 344 -SCRLTLWGPKAEEEYEKDN---------IICLGSVKVGDYNGINLTTVSNSQVIQNIEL 393
Query: 439 AEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRA 498
EA EL W++ G+N + + I +S++K+ L ++ T++
Sbjct: 394 PEAIELLAWYEEKGRNIV-IEKPKRIPK-------RSFISEVKDNSL------EYATIQG 439
Query: 499 FITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNR-WQCDRCNQEIDECDYRYLLQAQIQD 557
+ ++K + Y ACP CNKKV N ++C++CN ++C+YRY++ + D
Sbjct: 440 SVVYLKEEGLFYEACP----SETCNKKVLMEDNGIFRCEKCNYTFEKCNYRYMINIHVGD 495
Query: 558 QTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEEL 617
TG W+T F E G+ +LG A EL + ++V +I+ + FRL+ KEE
Sbjct: 496 FTGQMWITIFDEGGKSLLGVTAAELKEMGECNPENVH--NLIKGIYSKELQFRLRNKEEN 553
Query: 618 YGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
Y + +++ + + V+Y E++ +L+ I K
Sbjct: 554 YNGDIKLRSSCLEISPVDYVFETKRMLEAIEK 585
>gi|15148880|gb|AAK84867.1|AF399823_1 replication protein A subunit 1 [Leishmania infantum]
Length = 467
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 145/447 (32%), Positives = 244/447 (54%), Gaps = 47/447 (10%)
Query: 207 RIIPIAALNPY-QGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
+I PI +L P+ G+W I+ARVT K D+R +N GK+FSF L+D + I FN
Sbjct: 8 QIQPIDSLTPFLGGKWWIRARVTDKTDIRTWNKPTSQGKLFSFTLID-ESAAIGANVFND 66
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDS--IPK 323
VD F +I G+VY S G +K A + F+++ N++E+ + +S + L ++ + +P
Sbjct: 67 AVDTFEPLIVNGQVYYFSGGQVKNANRRFSNVNNDYELTFDRSSEIMLARQDTSTAALPM 126
Query: 324 QQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSGRSVE 382
Q+++F I ++ E S+VDV+G+V+ V+ I +K+ G E +R + + D + +VE
Sbjct: 127 QRYNFVPIELLKQREVGSLVDVLGVVLKVDEVSSITQKSKGRELVKRNVKMGDMTA-AVE 185
Query: 383 LTLWGD----FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP-D 437
+T W D +C G V++++ KV F G ++ + T++ INP D
Sbjct: 186 VTFWNDEAKAWCYPVG------------TVVALRQLKVGSFDGVTLSSTYKTKIDINPTD 233
Query: 438 FAEAHELREWF-DSGGKNAATVSISREIAAGGAKNEI---HKTVSQIKNEGLGRSEKPDW 493
A+ +L W+ +GG N ++S AA GA E K + +I++EG+GR KP++
Sbjct: 234 LADVKKLATWYVTTGGANVTSLSSQGLGAASGAGGESDRGRKYLDEIQSEGIGRGLKPEY 293
Query: 494 VTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQS---GNRWQCDRCNQEIDECDYRYL 550
V VR + K D+ Y ACP CNKKVT+ G+R++C++C++ + RYL
Sbjct: 294 VDVRCVPIYFKQDAQWYDACP------TCNKKVTEEGAQGDRFRCEKCDKTVTPTQ-RYL 346
Query: 551 LQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDD-VRFGEIIRSRVFNQYLF 609
+ Q+ D W+T F E+G E G A E LK Q+D + ++ + R+ +
Sbjct: 347 VSIQVTDNVSQAWLTLFNEAGIEFFGMEAAE---LKRRAQEDPLYIAKLAQGRMNRPVVM 403
Query: 610 RLKIKEE-----LYGDEQ-RVKITVIR 630
RL++KEE + G+E R++++V+R
Sbjct: 404 RLRVKEETSSNAMTGEESDRLRMSVVR 430
>gi|209879421|ref|XP_002141151.1| replication factor-A protein 1 [Cryptosporidium muris RN66]
gi|209556757|gb|EEA06802.1| replication factor-A protein 1, putative [Cryptosporidium muris
RN66]
Length = 870
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 249/509 (48%), Gaps = 65/509 (12%)
Query: 162 PNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRW 221
P SG A N G I RS PY GPI +N+ + PI ++ Y RW
Sbjct: 343 PGSG---AVNMGHIQRS------GPYSSGSR---GGPISRNQ-DIPVYPIKSITSYLHRW 389
Query: 222 AIKARVTAKGDLRRYNNARG-DGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
I RV +K D+R +++++ +GKVFSF++ D++G +IR TCF VD+FYE ++ G +Y
Sbjct: 390 RIIGRVISKSDVRTFSSSKSKEGKVFSFEICDAEGSQIRATCFTKAVDKFYEFLKEGEIY 449
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENN 340
SKG +K A FN + +EI + + ED IPK+ ++F I++I +
Sbjct: 450 SFSKGDVKEANAKFNKTGHGFEIIFNEDADIQ-SMPEDSRIPKKAYNFVSIADIRNYSKG 508
Query: 341 SIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELTLWGDFCN-KEGQKLQ 398
+D++GI+ +P + I ++ G +TQ+R L + D SG S++LTLW + N EG Q
Sbjct: 509 QSIDILGILWKASPIMTITIKSTGADTQKRELTILDRSGYSIDLTLWSERTNLDEGMLAQ 568
Query: 399 EMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP-DFAEAHELREWFDSGGKNAAT 457
P+++VK+ + +F+G + P+T + NP + +A ELR+WF +
Sbjct: 569 N-------PMIAVKNAIIEEFNGFKLKFGPNTSIEWNPINIEQADELRQWFQESNNQNSI 621
Query: 458 VSISREIAA--GGAKNEIHKTVSQI---KNEGLGRSEKPD---WVTVRAFITFIKSDSFC 509
VS+S N +++ +I G+ S+ D WV A I I+ + +
Sbjct: 622 VSLSANSTGNINSVTNSQRQSIEEIIATATSGVNSSDILDGGIWVFTNATIRTIRDNKYF 681
Query: 510 YTACPLMIGDRQCNKKVTQ-----------------------SGNRWQCDRCNQEIDECD 546
+++C RQC +KVT+ +G + C C Q I++
Sbjct: 682 WSSC------RQCKRKVTEIEDPNSVSALILPFSSENGNKVNTGPNYHCPNCQQTIEDPL 735
Query: 547 YRYLLQAQIQDQTGLTWVTAFQESGEEIL-GCPAKELYMLKYELQDDVRFGEIIRSRVFN 605
+Y+L ++ D TG AF E GE I+ G +L ++ + +I + F+
Sbjct: 736 KKYILSCELIDSTGTLRAVAFAEHGESIMDGLNVDQLESMRNNPEKSTE--DIFADKNFS 793
Query: 606 QYLFRLKIKEELYGDEQRVKITVIRADQV 634
+++F+L ++E+Y D +K + + +
Sbjct: 794 EWVFKLNGRKEVYQDSTILKYRIFGVEDM 822
>gi|2833320|sp|Q23696.1|RFA1_CRIFA RecName: Full=Replication factor A 51 kDa subunit; AltName:
Full=RP-A p51; AltName: Full=Replication factor-A
protein 1; Short=RF-A protein 1; AltName:
Full=Single-stranded DNA-binding protein P51 subunit
gi|413772|emb|CAA80682.1| replication protein A 51 kilodalton subunit [Crithidia fasciculata]
Length = 467
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 143/443 (32%), Positives = 242/443 (54%), Gaps = 39/443 (8%)
Query: 207 RIIPIAALNPY-QGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
+I PI +L P+ G+W I+ARV K D+R +N GK+FSF L+D + IR T FN
Sbjct: 8 QIQPIDSLTPFLGGKWWIRARVADKSDIRTWNKPTSQGKLFSFTLID-ESAAIRATVFND 66
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD--SIPK 323
VD F ++ G+VY S G +K A + F+++ N++E+ + S V L ++ ++P
Sbjct: 67 AVDTFEPLVVNGQVYYFSGGQVKNANRRFSNVNNDYELTFDRASEVILARQDSSAAALPM 126
Query: 324 QQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSGRSVE 382
Q+++F I ++ E S+VDV+G+V+ V+ I +K+ G E +R + + D S +VE
Sbjct: 127 QRYNFVPIELLKQREVGSLVDVLGVVLKVDEISSITQKSTGRELIKRNVKIGDMSA-AVE 185
Query: 383 LTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP-DFAEA 441
+T W D E + V V++++ KV F G ++ + T++ +NP D +
Sbjct: 186 VTFWND----EAKAWNYPVGT----VVALRQLKVGSFDGVTLSSTYQTKIDVNPADLPDV 237
Query: 442 HELREWF-DSGGKNAATVS---ISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVR 497
+L W+ +GG N ++S + GG N K + +I++EG+GR KP++V VR
Sbjct: 238 KKLATWYVSTGGANVVSLSSQGLGAGGGGGGEGNRGRKYLDEIQSEGIGRGAKPEYVDVR 297
Query: 498 AFITFIKSDSFCYTACPLMIGDRQCNKKVTQS---GNRWQCDRCNQEIDECDYRYLLQAQ 554
+ K D+ Y ACP CNKKVT+ G+R++C++C+ + RYL+ Q
Sbjct: 298 CVPIYFKQDAQWYDACP------TCNKKVTEEGAQGDRFRCEKCDATVVPTQ-RYLVSIQ 350
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDD-VRFGEIIRSRVFNQYLFRLKI 613
+ D W+T F E+G E G A E LK Q+D + ++ ++R+ + RL++
Sbjct: 351 VTDNVSQVWLTLFNEAGVEFFGMEASE---LKRRAQEDPLYIAKLAQARMNRPVVMRLRV 407
Query: 614 KEE-----LYGDEQ-RVKITVIR 630
KEE + G+E R++++V+R
Sbjct: 408 KEETNANAMTGEESDRLRMSVVR 430
>gi|40317150|gb|AAR84278.1| putative replication protein A subunit 1 [Leishmania amazonensis]
Length = 467
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 145/447 (32%), Positives = 243/447 (54%), Gaps = 47/447 (10%)
Query: 207 RIIPIAALNPY-QGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
+I PI +L P+ G+W I+ARVT K D+R +N GK+FSF L+D + IR T FN
Sbjct: 8 QIQPIDSLTPFLGGKWWIRARVTDKTDVRTWNKPTSQGKLFSFTLID-ESAAIRATVFND 66
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDS--IPK 323
VD F +I G+VY S G +K A + F+++ N++E+ + +S + L ++ + +P
Sbjct: 67 AVDTFEPLIVNGQVYYFSGGQVKNANRRFSNVNNDYELTFDRSSEIMLARQDTSTAALPM 126
Query: 324 QQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSGRSVE 382
Q+++F I ++ E S+VDV+G+V+ V+ I +K+ G E +R + + D + +VE
Sbjct: 127 QRYNFVPIELLKQREVGSLVDVLGVVLKVDEVSSITQKSTGRELVKRNVKMGDMTA-AVE 185
Query: 383 LTLWGD----FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP-D 437
+T W D +C G V++++ KV F G + T++ INP D
Sbjct: 186 VTFWNDEAKAWCYPVG------------TVVALRQLKVGSFHGVPFSSTYQTKIDINPTD 233
Query: 438 FAEAHELREWF-DSGGKNAATVSISREIAAGGAKNEI---HKTVSQIKNEGLGRSEKPDW 493
+ +L W+ +GG N ++S AA GA E K + +I+++G+GR KP++
Sbjct: 234 LPDVKKLATWYVTTGGANVMSLSSQGLGAASGAGGESDRGRKYLDEIQSDGIGRGLKPEY 293
Query: 494 VTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQS---GNRWQCDRCNQEIDECDYRYL 550
V VR + K D+ Y ACP CNKKVT+ G+R++C++C++ + RYL
Sbjct: 294 VDVRCVPIYFKQDAQWYDACP------TCNKKVTEEGAQGDRFRCEKCDKTVTPTQ-RYL 346
Query: 551 LQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDD-VRFGEIIRSRVFNQYLF 609
+ Q+ D W+T F E+G E G A E LK Q+D + ++ + R+ +
Sbjct: 347 VSIQVTDNVSQAWLTLFNEAGIEFFGMEAAE---LKRRAQEDPLYIAKLAQGRMNRPVVM 403
Query: 610 RLKIKEE-----LYGDEQ-RVKITVIR 630
RL++KEE + G+E R++++V+R
Sbjct: 404 RLRVKEETSSNAMTGEESDRLRMSVVR 430
>gi|402471519|gb|EJW05236.1| replication factor-a protein 1 (rpa1) [Edhazardia aedis USNM 41457]
Length = 759
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 142/470 (30%), Positives = 239/470 (50%), Gaps = 57/470 (12%)
Query: 192 NFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL 251
NF+ + +N+ PIA++NP+Q +W+IK R T K D++++ NARG+GK+F+ ++
Sbjct: 337 NFQKNNLTEENKKHVENTPIASINPFQNKWSIKGRCTYKSDIKKFTNARGEGKLFTVNIS 396
Query: 252 DSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTV 311
D + G I+++ F+ VD F+ I E G+ ++I+KG +K A K ++ +++EI+L+ S V
Sbjct: 397 D-ETGTIKISAFSECVDMFFTIFENGKSFIITKGQVKMANKKYSTGTSDYEIYLDKNSEV 455
Query: 312 DLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRI 370
D+ P+ F+F I+++ + + + DVIG+V P+ I LR G E ++R
Sbjct: 456 TPIF--DEGAPRYFFNFVKINDLNISLHQA--DVIGVVKEAYPTSTITLRNTGKEQKKRD 511
Query: 371 LNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPST 430
+ D +G ++ LTLWG G L ++VG V++ + +++G + I T
Sbjct: 512 FVIIDETG-NIRLTLWG-----SGADLP--LEVG--DVIACNCLSIREYNGIVLSQISPT 561
Query: 431 QLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQ--------IKN 482
Q+ INPD E L+ W+++ GKN ++HK S+ I+N
Sbjct: 562 QVHINPDLEECFLLKGWYENEGKNI----------------KVHKKASEQRYLISDIIEN 605
Query: 483 EGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSG-NRWQCDRCNQE 541
E W + + I +S Y AC +C KKV G + ++C++CN+
Sbjct: 606 E-------MKWGSFIGTVLQINENSLYYQACI------ECKKKVIDEGEDVYRCEKCNKT 652
Query: 542 IDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRS 601
D+C +Y + QI D T F G+ G AK L L Q + II++
Sbjct: 653 FDQCIPKYTINLQIADFTSSIRAMVFDAQGDIFFGISAKHLVDLG---QKSSQIDLIIKN 709
Query: 602 RVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSF 651
++F+ +++E Y E R K V ++ NY SES+ LLD I KS
Sbjct: 710 SYLRDFIFKTSMRQESYQGETRNKYNVSSLEECNYISESKILLDEIRKSL 759
>gi|401885437|gb|EJT49554.1| hypothetical protein A1Q1_01298 [Trichosporon asahii var. asahii
CBS 2479]
Length = 387
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 144/439 (32%), Positives = 223/439 (50%), Gaps = 87/439 (19%)
Query: 21 KPLVQVMDIKLIGS------TQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQ 74
+P++QV+ +K I S +RYR ++SD +MLATQLN V+ +++K +V++
Sbjct: 24 EPVLQVLSVKRINSPASGAQATDRYRVILSDGEYFIQSMLATQLNHLVENDELEKNTVIK 83
Query: 75 LIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNN 134
L ++ +TVQNRK+I++L +E + + +GNP V V+
Sbjct: 84 LTSFVINTVQNRKLIIILALERQNWNGQKVGNP----------------------VNVDQ 121
Query: 135 YSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNA-----GSIVRSFQPTVQPPYQP 189
+A G ++P AP A G+ R +P P
Sbjct: 122 RAA-------------------GGVASP------APEAAPVTNGAASRGGASNARPAAAP 156
Query: 190 PPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFD 249
R+ GPI PI L+P W IKARVT K D++ ++N RG+GK+FS
Sbjct: 157 RGPSRDMGPIF---------PIEGLSP----WTIKARVTQKSDIKHWSNQRGEGKLFSVT 203
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
L+D + GEIR T FN VD FY+++E G+V+ ISK + A+K F+++ NE+EI E
Sbjct: 204 LMD-ETGEIRATGFNDQVDAFYQLLEEGKVFFISKARINIAKKQFSNVNNEYEITFENQ- 261
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMET-QR 368
TE + S+P+ +++F ++++ES + ++ DVIG+V V+ I K + +
Sbjct: 262 -----TEIEPSVPEIKYNFTKLNDLESLQKDATTDVIGVVQEVHDLGQITSKATQKPFNK 316
Query: 369 RILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIP 428
R + L D SG+SV LTLWG K E PV++ K KV+DF G+S+
Sbjct: 317 RDIQLVDQSGQSVRLTLWG--------KTAENFTHYDHPVVAFKGVKVSDFGGRSLSMFS 368
Query: 429 STQLFINPDFAEAHELREW 447
S + INP+ EA LR W
Sbjct: 369 SATMAINPNTDEACALRGW 387
>gi|2624702|pdb|1JMC|A Chain A, Single Stranded Dna-Binding Domain Of Human Replication
Protein A Bound To Single Stranded Dna, Rpa70 Subunit,
Residues 183-420
Length = 246
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 159/249 (63%), Gaps = 11/249 (4%)
Query: 206 ARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
++++PIA+L PYQ +W I ARVT K +R ++N+RG+GK+FS +L+D + GEIR T FN
Sbjct: 6 SKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVD-ESGEIRATAFNE 64
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQ 325
VD+F+ +IEV +VY SKG+LK A K F +KN++E+ ++V C E+D +P Q
Sbjct: 65 QVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPC-EDDHHLPTVQ 123
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELT 384
F F I ++E+ +S+VD+IGI S + I +R N E +R + L DTSG+ V T
Sbjct: 124 FDFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTAT 183
Query: 385 LWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHEL 444
LWG+ +K Q PVL++K +V+DF G+S+ + S+ + NPD EA++L
Sbjct: 184 LWGEDADKFDGSRQ--------PVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKL 235
Query: 445 REWFDSGGK 453
R WFD+ G+
Sbjct: 236 RGWFDAEGQ 244
>gi|294929957|ref|XP_002779439.1| replication protein A 70kDa, putative [Perkinsus marinus ATCC
50983]
gi|239888547|gb|EER11234.1| replication protein A 70kDa, putative [Perkinsus marinus ATCC
50983]
Length = 788
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 147/471 (31%), Positives = 242/471 (51%), Gaps = 44/471 (9%)
Query: 187 YQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVF 246
Y P + GP+ + IIPI+ L+ Y +W IK RV++K D+R + NARG+G++F
Sbjct: 296 YGGPQQPHSSGPVSYRPVASDIIPISQLSVYSQKWTIKGRVSSKSDVRTFVNARGEGQLF 355
Query: 247 SFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLE 306
S +L+D GEIR T FN+ V +FY I+ GRVY SKG +K A FN +E+
Sbjct: 356 SIELVDDQNGEIRATFFNSAVTKFYPAIQQGRVYTFSKGQVKQANARFNP-GAAYELTFN 414
Query: 307 ATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNP-SVPILRKNGME 365
+ ++ + D IP+ + I+ I+ + VD+ GI+ P S ++R G E
Sbjct: 415 DDAIIEEANDSAD-IPRILYKISKIATIQDRNADEFVDLCGIITHCAPISTIVVRNTGQE 473
Query: 366 TQRRILNLKDTSGRSVELTLWGDF---CNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK 422
RR + D SG S+E+T+WG+ C + ++Q + PV+ +K+ +++++ GK
Sbjct: 474 RARRNFTIVDDSGCSIEMTVWGETAQNCGVDENRVQ------YHPVVMIKNARISNYGGK 527
Query: 423 SIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKN 482
S+ T +T L ++PD + A E++ W+ GG+ A ++S A KTV +
Sbjct: 528 SLTTASTTTLEVDPDDSRAFEVKNWWLQGGQTGAVQALSSGGGG--AGGNAPKTVIDVMR 585
Query: 483 ---------EGLGRSEKPDWVTV------RAFITFI-KSDS--FCYTACPLMIGD----- 519
G S+ P+ V RA + I KS+ YT+C I D
Sbjct: 586 MDNNLYLSLSGQASSDVPNSRPVNTHNIPRATVAQIYKSNDKPLYYTSCITEIPDGRGGI 645
Query: 520 RQCNKKVTQ--SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGC 577
R+C+KKV Q S W C +Q +C RY++ ++ D +G V AF E + +LG
Sbjct: 646 RKCSKKVEQDISTGTWSCIEGHQN-PQCMPRYIISIKLADISGEVMVRAFDEQAQALLGV 704
Query: 578 PAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITV 628
A++ M+ +D++ +I + F + RL+ K+E+Y DE+RV +++
Sbjct: 705 SAQD--MMNGMGEDEIE--TLINNTQFKKINVRLRSKKEVYTDEERVNVSM 751
>gi|390367630|ref|XP_003731293.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Strongylocentrotus purpuratus]
Length = 575
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 198/362 (54%), Gaps = 20/362 (5%)
Query: 279 VYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAE 338
VY +S+G+LKPA + + + N++E+ + V+ C EED SIP QF F+ IS +E
Sbjct: 211 VYFVSRGTLKPANRQYTSINNDYELTFNNDTMVEPCVEEDVSIPAVQFDFKSISHLEDTP 270
Query: 339 NNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKL 397
+S++DVIG+ S + + ++ + E +R L L D S + +
Sbjct: 271 EDSMIDVIGVCKSTSDLTAVTIKSSNREVNKRSLQLVDDSQNEPLASNSAE--------- 321
Query: 398 QEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSG---GKN 454
E D PV++VK +++ F G+S+ + ++ +NPD +AH L+ W + ++
Sbjct: 322 AEDFDGSGNPVIAVKGARLSGFGGRSLSVLQNSIFQVNPDIPKAHHLKGWCLTARVTPQD 381
Query: 455 AATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACP 514
+ ++S + GG N T + + LG+ EKPD+ TV+ I F++ ++ Y ACP
Sbjct: 382 SQSISTRQGSGGGGGANTNWMTFHDVHAQNLGQGEKPDYFTVKGTILFVRKENCMYMACP 441
Query: 515 LMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEE 573
+CNKKV+++G+ ++C++C+++ + YR LL A + D T W T FQE+ E+
Sbjct: 442 ----SAECNKKVSENGDGSYRCEKCSKDYENFKYRLLLSANVADSTDNQWATCFQETAEQ 497
Query: 574 ILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQ 633
+L A+EL LK Q++ F ++ + F Y+FR++IK E Y +E R+K T + A
Sbjct: 498 LLLKSAQELGSLKD--QNEKEFNQVFQDACFIDYMFRMRIKMETYNEEARLKCTCVSAQP 555
Query: 634 VN 635
+N
Sbjct: 556 IN 557
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 63/238 (26%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLI-----GSTQERYRFLISDSVSTQHAMLATQLN 59
L+ +I+ I G+ S P++Q++ K + G +RYR ++SD T AMLATQLN
Sbjct: 5 LSRGAIAAIFRGENVSCPVLQLLACKKMNAAASGKAVDRYRLMLSDGEHTCTAMLATQLN 64
Query: 60 DRVKTGQVKKGSVVQLIDYICSTVQN-RKIIVVLNMETI---------ILDCEPIGNPKI 109
+ V TG++ + ++L +Y C+ + N R++IVVL+++ + I D P+ P
Sbjct: 65 EMVSTGELDVKAAMKLKNYSCNPIANDRRVIVVLDLDIVKKGSEIGVSIGDPTPMRAPGQ 124
Query: 110 FSESELTAQKTIP----SNNLPQPVRVNNY---SAPNSGTFNLQNSGTFNSQNPGSFSTP 162
Q++ P S++ PQ R +Y +AP S T N Q GTF Q+ +
Sbjct: 125 GGGPAPAQQQSRPDSTVSHDPPQTARPTSYGTGAAPASATPNKQ--GTFYGQSNSAM--- 179
Query: 163 NSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGR 220
GS +P ++ PI++L PYQ R
Sbjct: 180 ---------GGSTT---------------------------SPKKVQPISSLTPYQNR 201
>gi|84995782|ref|XP_952613.1| replication factor-a protein 1 [Theileria annulata strain Ankara]
gi|65302774|emb|CAI74881.1| replication factor-a protein 1, putative [Theileria annulata]
Length = 625
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 147/488 (30%), Positives = 241/488 (49%), Gaps = 48/488 (9%)
Query: 159 FSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQ 218
++P SG R V+ T+ PY PP N K + + I+ L Y
Sbjct: 148 LNSPVSGPVRKQENNRTVK----TISNPYDPPMN--------KGKKDVPLTKISDLTLYT 195
Query: 219 GRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGR 278
+W I+ARV K ++R++NN RG+ ++FS DL DS+G EIR F V+++Y +E G+
Sbjct: 196 PKWQIRARVVFKSEIRKFNNQRGESQLFSVDLCDSNG-EIRAVFFGESVNKWYSFLEEGQ 254
Query: 279 VYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAE 338
VY IS G LKPA K +N+LK+ E+ L+ +S + L + D+SIP +SF + +++ +
Sbjct: 255 VYSISGGQLKPANKRYNNLKHSCELILDESSYIQL-FQNDESIPSFCYSFTPLDQLQDIK 313
Query: 339 NNSIVDVIGIVISVNPSVPILRK-NGMETQRRILNLKDTSGRSVELTLWG---DFCNKEG 394
+ +DVI IV++ I K G ++R L D++ +V +T WG N EG
Sbjct: 314 SGETIDVIAIVVTARDLQKINNKATGNNVEKRDFLLCDSTNTTVWVTSWGQKTQLFNYEG 373
Query: 395 QKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKN 454
P++ +K KV ++ GK + STQ+ P EA +LR+W++ G N
Sbjct: 374 DNSH--------PLVCLKGVKVGEWQGKKLDVQISTQVICEPVIPEALKLRKWWNENGHN 425
Query: 455 AATVSISREIAAGGAKNEIHK--TVSQI---KNEGLG-RSEKPDWV--TVRAFITFIKSD 506
++ +E N +K T+S I N+GL +S + + T R I +K
Sbjct: 426 ---INFKQETVKTN-NNFFNKLCTISHIISSTNQGLQFKSIDSNGMVFTTRGLIEVLKDT 481
Query: 507 SFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTA 566
+FC+ +C C KK++ W C +CN + + Y+L +I D++ W +A
Sbjct: 482 NFCFPSC------TGCRKKMSNDQGCWYCSKCNSSTNPI-HLYILNIKIVDESSHIWASA 534
Query: 567 FQESGEEILGCPAKELYMLKYE---LQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQR 623
+ GE I+G A L L +++ F +Y+F++K E + DE R
Sbjct: 535 MADVGESIMGIKAYNLINLMERGPSNENEKSFINYFEDARLTEYIFKIKATVENFMDEPR 594
Query: 624 VKITVIRA 631
+K V++A
Sbjct: 595 IKYRVLKA 602
>gi|401410388|ref|XP_003884642.1| hypothetical protein NCLIV_050400 [Neospora caninum Liverpool]
gi|325119060|emb|CBZ54612.1| hypothetical protein NCLIV_050400 [Neospora caninum Liverpool]
Length = 919
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 146/463 (31%), Positives = 235/463 (50%), Gaps = 34/463 (7%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
IP+ L Y +W I+ARV KGD+R+YN ARG G++F+ +L D D GEIR T FN+ V
Sbjct: 466 FIPLKDLTAYVAKWTIRARVDVKGDIRKYNGARGPGQLFNVELKDKD-GEIRATFFNSAV 524
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI-FLEATSTVDLCTEEDDSIPK-QQ 325
D++Y +++ G+VY G +KP FNH ++++E+ F E +S V+ E IP +
Sbjct: 525 DKWYNVLQEGKVYYFRGGLVKPKNPRFNHTRHDYELTFDEKSSIVE--AEPGADIPSISR 582
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELT 384
I IE E NS V +I IV P I ++ G + +R + L D GRS+ LT
Sbjct: 583 ADLVDIRGIEEKEVNSTVSLIAIVHDYRPIQSITIKSTGQQKPKRDVFLVDEGGRSLALT 642
Query: 385 LWGDFCN--KEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAH 442
LWGD E Q Q+ P++ KS KV D++GK + + +T++ + PD +
Sbjct: 643 LWGDKTETIPEDQLSQK-------PIVLFKSVKVGDWNGKKLDSQGNTRIELFPDGNRSA 695
Query: 443 ELREWFD-SGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGR-----SEKPDWVTV 496
EL++W++ G + + SIS G + EI K++ Q+ E S+K + T
Sbjct: 696 ELQDWWNREGSQRGSFASISGGGGLGVGRKEILKSLEQVAQEAAQAEASVLSDKGVYATS 755
Query: 497 RAFITFIKSDSFCYTACPLMIGDRQCNKKVTQS-GNRWQCDRCNQEIDECDYRYLLQAQI 555
A + I D F + ACP C KK+++ WQC C ++ ++ ++ Y+L +
Sbjct: 756 CALLERIGDDRFSWPACP------DCRKKMSEEVTGCWQCPSCRKQCEQPNHTYMLNMSL 809
Query: 556 QDQTGLTWVTAFQESGEEILGCPAKELYMLKYE---LQDDVR-FGEIIRSRVFNQYLFRL 611
D TG + E EE +G E +L E L + R F +I +++FR+
Sbjct: 810 MDLTGSLRCSCMGEKAEEFMGNTKAETVLLLAEHRALDEQGRSFQDIFADANLEEWIFRI 869
Query: 612 KIKEELYGDEQRVKITVIRADQV--NYSSESRYLLDLISKSFR 652
K + + DE +K V+ A + ++++ LD + +F
Sbjct: 870 CSKYDSWMDEVSIKQRVVAAAPLFRRVGEQTQHRLDFVRTAFH 912
>gi|323449521|gb|EGB05408.1| hypothetical protein AURANDRAFT_11223 [Aureococcus anophagefferens]
Length = 366
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/375 (31%), Positives = 201/375 (53%), Gaps = 26/375 (6%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
P+A+LNPY RW +KA+V K D+ ++NARGDG +F L D+DG EI F +
Sbjct: 1 PVASLNPYMNRWTLKAKVAVKNDIVSWSNARGDGTLFKVTLADADGEEIEAVFFKEACAK 60
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD---SIPKQQF 326
++ + G VY S G +KP+ ++ K +E+ + S ++ C + I ++
Sbjct: 61 YHAALVEGGVYYFSGGKVKPSNPRYSATKCGYEVTFDMASKIEACADASGIGLCIGGTKY 120
Query: 327 SFRHISEIESAENNSIVDVIGIVISVNPSVPILRK--NGMETQRRILNLKDTSGRSVELT 384
F IS +E A+ ++DV+ +V + ++ + G +R + L D SG V LT
Sbjct: 121 DFVKISALEQADEGQVIDVLAVVKTAEDCAEVVSQKLGGKTLTKRDVTLVDASGVDVRLT 180
Query: 385 LWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG-KSIGTIPSTQLFINP-DFAEAH 442
LWG+ ++ PV+++K KV+++ G KS+G + S+++ P D A
Sbjct: 181 LWGERAKQD--------QFAAAPVVALKGVKVSEYQGTKSLGFLRSSRVAFEPEDAAGYE 232
Query: 443 ELREWFDSGGKNAATVSISR-EIAAGGAKNEI---HKTVSQIKNEG-LGRSEKPDWVTVR 497
EL+ W+ +GG +AA+ S+SR A GG K E + + +K++ G+ +KPD+ T +
Sbjct: 233 ELKAWWANGGASAASTSLSRVSNAGGGLKGEKFADRRGLQDLKDDARFGQGDKPDYATFK 292
Query: 498 AFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYRYLLQAQIQ 556
A + +K D Y +C GD C KKVTQ + + C++C +EC+ RY++
Sbjct: 293 ATLMKVKEDRLWYESC----GD-GCQKKVTQGTDGTYSCEKCGTTKEECERRYIVSCCFV 347
Query: 557 DQTGLTWVTAFQESG 571
D +G +WV+AF ++G
Sbjct: 348 DASGSSWVSAFNDAG 362
>gi|359484959|ref|XP_003633189.1| PREDICTED: LOW QUALITY PROTEIN: replication factor A protein 1-like
[Vitis vinifera]
Length = 390
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 212/385 (55%), Gaps = 19/385 (4%)
Query: 275 EVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEI 334
++G+VY ISKG++K A K F + L S V+ + E+ IP +F F I E+
Sbjct: 10 QLGKVYYISKGAIKVANKQFKTVHLHXXNALNENSEVEEGSNEETLIPXAKFKFVEIEEM 69
Query: 335 ESAEN-NSIVDVIGIVISVNPSVPILRKNGME-TQRRILNLKDTSGRSVELTLWGDFCNK 392
N V V G+V SV+P++ I RK+ + +R + D + ++V ++LW D
Sbjct: 70 GPYVNGKERVYVSGVVQSVSPTMRIQRKSHNDIVPKRDITFADKTKKTVVVSLWNDHATN 129
Query: 393 EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGG 452
GQ+L + D FP++++KS KV DF S+ T+ + + +NPD E +L W+DS
Sbjct: 130 VGQELLDNADK--FPIVAIKSLKVGDFQVVSLSTLSESIVLVNPDTRETKKLISWYDSEC 187
Query: 453 KNAATVSISREIA---AGGAKNEIHKTVSQ---IKNEGLGRSEKPDWVTVRAFITFIKSD 506
K A+ SI +I+ GG ++ + VS N LG +KP + ++RA+I+FIK D
Sbjct: 188 KGASMASIGSDISPSSKGGVRSMYYDRVSLSHVTSNPSLGE-DKPSFFSIRAYISFIKPD 246
Query: 507 -SFCYTACPLMIGDRQCNKKVTQS-GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWV 564
+ Y AC + CNKKVT + G+ + C+ C + DEC RY++ ++ D +G W+
Sbjct: 247 QTMWYRAC------KTCNKKVTDAIGSEYWCEGCQKNDDECSLRYIMVVKVSDASGEAWL 300
Query: 565 TAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRV 624
+ F + E I GC A EL LK + ++ F + ++ ++ LFR+ + + Y +E+R
Sbjct: 301 SLFNDQAERIFGCSADELDKLKSQEGEENLFQQKLKEAIWVPQLFRISVAQHEYMNEKRQ 360
Query: 625 KITVIRADQVNYSSESRYLLDLISK 649
+IT V++++ESR LL+ ISK
Sbjct: 361 RITARAVVPVDFAAESRLLLEEISK 385
>gi|312087571|ref|XP_003145524.1| replication factor A 73 kDa subunit [Loa loa]
Length = 607
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 166/633 (26%), Positives = 294/633 (46%), Gaps = 85/633 (13%)
Query: 21 KPLVQVMDIKLIGSTQ-------ERYRFLISDSVSTQHAML-ATQLNDRVKTGQVKKGSV 72
+P+VQ+++ + + ++Q + +RF ISD + + ++ L + +R+K + +G+
Sbjct: 24 RPVVQILEARPLVNSQAEPASEAQYFRFRISDGMFSYNSCLNQADITERIKRDTLDQGNP 83
Query: 73 VQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRV 132
V I Y Q + ++ +++ E + D G+P V
Sbjct: 84 VLRIQYTIKAAQ-KPLLRIMDYEILGRDLPIFGSP------------------------V 118
Query: 133 NNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPN 192
++ PN + NP + S R+P G + V+ Y +
Sbjct: 119 HHSGNPND----------YRGLNPNA-SMHTRIELRSPQKGGLNLGQNAPVR--YGGSSS 165
Query: 193 FRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLD 252
R L N + + PI + PY +W I VTAK DLR AR D KVF+F+L D
Sbjct: 166 RR-----LANLSGQNLTPIKLITPYVNKWRICGVVTAKEDLRNIRTARRDMKVFNFELTD 220
Query: 253 SDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVD 312
+GG IR+ F+ V ++FY II+ G ++ +S G++K A K FN +++EI + S V
Sbjct: 221 EEGGCIRIAAFDDVAEKFYSIIQKGSMFYVSGGTVKQANKRFNTTGHDYEITIRNDSEVL 280
Query: 313 LCTE-EDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRI 370
C + E PK S + + + I DVI I VN V + +N G + ++R
Sbjct: 281 PCLDREKIEQPKLSLSIVRLCNVANHVGEPI-DVIAIAEKVNDIVEVTARNTGAQLEKRD 339
Query: 371 LNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGTIPS 429
+ L D S + LT WG+ ++++ + +K V +++G S+ S
Sbjct: 340 IILIDASETEITLTFWGEQARTYDKEIEGQ-------TIGIKGAFVKEYNGNLSLSIGNS 392
Query: 430 TQLFINPDFAEAHELREWFDSG-----GKNAATVSISREIAAGGAKNEIHKTVSQIKNEG 484
+++ +N D AE L W+ +N T ++R+ + + +
Sbjct: 393 SRIELNMDCAETANLYRWYRETRPSVQARNLTTAGLTRDF----------RIIRLSEVGA 442
Query: 485 LGR-SEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEID 543
LGR SEK + V A I+ +K+D Y +C G C KKV + N+++C++C+ +D
Sbjct: 443 LGRDSEKGIFFNVTAMISSLKADGALYKSC----GTNGCKKKVIELNNQYRCEKCDITLD 498
Query: 544 ECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL-YMLKYELQDDVRFGEIIRSR 602
+ Y L+ +I D +G WVT F++ ++L A++L +L +L D+ + E+ +
Sbjct: 499 KYKYVLLMTVEISDFSGSHWVTVFEDKAVKLLKNDAEQLGQLLDNDLLDE--YNEVFNAV 556
Query: 603 VFNQYLFRLKIKEELYGDEQRVKITVIRADQVN 635
F +Y FR++ K E Y E+++K V +VN
Sbjct: 557 RFREYTFRIRAKSEFYNGEEKIKWNVFDIHEVN 589
>gi|359484858|ref|XP_003633177.1| PREDICTED: LOW QUALITY PROTEIN: replication factor A protein 1-like
[Vitis vinifera]
Length = 448
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 212/384 (55%), Gaps = 18/384 (4%)
Query: 275 EVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEI 334
++G+VY ISKG++K A K F + L S V+ + E+ IP +F F I E+
Sbjct: 69 QLGKVYYISKGAIKVANKXFKTVHLHXXNALNENSEVEEGSNEETLIPXAKFKFVEIEEM 128
Query: 335 ESAEN-NSIVDVIGIVISVNPSVPILRKNGME-TQRRILNLKDTSGRSVELTLWGDFCNK 392
N V V G+V SV+P++ I RK+ + +R + D + ++V ++LW D
Sbjct: 129 GPYVNGKECVYVSGVVQSVSPTMRIRRKSHNDIVPKRDITFADKTKKTVVVSLWNDHATN 188
Query: 393 EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGG 452
GQ+L + D FP++++KS KV DF S+ T+ + + +NPD E +L W+DS
Sbjct: 189 VGQELLDNADK--FPIVAIKSLKVGDFQVVSLSTLSESIVLVNPDTREXKKLISWYDSEC 246
Query: 453 KNAATVSISREIA--AGGAKNEIHKTVSQ---IKNEGLGRSEKPDWVTVRAFITFIKSD- 506
K A+ SI +I+ GG ++ + VS N LG +KP + ++RA+I+FIK D
Sbjct: 247 KGASMASIRSDISPSKGGVRSMYYDRVSLSHVTSNPSLGE-DKPSFFSIRAYISFIKPDQ 305
Query: 507 SFCYTACPLMIGDRQCNKKVTQS-GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVT 565
+ Y AC + CNKKVT + G+ + C+ C + DEC RY++ ++ D +G W++
Sbjct: 306 TMWYRAC------KTCNKKVTDAIGSGYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLS 359
Query: 566 AFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVK 625
F + E I GC A EL LK + ++ F + ++ ++ LFR+ + + Y +E+R +
Sbjct: 360 LFNDQAERIFGCSADELDKLKSQEGEENLFQQKLKEAIWVPQLFRISVAQHEYMNEKRQR 419
Query: 626 ITVIRADQVNYSSESRYLLDLISK 649
IT V++++ESR LL+ ISK
Sbjct: 420 ITARAVVPVDFAAESRLLLEEISK 443
>gi|58372552|gb|AAW71479.1| replication protein A large subunit [Cryptosporidium parvum]
Length = 688
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 235/486 (48%), Gaps = 76/486 (15%)
Query: 198 PILKN-EAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAR-GDGKVFSFDLLDSDG 255
P+ +N E P + PI + Y RW I RV +K D+R++++++ +GKVFSF++ D+DG
Sbjct: 182 PVSRNQEIP--VYPIKNITSYLHRWRIVGRVVSKSDIRKFSSSKTKEGKVFSFEICDADG 239
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
EIR TCF VD+FY++++ G VY S+G +K A FN +E+EI + +
Sbjct: 240 SEIRATCFTKAVDKFYDMLKEGEVYSFSRGDVKEANTRFNTTGHEFEIIFHEDAEIQ-SL 298
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLK 374
+DD IPK+ F+F ISEI +D++GI++ P I ++ G +TQ+R L +
Sbjct: 299 PQDDRIPKKTFNFVPISEIRGYSKGQSLDLLGILLKAGPITTITVKSTGADTQKRELTII 358
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFF---PVLSVKSGKVNDFSGKSIGTIPSTQ 431
D SG S++LTLW + + +D G PV++VK+ V +F+G + S+
Sbjct: 359 DKSGHSIDLTLWSE---------RTHLDEGLISQNPVIAVKNAIVEEFNGFRLKLGSSSS 409
Query: 432 LFINPDFAE-AHELREWFDS------------------GGKNAATVSISREIAAGGAKNE 472
+ NP E + EL+ WF S G N+++ + I A
Sbjct: 410 IEWNPSGVEQSQELKNWFFSQSNLHESVVSLSSSSPSPGNTNSSSSAKRLSIDEIVATAT 469
Query: 473 IHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ---- 528
+ S + + G+ WV I I+ + + +++CP +C +KVT+
Sbjct: 470 SGSSSSDMLDGGI-------WVHTYGTIRSIRDNKYYWSSCP------KCKRKVTEIEDP 516
Query: 529 -------------------SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQE 569
G + C C Q I+ +Y+L +I D TG AF E
Sbjct: 517 NSINALVLPYGSEKETSTSLGPNYHCPSCQQSIENPIKKYILSCEIVDSTGTIRAVAFAE 576
Query: 570 SGEEIL-GCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITV 628
GE I+ G ++L LK + + ++F++++F+L K+ELY D + +K +
Sbjct: 577 HGETIMDGLSPEKLESLKENTDKNTE--DCFSDKLFSEWVFKLNGKKELYQDSEIIKYRI 634
Query: 629 IRADQV 634
A+ +
Sbjct: 635 FSAEDM 640
>gi|66363290|ref|XP_628611.1| Rf-A (OB fold protein) [Cryptosporidium parvum Iowa II]
gi|46229828|gb|EAK90646.1| Rf-A (OB fold protein) [Cryptosporidium parvum Iowa II]
Length = 707
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 235/486 (48%), Gaps = 76/486 (15%)
Query: 198 PILKN-EAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARG-DGKVFSFDLLDSDG 255
P+ +N E P + PI + Y RW I RV +K D+R++++++ +GKVFSF++ D+DG
Sbjct: 201 PVSRNQEIP--VYPIKNITSYLHRWRIVGRVVSKSDIRKFSSSKTKEGKVFSFEICDADG 258
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
EIR TCF VD+FY++++ G VY S+G +K A FN +E+EI + +
Sbjct: 259 SEIRATCFTKAVDKFYDMLKEGEVYSFSRGDVKEANTRFNTTGHEFEIIFNEDAEIQ-SL 317
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLK 374
+DD IPK+ F+F ISEI +D++GI++ P I ++ G +TQ+R L +
Sbjct: 318 PQDDRIPKKTFNFVPISEIRGYSKGQSLDLLGILLKAGPITTITVKSTGADTQKRELTII 377
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFF---PVLSVKSGKVNDFSGKSIGTIPSTQ 431
D SG S++LTLW + + +D G PV++VK+ V +F+G + S+
Sbjct: 378 DKSGHSIDLTLWSE---------RTHLDEGLISQNPVIAVKNAIVEEFNGFRLKLGSSSS 428
Query: 432 LFINPDFAE-AHELREWFDS------------------GGKNAATVSISREIAAGGAKNE 472
+ NP E + EL+ WF S G N+++ + I A
Sbjct: 429 IEWNPSGVEQSQELKNWFFSQSNLHESVVSLSSSSPSPGNTNSSSSAKRLSIDEIVATAT 488
Query: 473 IHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ---- 528
+ S + + G+ WV I I+ + + +++CP +C +KVT+
Sbjct: 489 SGSSSSDMLDGGI-------WVHTYGTIRSIRDNKYYWSSCP------KCKRKVTEIEDP 535
Query: 529 -------------------SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQE 569
G + C C Q I+ +Y+L +I D TG AF E
Sbjct: 536 NSINALVLPYGSEKETSTSLGPNYHCPSCQQSIENPIKKYILSCEIVDSTGTIRAVAFAE 595
Query: 570 SGEEIL-GCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITV 628
GE I+ G ++L LK + + ++F++++F+L K+ELY D + +K +
Sbjct: 596 HGETIMDGLSPEKLESLKENTDKNTE--DCFSDKLFSEWVFKLNGKKELYQDSEIIKYRI 653
Query: 629 IRADQV 634
A+ +
Sbjct: 654 FSAEDM 659
>gi|393910914|gb|EFO18545.2| replication factor A 73 kDa subunit [Loa loa]
Length = 612
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 167/633 (26%), Positives = 294/633 (46%), Gaps = 80/633 (12%)
Query: 21 KPLVQVMDIKLIGSTQ-------ERYRFLISDSVSTQHAML-ATQLNDRVKTGQVKKGSV 72
+P+VQ+++ + + ++Q + +RF ISD + + ++ L + +R+K + +G+
Sbjct: 24 RPVVQILEARPLVNSQAEPASEAQYFRFRISDGMFSYNSCLNQADITERIKRDTLDQGNP 83
Query: 73 VQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRV 132
V I Y Q + ++ +++ E + D G+P V
Sbjct: 84 VLRIQYTIKAAQ-KPLLRIMDYEILGRDLPIFGSP------------------------V 118
Query: 133 NNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPN 192
++ PN + NP + S R+P G + V+ Y +
Sbjct: 119 HHSGNPND----------YRGLNPNA-SMHTRIELRSPQKGGLNLGQNAPVR--YGGSSS 165
Query: 193 FRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLD 252
R L N + + PI + PY +W I VTAK DLR AR D KVF+F+L D
Sbjct: 166 RR-----LANLSGQNLTPIKLITPYVNKWRICGVVTAKEDLRNIRTARRDMKVFNFELTD 220
Query: 253 SDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVD 312
+GG IR+ F+ V ++FY II+ G ++ +S G++K A K FN +++EI + S V
Sbjct: 221 EEGGCIRIAAFDDVAEKFYSIIQKGSMFYVSGGTVKQANKRFNTTGHDYEITIRNDSEVL 280
Query: 313 LCTE-EDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRI 370
C + E PK S + + + I DVI I VN V + +N G + ++R
Sbjct: 281 PCLDREKIEQPKLSLSIVRLCNVANHVGEPI-DVIAIAEKVNDIVEVTARNTGAQLEKRD 339
Query: 371 LNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGTIPS 429
+ L D S + LT WG+ ++++ + +K V +++G S+ S
Sbjct: 340 IILIDASETEITLTFWGEQARTYDKEIEGQ-------TIGIKGAFVKEYNGSLSLSIGNS 392
Query: 430 TQLFINPDFAEAHELREWFDSG-----GKNAATVSISREIAAGGAKNEIHKTVSQIKNEG 484
+++ +N D AE L W+ +N T +S + A + + +
Sbjct: 393 SRIELNMDCAETANLYRWYRETRPSVQARNLTTAGLSSDNYARD-----FRIIRLSEVGA 447
Query: 485 LGR-SEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEID 543
LGR SEK + V A I+ +K+D Y +C G C KKV + N+++C++C+ +D
Sbjct: 448 LGRDSEKGIFFNVTAMISSLKADGALYKSC----GTNGCKKKVIELNNQYRCEKCDITLD 503
Query: 544 ECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL-YMLKYELQDDVRFGEIIRSR 602
+ Y L+ +I D +G WVT F++ ++L A++L +L +L D+ + E+ +
Sbjct: 504 KYKYVLLMTVEISDFSGSHWVTVFEDKAVKLLKNDAEQLGQLLDNDLLDE--YNEVFNAV 561
Query: 603 VFNQYLFRLKIKEELYGDEQRVKITVIRADQVN 635
F +Y FR++ K E Y E+++K V +VN
Sbjct: 562 RFREYTFRIRAKSEFYNGEEKIKWNVFDIHEVN 594
>gi|71030044|ref|XP_764664.1| replication factor A protein [Theileria parva strain Muguga]
gi|68351620|gb|EAN32381.1| replication factor A protein, putative [Theileria parva]
Length = 458
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 145/482 (30%), Positives = 240/482 (49%), Gaps = 55/482 (11%)
Query: 159 FSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQ 218
++P SG R V+ T+ PY PP N K + + I+ L Y
Sbjct: 4 LNSPVSGPVRKQENSRTVK----TISNPYDPPVN--------KTKKDVPLTKISDLTLYT 51
Query: 219 GRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGR 278
+W+I+ARV K ++R++NN RG+ ++FS DL DS+G EIR F V+++Y +E G+
Sbjct: 52 PKWSIRARVVFKSEIRKFNNQRGESQLFSVDLCDSNG-EIRAVFFGESVNKWYSFLEEGQ 110
Query: 279 VYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAE 338
VY IS G LKPA K FN+LK+ E+ L+ +S + L + D+SIP +SF + +++ +
Sbjct: 111 VYSISGGQLKPANKRFNNLKHTCELILDESSHIQL-FQNDESIPSFCYSFTPLDQLQDVK 169
Query: 339 NNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSGRSVELTLWG---DFCNKEG 394
+ +DVI IV++ I K+ G ++R L D++ +V +T WG N +G
Sbjct: 170 SGETIDVIAIVVTAKDVQKINNKSTGNNVEKRDFLLCDSTNTTVWVTSWGQKTQLFNYQG 229
Query: 395 QKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKN 454
+ + V ++ GK + STQ+ P EA +LR+W++ +N
Sbjct: 230 ENSHPL---------------VGEWQGKKLDVQGSTQVICEPVIPEALKLRKWWN---EN 271
Query: 455 AATVSISREIA--AGGAKNEIHKTVSQI---KNEGLG-RSEKPDWV--TVRAFITFIKSD 506
+ V+ +E++ N++ T+S I N+GL +S + + T RA I +K
Sbjct: 272 SQNVNFQQEVSKTTNSTFNKLC-TISHIISSTNQGLQFKSIDSNGMVFTTRALIEVLKDT 330
Query: 507 SFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTA 566
+FC+ +C C KK+T W C +CN + + Y+L +I D+T W TA
Sbjct: 331 NFCFPSC------TGCRKKMTNDQGIWYCPKCNSSTNPV-HLYILNIKIVDETSHIWATA 383
Query: 567 FQESGEEILGCPAKELYMLKY---ELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQR 623
+ GE I+G A +L L +++ F +Y+F++K E + DE R
Sbjct: 384 MSDVGESIMGIKAYKLIKLMENGPSDENEKNFVNYFEDARLTEYIFKIKATVENFMDEPR 443
Query: 624 VK 625
+K
Sbjct: 444 IK 445
>gi|238502014|ref|XP_002382241.1| replication protein A 70 kDa DNA-binding subunit [Aspergillus
flavus NRRL3357]
gi|220692478|gb|EED48825.1| replication protein A 70 kDa DNA-binding subunit [Aspergillus
flavus NRRL3357]
Length = 375
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 217/385 (56%), Gaps = 24/385 (6%)
Query: 270 FYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
Y++ + G VY IS +K A+K F +L N++E+ E + V+ ++ D +P+ +FSF
Sbjct: 2 LYDVFQEGSVYYISSPCGVKLAKKQFTNLNNDYELTFERDTVVEKAEDQAD-VPQIRFSF 60
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILNLKDTSGRSVELTLWG 387
I +++S E ++ +DVIG++ V I+ K + +R L L D++G SV LT+WG
Sbjct: 61 TTIGDLQSVEKDTTIDVIGVLKEVAEVSQIMSKTTNKPYNKRELTLVDSTGFSVRLTVWG 120
Query: 388 DFCNKEGQKLQEMVDVGFFP--VLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELR 445
++ P V++ K KV+DF G+S+ + S + ++PD EAH+L+
Sbjct: 121 ----------STALNFNVTPESVIAFKGVKVSDFGGRSLSLLSSGSMTVDPDIEEAHKLK 170
Query: 446 EWFDSGGKNAATVSISRE--IAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFI 503
W+D+ G++ S + +AA K E KTV+Q+K E LG S++ + +++A + +I
Sbjct: 171 GWYDAQGRDGVFASHASMPGVAASTTKLEQFKTVAQVKEEQLGMSDEVAYFSLKATVIYI 230
Query: 504 KSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLT 562
K D+ CY AC L G CNKKVT+ +W+C+RC++ +YRY++ + D TG
Sbjct: 231 KQDTMCYPAC-LSEG---CNKKVTELDPGQWRCERCDKTHPRPEYRYIMLISVSDHTGQL 286
Query: 563 WVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQ 622
+++ F E G ++G A +L ++ DD G+I + + FR + K + +GD+Q
Sbjct: 287 YLSCFDEVGRYMMGTSADQL--MEIRQNDDKAAGDIFQDANCRTWNFRCRAKIDNFGDQQ 344
Query: 623 RVKITVIRADQVNYSSESRYLLDLI 647
R++ ++ A VNYS E+ L ++I
Sbjct: 345 RIRCQIVTAKPVNYSEEALRLANMI 369
>gi|67603419|ref|XP_666551.1| replication protein A 70kDa [Cryptosporidium hominis TU502]
gi|54657572|gb|EAL36324.1| replication protein A 70kDa [Cryptosporidium hominis]
Length = 686
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 234/486 (48%), Gaps = 76/486 (15%)
Query: 198 PILKN-EAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAR-GDGKVFSFDLLDSDG 255
P+ +N E P + PI + Y RW I RV +K D+R++++++ +GKVFSF++ D+DG
Sbjct: 180 PVSRNQEIP--VYPIKNITSYLHRWRIVGRVVSKSDIRKFSSSKTKEGKVFSFEICDADG 237
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
EIR TCF VD+FY++++ G VY S+G +K A FN +E+EI + +
Sbjct: 238 SEIRATCFTKAVDKFYDVLKEGEVYSFSRGDVKEANTRFNTTGHEFEIIFNEDAEIQ-SL 296
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLK 374
+DD IPK+ F+F ISEI +D++GI++ P I ++ G +TQ+R L +
Sbjct: 297 PQDDRIPKKTFNFVPISEIRGYSKGQSLDLLGILLKAGPITTITVKSTGADTQKRELTII 356
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFF---PVLSVKSGKVNDFSGKSIGTIPSTQ 431
D SG S++LTLW + + +D G PV++VK+ V +F+G + S+
Sbjct: 357 DKSGHSIDLTLWSE---------RTHLDEGLISQNPVIAVKNAIVEEFNGFRLKLGSSSS 407
Query: 432 LFINPDFAE-AHELREWFDS------------------GGKNAATVSISREIAAGGAKNE 472
+ NP E + EL+ WF S G N+ + + I A
Sbjct: 408 IEWNPSGVEQSQELKNWFFSQSNLHESVVSLSSSSPSPGNTNSNSSAKRLSIDEIVATAT 467
Query: 473 IHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ---- 528
+ S + + G+ WV I I+ + + +++CP +C +KVT+
Sbjct: 468 SGSSSSDMLDGGI-------WVHTYGTIRSIRDNKYYWSSCP------KCKRKVTEIEDP 514
Query: 529 -------------------SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQE 569
G + C C Q I+ +Y+L +I D TG AF E
Sbjct: 515 NSINALVLPYGSEKETSTSLGPNYHCPSCQQSIENPIKKYILSCEIVDSTGTIRAVAFAE 574
Query: 570 SGEEIL-GCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITV 628
GE I+ G ++L LK + + ++F++++F+L K+ELY D + +K +
Sbjct: 575 HGETIMDGLSPEKLESLKENTDKNTE--DCFSDKLFSEWVFKLNGKKELYQDSEIIKYRI 632
Query: 629 IRADQV 634
A+ +
Sbjct: 633 FSAEDM 638
>gi|82539990|ref|XP_724343.1| replication A protein [Plasmodium yoelii yoelii 17XNL]
gi|23478957|gb|EAA15908.1| putative replication A protein [Plasmodium yoelii yoelii]
Length = 1168
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 144/449 (32%), Positives = 234/449 (52%), Gaps = 38/449 (8%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
++PI L+ Y +W IKARV +K ++R++ +GKVF+ +L D + GEI+V F V
Sbjct: 706 LMPINKLSQYSTKWIIKARVQSKDNIRKFYTGNKEGKVFNIELCD-ESGEIKVNFFGKAV 764
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D++Y+ +EVG++Y ISKG++K A K FN LK++ EI L+ S ++L E D +IPK ++
Sbjct: 765 DKWYDYLEVGKIYKISKGNIKSANKKFNTLKHDCEITLDENSILELLEENDMNIPKYIYN 824
Query: 328 FRHISEIESAENN-SIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTL 385
F ISEI++ N ++VDVIGIV+S IL +K G +++ L L D + ++ +TL
Sbjct: 825 FYSISEIKANMNTGTLVDVIGIVLSFQELNQILIKKTGQYKEKKDLMLIDETNETINVTL 884
Query: 386 WGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELR 445
WG+ K++EM ++ ++ K KV ++ GK + + P T++ INP+ +A+ L+
Sbjct: 885 WGE----NAVKMEEM-NITENCIICFKCLKVGEWQGKKLESHPKTKVEINPELDKAYTLK 939
Query: 446 EWFDSGGKNAATVSISREIAAGGA--KNEIHKTVSQI-KNEGLGRSE----KPDWVTVRA 498
W+ + KN + E KT+ +I KN L E K T
Sbjct: 940 NWWVNNKKNVYNTINLTTTTSNNNMLNLESQKTIQEIKKNVNLANEEVLSGKGIIFTTFG 999
Query: 499 FITFIKSDSFCYTACPLMIGDRQCNKK----VTQSGNR---------WQCDRCNQEIDEC 545
FI I + Y+ACP CNKK V + G + C +CN+
Sbjct: 1000 FIDHIYNAIPVYSACP------NCNKKMVATVIEDGEQDMDQNVSESMYCAKCNKNNIPV 1053
Query: 546 DYRYLLQAQIQDQTGLTWVTAFQESGEEIL-GCPAKELYMLKYEL--QDDVRFGEIIRSR 602
Y Y + +I D T V+AF S + I+ G A+E L+ E Q+++ ++I
Sbjct: 1054 -YNYSINLKITDNTDSLRVSAFANSAKTIMNGLSAEEFMKLRQEYISQENIENFDLIEKA 1112
Query: 603 VFNQYLFRLKIKEELYGDEQRVKITVIRA 631
N++ FR+K + DE + T++
Sbjct: 1113 KLNEFFFRIKAYMTSHMDEIKKNYTILET 1141
>gi|429327218|gb|AFZ78978.1| replication factor-A protein 1, putative [Babesia equi]
Length = 646
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 137/431 (31%), Positives = 214/431 (49%), Gaps = 30/431 (6%)
Query: 209 IPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
+ I L Y +W I ARV K ++R++NN RG+ ++FS DL D+ G EIR F V
Sbjct: 190 VKITDLTLYTPKWLIHARVVYKTEIRKFNNQRGESQLFSADLCDAHG-EIRAIFFGEAVT 248
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
++Y +E G+VY IS G LKPA K FN LK+ E+ L+ S + L + DD IP +F
Sbjct: 249 KWYSFLEEGQVYSISGGQLKPANKRFNALKHSCEMILDENSHIQL-FQNDDKIPSICCTF 307
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVPILRK-NGMETQRRILNLKDTSGRSVELTLWG 387
+++++ + +DVIG+V+ N S I +K G +++ + + D++ ++ LTLWG
Sbjct: 308 TPLNQLDDIKIGESIDVIGVVVKTNDSQSIQQKGTGNVIEKKDVFIVDSTRTTICLTLWG 367
Query: 388 DFCNKEGQKLQEMVDVG--FFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELR 445
+ K Q + G PV+ +K KVN + GK + STQ+ I P EA ELR
Sbjct: 368 N-------KTQALNGKGSDSHPVICLKGVKVNSWQGKKLDAQGSTQITIEPVIPEALELR 420
Query: 446 EWF-DSGGKNA------ATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRA 498
+W+ + GK ++S ++A + + L T RA
Sbjct: 421 KWWTNVKGKRIIDSPFNELCTLSHIVSATNQALQFKCKFDTVLTLFLAIDSNGMVFTTRA 480
Query: 499 FITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQ 558
I ++ +SF + ACP C K++ G+RW C RCN + Y+L +I D
Sbjct: 481 LIEILRDNSFSWPACP------GCRKRMVNEGDRWNCTRCNSSSSPI-HLYMLTLKIVDG 533
Query: 559 TGLTWVTAFQESGEEIL-GCPAKELYMLKYELQDDV---RFGEIIRSRVFNQYLFRLKIK 614
T WVTAF GE I+ G A E L + D F + ++++F++K
Sbjct: 534 TSHLWVTAFTGVGESIMNGVKAFEAVTLAEKGGVDANGRNFSNLFEEARLSEFVFKIKAT 593
Query: 615 EELYGDEQRVK 625
E + DE ++K
Sbjct: 594 VENFMDEPKIK 604
>gi|195108851|ref|XP_001999006.1| GI24277 [Drosophila mojavensis]
gi|193915600|gb|EDW14467.1| GI24277 [Drosophila mojavensis]
Length = 557
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 142/452 (31%), Positives = 226/452 (50%), Gaps = 35/452 (7%)
Query: 202 NEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVT 261
N+ +IPIA L+PY+ +W IKARV+ K + Y G++F+ +L D GEIRVT
Sbjct: 130 NQINEEVIPIAHLSPYKHKWIIKARVSGKTRIFSYKG----GRLFNMNLFDK-SGEIRVT 184
Query: 262 CFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSI 321
F D+F+ +I+ G VY I+ G +KPA ++ LKNE+E+ + V LC + D I
Sbjct: 185 AFKDQCDKFHSLIDDGNVYFIANGWIKPANTQYSQLKNEFEMIFIGETMVQLCDDNGD-I 243
Query: 322 PKQQFSFRHISEIESAENNSIVDVIGIVISVNP-SVPILRKNGMETQRRILNLKDTSGRS 380
P+ +F +S + + N V+ IGI V + I K E ++R L L D S +
Sbjct: 244 PEVKFDLIPLSHVSNMGNKEAVNTIGICTEVGKLDIRISTKTNKEFKKRELTLVDMSNAA 303
Query: 381 VELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG-KSIGTIPSTQLFINPDFA 439
V LTLWGD +Q V+ VK +VN++ KS+ + L INPD
Sbjct: 304 VTLTLWGDEAVNFDGHVQS--------VILVKGSRVNEYGDWKSLNVGWGSTLKINPDIP 355
Query: 440 EAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAF 499
EAH+LR WFD+GG A + +R + K+ + LG ++PD+ A
Sbjct: 356 EAHKLRVWFDNGG--ADNIVSARRVELMTLKDAYFRN--------LGSGDRPDYFQCIAI 405
Query: 500 I-TFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQD 557
+ I++++F Y ACP M CNKKV G+ ++C+ C+ Y ++ +I D
Sbjct: 406 VQNVIQTNAF-YKACPQM----NCNKKVVDVGDGLYRCESCDAVSPNFKYILRVKIKISD 460
Query: 558 QTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEEL 617
T V F + GE++L +E+ ++ D R +I + Y+F+L K +L
Sbjct: 461 YTSDREVICFGKIGEQLLRHTTQEV--VEALENDPARALQIFTDINYTLYIFKLSCKNKL 518
Query: 618 YGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
Y + +TV N +++L++ I++
Sbjct: 519 YNGKMISTLTVQSMTPFNCKKYNKHLINEINQ 550
>gi|361128289|gb|EHL00233.1| putative Replication factor A protein 1 [Glarea lozoyensis 74030]
Length = 365
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 195/359 (54%), Gaps = 16/359 (4%)
Query: 290 AQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIV 349
A+K F+++ N++E+ + + V+ C +++D +P+ +++F +I ++ E +S +DVIG++
Sbjct: 16 AKKQFSNINNDYELAFDKDTIVEKCEDQND-VPQVRYNFTNIGALQEVEKDSTIDVIGVL 74
Query: 350 ISVNPSVPILRKNGME-TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPV 408
VN I+ K + +R L L D SG SV++T+WG K D +
Sbjct: 75 KEVNDVNQIVSKTTQQPYDKRDLTLVDDSGYSVKMTIWG--------KTATKFDANPEQI 126
Query: 409 LSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGG 468
++ K KV+DF+GKS+ + S + I+PD AEA++L+ W+DS G++ + + A G
Sbjct: 127 VAFKGAKVSDFNGKSLSLLSSGSMSIDPDIAEAYKLKGWYDSNGRSETFAAHTSTAGAAG 186
Query: 469 AKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ 528
+N KTV+Q+K+E LG ++K D+ V+A I +IK D Y AC CNKKV +
Sbjct: 187 GRNNELKTVAQVKDENLGMNDKDDYFAVKATIVYIKQDPISYPAC----ASENCNKKVIE 242
Query: 529 SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYE 588
W C CN + +R+++ + D TG +++ F + G I+G +L LK
Sbjct: 243 DNGYWTCASCNINHPKPQHRFIMTVNVSDHTGSFYLSCFDDVGRLIMGMNGDQLMELK-- 300
Query: 589 LQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
D+ + Y F + K + Y D+QRV+ V+RA +++ E+R L +LI
Sbjct: 301 ETDNEAVNKAFEDANCKTYTFTCRAKMDTYQDQQRVRYQVLRAAPIDFKQEARKLTELI 359
>gi|221507849|gb|EEE33436.1| replication factor, putative [Toxoplasma gondii VEG]
Length = 458
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 146/464 (31%), Positives = 236/464 (50%), Gaps = 39/464 (8%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
IP+ L Y +W I+ARV KGD+R+YN ARG G++F+ +L D DG EIR T FNA V
Sbjct: 6 FIPLKDLTAYVAKWTIRARVDVKGDIRKYNGARGPGQLFNVELKDKDG-EIRATFFNAAV 64
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI-FLEATSTVDLCTEEDDSIPK-QQ 325
D++Y I++ G+VY GS+KP FNH ++++E+ F E +S V+ E IP +
Sbjct: 65 DKWYNILQEGKVYYFRGGSVKPKNPRFNHTRHDYELTFDEKSSIVE--AESGADIPSISR 122
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELT 384
I IE E NS V +I IV P I ++ G + +R + L D GRS+ LT
Sbjct: 123 ADLVDIRGIEEKEVNSTVSLIAIVHDYRPIQSITIKSTGQQKPKRDVFLVDEGGRSLVLT 182
Query: 385 LWGDFCNK--EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAH 442
LWG+ E Q Q+ P++ +KS KV D++G+ + + ST++ + PD A
Sbjct: 183 LWGEKTETLPEEQLCQK-------PLVLLKSVKVGDWNGRKLDSQGSTRVELFPDGNRAA 235
Query: 443 ELREWFDSGGKNAATVSISREIAAGG---AKNEIHKTVSQIKNEGLGR-----SEKPDWV 494
E+++W++ G + + ++ GG + EI K++ Q+ E S+K +
Sbjct: 236 EVQDWWNQEGSRRGSFA---SLSGGGLAVGRKEILKSLEQVAQEAAQAEAAVLSDKGVYA 292
Query: 495 TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNR-WQCDRCNQEIDECDYRYLLQA 553
T A + I D F + ACP C KK+ + R WQC C ++ ++ ++ Y+L
Sbjct: 293 TSCALLERIGDDRFSWPACP------DCRKKMNEEMPRCWQCPSCRKQCEQPNHTYMLNL 346
Query: 554 QIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYE---LQDDVR-FGEIIRSRVFNQYLF 609
+ D TG + E EE + E +L E L + R F +I +++F
Sbjct: 347 SLMDLTGSLRCSCIGEKAEEFMANTKAETVLLLAEHRALDEQGRSFQDIFADANLEEWIF 406
Query: 610 RLKIKEELYGDEQRVKITVIRADQV--NYSSESRYLLDLISKSF 651
R+ K + + DE +K V+ A + ++++ LD + +F
Sbjct: 407 RICSKYDSWMDEVSIKQRVVAAAPLFRRVGEQTQHRLDFVRTAF 450
>gi|302817221|ref|XP_002990287.1| hypothetical protein SELMODRAFT_131333 [Selaginella moellendorffii]
gi|300141996|gb|EFJ08702.1| hypothetical protein SELMODRAFT_131333 [Selaginella moellendorffii]
Length = 421
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 135/436 (30%), Positives = 222/436 (50%), Gaps = 28/436 (6%)
Query: 209 IPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
+PI +N + RW+++ARVT KG L + G V S D+ D++ EIR+ F
Sbjct: 1 MPIKDINDHCYRWSLRARVTHKGKLVFFETGTA-GCVMSVDVADAESSEIRIVGFGENAK 59
Query: 269 RFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD-SIPKQQF 326
R IE G VY+ S S ++ ++ + K+ WEI +A+ T+++ EDD IP
Sbjct: 60 RLSSEIEQGSVYIFSGNSGVQRSKPAYTPYKSNWEI--KASKTMEIKRVEDDLRIPNVVL 117
Query: 327 SFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLW 386
+ + + VDVIG V+ + + +G +RR+L L D SG S+++ LW
Sbjct: 118 KRTSVLDASKLSQETFVDVIGGVMWIGQKNISPKDSGAFMRRRMLCLSDESGHSIDMCLW 177
Query: 387 GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELRE 446
EG ++++ + G P++ VK G+++D++GKSI + L ++P+ + LRE
Sbjct: 178 DSKAEDEGSEIEDKLGRGERPIVCVKGGRISDYNGKSISVTGGSTLLVDPELEDVSRLRE 237
Query: 447 W----FDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITF 502
W +D+ T S S+ + +G K VS++ + L SE V +
Sbjct: 238 WMVASYDTTSFVHVTNSSSKAVISG------TKAVSEMLSINLKVSEFSAIFRVIVSVKE 291
Query: 503 IKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGL 561
I++ F Y AC ++ RQC KKVTQ S + WQC+ C+ + + +Y L I D TG
Sbjct: 292 IQTGDFYYPACMKVVNGRQCGKKVTQVSESMWQCNSCDSDSGDIQLKYALHLCILDSTGH 351
Query: 562 TWVTAFQESGEEILGCPAKELYMLKYELQDDVRFG-----EIIRSRVFNQYLFRLKIKEE 616
W AF ++ EI+G PA +L LQDD G + IRS+++N +++ K E
Sbjct: 352 IWAVAFDDAANEIVGMPACKL----AALQDDDYTGFSAIMDSIRSKMYN---LKVRCKLE 404
Query: 617 LYGDEQRVKITVIRAD 632
Y D +++K ++ D
Sbjct: 405 SYRDTEKLKFFIVGLD 420
>gi|403221677|dbj|BAM39809.1| replication factor-A protein 1 [Theileria orientalis strain
Shintoku]
Length = 659
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 148/469 (31%), Positives = 237/469 (50%), Gaps = 49/469 (10%)
Query: 176 VRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRR 235
VRS + T+ PY+PP N + K E P I+ L Y +W I+ARV K D+R+
Sbjct: 162 VRSVK-TISNPYEPPKNVKK-----KLEIPP--TKISDLTLYTPKWLIRARVAYKSDIRK 213
Query: 236 YNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFN 295
+NN RG+ ++FS DL DS+G EIR T F V+++Y +E G+VY IS G LKPA K FN
Sbjct: 214 FNNQRGESQLFSVDLCDSNG-EIRATFFGESVNKWYTFLEEGQVYSISGGQLKPANKKFN 272
Query: 296 HLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPS 355
L++ E+ L+ + L + DD+IP FSF + +I++ + +DVIG+V++
Sbjct: 273 SLRHSCELVLDEHCHIQLF-QNDDTIPSFCFSFTPLDQIQNLKVGEQIDVIGVVVTAKDL 331
Query: 356 VPI-LRKNGMETQRRILNLKDTSGRSVELTLWG----DFCNKEGQKLQEMVDVGFFPVLS 410
+ ++ G ++R + D++ S+ LT WG +F N EG P++
Sbjct: 332 QTVQVKSTGKALEKRDFLICDSTKSSIWLTSWGPKIRNF-NYEGPDSH--------PLVC 382
Query: 411 VKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAK 470
+K KV ++ GK + + STQ+ P EA ELR+W++ +N+ T++ E + G +
Sbjct: 383 LKGVKVIEWQGKKLDVMGSTQVIFEPVIQEALELRKWWN---ENSHTLNFGTETSRGSSS 439
Query: 471 NEIHKTVS-----QIKNEGLG-RSEKPDWV--TVRAFITFIKSDSFCYTACPLMIGDRQC 522
++ S N+ L +S + + T RA I +K +F + +CP C
Sbjct: 440 KVFNQMSSLAEIISATNQALQFKSIDSNGMIFTTRALIEVLKDGTFSWPSCP------GC 493
Query: 523 NKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEE---ILGCPA 579
K++ + + W C RC + Y+L +I D+T WVTA + GE+ I+G A
Sbjct: 494 RKRM-NNDDGWYCPRCENR-GTPTHMYMLTLKIVDETSHMWVTAMTDVGEDVQSIMGTKA 551
Query: 580 KELYMLKYELQDD---VRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVK 625
L L D F +Y+F++K E + DE R+K
Sbjct: 552 YNLVKLMENGGTDETGKNFANYFEEVRLTEYVFKIKATVENFMDEPRLK 600
>gi|237839391|ref|XP_002368993.1| hypothetical protein TGME49_036080 [Toxoplasma gondii ME49]
gi|211966657|gb|EEB01853.1| hypothetical protein TGME49_036080 [Toxoplasma gondii ME49]
gi|221483366|gb|EEE21685.1| replication factor, putative [Toxoplasma gondii GT1]
Length = 458
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 236/464 (50%), Gaps = 39/464 (8%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
IP+ L Y +W I+ARV KGD+R+YN ARG G++F+ +L D DG EIR T FNA V
Sbjct: 6 FIPLKDLTAYVAKWTIRARVDVKGDIRKYNGARGPGQLFNVELKDKDG-EIRATFFNAAV 64
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI-FLEATSTVDLCTEEDDSIPK-QQ 325
D++Y I++ G+VY GS+KP FNH ++++E+ F E +S V+ E IP +
Sbjct: 65 DKWYNILQEGKVYYFRGGSVKPKNPRFNHTRHDYELTFDEKSSIVE--AESGADIPSISR 122
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELT 384
I IE E NS V +I IV P I ++ G + +R + L D GRS+ LT
Sbjct: 123 ADLVDIRGIEEKEVNSTVSLIAIVHDYRPIQSITIKSTGQQKPKRDVFLVDEGGRSLVLT 182
Query: 385 LWGDFCNK--EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAH 442
LWG+ E Q Q+ P++ +KS KV D++G+ + + +T++ + PD A
Sbjct: 183 LWGEKTETLPEEQLCQK-------PLVLLKSVKVGDWNGRKLDSQGNTRVELFPDGNRAA 235
Query: 443 ELREWFDSGGKNAATVSISREIAAGG---AKNEIHKTVSQIKNEGLGR-----SEKPDWV 494
E+++W++ G + + ++ GG + EI K++ Q+ E S+K +
Sbjct: 236 EVQDWWNQEGSRRGSFA---SLSGGGLAVGRKEILKSLEQVAQEAAQAEAAVLSDKGVYA 292
Query: 495 TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNR-WQCDRCNQEIDECDYRYLLQA 553
T A + I D F + ACP C KK+ + R WQC C ++ ++ ++ Y+L
Sbjct: 293 TSCALLERIGDDRFSWPACP------DCRKKMNEEMPRCWQCPSCRKQCEQPNHTYMLNL 346
Query: 554 QIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYE---LQDDVR-FGEIIRSRVFNQYLF 609
+ D TG + E EE + E +L E L + R F +I +++F
Sbjct: 347 SLMDLTGSLRCSCIGEKAEEFMANTKAETVLLLAEHRALDEQGRSFQDIFADANLEEWIF 406
Query: 610 RLKIKEELYGDEQRVKITVIRADQV--NYSSESRYLLDLISKSF 651
R+ K + + DE +K V+ A + ++++ LD + +F
Sbjct: 407 RICSKYDSWMDEVSIKQRVVAAAPLFRRVGEQTQHRLDFVRTAF 450
>gi|68077039|ref|XP_680439.1| replication factor a protein [Plasmodium berghei strain ANKA]
gi|56501369|emb|CAI04746.1| replication factor a protein, putative [Plasmodium berghei]
Length = 1169
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 142/449 (31%), Positives = 233/449 (51%), Gaps = 38/449 (8%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
++PI L+ Y +W IKARV +K ++R++ +GKVF+ +L D + GEI+V F V
Sbjct: 707 LMPINKLSQYSTKWIIKARVQSKDNIRKFYTGNKEGKVFNIELCD-ESGEIKVNVFGKAV 765
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D++Y+ +EVG++Y ISKG++K A K FN LK++ EI L+ S ++L E D +IPK ++
Sbjct: 766 DKWYDYLEVGKIYKISKGNIKSANKKFNTLKHDCEITLDENSILELLEENDMNIPKYIYN 825
Query: 328 FRHISEIESAENN-SIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTL 385
F I+EI++ N ++VDVIG+V+S IL +K G +++ L L D + ++ +TL
Sbjct: 826 FYPINEIKANLNTGTLVDVIGVVLSFQELNQILIKKTGQYKEKKDLMLIDETNETINVTL 885
Query: 386 WGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELR 445
WG+ K++EM ++ ++ K KV ++ GK + + P T++ INP+ +A+ L+
Sbjct: 886 WGE----NAVKMEEM-NITENCIICFKCLKVGEWQGKKLESHPKTKVEINPELDKAYTLK 940
Query: 446 EWFDSGGKNAATVSISREIAAGGA--KNEIHKTVSQI-KNEGLGRSE----KPDWVTVRA 498
W+ + KN + E KT+ +I KN L E K T
Sbjct: 941 NWWINNKKNVYNTINLTTTTSNNNMLNLESQKTIQEIKKNVNLANEEVLSGKGIIFTTFG 1000
Query: 499 FITFIKSDSFCYTACPLMIGDRQCNKK----VTQSGNR---------WQCDRCNQEIDEC 545
FI I + Y+ACP CNKK V + G C +CN+
Sbjct: 1001 FIDHIYNAIPVYSACP------NCNKKMVATVIEDGEEDMDQNVSESMYCAKCNKNNIPV 1054
Query: 546 DYRYLLQAQIQDQTGLTWVTAFQESGEEIL-GCPAKELYMLKYEL--QDDVRFGEIIRSR 602
Y Y + +I D T V+AF S + I+ G A+E L+ E Q+++ ++I
Sbjct: 1055 -YNYSINLKITDNTDSLRVSAFANSAKTIMNGLSAEEFMKLRQEYISQENIENFDLIEKA 1113
Query: 603 VFNQYLFRLKIKEELYGDEQRVKITVIRA 631
N++ FR+K + DE + T++
Sbjct: 1114 KLNEFFFRIKAYMTSHMDEIKKNYTILET 1142
>gi|320168096|gb|EFW44995.1| replication protein A [Capsaspora owczarzaki ATCC 30864]
Length = 688
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 185/683 (27%), Positives = 303/683 (44%), Gaps = 80/683 (11%)
Query: 21 KPLVQVMDIKLIGSTQ----ERYRFLISDSVST-QHAMLATQLNDRVKTGQVKKGSVVQL 75
+P++Q++ IK + S +R+R +ISD V A+L T L + KT + + +VV++
Sbjct: 26 QPVLQILSIKKLTSNGTTPGDRHRVVISDGVHHYMQALLGTSLAEVAKTDAITRFTVVRV 85
Query: 76 IDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNY 135
++CS V R I+++++++ + IG+PK + + P
Sbjct: 86 KKFVCSPVVERTIVILMDVDILGTPAGKIGDPKPY--------EVAPDAGAVAGGAAAGA 137
Query: 136 SAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRN 195
+G N + + S T A G++ +F V P + +F
Sbjct: 138 PTSPAGATNGAAAPVGAAPAAPKVSPYRQYTDAA--TGAVTSAFGARVASPPRAQQSFPA 195
Query: 196 HGP------ILKNEAPARIIPIAAL-NPYQGRWAIKARVTAKGDLRRY-------NNARG 241
P I+ +PIA + N ++ I+ARVT K +R + NN G
Sbjct: 196 FDPNKTLEQIVAEGQTPETLPIAYIYNTMPSKFIIRARVTLKHPVREFARKNPGPNNQSG 255
Query: 242 DGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEW 301
G+V S DL D D EIR T FN +D +EVG+ Y SK S+KPA + +N L +++
Sbjct: 256 -GRVCSIDLKD-DSSEIRATAFNEQIDTIINSLEVGKAYYFSKMSVKPANRMYNTLPSDY 313
Query: 302 EIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK 361
E+ E + C +E + +P+ ++F +E+ + VD+IGI S I K
Sbjct: 314 ELTFEKGTQWVPCHDEAN-LPQVVYNFVRFDGLETLGEQT-VDLIGICKSARDVQTITTK 371
Query: 362 NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG 421
+R L L D S R + +TLW N + E V V VL+ + K+ DFSG
Sbjct: 372 QQKSVPKRELTLVDQSQREITVTLW----NTQATNFDEQVAVDNR-VLAFRKVKLTDFSG 426
Query: 422 -KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQI 480
KS I S+ + + PD E ELR WFDS G+N + ++ A N T QI
Sbjct: 427 VKSASCISSSAMEVEPDMPETQELRAWFDSEGRNQSFQQVTGGAGAYSGGNRDLATFQQI 486
Query: 481 -KNEGLGRSEKPDWVTVRAFITFIK------------SDSFCYTAC-----PLMIG---- 518
N LG ++K ++ ++ +TF+K S Y AC P+ G
Sbjct: 487 NSNHSLG-ADKAEYARLQGTVTFLKTKFDDKSGSNDGSVGMYYYACGNIKQPIDNGQAAA 545
Query: 519 --DRQ-------CNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQE 569
RQ C KK+ C +Q I C+ ++ D TG W+TAF++
Sbjct: 546 PNSRQQAQQPSVCGKKLAIGEQCPTCGDVSQRISGCNLTFV----ADDSTGSQWITAFRD 601
Query: 570 SGEEILGCPAKELYMLK-YELQ---DDVRFGEIIRSRVFNQYLFRLKIKEELYGD-EQRV 624
+ + ILG K+L + +EL + + I + + Y L+IK+E R
Sbjct: 602 TAQTILGASNKDLTLEHLHELALNGEQEQLDSIYAQALHHPYEMTLRIKQEQSQQGGMRT 661
Query: 625 KITVIRADQVNYSSESRYLLDLI 647
+ ++R ++++ +S L+ LI
Sbjct: 662 RYQLVRLAPIDFARDSLRLVRLI 684
>gi|389582205|dbj|GAB64760.1| replication factor a protein [Plasmodium cynomolgi strain B]
Length = 1187
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 140/447 (31%), Positives = 226/447 (50%), Gaps = 43/447 (9%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
++ I L+ Y +W IKARV +K ++RR+ + +GKVF+ +L D DG EI+ F V
Sbjct: 732 LMQINKLSQYSSKWIIKARVQSKDNVRRFYSGNKEGKVFNIELCDEDG-EIKANFFGKAV 790
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D++Y+ ++VG++Y ISKG++K A K FN LK++ EI L+ S ++L EE+D+IPK ++
Sbjct: 791 DKWYDYLQVGKIYKISKGNVKAANKKFNTLKHDCEITLDENSIIELL-EENDNIPKFIYN 849
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTLW 386
F I I++ S+VDVIG+V S ++ IL +K G ++R L L D S ++ +TLW
Sbjct: 850 FASIDTIKNMNTGSLVDVIGVVFSFQETMQILIKKTGQYKEKRDLILIDDSNETINVTLW 909
Query: 387 GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELRE 446
G+ K E V + ++ K KV ++ GK + + P T++ +NP+ H L+
Sbjct: 910 GEHALK-----IEEVHLRDNSIICFKYLKVGEWQGKKLESHPKTKIDVNPEIERTHVLQT 964
Query: 447 WFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIK------NEGLGRSEKPDWVTVRAFI 500
W+ S +N + S + E+ KT+ +IK NE S K T FI
Sbjct: 965 WWSSNKQNLYS---SVNVNTNSFHIELQKTIEEIKKDVNLANED-ALSGKGIVFTTFGFI 1020
Query: 501 TFIKSDSFCYTACPLMIGDRQCNKKVTQS---------------GNRWQCDRCNQEIDEC 545
I + Y+ACP CNKK+ + C +CN+ +
Sbjct: 1021 DHIYNSIPVYSACP------DCNKKMITNVVEEEEDDINSSQMMDQSMYCAKCNKN-NTP 1073
Query: 546 DYRYLLQAQIQDQTGLTWVTAFQESGEEIL-GCPAKELYMLK--YELQDDVRFGEIIRSR 602
Y Y + +I D T +AF I+ G A E L+ Y Q+++ ++I
Sbjct: 1074 IYNYSINLKITDSTDSLRASAFAGCARTIMNGLSADEFMALRQEYVTQENIENFDLIEKV 1133
Query: 603 VFNQYLFRLKIKEELYGDEQRVKITVI 629
N++ FR+K + DE + T+I
Sbjct: 1134 KLNEFFFRIKAYMTSHMDELKKNYTII 1160
>gi|399216333|emb|CCF73021.1| unnamed protein product [Babesia microti strain RI]
Length = 676
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 225/438 (51%), Gaps = 36/438 (8%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
I+ L+ Y +W I AR+ K D+R++N RG+ ++FS DL DS EI+ T F V+++
Sbjct: 234 ISELSLYTPKWTILARIMLKSDIRKFNTPRGESQLFSLDLCDS-TSEIKATLFGDAVNKW 292
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRH 330
+E E G+VY ISKG ++ A K FNHL + EI L+ + V ++D+SIP FSF
Sbjct: 293 FEFFEEGKVYSISKGQIRAANKKFNHLNHPCEIILDEHAIVQ-NVDDDNSIPSSVFSFTK 351
Query: 331 ISEIESAENNSIVDVIGIVISVNPSVPILRKN--GMETQRRILNLKDTSGRSVELTLWGD 388
+S I+ + S++DVIG+V + ++ L+K G ++R + + D SG S+ +TLW D
Sbjct: 352 LSNIDILDQGSLIDVIGVVCQ-HKNIQSLQKKSLGGVIEKRDIKIVDDSGSSIWVTLWHD 410
Query: 389 FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWF 448
K ++D P++++K+ K+ D+ + + ST++ INP + L +W+
Sbjct: 411 ---KATSLTDSLLDTN--PIIALKNAKITDWQMRKLDVQSSTKVVINPQHPQTDLLCKWW 465
Query: 449 ----DSGGKNAATVSISREIAAGGAKNEIH------KTVSQIKNEGLGRSEKPDWVTVRA 498
KN T +I ++ GG + E+ K +QI + +S+ VR
Sbjct: 466 IEVTQFLTKNGKT-TIFNSVSIGGLEEEVESIDYLTKQATQIGQDANSQSKT---FNVRG 521
Query: 499 FITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNR---WQCDRCNQEIDECDYRYLLQAQI 555
I +K + + + ACP C KK+ Q W+C RCN E ++ Y+L +I
Sbjct: 522 VIEILKENIYSWPACP------GCRKKMLQEQPESPIWRCTRCNME-GSPNHTYMLNFKI 574
Query: 556 QDQTGLT-WVTAFQESGEEIL-GCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKI 613
D T + W +A GEEI+ G A+EL + + +++F++++
Sbjct: 575 VDTTQTSIWASAMGNVGEEIMGGVKAEELLAIASSEFNGKNLSNYFEDARLTEHIFKVRV 634
Query: 614 KEELYGDEQRVKITVIRA 631
+ + + E R+K V++
Sbjct: 635 QMDSFLGEFRIKYRVVKV 652
>gi|156094579|ref|XP_001613326.1| replication factor a protein [Plasmodium vivax Sal-1]
gi|148802200|gb|EDL43599.1| replication factor a protein, putative [Plasmodium vivax]
Length = 1141
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 141/447 (31%), Positives = 223/447 (49%), Gaps = 43/447 (9%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
++ I L+ Y +W IKARV +K ++RR+ + +GKVF+ +L D DG EI+ F V
Sbjct: 686 LMQINKLSQYSSKWIIKARVQSKDNVRRFYSGNKEGKVFNIELCDEDG-EIKANFFGKAV 744
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
DR+Y+ ++VGR+Y ISKG++K A K FN LK++ EI L+ S ++L EE+D+IPK ++
Sbjct: 745 DRWYDYLQVGRIYKISKGNIKAANKKFNTLKHDCEITLDENSIIELL-EENDNIPKFIYN 803
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTLW 386
F I I++ S+VDVIG+V S ++ IL +K G ++R L L D S ++ +TLW
Sbjct: 804 FASIDTIKNMNTGSLVDVIGVVFSFQETMQILIKKTGQYKEKRDLILIDDSNETINVTLW 863
Query: 387 GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELRE 446
G+ K + + F L KV ++ GK + + P T++ +NP+ A+ L+
Sbjct: 864 GEHALKVEEDCLRDNSIICFKYL-----KVGEWQGKKLESHPKTKIDVNPEIDRAYVLQT 918
Query: 447 WFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIK------NEGLGRSEKPDWVTVRAFI 500
W+ S N + S + E+ KT+ +IK NE S K T FI
Sbjct: 919 WWSS---NKQNLYHSVNVNTSSFHIELQKTIEEIKKDVNLANED-ALSGKGIVFTTFGFI 974
Query: 501 TFIKSDSFCYTACPLMIGDRQCNKKVTQS---------------GNRWQCDRCNQEIDEC 545
I + Y+ACP CNKK+ + C +CN+
Sbjct: 975 DHIYNSIPVYSACP------DCNKKMITNVVEEEEDDISSSQMMDQSMYCAKCNKNNTPV 1028
Query: 546 DYRYLLQAQIQDQTGLTWVTAFQESGEEIL-GCPAKELYMLK--YELQDDVRFGEIIRSR 602
Y Y + +I D T +AF I+ G A E L+ Y Q+++ ++I
Sbjct: 1029 -YNYSINLKITDSTDSLRASAFAGCARTIMNGLSADEFMALRQEYVTQENIENFDLIEKA 1087
Query: 603 VFNQYLFRLKIKEELYGDEQRVKITVI 629
N++ FR+K + DE + T+I
Sbjct: 1088 KLNEFFFRIKAYMTSHMDELKKNYTII 1114
>gi|221052666|ref|XP_002261056.1| replication factor a related protein [Plasmodium knowlesi strain H]
gi|194247060|emb|CAQ38244.1| replication factor a related protein [Plasmodium knowlesi strain H]
Length = 1191
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 140/448 (31%), Positives = 227/448 (50%), Gaps = 45/448 (10%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
++ I L+ Y +W IKARV K +R+Y + +GKVF+ +L D DG EI+V F V
Sbjct: 713 LMHINKLSQYSSKWIIKARVQFKDVVRKYYSGNKEGKVFNIELCDEDG-EIKVNFFGKAV 771
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D++Y+ +++G++Y ISKG +K A K F +K+++EI L+ S ++ EE+D+IPK ++
Sbjct: 772 DKWYDYLQLGKIYKISKGYIKAANKKFTTIKHDYEITLDENSIIE-ALEENDNIPKFIYN 830
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTLW 386
F I I++ + S+VDVIG+V S S IL +K G ++R + L D S ++ +TLW
Sbjct: 831 FTSIENIKNLKVGSLVDVIGVVFSYQESTQILIKKTGQYKEKRDIILIDDSKETINVTLW 890
Query: 387 GDFC-NKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELR 445
GD N E L++ ++ K+ KV ++ G + + P T++ INP+ A L+
Sbjct: 891 GDHALNIEEGYLKDNS------IICFKNLKVGEWQGIKLESHPKTKIDINPEIDRAQMLQ 944
Query: 446 EWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIK------NEGLGRSEKPDWVTVRAF 499
W+ + +N + S I +G E+ KT+ +IK NE S K T F
Sbjct: 945 TWWRNNKQNLYS---SVNIGSGIFHMELQKTIEEIKKDVNLANED-ALSGKGIIFTTFGF 1000
Query: 500 ITFIKSDSFCYTACPLMIGDRQCNKKVTQS---------------GNRWQCDRCNQEIDE 544
I I + Y+ACP CNKK+ + C +CN+ +
Sbjct: 1001 IDHIYNSMPVYSACP------DCNKKMISNVVEEEEDDMNSPQMMDQSMYCSKCNKN-NT 1053
Query: 545 CDYRYLLQAQIQDQTGLTWVTAFQESGEEIL-GCPAKELYMLK--YELQDDVRFGEIIRS 601
Y Y + +I D T TAF I+ G A E L+ Y Q+++ ++I
Sbjct: 1054 PTYSYFINLKITDSTDSLRATAFAGCARTIMNGLSANEFMALRQEYVTQENIENFDLIEK 1113
Query: 602 RVFNQYLFRLKIKEELYGDEQRVKITVI 629
N++ FR+K + DE + K T++
Sbjct: 1114 AKLNEFFFRIKAYMTSHMDELKKKYTIV 1141
>gi|403361002|gb|EJY80197.1| Replication factor-A protein [Oxytricha trifallax]
Length = 701
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 155/642 (24%), Positives = 295/642 (45%), Gaps = 62/642 (9%)
Query: 38 RYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICST-VQNRKIIVVLNMET 96
+ R +SD ST AM+ +++ ++ + + + S++++ + T + RK++V +
Sbjct: 79 KQRIHLSDGTSTVIAMITEKMDKQMNSIAIPRYSILKMTGNMLQTQINERKVLVFKEIPE 138
Query: 97 IILD--CEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQ 154
I+ + +G P+ + +K + + Q + ++ T N+ ++ +
Sbjct: 139 ILYTGLTKAVGKPREY-------EKNMQDTDYFQNIDID-------LTINVNDTIEYQKI 184
Query: 155 NPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGP-ILKNEAPARIIPIAA 213
+ S S P + S S Q P F IL + PI +
Sbjct: 185 HAKDSSAAKSTVSTIP-SNSNQNSAQKVESPIVDKADIFNKRAKEILNMSGDIQYTPIKS 243
Query: 214 LNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEI 273
LN + W IKARVT K DL+ + NA+ +G V + +L+D+ G I T +N ++ E+
Sbjct: 244 LNAFLFDWKIKARVTKKCDLKTWKNAKSEGHVMNVELIDNLGTLILATFYNDAALKYNEM 303
Query: 274 IEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISE 333
++ VYL+S GS+K A K F +KN++ I + +S + E+D +I +Q F+F I E
Sbjct: 304 LQENHVYLMSNGSVKIANKKFTSIKNDYCIVFDKSSDIKEV-EDDSNIQQQGFNFVTIDE 362
Query: 334 IESAENNSIVDVIGIVISVNPSVPILRKNGMETQ-RRILNLKDTSGRSVELTLWGDFCNK 392
I E + VD +G++ V KNG + +R L + D SG ++ +TLWG +K
Sbjct: 363 INDFEQSRTVDTVGVITQVGQLSSFQPKNGGAAKDKRSLQIADESGLAISMTLWGQNASK 422
Query: 393 EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGT-IPSTQLFINPDFAEAHELREWFDSG 451
++ VL+++ KV+D+ GK++ + +Q+FI+ D EL++W +
Sbjct: 423 --------LEFKEGSVLAIRGAKVSDYGGKTLNSGHEHSQIFIDVDHKRTRELKQWNANR 474
Query: 452 GKNAATVSISREIAAGGAKNE-------IHKTVSQIKNEGLGR---------SEKPDWVT 495
++ + A G ++E I + V + EG K +
Sbjct: 475 NQDGLNSVSTIGGAQGNQQSEKLDNFRLISEVVKNVSEEGASHQPTYNSMYAQPKAKFFK 534
Query: 496 VRAFITFIKSDS-FCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQ 554
+ F++ +SD + Y +CP C +KV ++C+ CN+ Y++ +
Sbjct: 535 ISGFVSHARSDDKYYYLSCP------DCRRKVVDELEGFRCENCNKSFSRSFPTYIMTVK 588
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRV-FNQYLFRLKI 613
QD TG ++ +E G++I+G A+E K +L++ + ++ + + +K
Sbjct: 589 FQDATGDMYIQFARELGDQIMGMTAEEFKDAKEQLENPEEMKLFLSQQILYKAHSVVIKA 648
Query: 614 KEELY-------GDEQRVKITVIRADQVNYSSESRYLLDLIS 648
+ + Y GD QR+K T I+ +++ E+ LL +S
Sbjct: 649 QNDQYRSSTMMEGD-QRIKYTAIKVAPISFKEENNMLLKRLS 689
>gi|17533299|ref|NP_495606.1| Protein RPA-1 [Caenorhabditis elegans]
gi|2833300|sp|Q19537.1|RFA1_CAEEL RecName: Full=Probable replication factor A 73 kDa subunit;
AltName: Full=RP-A p73; AltName: Full=Replication factor
A protein 1; Short=RF-A protein 1
gi|351018137|emb|CCD62042.1| Protein RPA-1 [Caenorhabditis elegans]
Length = 655
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 168/624 (26%), Positives = 285/624 (45%), Gaps = 59/624 (9%)
Query: 39 YRFLISDSVSTQHAMLATQLNDRVK--TGQVKKGSVVQLIDY-ICSTVQNRKIIVVLNME 95
+R ISD V +A+++ ++D++K + +G+++ L + I + K
Sbjct: 62 FRIRISDGVFQYNALMSADIDDQIKREVEHLVEGTIIALTKFEIYDQGEGAK-------- 113
Query: 96 TIILDCEPIGNPKIFSESE--LTAQKTIPSNNLPQPVRVNNYSAPN-------SGTFNLQ 146
+C I KI S LT+ + P ++ +P Y PN +
Sbjct: 114 ----NCFLIKGYKILSRYHQVLTSPEVKPRSHSGKPDEHKGYR-PNIIIEDVWPEAEGMA 168
Query: 147 NSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQP-TVQPPYQPPPNFRNHGPILKNEAP 205
N NP + P S R+ P + PPP R +
Sbjct: 169 ADYQENMANPPAAKAPKR---EFGEEASYNRAAAPEATRARAVPPPARRTASNTERG--- 222
Query: 206 ARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
++PIA + PY + I V+ K ++R + + KVF+F++ DS+G IR T FN
Sbjct: 223 --VMPIAMVTPYVSNFKIHGMVSRKEEIRTF--PAKNTKVFNFEITDSNGDTIRCTAFNE 278
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQ 325
V + Y I Y +S GS+K A K FN+ +++EI L + S ++ E + PK
Sbjct: 279 VAESLYTTITENLSYYLSGGSVKQANKKFNNTGHDYEITLRSDSIIE-AGGELLAAPKLI 337
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNP-SVPILRKNGMETQRRILNLKDTSGRSVELT 384
+ EI + ++DV+ +V ++P + K G +R + L D SG V LT
Sbjct: 338 LKRVKLGEI-AGYAGQLIDVLVVVEKMDPEATEFTSKAGKSLIKREMELIDESGALVRLT 396
Query: 385 LWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGTIPSTQLFINPDFAEAHE 443
LWGD K +VD V++ K +F+G S+GT +T++ P+ A E
Sbjct: 397 LWGDEATK------ALVDDYVQKVIAFKGVIPREFNGGFSLGTGSATRIISVPEIAGVSE 450
Query: 444 LREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGR-SEKPDWVTVRAFITF 502
L +W+ T + A G NE +T++ ++ G+ S+K D+ TV+A IT
Sbjct: 451 LYDWY---ANVKPTTEVKMMSQAAGGSNEAPRTIAGLQEMQFGKDSDKGDYATVKAMITR 507
Query: 503 IKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLT 562
+ + Y C C KK+ ++C++CN+ +++ + Y++Q ++ D+TG
Sbjct: 508 VNPTNALYRGC----ASEGCQKKLVGENGDYRCEKCNKNMNKFKWLYMMQFELSDETGQV 563
Query: 563 WVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQ 622
+VTAF +S +I+G A EL L E D+ + I F ++RL+ K + Y +E
Sbjct: 564 YVTAFGDSAAKIVGKSAAELGELHDESPDE--YNAIFERLQFVPKMWRLRCKMDSYNEEV 621
Query: 623 RVKITVIRADQVNYSSESRYLLDL 646
R K+TV D VN + +Y+ +L
Sbjct: 622 RQKMTVYGVDDVN---QDKYIENL 642
>gi|307103509|gb|EFN51768.1| hypothetical protein CHLNCDRAFT_59111, partial [Chlorella
variabilis]
Length = 736
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 232/476 (48%), Gaps = 46/476 (9%)
Query: 181 PTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAR 240
P + P P P G + + + PI+ALNPY WAIKA+V +KG R ++
Sbjct: 137 PCITPASHPTPPSAGWGQKMGSATKRPLQPISALNPYNNNWAIKAKVVSKGSKRSFSR-- 194
Query: 241 GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNE 300
G VFS +++D G I T + D YE++E G+VY+ +G++KPA K ++ ++N+
Sbjct: 195 --GSVFSAEVVDEQGTTIEATFWREAADHAYELLEEGKVYIFGRGNVKPADKRYSRVRND 252
Query: 301 WEIFLEATSTVDLCTEE-DDSIPKQQFSFRHISEIES-AENNSIVDVIGIVISVNPSVPI 358
+ + + S ++ C ++ D S + F I ++ + + +VD++G+V+ V P +
Sbjct: 253 YALHFDTASELESCADDIDTSKMHVKMEFVPIEQLAAFVDKKMMVDIVGVVMDVKPLGSV 312
Query: 359 LRK-NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVN 417
RK + +E RR + L D S ++V LT+WG+ G++++E+V PV+++ +
Sbjct: 313 KRKTDQVELSRRDITLVDQSLKTVVLTMWGNAAEAAGREIEELVQQA--PVVAITA---- 366
Query: 418 DFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIA-----AGGAKNE 472
+ ++ + + INPD EA LR+W+DS G+ AA + +A +G + +
Sbjct: 367 -----CLSSLQRSAVLINPDVPEAVALRQWYDSSGRGAAMSHVGEGLATALKHSGSSAGQ 421
Query: 473 IHKTVSQIKNEGLGRSE-KPDWVTVRAFITFIKSD-SFCYTA---------------CPL 515
++ + ++ KP + TV A + D + Y A CP
Sbjct: 422 ERASLELFRAAAPATTQDKPHYSTVTATFAMVNPDQALFYMANPENNRKASTTAPRLCPG 481
Query: 516 MIG--DRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEE 573
+G C V Q ++ C+ + RY+ A++ D +G V F E E+
Sbjct: 482 FMGLLCALCVLVVEQGPGQYFCEYDGTTLSSMVRRYIFNAKVMDVSGECSVQVFNEQAEQ 541
Query: 574 ILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVI 629
+L A EL L+ D +F E+++S ++ + RLK + + + E+ V+I I
Sbjct: 542 LLEMKADELAELRE--TDAKQFQEVLKSVLWKDNVLRLKAQAQCF--EEDVEIGFI 593
>gi|154288368|ref|XP_001544979.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408620|gb|EDN04161.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 549
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/443 (30%), Positives = 217/443 (48%), Gaps = 68/443 (15%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I PI AL+PY +W IKAR T K ++ ++N G+GK+FS +LLD D GEIR T F
Sbjct: 168 IYPIEALSPYSHKWTIKARCTNKSAIKTWHNKNGEGKLFSVNLLD-DSGEIRATAFKDQC 226
Query: 268 DRFYEIIEVGRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQF 326
D Y + E G VY IS ++ A+K FN+L NE+E+ E + V+ E++D +P+ +F
Sbjct: 227 DSLYSVFEEGCVYYISSPCRVQMAKKAFNNLNNEYELTFEKDTVVEKAEEQND-VPQIRF 285
Query: 327 SFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILNLKDTSGRSVELTL 385
+F +I+ ++S E + +DVIG++ V IL K + +R L L D +G SV LT+
Sbjct: 286 NFTNIANLQSVEAGTTIDVIGVLKDVGELSQILSKTTSKPYDKRDLTLVDNTGYSVRLTV 345
Query: 386 WGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELR 445
WG+ KE + E V++ K KV+DF+G+S+ + S + ++ D +AH+L+
Sbjct: 346 WGNIA-KEFDSVPE-------SVVAFKGVKVSDFNGRSLSLLSSGSMTVDLDIEDAHKLK 397
Query: 446 EWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKS 505
G + + ++ +K V Q +N
Sbjct: 398 ------GCHCGLCQADTMAYSACLTDKCNKKVLQDEN----------------------- 428
Query: 506 DSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVT 565
G +C +RC+Q +YRY+L + D TG W++
Sbjct: 429 ------------GQWRC-------------ERCDQSFPHPEYRYILSVNVCDHTGALWLS 463
Query: 566 AFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVK 625
F E G+ ILG A EL LK D+ + E+++ + F + K + + D+QRV+
Sbjct: 464 CFDEVGKIILGTSANELMELKE--NDERAYEELVQRANCRSWNFNCRAKMDNFQDQQRVR 521
Query: 626 ITVIRADQVNYSSESRYLLDLIS 648
V ++YS ES L +LI+
Sbjct: 522 YQVSSVSAIDYSVESTRLAELIN 544
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 66/112 (58%), Gaps = 10/112 (8%)
Query: 20 SKPLVQVMDIKLIG---STQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLI 76
++P+VQ + +K + ++ ER+R + SD + MLATQ N V +GQ+ +G V+L
Sbjct: 25 AEPVVQCVQVKPLPPQPNSPERFRAVFSDITNYVQTMLATQANHYVTSGQLVRGCFVRLK 84
Query: 77 DYICSTVQNRKIIVVLNMETIILD----CE-PIGNPKIFSESELTAQKTIPS 123
+ + V+ ++I+++L++E +LD CE IG+P+ + KTIP+
Sbjct: 85 SFQANMVKGKRILIILDLE--VLDRLGICEKKIGDPQPLDAKQEEQDKTIPT 134
>gi|403340896|gb|EJY69743.1| Replication protein A 70 kDa DNA-binding subunit, putative
[Oxytricha trifallax]
Length = 636
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 224/461 (48%), Gaps = 38/461 (8%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
PI AL+ + W IKARV K + + + N++G+G + + +L+D G +I+ T F +R
Sbjct: 171 PIKALSTFNYDWRIKARVVKKHEKKLWKNSKGEGWIMNIELMDCFGTQIQATFFKDSAER 230
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFR 329
F +II+ G +YL S GS+K A + ++N++ + + + + + +D SI ++ F+F
Sbjct: 231 FDQIIKEGNIYLFSNGSVKLANHKYTQIRNDFTLVFDKNADI-VEVPDDLSIQEKGFNFL 289
Query: 330 HISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDF 389
I +I + E N I+D+IGI+ + P + K G ++R+L L D S ++L LWGD
Sbjct: 290 GIKDIMTVEKNKIIDIIGILHQIGPLQEVQTKAGHNKEKRMLTLADESEMIIQLCLWGDM 349
Query: 390 CNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFD 449
+ M + V+++K GKV D++GK + + ++ +LR W+D
Sbjct: 350 ----AHRFDMMDETCSNHVIAIKGGKVVDYAGKQLNIHEDAYIMLDIPHPRTEQLRAWYD 405
Query: 450 SGGKNAATVSI---SREIAAGGAKNEIHKTVSQI------------KNEGLGRSEKPD-- 492
+ +I A+N+ + V I +G ++ +
Sbjct: 406 NLQNKDVLKNIVVKKERTENNQAQNKQQENVRMIAEVLDYLNQASQDQSKMGFNQNNNGN 465
Query: 493 -----WVTVRAFITFI-KSDSFCYTACPLMIGDRQCNKKVTQSGNR--WQCDRCNQEIDE 544
WV + I+FI K D Y ACP + C KKV + + ++C+ CNQ
Sbjct: 466 VFAYFWVNCQ--ISFIKKDDKLYYLACP----EENCRKKVIEDTDSKTFRCESCNQSFQS 519
Query: 545 CDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVF 604
C Y+L A+I DQ+ +V ++E G +I+ P + + +K E Q++ + +I F
Sbjct: 520 CVPTYMLMARIIDQSDSIFVNFYREQGSQIMSVPPEVIRRIKEEEQEE-QLNDIFIDAQF 578
Query: 605 NQYLFRLKIKEELYG-DEQRVKITVIRADQVNYSSESRYLL 644
Y +K K+ YG D R + Q +Y +E++ +L
Sbjct: 579 KPYQILIKAKQSNYGQDSSRTSFFATKIQQFSYQTENKEIL 619
>gi|403364199|gb|EJY81856.1| Replication protein A 70 kDa DNAbinding subunit puta [Oxytricha
trifallax]
Length = 636
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 224/461 (48%), Gaps = 38/461 (8%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
PI AL+ + W IKARV K + + + N++G+G + + +L+D G +I+ T F +R
Sbjct: 171 PIKALSTFNYDWRIKARVVKKHEKKLWKNSKGEGWIMNIELMDCFGTQIQATFFKDSAER 230
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFR 329
F +II+ G +YL S GS+K A + ++N++ + + + + + +D SI ++ F+F
Sbjct: 231 FDQIIKEGNIYLFSNGSVKLANHKYTQIRNDFTLVFDKNADI-VEVPDDLSIQEKGFNFL 289
Query: 330 HISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDF 389
I +I + E N I+D+IGI+ + P + K G ++R+L L D S ++L LWGD
Sbjct: 290 GIKDIMTVEKNKIIDIIGILHQIGPLQEVQTKAGHNKEKRMLTLADESEMIIQLCLWGDM 349
Query: 390 CNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFD 449
+ M + V+++K GKV D++GK + + ++ +LR W+D
Sbjct: 350 ----AHRFDMMDETCSNHVIAIKGGKVVDYAGKQLNIHEDAYIMLDIPHPRTEQLRAWYD 405
Query: 450 SGGKNAATVSI---SREIAAGGAKNEIHKTVSQI------------KNEGLGRSEKPD-- 492
+ +I A+N+ + V I +G ++ +
Sbjct: 406 NLQNKDVLKNIVVKKERTENNQAQNKQQENVRMIAEVLDYLNQASQDQSKMGFNQNNNGN 465
Query: 493 -----WVTVRAFITFI-KSDSFCYTACPLMIGDRQCNKKVTQSGNR--WQCDRCNQEIDE 544
WV + I+FI K D Y ACP + C KKV + + ++C+ CNQ
Sbjct: 466 VFAYFWVNCQ--ISFIKKDDKLYYLACP----EENCRKKVIEDTDSKTFRCESCNQSFQS 519
Query: 545 CDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVF 604
C Y+L A+I DQ+ +V ++E G +I+ P + + +K E Q++ + +I F
Sbjct: 520 CVPTYMLMARIIDQSDSIFVNFYREQGSQIMSVPPEVIRRIKEEEQEE-QLNDIFIDAQF 578
Query: 605 NQYLFRLKIKEELYG-DEQRVKITVIRADQVNYSSESRYLL 644
Y +K K+ YG D R + Q +Y +E++ +L
Sbjct: 579 KPYQILIKAKQSNYGQDSSRTSFFATKIQQFSYQTENKEIL 619
>gi|124505339|ref|XP_001351411.1| replication factor a protein, putative [Plasmodium falciparum 3D7]
gi|6562734|emb|CAB62873.1| replication factor a protein, putative [Plasmodium falciparum 3D7]
Length = 1145
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/445 (30%), Positives = 229/445 (51%), Gaps = 38/445 (8%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
++ I L+ Y +W IKARV +K ++RRY + +GKVF+ +L D DG EI+ F V
Sbjct: 683 LMQINKLSQYSSKWIIKARVQSKDNIRRYTSGSKEGKVFNIELCDEDG-EIKANFFGKAV 741
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D++++ IEVG++Y ISKG +K A K FN L +++EI L+ S +++ EE+++IPK ++
Sbjct: 742 DKWFDFIEVGKIYKISKGMIKVANKKFNTLNHDYEITLDENSLIEILDEENENIPKYNYN 801
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELTLW 386
F I I++ S VD+I +V++ + I ++K G +R + L D S ++++TLW
Sbjct: 802 FISIDNIKNMNTGSFVDIIAVVLNYQEKMQIFVKKTGQYKDKRDVTLIDESFDTIQVTLW 861
Query: 387 GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAE-AHELR 445
K + EM ++ ++ K K+ ++ GK + + T++ INPD E A+ L+
Sbjct: 862 E----KNATIIDEM-NLRDNCIVCFKYLKIGEWQGKKLESHARTKIEINPDNIEKAYILK 916
Query: 446 EWFDSGGK---NAATVSISR-EIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFIT 501
W+ K N+ +S + I EI K V+ + E L S K T FI
Sbjct: 917 NWWIHNKKMICNSINLSSNYINIETQKTIQEIKKNVNLVNEEAL--SGKGIMFTTYGFID 974
Query: 502 FIKSDSFCYTACPLMIGDRQCNKKVTQSG---NRWQ-----------CDRCNQEIDECDY 547
I ++ Y+ACP CNKK+ + N ++ C +CN+ Y
Sbjct: 975 QIYNNMPVYSACP------DCNKKMISNSVDDNEYEPSSNLLEETMYCAKCNKNNIPV-Y 1027
Query: 548 RYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYM---LKYELQDDVRFGEIIRSRVF 604
Y + +I D T +AF + I+ + E YM +Y +Q+++ +II
Sbjct: 1028 NYYINLKITDSTDSIRASAFANCAKIIMNGLSAEEYMKLRQEYIMQENIENFDIIEKIKL 1087
Query: 605 NQYLFRLKIKEELYGDEQRVKITVI 629
N++ FR+K+ + DE + T+I
Sbjct: 1088 NEFFFRIKVYMTSHMDELKKNYTII 1112
>gi|308502550|ref|XP_003113459.1| CRE-RPA-1 protein [Caenorhabditis remanei]
gi|308263418|gb|EFP07371.1| CRE-RPA-1 protein [Caenorhabditis remanei]
Length = 656
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 242/477 (50%), Gaps = 33/477 (6%)
Query: 174 SIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDL 233
S+ R P Q PP P + + IIPIA + PY + I V+ K D+
Sbjct: 193 SVNRMAAPEPQRVRPAPP------PARRGASNTGIIPIAMVTPYVNNFKIHGMVSRKEDI 246
Query: 234 RRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKN 293
R + + +VF+F++ D++G IR FN + F+ +I Y I+ GS++ A K
Sbjct: 247 RTF--PAKNTRVFNFEVTDTNGDTIRCCAFNEAAESFFGMITENLSYYIAGGSVRQANKR 304
Query: 294 FNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVN 353
+N+ +++EI L + S ++ E + PK +SE+ + ++DV+ +V ++
Sbjct: 305 YNNTGHDYEITLRSDSVIE-AGGELLAAPKLNLRRVRLSEV-AGHCGGLIDVLAVVDKMD 362
Query: 354 PS-VPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNK-EGQKLQEMVDVGFFPVLSV 411
+ G +R + L D S V LTLWG+ K + Q+ Q+ V V F V+
Sbjct: 363 DEPTEFTSRAGKTLVKREMELIDESSAMVRLTLWGEEATKADAQEYQQKV-VAFKGVIP- 420
Query: 412 KSGKVNDFSGK-SIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAK 470
+F+G ++GT T++ + PD +L +W+ + +A IS+ G
Sbjct: 421 -----KEFNGGYTLGTGSGTRIILAPDIGGVADLYDWYHNTKPSAEVKMISQ---TSGGS 472
Query: 471 NEIHKTVSQIKNEGLGR-SEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQS 529
N+I +T++ ++ G+ SEK D+ +V+A IT I ++ Y C C KKV ++
Sbjct: 473 NDIPRTIAGLQEMQFGKDSEKGDYASVKAMITRINPNNALYKGC----ASEGCQKKVVET 528
Query: 530 GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYEL 589
++C++CN+ +++ + Y++Q ++ D+TG +VTAF ++ +++G A E+ LK E
Sbjct: 529 DGEYRCEKCNKSMNKFKWLYMMQFELSDETGQVYVTAFGDTAAKVVGKTAAEIGDLKEEN 588
Query: 590 QDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDL 646
++ + + F +++L+ K E Y +E R K+TV D+VN + +Y+ +L
Sbjct: 589 PEE--YNGVFERIQFAPKMWKLRCKMETYNEETRQKMTVFGVDEVN---QDKYIENL 640
>gi|326484265|gb|EGE08275.1| replication factor A 1 [Trichophyton equinum CBS 127.97]
Length = 538
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 114/369 (30%), Positives = 201/369 (54%), Gaps = 20/369 (5%)
Query: 284 KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIV 343
K LK A+K F+++ N++E+ + + V+ +++D +P+ +F+F + ++S + + +
Sbjct: 182 KARLKMAKKEFSNVNNDYELTFDRDTVVEKAEDQND-VPQIRFNFTSLGNLQSIDKGTTI 240
Query: 344 DVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVD 402
DV+GI+ V+ + + K G +R L L D SG SV LT+WG+ D
Sbjct: 241 DVLGILKDVDATSQVTSKTTGKPYDKRELTLVDNSGFSVRLTVWGNTATN--------FD 292
Query: 403 VGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGK-NAATVSIS 461
V++ K KV+DF G+++ + S + ++PD EAH L+ W+D+ GK N+ T S
Sbjct: 293 TPPESVVAFKGVKVSDFGGRTLSLLSSGTVTVDPDIEEAHRLKGWYDAQGKSNSFTAYSS 352
Query: 462 REIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQ 521
GG KT+S+I++E + ++ + +++A + +K D+ CY ACP +
Sbjct: 353 DTTGGGGGSWPTFKTISEIRDEEIPSADSFESFSLKATVIHVK-DNLCYPACP----NEA 407
Query: 522 C-NKKVTQSG-NRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPA 579
C NKKVT+ ++W C+RC + YRY+L D TG W++ F E+G+ I G A
Sbjct: 408 CKNKKVTRGDLDQWHCERCERSYANPKYRYILSLNACDHTGQIWLSCFDEAGQMIFGMTA 467
Query: 580 KELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSE 639
EL +K + DD EI + + + F+ + K + Y ++QR + VI A ++Y++E
Sbjct: 468 DELMKIKED--DDAAANEITKGATYCTWNFKCRAKLDTYQEQQRTRYNVIAATPIDYATE 525
Query: 640 SRYLLDLIS 648
+ L LI+
Sbjct: 526 ADQLSKLIA 534
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 71/232 (30%)
Query: 21 KPLVQVMDIK-LIGSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYI 79
+P++Q + IK ++ Q+RY + SD ML TQLN V G +++GS V+L ++
Sbjct: 23 QPILQCLRIKPVVVREQDRYGVVFSDVNHFVRTMLPTQLNSYVTDGILRRGSFVRLTNFQ 82
Query: 80 CSTVQNRKIIVVLNMETI--ILDCEPIGNPKIF---SESELTAQKTIPSNNLPQPVRVNN 134
S V+ + +++++ +E + + + E IG+PK S E+ Q T S+N
Sbjct: 83 VSVVKGKHLLIIMGLEVLSALGEAERIGDPKPLEPKSGDEMGGQSTTLSSN-------EF 135
Query: 135 YSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFR 194
Y+AP + + PP F+
Sbjct: 136 YNAPQT----------------------------------------------HNPPQQFQ 149
Query: 195 NHGPILKNEAP------ARIIPIAALNPY-QGRWAIKARV-TAKGDLRRYNN 238
N ++ P A I I AL+P+ +W IKAR+ AK + NN
Sbjct: 150 N----IQRSRPSGMTSNANIFSIEALSPFANNKWTIKARLKMAKKEFSNVNN 197
>gi|268530894|ref|XP_002630573.1| C. briggsae CBR-RPA-1 protein [Caenorhabditis briggsae]
gi|74961121|sp|O97472.1|RFA1_CAEBR RecName: Full=Probable replication factor A 73 kDa subunit;
AltName: Full=RP-A p73; AltName: Full=Replication factor
A protein 1; Short=RF-A protein 1
gi|4028997|emb|CAA10310.1| F18A1.5 protein [Caenorhabditis briggsae]
gi|4033360|emb|CAA10466.1| F18A1.5 protein [Caenorhabditis briggsae]
Length = 658
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 143/506 (28%), Positives = 243/506 (48%), Gaps = 45/506 (8%)
Query: 170 PNAGSIVRSFQPTVQ-PPYQPPPNFRNHGPILKNEAPA---------------------- 206
P A SI FQ + PP P + G N PA
Sbjct: 162 PEAESITSEFQENMSNPPAAKMPKRESGGEASHNRVPAPEPHRSRAPPPPARRGPSNTER 221
Query: 207 RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV 266
+IPIA + PY + I V+ K D++ N + K+F+F++ DS+G IR T FN
Sbjct: 222 GVIPIAMVTPYVNNFRIHGMVSRKEDIK--NIPAKNMKIFNFEITDSNGDTIRCTAFNET 279
Query: 267 VDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQF 326
+ F+ I Y +S GS++ A K FN+ +++EI L S V+ E + PK
Sbjct: 280 AESFHSTITENLSYYLSGGSVRQANKKFNNTGHDYEITLRNDSVVE-AGGELLAAPKLNL 338
Query: 327 SFRHISEIESAENNSIVDVIGIVISVNP-SVPILRKNGMETQRRILNLKDTSGRSVELTL 385
++EI + ++DV+ IV ++ + K G +R + L D S V LTL
Sbjct: 339 KRVSLAEI-AGHCGEMIDVLVIVEKMDAEATEFTSKAGKTLTKREMELIDESQALVRLTL 397
Query: 386 WGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGTIPSTQLFINPDFAEAHEL 444
WGD + ++ VD V++ K +F+G S+GT T++ P+ + EL
Sbjct: 398 WGD------EAIKANVDDYHGKVIAFKGVIPREFNGGYSLGTGSGTRIIPVPEISGVSEL 451
Query: 445 REWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGR-SEKPDWVTVRAFITFI 503
+W+ + ++ IS+ G +E +T++ ++ G+ S+K D+ +V+A IT I
Sbjct: 452 YDWYTTEKPHSELKLISQ---TSGGMSEAPRTIAGLQEMQFGKDSDKGDYASVKAMITRI 508
Query: 504 KSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTW 563
+S Y C C KKV +S ++C++CN+ +++ + Y++Q ++ D+TG +
Sbjct: 509 NPNSALYKGC----ASEGCQKKVIESDGEYRCEKCNKSMNKFKWLYMMQFELSDETGQVY 564
Query: 564 VTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQR 623
VTAF +S +++G A+E+ LK E ++ + F ++RL+ K E Y +E R
Sbjct: 565 VTAFGDSAAKVVGKTAQEVGDLKDENLNE--YNATFERLQFVPKMWRLRCKMETYNEEVR 622
Query: 624 VKITVIRADQVNYSSESRYLLDLISK 649
K+TV ++VN L +LI +
Sbjct: 623 QKMTVFSVEEVNQDKYIENLKELIEQ 648
>gi|154413577|ref|XP_001579818.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121914029|gb|EAY18832.1| hypothetical protein TVAG_294830 [Trichomonas vaginalis G3]
Length = 590
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 163/636 (25%), Positives = 287/636 (45%), Gaps = 71/636 (11%)
Query: 21 KPLVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYIC 80
+P+VQV+ IK + YR +SD AML ++L D ++ +++ S+++L+ Y
Sbjct: 20 EPIVQVVQIKECNQ-HDLYRAALSDGTHFIPAMLGSKLKDLIENKVIQRNSLIKLLKYTV 78
Query: 81 STVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNS 140
S +++ ++VLN E IG P L Q I N++P+P ++P
Sbjct: 79 SN-NSKQPLIVLNAELHKEMNSIIGKP-------LALQ--IDRNDIPKPDLSAPMTSPQR 128
Query: 141 GTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPIL 200
GT + NS P S T RS Q T+Q
Sbjct: 129 GTITASPASVTNS--PSKVKMTVSPT----------RSNQSTMQMTTN------------ 164
Query: 201 KNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRV 260
IPIA+LN Y W++ R+ +K +R++ +R GK+FS + D + EI+
Sbjct: 165 --------IPIASLNQYLTSWSLIVRIISKSQMRQFQGSR-PGKLFSIIMRDKNNDEIKG 215
Query: 261 TCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDS 320
T FN ++F ++E +VY +S G +K A + +N K+E+EI ++TS++ + +D+S
Sbjct: 216 TFFNQEAEKFENLVEQDKVYKVSCGRVKKANERYNSTKSEFEITFDSTSSI-IEIPDDNS 274
Query: 321 IPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRS 380
IP F IS+ S VD+I I+ + I K+G ++R + + D +G +
Sbjct: 275 IPANVLKFTKISDC-SKMTGKTVDIISIITFIGDCQTIKTKSGSSIEKRNITVSDETG-T 332
Query: 381 VELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAE 440
+E+TLWG + QK E + V++ V+DF G S+ S + +NP +
Sbjct: 333 IEVTLWGSSATEFDQKESE--------IFCVRNVTVSDFRGVSLNVGQSATIVVNPPDND 384
Query: 441 AHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFI 500
+R W++S + + + +S+I + + R+E + V I
Sbjct: 385 VKNIRNWYESLNDEKKENLKQKLLIPDYGQAATINCLSEIDEKQMCRTENGEVFCVNVMI 444
Query: 501 TFIKSDSF-CYTACPLMIGDRQCNKK---VTQSGNRWQCDRCNQEIDECDYRYLLQAQIQ 556
+ S Y ACP + C + Q + C +CN+E+ RY L +
Sbjct: 445 QDMPSSRKPVYQACP----NEACRGSGLIIDQETGKMICKKCNKEVTNPKLRYSLSLNVG 500
Query: 557 DQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFR-LKIKE 615
D +G ++ G+E P + ++E+ D + +R+ + + FR L++K
Sbjct: 501 DYSGSAYINVI---GDENSFMPLINVKPEEFEIDDTTK----LRTMLLKKSFFRALRVKV 553
Query: 616 ELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSF 651
E VK+T I +VN++ E+ + + I+ SF
Sbjct: 554 RGKNSEYGVKLTAISGGEVNFAEEALRIANNITASF 589
>gi|341897567|gb|EGT53502.1| hypothetical protein CAEBREN_14752 [Caenorhabditis brenneri]
Length = 658
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 157/620 (25%), Positives = 288/620 (46%), Gaps = 51/620 (8%)
Query: 39 YRFLISDSVSTQHAMLATQLNDRVK--TGQVKKGSVVQLIDYICSTVQNRKIIVVLNMET 96
YR + D V + +++ ++D+ K + +G+++ + + + V N
Sbjct: 62 YRMRVCDGVFQYNTLVSADIDDQTKREAEHLVEGAIIAITN-----------LTVFNQGN 110
Query: 97 IILDCEPIGNPKIFS--ESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQ 154
+ I K+ S S ++A + P + P Y N + TF++
Sbjct: 111 GVKTSLLITGYKLLSRYHSIMSAPELKPRGHTGNPDEHRGYRPSVVVEDNWPEAETFHTD 170
Query: 155 NPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQ----PPPNFRNHGPILKNEAPARIIP 210
+ S P + + +G + P + PPP R GP + ++P
Sbjct: 171 IRENMSNPPAAKAQKRESGGEASHNRAAAPEPQRARPNPPPARR--GP---SNTERGVMP 225
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
IA + PY + I +T K ++R + + KVF+F++ DS+G IR FN + +
Sbjct: 226 IAMITPYVNGFKINGTITRKEEIRSF--PAKNTKVFNFEITDSNGDTIRCVAFNELAESL 283
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRH 330
Y I Y IS G ++ A K FN+ +++EI L S V+ D + + +
Sbjct: 284 YSTITENLSYFISNGQVRQANKRFNNTGHDYEINLRNDSIVEAG---GDVVAAPKLHLKR 340
Query: 331 ISEIESAEN-NSIVDVIGIVISVNPS-VPILRKNGMETQRRILNLKDTSGRSVELTLWGD 388
IS E A + ++DV+ V ++P K G +R + L D SG V LTLWG+
Sbjct: 341 ISLGEIAGHCGEMIDVLAYVEKMDPEPTEFTSKAGKTLVKREMELIDESGAVVRLTLWGE 400
Query: 389 FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGTIPSTQLFINPDFAEAHELREW 447
+K L++ + V++ K +F+G S+GT +++ P+ + EL EW
Sbjct: 401 EASK--APLEDYL----HKVVAFKGVIPREFNGGYSLGTGFGSRVIAVPEISGVAELYEW 454
Query: 448 FDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGR-SEKPDWVTVRAFITFIKSD 506
+++ TV + G+ +E +T++ ++ G+ SEK D+V+V+A IT I +
Sbjct: 455 YNT---VKPTVDVKMISQTSGSSSEAPRTIAGLQEMQFGKDSEKGDYVSVKAMITRINPN 511
Query: 507 SFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTA 566
+ Y C C KKV +S ++C++CN+ + + Y++Q ++ D+TG +VTA
Sbjct: 512 NALYKGC----SSEGCQKKVIESDGDFRCEKCNKTMRHFKWLYMMQFELSDETGQVYVTA 567
Query: 567 FQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKI 626
F ++ +++G A E+ LK D+ + + F ++RL+ K E Y +E R K+
Sbjct: 568 FGDNATKVVGRTAAEVGELKEANPDE--YNAVFEKLQFIPKMWRLRCKMETYNEEVRQKM 625
Query: 627 TVIRADQVNYSSESRYLLDL 646
TV ++VN + +Y+ +L
Sbjct: 626 TVFGVEEVN---QDKYIENL 642
>gi|403370207|gb|EJY84965.1| hypothetical protein OXYTRI_17183 [Oxytricha trifallax]
Length = 684
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 225/454 (49%), Gaps = 38/454 (8%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
PI LN + W IKARV KG + + NA+G+G + + DL+D +G +I+ T F +
Sbjct: 240 PIRMLNNFTKDWKIKARVIQKGQKKEWRNAKGEGVLLNADLIDHEGTQIQATFFGEAAHK 299
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFR 329
+ +++ VYL S G +K A K F +KN+ + + + + ++D+ I Q FSF
Sbjct: 300 YDQMLHENHVYLFSNGQVKIANKKFTSIKNDHCLTFDQNAEISE-VQDDNQIKSQGFSFV 358
Query: 330 HISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDF 389
+ IE +DVIG++ ++ + I K+G RR + + D S + L+LWG+
Sbjct: 359 TLRNIEKVMAGQAIDVIGVITEISNTSSIPLKSGQNKDRRNITIADESEAKISLSLWGNL 418
Query: 390 CNK----EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQL-FINPDFAEAHEL 444
C + EGQ V++VK+ +V+D+ GKS+ L ++NP +L
Sbjct: 419 CTQYSYEEGQ------------VMAVKNVRVSDYGGKSLNCGDDHSLIYLNPADKRTDQL 466
Query: 445 REWFDSGG--KNAATVSISREIAAGGAKNE---IHKTVSQIKNEGLGRSEK--PDWVTVR 497
+W +GG KN +S G+++ + + + +E R++K P + +
Sbjct: 467 MQWSQTGGAKKNLQNLSGGVGGGDSGSRDNYRLVREMSDTLLHENSDRNDKTAPQYFKLS 526
Query: 498 AFITFIKSDS---FCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYR--YLLQ 552
+I+ I D + CP +C KK + G+++ C++CN+ ++ R Y +
Sbjct: 527 GYISKILYDENRMMYFPGCP------ECKKKCSPQGDQYWCEKCNKALNHNQVRMTYTVT 580
Query: 553 AQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRF-GEIIRSRVFNQYLFRL 611
A+ D + +++ ES E I+G PA + ++ + + + F +++ + FN Y F +
Sbjct: 581 AKFDDLSDGIFISFMSESAEPIMGMPASDFSRIREDQSNSLEFIRDLLNEKSFNYYTFVV 640
Query: 612 KIKEELYG-DEQRVKITVIRADQVNYSSESRYLL 644
K + Y +E R K +R+ ++ + E++ LL
Sbjct: 641 KAALDDYNINEARFKYQAVRSQPLDMNEENQMLL 674
>gi|402220694|gb|EJU00765.1| replication factor-a protein, partial [Dacryopinax sp. DJM-731 SS1]
Length = 493
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 147/561 (26%), Positives = 248/561 (44%), Gaps = 85/561 (15%)
Query: 42 LISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDC 101
++SD AMLA+Q N G + K +++ + S VQ++ II++L M+ + +
Sbjct: 2 MLSDGQRFTQAMLASQNNHFAIDGYLTKNCIIKATRFSRSKVQDKTIIIILAMDVVKQEK 61
Query: 102 EPIGNPK-IFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFS 160
E +G P+ I E AQ P+
Sbjct: 62 ERLGMPQSILDEGPTFAQPATPT------------------------------------- 84
Query: 161 TPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGR 220
+ + T +AG+ +SF +P I PI L+PY+ +
Sbjct: 85 STKTSTINKISAGAATKSFTKASGLKGEPT-----------------ITPINQLSPYRNQ 127
Query: 221 WAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
W +KAR+T K D+R+++N RG G +F+ + D + G I+ T F DR + IE G+VY
Sbjct: 128 WTVKARITKKSDVRKWSNERGSGYLFNCTMTD-ETGSIKATAFMEQCDRLLKEIEEGKVY 186
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENN 340
ISKG + PA+K +N ++EI ++ V+LC DDS FS+ ++ + +
Sbjct: 187 YISKGKILPAKKIYNTTGCDYEITFNESTNVELCN--DDSNMPGGFSYTVLANLGDLSKD 244
Query: 341 SIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEM 400
+ IG+V S + +N I + D SG S ++TLWG K+ E
Sbjct: 245 DTCNAIGVVRSRWRTWNNHEENSAPHAHII--IVDHSGFSCKVTLWG--------KVAED 294
Query: 401 VDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGG---KNAAT 457
DV PV++++ KV D+ G+ + + + +NPD EAH LR W+D+ G K
Sbjct: 295 FDVKDQPVIALRHVKVGDYHGRDLNFQGDSSMTLNPDLKEAHFLRGWYDANGLTYKFQPC 354
Query: 458 VSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITF---IKSDS----FCY 510
S +G + T+ ++K++ +G + + TV+ + IK ++ Y
Sbjct: 355 QGASGSGESGLVNHSQLMTLEEVKSKNIG-IKTTSYFTVKLRVKATPRIKEENRHMPISY 413
Query: 511 TACPLMIGDRQCNKKVT--QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQ 568
AC C K ++ S +W C +C+ D +YRYL++ + D G W +
Sbjct: 414 PACR----SEDCVKGLSYDDSDRKWHCAKCSGCFDAPEYRYLMRISLGDHMGSAWFNIYD 469
Query: 569 ESGEEILGCPAKELYMLKYEL 589
G+ + A+ L +K L
Sbjct: 470 NVGKLLFEKKAEVLEQMKVWL 490
>gi|224139098|ref|XP_002326767.1| predicted protein [Populus trichocarpa]
gi|222834089|gb|EEE72566.1| predicted protein [Populus trichocarpa]
Length = 122
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 95/121 (78%)
Query: 193 FRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLD 252
+ N G + +NEAP RI+PI ALNPY GRW IKAR KG+LR YNN RGD KV S DLLD
Sbjct: 2 YSNRGSVARNEAPPRIVPITALNPYHGRWTIKARAMTKGELRHYNNTRGDSKVLSSDLLD 61
Query: 253 SDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVD 312
DGGEIR TC N V D+FY IE GR+YLISKG+LKPAQ+NFNHL+++ EIFLE+TST+
Sbjct: 62 CDGGEIRATCSNQVADQFYNQIEAGRIYLISKGNLKPAQRNFNHLRHDLEIFLESTSTIQ 121
Query: 313 L 313
L
Sbjct: 122 L 122
>gi|260793787|ref|XP_002591892.1| hypothetical protein BRAFLDRAFT_89409 [Branchiostoma floridae]
gi|229277104|gb|EEN47903.1| hypothetical protein BRAFLDRAFT_89409 [Branchiostoma floridae]
Length = 256
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/292 (37%), Positives = 161/292 (55%), Gaps = 37/292 (12%)
Query: 53 MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQ-NRKIIVVLNMETIILDCEPIGNPKIFS 111
MLATQ N V + ++++ V++L YIC+T+Q NR+++++L ++ + I NP +
Sbjct: 1 MLATQQNSLVHSQKLQQNCVIRLEKYICNTIQDNRRVLIMLEVQVLGNPGNKIKNPTPVN 60
Query: 112 ESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPN 171
+ T T P+ PV+ N G + N G S NPG+ + PN G
Sbjct: 61 Q---TGGGTAPA-----PVQ-------NGGAAHAVNGGMNRSGNPGAGARPNQGA----- 100
Query: 172 AGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKG 231
AGS P P + PIA LNPYQ RW I+ARVT KG
Sbjct: 101 AGSSFYGRSNVTASPGTP--------------GRGKPTPIAGLNPYQNRWTIRARVTNKG 146
Query: 232 DLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQ 291
+R +NNARG+GK+FS DLLD + GEIR T FN D+FY++IE+G+VY SKGSLK A
Sbjct: 147 SIRTWNNARGEGKLFSMDLLD-ESGEIRATAFNDQCDKFYDLIEIGKVYFFSKGSLKTAN 205
Query: 292 KNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIV 343
K + ++N++E+ +TV LC +E D +P Q++F I ++E N+I+
Sbjct: 206 KQYTSIQNDYEMSFNNDTTVVLCEDEAD-LPSIQYNFVPIEKLEEMNPNTII 256
>gi|341899815|gb|EGT55750.1| CBN-RPA-1 protein [Caenorhabditis brenneri]
Length = 658
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 233/462 (50%), Gaps = 32/462 (6%)
Query: 189 PPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSF 248
PPP R GP + ++PIA + PY + I +T K ++R + + KVF+F
Sbjct: 209 PPPARR--GP---SNTERGVMPIAMITPYVNGFKINGTITRKEEIRSF--PAKNTKVFNF 261
Query: 249 DLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEAT 308
++ DS+G IR FN + + Y I Y I+ G ++ A K FN+ +++EI L
Sbjct: 262 EITDSNGDTIRCVAFNELAESLYSTITENLSYFITNGQVRQANKRFNNTGHDYEINLRND 321
Query: 309 STVDLCTEEDDSIPKQQFSFRHISEIESAEN-NSIVDVIGIVISVNPS-VPILRKNGMET 366
S V+ D + + + IS E A + ++DV+ V ++P K G
Sbjct: 322 SIVEAG---GDVVAAPKLHLKRISLGEIAGHCGEMIDVLAYVEKMDPEPTEFTSKAGKTL 378
Query: 367 QRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIG 425
+R + L D SG V LTLWG+ +K L++ + V++ K +F+G S+G
Sbjct: 379 VKREMELIDESGAVVRLTLWGEEASK--APLEDYL----HKVVAFKGVIPREFNGGYSLG 432
Query: 426 TIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGL 485
T +++ P+ + EL EW+++ TV + G+ +E +T++ ++
Sbjct: 433 TGFGSRVIAVPEISGVAELYEWYNT---VKPTVDVKMISQTSGSSSEAPRTIAGLQEMQF 489
Query: 486 GR-SEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDE 544
G+ SEK D+V+V+A IT I ++ Y C C KKV +S ++C++CN+ +
Sbjct: 490 GKDSEKGDYVSVKAMITRINPNNALYKGC----SSEGCQKKVIESDGDFRCEKCNKTMRH 545
Query: 545 CDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVF 604
+ Y++Q ++ D+TG +VTAF ++ +++G A E+ LK D+ + + F
Sbjct: 546 FKWLYMMQFELSDETGQVYVTAFGDNATKVVGRTAAEVGELKEANPDE--YNAVFEKLQF 603
Query: 605 NQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDL 646
++RL+ K E Y +E R K+TV ++VN + +Y+ +L
Sbjct: 604 IPKMWRLRCKMETYNEEVRQKMTVFGVEEVN---QDKYIENL 642
>gi|403342085|gb|EJY70353.1| hypothetical protein OXYTRI_08899 [Oxytricha trifallax]
Length = 769
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 218/457 (47%), Gaps = 48/457 (10%)
Query: 204 APARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCF 263
+ A I+PI ALN + W I+AR+ K D R+ N G + +++D I T F
Sbjct: 300 SEANIMPIKALNTFSRDWKIQARIVQKSDKRQTKNG---GSLLKMEIVDRYNTPIEATFF 356
Query: 264 NAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPK 323
N D F I VG+VY GS+K A K F +KN++ + E +S + + D SI +
Sbjct: 357 NDAADFFEHKIHVGKVYDFCDGSIKLANKKFTTVKNDFTLTFEKSSQITEVAD-DGSISQ 415
Query: 324 QQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVEL 383
+ F ++ IS+ E + +D+IG+V+ + I KN + QRR + + D S S+ L
Sbjct: 416 ETFEYQPISKCEDLTVGASIDLIGVVLDITSCDTIKLKNNRQKQRRYITIIDESFCSISL 475
Query: 384 TLWGD-FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPS-TQLFINPDFAEA 441
T+WG+ FC Q M +VG +L++K G++++F GK+I + +NP
Sbjct: 476 TIWGEGFC-------QRMNEVGQGDILAMKGGRLSEFGGKTINVADDHASIMVNPSNPRG 528
Query: 442 HELREWF---DSGG-------KNAATVSISREIAAG-------------GAKNEIHKTVS 478
++ +W+ GG K+ + + SR A N I + S
Sbjct: 529 KKVYDWYIQQVQGGEESMKQIKHLSNLQSSRSDKAELNVVDQSNDKQRRNQLNFICEITS 588
Query: 479 QIKNEGLGRSEKPDWVTVRAFITFIKSDS-FCYTACPLMIGDRQCNKKVT----QSGNRW 533
+++E ++ + + +I+ IK+D Y ACP + C +KVT Q G +
Sbjct: 589 MLQDE--NDVDQQHFFFLNGYISLIKNDDKIFYIACP----NDNCRRKVTEEHQQQGQAY 642
Query: 534 QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDV 593
+C+ CN+ C Y++QA+I D T ++ +++G ++G A+E + ++
Sbjct: 643 RCEACNKVYRTCQPTYMIQAKITDFTDTIYINFPRDNGTALMGMTAQEFKHFRDRATEE- 701
Query: 594 RFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIR 630
S +F Q+ +K K E YG E R++ I+
Sbjct: 702 ELSAYFDSLLFKQFNIMVKGKFEFYGGENRMRFFAIK 738
>gi|302822669|ref|XP_002992991.1| hypothetical protein SELMODRAFT_431158 [Selaginella moellendorffii]
gi|300139191|gb|EFJ05937.1| hypothetical protein SELMODRAFT_431158 [Selaginella moellendorffii]
Length = 390
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 203/407 (49%), Gaps = 31/407 (7%)
Query: 246 FSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLIS-KGSLKPAQKNFNHLKNEWEIF 304
SFD++D G EIR+ + + I G VY S G ++ + + + + WEI
Sbjct: 1 MSFDVVDVQGTEIRIIGSDDCALVLSDKIVQGTVYSFSGSGGIRRSNQAYTPFEVTWEI- 59
Query: 305 LEATSTVDLCT-EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNG 363
+A ++ +ED + P+ + I E +S VDV+GIVI + R +G
Sbjct: 60 -QANKGMEFTALDEDATFPRIVLAKTSILSACQKERDSFVDVVGIVIWIGTITVTSRDSG 118
Query: 364 METQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS 423
++R L L D SG SV+L LW +EG +QE +D G P++ VK GKV+D++GKS
Sbjct: 119 TFVKKRTLCLGDDSGHSVDLCLWDLKAEEEGSYIQERIDSGVQPIICVKGGKVSDYNGKS 178
Query: 424 IGTIPSTQLFINPDFAEAHELREW----FDSGGKNAATVSISREIAAGGAKNEIHKTVSQ 479
+ I + + I P+ +LREW ++ + S SR+ + T+S+
Sbjct: 179 LSAIGVSTILIEPEMEAVADLREWMTLYYNVTNFIHLSTSSSRQTVS------CTTTLSE 232
Query: 480 IKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCN 539
I N L E V A + +K+D F Y AC ++ RQC KK T++ + W C CN
Sbjct: 233 ISNMQLKVLESSPIYRVIATVKEMKTDEFYYNACINVLNARQCGKKTTRTADGWFCSYCN 292
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYE-------LQDD 592
E +++Y L+ I+D + W AFQE+ +EI+G AKEL ++ E L D
Sbjct: 293 IESANMEFKYALKMCIEDSSSHVWAIAFQEAAQEIVGMSAKELATMRDENYPAFSLLIDG 352
Query: 593 VRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVK-ITVIRADQVNYSS 638
IRS++ Y F++ K E Y D +++ + + + +++ ++S
Sbjct: 353 ------IRSKI---YKFKIWSKLEKYQDMEKLSYMELAKTNKIKHTS 390
>gi|354507912|ref|XP_003515998.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Cricetulus griseus]
Length = 218
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 142/228 (62%), Gaps = 11/228 (4%)
Query: 221 WAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
W I ARVT K +R ++N+RG+GK+FS +L+D + GEIR T FN VD+F+ +IEV +VY
Sbjct: 1 WTICARVTNKSQIRTWSNSRGEGKLFSIELVD-ESGEIRATAFNEQVDKFFPLIEVNKVY 59
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENN 340
SKG+LK A K F+ +KN++E+ ++V C E+ +P QF F IS++ES +
Sbjct: 60 YFSKGTLKIANKQFSAVKNDYEMTFNNETSVLPC-EDGHHLPTVQFDFTGISDLESKSKD 118
Query: 341 SIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQE 399
S+VD+IGI S S I ++ + E +R + L D SG+ V TLWG+ +K Q
Sbjct: 119 SLVDIIGICKSYEDSTKITVKSSNREVAKRNIYLMDMSGKVVTATLWGEDADKFDGSRQ- 177
Query: 400 MVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREW 447
PV+++K +V+DF G+S+ + S+ + +NPD EA++LR W
Sbjct: 178 -------PVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGW 218
>gi|159480170|ref|XP_001698157.1| replication protein A, 70 kDa DNA-binding subunit [Chlamydomonas
reinhardtii]
gi|158273655|gb|EDO99442.1| replication protein A, 70 kDa DNA-binding subunit [Chlamydomonas
reinhardtii]
Length = 647
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 157/650 (24%), Positives = 301/650 (46%), Gaps = 54/650 (8%)
Query: 23 LVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICST 82
+++V +++ +G ++++ ++SD ++ +LA+Q D V +G++ G ++++ ++ +T
Sbjct: 26 VLRVSELQEVGG--KKHKCMLSDGNNSIRGVLASQFADLVASGELSNGCLIKITAFVTNT 83
Query: 83 VQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGT 142
+ + +++ ++ + G K+ ++ L A+ + P +P ++ + P++
Sbjct: 84 IGSDDVVLATDLSVV---SPGTGIVKMEVDNALNARNSTP-EAAGKPQAKSSTADPDAKE 139
Query: 143 FNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKN 202
+ +S+ PG +P S AP PT P + +NH I
Sbjct: 140 NSTPGPDFKSSKTPGPGLSPVSFFSPAPTPTGAGIKTAPT-PPSTMGVSDRKNHHKI--- 195
Query: 203 EAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTC 262
A L+PY+ W I+A+V K LR ++ D KV + DL+D G I+ T
Sbjct: 196 ---------AQLHPYETNWCIRAKVDRKAPLRALP-SKPDVKVMTVDLVDETGTAIQGTF 245
Query: 263 FNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIP 322
+ +R E + G+VY+ K +KPA K + +KNE++I T+ V ++D S
Sbjct: 246 WRGPAERMSEQLVEGKVYVFHKFKVKPADKKYVTVKNEYQIDFTDTTDVSEAADQDSSAM 305
Query: 323 KQQFSFRHISEI-ESAENNSIVDVIGIVISVNPSVPILRK-NGMETQRRILNLKDTSGRS 380
I ++ + VDV+G+V+++ + RK + E RR + + D SG+S
Sbjct: 306 TTAVEVTPIEQLPRRIGQRAPVDVMGVVLALGSYGTVKRKADNSELPRREVTIGDQSGKS 365
Query: 381 VELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAE 440
V +TLWGD + Q+L+ M VL V +V D++G S+ T+ + INP+
Sbjct: 366 VAITLWGDMSSTTAQQLEGMEGRA---VLQVTGCRVTDYNGCSLSTLSKSVASINPETPA 422
Query: 441 AHELREWFDSGGKN-------AATVSISREIAAGGAKNEIH----------KTVSQI--K 481
A ++ W+ + N A + ++R G K VS + +
Sbjct: 423 AQQMMLWYKTSEMNPDRFTAVGADLVMARGSQGGSQGGAGGVPARERYFSLKDVSGLTAE 482
Query: 482 NEGLGRSEKPDWVTVRAFITFIKSD--SFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCN 539
E L ++K + V A + I +D + Y A P K V Q G R+ + +
Sbjct: 483 TEALA-NDKAIFQNVTACVAMINNDDKNIFYLANP-----ENGRKVVDQGGGRFWSEADS 536
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEII 599
+ +++ ++RYLL ++ D TG T V F + E ++G A EL LK + F +
Sbjct: 537 KVVEKPEHRYLLSVRLADHTGETNVQLFGKEAEAVMGMRADELAALKEAGGEG--FAGAL 594
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
++ + + + K Y + V+ + + + +++ SES L+ LI+K
Sbjct: 595 KAAQWKPWQVVVMSKAREYNGNRSVRHSAYKVENIDWVSESSRLVTLIAK 644
>gi|335748685|gb|AEH58815.1| replication protein A large subunit [Karenia brevis]
Length = 458
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 215/463 (46%), Gaps = 29/463 (6%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYN--NARGDGKVFSFDLLDSDGGEIRVTCFNA 265
+PIA L+ Y+ +W IK RVT KG LR +N + GKVF +LLD++GGEIR + FN
Sbjct: 6 FMPIAELSTYRTKWTIKGRVTNKGPLRTFNKQGSATQGKVFHVELLDAEGGEIRASFFND 65
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQ 325
DR + ++E G+ + +SKG ++ A K +N + +E+ + + ++ T +D SI +
Sbjct: 66 AADRLFNVLEPGKCFTLSKGQIRVANKQYNPTSHRYELIFDREAIIEPAT-DDASINAIK 124
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
FSF ++ + S + +D+ G++ S K+G E +R + + D SG S+ +TL
Sbjct: 125 FSFTNLKAVASRQLPCSIDICGVITSFTAPASRTGKDGQELTKREIQVADDSGTSISVTL 184
Query: 386 WGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGT-IPSTQLFINPDFAEAHEL 444
WG +E + + P +++K V ++ G G+ + S L P EA +
Sbjct: 185 WGXRAKQEDKNFEGQ------PTVALKGVLVKEWQGGRQGSLLQSGTLQFKPAMPEAQRV 238
Query: 445 REWFDSGGKNAATVSISREIAAGG----AKNEIHKTVSQIKNEG---LGRSEKPDWVTVR 497
++W+ GG + +S+ GG ++N T++ ++ L + E + V
Sbjct: 239 QQWWSQGGSAQSFADLSQTTGGGGESARSRNAKPMTIAGMRAAAERLLDQVEIYNVVCRL 298
Query: 498 AFITFIKSDS---FCYTAC--PLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQ 552
A + K Y AC P CN++V SG C+R + R ++
Sbjct: 299 ALVQLRKQGEIQPLQYLACQEPKEGNGLPCNRRVDASGFCATCNRAGKTAP----RLTVR 354
Query: 553 AQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVR--FGEIIRSRVF-NQYLF 609
+ D W+T F E + IL E+ L+ ++ R IR R F +
Sbjct: 355 CRFVDCEDQAWLTTFHEPAQRILDMTGDEVRALELLEEEGGREKLEASIRQRYFATPFTV 414
Query: 610 RLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSFR 652
++ K + Y E R IT I A V+ R LL I + +
Sbjct: 415 TVRAKMDSYNGEPRTNITAIEARPVSRGEHGRALLKEIQEMLK 457
>gi|67972174|dbj|BAE02429.1| unnamed protein product [Macaca fascicularis]
Length = 268
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 156/278 (56%), Gaps = 16/278 (5%)
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
DTSG+ V TLWGD +K Q PVL++K +V+DF G+S+ + S+ +
Sbjct: 2 DTSGKVVTATLWGDDADKFDGSRQ--------PVLAIKGARVSDFGGRSLSVLSSSTIIA 53
Query: 435 NPDFAEAHELREWFDSGGKNAATVSISREIAAG-GAKNEIHKTVSQIKNEGLGRSEKPDW 493
NPD EA++LR WFD+ G+ VSIS + G G N KT+ ++K+E LG+ +KPD+
Sbjct: 54 NPDIPEAYKLRGWFDAEGQALDGVSISDLKSGGVGGGNTNWKTLYEVKSENLGQGDKPDY 113
Query: 494 VTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQ 552
+ A + +++ ++ Y ACP + CNKKV Q ++C++C+ E YR +L
Sbjct: 114 FSSVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILS 169
Query: 553 AQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLK 612
I D WVT FQES E ILG A L LK +++ F E+ ++ F ++FR++
Sbjct: 170 VNIADFQENQWVTCFQESAEAILGQNAAYLGELK--DKNEQAFEEVFQNANFRSFIFRVR 227
Query: 613 IKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
+K E Y DE R+K +V+ V+Y R L+ I +S
Sbjct: 228 VKVETYNDESRIKASVMDVKPVDYREYGRRLVLSIRRS 265
>gi|335748585|gb|AEH58813.1| replication protein A large subunit [Karenia brevis]
Length = 460
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 229/464 (49%), Gaps = 34/464 (7%)
Query: 207 RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV 266
+ PI+ ++PY +W IKARVT+K +R + + GKVFS DLLD+ GGEIR T FN
Sbjct: 6 QFFPISEISPYHTKWTIKARVTSKAPVRTFG--KSGGKVFSVDLLDALGGEIRSTFFNQA 63
Query: 267 VDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQF 326
D+F ++++ G + SKG ++ A + + L + +E+ +A + ++ +E +I +F
Sbjct: 64 ADKFLDVLKPGACFTFSKGRVRIADRRYTALNHRYELIFDADAIIEPAKDE-GTIEALKF 122
Query: 327 SFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLW 386
+ + I+S VD+ G+V +V P + + K G E +R + + D + S+ +TLW
Sbjct: 123 NITSLRAIQSKTLPCGVDLCGVVTAVRPLMTVRNKEGQELLKRDITIADDTATSMTVTLW 182
Query: 387 GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGT-IPSTQLFINPDFAEAHELR 445
+ +E + + +PV+ VK V +++G G+ + S L P F EA ++
Sbjct: 183 AERAKQEDRVFEG------YPVVGVKGVTVKEWNGGRGGSLLASGALVFKPTFEEAKRVQ 236
Query: 446 EWFDSGGKNAATVSISREIAAGGA---KNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITF 502
+W+ GG + + IS+ G +N T++ ++ +++P+ +V A +
Sbjct: 237 QWWSEGGSSQTLLDISQTTGGDGGGRNRNAAAATLAGVRQAADRLTDQPEIFSVAARLAI 296
Query: 503 IKS------DSFCYTAC--PLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQ 554
++ Y AC P CN++V SG C CN+ + R ++ +
Sbjct: 297 VQMRKQGEVQPLQYLACQEPRENSSLPCNRRVDSSGF---CSFCNR-AGKVAARLNIRCR 352
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGE--------IIRSRVFNQ 606
D W+T F E+ + +LG A+++ ++ D++ GE +R+R F +
Sbjct: 353 FVDFEDQAWMTTFHEAAQRVLGMSAEDVRAMEQGTGDEMADGEDRREKLEAAVRARYFEK 412
Query: 607 YL-FRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
L ++ K + Y E R ITV+ A ++ R +L I++
Sbjct: 413 PLSLVVRAKLDTYNGEVRPNITVVDARPISRGEHGRVMLKEINQ 456
>gi|260793785|ref|XP_002591891.1| hypothetical protein BRAFLDRAFT_89408 [Branchiostoma floridae]
gi|229277103|gb|EEN47902.1| hypothetical protein BRAFLDRAFT_89408 [Branchiostoma floridae]
Length = 265
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 147/272 (54%), Gaps = 15/272 (5%)
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP 436
SG+ V LTLWG +K D PV+++K +++DF G+S+ T+ S+ + INP
Sbjct: 2 SGKQVNLTLWGGEADK--------FDGSSSPVVAIKGARLSDFGGRSLSTVGSSTIMINP 53
Query: 437 DFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTV 496
D EA++LR W+D G NA SIS G + K+ Q+K+E LG EKPD+ T
Sbjct: 54 DIPEAYQLRGWYDKVGCNAEAQSISTGAGGGAGRPTNWKSFQQVKDENLGTGEKPDFFTT 113
Query: 497 RAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNR-WQCDRCNQEIDECDYRYLLQAQI 555
+ I F+K ++ Y ACP + CNKKV N + C++C++E YR +L A +
Sbjct: 114 KGTIVFLKKENSMYQACPT----QDCNKKVVDLQNGFFSCEKCSKEFPNFKYRMILSANV 169
Query: 556 QDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKE 615
D +G W T FQE+ E ILG + L LK QDD + ++ F Y+F +++K
Sbjct: 170 ADFSGNQWTTCFQETAETILGQNTEYLGNLK--DQDDTAYDQVFTEANFKSYIFNMRVKM 227
Query: 616 ELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
+ Y DE R++ +++ S+ L++ I
Sbjct: 228 DTYNDESRIRCICNGIQPLDFKEYSKKLINDI 259
>gi|123446475|ref|XP_001311988.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121893818|gb|EAX99058.1| hypothetical protein TVAG_433860 [Trichomonas vaginalis G3]
Length = 659
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 227/454 (50%), Gaps = 35/454 (7%)
Query: 208 IIPIAALNPY-QGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV 266
IIPI+AL Y W I+ R+ + D R Y N G+GK+ + + D G IR T FN
Sbjct: 227 IIPISALCQYTHPGWMIRVRIVSISDPRTYRN--GEGKLMNITMKDDSGTSIRGTFFNEN 284
Query: 267 VDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI-FLEATSTVDLCTEEDDSIPKQQ 325
VDR+ +++ VY +S G +K A K +N+ N++EI F +ATS D ++D SI
Sbjct: 285 VDRWQPKLKLNNVYKVSGGRVKVANKEYNNTGNDYEISFDDATSIED--DQDDGSISTLS 342
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
F+F + ++ +N+ VD+IG V + + +V K G +R L + D + +ELT
Sbjct: 343 FNFVKLDQLAERPDNTTVDIIGWVTTSDQAVTFTSKKGNTMLKRRLEIADDTNSKIELTF 402
Query: 386 WGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELR 445
+G N KL E + VL+ +++ F GKS+ T+ L + P E + +R
Sbjct: 403 FGYLAN----KLPEEPNY----VLAAGPCRISPFRGKSL-TMFDGNLQVEPAIPETNAIR 453
Query: 446 EWFDSGGKN--AATVSISR-EIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITF 502
W++ G+ S+S ++ GG +H +S I +GLG++EK D+ A++T
Sbjct: 454 AWWNQTGQFTLGEMKSLSNGDVGMGGNSQTLH--LSAIDEQGLGQNEKGDYFM--AYVTL 509
Query: 503 IKSDS---FCYTACPLMIGDRQC-NKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQD 557
+ S FCY ACP + C NK +T + C++C Q+ +R++ +I D
Sbjct: 510 AELSSNKKFCYAACP----NEDCKNKGLTPNEDGTYFCEKC-QQPKTPRWRWMFNTKISD 564
Query: 558 QTGLTWVTAF--QESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKE 615
+G + + + G+ I G EL+ +++D+ + F RL +
Sbjct: 565 FSGSLYASVIGNDQVGDLIFGKKVNELHDELADVKDEETM-KFTMPLFFRNLKVRLNARL 623
Query: 616 ELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+ YG E R+K+ ++ A ++NY+ +++ I K
Sbjct: 624 DNYGMESRIKVNIVGASEMNYAEAAKFFASEIEK 657
>gi|302795292|ref|XP_002979409.1| hypothetical protein SELMODRAFT_419097 [Selaginella moellendorffii]
gi|300152657|gb|EFJ19298.1| hypothetical protein SELMODRAFT_419097 [Selaginella moellendorffii]
Length = 389
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 204/407 (50%), Gaps = 32/407 (7%)
Query: 246 FSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLIS-KGSLKPAQKNFNHLKNEWEIF 304
SFD++D G EIR+ + + I G VY S G ++ + + + + WEI
Sbjct: 1 MSFDVVDVQGTEIRIIGSDDCALVLSDKIVQGIVYSFSGSGGIRRSNQAYTPFEVTWEI- 59
Query: 305 LEATSTVDLCT-EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNG 363
+A ++ +ED + P+ + I E +S VDV+GIVI + R +G
Sbjct: 60 -QANKGMEFTALDEDATFPRIVLAKTSILSACQKERDSFVDVVGIVIWIGTITVTSRDSG 118
Query: 364 METQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS 423
++R L L D SG SV+L LW +EG +QE +D G P++ VK GKV+D++GKS
Sbjct: 119 TFVKKRTLCLGDDSGHSVDLCLWDLKAEEEGSYIQERIDSGVQPIICVKGGKVSDYNGKS 178
Query: 424 IGTIPSTQLFINPDFAEAHELREW----FDSGGKNAATVSISREIAAGGAKNEIHKTVSQ 479
+ I + + I P+ +LREW ++ + S SR+ + T+S+
Sbjct: 179 LSAIGVSTILIEPEMEAVADLREWMTLYYNVTNFIHLSTSSSRQTVS------CTTTLSE 232
Query: 480 IKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCN 539
I N L E V A + +K+D F Y AC ++ RQC KK T++ + W C CN
Sbjct: 233 ISNMQLKVLESSPIYRVIATVKEMKTDEFYYNACINVVNARQCGKKTTRTADGWFCSYCN 292
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYE-------LQDD 592
E +++Y L+ I+D + + W AFQE+ +EI+G AKEL ++ E L D
Sbjct: 293 IESANMEFKYALKMCIEDSSHV-WAIAFQEAAQEIVGMSAKELATMRDENYPAFSLLIDG 351
Query: 593 VRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVK-ITVIRADQVNYSS 638
IRS++ Y F++ K E Y D +++ + + + +++ ++S
Sbjct: 352 ------IRSKI---YKFKIWSKLEKYQDMEKLSYMELAKTNKIKHTS 389
>gi|72168826|ref|XP_786722.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Strongylocentrotus purpuratus]
Length = 305
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 166/297 (55%), Gaps = 17/297 (5%)
Query: 344 DVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVD 402
+VIG+ S + + ++ + E +R L L D S + V LTLWG K E D
Sbjct: 3 NVIGVCKSTSDLTAVTIKSSNREVNKRSLQLVDDSQKEVSLTLWG--------KEAEDFD 54
Query: 403 VGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGG--KNAATVSI 460
PV++VK +++ F G+S+ + ++ +NPD +AH L+ WFDS G +++ ++S
Sbjct: 55 GSGNPVIAVKGARLSGFGGRSLSVLQNSIFQVNPDIPKAHHLKGWFDSEGHSQDSQSIST 114
Query: 461 SREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDR 520
+ GG N T + + LG+ EKPD+ TV+ I F++ ++ Y ACP
Sbjct: 115 RQGSGGGGGANTNWMTFHDVHAQNLGQGEKPDYFTVKGTILFVRKENCMYMACP----SA 170
Query: 521 QCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPA 579
+CNKKV+++G+ ++C++C+++ + YR LL A + D T W T FQE+ E++L A
Sbjct: 171 ECNKKVSENGDGSYRCEKCSKDYENFKYRLLLSANVADSTDNQWATCFQETAEQLLLKSA 230
Query: 580 KELYMLKYELQ-DDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVN 635
+EL LK + + + F ++ + F Y+FR++IK E Y +E R+K T + A +N
Sbjct: 231 QELGSLKDQGEATEKEFNQVFQDACFIDYMFRMRIKMETYNEEARLKCTCVSAQPIN 287
>gi|403360589|gb|EJY79974.1| Replication protein A 70 kDa DNA-binding subunit [Oxytricha
trifallax]
Length = 733
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 191/400 (47%), Gaps = 33/400 (8%)
Query: 207 RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDG-----KVFSFDLLDSDGGEIRVT 261
+ PI+AL+ W IKAR+T K ++R+Y R +G K+ + DL+D G +I T
Sbjct: 215 QFTPISALSQNSQDWRIKARITKKYEMRQYTQTRRNGEKFPGKILNIDLIDGHGAQIMGT 274
Query: 262 CFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSI 321
FN RF I+ +VY IS G +K + + F +KNE+ + S +D+SI
Sbjct: 275 FFNDTATRFDSKIKENKVYTISGGQIKLSNQKFTAIKNEFCLIFTDHSEFKEAV-DDESI 333
Query: 322 PKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSV 381
FSF I +I++ N +D IGI P K+G + QR + L D S +++
Sbjct: 334 QSVAFSFVSIQDIKNMYGNKTIDFIGIAQYCQPVKEKQLKSGTKAQRTVY-LADESNQTI 392
Query: 382 ELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEA 441
L +WGD N+ + E PV++VK +++F G+S+ + +Q+ +NP
Sbjct: 393 ALCIWGDLANQFDLSIDE------HPVIAVKRANLSEFGGRSLNSNEDSQVIVNPSHPRT 446
Query: 442 HELREWFDSGGKNAATVSISREIAAGGAKNEI-------HKTVSQIKNEGLGRSEK---- 490
+L+ WF+ + SI+ + G E + + +I E L +K
Sbjct: 447 QQLKHWFNHLADPSQLSSITVQKEKGEFPEEKKSFNFDNQRFLGEIM-EALYSGDKSIVD 505
Query: 491 ---PDWVTVRAFITFIKSDSFC-YTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECD 546
+ V A+I +K+D Y ACP + C +KV + W+C C++ C
Sbjct: 506 QSLASYFYVSAYIWILKNDDRTYYLACP----NDDCKRKVIEESVGWRCQSCDRTYQTCI 561
Query: 547 YRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLK 586
Y+L A++ D + ++ +++ G I+G PA +L +K
Sbjct: 562 PTYMLSAKLADASDAQFINFYKQEGTLIMGLPADKLKEIK 601
>gi|341875977|gb|EGT31912.1| hypothetical protein CAEBREN_17155 [Caenorhabditis brenneri]
Length = 1297
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 223/460 (48%), Gaps = 39/460 (8%)
Query: 194 RNHGPILKNEAPAR----IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFD 249
R P L+ AP+ ++PIA + + I +T K +R + + KVF+F+
Sbjct: 859 RAPAPELQRRAPSNTDRDVMPIAMITQNVYGFKINGTITRKEAIRTF--PPKNTKVFNFE 916
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
+ DS+G IR FN + + Y I Y I+ G + PA K FN+ +++EI L S
Sbjct: 917 VTDSNGDTIRCVAFNELAESLYSTITENVSYFITNGKVVPANKRFNNTGHDYEINL---S 973
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIESA-ENNSIVDVIGIVISVNPS-VPILRKNGMETQ 367
V + D + + + + IS E A + +DV+ V ++P K G
Sbjct: 974 NVSIVEPGGDVVAAPKLNLKRISLGEIAGHSGERIDVLAYVEKMDPKPTEFTSKAGKTVV 1033
Query: 368 RRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGT 426
+R + L D S R V+LTLWG+ K L ++ V F V+ K DF+G S+GT
Sbjct: 1034 KRDMELIDESNRFVKLTLWGEEAIK-ADYLHKV--VAFKGVIPKK-----DFNGAYSLGT 1085
Query: 427 IPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLG 486
++ +P+ + EL EW+ + + G+ +E +T++ ++ G
Sbjct: 1086 GYGARIIADPEISGVTELYEWYKT----------VKPTKPSGSSSEAPRTIAGLQKMQFG 1135
Query: 487 RSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECD 546
SEK D+ +V+A IT I ++ Y C C KKV + ++C++CN+ +
Sbjct: 1136 DSEKGDFASVKAMITRINPNTALYKGC----SSEGCQKKVIELDGEFRCEKCNKTMRHFK 1191
Query: 547 YRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQ 606
+ Y++Q ++ D+TG +VTAF ++ +++G A E+ LK + + + F
Sbjct: 1192 WLYMMQFELSDETGQVYVTAFGDNATKVVGRTAAEVGELKETKPGE--YNAVFEKLKFVS 1249
Query: 607 YLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDL 646
++RL+ K E Y +E R K+TV ++VN + +Y+ DL
Sbjct: 1250 KMWRLRCKMETYNEEVRQKMTVFGVEEVN---QDKYIGDL 1286
>gi|302792122|ref|XP_002977827.1| hypothetical protein SELMODRAFT_417572 [Selaginella moellendorffii]
gi|300154530|gb|EFJ21165.1| hypothetical protein SELMODRAFT_417572 [Selaginella moellendorffii]
Length = 372
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 194/400 (48%), Gaps = 42/400 (10%)
Query: 246 FSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLIS-KGSLKPAQKNFNHLKNEWEIF 304
SFD++D G EIR+ + + I G VY S G ++ + + + + WEI
Sbjct: 1 MSFDVVDVQGTEIRIIGSDDCALVLSDKIVQGTVYSFSGSGGIRHSNQAYTPFEATWEI- 59
Query: 305 LEATSTVDLCT-EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNG 363
+A ++ +ED P+ + I E +S VDV+GIVI + R +G
Sbjct: 60 -QANKGMEFTALDEDAMFPRIVLAKTSILSACQKERDSFVDVVGIVIWIGTITVTSRDSG 118
Query: 364 METQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS 423
++R L L D SG SV+L LW +EG +QE +D G P++ VK GKV+D++GKS
Sbjct: 119 TFVKKRTLCLGDDSGHSVDLCLWDLKAEEEGSYIQERIDSGVQPIICVKGGKVSDYNGKS 178
Query: 424 IGTIPSTQLFINPDFAEAHELREW----FDSGGKNAATVSISREIAAGGAKNEIHKTVSQ 479
+ I + + I + +LREW ++ + S SR+I + T+S+
Sbjct: 179 LSAIGVSTILIELEMEAVADLREWMTLYYNVTNFIHLSTSSSRQIVS------CTTTLSE 232
Query: 480 IKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCN 539
I N V A + +K+D F Y AC ++ RQC KK TQ+ + W C CN
Sbjct: 233 ISN------------IVIATVKEMKTDEFYYNACINVVNARQCGKKTTQTADGWFCSYCN 280
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYE-------LQDD 592
+++Y L+ I+D + W AFQE+ +EI+G AKEL ++ E L D
Sbjct: 281 IVSANMEFKYALKMCIEDSSSHMWAIAFQEATQEIVGMSAKELATMRDENYPAFSLLIDG 340
Query: 593 VRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRAD 632
IRS++ Y F++ K E Y D ++++ ++ D
Sbjct: 341 ------IRSKI---YKFKIWSKLEKYQDMEKLRFYILGLD 371
>gi|123394470|ref|XP_001300571.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121881632|gb|EAX87641.1| hypothetical protein TVAG_226230 [Trichomonas vaginalis G3]
Length = 590
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 136/462 (29%), Positives = 226/462 (48%), Gaps = 37/462 (8%)
Query: 204 APARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDG-KVFSFDLLDSDGGEIRVTC 262
A A I++L+ Y + I ARV K + N G K+ + L D G+I+ T
Sbjct: 147 AQAHFASISSLSAYISNFTILARVVKK----EFKNLESKGLKILTLILADK-SGDIKATA 201
Query: 263 FNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEED-DSI 321
+ ++F E++E +VY I+ G + A+K +N K++ EI + + +L D + I
Sbjct: 202 WRDHAEKFNELVEENQVYAITGGKVSFAKKQYNPTKHDCEITFDGNTKFELVNNADTEEI 261
Query: 322 PKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSV 381
K +F+F ISEI++ ++ VD++G+ I + PS K G E R + + D S R +
Sbjct: 262 GKTKFNFVKISEIDNLAKDATVDIVGVAIDIQPSQMKRLKTGREVNHRSIEIADDSDRKI 321
Query: 382 ELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP-DFAE 440
EL LW C ++V G P++ +K K+ +F+G+ T+ T + ++P D E
Sbjct: 322 ELNLWDRNC--------DLVQEGSNPIIVLKDAKIGEFNGRKNLTV-GTLIQVDPSDIQE 372
Query: 441 AHELREWFDSGGKNAATVSISREIAAGGAKNEIHKT----VSQIKNEGLGRSEKPDWVTV 496
A++LREW+ SG N + SI + GG N +T + I +E LG + D+ V
Sbjct: 373 ANDLREWY-SG--NPSLSSIKALSSTGGVDNSNRRTPIVMIKTIMDENLGGNGHTDYFDV 429
Query: 497 RAFITFIK-SDSFCYTACPLMIGDRQCN-KKVTQSGNRWQCDRCNQEIDECDYRYLLQAQ 554
A I I SF Y ACP + +C+ K + C+ C I + RY +
Sbjct: 430 IASIYNITPQRSFFYLACP----NEKCSFKGLKDRDGGLFCESCGNMITDPVPRYNYKIG 485
Query: 555 IQDQTG-LTWVTAF--QESGEEILGCPA----KELYMLKYELQDDVRFGEIIRSRVFNQY 607
I D TG + +V F E+ + I+G A KEL L E + ++ ++
Sbjct: 486 ITDFTGTVMFVQVFGGGENIDRIMGMNAAEFKKELESLDAEDKIAAMLDKVTNRLKGKEF 545
Query: 608 LFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+FRLK E +Y ++ ++ V+ +V Y + S+ LL+ I+K
Sbjct: 546 MFRLKANENVYNEKSTIRFNVVNTFEVKYDTASKRLLEEIAK 587
>gi|391326773|ref|XP_003737886.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Metaseiulus occidentalis]
Length = 393
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/437 (29%), Positives = 216/437 (49%), Gaps = 76/437 (17%)
Query: 22 PLVQVMDIKLIGSTQERYRFLISDSVST-QHAMLATQLNDRVKTGQVKKGSVVQLIDYIC 80
P++QV+D+K + + R+R + D V + M+++Q +K ++K ++++ +
Sbjct: 26 PVLQVVDLKPVKDS--RFRAYLWDGVEQFNYGMISSQAIPPIK-DKLKPNCLLKVNTFSL 82
Query: 81 STVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNS 140
+ ++R II++++ E + L E +G + + + + +K +P++ P+P
Sbjct: 83 TVTKDRPIIILMDCEVVAL-AEDVGQGLL--KVDESQKKELPTD--PKP----------- 126
Query: 141 GTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPIL 200
STP + T R GS P+ R
Sbjct: 127 -----------------DVSTP-AKTSRVLPQGS----------------PSTR------ 146
Query: 201 KNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRV 260
A + PI+A+NP+Q R I+ RVT KG+++ + A G GK+FSF++LD D GEIRV
Sbjct: 147 -----ANLFPISAVNPFQNRCTIRGRVTNKGEIKTWEKASGKGKLFSFEILD-DSGEIRV 200
Query: 261 TCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDS 320
T FN D+FY+ IE +VY IS K A K + NE+E+ L S V+LCTE D
Sbjct: 201 TGFNEQCDKFYDYIEPKKVYYISGFQCKAANKQWRTTNNEYELTLGKFSNVELCTETCDD 260
Query: 321 IPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK-NGMETQRRILNLKDTSGR 379
+P+Q +SF IS+IE+ + ++DV GI+ + RK +G +R + D S +
Sbjct: 261 LPEQLYSFVAISDIETLPADQMIDVCGILKNAGEPQTFNRKSDGKPLTKRDAFIVDDSRK 320
Query: 380 SVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGTIPSTQLFINPDF 438
V LTLW D +K +D PV+ + ++ F+G SI T + + I+PD
Sbjct: 321 VVTLTLWNDAISK--------IDRTDHPVILISKARITSFNGGLSIATSAGSAVEIDPDI 372
Query: 439 AEAHELREWFDSGGKNA 455
A EL+ W+ G++
Sbjct: 373 DRAKELKTWWAKEGESG 389
>gi|302826559|ref|XP_002994724.1| hypothetical protein SELMODRAFT_432625 [Selaginella moellendorffii]
gi|300137041|gb|EFJ04211.1| hypothetical protein SELMODRAFT_432625 [Selaginella moellendorffii]
Length = 320
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 167/325 (51%), Gaps = 26/325 (8%)
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKD 375
+ED + P+ + I E +S V+V+GIVI + R +G ++R L L D
Sbjct: 7 DEDATFPRIVLAKTSILSACQKERDSFVNVVGIVIWIGTITVTSRDSGAFVKKRTLCLGD 66
Query: 376 TSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFIN 435
SG SV+L LW +EG +QE +D G P++ VK GKV+D++GKS+ I + + I
Sbjct: 67 DSGHSVDLCLWDLKAEEEGSYIQERIDSGVQPIICVKGGKVSDYNGKSLSAIGVSTILIE 126
Query: 436 PDFAEAHELREW----FDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKP 491
P+ +LREW ++ + S SR+ + T+S+I N L E
Sbjct: 127 PEMEAVADLREWMTLYYNVTNFIHLSTSSSRQTVSHTT------TLSEISNMQLKVLESS 180
Query: 492 DWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLL 551
V A + +K+D F Y AC ++ RQC KK T++ + W C CN E +++Y L
Sbjct: 181 PIYRVIATVKEMKTDEFYYNACINVVNARQCGKKTTRTADGWFCSYCNIESANMEFKYAL 240
Query: 552 QAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYE-------LQDDVRFGEIIRSRVF 604
+ I+D + W AFQE+ +EI+G AKEL ++ E L D IRS+++
Sbjct: 241 KMCIEDSSSHVWAIAFQEAAQEIVGMSAKELATMRDENYPAFSLLIDG------IRSKIY 294
Query: 605 NQYLFRLKIKEELYGDEQRVKITVI 629
N F+++ K E Y D ++++ ++
Sbjct: 295 N---FKIRSKLEKYQDMEKLRFYIL 316
>gi|403350046|gb|EJY74468.1| hypothetical protein OXYTRI_04276 [Oxytricha trifallax]
Length = 1442
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 219/452 (48%), Gaps = 42/452 (9%)
Query: 185 PPYQPPPN--FRNHGPILKNEAPARII--PIAALNPYQGRWAIKARVTAKGDLRRYNNAR 240
P Y PN +N N+A ++ PI AL+ + W IKAR+ K + + + N R
Sbjct: 240 PEYTQEPNQAMKNQSS---NQAGDDLVFTPIKALSTFHYDWRIKARIIKKYEKKTWKNQR 296
Query: 241 GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNE 300
+G + + DL+DS G +I+ T F + +F ++I+ G +YL S G +K A + F +KN+
Sbjct: 297 NEGSLMNIDLMDSFGTQIQATFFRDALIKFGDMIKEGHIYLFSNGQVKLANQKFTSIKND 356
Query: 301 WEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILR 360
+ + + + + +D SI + ++F + +I + E + +VD+I ++I+ + +
Sbjct: 357 FCLVFDKQADIKEVP-DDTSINQNGYNFVTVKDILTMEKSKVVDIIAVIINPGNLIELQT 415
Query: 361 KNGMETQRRILNLKDTSGRSVELTLWGDFCNK----EGQKLQEMVDVGFFPVLSVKSGKV 416
K G +R++ + D S SV + W + +K EG V++++ +V
Sbjct: 416 KAGQNKVKRLITIADDSYMSVNVCFWTESASKFDLLEGNH-----------VVALRGVRV 464
Query: 417 NDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKT 476
DF GK + Q+ + D ++L++WF++ N SI++ K +K
Sbjct: 465 VDFQGKQLNFGDDAQMIKDFDHPRTYQLKKWFENLNSNDIIRSINKS-DKESPKKASNKD 523
Query: 477 VSQIKNEGLGR-----------SEKPDWVTVRAFITFIKSDS-FCYTACPLMIGDRQCNK 524
+Q+ E L + ++ + T+ I +I++D Y ACP + CN+
Sbjct: 524 STQLVAELLEQLNLNEPEQNSYAKSNKFFTINCNIAYIRNDDKVLYLACP----EETCNR 579
Query: 525 KVTQSG-NRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELY 583
KV + N ++C+ CN+ D C Y+L ++QDQ+ +V ++E G +I+ A E+
Sbjct: 580 KVIEEQPNVYKCEFCNRTYDRCVPTYMLMVKLQDQSDSIYVNFYRELGSQIMAASANEIK 639
Query: 584 MLKYELQDDVRFGEIIRSRVFNQYLFRLKIKE 615
LK E Q + S+ F Y +K K+
Sbjct: 640 RLKDENQHTQISDQFFDSQ-FKNYQILIKAKQ 670
>gi|403359819|gb|EJY79566.1| hypothetical protein OXYTRI_23155 [Oxytricha trifallax]
Length = 1367
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 219/452 (48%), Gaps = 42/452 (9%)
Query: 185 PPYQPPPN--FRNHGPILKNEAPARII--PIAALNPYQGRWAIKARVTAKGDLRRYNNAR 240
P Y PN +N N+A ++ PI AL+ + W IKAR+ K + + + N R
Sbjct: 240 PEYTQEPNQAMKNQSS---NQAGDDLVFTPIKALSTFHYDWRIKARIIKKYEKKTWKNQR 296
Query: 241 GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNE 300
+G + + DL+DS G +I+ T F + +F ++I+ G +YL S G +K A + F +KN+
Sbjct: 297 NEGSLMNIDLMDSFGTQIQATFFRDALIKFGDMIKEGHIYLFSNGQVKLANQKFTSIKND 356
Query: 301 WEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILR 360
+ + + + + +D SI + ++F + +I + E + +VD+I ++I+ + +
Sbjct: 357 FCLVFDKQADIKEVP-DDTSINQNGYNFVTVKDILTMEKSKVVDIIAVIINPGNLIELQT 415
Query: 361 KNGMETQRRILNLKDTSGRSVELTLWGDFCNK----EGQKLQEMVDVGFFPVLSVKSGKV 416
K G +R++ + D S SV + W + +K EG V++++ +V
Sbjct: 416 KAGQNKVKRLITIADDSYMSVNVCFWTESASKFDLLEGNH-----------VVALRGVRV 464
Query: 417 NDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKT 476
DF GK + Q+ + D ++L++WF++ N SI++ K +K
Sbjct: 465 VDFQGKQLNFGDDAQMIKDFDHPRTYQLKKWFENLNSNDIIRSINKS-DKESPKKASNKD 523
Query: 477 VSQIKNEGLGR-----------SEKPDWVTVRAFITFIKSDS-FCYTACPLMIGDRQCNK 524
+Q+ E L + ++ + T+ I +I++D Y ACP + CN+
Sbjct: 524 STQLVAELLEQLNLNEPEQNSYAKSNKFFTINCNIAYIRNDDKVLYLACP----EETCNR 579
Query: 525 KVTQSG-NRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELY 583
KV + N ++C+ CN+ D C Y+L ++QDQ+ +V ++E G +I+ A E+
Sbjct: 580 KVIEEQPNVYKCEFCNRTYDRCVPTYMLMVKLQDQSDSIYVNFYRELGSQIMAASANEIK 639
Query: 584 MLKYELQDDVRFGEIIRSRVFNQYLFRLKIKE 615
LK E Q + S+ F Y +K K+
Sbjct: 640 RLKDENQHTQISDQFFDSQ-FKNYQILIKAKQ 670
>gi|294875666|ref|XP_002767426.1| replication factor a 1, rfa1, putative [Perkinsus marinus ATCC
50983]
gi|239868993|gb|EER00144.1| replication factor a 1, rfa1, putative [Perkinsus marinus ATCC
50983]
Length = 582
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 153/269 (56%), Gaps = 12/269 (4%)
Query: 197 GPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGG 256
GP+ + IIPI+ L+ Y +W IK RV++K D+R + NARG+G++FS +L+D G
Sbjct: 306 GPVSYRPVASDIIPISQLSVYSQKWTIKGRVSSKSDVRTFVNARGEGQLFSIELVDDQNG 365
Query: 257 EIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE 316
EIR T FN+ V +FY I+ GRVY SKG +K A FN +E+ + ++ +
Sbjct: 366 EIRATFFNSAVTKFYPAIQQGRVYTFSKGQVKQANARFN-PGAAYELTFNDDAIIEEAND 424
Query: 317 EDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNP-SVPILRKNGMETQRRILNLKD 375
D IP+ + I+ I+ + VD+ GI+ P S ++R G E RR + D
Sbjct: 425 SAD-IPRILYKISKIATIQDRNADEFVDLCGIITHCAPISTIVVRNTGQERARRNFTIVD 483
Query: 376 TSGRSVELTLWGDF---CNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQL 432
SG S+E+T+WG+ C + ++Q + PV+ +K+ +++++ GKS+ T +T L
Sbjct: 484 DSGCSIEMTVWGETAQNCGVDENRVQ------YHPVVMIKNARISNYGGKSLTTASTTTL 537
Query: 433 FINPDFAEAHELREWFDSGGKNAATVSIS 461
++PD + A E++ W+ GG+ A ++S
Sbjct: 538 EVDPDDSRAFEVKNWWLQGGQTGAVQALS 566
>gi|294875668|ref|XP_002767427.1| replication factor a 1, rfa1, putative [Perkinsus marinus ATCC
50983]
gi|239868994|gb|EER00145.1| replication factor a 1, rfa1, putative [Perkinsus marinus ATCC
50983]
Length = 577
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 153/269 (56%), Gaps = 12/269 (4%)
Query: 197 GPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGG 256
GP+ + IIPI+ L+ Y +W IK RV++K D+R + NARG+G++FS +L+D G
Sbjct: 301 GPVSYRPVASDIIPISQLSVYSQKWTIKGRVSSKSDVRTFVNARGEGQLFSIELVDDQNG 360
Query: 257 EIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE 316
EIR T FN+ V +FY I+ GRVY SKG +K A FN +E+ + ++ +
Sbjct: 361 EIRATFFNSAVTKFYPAIQQGRVYTFSKGQVKQANARFN-PGAAYELTFNDDAIIEEAND 419
Query: 317 EDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNP-SVPILRKNGMETQRRILNLKD 375
D IP+ + I+ I+ + VD+ GI+ P S ++R G E RR + D
Sbjct: 420 SAD-IPRILYKISKIATIQDRNADEFVDLCGIITHCAPISTIVVRNTGQERARRNFTIVD 478
Query: 376 TSGRSVELTLWGDF---CNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQL 432
SG S+E+T+WG+ C + ++Q + PV+ +K+ +++++ GKS+ T +T L
Sbjct: 479 DSGCSIEMTVWGETAQNCGVDENRVQ------YHPVVMIKNARISNYGGKSLTTASTTTL 532
Query: 433 FINPDFAEAHELREWFDSGGKNAATVSIS 461
++PD + A E++ W+ GG+ A ++S
Sbjct: 533 EVDPDDSRAFEVKNWWLQGGQTGAVQALS 561
>gi|340378782|ref|XP_003387906.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Amphimedon queenslandica]
Length = 256
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 139/251 (55%), Gaps = 8/251 (3%)
Query: 399 EMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATV 458
E D FPV+++KS +++DF+G S+ + S+ + NPD EAH+L+ W+D GK+
Sbjct: 7 EEFDGSMFPVVALKSVRLSDFNGVSLSALASSTILTNPDLPEAHQLKGWYDHHGKDQDVT 66
Query: 459 SISREIAAGGAKNEIHKTVSQIKN-EGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMI 517
S+S A G + T QIK LG+ EKPD+ + + I ++K ++ YTACP
Sbjct: 67 SLSSRNATGSFSDSAFLTFRQIKELNQLGQQEKPDYFSCKGMIVYLKKENCLYTACP--- 123
Query: 518 GDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILG 576
+ CNKKV G + C++C + YR +++ D W+ F E G I+G
Sbjct: 124 -SQDCNKKVNDDGTGNYFCEKCGKSYPSFKYRMIMKLNCVDYLDNCWLDTFHEGGSAIVG 182
Query: 577 CPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNY 636
++L L+ QD +F I++ F +++FR++ K + Y DEQR++ + + VNY
Sbjct: 183 MDGQKLGELRE--QDAAQFDNIMQEAYFKEFIFRVRAKVDTYNDEQRLRCSCVSVQPVNY 240
Query: 637 SSESRYLLDLI 647
++E++ L+ +I
Sbjct: 241 ATETKRLIKMI 251
>gi|340386214|ref|XP_003391603.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Amphimedon queenslandica]
Length = 251
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 140/253 (55%), Gaps = 8/253 (3%)
Query: 399 EMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATV 458
E D FPV+++KS +++DF+G S+ + S+ + NPD EAH+L+ W+D GK+
Sbjct: 2 EEFDGSMFPVVALKSVRLSDFNGVSLSALASSTILTNPDLPEAHQLKGWYDHHGKDQDVT 61
Query: 459 SISREIAAGGAKNEIHKTVSQIKN-EGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMI 517
S+S A G + T QIK LG+ EKPD+ + + I ++K ++ YTACP
Sbjct: 62 SLSSRNATGSFSDSAFLTFRQIKELNQLGQQEKPDYFSCKGMIVYLKKENCLYTACP--- 118
Query: 518 GDRQCNKKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILG 576
+ CNKKV G + C++C + YR +++ D W+ F E G I+G
Sbjct: 119 -SQDCNKKVNDDGTGNYFCEKCGKSYPSFKYRVIMKLNCVDYLDNCWLDTFHEGGSAIVG 177
Query: 577 CPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNY 636
++L L+ QD +F I++ F +++FR++ K + Y DEQR++ + + VNY
Sbjct: 178 MDGQKLGELRE--QDAAQFDNIMQEAYFKEFIFRVRAKVDTYNDEQRLRCSCVTVQPVNY 235
Query: 637 SSESRYLLDLISK 649
++E++ L+ +I +
Sbjct: 236 ATETKRLIKMIKE 248
>gi|355704842|gb|EHH30767.1| hypothetical protein EGK_20543 [Macaca mulatta]
Length = 267
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 153/278 (55%), Gaps = 17/278 (6%)
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
DTS + V TLWG+ +K Q PVL++K +V+DF G+S+ + S+ +
Sbjct: 2 DTSRKVVTATLWGEDADKFDGSRQ--------PVLAIKGARVSDFGGRSLSVLSSSTIIA 53
Query: 435 NPDFAEAHELREWFDSG-GKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDW 493
NPD EA++LR WFD+G + ++S + + GG N KT+ ++K E LG+S KPD+
Sbjct: 54 NPDIPEAYKLRGWFDAGQALDGVSISDLKSGSVGGG-NTNWKTLYEVKFENLGQSNKPDY 112
Query: 494 VTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQ 552
+ A + +++ ++ Y ACP + CNKKV Q ++C++C+ E Y +L
Sbjct: 113 FSSVATVVYLRKENCMYQACPT----QDCNKKVIDQQNGLYRCEKCDTEFPNFKYHMILS 168
Query: 553 AQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLK 612
I D WVT FQES E ILG A L LK +++ F E+ ++ F ++FR++
Sbjct: 169 VNIADFQENQWVTCFQESAEAILGQNAAYLGDLK--DKNEQAFEEVFQNANFRSFIFRVR 226
Query: 613 IKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
+K E Y +E R+K TV+ V+Y R L+ I +S
Sbjct: 227 VKVETYNEESRIKATVMDVKPVDYREYGRRLVLSIRRS 264
>gi|302841268|ref|XP_002952179.1| hypothetical protein VOLCADRAFT_105399 [Volvox carteri f.
nagariensis]
gi|300262444|gb|EFJ46650.1| hypothetical protein VOLCADRAFT_105399 [Volvox carteri f.
nagariensis]
Length = 499
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 218/464 (46%), Gaps = 47/464 (10%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
IA L+PY W IKA+V K LR + D K+ + DL+D G I+ T + A +RF
Sbjct: 55 IAQLHPYDSNWCIKAKVELKAPLRSMSIRGSDVKILTVDLVDDTGQMIQGTFWRAPAERF 114
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI-FLEATSTVDLCTEEDDSIPKQQFSFR 329
E + G+VY+ + +KPA K ++ +K +++I F E T TE D +
Sbjct: 115 SESLMEGKVYVFHRFKVKPADKKYSSVKADYQIDFTERTE----VTEAADQDTSSMTAAV 170
Query: 330 HISEIE----SAENNSIVDVIGIVISVNPSVPILRK-NGMETQRRILNLKDTSGRSVELT 384
I+ IE VDV+G+V+++ P + RK + E RR + L D S +SV LT
Sbjct: 171 EITPIEVLPRRVGGRMPVDVMGVVLALGPLGTVKRKADSSELPRRDITLGDMSCKSVVLT 230
Query: 385 LWGD----FCNK-EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFA 439
LWGD F + EGQ+ + V+ V +V DF+G S+ ++ + + +NP+ +
Sbjct: 231 LWGDNASAFAGQLEGQEGKV--------VMQVTHVRVTDFNGCSVSSLTKSVVSLNPEGS 282
Query: 440 EAHELREWFDSGGKN-----------AATVSISREIAAGGAKNEIH--KTVSQIKNEGLG 486
A +L W+ + G T ++S A ++ K V+ I + L
Sbjct: 283 GAAQLLTWYSTAGMVPDRFTPVGQDLPGTRAVSNGSGAVPSRERFFTVKDVAGISADSL- 341
Query: 487 RSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDEC 545
+ +K + V A+I + S+ Y A P K V Q G RW + + ++
Sbjct: 342 QDDKATFQAVTAYIAMVNSELQMYYLANP-----ENGRKVVDQGGGRW-AEADGRVVERP 395
Query: 546 DYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFN 605
++RY+L ++ D TG V F + E ++G A EL LK + F +R+ +
Sbjct: 396 EHRYVLSVKLADHTGEAVVQLFNKEAEAVMGIKADELAALKEAGEG---FEAALRAAQWR 452
Query: 606 QYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+ + K Y E+RV+ T R D +++ SE + L LI K
Sbjct: 453 PWSVVVMSKAREYNGERRVRHTAHRVDTLDWVSEGQRLAMLIGK 496
>gi|307193861|gb|EFN76495.1| Replication protein A 70 kDa DNA-binding subunit [Harpegnathos
saltator]
Length = 489
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 136/458 (29%), Positives = 218/458 (47%), Gaps = 48/458 (10%)
Query: 200 LKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIR 259
L N A ++ + + AIKARVT K ++ + N +G K+FS L D + EI+
Sbjct: 68 LTNYAVFKVSDYKVSSTIDEKQAIKARVTNKSSIKEWKNKKG--KLFSMHLHD-NSDEIK 124
Query: 260 VTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD 319
FN D+ Y +E +VY IS LK + + +N LKN++EI + + + + +D
Sbjct: 125 CVAFN---DKLYNNVENNKVYHISNYELKDSDRRYNKLKNQYEIIITDDTRIKE-SHDDA 180
Query: 320 SIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTS-- 377
IP F F IS++E+ + +DV+G+V+ N + K E +R +++ D S
Sbjct: 181 DIPSIHFDFCPISQVENKQIYDTIDVLGVVVKSN--LKTFTKQSNENFKRDIDIVDNSQP 238
Query: 378 -GRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTI----PSTQL 432
G + +TLWG Q+ QE D +L++K +V++F+GK + I ST +
Sbjct: 239 SGARICVTLWG-------QQAQEF-DCNNGTILAIKGARVDEFNGKRLTIINSPERSTII 290
Query: 433 FINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPD 492
+PD EA L EW+ S N +T+ ++ LG + +
Sbjct: 291 RKDPDLPEARVLLEWYRS---------------YWSKFNCTFRTIRELTEATLGIT--SN 333
Query: 493 WVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYRYLL 551
+ V A I I ++ Y ACP C KK+T+ + +++CD C ++ Y LL
Sbjct: 334 FFKVMAIIDSIHIENCIYKACP----KDNCKKKLTELAFEKYRCDSCKRDYLNFKYCLLL 389
Query: 552 QAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRL 611
I D TG VTAF E E+IL A+EL LK D+ + I V +Y F L
Sbjct: 390 NMIISDITGNHRVTAFDEVAEKILEISAQELVRLKE--NDNNAYIRKIDEAVLKRYTFYL 447
Query: 612 KIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
K E++ ++R K T I + +N+ Y L I++
Sbjct: 448 KGIAEVFHGQRRPKYTCISIEPLNHHIYLMYFLQKINE 485
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 12 LINGGDVNSKPLVQVMDI-KLIGSTQERYRFLISDSVS-TQHAMLATQLNDRVKTGQVKK 69
++NG ++ +P++Q++ KL G+T + YR ++SD + Q+AML+T+LN + G +
Sbjct: 12 IMNGRNI-KEPILQLLSYRKLPGATFDWYRLVVSDGLRINQYAMLSTELNRLFENGTLTN 70
Query: 70 GSVVQLIDY-ICSTVQNRKII 89
+V ++ DY + ST+ ++ I
Sbjct: 71 YAVFKVSDYKVSSTIDEKQAI 91
>gi|290982322|ref|XP_002673879.1| replication protein A1, 70 kDa-like protein [Naegleria gruberi]
gi|284087466|gb|EFC41135.1| replication protein A1, 70 kDa-like protein [Naegleria gruberi]
Length = 691
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 149/570 (26%), Positives = 260/570 (45%), Gaps = 66/570 (11%)
Query: 107 PKIFSESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGT 166
P FS + + T+ NN PQ V NN PN TFN P +T ++
Sbjct: 160 PPSFSVNNSHSNNTV--NNQPQQVNRNNQPQPN----------TFNRPQPQQTATNSNPV 207
Query: 167 FRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKAR 226
+ + R PT P Q + N GP+ +I+P+ + P+ W IK R
Sbjct: 208 QQRNQQQTFNRPSNPTNNAPRQ---SVGNVGPL----KTKQILPLVGITPWVSDWVIKVR 260
Query: 227 VTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGS 286
VT KG+L++++N +G +FS +L+D DG EIR T F ++FY+ I+ +VY + G
Sbjct: 261 VTKKGELKKWSNPTKEGHLFSLELIDEDGVEIRATFF---TNKFYDHIKESKVYFMKGGK 317
Query: 287 LKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD---SIPKQQFSFRHISEIESAENNSIV 343
K A K ++ L + +E+ S ++ EDD +IP+ F F ++++ E + V
Sbjct: 318 AKSADKKYSRLPHSYELTFYDNSVIEEA--EDDQAKNIPQGHFEFIPFEQLKTIEKKNGV 375
Query: 344 DVIGIVISVNPSVPILRK-----NGMETQ----RRILNLKDTSGRSVE--LTLWGDFCNK 392
D++G+V S+ S + K N +E Q IL KD G E +TLWG
Sbjct: 376 DIVGVVKSIGNSEQMTIKSKQDPNAIEKQTTKRELILINKDNDGNIYEAAITLWG----- 430
Query: 393 EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWF---D 449
E + D F L++K K G + T ST++ N D E+ + E F +
Sbjct: 431 EDNISFNIGDTVIFTALTIKEFK----GGVKLSTSKSTKILTNFDLPESRRVMEQFANLE 486
Query: 450 SGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSE-KPDWVTVRAFITFIKSDSF 508
+ + V +S ++G K + + ++ + L + + K +R+ + K +
Sbjct: 487 TPIEEIKGVLLSAIESSGSFKKYSLEDLDTVRVQDLEQEKFKSKTFFIRSHFSLFKDGNL 546
Query: 509 CYTACPLMIGDRQCNKKVTQS--GNRWQCDRCNQEIDE--CDYRYLLQAQIQDQTGLTWV 564
Y AC + + +KK+ + N + C CN + DE ++Y+ + D T +
Sbjct: 547 TYCAC---VNEECKSKKLKRDEMDNSYTCPLCNTKYDETTAAHKYMTSVVLGDHTCTKTL 603
Query: 565 TAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQ-- 622
TAF + +LG PA + Y L +D+ + I +S++ Y+ R ++ +EQ
Sbjct: 604 TAFDKGMTLLLGVPAGDFYALDDRTKDE--YKSIAQSKIAT-YMVRAGVQN---NNEQGP 657
Query: 623 RVKITVIRADQVNYSSESRYLLDLISKSFR 652
+V+ + + + ++ E++ L I+ R
Sbjct: 658 QVRFSFVGLKEPEWAKEAKGCLGTINAYCR 687
>gi|413944587|gb|AFW77236.1| hypothetical protein ZEAMMB73_509278 [Zea mays]
Length = 464
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 116/342 (33%), Positives = 174/342 (50%), Gaps = 42/342 (12%)
Query: 339 NNSIVDVIGIVISVNPSVPILRKN--------------GMETQ-RRILNLKDTSGRSVEL 383
N +I + +S+NP P R GM T RR ++ + R + +
Sbjct: 130 NEAIERAWHMKMSMNPDEPKTRARTDFLLNNEHGSRSFGMRTSVRRKIDNETILKRDIVV 189
Query: 384 TLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHE 443
D + GQ+L +MVD PV+++KS KV DF G S+ TI + L INPD EA
Sbjct: 190 ADVNDLATRAGQELLDMVDSS--PVVAIKSLKVFDFQGMSLSTIDRSTLEINPDLPEAKN 247
Query: 444 LREWFDSGGKNAATVSISREIA---AGGAKNEIHKTV--SQI-KNEGLGRSEKPDWVTVR 497
L W+DS GK+ + V IS E AGG K+ V S I N +G+ EKP + ++
Sbjct: 248 LMSWYDSEGKDTSLVPISAEAGATRAGGFKSMYFDRVFLSYITSNPSMGQ-EKPVFFSLY 306
Query: 498 AFITFIKSDS-FCYTACPLMIGDRQCNKKVTQ---SGNRWQCDRCNQEIDECDYRYLLQA 553
A I+ IK D Y AC CNKKVT+ SG + C+ C + EC RY++
Sbjct: 307 AIISHIKPDQIMWYRAC------MTCNKKVTEVFRSG--YWCEGCQKNDSECSLRYIMVI 358
Query: 554 QIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYEL------QDDVRFGEIIRSRVFNQY 607
++ D T WV+ F E E+I+GC A EL ++ E Q D + ++ + +
Sbjct: 359 KVSDPTSEAWVSVFNEHAEKIIGCNADELDRIRKEWARHRLQQGDDIYVLKLKEATWVPH 418
Query: 608 LFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
LFR+ + + Y +E+R +ITV V+Y++ES+YL++ I+K
Sbjct: 419 LFRVSVTQHEYMNEKRQRITVRGEAPVDYAAESKYLVEEIAK 460
>gi|156088471|ref|XP_001611642.1| hypothetical protein [Babesia bovis T2Bo]
gi|154798896|gb|EDO08074.1| conserved hypothetical protein [Babesia bovis]
Length = 462
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 214/456 (46%), Gaps = 37/456 (8%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
PI + Y W IKARV K LR +GD + D++D G IRV + +
Sbjct: 6 PIKNITTYTNNWTIKARVLDKAPLRA---IKGDNHIMHVDVVDKHGDTIRVKFWGKAATK 62
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFR 329
+ E++E G+VYL SKG+++ + K FN +++EI S +D +E D ++
Sbjct: 63 WDEVLEKGKVYLFSKGNVELSNKKFNTTPHKYEITCHQDSQIDPVDDEGDIKMQRDHKLL 122
Query: 330 HISEIESAE--NNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
+ +I+S + VD++ I +V+P+V I + G E +RIL++ D +G ++L LWG
Sbjct: 123 TLRDIKSMPQVTQAPVDLLCIANTVHPAVNITTRAGKELPKRILSIVDNTGYEMDLVLWG 182
Query: 388 DFCNKEGQKLQEMVDVGFFPV-LSVKS--GKVNDFSGKSIGTIPSTQLFINPDFAEAHEL 444
D N +G +++M L+VK G + S ++ +TQ I D + +L
Sbjct: 183 DHANMDG--IEQMEGKAIIATKLAVKEWQGSRSCQSSQNSDVTLATQENI-KDQDKLTQL 239
Query: 445 REWFDSGGKNAATVSISREIAAGGAKNEIHKT-----VSQIKNEGLGRSE--KPDWVTVR 497
WF++ N T S + A AK+ +T +++ K + R++ K W
Sbjct: 240 ESWFENAKANNETFK-SLKTQAQAAKDNYEETDIANLLTKTKGSFILRAKLRKIHWKNKE 298
Query: 498 AFITFIKSDSFCYTACPLMIGDRQCNKKVT--QSGNRWQCDRCNQEIDECDYRYLLQAQI 555
+ Y ACP+ C+KKV + NR++C C+ E RY+
Sbjct: 299 GSV------RMWYQACPM------CSKKVVMDEDTNRYKCIACSDISVEPVPRYIFSCNF 346
Query: 556 QDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKE 615
D TG E+GE++LG AKEL + + RF E +Y ++
Sbjct: 347 MDATGKINAQITAENGEKLLGKSAKELENMDPDTLK--RFCEF--DATLGEYKLSGYVRS 402
Query: 616 ELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSF 651
+Y E R + T+ R + +NY +E+ ++LD + ++
Sbjct: 403 NMYNGETRYQFTITRVEDMNYPAETAHMLDKMQITY 438
>gi|395840382|ref|XP_003793039.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Otolemur garnettii]
Length = 475
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 196/363 (53%), Gaps = 47/363 (12%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD + KP++QV++++ I G++ RYR L+SD ++T + MLATQLN V+ ++
Sbjct: 12 AIMQQGDTSIKPILQVINVRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEQERL 71
Query: 68 KKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCEP----IGNPKIFSESELTAQKTIP 122
+ Q+ +I +T+++ R++++++ +E ++ E IGNP ++E Q+ +P
Sbjct: 72 SSNCICQINQFIVNTLKDGRRVVILMELE-VLKSAEAVGLKIGNPVPYNEGH-GQQQVVP 129
Query: 123 SNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPT 182
S P ++P++ QN G+ + S S S TF P S+
Sbjct: 130 S-----PATA---ASPSTSRPQPQN-GSLGMGSAVSKSFGASKTFGKPGGMSL------- 173
Query: 183 VQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGD 242
P A+++PIA+L PYQ +W I ARVT K +R ++N+RG+
Sbjct: 174 ---------------PNTSGGTQAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGE 218
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE 302
GK+FS +L+D GEIR T FN VD+F+ +IEV +VY +KG+LK A K F+ +KN++E
Sbjct: 219 GKLFSVELVDQS-GEIRATAFNDQVDKFFPLIEVNKVYYFTKGTLKIANKQFSAVKNDYE 277
Query: 303 I-FLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK 361
+ F T DL + + +++ ++E++S EN D SV V + ++
Sbjct: 278 MTFSNDTXXSDL---KSGGVGGSNTNWKTLNEVKS-ENLGQGDKADYFSSVATVVYLRKE 333
Query: 362 NGM 364
N M
Sbjct: 334 NSM 336
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 100/184 (54%), Gaps = 7/184 (3%)
Query: 468 GAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT 527
G N KT++++K+E LG+ +K D+ + A + +++ ++ Y A P + CNKKV
Sbjct: 295 GGSNTNWKTLNEVKSENLGQGDKADYFSSVATVVYLRKENSMYQAYP----TQDCNKKVI 350
Query: 528 -QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLK 586
Q ++C++C+ E YR +L I D WVT FQES E ILG Y+ +
Sbjct: 351 DQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQDNQWVTCFQESAEAILG--QNTAYLGE 408
Query: 587 YELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDL 646
+ +++ F E+ ++ F + FR+++K E Y DE R+K TV+ V+Y R L+
Sbjct: 409 LKEKNEQAFEEVFQNANFRSFTFRIRVKLENYNDESRIKATVMDVKPVDYREYGRRLITN 468
Query: 647 ISKS 650
I ++
Sbjct: 469 IRRN 472
>gi|302755672|ref|XP_002961260.1| hypothetical protein SELMODRAFT_403000 [Selaginella moellendorffii]
gi|300172199|gb|EFJ38799.1| hypothetical protein SELMODRAFT_403000 [Selaginella moellendorffii]
Length = 326
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 173/331 (52%), Gaps = 19/331 (5%)
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKD 375
+ED + P+ + I E +S VDV+GI+I + R +G ++R L L D
Sbjct: 7 DEDATFPRIVLAKTSILSACQKERDSFVDVVGIIIWIGTITVTSRDSGTFVKKRTLCLGD 66
Query: 376 TSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFIN 435
SG SV+L LW +EG +QE +D G P++ VK GKV+D++GKS+ I + + I
Sbjct: 67 DSGHSVDLCLWDLKAEEEGSYIQEQIDSGVQPIICVKGGKVSDYNGKSLSAIGVSTILIE 126
Query: 436 PDFAEAHELREW----FDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKP 491
P+ +LREW ++ + S SR+ + T+S+I N L E
Sbjct: 127 PEMEAVADLREWMTLYYNVTNFIHLSTSSSRQTVSCTT------TLSEISNMQLKVLESS 180
Query: 492 DWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLL 551
V A + +K+D F Y AC ++ RQC KK T++ + W C+ CN E +++Y L
Sbjct: 181 PIYRVIATVKEMKTDEFYYNACINVVNARQCGKKTTRTADGWLCNYCNFESANMEFKYAL 240
Query: 552 QAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEI---IRSRVFNQYL 608
+ I+D + W AFQE+ +EI+G KEL ++ E + F + IRS++ Y
Sbjct: 241 KMCIEDSSSHVWAIAFQEAAQEIVGMSTKELATMRDE--NYPAFSLLIDGIRSKI---YK 295
Query: 609 FRLKIKEELYGDEQRVK-ITVIRADQVNYSS 638
F+++ K E Y D +++ + + + +++ ++S
Sbjct: 296 FKIRSKLEKYQDMEKLSYMELAKTNKIKHTS 326
>gi|302825229|ref|XP_002994245.1| hypothetical protein SELMODRAFT_432174 [Selaginella moellendorffii]
gi|300137892|gb|EFJ04690.1| hypothetical protein SELMODRAFT_432174 [Selaginella moellendorffii]
Length = 982
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 162/336 (48%), Gaps = 33/336 (9%)
Query: 246 FSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLIS-KGSLKPAQKNFNHLKNEWEIF 304
SFD++D G EIR+ + + I G VY S G ++ + + + + WEI
Sbjct: 1 MSFDVVDVQGTEIRIIGSDDCALVLSDKIVQGTVYSFSGSGGIRRSNQAYTPFEATWEI- 59
Query: 305 LEATSTVDLCT-EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNG 363
+A ++ +ED + P+ + I E +S VDV+GIVI + R +G
Sbjct: 60 -QANKGMEFTALDEDATFPRIVLAKTSILSACQKERDSFVDVVGIVIWIGTITVTSRDSG 118
Query: 364 METQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS 423
++R L L D SG SV+L LW +EG +QE +D G P++ VK GKV+D++GKS
Sbjct: 119 TFVKKRTLCLGDDSGHSVDLCLWDLKAEEEGSYIQERIDSGVQPIICVKGGKVSDYNGKS 178
Query: 424 IGTIPSTQLFINPDFAEAHELREW----FDSGGKNAATVSISREIAAGGAKNEIHKTVSQ 479
+ I + + I P+ +LREW ++ + S SR+ + T+S+
Sbjct: 179 LSAIGVSTILIEPEMEAVADLREWMTLYYNVTNFIHLSTSSSRQTVS------CTTTLSE 232
Query: 480 IKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCN 539
I N L SF Y AC ++ RQC KK T++ + W C+ CN
Sbjct: 233 ISNMQLKM-------------------SFYYNACINVVNARQCGKKTTRTADGWFCNYCN 273
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEIL 575
E +++Y L+ I+D + W AFQE+ +EI+
Sbjct: 274 FESANMEFKYALKMCIEDSSSHVWAIAFQEATQEIV 309
>gi|282931288|gb|ADB03555.1| replication protein complex A largest subunit [Tetrahymena
thermophila]
Length = 609
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 210/442 (47%), Gaps = 49/442 (11%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
I L P IK R+T KGDL+ + +G K+FS D++D G E ++ FN + +++
Sbjct: 168 IRNLQPNGQPQTIKVRITKKGDLKSFKEKQG--KLFSIDVIDKFGDECSISFFNEIAEQY 225
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRH 330
+ +VG+V ++ + S+K N + K + + + S + +C +ED SIP + + +
Sbjct: 226 DGLFKVGQVIVLKQFSVK-VNNNHQYNKGDHTVTVNKESKILIC-QEDPSIPMIKLNRQF 283
Query: 331 ISEIESAENNSIVDVIGIVISVNPSVP--ILRKNGMETQRRILNLKDTSGRSVELTLWG- 387
I ++++ + ++D+I +V+ + V IL+K+ + +R + D S E+TLWG
Sbjct: 284 IQDMQNKQKGDLIDLI-VVVKADTEVKTMILKKDNQQQSKRDIISFDESLIETEITLWGE 342
Query: 388 ---DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS-IGTIPSTQLFINPD---FAE 440
D+ K+G ++ K K+ +F K I TQ+F+NPD F +
Sbjct: 343 TAKDYDAKQGD------------IIVFKDAKIGEFKDKKQINIGYGTQIFMNPDEQLFPQ 390
Query: 441 AHELREWFDSGGKNAATVSISREIAAGGAKNEI---HKTVSQIKNEGLGRSEKPD---WV 494
H++++W+ S + + +I + E+ +++ +K E P+ W
Sbjct: 391 IHDVKKWYLSLNSDQLS-TIQKAQGNDTGPREVTSFESSLNILKEEIKNLQTDPEMKIWK 449
Query: 495 TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQ 554
+R I +IK Y AC C KK+ ++ W C CN++ +E D RY+L
Sbjct: 450 EIRGQIMYIKDTPLYYNAC------FSCKKKIARNNEVWTCINCNKDFNEPDSRYILSLN 503
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVF-----NQYLF 609
I D T WV+AF E G++ILG + +Y +D G + ++ +Y F
Sbjct: 504 ISDSTDTIWVSAFDEVGQKILGVKGD---VFRY-ADEDTEHGTETKKKLLMAAQNKEYRF 559
Query: 610 RLKIKEELYGDEQRVKITVIRA 631
L K+E + TVI A
Sbjct: 560 LLLTKQERDQNGNARDKTVIHA 581
>gi|146163802|ref|XP_001012333.2| hypothetical protein TTHERM_00106890 [Tetrahymena thermophila]
gi|146145960|gb|EAR92088.2| hypothetical protein TTHERM_00106890 [Tetrahymena thermophila
SB210]
Length = 671
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 210/442 (47%), Gaps = 49/442 (11%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
I L P IK R+T KGDL+ + +G K+FS D++D G E ++ FN + +++
Sbjct: 230 IRNLQPNGQPQTIKVRITKKGDLKSFKEKQG--KLFSIDVIDKFGDECSISFFNEIAEQY 287
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRH 330
+ +VG+V ++ + S+K N + K + + + S + +C +ED SIP + + +
Sbjct: 288 DGLFKVGQVIVLKQFSVK-VNNNHQYNKGDHTVTVNKESKILIC-QEDPSIPMIKLNRQF 345
Query: 331 ISEIESAENNSIVDVIGIVISVNPSVP--ILRKNGMETQRRILNLKDTSGRSVELTLWG- 387
I ++++ + ++D+I +V+ + V IL+K+ + +R + D S E+TLWG
Sbjct: 346 IQDMQNKQKGDLIDLI-VVVKADTEVKTMILKKDNQQQSKRDIISFDESLIETEITLWGE 404
Query: 388 ---DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS-IGTIPSTQLFINPD---FAE 440
D+ K+G ++ K K+ +F K I TQ+F+NPD F +
Sbjct: 405 TAKDYDAKQGD------------IIVFKDAKIGEFKDKKQINIGYGTQIFMNPDEQLFPQ 452
Query: 441 AHELREWFDSGGKNAATVSISREIAAGGAKNEI---HKTVSQIKNEGLGRSEKPD---WV 494
H++++W+ S + + +I + E+ +++ +K E P+ W
Sbjct: 453 IHDVKKWYLSLNSDQLS-TIQKAQGNDTGPREVTSFESSLNILKEEIKNLQTDPEMKIWK 511
Query: 495 TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQ 554
+R I +IK Y AC C KK+ ++ W C CN++ +E D RY+L
Sbjct: 512 EIRGQIMYIKDTPLYYNAC------FSCKKKIARNNEVWTCINCNKDFNEPDSRYILSLN 565
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVF-----NQYLF 609
I D T WV+AF E G++ILG + +Y +D G + ++ +Y F
Sbjct: 566 ISDSTDTIWVSAFDEVGQKILGVKGD---VFRY-ADEDTEHGTETKKKLLMAAQNKEYRF 621
Query: 610 RLKIKEELYGDEQRVKITVIRA 631
L K+E + TVI A
Sbjct: 622 LLLTKQERDQNGNARDKTVIHA 643
>gi|324505539|gb|ADY42379.1| Replication factor A 73 kDa subunit [Ascaris suum]
Length = 620
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 189/406 (46%), Gaps = 29/406 (7%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I PI L PY W + +V ++R++ RG +FSF +D DG EIR+ FN +
Sbjct: 179 ITPIKLLTPYCKNWRLCIKVVCIEEMRQF---RGTS-LFSFSGVDDDGVEIRICAFNHLA 234
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD-SIPKQQF 326
++ ++++ ++Y I + S+KP K F + + E+ + + + C + + S PK +
Sbjct: 235 EKVAALVKLDQMYYIRRASVKPTTKRFKRNQYDMEVIIRDETEIIECIDRAEISSPKIRC 294
Query: 327 SFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLW 386
F I + N+ VD++G+V V + K G +R + + D S RSV TLW
Sbjct: 295 DFIRIRNLPKFANSE-VDMMGVVREVGDVKQLTGKMGEALVKRDIQIVDDSLRSVIATLW 353
Query: 387 GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGTIPSTQLFINPDFAEAHELR 445
G+ + DV +L K V + G S+ T ST + +N D E LR
Sbjct: 354 GE----RAKNFDASSDV---TILVFKRALVRTYHGSISLSTTGSTIVDVNADLPEVKALR 406
Query: 446 EWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKS 505
W++ G +NA+ ++S E+ ++ HK + ++K K + V A I I
Sbjct: 407 RWYE-GNRNASFAALSTELIFSSSE---HKWIGEVKVLN-----KMIYFNVTAMIMNINV 457
Query: 506 DSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVT 565
D+ Y C + C KK+ + C +C D+ Y Y L ++ D TG WV+
Sbjct: 458 DNAVYKGCV----NEGCRKKLLEVDGTLHCPKCGNASDDYKYFYTLSMELCDMTGTHWVS 513
Query: 566 AFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRL 611
F +S E+++G A E+ + D + R+ +F Y FR+
Sbjct: 514 VFDDSAEKLMGESADEIAKTRSFNYDT--YCAHFRALLFKTYAFRV 557
>gi|340059107|emb|CCC53482.1| putative replication factor A, 51kDa subunit, fragment, partial
[Trypanosoma vivax Y486]
Length = 317
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/316 (34%), Positives = 177/316 (56%), Gaps = 22/316 (6%)
Query: 210 PIAALNPYQG-RWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
PI +L P+ G +W I+ARVT K D+RR+N GK+FSF L+D + IR T FN VD
Sbjct: 11 PIDSLTPFLGSKWWIRARVTDKSDVRRWNKPTSQGKLFSFTLID-ESASIRATVFNDAVD 69
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDS-IPKQQFS 327
F +I G+VY + G +K A + F+++ N++E+ ++TS + + + S +P Q+++
Sbjct: 70 IFDPLIVNGQVYYLGGGQVKNANRKFSNVNNDYEVTFDSTSQISIAQDSGSSLLPMQRYN 129
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSGRSVELTLW 386
F I ++ E S+VDV+ +V SV+ I +K+ G E +R + + D++ SV++TLW
Sbjct: 130 FVPIGILKKREVGSLVDVLVVVHSVDDLTTITQKSTGRELVKRNVRVCDSTA-SVDVTLW 188
Query: 387 GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELRE 446
N E + G VL+++ KV +F G S+ + + +NP+ A+ +L E
Sbjct: 189 ----NDEARNWT----FGQGTVLAIRQLKVGNFDGVSLSSTSQSSFDVNPNIADTKKLAE 240
Query: 447 WF-DSGGKNAATVSISREIAAGGAKNEI-------HKTVSQIKNEGLGRSEKPDWVTVRA 498
W+ +GG++ ++S S AAGG +K I EGLGR +PD+V VR
Sbjct: 241 WYISTGGRDVVSLS-SLTSAAGGVGGSTLGEGYRGYKYFDDIAVEGLGRGPRPDYVDVRC 299
Query: 499 FITFIKSDSFCYTACP 514
++K DS Y ACP
Sbjct: 300 TPVYLKQDSQWYDACP 315
>gi|308813768|ref|XP_003084190.1| replication protein, putative (ISS) [Ostreococcus tauri]
gi|116056073|emb|CAL58606.1| replication protein, putative (ISS) [Ostreococcus tauri]
Length = 566
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 219/449 (48%), Gaps = 35/449 (7%)
Query: 209 IPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
+P++ALNPY+ + G +R AR L GE R
Sbjct: 131 VPLSALNPYRTPVTFASTRARAGRVR---CARSISSTKRAPPLAPRSGERRSKSTT---- 183
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQ--- 325
+ + R + +PA K ++ N++E+ L+ + ++LCT+ D S ++
Sbjct: 184 ---QFSRLARFTTSPRALSRPADKRYSTSGNDYEMNLDGKAEIELCTDIDQSSAQKMQRA 240
Query: 326 FSFRHISEIES---AENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVE 382
++F I ++ + A N V + +S ++ N T+R I+ L D S +++
Sbjct: 241 YAFVSIDKLSTKIGARGNVDVVAVVKEVSELSTIRRKSDNTELTKREIV-LADDSTKTIR 299
Query: 383 LTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPD-FAEA 441
+TLWGD ++G+KL M + P+++++S +V+D+ G S+GT+ + + I+ D
Sbjct: 300 MTLWGDLAVEQGEKLAAMTN----PIVAIRSVRVSDYDGVSVGTVSRSDMVIDADDIPRV 355
Query: 442 HELREWFDSGGKNAATVSISRE--IAAG-GAKNEIHK-TVSQIKNEGLGRS-EKPDWVTV 496
EL++W+ GG + T S + E +AG G K +I +++++ E + S +KP + V
Sbjct: 356 AELKKWWTEGG-SETTFSAAGEGLTSAGQGQKRDIETMNLAELQPEEIAPSTDKPVFAWV 414
Query: 497 RAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQ 556
A K D Y A + + NKKV +S +W C+ Q D C+ RY+++ +
Sbjct: 415 CAHTILCKPDQTMYYAA---VPEEGNNKKVVESDGKWYCEANGQTYDTCERRYIMRFKAI 471
Query: 557 DQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVR-FGEIIRSRVFNQYLFRLKIKE 615
D W+ AF + ++ G A EL+ L ++D + + ++ + + F +K+
Sbjct: 472 DGYEGAWLNAFNDEATKMFGISANELHELH---ENDYKAYENAVKKMTYKHWSFLVKVVT 528
Query: 616 ELYGDEQRVKITVIRADQVNYSSESRYLL 644
E Y E + ++T ++ + VNY++ES+ LL
Sbjct: 529 EEYQGELKRRLTAVKCNAVNYAAESKRLL 557
>gi|224122538|ref|XP_002330506.1| predicted protein [Populus trichocarpa]
gi|222872440|gb|EEF09571.1| predicted protein [Populus trichocarpa]
Length = 86
Score = 145 bits (367), Expect = 5e-32, Method: Composition-based stats.
Identities = 69/86 (80%), Positives = 77/86 (89%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQLND 60
MPVNLTPN+I++INGGDVN KPLVQV+DIK +GS QER+R L+SDSV TQHAML TQLND
Sbjct: 1 MPVNLTPNAIAMINGGDVNLKPLVQVLDIKQMGSAQERFRLLVSDSVLTQHAMLGTQLND 60
Query: 61 RVKTGQVKKGSVVQLIDYICSTVQNR 86
RVKTG VKKGSV+QLIDYICS VQ R
Sbjct: 61 RVKTGLVKKGSVIQLIDYICSQVQKR 86
>gi|378755051|gb|EHY65078.1| hypothetical protein NERG_01524 [Nematocida sp. 1 ERTm2]
Length = 569
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 215/453 (47%), Gaps = 33/453 (7%)
Query: 201 KNEAPARIIPIAALNPYQGR-WAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIR 259
K + +I I LNP+Q + W+IKA+V +K +R Y GKVFS + D + +
Sbjct: 140 KRDGDKKIGSIKELNPFQQKAWSIKAKVVSKTTVREYMKDGRAGKVFSIIVTDGES-KCN 198
Query: 260 VTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD 319
+ F VD F++ I++ + Y I+ G+LK A K + +++EIF++ + T+ TE
Sbjct: 199 IIFFTEFVDGFFDKIQIYKTYEITGGALKLANKKYVEDIHDYEIFVDRSFTI-TPTENML 257
Query: 320 SIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMET-QRRILNLKDTSG 378
+ K IS + + + +V ++ ++++V ++RK T ++R L + D SG
Sbjct: 258 NAVKMPSVVTRISRLRE-KMSEVVSLLVVIMTVGEIETVIRKKDQATMKKRTLKVGDDSG 316
Query: 379 RSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGTIPSTQLFINPD 437
+V LW + + +D VL +++ +V+++ IG + NP+
Sbjct: 317 EAVPFVLWEETAD---------MDFSVGDVLLLENVRVSEYQNMPQIGMARDGIISFNPE 367
Query: 438 FAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVR 497
E +L+ W++ KN T S++ + G + + K + ++K G+ ++ TV+
Sbjct: 368 LPEVFKLKGWYN---KNEGTFSVAEPRKSVGRERQKTK-LEEVKANGM------EYATVK 417
Query: 498 AFITFIKSDSFCYTACPLMIGDRQCNKKV---TQSGNRWQCDRCNQEIDECDYRYLLQAQ 554
I +I S Y +CP+ CNKKV +S + C +C++ C Y + A
Sbjct: 418 CTILYISEKSVMYPSCPM----DNCNKKVEHPAESPENYYCSKCDRIYTNCSQSYSVSAS 473
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIK 614
I D T W++ F +S +L K + M +D + + I + + + R++ +
Sbjct: 474 IADDTSSVWLSLFGDSA-SVLFNNLKAVEMEDLSTEDHDEYKKTIAKSIGEEMVIRIRGR 532
Query: 615 EELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
E Y E ++ T + V+Y ES LL I
Sbjct: 533 ETRYNGEPSIQYTAVSITPVDYLEESNNLLAQI 565
>gi|62318947|dbj|BAD94042.1| RNA helicase [Arabidopsis thaliana]
Length = 253
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 144/249 (57%), Gaps = 13/249 (5%)
Query: 407 PVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREI-- 464
PV+++KS KV DF G S+ TI + + INP+ EA +L+ WFDS GK + SI +
Sbjct: 4 PVIAIKSLKVGDFQGVSLSTISRSNVVINPESPEAKKLKSWFDSEGKEISMSSIGSGMSP 63
Query: 465 -AAGGAKNEIHKTV--SQIKNEGLGRSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDR 520
A G+++ V S I + EKP + + RA+I+FIK D + Y AC +
Sbjct: 64 SAKNGSRSLYTDRVLLSHITSNPSLFEEKPVFFSTRAYISFIKPDQTMWYQAC------K 117
Query: 521 QCNKKVTQSGNR-WQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPA 579
CNKKVT++ + + C+ C ++ +EC RY++ ++ D +G TW+++F + E+ILGC A
Sbjct: 118 TCNKKVTEALDSGYWCEGCQRKYEECSLRYIMAVKVTDSSGETWISSFNDEAEKILGCSA 177
Query: 580 KELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSE 639
EL LK E + + ++ ++ ++FR+ + + Y E+R ++TV +++++E
Sbjct: 178 DELNKLKSEEGEVNEYQTKLKEATWSSHVFRVSVTQNEYNGEKRQRVTVKGVAPLDFAAE 237
Query: 640 SRYLLDLIS 648
+R LL IS
Sbjct: 238 TRLLLQDIS 246
>gi|70941362|ref|XP_740979.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56519062|emb|CAH80613.1| hypothetical protein PC000124.04.0 [Plasmodium chabaudi chabaudi]
Length = 360
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 125/195 (64%), Gaps = 7/195 (3%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
++PI L+ Y +W IKARV +K ++R++ +GKVF+ +L D + GEI+V F V
Sbjct: 162 LMPINKLSQYSTKWIIKARVQSKDNIRKFYTGNKEGKVFNIELCD-ESGEIKVNFFGKAV 220
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D++Y+ +EVG++Y ISKG++K A K FN LK++ EI L+ S ++L E D +IPK ++
Sbjct: 221 DKWYDYLEVGKIYKISKGNIKSANKKFNTLKHDCEITLDENSILELLEENDMNIPKYIYN 280
Query: 328 FRHISEIESAENN-SIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTL 385
F ISEI++ N ++VDVIGIV+S IL +K G +++ L L D + ++ +TL
Sbjct: 281 FYPISEIKANINTGTLVDVIGIVLSFQELNQILIKKTGQYKEKKDLMLIDETNETINVTL 340
Query: 386 WGDFCNKEGQKLQEM 400
WG+ K++EM
Sbjct: 341 WGE----SAVKMEEM 351
>gi|344235409|gb|EGV91512.1| Replication protein A 70 kDa DNA-binding subunit [Cricetulus
griseus]
Length = 209
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 116/193 (60%), Gaps = 10/193 (5%)
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
GEIR T FN VD+F+ +IEV +VY SKG+LK A K F+ +KN++E+ ++V C
Sbjct: 26 GEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFSAVKNDYEMTFNNETSVLPC- 84
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLK 374
E+ +P QF F IS++ES +S+VD+IGI S S I ++ + E +R + L
Sbjct: 85 EDGHHLPTVQFDFTGISDLESKSKDSLVDIIGICKSYEDSTKITVKSSNREVAKRNIYLM 144
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
D SG+ V TLWG+ +K Q PV+++K +V+DF G+S+ + S+ + +
Sbjct: 145 DMSGKVVTATLWGEDADKFDGSRQ--------PVMAIKGARVSDFGGRSLSVLSSSTIIV 196
Query: 435 NPDFAEAHELREW 447
NPD EA++LR W
Sbjct: 197 NPDIPEAYKLRGW 209
>gi|145514786|ref|XP_001443298.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410676|emb|CAK75901.1| unnamed protein product [Paramecium tetraurelia]
Length = 632
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 213/455 (46%), Gaps = 46/455 (10%)
Query: 204 APA--RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVT 261
AP+ ++ I L P + IK R+T+K D ++ + G G++FS +++DS+ I+
Sbjct: 197 APSDQNLLKITELYPGMRGFKIKGRITSKSDKTQFKS--GKGQLFSIEIIDSEKSTIQGV 254
Query: 262 CFNAVVDRFYEIIEVGRVYLISKGSLKP---AQKNFNHLKNEWEIFLEATSTVDLCTE-- 316
FN D+FY++I++G+VY G +K + KN N ++E++I E S + E
Sbjct: 255 FFNNQCDKFYDLIDLGKVYYFENGQVKTNRYSSKNQN--QSEYQIHFEEASKISEALEDK 312
Query: 317 EDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDT 376
E D+ P F + I +I++ + D++G++ V P + K+ ++ + L D
Sbjct: 313 EIDAFP---FQIKQIGDIDNLSQDDKCDILGVITEVKPLTQVTTKSNENKAKKNITLFDQ 369
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP 436
+ R +++ LWG + +K Q D +++ + KV D+ T+ ++ +
Sbjct: 370 TQRGIDIVLWG----AQAEKWQFQKD----EIVAFRGLKVTDYQTIRSLTVTNSTTY-EK 420
Query: 437 DFAEAHEL---REWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKN--EGLGRSEKP 491
D + ++ ++++D +N + + + + QIK EG ++
Sbjct: 421 DLTKLQKINGFQDFYDFYSQNKDFIESKPKESKKKF---ALSYIEQIKKDFEGQRNNKLT 477
Query: 492 DWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKV--TQSGNRWQCDRCNQEIDECDYRY 549
+ VRA+IT I + Y C + C +KV QS ++ C CNQ ++ Y+Y
Sbjct: 478 KFYEVRAYITTIFTKLLYYEGCDI------CKRKVVLVQSTKQFFCQNCNQNFNKPSYKY 531
Query: 550 LLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLF 609
+ A+I D TG V+ + G+ IL E + QD EII+ F QY F
Sbjct: 532 IFNAKIADTTGNLPVSVSNDQGQSILKLSCDEFKAKEKNQQD-----EIIKRASFQQYRF 586
Query: 610 RLKIKEELYGDEQ--RVKITVIRADQVNYSSESRY 642
+ K E Y DE R +I+ I D V +E Y
Sbjct: 587 LIIGKMETYNDESRPRFQISSIIQDDVVSDNEELY 621
>gi|145514039|ref|XP_001442930.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410291|emb|CAK75533.1| unnamed protein product [Paramecium tetraurelia]
Length = 633
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 209/446 (46%), Gaps = 49/446 (10%)
Query: 187 YQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVF 246
YQPP + ++ I+ L P + IK R+T+K D+ ++ N G G +F
Sbjct: 196 YQPP-------------SDINLLKISELYPGMRGFKIKGRITSKTDITQFKN--GKGYLF 240
Query: 247 SFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKP---AQKNFNHLKNEWEI 303
+ +++DSD I+ FN + D+FY+ I++G+VY S+K + KN N +++++I
Sbjct: 241 TIEIIDSDKQTIQGVFFNKLCDKFYDFIDIGKVYYFENASVKTNRYSSKNQN--QSDYQI 298
Query: 304 FLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNG 363
E S + + ++D+ I + + I ++++ + DV+G++I + P+ I+ K+
Sbjct: 299 HFEDFSKISIA-QDDEEIDTFAYQIKTIEDVDNLSLDEKCDVLGVIIDIKPTTQIMTKSN 357
Query: 364 METQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS 423
++ + L D + R +++ LWG ++ +K Q D +++ + K++D+
Sbjct: 358 ENRSKKNITLYDQTQRGIDIVLWG----QQAEKWQFQKD----EIVAFRGLKISDYQMVR 409
Query: 424 IGTIPSTQLFIN--PDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIK 481
T+ ++ ++ + + + +E+++ KN + K + QIK
Sbjct: 410 NLTVTNSTIYEKNLSNLKKINGFQEFYEFYSKNKDFLETK---PKESRKKFPLSYIEQIK 466
Query: 482 N--EGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT--QSGNRWQCDR 537
EG+ + + ++A+IT I + Y C C +KV Q + C
Sbjct: 467 KDFEGIRNIKFVKFYEIKAYITNIFTKLLYYEGC------ENCKRKVVYIQQTKLYHCQS 520
Query: 538 CNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGE 597
CNQ D+ Y+Y+ A+I D TG V+ + G++IL E ++ + V
Sbjct: 521 CNQNFDQPSYKYMFNAKIADTTGNLSVSVANDQGQQILQLSCDE-----FQKKSQVDKDN 575
Query: 598 IIRSRVFNQYLFRLKIKEELYGDEQR 623
++ F Q+ F + K E Y DE R
Sbjct: 576 YVKRANFQQFRFLIIGKVETYNDEIR 601
>gi|302820843|ref|XP_002992087.1| hypothetical protein SELMODRAFT_430315 [Selaginella moellendorffii]
gi|300140119|gb|EFJ06847.1| hypothetical protein SELMODRAFT_430315 [Selaginella moellendorffii]
Length = 306
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 146/301 (48%), Gaps = 12/301 (3%)
Query: 246 FSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLIS-KGSLKPAQKNFNHLKNEWEIF 304
SFD++D G EIR+ + + I G VY S G ++ + + + + WEI
Sbjct: 1 MSFDVVDVQGTEIRIIGSDDCALVLSDKIVQGTVYSFSGSGGIRRSNQAYTPFEVTWEIQ 60
Query: 305 LEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGM 364
V +ED + P+ + I E +S VDV+GIVI + R +G
Sbjct: 61 ANK-GMVFTALDEDATFPRIVLAKTSILSACQKERDSFVDVVGIVIWIGTITVTSRDSGT 119
Query: 365 ETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI 424
++R L L D SG SV+L LW +EG +QE +D G P++ VK GKV+D++GKS+
Sbjct: 120 FVKKRTLCLGDDSGHSVDLCLWDLKAEEEGSYIQERIDSGVQPIICVKGGKVSDYNGKSL 179
Query: 425 GTIPSTQLFINPDFAEAHELREW----FDSGGKNAATVSISREIAAGGAKNEIHKTVSQI 480
I + + I P+ +LREW ++ + S SR+ + T+S+I
Sbjct: 180 SAIGVSTILIEPEMEAVADLREWMTLYYNVTNFIHLSTSSSRQTVS------CTTTLSEI 233
Query: 481 KNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQ 540
N L E V A + +K+D F Y AC ++ RQC KK T++ + W C+ CN
Sbjct: 234 SNMQLKVLESSPIYRVIATVKEMKTDEFYYNACINVVNARQCGKKTTRTADGWFCNYCNF 293
Query: 541 E 541
E
Sbjct: 294 E 294
>gi|390352290|ref|XP_800067.3| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
isoform 2 [Strongylocentrotus purpuratus]
Length = 275
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 151/293 (51%), Gaps = 62/293 (21%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLI-----GSTQERYRFLISDSVSTQHAMLATQLN 59
L+ +I+ I G+ S P++Q++ K + G +RYR ++SD T AMLATQLN
Sbjct: 5 LSRGAIAAIFRGENVSCPVLQLLACKKMNAAASGKAVDRYRLMLSDGEHTCTAMLATQLN 64
Query: 60 DRVKTGQVKKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCE---PIGNPKIFSE--- 112
+ V TG++ + ++L +Y C+ + N R++IVVL+++ + E IG+P
Sbjct: 65 EMVSTGELDVKAAMKLKNYSCNPIANDRRVIVVLDLDIVKKGSEIGVSIGDPTPMRAPGQ 124
Query: 113 --SELTAQKTIP----SNNLPQPVRVNNYS--APNSGTFNLQNSGTFNSQNPGSFSTPNS 164
+ Q++ P S++ PQ R +Y AP S T N Q GTF Q+ +
Sbjct: 125 GGAAPAQQQSRPDSTVSHDPPQTARPTSYGTGAPASATPNKQ--GTFYGQSNSAM----- 177
Query: 165 GTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQGRWAIK 224
GS +P ++ PI++L PYQ RW IK
Sbjct: 178 -------GGSTT---------------------------SPKKVQPISSLTPYQNRWTIK 203
Query: 225 ARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVG 277
ARVT K +R ++NARG+GK+FS DLLD GEIR T F +VD++YE+IE+G
Sbjct: 204 ARVTNKTAIRTWSNARGEGKLFSMDLLDQS-GEIRCTAFKDMVDKYYEMIEIG 255
>gi|340504872|gb|EGR31278.1| kelch motif family protein, putative [Ichthyophthirius multifiliis]
Length = 705
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 172/388 (44%), Gaps = 58/388 (14%)
Query: 202 NEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARG-DGKVFSFDLLDSDGGEIRV 260
NE ++ IA L P ++ KARVT KG R + +G + +F D++D + E+ +
Sbjct: 325 NEEEGDLLTIAELYPNIEQFKFKARVTKKGTKRNFTTKKGTNSYLFGIDIIDINQDEMSI 384
Query: 261 TCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEAT-STVDLCTEEDD 319
T F VDRF +IIE G Y+ G + Q N N+ + +I + A+ T + +ED
Sbjct: 385 TFFEQEVDRFIDIIEQGHTYIFQIGKI---QSNDNNQYKKGKIQMTASRDTQIMAIDEDK 441
Query: 320 SIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGR 379
I + + + +S+I+ N +DVI +V + L K G + ++ + + D SG
Sbjct: 442 RITQLKIERKMLSDIQQLSKNDKIDVICLVNKEERKIITL-KTGEQRPKKEIFIFDESGV 500
Query: 380 SVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPS--TQLFINPD 437
VE +WGD EG ++ + G +L +K GKV +++G S TQ+ NPD
Sbjct: 501 EVEFDIWGD----EGDQM--TYNKG--DILLIKDGKVGEYNGNKFLQWSSFMTQIITNPD 552
Query: 438 FAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVR 497
+ N++ + + W +R
Sbjct: 553 -----------------------PQSFKDAKLNNQLDENLKI-------------WTEIR 576
Query: 498 AFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQD 557
AFI +K Y ACP +C KK+ + G+ W C C + E RY+ I D
Sbjct: 577 AFILRVKDTPLYYNACP------KCLKKIREEGDSWYCQSCLENRSEPQARYISSICIGD 630
Query: 558 QTGLTWVTAFQESGEEILGCPAKELYML 585
+G WV A+ E EILGC A E +L
Sbjct: 631 ASGQIWVNAYDEVAREILGCSADEFRIL 658
>gi|387597110|gb|EIJ94730.1| hypothetical protein NEPG_00254 [Nematocida parisii ERTm1]
Length = 573
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 209/454 (46%), Gaps = 38/454 (8%)
Query: 201 KNEAPARIIPIAALNPYQG-RWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIR 259
K EA + I LNP+Q W IKA+V +K +R Y GKVFS + D D +
Sbjct: 141 KKEAKRLVTTIIGLNPFQPITWCIKAKVVSKTSVREYTKDGRAGKVFSIIVTDGDS-KCN 199
Query: 260 VTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD 319
+ F VD FY+ I++ + Y I+ G+LK A K +N +E+EIF++ + T+ T+ D
Sbjct: 200 IIFFTEFVDAFYDKIQLYKTYEITGGTLKLANKTYNEDIHEYEIFVDRSFTI---TQTAD 256
Query: 320 SIPKQQFSFRHISEIESAEN--NSIVDVIGIVISVNPSVPILR-KNGMETQRRILNLKDT 376
++ + + I ++ N N +V ++ ++ SV +LR K+ ++R L + D
Sbjct: 257 AVKVVKMP-KAIVKVSQLVNKINEVVSMLVVITSVGEIETVLRKKDQYAMKKRTLRVGDD 315
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGTIPSTQLFIN 435
SG + +W D E +L ++ ++ ++ IG + N
Sbjct: 316 SGETAPFIVWEDTAAME---------FSMGDILLLEGARITEYQNTPQIGLSRDGIISFN 366
Query: 436 PDFAEAHELREWFDSGGKNAAT-VSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWV 494
P+ E +L+ W++ T S+ + GGA ++ ++ +K + + ++
Sbjct: 367 PELPEVFKLKGWYNKNENILQTSSSVGTRKSVGGANRQVK--IADVKTDCM------EYA 418
Query: 495 TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ---SGNRWQCDRCNQEIDECDYRYLL 551
T++ + FI + YT+C I D CNKKV S + C++C+ C Y Y
Sbjct: 419 TIKCTVLFISEKTLMYTSC---IAD-NCNKKVEHKIDSPEDYYCNKCDATYARCSYSYGP 474
Query: 552 QAQIQDQTGLTWVTAFQESGEEIL-GCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFR 610
I D + WV+AF ++ + A +L L + D+ ++ EI + + + +
Sbjct: 475 SLSISDNSSSIWVSAFGDTASVLFNNLSAVDLNNL--SVNDNDKYKEITQQSIGAEMIIS 532
Query: 611 LKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
++ +E Y E +++ T V+Y E LL
Sbjct: 533 IRGRESTYNGEPQMRYTATAIKPVDYLEECTNLL 566
>gi|387593453|gb|EIJ88477.1| hypothetical protein NEQG_01167 [Nematocida parisii ERTm3]
Length = 573
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 209/454 (46%), Gaps = 38/454 (8%)
Query: 201 KNEAPARIIPIAALNPYQG-RWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIR 259
K EA + I LNP+Q W IKA+V +K +R Y GKVFS + D D +
Sbjct: 141 KKEAKRLVTTIIGLNPFQPITWCIKAKVVSKTSVREYTKDGRAGKVFSIIVTDGDS-KCN 199
Query: 260 VTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD 319
+ F VD FY+ I++ + Y I+ G+LK A K +N +E+EIF++ + T+ T+ D
Sbjct: 200 IIFFTEFVDAFYDKIQLYKTYEITGGTLKLANKTYNEDIHEYEIFVDRSFTI---TQTAD 256
Query: 320 SIPKQQFSFRHISEIESAEN--NSIVDVIGIVISVNPSVPILR-KNGMETQRRILNLKDT 376
++ + + I ++ N N +V ++ ++ SV +LR K+ ++R L + D
Sbjct: 257 AVKVVKMP-KAIVKVSQLVNKINEVVSMLVVITSVGEIETVLRKKDQYAMKKRTLRVGDD 315
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGTIPSTQLFIN 435
SG + +W D E +L ++ ++ ++ IG + N
Sbjct: 316 SGETAPFIVWEDTAAME---------FSMGDILLLEGARITEYQNTPQIGLSRDGIISFN 366
Query: 436 PDFAEAHELREWFDSGGKNAAT-VSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWV 494
P+ E +L+ W++ T S+ + GGA ++ ++ +K + + ++
Sbjct: 367 PELPEVFKLKGWYNKNENILQTSSSVGTRKSVGGANRQVK--IADVKTDCM------EYA 418
Query: 495 TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ---SGNRWQCDRCNQEIDECDYRYLL 551
T++ + FI + YT+C I D CNKKV S + C++C+ C Y Y
Sbjct: 419 TIKCTVLFISEKTLMYTSC---IAD-NCNKKVEHKIDSPEDYYCNKCDATYARCSYSYGP 474
Query: 552 QAQIQDQTGLTWVTAFQESGEEIL-GCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFR 610
I D + WV+AF ++ + A +L L + D+ ++ EI + + + +
Sbjct: 475 SLSISDNSSSIWVSAFGDTASVLFNNLSAVDLNNL--SVNDNDKYKEITQQSIGAEMIIN 532
Query: 611 LKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
++ +E Y E +++ T V+Y E LL
Sbjct: 533 IRGRESTYNGEPQMRYTATAIKPVDYLEECTNLL 566
>gi|242086609|ref|XP_002439137.1| hypothetical protein SORBIDRAFT_09g001220 [Sorghum bicolor]
gi|241944422|gb|EES17567.1| hypothetical protein SORBIDRAFT_09g001220 [Sorghum bicolor]
Length = 388
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 104/181 (57%), Gaps = 4/181 (2%)
Query: 475 KTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRW- 533
KTV++I+N LG KP+ TV+A ++ + S+S CY ACPL++ QCN +T +G W
Sbjct: 159 KTVAEIRN-SLGYLVKPELFTVKAILSVMNSESLCYAACPLVVNGYQCNGAITSNGYEWW 217
Query: 534 QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDV 593
CD C+ CDYRY + Q+ D TG + T Q GEEI G A+ELY++KYE QD
Sbjct: 218 NCDECSMTFAACDYRYKIFVQLADSTGEIYATTSQAVGEEIFGQTARELYLVKYEKQDHA 277
Query: 594 RFGEIIRSRVFNQYLFRLKIKEELYGDEQRV--KITVIRADQVNYSSESRYLLDLISKSF 651
++ +I+ +YL +K+ E + DE +++ + +N S+E+R L+ S
Sbjct: 278 QYNKIVMGVQNCEYLLEVKLNLEAFSDESETLPMFIIVKVESLNPSAENRPLVRRTSVGM 337
Query: 652 R 652
R
Sbjct: 338 R 338
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 71/115 (61%), Gaps = 8/115 (6%)
Query: 21 KPLVQVMDIK-LIGSTQE-RYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
+P++QV+D++ ++GST R+R ++SD V T +ML T + V+ G ++KGS+++L ++
Sbjct: 41 EPVLQVVDVQAVVGSTSSARFRLVLSDGVYTLQSMLGTADDAPVRDGSIRKGSIIRLREF 100
Query: 79 ICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNLPQPVRVN 133
CST+Q+R++IVVL + + + + IGN K F K +P P VN
Sbjct: 101 TCSTIQSRRVIVVLQHDILQREHDIIGNSKPFE------MKNVPKEQCPGTTSVN 149
>gi|147857506|emb|CAN80780.1| hypothetical protein VITISV_011466 [Vitis vinifera]
Length = 280
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 159/315 (50%), Gaps = 58/315 (18%)
Query: 343 VDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVD 402
V V G+V SV+P++ I RK+ + ++ ++ ++LW D GQ+L + D
Sbjct: 11 VYVSGVVQSVSPTMRIRRKSHNDIKKTVV-----------VSLWNDHATNVGQELLDNAD 59
Query: 403 VGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISR 462
FP++++KS K + A +L W+DS K A+ SI
Sbjct: 60 K--FPIVAIKSLKXH---------------------ANKKKLISWYDSECKGASMASIGS 96
Query: 463 EIA---AGGAKNEIHKTVSQ---IKNEGLGRSEKPDWVTVRAFITFIKSD-SFCYTACPL 515
+I+ GG ++ + VS N LG +KP + ++RA+I+FIK D + Y AC
Sbjct: 97 DISPSSKGGVRSMYYDRVSLSHVTSNPSLGE-DKPSFFSIRAYISFIKPDQTMWYRAC-- 153
Query: 516 MIGDRQCNKKVTQS-GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEI 574
+ CNKKVT + G+ + C+ C + DEC RY++ ++ D +G W++ F + E I
Sbjct: 154 ----KTCNKKVTDAIGSEYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLFNDQAERI 209
Query: 575 LGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQV 634
GC A EL LK + ++ ++ LFR+ + + Y +E+R +IT V
Sbjct: 210 FGCSADELDKLK---------SQKLKEAIWVPQLFRISVAQHEYMNEKRQRITARAVVPV 260
Query: 635 NYSSESRYLLDLISK 649
++++ESR LL+ ISK
Sbjct: 261 DFAAESRLLLEEISK 275
>gi|237836603|ref|XP_002367599.1| replication factor-A C terminal domain-containing protein
[Toxoplasma gondii ME49]
gi|211965263|gb|EEB00459.1| replication factor-A C terminal domain-containing protein
[Toxoplasma gondii ME49]
Length = 732
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 129/482 (26%), Positives = 211/482 (43%), Gaps = 75/482 (15%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
+ LNPY RW +K RV + DL NAR + F+ DL D+ G IR + + +
Sbjct: 238 LKTLNPYVVRWRLKVRVVERTDLMSTKNAR---QFFTADLKDASGEVIRAVFWGDAAEHW 294
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE-IFLEATSTVDLCTEEDDSIP---KQQF 326
+++ G+VY +SKG ++ A K FN + +++E +F + ++ E D S K
Sbjct: 295 SPVLKQGKVYQMSKGRVQVANKRFNTVGHQYELVFYRDSEITEVADEGDISTARKLKALM 354
Query: 327 SFRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTL 385
S R I+E + E DV+ +V+ P ++ +K G E +RR + + D S +E++L
Sbjct: 355 SLRDIAESKR-ELPFFADVLVVVVESQPVTSVVSKKTGEEFKRRNVKVVDRSQYEMEISL 413
Query: 386 WGDFCNK-EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHEL 444
WG+ + EG L +V V + G+ +GK + S Q F D ++ L
Sbjct: 414 WGNQVDALEGVSLPRVVAFTGLQVREWQGGR-QASTGKGGEILTSLQSFAGAD-KDSQTL 471
Query: 445 REWFDSGGKNAATVSISR----EIAAGGA--KNEI-HKTVSQIK---------------- 481
+W+ + S+SR E+ GA K + K V +IK
Sbjct: 472 LQWYKENSGSVRFASMSRSGTGEMGGAGALEKRRVEEKCVDEIKQMTDGAFSFIGQIRRV 531
Query: 482 -------NEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSG-NRW 533
+ G R + A I Y AC C KK+ ++G +
Sbjct: 532 YWRARRRDAGEDRDRQMGTSGADAQQAVIM-----YPACS------SCRKKLVENGEGDY 580
Query: 534 QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELY---------M 584
C C++ + D+RY+L D T + F + EE+LG PA EL +
Sbjct: 581 TCYACDKPHAQADWRYMLMVNFVDHTSNITIRCFADQAEELLGVPANELQTWSLKEKEKL 640
Query: 585 LKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
L L DV F +IR+RV E+Y E+RV+ T I+ ++++ + +R L+
Sbjct: 641 LDCLLPLDVYFRVVIRARV------------EMYNGEERVQRTAIKIEKLSPAETARRLV 688
Query: 645 DL 646
L
Sbjct: 689 AL 690
>gi|123477451|ref|XP_001321893.1| OB-fold nucleic acid binding domain containing protein [Trichomonas
vaginalis G3]
gi|121904728|gb|EAY09670.1| OB-fold nucleic acid binding domain containing protein [Trichomonas
vaginalis G3]
Length = 568
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 205/446 (45%), Gaps = 23/446 (5%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
+ L+PY W+IKARVT K ++ + G + FS L D+ G EI ++ ++RF
Sbjct: 140 LTDLSPYILNWSIKARVTRKSPIKTFRAVNGQRRSFSVVLKDTTGTEIEAVFYDGDLERF 199
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRH 330
Y+++ + VY S G + + + N++ I + + + + D I +++
Sbjct: 200 YDLLVLENVYCFSNGIVVQNSNKYGYTANDYTIKFGSRAKIIEVPDLGD-IGFLSYNYMK 258
Query: 331 ISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFC 390
+++I IVD +G+V + P I K +R + L D S ++LTLW D
Sbjct: 259 LADI-VVHKPKIVDFLGVVTQIYPVEKIDSKYRTNISKRSVELCDQSNLLIDLTLWDD-- 315
Query: 391 NKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDS 450
+ + G F VLS+K +++ + G S+ + +T + NP LR+WF++
Sbjct: 316 -----QADNFPENGKF-VLSLKGARISTYRGVSLTALSTTLIDTNPSGEMPDNLRKWFEN 369
Query: 451 GGKNAATV-SISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFC 509
+ + +SR ++ K SQ+ + G S + + I+ I+ +C
Sbjct: 370 AKSSVMDMEKVSRSGTFASPLLDL-KEASQVYDSFKGESFYHSFCGMVIDISVIRKLYYC 428
Query: 510 YTACPLMIGDRQCNKKVTQS--GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAF 567
ACP + C K S + + C+RC+Q ++ +RY I D TG V+
Sbjct: 429 --ACP----NPHCRGKGLYSPEPDLYLCERCHQRVEHPRHRYAFSMVIADHTGSIRVSLL 482
Query: 568 QES--GEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVK 625
GE+I+G + +L D++ ++ FN + +L+ K + + E RVK
Sbjct: 483 GNDILGEKIIGRKIDDWVQETKDLT-DIQIRTLLCPVFFNFFKLKLRTKLDTFNAETRVK 541
Query: 626 ITVIRADQVNYSSESRYLLDLISKSF 651
+V + D++++ + + ++I+ F
Sbjct: 542 TSVFQGDRLSFGDAALQIANIINSKF 567
>gi|339232622|ref|XP_003381428.1| replication protein ADNA-binding subunit [Trichinella spiralis]
gi|316979779|gb|EFV62518.1| replication protein ADNA-binding subunit [Trichinella spiralis]
Length = 337
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 157/335 (46%), Gaps = 64/335 (19%)
Query: 220 RWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRV 279
RW I+ARVT K D+R ++N RGDGK+FS DL+D + GEIR T FN DR + +++ +V
Sbjct: 34 RWCIRARVTRKTDIRNWSNKRGDGKLFSVDLMD-ESGEIRATAFNQECDRLFSVLQPKQV 92
Query: 280 YLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEED-DSIPKQQFSFRHISEIESAE 338
YLI G +K A + F + N++E+ + + V+ C +E+ +P F F EI
Sbjct: 93 YLIRGGIIKVANRQFTSIDNDYELAFSSETQVEPCKDENVHKLPLLSFRFVKFDEIPRTN 152
Query: 339 NNSIVDVIGIVISVNP-SVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKL 397
++D++G+V + + R + E +R L L D + ++ LTLWG+ E +
Sbjct: 153 RKQLIDILGVVEKIGELEHKVARASQRELLKRDLFLIDDTKTAITLTLWGN----EAENF 208
Query: 398 QEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAAT 457
++ P+++VK +++DF G KN
Sbjct: 209 KQ----HGHPIIAVKGVRISDF-------------------------------GDKNLVP 233
Query: 458 VSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMI 517
V+++ K E +G + ++ V + +I ++ Y ACP
Sbjct: 234 VALAD---------------PNRKTEAVG--DNAEYFNVSGSVMYISRENCMYPACP--- 273
Query: 518 GDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYRYLL 551
CNKK+ + ++C++CN++ +R LL
Sbjct: 274 -SPDCNKKIADLNTGLYRCEKCNKDFPSFKWRLLL 307
>gi|302804959|ref|XP_002984231.1| hypothetical protein SELMODRAFT_423315 [Selaginella moellendorffii]
gi|300148080|gb|EFJ14741.1| hypothetical protein SELMODRAFT_423315 [Selaginella moellendorffii]
Length = 241
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 120/226 (53%), Gaps = 10/226 (4%)
Query: 367 QRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGT 426
++R L L D SG SV+L LW +E +QE +D G P++ VK GKV+D++GKS+
Sbjct: 2 KKRTLCLGDDSGHSVDLCLWDLKAEEESSYIQERIDSGVQPIICVKGGKVSDYNGKSLSA 61
Query: 427 IPSTQLFINPDFAEAHELREW----FDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKN 482
I + + I P+ +LREW ++ + S SR+ + T+S+I N
Sbjct: 62 IGVSTILIEPEMEAVADLREWMTLYYNITNFIHLSTSSSRQTVSCTT------TLSEISN 115
Query: 483 EGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEI 542
L + V A + +K++ F Y AC ++ QC KK +++ + W C CN E
Sbjct: 116 MQLKVLKSSPIYRVIATVKEMKTNEFYYNACINVMNAWQCGKKTSRTADGWFCSYCNIES 175
Query: 543 DECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYE 588
+++Y L+ I+D + W AFQE+ +EI+G PAK+L ++ E
Sbjct: 176 ANMEFKYALKMCIEDSSSHVWAIAFQEAAQEIVGIPAKKLATMRDE 221
>gi|221505253|gb|EEE30907.1| replication factor, putative [Toxoplasma gondii VEG]
Length = 726
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 207/482 (42%), Gaps = 75/482 (15%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
+ LNPY RW +K RV + DL NAR + F+ DL D+ G IR + + +
Sbjct: 232 LKTLNPYVVRWCLKVRVVERTDLMSTKNAR---QFFTADLKDASGEVIRAVFWGDAAEHW 288
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE-IFLEATSTVDLCTEEDDSIP---KQQF 326
+++ G+VY +SKG ++ A K FN + +++E +F + ++ E D S K
Sbjct: 289 SPVLKQGKVYQMSKGRVQVANKRFNTVGHQYELVFYRDSEITEVADEGDISTARKLKALM 348
Query: 327 SFRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTL 385
S R I+E + E DV+ +V+ P ++ +K G E +RR + + D S +E++L
Sbjct: 349 SLRDIAESKR-ELPFFADVLVVVVESQPVTSVVSKKTGEEFKRRNVKVVDRSQYEMEISL 407
Query: 386 WGDFCNK-EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHEL 444
WG+ + EG L +V V + G+ +GK + S Q F D ++ L
Sbjct: 408 WGNQVDALEGVSLPRVVAFTGLQVREWQGGR-QASTGKGSEILTSLQSFAGAD-KDSQSL 465
Query: 445 REWFDSGGKNAATVSISR-------EIAAGGAKNEIHKTVSQIK---------------- 481
+W+ + S+SR A + K V +IK
Sbjct: 466 LQWYKENSGSVRFASMSRGGTGEMGGAGALEKRRVEEKCVDEIKQMTDGAFSFIGQIRRV 525
Query: 482 -------NEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSG-NRW 533
+ G R + A I Y AC C KK+ ++G +
Sbjct: 526 YWRARRRDAGEDRDRQMGTSGADAQQAVIM-----YPACS------SCRKKLVENGEGDY 574
Query: 534 QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELY---------M 584
C C++ + D+RY+L D T + F + EE+LG PA EL +
Sbjct: 575 TCYACDKPHAQADWRYMLMVNFVDHTSNITIRCFADQAEELLGVPANELQTWSLKEKEKL 634
Query: 585 LKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
L L DV F +IR+RV E+Y E+RV+ T I+ ++++ + +R L+
Sbjct: 635 LDCLLPLDVYFRVVIRARV------------EMYNGEERVQRTAIKIEKLSPAETARRLV 682
Query: 645 DL 646
L
Sbjct: 683 AL 684
>gi|339232632|ref|XP_003381433.1| replication protein ADNA-binding subunit [Trichinella spiralis]
gi|316979773|gb|EFV62513.1| replication protein ADNA-binding subunit [Trichinella spiralis]
Length = 345
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 145/275 (52%), Gaps = 19/275 (6%)
Query: 220 RWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRV 279
RW I+ARVT K D+R ++N RGDGK+FS DL+D + GEIR T FN DR + +++ +V
Sbjct: 4 RWCIRARVTRKTDIRNWSNKRGDGKLFSVDLMD-ESGEIRATAFNQECDRLFSVLQPKQV 62
Query: 280 YLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEED-DSIPKQQFSFRHISEIESAE 338
YLI G +K A + F + N++E+ + + V+ C +E+ +P F F EI
Sbjct: 63 YLIRGGIIKVANRQFTSIDNDYELAFSSETQVEPCKDENVHKLPLLSFRFVKFDEIPRTN 122
Query: 339 NNSIVDVIGIVISVNP-SVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKL 397
++D++G+V + + R + E +R L L D + ++ LTLWG+ E +
Sbjct: 123 RKQLIDILGVVEKIGELEHKVARASQRELLKRDLFLIDDTKTAITLTLWGN----EAENF 178
Query: 398 QEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAAT 457
++ P+++VK +++DF K++ +P N + E+F+ G +
Sbjct: 179 KQHG----HPIIAVKGVRISDFGDKNL--VPVALADPNRKTETVGDNAEYFNVSG---SV 229
Query: 458 VSISRE--IAAGGAKNEIHKTVSQIKNEGLGRSEK 490
+ ISRE + + +K ++ + N GL R EK
Sbjct: 230 MYISRENCMYPACPSPDCNKKIADL-NTGLYRCEK 263
>gi|221483976|gb|EEE22280.1| replication factor, putative [Toxoplasma gondii GT1]
Length = 726
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 207/482 (42%), Gaps = 75/482 (15%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
+ LNPY RW +K RV + DL NAR + F+ DL D+ G IR + + +
Sbjct: 232 LKTLNPYVVRWCLKVRVVERTDLMSTKNAR---QFFTADLKDASGEVIRAVFWGDAAEHW 288
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE-IFLEATSTVDLCTEEDDSIP---KQQF 326
+++ G+VY +SKG ++ A K FN + +++E +F + ++ E D S K
Sbjct: 289 SPVLKQGKVYQMSKGRVQVANKRFNTVGHQYELVFYRDSEITEVADEGDISTARKLKALM 348
Query: 327 SFRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTL 385
S R I+E + E DV+ +V+ P ++ +K G E +RR + + D S +E++L
Sbjct: 349 SLRDIAESKR-ELPFFADVLVVVVESQPVTSVVSKKTGEEFKRRNVKVVDRSQYEMEISL 407
Query: 386 WGDFCNK-EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHEL 444
WG+ + EG L +V V + G+ +GK + S Q F D ++ L
Sbjct: 408 WGNQVDALEGVSLPRVVAFTGLQVREWQGGR-QASTGKGSEILTSLQSFAGAD-KDSQSL 465
Query: 445 REWFDSGGKNAATVSISR-------EIAAGGAKNEIHKTVSQIK---------------- 481
+W+ + S+SR A + K V +IK
Sbjct: 466 LQWYKENSGSVRFASMSRGGTGEMGGAGALEKRRVEEKCVDEIKQMTDGAFSFIGQIRRV 525
Query: 482 -------NEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSG-NRW 533
+ G R + A I Y AC C KK+ ++G +
Sbjct: 526 YWRARRRDTGEDRDRQMGTSGADAQQAVIM-----YPACS------SCRKKLVENGEGDY 574
Query: 534 QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELY---------M 584
C C++ + D+RY+L D T + F + EE+LG PA EL +
Sbjct: 575 TCYACDKPHAQADWRYMLMVNFVDHTSNITIRCFADQAEELLGVPANELQTWSLKEKEKL 634
Query: 585 LKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
L L DV F +IR+RV E+Y E+RV+ T I+ ++++ + +R L+
Sbjct: 635 LDCLLPLDVYFRVVIRARV------------EMYNGEERVQRTAIKIEKLSPAETARRLV 682
Query: 645 DL 646
L
Sbjct: 683 AL 684
>gi|401405941|ref|XP_003882420.1| replication factor-A C terminal domain-containing protein [Neospora
caninum Liverpool]
gi|325116835|emb|CBZ52388.1| replication factor-A C terminal domain-containing protein [Neospora
caninum Liverpool]
Length = 515
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 212/487 (43%), Gaps = 84/487 (17%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
+ LNPY RW +K RV + DL NAR + F+ DL D+ G IR + +++
Sbjct: 17 LKTLNPYVVRWCLKVRVVERTDLISTKNAR---QFFTADLKDASGEVIRAVFWGDAAEQW 73
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE-IFLEATSTVDLCTEEDDSIP---KQQF 326
+++ G+VY +SKG ++ A K FN + +++E +F + V++ E D S K
Sbjct: 74 SPVLKQGKVYQMSKGRVQVANKRFNTVGHQYELVFYRDSEIVEVPDEGDISTARKLKALM 133
Query: 327 SFRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTL 385
S R I+E E DV+ +V+ P ++ +K G E +RR + + D S +E++L
Sbjct: 134 SLRDIAE-SKREVPFFADVLVVVVESQPITSVVSKKTGEEFKRRNVKVVDRSQYEMEISL 192
Query: 386 WGDFCNK-EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHEL 444
WG+ + EG L +V V + G+ +GK + S Q F + ++ L
Sbjct: 193 WGNQVDALEGVSLPRVVAFTGLQVREWQGGR-QASTGKGSEILTSLQAFAGAE-KDSQSL 250
Query: 445 REWFDSGGKNAATVSISR----EIAAGGA--KNEI-HKTVSQIKNEGLGRSEKPDWVTVR 497
+W+ S+SR ++ A G+ K + K + +IK + G
Sbjct: 251 LQWYKENSGTIRFASMSRSGPGDLGAAGSLEKRRVEEKCIDEIKQKTDG---------AF 301
Query: 498 AFITFIKSDS----------------------------FCYTACPLMIGDRQCNKKVTQS 529
+FI I+ Y AC C KK+ ++
Sbjct: 302 SFIGQIRRVYWRARRRGDEDRDRPMGGSQGAPDPQQAVIMYPACS------SCRKKLVEN 355
Query: 530 G-NRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYML--- 585
G + C C++ + D+RY+L D T V F + EE+LG PA EL
Sbjct: 356 GEGDYTCYACDKSHAQADWRYMLMVNFVDHTSNVAVRCFADQAEELLGVPANELQTWPLK 415
Query: 586 -KYELQD-----DVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSE 639
K +L D DV F +IR+RV E Y E+RV+ T I+ ++++
Sbjct: 416 DKEKLMDCLLPLDVYFRVVIRARV------------ETYNGEERVQRTAIKIEKLSPVEA 463
Query: 640 SRYLLDL 646
+R L+ +
Sbjct: 464 ARRLVTM 470
>gi|393910678|gb|EJD75993.1| replication factor a 1 [Loa loa]
Length = 580
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 186/408 (45%), Gaps = 55/408 (13%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
+ PI L PY W + +VT+ ++R RG +FSF +D G EIRV+ F +
Sbjct: 169 VTPIKLLTPYCKNWRLCIKVTSVDEIR---CIRGQ-HIFSFLAVDDGGVEIRVSAFGDIA 224
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSI-PKQQF 326
R +I ++Y I++ S+K A + ++ +++ E+ L S V CT+ + PK F
Sbjct: 225 CRTATLICPEQMYYITRASVKMANRRYSRNEHDMEVVLRPDSEVTKCTDRPYILSPKVNF 284
Query: 327 SFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLW 386
F I +++ + I E Q+R + + D SG V + LW
Sbjct: 285 EFVRIHNLQNFIDTEI---------------------EELQKREIQVVDDSGYYVAINLW 323
Query: 387 GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGTIPSTQLFINPDFAEAHELR 445
GQK + + + VL+VK V F G S+ ++ S++L +P F EA LR
Sbjct: 324 -------GQKAKMFPNEQYQHVLAVKRLLVRCFQGTISLVSLASSKLLHDPHFPEADALR 376
Query: 446 EWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKS 505
W+ K+ S+++ + HK + Q+K G + + A I+ I +
Sbjct: 377 FWYSENRKSFKPASMNQ-----VSSFHEHKWIKQLKPSLDGH-----FFNLTAMISSIFT 426
Query: 506 DSFCYTACPLMIGDRQCNKK--VTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTW 563
++ Y CP C KK V + + + C +C +E Y Y L ++ D TG
Sbjct: 427 ENAVYKGCP------TCKKKLLVEKDNDLYICSKCGI-CNEYKYYYTLHMELFDFTGTVH 479
Query: 564 VTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRL 611
VTAF + ++++G A E+ K+ D R+ +S +F Y+FRL
Sbjct: 480 VTAFDDCAQKLIGEQADEV--AKFLKFDSERYQSSFKSVLFKPYMFRL 525
>gi|5326840|gb|AAD42062.1|AF132307_1 replication protein A large subunit [Cryptosporidium parvum]
Length = 473
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 223/474 (47%), Gaps = 57/474 (12%)
Query: 209 IPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
+PI +N + +IK R+ K L+ + + F D++D D IRV + +
Sbjct: 1 MPIREVNVNRQTISIKGRIIQKSSLQILKSGL---RFFHLDIIDKDNDVIRVKFWRXKAE 57
Query: 269 RFYEIIEVGRVYLI--SKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQ-Q 325
++ I++ G VY++ + + + FN N +EI V +DDSI K +
Sbjct: 58 EYHNILQHGSVYILKCTGNDVVVSNTKFNDTSNPYEINFSDRCFVRKVENDDDSIGKAPK 117
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELT 384
+ F + +I SIVD+IGIV +PS ++ RKN E RR +++ D +G + +T
Sbjct: 118 YVFTTVKDIREIPVPSIVDLIGIVRHFSPSTKVISRKNNDEVSRRTISVVDKTGFLINIT 177
Query: 385 LWGDFCNKEGQKLQEMVDVGFF--PVLSVKSGKVNDFSGKSIGTIPS-TQLFINPDFAEA 441
LWG+ L E+ D F PV+++KS ++ ++ G+ T+ + + + D +
Sbjct: 178 LWGE--------LAEVSDEKFLGNPVVALKSIQIREYQGRQGSTLNGRSNMEFSIDDGKM 229
Query: 442 HELREWFDSGGKNAATVSISREIAAGGAKN-----EIH--KTVSQIKN------------ 482
ELR+W+DS G + SIS + N +++ +T+ I+N
Sbjct: 230 EELRDWYDSIGSSIKFESISNISSNESPNNFRVNDKLYSGRTLKDIRNRMEDNEFSSTPS 289
Query: 483 -EGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQE 541
+ + R K + V ++ K S Y ACP+ C KKV S + C++C++
Sbjct: 290 FQVIARISKIGSINVNQQVSGDKGGSLTYDACPI------CKKKVLFSTS--YCEKCDES 341
Query: 542 IDECDYRYLLQAQIQDQTGLTWVTAFQESG----EEILGCPAKELYMLKYELQDDVRFGE 597
+ + ++L I+D T V F E G +E+ KE+ E +D +
Sbjct: 342 VVP-ETKFLFPVTIEDHTCSLTVQCFHEIGSTFIKELSASACKEM-----EQNNDKKLNF 395
Query: 598 IIRSR-VFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
I+ + ++ Y ++++K E Y ++++ + + A+ ++ + S +L+ IS+S
Sbjct: 396 ILNLQCMWRHYNLKIQLKAEEYNNQKKTRAIIQSAEPIDLNQISYLMLESISQS 449
>gi|66359222|ref|XP_626789.1| replication protein A1 large subunit [Cryptosporidium parvum Iowa
II]
gi|46228369|gb|EAK89268.1| replication protein A1 large subunit [Cryptosporidium parvum Iowa
II]
Length = 484
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 223/474 (47%), Gaps = 57/474 (12%)
Query: 209 IPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
+PI +N + +IK R+ K L+ + + F D++D D IRV + +
Sbjct: 12 MPIREVNVNRQTISIKGRIIQKSSLQILKSGL---RFFHLDIIDKDNDVIRVKFWRQKAE 68
Query: 269 RFYEIIEVGRVYLI--SKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQ-Q 325
++ I++ G VY++ + + + FN N +EI V +DDSI K +
Sbjct: 69 EYHNILQHGSVYILKCTGNDVVVSNTKFNDTSNPYEINFSDRCFVRKVENDDDSIGKAPK 128
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELT 384
+ F + +I SIVD+IGIV +PS ++ RKN E RR +++ D +G + +T
Sbjct: 129 YVFTTVKDIREIPVPSIVDLIGIVRHFSPSTKVISRKNNDEVSRRTISVVDKTGFLINIT 188
Query: 385 LWGDFCNKEGQKLQEMVDVGFF--PVLSVKSGKVNDFSGKSIGTIPS-TQLFINPDFAEA 441
LWG+ L E+ D F PV+++KS ++ ++ G+ T+ + + + D +
Sbjct: 189 LWGE--------LAEVSDEKFLGNPVVALKSIQIREYQGRQGSTLNGRSNMEFSIDDGKM 240
Query: 442 HELREWFDSGGKNAATVSISREIAAGGAKN-----EIH--KTVSQIKN------------ 482
ELR+W+DS G + SIS + N +++ +T+ I+N
Sbjct: 241 EELRDWYDSIGSSIKFESISNISSNESPNNFRVNDKLYSGRTLKDIRNRMEDNEFSSTPS 300
Query: 483 -EGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQE 541
+ + R K + V ++ K S Y ACP+ C KKV S + C++C++
Sbjct: 301 FQVIARISKIGSINVNQQVSGDKGGSLTYDACPI------CKKKVLFSTS--YCEKCDES 352
Query: 542 IDECDYRYLLQAQIQDQTGLTWVTAFQESG----EEILGCPAKELYMLKYELQDDVRFGE 597
+ + ++L I+D T V F E G +E+ KE+ E +D +
Sbjct: 353 VVP-ETKFLFPVTIEDHTCSLTVQCFHEIGSTFIKELSASACKEM-----EQNNDKKLNF 406
Query: 598 IIRSR-VFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
I+ + ++ Y ++++K E Y ++++ + + A+ ++ + S +L+ IS+S
Sbjct: 407 ILNLQCMWRHYNLKIQLKAEEYNNQKKTRAIIQSAEPIDLNQISYLMLESISQS 460
>gi|67615068|ref|XP_667409.1| replication protein A large subunit [Cryptosporidium hominis TU502]
gi|54658542|gb|EAL37178.1| replication protein A large subunit [Cryptosporidium hominis]
Length = 473
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 223/474 (47%), Gaps = 57/474 (12%)
Query: 209 IPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
+PI +N + +IK R+ K L+ + + F D++D D IRV + +
Sbjct: 1 MPIREVNVNRQTISIKGRIIQKSSLQILKSGL---RFFHLDIIDKDNDVIRVKFWRQKAE 57
Query: 269 RFYEIIEVGRVYLI--SKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQ-Q 325
++ I++ G VY++ + + + FN N +EI V +DDSI K +
Sbjct: 58 EYHNILQHGSVYILKCTGNDVVVSNTKFNDTSNPYEINFSDRCFVRKVENDDDSIGKAPK 117
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELT 384
+ F + +I SIVD+IGIV +PS ++ RKN E RR +++ D +G + +T
Sbjct: 118 YVFSTVKDIREIPVPSIVDLIGIVRHFSPSTKVISRKNNDEVSRRTISVVDKTGFLINIT 177
Query: 385 LWGDFCNKEGQKLQEMVDVGFF--PVLSVKSGKVNDFSGKSIGTIPS-TQLFINPDFAEA 441
LWG+ L E+ D F PV+++KS ++ ++ G+ T+ + + + D +
Sbjct: 178 LWGE--------LAEVSDEKFLGNPVVALKSIQIREYQGRQGSTLNGRSNMEFSIDDGKM 229
Query: 442 HELREWFDSGGKNAATVSISREIAAGGAKN-----EIH--KTVSQIKN------------ 482
ELR+W+DS G + SIS + N +++ +T+ I+N
Sbjct: 230 EELRDWYDSIGSSIKFESISNISSNESPNNFRVNDKLYSGRTLKDIRNRMEDNEFSSTQS 289
Query: 483 -EGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQE 541
+ + R K + V ++ K S Y ACP+ C KKV S + C++C++
Sbjct: 290 FQVIARISKIGSINVNQQVSGDKGGSLTYDACPI------CKKKVLFSTS--YCEKCDES 341
Query: 542 IDECDYRYLLQAQIQDQTGLTWVTAFQESG----EEILGCPAKELYMLKYELQDDVRFGE 597
+ + ++L I+D T V F E G +E+ KE+ E +D +
Sbjct: 342 VVP-ETKFLFPVTIEDHTCSLTVQCFHEIGSTFIKELSASACKEM-----EQNNDKKLNF 395
Query: 598 IIRSR-VFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
I+ + ++ Y ++++K E Y ++++ + + A+ ++ + S +L+ IS+S
Sbjct: 396 ILNLQCMWRHYNLKIQLKAEEYNNQKKTRAIIQSAEPIDLNQISYLMLESISQS 449
>gi|167376383|ref|XP_001733974.1| replication protein A 70 kDa DNA-binding subunit [Entamoeba dispar
SAW760]
gi|165904711|gb|EDR29890.1| replication protein A 70 kDa DNA-binding subunit, putative
[Entamoeba dispar SAW760]
Length = 588
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 192/444 (43%), Gaps = 48/444 (10%)
Query: 204 APA-----RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEI 258
APA ++ P + L + + IK RV +K D +Y G +FSF L D DG EI
Sbjct: 137 APADLSKGKVTPFSLLTTFGSKLIIKGRVVSKNDKFKY----AKGNLFSFVLQDKDGAEI 192
Query: 259 RVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEA-TSTVDLCTEE 317
+ TCFN V D ++ I+VG Y I+K K Q N ++ I L+ + +
Sbjct: 193 KATCFNDVCDEKFDQIKVGETYYITKADYK--QSNGKGYRSAKMIDLDMIIGKYTIIQKS 250
Query: 318 DDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTS 377
D +P S I+++ + ++ D+ ++ P KN E + L D S
Sbjct: 251 SDEVPMIS-SIVPIADLVESPVDATYDICAFLVDKGPEQT--YKN--EKAKVTLTFMDQS 305
Query: 378 GRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPD 437
+VE+ W N++ K ++M + G VL+ S ++ +F K++ +T++ N D
Sbjct: 306 SYAVEVDFW----NEDIDKTKDMEN-GVVYVLT--SLRLREFKYKTLTVTKATKILSNTD 358
Query: 438 ------------FAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGL 485
F + H E + E AG + + E
Sbjct: 359 IEQYDEASLVNKFIQEHTTTEGITVSDLRYLANETTVEFKAGDVRTADQLYCLRKLEEKT 418
Query: 486 GRSEKPDWVTVRAFITFIKSDS-FCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDE 544
+ + V + T K DS FCY +CP C KK+ G+ + C++C ++I
Sbjct: 419 TETSEDVKANVYGYFTMFKVDSGFCYLSCP------DCKKKIA-DGSTF-CEKCQKDIQP 470
Query: 545 CDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVF 604
R++++A I D T WVT F E ++I+G A E+Y + QD F + + F
Sbjct: 471 M-RRFIVRASIADSTSSVWVTIFDEEMKKIIGKSADEMYEMNE--QDSESFENLFKQLTF 527
Query: 605 NQYLFRLKIKEELYGDEQRVKITV 628
+ F L K++ Y E R + TV
Sbjct: 528 IECRFHLVCKKDEYNGETRTRYTV 551
>gi|407037414|gb|EKE38631.1| replication factor A protein 1, putative [Entamoeba nuttalli P19]
Length = 588
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 198/459 (43%), Gaps = 49/459 (10%)
Query: 190 PPNFRNHGPILKNEA-PA-----RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDG 243
P R P+ +A PA +I P + L + + IK RV +K D +Y G
Sbjct: 122 APIVRTGVPVSHQQAAPADLSKGKITPFSLLTTFGSKLIIKGRVVSKNDKFKY----AKG 177
Query: 244 KVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI 303
+FSF L D DG EI+ TCFN V D ++ I+VG Y I+K K Q N ++ I
Sbjct: 178 NLFSFVLQDKDGAEIKATCFNDVCDEKFDQIKVGETYYITKADYK--QSNGKGYRSAKMI 235
Query: 304 FLEA-TSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN 362
L+ + + D +P S I+++ + ++ D+ ++ P KN
Sbjct: 236 DLDMIIGKYTIIQKSSDEVPMIS-SIVPIADLVESPVDATYDICAFLVDKGPEQT--YKN 292
Query: 363 GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK 422
E + L D S +VE+ W N++ K ++M + G VL+ S K+ +F K
Sbjct: 293 --EKAKVTLTFMDQSSYAVEVDFW----NEDIDKTKDMEN-GVVYVLT--SLKLKEFKYK 343
Query: 423 SIGTIPSTQLFINPD------------FAEAHELREWFDSGGKNAATVSISREIAAGGAK 470
++ +T++ N D F + H E + E +G +
Sbjct: 344 TLTVTKATKILSNTDIEQYDEASLVNKFIQEHTTPEGITVSDLRYLANETTVEFKSGDVR 403
Query: 471 NEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDS-FCYTACPLMIGDRQCNKKVTQS 529
+ E + + V + T K D+ FCY +CP C KK+ +
Sbjct: 404 TADQLYCLRKLEEKTSETSEDVKANVYGYFTMFKVDNGFCYLSCP------DCKKKIVE- 456
Query: 530 GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYEL 589
G+ + C++C ++I R++++A I D T WVT F E ++I+G A E+Y +
Sbjct: 457 GSTF-CEKCQKDIQPM-RRFIVRASIADSTSSIWVTIFDEEMKKIIGKSADEMYEINE-- 512
Query: 590 QDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITV 628
QD F + + F + F L K++ Y E R + TV
Sbjct: 513 QDSELFENLFKQLTFIECRFHLICKKDEYNGETRTRFTV 551
>gi|67468384|ref|XP_650233.1| replication factor A protein 1 [Entamoeba histolytica HM-1:IMSS]
gi|56466826|gb|EAL44846.1| replication factor A protein 1, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 588
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 198/459 (43%), Gaps = 49/459 (10%)
Query: 190 PPNFRNHGPILKNEA-PA-----RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDG 243
P R P+ +A PA +I P + L + + IK RV +K D +Y G
Sbjct: 122 APIVRTGVPVSHQQAAPADLSKGKITPFSLLTTFGSKLIIKGRVVSKNDKFKY----AKG 177
Query: 244 KVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI 303
+FSF L D DG EI+ TCFN V D ++ I+VG Y I+K K Q N ++ I
Sbjct: 178 NLFSFVLQDKDGAEIKATCFNDVCDEKFDQIKVGETYYITKADYK--QSNGKGYRSAKMI 235
Query: 304 FLEA-TSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN 362
L+ + + D +P S I+++ + ++ D+ ++ P KN
Sbjct: 236 DLDMIIGKYTIIQKSSDEVPMIS-SIVPIADLVESPVDATYDICAFLVDKGPEQT--YKN 292
Query: 363 GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK 422
E + L D S +VE+ W N++ K ++M + G VL+ S K+ +F K
Sbjct: 293 --EKAKVTLTFMDQSSYAVEVDFW----NEDIDKTKDMEN-GVVYVLT--SLKLKEFKYK 343
Query: 423 SIGTIPSTQLFINPD------------FAEAHELREWFDSGGKNAATVSISREIAAGGAK 470
++ +T++ N D F + H E + E +G +
Sbjct: 344 TLTVTKATKILSNTDIEQYDEASLVNKFIQEHTTPEGITVSDLRYLANETTVEFKSGDIR 403
Query: 471 NEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDS-FCYTACPLMIGDRQCNKKVTQS 529
+ E + + V + T K D+ FCY +CP C KK+ +
Sbjct: 404 TADQLYCLRKLEEKTSETSEDVKANVYGYFTMFKVDNGFCYLSCP------DCKKKIVE- 456
Query: 530 GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYEL 589
G+ + C++C ++I R++++A I D T WVT F E ++I+G A E+Y +
Sbjct: 457 GSTF-CEKCQKDIQPM-RRFIVRASIADSTSSIWVTIFDEEMKKIIGKSADEMYEINE-- 512
Query: 590 QDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITV 628
QD F + + F + F L K++ Y E R + TV
Sbjct: 513 QDSELFENLFKQLTFIECRFHLICKKDEYNGETRTRFTV 551
>gi|449705024|gb|EMD45158.1| replication protein 70 kDa DNAbinding subunit, putative [Entamoeba
histolytica KU27]
Length = 588
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 198/459 (43%), Gaps = 49/459 (10%)
Query: 190 PPNFRNHGPILKNEA-PA-----RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDG 243
P R P+ +A PA +I P + L + + IK RV +K D +Y G
Sbjct: 122 APIVRTGVPVSHQQAAPADLSKGKITPFSLLTTFGSKLIIKGRVVSKNDKFKY----AKG 177
Query: 244 KVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI 303
+FSF L D DG EI+ TCFN V D ++ I+VG Y I+K K Q N ++ I
Sbjct: 178 NLFSFVLQDKDGAEIKATCFNDVCDEKFDQIKVGETYYITKADYK--QSNGKGYRSAKMI 235
Query: 304 FLEA-TSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN 362
L+ + + D +P S I+++ + ++ D+ ++ P KN
Sbjct: 236 DLDMIIGKYTIIQKSSDEVPMIS-SIVPIADLVESPVDATYDICAFLVDKGPEQT--YKN 292
Query: 363 GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK 422
E + L D S +VE+ W N++ K ++M + G VL+ S K+ +F K
Sbjct: 293 --EKAKVTLTFMDQSSYAVEVDFW----NEDIDKTKDMEN-GVVYVLT--SLKLKEFKYK 343
Query: 423 SIGTIPSTQLFINPD------------FAEAHELREWFDSGGKNAATVSISREIAAGGAK 470
++ +T++ N D F + H E + E +G +
Sbjct: 344 TLTVTKATKILSNTDIEQYDEASLVNKFIQEHTTPEGITVSDLRYLANETTVEFKSGDIR 403
Query: 471 NEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDS-FCYTACPLMIGDRQCNKKVTQS 529
+ E + + V + T K D+ FCY +CP C KK+ +
Sbjct: 404 IADQLYCLRKLEEKTSETSEDVKANVYGYFTMFKVDNGFCYLSCP------DCKKKIVE- 456
Query: 530 GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYEL 589
G+ + C++C ++I R++++A I D T WVT F E ++I+G A E+Y +
Sbjct: 457 GSTF-CEKCQKDIQPM-RRFIVRASIADSTSSIWVTIFDEEMKKIIGKSADEMYEINE-- 512
Query: 590 QDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITV 628
QD F + + F + F L K++ Y E R + TV
Sbjct: 513 QDSELFENLFKQLTFIECRFHLICKKDEYNGETRTRFTV 551
>gi|209880341|ref|XP_002141610.1| OB-fold nucleic acid binding domain-containing protein
[Cryptosporidium muris RN66]
gi|209557216|gb|EEA07261.1| OB-fold nucleic acid binding domain-containing protein
[Cryptosporidium muris RN66]
Length = 475
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 204/453 (45%), Gaps = 47/453 (10%)
Query: 209 IPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
+PI +N + +K RV K R R D K F DL+D DG I+V + +
Sbjct: 1 MPIREVNVNRQIITLKGRVIEKS--RTLQTLRNDLKFFHIDLIDKDGDTIKVKFWRNKAE 58
Query: 269 RFYEIIEVGRVYLI--SKGSLKPAQKNFNHLKNEWEI-FLEATSTVDLCTEEDDSIPKQ- 324
+Y IE G VY+ + + + FN+ N +EI F E + E D++I K
Sbjct: 59 EYYNKIEQGDVYIFKCTGSDVAVSNARFNNTSNPYEINFSERCKITKV--EHDETISKDP 116
Query: 325 QFSFRHISEIESAENNSIVDVIGIVISVNP-SVPILRKNGMETQRRILNLKDTSGRSVEL 383
Q+ F I +I + VD+IGI+ S +P S I R+N E RR + + D S + +
Sbjct: 117 QYRFLSIKDIRNMNTPCTVDIIGIIKSSSPLSKVISRRNNEEIPRRNIVIVDDSEYQLNV 176
Query: 384 TLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF-INPDFAEAH 442
TLWGD + + + L PV++ K+ ++ DF GK T+ + N +
Sbjct: 177 TLWGDLASIDDEILSNN------PVVAFKNLQIRDFQGKQGSTLNGRSMIDFNLKNDRMN 230
Query: 443 ELREWFDSGGKNAATVSISREIAAGG----AKNEIHKTVSQIK---NEGLGRSEKPDWVT 495
+++ WF G+ SI+ + K + K++ +++ +E S + V
Sbjct: 231 KVKSWFIEYGQTTKFQSINTTVIQSSNFPMDKLTLEKSLKEVRILMDENSYSSNQTYSVL 290
Query: 496 VR----AFITFI------KSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDEC 545
R F I K S Y ACP +C KKV N C++C++ +
Sbjct: 291 ARISRIGFPNSIGQNISEKKPSLTYDACP------KCKKKVL---NNSYCEKCDESV-IA 340
Query: 546 DYRYLLQAQIQDQTGLTWVTAFQESGEEIL-GCPAKELYMLKYELQDDVRFGEIIRSRVF 604
D +Y+ I+D T V F G +L G + E + EL++DV+ ++ +
Sbjct: 341 DTKYMFPVTIEDYTSSLSVRCFHNIGSIVLSGLESSECKQM--ELRNDVKLNFLLGFKYL 398
Query: 605 NQYL-FRLKIKEELYGDEQRVKITVIRADQVNY 636
QYL R+ ++ E Y ++++ + + A+ +++
Sbjct: 399 WQYLNLRITLRMEEYNNQKKTQAIIQSAEIIDF 431
>gi|297806841|ref|XP_002871304.1| hypothetical protein ARALYDRAFT_908753 [Arabidopsis lyrata subsp.
lyrata]
gi|297317141|gb|EFH47563.1| hypothetical protein ARALYDRAFT_908753 [Arabidopsis lyrata subsp.
lyrata]
Length = 345
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 132/255 (51%), Gaps = 36/255 (14%)
Query: 367 QRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGT 426
+R + L D + ++V ++LW D G +L +M D PV+++KS KV DF
Sbjct: 112 HKRDITLADETKKTVVVSLWNDLATGIGHELLDMADN--HPVIAIKSLKVGDFQ------ 163
Query: 427 IPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREI---AAGGAKNEIHKTV--SQI- 480
EA +L+ W+D+ GK + +I + A G+++ V S I
Sbjct: 164 -------------EATKLKSWYDAEGKETSMSAIGSGMGSSANNGSRSMYSDRVFLSHIT 210
Query: 481 KNEGLGRSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKKVTQSGNR-WQCDRC 538
N LG EKP + + RA+I+FIK D + Y AC + CNKKVT++ + + C+ C
Sbjct: 211 SNPSLGE-EKPVFFSTRAYISFIKPDQTMWYRAC------KTCNKKVTEAMDSGYWCEGC 263
Query: 539 NQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEI 598
++ EC RY++ ++ D TG TW +AF + E+I+GC A EL LK E + F
Sbjct: 264 LKKDQECSLRYIMAVKVSDSTGETWFSAFNDEAEKIIGCTADELNNLKSEEGEVNEFQTK 323
Query: 599 IRSRVFNQYLFRLKI 613
++ ++ +LFR+ I
Sbjct: 324 VKEATWSSHLFRISI 338
>gi|145545796|ref|XP_001458582.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426402|emb|CAK91185.1| unnamed protein product [Paramecium tetraurelia]
Length = 730
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 205/453 (45%), Gaps = 54/453 (11%)
Query: 191 PNFRNHGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNA-RGDGKVFSFD 249
PN RN+ KN P+ +NP + + RV +++ Y + DGK+F
Sbjct: 292 PNQRNN----KNNPQIDFFPLYQINP-SFQQPFRGRVVKVNEIKSYTTKNQKDGKMFGIQ 346
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKN----EWEIFL 305
++D + + F++ ++F++ I GR Y+ S +KPA KN L+ ++
Sbjct: 347 VIDEENL-VSAMFFDSAAEKFHDYIVQGRCYIFSGVLVKPA-KNLEQLQKIGCLPFDYTF 404
Query: 306 EATSTVDLCTEEDD--SIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNG 363
+ S + E DD IP F+F ++ I + SI DV+ ++ S + +KN
Sbjct: 405 DQNSQI---IEIDDVPGIPLNTFNFVKLNSISQQKVGSIQDVVVVIKSSSGVKEFQQKNK 461
Query: 364 METQRRI-LNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG- 421
E RI L + D S + +E+TL+G + ++ E + KS K+N++ G
Sbjct: 462 DEKSTRIQLGVYDDSLQEIEITLYGHLAQQYPYQVGE--------IYMFKSLKINEYQGR 513
Query: 422 KSIGTIPSTQLFINPDFAEAHELREWFDS-GGKNAATVSISREIAAGGAKNEIHKTVSQI 480
KS+ T + + + E EL+ W + GK A VS K +S++
Sbjct: 514 KSLQNNYQTSIHFDKNQKEVKELQNWLQNFDGKLAEPVSKI-------------KLISEL 560
Query: 481 KNEG----LGRSEKPDWVTVRAFITFIK-SDSFCYTACPLMIGDRQCNKKVTQSGNRWQC 535
NE L ++ K + VRA + +K S + Y +C C KKVT + + C
Sbjct: 561 INESNKCELDQNLKI-YSDVRAQLVLVKNSGTLYYQSC------TNCLKKVTTELDSYFC 613
Query: 536 DRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRF 595
CN + E YRY+L +I D +G WV+ + +++ PA L L E ++ +
Sbjct: 614 SSCNLTLKEPKYRYILNCKIADSSGNIWVSVGDQQANQLIDIPANLLKQLTDEGKEKEK- 672
Query: 596 GEIIRSRVFNQYLFRLKIKEELYGDEQRVKITV 628
E + + ++ F+L K E + D +RVK V
Sbjct: 673 NEALSKSAYKEFRFKLTSKLEEFNDVKRVKHAV 705
>gi|340378814|ref|XP_003387922.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Amphimedon queenslandica]
Length = 240
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 140/275 (50%), Gaps = 51/275 (18%)
Query: 53 MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSE 112
MLATQLN+++ + ++ K +V++ + +++ +K+++ + + T++ + +G
Sbjct: 1 MLATQLNEKITSNEISKYCIVRVDKMLINSIGAKKVMIFIKL-TVLYSAQDVGG------ 53
Query: 113 SELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNA 172
L P ++N+ SA + NS P P + R P A
Sbjct: 54 ------------MLGTPRQLNSDSADS------------NSTTPTVKDEPLA---RPPLA 86
Query: 173 --GSIVRSFQPTVQPPYQPPPNFRNH---------GPILKNEAPA----RIIPIAALNPY 217
+ + P P Q PP F + G ++P ++PI ALNPY
Sbjct: 87 QRSQVGVAPAPVAPQPIQTPPRFYGNSAQRTGGMGGASNLMQSPGGGTKNVVPITALNPY 146
Query: 218 QGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVG 277
Q +W IKARVT+K LR YNN+RG+G++ + + +D GEIR T FN DRF+ +EV
Sbjct: 147 QNKWTIKARVTSKPPLRHYNNSRGEGRILTLEFVDHS-GEIRATAFNEDADRFFPNVEVN 205
Query: 278 RVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVD 312
+VY +S+G +KPA K + + N++E+ L A +T++
Sbjct: 206 KVYYVSRGRIKPANKIY-YANNDYELTLGAETTIE 239
>gi|401406884|ref|XP_003882891.1| Replication protein A, 70 kDa DNA-binding subunit, related
[Neospora caninum Liverpool]
gi|325117307|emb|CBZ52859.1| Replication protein A, 70 kDa DNA-binding subunit, related
[Neospora caninum Liverpool]
Length = 621
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 143/268 (53%), Gaps = 28/268 (10%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDS-------------- 253
++ I LN Y W I+ RV K DLR + N RG+ +VF+ ++D
Sbjct: 201 LVNIKDLNSYSQDWMIRGRVADKTDLRLFANPRGESQVFAATIIDHLFEVVLGRCYVSPF 260
Query: 254 --DGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTV 311
GEIR + F V ++ +EVGRVY S+G++ A K +N L +E+EI + + +
Sbjct: 261 VCKKGEIRGSFFGGVAAAWHPRLEVGRVYQFSRGTIDTANKKYNSLSHEYEIKFDDRAVI 320
Query: 312 DLCTEEDDSIPKQQFSFRHISEIESAEN--NSIVDVIGIVISVNPSVPILRKNGMETQRR 369
+ ++D SIP Q FS ++ + + E+ S+VDVIG V S + +L + E QR+
Sbjct: 321 -VEVDDDPSIPAQIFSPVKLATLTTDESLLGSVVDVIGFVTSFCATHSVLARE--EVQRK 377
Query: 370 ILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGTIP 428
+ + D S +V +TLW + L++ V + P++++K+ +V++++GK S+ +
Sbjct: 378 EMTVVDDSSAAVTVTLW----EQHATALKDSV-LAERPLVAIKALRVSEYAGKVSLTSTS 432
Query: 429 STQLFINPD-FAEAHELREWFDSGGKNA 455
+ L ++P +A L W+++ G+ A
Sbjct: 433 RSVLLVDPHGLEDADRLEAWWEAEGEKA 460
>gi|302756891|ref|XP_002961869.1| hypothetical protein SELMODRAFT_77809 [Selaginella moellendorffii]
gi|300170528|gb|EFJ37129.1| hypothetical protein SELMODRAFT_77809 [Selaginella moellendorffii]
Length = 217
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 116/225 (51%), Gaps = 13/225 (5%)
Query: 397 LQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAA 456
+Q+ ++ G P++ VK GKV+D++GKS+ I + + I P+ +LREW
Sbjct: 1 IQKRIESGVQPIICVKGGKVSDYNGKSLLAIGVSTILIEPEMEAVADLREWMTLYYNITN 60
Query: 457 TVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLM 516
+ +S T+S+I + L E V A + +K+D F Y AC +
Sbjct: 61 FIHLSVSCTT---------TLSEISSMQLKVLESFPIYRVIATMKEMKTDEFYYNACINV 111
Query: 517 IGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILG 576
+ +QC +K TQ+ N W C CN E +++Y L+ I+D + W AFQE +EI+G
Sbjct: 112 VNAQQCGRKTTQTANGWFCSYCNIEFANMEFKYALKMCIKDSSSHVWAIAFQEVAQEIVG 171
Query: 577 CPAKELYMLKYELQDDVRFG-EIIRSRVFNQYLFRLKIKEELYGD 620
PAKEL ++YE + + IRS+++N F++ K E Y D
Sbjct: 172 MPAKELATMRYENYLALSLHIDGIRSKIYN---FKIWSKLEKYQD 213
>gi|340378810|ref|XP_003387920.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Amphimedon queenslandica]
Length = 251
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 139/275 (50%), Gaps = 51/275 (18%)
Query: 53 MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSE 112
MLATQLN+++ + ++ K +V++ + +++ +K+++ + + T++ + +G
Sbjct: 1 MLATQLNEKITSNEISKYCIVRVDKMLINSIGAKKVMIFIKL-TVLYSAQDVGG------ 53
Query: 113 SELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNA 172
L P ++N+ +S NS P P + R P A
Sbjct: 54 ------------MLGTPRQLNS------------DSTDSNSVTPTVKDEPLA---RPPLA 86
Query: 173 --GSIVRSFQPTVQPPYQPPPNFRNH---------GPILKNEAPA----RIIPIAALNPY 217
+ + P P Q PP F + G ++P ++PI ALNPY
Sbjct: 87 QRSQVGVAPAPVAPQPIQTPPRFYGNSAQRTGGMGGASNLMQSPGGGTKNVVPITALNPY 146
Query: 218 QGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVG 277
Q +W IKARVT+K LR YNN+RG+G++ + + +D GEIR T FN DRF+ +EV
Sbjct: 147 QNKWTIKARVTSKPPLRHYNNSRGEGRILTLEFVDHS-GEIRATAFNEDADRFFPNVEVN 205
Query: 278 RVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVD 312
+VY +S+G +KPA K + + N++E+ L A +T++
Sbjct: 206 KVYYVSRGRIKPANKIY-YANNDYELTLGAETTIE 239
>gi|222629943|gb|EEE62075.1| hypothetical protein OsJ_16859 [Oryza sativa Japonica Group]
Length = 207
Score = 118 bits (295), Expect = 1e-23, Method: Composition-based stats.
Identities = 53/105 (50%), Positives = 79/105 (75%), Gaps = 3/105 (2%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
+ PIAAL+PY+ +W IKARVTAK L+ +N RG+ K F FDLLD GGE+ CF++
Sbjct: 84 LTPIAALSPYKCKWTIKARVTAKSGLQHLSNDRGEAKFFDFDLLDEQGGEMLAKCFSSAA 143
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVD 312
++FY +IEV +VYLIS+G +KPAQ+ FN +++E+ L+A+++V+
Sbjct: 144 EKFYGLIEVDKVYLISRGLVKPAQEPFN---SDYELALDASASVE 185
>gi|403331791|gb|EJY64864.1| hypothetical protein OXYTRI_14991 [Oxytricha trifallax]
Length = 593
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 131/498 (26%), Positives = 216/498 (43%), Gaps = 79/498 (15%)
Query: 209 IPIAALNPYQGR-WAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
IPI LN G W IK RVT KG Y G + +L+D +G +I T +
Sbjct: 108 IPIKDLNTASGEDWFIKGRVTKKGKKIVY----ATGFMLKIELIDKEGTQIEGTFYKDSC 163
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE-IFLEATSTVDLCTEEDDSIPKQ-- 324
D+F + IE G++Y+I KG + A K F ++N++ IF E + + + +D+ KQ
Sbjct: 164 DKFIDKIEEGKIYVIGKGQIANANKKFTSIQNDYRIIFTEHSHVQEYVSMKDEVESKQSH 223
Query: 325 --------QFSFRHISEIESAENN-SIVDVIGIVISVNPSVPILR------KNGMETQRR 369
+F+F IS++ S +N +DVIGI IS +P + KN ++ R
Sbjct: 224 QSEHFQRFKFNFLKISDVLSCIHNLKQIDVIGINISKDPKRDDIEVKFDYGKNNVKG-RL 282
Query: 370 ILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGT-IP 428
IL + D S S+ +TLWG+ N E + ++ + G+++++ GKSI
Sbjct: 283 ILEIVDNSNESINVTLWGELSNLEFNE---------GDIVIINGGRISNYGGKSINCGSE 333
Query: 429 STQLFINPDFAEAHELREWFDSGGKNAATV------SISREIAAGGAKN----------- 471
++ INP +L + + N S + + A G
Sbjct: 334 HCKIIINPSREVVSDLENYINVDKINLVAKTKQQIQSQEQAVRAEGMSKLRDESQTFIVN 393
Query: 472 ---EIHKTVSQIKNEGLGRSEKPDWV-TVRAFIT-FIK-SDSFCYTACPLMIGDRQCNKK 525
E++ + NEG P + ++ IT F++ SDS Y CP+ C KK
Sbjct: 394 LLEELNCSFEGTFNEGCETFLNPQGIFCLQGNITKFVQPSDSIAYLGCPI------CFKK 447
Query: 526 VTQSGNR---WQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL 582
VT NR + C C + I E + Y + A QD TG + +E E+++
Sbjct: 448 VTD--NRLTGFYCTNCLKIIKE-KHHYFIHAIFQDFTGKVLIGFSREQAEQLMNNIDAST 504
Query: 583 YMLKYE--LQDDVRF-GEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQV----- 634
YM K + + F G + + F + +K K E + R++ + D +
Sbjct: 505 YMTKIRKTFRQECDFEGWLNENVYFKTFKILVKAKSEQFKGVNRLRFYALDIDYISKDSE 564
Query: 635 --NYSSESRYLLDLISKS 650
N+ E+R LL+ + +S
Sbjct: 565 KANFRDENRLLLNQLKQS 582
>gi|302824934|ref|XP_002994105.1| hypothetical protein SELMODRAFT_4757 [Selaginella moellendorffii]
gi|300138043|gb|EFJ04826.1| hypothetical protein SELMODRAFT_4757 [Selaginella moellendorffii]
Length = 232
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 122/239 (51%), Gaps = 8/239 (3%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
IA+L +W+ KARVT K LR++ R G VF+F + DS EIR+ +
Sbjct: 1 IASLTNRSYKWSFKARVTHKDTLRQFTTKR-TGWVFNFYVADSASSEIRIVSYGETARAL 59
Query: 271 YEIIEVGRVYLIS-KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFR 329
E + G +Y+ S L+ A + + WEI + + + T +D+ IP+ +
Sbjct: 60 SEKVIQGAIYIFSGTCGLRSASELYTPFPATWEILADKKMEI-MPTADDECIPRIVLHRK 118
Query: 330 HISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDF 389
I+EI NS +D++G+VI V + R +RR++ + D S SV++ LWGD+
Sbjct: 119 CIAEILDITINSYIDLVGVVIWVGLTTVTPRGVESSNKRRMMTICDNSFHSVDVCLWGDY 178
Query: 390 CNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWF 448
++EG +L E + ++ +K G++ +F+ +S+ + L I+ D E+R W+
Sbjct: 179 ADEEGSQLLENI-----SIVCIKGGRICEFNERSVSVTNVSTLAIDADLDLVQEMRSWY 232
>gi|71030734|ref|XP_765009.1| replication factor A protein [Theileria parva strain Muguga]
gi|68351965|gb|EAN32726.1| replication factor A protein, putative [Theileria parva]
Length = 466
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 206/461 (44%), Gaps = 45/461 (9%)
Query: 209 IPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
PI + Y W I ++ K L+ +GD D++D +G IR + +
Sbjct: 6 FPIKNITTYTSNWTILGKIVDKSPLKA---LKGDNSFLFVDIVDKNGDTIRAKFWGVAAN 62
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
++ +++E G VY SKG++ + K FN + +EI S +D E +D ++ + F
Sbjct: 63 KWNDLLEKGNVYTFSKGTVNLSNKKFNTTPHNYEITFTTDSKIDPSDELNDIKVERNYEF 122
Query: 329 RHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLW 386
+ +I+S ++ +VD++ V S+ P K +T++R+L + D + +E+TLW
Sbjct: 123 VTLRDIKSTSRDTPFVVDILCFVKSLTPVSVTNTKFNRDTKKRLLYVVDDTSYELEVTLW 182
Query: 387 GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELRE 446
G E ++++D PV+ + + +++G G T L + FA+ +R
Sbjct: 183 GQMT--ELPIFEDILDK---PVI-LSQVTIKEWNGGRFG---QTSLNTDIKFADFQSVRN 233
Query: 447 ---------WFDSG-GKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTV 496
W+ +N + ++ + + ++ T+ ++ L RS+
Sbjct: 234 KDRLSTLEAWYQKAMSENESFKTMKTQTMSSSRESYEFTTI----DDALTRSKGYFIFIC 289
Query: 497 RAFITFIKSDS----FCYTACPLMIGDRQCNKKVTQSG-NRWQCDRCNQEIDECDYRYLL 551
+ F K+ Y ACP C KKV + N W+C C+ I RY++
Sbjct: 290 KLRKLFWKNKDGEMRLWYHACP------TCLKKVVEEQENVWRCITCDDSIVTPVLRYIV 343
Query: 552 QAQIQDQTGLTWVTAFQESGEEILGCPAKEL-YMLKYELQDDVRFGEIIRSRVFNQYLFR 610
D +G + T + ESG+++LG +EL M K EL++ + F + + + +
Sbjct: 344 SCVFVDFSGQLFSTVYSESGKKLLGYSEQELDAMDKEELKNTLDFDVLHKDFKVSGFF-- 401
Query: 611 LKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSF 651
K + Y E R V ++V+Y+ E+ LL+ + ++
Sbjct: 402 ---KNKTYNGESRNTFNVTNIEEVDYAKEAESLLERMHLTY 439
>gi|403222035|dbj|BAM40167.1| uncharacterized protein TOT_020000429 [Theileria orientalis strain
Shintoku]
Length = 463
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/475 (23%), Positives = 198/475 (41%), Gaps = 66/475 (13%)
Query: 206 ARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
A PI + Y W I +V K LR + +GD +F D++D +G IR +
Sbjct: 2 APYFPIKDITTYINNWTILGKVVDKSKLR---SIKGDNSLFHIDIVDKNGDTIRAKFWGV 58
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQ 325
+++ EI++ G VY SKG++ + K FN L +++EI S ++ E ++ ++
Sbjct: 59 AANKWNEILQKGSVYTFSKGTVNLSNKKFNTLPHKYEITFNTDSLIEPSDEVNEINVERN 118
Query: 326 FSFRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVEL 383
+ F + +I+S + +VD++ S+ P K ET+RR L + D + +E+
Sbjct: 119 YDFVSLRDIKSTSRDPPFVVDLLCFAKSLTPISVTNTKYNKETKRRSLFVVDDTSYELEV 178
Query: 384 TLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIG--------TIPSTQLFIN 435
T+WGD E ++D PV+ + + +++G IG + S N
Sbjct: 179 TVWGDMT--ESSIFDNILDK---PVI-ISQVTIKEWNGGRIGHTGYSSDIKLASANSVRN 232
Query: 436 PDFAEAHELREWFDSG-GKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLG------RS 488
D L W+ +N S+ + G + T+ + +G G +
Sbjct: 233 KD--RLATLESWYQQALQQNEGFKSMKAQGGLSGRETYEFSTIENVVTKGKGYFTFNCKL 290
Query: 489 EKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT--QSGNRWQCDRCNQEIDECD 546
K W S Y ACP C+KK Q N ++C C+ I + +
Sbjct: 291 RKLFWKNKDG------SARLWYKACP------NCHKKAINEQDSNVYRCISCDDSIVQPE 338
Query: 547 YRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYE----------LQDDVRFG 596
RY + D +G T + + G+++LG +EL + E L D++
Sbjct: 339 PRYSFSCVLIDFSGQIVTTVYGDMGKKLLGLSERELDGMDSEQLRNTLDFDVLHKDLKVS 398
Query: 597 EIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSF 651
+SRV+N E R + ++VNY+ E+ LL+ + ++
Sbjct: 399 GFFKSRVYN--------------GESRTVFNITALEEVNYAKEAENLLEKMELTY 439
>gi|47227766|emb|CAG08929.1| unnamed protein product [Tetraodon nigroviridis]
Length = 193
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 98/176 (55%), Gaps = 7/176 (3%)
Query: 475 KTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRW 533
KT++ +K+E LG EK D+ T A I F++ ++ Y ACP + CNKKV Q +
Sbjct: 22 KTLADVKSEHLGHGEKADYYTCIATIVFLRKENCLYQACP----SQDCNKKVVDQQNGMF 77
Query: 534 QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDV 593
+C++C++E YR +L A I D WVT FQES E ILG A L LK ++
Sbjct: 78 RCEKCDKEFPNFKYRLILSANIADYGDNQWVTCFQESAEAILGQNAAYLGQLKE--SNEA 135
Query: 594 RFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
F E+ + FN ++FR ++K E Y DE R+K TV+ V++ S+ L+ I K
Sbjct: 136 AFNEVFQQANFNSFIFRSRVKLETYNDESRIKATVMEVKPVDHKDYSKRLIMNIRK 191
>gi|401885438|gb|EJT49555.1| damaged DNA binding protein [Trichosporon asahii var. asahii CBS
2479]
Length = 182
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 95/173 (54%), Gaps = 6/173 (3%)
Query: 475 KTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQ 534
KT+ Q K+E LG ++K D+ +V A I +IK ++F Y ACP CNKK+ G W+
Sbjct: 11 KTIGQAKDEQLGMTDKTDYFSVCATILYIKQETFSYPACP----GEGCNKKLIDEGAEWR 66
Query: 535 CDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVR 594
C++CN+ +RY+LQ + D TG W+T F E GE+I+G A EL+ LK E D
Sbjct: 67 CEKCNRTYPGPVHRYILQMNVIDHTGSFWITGFNEVGEQIMGVSANELFKLKQE--SDPE 124
Query: 595 FGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
+ ++ F++ K++ + D RV+ +NY+ S+ L+D I
Sbjct: 125 AEKYFTRAAGREWDFKIMAKQDFFNDTARVRYQARSCAPINYAQSSQALVDKI 177
>gi|384494556|gb|EIE85047.1| hypothetical protein RO3G_09757 [Rhizopus delemar RA 99-880]
Length = 500
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 31/308 (10%)
Query: 318 DDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTS 377
D +IP+ FSF I ++E E + V+ G + +R L + D +
Sbjct: 218 DSAIPQTNFSFVKIIDLEKTEKDETVEN--------------NLTGWQINKRSLLIIDDT 263
Query: 378 GRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPD 437
++LT+WG + E D P+++ K +VN+++G+S+ L NP
Sbjct: 264 EHPIQLTVWGS--------VAEEFDSNNTPIIACKGLRVNEYNGRSLSLPTFGTLTKNPS 315
Query: 438 FAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVR 497
EAH L +WF +N + IS + G N + Q+ N L S D+ R
Sbjct: 316 IPEAHHLYQWFSFKKQNIQQL-ISLKSLKGEKDNIPWINLVQLYNGHLNTSYTLDYFMFR 374
Query: 498 AFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQD 557
I++IK D+ Y CP C KK+ Q + W+C++C + + ++RY+L A I D
Sbjct: 375 GTISYIKHDTIAYPGCP------TCAKKLQQKESSWECEQCKKILSVPNWRYVLFAGISD 428
Query: 558 QTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEEL 617
+G + T F I+G A EL LK + F + +F Y F+ + K
Sbjct: 429 FSGQAFFTIFDNVAVHIIGMTAAEL--LKIADRSMEIFQKEFTKALFKTYNFKARAKAVQ 486
Query: 618 YGDEQRVK 625
Y +K
Sbjct: 487 YNVSWLIK 494
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 22 PLVQVMDIKLIG-STQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYIC 80
P++Q+++ +++ + RY+ ++SD + L L ++ GQ+KK S+V++ +Y C
Sbjct: 26 PILQLINFRVVLLNGHVRYKAIVSDGIHFIPGWLYVCLGVLIENGQIKKNSIVRVKEYSC 85
Query: 81 STVQNRKIIVVLNMETIILDC-EPIGNP 107
+ + N+K +++ ++ + D E +G P
Sbjct: 86 NLISNKKWMLIQKVDFLSTDVQEKVGKP 113
>gi|84995108|ref|XP_952276.1| replication factor A-related protein [Theileria annulata strain
Ankara]
gi|65302437|emb|CAI74544.1| replication factor A-related protein, putative [Theileria annulata]
Length = 466
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 193/451 (42%), Gaps = 37/451 (8%)
Query: 209 IPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
PI + Y W I +V K L+ + +GD D++D +G IR + +
Sbjct: 6 FPIKNITTYTSNWTILGKVVEKSPLK---SLKGDNAFLFVDIVDKNGDTIRAKFWGLAAN 62
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
++ +++E G VY SKGS+ + K FN+ + +EI +D E DD ++ + F
Sbjct: 63 KWNDLLEKGNVYTFSKGSVNLSNKKFNNTPHNYEITFGTDGVIDPSDELDDINVERNYEF 122
Query: 329 RHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLW 386
+ +I+S ++ +VD++ V S+ P K +T++R+L + D + +E+TLW
Sbjct: 123 VTLRDIKSTSRDTPFVVDILCFVKSLTPVSVTNTKFNRDTKKRLLYVVDDTSYELEVTLW 182
Query: 387 GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHE--- 443
G + +L D+ PV+ + + +++G G T DF
Sbjct: 183 G-----QMTELPIFDDILDKPVI-LSQVTIKEWNGGRFGQTSLTTDIKLADFQSVRNKDR 236
Query: 444 ---LREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFI 500
L W+ T + +++ + + + + R++ +
Sbjct: 237 LSTLEAWYQKAMSENETFKTMKTQTMSSSRDSYEFSTIE---DAMTRAKGYFTFNCKLRK 293
Query: 501 TFIKSDS----FCYTACPLMIGDRQCNKKVTQSG-NRWQCDRCNQEIDECDYRYLLQAQI 555
F K+ Y +CP C KKV + N W+C C+ I RY++
Sbjct: 294 LFWKNKDGDMRLWYHSCP------NCYKKVVEEQENVWRCITCDDSIVTPVLRYIVTCVF 347
Query: 556 QDQTGLTWVTAFQESGEEILGCPAKEL-YMLKYELQDDVRFGEIIRSRVFNQYLFRLKIK 614
D +G T + ++G+++LG +EL M K +L++ + F + R + + K
Sbjct: 348 VDFSGQMVSTVYSDNGKKLLGYTEQELDAMDKEQLKNTLDFDVLHRDFKVSGFF-----K 402
Query: 615 EELYGDEQRVKITVIRADQVNYSSESRYLLD 645
+ Y E R V ++V+Y+ E+ LL+
Sbjct: 403 NKTYNGESRNIFNVTNVEEVDYAKETELLLE 433
>gi|402594450|gb|EJW88376.1| BRCA2 repeat family protein [Wuchereria bancrofti]
Length = 539
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 194/467 (41%), Gaps = 78/467 (16%)
Query: 152 NSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPA----R 207
NS N S NS + + S R + ++ P +N P L N+
Sbjct: 89 NSDNARCSSVENSDSLALTSLFSAARRNFKRISLTFKSPL-VKN--PRLDNDTVCGKVGS 145
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
+ PI L PY W + +V + ++R R +F+F +D G EIRV+ F +
Sbjct: 146 VTPIKLLTPYCKNWRLCIKVISVDEIRCIRGQR----IFAFQAVDDGGVEIRVSAFGDIA 201
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
R +I ++Y I+ S+K A K ++ +++ E+ L S V CT+ + ++
Sbjct: 202 HRTSTLICPEQMYYITHASVKMANKRYSRNQHDMEVVLRPDSEVTKCTDRPQILSPKKI- 260
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
++R + + D SG V + LWG
Sbjct: 261 --------------------------------------CKKREIQIVDDSGYYVTVNLWG 282
Query: 388 DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGTIPSTQLFINPDFAEAHELRE 446
QK + + VL+VK V F G S+ ++ ST+L +P F EA LR
Sbjct: 283 -------QKAKVFPSEQYQHVLAVKGLLVRCFQGTLSLVSMASTKLLHDPHFPEADALRS 335
Query: 447 WFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSD 506
W+ A + ++++ NE H+ + Q+K G + + A I+ I +
Sbjct: 336 WYSKNKDKAFKSATVNQVSSF---NE-HRWIKQLKLSVDGH-----FFNLTAMISSIFIE 386
Query: 507 SFCYTACPLMIGDRQCNKK--VTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWV 564
+ Y C C KK V + G+ + C +C +E Y Y L ++ D TG V
Sbjct: 387 NAVYKGCL------TCKKKLLVEKDGDLYICSKCGI-CNEYKYYYTLHMELFDFTGTVHV 439
Query: 565 TAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRL 611
TAF + G++++G A E+ K+ D R+ +S +F Y+FRL
Sbjct: 440 TAFDDCGQKLIGEQADEV--AKFLRFDRDRYQSSFKSVLFKPYMFRL 484
>gi|403336688|gb|EJY67538.1| Subunit of heterotrimeric Replication Protein A (RPA) [Oxytricha
trifallax]
Length = 664
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 112/503 (22%), Positives = 210/503 (41%), Gaps = 70/503 (13%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
+P LN W IKA++ K + + +NN RG G + + DL+D G I+ T F V
Sbjct: 97 FVPFKQLNLQSQDWTIKAKILKKHEKKCWNNERGQGLLMNIDLIDQWGSTIQATFFKDGV 156
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQF- 326
++F +++ G VY+ + G++K + + ++ +++ + + + V C ++ IP
Sbjct: 157 EKFENLLQEGNVYIFTCGNVKTSNSKYTNMSSKYSLAFDKQALVKECETKEKFIPMGNLE 216
Query: 327 SFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLW 386
+ + + EI E DVI ++ + + I KNG QR L + D +G V L +W
Sbjct: 217 NIKSLPEIYKLERGQKCDVIVVIEQIGHTNFIPLKNGGLKQRSNLIVADDTGSCVLLCIW 276
Query: 387 GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP---------- 436
G +E Q+ +D VL V++ K++DF S+ + + + +NP
Sbjct: 277 G----REDIHFQD-IDPRNPSVLYVRNAKISDFGRFSLNSNDESIIEVNPPNLQQKVREL 331
Query: 437 -------------------------DFAEAHELREWFDSGGKNAATVSISRE-------- 463
+F +LR F + T+ S +
Sbjct: 332 QNWYRQIGFKQKLKNLTEMNEYVQNNFGFTRDLRLPFSTPNSVGGTLEYSSQQEVEQKII 391
Query: 464 IAAGGAKNEIHKTVSQIKN-------EGLGRSEKPDWVTVRAFI----TFIK-SDSFCYT 511
I K E K +S++ + + + D + FI + IK +D Y
Sbjct: 392 ICKARLKPEKFKLLSELIHYLNYQIPQAEYNKQSLDQCKYKYFILGYLSKIKINDQPYYK 451
Query: 512 ACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESG 571
ACP+ +C KK+ + +C C + D Y A I D T V ++ G
Sbjct: 452 ACPV----EKCRKKMQITAKGLECRGCLKYYDTFVPAYSFSATISDHTDSIEVQFYRCHG 507
Query: 572 EEILGCPAKELYMLK----YELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKIT 627
E +LGC A++ LK Y + + I R++ + +++ E ++
Sbjct: 508 EALLGCSAQKFVELKENSYYGDDNSLELQNIYNRRLYQNFTMEIQVLYTQPNQENKLSFN 567
Query: 628 VIRA-DQVNYSSESRYLLDLISK 649
+R + +SS+++Y+L+ + +
Sbjct: 568 CMRLFGEETWSSQNKYILNQLKQ 590
>gi|66804925|ref|XP_636195.1| hypothetical protein DDB_G0289513 [Dictyostelium discoideum AX4]
gi|60464550|gb|EAL62688.1| hypothetical protein DDB_G0289513 [Dictyostelium discoideum AX4]
Length = 679
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 190/442 (42%), Gaps = 95/442 (21%)
Query: 220 RWAIKARVTAKGDLRRYNN-ARGDGKVFSFDLLDSDGGEIRVTCF------NAVVDRFYE 272
++ I+A V K L+ +N A G+GK+FS +L+DS G EI+ CF N ++ Y+
Sbjct: 224 QFTIRAMVRNKQPLKSWNKGANGEGKLFSMELVDSTG-EIKCACFSDSSNPNNFINALYD 282
Query: 273 IIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHIS 332
E G+VY I + +K A K +N L ++ E+ + + S V + ++ P ++F+ I+
Sbjct: 283 CFENGKVYFIQRFFVKSANKLYNTLSHQSELSINSESRVMISPDQTQFTP--HYNFKKIA 340
Query: 333 EIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNK 392
+IE+ E N VDVIG + +++P + K G E + + + D + S+ + W N+
Sbjct: 341 DIENLEKNDTVDVIGAITNIDPIANLTSKQGKEFTKFGITIADDTNASINVVFW----NE 396
Query: 393 EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPD-FAEAHELR---EWF 448
+ ++ V VG ++++K KV+DFSG+++ + +N + E LR + F
Sbjct: 397 KATEVAPQVKVG--DIIAMKGVKVSDFSGRTLSYSFGSSFGLNDEQLQETSNLRAHLQNF 454
Query: 449 DSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSF 508
D + T++ S + + V I I++ S
Sbjct: 455 DVNSLQSLTIASSY--------------------------TQSSYEQVNLPIFLIRTIS- 487
Query: 509 CYTACPLMIGDRQCNKKVTQSGNRWQ---------------------------------- 534
PL I D + NKK+ ++ ++Q
Sbjct: 488 --EGSPLFISDPKTNKKLYRTIGQFQRVVPLSQAGEMDKGDEISSKMEWKYKACKKCKKS 545
Query: 535 -----CDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYEL 589
C +C D+ +Y Y + ++ D V ++G+ + G A ELY + E
Sbjct: 546 CPEGSCPQCGS--DDWEYAYRMSLKLSDGDDAISVEVMGKTGDRLFGKSAAELYQMNQE- 602
Query: 590 QDDVRFGEIIRSRVFNQYLFRL 611
+ EI + + N Y+ L
Sbjct: 603 ----QINEIFNTVLSNNYVVSL 620
>gi|21465964|pdb|1L1O|C Chain C, Structure Of The Human Replication Protein A (Rpa)
Trimerization Core
gi|21465967|pdb|1L1O|F Chain F, Structure Of The Human Replication Protein A (Rpa)
Trimerization Core
Length = 181
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 7/184 (3%)
Query: 468 GAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT 527
G N KT+ ++K+E LG+ +KPD+ + A + +++ ++ Y ACP + CNKKV
Sbjct: 1 GGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQACPT----QDCNKKVI 56
Query: 528 -QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLK 586
Q ++C++C+ E YR +L I D WVT FQES E ILG A L LK
Sbjct: 57 DQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELK 116
Query: 587 YELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDL 646
+++ F E+ ++ F ++FR+++K E Y DE R+K TV+ V+Y R L+
Sbjct: 117 --DKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVMS 174
Query: 647 ISKS 650
I +S
Sbjct: 175 IRRS 178
>gi|321470011|gb|EFX80989.1| hypothetical protein DAPPUDRAFT_318086 [Daphnia pulex]
Length = 394
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 162/378 (42%), Gaps = 60/378 (15%)
Query: 209 IPIAALNPYQG---RWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
PI+ L+ + W IK RVT K NN D K F +L+D GEI F
Sbjct: 26 FPISGLHYLKTDHQNWLIKVRVTKKTGKILVNNGISDVKYFKMNLIDLWKGEIEAMAFGD 85
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQ 325
DRF+EI EV C ++DDSIP +
Sbjct: 86 ECDRFFEIFEVE------------------------------------CLDDDDSIPNAE 109
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNP-SVPILRKNGMETQRRILNL-KDTSGRSVEL 383
F F I I + + S VDVI V S+ + + +R LNL D SG S+ L
Sbjct: 110 FYFVPIKTISTMKPGSFVDVIADASFVGKVSMGLSQSTQRHYTKRKLNLIDDVSGDSIVL 169
Query: 384 TLWGDFCNKEGQKLQEMVDVGFFPVL--SVKSGKVNDFSGK-SIGTIPSTQLFINPDFAE 440
T+W D N Q D VL +V+ ++ ++ GK +GT+ +T L IN E
Sbjct: 170 TVWNDLVNDLNQH-----DYFGDSVLRIAVRGAQIVEYKGKLELGTVSTTILKIN---EE 221
Query: 441 AHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFI 500
++ +F+ G+ + I + A + T +IK+ L +P+ +VRA I
Sbjct: 222 LKDIPGFFNIIGRRSQIAPIFEKSYESYAICKDITTFQEIKD--LKTPYRPERYSVRAMI 279
Query: 501 TFIKSDSFCYTACPLMIGDRQCNKKVTQS--GNRWQCDRCNQEIDECDYRYLLQAQIQDQ 558
+ I +S Y C C KKV + N + C +C+ E E + +L+ Q+ D
Sbjct: 280 SIIIKNSPFYEGCYF----EGCRKKVNFNLLTNNYYCSKCDAENPEFRWCLILKFQLNDI 335
Query: 559 TGLTWVTAFQESGEEILG 576
+G VT FQE E+++G
Sbjct: 336 SGSQRVTCFQEGFEDLVG 353
>gi|196018182|ref|XP_002118759.1| hypothetical protein TRIADDRAFT_62772 [Trichoplax adhaerens]
gi|190578288|gb|EDV18754.1| hypothetical protein TRIADDRAFT_62772 [Trichoplax adhaerens]
Length = 218
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 129/256 (50%), Gaps = 50/256 (19%)
Query: 5 LTPNSISLINGGDVNSKPLVQVMDIKLIGSTQ---ERYRFLISDSVSTQHA-MLATQLND 60
L+ +I I G+ P+ QV ++ I + + ERYR ++SD + + MLATQLN
Sbjct: 3 LSAGAIQAICNGENPPTPIFQVAAVRKIQNEKLSVERYRIVLSDGIHAYSSVMLATQLNQ 62
Query: 61 RVKTGQVKKGSVVQLIDYICSTVQ-NRKIIVVLNMETIILDCEP--IGNPKIFSESELTA 117
RV +G++ ++++L +Y C+ VQ RK++V+L++ + E IG PK
Sbjct: 63 RVTSGELDAKAIIKLNNYTCNIVQETRKVLVILDLTVLTCGSETDIIGQPK--------- 113
Query: 118 QKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVR 177
P N+ P + NNY Q S++ N + N
Sbjct: 114 ----PYNDQSAPSKSNNYQP-----------QQEIQQQKPSYAPTNRSMNQVTNP----- 153
Query: 178 SFQPTVQPPYQPPPNFRNHGPILKNEAPARII-PIAALNPYQGRWAIKARVTAKGDLRRY 236
+PT+ P L +++ RI+ PI++L PYQ RW I+ RVT+K ++R++
Sbjct: 154 --RPTIHPQQN-----------LVDKSENRIVFPISSLTPYQNRWTIRTRVTSKSEIRKW 200
Query: 237 NNARGDGKVFSFDLLD 252
+N+RG+GK+FS DL+D
Sbjct: 201 SNSRGEGKLFSVDLID 216
>gi|302825524|ref|XP_002994373.1| hypothetical protein SELMODRAFT_4831 [Selaginella moellendorffii]
gi|300137728|gb|EFJ04565.1| hypothetical protein SELMODRAFT_4831 [Selaginella moellendorffii]
Length = 224
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 5/227 (2%)
Query: 209 IPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
+PI +N + RW+++ARVT KG L + G V S D+ D++ EIR+ F
Sbjct: 1 MPIKDINDHCYRWSLRARVTHKGKLVFFETGTA-GCVMSVDVADAESSEIRIVGFGENAK 59
Query: 269 RFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD-SIPKQQF 326
R IE G VY+ S S ++ ++ + K+ WEI +A+ T+++ EDD IP
Sbjct: 60 RLSSEIEQGSVYIFSGNSGVQRSKPAYTPYKSNWEI--KASKTMEIKRVEDDLRIPNVFL 117
Query: 327 SFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLW 386
+ + + VDVIG V+ + + + +G +RR+L L D S S+++ LW
Sbjct: 118 KRTSVLDASKLSQETFVDVIGGVMWIGQTNISPKDSGAFMRRRMLCLSDESSHSIDMCLW 177
Query: 387 GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF 433
EG ++++ + G P++ VK G+++D++GKSI + L
Sbjct: 178 DSKAEDEGSEIEDKLGRGERPIVCVKGGRISDYNGKSISVTGGSTLL 224
>gi|297736060|emb|CBI24098.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 100/170 (58%), Gaps = 9/170 (5%)
Query: 482 NEGLGRSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKKVTQS-GNRWQCDRCN 539
N LG +KP + ++RA+I+FIK D + Y AC + CNKKVT + G+ + C+ C
Sbjct: 14 NPSLGE-DKPSFFSIRAYISFIKPDQTMWYRAC------KTCNKKVTDAIGSEYWCEGCQ 66
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEII 599
+ DEC RY++ ++ D +G W++ F + E I GC A EL LK + ++ F + +
Sbjct: 67 KNDDECSLRYIMVVKVSDASGEAWLSLFNDQAERIFGCSADELDKLKSQEGEENLFQQKL 126
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+ ++ LFR+ + + Y +E+R +IT V++++ESR LL+ ISK
Sbjct: 127 KEAIWVPQLFRISVAQHEYMNEKRQRITARAVVPVDFAAESRLLLEEISK 176
>gi|294876282|ref|XP_002767631.1| replication protein A large subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239869313|gb|EER00349.1| replication protein A large subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 286
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 148/292 (50%), Gaps = 31/292 (10%)
Query: 279 VYLISKGSLKPAQKNFNHLKNEWEI-FLEATSTVDLCTEEDDSIPKQQFSFRHISEIESA 337
VY SKG++K A K ++ + +EI F E + V++ + +D I K ++SF + E++S
Sbjct: 1 VYTFSKGNVKVANKRYSSCNHNYEIVFEEDSQIVEVQDDVEDHIDKIKYSFCPVRELKSK 60
Query: 338 ENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKL 397
S VD++ ++ P+ + KNG E RR L + D SG V++T W D N + +
Sbjct: 61 SVPSTVDLLVVIKDHRPAGTVNSKNGAELFRRNLTVCDESGCCVDVTFWNDLVNVVDESV 120
Query: 398 QEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAAT 457
+ PV+++K V D+ G+S T+ STQ+ +NPD EA +L+ W+ + G + A
Sbjct: 121 LQTQ-----PVVAMKGVSVRDYGGRSCSTLNSTQIEVNPDIPEAKQLKIWWANTGCSMAF 175
Query: 458 VSISRE---IAAGGAKNEIHK--TVSQIKNE-------GLGRSEKPDWVTVRAFITFIKS 505
++S++ + G + + K T++++KN+ GL S + + F+T
Sbjct: 176 TNLSQQGTSVPGSGGQAMVTKEMTIAEMKNDVKNMDLGGLMHSY--EIIGRLQFVTTRGR 233
Query: 506 DS----FCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQA 553
D Y AC CN+K+ + + + C CN+++ + R L A
Sbjct: 234 DGNDIPIFYMAC------ESCNRKMAEGSDGF-CQACNRQVRTRNLRPCLSA 278
>gi|297743679|emb|CBI36562.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 100/170 (58%), Gaps = 9/170 (5%)
Query: 482 NEGLGRSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKKVTQS-GNRWQCDRCN 539
N LG +KP + ++RA+I+FIK D + Y AC + CNKKVT + G+ + C+ C
Sbjct: 14 NPSLGE-DKPSFFSIRAYISFIKPDQTMWYRAC------KTCNKKVTDAIGSGYWCEGCQ 66
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEII 599
+ DEC RY++ ++ D +G W++ F + E I GC A EL LK + ++ F + +
Sbjct: 67 KNDDECSLRYIMVVKVSDASGEAWLSLFNDQAERIFGCSADELDKLKSQEGEENLFQQKL 126
Query: 600 RSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+ ++ LFR+ + + Y +E+R +IT V++++ESR LL+ ISK
Sbjct: 127 KEAIWVPQLFRISVAQHEYMNEKRQRITARAVVPVDFAAESRLLLEEISK 176
>gi|300120592|emb|CBK20146.2| unnamed protein product [Blastocystis hominis]
Length = 362
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Query: 209 IPIAALNPY-QGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
IPI+A++PY W I+ RVT K +R +NNARG+GK+FS DLLD D GEIRVT F +V
Sbjct: 230 IPISAIHPYLTNGWFIRCRVTNKSSIRTFNNARGEGKLFSVDLLDKDSGEIRVTFFTEMV 289
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI 303
D FY +EVG+VY + A+K FN L NE+E+
Sbjct: 290 DTFYNYLEVGKVYDFCNFKIGFARKQFNTLNNEYEL 325
>gi|399217121|emb|CCF73808.1| unnamed protein product [Babesia microti strain RI]
Length = 455
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 208/471 (44%), Gaps = 73/471 (15%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
I + Y W I ARV K L N + + K+F D++D G IR + D+
Sbjct: 7 IRDITTYTTNWIIIARVVEKSPL---NTLKNNNKLFYIDIVDKLGDTIRAKFWGNAADKH 63
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSI--PKQQFSF 328
+ ++E+G+VY S+G + + + FN N +E+ EA S + EDD + K++F+F
Sbjct: 64 FPLLELGKVYSFSQGRVSVSNRKFNTNPNMYELTFEANSPISPI--EDDGLINTKRRFNF 121
Query: 329 RHISEIE--SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLW 386
I +I+ S E + D++ IV +V + K+G ETQ+R + + D S +E++ W
Sbjct: 122 ISIRDIKNTSKELPFVCDILCIVNTVAQPQILNMKSGDETQKRSIFVVDDSNYQMEVSFW 181
Query: 387 GDFCNKEGQKLQEMVD-VGFFPVLS---------VKSGKVNDFSGKSIGTIPSTQLFINP 436
D N L D +G VLS V+SG +SG SI N
Sbjct: 182 SDKAN-----LDIFNDCIGKSVVLSQIKIKDWQNVRSGY--SWSGSSITYACDE----NV 230
Query: 437 DFAEAHELREWFDSG-GKNAATVSIS------------REIAAGGAKNEIHKTVSQIKNE 483
D ++ H L +W+ KN +S+ +++++ NE+ + E
Sbjct: 231 DKSQLHSLEKWYHEAISKNHDFISMKSNGQSHVYSIERKDLSSISMNNEVGGSY-----E 285
Query: 484 GLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEI 542
+ ++ W IT I Y +C +C KKV N ++ C C+ I
Sbjct: 286 FVAHLKRIYWKNRDGEITLI------YPSC------NKCKKKVHMDENEKFVCPSCDS-I 332
Query: 543 DECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSR 602
E ++RY A D +G + F + G+ ++ A +L L ++ + +
Sbjct: 333 VEPEFRYRFTAIFADYSGHLPIHFF-DIGQSLINVQADKLKSLDHD-----SLKQFLDHD 386
Query: 603 VFNQYLFRLKIKEELYGDEQRVKITVIRADQ---VNYSSESRYLLDLISKS 650
+ Q LFR+ + ++ VK TV RA + VNY E Y+ D++ KS
Sbjct: 387 ILYQ-LFRVSVYAKVSTFNGEVK-TVYRATKVEPVNYEEEIAYMTDVLKKS 435
>gi|449282115|gb|EMC89022.1| Replication protein A 70 kDa DNA-binding subunit [Columba livia]
Length = 196
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 97/160 (60%), Gaps = 3/160 (1%)
Query: 218 QGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVG 277
+ +WAI A VT KG + ++N+RG+GK+FS +L++ + EIR T F+ D+F+ + E+
Sbjct: 27 KSKWAICACVTQKGQICTWSNSRGEGKLFSKELVN-ESSEIRATAFSDHADKFFPLTELD 85
Query: 278 RVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESA 337
+VY SKG+LK A K + +KN++E + ++V C + +P QF F IS+ E+
Sbjct: 86 KVYYFSKGTLKSANKQYTAVKNDYETTFTSETSVVPCNDA-QHLPSVQFDFVSISDFENT 144
Query: 338 ENNSIVDVIGIVISVNPSVPILRK-NGMETQRRILNLKDT 376
+SIV+V G+ S + I+ K N + +R ++L D+
Sbjct: 145 PEDSIVNVSGVCKSYEDVIKIIMKVNNRDVSKRNVHLMDS 184
>gi|302825877|ref|XP_002994510.1| hypothetical protein SELMODRAFT_432429 [Selaginella moellendorffii]
gi|300137509|gb|EFJ04425.1| hypothetical protein SELMODRAFT_432429 [Selaginella moellendorffii]
Length = 373
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 411 VKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREW----FDSGGKNAATVSISREIAA 466
+K G+++D++GKSI + L ++P+ + L EW +D+ T S S+ +
Sbjct: 153 MKGGRISDYNGKSISVTGGSTLLVDPELEDVSWLHEWMVASYDTTNFVHVTNSSSKAVIY 212
Query: 467 GGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKV 526
G KTVS++ + L SE V + I++ F Y AC ++ RQC+KKV
Sbjct: 213 GT------KTVSEMLSINLKVSEFSAIFRVIVSVKEIQTGDFYYPACMKVVNGRQCSKKV 266
Query: 527 TQ-SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYML 585
TQ S + WQC+ C+ + + +Y L I D TG W AF ++ EI+G PA +L
Sbjct: 267 TQVSESMWQCNSCDSDSGDIQLKYALHLCILDSTGHIWAVAFDDAANEIVGMPACKL--- 323
Query: 586 KYELQDD--VRFGEI---IRSRVFNQYLFRLKIKEELYGDE 621
LQDD F I IRS+++N L R K E G +
Sbjct: 324 -AALQDDDYTSFSAIMDSIRSKMYNLKLNRKKTDLEECGQQ 363
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Query: 209 IPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
+PI +N + RW+++ARVT KG L + G V S D+ D++ +I + F
Sbjct: 32 MPIKDINDHCYRWSLRARVTHKGKLVFFETGTV-GCVMSVDVADAESSKICIVGFGENAK 90
Query: 269 RFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD 319
R IE G VY+ S S ++ ++ + K+ WEI +A+ T+++ EDD
Sbjct: 91 RLSSEIEQGSVYIFSGYSGVQHSKPAYTPYKSNWEI--KASKTMEIKRVEDD 140
>gi|88191850|pdb|1YNX|A Chain A, Solution Structure Of Dna Binding Domain A (Dbd-A) Of
S.Cerevisiae Replication Protein A (Rpa)
Length = 114
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 75/112 (66%), Gaps = 1/112 (0%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I I L+PYQ W IKARV+ KG+++ ++N RGDGK+F+ + LD+ GEIR T FN
Sbjct: 4 IFAIEQLSPYQNVWTIKARVSYKGEIKTWHNQRGDGKLFNVNFLDT-SGEIRATAFNDFA 62
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDD 319
+F EI++ G+VY +SK L+PA+ F +L + +E+ L+ + ++ C +E +
Sbjct: 63 TKFNEILQEGKVYYVSKAKLQPAKPQFTNLTHPYELNLDRDTVIEECFDESN 114
>gi|170591825|ref|XP_001900670.1| BRCA2 repeat family protein [Brugia malayi]
gi|158591822|gb|EDP30425.1| BRCA2 repeat family protein [Brugia malayi]
Length = 387
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 161/357 (45%), Gaps = 49/357 (13%)
Query: 279 VYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSI-PKQQFSFRHI------ 331
+Y I+ S+K A K ++ +++ E+ L S V CT+ + PK F F I
Sbjct: 1 MYYITHASVKMANKRYSRNQHDMEVVLRPDSEVTKCTDRPQILSPKVNFEFVRIHNLQSF 60
Query: 332 --SEIESAE------------NNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTS 377
+EIES NN DV+G VI + + K G + Q+R + + D S
Sbjct: 61 IDTEIESFGACEGFLMNKERLNNITEDVLGTVIHIGEMKQLKSKTGEDLQKREIQIVDDS 120
Query: 378 GRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGTIPSTQLFINP 436
G V + LW GQK + + VL+VK V F G S+ ++ ST+L +P
Sbjct: 121 GYYVTVNLW-------GQKAKIFPSEQYQHVLAVKGLLVRCFQGTISLVSMTSTKLLHDP 173
Query: 437 DFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTV 496
F EA L+ W+ S K+ A S S + + H+ + Q+K G + +
Sbjct: 174 HFPEADALQFWY-SKNKDKAFKSASVNQVSSFKE---HRWIKQLKFSVDGH-----FFNL 224
Query: 497 RAFITFIKSDSFCYTACPLMIGDRQCNKK--VTQSGNRWQCDRCNQEIDECDYRYLLQAQ 554
A I+ I ++ Y C C KK V + G+ + C +C +E Y Y L +
Sbjct: 225 TAMISSIFIENAVYKGCL------TCKKKLLVEKDGDLYICSKCGI-CNEYKYYYTLHME 277
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRL 611
+ D TG VTAF + ++++G A E+ K + D R+ +S +F Y+FRL
Sbjct: 278 LFDFTGTVHVTAFDDCAQKLIGEQADEV--AKLLIFDRDRYQSSFKSVLFKPYMFRL 332
>gi|328909495|gb|AEB61415.1| replication protein a 70 kda DNA-binding subunit-like protein,
partial [Equus caballus]
Length = 187
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 98/177 (55%), Gaps = 7/177 (3%)
Query: 475 KTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVT-QSGNRW 533
KT+ ++K+E LG+ +K D+ + A + +++ ++ Y ACP + CNKKV Q +
Sbjct: 14 KTLYEVKSENLGQGDKADYFSSVATVVYLRKENCMYQACP----SQDCNKKVIDQQNGLY 69
Query: 534 QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDV 593
+C++C+ E YR +L I D WVT FQES E ILG Y+ + + +++
Sbjct: 70 RCEKCDSEFPSFKYRMILSVNIADFQENQWVTCFQESAEAILG--QNTAYLGELKEKNEQ 127
Query: 594 RFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKS 650
F E+ ++ F + FR+++K E + DE R+K TV+ V+Y R L+ I K+
Sbjct: 128 AFEEVFQNANFRSFTFRIRVKLETFNDESRIKATVMDVKPVDYREYGRRLIMNIRKN 184
>gi|70952412|ref|XP_745376.1| replication factor A-related protein [Plasmodium chabaudi chabaudi]
gi|56525679|emb|CAH78783.1| replication factor A-related protein, putative [Plasmodium chabaudi
chabaudi]
Length = 482
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 205/469 (43%), Gaps = 47/469 (10%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
+ I+ + Y +W IKA+V K L + N + FS D+ D G I + +
Sbjct: 2 LFRISQITTYVSKWIIKAKVVNKSKLSTFKN---NNSFFSIDITDVHGDSISCKFWGSSA 58
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D+++ IE+ +VY+ SKG + A +N++K+++E+ S + ++ + ++ S
Sbjct: 59 DKWFNNIELKKVYIFSKGRVSIANPKYNNVKHKYELTFNEDSEIHEVKDDGEIKIQKNIS 118
Query: 328 FRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
++ +I+ A + D+IGIV + P + K G + ++ + + D + S E++
Sbjct: 119 LVNLRDIKIATKETPFTADLIGIVKHICPPNNLKTKQGNDIVKQNIIIVDDTKHSFEISF 178
Query: 386 WGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHE-- 443
W N + L+E ++ F +S+++ ND + G S + N + ++
Sbjct: 179 WDSNVNLIEKDLKEN-EIYIFTNISIRNW--NDMKNGTFGVTSSIEKVENLNDELKNKCL 235
Query: 444 -LREWFDSGGKNAATVSISREIAAGGAKN-EIHKTVSQIKNEGLGRSEKPDWVTVRAFIT 501
+ EW+++ GK ++ ++ + + H VS + N+ LG+ + R
Sbjct: 236 GISEWYNNNGKYEQFTNMKNILSNDVIQTPDKHYAVSDV-NDVLGKISGTYTLVGRIKRI 294
Query: 502 FIKSDS----FCYTACPLMIGDRQCNKKVTQSGNR-------------------WQCDRC 538
+ KS F Y AC +C KK+ SG + C C
Sbjct: 295 YWKSKENEHRFYYPACT------KCKKKLLSSGQDNTQGMDYDNSNFNNDESCVYSCMNC 348
Query: 539 NQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEI 598
++ + Y Y D +G + AF + G +LG A+EL L + D + +
Sbjct: 349 DENDVKPFYNYTFNFLFMDFSGSITLRAFSDEGFNLLGKKAEELKGLDEDTLDYLFNYDF 408
Query: 599 IRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
+ + +Y +++ +++Y +RV T +R YS S YLL+ I
Sbjct: 409 L----YKEYKVVVRVSQKIYNGIERVNFTAMRIFPQKYSDIS-YLLNEI 452
>gi|300120593|emb|CBK20147.2| unnamed protein product [Blastocystis hominis]
Length = 182
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 96/176 (54%), Gaps = 5/176 (2%)
Query: 474 HKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGD-RQCNKKVTQSGN 531
KT+S I++E LG EKPD++TV+ + I D S Y ACP + D R+C KK+ Q +
Sbjct: 4 RKTLSAIQDEQLGFKEKPDYLTVKVMVRSIPHDRSVVYPACPNVKEDGRKCQKKLIQGVD 63
Query: 532 RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQD 591
W C+ CN+ ++ +YRY+ ++ D +G +V F + GE PA + L E +
Sbjct: 64 GWSCESCNRVVEAPEYRYIFNMEVMDYSGSQYVQLFNDEGERFFEIPAGRMNEL--EKSN 121
Query: 592 DVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
+ ++ ++R+F +Y+ L++K + RV+ TV R D V+ E L L+
Sbjct: 122 SEEYEKVFKNRLFKEYIMTLRVKVD-QSMTSRVRCTVYRFDPVDVDKEVDDLASLL 176
>gi|194904084|ref|XP_001980998.1| GG17468 [Drosophila erecta]
gi|190652701|gb|EDV49956.1| GG17468 [Drosophila erecta]
Length = 228
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 119/241 (49%), Gaps = 18/241 (7%)
Query: 210 PIAALNPYQGRW-AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
PI +L P +IKARVT K ++ ++NNA DG +F +LLD + GEI FN +++
Sbjct: 1 PICSLLPTLCNMTSIKARVTWKSEITQWNNAGKDGIIFIMNLLD-ESGEITGVVFNNLIN 59
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
FY I+ G VY+ S+ ++ A+ F KN + +FL + V+L E IP++ ++F
Sbjct: 60 AFYGQIQTGLVYIFSRFQVQQAENCFKVSKNPFAVFLLWNTVVELSASE--RIPRETYNF 117
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD 388
+SE+ + + VD IGI V L G + R IL L D + V L LW
Sbjct: 118 LPLSEVSTKPDKEPVDAIGICTEVRD----LDHRGGHSIREIL-LVDPDYQPVMLNLW-- 170
Query: 389 FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGTIPSTQLFINPDFAEAHELREW 447
KE + + D V+ VK + + + T + INPD +A + EW
Sbjct: 171 --EKEAENFEGRPD----DVIVVKGARAQPHNNAIKLNASWYTNVQINPDIPDATSMLEW 224
Query: 448 F 448
+
Sbjct: 225 Y 225
>gi|221486920|gb|EEE25166.1| replication factor, putative [Toxoplasma gondii GT1]
Length = 410
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 118/204 (57%), Gaps = 10/204 (4%)
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
GEIR + F V ++ +EVGRVY S+G++ A K +N L +E+EI + + + + T
Sbjct: 52 GEIRASFFGRVAATWHPRLEVGRVYQFSRGTIDTANKKYNSLSHEYEIKFDDRAVI-VET 110
Query: 316 EEDDSIPKQQFS-FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGM-ETQRRILNL 373
++D SIP Q FS + + + + S+VDVIG V S + +L +N E +R+ L++
Sbjct: 111 DDDPSIPAQIFSPLKLATLTDDSLVGSVVDVIGFVTSFCETHSVLARNTKDEVRRKELSI 170
Query: 374 KDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGTIPSTQL 432
D SG +V +TLW + L++ V + P+L++K+ +V++++GK S+ + + +
Sbjct: 171 VDDSGAAVTVTLW----EQHATALKDSV-LAERPLLAIKAVRVSEYAGKVSLTSTSRSVI 225
Query: 433 FINPD-FAEAHELREWFDSGGKNA 455
++P EA L W+++ G+ A
Sbjct: 226 LVDPHGLEEADLLAAWWEAEGEKA 249
>gi|429327570|gb|AFZ79330.1| hypothetical protein BEWA_021780 [Babesia equi]
Length = 467
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 191/455 (41%), Gaps = 44/455 (9%)
Query: 209 IPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
IPI + Y W I AR+ K L+ + + D S D+ D +G IR +
Sbjct: 6 IPIKNITTYTSNWTILARIIDKSPLK---SIKSDNSFMSIDIKDKNGDTIRGKFWGVAAT 62
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
++ +I++ G VY SKGS+ A K FN+ + +E+ S ++ + D ++ ++F
Sbjct: 63 KWDDILQKGNVYTFSKGSVNLANKKFNNTPHNYELTFNIDSQIEQADDIGDIDNERNYNF 122
Query: 329 RHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLW 386
+ EI+S S +VD++ S++P K E +RR L++ D SG +E+TLW
Sbjct: 123 VTLREIKSTARESPFMVDILCFAKSISPISMTSTKFSKEMKRRTLHIVDDSGYELEITLW 182
Query: 387 GDFCNKEGQKLQEMVD----VGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAH 442
G E + L +++D V + G+ S S I + Q + D +
Sbjct: 183 GQMA--ELELLDDILDKPLIVSQITIKEWNGGRYGQSSLASDIKIANQQNVRDKD--KLS 238
Query: 443 ELREWFDSG-GKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLG------RSEKPDWVT 495
L W+ +N S+ + + + + +I ++ G + + W
Sbjct: 239 NLETWYHQALSQNEIFKSLKSQSSISNKETYEFSNIEKINSKTKGGYTFNCKLRRIFWKN 298
Query: 496 VRAFITFIKSDSFCYTACPLMIGDRQCNKKVT--QSGNRWQCDRCNQEIDECDYRYLLQA 553
+ Y +CP+ C KKV + N ++C C+ + R+L
Sbjct: 299 KDG------TTRLWYQSCPM------CFKKVIIDEDSNIYRCIACDDAVVTPVLRFLFTC 346
Query: 554 QIQDQTGLTWVTAFQESGEEILGCPAKELYML-KYELQDDVRFGEIIRSRVFNQYLFRLK 612
D +G + E+G +++G ++L L K +L++ + F V F++
Sbjct: 347 LFIDYSGQIICNIYGENGTKLIGMTEQQLDALDKDKLKNALDF-------VATHKDFKIS 399
Query: 613 --IKEELYGDEQRVKITVIRADQVNYSSESRYLLD 645
K + Y E + V + VN+ E+ LLD
Sbjct: 400 GFYKSKTYNGEVKNTFNVTNIELVNHIDEANMLLD 434
>gi|328700730|ref|XP_003241367.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Acyrthosiphon pisum]
Length = 323
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 115/235 (48%), Gaps = 26/235 (11%)
Query: 221 WAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
W+I ARV K D+ + G+GK F+ L+D EIR T F VDR + ++ VY
Sbjct: 17 WSITARVLKKSDVLPF--KHGNGKYFTTILIDK-TTEIRATAFGNDVDRLFSQLQENNVY 73
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENN 340
I G +K A K +N KN++EI + ++ D IP + I ++ S + N
Sbjct: 74 NIKNGEIKEADKAYNKSKNDYEIIFNGLTVIERSGVTD--IPSHP-QLKTIEKVFSMDKN 130
Query: 341 SIVDVIGIVISVNPSVPILRKNGMET--QRRILNLKDTSGRSVELTLWG----DFCNKEG 394
+++D IG++I + S I + N +T R I+ L D SG V +TLW +F EG
Sbjct: 131 TLIDTIGVIIKIEQSKKIKKINSNDTLILRNII-LADKSGVRVTVTLWDTEATNFNANEG 189
Query: 395 QKLQEMVDVGFFPVLSVKSGKVNDFSG-KSIGTIPSTQLFINPDFAEAHELREWF 448
+S+ GK+ D+ K I S+++ INP++ E L+ W+
Sbjct: 190 ------------DTMSIIGGKIIDYKNVKKISVTGSSKIEINPNWNETLHLQNWY 232
>gi|312072189|ref|XP_003138952.1| BRCA2 repeat family protein [Loa loa]
Length = 502
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 155/353 (43%), Gaps = 53/353 (15%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
+ PI L PY W + +VT+ ++R RG +FSF +D G EIRV+ F +
Sbjct: 176 VTPIKLLTPYCKNWRLCIKVTSVDEIR---CIRGQ-HIFSFLAVDDGGVEIRVSAFGDIA 231
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSI-PKQQF 326
R +I ++Y I++ S+K A + ++ +++ E+ L S V CT+ + PK F
Sbjct: 232 CRTATLICPEQMYYITRASVKMANRRYSRNEHDMEVVLRPDSEVTKCTDRPYILSPKVNF 291
Query: 327 SFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLW 386
F I +++ + I E Q+R + + D SG V + LW
Sbjct: 292 EFVRIHNLQNFIDTEI---------------------EELQKREIQVVDDSGYYVAINLW 330
Query: 387 GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGTIPSTQLFINPDFAEAHELR 445
GQK + + + VL+VK V F G S+ ++ S++L +P F EA LR
Sbjct: 331 -------GQKAKMFPNEQYQHVLAVKRLLVRCFQGTISLVSLASSKLLHDPHFPEADALR 383
Query: 446 EWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKS 505
W+ K+ S+++ + HK + Q+K G + + A I+ I +
Sbjct: 384 FWYSENRKSFKPASMNQ-----VSSFHEHKWIKQLKPSLDGH-----FFNLTAMISSIFT 433
Query: 506 DSFCYTACPLMIGDRQCNKK--VTQSGNRWQCDRCNQEIDECDYRYLLQAQIQ 556
++ Y CP C KK V + + + C +C +E Y Y L +
Sbjct: 434 ENAVYKGCP------TCKKKLLVEKDNDLYICSKCGI-CNEYKYYYTLHVSAE 479
>gi|68077085|ref|XP_680462.1| replication factor A-related protein [Plasmodium berghei strain
ANKA]
gi|56501391|emb|CAH98106.1| replication factor A-related protein, putative [Plasmodium berghei]
Length = 514
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 202/466 (43%), Gaps = 47/466 (10%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
I+ + Y +W IKA+V K L + N + FS D+ D G I + + D++
Sbjct: 38 ISQITTYVSKWIIKAKVVNKSKLSTFKN---NNSFFSIDITDVHGDSISCKFWGSSADKW 94
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRH 330
+ IE+ +VY+ SKG + A +N +K+++E+ S + ++ + ++ S +
Sbjct: 95 FNNIELKKVYIFSKGRVSIANPKYNTVKHKYELTFNEDSEIHEVKDDGEIKIQKNISLVN 154
Query: 331 ISEIESA--ENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD 388
+ +I+ A E D+IGIV + P + K G + ++ + + D + S E++ W
Sbjct: 155 LRDIKIATKETPFTADLIGIVKHICPPNNLKTKQGNDIIKQNIIIVDDTKHSFEISFWDS 214
Query: 389 FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF--INPDFAE-AHELR 445
N + L+E ++ F +S+++ ND + G S + +N + E +
Sbjct: 215 NVNLIEKDLKEN-EIYIFTNISIRNW--NDMKNGTFGVTSSIEKVENLNDELKEKCLGIS 271
Query: 446 EWFDSGGKNAATVSISREIAAGGAKN-EIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIK 504
EW+++ GK ++ ++ + + H +S + N+ L + + R + K
Sbjct: 272 EWYNNNGKYEQFTNMKNILSNDVIQTPDKHYALSDV-NDVLAKISGTYTLVGRIKRIYWK 330
Query: 505 SDS----FCYTACPLMIGDRQCNKKVTQSGNR-------------------WQCDRCNQE 541
S F Y AC +C KK+ SG + C C++
Sbjct: 331 SKENEHRFYYPACT------KCKKKLLSSGQDSAQGVDYDNSNFNNEENCVYSCMNCDEN 384
Query: 542 IDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRS 601
+ Y Y D +G + AF + G +LG A+EL L + D + + +
Sbjct: 385 NVKPFYNYTFNFLFMDFSGSITLRAFSDEGFNLLGKKAEELKGLDEDTLDYLFNYDFL-- 442
Query: 602 RVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
+ +Y +++ +++Y +RV T +R YS S YLL+ I
Sbjct: 443 --YKEYKVVVRVSQKIYNGIERVNFTAMRIFPQKYSDIS-YLLNEI 485
>gi|345484741|ref|XP_003425113.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Nasonia vitripennis]
Length = 167
Score = 97.1 bits (240), Expect = 3e-17, Method: Composition-based stats.
Identities = 49/132 (37%), Positives = 80/132 (60%), Gaps = 5/132 (3%)
Query: 221 WAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
W KARVT K D++ Y G +F+FDL+DS G +IR ++ +V+ F+E ++V +VY
Sbjct: 40 WTFKARVTHKTDIKNY----ASGNLFNFDLIDSSG-QIRCVVYHPLVEHFFEKVDVNKVY 94
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENN 340
L S LK + K +NH N +E+ L ST+ CT+ IP +++F ++ + + N
Sbjct: 95 LFSNVLLKASNKTYNHYDNLFELNLYEASTITECTDNAVDIPLNKYNFINLINLSDCKRN 154
Query: 341 SIVDVIGIVISV 352
I+DVIGI+ ++
Sbjct: 155 DIIDVIGIITNI 166
>gi|328865102|gb|EGG13488.1| putative ssDNA-binding protein [Dictyostelium fasciculatum]
Length = 669
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 177/396 (44%), Gaps = 41/396 (10%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLD---SDGGEIRVTCF- 263
I I AL+ G + I A V K D++ + N G++FS + D S I+ T F
Sbjct: 204 ICDIDALSEGMGSYTICAVVKNKSDIKEWKNVTSSGRLFSVEFADDSPSTCNTIKATVFG 263
Query: 264 NAVVDRFYEIIEVGRVYLIS-KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIP 322
+ ++ +E G+ Y++S G ++ + FN+ K+++E+ L +T+ T++ I
Sbjct: 264 DPYCASLHQQLEAGKTYMVSGSGGVRKNSQKFNNTKHQYELTLGRDTTITPVTDQSQVIK 323
Query: 323 KQ---QFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRIL-----NLK 374
+F F I+ + S N +VDV+G V SV+ + I K + ++L ++
Sbjct: 324 SAGVVKFQFTPINSLVSLGANMMVDVLGEVTSVSTPIDITTKATERAKSKVLPKWAITIR 383
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
D + +E++ WGD + K + VG ++ +K+ K+ F+G S+ S+++ +
Sbjct: 384 DNTNSGIEVSFWGD----DVAKYLNQITVGM--IVGIKNAKLTQFNGHSLSFGYSSEIVL 437
Query: 435 NPDFAEAHE-LREWF-DSGGKNAATVSISREIAAGGAKNEIHKTVS-----QIKNEGLGR 487
+P + +E R+W + G N A+++ R G + N+ ++ I+ E
Sbjct: 438 DPRHLDQYEGFRQWIAHNSGTNCASLT-QRSTFTGNSTNKDAPVLTVAELLAIQTEPFDA 496
Query: 488 SEKPDWVTVR------AFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQE 541
+ P+ V AF I D+ + G C KKV G +C E
Sbjct: 497 NNNPNQYVVHGTIRRGAFAKEISRDNGPTVSTCWYEGCAGCFKKV--CGGLPKC-----E 549
Query: 542 IDECDYRYLLQAQIQDQTG-LTWVTAFQESGEEILG 576
+ L +I D TG L+ V FQ ILG
Sbjct: 550 APRMTNIWKLPIKIADDTGTLSNVDLFQSIALPILG 585
>gi|82594604|ref|XP_725495.1| replication protein A large subunit [Plasmodium yoelii yoelii
17XNL]
gi|23480523|gb|EAA17060.1| replication protein A large subunit, putative [Plasmodium yoelii
yoelii]
Length = 487
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/483 (21%), Positives = 203/483 (42%), Gaps = 75/483 (15%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
+ I+ + Y +W IKA+V K L + N + FS D+ D G I + +
Sbjct: 7 LFRISQITTYVSKWIIKAKVVNKSKLSTFKN---NNSFFSIDITDVHGDSISCKFWGSSA 63
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D+++ IE+ +VY+ SKG + A +N +K+++E+ S + ++ + ++ S
Sbjct: 64 DKWFNNIELKKVYIFSKGRVSIANPKYNTVKHKYELTFNEDSEIHEVKDDGEIKIQKNIS 123
Query: 328 FRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
++ +I+ A + D+IGIV + P + K G + ++ + + D + S E++
Sbjct: 124 LVNLRDIKIATKETPFTADLIGIVKHICPPNNLKTKQGNDIIKQNIIIVDDTKHSFEISF 183
Query: 386 WGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF--INPDFAE-AH 442
W N + L+E ++ F +S+++ ND + G S + +N + E
Sbjct: 184 WDSNVNLIEKDLKEN-EIYIFTNISIRNW--NDMKNGTFGVTSSIEKVENLNDELKEKCL 240
Query: 443 ELREWFDSGG--------KNAATVSISREIAAGGAKNEIHKTVSQIKNEG--LGRSEKPD 492
+ EW+++ G KN + + + A ++++ +++I +GR ++
Sbjct: 241 GISEWYNNNGKYEQFTNMKNILSNDVIQTPDKHYALSDVNDVLTKISGTYTLVGRIKRIY 300
Query: 493 WVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNR-------------------W 533
W + F Y AC +C KK+ SG +
Sbjct: 301 WKSKE------NEHRFYYPACT------KCKKKLLSSGQDNTQGGDYDNSNFNNEENCVY 348
Query: 534 QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL---------YM 584
C C++ + Y Y D +G + AF + G +LG A+EL Y+
Sbjct: 349 SCMNCDENNVKPFYNYTFNFLFMDFSGSITLRAFSDEGFNLLGKKAEELKGLDEDSLDYL 408
Query: 585 LKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
Y+ ++ +Y +++ +++Y +RV T +R YS S YLL
Sbjct: 409 FNYDF-------------LYKEYKVVVRVSQKIYNGIERVNFTAMRIFPQKYSDIS-YLL 454
Query: 645 DLI 647
+ I
Sbjct: 455 NEI 457
>gi|389582888|dbj|GAB65624.1| replication factor A-related protein [Plasmodium cynomolgi strain
B]
Length = 485
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 208/479 (43%), Gaps = 60/479 (12%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
+ I+ + Y +W IKA+V K L + N + FS D+ D G I + +
Sbjct: 7 LFRISQITTYVSKWIIKAKVVNKSKLSTFKN---NNSFFSIDVTDVHGDSISCKFWGSAA 63
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D+++ IE+ +VY+ SKG + A +N +K+++E+ S + ++ + +++ S
Sbjct: 64 DKWFNNIELKKVYIFSKGRVSIANPKYNTVKHKYELTFNEDSEIHEVKDDGEIKIQKKIS 123
Query: 328 FRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
++ +I+ A + D+IGIV + + K G + ++ + + D + S E+
Sbjct: 124 LVNLRDIKIATKETPFTADLIGIVKHIGTISNLKTKQGNDITKQNIIIVDDTKHSFEIAF 183
Query: 386 WGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF--INPDF-AEAH 442
W N +++E ++ F +S+++ ND + G S + +N + A+
Sbjct: 184 WDSNVNLIKDEIKEN-EIYVFTNISIRNW--NDMKNGTFGVTSSIEKIENLNEELKAKCT 240
Query: 443 ELREWFDSGGK--------NAATVSISREIAAGGAKNEIHKTVSQIKNEG--LGRSEKPD 492
+ EW+++ GK N + +S+ A ++++ +++I +GR ++
Sbjct: 241 MISEWYNTNGKYEQFTNMRNILSNDVSQIPDKHYALSDVNDVLAKISGTYTLVGRIKRIY 300
Query: 493 WVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNR------------------WQ 534
W + F Y AC +C KK+ SG +
Sbjct: 301 WKSKE------NEHRFYYPACT------KCKKKLLSSGQDNAPDNDYETNANDEESIVYS 348
Query: 535 CDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVR 594
C C++ + Y Y D +G + AF + G +LG A+EL L + D +
Sbjct: 349 CMNCDENNVKPFYNYTFNFLFMDFSGSITLRAFSDEGYNLLGKKAEELKSLDEDTLDYLF 408
Query: 595 FGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLD----LISK 649
+ + + +Y +++ +++Y +RV T +R +S S YLL+ LISK
Sbjct: 409 NYDFL----YKEYKVVVRVNQKVYNGIERVNFTAMRIFPQKHSDIS-YLLNEIQLLISK 462
>gi|237831865|ref|XP_002365230.1| hypothetical protein TGME49_060570 [Toxoplasma gondii ME49]
gi|211962894|gb|EEA98089.1| hypothetical protein TGME49_060570 [Toxoplasma gondii ME49]
Length = 410
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 117/204 (57%), Gaps = 10/204 (4%)
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
GEIR + F V ++ +EVGRVY S+G++ A K +N L +E+EI + + + +
Sbjct: 52 GEIRASFFGRVAATWHPRLEVGRVYQFSRGTIDTANKKYNSLSHEYEIKFDDRAVI-VEM 110
Query: 316 EEDDSIPKQQFS-FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGM-ETQRRILNL 373
++D SIP Q FS + + + + S+VDVIG V S + +L +N E +R+ L++
Sbjct: 111 DDDPSIPAQIFSPLKLATLTDDSLVGSVVDVIGFVTSFCETHSVLARNTKDEVRRKELSI 170
Query: 374 KDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGTIPSTQL 432
D SG +V +TLW + L++ V + P+L++K+ +V++++GK S+ + + +
Sbjct: 171 VDDSGAAVTVTLW----EQHATALKDSV-LAERPLLAIKAVRVSEYAGKVSLTSTSRSVI 225
Query: 433 FINPD-FAEAHELREWFDSGGKNA 455
++P EA L W+++ G+ A
Sbjct: 226 LVDPHGLEEADLLAAWWEAEGEKA 249
>gi|221054360|ref|XP_002258319.1| replication protein a large subunit [Plasmodium knowlesi strain H]
gi|193808388|emb|CAQ39091.1| replication protein a large subunit, putative [Plasmodium knowlesi
strain H]
Length = 493
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 106/484 (21%), Positives = 203/484 (41%), Gaps = 70/484 (14%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
+ I+ + Y +W IKA+V K L + N + FS D+ D G I + +
Sbjct: 15 LFRISQITTYVSKWIIKAKVVNKTKLSTFKN---NNSFFSIDVTDVHGDSISCKFWGSSA 71
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D+++ IE+ +VY+ SKG + A +N +K+++E+ S + ++ + +++ S
Sbjct: 72 DKWFNNIEMKKVYIFSKGRVSIANPKYNTVKHKYELTFNEDSEIHEVKDDGEIKIQKKIS 131
Query: 328 FRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
++ +I+ A + D+IGIV + + K G + ++ + + D + S E+
Sbjct: 132 LVNLRDIKIATKETPFTADLIGIVKHIGTVSNLKTKQGNDIAKQNIIIVDDTKHSFEIAF 191
Query: 386 WGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF--INPDF-AEAH 442
W N +++E ++ F +++++ ND + G S + +N + A+
Sbjct: 192 WDSNVNLIKDEIKEN-EIYIFTNINIRNW--NDMKNGTFGVTSSIEKIENLNEELKAKCT 248
Query: 443 ELREWFDSGGKNAATVSISREIAAGGAKN--EIHKTVSQIKNEGLGRSEKPDWVTVRAFI 500
+ EW+++ GK ++ R I + E H +S + N+ L + + R
Sbjct: 249 MISEWYNTNGKYEQFTNM-RNILSNDVSQIPEKHYALSDV-NDVLAKISGTYTLVGRVKR 306
Query: 501 TFIKSDS----FCYTACPLMIGDRQCNKKVTQSGNR------------------WQCDRC 538
+ KS F Y AC +C KK+ SG + C C
Sbjct: 307 IYWKSKENEHRFYYPACS------KCKKKLLSSGQENVTDNDYETNANDEEGIVYSCMNC 360
Query: 539 NQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL---------YMLKYEL 589
++ + Y Y D +G + F + G +LG A+EL Y+ Y+
Sbjct: 361 DENNVKPYYNYTFNFLFMDFSGSMNIRVFSDEGYNLLGKKAEELKGLDEDNLNYLFNYDF 420
Query: 590 QDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLD---- 645
++ +Y +++ + LY +RV T I+ +S S YLL+
Sbjct: 421 -------------LYKEYKVVVRVNQRLYNGIERVNFTAIKIFPQKHSDIS-YLLNEIQL 466
Query: 646 LISK 649
LISK
Sbjct: 467 LISK 470
>gi|221506608|gb|EEE32225.1| replication factor, putative [Toxoplasma gondii VEG]
Length = 410
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 117/204 (57%), Gaps = 10/204 (4%)
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
GEIR + F V ++ +EVGRVY S+G++ A K +N L +E+EI + + + +
Sbjct: 52 GEIRASFFGRVAATWHPRLEVGRVYQFSRGTIDTANKKYNSLSHEYEIKFDDRAVI-VEM 110
Query: 316 EEDDSIPKQQFS-FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGM-ETQRRILNL 373
++D SIP Q FS + + + + S+VDVIG V S + +L +N E +R+ L++
Sbjct: 111 DDDPSIPAQIFSPLKLATLTDDSLVGSVVDVIGFVTSFCETHSVLARNTKDEVRRKELSI 170
Query: 374 KDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGTIPSTQL 432
D SG +V +TLW + L++ V + P+L++K+ +V++++GK S+ + + +
Sbjct: 171 VDDSGAAVTVTLW----EQHATALKDSV-LAERPLLAIKAVRVSEYAGKVSLTSTSRSVI 225
Query: 433 FINPD-FAEAHELREWFDSGGKNA 455
++P EA L W+++ G+ A
Sbjct: 226 LVDPHGLEEADLLAAWWEAEGEKA 249
>gi|321465251|gb|EFX76253.1| hypothetical protein DAPPUDRAFT_249126 [Daphnia pulex]
Length = 182
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 92/162 (56%), Gaps = 10/162 (6%)
Query: 275 EVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEI 334
+G+VY IS+ LK A K ++ +KN++E+ +TV C +E IP F+F I+++
Sbjct: 28 HIGKVYYISQAKLKAANKQYSKIKNDYEMTFNKNTTVYTC-DEATKIPPITFNFLPIAQL 86
Query: 335 ESAENNSIVDVIGIVISVNPSVPILRKNG-METQRRILNLKDTSGRSVELTLWGDFCNKE 393
+ + +S++DVIG+V S I K E + R + + D++ V LTLWG
Sbjct: 87 PNMDKDSVIDVIGVVKSAKDVRCITSKTTKTELKLREVQMVDSTNAEVNLTLWG------ 140
Query: 394 GQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFIN 435
KL E D PV+++K K++DF G+S+GT+ ST + +N
Sbjct: 141 --KLAEEFDATSKPVVALKGAKLSDFGGRSLGTVSSTVVQLN 180
>gi|302780169|ref|XP_002971859.1| hypothetical protein SELMODRAFT_412540 [Selaginella moellendorffii]
gi|300160158|gb|EFJ26776.1| hypothetical protein SELMODRAFT_412540 [Selaginella moellendorffii]
Length = 300
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 138/311 (44%), Gaps = 45/311 (14%)
Query: 317 EDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDT 376
+D PK + I E+ E ++ VDV+G+V V + + +G +RR L L D
Sbjct: 8 DDVGFPKIVLDRKTILEVSEMEPDTFVDVVGVVTLVGLTNVTCKDSGTLIKRRTLCLGDE 67
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP 436
SGRS+++ LW +EG K+ E + G L VK V T+ ST FI+
Sbjct: 68 SGRSIDVCLWDSKAEEEGSKIYEKFERGEKQFLCVKGEIVASVRAWYSVTLDSTS-FIHV 126
Query: 437 DFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTV 496
S G N A + T+S++ L E D +
Sbjct: 127 T-----------GSSGSNLAVRT---------------TTISEMMGLNLKVMESSDTYRI 160
Query: 497 RAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQ 556
A I I+ D+F Y AC ++ RQC KKV+ + EI E D++Y L I+
Sbjct: 161 TANIRDIRIDNFSYPACTRVVNGRQCGKKVSSA-----------EIQEVDHKYALHVCIE 209
Query: 557 DQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFG-EIIRSRVFNQYLFRLKIK- 614
D + W AFQE+ E++G PA++ ++ E D + +RS+V+ + R+ ++
Sbjct: 210 DSSQYVWAIAFQEAARELVGLPAQDFASMRDENYDVFSAHLDAVRSKVYTLKINRIAMQG 269
Query: 615 -----EELYGD 620
E+LY D
Sbjct: 270 ALDFVEKLYVD 280
>gi|156097108|ref|XP_001614587.1| replication factor A-related protein [Plasmodium vivax Sal-1]
gi|148803461|gb|EDL44860.1| replication factor A-related protein, putative [Plasmodium vivax]
Length = 485
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 104/488 (21%), Positives = 207/488 (42%), Gaps = 78/488 (15%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
+ I+ + Y +W IKA+V K L + N + FS D+ D G I + +
Sbjct: 7 LFRISQITTYVSKWIIKAKVVNKSKLSTFKN---NNSFFSIDVTDVHGDSISCKFWGSAA 63
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D+++ IE+ +VY+ SKG + A +N +K+++E+ S + ++ + +++ S
Sbjct: 64 DKWFNNIELKKVYIFSKGRVSIANPKYNTVKHKYELTFNEDSEIHEVKDDGEIKIQKKIS 123
Query: 328 FRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
++ +I+ A + D+IGIV + + K G + ++ + + D + S E+
Sbjct: 124 LVNLRDIKIATKETPFTADLIGIVKHIGTISNLKTKQGNDITKQNIIIVDDTKHSFEIAF 183
Query: 386 WGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF--INPDF-AEAH 442
W N +++E ++ F +S+++ ND + G S + +N + A+
Sbjct: 184 WDSNVNLIRDEIKEN-EIYIFTNISIRNW--NDMKNGTFGVTSSIEKIENLNEELKAKCT 240
Query: 443 ELREWFDSGGK--------NAATVSISREIAAGGAKNEIHKTVSQIKNEG--LGRSEKPD 492
+ EW+++ GK N + +S+ A ++++ +++I +GR ++
Sbjct: 241 MISEWYNTNGKYEQFTNMRNILSNDVSQIPDKHYALSDVNDVLAKISGTYTLVGRIKRIY 300
Query: 493 WVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNR------------------WQ 534
W + F Y AC +C KK+ SG +
Sbjct: 301 WKSKE------NEHRFYYPACT------KCKKKLLSSGQDNATDNDYETNANDEESIVYS 348
Query: 535 CDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL---------YML 585
C C++ + Y Y D +G + AF + G +LG A+EL Y+
Sbjct: 349 CMNCDENNVKPFYNYTFNFLFMDFSGSITLRAFSDEGYNLLGKKAEELKGLDEDTLDYLF 408
Query: 586 KYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLD 645
Y+ ++ +Y +++ +++Y +RV T +R +S S YLL+
Sbjct: 409 NYDF-------------LYKEYKVVVRVNQKVYNGIERVNFTAMRIFPQKHSDIS-YLLN 454
Query: 646 ----LISK 649
LISK
Sbjct: 455 EIQLLISK 462
>gi|124506649|ref|XP_001351922.1| replication factor A-related protein, putative [Plasmodium
falciparum 3D7]
gi|23504949|emb|CAD51733.1| replication factor A-related protein, putative [Plasmodium
falciparum 3D7]
Length = 484
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 92/455 (20%), Positives = 198/455 (43%), Gaps = 55/455 (12%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
+ I+ + Y +W IKA+V K L + N + FS D+ D G I + +
Sbjct: 7 LFRISQITTYVSKWIIKAKVVNKTKLSTFKN---NNSFFSIDVTDVHGDSISCKFWGSSA 63
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D+++ +IE+ +VY+ SKG + A +N +K+++E+ S + ++ + +++ S
Sbjct: 64 DKWFNVIELKKVYIFSKGRVSIANPKYNTVKHKYELTFNEDSEIHEVKDDGEIKIQKKIS 123
Query: 328 FRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
++ +I+ A + D+IGIV + + K G + ++ + + D + S E++
Sbjct: 124 LVNLRDIKIATKETPFTADLIGIVKHIGTVSNLKTKQGNDIAKQNIIIVDDTKHSFEISF 183
Query: 386 WGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF--INPDF-AEAH 442
W N +++ E ++ F +++++ ND + G S + +N + A+
Sbjct: 184 WDSNVNLIKEEIVEN-EIYIFTNINIRNW--NDMKNGTFGVTSSIEKMENLNDELKAKCA 240
Query: 443 ELREWFDSGGKNAATVSISREIAAGGAKN--EIHKTVSQIKN---------EGLGRSEKP 491
++ +W+++ GK ++ R I + + H ++S + + +GR ++
Sbjct: 241 KISQWYNNSGKYEQFTNM-RNILSNDVTQTPDKHYSISDVSDVLSKISGTYTLIGRIKRI 299
Query: 492 DWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNR----------------WQC 535
W + F Y AC +C KK+ SG+ + C
Sbjct: 300 YWKSKE------NEHRFYYPAC------MKCKKKLLSSGHDNNMDNEFDNPEEDNIVYSC 347
Query: 536 DRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRF 595
C++ + Y Y D +G + AF + G +LG A+EL L + D +
Sbjct: 348 MNCDENNVKPFYNYTFNFLFMDFSGSIILRAFSDEGYNLLGKKAEELKNLDEDTLDYLFN 407
Query: 596 GEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIR 630
+ + + +Y +++ ++ Y +RV T ++
Sbjct: 408 YDFL----YKEYKIVVRVNQKAYNGIERVNFTAMK 438
>gi|391333842|ref|XP_003741319.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 269
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 24/247 (9%)
Query: 223 IKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLI 282
I+ RV +K LR + A +GK+F+F+L D + GEI + + + I +G Y I
Sbjct: 36 IEGRVISKSPLREWKKADAEGKLFTFNLTD-NSGEISCIVSGELAEVLFPTISIGSCYEI 94
Query: 283 SKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSI 342
S KP+ ++ + EI L + + E D +PK+ S ISEI ENN
Sbjct: 95 SGFRPKPSHPQYSTTSHSCEIQLSKITRIKKI--EGDFLPKKPQSLIKISEILDIENNKS 152
Query: 343 VDVIGIVISVN-PSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD----FCNKEGQKL 397
VD+I IV V P + R M ++ +L L D S R+V L LWG+ KEG
Sbjct: 153 VDLIAIVYDVMIPQMLACRDGQMREKQNVL-LVDDSMRTVSLGLWGESIRTLDGKEGH-- 209
Query: 398 QEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF--INPDFA-EAHELREWFDSGGKN 454
V+++++ V +++GK + + S + D E EL +W+D G +
Sbjct: 210 ----------VINIRAAAVKEYNGKKLLSTSSASILKHCESDLTREEQELADWWDREGHS 259
Query: 455 AATVSIS 461
+ ++S
Sbjct: 260 SEFAALS 266
>gi|156312429|ref|XP_001617826.1| hypothetical protein NEMVEDRAFT_v1g225758 [Nematostella vectensis]
gi|156195990|gb|EDO25726.1| predicted protein [Nematostella vectensis]
Length = 115
Score = 92.4 bits (228), Expect = 6e-16, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 66/112 (58%), Gaps = 4/112 (3%)
Query: 475 KTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQ 534
K +SQIKNE LG EK D+++V+ + + ++ Y ACP +CNKKV + + +
Sbjct: 6 KFLSQIKNEQLGMGEKADYISVKGVCVYFRRENCMYKACP----SEECNKKVIEEDSGFY 61
Query: 535 CDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLK 586
C++C ++ YR +L A + D TG WVT FQES E +LG A +L +K
Sbjct: 62 CEKCGRKYPNYKYRLILSAHLADFTGSQWVTCFQESAEALLGRSASDLGQMK 113
>gi|240848761|ref|NP_001155514.1| replication protein A 70 kDa DNA-binding subunit-like
[Acyrthosiphon pisum]
gi|239792426|dbj|BAH72558.1| ACYPI003269 [Acyrthosiphon pisum]
Length = 325
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 119/250 (47%), Gaps = 26/250 (10%)
Query: 221 WAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
W+I ARV K ++ Y RG GK F+ L+D EIR F DR + ++ VY
Sbjct: 17 WSITARVLKKSNVLPYQKERGTGKYFTAILIDK-TTEIRAKAFGDDCDRLFSQLQENNVY 75
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENN 340
I G ++ A K +N KN++EI T+ + D IP + I + S + N
Sbjct: 76 NIKNGQIQLADKKYNKSKNDYEIIFNETTIIIQKFGVTD-IPSHP-QLKTIENVFSMDQN 133
Query: 341 SIVDVIGIVISVNPSVPILRKNGMETQR-RILNLKDTSGRSVELTLWG----DFCNKEGQ 395
+++D IG++I + S I + N +T + R + L D + RSV +TLW +F EG
Sbjct: 134 TLIDTIGVIIEIEQSKEIKKNNSNDTYKLRNIILADCT-RSVTVTLWDIDATNFNANEG- 191
Query: 396 KLQEMVDVGFFPVLSVKSGKVNDFSG-KSIGTIPSTQLFINPDFAEAHELREWFDSGGK- 453
++S+ GK+ ++ I S+++ INP + E +L+ W+ K
Sbjct: 192 -----------DIMSIMGGKIINYKNVNKISVTGSSEIIINPYWNETFDLQIWYKEFEKK 240
Query: 454 ---NAATVSI 460
N + VSI
Sbjct: 241 KLLNLSQVSI 250
>gi|15219131|ref|NP_175703.1| Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana]
gi|12324642|gb|AAG52278.1|AC019018_15 putative replication protein; 94555-97079 [Arabidopsis thaliana]
gi|332194750|gb|AEE32871.1| Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana]
Length = 566
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 181/421 (42%), Gaps = 31/421 (7%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNN-ARGDGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
I L P++ W I+ ++ L +N+ +G G + L D DG +I+ + +
Sbjct: 10 IKNLKPFKTSWCIQVKI-----LHAWNHYTKGSGMSYEMMLADEDGNKIQAGIKKEHLLK 64
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFR 329
+++G +I + S+ A + + + I +++++ D I +F
Sbjct: 65 LQRYVKIGHWTIIEEFSVTKASGLYRSTTHPYRINIQSSTRFSNSPTISDEIWLDLVNFN 124
Query: 330 HISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDF 389
+ + + N +V+VIG +++V + +L G T++ L+DT + +LWG F
Sbjct: 125 DVLS-GTLDQNKLVNVIGQLVNVG-EIQLLDVQGKPTKKIDFQLRDTDDNRLPCSLWGKF 182
Query: 390 CNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIP----STQLFINPDFAEAHELR 445
++ + +E VG + ++ K+ + K I +I ++++FINP E E +
Sbjct: 183 ADQIHKVSKE--SVGGIVICLIRWAKLGHY--KEIRSISNAFDASEVFINPILTEVEEFK 238
Query: 446 EWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKS 505
S G + + E K + L S + + V + I I
Sbjct: 239 NLLPSDGLALTIMEPKPRFQPLRVREERSKQFERKTIAELKASFEVEKVKIICSILSIDL 298
Query: 506 DSFCYTACPLMIGDRQCNKKVTQSGNR---------WQCDRCNQEIDECDYRYLLQAQIQ 556
D Y + +CNKKV +S ++CD+C ++ + RY L I
Sbjct: 299 DYSWYYYAHI-----KCNKKVFKSKKTLSSGAKKIIYRCDKCATDVTSIEARYWLHLDIM 353
Query: 557 DQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVR-FGEIIRSRVFNQYLFRLKIKE 615
D TG + + F E I+GCPA EL + E D+ + +++++ + Y F + +++
Sbjct: 354 DNTGESKLMLFDSFVEPIIGCPATELLDVTNEQIDEPQPLPDVVKNIIGKTYQFLVCVEQ 413
Query: 616 E 616
+
Sbjct: 414 D 414
>gi|442751523|gb|JAA67921.1| Hypothetical protein [Ixodes ricinus]
Length = 151
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 90/157 (57%), Gaps = 16/157 (10%)
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP 436
SG+ V TLWG+ +K Q PV+++K +V+DF G+S+ + S+ + +NP
Sbjct: 4 SGKVVSATLWGEDADKFDGSRQ--------PVMAIKGARVSDFGGRSLSVLSSSTVIVNP 55
Query: 437 DFAEAHELREWFDSGGK--NAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWV 494
D EA++LR WFDS G+ + A++S R G A N KT+ ++K+E LG+ +K D+
Sbjct: 56 DIPEAYKLRGWFDSEGQALDGASISDLRSGGTGSATN--WKTLYEVKSENLGQGDKADYF 113
Query: 495 TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN 531
+ A + +++ ++ Y ACP + CNKKV N
Sbjct: 114 SCVATVVYLRKENSMYQACPT----QDCNKKVIDQQN 146
>gi|330798256|ref|XP_003287170.1| hypothetical protein DICPUDRAFT_94345 [Dictyostelium purpureum]
gi|325082822|gb|EGC36292.1| hypothetical protein DICPUDRAFT_94345 [Dictyostelium purpureum]
Length = 650
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 134/281 (47%), Gaps = 37/281 (13%)
Query: 156 PGSFSTP--NSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAA 213
P STP N+ P+ GS+ P+QP + P ++ + + IA
Sbjct: 157 PNLTSTPTKNNNFIPKPSQGSL----------PFQPQQKYTKPQPDSESVLRSHVSDIAD 206
Query: 214 LNPYQGRWAIKARVTAKGDLRRYNNARGD--GKVFSFDLLDSDGGEIRVTCFNA------ 265
+N + IKA V + + +N GD G++FS L DS G I+ TCF++
Sbjct: 207 INEHSKEITIKAMVMERMPRKSWNKG-GDNSGELFSVILQDSTGS-IKATCFSSKSNPLP 264
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQ 325
D YE++E +V+ I K A K+F+ L +++EI A++ + EE D
Sbjct: 265 AFDDLYEMLEKKKVFKIQGFYAKKANKDFSRLPHDYEITFNASTAIVPVDEEMDIF---- 320
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
+ FR+I ++ + E + DVIG+V N + KN + + +N+ DT+G +E+
Sbjct: 321 YDFRNIEDLSNVETGTTCDVIGVVSDCNLNQRFTSKNNKQLVKSSININDTTG-IIEVIF 379
Query: 386 WGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVN-DFSGKSIG 425
W + + +DV ++++K+ KVN +F+ KS+
Sbjct: 380 WNEAAD---------IDVKDGDIIAIKNAKVNTNFNNKSLS 411
>gi|402073226|gb|EJT68830.1| hypothetical protein GGTG_13608 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 230
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Query: 206 ARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
A + PI +++PYQ +WAIKARVT+K D+R ++ GK+FS +LLD + GEI+ T FN
Sbjct: 119 AVVYPIESISPYQHKWAIKARVTSKSDIRTWHKPSEKGKLFSVNLLD-ETGEIKATGFNN 177
Query: 266 VVDRFYEIIEVGRVYLISKGS-LKPAQKNFNHLKNEWEI 303
D+FYE+++ +VY IS ++ A+K F +L N++E+
Sbjct: 178 ECDKFYELLQENQVYYISSPCRVQMAKKQFTNLPNDYEL 216
>gi|190688744|gb|ACE86407.1| putative replication protein [Sorghum bicolor]
Length = 213
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 69/104 (66%), Gaps = 3/104 (2%)
Query: 550 LLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLF 609
LL QIQD TG+T+ TAFQ +GE I G A+EL+M++ QDD+RF EI+++ + +YLF
Sbjct: 44 LLLCQIQDHTGVTYATAFQAAGEAIFGHTAQELFMIQNVEQDDMRFTEIMQAVLRREYLF 103
Query: 610 RLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISKSFRK 653
+LKI EE Y EQRV ++I +++ E+ LL +S+ K
Sbjct: 104 KLKIYEETYNGEQRVICSIIGVEKLE---ETNNLLKDVSRPILK 144
>gi|326511146|dbj|BAJ87587.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 940
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 79/138 (57%), Gaps = 15/138 (10%)
Query: 2 PVNLTPNSISLI---NGGDVNSKPLVQVMDIKLI-----------GSTQERYRFLISDSV 47
P LTP ++ I G +P++QV D++ + ER+R L+SD V
Sbjct: 4 PPPLTPGAVMEIWELPNGPARFQPVLQVADLRPVVAKNTTAAAAAAQHSERFRMLLSDGV 63
Query: 48 STQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNP 107
+Q +ML T LND +K G ++ GS+V L D C+T+Q R+I++V+ +E + +C IG P
Sbjct: 64 HSQQSMLGTGLNDLIKDGTLRVGSIVHLTDMTCNTIQKRRIVIVVKLEVLQSECAKIGTP 123
Query: 108 KIFSESELTAQK-TIPSN 124
K++ +S Q+ ++P+N
Sbjct: 124 KVYEKSLPEGQEPSLPAN 141
>gi|238585702|ref|XP_002390945.1| hypothetical protein MPER_09698 [Moniliophthora perniciosa FA553]
gi|215454988|gb|EEB91875.1| hypothetical protein MPER_09698 [Moniliophthora perniciosa FA553]
Length = 175
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
+ PI LNPYQ W IKARVT K D++ +N G GK F L+D + GEIR T FNAV
Sbjct: 60 VDPIQTLNPYQNNWTIKARVTRKSDMKARSNQYGVGKSFYVTLMD-ESGEIRGTAFNAVA 118
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLC 314
D Y ++ G+ Y ISK + A + + +++E++LE + ++ C
Sbjct: 119 DDLYGRLDEGKAYYISKAEVILASDKVSDVSSDYELWLERNTEIEEC 165
>gi|440301626|gb|ELP94012.1| replication factor A 1, rfa1, putative [Entamoeba invadens IP1]
Length = 460
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 145/327 (44%), Gaps = 32/327 (9%)
Query: 204 APARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCF 263
+ A+I P A L Q + IK RV +K D +Y G +F+F L D +GGE+R T F
Sbjct: 143 SKAKITPFAMLTAMQNKSTIKGRVISKQDKFKY----AKGNLFNFVLQDKEGGELRATAF 198
Query: 264 NAVVDRFYEIIEVGRVYLISKGSLK-PAQKNFNHLKN-EWEIFLEATSTVDLCTEEDDSI 321
N + D Y+ I+VG Y ISKG K P KN+ K + ++ + +TV +E +I
Sbjct: 199 NDMCDALYDTIQVGSTYYISKGEFKVPTNKNYRSAKMIDVDMVVGRYTTVQKAEDELPAI 258
Query: 322 PKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSV 381
S IS++ ++ +S+ D+ G+++ V + KN + RR + + D + V
Sbjct: 259 S----SITAISDLLTSPVDSLYDICGVLVQVKDEDHL--KN--DKIRRSILVADQTKHVV 310
Query: 382 ELTLWGDFCNKEGQKLQEMVDVGFFPV-LSVKSGKVNDFSGKSIGTIPSTQLFINPDFAE 440
+ WG+ ++L+ + F V L + ++S +S I Q+ + E
Sbjct: 311 SINFWGEDA-AIPERLEPLKTYVFRQVQLREFRTRNMNYSSRSSSIIEGEQI---AKYDE 366
Query: 441 AHELREWFDSGGKNAATVSISREI-----------AAGGAKNEIHKTVSQIK-NEGLGRS 488
+ + D + R + G K E K K NE + S
Sbjct: 367 TSLVHKMLDESKTSTGEYVFDRPTFIYLDETTTADSVQGTKTEQSKLFKLSKFNEAVLAS 426
Query: 489 EKPDWVTVRAFITFIKSDS-FCYTACP 514
E+ V A+ T K+DS F Y +CP
Sbjct: 427 EEDIKGNVYAYFTSFKTDSTFYYVSCP 453
>gi|340387334|ref|XP_003392162.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Amphimedon queenslandica]
Length = 91
Score = 89.0 bits (219), Expect = 7e-15, Method: Composition-based stats.
Identities = 42/92 (45%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Query: 221 WAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
W IKARVT+K LR YNN+RG+G++ + + +D G EIR T FN DRF+ +EV +VY
Sbjct: 1 WTIKARVTSKPPLRHYNNSRGEGRILTLEFVDHSG-EIRATAFNEDADRFFPNVEVNKVY 59
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVD 312
+S+G +KPA K + + N++E+ L A +T++
Sbjct: 60 YVSRGRIKPANKIY-YANNDYELTLGAETTIE 90
>gi|348670089|gb|EGZ09911.1| hypothetical protein PHYSODRAFT_305275 [Phytophthora sojae]
Length = 441
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 116/242 (47%), Gaps = 35/242 (14%)
Query: 210 PIAALNPYQG-RWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
PI L+P G +W + AR+ +R+++NA G G + +L DG
Sbjct: 5 PIRDLSPVLGVQWEVVARIAFLSPVRQWSNANGRGHNLAT-ILRGDG------------- 50
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
V+L + G ++ A + F + +EI L ++++V E+DDSI ++F
Sbjct: 51 ----------VFLFAGGRIRKAARGFGKPNHTYEIGLSSSASV-TPVEDDDSIEHVDYAF 99
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTLWG 387
IS++ A+ ++ VD++ +++ V ++ RK+G++ +R L L D+S + TLW
Sbjct: 100 TTISDLAHADAHAQVDILAMIMDVGVLDKVVDRKDGVQVKRE-LKLTDSSNVEIVCTLWN 158
Query: 388 DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREW 447
F + + + VN+F G+S+ T+ T + NP+ + L+EW
Sbjct: 159 KFAEVD-------YTAALHQPYAFRQVMVNEFRGRSLSTLSYTMVVPNPNLPDVITLQEW 211
Query: 448 FD 449
FD
Sbjct: 212 FD 213
>gi|351700393|gb|EHB03312.1| Replication protein A 70 kDa DNA-binding subunit [Heterocephalus
glaber]
Length = 162
Score = 87.8 bits (216), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 8/166 (4%)
Query: 458 VSISREIAAG-GAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLM 516
VSIS + G GA N KT+ ++K+E LG+ +K D+ + A + ++ ++ Y AC
Sbjct: 2 VSISDLKSWGLGASNNNWKTLYEVKSENLGQGDKADYFSSVATVVYLHKENCMYLAC--- 58
Query: 517 IGDRQCNKKVT-QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEIL 575
+ CNKKV Q + C++C+ E YR +L I D WVT FQES E IL
Sbjct: 59 -STQDCNKKVIDQQNGLYCCEKCDHEFPNFKYRMILLGNILDFQENQWVTCFQESAEAIL 117
Query: 576 GCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDE 621
G Y+ + + ++ F E ++ F ++F++++K E Y DE
Sbjct: 118 G--QNTAYLGELKEKNKQAFEEGFQNANFRSFMFKIRVKLETYNDE 161
>gi|348685631|gb|EGZ25446.1| hypothetical protein PHYSODRAFT_479463 [Phytophthora sojae]
Length = 263
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 115/246 (46%), Gaps = 14/246 (5%)
Query: 205 PARIIPIAALNP-YQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCF 263
P + IA NP + W+ R+ A+ +R + + R G++F + D D +RVT F
Sbjct: 16 PLPVFTIADFNPEIRAPWSFIGRILARSPVRTFKSWRASGRLFRVHVTDRDDATLRVTVF 75
Query: 264 NAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPK 323
N +RF++++ G V S G + A F + E+ + + T+ D P+
Sbjct: 76 NEGAERFFDVLSPGAVCSFSNGRITTANSVFAPPSSPIELSFGGDANIHRVTDGPD-YPE 134
Query: 324 QQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVEL 383
F++ ++++ +A V GIV+ V P I + G +T +R L D S V
Sbjct: 135 PAFAYIRLADLPAATPT----VSGIVVDVGPLRDITTRAGRKTLKREFLLVDDSNVDVVC 190
Query: 384 TLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG-KSIGTIPSTQLFINPDFAEAH 442
T WG ++ LQ P+L +++G+++D+ +S+ + L +P + +
Sbjct: 191 TAWGQDADELQDSLQGH------PIL-IQNGQISDYMNIRSVDIGVRSTLLHHPATSRSA 243
Query: 443 ELREWF 448
+L+ WF
Sbjct: 244 DLQRWF 249
>gi|440803406|gb|ELR24309.1| replication protein A1, putative, partial [Acanthamoeba castellanii
str. Neff]
Length = 1326
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 119/246 (48%), Gaps = 19/246 (7%)
Query: 208 IIPIAALNPYQGRWAIKARVT-AKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV 266
+ P++ALNP+ W I+ RV +L ++ +G+ F DL+D +G IR +NAV
Sbjct: 996 LTPVSALNPFSVAWTIEVRVVYLPTELFKWQKNGKEGRHFCCDLMDKNGDCIRAVAYNAV 1055
Query: 267 VDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEED--DSIPKQ 324
D + ++ ++Y IS G K A K ++ L +++++ T+ + T+ + P Q
Sbjct: 1056 ADDIFPRLKENQIYRISGGHFKVANKKYSKLSHDYDLTFATTTLIIPITDPTRIAAFPTQ 1115
Query: 325 QFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELT 384
Q F +S++ S E++ + +G + S+ R G +R + L+D + VELT
Sbjct: 1116 QPDFLPLSQLASREHDEV--AVGPLGSIT-----ARTTGNVIPKRSVFLEDQTRSIVELT 1168
Query: 385 LWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTI--PSTQLFINPD-FAEA 441
LW D K L + D VL+V VN F G + + S +L +N F +
Sbjct: 1169 LWYDDA-KNAATLFKNGD-----VLAVTGAWVNRFRGHTTLSTKHASYKLHVNSSAFPQT 1222
Query: 442 HELREW 447
L +W
Sbjct: 1223 AALVQW 1228
>gi|357484727|ref|XP_003612651.1| Replication factor A protein [Medicago truncatula]
gi|355513986|gb|AES95609.1| Replication factor A protein [Medicago truncatula]
Length = 477
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 158/356 (44%), Gaps = 38/356 (10%)
Query: 233 LRRYNNARGDGKVFSFDLLDSDGGEIRVT-CFNAVVDRFY-----EIIEVGRVYLISKGS 286
L + +NA D K+ ++RV C +A + R + ++++ G++Y+IS
Sbjct: 23 LNKLSNAAPDTKI-----------KVRVANCIHATIPRRFSPSLKKVLQEGKIYVISHYE 71
Query: 287 LKPAQKNFNHLKNEWEIF-LEATSTVDLCTEEDDSIPKQQFSFRHISE-IESAENNSIVD 344
+ ++ + ++N + + V +D++IP+ F F + ++ I+ + D
Sbjct: 72 VSKNKEKYAVVENNPSMLSFYGDAIVTEEGSDDNTIPRYIFEFVNFNDLIKRCGKEVLAD 131
Query: 345 VIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVG 404
VIG +I V+P NG + L+L D SG +++TLW D+ QKL + +
Sbjct: 132 VIGFIIDVDPIEEKTTVNG-KVDMLSLHLGDGSGNVLKVTLWDDYAPMFNQKLIDQMHAT 190
Query: 405 FFPVLSV-KSGKVNDFSGKS---IGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSI 460
P +++ S V + G + + ST ++IN D E +L S G+N S+
Sbjct: 191 PKPNVAIFTSTLVKQYQGNCELYVSSSRSTTIYINIDTPEVADL--ILSSKGEN----SV 244
Query: 461 SREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWV--TVRAFITFIKSDSFCYTACPLMIG 518
+ N KT+S++ + + + D V V + + Y +CP
Sbjct: 245 LKTTETLSLTNVDVKTISELLSMAVSGVYQGDVVYNCVATVDDILLKNGLYYVSCP---- 300
Query: 519 DRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEI 574
C K V+ + + C+ C +++D RY L+ Q+ D T T F E E++
Sbjct: 301 --HCRKTVSSTETDFNCEHCTKKVDYPKIRYRLELQVNDSTESTIFVLFAEVAEQL 354
>gi|145475015|ref|XP_001423530.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124390591|emb|CAK56132.1| unnamed protein product [Paramecium tetraurelia]
Length = 635
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 192/440 (43%), Gaps = 53/440 (12%)
Query: 207 RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGD--GKVFSFDLLDSDGGEIRVTCFN 264
+ I+ + P +W ++ R+ K + + + D + F +LD + I +
Sbjct: 215 ELTKISVMYPNMKKWVLEGRIILKSEQLDFRCKKTDMISRYFKIIILDCEQEIIVGLFYE 274
Query: 265 AVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLK----NEWEIFLEATSTVDLCTEEDDS 320
+ +F+ +++ G+VY G + Q N K NE+ I E+ ++ +
Sbjct: 275 KALSKFFSVLQQGKVYTFKNGCI--GQDKANGTKKITFNEYSIISES---------QNFA 323
Query: 321 IPKQ-QFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGR 379
IP Q +F + EIE+ ++NSIVDV+ ++ + K ++ + + T+
Sbjct: 324 IPSAPQLNFSTLQEIETLQHNSIVDVVAVIQEI--------KQDSDSCKSFIVFDQTTRL 375
Query: 380 SVELTLWG-DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDF 438
SV+ LWG + N QK + MV G K + + KS+ + T + N D
Sbjct: 376 SVK--LWGAQYANINLQKGEIMVFKGL---------KFYNTNFKSLNSDHQTMIIQNHDL 424
Query: 439 AEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRA 498
E +L+ W GKN T+ + ++ + V ++ NE G++++ + +
Sbjct: 425 NEVKQLKSWL--AGKNIDTIMKPNPDNSTIDLQQLDEFVIKLLNE--GKTQQTSYKYIFG 480
Query: 499 FITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNR--WQCDRCNQEIDECDYRYLLQAQIQ 556
+I ++ + Y CP + +C K+ + +R ++C +C E + ++L+ I
Sbjct: 481 YIIELQENRNMYPCCPSL----RCKSKMEEIPSRKTYRCKKCLTENPSPKFSFVLRVTIM 536
Query: 557 DQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEE 616
D+ F + ++LG A +L + +E Q + I S+ F Q +++I+ +
Sbjct: 537 DEFTNIKAVIFDDIAVKLLGITADQLRAMSHEDQRN-----IFLSKEFQQKKMKVQIQFQ 591
Query: 617 LYGDEQRVKITVIRADQVNY 636
Y + + K V ++Y
Sbjct: 592 DYNGQIQPKYNVQDIVDIDY 611
>gi|281210368|gb|EFA84534.1| putative ssDNA-binding protein [Polysphondylium pallidum PN500]
Length = 636
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 185/422 (43%), Gaps = 61/422 (14%)
Query: 222 AIKARVTAKGDLRRYNNARGDGKVFSFDLLDS--DGGEIRVTCF-----NAVVDRFYEII 274
I+A V AK +++++N+ G + + +L+D + EI+VT F N + + E I
Sbjct: 183 TIRATVRAKSTIKQWHNSNSGGSILNLELIDDSDEKNEIKVTIFGRNNENNLCVQIDEAI 242
Query: 275 EVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEI 334
VG Y S + P NFN L + E+ + + + ++ ++F I+++
Sbjct: 243 HVGSTYDFSNFKINPKNPNFNKLSHPCELTFTENTKYYVSSAPINA--HTLYNFVKIADL 300
Query: 335 ----ESAENNSIVDVIGIVISVNPSVPILRKNGMETQ-------RRILNLKDTSGRSVEL 383
+ N+ +D+ G V +V+ + I RK T + + DTS +S+++
Sbjct: 301 TPPAANETNSPPIDLFGYVSNVSGTTSINRKATSNTDNANSTLLKCTFRILDTSAKSIDV 360
Query: 384 TLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDF--AEA 441
T +G ++ + + + ++ G ++++KS K++ FS S S+ +NP E
Sbjct: 361 TAFG----QQAETISKQLNKG--NIIAIKSAKISSFSKCSASITYSSTYEVNPPQLQQEC 414
Query: 442 HELREWFDSGGKNAATVSISREIAAGGA--KNEIHKTVSQIKNEGLGRSE--KPDWVTVR 497
L W +S G +A +S S +A G + K+ I TV + LG ++V V
Sbjct: 415 QNLLMWVNSHGDDAECLSESY-VAGGNSDDKDSIRCTVEVLPQLNLGNDPILTKNYVVVG 473
Query: 498 AF-----ITFIKSDSFC-YTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLL 551
++ +D YT C C KK CN + Y Y
Sbjct: 474 TLSTLSNVSLTSNDQKSQYTGC------SACKKK-----------NCNCGQPQIKY-YRA 515
Query: 552 QAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRL 611
++QD+TG V AF + E++LG A+ + +L D+ R + + YL RL
Sbjct: 516 TFRLQDETGSVLVDAFSGTVEKMLGANAERFFD---QLTDEDRL-QRVNEICSVPYLVRL 571
Query: 612 KI 613
++
Sbjct: 572 RV 573
>gi|294943193|ref|XP_002783789.1| replication factor a 1, rfa1, putative [Perkinsus marinus ATCC
50983]
gi|239896511|gb|EER15585.1| replication factor a 1, rfa1, putative [Perkinsus marinus ATCC
50983]
Length = 117
Score = 85.9 bits (211), Expect = 7e-14, Method: Composition-based stats.
Identities = 41/85 (48%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 210 PIAALNPYQGR-WAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
PI ++ Y R W IKARVTAK +R + NARG G VFS DLLD +G EIR + FNA +
Sbjct: 6 PIREISSYSMRNWTIKARVTAKSPVRHFTNARGGGSVFSVDLLDKEGSEIRGSFFNAAAE 65
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKN 293
+F ++++ G+VY SKG++K +++
Sbjct: 66 KFDKLLQKGKVYTFSKGNVKIGKED 90
>gi|357473253|ref|XP_003606911.1| Replication factor A 51 kDa subunit [Medicago truncatula]
gi|357477581|ref|XP_003609076.1| Replication factor A 51 kDa subunit [Medicago truncatula]
gi|357477673|ref|XP_003609122.1| Replication factor A 51 kDa subunit [Medicago truncatula]
gi|355507966|gb|AES89108.1| Replication factor A 51 kDa subunit [Medicago truncatula]
gi|355510131|gb|AES91273.1| Replication factor A 51 kDa subunit [Medicago truncatula]
gi|355510177|gb|AES91319.1| Replication factor A 51 kDa subunit [Medicago truncatula]
Length = 502
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 146/326 (44%), Gaps = 26/326 (7%)
Query: 262 CFNAVVDRFY-----EIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIF-LEATSTVDLCT 315
C +A + R + ++++ G++Y+IS + ++ + ++N + + V
Sbjct: 74 CIHATIPRRFSPSLKKVLQEGKIYVISHFEVSKNKEKYAVVENNPSMLSFYGDAIVTEEG 133
Query: 316 EEDDSIPKQQFSFRHISE-IESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLK 374
+D++IP+ F F + ++ I+ + DVIG +I V+P NG + L+L
Sbjct: 134 SDDNTIPRYIFEFVNFNDLIKRCGKEVLADVIGFIIDVDPIEEKTTVNG-KVDMLSLHLG 192
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSV-KSGKVNDFSGKS---IGTIPST 430
D SG +++TLW D+ QKL + + P +++ S V + G + + ST
Sbjct: 193 DGSGNVLKVTLWDDYAPMFNQKLIDQMHATPKPNVAIFTSTLVKQYQGNCELYVSSSRST 252
Query: 431 QLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEK 490
++IN D E +L S GKN S+ + N KT+S++ + + +
Sbjct: 253 TIYINIDTPEVADL--ILSSKGKN----SVLKTTETLSLTNVDVKTISELLSMAVSGVYQ 306
Query: 491 PDWV--TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYR 548
D V V + + Y +CP C K V+ + + C+ C +++D R
Sbjct: 307 GDVVYNCVATVDDILLKNGLYYVSCP------HCRKTVSSTETDFNCEHCTKKVDYPKIR 360
Query: 549 YLLQAQIQDQTGLTWVTAFQESGEEI 574
Y L+ Q+ D T T F E E++
Sbjct: 361 YRLELQVNDSTESTIFVLFAEVAEQL 386
>gi|328726379|ref|XP_003248874.1| PREDICTED: replication factor A protein 1-like [Acyrthosiphon
pisum]
Length = 323
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 117/243 (48%), Gaps = 39/243 (16%)
Query: 221 WAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
W+I RV K + Y N RG GK F+ L+D EIR F DR + ++ VY
Sbjct: 17 WSITVRVLKKSNKISYQNERGTGKYFTTILIDK-TTEIRAKAFGDDCDRLFLQLQENNVY 75
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHI---SEIESA 337
I G ++ A K +N+ KN++EIF + T +I +QF F I ++++
Sbjct: 76 NIKNGKIQLADKEYNNSKNDYEIFFKET-----------TIIIEQFGFTDIPTHPQLKTI 124
Query: 338 EN------NSIVDVIGIVISVNPSVPILRKNGMETQR-RILNLKDTSGRSVELTLWG--- 387
EN N+++D IG++I + S I +KN +T + R + LKD +G SV + LW
Sbjct: 125 ENFWSMDINTLIDTIGVIIKIEKSKEIKKKNSNDTYKLRDIILKDKTGFSVTVVLWDTEA 184
Query: 388 -DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG-KSIGTIPSTQLFINPDFAEAHELR 445
+F EG ++S+ G++ F I S+++ INP + +L+
Sbjct: 185 INFNANEG------------DIMSIIDGQIIVFKNVNKISVTGSSEILINPRWKVTEDLQ 232
Query: 446 EWF 448
W+
Sbjct: 233 SWY 235
>gi|297736413|emb|CBI25136.3| unnamed protein product [Vitis vinifera]
Length = 168
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 84/149 (56%), Gaps = 16/149 (10%)
Query: 406 FPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWF-DSGGKNAATVSISREI 464
FP++++KS KV DF G S+ T+ + +NPD E+ +LR W+ D GK A+ I +I
Sbjct: 26 FPIIAIKSLKVGDFQGVSLSTLSKSIALVNPDTPESKKLRSWYHDYHGKVASMACIGSDI 85
Query: 465 ---AAGGAKNEIHKTVSQ---IKNEGLGRSEKPDWVTVRAFITFIKSD-SFCYTACPLMI 517
+ GG ++ + VS N LG +KP + ++RA+I+FIK + + Y AC
Sbjct: 86 SPSSKGGVRSMYYDRVSLSHVTSNPSLGE-DKPSFFSIRAYISFIKPEQTMWYQAC---- 140
Query: 518 GDRQCNKKVTQS-GNRWQCDRCNQEIDEC 545
+ CNKKVT + + + C+ C + DEC
Sbjct: 141 --KTCNKKVTDAIESGYWCEGCEKNDDEC 167
>gi|238616412|ref|XP_002399041.1| hypothetical protein MPER_00208 [Moniliophthora perniciosa FA553]
gi|215477155|gb|EEB99971.1| hypothetical protein MPER_00208 [Moniliophthora perniciosa FA553]
Length = 94
Score = 85.1 bits (209), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/92 (44%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
Query: 221 WAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
W IKARVT K D++ ++N RG+GK+F+ L+D + GEIR T FNAV D Y ++ G+VY
Sbjct: 3 WTIKARVTQKSDMKTWSNQRGEGKLFNVTLMD-ESGEIRGTAFNAVADDLYGRLDEGKVY 61
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVD 312
ISK + A+K F+++ N++E+ LE + ++
Sbjct: 62 YISKAKVNLAKKKFSNVSNDYELSLERNTEIE 93
>gi|402222340|gb|EJU02407.1| nucleic acid-binding protein [Dacryopinax sp. DJM-731 SS1]
Length = 363
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 150/349 (42%), Gaps = 48/349 (13%)
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
GEI ++ VD E +E+G++Y I L + F + ++ + + D
Sbjct: 8 GEIDAVAWDKAVD-LSERLEIGKLYQIPNAKLVDSSDCFTRTNHWLQVQIHSN---DKIY 63
Query: 316 EEDDS--IPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK----NGME---- 365
E DS I + FR I+ +E ++ VD++ I++ + + ++K G E
Sbjct: 64 ELQDSGRILCIFYDFRRINSLEWFNDSRHVDLVAIIVRLGQPIKGMKKFKDQEGNERELI 123
Query: 366 TQRRILNLKDTSGRSVELTLWGD----FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG 421
T + L D SG V L + D F +EG+ V+++K+ ++ +
Sbjct: 124 TDHVDVYLGDNSGEFVLLAAFDDYGPQFIGREGE------------VITIKNALIDKYGN 171
Query: 422 K-SIGTIPSTQLFINPDFAEAHE-LREWFDSGGKNAATVSISREIAAGGA-------KNE 472
S+ T T + AH+ L+EWF+S G A T+ + + + N
Sbjct: 172 SVSLKTKEFTTELLFESGNHAHKVLKEWFESPGSIADTLCLMTGTYSADSVPDSWFTANI 231
Query: 473 IHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKK--VTQSG 530
KT+ +I +G+G V VR ++F + Y ACP + CNKK V +SG
Sbjct: 232 PTKTIKEIFTDGIGAHGVRSQVKVRGTVSFYSDREYTYLACP----NPNCNKKAQVAESG 287
Query: 531 NR--WQCDRCNQEIDECDYRYLLQAQIQDQTGL-TWVTAFQESGEEILG 576
N W C C +Y L Q++D GL W+TAF + E + G
Sbjct: 288 NSTVWWCTHCKTVYLVPSEKYRLNMQMRDTMGLNNWITAFNGAMERLFG 336
>gi|302823886|ref|XP_002993591.1| hypothetical protein SELMODRAFT_431648 [Selaginella moellendorffii]
gi|300138603|gb|EFJ05366.1| hypothetical protein SELMODRAFT_431648 [Selaginella moellendorffii]
Length = 160
Score = 84.3 bits (207), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/114 (37%), Positives = 64/114 (56%)
Query: 476 TVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQC 535
T+S+I N L E V A + +K+D F Y AC ++ RQC KK T++ + W C
Sbjct: 37 TLSEISNMQLKVLESSPIYRVIATVKEMKTDEFYYNACINVVNARQCGKKTTRTADGWFC 96
Query: 536 DRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYEL 589
+ CN E +++Y L+ I+D + W AFQE+ +EI+G AKEL + EL
Sbjct: 97 NYCNFESANMEFKYALKMCIEDSSSHVWAIAFQEATQEIVGMSAKELATIYMEL 150
>gi|301632434|ref|XP_002945290.1| PREDICTED: hypothetical protein LOC100497369, partial [Xenopus
(Silurana) tropicalis]
Length = 1160
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 11/135 (8%)
Query: 318 DDS--IPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLK 374
DDS +P QF F I E+ES ++++D+IGI + + +R N E +R +NL
Sbjct: 13 DDSADVPMVQFEFVPIGELESKNKDTVLDIIGICKNAEEVTKVTIRSNNREVSKRNINLM 72
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
D+SG+ V TLWG+ +K Q PV+++K +++DF G+S+ + S+ + I
Sbjct: 73 DSSGKVVSTTLWGEDADKFDGSRQ--------PVVAIKGARLSDFGGRSLSVLSSSTVMI 124
Query: 435 NPDFAEAHELREWFD 449
NPD EA +LR W D
Sbjct: 125 NPDIPEAFKLRAWLD 139
>gi|391335288|ref|XP_003742027.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 384
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 142/322 (44%), Gaps = 32/322 (9%)
Query: 214 LNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEI 273
+ P Q ++ RV +K ++ ++ +GKVFS + D+ +I++ FN +F EI
Sbjct: 57 MGPSQKKYQF--RVVSKKEIHTWSKGSSNGKVFSCQVADA-STDIQIVAFNDNCLQFSEI 113
Query: 274 IEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISE 333
++ + Y I + + A FN ++ EI L + + I ++ ++ SE
Sbjct: 114 LQEHQEYDIEGFACRQANPIFNTTSSKLEIVLNKGTKIRALNRATLRIAEKSPNYVSFSE 173
Query: 334 IESAENNSIVDVIGIVISVNPSVPILRK-NGMETQRRILNLKDTSGRSVELTLWGDFCNK 392
++S + N IVDV G++I V+P RK +G +R L + D + + + LW + N
Sbjct: 174 LQSMKENDIVDVCGVIIHVSPVEEFTRKRDGKPIVKRELRIVDEDRKILTINLWNERTNT 233
Query: 393 EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAH--ELREWFDS 450
E L E V V SV+ G++N F G S I+ D +L +W++
Sbjct: 234 E---LVEKVAV------SVRHGRINIFRGNLSSNCESASK-IDSDLGNERLLKLSQWWEK 283
Query: 451 GGKNAATVSISREIAAGGAKNEIHKTVS------QIKNEGLGRSEKPDWVTVRAFITFIK 504
G A+ + S +E+ KTV+ ++K E P RA I +
Sbjct: 284 HGLEASGDNSSNR------NSELMKTVNFEAAQREVKIEAGSVKSPPFVFWTRARIATVA 337
Query: 505 SDSFCYTACPLMIGDRQCNKKV 526
+S Y AC C KKV
Sbjct: 338 QNSLMYRAC----AKTNCLKKV 355
>gi|403363046|gb|EJY81258.1| hypothetical protein OXYTRI_21347 [Oxytricha trifallax]
Length = 384
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 100/229 (43%), Gaps = 13/229 (5%)
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNH 196
+P NLQ + SQ F+ N R N G Q Q + F+N
Sbjct: 75 SPQKSVSNLQLESQYQSQ----FTQIN----RPLNFGQSQNQTQQYSQYQNRAQNYFQNR 126
Query: 197 GPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGG 256
++ +PI ALN + W I+A++ K +LR R V +++D G
Sbjct: 127 QERNSTIIDSKYMPIKALNTFSRDWQIQAKLARKSELRE--TQRQKTVVLKIEIIDVFGT 184
Query: 257 EIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE 316
I T F F + +EV +VYL S G +KP K F+ L N++ I E T+ + C
Sbjct: 185 TIECTFFADAAKDFNQRLEVNKVYLFSNGQVKPNDKRFSTLPNDFCIVFEQTANIIECN- 243
Query: 317 EDDSIPKQQFSFRH--ISEIESAENNSIVDVIGIVISVNPSVPILRKNG 363
ED I Q+ F + I IE + N +DV G++I + + KNG
Sbjct: 244 EDIQIEDQKGEFDNTLIGSIEECDVNKPIDVSGVIIEMADQEIVKLKNG 292
>gi|147818369|emb|CAN60163.1| hypothetical protein VITISV_008661 [Vitis vinifera]
Length = 774
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 24/201 (11%)
Query: 453 KNAATVSISREIAAGGAKNEIHKTVSQ---IKNEGLGRSEKPDWVTVRAFITFIKSD-SF 508
K T++ + GG ++ + VS N LG +KP + ++RA+I+FIK + +
Sbjct: 589 KRDITIADKTPSSKGGVRSMYYDRVSLSHVTSNPSLGE-DKPSFFSIRAYISFIKPEQTM 647
Query: 509 CYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQ 568
Y AC + CNKKVT + E Y Y++ ++ D +G + F
Sbjct: 648 WYQAC------KTCNKKVTDA-------------IESGYWYIMVVKVSDDSGEACLALFN 688
Query: 569 ESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITV 628
E E I GC A EL LK + ++ RF + ++ ++ +LFR+ + + Y +E+R IT
Sbjct: 689 EQAERIFGCSADELDKLKSQEGEENRFQQKLKEAIWVPHLFRISVAQHEYMNEKRQWITA 748
Query: 629 IRADQVNYSSESRYLLDLISK 649
V++++ SR LL+ ISK
Sbjct: 749 XAVVAVDFAAXSRLLLEEISK 769
>gi|115470979|ref|NP_001059088.1| Os07g0190600 [Oryza sativa Japonica Group]
gi|34394551|dbj|BAC83855.1| DNA binding protein-like [Oryza sativa Japonica Group]
gi|113610624|dbj|BAF21002.1| Os07g0190600 [Oryza sativa Japonica Group]
Length = 544
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 184/421 (43%), Gaps = 30/421 (7%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
++ +N + W IK RV L + R D L+D +G I + +F
Sbjct: 6 LSQINSTRHNWRIKVRVARSWHLSGTSKRR-DFTALELILVDEEGVGITACVGENEIQKF 64
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVD-LCTEEDDSIPKQQFSFR 329
I G Y + + K N + + + IF + V+ + TE S+P F+F
Sbjct: 65 STSIVEGHAYFLRNFRVSRQTKKLNAVPSTYAIFFTPWTIVEEIPTEISGSLPLYIFNFV 124
Query: 330 HISEIE--SAENNSIVDVIGIVISVNPSVPILRKNGME--TQRRILNLKDTSGRSVELTL 385
+++ + N +VDVIG + V+P +++ NG+ + RR + L+D S R +E+TL
Sbjct: 125 DFEDLDERARHPNGLVDVIGQLTVVHP---LVQSNGLNGPSVRRNVELRDLSDRLLEITL 181
Query: 386 WGDFCNK-EGQKLQEMVDVGFFPVLSVKSG-KVNDFSGK-SIGTIPSTQLFINPDFAEAH 442
W + E + L E + PV+ V +G + FSG S + +T+ +IN D E +
Sbjct: 182 WAEHATSFEDEFLIETIGKD-EPVIIVFAGLNMKLFSGAPSCRSSAATKWYINIDIPEIN 240
Query: 443 ELREWFDSGGKNAATVSISREIAAGGAKNEI---HKTVSQIKNEGLGRSEKPDW-VTVRA 498
R G+ + + + AA GA NE K++S++ + L + D T A
Sbjct: 241 AFRTSLQ--GRGCEVLLVPSDGAALGAANEADANRKSISELLS--LNPHDNNDVRFTCDA 296
Query: 499 FITFIK-SDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQD 557
I I S + Y AC + C K V + ++C C+ Y L I+D
Sbjct: 297 RIKEIDVSSGWWYKACSI------CRKGVKPTLQGFECVNCDNTEPIITPSYKLNVVIED 350
Query: 558 QTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEEL 617
T + F E+++ A +L ++ + + +R+ + +++F++ I E+
Sbjct: 351 NTDRAKIFMFGGMAEQVVRRTAADL--VEESSANQLLLPSPLRALIGRRFVFQIVISEQT 408
Query: 618 Y 618
+
Sbjct: 409 F 409
>gi|70914008|ref|XP_731701.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56501834|emb|CAH83538.1| hypothetical protein PC300559.00.0 [Plasmodium chabaudi chabaudi]
Length = 90
Score = 80.9 bits (198), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Query: 233 LRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQK 292
+R++ +GKVF+ +L D + GEI+V F VD++Y+ +EVG++Y ISKG++K A K
Sbjct: 1 IRKFYTGNKEGKVFNIELCD-ESGEIKVNFFGKAVDKWYDYLEVGKIYKISKGNIKSANK 59
Query: 293 NFNHLKNEWEIFLEATSTVDLCTEEDDSIPK 323
FN LK++ EI L+ S ++L E D +IPK
Sbjct: 60 KFNTLKHDCEITLDENSILELLEENDMNIPK 90
>gi|356531499|ref|XP_003534315.1| PREDICTED: uncharacterized protein LOC100812465 [Glycine max]
Length = 563
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 69/103 (66%), Gaps = 4/103 (3%)
Query: 9 SISLINGGDVNSKPLVQVMDIKLIGSTQE----RYRFLISDSVSTQHAMLATQLNDRVKT 64
+I + G ++ KP++QV++++L+ S Q + ++SD Q AML TQ N V++
Sbjct: 321 TIQNLAGQSLDLKPVLQVLELELVNSQQHSASVNFHLVLSDGYHFQQAMLTTQKNQLVRS 380
Query: 65 GQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNP 107
G+++KGS+V+L ++C+ VQ+ KII+VL+++ ++ CE +G P
Sbjct: 381 GKLQKGSIVRLTQFVCNVVQSCKIIMVLDLDVVLEKCELLGQP 423
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 76/113 (67%), Gaps = 6/113 (5%)
Query: 1 MPVNLTPNSISLINGGDV--NSKPLVQVMDIKLIGSTQ----ERYRFLISDSVSTQHAML 54
M V+LT +I+ I G+ N +P++QV+++K + S Q ERY ++SD Q ML
Sbjct: 1 MAVSLTQGAITEICRGNCSENLQPVLQVIELKQVQSQQNSTVERYCVVLSDGSFYQQGML 60
Query: 55 ATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNP 107
ATQ ND V +G+++KGSV++L ++C+ VQN KII++++++ I+ CE IG P
Sbjct: 61 ATQKNDLVHSGKLQKGSVLRLTQFLCNVVQNHKIIIIIDLDVILDYCELIGQP 113
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 73/109 (66%), Gaps = 6/109 (5%)
Query: 5 LTPNSISLINGGD--VNSKPLVQVMDIKLIGSTQ----ERYRFLISDSVSTQHAMLATQL 58
LT +I I G+ N +P++QV++ KL+ S Q ERYR ++SD Q MLATQ
Sbjct: 176 LTQGAIMEICSGNDPKNLQPVLQVIEFKLVQSQQNSTIERYRVVLSDGSFYQQGMLATQK 235
Query: 59 NDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNP 107
N+ + +G++++G++++L +IC+ VQNRKII++++++ I CE IG P
Sbjct: 236 NELIYSGRLQQGAIIRLTQFICNVVQNRKIIIIVDLDVICEKCELIGEP 284
>gi|296084703|emb|CBI25845.3| unnamed protein product [Vitis vinifera]
Length = 131
Score = 80.5 bits (197), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 12/127 (9%)
Query: 465 AAGGAKNEIHKTVSQ---IKNEGLGRSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDR 520
+ GG ++ + VS N LG +KP + ++RA+I+FIK D + Y AC +
Sbjct: 12 SKGGVRSMYYDRVSLSHVTSNPYLGE-DKPSFFSIRAYISFIKPDQTMWYRAC------K 64
Query: 521 QCNKKVTQS-GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPA 579
CNKKVT + G+ + C+ C + DEC RY++ ++ D +G W++ F E E I GC A
Sbjct: 65 TCNKKVTGAIGSGYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSMFNEQAERIFGCSA 124
Query: 580 KELYMLK 586
E LK
Sbjct: 125 DEPDKLK 131
>gi|10177987|dbj|BAB11360.1| replication protein A1-like protein [Arabidopsis thaliana]
Length = 543
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/444 (19%), Positives = 185/444 (41%), Gaps = 55/444 (12%)
Query: 205 PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGEIRVTC 262
P + ++ + P++ W ++ ++ L + + D + D++ D +G ++ +T
Sbjct: 4 PLGLTYLSDVKPFKTNWCVRVKI-----LHLWRQTK-DASRETLDVIICDENGSKMHITI 57
Query: 263 FNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIP 322
+ +F+ I+VG +I +L P + + + + V C DS+
Sbjct: 58 RKHYIGKFHRSIKVGDWKIIDNFTLSPLTGKYKISSLTYRMAFNHNTDVIKCDPVSDSVF 117
Query: 323 KQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVE 382
F + + ES + N ++D++G V+ V I+ +N ++ ++D S +
Sbjct: 118 LDLADFEGV-KTESYDENVLIDILGQVVRVGKVDEIMAQNK-PNKKLEFQIRDASNERLP 175
Query: 383 LTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAH 442
TLWG F K L+ + VL ++ K+N+F G + +++ INP
Sbjct: 176 CTLWGVFAEKVFSALKSIKHDEKTVVL-IRYAKINNFKGNHAFDV--SEVIINP--VHVP 230
Query: 443 ELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITF 502
E+ + S + ++I N +++ + ++ W + +
Sbjct: 231 EVELFVKSLPSDGLALTIQ--------DNYVNRDLIKVGQ----------WRILGSIFAI 272
Query: 503 IKSDSFCYTACPLMIGDRQCNKKV------TQSGN--------RWQCDRCNQEIDECDYR 548
+ Y CP +CN+K T +G ++ CD+C + I + R
Sbjct: 273 DTDWGWFYFGCP------KCNRKTELVKESTSTGKMVKTPMKPKFWCDKCQESITNVEAR 326
Query: 549 YLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKY-ELQDDVRFGEIIRSRVFNQY 607
Y L ++ DQT + F+ + +++G ++EL +Y E++D ++I + +
Sbjct: 327 YKLHVRVMDQTAEIKLMVFENNATKLIGKSSEELVDGQYEEIKDPTIISDVITNLCGKTF 386
Query: 608 LFRLKI-KEELYGDEQRVKITVIR 630
F + + K +YG + K+T +
Sbjct: 387 HFLVSVEKANIYGGKDIYKVTKVH 410
>gi|391336033|ref|XP_003742388.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Metaseiulus occidentalis]
Length = 173
Score = 79.7 bits (195), Expect = 4e-12, Method: Composition-based stats.
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 7/163 (4%)
Query: 486 GRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRCNQEIDE 544
G ++KP ++ RA IT ++ Y ACP + C KK G+ + C++C
Sbjct: 10 GVTDKPLYLWNRATITMFNKETSMYKACP----NENCMKKAQDQGDGNYSCEKCATSGPN 65
Query: 545 CDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVF 604
+R +L+ + D T W TAF E E+ILG A L Y + +I +F
Sbjct: 66 FKWRLVLKMAVADATKQLWCTAFNEKAEQILGVTAATLG--DYSENNPDEMDKIFADAMF 123
Query: 605 NQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
Q+ F+ + + E+Y DE+R VI +V + R+L + I
Sbjct: 124 KQFHFKFRGRMEVYQDERRFNTAVIDVKEVKLVDDCRHLANDI 166
>gi|349805559|gb|AEQ18252.1| putative replication protein A DNA-binding subunit [Hymenochirus
curtipes]
Length = 298
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 528 QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKY 587
Q ++C++C++E YR + A I D W+T FQES E ILG A L LK
Sbjct: 178 QQNGLFRCEKCDKEFPNFKYRLIPSANIADFGENQWITCFQESAESILGQNAAYLGELKE 237
Query: 588 ELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
+++ F E+ ++ F Y+FR+++K E Y DE R+K T + V+Y SR L+ I
Sbjct: 238 --KNEQSFDEVFQNANFRSYIFRVRVKLETYNDESRIKATAMEVKPVDYKEYSRKLIMNI 295
Query: 648 SK 649
K
Sbjct: 296 RK 297
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Query: 342 IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMV 401
IV + ++ S + + ++ N E +R ++L D+SG V TLWG+ ++ Q
Sbjct: 76 IVMEMEVLKSADLTKVTIKSNNREVSKRNIHLMDSSGTVVSTTLWGEDADRFDGSRQ--- 132
Query: 402 DVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNA 455
PV++VK +++DF G+S+ + S+ + INPD EA +LR WFDS +N
Sbjct: 133 -----PVVAVKGARLSDFGGRSLSVLSSSTVMINPDIPEAFKLRAWFDSEQQNG 181
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 17 DVNSKPLVQVMDIKLIGSTQ--ERYRFLISDSVSTQHA-MLATQLNDRVKTGQVKKGSVV 73
D +SKP++QV++I+ I + RYR L+SD ++T + MLATQLN V + +
Sbjct: 1 DSSSKPILQVINIRPINTANGPPRYRLLMSDGLNTLSSFMLATQLNTLVDNNLLATNCIC 60
Query: 74 QLIDYICSTVQNRKIIVVLNMETI 97
++ YI +T + R++I+V+ ME +
Sbjct: 61 EVTRYIVNT-KGRRVIIVMEMEVL 83
>gi|241617732|ref|XP_002408205.1| replication factor A 1, rfa1, putative [Ixodes scapularis]
gi|215502936|gb|EEC12430.1| replication factor A 1, rfa1, putative [Ixodes scapularis]
Length = 347
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 420 SGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQ 479
SG S+ I S+QL +NPD E+H L W+ + G + T S+S K +S+
Sbjct: 183 SGVSLSMIGSSQLQVNPDIPESHALIGWYSNEGASLQTQSLSVRTGGFEGAAASWKHLSE 242
Query: 480 IKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-RWQCDRC 538
K++ LG +KPD+ + +A + ++ ++ Y ACP +CNKK+ N ++C++C
Sbjct: 243 AKSQKLGFGDKPDYFSCKASVAIVRKENCLYKACP----AEKCNKKLVNLENGLYRCEKC 298
Query: 539 NQEIDECDYRYLLQAQIQDQTGLT 562
N++ E +R ++ + + +T +
Sbjct: 299 NEQTSEFKWRLIVSDESRLKTSVV 322
>gi|357516559|ref|XP_003628568.1| Replication factor A protein [Medicago truncatula]
gi|355522590|gb|AET03044.1| Replication factor A protein [Medicago truncatula]
Length = 559
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 163/375 (43%), Gaps = 54/375 (14%)
Query: 216 PYQGRWAIKARVTAKGDLRRY---NNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYE 272
P + W I+ RV ++ + N A LLD G +I+ ++ F +
Sbjct: 13 PGRLNWRIRVRVVRMWEVPTFLKPNQANS----LEMVLLDQMGVKIQAIVRKQLIYVFQK 68
Query: 273 IIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHIS 332
+ G VY IS S+ P+ ++ + ++I + T+ V CT +IP SF I
Sbjct: 69 RLREGEVYNISYFSVAPSTGSYRAATHPYKIVFQMTTKVQSCTSA--TIPLYGLSFTSIV 126
Query: 333 EI--ESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFC 390
++ + E + +VDV+G+V +V+ +R +G T+ I + D SG+ +E L+G++
Sbjct: 127 DVSNHTVEYDYLVDVMGLVTAVSEEREYVR-DGSVTKMIIFEVTDHSGK-IECALFGEYV 184
Query: 391 NKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDS 450
V GF ++++ K GT T+L +NPD E ++
Sbjct: 185 ----ALWNGFVSKGFEDKATLQNVK---------GT---TRLIVNPDVPEVIAFKDRLIG 228
Query: 451 GGKNAATVSISREIAAGGAKNEIH---------KTVSQIKNEGLGRSEKPDWVTVRAFIT 501
G V + + G +K + KT+SQ+ N SE+ + V A ++
Sbjct: 229 LG---IQVPPTLTVLGGPSKPSMEEEFLRMYPKKTISQLFN-----SEEDGFFVVSAIVS 280
Query: 502 -FIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTG 560
F++ + + Y AC +C++ VT + C C++ + + RY ++ ++ D TG
Sbjct: 281 GFVEGEEWWYPAC-------KCHRSVTADSGAYYCKGCDKHVIQMVPRYKIKLRVDDGTG 333
Query: 561 LTWVTAFQESGEEIL 575
+ F +L
Sbjct: 334 DSVFVLFDSDVHYLL 348
>gi|391325776|ref|XP_003737403.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
gi|391325887|ref|XP_003737458.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
gi|391326850|ref|XP_003737923.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
gi|391332922|ref|XP_003740876.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
gi|391333156|ref|XP_003740987.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
gi|391341618|ref|XP_003745124.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 280
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 118/255 (46%), Gaps = 12/255 (4%)
Query: 199 ILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEI 258
++ +E + + +G ++ RV +K ++ ++ G GK+F+F + D+ G EI
Sbjct: 22 VVTHEQSGGAKTVQHITEGKGCGQVEGRVKSKTPVKHWSKGDGSGKIFNFVMSDTSG-EI 80
Query: 259 RVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEED 318
V + +++I VG+ Y I+ +K + +E E+ L S V T D
Sbjct: 81 NVIASGDSAEEIFDMITVGQCYKINAYKVKAVNPQYRATDHECELQLTKLSKVIPITGND 140
Query: 319 DSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSG 378
+PK Q + E+ + N+ VD++ +V V P ++G+ ++ + + D S
Sbjct: 141 --LPKIQAQTTVLMELLTKPVNTTVDILVVVFDVRPPQTFNCRDGINRVKQTVTVLDDSM 198
Query: 379 RSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG-KSIGTIPSTQLFINPD 437
+ V L LW +F K K E V +++ +V D++G + + T +T +
Sbjct: 199 KMVNLGLWSEFVGKLDGKEGEAV--------ILQNLQVRDYNGTRQLSTTTNTIIREAAG 250
Query: 438 FAEAHELREWFDSGG 452
A+A LR+WF G
Sbjct: 251 DADAERLRQWFKVDG 265
>gi|413917541|gb|AFW57473.1| retrotransposon protein [Zea mays]
Length = 581
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 151/388 (38%), Gaps = 37/388 (9%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNAVV 267
P+A L+P I+ RV K + R A DG + +L+ D G I A+
Sbjct: 48 PVAELHPQSTNVVIRVRVIRKWEFR---GATNDGPLQHINLVLADEQGTPIHAEIAAALA 104
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
IIE+ +VY + + + P++ F + N + I + + + P+ +
Sbjct: 105 VDKGSIIEIEKVYELKRFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQVFPRYIYK 164
Query: 328 FRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
IE + +N ++DV+G++ +NP P+ N T R + +K+TS S+++TL
Sbjct: 165 LTCFENIEDSIDNRTYLIDVLGMLTQINPPHPVGYNNS--TIIRDIFIKNTSDMSLKITL 222
Query: 386 WG---------DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS-IGTIPSTQLFIN 435
WG D N+ ++ ++ VGF F G+ + + ++ + N
Sbjct: 223 WGNQASSFSISDVYNQSNKQPIVILLVGFL---------AKRFKGQPYLSSTAASSWYFN 273
Query: 436 PDFAEAHELREWFDSGG-KNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWV 494
P EA + + + EI N KTV ++ N +
Sbjct: 274 PVIPEAQTYYNRLQNNDLQLIQPTAAEEEILLSQPPNLEQKTVEELLNIDPDMFPPEGYR 333
Query: 495 TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQ 554
+++ + Y +C +C+K +Q+ + C C + ++RY L
Sbjct: 334 CTVTISRIVQNSKWWYPSC------SRCHKSSSQTSTGYHCTSCG--CTDINFRYKLSFI 385
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKEL 582
D T F +I+G P L
Sbjct: 386 ATDGTCEAEFFCFDNIARKIVGKPCDNL 413
>gi|391326949|ref|XP_003737971.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 290
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 16/250 (6%)
Query: 206 ARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
R + L Y G ++ RVT+K ++ ++ +GK+FSF L+ + I V
Sbjct: 38 TRFLKDVVLTRYGG--VLEGRVTSKTPIKEWSKNGKEGKLFSF-LMADETARISVIVSGD 94
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQ 325
D + I+V Y I+ KP +F+ +E E+ L S + E D IP+ Q
Sbjct: 95 KTDEVFSTIQVNHCYRITGFKPKPVNPHFSSTDHECEVTLSKISKIKEI--ERDDIPQTQ 152
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
I+ I + E N ++D+ I+ + P I ++G +++ L D S + V L L
Sbjct: 153 SLCSSIASILNIEKNCLIDLTAILFDLLPVQNITCRDGSIQKKQTALLVDDSKKIVSLDL 212
Query: 386 WGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI-GTIPSTQLFINPDFAEAHE- 443
W NK +KL +M PV S+KS V +F GK + G++ +T E +
Sbjct: 213 W----NKHVEKLTDMEGC---PV-SIKSITVKEFRGKIVLGSMANTTFNDGEPTGETRKE 264
Query: 444 -LREWFDSGG 452
++W+ +GG
Sbjct: 265 YQKKWWLTGG 274
>gi|242081655|ref|XP_002445596.1| hypothetical protein SORBIDRAFT_07g022365 [Sorghum bicolor]
gi|241941946|gb|EES15091.1| hypothetical protein SORBIDRAFT_07g022365 [Sorghum bicolor]
Length = 273
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 76/126 (60%), Gaps = 7/126 (5%)
Query: 21 KPLVQVMDIKLIGSTQE---RYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLID 77
+P++QV+D+ L+ S + RY ++SD+V TQ A LA LN V+ +K GS+++L++
Sbjct: 57 QPVMQVVDVSLLRSELKKFGRYHLVLSDTVYTQDATLAPGLNHLVENILIK-GSIIRLLE 115
Query: 78 YICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSESELTAQKTIPSNNL--PQPVRVNNY 135
+IC T ++ +I+V+ +E + CE IG+PK + E L + +P P P V NY
Sbjct: 116 FICDTTKSPSMIIVIQLEVLQTVCELIGSPKAY-ELSLFEKPYVPEGKYGEPYPRSVANY 174
Query: 136 SAPNSG 141
+ P +G
Sbjct: 175 TRPMNG 180
>gi|449692091|ref|XP_002168845.2| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Hydra magnipapillata]
Length = 83
Score = 77.4 bits (189), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 7/86 (8%)
Query: 466 AGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKK 525
AGG K +KT+ QIK+EGLG EKPD+ VRAF+ F + ++ Y ACP CNKK
Sbjct: 1 AGGGK---YKTLGQIKDEGLGMGEKPDYFNVRAFVVFYRKENCMYQACP----GADCNKK 53
Query: 526 VTQSGNRWQCDRCNQEIDECDYRYLL 551
V + +++C++C++ + YR +L
Sbjct: 54 VIEDNGQFRCEKCDRTYPDFKYRMVL 79
>gi|357484637|ref|XP_003612606.1| Replication protein A1-like protein [Medicago truncatula]
gi|355513941|gb|AES95564.1| Replication protein A1-like protein [Medicago truncatula]
Length = 708
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLIGSTQ----ERYRFLISDSVSTQHAMLAT 56
M VNLT +I + P++Q +D+K + S Q E Y+ +SD + +H MLA
Sbjct: 368 MAVNLTQGAIVKMCFTSEELHPVLQFIDLKPVQSQQNSAIEIYQLFLSDGLHYEHGMLAK 427
Query: 57 QLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNP 107
Q N+ V G+++KGS+V+L +I V+ RK+++V+++E I+ C+ IG P
Sbjct: 428 QKNELVHNGRLQKGSIVKLTQFIYKHVRTRKLLIVVDLEVIMDKCDLIGKP 478
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 66/112 (58%), Gaps = 5/112 (4%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLI----GSTQERYRFLISDSVSTQHAMLAT 56
M VNLT +I + +P++QV+D+KL+ ST + Y+ ++SD + L+
Sbjct: 513 MAVNLTQGAIMKMCFTSEEIQPVLQVIDLKLLQSQQNSTTKMYQLVLSDGSHYKQGTLSV 572
Query: 57 QLNDRVKTGQVKKGSVVQLIDYICSTV-QNRKIIVVLNMETIILDCEPIGNP 107
Q N + +G+++KGS+V+L + IC+ V QN KII + ++ I+ + IG P
Sbjct: 573 QKNKLIHSGRLQKGSIVKLNEIICNDVNQNLKIIFFVELDVILDKWDLIGKP 624
>gi|12322096|gb|AAG51090.1|AC027032_10 hypothetical protein [Arabidopsis thaliana]
Length = 567
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 162/391 (41%), Gaps = 53/391 (13%)
Query: 214 LNPYQGRWAIKARVTAKGDLRRY-NNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYE 272
+ PY+ W ++ ++ ++Y +N R + + D G ++ T +V +F
Sbjct: 11 VRPYKNAWRVQVKIL--HSWKQYTSNTR---ETIELVISDEHGKKMHATVKKELVSKFVH 65
Query: 273 IIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHIS 332
+ VG I L A F + +++ + + V C DS + S
Sbjct: 66 KLIVGEWVFIEIFGLTYASGQFRPTNHLYKMAFQVRTEVMGCASVSDS---NFLTLASFS 122
Query: 333 EIESAENN--SIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFC 390
+I+S E N +VD IG +I+V + L+ N T + ++D +++TLWG +
Sbjct: 123 KIQSGELNPHMLVDAIGQIITVG-ELEELKANNKRTTKIDFEIRDQMDERMQVTLWGTYA 181
Query: 391 NKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIG-TIPSTQLFINPDFAEAHELREWFD 449
+ + QE GK N S KS+ + ++Q+ +NPDF E H+ +
Sbjct: 182 QEVYRACQE------------SEGK-NTASVKSLSNSFDASQVHVNPDFPEVHDFSQTLL 228
Query: 450 SGGKNAATVSISR----EIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKS 505
+ G A V +R E+ A + T + I+N L S + V V I + +
Sbjct: 229 NDG--AICVFRARVPRFEMVAVKRTDYSEYTRNTIEN--LLSSTEVGKVRVLCTIYAVDT 284
Query: 506 D-SFCYTACPLMIGDRQCNKKVTQ------------SGNRWQCDRCNQEIDECDYRYLLQ 552
D ++ Y +C + CNKKV R+ CD C + RY++
Sbjct: 285 DWAWYYISC------KTCNKKVNHIHAGVNGVNNKGKKPRFWCDTCTSVVTNVVSRYMIY 338
Query: 553 AQIQDQTGLTWVTAFQESGEEILGCPAKELY 583
A++ D TG + F EI+G A ++
Sbjct: 339 AKVMDSTGEAKLLLFDSICSEIIGESAASVF 369
>gi|388505094|gb|AFK40613.1| unknown [Medicago truncatula]
Length = 341
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLIGSTQ----ERYRFLISDSVSTQHAMLAT 56
M VNLT +I + P++Q +D+K + S Q E Y+ +SD + +H MLA
Sbjct: 1 MAVNLTQGAIVKMCFTSEELHPVLQFIDLKPVQSQQNSAIEIYQLFLSDGLHYEHGMLAK 60
Query: 57 QLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNP 107
Q N+ V G+++KGS+V+L +I V+ RK+++V+++E I+ C+ IG P
Sbjct: 61 QKNELVHNGRLQKGSIVKLTQFIYKHVRTRKLLIVVDLEVIMDKCDLIGKP 111
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 66/112 (58%), Gaps = 5/112 (4%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLI----GSTQERYRFLISDSVSTQHAMLAT 56
M VNLT +I + +P++QV+D+KL+ ST + Y+ ++SD + L+
Sbjct: 146 MAVNLTQGAIMKMCFTSEEIQPVLQVIDLKLLQSQQNSTTKMYQLVLSDGSHYKQGTLSV 205
Query: 57 QLNDRVKTGQVKKGSVVQLIDYICSTV-QNRKIIVVLNMETIILDCEPIGNP 107
Q N + +G+++KGS+V+L + IC+ V QN KII + ++ I+ + IG P
Sbjct: 206 QKNKLIHSGRLQKGSIVKLNEIICNDVNQNLKIIFFVELDVILDKWDLIGKP 257
>gi|328705572|ref|XP_003242847.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Acyrthosiphon pisum]
Length = 386
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 25/232 (10%)
Query: 221 WAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
+ +K V K + Y++ R V + +++DS G +RV+ FN + D EI E + Y
Sbjct: 167 FVLKLTVVKKYAINTYSSCR----VLNVNMMDS-TGVVRVSAFNTLSDSLNEIFEENKTY 221
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSI-PKQQF-SFRHISEIESAE 338
++ LK Q E+ L++ S + E D I PK Q+ + +++
Sbjct: 222 YLADTILKHNQFGV-------ELKLQSHSVI---IESIDKIQPKIQYIKTSNFNKLLENN 271
Query: 339 NNSIVDVIGIVISVNPSVPILRKNG-METQRRILNLKDTSGRSVELTLWGDFCNKEGQKL 397
N+ D+IG+ I + E +R + L D S ++ L +WGD NK +K
Sbjct: 272 PNTFCDLIGVCIEIGDIEACSNSTSRTEIGKREIVLIDMSMATITLKVWGDQVNKFDEKF 331
Query: 398 QEMVDVGFFPVLSVKSGKVNDFSG-KSIGTIPSTQLFINPDFAEAHELREWF 448
P++ VK + F+G K + + LFINP+ AE H+L+EW+
Sbjct: 332 DNP------PIVMVKQAVLKQFNGAKYFSMVKFSVLFINPNLAEVHQLKEWY 377
>gi|24960752|gb|AAN65446.1| Putative helicase [Oryza sativa Japonica Group]
gi|108706525|gb|ABF94320.1| hypothetical protein LOC_Os03g08400 [Oryza sativa Japonica Group]
Length = 764
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 85/403 (21%), Positives = 169/403 (41%), Gaps = 36/403 (8%)
Query: 196 HGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDG 255
HG + + I PIA L P + + I R++ + R N + K LLD G
Sbjct: 232 HGQLYVAISRMNITPIAELRPGRYDYMICVRISRIWEFRG-TNEDDNIKHLDLVLLDQKG 290
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
I + + ++ G + ISK ++ A+ ++ + N + I L + +
Sbjct: 291 DAIYAEIPPDAIPLLNQYLQEGNIVYISKITVNNAKPSYRAVGNPYMIKLNKRTCIIEAK 350
Query: 316 EEDDSIPKQQFSFRHISEIE--SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNL 373
++ PK F ++ +++ + +DVIG +I+V+ + I + RRI+ L
Sbjct: 351 DQPMDFPKYTFDLVSFDKLHDFTSKTDRFLDVIGKIIAVSNAAMISTSSSDYRMRRIVKL 410
Query: 374 KDTSGRSVELTLWGDFCNK-EGQKLQEMVD----VGFFPVLSVK--SGKVNDFSGKSI-- 424
+D SG++++L+L G + +G+ + E+ + F S+K G SG +
Sbjct: 411 QDLSGKTIDLSLSGKRAVEFDGETILEVGQNNHIIAIFVGTSMKILKGTYEFLSGTTACR 470
Query: 425 -----GTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQ 479
IP ++F A +++ + ++ + R I HKT+++
Sbjct: 471 WYINENDIPEIKMFQKCLPPHADPIQKLYLQSDED-----MQRSIE--------HKTLAE 517
Query: 480 IKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCN 539
+K + + I + ++CY AC L CN K+ G+ +C + N
Sbjct: 518 LKEIDPFVDKDEKYQCTATIIGIQERKTWCYQACKL------CNCKMIWDGSILKCKKEN 571
Query: 540 QEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL 582
+ +Y+Y + D T + F++ G E++G A+ +
Sbjct: 572 CPCRQYEYKYKIPFIANDGTASLELVLFEKKGTELIGRTAETM 614
>gi|116785534|gb|ABK23763.1| unknown [Picea sitchensis]
Length = 67
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 207 RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV 266
R+ P+ +LN YQG W IK RVT KG LR + NARG+G VF+ +L D DG +I+ T F
Sbjct: 4 RVYPLVSLNRYQGNWTIKVRVTNKGPLRTFRNARGEGSVFNVELTDEDGTQIQATMFKEA 63
Query: 267 VDRF 270
D+F
Sbjct: 64 ADKF 67
>gi|391329407|ref|XP_003739166.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 291
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 112/235 (47%), Gaps = 19/235 (8%)
Query: 223 IKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLI 282
+ RV +K +++ + +GK+FSF + DS G I+V D +E I VG Y +
Sbjct: 45 VHGRVVSKSNMKNWKKNNQEGKLFSFVIEDSSGS-IQVVTSGDRCDALHEEITVGDCYRL 103
Query: 283 SKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSI 342
+ +L + +N K+ EI + S V + ++P+ + + I+EI + E N++
Sbjct: 104 NAFTLHESNPLYNKTKHPLEIHITKLSQVKKI--QGKNLPRSKINNITIAEIMNTELNTL 161
Query: 343 VDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG---DFCNKEGQKLQE 399
+D+IGIV V + ++G+ ++ + L D + R V L +W +F EG+
Sbjct: 162 IDIIGIVYEVGHPQNLSCRDGVMRIKQNIRLVDNTLRVVNLGVWNNAQNFAGTEGK---- 217
Query: 400 MVDVGFFPVLSVKSGKVNDFSGKSI-GTIPSTQLFINPDFAEAHELREWFDSGGK 453
+++ + V +++GK + T ST L P+ + L WF G+
Sbjct: 218 --------CVAITNLLVREYAGKKVLTTTDSTILKSEPNDPDLKTLEAWFTRDGQ 264
>gi|302825612|ref|XP_002994408.1| hypothetical protein SELMODRAFT_432333 [Selaginella moellendorffii]
gi|300137673|gb|EFJ04528.1| hypothetical protein SELMODRAFT_432333 [Selaginella moellendorffii]
Length = 203
Score = 75.5 bits (184), Expect = 8e-11, Method: Composition-based stats.
Identities = 61/252 (24%), Positives = 101/252 (40%), Gaps = 60/252 (23%)
Query: 314 CTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNL 373
C E+D IP + + + + +DVIG
Sbjct: 5 CVEDDLRIPNVVLNRMSVLDASKLGQETFIDVIG-------------------------- 38
Query: 374 KDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF 433
G S+++ LW EG +++E G P + +K +++D++GKSI + L
Sbjct: 39 ----GHSIDMCLWDSKAEDEGSEIEEKPGRGQKPTVCLKGSRISDYNGKSISVTGGSTLL 94
Query: 434 INPDFAEAHELREWFDSGGKNA----ATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSE 489
++P+ + L EW + T S S+ + +G KTVS++ + L
Sbjct: 95 VDPELEDVSWLCEWMVASYNTTIFVHVTNSSSKAVISGT------KTVSEMLSINL---- 144
Query: 490 KPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYR 548
K+ F Y AC ++ QC KKVTQ S + WQC C+ + + ++
Sbjct: 145 --------------KTGDFYYPACVKVVNGSQCGKKVTQVSESMWQCT-CDTDSGDIHFK 189
Query: 549 YLLQAQIQDQTG 560
Y L I D TG
Sbjct: 190 YALHLCILDSTG 201
>gi|297596199|ref|NP_001042171.2| Os01g0175300 [Oryza sativa Japonica Group]
gi|255672925|dbj|BAF04085.2| Os01g0175300 [Oryza sativa Japonica Group]
Length = 523
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 165/391 (42%), Gaps = 36/391 (9%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I PIA L P + + I R++ + R N + K LLD G I +
Sbjct: 3 ITPIAELRPGRYDYMICVRISRIWEFRG-TNEDDNIKHLDLVLLDQKGDAIYAEIPPDAI 61
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
+ ++ G + ISK ++ A+ ++ + N + I L + + ++ PK F
Sbjct: 62 PLLNQYLQEGNIVYISKITVNNAKPSYRAVGNPYMIKLNKRTCIIEAKDQPMDFPKYTFD 121
Query: 328 FRHISEIE--SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
++ +++ + +DVIG +I+V+ + I + RRI+ L+D SG++++L+L
Sbjct: 122 LVSFDKLHDFTSKTDRFLDVIGKIIAVSNAAMISTSSSDYRMRRIVKLQDLSGKTIDLSL 181
Query: 386 WGDFCNK-EGQKLQEMVD----VGFFPVLSVK--SGKVNDFSGKSI-------GTIPSTQ 431
G + +G+ + E+ + F S+K G SG + IP +
Sbjct: 182 SGKRAVEFDGETILEVGQNNHIIAIFVGTSMKILKGTYEFLSGTTACRWYINENDIPEIK 241
Query: 432 LFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKP 491
+F A +++ + ++ + R I HKT++++K +
Sbjct: 242 MFQKCLPPHADPIQKLYLQSDED-----MQRSIE--------HKTLAELKEIDPFVDKDE 288
Query: 492 DWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLL 551
+ I + ++CY AC L CN K+ G+ +C + N + +Y+Y +
Sbjct: 289 KYQCTATIIGIQERKTWCYQACKL------CNCKMIWDGSILKCKKENCPCRQYEYKYKI 342
Query: 552 QAQIQDQTGLTWVTAFQESGEEILGCPAKEL 582
D T + F++ G E++G A+ +
Sbjct: 343 PFIANDGTASLELVLFEKKGTELIGRTAETM 373
>gi|414585088|tpg|DAA35659.1| TPA: hypothetical protein ZEAMMB73_284494 [Zea mays]
Length = 524
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 151/353 (42%), Gaps = 52/353 (14%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
L+D +GG + + F +I+ G VY +S +K A + + + N+ I +
Sbjct: 44 LIDEEGGSAHAQIYPPLAAVFKPMIKEGNVYNVSYVQIKKANRMYKPVDNDIMIGFTKWT 103
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIESAEN--NSIVDVIGIVISVNPSVPILRKNGMETQ 367
T++ E + P+ +S ++ + + +DVIG V ++ V +R +TQ
Sbjct: 104 TIEELIEVPPAFPEIGYSLTPFDQLTTLVDIREYFIDVIGAVTMIS-DVATIRTKMRQTQ 162
Query: 368 --RRILNLKDTSGRSVELTLWG--------DFCNKEGQ-KLQEMVDVGFFPVLSVKSGKV 416
+R + +++ S +E+ +WG D + GQ LQ ++ VG L+
Sbjct: 163 TAKRSVTIQNESCTPLEVVMWGGQATSFPADQISIAGQDSLQIIIFVG---TLARSYAGT 219
Query: 417 NDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISRE--IAAGGAKNEI- 473
+G S S + ++NP EA L AA++ R ++A G+ +
Sbjct: 220 TSLTGGS-----SCKWYVNPQVPEATSL----------AASLQHKRSPIMSAAGSTQRVP 264
Query: 474 ------HKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDS-FCYTACPLMIGDRQCNKKV 526
HK VS+IK+ + EK +W+ +T +K D + Y +C R+C KK
Sbjct: 265 RISTAEHKKVSEIKHLHPFKHEKVEWLVT---VTVLKIDQLWWYESC------RKCLKKT 315
Query: 527 TQSGNRWQC-DRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCP 578
G+ ++C D + + RY L D+TG T F + I+ P
Sbjct: 316 KPHGDAYKCSDSGCGHVGPPNPRYRLLITAGDETGETDFILFGHMAQRIVKKP 368
>gi|413953822|gb|AFW86471.1| hypothetical protein ZEAMMB73_862151 [Zea mays]
Length = 662
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 158/372 (42%), Gaps = 54/372 (14%)
Query: 233 LRRYNNARGDGKVFSFD--LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPA 290
+ + + + + K+ D L+D +GG + + F +I+ G VY +S +K A
Sbjct: 163 MWEFYDPQDESKLLHADMVLIDEEGGSAHAQIYPPLAAVFKPMIKEGNVYNVSYVQIKKA 222
Query: 291 QKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAEN--NSIVDVIGI 348
+ + + N+ I + V+ E + P+ +S ++ + + +DVIG
Sbjct: 223 NRMYKPVDNDIMIGFTKWTIVEELIEVPPAFPELVYSLTPFDQLTTLVDIREYFIDVIGA 282
Query: 349 VISVNPSVPILRKNGMETQ--RRILNLKDTSGRSVELTLWG--------DFCNKEGQ-KL 397
V ++ V +R +TQ +R + +++ S +E+ LWG D + GQ L
Sbjct: 283 VTMIS-DVATIRTKMRQTQTAKRSVTIQNESCTPLEVVLWGEQATSFPADQISIAGQDSL 341
Query: 398 QEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAAT 457
Q ++ VG L+ +G S S + ++NP EA L AA+
Sbjct: 342 QIIIFVG---TLARSYAGTTSLTGGS-----SCKWYVNPQVPEATSL----------AAS 383
Query: 458 VSISRE--IAAGGAKNEI-------HKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDS- 507
+ R +AA G+ + HK VS+IK+ + EK +W+ +T +K D
Sbjct: 384 LQHKRSPIMAAAGSTQHVPRISTAEHKKVSEIKHLHPFKHEKVEWLIT---VTVLKIDQL 440
Query: 508 FCYTACPLMIGDRQCNKKVTQSGNRWQC-DRCNQEIDECDYRYLLQAQIQDQTGLTWVTA 566
+ Y +C R+C KK G+ ++C D + + RY L D+TG T
Sbjct: 441 WWYESC------RKCLKKTKPHGDAYKCSDSGCGHVGPPNPRYRLLITAGDETGETDFIL 494
Query: 567 FQESGEEILGCP 578
F + I+ P
Sbjct: 495 FGRMAQRIVKKP 506
>gi|357491997|ref|XP_003616287.1| Replication factor A protein [Medicago truncatula]
gi|355517622|gb|AES99245.1| Replication factor A protein [Medicago truncatula]
Length = 517
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 150/338 (44%), Gaps = 18/338 (5%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
L+D G +I + + F + G+VY +S S+ P+ ++ + ++I + T+
Sbjct: 46 LIDEMGTKIHASVRKQLFYVFQSKLSEGKVYEMSCFSVAPSVGSYRTTLHPYKIVFQMTT 105
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEI--ESAENNSIVDVIGIVISVNPSVPILRKNGMETQ 367
V C E SIP S I+++ +++++ +VDV+G + ++ +R +G T+
Sbjct: 106 KVQAC--EGASIPSLGISLCKIADVCQHTSDHDYLVDVLGFMTGISVEREYVR-DGKVTK 162
Query: 368 RRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI--G 425
I + D SG+ E L+G + + + + + G P++ V+ KV F K+
Sbjct: 163 MVIFEITDASGK-CECALFGQYVDTLNKLMGK--SGGGMPIILVQFAKVKIFRDKASLQN 219
Query: 426 TIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGL 485
+ +T++ INP +A ++R+ G + ++V + + + +T + E L
Sbjct: 220 VMNTTRILINPPIEQADQIRKSVTFGSMDVSSVPRIGARSKVSLEEDFLRTFPKKTLEQL 279
Query: 486 GRSEKPDWVTVRAFI-TFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDE 544
+ + V A I + + + Y AC +C++ V+ + C C + + +
Sbjct: 280 HSTFEDGVFVVYATIGGLVDHEDWWYPAC-------KCHRSVSADSGAFYCKGCAKHVFQ 332
Query: 545 CDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL 582
R+ ++ + D T + F + +L P L
Sbjct: 333 MVPRFRVKVNVSDATNVGVFVVFDGDMQNLLNTPCSSL 370
>gi|324515631|gb|ADY46264.1| Replication factor A 73 kDa subunit [Ascaris suum]
Length = 124
Score = 73.9 bits (180), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Query: 531 NRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQ 590
N+++C++CN +D Y LL ++ D +G WVT F+E ++LG A EL L +
Sbjct: 3 NQYRCEKCNLTLDSFKYVLLLSMELSDFSGSHWVTVFEEKATKLLGKTAAELGDLLESNR 62
Query: 591 DDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
D + ++ + F +Y FR++ K E Y D +R+K +V + V+Y L ++K
Sbjct: 63 LD-EYNDVFSAVRFREYTFRIRAKSEFYNDTERIKWSVFELNNVDYDKYVEELTKAVTK 120
>gi|9294533|dbj|BAB02796.1| replication protein A1-like [Arabidopsis thaliana]
Length = 581
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 161/392 (41%), Gaps = 56/392 (14%)
Query: 214 LNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEI 273
+ PY+ W ++ + R+Y G+ F D G +I + +V ++ +
Sbjct: 11 VRPYKTSWRVQVKTLHA--WRQYTANTGETLEVVFS--DETGKKIHCSVRKDLVSKYANM 66
Query: 274 IEVGRVYLISKGSLKPAQKNFNHLKNEWEI-FLEATSTVDLCTEEDDSIPKQQFSFRHIS 332
+ VG I SL A +F + +++ F+ TS + + D + +
Sbjct: 67 LTVGEWVFIETFSLNYAGGSFRPTSHLYKMSFVNGTSVIPSPSVSDSN----YLTLATFE 122
Query: 333 EIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFC 390
+I+S E N +VDVIG ++ + + L N T + +++D S + +TLWG F
Sbjct: 123 KIQSGELNPTMLVDVIGQIVMIG-ELEELEANNKPTTKIDFDIRDASDERIGVTLWGTFA 181
Query: 391 NKEGQKLQEMVDVGFFPVLSV-KSGKVNDFSG--KSIGTIPSTQLFINPDFAEAHELREW 447
+ + E G PV+ V + K+ + G + ++Q+F+NP F E
Sbjct: 182 QQVYRGCNE---AGARPVVCVLRFVKIKSYKGVRNLSNSFDASQVFVNPQFPEVDAFLRT 238
Query: 448 FDSGG----------KNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVR 497
G K VS + +N I + ++ + +G++ +
Sbjct: 239 LPQDGILLTYRERIPKLEIVVSKKSDSCLEYPRNTIQQLLNAVD---VGKAR------LM 289
Query: 498 AFITFIKSD-SFCYTACPLMIGDRQCNKKVT--QSG----------NRWQCDRCNQEIDE 544
I I +D ++ Y +C R CNKKVT SG R+ CD C +
Sbjct: 290 CTIYAIDTDWAWYYISC------RACNKKVTHIHSGVHGVNNKGKKPRFWCDSCKTVVTN 343
Query: 545 CDYRYLLQAQIQDQTGLTWVTAFQESGEEILG 576
RY++ A++ D TG + + F + EI+G
Sbjct: 344 VIARYMIYAKVMDNTGESKLLLFDQICTEIIG 375
>gi|391328094|ref|XP_003738527.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 319
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 34/263 (12%)
Query: 141 GTFN--LQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGP 198
GTFN + G FN N PN G + S+ + QP +P
Sbjct: 19 GTFNVPMIMMGDFNLTN--EMDRPNEGFVDQLDHTSLNKHDQPKRKP------------- 63
Query: 199 ILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEI 258
R++ +L G I+ RV +K ++ ++ +GK+F+F +L + GE+
Sbjct: 64 --------RLLRDISLAKVGGE--IQGRVKSKTLVKSWSKGNANGKIFNF-VLRNTSGEM 112
Query: 259 RVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEED 318
+ D ++ I VG Y ++ +K A + + ++ E+ L S + T ED
Sbjct: 113 NIIVSGNAADDIFDKIAVGNCYKVNAFKVKSAYQQYRVTGHDCELQLTKLSRIIEITGED 172
Query: 319 DSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSG 378
+PK Q S ++EI N+ VD++ ++ V P ++G T+++ + + D +
Sbjct: 173 --LPKIQASITTLAEIIFKPVNATVDILAVIFDVRPPQTFNCRDGTNTEKQTVLVVDDTM 230
Query: 379 RSVELTLWGDFC----NKEGQKL 397
+ VE+ LW +F NKEG+ +
Sbjct: 231 KMVEIGLWSEFVGKLDNKEGEAV 253
>gi|413948787|gb|AFW81436.1| hypothetical protein ZEAMMB73_509972 [Zea mays]
Length = 524
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 150/353 (42%), Gaps = 52/353 (14%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
L+D +GG + + F +I+ G VY +S +K A + + + N+ I +
Sbjct: 44 LIDEEGGSAHAQIYPPLAAVFKPMIKEGNVYNVSYVQIKKANRMYKPVDNDIMIGFTKWT 103
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIESAEN--NSIVDVIGIVISVNPSVPILRKNGMETQ 367
T++ E + P+ +S ++ + + +DVIG V ++ V +R +TQ
Sbjct: 104 TIEELIEVPPAFPEIVYSLTPFDQLTTLVDIREYFIDVIGAVTMIS-DVATIRTKMRQTQ 162
Query: 368 --RRILNLKDTSGRSVELTLWG--------DFCNKEGQ-KLQEMVDVGFFPVLSVKSGKV 416
+R + +++ S +E+ LWG D + GQ LQ ++ VG L+
Sbjct: 163 TAKRSVTIQNESCTPLEVVLWGGQATSFPADQISIAGQDSLQIIIFVG---TLARSYAGT 219
Query: 417 NDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISRE--IAAGGAKNEI- 473
+G S S + ++NP EA L AA++ R ++A G+ +
Sbjct: 220 TSLTGGS-----SCKWYVNPQVPEATSL----------AASLQHKRSPIMSAAGSTQRVP 264
Query: 474 ------HKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDS-FCYTACPLMIGDRQCNKKV 526
HK VS+IK+ + EK +W+ +T +K D + Y +C R+C KK
Sbjct: 265 RISTAEHKKVSEIKHLHPFKHEKVEWLVT---VTVLKIDQLWWYESC------RKCLKKT 315
Query: 527 TQSGNRWQC-DRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCP 578
G+ ++C D + + RY L D+ G T F + I+ P
Sbjct: 316 KPHGDAYKCSDSGCGHVGPPNPRYRLLITAGDEIGETDFILFGRMAQRIVKKP 368
>gi|116309010|emb|CAH66127.1| OSIGBa0135L04.1 [Oryza sativa Indica Group]
Length = 502
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 143/347 (41%), Gaps = 39/347 (11%)
Query: 223 IKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
I ARV+ D N G G +F DL LD G I + +D +++ +VY
Sbjct: 18 ILARVSRLWDFCDLN---GSGNIFHTDLVLLDQMGNSIHAQIYPPAIDSLRPLLKEQKVY 74
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENN 340
I +++ A + + + N I +T + E P FS S+I +
Sbjct: 75 YIDSFTVRYANRTYRPVDNSLMIVFSKWTTFEEYIEPAADFPGITFSLTPFSDIPHLVDK 134
Query: 341 SI--VDVIGIVISV-NPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD--------- 388
+I VDV+G++ V +P+V + ++ +R + + D S ++ +TLWG+
Sbjct: 135 TIFYVDVMGVITEVGSPTVVRPKSRNADSLKRTIQICDASNSTMPITLWGERADAFDANS 194
Query: 389 FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPST--QLFINPDFAEAHELRE 446
N + Q +V VG V D++G + S+ + ++N D E EL+E
Sbjct: 195 VYNAGQTQAQVIVFVGTL---------VKDYTGLGLTVTGSSPCKWYLNLDIPEVLELKE 245
Query: 447 WFDSGGKNAATVSISREIAAGGAKNEI-HKTVSQIKNEGLGRSEKPDWVTVRAFITFIKS 505
F + N VS A G ++ KT+ +I ++ ++
Sbjct: 246 SFSA---NFRPVSWVDNPATGYNQDTAEEKTIQEILALNPHKNRSTRFIVNVTVRRICSE 302
Query: 506 DSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRC-NQEIDECDYRYLL 551
+S+ Y +C R C + G+ ++C C N I + Y+ +L
Sbjct: 303 NSWWYNSC------RLCYRTSKPYGSSYKCSSCSNIGIPDPRYKVVL 343
>gi|226506010|ref|NP_001152059.1| retrotransposon protein [Zea mays]
gi|195652219|gb|ACG45577.1| retrotransposon protein [Zea mays]
Length = 525
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 149/388 (38%), Gaps = 37/388 (9%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNAVV 267
P+A L+P I+ RV K + R A DG + +L+ D G I A+
Sbjct: 5 PVAELHPQSTNVVIRVRVIRKWEFR---GATNDGPLQHINLVLADEQGTPIHAEIAAALA 61
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
+IE+ +VY + + + P++ F + N + I + + + P+ +
Sbjct: 62 VDKGSLIEIEKVYELKRFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQVFPRYIYK 121
Query: 328 FRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
IE +N ++DV+G++ +NP P L T R + +K+TS S+++TL
Sbjct: 122 LTCFENIEDNIDNRTYLIDVLGMLTQINP--PHLIGYNNSTIIRDIFIKNTSDMSLKITL 179
Query: 386 WG---------DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS-IGTIPSTQLFIN 435
WG D ++ + ++ VGF F G+ + + ++ + N
Sbjct: 180 WGNQASGFSINDVYSQSNNQPIVILLVGFL---------AKRFKGQPYLSSTTASSWYFN 230
Query: 436 PDFAEAHELREWFDSGG-KNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWV 494
P EA + + + EI N HKTV ++ + +
Sbjct: 231 PGIPEAQTYYNRLQNNDLQLIQPTAAEEEILLSQPPNLEHKTVEELLDIDPDMFPPEGYR 290
Query: 495 TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQ 554
+++ + Y +C +C+K +Q+ + C C + ++RY L
Sbjct: 291 CTVTISRIVENSKWWYPSC------SRCHKSSSQTSTGYHCTSCG--CTDINFRYKLSFI 342
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKEL 582
D T F +I+G P L
Sbjct: 343 ATDGTCEAEFFCFDSIARKIVGKPCDNL 370
>gi|242048790|ref|XP_002462141.1| hypothetical protein SORBIDRAFT_02g020420 [Sorghum bicolor]
gi|241925518|gb|EER98662.1| hypothetical protein SORBIDRAFT_02g020420 [Sorghum bicolor]
Length = 770
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 113/255 (44%), Gaps = 16/255 (6%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
++ ++P + W IK RV L +G L+D G I + + +F
Sbjct: 236 LSKIDPTRHNWTIKVRVARMWKLSSTPKWKG-VTAMELVLVDEQGMGITACVGHKDLTKF 294
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEA-TSTVDLCTEEDDSIPKQQFSFR 329
+ + GR Y+I K + + +N + N I+ T+ ++ T+ +P+ F+F
Sbjct: 295 ADALVEGRSYVIKKFQVSRHPRKYNPVPNPQTIYFTPWTAIEEIPTKLSTQLPRNVFNFV 354
Query: 330 HISEIESAENNSIVDVIGIVISVNPSV--------PILRKNGME--TQRRILNLKDTSGR 379
E+ N V +V + P V +LR NG+ T RR+L L+D S R
Sbjct: 355 DFEELGQRRRNEHGLVGDVVFGLLPDVIGQLTVIHLLLRSNGLNGVTVRRVLELRDLSDR 414
Query: 380 SVELTLWGDFCNK-EGQKLQEMVDVGFFPVLSVKSG-KVNDFSGKSI-GTIPSTQLFINP 436
+ +TLWG+ EG+ L E + P++ V +G +V + G + + T+ ++N
Sbjct: 415 LLHITLWGEHATSFEGESLTETI-AKDEPIVMVFAGVQVKQYLGSTTCASGGGTKWYMNI 473
Query: 437 DFAEAHELREWFDSG 451
D AE + R + G
Sbjct: 474 DLAEMNAFRARYLQG 488
>gi|149676198|dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
Length = 517
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 174/422 (41%), Gaps = 37/422 (8%)
Query: 214 LNPYQGRWAIKARVTAKGDLRRYN--NARGDGKVFSFDLL--DSDGGEIRVTCFNAVVDR 269
++P AIK R+ +R Y RG + + + D +G + V V++
Sbjct: 11 ISPMNTTSAIKVRL-----IRSYEVPERRGAASIKCQECIFHDKEGTVLHVNIPKEFVEK 65
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI-FLEATSTVDLCTEEDDSIPKQQFSF 328
+ ++++G+VY I + + +++ + F T +L +D P F
Sbjct: 66 YSAMLKIGQVYSIRNFLVISNFYTYKTSPHKYMLKFYYKTVVREL---KDIVFPSHMFRL 122
Query: 329 RHISEIESA---ENNSIVDVIGIVISVN-PSVPILRKNGMETQRRILNLKDTSGRSVELT 384
+ +S+++ ++D+IG+V+ +N P ++ G T+ L+DT G ++ T
Sbjct: 123 QPLSQLKQKIDINEKELIDLIGMVVEINTPQDKVI--AGKATRLIDFLLEDTEGTQIKCT 180
Query: 385 LWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG--KSIGTIPSTQLFINPDFAEAH 442
+W D +K Q +L KV+ +G K + TQ+++N DF E
Sbjct: 181 VWDDHVSKLEPFYQSTKQDPVIILLQFCRVKVDLSTGDIKVCSSFDVTQIWVNSDFPEFQ 240
Query: 443 ELREWFDSGGKNAATVSISREIAAGGAKNEIHK------TVSQIKNEGLGRSEKPDWVTV 496
E R+ ++ ++ G A + T+S+I + E D+
Sbjct: 241 EFRDRLKGEQTPMRSIVSMSNMSYGSAFEDFSSGQMNVFTISEIYQ----KKEYGDFWVA 296
Query: 497 RAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQ 556
+ S + Y +C CNKK+T + CD+C + E RY ++ +
Sbjct: 297 AKIVGIESSWDWFYVSCK----SHGCNKKLTLRNTLYDCDKCKRTWQEGILRYRVKVRAV 352
Query: 557 DQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEE 616
D G + + E+LG A +L + L+ +R I S V LFR+ +++E
Sbjct: 353 DLDGNAPFILWDKECTELLGISATDLR--QKILEGPLRIPREIESLVGLAMLFRIAVRKE 410
Query: 617 LY 618
+
Sbjct: 411 QF 412
>gi|413953613|gb|AFW86262.1| hypothetical protein ZEAMMB73_440412 [Zea mays]
Length = 629
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 158/373 (42%), Gaps = 56/373 (15%)
Query: 233 LRRYNNARGDGKVFSFD--LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPA 290
+ + + + + K+ D L+D +GG + + F +I+ G VY +S +K A
Sbjct: 163 MWEFYDPQDESKLLHADMVLIDEEGGSAHAQIYPPLAAVFKPMIKEGNVYNVSYVQIKKA 222
Query: 291 QKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAEN--NSIVDVIGI 348
+ + + N+ I +TV+ E + P+ +S ++ + + +DVIG
Sbjct: 223 NRMYKLVDNDIMIGFTKWTTVEELIEVPPAFPELVYSLTPFDQLTTLVDIREYFIDVIGA 282
Query: 349 VISVNPSVPILRKNGMETQ--RRILNLKDTSGRSVELTLWG--------DFCNKEGQ-KL 397
V ++ V +R +TQ +R + +++ S +E+ LWG D + GQ L
Sbjct: 283 VTMIS-DVATIRTKMRQTQTAKRSVTIQNESCTPLEVVLWGEQATSFPADQISIAGQDSL 341
Query: 398 QEMVDVGFFPVLSVKSGKVNDFSG-KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAA 456
Q ++ VG ++G S+ S + ++NP EA L AA
Sbjct: 342 QIIIFVGTL---------ARSYAGTTSLTCGSSCKWYVNPQVPEATSL----------AA 382
Query: 457 TVSISRE--IAAGGAKNEI-------HKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDS 507
++ R +A G+ + HK VS+IK+ + EK +W+ +T +K D
Sbjct: 383 SLQHKRSPIMAVAGSTQRVTRISTAEHKKVSEIKHMHPFKHEKVEWLIT---VTVLKIDQ 439
Query: 508 -FCYTACPLMIGDRQCNKKVTQSGNRWQC-DRCNQEIDECDYRYLLQAQIQDQTGLTWVT 565
+ Y +C R+C KK G+ ++C D + + RY L D+TG T
Sbjct: 440 LWWYESC------RKCLKKTKPHGDAYKCSDSGCGHVGPPNPRYRLLITAGDETGETDFI 493
Query: 566 AFQESGEEILGCP 578
F + I+ P
Sbjct: 494 LFGRMAQHIVKKP 506
>gi|323455451|gb|EGB11319.1| hypothetical protein AURANDRAFT_61710 [Aureococcus anophagefferens]
Length = 622
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 21 KPLVQVMDIKLIG--STQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDY 78
+P++Q +D++ T +RYR L+SD+V M +LN V G + KG +V+L+DY
Sbjct: 23 RPVLQALDVRNSAKEGTADRYRVLVSDTVHFLRCMAVAKLNALVTDGHLVKGCLVRLLDY 82
Query: 79 ICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSES 113
+ +QNR +I++L++E + E +G+P+ + ES
Sbjct: 83 RVTWIQNRAVIILLDLEVLSGAMERVGSPQNYPES 117
>gi|298710030|emb|CBJ31748.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 212
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 14/203 (6%)
Query: 37 ERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKIIVVLNMET 96
+R+R ++SD +MLATQ N+ + +G +K+ ++ L DYI + VQN+++I++L ++
Sbjct: 7 DRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDV 66
Query: 97 IILDCEPIGNPKIFSE--SELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNS------ 148
IG+P FSE S Q+ ++ S PN+G +
Sbjct: 67 TSGPTPKIGDPINFSEDSSAGVKQELGGGSSNNNTGNYGGGSKPNTGGYGAGRDVKPKVA 126
Query: 149 ----GTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPN--FRNHGPILKN 202
G N Q ++ + G+ P N N GP+ +
Sbjct: 127 NNPYGAANKQANNPYAGGGNNNSYGGGGGNYGGGGGARDGAANNPYANRGSSNSGPVQRQ 186
Query: 203 EAPARIIPIAALNPYQGRWAIKA 225
+ +PI+A+NPYQ RW IKA
Sbjct: 187 SQDSAYMPISAINPYQNRWTIKA 209
>gi|241582412|ref|XP_002403804.1| conserved hypothetical protein [Ixodes scapularis]
gi|215500267|gb|EEC09761.1| conserved hypothetical protein [Ixodes scapularis]
Length = 158
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 73/123 (59%), Gaps = 6/123 (4%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLI-GSTQERYRFLISDSVSTQ-HAMLATQL 58
M LT ++ I G+ KP++QV++ K I G+T +RYR L+SD V +AML TQL
Sbjct: 1 MASPLTGGAVERILNGETVDKPVLQVLNFKPIAGNTTDRYRLLLSDGVKCHTYAMLGTQL 60
Query: 59 NDRVKTGQVKKGSVVQLIDYICSTVQ-NRKIIVVLNMETIILDCE---PIGNPKIFSESE 114
N ++ ++++ +VVQL Y+C+T+ +KI+++L + I + +GNP + S +
Sbjct: 61 NSKIIDKEIERFAVVQLDKYMCNTISPEKKILIILELTVIANGADVGSKLGNPVMPSSTG 120
Query: 115 LTA 117
A
Sbjct: 121 AAA 123
>gi|414589167|tpg|DAA39738.1| TPA: hypothetical protein ZEAMMB73_875706 [Zea mays]
Length = 487
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 64/244 (26%)
Query: 388 DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREW 447
D + GQ+L +MVD P++++KS KV+DF G S+ TI + L INPD EA L W
Sbjct: 214 DLATRTGQELLDMVDSS--PIVAIKSLKVSDFQGVSLPTIGRSTLEINPDLLEAKNLMSW 271
Query: 448 FDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDS 507
+ S GK+ + IS E AG + K + + R F++ I SD
Sbjct: 272 YVSEGKDISLAPISAE--AGATRAGGFKYM----------------YSDRVFLSHITSD- 312
Query: 508 FCYTACPLMIGDRQCNKKVTQS-GNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTA 566
P M +KVT+ G+ + C+ C + EC L A D W+
Sbjct: 313 ------PAM-----GQEKVTEVFGSGYWCEGCQKNDSECS----LSADELD-----WIR- 351
Query: 567 FQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKI 626
+E G+ Y+LK ++ + ++FR+ + ++ Y +E+R +I
Sbjct: 352 -KEEGDNS--------YVLK------------LKEATWVPHMFRVSVTQDEYMNEKRQRI 390
Query: 627 TVIR 630
T+ R
Sbjct: 391 TMDR 394
>gi|195572615|ref|XP_002104291.1| GD20884 [Drosophila simulans]
gi|194200218|gb|EDX13794.1| GD20884 [Drosophila simulans]
Length = 268
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 23/247 (9%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I PI +L P +IKARV K ++ +++ G V+ LLD + GEI F
Sbjct: 40 IQPICSLTPGIYSSSIKARVIWKSEITQWSTGTKTGIVYIMHLLD-ESGEITGIVFADYD 98
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDL--CTEEDDSIPKQQ 325
+ FY+ I+ G VY IS ++ A ++ N +++F + + L C + IP+++
Sbjct: 99 NGFYDQIQPGLVYHISGFEVEKAISSYKVSDNPYQLFFRPNTVLQLSACGQ----IPREK 154
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
++F + ++ S + VD IGI V L + G R IL L D V L L
Sbjct: 155 YNFLPLLKVSSKADEDPVDAIGICTEVGR----LEERGGYFIREIL-LVDPDNHPVMLNL 209
Query: 386 W-GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGTIPSTQLFINPDFAEAHE 443
W + N GQ V+ VK + + + + T + INPD +A +
Sbjct: 210 WQKEAVNFVGQPTD---------VIVVKGARARFHNNEMKLNASWYTNVQINPDIPDATD 260
Query: 444 LREWFDS 450
L W+++
Sbjct: 261 LLAWYNN 267
>gi|414877599|tpg|DAA54730.1| TPA: hypothetical protein ZEAMMB73_628014 [Zea mays]
Length = 495
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 149/391 (38%), Gaps = 39/391 (9%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNA 265
II + L+P I+ RV K + R A DG + +L+ D G I A
Sbjct: 6 IIYMTELHPQSTNVVIRVRVIRKWEFR---GATNDGPLQHINLVLADEQGTSIHAEIAAA 62
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQ 325
+ +IE+ +VY + + + P++ F + N + I + + + P+
Sbjct: 63 LAVDKGSLIEIEKVYELKRFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQMFPRYI 122
Query: 326 FSFRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVEL 383
+ IE +N ++DV+G++ ++P P L T R + +K+ S S+++
Sbjct: 123 YKLTSFENIEDNIDNRTYLIDVLGMLTQIDP--PHLIGYNNSTIIRDIYIKNASDMSLKI 180
Query: 384 TLWG---------DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI--GTIPSTQL 432
TLWG D N+ + ++ VGF F G+ GT S+
Sbjct: 181 TLWGNQASNFSISDVYNQSSNQPIVILLVGFL---------AKRFKGQPYLSGTTASSWY 231
Query: 433 FINPDFAEAHELREWFDSGGKNAATVSISR-EIAAGGAKNEIHKTVSQIKNEGLGRSEKP 491
F NP EA + + ++ EI N HKTV ++ +
Sbjct: 232 F-NPGIPEAQTYYNRLQNNDLQLIQPTAAKEEIQVSQPPNLEHKTVEELLDIDPDMFPPE 290
Query: 492 DWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLL 551
+ +++ + Y +C +C+K +Q+ + C C + ++RY L
Sbjct: 291 GYRCTVTISRIVQNSKWWYPSC------SRCHKSSSQTSTGYHCTSCG--CTDINFRYKL 342
Query: 552 QAQIQDQTGLTWVTAFQESGEEILGCPAKEL 582
D T F +I+G P L
Sbjct: 343 SFIATDGTCEAEFFCFDSIARKIVGKPCDNL 373
>gi|414877600|tpg|DAA54731.1| TPA: hypothetical protein ZEAMMB73_628014, partial [Zea mays]
Length = 489
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 149/391 (38%), Gaps = 39/391 (9%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNA 265
II + L+P I+ RV K + R A DG + +L+ D G I A
Sbjct: 6 IIYMTELHPQSTNVVIRVRVIRKWEFR---GATNDGPLQHINLVLADEQGTSIHAEIAAA 62
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQ 325
+ +IE+ +VY + + + P++ F + N + I + + + P+
Sbjct: 63 LAVDKGSLIEIEKVYELKRFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQMFPRYI 122
Query: 326 FSFRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVEL 383
+ IE +N ++DV+G++ ++P P L T R + +K+ S S+++
Sbjct: 123 YKLTSFENIEDNIDNRTYLIDVLGMLTQIDP--PHLIGYNNSTIIRDIYIKNASDMSLKI 180
Query: 384 TLWG---------DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI--GTIPSTQL 432
TLWG D N+ + ++ VGF F G+ GT S+
Sbjct: 181 TLWGNQASNFSISDVYNQSSNQPIVILLVGFL---------AKRFKGQPYLSGTTASSWY 231
Query: 433 FINPDFAEAHELREWFDSGGKNAATVSISR-EIAAGGAKNEIHKTVSQIKNEGLGRSEKP 491
F NP EA + + ++ EI N HKTV ++ +
Sbjct: 232 F-NPGIPEAQTYYNRLQNNDLQLIQPTAAKEEIQVSQPPNLEHKTVEELLDIDPDMFPPE 290
Query: 492 DWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLL 551
+ +++ + Y +C +C+K +Q+ + C C + ++RY L
Sbjct: 291 GYRCTVTISRIVQNSKWWYPSC------SRCHKSSSQTSTGYHCTSCG--CTDINFRYKL 342
Query: 552 QAQIQDQTGLTWVTAFQESGEEILGCPAKEL 582
D T F +I+G P L
Sbjct: 343 SFIATDGTCEAEFFCFDSIARKIVGKPCDNL 373
>gi|302755953|ref|XP_002961400.1| hypothetical protein SELMODRAFT_403248 [Selaginella moellendorffii]
gi|300170059|gb|EFJ36660.1| hypothetical protein SELMODRAFT_403248 [Selaginella moellendorffii]
Length = 191
Score = 68.9 bits (167), Expect = 8e-09, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 42/212 (19%)
Query: 420 SGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQ 479
+GKSI + L ++P+ + L EW + V ++ N K V+
Sbjct: 14 NGKSISVTCGSTLLVDPELEDVSWLCEWMVASYNTTIFVHVT---------NSSSKAVTS 64
Query: 480 IKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRC 538
+K ++ F Y AC ++ QC KKVTQ S + WQ + C
Sbjct: 65 VKE--------------------FQTGDFYYPACVKVVNGSQCGKKVTQVSESMWQWNSC 104
Query: 539 NQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDD-----V 593
+ + + ++Y L I D T W AF ++ EI+ PA ++ LQDD +
Sbjct: 105 DTDSGDIYFKYALHLCILDSTRHIWAVAFDDAANEIVRMPACKM----AALQDDDYTVFL 160
Query: 594 RFGEIIRSRVFNQYLFRLKIKEELYGDEQRVK 625
+ IRS+++N ++ K E Y D +++K
Sbjct: 161 AVMDSIRSKMYN---LKICYKLESYKDTEKLK 189
>gi|322783921|gb|EFZ11105.1| hypothetical protein SINV_13954 [Solenopsis invicta]
Length = 301
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 34/159 (21%)
Query: 210 PIAALNPYQGR--WAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
PIA LN GR IKAR K ++ +NN R GK F L+D+ G+I T F +V
Sbjct: 147 PIAKLN---GRDSGVIKAREIEKSQVKLWNNNRRRGKYFFITLIDA-SGKISCTAFQDMV 202
Query: 268 DRFYEII---------------------------EVGRVYLISKGSLKPAQKNFNHLKNE 300
D+F+ +I +VG VY +S+ LK A K FN KN
Sbjct: 203 DKFFNLIVVSVPCAESDVSDDRANLPFQPFHLILQVGNVYHVSRCHLKKADKRFNTTKNN 262
Query: 301 WEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAEN 339
+E+ + + ++ C + S+P F+F I++I+S +N
Sbjct: 263 YELIVHFFTRLEPC-HDHYSVPTIWFNFSTINQIKSKKN 300
>gi|391327595|ref|XP_003738283.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 296
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 109/232 (46%), Gaps = 10/232 (4%)
Query: 223 IKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLI 282
I+ RV ++ +R ++ +G +FSF + DS +I V + +E I VG+ Y+I
Sbjct: 51 IQGRVESESPIRSWSREGAEGIIFSFIVNDS-SSDINVVASGEICAELHEKISVGKCYVI 109
Query: 283 SKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSI 342
S LK +N ++ EI L S V ++P+ +F ++EI S+ NS+
Sbjct: 110 SAFKLKKINPQYNITSHQLEIQLTKISKVTEII--GINLPENTTNFITLAEIGSSAVNSM 167
Query: 343 VDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVD 402
VD++GI+ V + ++G +++ + + D + + V L+LW + + + V
Sbjct: 168 VDILGIIHEVADEQNFMCRDGTSRKKKNVRIVDDTKKIVTLSLWSEHADILNGMESQCVS 227
Query: 403 VGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKN 454
+ + KV + T ST + A++ L++W++ G++
Sbjct: 228 IHNVVIRVFNMKKV-------LTTTSSTSAKLAVITADSERLQKWWNEEGQD 272
>gi|413950218|gb|AFW82867.1| hypothetical protein ZEAMMB73_164578, partial [Zea mays]
Length = 73
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 377 SGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINP 436
SGRS+ +TL G FC+ EG++LQE D G PV+++K V DF G+S+ +I TQ I P
Sbjct: 1 SGRSISITLCGKFCDVEGRQLQEQCDSGLNPVIALKGACVTDFVGRSLSSIGPTQFKIYP 60
Query: 437 DFAEAHEL 444
DF E L
Sbjct: 61 DFHETFFL 68
>gi|115440927|ref|NP_001044743.1| Os01g0838100 [Oryza sativa Japonica Group]
gi|56784643|dbj|BAD81690.1| helicase-like protein [Oryza sativa Japonica Group]
gi|113534274|dbj|BAF06657.1| Os01g0838100 [Oryza sativa Japonica Group]
Length = 474
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 168/419 (40%), Gaps = 39/419 (9%)
Query: 214 LNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVDRFY 271
++P W I+A++ D Y D DL +D G + D+F
Sbjct: 48 ISPASRGWKIRAKIARMWD---YTGTADDLPPIHVDLVLIDEKGNAMYAEIPGVEADKFR 104
Query: 272 EIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHI 331
+++ +VY SK + P++ + N++ I L + V+ E P F+
Sbjct: 105 PLLQESKVYTFSKFLILPSKPAYKPFPNKYMIKLTPWTNVEQVNEVPADFPSHVFNLVQF 164
Query: 332 S--EIESAENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELTLWG- 387
S + DVIG++I V+ + + +T +R++ L+D + V+L LWG
Sbjct: 165 SYLSLRVGMQEYFTDVIGMIIGVSKLAYVRMASKTSDTPKRVIALRDLANCEVKLVLWGE 224
Query: 388 ---DFCNKEGQKL-QEMVDVGFFPVLSVKS-GKVNDFSGKSIGTIPSTQLFINPDFAEAH 442
DF + Q+ VG F +K+ SG S + + ++N D
Sbjct: 225 HAPDFDADAVHSVGQDNAVVGIFVDTLMKAYNNEETLSGGS-----ACKWYLNEDIP--- 276
Query: 443 ELREWFDSGGKNAATVS-ISREIAAGGAKNEI----HKTVSQIKNEGLGRSEKPDWVTVR 497
E+ ++FDS G +A + IS + G+ HK+V+ +K + +
Sbjct: 277 EINQFFDSLGDSAPKIQWISTGAESFGSSQRPARLEHKSVADLKKIDPWEAAGAGFSCTV 336
Query: 498 AFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDR-CNQEIDECDYRYLLQAQIQ 556
S S+ +++C +C++ T G+ ++C C+ YR L
Sbjct: 337 TIAKLSPSQSWWFSSC------SRCHRAATAYGSSYKCSSGCSSVTAIPKYRLCLIG--T 388
Query: 557 DQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKE 615
D T F ++++G P L +K++ + D + I + V ++ F + + E
Sbjct: 389 DGTNSAEFVLFGRVAQQVVGRPVMNL--IKFQGRSD-NIPKEIAAVVSQKFTFAVSVTE 444
>gi|41393261|gb|AAS01984.1| expressed protein, with alternative splicing isoforms [Oryza sativa
Japonica Group]
Length = 545
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 162/424 (38%), Gaps = 43/424 (10%)
Query: 220 RWAIKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVDRFYEIIEVG 277
RW ++ R T + A K+ DL LD G + V +F +++ G
Sbjct: 15 RWRVRVRATR---FSEFTTANEPDKILRLDLVLLDEQGDMMDAQIPGRRVVQFKPLLKEG 71
Query: 278 RVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESA 337
VY I + A+ + + A +TV T + P E+ +
Sbjct: 72 AVYYIKYFEVAEARPQYRPVDRLLMAKFTAHTTVTEDTGPPSTFPSYACKILSFDELRAR 131
Query: 338 --ENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGR-SVELTLWGDFCNK-E 393
+ + I D IGI+ ++ P + M+ +LN T+GR +V + LWG +
Sbjct: 132 AYKKDIISDAIGIMTAIGPVQTVSYAGVMKA---VLNDHITNGRETVVVALWGPHATQFH 188
Query: 394 GQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGK 453
+ LQ+ D G +L V G F + + ST P+ A E S
Sbjct: 189 AENLQQQADNGHVVMLFV--GLTVKFRDRQLALQGSTVCRWYPN-APIQETISLISSLHG 245
Query: 454 NAATVSISREIAAG-GAKNEIHKTVSQI----KNEGLGRSEKPDWVTVRAFITFIKSDSF 508
N V R I A G K I+ VS I +E LG S +V + ++ +
Sbjct: 246 NPQVV---RMIEANFGQKEAINVKVSDICDLNPHEALGNS----YVVNIIIRDLVPAEPW 298
Query: 509 CYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQA-----QIQDQTGLTW 563
Y AC + + GN ++C RC+ + E YR ++ DQ
Sbjct: 299 WYIAC------STYKRGTAREGNAYKCPRCSTDAIETRYRVVIMGIDPSDLANDQAKAAE 352
Query: 564 VTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQR 623
T F E GE+++G P L + +D V I++ QY+ R + G QR
Sbjct: 353 FTFFGEIGEQLIGRPVLNLVASVHGARDIV--PPEIKAIFGRQYVIRTSVSR---GSLQR 407
Query: 624 VKIT 627
+++
Sbjct: 408 NRVS 411
>gi|70936883|ref|XP_739325.1| replication factor a protein [Plasmodium chabaudi chabaudi]
gi|56516237|emb|CAH77169.1| replication factor a protein, putative [Plasmodium chabaudi
chabaudi]
Length = 255
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 30/234 (12%)
Query: 421 GKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAA-TVSISREIAAGGAKN-EIHKTVS 478
GK + + P T++ I+P+ +A+ L+ W+ + KN T++++ + N E KT+
Sbjct: 2 GKKLESHPKTKVEIDPELDKAYTLKNWWANNKKNVYNTINLATSTSNNNMLNLESQKTIQ 61
Query: 479 QI-KNEGLGRSE----KPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKK----VTQS 529
+I KN L E K T FI I + Y+ACP CNKK V +
Sbjct: 62 EIKKNVNLANEEVLSGKGIIFTTFGFIDHIYNSIPVYSACP------NCNKKMVATVIED 115
Query: 530 GNR---------WQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEIL-GCPA 579
G + C +CN+ + Y Y + +I D T V+AF + + I+ G A
Sbjct: 116 GEQDMDENVSESMYCSKCNKN-NIPVYNYSINLKITDNTDSLRVSAFANAAKTIMNGLSA 174
Query: 580 KELYMLKYEL--QDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRA 631
+E L+ E Q+++ ++I N++ FR+K + DE + T++
Sbjct: 175 EEFMKLRQEHISQENIENFDLIEKAKLNEFFFRIKAYMTSHMDEIKKNYTILET 228
>gi|321477092|gb|EFX88051.1| hypothetical protein DAPPUDRAFT_96245 [Daphnia pulex]
Length = 270
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 5/181 (2%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I + L+P RW I+ RV + R +GD +F F LLDS G ++V F
Sbjct: 37 FIDVNKLSPDLRRWKIRGRVCR---ISRLFPFKGDRNMFYFGLLDS-SGLLKVKAFGGDA 92
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D++Y I+E G ++ I + A+ N ++E+ L S VD E+DD+ P+ +
Sbjct: 93 DKYYGIVEEGEMFSIEYARVSVAKNPNNIFPLKFEVILAKESEVDRL-EQDDTFPRLKVV 151
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
+ ++ + + D+ IV V + + + + + + G +V++TLW
Sbjct: 152 KYDLKKVRDLPHGTFFDIEVIVYKAGCVVDVRKGELRKLELEVFDASMKPGETVKVTLWN 211
Query: 388 D 388
D
Sbjct: 212 D 212
>gi|413952523|gb|AFW85172.1| hypothetical protein ZEAMMB73_007991 [Zea mays]
Length = 504
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/389 (20%), Positives = 152/389 (39%), Gaps = 37/389 (9%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNAVV 267
PIA L+P AI+ R+ K + R A DG + +L+ D G I A+V
Sbjct: 5 PIAELDPRSTNAAIRVRIIRKWEFR---GATNDGPLRHVNLILADEQGTTIHAEIQAALV 61
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
+I++ +VY + + + P++ + + N I + + + + P+ +
Sbjct: 62 ADKDSLIQIDKVYELKRFRVAPSRNYYKPVDNSMMIQFTLYTQAKVVKDPPPNFPRYAYK 121
Query: 328 FRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
+I +N ++DV+GI+ + S+ + N R I LKD + S ++TL
Sbjct: 122 LTSFEDISDNVDNKTYLIDVLGILTEIG-SLHHVGYNNSNIIRDIF-LKDINNASTKVTL 179
Query: 386 WG---------DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS-IGTIPSTQLFIN 435
WG + C++ K ++ VG F G++ + + + N
Sbjct: 180 WGHQASSFSVDNICDENDNKPVVILFVGCL---------AKRFKGEAYLSATAACTWYFN 230
Query: 436 PDFAEAHEL-REWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWV 494
PD EA + ++ + + E+ A N KT+ ++ + +
Sbjct: 231 PDIPEAQMYYNKLLNTKLHMIRPQATAEELQASQTPNIEDKTIEELLQLDPDMFPEQGFR 290
Query: 495 TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQ 554
+++ + + +C +CNK +Q+ +QC CN E ++RY L
Sbjct: 291 CTVTISRLVQNGRWWFPSC------IKCNKSSSQTSTGYQCTSCNGT--ETEFRYKLSFI 342
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKELY 583
D T F I+G + L+
Sbjct: 343 ATDGTSEAEFFCFDTIARRIVGKSCQTLF 371
>gi|357450467|ref|XP_003595510.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
gi|355484558|gb|AES65761.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 549
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 186/435 (42%), Gaps = 31/435 (7%)
Query: 204 APARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFD--LLDSDGGEIRVT 261
AP +I I+ ++P + W I+ RV +R + + D +S + L+D+ G I +
Sbjct: 2 AP-KIDLISDISPSKENWNIRVRVVRLWFVR---DMKKDQLPYSLEMVLMDNKGDRINAS 57
Query: 262 CFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSI 321
++ ++ + + RV+ I S+ ++ ++ ++I + + + C +D +
Sbjct: 58 VRRTLIYKYEKELREDRVFSIGNFSVASNVGSYRTARHPYKINFQYGTKIKQC--DDKFV 115
Query: 322 PKQQFSFRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGR 379
P + EI +E ++ ++DV+G++ +V R NG +++ + L D G
Sbjct: 116 PADIYVIGDSREIFQSEYDTDYLIDVMGMLKAVGVEKSYTR-NGSQSKMIPIEL-DYDGF 173
Query: 380 SVELTLWGDFCNKEGQKLQ--EMVDVGFFPVLSVKSGKVNDFSGKSI--GTIPSTQLFIN 435
++TL+G + ++ L E +V V++V K+ F G++ TI +T++ N
Sbjct: 174 RFKVTLFGPYVDELNAFLASGETENV----VVAVLLTKIKIFQGQATIQNTINATKVLFN 229
Query: 436 PDFAEAHELRE-WFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWV 494
P F A L++ ++ + +S E + + + EGL +
Sbjct: 230 PTFTAALLLKKRMVENDDSPSPGISKITEASKVSVEEDFLNLSPMTTVEGLKDCAEEKCF 289
Query: 495 TVRAFITFIKSDS-FCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQA 553
V + I DS + YT+C + CNKKV + C +CN+ + RY+++
Sbjct: 290 AVFGTVNVIVDDSDWWYTSCVV------CNKKVYPDEKMYFCSKCNKHVLNVTPRYMIKM 343
Query: 554 QIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKI 613
++ D T F E+ ++ D + I + V YLF+++
Sbjct: 344 RVVDHTDSATFVLFDRDAAELFKKTCADMIESCGMGTDASEVPKDILAMVEKSYLFKVET 403
Query: 614 ---KEELYGDEQRVK 625
+Y RVK
Sbjct: 404 NLGSSTMYEKSYRVK 418
>gi|358347814|ref|XP_003637946.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
gi|358347930|ref|XP_003638003.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
gi|355503881|gb|AES85084.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
gi|355503938|gb|AES85141.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 566
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 152/369 (41%), Gaps = 26/369 (7%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I P+AA+ + ++ RV + +NN D + LLD G+I+ + +V
Sbjct: 5 ITPVAAIVAGKINIKLRVRVVHVWTVSEFNNPNEDNSIHML-LLDDKLGKIQASAKKHLV 63
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATST---VDLCTEEDDSIPKQ 324
R +E G Y I + + ++ +++ L + +D T IP
Sbjct: 64 PRIRSNVEEGSTYDIENVLVTKNDPKYQVTQHRFKLNLIDNTKFFKIDAAT-----IPLN 118
Query: 325 QFSFRHISEIESAE-NNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVEL 383
F F +EI AE +VDVIG V+ + + NG ++ L L+D+ R V
Sbjct: 119 HFDFMPFNEILEAEREEKVVDVIGQVVERD-ELKERDVNGRRSKIMDLTLQDSESRRVHC 177
Query: 384 TLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG--KSIGTIPSTQLFINPDFAEA 441
TLW ++ + L D ++ ++ K+ + G T+L + D EA
Sbjct: 178 TLWANYAERMNSFLAAH-DPSSPVIVLIQQCKLKKYQGIMGVSNAFFGTKLLLEGDLPEA 236
Query: 442 HELREWFDSGGKNAATVSISREIAAGGAK--NEIHKTVSQIKNEGLGRSEKPDWVTVRAF 499
E + D GG + SIS+ + +++ +T + + +E+ + V A
Sbjct: 237 IEFKSKID-GGDVQVSQSISQNTTSTVVSLVDDMLQTKRMTIEDLIEATEQCQGI-VLAT 294
Query: 500 ITFIKSD-SFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQ 558
I I+S+ S+ Y AC +C +V R C +CN + R+ L Q+ D
Sbjct: 295 ICGIESEYSWYYQACT------KCAGRVRTVAGRLYCGKCNTGRNAVP-RFKLHVQVMDN 347
Query: 559 TGLTWVTAF 567
TG T F
Sbjct: 348 TGSTSFILF 356
>gi|391329299|ref|XP_003739112.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Metaseiulus occidentalis]
Length = 214
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 5/181 (2%)
Query: 206 ARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
R + L Y G ++ RVT+K ++ ++ +GK+FSF L+ + I V
Sbjct: 38 TRFLKDVVLTRYGG--VLEGRVTSKTPIKEWSKNGKEGKLFSF-LMADETARISVIVSGD 94
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQ 325
D + I+V Y I+ KP +F+ +E E+ L S + E D IP+ Q
Sbjct: 95 KTDEVFSTIQVNHCYRITGFKPKPVNPHFSSTDHECEVTLSKISKIKEI--ERDDIPQTQ 152
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
I+ I + E N ++D+ I+ + P I ++G +++ L D S + V L L
Sbjct: 153 SLCSSIASILNIEKNCLIDLTAILFDLLPVQNITCRDGSIQKKQTALLVDDSKKIVSLDL 212
Query: 386 W 386
W
Sbjct: 213 W 213
>gi|385305381|gb|EIF49362.1| subunit of heterotrimeric replication protein a [Dekkera
bruxellensis AWRI1499]
Length = 100
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 171 NAGSIVRSFQPTVQPPYQPPPNFRNHGPIL---KNEAPARIIPIAALNPYQGRWAIKARV 227
NAG +S P V +N P K P + I L+PYQ W IKARV
Sbjct: 6 NAGQRSKSXSPGVVSSTSVKSEXKNXAPSSSRPKKAEPDNLYSIDQLSPYQNNWTIKARV 65
Query: 228 TAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCF 263
+ K D+R ++N RG+GK+F+ + LD + GEIR T F
Sbjct: 66 SYKSDMRTWSNQRGEGKLFNVNFLD-ETGEIRATGF 100
>gi|108712185|gb|ABF99980.1| expressed protein [Oryza sativa Japonica Group]
Length = 569
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 162/424 (38%), Gaps = 43/424 (10%)
Query: 220 RWAIKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVDRFYEIIEVG 277
RW ++ R T + A K+ DL LD G + V +F +++ G
Sbjct: 69 RWRVRVRAT---RFSEFTTANEPDKILRLDLVLLDEQGDMMDAQIPGRRVVQFKPLLKEG 125
Query: 278 RVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIES- 336
VY I + A+ + + A +TV T + P E+ +
Sbjct: 126 AVYYIKYFEVAEARPQYRPVDRLLMAKFTAHTTVTEDTGPPSTFPSYACKILSFDELRAR 185
Query: 337 -AENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGR-SVELTLWGDFCNK-E 393
+ + I D IGI+ ++ P + M+ +LN T+GR +V + LWG +
Sbjct: 186 AYKKDIISDAIGIMTAIGPVQTVSYAGVMKA---VLNDHITNGRETVVVALWGPHATQFH 242
Query: 394 GQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGK 453
+ LQ+ D G +L V G F + + ST P+ A E S
Sbjct: 243 AENLQQQADNGHVVMLFV--GLTVKFRDRQLALQGSTVCRWYPN-APIQETISLISSLHG 299
Query: 454 NAATVSISREIAAG-GAKNEIHKTVSQI----KNEGLGRSEKPDWVTVRAFITFIKSDSF 508
N V R I A G K I+ VS I +E LG S +V + ++ +
Sbjct: 300 NPQVV---RMIEANFGQKEAINVKVSDICDLNPHEALGNS----YVVNIIIRDLVPAEPW 352
Query: 509 CYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQA-----QIQDQTGLTW 563
Y AC + + GN ++C RC+ + E YR ++ DQ
Sbjct: 353 WYIACSTY------KRGTAREGNAYKCPRCSTDAIETRYRVVIMGIDPSDLANDQAKAAE 406
Query: 564 VTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQR 623
T F E GE+++G P L + +D V I++ QY+ R + G QR
Sbjct: 407 FTFFGEIGEQLIGRPVLNLVASVHGARDIV--PPEIKAIFGRQYVIRTSVSR---GSLQR 461
Query: 624 VKIT 627
+++
Sbjct: 462 NRVS 465
>gi|115456687|ref|NP_001051944.1| Os03g0855700 [Oryza sativa Japonica Group]
gi|108712184|gb|ABF99979.1| expressed protein [Oryza sativa Japonica Group]
gi|113550415|dbj|BAF13858.1| Os03g0855700 [Oryza sativa Japonica Group]
Length = 599
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 162/424 (38%), Gaps = 43/424 (10%)
Query: 220 RWAIKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVDRFYEIIEVG 277
RW ++ R T + A K+ DL LD G + V +F +++ G
Sbjct: 69 RWRVRVRATR---FSEFTTANEPDKILRLDLVLLDEQGDMMDAQIPGRRVVQFKPLLKEG 125
Query: 278 RVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIES- 336
VY I + A+ + + A +TV T + P E+ +
Sbjct: 126 AVYYIKYFEVAEARPQYRPVDRLLMAKFTAHTTVTEDTGPPSTFPSYACKILSFDELRAR 185
Query: 337 -AENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGR-SVELTLWGDFCNK-E 393
+ + I D IGI+ ++ P + M+ +LN T+GR +V + LWG +
Sbjct: 186 AYKKDIISDAIGIMTAIGPVQTVSYAGVMKA---VLNDHITNGRETVVVALWGPHATQFH 242
Query: 394 GQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGK 453
+ LQ+ D G +L V G F + + ST P+ A E S
Sbjct: 243 AENLQQQADNGHVVMLFV--GLTVKFRDRQLALQGSTVCRWYPN-APIQETISLISSLHG 299
Query: 454 NAATVSISREIAAG-GAKNEIHKTVSQI----KNEGLGRSEKPDWVTVRAFITFIKSDSF 508
N V R I A G K I+ VS I +E LG S +V + ++ +
Sbjct: 300 NPQVV---RMIEANFGQKEAINVKVSDICDLNPHEALGNS----YVVNIIIRDLVPAEPW 352
Query: 509 CYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQA-----QIQDQTGLTW 563
Y AC + + GN ++C RC+ + E YR ++ DQ
Sbjct: 353 WYIACSTY------KRGTAREGNAYKCPRCSTDAIETRYRVVIMGIDPSDLANDQAKAAE 406
Query: 564 VTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQR 623
T F E GE+++G P L + +D V I++ QY+ R + G QR
Sbjct: 407 FTFFGEIGEQLIGRPVLNLVASVHGARDIV--PPEIKAIFGRQYVIRTSVSR---GSLQR 461
Query: 624 VKIT 627
+++
Sbjct: 462 NRVS 465
>gi|297607725|ref|NP_001060485.2| Os07g0651500 [Oryza sativa Japonica Group]
gi|255678024|dbj|BAF22399.2| Os07g0651500 [Oryza sativa Japonica Group]
Length = 2021
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 144/356 (40%), Gaps = 46/356 (12%)
Query: 223 IKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
I ARV+ D N G G +F DL LD G I + +D +++ +VY
Sbjct: 1641 ILARVSRLWDFCDLN---GSGNIFHTDLVLLDQMGNSIHAQIYPPAIDSLRPLLKEQKVY 1697
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENN 340
I +++ A + + + N I +T + E P FS S+I + +
Sbjct: 1698 YIDSFTVRYANRTYRPVDNSLMIVFSKWTTFEEYIEPAADFPGITFSLTPFSDIPNLVDK 1757
Query: 341 SIV---------DVIGIVISV-NPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD-- 388
+I DV+G++ V +P+V + ++ +R + + D S ++ +TLWG+
Sbjct: 1758 TIFYVGLYGMQPDVMGVITEVGSPTVVRPKSRNADSLKRTIQICDASNSTMPVTLWGERA 1817
Query: 389 -------FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPST--QLFINPDFA 439
N + Q +V VG V D++G + S+ + ++N D
Sbjct: 1818 DAFDANSVYNAGQTQAQVIVFVGTL---------VKDYTGLGLTVTGSSPCKWYLNLDIP 1868
Query: 440 EAHELREWFDSGGKNAATVSISREIAAGGAKNEI-HKTVSQIKNEGLGRSEKPDWVTVRA 498
E EL+E F + N VS A G ++ KT+ +I ++ ++
Sbjct: 1869 EVLELKESFSA---NFRPVSWVDNPATGYNQDTAEEKTIQEILALNPHKNRSTRFIVNVT 1925
Query: 499 FITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRC-NQEIDECDYRYLLQA 553
+S+ Y +C R C + G+ ++C C N I + Y+ +L A
Sbjct: 1926 VRRICSENSWWYNSC------RLCYRTSKPYGSSYKCSSCSNIGIPDPRYKVVLIA 1975
>gi|413956258|gb|AFW88907.1| hypothetical protein ZEAMMB73_503872 [Zea mays]
Length = 553
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 146/391 (37%), Gaps = 33/391 (8%)
Query: 205 PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFN 264
P + + L+P I+ RV K + R N G + + L D G I
Sbjct: 30 PEFVKTLKELHPQSTNVVIRVRVIRKWEFRGATN-DGPLQYINLVLADEQGTPIHAEIAA 88
Query: 265 AVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQ 324
A+ +IE+ +VY + + + P++ F + N + I + + + P+
Sbjct: 89 ALAVDKGSLIEIEKVYELKRFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQVFPRY 148
Query: 325 QFSFRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVE 382
+ IE +N ++DV+G++ +NP P L T R + +++TS S++
Sbjct: 149 IYKLTCFENIEDNIDNRTYLIDVLGMLTQINP--PHLIGYNNSTIIRDIFIENTSDMSLK 206
Query: 383 LTLWG---------DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS-IGTIPSTQL 432
+TLWG D N+ + ++ VGF F G+ + + ++
Sbjct: 207 ITLWGNQASSFSISDVYNQSNNQPIVILLVGFL---------AKRFKGQPYLSSTTASSW 257
Query: 433 FINPDFAEAHELREWFDSGG-KNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKP 491
+ NP EA + + + EI N KTV ++ N
Sbjct: 258 YFNPGIPEAQTYYNRLQTNDLQLIQPTAAEEEILLSQPPNLEQKTVEELLNIDPDMFPPE 317
Query: 492 DWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLL 551
+ +++ + Y +C +C+K +Q+ + C C + ++RY L
Sbjct: 318 GYRCTVTISRIVQNSKWWYPSC------SRCHKSSSQTSTGYHCTSCG--CTDINFRYKL 369
Query: 552 QAQIQDQTGLTWVTAFQESGEEILGCPAKEL 582
D T F +I+G P L
Sbjct: 370 SFIATDGTCEAEFFCFDSIARKIVGKPCDNL 400
>gi|413923515|gb|AFW63447.1| hypothetical protein ZEAMMB73_293789 [Zea mays]
Length = 520
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 152/386 (39%), Gaps = 31/386 (8%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNAVV 267
PIA L+P AI+ R+ K + R A DG + +L+ D G I A+V
Sbjct: 5 PIAELDPKSTNAAIRVRIIRKWEFR---GATNDGPLRHVNLILADEQGTAIHAEIQAALV 61
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D +I++ +VY + + + P++ + + N I + + + + P+ +
Sbjct: 62 DDKGSLIQIDKVYELKRFRVTPSRNYYKPVDNSMMIQFTLYTQAKVVEDPPPTFPRYAYK 121
Query: 328 FRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
I + +N ++DV+GI+ + S+ + N R I LKD + S ++TL
Sbjct: 122 LTSFENIGNNVDNKTYLIDVLGILTEIG-SLHHVGYNNSNIIRDIF-LKDINNTSTKVTL 179
Query: 386 WGDFC------NKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS-IGTIPSTQLFINPDF 438
WG N + V V F L+ + F G++ + + + NPD
Sbjct: 180 WGHQASSFSVDNIYDDNDNKPVVVLFVGCLAKR------FKGEAYLSATAACTWYFNPDI 233
Query: 439 AEAH-ELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVR 497
EA + ++ + + +E+ A N KT+ ++ + +
Sbjct: 234 PEAQVYYSKLLNTKLQMIRPQATEKELQASQTLNIEDKTIEELLQLDPDMFPEHGFKCTV 293
Query: 498 AFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQD 557
++ + + +C +CNK +Q+ +QC CN E +RY L D
Sbjct: 294 TISRLVQDGRWWFPSC------IKCNKSSSQTSTGYQCTSCNGT--ETGFRYKLNFIATD 345
Query: 558 QTGLTWVTAFQESGEEILGCPAKELY 583
T F + I+G + L+
Sbjct: 346 GTSEAEFFCFDSIAKRIVGKSCQTLF 371
>gi|195499029|ref|XP_002096774.1| GE24867 [Drosophila yakuba]
gi|194182875|gb|EDW96486.1| GE24867 [Drosophila yakuba]
Length = 189
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
LLD + GEI FN +V+ FY I+ G VY+ S ++ A++ N +++FL +
Sbjct: 3 LLD-ESGEITGVVFNNLVNVFYASIQTGLVYIFSGFEVRQAEQRLKVSDNPYQVFLLGNT 61
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRR 369
V+L D IP+++++F +S++ S + VD IGI V L R
Sbjct: 62 VVELSAS--DRIPREKYNFLPLSKVSSILDMEPVDAIGICSEVRE----LDNRAGYFIRE 115
Query: 370 ILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIGTIP 428
IL L D + V L LW K+ + D V+ VK + + + +
Sbjct: 116 IL-LVDHDYQCVMLNLW----EKQAVNFEGKPD----DVIVVKGARAQTHNNEIKLNAGW 166
Query: 429 STQLFINPDFAEAHELREWFDS 450
T + INPD EA + EW+D+
Sbjct: 167 YTNVQINPDNPEATSMLEWYDN 188
>gi|321460652|gb|EFX71693.1| hypothetical protein DAPPUDRAFT_111469 [Daphnia pulex]
Length = 302
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 5/181 (2%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I + L+P RW I+ RV + R +GD +F F LLDS G ++V F
Sbjct: 37 FIDVNKLSPDLRRWKIRGRVCR---ISRLFPFKGDRNMFYFGLLDS-SGLLKVKAFGGDA 92
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D++Y I+E G ++ I + A+ N ++E+ L S V+ E+DD+ P+ +
Sbjct: 93 DKYYGIVEEGEMFSIEYARVSVAKNPNNIFPLKFEVILAKESEVERL-EQDDTFPRLKVV 151
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
+ ++ + + D+ IV V + + + + + + G +V++TLW
Sbjct: 152 KYDLKKVRDLPHGTFFDIEVIVYKAGCVVDVRKGELRKLELEVFDASMKPGETVKVTLWN 211
Query: 388 D 388
D
Sbjct: 212 D 212
>gi|215687058|dbj|BAG90904.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215694034|dbj|BAG89233.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 192
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 8/188 (4%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVD 268
I+ L P I ARV+ R N+ D + DL LD G V + ++
Sbjct: 6 ISQLYPGDSDKKILARVSRLWHFRDLND---DTNILHTDLVLLDEVGNSTHVQMYRGAIE 62
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
+I G VY I ++K A + + + N++ I +T++ C + P FS
Sbjct: 63 VLKPLIHEGNVYYIESFTVKDANRTYRPVSNDFMILFSKWTTLEECIDIPADFPAITFSL 122
Query: 329 RHISEIESAENNSI--VDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTL 385
EI S + +I VD++G++ ++ + + R ++ +R L + D S ++ +TL
Sbjct: 123 TPFQEIPSLVDKNIFYVDIMGVITEISSTSTVRPRSRDADSLKRTLQICDASNSTLPVTL 182
Query: 386 WGDFCNKE 393
WGD E
Sbjct: 183 WGDRSTAE 190
>gi|242041189|ref|XP_002467989.1| hypothetical protein SORBIDRAFT_01g037705 [Sorghum bicolor]
gi|241921843|gb|EER94987.1| hypothetical protein SORBIDRAFT_01g037705 [Sorghum bicolor]
Length = 122
Score = 65.9 bits (159), Expect = 7e-08, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Query: 477 VSQIKNEGLGRSEKPDWVTVRAFITFIKSDS-FCYTACPLMIGDRQCNKKVTQS-GNRWQ 534
+S I ++ EKP + ++ A I+ IK + Y AC + C KVT++ G+ +
Sbjct: 15 LSHITSDPAMGQEKPVFFSLNAIISHIKPEQHMWYRAC------KTCCNKVTEAFGSGYW 68
Query: 535 CDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYE 588
+RCN+ EC RY++ ++ D G WV+ F E E+I+G A EL ++ E
Sbjct: 69 SERCNKNASECSLRYIMVIKVSDPNGEAWVSVFNEHAEKIIGYSADELDRIRKE 122
>gi|297736414|emb|CBI25137.3| unnamed protein product [Vitis vinifera]
Length = 115
Score = 65.9 bits (159), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 61/109 (55%)
Query: 541 EIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIR 600
E + +Y++ ++ D +G + F E E I GC A EL LK + ++ RF + ++
Sbjct: 2 EFESIRIQYIMVVKVSDDSGEACLALFNEQAERIFGCSADELDKLKSQEGEENRFQQKLK 61
Query: 601 SRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
++ +LFR+ + + Y +E+R IT V++++ESR LL+ ISK
Sbjct: 62 EAIWVPHLFRISVAQHEYMNEKRQWITARAVVAVDFAAESRLLLEEISK 110
>gi|242052139|ref|XP_002455215.1| hypothetical protein SORBIDRAFT_03g006365 [Sorghum bicolor]
gi|241927190|gb|EES00335.1| hypothetical protein SORBIDRAFT_03g006365 [Sorghum bicolor]
Length = 369
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 155/359 (43%), Gaps = 35/359 (9%)
Query: 243 GKVFSFDLLDSDG-GEIRVTCFNAV-VDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNE 300
G+V+ L DG G + C ++R + G+VY +S ++ + N
Sbjct: 18 GEVYGLHCLLIDGEGVVMQACARPWDMERLKHQLVEGKVYALSNFGVREKLDKYMACSNG 77
Query: 301 WEIFLEATSTVDLCTEE-DDSIPKQQFSFRHISEIESAENNS--IVDVIGIVISVNPSVP 357
I + A + V+ T+ SIP F F ++ S N+ DVIG ++S+
Sbjct: 78 LVISMGAQTVVNEITDHAGSSIPLHSFEFVDFGDLPSRNNDRSLFTDVIGQIVSIEDEGW 137
Query: 358 ILRKNGMET-QRRILNLKDTSGRSVELTLWGDFCN--------KEGQKLQEMVDVGFFPV 408
+ R ++L+D G+ + +TL+GD + K+GQK+ PV
Sbjct: 138 TWKWGAWRNISFRNIHLRDLGGKQLNVTLFGDLGSNFDAEQVFKQGQKV---------PV 188
Query: 409 LSVKSGK-VNDFSGKS-IGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAA 466
+++ +G V + G+ + + +++ +++ D E + R D K + +
Sbjct: 189 VAIFAGMLVEHYKGQLFLRSTSASKYYLDLDVEEVQKFRASLDGPYKPIDRLPCRLQKPL 248
Query: 467 GGAKN-EIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNK 524
+ + +T+ Q++N ++ W+ RA + I S+ + Y +C C+
Sbjct: 249 NPTELIDSWRTIKQLRNLNSDELQQRTWLC-RATLKGIDSNKGWSYQSC------FHCHH 301
Query: 525 KVTQSGNRWQCDR-CNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL 582
V+ G+++ C+ C RY L A I+D+T V F ++++G PA+EL
Sbjct: 302 SVSWDGSKFLCNYGCPNNKLSVRVRYKLDAVIKDETDSMNVMIFDGPAQKLVGVPAEEL 360
>gi|38346787|emb|CAE02205.2| OSJNBa0095H06.12 [Oryza sativa Japonica Group]
Length = 1724
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 120/282 (42%), Gaps = 25/282 (8%)
Query: 221 WAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNAVVDRFYEIIEVGR 278
W I+AR+ D Y D DL+ D G + D+F +++ +
Sbjct: 1261 WKIRARIARMWD---YTGTANDVPPMHVDLVLVDEKGNAMYAEIPGVEADKFRPLLQESK 1317
Query: 279 VYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIES-- 336
VY SK + P++ + N++ I L + V+ E P F+ S++
Sbjct: 1318 VYTFSKFLVLPSKPAYKPFPNKYMIKLTPWTNVEQVNEVPADFPSHVFNLVQFSDLSQRV 1377
Query: 337 AENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELTLWG----DFCN 391
DVIG++I V+ + + +T +R++ L+D + V+L LWG DF
Sbjct: 1378 GMQEYFTDVIGMIIGVSKLAYVRMASKTSDTPKRVIALRDLANCEVKLVLWGEHALDFDA 1437
Query: 392 KEGQKL-QEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDS 450
+ Q+ V VG F G + K++ + + ++N D E+ ++FDS
Sbjct: 1438 DAVHSVGQDNVVVGIF------VGTLMKAYNKTLSGGSACKWYLNEDIP---EINQFFDS 1488
Query: 451 GGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPD 492
G +A + + I+AG + +Q++++ + +K D
Sbjct: 1489 LGDSAPKI---QWISAGAKSFGSSQRPAQLEHKSVADLKKID 1527
>gi|77552440|gb|ABA95237.1| hypothetical protein LOC_Os11g44840 [Oryza sativa Japonica Group]
Length = 757
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 172/430 (40%), Gaps = 72/430 (16%)
Query: 204 APARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFD-----LLDSDGGEI 258
AP+ +I AL P RW IK +V R +A V F +LD++G I
Sbjct: 2 APSNLI--TALTPKNDRWRIKVKVI------RLWDAVNPTMVDEFYGIQMIVLDAEGNSI 53
Query: 259 RVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEED 318
V+ + + F I++ +Y + K + LKN +I
Sbjct: 54 HVSISKQLANHFRPKIKINSIYTFKNFKVMEHDK-YRVLKNNLKILFYH----------- 101
Query: 319 DSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNP-SVPILRKNGMETQRRILNLKDTS 377
D+I K+ + +DVIG++ + P +L KN ++ R+ N+++
Sbjct: 102 DTIVKETCLY--------------LDVIGLLSGMKPIEQRMLGKNT--SRERVCNMREIE 145
Query: 378 GR-----SVELTLWGDFCNKEGQKLQEMVD---VGFFPVLSVKSGKVNDFSGK-SIGTIP 428
V++TLWGD L MVD +G V V ++ S G
Sbjct: 146 LLLLEGEKVKITLWGDI-------LANMVDDDLLGKQTVFIATGLLVKEYEKLLSFGVTS 198
Query: 429 STQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEI----HKTVSQIKNEG 484
ST++F++ + + E+ + + I + + G E KT+ +I
Sbjct: 199 STEVFLDMEIPASMEILSRHN--AEKVLPTMIEVDASTQGTIEEQMFYNRKTLKEITELR 256
Query: 485 LGRSEKPDWV-TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEID 543
++ +++ TV+A I IKS ++ Y +C +C + N + C+ C +E
Sbjct: 257 YSNIQQKEFICTVKAKIEEIKSRNWWYMSCD------KCFCGTRKESNVYICNSCGKEAV 310
Query: 544 ECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRV 603
RY++ +I D T T T F E E I G + + + Q D+ + IR
Sbjct: 311 NPKPRYVINLEISDHTTRTTCTIFNEEAERIFGHKSVSTMLEEQNGQIDM-IPDTIRQIC 369
Query: 604 FNQYLFRLKI 613
+FRLK+
Sbjct: 370 GRILIFRLKL 379
>gi|302823631|ref|XP_002993466.1| hypothetical protein SELMODRAFT_431543 [Selaginella moellendorffii]
gi|300138703|gb|EFJ05461.1| hypothetical protein SELMODRAFT_431543 [Selaginella moellendorffii]
Length = 148
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 53/198 (26%)
Query: 383 LTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAH 442
+ LW EG +++E G P++ VK +++D++G DF
Sbjct: 1 MCLWDSEAEDEGSEIKEKPGQGERPIVCVKGSQISDYNGN--------------DF---- 42
Query: 443 ELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITF 502
W++ +SI+ +++ A I + V+V+ F
Sbjct: 43 ----WYNE------MLSINLKVSEFSA---IFHVI----------------VSVKEF--- 70
Query: 503 IKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGL 561
++ F Y AC ++ RQC KKVTQ S + WQC+ C+ + + ++Y L I D TG
Sbjct: 71 -QTGDFYYPACMKVVNGRQCGKKVTQVSESMWQCNSCDTDFGDIHFKYALHLCILDSTGH 129
Query: 562 TWVTAFQESGEEILGCPA 579
W AF ++ EI+ PA
Sbjct: 130 IWAVAFDDA-NEIVEMPA 146
>gi|77551838|gb|ABA94635.1| hypothetical protein LOC_Os11g38310 [Oryza sativa Japonica Group]
Length = 764
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 173/430 (40%), Gaps = 72/430 (16%)
Query: 204 APARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFD-----LLDSDGGEI 258
AP+ +I AL P RW IK +V R +A V F +LD++G I
Sbjct: 2 APSNLI--TALTPKNDRWRIKVKVI------RLWDAVNPTMVDEFYGIQMIVLDAEGNSI 53
Query: 259 RVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEED 318
V+ + + F I++ +Y + K + LKN +I
Sbjct: 54 HVSISKQLANHFRPKIKINSIYTFKNFKVMEHDK-YRVLKNNLKILFYH----------- 101
Query: 319 DSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNP-SVPILRKNGMETQRRILNLKDTS 377
D+I K+ + +DVIG++ + P +L KN ++ R+ N+++
Sbjct: 102 DTIVKETCLY--------------LDVIGLLSGMKPIEQRMLGKNT--SRERVCNMREIE 145
Query: 378 GR-----SVELTLWGDFCNKEGQKLQEMVD---VGFFPVLSVKSGKVNDFSGK-SIGTIP 428
V++TLWGD L MVD +G V V ++ S G
Sbjct: 146 LLLLEGEKVKITLWGDI-------LANMVDDDLLGKQTVFIATGLLVKEYEKLLSFGVTS 198
Query: 429 STQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEI----HKTVSQIKNEG 484
ST++F++ + + E+ ++ + I + + G E KT+ +I
Sbjct: 199 STEVFLDMEIPASMEILSRHNA--EKVLPTMIEVDASTQGTIEEQMFYNRKTLKEITELR 256
Query: 485 LGRSEKPDWV-TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEID 543
++ +++ TV+A I IKS ++ Y +C +C + N + C+ C +E
Sbjct: 257 YSNIQQKEFICTVKAKIEEIKSRNWWYMSCD------KCFCGTRKESNVYICNSCGKEAV 310
Query: 544 ECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRV 603
RY++ +I D T T T F E E I G + + + Q D+ + IR
Sbjct: 311 NPKPRYVINLEISDHTTRTTCTIFNEEAERIFGHKSVSTMLEEQNGQIDM-IPDTIRQIC 369
Query: 604 FNQYLFRLKI 613
+FRLK+
Sbjct: 370 GRILIFRLKL 379
>gi|77552149|gb|ABA94946.1| hypothetical protein LOC_Os11g41180 [Oryza sativa Japonica Group]
Length = 800
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 172/427 (40%), Gaps = 66/427 (15%)
Query: 204 APARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVT 261
AP+ +I AL P RW IK +V D N + + + LD++G I V+
Sbjct: 2 APSNLI--TALTPKNDRWRIKVKVIRLWDAV---NPTMVDEFYGIHMIVLDAEGNSIHVS 56
Query: 262 CFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSI 321
+ + F I++ +Y + K + LKN +I D+I
Sbjct: 57 ISKQLANHFRPKIKINSIYTFKNFKVMEHDK-YRVLKNNLKILFYH-----------DTI 104
Query: 322 PKQQFSFRHISEIESAENNSIVDVIGIVISVNP-SVPILRKNGMETQRRILNLKDTSGR- 379
K+ + +DVIG++ + P +L KN ++ R+ N+++
Sbjct: 105 VKETCLY--------------LDVIGLLSGMKPIEQRMLGKNT--SRERVCNMREIELLL 148
Query: 380 ----SVELTLWGDFCNKEGQKLQEMVD---VGFFPVLSVKSGKVNDFSGK-SIGTIPSTQ 431
V++TLWGD L MVD +G V V ++ S G ST+
Sbjct: 149 LEGEKVKITLWGDI-------LANMVDDDLLGKQTVFIATGLLVKEYEKLLSFGVTSSTE 201
Query: 432 LFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEI----HKTVSQIKNEGLGR 487
+F++ + + E+ ++ + I + + G E KT+ +I
Sbjct: 202 VFLDMEIPASMEILSRHNA--EKVLPTMIEVDASTQGTIEEQMFYNRKTLKEITELRYSN 259
Query: 488 SEKPDWV-TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECD 546
++ +++ TV+A I IKS ++ Y +C +C + N + C+ C +E
Sbjct: 260 IQQKEFICTVKAKIEEIKSRNWWYMSCD------KCFCGTRKESNVYICNSCGKEAVNPK 313
Query: 547 YRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQ 606
RY++ +I D T T T F E E I G + + + Q D+ + IR
Sbjct: 314 PRYVINLEISDHTTRTTCTIFNEEAERIFGHKSVSTMLEEQNGQIDM-IPDTIRQICGRI 372
Query: 607 YLFRLKI 613
+FRLK+
Sbjct: 373 LIFRLKL 379
>gi|357498253|ref|XP_003619415.1| Coiled-coil domain-containing protein [Medicago truncatula]
gi|355494430|gb|AES75633.1| Coiled-coil domain-containing protein [Medicago truncatula]
Length = 705
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 110/217 (50%), Gaps = 14/217 (6%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
L+D +G +I T ++ F + G+VY +S ++ + + +++ + +
Sbjct: 42 LIDQNGVKIHATIPKQLMYLFQHKLIEGKVYKLSNFTVLLNSGAYRTTHHTYKLIFQMKT 101
Query: 310 TVDLCTEEDDS-IPKQQFSFRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMET 366
V+ + + S IP + IS+I S + +VDVIG++ ++ +R +G T
Sbjct: 102 KVEESHDYEISLIPNHGLTLTDISQITSRTQDYEYLVDVIGLMTGISAEREFVR-DGKLT 160
Query: 367 QRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGK-SIG 425
+ ++ L D SG+ E TL+G++ ++ + + + V+ PV+ ++ KV F GK SI
Sbjct: 161 KILVIELTDHSGK-CECTLFGNYVDELHKLMSKAVEGS--PVIVIQFAKVKIFRGKASIQ 217
Query: 426 TI--PSTQLFINPDFAEAHELRE----WFDSGGKNAA 456
+ +T++++NP F EA + +E WF +N A
Sbjct: 218 NVVGSTTRIYLNPSFPEALKFKEGKEVWFTFSKQNEA 254
>gi|297724261|ref|NP_001174494.1| Os05g0523100 [Oryza sativa Japonica Group]
gi|255676500|dbj|BAH93222.1| Os05g0523100 [Oryza sativa Japonica Group]
Length = 1068
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 106/467 (22%), Positives = 186/467 (39%), Gaps = 75/467 (16%)
Query: 170 PNAGSIVRSFQPTVQPPYQPPPNFRN-HGPIL--KNEAPARIIPIAALNPYQGRWAIKAR 226
P+ G R ++ ++P + P+L N AP+ +I L P RW IK +
Sbjct: 213 PSPGKFARGYREHEDDFWRPCNGSQQLRYPVLVRDNMAPSNLI--TELTPKNDRWRIKVK 270
Query: 227 VTAKGDLRRYNNARGDGKVFSFD-----LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYL 281
V R +A V F +LD++G I V+ + + F I++ +Y
Sbjct: 271 VI------RLWDAVNPTMVDEFYGIQMIVLDAEGNSIHVSISKQLANHFRPKIKINSIYT 324
Query: 282 ISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNS 341
+ K + LKN +I D+I K+ +
Sbjct: 325 FKNFKVMEHDK-YRVLKNNLKILFYH-----------DTIVKETCLY------------- 359
Query: 342 IVDVIGIVISVNP-SVPILRKNGMETQRRILNLKDTSGR-----SVELTLWGDFCNKEGQ 395
+DVIG++ + P +L KN ++ R+ N+++ V++TLWGD
Sbjct: 360 -LDVIGLLSGMKPIEQRMLGKNT--SRERVCNMREIELLLLEGEKVKITLWGDI------ 410
Query: 396 KLQEMVD---VGFFPVLSVKSGKVNDFSGK-SIGTIPSTQLFINPDFAEAHELREWFDSG 451
L MVD +G V V ++ S G ST++F++ + + E+ ++
Sbjct: 411 -LANMVDDDLLGKQTVFIATGLLVKEYEKLLSFGVTSSTEVFLDMEIPASMEILSRHNA- 468
Query: 452 GKNAATVSISREIAAGGAKNEI----HKTVSQIKNEGLGRSEKPDWV-TVRAFITFIKSD 506
+ I + + G E KT+ +I ++ +++ TV+A I IKS
Sbjct: 469 -EKVLPTMIEVDASTQGTIEEQMFYNRKTLKEITELRYSNIQQKEFICTVKAKIEEIKSR 527
Query: 507 SFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTA 566
++ Y +C +C + N + C+ C +E RY++ +I D T T T
Sbjct: 528 NWWYMSCD------KCFCGTRKESNVYICNSCGKEAVNPKPRYVINLEISDHTTRTTCTI 581
Query: 567 FQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKI 613
F E E I G + + + Q D+ + IR +FRLK+
Sbjct: 582 FNEEAERIFGHKSVSTMLEEQNGQIDM-IPDTIRQICGRILIFRLKL 627
>gi|357517787|ref|XP_003629182.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355523204|gb|AET03658.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
Length = 604
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/429 (19%), Positives = 169/429 (39%), Gaps = 50/429 (11%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I P++A+ + ++ RV + +N + D + LLD G+I++T ++
Sbjct: 5 ITPVSAIVAGRINIRLRVRVVHVWTIPEFNRPQEDSAMHLL-LLDEKFGKIQLTVKKHLI 63
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI-FLEATSTVDLCTEEDDSIPKQQF 326
++E G Y++ + + ++W + FL T + E +IP+ F
Sbjct: 64 PMIKSVVEEGAAYMLDNVLVTRNDPKYGTTNHKWRLDFLHKTKFNKI---EALNIPQNHF 120
Query: 327 SFRHISEI-ESAENNSIVDVIGIVISVNPSVPILRK---NGMETQRRILNLKDTSGRSVE 382
F +EI +S I+DVIG V+ + +++ NG ++ L L+D+ R +
Sbjct: 121 DFVSFAEILDSDREERIIDVIGHVVERD----VMKDKEVNGRTSKLLDLTLQDSESRRIH 176
Query: 383 LTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPST----------QL 432
+LW + + FF S + + + ST +L
Sbjct: 177 CSLWATYAERM---------TSFFATHEANSPVIVIMQQCKLKSYCSTMGVSNAFYGIKL 227
Query: 433 FINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAK------NEIHKTVSQIKNEGLG 486
++ D AE E + N V +++ I+ A +++ ++ + L
Sbjct: 228 IVDGDIAEVSEYKSKI-----NGEEVQVTQGISQSSASSIVPLVDDMLQSHRMTIEDLLD 282
Query: 487 RSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECD 546
SEK + + + K ++ Y AC +C +V R C +CN +
Sbjct: 283 ASEKCNGIVLATVCDIEKEFNWYYQACT------KCAGRVKTIAGRLFCPKCNTGRNAVP 336
Query: 547 YRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQ 606
R+ + Q+ D TG T F + +G ++L + + ++ F + Q
Sbjct: 337 -RFKVHLQVMDNTGSTSFILFDRNVSNYVGKSVQDLIQQQAQQKNADDFPAEFDTFYGKQ 395
Query: 607 YLFRLKIKE 615
LF++++ E
Sbjct: 396 MLFKVEVAE 404
>gi|440292825|gb|ELP86002.1| hypothetical protein EIN_234190 [Entamoeba invadens IP1]
Length = 344
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 11/183 (6%)
Query: 207 RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV 266
+I P A + IK RV +K ++ R G F L D++ E+ V C++
Sbjct: 139 KITPFAVITTMTNNVTIKGRVISKSNITR----TVTGTKLCFLLQDANENEMTVNCYDNE 194
Query: 267 VDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEE-DDSIPKQQ 325
++ +++ +VG VY I K + + HL+ E EI + T T ++ T+E ++ IP +
Sbjct: 195 CEQAFDMFQVGSVYFIYCRQFKEIKSSI-HLR-EKEIDVNMTYTCEIPTQESENDIPSKG 252
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
IS +++A + DV G+VI +N + + G + R IL + D S +E+
Sbjct: 253 L-ITTISYLKNATVEKLYDVSGVVIKINKEDNVTK--GGKVYRTIL-VVDQSNYIIEIKF 308
Query: 386 WGD 388
WGD
Sbjct: 309 WGD 311
>gi|302776414|ref|XP_002971372.1| hypothetical protein SELMODRAFT_412040 [Selaginella moellendorffii]
gi|300161354|gb|EFJ27970.1| hypothetical protein SELMODRAFT_412040 [Selaginella moellendorffii]
Length = 132
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 475 KTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRW 533
KTVS++ + L SE V + ++ F Y AC ++ RQC KKVTQ S + W
Sbjct: 26 KTVSEMLSINLKVSEFSAIFRVIVLVKEFQTGDFYYPACMKVVNGRQCAKKVTQVSESMW 85
Query: 534 QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPA 579
QC+ C+ + + +Y L I D TG W AF ++ EI+ PA
Sbjct: 86 QCNSCDTDSGDIHLKYALHLCILDSTGHIWAVAFDDA-NEIVEMPA 130
>gi|302825407|ref|XP_002994322.1| hypothetical protein SELMODRAFT_432246 [Selaginella moellendorffii]
gi|300137797|gb|EFJ04619.1| hypothetical protein SELMODRAFT_432246 [Selaginella moellendorffii]
Length = 105
Score = 63.9 bits (154), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 494 VTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYRYLLQ 552
++V+ F ++ F Y AC ++ RQC KKVTQ S + WQC+ C+ + + ++Y LQ
Sbjct: 22 ISVKEF----QTGDFYYPACMKVVNGRQCGKKVTQVSESMWQCNSCDTDSGDIHFKYALQ 77
Query: 553 AQIQDQTGLTWVTAFQESGEEILGCPA 579
I D TG W AF ++ EI+ PA
Sbjct: 78 LCILDSTGHIWAVAFDDT-NEIVEMPA 103
>gi|391344163|ref|XP_003746372.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Metaseiulus occidentalis]
Length = 198
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 6/192 (3%)
Query: 229 AKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLK 288
K D++ + DG +FSF L D + +I V + +E I+ G Y I +
Sbjct: 2 TKSDMKTFKKDNTDGNLFSFTLAD-NTADINVLVTGELGHEMFEKIQTGHCYQICDFKQR 60
Query: 289 PAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGI 348
P+ + + E+ L S V + D +PK+ + I++I E ++D+ I
Sbjct: 61 PSHPLYKVTNHTCELLLGKISEVRQI--DGDHLPKKVEKYFTINQIRDTEVGKMIDLQAI 118
Query: 349 VISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPV 408
+ V K G R+ + L D S + V LTLWG +K + ++VD F
Sbjct: 119 IYDVGEIHSYSGKAGDIRNRQNILLVDDSRKIVSLTLWGSLIHKVDDREGQVVD---FQK 175
Query: 409 LSVKSGKVNDFS 420
LSVKS K+ S
Sbjct: 176 LSVKSSKLGRIS 187
>gi|449688707|ref|XP_004211822.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Hydra magnipapillata]
Length = 99
Score = 63.9 bits (154), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 553 AQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLK 612
A I D +G W+TAFQES E IL A+++ LK D +F I F ++F+++
Sbjct: 1 ANIADFSGNQWITAFQESAEAILCVSAEQIGHLKD--SDVSQFDMIFSEACFKPFVFKVR 58
Query: 613 IKEELYGDEQRVKITVIRADQVNYSSESRYLLDLI 647
K E Y DE+++K + + A VN+ E + LLD I
Sbjct: 59 AKMETYQDERKLKCSAMSAAPVNFKQECKRLLDEI 93
>gi|297852032|ref|XP_002893897.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339739|gb|EFH70156.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 492
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 158/394 (40%), Gaps = 47/394 (11%)
Query: 214 LNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEI 273
LNP + W ++ +V RR N+ G+ F L D +G I T + + +F +
Sbjct: 13 LNPSKYEWVVETKVLCSW-TRRLENS---GRRLVFVLADREGSRIHATVEDKNIKKFDSV 68
Query: 274 IEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQF-SFRHIS 332
++ G V ++ L ++ ++I T+ V C + +P++ F F +
Sbjct: 69 LKEGDVVTLNPFKLIKYSGDYKSNSLSFKILFYRTTQVKPCDDFPKEVPEKYFVEFGDVL 128
Query: 333 EIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNK 392
S + VDVIG +++V P + ++ G T + + L+D + TL DF K
Sbjct: 129 N-GSRDTRVFVDVIGQIVNVGP-IEDIKIRGKSTPKLDVELRDRGNVRLICTLLADFA-K 185
Query: 393 EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI--GTIPSTQLFINPDFAEAHELREWFDS 450
+ + E V ++ +V ++ G + +T++ ++P E R +
Sbjct: 186 QVKVYTEANPAAV--VCVIRCAQVKEWKGNWTISNAMGATRVLLDPPGVFVDEFRSGLPT 243
Query: 451 GGK-----------NAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAF 499
G +TVSI + K + V ++ EG+ VT+
Sbjct: 244 DGVVLTNHDNSELFAGSTVSIRDQFLVKNHKRTVRDIVEALE-EGMC-------VTMVTV 295
Query: 500 ITFIKSDSFCYTACPLMIGDRQCNKKVT----QSGNR-----WQCDRCNQEIDECDYRYL 550
+ ++ + Y +C + CNK V SG+ + C C++++ +RY
Sbjct: 296 GSVERTSKWYYVSC------KMCNKSVEPYPENSGDDGNPPLYYCGICDKDVSAVVFRYR 349
Query: 551 LQAQIQDQTGL-TWVTAFQESGEEILGCPAKELY 583
L ++ D T F G +L A+ELY
Sbjct: 350 LVLEVSDATNYKARFLLFDAMGSTLLRRTAQELY 383
>gi|84490268|ref|YP_448500.1| replication factor A [Methanosphaera stadtmanae DSM 3091]
gi|84373587|gb|ABC57857.1| predicted ssDNA-binding protein [Methanosphaera stadtmanae DSM
3091]
Length = 793
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 176/406 (43%), Gaps = 83/406 (20%)
Query: 206 ARIIPIAALNPYQGRWA-IKARVTAKGDLRRYNNARGDG---KVFSFDLLDSDGGEIRVT 261
+I + LN +GR + R+ D R + RGDG ++ S +L D + G +R +
Sbjct: 410 VKIENVLDLNEDEGREVDVVGRIITTNDTREF--ERGDGSKGQIKSIELAD-ETGIVRTS 466
Query: 262 CFNAVVDRFYEIIE-VGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEED-- 318
++ VD I E +G I + Q + E+ + +S + T+E+
Sbjct: 467 LWDEKVD----ITEKLGDAIKIENARTRIGQ-------GQMELSVGKSSRITTPTDEEIV 515
Query: 319 -----DSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNL 373
++I + +++ R IS++E E N+ + V ++++N R +G + + R + +
Sbjct: 516 NLPSYENIEQDRYNDRTISQLEENETNTKLRVR--ILNINEINTFTRTDGRDGRVRSIYV 573
Query: 374 KDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF 433
D +G ++++LW D ++ F T S +
Sbjct: 574 ADETG-EIQVSLWDDDT-----------EIKF--------------------TKGSAIII 601
Query: 434 INPDFAEAH-ELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGR----- 487
NP+ + +LR G N +T+ +R+ A E ++++I+N+
Sbjct: 602 ENPNITRQNTKLR--LSIG--NGSTIRAARQEEA-----EKMLSLTEIENKLYVEKYIED 652
Query: 488 -SEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECD 546
E + ++ I+ I S+ YT CP CN +TQ N + C+ C ++I++ +
Sbjct: 653 IEEDDQHIKIKGTISEINSEKIIYTMCP------NCNIGITQDENGYICNECGEKIEKPN 706
Query: 547 YRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDD 592
Y ++ +QD+TG T F++ EE++ +++ + YE D
Sbjct: 707 YLMIISTTLQDETGTVQATFFRKDAEELISTTTEKVVAI-YEQTGD 751
>gi|4895168|gb|AAD32756.1| putative replication protein A1 [Arabidopsis thaliana]
Length = 458
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 139/360 (38%), Gaps = 41/360 (11%)
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE 302
G+ F L D G +I + ++RF +I G I L A F + ++
Sbjct: 4 GETFDMVLSDVRGKKIHASVKREHLNRFERLIVPGEWRAIENFGLTYATGQFKATDHRYK 63
Query: 303 IFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN 362
+ A + V DS +F + N ++DV+G +++V + + +
Sbjct: 64 MGFMAQTRVVRIDPLSDSYFLSLTAFNDVLN-GGLNQNYLIDVVGQIVNVG-EMETIDVH 121
Query: 363 GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG- 421
T++ L+D + TLWG F + + G + V+ K+ +
Sbjct: 122 NQPTKKIDFELRDQKDERLPCTLWGSFAEQVFTACEAAN--GEMIICLVRFAKLKTYKDV 179
Query: 422 KSIG-TIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISR--------EIAAGGAKNE 472
+SI ++Q+ INPD E E + D+ K+ +++ E G +
Sbjct: 180 RSISNAFNTSQILINPDLPEILEFK---DALPKDCLALTLIESKPKSKIDEFPTGDFYLQ 236
Query: 473 I-HKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSD---SFCYTACPLMIGDRQCNKKVTQ 528
KT+ ++ SE D V+ T D S+ Y C ++CNKKVT+
Sbjct: 237 FAKKTIKEV-------SEMFDVGRVKVLCTIYDIDRDWSWYYIVC------KKCNKKVTK 283
Query: 529 ------SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL 582
W C+ C I RY L ++ D +G + F EI+GCPA L
Sbjct: 284 VVMTSLKAQLW-CETCRAPITNVLARYKLHVKVMDSSGEMKLMLFDAMSSEIVGCPANNL 342
>gi|77555321|gb|ABA98117.1| hypothetical protein LOC_Os12g26850 [Oryza sativa Japonica Group]
Length = 1201
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 106/242 (43%), Gaps = 28/242 (11%)
Query: 223 IKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
IKARV+ D N+ D K+ DL LD G I + V+ +++ G+VY
Sbjct: 703 IKARVSRLWDFHDLND---DRKIVHTDLVLLDETGNSIHAQMYQHVIVNLKPLLQEGKVY 759
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENN 340
I +++ A + + + + I +T++ C + P FS ++ S +
Sbjct: 760 YIDSFTVRYANRTYRPVAHSQMILFTKWTTLEECVDVPADFPAITFSLTPFGDVPSLVDK 819
Query: 341 SI--VDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTLWGD--------- 388
+I VD++G++ + + + + ++ +R L + D S ++ LTLWG+
Sbjct: 820 NIFYVDIMGVITEIGTTSTVRPQSRNTDSLKRTLQICDASNSTLPLTLWGERATAFDAEN 879
Query: 389 FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPST--QLFINPDFAEAHELRE 446
N ++ Q +V VG V ++ G + S+ + +IN + E EL+E
Sbjct: 880 IYNAGQRQPQVVVFVGTL---------VKNYKGLGLTLTGSSPCKWYINLEIPEVVELKE 930
Query: 447 WF 448
+
Sbjct: 931 RY 932
>gi|356541339|ref|XP_003539135.1| PREDICTED: uncharacterized protein LOC100796376 [Glycine max]
Length = 452
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 240 RGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYL 281
+G KVFSFD++DSDGG+I TCFN V D+FY +IE G+V L
Sbjct: 297 KGYKKVFSFDVVDSDGGQIGATCFNVVADQFYNVIEAGKVSL 338
>gi|222628302|gb|EEE60434.1| hypothetical protein OsJ_13642 [Oryza sativa Japonica Group]
Length = 479
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 116/276 (42%), Gaps = 27/276 (9%)
Query: 221 WAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNAVVDRFYEIIEVGR 278
W I+AR+ D Y D DL+ D G + D+F +++ +
Sbjct: 16 WKIRARIARMWD---YTGTANDVPPMHVDLVLVDEKGNAMYAEIPGVEADKFRPLLQESK 72
Query: 279 VYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIES-- 336
VY SK + P++ + N++ I L + V+ E P F+ S++
Sbjct: 73 VYTFSKFLVLPSKPAYKPFPNKYMIKLTPWTNVEQVNEVPADFPSHVFNLVQFSDLSQRV 132
Query: 337 AENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELTLWG----DFCN 391
DVIG++I V+ + + +T +R++ L+D + V+L LWG DF
Sbjct: 133 GMQEYFTDVIGMIIGVSKLAYVRMASKTSDTPKRVIALRDLANCEVKLVLWGEHALDFDA 192
Query: 392 KEGQKL-QEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDS 450
+ Q+ V VG F G + K++ + + ++N D E+ ++FDS
Sbjct: 193 DAVHSVGQDNVVVGIF------VGTLMKAYNKTLSGGSACKWYLNEDIP---EINQFFDS 243
Query: 451 GGKNAATVS-ISREIAAGGAKNEI----HKTVSQIK 481
G +A + IS + G+ HK+V+ +K
Sbjct: 244 LGDSAPKIQWISAGAKSFGSSQRPAQLEHKSVADLK 279
>gi|297613121|ref|NP_001066722.2| Os12g0454300 [Oryza sativa Japonica Group]
gi|255670281|dbj|BAF29741.2| Os12g0454300 [Oryza sativa Japonica Group]
Length = 1051
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 106/242 (43%), Gaps = 28/242 (11%)
Query: 223 IKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
IKARV+ D N+ D K+ DL LD G I + V+ +++ G+VY
Sbjct: 553 IKARVSRLWDFHDLND---DRKIVHTDLVLLDETGNSIHAQMYQHVIVNLKPLLQEGKVY 609
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENN 340
I +++ A + + + + I +T++ C + P FS ++ S +
Sbjct: 610 YIDSFTVRYANRTYRPVAHSQMILFTKWTTLEECVDVPADFPAITFSLTPFGDVPSLVDK 669
Query: 341 SI--VDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTLWGD--------- 388
+I VD++G++ + + + + ++ +R L + D S ++ LTLWG+
Sbjct: 670 NIFYVDIMGVITEIGTTSTVRPQSRNTDSLKRTLQICDASNSTLPLTLWGERATAFDAEN 729
Query: 389 FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPST--QLFINPDFAEAHELRE 446
N ++ Q +V VG V ++ G + S+ + +IN + E EL+E
Sbjct: 730 IYNAGQRQPQVVVFVGTL---------VKNYKGLGLTLTGSSPCKWYINLEIPEVVELKE 780
Query: 447 WF 448
+
Sbjct: 781 RY 782
>gi|391338168|ref|XP_003743433.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Metaseiulus occidentalis]
Length = 301
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 115/248 (46%), Gaps = 15/248 (6%)
Query: 204 APARII-PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDG-GEIRVT 261
+PA+ + + L P + + R+ +KG +R + G++FSF + SDG +I+
Sbjct: 50 SPAKKVKSLGDLTPGKIGGIVNGRIESKGTIRTWKKDNEQGQLFSFVM--SDGSADIQAV 107
Query: 262 CFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSI 321
+ +++ I VG+ Y I+ +K +N + E+ L T + + I
Sbjct: 108 VSGDMCTEYHDRITVGQCYQITAFKVKETNPAYNPTNHPCELHL--TKISKMVPIQGSHI 165
Query: 322 PKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSV 381
PK S ++EI + N +V+V IV V I ++G+ ++ + L D + + +
Sbjct: 166 PKSIVSRTTLAEIAKQDANKVVNVEAIVYEVGKPQSISCRDGITRMKQSVLLVDETLKII 225
Query: 382 ELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS-IGTIPSTQLFINPDFAE 440
L LW + +QE+ + VL V++ +V +++GK + ++ T + P
Sbjct: 226 SLGLW-------AEAVQELDGMESNCVL-VRNLQVKEYAGKKQLNSMSGTVVDKEPASET 277
Query: 441 AHELREWF 448
A +R W+
Sbjct: 278 AKSMRLWW 285
>gi|195330774|ref|XP_002032078.1| GM26361 [Drosophila sechellia]
gi|194121021|gb|EDW43064.1| GM26361 [Drosophila sechellia]
Length = 228
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 19/231 (8%)
Query: 222 AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYL 281
+IKARV K ++ ++ + G V+ LLD + GEI F + FY I+ G VYL
Sbjct: 13 SIKARVIWKSEITQWRKGQKCGIVYIMHLLD-ESGEITGIVFADYDNGFYGQIQPGLVYL 71
Query: 282 ISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNS 341
IS ++ A ++ N +++F ++L IP+++++F + ++ S +
Sbjct: 72 ISGFDVEEAISDYKVSDNPYQLFFRHNIVLELSA--CGRIPREKYNFLPLVKVSSKADKD 129
Query: 342 IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLW-GDFCNKEGQKLQEM 400
VD IGI +V L + R IL L D V L LW + N GQ
Sbjct: 130 PVDAIGICTAVGR----LEERRGFFIREIL-LVDPFYHPVMLNLWQKEAVNFVGQPND-- 182
Query: 401 VDVGFFPVLSVKSGKVNDFSGK-SIGTIPSTQLFINPDFAEAHELREWFDS 450
V+ VK + + K + T + INPD +A L W+++
Sbjct: 183 -------VIVVKGARAQPHNNKMKLNASWYTNVQINPDIPDATALLAWYNN 226
>gi|3695387|gb|AAC62789.1| contains similarity to replication protein A1 [Arabidopsis
thaliana]
gi|10177641|dbj|BAB10788.1| replication protein A1-like [Arabidopsis thaliana]
Length = 1073
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 159/410 (38%), Gaps = 53/410 (12%)
Query: 258 IRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEE 317
+ T +V +F + VG I L A F + +++ + + V C
Sbjct: 1 MHATVKKELVSKFVHKLIVGEWVFIEIFRLTYASSQFRPTNHLYKMAFQVRTEVMGCASV 60
Query: 318 DDSIPKQQFSFRHISEIESAENN--SIVDVIGIVISVNPSVPILRKNGMETQRRILNLKD 375
DS + S+I+S E N +VD IG +I+V + L N T + ++D
Sbjct: 61 SDS---NFLTLAPFSKIQSGELNPHMLVDAIGQIITVG-ELEELEANNKPTTKIDFEIRD 116
Query: 376 TSGRSVELTLWGDFCNKEGQKLQE------------------------MVDVGFFPVLS- 410
+++TLWG + + + QE V + F +L
Sbjct: 117 QMDERMQVTLWGTYAQQVYRACQESEGKNVIFLIRFAKIKSYKGIFSFFVPIPFLSILHD 176
Query: 411 VKSGKVNDFSG-KSIG-TIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGG 468
+ S K + +G KS+ + ++Q+ +NPDF EAH + + G +
Sbjct: 177 LWSLKCYETAGVKSLSNSFDASQVHVNPDFPEAHHFSQTLPNDGAICVYRTRVPRFEMVA 236
Query: 469 AKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKKVT 527
K + ++ E L S + V V I I +D ++ Y +C + CNKKV
Sbjct: 237 VKRIDYSVYTRNTIEDLLSSTEVGKVRVLCTIYAIDTDWAWYYISC------KTCNKKVN 290
Query: 528 Q------------SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEIL 575
++ CD C + RY++ A++ D T + F EI+
Sbjct: 291 HIHAGVNGVNNKGKKPKFWCDTCKSVVTNVVSRYMIYAKVMDSTSEAKLVLFDSICFEII 350
Query: 576 GCPAKELYMLKY-ELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRV 624
G A + E++D + +++ + +LF + ++++ D + +
Sbjct: 351 GESATSVLNGSVNEIEDPEDLPDSVKNLIGKTFLFLVWVEKDNISDGKEI 400
>gi|402223354|gb|EJU03419.1| hypothetical protein DACRYDRAFT_106579 [Dacryopinax sp. DJM-731
SS1]
Length = 326
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 107/257 (41%), Gaps = 31/257 (12%)
Query: 375 DTSGRSVELTLWGD----FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPST 430
D G V +T+W F K GQ VL V + V G ++ + T
Sbjct: 31 DKEGHVVRVTMWNSRAKIFSGKHGQ------------VLHVMNSVVEHRGGVTLNSSEKT 78
Query: 431 QLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKN-----EIHK--TVSQIKNE 483
+ +NP EA EL++WF G AA IS + G E+ K T +Q++
Sbjct: 79 EFPLNPKIEEADELKQWFTDGFDEAALKHISCGYSKEGGLTSTTLEELPKVLTKAQVRAS 138
Query: 484 GLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEID 543
LG + D+ + I+ + + Y +C G + C + + + + D
Sbjct: 139 RLGHGDCIDYFNMVENISGFQ-EGIMYQSC----GFQGCRESLEKHKGDCPVKEHTPQPD 193
Query: 544 ECDYRYLLQAQI-QDQTGLTWVTAFQESGEEILGCPAKELYMLKY--ELQDDVRFGEIIR 600
E Y+Y + +D+ + +T F +G I+G PA E+Y ++ Q + EII
Sbjct: 194 EKQYKYKIGFTTGEDENKVMLLTVFSPAGTMIIGAPATEMYKMEATPNTQYMKKLEEIIT 253
Query: 601 SRVFNQYLFRLKIKEEL 617
S F++ L R+ + +
Sbjct: 254 SGTFHKLLVRVSTRHWM 270
>gi|297795577|ref|XP_002865673.1| hypothetical protein ARALYDRAFT_917801 [Arabidopsis lyrata subsp.
lyrata]
gi|297311508|gb|EFH41932.1| hypothetical protein ARALYDRAFT_917801 [Arabidopsis lyrata subsp.
lyrata]
Length = 496
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 170/428 (39%), Gaps = 50/428 (11%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGD-GKVFSFDLLDSDGGEIRVTCFNAVVDR 269
I +NP + IK + LR + + D G L+D G I T + + +
Sbjct: 14 IDDINPIHDQNKIKVLI-----LRLWKAYQRDAGNTIEMVLVDEKGSRIHATVEDKNIKK 68
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQF-SF 328
F +++ G V ++ L ++ ++I T+ V C + +P++ F F
Sbjct: 69 FDSVLKEGDVVTLNPFKLIKYSGDYKSNSLSFKILFYRTTQVKPCDDFPKEVPEKYFVEF 128
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD 388
+ S + VDVIG +++V P + ++ G T + + L+D + TLW D
Sbjct: 129 GDVLN-GSRDTRVFVDVIGQIVNVGP-IEDIKIRGKSTPKLDIELRDRGNVRLICTLWAD 186
Query: 389 FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI--GTIPSTQLFINPDFAEAHELRE 446
F K+ + E V ++ +V ++ G + +T++ ++P E R
Sbjct: 187 FA-KQVKVYTEANPAAV--VCVIRCAQVKEWKGNWTISNAMGATRVLLDPPGVFVDEFRS 243
Query: 447 WFDSGGK-----------NAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVT 495
+ G +TVSI + K + V ++ EG+ VT
Sbjct: 244 GLPTDGVVLTNHDNSELFAGSTVSIRDQFLVKNHKRTVRDIVEALE-EGM-------CVT 295
Query: 496 VRAFITFIKSDSFCYTACPLMIGDRQCNKKV----TQSGNR-----WQCDRCNQEIDECD 546
+ + ++ + Y +C + CNK V SG+ + C C++++
Sbjct: 296 MVTVGSVERTSKWYYVSC------KMCNKSVEPYPENSGDDGKPPLYYCGVCDKDVSAVV 349
Query: 547 YRYLLQAQIQDQTGL-TWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFN 605
+RY L ++ D T F G +L A+ELY E + E I + V
Sbjct: 350 FRYRLVLEVSDATNYKARFLLFDAMGSTLLRRTAQELYNAVSENDPSILPSE-IGALVGR 408
Query: 606 QYLFRLKI 613
++LF++ I
Sbjct: 409 RFLFKVSI 416
>gi|55168169|gb|AAV44036.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 820
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 172/430 (40%), Gaps = 72/430 (16%)
Query: 204 APARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFD-----LLDSDGGEI 258
AP+ +I L P RW IK +V R +A V F +LD++G I
Sbjct: 2 APSNLI--TELTPKNDRWRIKVKVI------RLWDAVNPTMVDEFYGIQMIVLDAEGNSI 53
Query: 259 RVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEED 318
V+ + + F I++ +Y + K + LKN +I
Sbjct: 54 HVSISKQLANHFRPKIKINSIYTFKNFKVMEHDK-YRVLKNNLKILFYH----------- 101
Query: 319 DSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNP-SVPILRKNGMETQRRILNLKDTS 377
D+I K+ + +DVIG++ + P +L KN ++ R+ N+++
Sbjct: 102 DTIVKETCLY--------------LDVIGLLSGMKPIEQRMLGKNT--SRERVCNMREIE 145
Query: 378 GR-----SVELTLWGDFCNKEGQKLQEMVD---VGFFPVLSVKSGKVNDFSGK-SIGTIP 428
V++TLWGD L MVD +G V V ++ S G
Sbjct: 146 LLLLEGEKVKITLWGDI-------LANMVDDDLLGKQTVFIATGLLVKEYEKLLSFGVTS 198
Query: 429 STQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEI----HKTVSQIKNEG 484
ST++F++ + + E+ ++ + I + + G E KT+ +I
Sbjct: 199 STEVFLDMEIPASMEILSRHNA--EKVLPTMIEVDASTQGTIEEQMFYNRKTLKEITELR 256
Query: 485 LGRSEKPDWV-TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEID 543
++ +++ TV+A I IKS ++ Y +C +C + N + C+ C +E
Sbjct: 257 YSNIQQKEFICTVKAKIEEIKSRNWWYMSCD------KCFCGTRKESNVYICNSCGKEAV 310
Query: 544 ECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRV 603
RY++ +I D T T T F E E I G + + + Q D+ + IR
Sbjct: 311 NPKPRYVINLEISDHTTRTTCTIFNEEAERIFGHKSVSTMLEEQNGQIDM-IPDTIRQIC 369
Query: 604 FNQYLFRLKI 613
+FRLK+
Sbjct: 370 GRILIFRLKL 379
>gi|297808993|ref|XP_002872380.1| hypothetical protein ARALYDRAFT_911095 [Arabidopsis lyrata subsp.
lyrata]
gi|297318217|gb|EFH48639.1| hypothetical protein ARALYDRAFT_911095 [Arabidopsis lyrata subsp.
lyrata]
Length = 496
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 170/428 (39%), Gaps = 50/428 (11%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGD-GKVFSFDLLDSDGGEIRVTCFNAVVDR 269
I +NP + IK + LR + + D G L+D G I T + + +
Sbjct: 14 IDDINPIHDQNKIKVLI-----LRLWKAYQRDAGNTIEMVLVDEKGSRIHATVEDKNIKK 68
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQF-SF 328
F +++ G V ++ L ++ ++I T+ V C + +P++ F F
Sbjct: 69 FDSVLKEGDVVTLNPFKLIKYSGDYKSNSLSFKILFYRTTQVKPCDDFPKEVPEKYFVEF 128
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD 388
+ S + VDVIG +++V P + ++ G T + + L+D + TLW D
Sbjct: 129 GDVLN-GSRDTRVFVDVIGQIVNVGP-IEDIKIRGKSTPKLDVELRDRGNVRLICTLWAD 186
Query: 389 FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI--GTIPSTQLFINPDFAEAHELRE 446
F K+ + E V ++ +V ++ G + +T++ ++P E R
Sbjct: 187 FA-KQVKVYTEANPAAV--VCVIRCAQVKEWKGNWTISNAMGATRVLLDPPGVFVDEFRS 243
Query: 447 WFDSGGK-----------NAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVT 495
+ G +TVSI + K + V ++ EG+ VT
Sbjct: 244 GLPTDGVVLTNHDNSELFAGSTVSIRDQFLVKNHKRTVRDIVEALE-EGM-------CVT 295
Query: 496 VRAFITFIKSDSFCYTACPLMIGDRQCNKKVT----QSGNR-----WQCDRCNQEIDECD 546
+ + ++ + Y +C + CNK V SG+ + C C++++
Sbjct: 296 MVTVGSVERTSKWYYVSC------KMCNKSVEPYPENSGDDGNPPLYYCGICDKDVSAVV 349
Query: 547 YRYLLQAQIQDQTGL-TWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFN 605
+RY L ++ D T F G +L A+ELY E + E I + V
Sbjct: 350 FRYRLVLEVSDATNYKARFLLFDAMGSTLLRRTAQELYNAVSENDPSILPSE-IGALVGR 408
Query: 606 QYLFRLKI 613
++LF++ I
Sbjct: 409 RFLFKVSI 416
>gi|391326557|ref|XP_003737779.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Metaseiulus occidentalis]
Length = 131
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 524 KKVTQSGN-RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL 582
KKV G+ + C++C +R +L+ + D T W TAF E E+ILG A L
Sbjct: 2 KKVHDQGDGTFSCEKCASSGPNYKWRLILKMAVADPTKQLWCTAFNEKAEQILGVTAATL 61
Query: 583 YMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKITVIRADQVNYSSESRY 642
Y + I + +F Q+ F+ + + E++ DE+R + V+ ++ S +S++
Sbjct: 62 G--DYSENNPDEMDRIFSASMFKQFHFKFRGRMEVFQDERRFQTAVVEVKEIKPSEDSQH 119
Query: 643 LLDLIS 648
L+ IS
Sbjct: 120 LVKDIS 125
>gi|297837861|ref|XP_002886812.1| hypothetical protein ARALYDRAFT_893877 [Arabidopsis lyrata subsp.
lyrata]
gi|297852516|ref|XP_002894139.1| hypothetical protein ARALYDRAFT_337008 [Arabidopsis lyrata subsp.
lyrata]
gi|297332653|gb|EFH63071.1| hypothetical protein ARALYDRAFT_893877 [Arabidopsis lyrata subsp.
lyrata]
gi|297339981|gb|EFH70398.1| hypothetical protein ARALYDRAFT_337008 [Arabidopsis lyrata subsp.
lyrata]
Length = 496
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 170/428 (39%), Gaps = 50/428 (11%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGD-GKVFSFDLLDSDGGEIRVTCFNAVVDR 269
I +NP + IK + LR + + D G L+D G I T + + +
Sbjct: 14 IDDINPIHDQNKIKVLI-----LRLWKAYQRDAGNTIEMVLVDEKGSRIHATVEDKNIKK 68
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQF-SF 328
F +++ G V ++ L ++ ++I T+ V C + +P++ F F
Sbjct: 69 FDSVLKEGDVVTLNPFKLIKYSGDYKSNSLSFKILFYRTTQVKPCDDFPKEVPEKYFVEF 128
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD 388
+ S + VDVIG +++V P + ++ G T + + L+D + TLW D
Sbjct: 129 GDVLN-GSRDTRVFVDVIGQIVNVGP-IEDIKIRGKSTPKLDVELRDRGNVRLICTLWAD 186
Query: 389 FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI--GTIPSTQLFINPDFAEAHELRE 446
F K+ + E V ++ +V ++ G + +T++ ++P E R
Sbjct: 187 FA-KQVKVYTEANPAAV--VCVIRCAQVKEWKGNWTISNAMGATRVLLDPPGVFVDEFRS 243
Query: 447 WFDSGGK-----------NAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVT 495
+ G +TVSI + K + V ++ EG+ VT
Sbjct: 244 GLPTDGVVLTNHDNSELFAGSTVSIRDQFLVKNHKRTVRDIVEALE-EGM-------CVT 295
Query: 496 VRAFITFIKSDSFCYTACPLMIGDRQCNKKVT----QSGNR-----WQCDRCNQEIDECD 546
+ + ++ + Y +C + CNK V SG+ + C C++++
Sbjct: 296 MVTVGSVERTSKWYYVSC------KMCNKSVEPYPENSGDDGKPPLYYCGVCDKDVSAVV 349
Query: 547 YRYLLQAQIQDQTGL-TWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFN 605
+RY L ++ D T F G +L A+ELY E + E I + V
Sbjct: 350 FRYRLVLEVSDATNYKARFLLFDAMGSTLLRRTAQELYNAVSENDPSILPSE-IGALVGR 408
Query: 606 QYLFRLKI 613
++LF++ I
Sbjct: 409 RFLFKVSI 416
>gi|218200560|gb|EEC82987.1| hypothetical protein OsI_28022 [Oryza sativa Indica Group]
Length = 705
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 150/341 (43%), Gaps = 31/341 (9%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNAR-GDGKVFSFDLL--DSDGGEIRVTCFNAVV 267
I+ L W+IKA++ LR +++ ++ SFD+L D +G I T + ++
Sbjct: 6 ISELTTKGQTWSIKAKI-----LRMWDSVNFATDEIMSFDMLLMDEEGETIHATIWKNLI 60
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D F +I +Y S ++ + K + + + +I + V + + F
Sbjct: 61 DNFRPMISENSIYAFSNFKVQESTK-YCPVDKDLKITFMYNTKVKEMKGASNKFKEYYFE 119
Query: 328 FRHISEIESAENNS--IVDVIGIVISVNP--SVPILRK--NGMETQRRILNLKDTSGRSV 381
F + N + DVIG++ + P S I++ N R + L G +
Sbjct: 120 FATRETLVDRVNKDKILSDVIGLLTKIKPIESRMIMKNSTNPRPKDIREIELLLLDGAKI 179
Query: 382 ELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEA 441
+TLWG L E V +G V+ V S V +F+G S+ + +T+L+ + + E
Sbjct: 180 RVTLWGQL----AHSLNEDV-IGNHTVVVVTSTTVQEFNGLSLRSSSATRLYTDINIPET 234
Query: 442 HELREWFDSGGKNAATVSISREIAAGGAKNEI---HKTVSQIKNEGLGRSEKPDWV-TVR 497
++ S +N + + G + ++ KT+ +I N G ++ D++ T +
Sbjct: 235 WKIISRH-SDEQNLPKLMEVDKSTQGTLEEQMFYNRKTLQEITNMGHDDTKSQDFICTTK 293
Query: 498 AFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRC 538
A I ++ ++ Y +C CNKKV + +++ C++C
Sbjct: 294 ATIDHLQDVTWWYMSC------NDCNKKVVKKIDKYYCEKC 328
>gi|302816859|ref|XP_002990107.1| hypothetical protein SELMODRAFT_428624 [Selaginella moellendorffii]
gi|300142120|gb|EFJ08824.1| hypothetical protein SELMODRAFT_428624 [Selaginella moellendorffii]
Length = 161
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 383 LTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAH 442
+ LW EG +++E + +G P++ VKSG ++D++GK I + +P+ +
Sbjct: 1 MCLWDSQAKDEGSEIKEKLGLGERPIVCVKSGHISDYNGKYISVTGGST---DPELEDVS 57
Query: 443 ELREW----FDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRA 498
L EW +D+ T S S+ + +G K VS++ + L S+ V
Sbjct: 58 RLCEWMVACYDTTSFVHVTNSSSKAVISGT------KIVSEMLSINLKVSKFSAIFRVIV 111
Query: 499 FITFIKSDSFCYTACPLMIGDRQCNKKVTQ 528
+ I++ F Y AC ++ RQC KKVT
Sbjct: 112 SVKEIQTGDFYYPACVKVVNGRQCGKKVTH 141
>gi|242051188|ref|XP_002463338.1| hypothetical protein SORBIDRAFT_02g042013 [Sorghum bicolor]
gi|241926715|gb|EER99859.1| hypothetical protein SORBIDRAFT_02g042013 [Sorghum bicolor]
Length = 520
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/380 (20%), Positives = 154/380 (40%), Gaps = 19/380 (5%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
++ + P Q W I ++ + R ++ GD K ++D G + V +
Sbjct: 9 LSDIRPGQFHWTICVSISRMWEFRGKSD-DGDIKHLDLVIIDKKGTSMYVEIPPDSIPIL 67
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRH 330
++ G++ ++ K ++ A+ + + N + + L + + E PK +
Sbjct: 68 KPQLKEGKIVVMKKFVVEQAKPEYRVVPNPYMLRLNKRTMITTVEPEPSMFPKVTYMLTP 127
Query: 331 ISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD 388
+SE+E + ++ +DVIG + V+ G RR + L+D +G ++ L L G
Sbjct: 128 LSELEQYKGSTERFLDVIGQITQVSDIANFHTVAGTMQMRRKITLRDINGVAINLFLSGA 187
Query: 389 FCNK-EGQKL----QEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHE 443
+ +G K+ QE V F +K G + S S GT + + +IN DF +
Sbjct: 188 RAMEFDGDKVYNLGQETAVVAIFVGTLMKKGLADQPSYLS-GT-SACRWYIN-DF-QIPA 243
Query: 444 LREWFDSGGKNAATVSISREIAAGGAKNEIH-KTVSQIKNEGLGRSEKPDWVTVRAFITF 502
++E+++ V + + KTV Q+K+ +
Sbjct: 244 IQEYYNMLPSEVDAVDKVEISETKTMQQHVQQKTVLQLKDMDPFEQTNTKFQCTVTITKL 303
Query: 503 IKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLT 562
+ + Y+AC + CN + R++C + + +E RY L D+T
Sbjct: 304 SLNQGWYYSACKI------CNTRCYYINGRYKCAKTDCPSNEAQDRYKLCFMAADETYEL 357
Query: 563 WVTAFQESGEEILGCPAKEL 582
AF + ++++G P + L
Sbjct: 358 EFIAFDQKAQQLIGKPIQRL 377
>gi|20198198|gb|AAM15454.1| putative replication protein A1 [Arabidopsis thaliana]
Length = 521
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 168/398 (42%), Gaps = 39/398 (9%)
Query: 258 IRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEE 317
++VT + +F+ ++VG +I +L P+ + + + + + V C
Sbjct: 1 MQVTLRKHYIGKFHRSLKVGDWKIIDNFNLSPSTGKYKISSLSYPMGFKHNTEVSKCDSV 60
Query: 318 DDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTS 377
DS+ F I + ES + N ++D++G V+SV I+ +N ++ ++D S
Sbjct: 61 SDSVFLDLADFEGI-KTESYDENVLIDILGQVVSVGKVDEIVAQN-KPNKKLEFQIRDVS 118
Query: 378 GRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPS----TQLF 433
+ TLWG F K L+ V V+ ++ K+N+F KS +I S + +
Sbjct: 119 NELLSCTLWGVFAEKVFSALKS-VKHDQKTVVLIRYAKINNF--KSEISITSAFDVSDVI 175
Query: 434 INPDFAEAHELREWFDSGGKNAATVSI-----SREIAAGGAKNEIHKTVSQIKNEGLGRS 488
I+P E+ + S + ++I +R+I + + I + GR
Sbjct: 176 IHP--VHVPEVDLFVKSLPSDGLALTIQDSYVNRDIIKTKSVDFFDYPAKTIVDLLNGR- 232
Query: 489 EKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKV------TQSGNRWQ-------- 534
+ W + + + Y CP +CN+K+ T + R Q
Sbjct: 233 DVGQWRILGSIFAIDTDWGWFYFGCP------KCNRKIELVKESTSTVKRIQAPTKPKFW 286
Query: 535 CDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKY-ELQDDV 593
CD+ + I + RY L ++ DQTG + F+ + ++ ++EL +Y E++D
Sbjct: 287 CDKYQESITNVEARYKLHIRVMDQTGEIKLMVFENNATNLIRKSSEELLDGQYEEIEDPT 346
Query: 594 RFGEIIRSRVFNQYLFRLKI-KEELYGDEQRVKITVIR 630
++I + + F + + K +YG + K+T +
Sbjct: 347 IKPDVITNLCGKTFHFLVSVEKANIYGGKDIHKVTKVH 384
>gi|357484639|ref|XP_003612607.1| Replication protein A1-like protein [Medicago truncatula]
gi|355513942|gb|AES95565.1| Replication protein A1-like protein [Medicago truncatula]
Length = 147
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 1 MPVNLTPNSISLINGGDVNSKPLVQVMDIKLIGSTQ----ERYRFLISDSVSTQHAMLAT 56
M VNLT +I + +P++QV D+KL+ S Q E YR ++SD + Q ML
Sbjct: 14 MAVNLTQGAIITMCFTSEVWEPVLQVFDMKLVQSQQNNTTEPYRLVLSDGLYYQQGMLVV 73
Query: 57 QLNDRVKTGQVKKGSVVQLIDYICSTVQNRK 87
Q N V +G+++KGS+V+L + C V N K
Sbjct: 74 QKNHLVHSGRLQKGSIVKLSHFYCDDVLNNK 104
>gi|297822339|ref|XP_002879052.1| hypothetical protein ARALYDRAFT_901564 [Arabidopsis lyrata subsp.
lyrata]
gi|297324891|gb|EFH55311.1| hypothetical protein ARALYDRAFT_901564 [Arabidopsis lyrata subsp.
lyrata]
Length = 496
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 170/428 (39%), Gaps = 50/428 (11%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGD-GKVFSFDLLDSDGGEIRVTCFNAVVDR 269
I +NP + IK + LR + + D G L+D G I T + + +
Sbjct: 14 IDDINPIHDQNKIKVLI-----LRLWKAYQRDAGNTIEMVLVDEKGSRIHATVEDKNIKK 68
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQF-SF 328
F +++ G V ++ L ++ ++I T+ V C + +P++ F F
Sbjct: 69 FDSVLKEGDVVTLNPFKLIKYSGDYKSNSLSFKILFYRTTQVKPCDDFPKEVPEKYFVEF 128
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD 388
+ S + VDVIG +++V P + ++ G T + + L+D + TLW D
Sbjct: 129 GDVLN-GSRDTRVFVDVIGQIVNVGP-IEDIKIRGKSTPKLDVELRDRGNVWLICTLWAD 186
Query: 389 FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI--GTIPSTQLFINPDFAEAHELRE 446
F K+ + E V ++ +V ++ G + +T++ ++P E R
Sbjct: 187 FA-KQVKVYTEANPAAV--VCVIRCAQVKEWKGNWTISNAMGATRVLLDPPGVFVDEFRS 243
Query: 447 WFDSGGK-----------NAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVT 495
+ G +TVSI + K + V ++ EG+ VT
Sbjct: 244 GLPNDGVVLTNLDNSELFAGSTVSIRDQFLVKNHKRTVRDIVEALE-EGMC-------VT 295
Query: 496 VRAFITFIKSDSFCYTACPLMIGDRQCNKKVT----QSGNR-----WQCDRCNQEIDECD 546
+ + ++ + Y +C + CNK V SG+ + C C++++
Sbjct: 296 MVTVGSVERTSKWYYVSC------KMCNKSVEPYPENSGDDGKPPLYYCGICDKDVSAVV 349
Query: 547 YRYLLQAQIQDQTGL-TWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFN 605
+RY L ++ D T F G +L A+ELY E + E I + V
Sbjct: 350 FRYRLVLEVSDATNYKARFLLFDAMGSTLLRRTAQELYNAVSENDPSILPSE-IGALVGR 408
Query: 606 QYLFRLKI 613
++LF++ I
Sbjct: 409 RFLFKVSI 416
>gi|297838105|ref|XP_002886934.1| hypothetical protein ARALYDRAFT_894112 [Arabidopsis lyrata subsp.
lyrata]
gi|297332775|gb|EFH63193.1| hypothetical protein ARALYDRAFT_894112 [Arabidopsis lyrata subsp.
lyrata]
Length = 496
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 170/428 (39%), Gaps = 50/428 (11%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGD-GKVFSFDLLDSDGGEIRVTCFNAVVDR 269
I +NP + IK + LR + + D G L+D G I T + + +
Sbjct: 14 IDDINPIHDQNKIKVLI-----LRLWKAYQRDAGNTIEMVLVDEKGSRIHATVEDKNIKK 68
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQF-SF 328
F +++ G V ++ L ++ ++I T+ V C + +P++ F F
Sbjct: 69 FDSVLKEGDVVTLNPFKLIKYSGDYKSNSLSFKILFYRTTQVKPCDDFPKEVPEKYFVEF 128
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD 388
+ S + VDVIG +++V P + ++ G T + + L+D + TLW D
Sbjct: 129 GDVLN-GSRDTRVFVDVIGQIVNVGP-IEDIKIRGKSTPKLDVELRDRGNVRLICTLWAD 186
Query: 389 FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI--GTIPSTQLFINPDFAEAHELRE 446
F K+ + E V ++ +V ++ G + +T++ ++P E R
Sbjct: 187 FA-KQVKVYTEANPAAV--VCVIRCAQVKEWKGNWTISNAMGATRVLLDPPGVFVDEFRS 243
Query: 447 WFDSGGK-----------NAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVT 495
+ G +TVSI + K + V ++ EG+ VT
Sbjct: 244 GLPTDGVVLTNHDNSELFAGSTVSIRDQFLVKNHKRTVRDIVEALE-EGM-------CVT 295
Query: 496 VRAFITFIKSDSFCYTACPLMIGDRQCNKKV----TQSGNR-----WQCDRCNQEIDECD 546
+ + ++ + Y +C + CNK V SG+ + C C++++
Sbjct: 296 MVTVGSVERTSKWYYVSC------KMCNKSVEPYPENSGDDGKPPLYYCGVCDKDVSAVV 349
Query: 547 YRYLLQAQIQDQTGL-TWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFN 605
+RY L ++ D T F G +L A+ELY E + E I + V
Sbjct: 350 FRYRLVLEVFDATNYKARFLLFDAMGSTLLRRTAQELYNAVSENDPSILPSE-IGALVGR 408
Query: 606 QYLFRLKI 613
++LF++ I
Sbjct: 409 RFLFKVSI 416
>gi|78101555|pdb|2B29|A Chain A, N-Terminal Domain Of The Rpa70 Subunit Of Human
Replication Protein A.
gi|82407984|pdb|2B3G|A Chain A, P53n (Fragment 33-60) Bound To Rpa70n
Length = 123
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 71/110 (64%), Gaps = 9/110 (8%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD N KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ Q+
Sbjct: 15 AIMQKGDTNIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEEQL 74
Query: 68 KKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCEP----IGNPKIFSE 112
V Q+ +I +T+++ R++++++ +E ++ E IGNP ++E
Sbjct: 75 SSNCVCQIHRFIVNTLKDGRRVVILMELE-VLKSAEAVGVKIGNPVPYNE 123
>gi|4006824|gb|AAC95166.1| putative replication protein A1 [Arabidopsis thaliana]
Length = 456
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 155/394 (39%), Gaps = 27/394 (6%)
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE 302
G+ L+D G ++ + +F + G +I+ +L P + +++
Sbjct: 12 GESIKMILVDKAGDKMYAAVRREQIKKFERCVTEGVWKIITTITLNPTSDQYRISDLKYK 71
Query: 303 IFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKN 362
I +TV C DS+ F I S +N + DV+G VI + L N
Sbjct: 72 IGFVFKTTVSPCDTVSDSLFLSLAKFDVILS-GSTNSNILHDVMGQVID-RSEIQDLNAN 129
Query: 363 GMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG- 421
T++ +L+D + LWG + + QE D G L ++ K+N ++
Sbjct: 130 NKPTKKIDFHLRDQHDTRLACILWGKYAEIVDKACQESTD-GIVVCL-IRFAKINLYNDT 187
Query: 422 KSIGTI-PSTQLFINPDFAEAHELREWFDSGGKN-AATVSISREIAAGGAKNEIHKTVSQ 479
+S+ +Q+F++P AE ++ + G ++ S + + A ++ Q
Sbjct: 188 RSVSNFFDVSQVFVDPTLAELDLFKQSIPTDGLTLGSSGSFHKRLYAPRTGDDDGDYPRQ 247
Query: 480 IKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN-------- 531
E L S+ TV ++ I +D CY C R NKKV +
Sbjct: 248 TIKEVLTSSDVGKCKTV-CTVSAIDTDWPCYYFCC-----RAHNKKVVKEEAIKLEDVKQ 301
Query: 532 ----RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKY 587
R+ C+ CN ++ L I DQT F +EILG A +L +
Sbjct: 302 PQKPRFWCEICNGFAKSVVAKFCLHLHIMDQTDEARCMLFDSHAKEILGTTAPQLLDGSF 361
Query: 588 -ELQDDVRFGEIIRSRVFNQYLFRLKI-KEELYG 619
E++D ++I + F L I +E ++G
Sbjct: 362 DEIEDPTVLPDVINGLKGKTFQFLLCIQRENIFG 395
>gi|357470041|ref|XP_003605305.1| Replication factor A protein [Medicago truncatula]
gi|355506360|gb|AES87502.1| Replication factor A protein [Medicago truncatula]
Length = 283
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 14/212 (6%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
L+D G I + ++ + E ++ G V+ IS + ++ +NE+++ +
Sbjct: 27 LMDRKGDRIGASIRRTLIYKSKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINT 86
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEI--ESAENNSIVDVIGIVISVNPSVPILRKNGMETQ 367
V L + +P +SF ++ ES +NN +VDVIG++ V R +G++T+
Sbjct: 87 KVKLS--KTVLVPTNVYSFTSAYDVFNESYDNNFLVDVIGVMTGVGVEREYER-DGVKTK 143
Query: 368 RRILNLKDTSGRSVELTLWGDFCNKEGQKLQ--EMVDVGFFPVLSVKSGKVNDFSGKSI- 424
++ L D++G + TL+G++ + L E +V V+++ KV F GK
Sbjct: 144 MNVIEL-DSNGYRFKCTLFGEYVEELSSFLSSGESQNV----VVAIMLAKVKLFQGKPAL 198
Query: 425 -GTIPSTQLFINPDFAEAHELREWFDSGGKNA 455
ST++ NP+ E ELR+ F S N+
Sbjct: 199 QNAFSSTRITFNPEIGETKELRKSFLSANTNS 230
>gi|297838097|ref|XP_002886930.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332771|gb|EFH63189.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 496
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 90/428 (21%), Positives = 169/428 (39%), Gaps = 50/428 (11%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGD-GKVFSFDLLDSDGGEIRVTCFNAVVDR 269
I +NP + IK + LR + + D G L+D G I + + +
Sbjct: 14 IDDINPIHDQNKIKVLI-----LRLWKAYQRDAGNTIEMVLVDEKGSRIHAIVEDKNIKK 68
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQF-SF 328
F +++ G V ++ L ++ ++I T+ V C + +P++ F F
Sbjct: 69 FDSVLKEGDVVTLNPFKLIKYSGDYKSNSLSFKILFYRTTQVKPCDDFPKEVPEKYFVEF 128
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD 388
+ S + VDVIG +++V P + ++ G T + + L+D + TLW D
Sbjct: 129 GDVLN-GSRDTRVFVDVIGQIVNVGP-IEDIKIRGKSTPKLDVELRDRGNVRLICTLWAD 186
Query: 389 FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI--GTIPSTQLFINPDFAEAHELRE 446
F K+ + E V ++ +V ++ G + +T++ ++P E R
Sbjct: 187 FA-KQVKVYTEANPAAV--VCVIRCAQVKEWKGNWTISNAMGATRVLLDPPGVFVDEFRS 243
Query: 447 WFDSGGK-----------NAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVT 495
+ G +TVSI + K + V ++ EG+ VT
Sbjct: 244 GLPTDGVVLTNHDNSELFAGSTVSIRDQFLVKNHKRTVRDIVEALE-EGM-------CVT 295
Query: 496 VRAFITFIKSDSFCYTACPLMIGDRQCNKKVT----QSGNR-----WQCDRCNQEIDECD 546
+ + ++ + Y +C + CNK V SG+ + C C++++
Sbjct: 296 MVTVGSVERTSKWYYVSC------KMCNKSVEPYPENSGDDGKPPLYYCGVCDKDVSAVV 349
Query: 547 YRYLLQAQIQDQTGL-TWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFN 605
+RY L ++ D T F G +L A+ELY E + E I + V
Sbjct: 350 FRYRLVLEVSDATNYKARFLLFDAMGSTLLRRTAQELYNAVSENDPSILPSE-IGALVGR 408
Query: 606 QYLFRLKI 613
++LF++ I
Sbjct: 409 RFLFKVSI 416
>gi|32565075|ref|NP_494733.2| Protein R03H10.6 [Caenorhabditis elegans]
gi|351062333|emb|CCD70303.1| Protein R03H10.6 [Caenorhabditis elegans]
Length = 324
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 15/188 (7%)
Query: 205 PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFN 264
PA + PIA LN + I RVT D RR KVFSF++ D +G IR F
Sbjct: 117 PAAVTPIANLNDSVDNFKIHGRVTLMDDKRR------PEKVFSFEITDVNGYTIRCVAFG 170
Query: 265 AVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQ 324
+ R Y I + Y ++ G +K +N + +EI L+ T++ ++PK
Sbjct: 171 ELGVRLYGSIAKDQSYYLTGGKVKNGHTLYNQTGHAFEIILDEFPTIEPAPAV-LTVPKL 229
Query: 325 QFSFRHISEIESAE-NNSIVDVIGIVISVNPSV----PILRKNGMETQRRILNLKDTSGR 379
+ + +++ + +DVI V +N + PI +N R ++ + D++ R
Sbjct: 230 NLNRVMLCNVQNEQYYRKPIDVIVAVEEINDFLDDYHPI--ENKPPVLRNMVVIDDSNFR 287
Query: 380 SVELTLWG 387
+ LTLWG
Sbjct: 288 -IRLTLWG 294
>gi|402225049|gb|EJU05111.1| hypothetical protein DACRYDRAFT_98791 [Dacryopinax sp. DJM-731 SS1]
Length = 504
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 163/419 (38%), Gaps = 52/419 (12%)
Query: 225 ARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISK 284
AR++ K + YN G G+V + DS G+I FN+ + +E G+VY I
Sbjct: 100 ARLSGKDTVHAYNTQNGKGRVHNLTFHDS-MGKIGAVAFNSATE-VTNSLESGQVYSICN 157
Query: 285 GSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVD 344
++ A+ +N + +++ + + +L D +P ++I ++ I D
Sbjct: 158 ATVCIAKAAYNKTLSLFQLTISMNTEFELVQNFD--LPIHYLDIVPFAKIADMGSDDICD 215
Query: 345 VIGIVISVNPSV-------PILRKNGMETQRRILNLKDTSGRSVELTLWGD----FCNKE 393
+ IV++V + +L K T R +++ D S + L W + F N E
Sbjct: 216 IHAIVVTVGAGICCKPSHSELLAKE--VTYFRKIHIVDQSSVMLCLCTWQELGEVFKNHE 273
Query: 394 GQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTI-PSTQLFINPDFAEAHELREWFDSGG 452
G+ +S+ + + + G S+ T T + N D + L+ W++
Sbjct: 274 GE------------AVSINNLQWDYHDGPSLVTAGKCTHIHFNDDDPDHQALQLWYEENL 321
Query: 453 KNAATVSISREIAAGGA---------KNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFI 503
+ T+ + AAG K I + +S + G+ D + A +
Sbjct: 322 ETQWTLLLGHTTAAGAQLTNTAPPRDKLCIKEVLSCV-----GKKLDIDTFALVATCKIL 376
Query: 504 KSDSFCYTACPLMIGDRQCNKK---VTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTG 560
Y AC D+ C+K V + + W C CN + Y LQ + + T
Sbjct: 377 LLKDIGYYACM----DKHCHKAAKCVAGTLHLWNCPHCNTRFTKPHSIYCLQLHLDNGTR 432
Query: 561 LTWVTAFQESGEEILGCPAKELYMLKYELQ-DDVRFGEIIRSRVFNQYLFRLKIKEELY 618
VT F ++ G A L+ ++ D+ + + +V +Y F ++ Y
Sbjct: 433 ECVVTTFDFIRCQLFGDWAVMLWNQQHSADPDEHTVFQAVLDQVAGKYSFTIQANTVCY 491
>gi|297725599|ref|NP_001175163.1| Os07g0418100 [Oryza sativa Japonica Group]
gi|255677702|dbj|BAH93891.1| Os07g0418100 [Oryza sativa Japonica Group]
Length = 2266
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 15/231 (6%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
IA+L P G ++ R++ + R N+ L+D G I + ++F
Sbjct: 1440 IASLEPGDGNPTLRIRISRLWEYRDQND-ESILHYIGLVLVDQKGSSIAAMIYPPCDNKF 1498
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRH 330
+I G+VYL++ +KP K++ + N+ I STV+ C + D+ + +S +
Sbjct: 1499 KPLITEGKVYLLTYYRVKPCTKHYRPVDNKLAITFTWWSTVEECVDVPDNFAQYAYSLKP 1558
Query: 331 ISEIESA--ENNSIVDVIGIV--ISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLW 386
+E+ S +S DVIGI+ IS +V K+G +R + R+ EL L+
Sbjct: 1559 FNELRSHVDRKDSFTDVIGIITEISSVTTVQTRIKDGDSLKRNVYI------RNAELDLF 1612
Query: 387 GDFCNKEGQKLQEMVDVGFFPV--LSVKSGKVNDFSG--KSIGTIPSTQLF 433
F Q + V+ + P+ L + SG +G K+I I F
Sbjct: 1613 PKFETFLCQIILYSVEGSYEPIKWLDLPSGPAAHNNGEEKTIAEIRELHPF 1663
>gi|328857108|gb|EGG06226.1| hypothetical protein MELLADRAFT_87378 [Melampsora larici-populina
98AG31]
Length = 191
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 23 LVQVMDIKLIG--------STQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVVQ 74
++QV+ +K +G + +R+R +ISD V AML+TQLN + G +++ +V+
Sbjct: 30 VLQVLSLKPVGVPNARAATAGPQRWRLMISDGVHFITAMLSTQLNHLIDEGMLQRMCIVK 89
Query: 75 LIDYICSTVQNRKIIVVLNMETIILDC-EPIGNP------------KIFSESELTAQKTI 121
L Y + V R+++V+L +E I C + IGNP + ++ E T + T
Sbjct: 90 LPSYTINMVGERRVVVLLTVEVIDSTCTKKIGNPTACGAPEDGAARPVVAKPEPTTEDTE 149
Query: 122 PSNNLPQPVRVNNYSAPNSGTFNLQ 146
P+ +P N+ + P+ + N Q
Sbjct: 150 PTITPSKPSVPNSNAKPSMNSSNRQ 174
>gi|442748039|gb|JAA66179.1| Hypothetical protein [Ixodes ricinus]
Length = 103
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 550 LLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLF 609
+L I D WVT FQES E ILG L LK +++ F EI ++ F ++F
Sbjct: 2 ILSVNIADYQDNQWVTCFQESAEAILGQSTAYLGELK--DKNEQAFEEIFQNANFRSFVF 59
Query: 610 RLKIKEELYGDEQRVKITVIRADQVNYSSESRYLL 644
++++K E Y DE R+K TV+ V+Y SR ++
Sbjct: 60 KIRVKLETYNDESRIKATVMDVKPVDYREYSRRMI 94
>gi|413952084|gb|AFW84733.1| hypothetical protein ZEAMMB73_599002 [Zea mays]
Length = 289
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 113/274 (41%), Gaps = 31/274 (11%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNAVV 267
PI LNP + I+ RV K + R A DG + +L+ D G I A+
Sbjct: 5 PITELNPQKINVVIRVRVIRKWEFR---GATNDGPLRHINLILADEQGTAIHAEIPAALA 61
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
+ +I++ +VY I + P++ F + N I + + + P ++
Sbjct: 62 IQKGSLIQIDKVYEIRHFRVMPSRGYFRPVHNNLMIQFTLYTQAKVVNDPPHIFPIYIYN 121
Query: 328 FRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
++E +N ++DVIG++ + P + + R + +KD S S+++ L
Sbjct: 122 LTSFEKVEENVDNRNYLIDVIGMLTQI--GAPHVAGYNNSSIVRDIFIKDISDASLKIML 179
Query: 386 WGD---------FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS-IGTIPSTQLFIN 435
WGD CN+ K ++ VG F G+S + + +T + N
Sbjct: 180 WGDQASGFSIDNVCNESNNKPIVIMFVGCL---------AKQFKGQSYLSSTTATTWYFN 230
Query: 436 PDFAEAHELREWFDSGGKNAATV-SISREIAAGG 468
P+ EA E + + G NA + S +I GG
Sbjct: 231 PNIPEAQEY--YINHKGLNAPPLYHDSYKITNGG 262
>gi|225464095|ref|XP_002263643.1| PREDICTED: uncharacterized protein LOC100255160 [Vitis vinifera]
Length = 979
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 438 FAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPD 492
F+E +L+EWFD G+N +VSISRE+ G + ++ KT+SQI++E G SEKPD
Sbjct: 926 FSEGCKLKEWFDKEGRNTPSVSISREVITIG-RTDVRKTISQIRDERQGTSEKPD 979
>gi|321455751|gb|EFX66876.1| hypothetical protein DAPPUDRAFT_331651 [Daphnia pulex]
Length = 245
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 39/176 (22%)
Query: 275 EVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEI 334
+VG V + ++KPA ++ ++N +EI +F + +
Sbjct: 98 DVGEV--TEEATVKPANNKYSSMRNGYEI-----------------------TFNQNTAL 132
Query: 335 ESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEG 394
+ EN+SIVDVIG+V+ + V I +KN + R L K + E+TL
Sbjct: 133 PNLENDSIVDVIGLVLYSSEFVFIDKKNKVS---RFLEAKLVGSTNTEVTL--------- 180
Query: 395 QKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDS 450
L ++VD VK N+F G + T+ ST + +NP EAH+LREW+++
Sbjct: 181 SLLGKLVDQRIVAYKGVKIS--NNFGGCYLETLSSTVVQVNPAMNEAHQLREWYNN 234
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 35/146 (23%)
Query: 14 NGGDVNSKPLVQVMDIKLI-GSTQERYRFLISDS-VSTQHAMLATQLNDRVKTGQVKKGS 71
NG N ++QV+D K + G Q+RYR LISD S ++ MLAT LN + GQ+K +
Sbjct: 23 NGLPKNKTVILQVLDYKAVKGDKQDRYRLLISDGKYSYEYGMLATHLNHLIVDGQLKNFT 82
Query: 72 VVQLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKIFSE-SELTAQKTI-PSNNLPQP 129
++++ E IGNP+ ++ E+T + T+ P+NN
Sbjct: 83 IIKV-------------------------EEKIGNPQTLNDVGEVTEEATVKPANNKYSS 117
Query: 130 VRVNNYSAPNSGTFNLQNSGTFNSQN 155
+R N Y TFN QN+ N +N
Sbjct: 118 MR-NGYEI----TFN-QNTALPNLEN 137
>gi|388499736|gb|AFK37934.1| unknown [Lotus japonicus]
Length = 406
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 156/392 (39%), Gaps = 48/392 (12%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNA 265
I P+ L P W IK RV L + G+ K S +L LD GG+I+ T
Sbjct: 7 IDPVVTLCPPNHNWRIKVRVVR---LWIADGFAGENKPASMELILLDQHGGKIQATVRKL 63
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQ 325
+ ++ E G VY+I+ L P + + + I + + E IP+
Sbjct: 64 MFRKWGEQFVEGNVYIITFFHLIPNLGAYRPTDHAFRILFNPKTKI--IPAESSIIPRWG 121
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
FS + S++ N+ +V + + K+ + T+ +L + D G+ +E L
Sbjct: 122 FSLKDSSQL----NDDGFQTEYLVATSEERTYV--KDDIVTKMMLLEISDDKGK-LECAL 174
Query: 386 WGDFCN-----KEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI--GTIPSTQLFINPDF 438
+G++ L++ PV+ ++ K+ F GK++ + ++++ NP+
Sbjct: 175 FGEYVQIVLDYLSSNPLEK-------PVVVLQLAKLKSFRGKNVLQNVMKASRIIFNPEV 227
Query: 439 AEAHELREWFDSGGKNAATVSISREIAAGGA--------KNEIHKTVSQIKNEGLGRSEK 490
AEA L + SG + I+ + N KT+ + NE +E
Sbjct: 228 AEAESLMDRI-SGLNMQPNQPVGHIISPNPSVPIFEDFMNNYPKKTICAL-NE---TTED 282
Query: 491 PDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYL 550
++ + ++ D + Y AC +C+K VT + C C + + RY
Sbjct: 283 GLFIVYGTVVGLLQDDLWWYFAC-------KCHKAVTFDDGLYFCPGCCKHVMNVSARYK 335
Query: 551 LQAQIQDQTGLTWVTAFQESGEEILGCPAKEL 582
++ ++ D T F ++ K++
Sbjct: 336 IKLEVFDGTDSGNFLLFDSDAHHLIKKSCKDM 367
>gi|391325707|ref|XP_003737369.1| PREDICTED: probable replication factor A 73 kDa subunit-like
[Metaseiulus occidentalis]
Length = 228
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 97/228 (42%), Gaps = 11/228 (4%)
Query: 229 AKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLK 288
K D++ + DG +FSF L D + +I V + +E I+ G Y I +
Sbjct: 2 TKSDMKTFKKDNTDGNLFSFTLAD-NTADINVLVTGELGHEMFEKIQTGHCYQICDFKQR 60
Query: 289 PAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGI 348
P+ + + E+ L S V + +PK+ + I++I E ++D+ I
Sbjct: 61 PSHPLYKVTNHTCELLLGKISEVRQI--DGGHLPKKVEKYFTINQIRDTEVGKMIDLQAI 118
Query: 349 VISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPV 408
+ V K G R+ + L D S + V LTLWG +K + ++VD F
Sbjct: 119 IYDVGEIHSYSGKAGDIRNRQNILLVDDSRKIVSLTLWGSLIHKVDDREGQVVD---FQK 175
Query: 409 LSVKSGKVNDFSGKSIGTIPSTQL-FINPDFAEAHELREWFDSGGKNA 455
LSVK K K++ + +T + F + EL +W+ S N
Sbjct: 176 LSVKEFKAR----KNLSSTGNTSIQFPIRSNSRTRELEDWWRSNKGNV 219
>gi|385305380|gb|EIF49361.1| subunit of heterotrimeric replication protein a [Dekkera
bruxellensis AWRI1499]
Length = 138
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 74/136 (54%), Gaps = 10/136 (7%)
Query: 290 AQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIV 349
A+ +++LK+++E+ + + ++ C + D +PK F F + ++ + +N +++DV+GI+
Sbjct: 2 AKPQYSNLKHQYELQFDRDTVIEECND-DXGVPKLHFDFVKLDQVXNLDNGTVIDVLGIL 60
Query: 350 ISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPV 408
V+ I+ R G RR + + D + +V + LW NK ++ ++ V
Sbjct: 61 KEVHDKQEIVSRSTGKPFDRREVEIVDDTHFAVTVALW----NKHAREF----NLSTGTV 112
Query: 409 LSVKSGKVNDFSGKSI 424
++ K +V D+ GKS+
Sbjct: 113 VAFKGARVQDYGGKSL 128
>gi|321456582|gb|EFX67685.1| hypothetical protein DAPPUDRAFT_330783 [Daphnia pulex]
Length = 182
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 48/211 (22%)
Query: 244 KVFSFDLLDSD----GGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKN 299
K SF LLD + G E+ N + +VG V + ++KPA ++ ++N
Sbjct: 5 KNHSFHLLDVEPLVPGSEVEEKIGNPQT-----LNDVGEV--TEEAAVKPANNKYSSMRN 57
Query: 300 EWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPIL 359
+EI +F + + + EN+SIVDVIG+V+ + V I
Sbjct: 58 GYEI-----------------------TFNQNTALPNLENDSIVDVIGLVLYSSEFVFID 94
Query: 360 RKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDF 419
+KN + R L K + E+TL L ++VD VK N+F
Sbjct: 95 KKNKV---SRFLEAKLVGSTNTEVTL---------SLLGKLVDQRIVAYKGVKIS--NNF 140
Query: 420 SGKSIGTIPSTQLFINPDFAEAHELREWFDS 450
G + T+ ST + +NP EAH+LREW+++
Sbjct: 141 GGCYLETLSSTVVQVNPAMNEAHQLREWYNN 171
>gi|321457156|gb|EFX68248.1| hypothetical protein DAPPUDRAFT_330274 [Daphnia pulex]
Length = 227
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 5/133 (3%)
Query: 315 TEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLK 374
TEE P F+F ++ + EN SIVDVIG+V+ + V + K ++
Sbjct: 54 TEEAAEKPTITFNFVPFDQLTNLENISIVDVIGLVLHLQEKVLVETKTTKISRSLTAEFV 113
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
D++ V L N G L+++ D + VK N F + + T+ ST + I
Sbjct: 114 DSTNTEVRL---HSLFNYRGSLLEKVADKCIVALSGVKIS--NKFGRRYLETLSSTVVQI 168
Query: 435 NPDFAEAHELREW 447
NPD E ELREW
Sbjct: 169 NPDMTEVRELREW 181
>gi|413954915|gb|AFW87564.1| hypothetical protein ZEAMMB73_967726 [Zea mays]
Length = 289
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 112/274 (40%), Gaps = 31/274 (11%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNAVV 267
PI LNP + I+ RV K + R A DG + +L+ D G I A+
Sbjct: 5 PITELNPQKINVVIRVRVIRKWEFR---GATNDGPLRHINLILADEQGTAIHAEIPAALA 61
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
+I++ VY I + P++ F + N I + + + P ++
Sbjct: 62 IEKGSLIQIDIVYEIRHFRVMPSRGYFKPVHNNLMIQFTLYTQAKVVNDPPHIFPIYIYN 121
Query: 328 FRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
++E +N ++DVIG++ + P + + R + +KD S S+++TL
Sbjct: 122 LTSFEKVEENVDNRNYLIDVIGMLTQI--GAPHVAGYNNSSIVRDIFIKDISDASLKITL 179
Query: 386 WGD---------FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS-IGTIPSTQLFIN 435
WGD CN+ K ++ VG F G+S + + +T + N
Sbjct: 180 WGDQASGFSIDNVCNESNNKPIVIMFVGCL---------AKQFKGQSYLSSTTATTWYFN 230
Query: 436 PDFAEAHELREWFDSGGKNAATV-SISREIAAGG 468
P+ EA E + + G NA + S +I GG
Sbjct: 231 PNIPEAQEY--YINHLGLNAPPLYHDSYKITNGG 262
>gi|321449556|gb|EFX61951.1| hypothetical protein DAPPUDRAFT_337759 [Daphnia pulex]
Length = 545
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 18/140 (12%)
Query: 5 LTPNSI-SLINGGDVNSKPLVQVMDIKLI-GSTQERYRFLISD-SVSTQHAMLATQLNDR 61
LT +I S+I G N P++QV+ K++ G ERYR LISD S + +LATQLN
Sbjct: 9 LTSGAIPSIIGNGLHNETPILQVLGFKILEGDNNERYRILISDGKYSYAYGILATQLNHL 68
Query: 62 VKTGQVKKGSVVQLIDYICSTV-------QNRKIIVVLNMETIILDC---EPIGNPKIFS 111
+ Q++ +++++ ++ + V +KI+++L++E I+ E IGNP+ +
Sbjct: 69 IWNAQLENFTIIRVKKFVVNKVATEAAGKDEKKIMILLDVEPIVPGSEVGEKIGNPQTLN 128
Query: 112 E-----SELTAQKTIPSNNL 126
+ +E A K P N+
Sbjct: 129 DNVGEVTEEAAAKPAPLGNI 148
>gi|302783422|ref|XP_002973484.1| hypothetical protein SELMODRAFT_413871 [Selaginella moellendorffii]
gi|300159237|gb|EFJ25858.1| hypothetical protein SELMODRAFT_413871 [Selaginella moellendorffii]
Length = 259
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 345 VIGIVISVNPSVPILRKNGMETQ-RRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDV 403
V G V S + S I R N T ++ G SV+L LW +EG +Q D
Sbjct: 43 VQGTVYSFSGSGGIRRSNQAYTPFEATWEIQANKGHSVDLCLWDLKAEEEGSYIQ---DS 99
Query: 404 GFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWF 448
G P++ VK GKV D++GKS+ I + + I P+ +LREW
Sbjct: 100 GVQPIICVKGGKVLDYNGKSLSAIGVSTILIEPEMEAMADLREWM 144
>gi|125547080|gb|EAY92902.1| hypothetical protein OsI_14707 [Oryza sativa Indica Group]
Length = 455
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 117/265 (44%), Gaps = 23/265 (8%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
L+D G + D+F +++ +VY SK + P++ + N++ I L +
Sbjct: 20 LVDEKGNAMYAEIPGVEADKFRPLLQESKVYTFSKFLVLPSKPAYKPFPNKYMIKLTPWT 79
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIE--SAENNSIVDVIGIVISVNPSVPI-LRKNGMET 366
V+ E P F+ S++ DVIG++I V+ + + +T
Sbjct: 80 NVEQVNEVPADFPSHVFNLVQFSDLSLRVGMQEYFTDVIGMIIGVSKLAYVRMASKTSDT 139
Query: 367 QRRILNLKDTSGRSVELTLWG----DFCNKEGQKL-QEMVDVGFFPVLSVKSGKVNDFSG 421
+R++ L+D + V+L LWG DF + Q+ V VG F G +
Sbjct: 140 PKRVIALRDLANCEVKLVLWGEHALDFDADAVHSVGQDNVVVGIF------VGTLMKAYN 193
Query: 422 KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIK 481
K++ + + ++N D E+ ++FDS G +A + + I+AG + +Q++
Sbjct: 194 KTLSGGSACKWYLNEDIP---EINQFFDSLGDSAPKI---QWISAGEKSFGSSQRPAQLE 247
Query: 482 NEGLGRSEKPD-WVTVRAFITFIKS 505
++ + +K D W V+ TF+ S
Sbjct: 248 HKSVADLKKIDPWEAVK--FTFVVS 270
>gi|391331921|ref|XP_003740388.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 217
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 243 GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWE 302
GK ++D+ +I++ FN +F EI++ + Y I + + A FN ++ E
Sbjct: 2 GKCSPSQVVDA-STDIQIVAFNDNCLQFSEILQEHQEYDIEGFACRQANPIFNTTSSKLE 60
Query: 303 IFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK- 361
I L + + I ++ ++ SE++S + N IVDV G++I V+P RK
Sbjct: 61 IVLNKGTKIRALNRATLRIAEKSPNYVSFSELQSMKENDIVDVCGVIIHVSPVEEFTRKR 120
Query: 362 NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG 421
+G +R L + D + + + LW + N E L E V V SV+ G++N F G
Sbjct: 121 DGKPIVKRELRIVDEDRKILTINLWNERTNTE---LVEKVAV------SVRHGRINIFRG 171
>gi|8569640|pdb|1EWI|A Chain A, Human Replication Protein A: Global Fold Of The N-Terminal
Rpa-70 Domain Reveals A Basic Cleft And Flexible C-
Terminal Linker
Length = 114
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 62/91 (68%), Gaps = 4/91 (4%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD N KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ Q+
Sbjct: 12 AIMQKGDTNIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEEQL 71
Query: 68 KKGSVVQLIDYICSTVQN-RKIIVVLNMETI 97
V Q+ +I +T+++ R++++++ +E +
Sbjct: 72 SSNCVCQIHRFIVNTLKDGRRVVILMELEVL 102
>gi|225446433|ref|XP_002276442.1| PREDICTED: uncharacterized protein LOC100264432 [Vitis vinifera]
gi|302143328|emb|CBI21889.3| unnamed protein product [Vitis vinifera]
Length = 104
Score = 58.2 bits (139), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 54/96 (56%)
Query: 554 QIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKI 613
++ D +G ++ F E E I GC A EL LK + ++ RF ++ ++ LF++ +
Sbjct: 4 KVSDDSGEAILSLFNEQAERIFGCSADELDKLKPQEGEEKRFQHKMKDAIWVPNLFQIIV 63
Query: 614 KEELYGDEQRVKITVIRADQVNYSSESRYLLDLISK 649
+ Y +E+R IT Q ++ +ESR+LLD ISK
Sbjct: 64 AQHEYKNEKRQWITARAVVQDDFEAESRFLLDEISK 99
>gi|413917703|gb|AFW57635.1| hypothetical protein ZEAMMB73_449704 [Zea mays]
Length = 459
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 115/281 (40%), Gaps = 39/281 (13%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSD--------GGEIRVT 261
PI LNP + I+ RV K + R A DG + +L+ +D G I
Sbjct: 5 PITELNPQKINVVIRVRVIRKWEFR---GATNDGPLRHINLILADEQVIIFFKGTAIHAE 61
Query: 262 CFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSI 321
A+ +I++ +VY I + P++ F + N I + + +
Sbjct: 62 IPAALAIEKGSLIQIDKVYEIRHFRVMPSRGYFKPVHNNLMIQFTLYTQAKVVNDPPHIF 121
Query: 322 PKQQFSFRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGR 379
P ++ ++E +N ++DVIG++ + S P + + R + +KD S
Sbjct: 122 PIYIYNLTSFEKVEENVDNRNYLIDVIGMLTQI--SAPHVVGYNNSSIVRDIFIKDISDA 179
Query: 380 SVELTLWGD---------FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI--GTIP 428
S+++TLWGD CN+ K ++ VG F G+S GT
Sbjct: 180 SLKITLWGDQASGFSINNVCNESNNKPIVIMFVGCL---------AKQFKGQSYLSGTTA 230
Query: 429 STQLFINPDFAEAHELREWFDSGGKNAATV-SISREIAAGG 468
+T F NP+ EA E + + G NA + S +I GG
Sbjct: 231 TTWYF-NPNIPEAQEY--YINHKGLNAPPLYHDSYKITNGG 268
>gi|50838977|gb|AAT81738.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108708958|gb|ABF96753.1| hypothetical protein LOC_Os03g31560 [Oryza sativa Japonica Group]
Length = 1500
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 98/241 (40%), Gaps = 30/241 (12%)
Query: 223 IKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
I ARV+ + NN K+F DL LD G I + + ++ +++ +VY
Sbjct: 996 ILARVSRLWNFTDLNN---HTKIFHTDLVLLDEMGTSIHAQIYPPITEKMKPLLKEEKVY 1052
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENN 340
I +++ A + + + N I +T++ P FS ++ S
Sbjct: 1053 YIDSFTVRAANRTYRPVANNLMILFSKWTTLEEHINVPPHFPGITFSLTPFEDVPSLVEK 1112
Query: 341 SIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG---------DFCN 391
+ V+G V ++ P + E+ +R L ++D S ++ +TLWG D N
Sbjct: 1113 NSFYVVGAVTTIRP-----KSRNAESLKRTLQIRDASNSTLPVTLWGERATSFDANDIYN 1167
Query: 392 KEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPST--QLFINPDFAEAHELREWFD 449
+ Q +V VG V D+ G + S+ + +IN + E EL E F
Sbjct: 1168 AGQTQAQVVVFVGTL---------VKDYRGLGLTLTGSSPCKWYINLNIPEVAELNESFS 1218
Query: 450 S 450
+
Sbjct: 1219 T 1219
>gi|62733633|gb|AAX95750.1| Eukaryotic protein of unknown function (DUF889), putative [Oryza
sativa Japonica Group]
gi|110288790|gb|ABG65978.1| hypothetical protein LOC_Os10g12174 [Oryza sativa Japonica Group]
Length = 1806
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 80/161 (49%), Gaps = 5/161 (3%)
Query: 233 LRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPA 290
L + + + K++ DL+ D GG I F ++ F ++ G+VY + +K +
Sbjct: 1339 LWEFTDCKDATKIYHIDLVLVDEKGGSIHAQIFPPLIQVFKPLLAEGKVYYLDSYRVKTS 1398
Query: 291 QKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIES--AENNSIVDVIGI 348
K++ + N + ++V+ C + + P +S ++E+ + +N S VDVIG
Sbjct: 1399 NKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYSLTPLNEVSNFVDKNESFVDVIGF 1458
Query: 349 VISVN-PSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD 388
+ ++ P++ + + + +R + + DT+ ++ ++LW +
Sbjct: 1459 ITEISTPTMLRPKSRDVSSLKRTVQICDTNNSTLNVSLWAE 1499
>gi|297743678|emb|CBI36561.3| unnamed protein product [Vitis vinifera]
Length = 107
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 343 VDVIGIVISVNPSVPILRKNGME-TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMV 401
V V G+V SV+P++ I RK+ + +R + D + ++V ++LW D GQ+L +
Sbjct: 11 VYVSGVVQSVSPTMRIRRKSHNDIVPKRDITFADKTKKTVVVSLWNDHATNVGQELLDNA 70
Query: 402 DVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAE 440
D FP++++KS KV DF S+ T+ + + +NPD E
Sbjct: 71 D--KFPIVAIKSLKVGDFQVVSLSTLSESIVLVNPDTRE 107
>gi|297736059|emb|CBI24097.3| unnamed protein product [Vitis vinifera]
Length = 115
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 343 VDVIGIVISVNPSVPILRKNGME-TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMV 401
V V G+V SV+P++ I RK+ + +R + D + ++V ++LW D GQ+L +
Sbjct: 11 VYVSGVVQSVSPTMRIQRKSHNDIVPKRDITFADKTKKTVVVSLWNDHATNVGQELLDNA 70
Query: 402 DVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAE 440
D FP++++KS KV DF S+ T+ + + +NPD E
Sbjct: 71 D--KFPIVAIKSLKVGDFQVVSLSTLSESIVLVNPDTRE 107
>gi|357503597|ref|XP_003622087.1| Replication factor A 51 kDa subunit [Medicago truncatula]
gi|355497102|gb|AES78305.1| Replication factor A 51 kDa subunit [Medicago truncatula]
Length = 466
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 135/324 (41%), Gaps = 37/324 (11%)
Query: 274 IEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS-FRHIS 332
IE G Y I K ++ ++ F +++++ L ++ + + + S F+ F+HI
Sbjct: 27 IEEGASYTIEKFLVQFNKEKFKPTNHKYKLTLIGSTIITKTSYDKISANLFNFTKFQHI- 85
Query: 333 EIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNK 392
I + ++DVIG V+ + ++ G T+ L L+D ++ TLWG F +
Sbjct: 86 -IGGTDKGVLMDVIGHVVGTT-DIKDVQVKGKMTKILDLTLEDLESNTIICTLWGHFAEQ 143
Query: 393 EGQKLQEMVDVGFFPVLSVKS-GKVNDFSGKSIGTIPS----TQLFINPDFAEAHELREW 447
+ + FP++ V ++N + + I + T+L INP+ E ++
Sbjct: 144 MNSYMS--TNGNTFPIVVVMHLCRLNVYVFGGMYGIANAFNETKLLINPNIEECCNYKKG 201
Query: 448 FDSGGKNAATVSISREIAA----------GGAKNEIHKTVSQIKNEGLGRSEKPDWVTVR 497
+G NA+ ++ A KN ++Q K G +V +
Sbjct: 202 MKTG--NASLTQGVTQMTAQSSLSLSNDLLQTKNMTILDITQAKQVGA-------YVVLA 252
Query: 498 AFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQD 557
I + +CY +C +C KKV ++ C++C+ +D R+++ + D
Sbjct: 253 KIIGIDTNKKWCYVSC------NKCFKKVEPVCTKYFCEKCDTLVDATK-RFMVHIHVMD 305
Query: 558 QTGLTWVTAFQESGEEILGCPAKE 581
+G T + F + G KE
Sbjct: 306 DSGSTTIVLFDGVISQHFGKTTKE 329
>gi|297725313|ref|NP_001175020.1| Os07g0113000 [Oryza sativa Japonica Group]
gi|255677455|dbj|BAH93748.1| Os07g0113000 [Oryza sativa Japonica Group]
Length = 1790
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 149/369 (40%), Gaps = 46/369 (12%)
Query: 233 LRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPA 290
L + + + K++ DL+ D GG I F ++ F ++ G+VY + +K +
Sbjct: 1244 LWEFTDCKDATKIYHIDLVLVDEKGGSIHAQIFPPLLQVFKPLLTEGKVYYLDSYRVKTS 1303
Query: 291 QKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIES--AENNSIVDVIGI 348
K++ + N + ++V+ C + + P ++ ++E+ + +N S VDVIG
Sbjct: 1304 NKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYTLTPLNEVSNFVDKNESFVDVIGF 1363
Query: 349 VISVN-PSVPILRKNGMETQRRILNLKDTSGRSVELTLW--------GDFCNKEGQKLQE 399
+ ++ P++ + + +RI+ + D + ++ ++LW + +K GQ+
Sbjct: 1364 ITEISTPTMLRPKSRDASSLKRIIQICDANNSTLNVSLWAEQALAFDAESIHKAGQR--- 1420
Query: 400 MVDVGFFPVLSVKSGKVNDFSGKSIGTI-----PSTQLFINPDFAEAHELREWFDSG-GK 453
L++ G + G + I P+T I + A+ +RE D K
Sbjct: 1421 ---------LALSRGSACKWIGANFQPIKLLQAPTTN--IADENADDKTVRELLDMNPHK 1469
Query: 454 NAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTAC 513
N A + IA A ++ + + + R+ VT+R S+ Y +C
Sbjct: 1470 NRAPAT---NIADENADDKTVRELLDMNPHKNRRTRFQANVTIRK---ICNDSSWWYNSC 1523
Query: 514 PLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEE 573
+C + V G ++C C I RY L D T F + +
Sbjct: 1524 ------EKCLRVVKPFGYTYKCTGC-YNIAMAVPRYKLSVLAGDDTADAVFILFGKIAQR 1576
Query: 574 ILGCPAKEL 582
I+ P + L
Sbjct: 1577 IVRKPVELL 1585
>gi|218189336|gb|EEC71763.1| hypothetical protein OsI_04360 [Oryza sativa Indica Group]
Length = 397
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 114/269 (42%), Gaps = 36/269 (13%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
L+D G + D+F +++ +VY SK + P++ + N++ I L +
Sbjct: 20 LIDEKGNAMYAEIPGVEADKFRPLLQESKVYTFSKFLVLPSKPAYKPFPNKYMIKLTPWT 79
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIE--SAENNSIVDVIGIVISVNPSVPI-LRKNGMET 366
V+ E P F+ S++ DVIG++I V+ + + +T
Sbjct: 80 NVEQVNEVPADFPSHVFNLVQFSDLSLRVGMQEYFTDVIGMIIGVSKLAYVRMASKTSDT 139
Query: 367 QRRILNLKDTSGRSVELTLWG----DFCNKEGQKL-QEMVDVGFFPVLSVKSGKVND--F 419
+R++ L+D + V+L LWG DF + Q+ VG F V ++ N+
Sbjct: 140 PKRVIALRDLANCEVKLVLWGEHALDFDVDAVHNVGQDNAVVGIF-VGTLMKAYNNEETL 198
Query: 420 SGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQ 479
SG S + + ++N D E+ ++FDS G +A + + I+AG
Sbjct: 199 SGGS-----ACKWYLNEDIP---EINQFFDSLGDSAPKI---QWISAGA----------- 236
Query: 480 IKNEGLGRSEKPDWVTVRAFITFIKSDSF 508
E G S++P W+ ++ K D +
Sbjct: 237 ---ESFGLSQRPAWLEHKSVADLKKIDPW 262
>gi|7529251|emb|CAB86481.1| putative protein [Arabidopsis thaliana]
Length = 269
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 103/238 (43%), Gaps = 10/238 (4%)
Query: 205 PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFN 264
P P+ +L PY+ W I+ ++ R+Y+ G+ L+D G ++
Sbjct: 6 PLPFTPLKSLKPYKNAWRIQVKLLHV--WRQYSVKAGES--IEMILVDEAGDKMYAAVRR 61
Query: 265 AVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQ 324
+ +F + G +I+ +L P + +++I +TV C D++
Sbjct: 62 EQIKKFERCLTEGVWKIITTITLNPTSGKYRISDLKYKIGFVFKTTVSPCDSVSDALFLS 121
Query: 325 QFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELT 384
F I SA +N + DV+G V+ + L N T++ +LKD + T
Sbjct: 122 LAKFDVILS-GSANSNILHDVMGQVVD-RSEIQDLNANNKPTKKIDFHLKDQHDTRLACT 179
Query: 385 LWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFS-GKSIG-TIPSTQLFINPDFAE 440
LWG + Q QE D G L ++ K+N ++ +S+ + +Q+F++P AE
Sbjct: 180 LWGKYAEIVDQACQESTD-GIVVCL-IRFAKINLYNDSRSVSNSFDVSQVFVDPTLAE 235
>gi|290990877|ref|XP_002678062.1| single stranded DNA binding, replication factor-a protein
[Naegleria gruberi]
gi|284091673|gb|EFC45318.1| single stranded DNA binding, replication factor-a protein
[Naegleria gruberi]
Length = 1043
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 209 IPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGE---------IR 259
IP + L+P W IK +V K + + + N RG G+V + + D G+ ++
Sbjct: 541 IPFSQLDPVLDDWCIKVKVIKKHNEKSWANERGSGRVAAITIADELSGDMSLSSKQNKVK 600
Query: 260 VTCFNAVVDRFYEIIEVGRVYLISKGSL--KPAQKNF 294
+ FN ++ FY+ +E G Y ++KG L KP + F
Sbjct: 601 LIMFNDCINEFYDQMEEGESYYVNKGHLIKKPHEDFF 637
>gi|414888073|tpg|DAA64087.1| TPA: hypothetical protein ZEAMMB73_996720 [Zea mays]
Length = 483
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/384 (19%), Positives = 148/384 (38%), Gaps = 33/384 (8%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNAVV 267
P++AL ++ +V K + R A +G + D++ D G I + +
Sbjct: 5 PLSALTLQDRNAEVQIQVHRKWEFR---GAVDNGPILHIDMILTDCTGNAIHCQIPSFLA 61
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
+ +VG++Y +++ S+ A+ + + + ++++ +T++LC P +
Sbjct: 62 ATRGDEFQVGKIYKMTRFSVARAKSTYKPVDGDLMLYVKPYTTLELCHTSPSGFPLYVYH 121
Query: 328 FRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
+I+ +N+ DV+GI+ ++ P+ + + R + +K+ S +++TL
Sbjct: 122 LTSYDKIDPDGSNARNFHDVLGIITEISAIKPVGNAHIPSSYNRHVLIKNLSDDILKITL 181
Query: 386 WG------DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFA 439
WG N + Q + V F L + SG + + + NP
Sbjct: 182 WGKRAQEFSLTNTYDPQKQTPIVVLFVGCLPKEYQGEVLLSGGA-----ACHWYFNPSIE 236
Query: 440 EAHELREWFDSGGKNAATVSISR-EIAAGGAKNEIHKTVSQIKNEGLGRSEKPD--WVTV 496
EA +S N S+ + EI H + I + L + PD +
Sbjct: 237 EAEAFYSRIESEKINIELPSLDKQEITPPSFPQREHHNLKYILS--LNPHDVPDQGYECT 294
Query: 497 RAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQ 556
+ ++ Y AC C K + QC C + + C +RY L +
Sbjct: 295 VTITCIPEGKTWYYIAC------NTCPNKPSIDPVIRQCSTC-RSTNYC-FRYKLTFKAS 346
Query: 557 DQTGLTWVTAFQESGEEILG--CP 578
D T + AF I+G CP
Sbjct: 347 DGTEEAEMFAFDNVARTIIGKPCP 370
>gi|222619510|gb|EEE55642.1| hypothetical protein OsJ_04010 [Oryza sativa Japonica Group]
Length = 321
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 110/258 (42%), Gaps = 26/258 (10%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
L+D G + D+F +++ +VY SK + P++ + N++ I L +
Sbjct: 20 LIDEKGNAMYAEIPGVEADKFRPLLQESKVYTFSKFLILPSKPAYKPFPNKYMIKLTPWT 79
Query: 310 TVDLCTEEDDSIPKQQFSFRHIS--EIESAENNSIVDVIGIVISVNPSVPI-LRKNGMET 366
V+ E P F+ S + DVIG++I V+ + + +T
Sbjct: 80 NVEQVNEVPADFPSHVFNLVQFSYLSLRVGMQEYFTDVIGMIIGVSKLAYVRMASKTSDT 139
Query: 367 QRRILNLKDTSGRSVELTLWG----DFCNKEGQKL-QEMVDVGFFPVLSVKS-GKVNDFS 420
+R++ L+D + V+L LWG DF + Q+ VG F +K+ S
Sbjct: 140 PKRVIALRDLANCEVKLVLWGEHAPDFDADAVHSVGQDNAVVGIFVDTLMKAYNNEETLS 199
Query: 421 GKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVS-ISREIAAGGAKNEI----HK 475
G S + + ++N D E+ ++FDS G +A + IS + G+ HK
Sbjct: 200 GGS-----ACKWYLNEDIP---EINQFFDSLGDSAPKIQWISTGAESFGSSQRPARLEHK 251
Query: 476 TVSQIKN----EGLGRSE 489
+V+ +K E GRS+
Sbjct: 252 SVADLKKIDPWEAAGRSD 269
>gi|391348893|ref|XP_003748675.1| PREDICTED: uncharacterized protein LOC100908191 [Metaseiulus
occidentalis]
Length = 292
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 104/241 (43%), Gaps = 23/241 (9%)
Query: 223 IKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLI 282
++ RV +K R + G++FSF ++DS +I V + Y+ I VG Y +
Sbjct: 52 VQGRVKSKTPARSWQRDGSRGEIFSFIVVDS-TAQINVIVAGEDCENVYKQINVGECYKL 110
Query: 283 SKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSI 342
S KP + + +E+ L S ++ D +P++ + I+EI+S+
Sbjct: 111 SAFRQKPCNPKYKVTDHHFELQLSKISKIEEVPGND--LPRENVTSITIAEIKSSSLKEN 168
Query: 343 VDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLW----GDFCNKEGQKLQ 398
V + IV V+ ++G Q++ L+D + R + L LW G+ +EG+
Sbjct: 169 VSINFIVYEVSEPQTFSCRDGETRQKQNDVLEDDTKRIITLNLWSENVGELDGQEGR--- 225
Query: 399 EMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFIN----PDFAEAHELREWFDSGGKN 454
+++++ V ++ GK T S + + PD EL W++ G N
Sbjct: 226 ---------AINIENVSVREYKGKKNLTPTSGTAYKSARECPDDDRLSELTVWWEKDGYN 276
Query: 455 A 455
Sbjct: 277 C 277
>gi|145498019|ref|XP_001434998.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402126|emb|CAK67601.1| unnamed protein product [Paramecium tetraurelia]
Length = 555
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 159/375 (42%), Gaps = 56/375 (14%)
Query: 221 WAIKARVTAKGDLRRYN--NARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGR 278
W ++ R+ K D+ + N+ + F +LD + G I ++ + + I+E G+
Sbjct: 149 WVLEGRIVDKSDMLEFKKKNSNVLSQYFKIIILDREQGIIPGLFYDKSNLKMFPILEKGK 208
Query: 279 VYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPK-QQFSFRHISEIESA 337
VYL GS+ ++ N N+ K+ + T + E+D +PK S + I +++
Sbjct: 209 VYLFKNGSV--SKDNSNYPKS-----ITFTQFSIIQESENDDLPKIPMISPKKIYDLQGQ 261
Query: 338 ENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKL 397
+SIVD++ ++ + + R+ L + D +GR V + + + +K
Sbjct: 262 PIDSIVDLVVVIQEIKTLSDVCRQ---------LTVLDQTGRIVIKLMGKQYVTQIFKKG 312
Query: 398 QEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDF-AEAHELREWFDSG----- 451
+ ++ G L+ K+ + + + TI + + D+ E LR+W
Sbjct: 313 EIIICKG----LTYKTQQNFAYLTSNYNTI----ILNDQDYNNEVKSLRDWLQEKDIDHI 364
Query: 452 ---GKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSF 508
KN V++ ++ + V + NE G+S+ + + V ++T + F
Sbjct: 365 MKPSKNCLKVNLE----------QLEECVLKKLNE--GKSKNNEQMIVIGYLTGM--SIF 410
Query: 509 CYTACPLMIGDRQCNKKVTQSGNR--WQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTA 566
Y CP +C+ K+ + R ++C +C E + +++ I D+ T
Sbjct: 411 TYPRCP----SNRCHSKMEKVPQRDTYRCKKCYVENNSPQMSFIMNVTIMDEHTKIEATV 466
Query: 567 FQESGEEILGCPAKE 581
F + ++LG A E
Sbjct: 467 FDDYAVKLLGLSADE 481
>gi|38346906|emb|CAE03875.2| OSJNBb0015N08.3 [Oryza sativa Japonica Group]
Length = 696
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 81/401 (20%), Positives = 152/401 (37%), Gaps = 80/401 (19%)
Query: 196 HGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDG 255
HG + + IIPIA L P + + I R++ + R N + K LLD G
Sbjct: 232 HGQLYVAISRMNIIPIAELRPGRYDYMICVRISRIWEFRG-TNEDDNIKHLDLVLLDQKG 290
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
I + + ++ G + ISK ++ A+ ++
Sbjct: 291 DAIYAEIPPDAIPLLNQYLQEGNIVYISKITVNNAKPSYRA------------------- 331
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKD 375
VDVIG +I+V+ + I + RRI+ L+D
Sbjct: 332 ---------------------------VDVIGKIIAVSNAAMISTSSSDYRMRRIVKLQD 364
Query: 376 TSGRSVELTLWGDFCNK-EGQKLQEMVD----VGFFPVLSVK--SGKVNDFSGKSI---- 424
SG++++L+L G + +G+ + E+ + F S+K G SG +
Sbjct: 365 LSGKTIDLSLSGKRAVEFDGETILEVGQNNHIIAIFVGTSMKILKGTYEFLSGTTACRWY 424
Query: 425 ---GTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIK 481
IP ++F A +++ + ++ + R I HKT++++K
Sbjct: 425 INENDIPEIKMFQKCLPPHADPIQKLYLQSDED-----MQRSIE--------HKTLAELK 471
Query: 482 NEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQE 541
+ + I + ++CY AC L CN K+ G+ +C + N
Sbjct: 472 EIDPFVDKDEKYQCTATIIGIQERKTWCYQACKL------CNCKMIWDGSILKCKKENCP 525
Query: 542 IDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL 582
+ +Y+Y + D T + F++ G E++G A+ +
Sbjct: 526 CRQYEYKYKIPFIANDGTASLELVLFEKKGTELIGRTAETM 566
>gi|357493169|ref|XP_003616873.1| hypothetical protein MTR_5g085220 [Medicago truncatula]
gi|355518208|gb|AES99831.1| hypothetical protein MTR_5g085220 [Medicago truncatula]
Length = 286
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 32/253 (12%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVD 268
I+ ++P + W + RV + Y N + FS DL +D G I + ++
Sbjct: 8 ISNVSPRKQSWTLVVRVVPAWFGKDYKNKKLS---FSMDLVLIDRKGDRIGASIRRILIY 64
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
+F E ++ G V+ IS + ++ +NE+++ + V L + +P +SF
Sbjct: 65 KFKEQLQEGMVFTISSFIVASNSGSYRPSRNEYKLNFTINTKVKL--SKTVLVPTNVYSF 122
Query: 329 RHISEI--ESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLW 386
++ ES +NN +VDVIG++I V G+E + + S + TL+
Sbjct: 123 TPAPDVFNESYDNNCLVDVIGVMIGV----------GVERE-----YERDSTYCFKCTLF 167
Query: 387 GDFCNKEGQKLQ--EMVDVGFFPVLSVKSGKVNDFSGKSI--GTIPSTQLFINPDFAEAH 442
G++ L E +V V+++ KV F GK ST++ N E
Sbjct: 168 GEYVEDMNSFLSSGESQNV----VVAIMLTKVKLFQGKPTLQNAFSSTRITFNSKIGETK 223
Query: 443 ELREWFDSGGKNA 455
ELR+ F S N+
Sbjct: 224 ELRKSFLSANTNS 236
>gi|413922380|gb|AFW62312.1| hypothetical protein ZEAMMB73_585961 [Zea mays]
Length = 482
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 92/194 (47%), Gaps = 16/194 (8%)
Query: 274 IEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISE 333
++ ++ ++ K + A+ +F + ++ I L + ++ E+ PK F E
Sbjct: 17 LQESKILIMRKIYVDNAKLSFKPVHGKYMIRLHPKTLLEEVNEDPQDFPKYTFHLTPFPE 76
Query: 334 IESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG---- 387
+ E N+ +DVIG + +++ + P +G+ +R+++L D G +E++LWG
Sbjct: 77 LPQLEGNNEYFIDVIGCITALSDATPFQTSSGIVRMKRLIHLVDLRGNKIEVSLWGRRAE 136
Query: 388 DFCNKEGQKLQEMVDV-GFFPVLSVKS--GKVNDFSGKSIGTIPSTQLFINPDFAEAHEL 444
+F ++ K EM V F SVKS G SG + + + +IN E HE+
Sbjct: 137 EFPGQQVFKASEMNHVIVIFVGTSVKSYRGSPPFLSGTA-----ACRWYIN--LPEIHEI 189
Query: 445 REWFDSGGKNAATV 458
++ S G+ ++
Sbjct: 190 NTFYASIGEQYQSI 203
>gi|440799699|gb|ELR20743.1| leucine rich repeat-containing protein [Acanthamoeba castellanii str.
Neff]
Length = 1419
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 26/145 (17%)
Query: 493 WVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQ-----------------SGNRWQC 535
+ +V + I++ Y ACP +C+KKV + RW C
Sbjct: 1242 YASVVCTVNEIRTSGMWYPACPW----PKCHKKVEEYHGGDEGYDGEEEGQQHHQKRWYC 1297
Query: 536 DRCNQEIDECDY--RYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDV 593
CN+ + Y RY+ +I D TG W+ AF E+ +LG A+EL LK D+
Sbjct: 1298 KTCNR-VYAGRYVNRYMASLRIVDHTGDLWLRAFDEAAAPLLGTSAQELSQLKD--FDET 1354
Query: 594 RFGEIIRSRVFNQYLFRLKIKEELY 618
F + ++ ++ R+K+ +E Y
Sbjct: 1355 LFVDKVKEAQLQRHEMRVKVVQETY 1379
>gi|358343841|ref|XP_003636004.1| Replication protein A1-like protein [Medicago truncatula]
gi|355501939|gb|AES83142.1| Replication protein A1-like protein [Medicago truncatula]
Length = 540
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 22/247 (8%)
Query: 210 PIAAL---NPYQGRWAIKARVTAKGDLRRYNNARGDG-KVFSFDLLDSDGGEIRVTCFNA 265
P+A L N + W + +VT K + + DG + ++D+ G +I+V A
Sbjct: 4 PVAFLRDINEKKDFWKVAVKVTDKWSVVK------DGMEHMEMVIVDAKGTDIQVIIPTA 57
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI-FLEATSTVDLCTEEDDSIPKQ 324
+ ++I+V Y +S + P F N++++ + T+ VD + IP
Sbjct: 58 YRAEYEKLIKVNSTYTLSNFQVFPNDLVFKASDNKYKLKWTGGTTAVDANVHD---IPLP 114
Query: 325 QFSFRHISEIESAE--NNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVE 382
F+ ++EI + + + +V VIG V + ++ G + Q L +KD S S+
Sbjct: 115 NMKFKPLAEIIAGKWRADLLVHVIGYVHEIG-YCQVMAGTGKKLQVNFL-MKDLSDISLN 172
Query: 383 LTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVND---FSGKSIGTIPSTQLFINPDFA 439
TLW D+ K + E + G V+ +K GK+ + + T +T+L IN D A
Sbjct: 173 CTLWEDYAAKFIKFNNENKETGPIIVM-LKYGKIKEEGKYPLSVTNTYSATKLLINEDIA 231
Query: 440 EAHELRE 446
E RE
Sbjct: 232 EIKRFRE 238
>gi|340053079|emb|CCC47365.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 578
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 104/239 (43%), Gaps = 29/239 (12%)
Query: 159 FSTPNSGTFRAPNAGSIVRSFQPTVQPPYQPPPNFRNHGPILKNEAPARIIPIAALNPYQ 218
FS + R P+A V +F+PT + P+L I I P
Sbjct: 134 FSLSSRALVRHPDATIRVLAFKPTET----------DGCPMLGIR---HIFSIKGRTPED 180
Query: 219 GRWAIKARVTAKGDLRRYNNAR-GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVG 277
+ R+ KG LR+++ D VF LDS+G I CF + FY++ + G
Sbjct: 181 S--VVCLRMIWKGKLRKFSTGHSADRFVFGCVALDSEGDAILTECFGSA--PFYDMFDAG 236
Query: 278 RVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE-EDDSIPKQQ-FSFRHISEIE 335
++ SL K + ++ + E STV E ++D+ P F F + +
Sbjct: 237 ECVQVTNVSLAHHDKPGHGVRLQIS---EQISTVKRSAEYQNDNFPLHPCFMFGSKAVGD 293
Query: 336 SA---ENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRS--VELTLWGDF 389
+A E IV V GIV +V PS ++ + G Q ++L L+D + S +E+ LWGD
Sbjct: 294 AAGYVEVGDIVSVEGIVAAVFPSALVVTRRGRVEQSKLL-LQDYTSPSATLEVVLWGDM 351
>gi|57222455|gb|AAS01985.2| expressed protein, with alternative splicing isoforms [Oryza sativa
Japonica Group]
Length = 420
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 119/298 (39%), Gaps = 36/298 (12%)
Query: 342 IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGR-SVELTLWGDFCNK-EGQKLQE 399
I D IGI+ ++ P + M + +LN T+GR +V + LWG + + LQ+
Sbjct: 43 ISDAIGIMTAIGPVQTVSYAGVM---KAVLNDHITNGRETVVVALWGPHATQFHAENLQQ 99
Query: 400 MVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVS 459
D G +L V G F + + ST P+ A E S N V
Sbjct: 100 QADNGHVVMLFV--GLTVKFRDRQLALQGSTVCRWYPN-APIQETISLISSLHGNPQVV- 155
Query: 460 ISREIAAG-GAKNEIHKTVSQI----KNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACP 514
R I A G K I+ VS I +E LG S +V + ++ + Y AC
Sbjct: 156 --RMIEANFGQKEAINVKVSDICDLNPHEALGNS----YVVNIIIRDLVPAEPWWYIAC- 208
Query: 515 LMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQA-----QIQDQTGLTWVTAFQE 569
+ + GN ++C RC+ + E YR ++ DQ T F E
Sbjct: 209 -----STYKRGTAREGNAYKCPRCSTDAIETRYRVVIMGIDPSDLANDQAKAAEFTFFGE 263
Query: 570 SGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDEQRVKIT 627
GE+++G P L + +D V I++ QY+ R + G QR +++
Sbjct: 264 IGEQLIGRPVLNLVASVHGARDIVP--PEIKAIFGRQYVIRTSVSR---GSLQRNRVS 316
>gi|62733874|gb|AAX95983.1| hypothetical protein LOC_Os11g13920 [Oryza sativa Japonica Group]
gi|77549546|gb|ABA92343.1| AT hook motif-containing protein, putative [Oryza sativa Japonica
Group]
Length = 2157
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 139/356 (39%), Gaps = 64/356 (17%)
Query: 223 IKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
I ARV+ D N G G +F DL LD G I + +D +++ +VY
Sbjct: 1596 ILARVSRLWDFCDLN---GSGNIFHTDLVLLDQMGNSIHAQIYPPAIDSLRPLLKEQKVY 1652
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENN 340
I ++ ++W F E E P FS S+I + +
Sbjct: 1653 YIDSFTV-----------SKWTTFEEYI-------EPAADFPGITFSLTPFSDIPNLVDK 1694
Query: 341 SIV---------DVIGIVISV-NPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD-- 388
+I DV+G++ V +P+V + ++ +R + + D S ++ +TLWG+
Sbjct: 1695 TIFYVGLYGMQPDVMGVITEVGSPTVVRPKSRNADSLKRTIQICDASNSTMPVTLWGERA 1754
Query: 389 -------FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPST--QLFINPDFA 439
N + Q +V VG V D++G + S+ + ++N D
Sbjct: 1755 DAFDANSVYNAGQTQAQVIVFVGTL---------VKDYTGLGLTVTGSSPCKWYLNLDIP 1805
Query: 440 EAHELREWFDSGGKNAATVSISREIAAGGAKNEI-HKTVSQIKNEGLGRSEKPDWVTVRA 498
E EL+E F + N VS A G ++ KT+ +I ++ ++
Sbjct: 1806 EVLELKESFSA---NFRPVSWVDNPATGYNQDTAEEKTIQEILALNPHKNRSTRFIVNVT 1862
Query: 499 FITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRC-NQEIDECDYRYLLQA 553
+S+ Y +C R C + G+ ++C C N I + Y+ +L A
Sbjct: 1863 VRRICSENSWWYNSC------RLCYRTSKPYGSSYKCSSCSNIGIPDPRYKVVLIA 1912
>gi|218198314|gb|EEC80741.1| hypothetical protein OsI_23219 [Oryza sativa Indica Group]
Length = 667
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 125/292 (42%), Gaps = 33/292 (11%)
Query: 337 AENNSIVDVIGIVISVNP-SVPILRKNGMETQRRILNLKDTSGR-----SVELTLWGDFC 390
AE +DVIG++ + P +L KN ++ R+ N+++ V++TLWGD
Sbjct: 48 AETCLYLDVIGLLSGMKPIEQRMLGKNT--SRERVCNMREIELLLLEGEKVKITLWGDI- 104
Query: 391 NKEGQKLQEMVD---VGFFPVLSVKSGKVNDFSGK-SIGTIPSTQLFINPDFAEAHELRE 446
L MVD +G V V ++ S G ST++F++ + + E+
Sbjct: 105 ------LANMVDDDLLGKQTVFIATGLLVKEYEKLLSFGVTSSTEVFLDMEIPASMEILS 158
Query: 447 WFDSGGKNAATVSISREIAAGGAKNEI----HKTVSQIKNEGLGRSEKPDWV-TVRAFIT 501
++ + I + + G E KT+ +I ++ +++ TV+A I
Sbjct: 159 RHNA--EKVLPTMIEVDASTQGTIEEQMFYNRKTLKEITELRYSNIQQKEFICTVKAKIE 216
Query: 502 FIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGL 561
IKS ++ Y +C +C + N + C+ C +E RY++ +I D T
Sbjct: 217 EIKSRNWWYMSCD------KCFCGTRKESNVYICNSCGKEAVNPKPRYVINLEISDHTTR 270
Query: 562 TWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKI 613
T T F E E I G + + + Q D+ + IR +FRLK+
Sbjct: 271 TTCTIFNEEAERIFGHKSVSTMLEEQNGQIDM-IPDTIRQICGRILIFRLKL 321
>gi|89257630|gb|ABD65118.1| hypothetical protein 31.t00031 [Brassica oleracea]
Length = 467
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 127/322 (39%), Gaps = 33/322 (10%)
Query: 341 SIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEM 400
++ DVIG ++ + V I+ NG +T++ + L++ + + + LWG F +Q
Sbjct: 81 ALKDVIGQIVEYS-HVEIVSVNGKDTEKITVELRNENDVRLTIVLWGKFAMNVSDAIQLR 139
Query: 401 VDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSI 460
D VL KV + + INP E G A V
Sbjct: 140 ADHAVVCVLRFGKIKVWKEDRSVSNAYNVSDIAINPSMNEVQAFLALLPKDGLPLAIVE- 198
Query: 461 SREIAAGGAKNE-----IH---KTVSQIKNEGLGRSEKPDWVTVRAFITFIKSD-SFCYT 511
++ + +E IH KT+S++ S + + V I I+SD + Y
Sbjct: 199 AKALPMVSMISEKEDFFIHTPRKTISEVL-----ESRQTERCIVMCTIAAIESDMGWFYL 253
Query: 512 ACPLMIGDRQCNKKVT-------QSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWV 564
+C + C+KKV G ++ C +C + RY L + D T T
Sbjct: 254 SC------KVCSKKVQTVPNDNDDGGFKYFCTKCKVYTPKMLPRYKLHLVVLDNTSNTKF 307
Query: 565 TAFQESGEEILGCPAKELY-MLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELY---GD 620
F G ++L P EL + E+Q+ + + V YLF++ I++E Y D
Sbjct: 308 LLFDNLGLQLLNQPCIELTGKVTDEVQNPDALPIALTNLVGKTYLFKIVIEKENYLYXHD 367
Query: 621 EQRVKITVIRADQVNYSSESRY 642
+V + AD +N + Y
Sbjct: 368 TYKVLKIITNADMINEFDVNHY 389
>gi|66771039|gb|AAY54831.1| IP08052p [Drosophila melanogaster]
Length = 189
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
LLD + GEI F + Y I+ G VYLIS ++ A ++ N ++F A +
Sbjct: 3 LLD-ESGEITGLVFADYDNGLYGQIQTGLVYLISGFEVEKAISSYKVSDNPNQLFFCANT 61
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRR 369
++L D IP++++SF + ++ S + VD IGI V +L G R
Sbjct: 62 VLELSAC--DRIPREKYSFLPLLKVSSKRDQEPVDAIGICAEVG----MLENRGGCFIRE 115
Query: 370 ILNLKDTSGRSVELTLW-GDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIP 428
+L L D V L LW + N GQ+ +V G L K+N
Sbjct: 116 LL-LVDPDFHPVILNLWQKEAVNFVGQRDDVIVVKGARAQLHNNEMKLN--------ASW 166
Query: 429 STQLFINPDFAEAHELREWFDS 450
T + INPD +A + EW+++
Sbjct: 167 YTNMQINPDIPDATGMLEWYNN 188
>gi|414589506|tpg|DAA40077.1| TPA: hypothetical protein ZEAMMB73_356509 [Zea mays]
Length = 388
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 9/188 (4%)
Query: 205 PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGEIRVTC 262
P + + L+P I+ RV K + R A DG + +L+ D G I
Sbjct: 31 PEFVKTLKELHPQSTNAIIRVRVIRKWEFR---GATNDGPLQHINLVLADEQGTPIHAEI 87
Query: 263 FNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIP 322
A+ +IE+ +VY + + + P++ F + N + I + + + P
Sbjct: 88 AAALAVDKGSMIEIEKVYELKRFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQVFP 147
Query: 323 KQQFSFRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRS 380
+ + IE +N ++DV+G++ +NP P L T R + +K+TS S
Sbjct: 148 RYIYKLTCFENIEDNIDNRTYLIDVLGMLTQINP--PHLIGYNNSTIIRDIFIKNTSDMS 205
Query: 381 VELTLWGD 388
+++TLWG+
Sbjct: 206 LKITLWGN 213
>gi|108864598|gb|ABA94881.2| AT hook motif-containing protein, putative [Oryza sativa Japonica
Group]
Length = 2157
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 139/356 (39%), Gaps = 64/356 (17%)
Query: 223 IKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
I ARV+ D N G G +F DL LD G I + +D +++ +VY
Sbjct: 1596 ILARVSRLWDFCDLN---GSGNIFHTDLVLLDQMGNSIHAQIYPPAIDSLRPLLKEQKVY 1652
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENN 340
I ++ ++W F E E P FS S+I + +
Sbjct: 1653 YIDSFTV-----------SKWTTFEEYI-------EPAADFPGITFSLTPFSDIPNLVDK 1694
Query: 341 SIV---------DVIGIVISV-NPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD-- 388
+I DV+G++ V +P+V + ++ +R + + D S ++ +TLWG+
Sbjct: 1695 TIFYVGLYGMQPDVMGVITEVGSPTVVRPKSRNADSLKRTIQICDASNSTMPVTLWGERA 1754
Query: 389 -------FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPST--QLFINPDFA 439
N + Q +V VG V D++G + S+ + ++N D
Sbjct: 1755 DAFDANSVYNAGQTQAQVIVFVGTL---------VKDYTGLGLTVTGSSPCKWYLNLDIP 1805
Query: 440 EAHELREWFDSGGKNAATVSISREIAAGGAKNEI-HKTVSQIKNEGLGRSEKPDWVTVRA 498
E EL+E F + N +S A G ++ KT+ +I ++ ++
Sbjct: 1806 EVLELKESFSA---NFRPISWVDNPATGYNQDTAEEKTIQEILALNPHKNRSTRFIVNVT 1862
Query: 499 FITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRC-NQEIDECDYRYLLQA 553
+S+ Y +C R C + G+ ++C C N I + Y+ +L A
Sbjct: 1863 VRRICSENSWWYNSC------RLCYRTSKPYGSSYKCSSCSNIGIPDPRYKVVLIA 1912
>gi|413934866|gb|AFW69417.1| hypothetical protein ZEAMMB73_473384 [Zea mays]
Length = 317
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 102/247 (41%), Gaps = 28/247 (11%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNAVV 267
PIA L+P AI+ R+ K + R A DG + +L+ D G I A+V
Sbjct: 5 PIAELDPKSTNAAIRVRIIRKWEFR---GATNDGPLRHVNLILADEQGTAIHAEIQAALV 61
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
+I++ +VY + + + P++ + + N I + L + + P+ +
Sbjct: 62 ADKGSLIQIDKVYELKRFRVAPSRNYYKPVDNSMMIQFTLYTQAKLVQDPPPTFPRYAYK 121
Query: 328 FRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
I + +N ++DV+GI+ + S+ + N R I LKD + S ++TL
Sbjct: 122 LTSFENIGNNVDNKTYLIDVLGILTEIG-SLHHVGYNNSNIIRDIF-LKDINNTSTKVTL 179
Query: 386 WG---------DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS-IGTIPSTQLFIN 435
WG + C++ K ++ VG F G++ + + + N
Sbjct: 180 WGHQASSFSVDNNCDENDNKPVVVLFVGCL---------AKRFKGEAYLSATAACTWYFN 230
Query: 436 PDFAEAH 442
PD EA
Sbjct: 231 PDIPEAQ 237
>gi|38424033|dbj|BAD01693.1| DNA binding protein-like [Oryza sativa Japonica Group]
gi|38637631|dbj|BAD03911.1| DNA binding protein-like [Oryza sativa Japonica Group]
Length = 445
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 102/244 (41%), Gaps = 35/244 (14%)
Query: 223 IKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
I ARV+ D N G G +F DL LD G I + +D +++ +VY
Sbjct: 18 ILARVSRLWDFCDLN---GSGNIFHTDLVLLDQMGNSIHAQIYPPAIDSLRPLLKEQKVY 74
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENN 340
I +++ A + + + N I +T + E P FS S+I + +
Sbjct: 75 YIDSFTVRYANRTYRPVDNSLMIVFSKWTTFEEYIEPAADFPGITFSLTPFSDIPNLVDK 134
Query: 341 SI--VDVIGIVISV-NPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQ-K 396
+I VDV+G++ V +P+V + ++ +R + + D S GQ +
Sbjct: 135 TIFYVDVMGVITEVGSPTVVRPKSRNADSLKRTIQICDASA---------------GQTQ 179
Query: 397 LQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPST--QLFINPDFAEAHELREWFDSGGKN 454
Q +V VG V D++G + S+ + ++N D E EL+E F + +
Sbjct: 180 AQVIVFVGTL---------VKDYTGLGLTVTGSSPCKWYLNLDIPEVLELKESFSANFRP 230
Query: 455 AATV 458
+ V
Sbjct: 231 VSWV 234
>gi|348687513|gb|EGZ27327.1| hypothetical protein PHYSODRAFT_376071 [Phytophthora sojae]
Length = 68
Score = 54.3 bits (129), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 221 WAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
WA RV ++ +R Y N RG G++ + D+ G IR+T FN V FY+++ G
Sbjct: 1 WAFVCRVLSRSPIREYTNLRGGGRLIEIYVGDAAGDTIRITLFNEAVTAFYDVVSPGSTC 60
Query: 281 LISKGSLK 288
S G +K
Sbjct: 61 YFSAGRIK 68
>gi|194764877|ref|XP_001964554.1| GF19997 [Drosophila ananassae]
gi|190614826|gb|EDV30350.1| GF19997 [Drosophila ananassae]
Length = 265
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 23/243 (9%)
Query: 215 NPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEII 274
+P+ I ARV K ++ Y N G +F L D + GEI T N + + F++ I
Sbjct: 34 HPWDSTSFIIARVVHKTEITSYENETS-GNIFLIYLRD-ESGEIIATVHNELCNTFFKQI 91
Query: 275 EVGRVYLISKGSLKPAQKNFNHLKNEWEI-FLEATSTVDLCTEEDD--SIPKQQFSFRHI 331
E +V + + A K + + + + I F ++T + + + + +IP +++ + I
Sbjct: 92 ETDQVCFFADFEVNWATKKYVLMPHSFNINFTQSTKVLPIGSLNQNITAIPGIRYNLQPI 151
Query: 332 SEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRI--LNLKDTSGRSVELTLWGDF 389
I + VD IGI V+ L K G R I ++ D G + L LW D
Sbjct: 152 EVIHKMCDGEPVDTIGICGKVDE----LAKRGGYYIREIELMDYDDYDG-VITLNLWNDA 206
Query: 390 C-NKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS-IGTIPSTQLFINPDFAEAHELREW 447
N +G++ ++ VK +V + + K+ I +++ INP+ EA LREW
Sbjct: 207 AINFDGKEDD---------IILVKGARVREHNLKNKINFDWFSKMEINPNIKEAKSLREW 257
Query: 448 FDS 450
++
Sbjct: 258 LEN 260
>gi|356995354|emb|CCD35049.1| replication protein A1, partial [Apatura iris xanthina]
Length = 76
Score = 53.9 bits (128), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 476 TVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKK-VTQSGNRWQ 534
T S+ LG +K D+ ++ +TF +D+ Y ACP QCNKK V Q +++
Sbjct: 4 TFSEADERKLGSGDKGDFFSLLGVLTFTFADNVVYKACP----QEQCNKKLVDQENGQFR 59
Query: 535 CDRCNQEIDECDYRYLL 551
C++CN+E YR LL
Sbjct: 60 CEKCNREYPNFKYRLLL 76
>gi|413948244|gb|AFW80893.1| hypothetical protein ZEAMMB73_324862 [Zea mays]
Length = 455
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNAVV 267
PI LNP + I+ RV K + R A DG + +L+ D G I A+
Sbjct: 5 PITELNPQKINVVIRVRVIRKWEFR---GATNDGPLRHINLILADEQGTAIHAEIPAALA 61
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
+I++ +VY I + P++ F + N I + + + P ++
Sbjct: 62 TEKGSLIQIDKVYEIRHFRVMPSRGYFKPVHNNLMIQFTLYTQAKVVNDPPHIFPIYIYN 121
Query: 328 FRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
++E +N ++DVIG++ + P + + R + +KD S S+++TL
Sbjct: 122 LTSFQKVEENVDNRNYLIDVIGMLTQI--GAPHVAGYNNSSIVRDIFIKDISDASLKITL 179
Query: 386 WGD---------FCNKEGQKLQEMVDVG 404
WGD CN+ K ++ VG
Sbjct: 180 WGDQASGFSIDNVCNESNNKPIVIMFVG 207
>gi|413937763|gb|AFW72314.1| hypothetical protein ZEAMMB73_397324 [Zea mays]
Length = 564
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 151/382 (39%), Gaps = 43/382 (11%)
Query: 214 LNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSD--GGEIRVTCFNAVVDRFY 271
L Y+ I+ V+ K ++ A G + D++ SD G I + +
Sbjct: 9 LTTYKKHAIIQVHVSRKWS---FHGATEKGPLQHIDMVLSDCKGNSIYAEIPANLAEEKG 65
Query: 272 EIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHI 331
+IE ++Y IS+ + A+ + + + I + + + + P +
Sbjct: 66 ALIETNQIYDISRFRVTAAKTAYKPIDGDKMIQFTTYTIIKPASNPPPTFPLYIYQLTPF 125
Query: 332 SEIESA--ENNSIVDVIGIVISVNPSVPILRKNGM--ETQRRILNLKDTSGRSVELTLWG 387
EIES +DV+G + + ++ I+ G T R + ++D S +++++TLW
Sbjct: 126 DEIESQIQHKTKFLDVLGTITEIT-ALKIVHIEGQLSPTIIRDVMIEDLSRKTLKITLWA 184
Query: 388 DFCNKEGQKLQEMVD-VGFFPVLSVKSGKVNDF-SGKSIGTIPSTQLFINPDFAEAHELR 445
+Q++ D V P+L++ G + F G + + + NP EA +
Sbjct: 185 K--RATSFTIQDVYDPVSKKPILALFVGCLPKFYKGVYLSGGAACHWYFNPTIPEAEAYQ 242
Query: 446 EWFDSGGKNAATVSISREIAAGGAKNEI------HKTVSQIKNEGLGRSEKPDW-----V 494
GG+ T+ + A HKT+ Q+ + + PD V
Sbjct: 243 N--RRGGE---TIQLHLPTQPKHALQTFQPPTIEHKTLEQLLT--MNPYDYPDTGYECTV 295
Query: 495 TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQ 554
T+ T S+++ Y +C +C +K T + CD C + D ++Y L+ +
Sbjct: 296 TITEIDT---SNTWWYPSC------TKCGRKTTPHNTAYYCDWC--KWDGYKFKYKLKFR 344
Query: 555 IQDQTGLTWVTAFQESGEEILG 576
D T + + F I+G
Sbjct: 345 ASDATAMAQMFCFDNIARYIVG 366
>gi|333988515|ref|YP_004521122.1| Replication factor-A domain-containing protein [Methanobacterium
sp. SWAN-1]
gi|333826659|gb|AEG19321.1| Replication factor-A domain protein [Methanobacterium sp. SWAN-1]
Length = 798
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 508 FCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAF 567
Y CP CNK+VT S N + CD C +EI+ +Y ++ ++D TG T F
Sbjct: 678 ILYEMCP------NCNKRVTFSDNAYICDICGEEIENPNYLMIISCVVEDDTGTMRTTFF 731
Query: 568 QESGEEILGCPAKEL 582
+ + EE++G E+
Sbjct: 732 RTAAEELIGMNTDEV 746
>gi|242093306|ref|XP_002437143.1| hypothetical protein SORBIDRAFT_10g021935 [Sorghum bicolor]
gi|241915366|gb|EER88510.1| hypothetical protein SORBIDRAFT_10g021935 [Sorghum bicolor]
Length = 400
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 128/330 (38%), Gaps = 34/330 (10%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
L D+ G + ++ ++EV Y+ISK + PA+ + I +
Sbjct: 27 LADARGDAMYAEIPQEIIHTLDPLLEVDNTYVISKFRVNPAKACYKPFSGHLMIEFTEFT 86
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQ 367
++ L + PK ++ +I A+ + D++G + + + K T
Sbjct: 87 SIKLSENVPPTFPKYIYALTSFDKIVPAQGPVPILTDILGYITKYTSATSVTPKGKERTS 146
Query: 368 -RRILNLKDTSGRSVELTLWGDFC---------NKEGQKLQEMVDVGFFP--VLSVKSGK 415
R + +KD S +++TLWGD N+E K + VGF P S +
Sbjct: 147 ILREIFVKDMSDNELKITLWGDHAINFTIDHLNNQENPKAVIALFVGFIPRKWHSHYAEH 206
Query: 416 VNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISRE-IAAGGAKNEI- 473
SG S + ++NPD EA + F S + I+A +
Sbjct: 207 KPYLSGSS-----GSNYYLNPDIQEALPFYKRFKDEPMYIERPPPSEDNISAQPQDTPLA 261
Query: 474 HKTVSQIKNEGLGRSEKPD-WVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKKV-TQSG 530
KTV+++ + E PD +T I + S+ Y +C + C KK+ Q+
Sbjct: 262 EKTVAELN--AIDPYEFPDEGYKCTVTVTHIPDNISWWYMSC------KPCKKKMDPQAA 313
Query: 531 NRWQCDRCNQEIDECDYRYLLQAQIQDQTG 560
++C +C RYLL +D+T
Sbjct: 314 GGYRCPKCYGT--NALPRYLLNFFAEDETA 341
>gi|414883616|tpg|DAA59630.1| TPA: hypothetical protein ZEAMMB73_011121 [Zea mays]
Length = 289
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 42/255 (16%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNAVV 267
PI L+P I+ RV K + R A DG + +L+ D G I A+
Sbjct: 5 PITELDPRNINVVIRVRVIRKWEFR---GATNDGPLRHINLILADEQGTAIHAEIPAALA 61
Query: 268 DRFYEIIEVGRVYLI-------SKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDS 320
+I++ +VY I S+ KP Q N+L ++ ++++A + +
Sbjct: 62 TEKGSLIQIEKVYEIRRFRVVSSRSYFKPVQ---NNLMIQFTLYIQA----KVVKDPPHI 114
Query: 321 IPKQQFSFRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSG 378
P ++ +IE + +N ++D IG++ + P + + R + +K+ S
Sbjct: 115 FPIYIYNLTSFEKIEESVDNKNYLIDAIGMLTQI--GAPHVAGYNNSSIVRDIFIKNISD 172
Query: 379 RSVELTLWGD---------FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS-IGTIP 428
S+++TLWGD CN+ K + + FF L+ F G+S +
Sbjct: 173 ASLKITLWGDQASGFSTDNVCNQGNNK---PIVIMFFGCLA------KQFKGQSYLSGTA 223
Query: 429 STQLFINPDFAEAHE 443
+T + NPD EA E
Sbjct: 224 ATTWYFNPDIPEAQE 238
>gi|308811889|ref|XP_003083252.1| ENSANGP00000015823 (ISS) [Ostreococcus tauri]
gi|116055131|emb|CAL57527.1| ENSANGP00000015823 (ISS) [Ostreococcus tauri]
Length = 97
Score = 53.5 bits (127), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 1 MPVNLTPNSISLINGGDVNS---KPLVQVMDIKLIGSTQ---ERYRFLISDSVSTQHAML 54
MP LTP++I+ + G V S KPLVQV D K I + + R+R L+SD A++
Sbjct: 1 MPPLLTPDAINNVLAGAVTSREVKPLVQVFDKKPIKTREGEPRRFRLLVSDGSFAGQALV 60
Query: 55 ATQLNDRVKTGQVKKGSVVQLIDYICSTVQNRKII 89
A +LND ++ K ++++L +Y V ++ +
Sbjct: 61 AGELNDMCAREEISKFTILRLDEYTVQVVNDKTCV 95
>gi|361069979|gb|AEW09301.1| Pinus taeda anonymous locus UMN_2879_01 genomic sequence
gi|383157669|gb|AFG61167.1| Pinus taeda anonymous locus UMN_2879_01 genomic sequence
gi|383157671|gb|AFG61168.1| Pinus taeda anonymous locus UMN_2879_01 genomic sequence
gi|383157673|gb|AFG61169.1| Pinus taeda anonymous locus UMN_2879_01 genomic sequence
gi|383157675|gb|AFG61170.1| Pinus taeda anonymous locus UMN_2879_01 genomic sequence
gi|383157677|gb|AFG61171.1| Pinus taeda anonymous locus UMN_2879_01 genomic sequence
gi|383157679|gb|AFG61172.1| Pinus taeda anonymous locus UMN_2879_01 genomic sequence
gi|383157681|gb|AFG61173.1| Pinus taeda anonymous locus UMN_2879_01 genomic sequence
gi|383157683|gb|AFG61174.1| Pinus taeda anonymous locus UMN_2879_01 genomic sequence
Length = 94
Score = 53.5 bits (127), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 409 LSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAG- 467
++V++ KV+D+SG S+ T + L INPD A +LR W+D+ GK ++ ++ + +G
Sbjct: 1 IAVRAAKVSDYSGVSLSTTGRSTLMINPDLPVAQKLRSWYDTDGKGSSMAPVASTLPSGT 60
Query: 468 ---GAKNEIHKT--VSQIKNEGLGRSEKPDWVTVR 497
G+++ + +SQI +G KP + VR
Sbjct: 61 PRAGSRSLYSERAFLSQIVEPSVGEG-KPAYFNVR 94
>gi|297790618|ref|XP_002863194.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309028|gb|EFH39453.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 508
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 91/442 (20%), Positives = 173/442 (39%), Gaps = 68/442 (15%)
Query: 214 LNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEI 273
LNP + W ++ +V RR N+ G+ F L D +G +I+ + + V D+F +
Sbjct: 13 LNPSKYEWVVETKVLCSWT-RRLENS---GRRLEFVLADREGNKIQCSLWGEVYDKFVSV 68
Query: 274 IEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISE 333
I G + I + + + +++ L +T+ D++ Q F F
Sbjct: 69 IVSGSWFRIKDFKVVHQTGDCRATLHRYKMILLKNTTIVKIPGIDNN---QFFDFVDFGS 125
Query: 334 I--ESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCN 391
I ++ +V+VIG +++V P + ++ G T + + L+D + TLW DF
Sbjct: 126 ILDRRYSDDFLVNVIGQIVNVGP-IEDIKIRGKSTPKLDVELRDRGNVRLICTLWADFA- 183
Query: 392 KEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI--GTIPSTQLFINPDFAEAHELREWFD 449
K+ + E V ++ +V ++ G + +T++ ++P E R
Sbjct: 184 KQVKVYTEANPAAV--VCVIRCAQVKEWKGNWTISNAMGATRVLLDPPGVFVDEFRSGLP 241
Query: 450 SGGK-----------NAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRA 498
+ G +TVSI + K + V ++ EG+ V +
Sbjct: 242 TDGVVLTNHDNSELFAGSTVSIRDQFLVKNHKRTVRDIVEALE-EGMC-------VAMVI 293
Query: 499 FITFIKSDSFCYTACPLMIGDRQCNKKV----TQSGNR-----WQCDRCNQEIDE----- 544
+ ++ + Y +C + CNK V SG+ + C C++++
Sbjct: 294 VGSVERTSKWYYVSC------KMCNKSVEPYPENSGDDGKPPLYYCGVCDKDVSAVVFSF 347
Query: 545 -------CD-----YRYLLQAQIQDQTGL-TWVTAFQESGEEILGCPAKELYMLKYELQD 591
C +RY L ++ D T F G +L A+ELY E
Sbjct: 348 RARLFIICSGITVCFRYRLVLEVSDATNYKARFLLFDAMGSTLLRRTAQELYNAVSENDP 407
Query: 592 DVRFGEIIRSRVFNQYLFRLKI 613
+ E I + V ++LF++ I
Sbjct: 408 SILPSE-IGALVGRRFLFKVSI 428
>gi|115436702|ref|NP_001043109.1| Os01g0390300 [Oryza sativa Japonica Group]
gi|55297220|dbj|BAD68984.1| DNA binding protein-like [Oryza sativa Japonica Group]
gi|113532640|dbj|BAF05023.1| Os01g0390300 [Oryza sativa Japonica Group]
gi|215736912|dbj|BAG95841.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767124|dbj|BAG99352.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 185
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 223 IKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
IKARV+ + D Y++ + K++ DL LD G I V + + + +++ G+VY
Sbjct: 18 IKARVSRQWD---YHDLNDETKIYHTDLVLLDEKGNSIHVQIYPPAMIKLRTLLQEGKVY 74
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESA--E 338
S++ A + + + N I +T++ C + D P FS + S
Sbjct: 75 YFDSFSVRYANRTYRPVTNPLMISFTKWTTLEECIDAFDDFPAITFSLTPFQDAPSLVDR 134
Query: 339 NNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSG 378
N VD++G++ + + + K+ ET +R + + D S
Sbjct: 135 NAFYVDIMGVITEIGATDTLRPKSRNTETLKRTMQIWDASN 175
>gi|357519361|ref|XP_003629969.1| Replication factor A protein [Medicago truncatula]
gi|355523991|gb|AET04445.1| Replication factor A protein [Medicago truncatula]
Length = 296
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 114/240 (47%), Gaps = 11/240 (4%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
I+ ++P + W + RV + Y N + + F L+D G +I + ++ +F
Sbjct: 8 ISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSM-EFVLIDRKGDQIGASIRRTLIYKF 66
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRH 330
E ++ G V+ IS + ++ NE+++ + V L + +P +SF
Sbjct: 67 KEQLQEGMVFTISSFDVASNSGSYRPSHNEYKLNFTINTKVKLS--KTILVPINVYSFTP 124
Query: 331 ISEI--ESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD 388
++ ES +NN +VDVIG++I V R+ G +T+ ++ L D++G + TL+G+
Sbjct: 125 APDVFNESYDNNYLVDVIGVIIGVGVEREYERE-GTKTKMNVIEL-DSNGYRFKCTLFGE 182
Query: 389 FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI--GTIPSTQLFINPDFAEAHELRE 446
+ + L D V+++ KV F GK + ST++ NP+ E ELR+
Sbjct: 183 YVEELNSLLSS--DESQNVVVAIMLTKVKLFQGKPALQNALSSTRITFNPEIGETKELRK 240
>gi|57899579|dbj|BAD87158.1| DNA binding protein-like [Oryza sativa Japonica Group]
gi|57899664|dbj|BAD87333.1| DNA binding protein-like [Oryza sativa Japonica Group]
Length = 1083
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 233 LRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPA 290
L + + + K++ DL+ D GG I F ++ F ++ G+VY + +K +
Sbjct: 538 LWEFTDCKDATKIYHIDLVLVDEKGGSIHAQIFPLLLQVFKPLLTEGKVYYLDSYRVKTS 597
Query: 291 QKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIES--AENNSIVDVIGI 348
K++ + N + ++V+ C + + P +S ++E+ + +N S VDVIG+
Sbjct: 598 NKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYSLTPLNEVSNFVDKNESFVDVIGV 657
Query: 349 VISVN-PSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD 388
+ ++ P++ + + +R + + + ++ ++LW +
Sbjct: 658 ITEISTPTMLRPKSRDASSLKRTVQICYANNSTLNVSLWAE 698
>gi|408381003|ref|ZP_11178553.1| Replication factor-A domain-containing protein [Methanobacterium
formicicum DSM 3637]
gi|407816268|gb|EKF86830.1| Replication factor-A domain-containing protein [Methanobacterium
formicicum DSM 3637]
Length = 791
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 102/251 (40%), Gaps = 49/251 (19%)
Query: 335 ESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCN--- 391
E E + V + G V+SV + +G R + + D SG V ++LW D N
Sbjct: 533 ELVEGDRDVSLFGRVLSVAEPTQFTKSDGSTGIVRSMEIADDSG-VVRVSLWDDQANTSF 591
Query: 392 KEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSG 451
KEG+ ++ +++ +VN + ++ T + P+ EA
Sbjct: 592 KEGEAVK------------IENPRVNLRNNNIELSVGRTTIITKPEEDEA---------- 629
Query: 452 GKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDW-VTVRAFITFIKSDSFCY 510
+ + +EI + KN +G E+ D + V + I+ +
Sbjct: 630 --------------SVPSLDEIEGKLYPSKN--IGDIEEGDQSIKVSGEVVDIRGSKILF 673
Query: 511 TACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQES 570
CP CNK+V N + CD C +EI + + ++ ++D TG +T F+++
Sbjct: 674 EMCP------NCNKRVNWVDNAYICDICGEEIKKPNMLMIISLMLEDDTGTISITFFRKA 727
Query: 571 GEEILGCPAKE 581
EE+LG E
Sbjct: 728 AEEVLGMTTAE 738
>gi|348666728|gb|EGZ06555.1| hypothetical protein PHYSODRAFT_380579 [Phytophthora sojae]
Length = 68
Score = 52.4 bits (124), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 221 WAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
W+ R+ A+ +R + + R G++F D DG +RVT FN +RF++++ G V
Sbjct: 1 WSFIGRILARSPVRTFKSWRASGRLFRAHFTDRDGATLRVTVFNEGAERFFDVLSPGAVC 60
Query: 281 LISKGSLK 288
S G +K
Sbjct: 61 SFSNGRIK 68
>gi|413933977|gb|AFW68528.1| hypothetical protein ZEAMMB73_247337 [Zea mays]
Length = 507
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 152/381 (39%), Gaps = 41/381 (10%)
Query: 214 LNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSD--GGEIRVTCFNAVVDRFY 271
L Y+ I+ V+ K ++ A +G + D++ SD G I + +
Sbjct: 15 LTAYKKHAIIQVHVSRKWS---FHGATENGPLQHIDMVLSDCKGNSIYAEIPANLAEEKG 71
Query: 272 EIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHI 331
+IE ++Y IS+ + A+ + + + I + + + + P +
Sbjct: 72 VLIETNQIYDISRFRVTAAKTAYKPIDGDKMIQFTTYTIIKPASNPPPTFPLYIYRLTPF 131
Query: 332 SEIESA--ENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILNLKDTSGRSVELTLWGD 388
EIES +DV+G + V + + + T R + ++D S +++++TLW
Sbjct: 132 DEIESQIQHKTKFLDVLGTITEVTALKTVHIQGQLSPTIIRDVMIEDLSRKTLKITLWAK 191
Query: 389 FCNKEGQKLQEMVD-VGFFPVLSVKSGKVNDF-SGKSIGTIPSTQLFINPDF--AEAHEL 444
+Q++ D V P+L++ G + F G + + + NP AEA++
Sbjct: 192 --RATSFTIQDVYDPVSKKPILALFVGCLPKFYKGVYLSGGAACHWYFNPTIPEAEAYQN 249
Query: 445 REWFDSGGKNAATVSISREIAAGGAKNEI------HKTVSQIKNEGLGRSEKPDWVTVRA 498
R GG+ T+ + A HKT+ Q+ + + PD
Sbjct: 250 RR----GGE---TIQLHLPTQPKHALQTFQPPTIEHKTLEQLLT--MNPYDYPD-TGYEC 299
Query: 499 FITFIK---SDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQI 555
+T K S+++ Y +C +C +K T + CD C + D ++Y L+ +
Sbjct: 300 TVTITKIDTSNTWWYPSC------TKCGRKTTPHNTTYYCDWC--KWDGYKFKYKLKFRA 351
Query: 556 QDQTGLTWVTAFQESGEEILG 576
D T + + F I+G
Sbjct: 352 SDATAMAQMFCFDNIARYIVG 372
>gi|297825951|ref|XP_002880858.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297326697|gb|EFH57117.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 395
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 533 WQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELY-MLKYELQD 591
W+CD+CN + + RY L + D TG + + F E+I+G PA +L EL D
Sbjct: 139 WRCDKCNTNVSSVEARYWLHLDVMDNTGESKLMLFDSFVEQIIGIPACDLVDPTTEELDD 198
Query: 592 DVRFGEIIRSRVFNQYLFRLKIKEELYG---DEQRVKITVIRADQVNYSS---ESRYLLD 645
+ +++++ + Y F L ++++ DE +V V+ + +N+ + E Y +D
Sbjct: 199 PLPLPDVVKNIIGKTYQFALCVEQDNISRGNDEYKVS-EVLTSQNLNHPALEPEVDYPVD 257
Query: 646 LISKS 650
L S S
Sbjct: 258 LSSMS 262
>gi|357511469|ref|XP_003626023.1| Replication factor A protein [Medicago truncatula]
gi|355501038|gb|AES82241.1| Replication factor A protein [Medicago truncatula]
Length = 526
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 154/378 (40%), Gaps = 31/378 (8%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI-FLEAT 308
L+D G+I+ T ++ + +++ G Y I + + + + W++ ++ T
Sbjct: 46 LMDEKLGKIQATAKKTLIPKIRSLVQDGAAYEIQNVLVAHNEIRYRCTGHRWKLNLIDQT 105
Query: 309 STVDLCTEEDDSIPKQQFSFRHISEI-ESAENNSIVDVIGIVISVNP--SVPILRKNGME 365
+ + ++IP+ F F EI ES + + VDVIG V+ + +L K M
Sbjct: 106 KFTKI---DCNTIPEYHFEFVPFKEILESTKEDRHVDVIGRVVERDSLKEKEVLGKKSMV 162
Query: 366 TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSV----KSGKVNDFSG 421
+ L+DT G + +LW + + L V PV+ V K K G
Sbjct: 163 LD---ITLEDTEGNRIHCSLWDTYAIRMDAYLT--VHDPNSPVIVVIHLCKLKKYYATMG 217
Query: 422 KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISR---EIAAGGAKNEIHKTVS 478
S T+L ++ D E D G T +S+ + A++ + +
Sbjct: 218 IS-NAFYGTKLILDDDHPVVKEFLSKID-GADVEVTQGVSQITGSLIVPLAEDMLQSRMM 275
Query: 479 QIKNEGLGRSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKKVTQSGNRWQCDR 537
I E L S V V A I I+++ S+ Y AC +C ++ R C R
Sbjct: 276 TI--EDLIESSDQCVVIVLASIIGIEAEYSWYYDACT------KCAGRIKIIAGRMFCPR 327
Query: 538 CNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGE 597
CNQ + R+ L Q+ D TG T F + +G ++L + + +D +
Sbjct: 328 CNQSRNAVP-RFKLHVQVMDNTGSTSFILFDRNVSNYVGKSVQDLIDSQGQGNNDKGYPS 386
Query: 598 IIRSRVFNQYLFRLKIKE 615
+ V + LF+++I +
Sbjct: 387 DLDVLVGKKMLFKVEITD 404
>gi|297825773|ref|XP_002880769.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297326608|gb|EFH57028.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 344
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 533 WQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELY-MLKYELQD 591
W+CD+CN + + RY L + D TG + + F E+I+G PA +L EL D
Sbjct: 88 WRCDKCNTNVSSVEARYWLHLDVMDNTGESKLMLFDSFVEQIIGIPACDLVDPTTEELDD 147
Query: 592 DVRFGEIIRSRVFNQYLFRLKIKEELYG---DEQRVKITVIRADQVNYSS---ESRYLLD 645
+ +++++ + Y F L ++++ DE +V V+ + +N+ + E Y +D
Sbjct: 148 PLPLPDVVKNIIGKTYQFALCVEQDNISRGNDEYKVS-EVLTSQNLNHPALEPEVDYPVD 206
Query: 646 LISKS 650
L S S
Sbjct: 207 LSSMS 211
>gi|302781270|ref|XP_002972409.1| hypothetical protein SELMODRAFT_412779 [Selaginella moellendorffii]
gi|300159876|gb|EFJ26495.1| hypothetical protein SELMODRAFT_412779 [Selaginella moellendorffii]
Length = 158
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 504 KSDSFCYTACPLMIGDRQCNKKVTQ-SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLT 562
++ F Y AC ++ RQC KKVTQ S + WQC+ C+ D L I D T
Sbjct: 83 QTGDFYYPACVKVVNGRQCGKKVTQASESMWQCNSCDT-----DSGDALHLCILDSTAHI 137
Query: 563 WVTAFQESGEEILGCP 578
W AF ++ EI+G P
Sbjct: 138 WAVAFDDAANEIIGMP 153
>gi|413919338|gb|AFW59270.1| hypothetical protein ZEAMMB73_870626 [Zea mays]
Length = 351
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 15/181 (8%)
Query: 220 RWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVG 277
+++I ARV K + RY + + F L D G +I +T + V F ++
Sbjct: 111 KYSIVARVEVKFPIEPRYRDRQ------HFILSDIHGAKIEAITYVSVTVKHFNNLLHEK 164
Query: 278 RVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
VY + K L P + NF HL E++ + V+ T P + F ++ +I
Sbjct: 165 HVYHMHNVKFGLHPGEFNFRHLNGPMELYFNQQTIVEPYTVPIQMPPFPKHIFFNLDDIA 224
Query: 336 SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQ 395
N ++VD++ IV+ ++ + + R+I+ + D G + +WGD NK
Sbjct: 225 ELPNRTLVDIMAIVVHMD----TIHRTMWGPFRKIV-IMDARGSLHIIKVWGDLLNKNAL 279
Query: 396 K 396
+
Sbjct: 280 R 280
>gi|413933201|gb|AFW67752.1| hypothetical protein ZEAMMB73_289207 [Zea mays]
Length = 217
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNAVV 267
PI LNP + I+ RV K + R A DG + +L+ D G I A+
Sbjct: 5 PITELNPQKINVVIRVRVIRKLEFR---GATNDGPLRHINLILADEQGTAIHAEIPAALA 61
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
+I++ +VY I + P++ F + N I + + + P ++
Sbjct: 62 IEKGSLIQIDKVYEIRHFRVMPSRGYFKPVHNNLMIQFTLYTQAKVVNDPPHIFPIYIYN 121
Query: 328 FRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
++E +N ++DVIG++ + P + + R + +KD S S+++TL
Sbjct: 122 LTSFEKVEENVDNRNYLIDVIGMLTQI--GAPHVAGYNNSSIVRDIFIKDISDASLKITL 179
Query: 386 WGD---------FCNKEGQKLQEMVDVG 404
WGD CN+ K ++ VG
Sbjct: 180 WGDQASGFSIDNVCNESNNKPIVIMFVG 207
>gi|414868467|tpg|DAA47024.1| TPA: hypothetical protein ZEAMMB73_652886 [Zea mays]
Length = 710
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 15/177 (8%)
Query: 220 RWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVG 277
+++I ARV K + RY++ + F L D +G +I +T + V F ++
Sbjct: 86 KYSIVARVEVKFPIEPRYHDRQ------HFILSDINGAKIEAITYVSVTVKHFNNLLHEK 139
Query: 278 RVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
VY + K L P + NF HL E++ + V+ T P + F ++ +I
Sbjct: 140 HVYNMHNVKFGLHPGEFNFRHLNGPMELYFNQQTIVEPYTFPIQMPPFPKHIFFNLDDIA 199
Query: 336 SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNK 392
N S+VD++ IV+ ++ + + R+I+ + D G + +WGD NK
Sbjct: 200 ELPNRSLVDIMAIVVHMD----TIHRTMWGPFRKIV-IMDARGSLHIIKVWGDLLNK 251
>gi|413922042|gb|AFW61974.1| hypothetical protein ZEAMMB73_162126 [Zea mays]
Length = 336
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 15/181 (8%)
Query: 220 RWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVG 277
+++I ARV K + RY + + F L D +G +I +T + V F ++
Sbjct: 96 KYSIVARVEVKFPIEPRYRDRQ------HFILSDINGAKIEAITYVSVTVKHFNNLLHEK 149
Query: 278 RVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
VY + K L P + NF HL E++ + V+ T P + F ++ +I
Sbjct: 150 HVYNMHNVKFGLHPGEFNFRHLNGPMELYFNQQTIVEPYTVPIQMPPFPKHIFFNLDDIA 209
Query: 336 SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQ 395
N ++VD++ IV+ ++ + + R+I+ + D G + +WGD NK
Sbjct: 210 ELPNRTLVDIMAIVVHMD----TIHRTMWGPFRKIV-IMDARGSLHIIKVWGDLLNKNAL 264
Query: 396 K 396
+
Sbjct: 265 R 265
>gi|297849862|ref|XP_002892812.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338654|gb|EFH69071.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 586
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 127/280 (45%), Gaps = 35/280 (12%)
Query: 214 LNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEI 273
++P R+ IK ++ L R + G L+D G + T + ++++F
Sbjct: 15 IDPAAQRYKIKVQIV---KLWR-GFQKETGSAIEMVLIDEKGTRMHATVEDKLMNKFKSD 70
Query: 274 IEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQF-SFRHIS 332
++ + L+ L + + ++I T++V +C + + +P++ F F I
Sbjct: 71 LKEDQSILVDTFQLVNNGFEYKTSPHSFKISFFRTTSVTICDDFPNDVPEKYFVDFLKIL 130
Query: 333 EIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNK 392
++ ++VDVIG ++++ P I+ + G T + + L+DT+ + T WG + ++
Sbjct: 131 A-GVLDSKTLVDVIGHIVNIGPLEDIMIR-GRSTTKLDVELRDTNDARLLCTFWGKYADQ 188
Query: 393 ----EGQKLQEMVDVGFFPVLSVKSGKVNDFSG-KSIG-TIPSTQLFINPDFAEAHELRE 446
+ +M+ V V+ ++ +F G +SI + ST++ ++P AHE R
Sbjct: 189 VSTYAAEHSADMI------VCVVRFAQIKEFRGNRSISNSYNSTRILLDPQTKVAHEFRS 242
Query: 447 WFDSGGKNAATVSISREIAAGGA----KNEIHKTVSQIKN 482
NAA V I GG K E K+ +++K+
Sbjct: 243 -------NAAAV-----IYLGGYEIKRKAEYLKSATRVKD 270
>gi|302825355|ref|XP_002994300.1| hypothetical protein SELMODRAFT_432229 [Selaginella moellendorffii]
gi|300137821|gb|EFJ04635.1| hypothetical protein SELMODRAFT_432229 [Selaginella moellendorffii]
Length = 176
Score = 51.6 bits (122), Expect = 0.001, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 360 RKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDF 419
+ +G +RR+L+L D SG S+++ LW EG +++E G P++ VK +++D+
Sbjct: 57 KDSGAFMRRRMLSLSDESGHSIDMCLWDSKAEDEGSEIEEKPGQGERPIVCVKGSRISDY 116
Query: 420 SGKSIGTIPSTQLFINPDF 438
+GK I + + F DF
Sbjct: 117 NGKFISV--TVKEFQTGDF 133
>gi|343957969|emb|CCA30601.1| replication factor A protein 1 homolog, partial [Glomus etunicatum]
Length = 181
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 36/168 (21%)
Query: 422 KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKN--EIHKTVSQ 479
K + T ST L NP EA EL EW+ +GG S++ + GG+ N E K++ +
Sbjct: 1 KGLSTTNSTVLITNPSLPEATELSEWYSTGGSQLEFNSLASQ--TGGSINIKEAQKSLEE 58
Query: 480 IK-NEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRC 538
IK ++ LG + + + A ++ D Q + T
Sbjct: 59 IKSDKTLGLKK------------ILAKRKYLEVAIIGVVIDVQNHLTPT----------- 95
Query: 539 NQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLK 586
YRY+L +I D + W+ F E+ ILG PA + L+
Sbjct: 96 --------YRYILPIRITDHSDSVWMNCFDETAALILGMPADDFRKLR 135
>gi|414886401|tpg|DAA62415.1| TPA: hypothetical protein ZEAMMB73_531881 [Zea mays]
Length = 409
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 13/180 (7%)
Query: 220 RWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVGR 278
+++I ARV K + R F L D +G +I +T V F ++
Sbjct: 169 KYSIVARVEVKFPIEPCFRDRQ-----HFILSDINGAKIEAITYMYETVKHFDNLLHEKH 223
Query: 279 VYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIES 336
VY + K SL P + NF HL E+ L+ + V+ T +P + ++ +I
Sbjct: 224 VYKMHNVKFSLHPGEFNFRHLNGHMELCLDQQTIVEPYTVPIQMVPFPKQILLNLDDIAE 283
Query: 337 AENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQK 396
N ++VD++ IV+ ++ M R + + D G + +WGD NK +
Sbjct: 284 LPNRTLVDIMAIVVHLDTI-----HRTMWCPFRKIVIMDARGYLHIIKVWGDLLNKNALR 338
>gi|414584906|tpg|DAA35477.1| TPA: hypothetical protein ZEAMMB73_493662 [Zea mays]
Length = 291
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 15/181 (8%)
Query: 220 RWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVG 277
+++I ARV K + RY + + F L D +G +I +T + V F ++
Sbjct: 59 KYSIVARVEVKFPIEPRYRDRQ------HFILSDINGAKIEAITYVSVTVKHFNNLLHEK 112
Query: 278 RVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
VY + K L P NF HL E++ + V+ T P + F ++ +I
Sbjct: 113 HVYNMHNVKFGLHPGAFNFRHLNGPMELYFNQQTIVEPYTVPIQMPPFPKHIFFNLDDIA 172
Query: 336 SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQ 395
N ++VD++ IV+ ++ + + R+I+ + D G + +WGD NK
Sbjct: 173 ELPNRTLVDIMAIVVHMD----TIHRTMWGPFRKIV-IMDARGSLHIIKVWGDLLNKNAL 227
Query: 396 K 396
+
Sbjct: 228 R 228
>gi|391331509|ref|XP_003740187.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 278
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 96/236 (40%), Gaps = 53/236 (22%)
Query: 222 AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYL 281
A+ R+ +K ++ + GK+F+F L D G+I V + YE I + ++
Sbjct: 76 AVLGRIKSKTPIKVWTKGTDTGKLFNFVLSDM-SGDINVISSGNAAEEIYEKITLSKIVP 134
Query: 282 ISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNS 341
I+ D +P+ Q +S++ + NS
Sbjct: 135 IA----------------------------------GDDLPEIQSLTTILSDLATKPANS 160
Query: 342 IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLW----GDFCNKEGQKL 397
++D+ ++ V P +G Q++I+ + D S R + + +W G F +KEGQ +
Sbjct: 161 VIDIRVVIFDVGPPQSFTCHDGTSRQKQIITVLDKSMRMINVGVWSEFVGKFDDKEGQAV 220
Query: 398 QEMVDVGFFPVLSVKSGKVNDFSG-KSIGTIPSTQLFINPDFAEAHELREWFDSGG 452
++ ++ D+ G + + + +T L D E EL+ WF++ G
Sbjct: 221 IN------------RNLQIRDYKGVRQLSSTSNTMLAAITD-TETRELQTWFETTG 263
>gi|320170668|gb|EFW47567.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 467
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 166/435 (38%), Gaps = 73/435 (16%)
Query: 246 FSFDLLDSDGGEIRVTCFN------AVVDRFY--EIIEVGRVYLISKGSLKPAQKNFNHL 297
F+F L DS+ I T + + RF +++EV ++ K P Q+
Sbjct: 44 FTFTLRDSESDSINCTMWGDPNLIGSAHSRFNTGDVVEVIHPQVVPK---NPTQEQRWMP 100
Query: 298 KNEWEIFLEATSTVDLCTEEDDSIPKQQF---------SFRHISEIESAE---NNSIVDV 345
+ L+ S+ D+ D +Q+F F I +I ++ + ++V
Sbjct: 101 RTSSAYALQLNSSSDVQLYMGDLPDRQRFVRIPMLYESGFVKIQDILASPQELSQQYINV 160
Query: 346 IGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGF 405
+GIV + NG T + + L D SG + +TLWG C + F
Sbjct: 161 LGIVSRIGAVTSTTTSNGRATDKLEVYLTDDSGGEIRMTLWGS-CIAMASNWTVRDTILF 219
Query: 406 FPVLSVK------SGKVNDFSGKSIGTIPSTQLFIN--------PDFAEAHELREWFDSG 451
+ V+ S ND + + + +T+L + PD EA EL ++
Sbjct: 220 LSDVRVRTSSFVPSAARNDPTQEHERMVYTTELSFDNCSLVTEYPDLREAQELYDYAQQL 279
Query: 452 GKNAATVS------ISREIAAGGAKNEIHKTVSQIKNEGLG--RSEKPDWVTVRAFITFI 503
+A T + +SR +EI ++ + N + + +P FIT +
Sbjct: 280 PADAFTTASRMGGGMSRAAFKPIRNDEIVESQGKFVNVDVAGVYALRPPVFVFDVFITDL 339
Query: 504 KSDSFCYTA-----CPLMIGDRQCNKK--VTQSGNRWQCDRC--NQEIDECDYRYLLQAQ 554
D F YT CP CN++ V + NR +C N + +++ L
Sbjct: 340 PLDDF-YTQVVIARCP------GCNQQLPVEHACNRPECANLGENAADNPANWQIQLPIA 392
Query: 555 IQDQTGLTWVTAFQ-ESGEEILGCPAKELYMLKYELQDDVRFGEII-RSRV--------- 603
+ D TG Q + ++G A ELY + YE + +R I R RV
Sbjct: 393 VTDATGTLLKIVLQGDPAMSLIGVDASELYFMSYEERSALRRRHIFQRHRVVCKMSQYRS 452
Query: 604 FNQYLFRLKIKEELY 618
F QY ++ +L+
Sbjct: 453 FAQYPLYEVVRMDLF 467
>gi|77548273|gb|ABA91070.1| hypothetical protein LOC_Os11g01460 [Oryza sativa Japonica Group]
gi|125535492|gb|EAY81980.1| hypothetical protein OsI_37160 [Oryza sativa Indica Group]
Length = 567
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 155/404 (38%), Gaps = 55/404 (13%)
Query: 221 WAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
W IK +V D N+A + L+D G I + + ++D + I VY
Sbjct: 16 WNIKVKVMRLWD--SVNSATDELLSLDMILMDEQGDVIHASIWKKLIDNYKTQINESSVY 73
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENN 340
+ ++ +QK + + N+ +I + V E +S P+ F F I ++ N
Sbjct: 74 VFGNFKVQESQK-YRPVCNDLKITFMYNTKVKQVKETAESFPEYYFDFASIDTLQDRANK 132
Query: 341 S--IVDVIGIVISVNP-SVPILRKNGME---TQRRILNLKDTSGRSVELTLWGDFCNKEG 394
+ DVIG++ + P + RKN + R + L G + LTLWG
Sbjct: 133 DQHLSDVIGLLTRMKPIETRMTRKNTPNPRLAEIREIELLLLGGDKIRLTLWGQLARFFS 192
Query: 395 QKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHEL--REWFDSGG 452
+ + +G V+ V S V ++ G S+ + +T+++ N E L R++ +
Sbjct: 193 EDV-----IGNQTVVIVTSTTVQEYIGLSLRSSSATRIYTNLHIRETWTLIDRQFSEETI 247
Query: 453 KNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTA 512
V S G + ++ +K+ R P S F +T+
Sbjct: 248 PKMMEVDKS---TQGTREEQMFYNRKTLKDITEMRHGNPG------------SQEFVFTS 292
Query: 513 CPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGE 572
KVT DR + I + Y L+ QI D T T T F + +
Sbjct: 293 ------------KVT-------IDRVQENI---QWWYRLRLQISDHTTSTSCTIFDDVAQ 330
Query: 573 EILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEE 616
+L P L L D++ II+ Q +F+ K+ E+
Sbjct: 331 SMLETPVSSLLNLLDGKNDEI--PNIIQQLCGKQLIFKFKLSEQ 372
>gi|5732052|gb|AAD48951.1|AF147262_14 contains similarity to Oryza sativa replication protein A1
(GB:AF009179) [Arabidopsis thaliana]
gi|7267341|emb|CAB81115.1| AT4g07450 [Arabidopsis thaliana]
Length = 439
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 127/303 (41%), Gaps = 30/303 (9%)
Query: 336 SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQ 395
SA +N + +V+G V+ + L N T++ +L+D + TLWG + Q
Sbjct: 53 SANSNILHNVMGQVVD-RSKIQDLNANNKPTKKIDFHLRDQHDTRLACTLWGKYAEIVDQ 111
Query: 396 KLQEMVDVGFFPVLSVKSGKVNDFSG-KSIG-TIPSTQLFINPDFAEAHELREWFDSGGK 453
QE D V ++ K+N ++ KS+ + +Q+F++P AE ++ + G
Sbjct: 112 ACQESADGTV--VCLIRFAKINLYNDTKSVSNSFDVSQVFVDPTLAELGLFKQSIPTDGL 169
Query: 454 N-AATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTA 512
++ S + + A ++ Q + L S+ TV ++ I +D Y
Sbjct: 170 TLGSSGSFHKRLYAPRTGDDDGDYPRQTIKDVLTSSDVGKCKTV-CTVSAIDTDWPWYYF 228
Query: 513 CPLMIGDRQCNKKVTQSGN------------RWQCDRCNQEIDECDYRYLLQAQIQDQTG 560
C R NKKV + R+ C+ CN ++ L I QTG
Sbjct: 229 CC-----RAHNKKVVEEEAIKLEDVKLPQKPRFWCEICNGFAKYVVAKFWLHLHIMGQTG 283
Query: 561 LTWVTAFQESGEEILGCPAKELYMLKY-ELQDDVRFGEII---RSRVFNQYLFRLKIKEE 616
F +EI G A EL + E++D ++I + + F Q+LF ++ +E
Sbjct: 284 EARCMLFDSHAKEIFGTIAPELLDGSFDEIEDPTVLPDVINGLKGKTF-QFLFCIQ-REN 341
Query: 617 LYG 619
++G
Sbjct: 342 IFG 344
>gi|321456442|gb|EFX67550.1| hypothetical protein DAPPUDRAFT_330970 [Daphnia pulex]
Length = 200
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 20/133 (15%)
Query: 315 TEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLK 374
TEE P F+F ++ + EN+SIVDVIG+V+ + V L
Sbjct: 42 TEEAAEKPTITFNFVPFDQLPNQENDSIVDVIGLVLHLQEKV----------------LV 85
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
+T + +L +F + L+++ D + VK N F + + T+ ST + I
Sbjct: 86 ETKTTKISRSLTAEFVD--SSLLEKVADKCIVALPGVKIS--NKFGRRYLETLSSTVVQI 141
Query: 435 NPDFAEAHELREW 447
N D E ELREW
Sbjct: 142 NADMTEVRELREW 154
>gi|414877177|tpg|DAA54308.1| TPA: hypothetical protein ZEAMMB73_716739 [Zea mays]
Length = 299
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 220 RWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVG 277
+++I ARV K + RY + + F L D G +I +T + V F ++
Sbjct: 59 KYSIVARVEVKFPIEPRYRDRQ------HFILSDIHGAKIEAITYVSVTVKHFNNLLHEK 112
Query: 278 RVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
VY + K L P NF HL E++ + V+ T P + F ++ +I
Sbjct: 113 HVYNMHNVKFGLHPGPFNFRHLNGPMELYFNQQTIVEPYTVPIQMPPFPKHIFFNLDDIA 172
Query: 336 SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQ 395
N ++VD++ IV+ ++ + + R+I+ + D G + +WGD NK
Sbjct: 173 ELPNRTLVDIMAIVVHMD----TIHRTMWGPFRKIV-IMDARGSLHIIKVWGDLLNKNAL 227
Query: 396 K 396
+
Sbjct: 228 R 228
>gi|413926629|gb|AFW66561.1| hypothetical protein ZEAMMB73_966381 [Zea mays]
gi|414590868|tpg|DAA41439.1| TPA: hypothetical protein ZEAMMB73_922043 [Zea mays]
Length = 299
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 220 RWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVG 277
+++I ARV K + RY + + F L D G +I +T + V F ++
Sbjct: 59 KYSIVARVEVKFPIEPRYRDRQ------HFILSDIHGAKIEAITYVSVTVKHFNNLLHEK 112
Query: 278 RVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
VY + K L P NF HL E++ + V+ T P + F ++ +I
Sbjct: 113 HVYNMHNVKFGLHPGPFNFRHLNGPMELYFNQQTIVEPYTVPIQMPPFPKHIFFNLDDIA 172
Query: 336 SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQ 395
N ++VD++ IV+ ++ + + R+I+ + D G + +WGD NK
Sbjct: 173 ELPNRTLVDIMAIVVHMD----TIHRTMWGPFRKIV-IMDARGSLHIIKVWGDLLNKNAL 227
Query: 396 K 396
+
Sbjct: 228 R 228
>gi|414869930|tpg|DAA48487.1| TPA: hypothetical protein ZEAMMB73_818761 [Zea mays]
Length = 299
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 15/181 (8%)
Query: 220 RWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVG 277
+++I ARV K + RY + + F L D G +I +T + V F ++
Sbjct: 59 KYSIVARVEVKFPIEPRYRDKQ------HFILSDIHGAKIEAITYVSVTVKHFSNLLHEK 112
Query: 278 RVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
VY I K L P + NF HL E++ + V+ T P + F ++ +I
Sbjct: 113 HVYNIHNVKFGLHPGEFNFRHLNGPMELYFNQQTIVEPYTVPIQMPPFPKHIFFNLDDIA 172
Query: 336 SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQ 395
N ++V+++ IV+ ++ + + R+I+ + D G + +WGD NK
Sbjct: 173 ELPNRTLVNIMAIVVHMD----TIHRTMWGPFRKIV-IMDARGSLHIIKVWGDLLNKNAL 227
Query: 396 K 396
+
Sbjct: 228 R 228
>gi|413924401|gb|AFW64333.1| hypothetical protein ZEAMMB73_790128 [Zea mays]
Length = 280
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 19/183 (10%)
Query: 220 RWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVG 277
+++I ARV K + R+ + + F L D +G +I +T V F ++
Sbjct: 40 KYSIVARVEVKFPIEPRFRDRQ------HFVLSDINGAKIEAITYMYETVKHFDNLLHEK 93
Query: 278 RVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE--EDDSIPKQQFSFRHISE 333
VY + K SL P + NF HL E+ L + V+ T + S PKQ F ++++
Sbjct: 94 HVYKMHNVKFSLHPGEFNFRHLNGPMELCLNQQTIVEPYTFPIQMVSFPKQ--IFLNLAD 151
Query: 334 IESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKE 393
I N ++VD++ IV+ ++ + + R+I+ + D G + +WGD NK
Sbjct: 152 IAELPNRTLVDIMAIVVHLD----TIHRTMWGPFRKIV-IMDARGSLHIIKVWGDLLNKN 206
Query: 394 GQK 396
+
Sbjct: 207 ALR 209
>gi|413924402|gb|AFW64334.1| hypothetical protein ZEAMMB73_790128 [Zea mays]
Length = 283
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 19/183 (10%)
Query: 220 RWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVG 277
+++I ARV K + R+ + + F L D +G +I +T V F ++
Sbjct: 40 KYSIVARVEVKFPIEPRFRDRQ------HFVLSDINGAKIEAITYMYETVKHFDNLLHEK 93
Query: 278 RVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE--EDDSIPKQQFSFRHISE 333
VY + K SL P + NF HL E+ L + V+ T + S PKQ F ++++
Sbjct: 94 HVYKMHNVKFSLHPGEFNFRHLNGPMELCLNQQTIVEPYTFPIQMVSFPKQ--IFLNLAD 151
Query: 334 IESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKE 393
I N ++VD++ IV+ ++ + + R+I+ + D G + +WGD NK
Sbjct: 152 IAELPNRTLVDIMAIVVHLD----TIHRTMWGPFRKIV-IMDARGSLHIIKVWGDLLNKN 206
Query: 394 GQK 396
+
Sbjct: 207 ALR 209
>gi|413923473|gb|AFW63405.1| hypothetical protein ZEAMMB73_358085 [Zea mays]
Length = 329
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 15/177 (8%)
Query: 220 RWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVG 277
+++I ARV K + R+ + + F L D +G +I +T V F ++
Sbjct: 160 KYSIVARVEVKFPIEPRFRDRQ------HFILSDINGAKIEAITYMYETVKHFDNLLHGK 213
Query: 278 RVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
VY + K SL P + NF HL E+ L+ + V+ T P + ++++I
Sbjct: 214 HVYKMHNVKFSLHPGEFNFRHLNGPMELCLDQQTIVEPYTVPIQMAPFPKQILLNLADIA 273
Query: 336 SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNK 392
N ++VD++ IV+ ++ + + R+I+ + D G + +WGD NK
Sbjct: 274 ELPNRTLVDIMAIVVHLD----TIHRTMWGPFRKIV-IMDARGYLHIIKVWGDLLNK 325
>gi|108862225|gb|ABA96519.2| hypothetical protein LOC_Os12g06230 [Oryza sativa Japonica Group]
Length = 2279
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 127/322 (39%), Gaps = 29/322 (9%)
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFR 329
F II G+VY ++ ++P +N+ + N I +T++ + P +S
Sbjct: 1497 FGPIITEGKVYRLTFYRVRPCSRNYRPVNNRMSINFTKWTTLEEHLDVPADFPCYAYSPT 1556
Query: 330 HISEIESA--ENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELTLW 386
+E+ S +S DVIG++ V+ I R ++ +R + +++ + + LW
Sbjct: 1557 PYNELRSHVDRKDSFTDVIGVITEVSSVTTIQTRIKDGDSLKRSVCIRNADNVIINIALW 1616
Query: 387 G--------DFCNKEGQK-LQEMVDVGFFPVLSVKSGKVND--FSGKSIGTIPSTQLFIN 435
G D G+K Q + VG V++ + + SG S + + +IN
Sbjct: 1617 GERATSFPEDAIISAGEKEPQVAIFVGTLVRGYVRNASLGNVSLSGNS-----ACKWYIN 1671
Query: 436 PDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVT 495
D E + ++ + + I GA+ KTV+Q+K + +K ++
Sbjct: 1672 IDTPEVNSFKDSIKGNYEPIQFIDIPVPNVIVGAE---QKTVAQLKELHPFKFKKHEFQV 1728
Query: 496 VRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQC-DRCNQEIDECDYRYLLQAQ 554
F S+ YTAC + C K G ++C D I R+ L
Sbjct: 1729 TVVIKKFCMQASWWYTACDI------CKKTAKPYGRAYRCGDPTCPPIVSASPRFKLNII 1782
Query: 555 IQDQTGLTWVTAFQESGEEILG 576
D+T T F + ++G
Sbjct: 1783 AGDETAETTFILFGRLAQRLIG 1804
>gi|428163313|gb|EKX32390.1| hypothetical protein GUITHDRAFT_121440 [Guillardia theta CCMP2712]
Length = 239
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%)
Query: 128 QPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAGSIVRSFQPTVQPPY 187
Q ++ N G+F N G+F N GSF N G+F+ N GS RSFQ + +
Sbjct: 68 QGANEGSFQGANEGSFQGANDGSFQGANDGSFQGANDGSFQGANEGSFERSFQGAIHGAF 127
Query: 188 Q 188
Q
Sbjct: 128 Q 128
>gi|357439657|ref|XP_003590106.1| hypothetical protein MTR_1g044430 [Medicago truncatula]
gi|355479154|gb|AES60357.1| hypothetical protein MTR_1g044430 [Medicago truncatula]
Length = 552
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 145/358 (40%), Gaps = 38/358 (10%)
Query: 278 RVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESA 337
RV+ I S+ ++ ++ ++I + + + C +D +P + EI +
Sbjct: 5 RVFSIGNFSVASNVGSYRTARHPYKINFQYGTKIKQC--DDKFVPADIYVIGDPREIFQS 62
Query: 338 ENNS--IVDVIGI--VISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKE 393
E ++ ++DV+G+ V+ V S NG +++ + L D +G ++TL+G + ++
Sbjct: 63 EYDTDYLIDVMGMLKVVGVEKSYTC---NGSQSKMIPIEL-DYNGFHFKVTLFGPYVDEL 118
Query: 394 GQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI-GTIPSTQLFINPDFAEAHELRE-WFDSG 451
L SG+ + +I TI +T++ NP F A LR+ ++
Sbjct: 119 NAFLA--------------SGETENVVVATIQNTINATKVLFNPTFTAALLLRKRMVEND 164
Query: 452 GKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDS-FCY 510
+ +S E + + + EGL + + V + I DS + Y
Sbjct: 165 DSPSPGISKITEASKVSVEEDFFNLSPMTTVEGLKDCAEEKFFAVFGTVNVIVDDSDWWY 224
Query: 511 TACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQES 570
T+C + CNKKV + C +CN+ + RY++ ++ D T F
Sbjct: 225 TSCVV------CNKKVYPDEKMYFCSKCNKHVLNVTPRYMI--KVVDHTDSATFVLFDRD 276
Query: 571 GEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKI---KEELYGDEQRVK 625
E+ ++ + D + I + V YLF+++ +Y RVK
Sbjct: 277 AAELFKKTCADMIESRGMGTDASEVPKDILAMVEKSYLFKVETNLGSSTMYEKSYRVK 334
>gi|255583595|ref|XP_002532553.1| conserved hypothetical protein [Ricinus communis]
gi|223527708|gb|EEF29814.1| conserved hypothetical protein [Ricinus communis]
Length = 99
Score = 50.1 bits (118), Expect = 0.004, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 14 NGGDVNSKPLVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVV 73
+GG S LV ++LI +R RF++SD + A+L T +N V G +K GS+V
Sbjct: 27 SGGRGFSPDLVLTKSLELI----DRSRFVLSDGLHMHRAILLTPMNHLVNDGNLKAGSIV 82
Query: 74 QLIDYICSTVQ 84
QLI Y C+ V+
Sbjct: 83 QLIHYKCTNVE 93
>gi|410721996|ref|ZP_11361314.1| single-stranded DNA-binding protein [Methanobacterium sp.
Maddingley MBC34]
gi|410597945|gb|EKQ52546.1| single-stranded DNA-binding protein [Methanobacterium sp.
Maddingley MBC34]
Length = 791
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 105/251 (41%), Gaps = 49/251 (19%)
Query: 335 ESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCN--- 391
E AE + V + G ++S+ + +G R +++ D +G V +LW D N
Sbjct: 533 ELAEGDRDVSIFGRILSMGEPTQFTKSDGSAGIVRSMDIADDTG-VVRASLWDDKANTSF 591
Query: 392 KEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSG 451
KEG+ ++ +++ +VN + + ++ T + PD E
Sbjct: 592 KEGEAVK------------IENPRVNLRNDRVELSVGRTTIITKPDEEET---------- 629
Query: 452 GKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDW-VTVRAFITFIKSDSFCY 510
+ + +EI + KN +G E+ D + V + I+ + +
Sbjct: 630 --------------SVPSLDEIEGKLYPSKN--IGDIEEGDQSIKVTGEVVDIRGNKILF 673
Query: 511 TACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQES 570
CP CNK+V + + + CD C ++I++ + ++ ++D TG +T F+++
Sbjct: 674 EMCP------NCNKRVNWAEDGYICDICGEKIEKPNMLMIISLMLEDDTGTISITFFRKA 727
Query: 571 GEEILGCPAKE 581
EE+L E
Sbjct: 728 AEEVLDMTTAE 738
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 106/244 (43%), Gaps = 35/244 (14%)
Query: 225 ARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEI-IEVGRV--YL 281
ARV +R ++ DGKV S +L D G I+ T +N + ++ ++ G L
Sbjct: 197 ARVVRIPRIRSFDRNGRDGKVASLELQDK-SGSIQFTLWNKDTNLIEDLDLKEGDAIKVL 255
Query: 282 ISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNS 341
++G + + + NH S + + D +P+ I + N
Sbjct: 256 GAQGRARNGEVSLNH------------SWIGRIVKGDFDVPEYHEDILKIGDAHEMRN-- 301
Query: 342 IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMV 401
V +IG+V V ++ R +G + + + L+D +G ++ LTLW + +
Sbjct: 302 -VTIIGLVSKVYDTITFERDDGSTGKVKSMELEDDTG-AIRLTLWNEDTE---------I 350
Query: 402 DVGFFPVLSVKSGKV--NDFSGKS--IGTIPSTQLFINPDFAEAHELREWFDSGGKNAAT 457
DV +L + G + +D+SG + + T +T+L NP + ++++ + GK
Sbjct: 351 DVKKGDILKIIGGNIEFDDYSGTNYRVNTNWNTKLITNPPIDQ--DMKDTLNEVGKYLTP 408
Query: 458 VSIS 461
+ IS
Sbjct: 409 MKIS 412
>gi|284434672|gb|ADB85379.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 305
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 104/242 (42%), Gaps = 19/242 (7%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNAVVD 268
++ +NP W + ARV+ L Y D ++ DL+ D G I V+
Sbjct: 6 LSEINPTSKHWTVCARVSR---LWEYRGNVDDAEIQHLDLVLVDEQGNAIYAEIPKEHVE 62
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
+++ +Y + + P + + + +++ I + + ++ + + P ++
Sbjct: 63 AKRVLLQEEHIYTFRRFLVSPNKGKYRPVDSDYMIEIGYYTEIEELFDAAPTFPMYAYTL 122
Query: 329 RHISEIES--AENNSIVDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSGRSVELTL 385
+ ++S E + +DVIG+V +V+ + I N T +R++ +KD +TL
Sbjct: 123 TPLENLDSYIGETRNFLDVIGVVKAVSNAASIQGSNQSSTTTKRLVVIKDAKDCETTVTL 182
Query: 386 WGDFCNK-EGQKLQEM-----VDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFA 439
WG +G+ + E V F +L + G+ SG S + + +I+P+
Sbjct: 183 WGQRAKDFDGEYVYEKEQKNPVPALFVGILMKRYGQNEGLSGGS-----ACRWYISPNIP 237
Query: 440 EA 441
EA
Sbjct: 238 EA 239
>gi|413926426|gb|AFW66358.1| hypothetical protein ZEAMMB73_054825 [Zea mays]
Length = 301
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 220 RWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVG 277
+++I ARV K + RY + + F L D G +I +T + V F ++
Sbjct: 59 KYSIVARVEVKFPIEPRYRDRQ------HFILSDIHGAKIEAITYVSVTVKHFNNLLHEK 112
Query: 278 RVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
VY + K L P NF HL E++ + V+ T P + F ++ +I
Sbjct: 113 HVYNMHNVKFGLHPGPFNFRHLNGPMELYFNQQTIVEPYTVPIQMPPFPKHIFFNLDDIA 172
Query: 336 SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQ 395
N ++VD++ IV+ ++ + + R+I+ + D G + +WGD NK
Sbjct: 173 ELPNRTLVDIMAIVVHMD----TIHRTMWGPFRKIV-IMDARGSLHIIKVWGDLLNKNAL 227
Query: 396 K 396
+
Sbjct: 228 R 228
>gi|413932344|gb|AFW66895.1| hypothetical protein ZEAMMB73_049939 [Zea mays]
Length = 413
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 50/257 (19%)
Query: 344 DVIGIVISVNPSVPILRKNGMETQ--RRILNLKDTSGRSVELTLWG--------DFCNKE 393
DVIG V ++ V +R +TQ +R + +++ S +E+ LWG D +
Sbjct: 29 DVIGAVTMIS-DVATIRTKMRQTQTAKRSVTIQNESCTPLEVVLWGGQATSFPADQISIA 87
Query: 394 GQ-KLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGG 452
GQ LQ ++ VG L+ +G S S + ++NP EA L
Sbjct: 88 GQDSLQIIIFVG---TLARSYAGTTSLTGGS-----SCKWYVNPQVPEATSL-------- 131
Query: 453 KNAATVSISRE--IAAGGAKNEI-------HKTVSQIKNEGLGRSEKPDWVTVRAFITFI 503
AA++ R ++A G+ + HK VS+IK+ + EK +W+ +T +
Sbjct: 132 --AASLQHKRSPIMSAAGSTQRVPRISTAEHKKVSEIKHLHPFKHEKVEWLVT---VTVL 186
Query: 504 KSDS-FCYTACPLMIGDRQCNKKVTQSGNRWQC-DRCNQEIDECDYRYLLQAQIQDQTGL 561
K D + Y +C R+C KK G+ ++C D + + RY L D+ G
Sbjct: 187 KIDQLWWYESC------RKCLKKTKPHGDAYKCSDSGCGHVGPPNPRYRLLITAGDEIGE 240
Query: 562 TWVTAFQESGEEILGCP 578
T F + I+ P
Sbjct: 241 TDFILFGRMAQRIVKKP 257
>gi|308081030|ref|NP_001182790.1| uncharacterized protein LOC100500983 [Zea mays]
gi|195623976|gb|ACG33818.1| hypothetical protein [Zea mays]
Length = 305
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 98/242 (40%), Gaps = 26/242 (10%)
Query: 214 LNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSD--GGEIRVTCFNAVVDRFY 271
L P++ I+ V+ K R A G + D++ SD G I V + ++
Sbjct: 9 LAPHKIHAKIQVHVSRKWLFR---GATDSGPLQHVDMVLSDREGNAIYVEIPGNLAEQKA 65
Query: 272 EIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHI 331
IE G VY IS+ + A+ F + + I + V T + P +
Sbjct: 66 TNIEEGGVYDISRFRVCAAKTVFKIVDGDKMIQFTFHTIVKRVTSPPTTFPLYVYRLTSF 125
Query: 332 SEIESA--ENNSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKDTSGRSVELTLWG- 387
IE N+ VDV+G++ ++ P+ +R +T R + ++D S +++++TLW
Sbjct: 126 DLIEPHVQTTNNFVDVLGVITEIHELTPVHVRSQLTQTVTRTIIIEDLSNKTMKITLWAD 185
Query: 388 --------DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFA 439
D + KL ++ VG P F G + P+ + + NP
Sbjct: 186 QAIMFNLHDVYDANTNKLILVLFVGCLPKF---------FKGVYLSGGPACRWYFNPTIP 236
Query: 440 EA 441
EA
Sbjct: 237 EA 238
>gi|413943162|gb|AFW75811.1| hypothetical protein ZEAMMB73_150897 [Zea mays]
Length = 228
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 93/247 (37%), Gaps = 40/247 (16%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNAVV 267
PI LNP + I+ RV K + R A DG + +L+ D G I A+
Sbjct: 5 PITELNPQKINVVIRVRVIRKWEFR---GATNDGPLRHINLILADEQGTTIHAEIPAALA 61
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
+I++ +VY I + P++ F + N I + + + P ++
Sbjct: 62 TEKGSLIQIDKVYEIRHFRVMPSRGYFKPVHNNLMIQFTLYTQAKVVNDPPHIFPIYIYN 121
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
++E +N + G N R I +KD S S+++TLWG
Sbjct: 122 LTSFEKVEENVDNRNYLIAG-------------YNNSSIVRDIF-IKDISDASLKITLWG 167
Query: 388 D---------FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI--GTIPSTQLFINP 436
D CN+ K ++ VG F G+S GT +T F NP
Sbjct: 168 DQASGFSIDNVCNQSNNKPIVIMFVGCL---------AKQFKGQSYLSGTTATTWYF-NP 217
Query: 437 DFAEAHE 443
+ EA E
Sbjct: 218 NIPEAQE 224
>gi|413942292|gb|AFW74941.1| hypothetical protein ZEAMMB73_054394 [Zea mays]
Length = 242
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 247 SFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVGRVYLIS--KGSLKPAQKNFNHLKNEWEI 303
F D +G +I +T V F ++ VY + K SL P + NF HL E+
Sbjct: 47 HFIFYDINGAKIEAITYMYETVKHFDNLLHEKHVYKMHNVKFSLHPGEFNFRHLNGPMEL 106
Query: 304 FLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNG 363
L+ + V+ T +P + ++++I N ++VD++ IV+ ++ + +
Sbjct: 107 CLDQQTIVEPYTVPIQMVPFPKQILLNLADITELPNRTLVDIMAIVVHLD----TIHRTM 162
Query: 364 METQRRILNLKDTSGRSVELTLWGDFCNKEGQK 396
R+I+ + D G + +WGD NK +
Sbjct: 163 WGPFRKIV-IMDARGYLHIIKVWGDLLNKNALR 194
>gi|77552759|gb|ABA95556.1| hypothetical protein LOC_Os11g47400 [Oryza sativa Japonica Group]
Length = 296
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 8/107 (7%)
Query: 510 YTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQE 569
Y +C L CNK V Q +++ C CN+ + RY L+ QI D T T T F +
Sbjct: 30 YMSCNL------CNKIVIQKNDKYHCRNCNKYPENTTPRYRLRLQISDHTTSTSCTIFDD 83
Query: 570 SGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEE 616
+ +L P L L D++ II+ Q +F+ K+ E+
Sbjct: 84 VAQSMLETPVSSLLNLLDGKNDEI--PNIIQQLCGKQLIFKFKLSEQ 128
>gi|413916178|gb|AFW56110.1| hypothetical protein ZEAMMB73_034381 [Zea mays]
Length = 446
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 15/181 (8%)
Query: 220 RWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVG 277
+++I ARV K + R+ + + F L D +G +I +T V F ++
Sbjct: 206 KYSIVARVEVKFPIEPRFRDRQ------HFVLSDINGAKIEAITYMYETVKHFDNLLHEK 259
Query: 278 RVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
VY + K SL P + NF HL E+ L+ + V+ T P + ++++I
Sbjct: 260 HVYKMHNVKFSLHPGEFNFRHLNGPMELCLDQQTIVEPYTVPIQMAPFPKQILLNLADIA 319
Query: 336 SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQ 395
N ++VD++ +V+ ++ + + R+I+ + D G + +WGD NK
Sbjct: 320 ELPNRTLVDIMAVVVHLD----TIHRTMWGPFRKIV-IMDARGYLHIIKVWGDLLNKNAL 374
Query: 396 K 396
+
Sbjct: 375 R 375
>gi|226508478|ref|NP_001142593.1| uncharacterized protein LOC100274860 [Zea mays]
gi|195607088|gb|ACG25374.1| hypothetical protein [Zea mays]
Length = 549
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 148/379 (39%), Gaps = 31/379 (8%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSD--GGEIRVTCFNAVVD 268
+ L P++ I+ VT K R A + + D++ SD G I + +
Sbjct: 6 LTDLEPHKKHATIQVCVTRKWLFR---GANDNAPLQHVDMILSDQKGNAIYAEIPANLAN 62
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
+ IE GR+Y IS+ + A+ F + + I + V + PK +
Sbjct: 63 QKAPDIEEGRIYNISRFRVCAAKNGFKVVDGDKMIQFTFYTIVKRVIDPPTVFPKYIYRL 122
Query: 329 RHISEIES--AENNSIVDVIGIVISVNPSVPILRKNGME-TQRRILNLKDTSGRSVELTL 385
+IES + +DV+G++I V+ PI ++ + R + ++D S +++TL
Sbjct: 123 TPFDQIESNIQTKPNFLDVLGVIIQVHELTPIHIQSQLNPVLTRSIIIEDLSNTPLKITL 182
Query: 386 WGDFCNKEGQKLQEMVDVGF-FPVLSVKSGKVNDF-SGKSIGTIPSTQLFINPDFAEAHE 443
W D L ++ D P++ + G + F G + + + + NP EA
Sbjct: 183 WAD--QATSFSLHDVYDPNTKKPIIVLFVGCLPKFYKGVYLSGGSACRWYFNPTIPEAEP 240
Query: 444 LREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKN-EGLGRSEKPDWVTV----RA 498
+ T+++ A +K ++ K+ L R D+ +
Sbjct: 241 YH-----TSQQTRTIALQLPHALNHPPTIENKEAAESKSLYDLIRINPYDFPEIGYECTV 295
Query: 499 FITFIK-SDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQD 557
IT I + + Y AC +C K T + C+ CN D+ +RY L+ D
Sbjct: 296 TITEIPVENKWWYPAC------TKCFKASTPQNTVYHCNDCNW--DKYTFRYKLKFLASD 347
Query: 558 QTGLTWVTAFQESGEEILG 576
T + F +I+G
Sbjct: 348 GTETAEMFCFNNIARQIVG 366
>gi|257386633|ref|YP_003176406.1| OB-fold tRNA/helicase-type nucleic acid binding-protein
[Halomicrobium mukohataei DSM 12286]
gi|257168940|gb|ACV46699.1| nucleic acid binding OB-fold tRNA/helicase-type [Halomicrobium
mukohataei DSM 12286]
Length = 482
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 20/191 (10%)
Query: 205 PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARG-DGKVFSFDLLDSDGGEIRVTCF 263
P I AL+ Q ++ V +R ++ G +G+V + + D + G +RVT +
Sbjct: 164 PGGGSTIDALSMGQSDVDVRGVVLDTDSIRTFDRDDGSEGRVANLTIGD-ETGRVRVTLW 222
Query: 264 NAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPK 323
+ DR EI + G I G ++ + + E+ + VD EE
Sbjct: 223 DDRADRAEEI-DPGTAVEIVDGYVREREGSL-------ELHVGDHGAVDEIDEE------ 268
Query: 324 QQFSFR-HISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVE 382
+F + IE E VD+ G+V S +P R +G E Q R + ++D +G +
Sbjct: 269 --VAFEPDAAAIERVEIGETVDIAGVVRSADPKRTFDRDDGSEGQVRNVRIQDATG-DIR 325
Query: 383 LTLWGDFCNKE 393
+ LWGD +KE
Sbjct: 326 VALWGDKADKE 336
>gi|22857582|gb|AAN09856.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|31430721|gb|AAP52594.1| hypothetical protein LOC_Os10g11780 [Oryza sativa Japonica Group]
Length = 454
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 8/161 (4%)
Query: 223 IKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
I ARV+ L + + D K+F DL LD G I + + ++ +++ +VY
Sbjct: 18 IHARVSR---LWNFTDLNDDTKIFHTDLVLLDEIGTSIHAQIYPPITEKMKPLLKEEKVY 74
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIES-AEN 339
I +++ A + + + N I +T++ P FS ++ S E
Sbjct: 75 YIDSFTIRAANRTYRPVANNLMILFSKWTTLEEHINVPPHFPSITFSLTPFEDVPSLVEK 134
Query: 340 NSI-VDVIGIVISVNPSVPILRKN-GMETQRRILNLKDTSG 378
NS VD++G++ V I K+ E+ +R L ++D S
Sbjct: 135 NSFYVDIMGVITEVGAVTTIRPKSRNAESLKRTLQIRDASA 175
>gi|413949178|gb|AFW81827.1| hypothetical protein ZEAMMB73_139507 [Zea mays]
Length = 263
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 9/181 (4%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNAVV 267
PIA L+P AI+ + K + R A DG + +L+ D G I A+V
Sbjct: 5 PIAELDPKSTNAAIRVCIIRKWEFR---GATNDGPLRHVNLILADEQGTAIHAEIQAALV 61
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D +I++ +VY + + + P++ + + N I + + + + P+ +
Sbjct: 62 DDKGSLIQIDKVYELKRFRVTPSRNYYKPVDNSMMIQFTLYTQAKVVEDPPPTFPRYAYK 121
Query: 328 FRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
I + +N ++DV+GI+ + S+ + N R I LKD + S ++TL
Sbjct: 122 LTSFENIGNNVDNKTYLIDVLGILTEIG-SLHHVGYNNSNIIRDIF-LKDINNTSTKVTL 179
Query: 386 W 386
W
Sbjct: 180 W 180
>gi|414591634|tpg|DAA42205.1| TPA: hypothetical protein ZEAMMB73_964040 [Zea mays]
Length = 332
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 8/148 (5%)
Query: 252 DSDGGEIR-VTCFNAVVDRFYEIIEVGRVYLIS--KGSLKPAQKNFNHLKNEWEIFLEAT 308
D+ G +I +T + V F ++ VY + K L P + NF HL E++
Sbjct: 119 DAYGAKIEAITYVSVTVKHFNNLLHEKHVYNMHNVKFGLHPGEFNFRHLNGPMELYFNQQ 178
Query: 309 STVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQR 368
+ V+ T P + F ++ +I N ++VD++ IV+ ++ + + R
Sbjct: 179 TIVEPYTVPIQMPPFPKHIFFNLDDIAELPNKTLVDIMAIVVHMD----TIHRTMWGPFR 234
Query: 369 RILNLKDTSGRSVELTLWGDFCNKEGQK 396
+I+ + D G + +WGD NK +
Sbjct: 235 KIV-IMDARGSLHIIKVWGDLLNKNALR 261
>gi|413942291|gb|AFW74940.1| hypothetical protein ZEAMMB73_054394 [Zea mays]
Length = 268
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 247 SFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVGRVYLIS--KGSLKPAQKNFNHLKNEWEI 303
F D +G +I +T V F ++ VY + K SL P + NF HL E+
Sbjct: 47 HFIFYDINGAKIEAITYMYETVKHFDNLLHEKHVYKMHNVKFSLHPGEFNFRHLNGPMEL 106
Query: 304 FLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNG 363
L+ + V+ T +P + ++++I N ++VD++ IV+ ++ + +
Sbjct: 107 CLDQQTIVEPYTVPIQMVPFPKQILLNLADITELPNRTLVDIMAIVVHLD----TIHRTM 162
Query: 364 METQRRILNLKDTSGRSVELTLWGDFCNKEGQK 396
R+I+ + D G + +WGD NK +
Sbjct: 163 WGPFRKIV-IMDARGYLHIIKVWGDLLNKNALR 194
>gi|222478550|ref|YP_002564787.1| replication factor A [Halorubrum lacusprofundi ATCC 49239]
gi|222451452|gb|ACM55717.1| nucleic acid binding OB-fold tRNA/helicase-type [Halorubrum
lacusprofundi ATCC 49239]
Length = 501
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
G +RVT ++ D E E G V + G ++ + E+ + TV+
Sbjct: 210 GRVRVTLWDDKAD-LVEEFEAGEVVEVGDGYVRERDGDL-------ELHVGDRGTVERVD 261
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKD 375
E+ + +P+ I+E+E E VD+ G VI +P R +G E Q R + +KD
Sbjct: 262 EDVEYVPETT----DIAELEIGET---VDIGGGVIETDPKRTFDRDDGSEGQVRNVRIKD 314
Query: 376 TSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS 423
+G + + LWGD ++E E+ D F + V+ G +D +
Sbjct: 315 DTG-EIRVALWGDKADRE----IELADRVVFTDVEVQDGWQDDLEASA 357
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 82/184 (44%), Gaps = 20/184 (10%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGD---GKVFSFDLLDSDGGEIRVTCFNAVV 267
IA + P +VT+ GD+R + D G+V + D+ D+ G +RV ++ +
Sbjct: 56 IADIEPGMNDVKFLGKVTSIGDIRTFERDDEDAEEGRVCNVDVADA-SGSVRVALWDDMA 114
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
E +EVG+V + + ++ ++ L+ S + +ED + Q
Sbjct: 115 AAAEEQLEVGQVLRV----MGRPKEGYSGLE---------VSADKVEPDEDAEVDVQVLD 161
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
+ ++ ++ VD++G V+ + R +G E + L + D +GR V +TLW
Sbjct: 162 TYRVEDLSLGASD--VDLVGQVLDTDSIRTFDRDDGSEGRVANLTVGDETGR-VRVTLWD 218
Query: 388 DFCN 391
D +
Sbjct: 219 DKAD 222
>gi|414868223|tpg|DAA46780.1| TPA: hypothetical protein ZEAMMB73_640778 [Zea mays]
Length = 463
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 15/181 (8%)
Query: 220 RWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVG 277
+++I ARV K + R+ + + F L D +G +I +T V F +
Sbjct: 236 KYSIVARVEVKFPIEPRFRDRQ------HFVLSDINGAKIEAITYMYETVKHFDNFLHEK 289
Query: 278 RVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
VY + K SL P + NF HL E+ L+ + V+ T P + ++++I
Sbjct: 290 HVYKMHNVKFSLHPGEFNFRHLNGPMELCLDQQTIVEPYTVPIQMAPFPKQIILNLADIA 349
Query: 336 SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQ 395
N ++VD++ IV+ ++ + + R+I+ + D G + WGD NK
Sbjct: 350 ELPNRTLVDIMAIVVHLD----TIHRTMWGPFRKIV-IMDARGYLHIIKAWGDLLNKNAL 404
Query: 396 K 396
+
Sbjct: 405 R 405
>gi|413943366|gb|AFW76015.1| hypothetical protein ZEAMMB73_328795 [Zea mays]
Length = 378
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 128/318 (40%), Gaps = 32/318 (10%)
Query: 273 IIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHIS 332
+IE ++Y IS+ + A+ + + + I + + + + P +
Sbjct: 36 LIETNQIYDISRFRVTAAKTTYKPIDGDKMIQFTTYTIIKPASNPPPTFPLYIYQLTPFD 95
Query: 333 EIES--AENNSIVDVIGIVISVNPSVPILRKNGM--ETQRRILNLKDTSGRSVELTLWGD 388
EIES +DV+G + V ++ + G T R + ++D S +++++TLW
Sbjct: 96 EIESQIQHKTKFLDVLGTITEVT-ALKTVHIQGQLNPTIIRDVMIEDLSRKTLKITLWAK 154
Query: 389 FCNKEGQKLQEMVD-VGFFPVLSVKSGKVNDF-SGKSIGTIPSTQLFINPDFAEAHELRE 446
+Q++ D V P+L++ G + F G + + + NP EA +
Sbjct: 155 --RATSFTIQDVYDPVSKKPILALFVGCLPKFYKGVYLSGGAACHWYFNPTIPEAEAYQN 212
Query: 447 WFDSGGKNAATVSISREIAAGGAKNEI------HKTVSQIKNEGLGRSEKPDW-VTVRAF 499
GG+ T+ + A HKT+ Q+ + + PD A
Sbjct: 213 --RRGGE---TIQLHLPTQPKHALQTFQPPTIEHKTLEQLLT--MNPYDYPDTGYECTAT 265
Query: 500 ITFI-KSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQ 558
IT I S+++ Y +C +C +K T + CD C + D ++Y L+ + D
Sbjct: 266 ITEIDTSNTWWYPSC------TKCGRKTTPHNIAYYCDWC--KWDGYKFKYKLKFRASDA 317
Query: 559 TGLTWVTAFQESGEEILG 576
T + + F I+G
Sbjct: 318 TAMAQMFCFDNIARYIVG 335
>gi|359493963|ref|XP_003634702.1| PREDICTED: replication factor A protein 1-like [Vitis vinifera]
gi|302143225|emb|CBI20520.3| unnamed protein product [Vitis vinifera]
Length = 75
Score = 48.9 bits (115), Expect = 0.008, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 533 WQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYE 588
+ C+ C + DEC RY++ ++ D +G W++ F E E I G A EL LK +
Sbjct: 9 YWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLFNEQAERIFGYSADELDKLKSQ 64
>gi|448497562|ref|ZP_21610515.1| replication factor A [Halorubrum coriense DSM 10284]
gi|445699793|gb|ELZ51813.1| replication factor A [Halorubrum coriense DSM 10284]
Length = 493
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 22/192 (11%)
Query: 233 LRRYNNARG-DGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQ 291
+R ++ G +G+V + L D G +RVT ++ D E G V + G ++
Sbjct: 187 IRTFDRDDGSEGRVANLTLGDE-TGRVRVTLWDGKAD-LAEEFAAGEVVEVGDGYVRERD 244
Query: 292 KNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVIS 351
+ E+ + TV+ E+ + +P+ ++I E + VDV G VI
Sbjct: 245 GDL-------ELHVGDRGTVERVDEDVEYVPE-------TTDIADLEIDQTVDVGGGVIE 290
Query: 352 VNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSV 411
+P R +G E Q R + +KD +G + + LWGD ++E E+ D F + V
Sbjct: 291 TDPKRTFDRDDGSEGQVRNVRIKDETG-EIRVALWGDKADRE----IELADRVVFTDVEV 345
Query: 412 KSGKVNDFSGKS 423
+ G +D +
Sbjct: 346 QDGWQDDLEASA 357
>gi|414888072|tpg|DAA64086.1| TPA: hypothetical protein ZEAMMB73_996720 [Zea mays]
Length = 238
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 86/186 (46%), Gaps = 15/186 (8%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTC----FNA 265
P++AL ++ +V K + R A +G + D++ +D + C F A
Sbjct: 5 PLSALTLQDRNAEVQIQVHRKWEFR---GAVDNGPILHIDMILTDCTGNAIHCQIPSFLA 61
Query: 266 VV--DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPK 323
D F +VG++Y +++ S+ A+ + + + ++++ +T++LC P
Sbjct: 62 ATRGDEF----QVGKIYKMTRFSVARAKSTYKPVDGDLMLYVKPYTTLELCHTSPSGFPL 117
Query: 324 QQFSFRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSV 381
+ +I+ +N+ DV+GI+ ++ P+ + + R + +K+ S +
Sbjct: 118 YVYHLTSYDKIDPDGSNARNFHDVLGIITEISAIKPVGNAHIPSSYNRHVLIKNLSDDIL 177
Query: 382 ELTLWG 387
++TLWG
Sbjct: 178 KITLWG 183
>gi|297719755|ref|NP_001172239.1| Os01g0223400 [Oryza sativa Japonica Group]
gi|56783998|dbj|BAD81453.1| unknown protein [Oryza sativa Japonica Group]
gi|56784071|dbj|BAD81308.1| unknown protein [Oryza sativa Japonica Group]
gi|255673012|dbj|BAH90969.1| Os01g0223400 [Oryza sativa Japonica Group]
Length = 249
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 91/222 (40%), Gaps = 25/222 (11%)
Query: 236 YNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKN 293
+ + + D K+ F L +D G I + + F II G+VY I ++ +
Sbjct: 38 FCDQKDDDKILHFGLVLIDEKGTSIAAQIYPPCDEIFRPIITEGKVYYIKYFRVRKCNRQ 97
Query: 294 FNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIES--AENNSIVDVIGIVIS 351
+ + N I+ + ++ + IP +S + S + +S D+IGI+
Sbjct: 98 YKPVDNCMSIYFTRWTKLEERVDPPAEIPLYTYSLSPFGGLRSRVGKKDSFTDIIGIITQ 157
Query: 352 VNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNK--------EGQKLQEMVDV 403
++P P+ T +R + +++T + + LWG+ GQK ++V
Sbjct: 158 LSPVTPL-----QGTVKRSVFIRNTDNAILNVALWGERATSFPADEVFVAGQKEPQIVI- 211
Query: 404 GFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHELR 445
F L G V+ SG S + + +IN D E LR
Sbjct: 212 -FVGTLVKGYGDVS-LSGNS-----ACKWYINADTPEVISLR 246
>gi|448451265|ref|ZP_21592748.1| replication factor A [Halorubrum litoreum JCM 13561]
gi|445810699|gb|EMA60715.1| replication factor A [Halorubrum litoreum JCM 13561]
Length = 512
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
G +RVT ++ D E E G+V + G ++ + E+ + TV+
Sbjct: 221 GRVRVTLWDGKAD-LAEEFEAGQVVEVGDGYVRERDGDL-------ELHVGDRGTVERVD 272
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKD 375
E+ + +P+ ++I E VDV G VI +P R +G E Q R + +KD
Sbjct: 273 EDVEYVPE-------TTDIADLEIGETVDVGGGVIETDPVRTFDRDDGSEGQVRNVRIKD 325
Query: 376 TSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS 423
+G + + LWGD ++E E+ D F + ++ G +D +
Sbjct: 326 ETG-EIRVALWGDKADRE----IELADRVVFTDVEIQDGWQDDLEASA 368
>gi|448427497|ref|ZP_21583812.1| replication factor A [Halorubrum terrestre JCM 10247]
gi|445678184|gb|ELZ30678.1| replication factor A [Halorubrum terrestre JCM 10247]
Length = 512
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
G +RVT ++ D E E G+V + G ++ + E+ + TV+
Sbjct: 221 GRVRVTLWDGKAD-LAEEFEAGQVVEVGDGYVRERDGDL-------ELHVGDRGTVERVD 272
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKD 375
E+ + +P+ ++I E VDV G VI +P R +G E Q R + +KD
Sbjct: 273 EDVEYVPE-------TTDIADLEIGETVDVGGGVIETDPVRTFDRDDGSEGQVRNVRIKD 325
Query: 376 TSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS 423
+G + + LWGD ++E E+ D F + ++ G +D +
Sbjct: 326 ETG-EIRVALWGDKADRE----IELADRVVFTDVEIQDGWQDDLEASA 368
>gi|354506995|ref|XP_003515544.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Cricetulus griseus]
Length = 90
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 11 SLINGGDVNSKPLVQVMDIKLI--GSTQERYRFLISDSVSTQHA-MLATQLNDRVKTGQV 67
+++ GD + KP++QV++I+ I G++ RYR L+SD ++T + MLATQLN V+ ++
Sbjct: 12 AIMQQGDTSIKPILQVINIRPIATGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEGEKL 71
Query: 68 KKGSVVQLIDYICSTVQN 85
V Q+ +I +T+++
Sbjct: 72 ASNCVCQVNRFIVNTLKD 89
>gi|414877715|tpg|DAA54846.1| TPA: hypothetical protein ZEAMMB73_535318 [Zea mays]
Length = 305
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 15/181 (8%)
Query: 220 RWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVG 277
+++I ARV K + R+++ + F L D +G +I +T V F ++
Sbjct: 78 KYSIVARVEVKFPIEPRFHDRQ------HFVLSDINGAKIEAITYMYETVKHFDNLLHEK 131
Query: 278 RVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
VY + K SL P + NF HL ++ L + V+ T P + F ++++I
Sbjct: 132 HVYKMHNVKFSLHPGEFNFRHLNGPMKLCLNQQAIVEPYTFPIQMTPFPKQIFLNLADIV 191
Query: 336 SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQ 395
N ++VD++ IV+ ++ + + R+I+ + D G + +WGD NK
Sbjct: 192 ELPNMTLVDIMAIVVHMD----TIHRTMWGPFRKIV-IMDARGSLHIIKVWGDLLNKNAL 246
Query: 396 K 396
+
Sbjct: 247 R 247
>gi|402216670|gb|EJT96754.1| nucleic acid-binding protein [Dacryopinax sp. DJM-731 SS1]
Length = 430
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 154/399 (38%), Gaps = 59/399 (14%)
Query: 258 IRVTCFNA-VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE 316
++V F V+D + VG V + L+ Q + W L + VD +
Sbjct: 1 MKVLTFEEEVIDGLLKNTAVGVVMRLESVRLQETQAKYL-----WNGLLPIEAVVDHNSR 55
Query: 317 -----EDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGM------- 364
+D IP IS + + + + V+VIG+V+ V + K +
Sbjct: 56 IEFPLQDHGIPPLSLELTKISLLRAMKVGTEVNVIGVVLHVGEVEAMSEKKRVAGKSGDG 115
Query: 365 -----------ETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKS 413
E RR + L D S V + LW D + V +L +K
Sbjct: 116 ESESEEEDPKGERMRREVQLVDDSAHVVRIALWKDRATS--------MAVKRGSILLLKK 167
Query: 414 GKVNDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATV-SISREIAAG-GAKN 471
+ G S+ T++ +P AE L+ W+++ N T IS +AG G
Sbjct: 168 VVIAAHGGISLNVHEKTKVDKDPKVAEGTSLKNWYNNLASNPQTFRHISSGYSAGSGLFT 227
Query: 472 EIHK-----TVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKV 526
+I T+ +++ LG S + D V I + ++ Y AC + CNK +
Sbjct: 228 DIEPRSSVLTIPEVQKSNLGTSSRVDTFNVEGRIQVVDWNA-VYEACR----NTHCNKSI 282
Query: 527 TQSGNRWQCDRCNQEIDECDYR---YLLQAQI-QDQTGLTWVTAFQESGEEILGCPAKEL 582
+S CD E D R Y L+ I QD+ V F +++L A E+
Sbjct: 283 EKS----PCDIEGHEDMSDDNRRFCYHLKLTIGQDRRRSIDVPVFTPLADKMLEEDATEV 338
Query: 583 YMLKYELQDDVRFGEIIRSRVFNQYLFRLKIKEELYGDE 621
+K ++ E++ + + ++ F ++ +L+ +E
Sbjct: 339 --VKKRDHTPGQYDEVLGALLKTKWRFTIQACTQLWKNE 375
>gi|413956456|gb|AFW89105.1| hypothetical protein ZEAMMB73_316315 [Zea mays]
Length = 286
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 247 SFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVGRVYLIS--KGSLKPAQKNFNHLKNEWEI 303
F L D +G +I +T V F ++ VY + K SL P + NF HL E+
Sbjct: 68 HFVLSDINGAKIEAITYMYETVKHFDNLLHEKHVYKMHNVKFSLHPGEFNFRHLNGPMEL 127
Query: 304 FLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNG 363
L+ + V+ T P + ++++I N ++VD++ IV+ ++ + +
Sbjct: 128 CLDQQTIVEPYTVPIQMAPFPKQILLNLADIAELPNRTLVDIMAIVVHLD----TIHRTM 183
Query: 364 METQRRILNLKDTSGRSVELTLWGDFCNKEGQK 396
R+I+ + D G + +WGD NK +
Sbjct: 184 WGPFRKIV-IMDARGYLHIIKVWGDLLNKNALR 215
>gi|413946437|gb|AFW79086.1| hypothetical protein ZEAMMB73_648496 [Zea mays]
Length = 277
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 15/181 (8%)
Query: 220 RWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVG 277
+++I ARV K + R+ + + F L D +G +I +T V F ++
Sbjct: 37 KYSIVARVEVKFPIEPRFRDRQ------HFVLSDINGAKIEAITYMYETVKHFDNLLHEK 90
Query: 278 RVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
VY + K SL P + NF HL E+ L+ + V+ T P + ++++I
Sbjct: 91 HVYKMHNVKFSLHPGEFNFRHLNGPMELCLDQQTIVEPYTVPIQMAPFPKQILLNLADIA 150
Query: 336 SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQ 395
N ++VD++ +V+ ++ + + R+I+ + D G + +WGD NK
Sbjct: 151 ELPNRTLVDIMAVVVHLD----TIHRTMWGPFRKIV-IMDARGYLHIIKVWGDLLNKNAL 205
Query: 396 K 396
+
Sbjct: 206 R 206
>gi|413933866|gb|AFW68417.1| hypothetical protein ZEAMMB73_453988 [Zea mays]
Length = 277
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 15/181 (8%)
Query: 220 RWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVG 277
+++I ARV K + R+ + + F L D +G +I +T V F ++
Sbjct: 37 KYSIVARVEVKFPIEPRFRDRQ------HFVLSDINGAKIEAITYMYETVKHFDNLLHEK 90
Query: 278 RVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
VY + K SL P + NF HL E+ L+ + V+ T P + ++++I
Sbjct: 91 HVYKMHNVKFSLHPGEFNFRHLNGPMELCLDQQTIVEPYTVPIQMAPFPKQILLNLADIA 150
Query: 336 SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQ 395
N ++VD++ +V+ ++ + + R+I+ + D G + +WGD NK
Sbjct: 151 ELPNRTLVDIMAVVVHLD----TIHRTMWGPFRKIV-IMDARGYLHIIKVWGDLLNKNAL 205
Query: 396 K 396
+
Sbjct: 206 R 206
>gi|413915876|gb|AFW55808.1| hypothetical protein ZEAMMB73_980277 [Zea mays]
Length = 421
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 8/152 (5%)
Query: 248 FDLLDSDGGEIR-VTCFNAVVDRFYEIIEVGRVYLIS--KGSLKPAQKNFNHLKNEWEIF 304
F L D +G +I +T V F ++ VY + K SL P + NF HL E+
Sbjct: 204 FVLSDINGAKIEAITYMYETVKHFDNLLHEKHVYKMHNVKFSLHPGEFNFRHLNGPMELC 263
Query: 305 LEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGM 364
L+ + V+ T P + ++++I N ++VD++ +V+ ++ + +
Sbjct: 264 LDQQTIVEPYTVPIQMAPFPKQILLNLADIAELLNRTLVDIMAVVVHLD----TIHRTMW 319
Query: 365 ETQRRILNLKDTSGRSVELTLWGDFCNKEGQK 396
R+I+ + D G + +WGD NK +
Sbjct: 320 GPFRKIV-IMDARGYLHIIKVWGDLLNKNALR 350
>gi|448482817|ref|ZP_21605588.1| replication factor A [Halorubrum arcis JCM 13916]
gi|445821103|gb|EMA70899.1| replication factor A [Halorubrum arcis JCM 13916]
Length = 501
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 20/168 (11%)
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
G +RVT ++ D E E G V + G ++ + E+ + TV+
Sbjct: 210 GRVRVTLWDGKAD-LAEEFEAGEVVEVGDGYVRERDGDL-------ELHVGDRGTVERVD 261
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKD 375
E+ + +P+ ++I E VDV G VI +P R +G E Q R + +KD
Sbjct: 262 EDVEYVPE-------TTDIADLEIGETVDVGGGVIETDPVRTFDRDDGSEGQVRNVRIKD 314
Query: 376 TSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS 423
+G + + LWGD ++E E+ D F + ++ G +D +
Sbjct: 315 ETG-EIRVALWGDKADRE----IELADRVVFTDVEIQDGWQDDLEASA 357
>gi|321453826|gb|EFX65027.1| hypothetical protein DAPPUDRAFT_333603 [Daphnia pulex]
Length = 284
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 23/181 (12%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I + L+PY RW I+ RV + R +GD +F F LLDS G ++ F
Sbjct: 37 FIDVNKLSPYLRRWKIRGRVCR---ISRLFPFKGDRNMFYFGLLDS-SGLLKNKAFGEDA 92
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
+++Y I N LK +E+ L S V+ E+DD+ P+ +
Sbjct: 93 EKYYGI----------------NPNNIFPLK--FEVILAKESEVERL-EQDDTFPRLKVV 133
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
+ ++ + + D+ IV V + + + + + + G +V++TLW
Sbjct: 134 KYDLKKVRDLPHGTFFDIEVIVYKAGCVVDVRKGELRKLELEVFDASMKPGETVKVTLWN 193
Query: 388 D 388
D
Sbjct: 194 D 194
>gi|261349815|ref|ZP_05975232.1| replication factor A related protein [Methanobrevibacter smithii
DSM 2374]
gi|288860599|gb|EFC92897.1| replication factor A related protein [Methanobrevibacter smithii
DSM 2374]
Length = 800
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 111/271 (40%), Gaps = 52/271 (19%)
Query: 320 SIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGR 379
+I +S + I+++E E++ + V G +I + R +G + + L + D SG
Sbjct: 528 TIETMLYSHKSIADVE--EDDEGIIVTGRIIESSDVREFDRTDGSKGYVKSLEIADNSG- 584
Query: 380 SVELTLWGDFCNKE-----GQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
S+ +TLW + KE K Q+ P +S ++ + I ST + +
Sbjct: 585 SINVTLWNENAKKEWNVGDAIKFQD-------PQISFRNDSL------EINVSRSTSI-L 630
Query: 435 NPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWV 494
PD +E +L + + SI + KT+ ++N+ V
Sbjct: 631 EPDESEIDDLPTY------DELKESIY-----------VPKTIEALENDDRN-------V 666
Query: 495 TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQ 554
+ + + + T CP C V QS + + C C + IDE Y ++ A+
Sbjct: 667 RITGTLKEVFGNKILITKCP------SCGNTVDQSSDDFVCSFCGEPIDEPRYLLMVPAR 720
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKELYML 585
++D TG +T F EE+L +++ L
Sbjct: 721 LEDDTGEISITFFDNLAEELLDMKKEDIINL 751
>gi|414878207|tpg|DAA55338.1| TPA: hypothetical protein ZEAMMB73_182758 [Zea mays]
Length = 353
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 247 SFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVGRVYLIS--KGSLKPAQKNFNHLKNEWEI 303
F L D +G +I +T V F ++ VY + K SL P + NF HL E+
Sbjct: 59 HFVLSDINGAKIEAITYMYETVKHFDNLLHEKHVYKMHNVKFSLHPGEFNFRHLNGPMEL 118
Query: 304 FLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNG 363
L+ + V+ T P + ++++I N ++VD++ IV+ ++ + +
Sbjct: 119 CLDQQTIVEPYTVPIQMAPFPKQILLNLADIAELPNRTLVDIMAIVVHLD----TIHRTM 174
Query: 364 METQRRILNLKDTSGRSVELTLWGDFCNKEGQK 396
R+I+ + D G + +WGD NK +
Sbjct: 175 WGPFRKIV-IMDARGYLHIIKVWGDLLNKNALR 206
>gi|448513831|ref|ZP_21616762.1| replication factor A [Halorubrum distributum JCM 9100]
gi|448526659|ref|ZP_21619928.1| replication factor A [Halorubrum distributum JCM 10118]
gi|445692984|gb|ELZ45147.1| replication factor A [Halorubrum distributum JCM 9100]
gi|445698886|gb|ELZ50924.1| replication factor A [Halorubrum distributum JCM 10118]
Length = 512
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
G +RVT ++ D E E G+V + G ++ + E+ + TV+
Sbjct: 221 GRVRVTLWDGKAD-LAEEFEAGQVVEVGDGYVRERDGDL-------ELHVGDRGTVERVD 272
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKD 375
E+ + +P+ +++ E VDV G VI +P R +G E Q R + +KD
Sbjct: 273 EDVEYVPE-------TTDVADLEIGETVDVGGGVIETDPVRTFDRDDGSEGQVRNVRIKD 325
Query: 376 TSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS 423
+G + + LWGD ++E E+ D F + ++ G +D +
Sbjct: 326 ETG-EIRVALWGDKADRE----IELADRVVFTDVEIQDGWQDDLEASA 368
>gi|224138504|ref|XP_002326619.1| predicted protein [Populus trichocarpa]
gi|222833941|gb|EEE72418.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 103/234 (44%), Gaps = 31/234 (13%)
Query: 321 IPKQQFSFRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSG 378
+P+ F+F + + + E S ++DV+G + ++ P +L + T ++ +++ G
Sbjct: 111 VPRHYFNFIDFAHLLTKEKGSRTLIDVLGRLKAIQPLEQVLVRGQDITDKKEFIIENIMG 170
Query: 379 RSVELTLWGDFCNK-EGQKLQEMVDVGFFPVLSVKSG-KVNDFSGK-SIGTIPSTQLFIN 435
+ +TLWGD + L E + P++ V +G +V +F GK ++ + ++ + N
Sbjct: 171 DELRITLWGDVAKSFDDFVLHEHTN----PIIVVFAGFRVTEFKGKPNLASTVASFWYFN 226
Query: 436 PDFAEAHELR--------EWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGR 487
P+ E + E + A SI ++I NE KT+ +I
Sbjct: 227 PEIPEILPYKHHYNQLPVEVYQLPASMNAVRSIEQQI------NENRKTIKEILCMD-PY 279
Query: 488 SEKPDWVTVRAFIT-FIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQ 540
K + T +A I + + Y +CPL C K ++ G ++C N+
Sbjct: 280 EHKSERCTYKASIADYDLHRGWWYQSCPL------CTKSLSDKGTIFRCIEHNE 327
>gi|413939632|gb|AFW74183.1| hypothetical protein ZEAMMB73_040811 [Zea mays]
Length = 402
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 15/179 (8%)
Query: 220 RWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVG 277
+++I ARV K + R+ + + F L D +G +I +T V F ++
Sbjct: 162 KYSIVARVEVKFPIEPRFRDRQ------HFVLSDINGAKIEAITYMYETVKHFDNLLHEK 215
Query: 278 RVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
VY + K SL P + NF HL E+ L+ + V+ T P + ++ +I
Sbjct: 216 HVYKMHNVKFSLHPGEFNFRHLNGPMELCLDQQTIVEPYTVPIQMAPFPKQILLNLVDIA 275
Query: 336 SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEG 394
N ++VD++ +V+ ++ + + R+I+ + D G + +WGD NK
Sbjct: 276 ELPNRTLVDIMAVVVHLD----TIHRTMWGPFRKIV-IMDARGYLHIIKVWGDLLNKNA 329
>gi|413923940|gb|AFW63872.1| hypothetical protein ZEAMMB73_151869 [Zea mays]
Length = 414
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 94/250 (37%), Gaps = 30/250 (12%)
Query: 344 DVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG---------DFCNKEG 394
DV+G++ +NP P L T R + +K+TS S+++TLWG D N+
Sbjct: 31 DVLGMLTQINP--PHLIGYNNSTIIRDIFIKNTSDMSLKITLWGNQASSFSISDVYNQSN 88
Query: 395 QKLQEMVDVGFFPVLSVKSGKVNDFSGKS-IGTIPSTQLFINPDFAEAHELREWFDSGG- 452
+ ++ VGF F G+ + + ++ + NP EA +
Sbjct: 89 NQPIVILLVGFL---------AKRFKGQPYLSSTTASSWYFNPGIPEAQTYYNRLQNNDL 139
Query: 453 KNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTA 512
+ + EI N KTV ++ N L + +++ + Y +
Sbjct: 140 QQIQPTAAEEEILLSQPPNLDQKTVEELLNIDLDMFPPEGYRCTVTISRIVQNSKWWYPS 199
Query: 513 CPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGE 572
C +C+K +Q+ + C C + ++RY L D T F
Sbjct: 200 C------SRCHKSSSQTSTGYHCTSCG--CTDINFRYKLNFIATDGTCEAEFFCFDSIAR 251
Query: 573 EILGCPAKEL 582
+I+G P L
Sbjct: 252 KIVGKPCDNL 261
>gi|391333730|ref|XP_003741263.1| PREDICTED: uncharacterized protein LOC100898546 [Metaseiulus
occidentalis]
Length = 183
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 18/139 (12%)
Query: 319 DSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSG 378
D +P+ Q +S++ + NS++D+ ++ V P +G Q++I+ + D S
Sbjct: 43 DDLPEIQSLTTILSDLATKPANSVIDIRVVIFDVRPPQSFTCHDGTSRQKQIITVLDKSM 102
Query: 379 RSVELTLWGDFC----NKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG-KSIGTIPSTQLF 433
R + + +W DF +KEGQ + ++ ++ D+ G + + + +T L
Sbjct: 103 RMINVGVWSDFVGKFDDKEGQAVIN------------RNLQIRDYKGVRQLSSTSNTMLA 150
Query: 434 INPDFAEAHELREWFDSGG 452
D E EL+ WF++ G
Sbjct: 151 AITD-TETRELQTWFETTG 168
>gi|297724803|ref|NP_001174765.1| Os06g0329200 [Oryza sativa Japonica Group]
gi|255677008|dbj|BAH93493.1| Os06g0329200 [Oryza sativa Japonica Group]
Length = 225
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Query: 223 IKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
IK R++ D N+ + K++ +L LD G I V + ++ ++F ++++ G+VY
Sbjct: 81 IKTRLSRLWDFHDIND---EEKIYHTELVLLDETGASIHVQIYPSLRNKFKDLLQQGKVY 137
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIES 336
I S++ A + + + N I +T++ C E D+ P FS ++ S
Sbjct: 138 YIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSITFSLTPFQDVPS 193
>gi|414877314|tpg|DAA54445.1| TPA: hypothetical protein ZEAMMB73_823790 [Zea mays]
Length = 277
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 8/153 (5%)
Query: 247 SFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVGRVYLIS--KGSLKPAQKNFNHLKNEWEI 303
F L D +G +I +T V F ++ VY + K SL P + NF HL E+
Sbjct: 59 HFVLSDINGSKIEAITYMYETVKHFDNLLHEKHVYKMHNVKFSLHPGEFNFRHLNGPMEL 118
Query: 304 FLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNG 363
L+ + V+ T P + ++++I N ++VD++ +V+ ++ +++
Sbjct: 119 CLDQQTIVEPYTVPIQMAPFPKQILLNLADIAELPNRTLVDIMAVVVHLD----TIQRTM 174
Query: 364 METQRRILNLKDTSGRSVELTLWGDFCNKEGQK 396
R+I+ + D G + +WGD NK +
Sbjct: 175 WGPFRKIV-IMDARGYLHIIKVWGDLLNKNALR 206
>gi|448684242|ref|ZP_21692707.1| replication factor A [Haloarcula japonica DSM 6131]
gi|445783115|gb|EMA33951.1| replication factor A [Haloarcula japonica DSM 6131]
Length = 486
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 20/191 (10%)
Query: 205 PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARG-DGKVFSFDLLDSDGGEIRVTCF 263
P I AL Q +++ V +R ++ G +G+V + L D G IRVT +
Sbjct: 159 PGAGSSIDALTMGQSDVSLRGLVLDTDSIRTFDRDDGSEGRVSNLTLGDE-TGRIRVTLW 217
Query: 264 NAVVDRFYEIIEVGRVYLISKGSLKPAQKNFN-HLKNEWEIFLEATSTVDLCTEEDDSIP 322
+ DR E+ + G I G ++ + H+ ++ + D E D+ P
Sbjct: 218 DDRADRAEEL-DAGAAVEIIDGYVRERDGSLELHVGDQGAV----DEVEDDVAFEPDANP 272
Query: 323 KQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVE 382
ISE+E E VD+ G+V S +P R +G E Q R + ++D +G +
Sbjct: 273 --------ISEVELEET---VDIAGVVRSADPKRTFDRDDGSEGQVRNVRIQDATG-DIR 320
Query: 383 LTLWGDFCNKE 393
+ LWGD +K+
Sbjct: 321 VALWGDKADKD 331
>gi|76800811|ref|YP_325819.1| replication factor A [Natronomonas pharaonis DSM 2160]
gi|76556676|emb|CAI48248.1| replication protein A [Natronomonas pharaonis DSM 2160]
Length = 467
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 233 LRRYNNARG-DGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQ 291
+R ++ G +G+V + L D G+IRVT ++ DR E +E G+ I G ++ +
Sbjct: 187 VRTFDRDDGSEGRVSNLTLGDE-TGKIRVTLWDEQADR-AEALEAGQSVEIVDGYVRERE 244
Query: 292 KNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVIS 351
+ E+ + S +D E + +P ++I+S + VD+ G+V S
Sbjct: 245 GDL-------ELHAGSRSDIDELDESVEFVPD-------ATDIDSIAIDETVDIAGVVRS 290
Query: 352 VNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCN 391
+P R +G E Q R + L+D +G + + LWG+ +
Sbjct: 291 ADPKRTFDRDDGSEGQVRNVRLQDNTG-DIRVALWGEKAD 329
>gi|413923939|gb|AFW63871.1| hypothetical protein ZEAMMB73_151869 [Zea mays]
Length = 371
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 94/250 (37%), Gaps = 30/250 (12%)
Query: 344 DVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG---------DFCNKEG 394
DV+G++ +NP P L T R + +K+TS S+++TLWG D N+
Sbjct: 31 DVLGMLTQINP--PHLIGYNNSTIIRDIFIKNTSDMSLKITLWGNQASSFSISDVYNQSN 88
Query: 395 QKLQEMVDVGFFPVLSVKSGKVNDFSGKS-IGTIPSTQLFINPDFAEAHELREWFDSGG- 452
+ ++ VGF F G+ + + ++ + NP EA +
Sbjct: 89 NQPIVILLVGFL---------AKRFKGQPYLSSTTASSWYFNPGIPEAQTYYNRLQNNDL 139
Query: 453 KNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTA 512
+ + EI N KTV ++ N L + +++ + Y +
Sbjct: 140 QQIQPTAAEEEILLSQPPNLDQKTVEELLNIDLDMFPPEGYRCTVTISRIVQNSKWWYPS 199
Query: 513 CPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGE 572
C +C+K +Q+ + C C + ++RY L D T F
Sbjct: 200 C------SRCHKSSSQTSTGYHCTSCG--CTDINFRYKLNFIATDGTCEAEFFCFDSIAR 251
Query: 573 EILGCPAKEL 582
+I+G P L
Sbjct: 252 KIVGKPCDNL 261
>gi|148643392|ref|YP_001273905.1| replication factor A [Methanobrevibacter smithii ATCC 35061]
gi|148552409|gb|ABQ87537.1| ssDNA-binding protein [Methanobrevibacter smithii ATCC 35061]
Length = 793
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 111/271 (40%), Gaps = 52/271 (19%)
Query: 320 SIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGR 379
+I +S + I+++E E++ + V G +I + R +G + + L + D SG
Sbjct: 521 TIETMLYSHKSIADVE--EDDEGIIVTGRIIESSDVREFDRTDGSKGYVKSLEIADNSG- 577
Query: 380 SVELTLWGDFCNKE-----GQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
S+ +TLW + KE K Q+ P +S ++ + I ST + +
Sbjct: 578 SINVTLWNENAKKEWNVGDAIKFQD-------PQISFRNDSL------EINVSRSTSI-L 623
Query: 435 NPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWV 494
PD +E +L + + SI + KT+ ++++ V
Sbjct: 624 EPDESEIDDLPTY------DELKESIY-----------VPKTIEALEDDDRN-------V 659
Query: 495 TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQ 554
+ + + + T CP C V QS + + C C + IDE Y ++ A+
Sbjct: 660 RITGTLKEVFGNKILITKCP------SCGNTVDQSSDDFVCSFCGEPIDEPRYLLMVPAR 713
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKELYML 585
++D TG +T F EE+L +E+ L
Sbjct: 714 LEDDTGEISITFFDNLAEELLDMKKEEIINL 744
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 28/246 (11%)
Query: 203 EAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTC 262
E +I I L P + + I AR+ R Y +GKV S +L D+ GEI T
Sbjct: 173 EYEEKITDIEDLVP-ETKANIIARIVRIPTPRTYEKNGKEGKVTSLELKDA-TGEISYTL 230
Query: 263 FNAVVDRFYEI-IEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSI 321
+N VD E+ ++ G I ++ ++N W+ + D +
Sbjct: 231 WNKNVDLIDELGLDAGDSVKILGAQVR--ERNGELSLTHWD---------GRIIKGDFDV 279
Query: 322 PKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK-NGMETQRRILNLKDTSGRS 380
P+ F I +I E N+I + G++ + RK +G E + R ++ D +G S
Sbjct: 280 PEFTQEFIKIGDI--TEQNNIA-IKGVISKLQDIRTFTRKSDGSEGKLRNFDVSDDTG-S 335
Query: 381 VELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDF--SGKSIGTIPSTQLFINPDF 438
+ T+WG+ + ++ G + + +D+ SG S+ T +TQL INP+
Sbjct: 336 IRTTIWGNDTDI-------LLTKGDIVKIIGADARFDDYTDSGYSLNTNFNTQLSINPEN 388
Query: 439 AEAHEL 444
A EL
Sbjct: 389 LSAEEL 394
>gi|300681310|emb|CAZ96018.1| conserved hypothetical protein [Saccharum hybrid cultivar]
Length = 508
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
L D+ G + + ++ + +VG+VY++ K + A+K++ + I + +
Sbjct: 45 LADAQGHAMYAEIADDLIGEKACLFDVGKVYVLKKFVVNNAKKSYRAVDRNLLINISQHT 104
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIESAE-NNSIVDVIGIVISVNPSVPILRKNGMETQR 368
TV + SIP+ + + I+ + D IG +I + + KN + +
Sbjct: 105 TVQVVPNPPSSIPEYIYRITPLPAIKPVRFVYNYTDTIGYLIKYKAAHTFVPKNKEKAKT 164
Query: 369 -RILNLKDTSGRSVELTLWG---------DFCNKEGQKLQEMVDVGFFPVLSVKSGKVND 418
R + +KD S +++TLWG D ++E L + VG +P + +
Sbjct: 165 LREIYIKDLSDNVMQVTLWGDQATGFNISDIYDREAGNLIVCLIVGCYPREDLMNNNKPC 224
Query: 419 FSGKSIGTIPSTQLFINPDFAE 440
SG P+ ++NP+ E
Sbjct: 225 LSGS-----PACSCYLNPNIPE 241
>gi|414590353|tpg|DAA40924.1| TPA: hypothetical protein ZEAMMB73_767937 [Zea mays]
Length = 519
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 127/324 (39%), Gaps = 44/324 (13%)
Query: 273 IIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHIS 332
+IE ++Y IS+ + A+ + + + I + + + + P +
Sbjct: 26 LIETNQIYDISRFRVTAAKTAYKPIDGDKMIQFTIYTIIKPGSNPPPTFPLYIYQLTPFD 85
Query: 333 EIESA--ENNSIVDVIGIVISVNPSVPILRKNGMETQR-----RILNLKDTSGRSVELTL 385
EIES +DV+G + V L+ +E Q R + ++D S +++++TL
Sbjct: 86 EIESQIQHKTKFLDVLGTITEVT----ALKTVHIEGQLSPTIIRDVMIEDLSRKTLKITL 141
Query: 386 WGDFCNKEGQKLQEMVD-VGFFPVLSVKSGKVNDF-SGKSIGTIPSTQLFINPDFAEAHE 443
W +Q + D V P+L++ G + F G + + + NP EA
Sbjct: 142 WAK--RATSFTIQNVYDPVSKKPILALFVGCLPKFYKGVYLSGGAACHWYFNPAIPEAEA 199
Query: 444 LREWFDSGGKNAATVSISREIAAGGAKNEI------HKTVSQIKNEGLGRSEKPDW---- 493
+ GG+ T+ + A HKT+ Q+ + + PD
Sbjct: 200 YQN--RHGGE---TIQLHLPTQPEHALQTFQPPTIEHKTLEQLLT--MNPYDYPDTGYEC 252
Query: 494 -VTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQ 552
VTV T S+++ Y +C +C +K T + CD C + D ++Y L+
Sbjct: 253 TVTVTEIDT---SNTWWYPSC------TKCGRKTTPHNTTYYCDLC--KWDGYKFKYKLK 301
Query: 553 AQIQDQTGLTWVTAFQESGEEILG 576
+ D T + + F I+G
Sbjct: 302 FRASDATAIAQMFCFDNIARYIVG 325
>gi|297596244|ref|NP_001042233.2| Os01g0184300 [Oryza sativa Japonica Group]
gi|255672951|dbj|BAF04147.2| Os01g0184300 [Oryza sativa Japonica Group]
Length = 168
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 61/134 (45%), Gaps = 7/134 (5%)
Query: 223 IKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVDRFYEIIEVGRVY 280
IKARV+ D N+ D K+ DL LD G I + V+ +++ G+VY
Sbjct: 18 IKARVSRLWDFHDLND---DRKIVHTDLVLLDETGNSIHAQMYQHVIVNLKPLLQEGKVY 74
Query: 281 LISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENN 340
I +++ A + + + + I +T++ C + P FS ++ S +
Sbjct: 75 YIDSFTVRYANRTYRPVAHSLMILFTKWTTLEECVDVPADFPAITFSLTPFGDVPSLVDK 134
Query: 341 SI--VDVIGIVISV 352
+I VD++G++ +
Sbjct: 135 NIFYVDIMGVIAEI 148
>gi|356545383|ref|XP_003541123.1| PREDICTED: uncharacterized protein LOC100814355 [Glycine max]
Length = 570
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 66/143 (46%), Gaps = 9/143 (6%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
++DSDG +I V C + + ++ G Y++ + + + +++ +
Sbjct: 377 IVDSDGDQIHVVCKQDQLKTWKMDLKEGCTYVMHNFRVSKNDGQYRVCDHPYKLTFIEVT 436
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQ 367
V C E D +P + + F S++ +++ S +VD+IG+V V + R ++
Sbjct: 437 VVRQC--ELDGLPFKNYRFADFSDVVASQLQSGLLVDIIGVVDEV-----VFRHISSRSK 489
Query: 368 RRILNLKDTSGRSVELTLWGDFC 390
R + L + S + + TLW D C
Sbjct: 490 RVVFKLMNLSNQLLSCTLWDDHC 512
>gi|448532896|ref|ZP_21621316.1| replication factor A [Halorubrum hochstenium ATCC 700873]
gi|445706130|gb|ELZ58015.1| replication factor A [Halorubrum hochstenium ATCC 700873]
Length = 497
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
G +RVT ++ D E E G V + G ++ + E+ + TV+
Sbjct: 210 GRVRVTLWDGKAD-LAEEFEAGEVVEVGDGYVRERDGDL-------ELHVGDRGTVERVD 261
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKD 375
E+ + +P+ ++I E + VD+ G VI +P R +G E Q R + +KD
Sbjct: 262 EDVEYVPE-------TTDIADLEIDQTVDIAGGVIETDPKRTFDRDDGSEGQVRNVRIKD 314
Query: 376 TSGRSVELTLWGDFCNKE 393
+G + + LWGD +++
Sbjct: 315 ETG-EIRVALWGDKADRD 331
>gi|312082357|ref|XP_003143411.1| hypothetical protein LOAG_07830 [Loa loa]
Length = 163
Score = 47.0 bits (110), Expect = 0.033, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 499 FITFIKSDSFCYTACPLMIGDRQCNKK--VTQSGNRWQCDRCNQEIDECDYRYLLQAQIQ 556
FI S + CP C KK V + + + C +C +E Y Y L ++
Sbjct: 3 FIEKYSSSYRTFQGCP------TCKKKLLVEKDNDLYICSKCGI-CNEYKYYYTLHMELF 55
Query: 557 DQTGLTWVTAFQESGEEILGCPAKELY-MLKYELQDDVRFGEIIRSRVFNQYLFRL 611
D TG VTAF + ++++G A E+ LK+ D R+ +S +F Y+FRL
Sbjct: 56 DFTGTVHVTAFDDCAQKLIGEQADEVAKFLKF---DSERYQSSFKSVLFKPYMFRL 108
>gi|326525481|dbj|BAJ88787.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 118
Score = 47.0 bits (110), Expect = 0.035, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 475 KTVSQIKNEGLGRSEKPD-WVTVRAFITFI-KSDSFCYTACPLMIGDRQCNKKVTQSGNR 532
K +++I E SEK + + T A I I SD + Y C R+CNKKV + GN
Sbjct: 27 KEITEITYE----SEKQEKFYTTEAMIKSIDTSDEWYYIGC------RKCNKKVQKQGNH 76
Query: 533 WQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEE 573
+ C +C +E + RY L+ +I D + T T F+ ++
Sbjct: 77 FYCPKCEKEPENTCPRYKLKLEICDLSATTTCTMFEAEAKK 117
>gi|348667623|gb|EGZ07448.1| hypothetical protein PHYSODRAFT_306620 [Phytophthora sojae]
Length = 356
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 52/183 (28%)
Query: 210 PIAALNPYQG-RWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
PI ++P G W + AR+ +R+++NA G G V + L+D++
Sbjct: 5 PIRDISPVLGVPWEVVARIAFLSPVRQWSNANGRGHVMNAKLVDAE-------------- 50
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
EI L S SL P E+DDSI ++F
Sbjct: 51 ---EI-------LASSASLTP-------------------------VEDDDSIEHVYYAF 75
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVPIL-RKNGMETQRRILNLKDTSGRSVELTLWG 387
I + A+ ++ D++ +++ V ++ RK+G++ +R L L D+S + TLW
Sbjct: 76 TTIRDFAHADVHAQADILPMIMDVGVLDSVVDRKDGVQVKRE-LKLTDSSNVEIVCTLWN 134
Query: 388 DFC 390
+F
Sbjct: 135 EFA 137
>gi|296089493|emb|CBI39312.3| unnamed protein product [Vitis vinifera]
Length = 156
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 311 VDLCTEEDDSIPKQQFSFRHISEIESAENN-SIVDVIGIVISVNPSVPILRKNGME-TQR 368
V+ + E+ IP+ +F F I E+ N +VDV G+V SV+P++ I RK+ E +
Sbjct: 71 VEEASNEETFIPEAKFKFVDIEELGPYVNGKELVDVSGVVQSVSPTMSIRRKSNNEIVPK 130
Query: 369 RILNLKDTSGRSVELTLWGDFCNKEG 394
R + + D + +SV ++LW D G
Sbjct: 131 RDITIADKTKKSVVVSLWNDHATNVG 156
>gi|413921626|gb|AFW61558.1| hypothetical protein ZEAMMB73_191775 [Zea mays]
Length = 277
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 13/180 (7%)
Query: 220 RWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVGR 278
+++I ARV K + R F L D +G +I +T V F ++
Sbjct: 37 KYSIVARVEVKFPIEPRFRERQ-----HFVLSDINGAKIEAITYMYETVKHFDNLLHEKH 91
Query: 279 VYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIES 336
VY + K +L P + NF HL E+ L+ + V+ T P + ++++I
Sbjct: 92 VYKMHNVKFNLHPGEFNFRHLNGPMELCLDQQAIVEPYTVPIQMAPFPKQILLNLADIAE 151
Query: 337 AENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQK 396
N ++VD++ +V+ ++ + + R+I+ + D G + +WGD NK +
Sbjct: 152 LPNRTLVDIMAVVVHLD----TIHRTMWGPFRKIV-IMDARGYLHIIKVWGDLLNKNALR 206
>gi|414872930|tpg|DAA51487.1| TPA: hypothetical protein ZEAMMB73_025868 [Zea mays]
Length = 301
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 70/153 (45%), Gaps = 8/153 (5%)
Query: 247 SFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVGRVYLIS--KGSLKPAQKNFNHLKNEWEI 303
F L D +G +I +T V F ++ VY + K +L P + NF HL E+
Sbjct: 83 HFVLSDINGAKIEAITYMYETVKHFDNLLHEKHVYKMHNVKFNLHPGEFNFRHLNGPMEL 142
Query: 304 FLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNG 363
L+ + V+ T P + ++++I N ++VD++ +V+ ++ +++
Sbjct: 143 CLDQQTIVEPYTVPIQMAPFPKQILLNLADIAELPNRTLVDIMAVVVHLD----TIQRTM 198
Query: 364 METQRRILNLKDTSGRSVELTLWGDFCNKEGQK 396
R+I+ + D G + +WGD NK +
Sbjct: 199 WGPFRKIV-IMDARGYLHIIKVWGDLLNKNALR 230
>gi|413932471|gb|AFW67022.1| hypothetical protein ZEAMMB73_171734 [Zea mays]
Length = 270
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 255 GGEIR-VTCFNAVVDRFYEIIEVGRVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTV 311
G +I +T V F ++ +VY + K SL P + NF+HL E+ L+ + V
Sbjct: 60 GAKIEAITYMYETVKHFDNLLHEKQVYEMHNVKFSLHPGEFNFHHLNGPMELCLDQQTIV 119
Query: 312 DLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRIL 371
+ T P + ++++I N ++VD++ IV+ ++ + M R +
Sbjct: 120 EPYTVPIQMAPFPKQILLNLADIAELPNRTLVDIMAIVVHLDTI-----HHTMWGPFRKI 174
Query: 372 NLKDTSGRSVELTLWGDFCNKEGQK 396
+ D G + +WGD NK +
Sbjct: 175 VIMDARGYLHIIKVWGDLLNKNALR 199
>gi|67482964|ref|XP_656777.1| replication factor A [Entamoeba histolytica HM-1:IMSS]
gi|56473998|gb|EAL51392.1| replication factor A, putative [Entamoeba histolytica HM-1:IMSS]
gi|449707205|gb|EMD46905.1| replication factor A, putative [Entamoeba histolytica KU27]
Length = 569
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 220 RWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRV 279
+ IK V K + + N +GK+FS L DS+G E +V+ FNA+VD+FY I +
Sbjct: 157 KCCIKGYVVHKSRINEFGNE--EGKIFSVILQDSEGSEFKVSFFNAMVDKFYSSIIEEQT 214
Query: 280 YLISKGSLKPAQKNFNHLKNEWEIFLEATST 310
+++K +K + +K LE T
Sbjct: 215 IVMNKIRIKKMNETSEKIKTRMMNNLEGIVT 245
>gi|448434386|ref|ZP_21586196.1| replication factor A [Halorubrum tebenquichense DSM 14210]
gi|445685302|gb|ELZ37657.1| replication factor A [Halorubrum tebenquichense DSM 14210]
Length = 493
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
G +RVT ++ D E E G V + G ++ + E+ + TV+
Sbjct: 210 GRVRVTLWDGKADLAAEF-EAGEVVEVGDGYVRERDGDL-------ELHVGDRGTVERVD 261
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKD 375
E+ + +P+ ++I E + VD+ G VI +P R +G E Q R + +KD
Sbjct: 262 EDVEYVPE-------TTDIADLEIDQTVDIAGGVIETDPKRTFDRDDGSEGQVRNVRIKD 314
Query: 376 TSGRSVELTLWGDFCNKE 393
+G + + LWGD +++
Sbjct: 315 ETG-EIRVALWGDKADRD 331
>gi|222445635|ref|ZP_03608150.1| hypothetical protein METSMIALI_01275 [Methanobrevibacter smithii
DSM 2375]
gi|222435200|gb|EEE42365.1| nucleic acid-binding domain protein [Methanobrevibacter smithii DSM
2375]
Length = 793
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 111/271 (40%), Gaps = 52/271 (19%)
Query: 320 SIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGR 379
+I +S + I+++E E++ + V G +I + R +G + + L + D SG
Sbjct: 521 TIETMLYSHKSIADVE--EDDEGIIVTGRIIESSDVREFDRTDGSKGYVKSLEIADNSG- 577
Query: 380 SVELTLWGDFCNKE-----GQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
S+ +TLW + KE K Q+ P +S ++ + I ST + +
Sbjct: 578 SINVTLWNENAKKEWNVGDAIKFQD-------PQISFRNDSL------EINVSRSTSI-L 623
Query: 435 NPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWV 494
PD +E +L + + SI + KT+ ++++ V
Sbjct: 624 EPDESEIDDLPTY------DELKESIY-----------VPKTIEALEDDDRN-------V 659
Query: 495 TVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQ 554
+ + + + T CP C V QS + + C C + IDE Y ++ A+
Sbjct: 660 RITGTLKEVFGNKILITKCP------SCGNTVDQSSDDFVCSFCGEPIDEPRYLLMVPAR 713
Query: 555 IQDQTGLTWVTAFQESGEEILGCPAKELYML 585
++D TG +T F EE+L +++ L
Sbjct: 714 LEDDTGEISITFFDNLAEELLDMKKEDIINL 744
>gi|413949080|gb|AFW81729.1| hypothetical protein ZEAMMB73_665548 [Zea mays]
Length = 259
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 15/181 (8%)
Query: 220 RWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVG 277
+++I ARV K + R+ + + F L D +G +I +T V F ++
Sbjct: 19 KYSIVARVEVKFPIEPRFRDRQ------HFILSDINGAKIEAITYMYETVKHFDNLLHEK 72
Query: 278 RVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
Y + K SL P + NF HL E+ L+ + V+ T P + ++++I
Sbjct: 73 HDYKMHNVKFSLHPGEFNFRHLNGPMELCLDQQTIVEPYTVPIQMAPFPKQILLNLADIA 132
Query: 336 SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQ 395
N ++VD++ IV+ ++ + + R+I+ + D G + +WGD NK
Sbjct: 133 ELPNRTLVDIMAIVVHLD----TIHRTMWGPFRKIV-IMDARGYLHIIKVWGDLLNKNAL 187
Query: 396 K 396
+
Sbjct: 188 R 188
>gi|413941935|gb|AFW74584.1| hypothetical protein ZEAMMB73_338699 [Zea mays]
Length = 537
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 218 QGRWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIE 275
Q +++I ARV K + RY + + + L D +G +I + +V F ++
Sbjct: 147 QRKYSIVARVEVKFPIEPRYRDRQ------HYILSDINGAKIEAIVTRYEIVKYFNSLLH 200
Query: 276 VGRVYLISK--GSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISE 333
VY + L P NF HL E++ + V+ T P + F ++ +
Sbjct: 201 EKHVYKMHNVWFGLNPGAFNFRHLNGTMELYFTQQTVVEPYTVPVQMPPFPKHIFLNLDD 260
Query: 334 IESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNK 392
I N ++VD++ IV+ ++ + + T R+I+ + D + +WGD NK
Sbjct: 261 IAELPNRTLVDIMAIVVHLD----TIHRTMWGTFRKIV-IMDARWSLHTIKVWGDLLNK 314
>gi|448466840|ref|ZP_21599262.1| replication factor A [Halorubrum kocurii JCM 14978]
gi|445813266|gb|EMA63246.1| replication factor A [Halorubrum kocurii JCM 14978]
Length = 495
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
G +RVT ++ D E E G V + G ++ + E+ + TV+
Sbjct: 210 GRVRVTLWDGKADLADEF-EAGEVVEVGDGYVRERDGDL-------ELHVGDRGTVERVD 261
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKD 375
E+ + +P+ ++++E E VD+ G VI +P R +G E Q R + +KD
Sbjct: 262 EDVEYVPETT----DVADLEIGET---VDIGGGVIETDPKRTFDRDDGSEGQVRNVRIKD 314
Query: 376 TSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDF 419
+G + + LWGD ++E E+ D F + ++ G +D
Sbjct: 315 DTG-EIRVALWGDKADRE----IELADRVVFTDVEIQDGWQDDL 353
>gi|77550798|gb|ABA93595.1| hypothetical protein LOC_Os11g28660 [Oryza sativa Japonica Group]
Length = 786
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 36/227 (15%)
Query: 343 VDVIGIVISVN-PSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD---------FCNK 392
VDV+G++ V P++ + ++ +R + + D S ++ +TLWGD N
Sbjct: 341 VDVMGVITEVGAPAIVRPKSRNTDSLKRTIQICDASNSTLPVTLWGDKAAIFDADTIYNA 400
Query: 393 EGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI---GTIPSTQLFINPDFAEAHELREWFD 449
+ Q +V VG V D+ G + G+ P Q ++N D E EL+E F
Sbjct: 401 GQTQPQVIVFVGML---------VKDYPGLGLIVTGSSPC-QWYLNLDIPEVLELKESFS 450
Query: 450 SGGKNAATVSISREIAAGGAKNEI--HKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDS 507
+ + A V + A G +I K + +I ++ ++ +S
Sbjct: 451 ANFRAIAWV----DNPATGYNQDIAEEKKILEILALNPHKNRSTRFIVTVTVKKICTENS 506
Query: 508 FCYTACPLMIGDRQCNKKVTQSGNRWQCDRC-NQEIDECDYRYLLQA 553
+ Y +C R C + G+ ++C C N I + Y+ +L A
Sbjct: 507 WWYNSC------RMCYRTSRPYGSTYKCSGCSNIGIPDPRYKVVLIA 547
>gi|413916849|gb|AFW56781.1| hypothetical protein ZEAMMB73_895477 [Zea mays]
Length = 259
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 15/181 (8%)
Query: 220 RWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVG 277
+++I ARV K + R+ + + F L D +G +I +T V F ++
Sbjct: 19 KYSIVARVEVKFPIEPRFRDRQ------HFILSDINGAKIEAITYMYETVKHFDNLLHEK 72
Query: 278 RVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
Y + K SL P + NF HL E+ L+ + V+ T P + ++++I
Sbjct: 73 HDYKMHNVKFSLHPGEFNFRHLNGPMELCLDQQTIVEPYTVPIQMAPFPKQILLNLADIA 132
Query: 336 SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQ 395
N ++VD++ IV+ ++ + + R+I+ + D G + +WGD NK
Sbjct: 133 ELPNRTLVDIMAIVVHLD----TIHRTMWGPFRKIV-IMDARGYLHIIKVWGDLLNKNAL 187
Query: 396 K 396
+
Sbjct: 188 R 188
>gi|413945118|gb|AFW77767.1| hypothetical protein ZEAMMB73_102861 [Zea mays]
Length = 249
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 247 SFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVGRVYLIS--KGSLKPAQKNFNHLKNEWEI 303
F D +G +I +T V F ++ VY + K SL P + NF HL E+
Sbjct: 47 HFIFYDINGAKIEAITYMYETVKHFDNLLHEKHVYKMHNVKFSLHPGEFNFRHLNGPMEL 106
Query: 304 FLEATSTVD--LCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK 361
L+ + V+ + + PKQ ++++I N ++VD++ IV+ ++ + +
Sbjct: 107 CLDQQTIVEPYIVPIQMAPFPKQ--ILLNLADIAELPNRTLVDIMAIVVHLD----TIHR 160
Query: 362 NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQK 396
R+I+ + D G + +WGD NK +
Sbjct: 161 TMWGPFRKIV-IMDARGYLHIIKVWGDLLNKNALR 194
>gi|448664770|ref|ZP_21684408.1| replication factor A [Haloarcula amylolytica JCM 13557]
gi|445774357|gb|EMA25378.1| replication factor A [Haloarcula amylolytica JCM 13557]
Length = 488
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 20/191 (10%)
Query: 205 PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARG-DGKVFSFDLLDSDGGEIRVTCF 263
P I AL Q ++ V +R ++ G +G+V + L D G IRVT +
Sbjct: 159 PGAGSSIDALTMGQSDVTLRGLVLDTDTIRTFDRDDGSEGRVSNLTLGDE-TGRIRVTLW 217
Query: 264 NAVVDRFYEIIEVGRVYLISKGSLKPAQKNFN-HLKNEWEIFLEATSTVDLCTEEDDSIP 322
+ DR E+ + G I G ++ + H+ ++ + D E D+ P
Sbjct: 218 DDRADRAEEL-DAGAAVEIIDGYVRERDGSLELHVGDQGAV----DEVEDDVAFEPDADP 272
Query: 323 KQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVE 382
I+E+E E VD+ G+V S +P R +G E Q R + ++D +G +
Sbjct: 273 --------IAEVELEET---VDIAGVVRSADPKRTFDRDDGSEGQVRNVRIQDATG-DIR 320
Query: 383 LTLWGDFCNKE 393
+ LWGD +K+
Sbjct: 321 VALWGDKADKD 331
>gi|413947628|gb|AFW80277.1| hypothetical protein ZEAMMB73_161157 [Zea mays]
Length = 286
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 247 SFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVGRVYLIS--KGSLKPAQKNFNHLKNEWEI 303
F L D +G +I +T V F ++ VY + K SL P + NF +L E+
Sbjct: 68 HFVLSDINGAKIEAITYMYETVKHFDNLLHEKHVYKMHNVKFSLHPGEFNFRYLNGPMEL 127
Query: 304 FLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNG 363
L+ + V+ T P + ++++I N ++VD++ IV+ ++ + +
Sbjct: 128 CLDQQTIVEPYTVPIQMAPFPKQILLNLADIAELPNRTLVDIMAIVVHLD----TIHRTM 183
Query: 364 METQRRILNLKDTSGRSVELTLWGDFCNKEGQK 396
R+I+ + D G + +WGD NK +
Sbjct: 184 WGPFRKIV-IMDARGYLHIIKVWGDLLNKNALR 215
>gi|218199233|gb|EEC81660.1| hypothetical protein OsI_25208 [Oryza sativa Indica Group]
Length = 376
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 9/172 (5%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
++ +N + W IK RV L + R D L++ +G I + +F
Sbjct: 6 LSQINSTRHNWRIKVRVARSWHLSGTSKGR-DFTALELILVNEEGVGITACVGENEIQKF 64
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVD-LCTEEDDSIPKQQFSFR 329
I G Y + + K N + + + IF + V+ + TE S+P F+F
Sbjct: 65 STSIVEGHAYFLRNFRVSRQTKKLNAVPSTYVIFFTPWTIVEEIPTEISGSLPLYIFNFV 124
Query: 330 HISEIE--SAENNSIVDVIGIVISVNPSVPILRKNGME--TQRRILNLKDTS 377
+++ + N +VDVIG + V+ P+++ NG+ + RR + L+D S
Sbjct: 125 DFEDLDERARHPNGLVDVIGQLTVVH---PLVQSNGLNGPSVRRNVELRDLS 173
>gi|448407833|ref|ZP_21574028.1| replication factor A [Halosimplex carlsbadense 2-9-1]
gi|445675083|gb|ELZ27618.1| replication factor A [Halosimplex carlsbadense 2-9-1]
Length = 493
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 20/185 (10%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARG-DGKVFSFDLLDSDGGEIRVTCFNAVVDR 269
+ AL Q ++ V +R ++ G +GKV + LL + G +RVT ++ DR
Sbjct: 165 VDALTMGQSDVNVRGIVLETDSIRTFDRDDGSEGKVSNL-LLGDETGRVRVTMWDDRADR 223
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFN-HLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
E+ + G I G ++ + + H+ + I E TV+ E D
Sbjct: 224 ATEL-DPGTAVEIVDGYVREREGDLELHVGDHGAID-EIDETVEFTPEAD---------- 271
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD 388
I + E + +VD+ G+V S +P R +G E Q R + ++D + + + LWG+
Sbjct: 272 ----AIGAVEMDQVVDLAGVVRSADPKRTFDRDDGSEGQVRNIRVQDDT-DDIRVALWGE 326
Query: 389 FCNKE 393
+KE
Sbjct: 327 KADKE 331
>gi|413948878|gb|AFW81527.1| hypothetical protein ZEAMMB73_249157 [Zea mays]
Length = 575
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 150/391 (38%), Gaps = 53/391 (13%)
Query: 214 LNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSD--GGEIRVTCFNAVVDRFY 271
L Y+ I+ V+ K ++ A +G + D++ SD G + + +
Sbjct: 15 LTTYKKHAIIQVHVSRKWS---FHGATENGPLQHIDMVLSDCKGNSMYAEIPANLAEEKG 71
Query: 272 EIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHI 331
+IE ++Y IS+ + A+ + + + I + + + + +
Sbjct: 72 ALIETNQIYDISRFRVTAAKTAYKPIDGDKMIQFTIYTIIKPASNPPPTFSLYIYQLTPF 131
Query: 332 SEIESA--ENNSIVDVIGIVISVNPSVPILRKNGMETQR-----RILNLKDTSGRSVELT 384
EIES +DV+G + V L+ +E Q R + ++D S +++++T
Sbjct: 132 DEIESQIQHKTKFLDVLGTITEVT----ALKTVHIEGQLSPTIIRDIMIEDLSRKTLKIT 187
Query: 385 LWGDFCNKEGQKLQEMVD-VGFFPVLSVKSGKVNDF-SGKSIGTIPSTQLFINPDFAEAH 442
LW +Q + D V P+L++ G + F G + + + NP EA
Sbjct: 188 LWAK--RATSFTIQNVYDPVSKKPILALFVGCLPKFYKGVYLSGGAACHWYFNPAIPEAE 245
Query: 443 ELRE------WFDSGGKNAATVSISREIAAGGAKNEI------HKTVSQIKNEGLGRSEK 490
+ + GG+ T+ + A HKT+ Q+ + +
Sbjct: 246 AYQNSITKYYAYKHGGE---TIQLHLPTQPEHALQTFQPPTIEHKTLEQLLT--MNPYDY 300
Query: 491 PDW-----VTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDEC 545
PD VTV T S+++ Y +C +C +K T + CD C + D
Sbjct: 301 PDTGYECTVTVTEIDT---SNTWWYPSC------TKCGRKTTPHNTTYYCDLC--KWDGY 349
Query: 546 DYRYLLQAQIQDQTGLTWVTAFQESGEEILG 576
++Y L+ + D T + + F I+G
Sbjct: 350 KFKYKLKFRASDATAIAQMFCFDNIARYIVG 380
>gi|77556294|gb|ABA99090.1| hypothetical protein LOC_Os12g32690 [Oryza sativa Japonica Group]
Length = 1312
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 192 NFRNHGPILKNEAPARIIP-------IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGK 244
NF +H +LK + I+ IA+L G ++ R++ + N+
Sbjct: 589 NFPSHKLVLKKDCQDGIVKAKMGELQIASLELSDGNPTLRIRISRLWEYHDQNDETNLHH 648
Query: 245 VFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIF 304
+ L+D G I + +F +I G+VYL++ +KP K++ + N+ I
Sbjct: 649 I-GLVLVDQKGSSIAAMIYPPCDKKFKPLITEGKVYLLTYYRVKPCTKHYWPVDNKLAIT 707
Query: 305 LEATSTVDLCTEEDDSIPKQQFSFRHISEIES 336
STV+ C + D+ + +S +E+ S
Sbjct: 708 FTWWSTVEECVDVPDNFAQYAYSLTPFNELRS 739
>gi|224108251|ref|XP_002333414.1| predicted protein [Populus trichocarpa]
gi|222836505|gb|EEE74912.1| predicted protein [Populus trichocarpa]
Length = 756
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 56/306 (18%), Positives = 120/306 (39%), Gaps = 30/306 (9%)
Query: 321 IPKQQFSFRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSG 378
+P+ F+F + I + S + DV+G + ++ P ++ +R L++ G
Sbjct: 336 VPRYYFNFIDYAHILTKSKGSRILTDVLGRLKALQPLEQVMVCGQTLENKREFMLENIRG 395
Query: 379 RSVELTLWGDFCNKEGQKLQEMVDVGF-FPVLSVKSG-KVNDFSGK-SIGTIPSTQLFIN 435
+ +TLWGD + E+ PV+ +G +V +F GK ++ + ++ + N
Sbjct: 396 EELHITLWGD----SARDFDELALHNLPSPVIIAFAGFRVTEFKGKPNLNSTTTSLWYFN 451
Query: 436 PDFAEAHELREWFDS--------GGKNAATVSISREIAAGGAKNEIHKTVSQIKNEGLGR 487
PD E + +F + +SI +I E +T+ +I
Sbjct: 452 PDIPECLAYKHFFAQLPVEIQQLPSSSNVVLSIEEQI------KENRRTIHEILCMNPYE 505
Query: 488 SEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDY 547
+ + + + F + + Y +CP +CNKK++ + C +
Sbjct: 506 HKHLRFTYQASIVDFDFPNGWWYPSCP------KCNKKLSGGEKNYTCMDHDAITSLPVP 559
Query: 548 RYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRVFNQY 607
+ L+ + D +T F ++ E G A Y+ + D + +++
Sbjct: 560 WFRLECIVTDGEDVTNFFLFGKTAENFFGSSAHH-YVYDKKFIDPSVLPPAMAAKLNKSM 618
Query: 608 LFRLKI 613
+F+L+
Sbjct: 619 IFQLRF 624
>gi|448444635|ref|ZP_21589925.1| replication factor A [Halorubrum saccharovorum DSM 1137]
gi|445686048|gb|ELZ38389.1| replication factor A [Halorubrum saccharovorum DSM 1137]
Length = 496
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 26/143 (18%)
Query: 256 GEIRVTCFN---AVVDRFY--EIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATST 310
G +RVT ++ + D F E++EVG Y+ + + E+ + T
Sbjct: 210 GRVRVTLWDDKAGLADEFGPGEVVEVGDGYVRER-------------DGDLELHVGDRGT 256
Query: 311 VDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRI 370
V+ E+ + +P+ +++ E +VD+ G VI +P R +G E Q R
Sbjct: 257 VERVDEDVEYVPE-------TTDVADVEIGEVVDIGGGVIETDPKRTFDRDDGSEGQVRN 309
Query: 371 LNLKDTSGRSVELTLWGDFCNKE 393
+ +KD +G + + LWGD ++E
Sbjct: 310 VRIKDDTG-EIRVALWGDKADRE 331
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLR---RYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
IA + P +VT+ GD+R R ++ +G+V + D+ D+ G +RV ++ +
Sbjct: 56 IADIEPGMNDVKFLGKVTSIGDVRTFERDDDEAEEGRVCNVDVADA-SGSVRVALWDEMA 114
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
E +EVG+V + + ++ ++ L+ S + +ED + Q
Sbjct: 115 AAAEEQLEVGQVLRV----MGRPKEGYSGLE---------VSADKVEPDEDAEVDVQVLD 161
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
++++ ++ VD++G V+ + R +G E + L + D +GR V +TLW
Sbjct: 162 TYQVADLSLGASD--VDLVGQVLDTDSVRTFDRDDGSEGRVANLTVGDETGR-VRVTLWD 218
Query: 388 D 388
D
Sbjct: 219 D 219
>gi|414888156|tpg|DAA64170.1| TPA: hypothetical protein ZEAMMB73_601434 [Zea mays]
Length = 265
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 8/137 (5%)
Query: 220 RWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVGR 278
+++I ARV K + + R F L D +G +I +T + V F ++
Sbjct: 73 KYSIVARVEVKFPIEPHYRDRQH-----FILSDINGAKIEAITYVSVTVKHFNNLLHEKH 127
Query: 279 VYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIES 336
VY + K L P + NF HL E++ + V+ T P + F ++ +I
Sbjct: 128 VYNMHNVKFGLHPGEFNFRHLNGPMELYFNQQTIVEPYTVPIQMPPFPKHIFFNLDDIAE 187
Query: 337 AENNSIVDVIGIVISVN 353
N ++VD++ IV+ ++
Sbjct: 188 LPNRTLVDIMAIVVHMD 204
>gi|296089491|emb|CBI39310.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 317 EDDSIPKQQFSFRHISEIESAENN-SIVDVIGIVISVNPSVPILRKNGME-TQRRILNLK 374
E+ IP+ +F F I E+ N +VDV G+V SV+P++ I RK+ E +R + +
Sbjct: 153 EETFIPEAKFKFVDIEELGPYVNGKELVDVSGVVQSVSPTMSIRRKSNNEIVPKRDITIA 212
Query: 375 DTSGRSVELTLWGDFCNKEG 394
D + +SV ++LW D G
Sbjct: 213 DKTKKSVVVSLWNDHATNVG 232
>gi|448730441|ref|ZP_21712749.1| replication factor A [Halococcus saccharolyticus DSM 5350]
gi|445793609|gb|EMA44181.1| replication factor A [Halococcus saccharolyticus DSM 5350]
Length = 493
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 20/191 (10%)
Query: 204 APARIIPIAALNPYQGRWAIKARVTAKGDLRRY--NNARGDGKVFSFDLLDSDGGEIRVT 261
A + +A + P A+VT+ G+LR + + DG+V + ++ D + G+IRV
Sbjct: 49 ADGEVEGVADVEPGMEEAKFVAKVTSVGELRTFERDGEDEDGQVINVEVAD-ETGQIRVA 107
Query: 262 CFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSI 321
++ + E +E G V I+ +P ++ +N ++ + A VD+ + D+I
Sbjct: 108 FWDERAESAAEELETGSVLKIAG---RP-REGYNGIEISADRVEPADVEVDVDLDAADTI 163
Query: 322 PKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSV 381
S VD++G+V+ + R +G E + L L D +GR+
Sbjct: 164 AGLSL------------GQSDVDLVGLVLDTDTVRTFDRDDGSEGRVANLTLGDETGRT- 210
Query: 382 ELTLWGDFCNK 392
+TLW D +
Sbjct: 211 RVTLWDDQAGR 221
>gi|308080968|ref|NP_001183010.1| uncharacterized protein LOC100501330 [Zea mays]
gi|238008768|gb|ACR35419.1| unknown [Zea mays]
Length = 439
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 116/284 (40%), Gaps = 29/284 (10%)
Query: 313 LCTEEDDSI---PKQQFSFRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQ 367
+ E+ D I PK FS + +++ +N + +DVI + V+ + +G +
Sbjct: 9 IVLEDKDQIQGFPKYTFSLTPLDKLDQYKNKTDRFIDVIAKISGVSNVAKVPTTSGDQQM 68
Query: 368 RRILNLKDTSGRSVELTLWG--------DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDF 419
RR++ L+D G +EL+L G D GQ+ ++ + ++ + G+
Sbjct: 69 RRVVLLEDLKGNMIELSLSGKRALEFDGDQVLDVGQQ-HHVIAIFVGTLVKLYKGEYTFL 127
Query: 420 SGKSIGTIPSTQLFINP-DFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIHKTVS 478
SG S + + +IN D AE ++ S + + A + K++
Sbjct: 128 SGTS-----ACRWYINENDIAEIKAFQKSLPSEPVPIKKTYLQNDDATHKFE---EKSLE 179
Query: 479 QIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRC 538
Q+K+ + I ++ ++CY AC + CN + Q N ++C +
Sbjct: 180 QLKHVDPFLDMGQRYQCTATIIGITENQTWCYKACKI------CNSAIIQKENGYKCTKE 233
Query: 539 NQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL 582
+ +++Y + D T F++ G E++G A L
Sbjct: 234 GCPSTQFEWKYKIPFIASDHTYNLEFMFFEKKGMELIGKSASTL 277
>gi|397645104|gb|EJK76691.1| hypothetical protein THAOC_01533, partial [Thalassiosira oceanica]
Length = 169
Score = 45.4 bits (106), Expect = 0.095, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 3 VNLTPNSISLING-----GDVNSKPLVQVMDIKLI----GSTQERYRFLISDSVSTQHAM 53
++LT +SI I G D + P VQ++ K I G ERY+ ++SD M
Sbjct: 42 MSLTHSSIQRIYGMSGSSDDQSFVPTVQLLSCKRIANKSGGGDERYKVILSDGTHFCSGM 101
Query: 54 LATQLNDRVKTGQVKKGSVVQLIDYICSTV-QNRKIIVVLNMET 96
ATQLN V G + + +V+++ ++I + + ++I +VL E+
Sbjct: 102 CATQLNHLVHAGVLAQDAVIRVTEFIVNVMGSGQRICIVLGAES 145
>gi|413956551|gb|AFW89200.1| hypothetical protein ZEAMMB73_192507 [Zea mays]
Length = 96
Score = 45.4 bits (106), Expect = 0.096, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 4 NLTPNSISLI-----NGGD-VNSKPLVQVMDIKLIGSTQERYRFLISDSVSTQHAMLATQ 57
++TP ++S I G D S +VQV+D+K IG R+ F +D AML T
Sbjct: 6 SVTPGAVSYILAHPSTGSDGAVSDLVVQVLDLKSIG-MGSRFSFTATDGNDKIKAMLPTY 64
Query: 58 LNDRVKTGQVKKGSVVQLIDYICSTVQ 84
V +G +K +++++DY C++V+
Sbjct: 65 FASEVHSGNLKNFGLIRILDYTCNSVK 91
>gi|242047974|ref|XP_002461733.1| hypothetical protein SORBIDRAFT_02g007190 [Sorghum bicolor]
gi|241925110|gb|EER98254.1| hypothetical protein SORBIDRAFT_02g007190 [Sorghum bicolor]
Length = 735
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 72/385 (18%), Positives = 151/385 (39%), Gaps = 45/385 (11%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVV 267
P++ L P + I RV+ + Y + FD+ +D G + V+
Sbjct: 240 PLSELRPMNTMYNIHVRVSRTWE---YRGKSEKNPLIHFDMVVIDQKGYAMYCEVSPEVL 296
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
+ +E G+V I K ++ A+ + + + + L + + D S PK
Sbjct: 297 PHMKQYLEEGKVLYIWKACVERAKPGYRVVDAPYMLKLIMRTEIFEGNSNDTSFPKYH-- 354
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
+++S N VDVIG + +++ + +G RR++ L+D G +++L+L
Sbjct: 355 -----DLQSFLN---VDVIGKITAISNAAVARNTSGDLMMRRLITLQDHKGNTIDLSL-- 404
Query: 388 DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI-NPDFAEAHELRE 446
GQ+ E F + G+ + +GT+ +++ + F
Sbjct: 405 -----SGQRALEFDAEAVFDI-----GQNHHVIAIFVGTL--MKIYREDYKFLSGTSACR 452
Query: 447 WFDSGGKNAATVSISREIAAGGAKNEIHKTVSQ------IKNEGLGRSEKPDWVTVRAFI 500
W+ + A + R + + + S+ ++ + L + D +T + +
Sbjct: 453 WYINENDIPAMRTFQRGLPYQVTPIQKLQLQSEDYMEQGVEEKTLFDLKHIDPLTDKCTV 512
Query: 501 TFI---KSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQD 557
T I + + +CY AC + CN + + + C + + D++Y + D
Sbjct: 513 TLISLAEKEQWCYRACKV------CNSTLILGNDGYDCTKDGCSCKQYDWKYKVCFIAAD 566
Query: 558 QTGLTWVTAFQESGEEILGCPAKEL 582
T F++ G E++G A+ L
Sbjct: 567 DTYSLQFMFFEKKGVELIGKSAETL 591
>gi|448457207|ref|ZP_21595702.1| replication factor A [Halorubrum lipolyticum DSM 21995]
gi|445810788|gb|EMA60803.1| replication factor A [Halorubrum lipolyticum DSM 21995]
Length = 502
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 30/173 (17%)
Query: 256 GEIRVTCFNA---VVDRF--YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATST 310
G +RVT ++ + D F E++EVG Y+ + + E+ + T
Sbjct: 210 GRVRVTLWDDKADLADEFEPAEVVEVGDGYVRER-------------DGDLELHVGDRGT 256
Query: 311 VDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRI 370
V+ E+ + +P+ I+E+E E VD+ G VI +P R +G E Q R
Sbjct: 257 VERVEEDVEYVPETT----DIAELEIGET---VDIGGGVIETDPVRTFDRDDGSEGQVRN 309
Query: 371 LNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS 423
+ +KD +G + + LWGD ++E E+ D F + ++ G +D +
Sbjct: 310 VRVKDDTG-EIRVALWGDKADRE----IELADRVVFTDVEIQDGWQDDLEASA 357
>gi|390604500|gb|EIN13891.1| hypothetical protein PUNSTDRAFT_140327 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1276
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 20 SKPLVQVMDIKLIGST------QERYRFLISDSVSTQHAMLATQLNDRVKTGQVKKGSVV 73
S P VQV+ ++ + T ERYR +SD A+LA + N V + V+K +V+
Sbjct: 917 SIPKVQVLTVRKVTPTVSYAKETERYRLTVSDGAHFIPALLAPESNHLVTSNAVQKNTVI 976
Query: 74 QLIDYICSTVQNRKIIVVLNMETIILDCEPIGNPKI 109
L ++ + V + + + M + E IG+P I
Sbjct: 977 TLDNFATNVVNGKIALEIFAMTVVAQPNEKIGSPMI 1012
>gi|413950138|gb|AFW82787.1| hypothetical protein ZEAMMB73_165169 [Zea mays]
Length = 229
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 8/147 (5%)
Query: 253 SDGGEIR-VTCFNAVVDRFYEIIEVGRVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATS 309
+ G +I +T V F ++ VY + K SL P + NF+HL E+ L+ +
Sbjct: 30 ARGAKIEAITYMYETVKHFDNLLHEKHVYKMHNVKFSLHPGEFNFHHLNGPMELCLDQQT 89
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRR 369
V+ T P + ++++I N ++VD++ IV+ ++ + + R+
Sbjct: 90 IVEPYTVPIQMAPFPKQILLNLADIAELPNRTLVDIMAIVVHLD----TIHRTMWGPFRK 145
Query: 370 ILNLKDTSGRSVELTLWGDFCNKEGQK 396
I+ + D G + +WGD NK +
Sbjct: 146 IV-IMDARGYLHIIKVWGDLQNKNALR 171
>gi|413944680|gb|AFW77329.1| hypothetical protein ZEAMMB73_618034 [Zea mays]
Length = 335
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 247 SFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVGRVYLIS--KGSLKPAQKNFNHLKNEWEI 303
F L D +G +I +T V F ++ VY + K +L P + NF HL E+
Sbjct: 117 HFVLSDINGAKIEAITYMYETVKHFDNLLHEKHVYKMHNVKFNLHPGEFNFRHLNGPMEL 176
Query: 304 FLEATSTVD--LCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRK 361
L+ + V+ + + PKQ ++++I N ++VD++ +V+ ++ + +
Sbjct: 177 CLDQQAIVEPYIVPIQMAPFPKQ--ILLNLADIAELPNRTLVDIMAVVVHLD----TIHR 230
Query: 362 NGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQK 396
R+I+ + D G + +WGD NK +
Sbjct: 231 TMWGPFRKIV-IMDARGHLHIIKVWGDLLNKNALR 264
>gi|390341544|ref|XP_003725476.1| PREDICTED: uncharacterized protein C16orf73 homolog
[Strongylocentrotus purpuratus]
Length = 834
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 112/262 (42%), Gaps = 22/262 (8%)
Query: 343 VDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVD 402
++++ +V V I+ K G ET+R ++ D + S + +W + Q+ Q
Sbjct: 534 INLLTLVKKVGTPKDIVTKGGRETKRCEVSFFDETCSSFSMVIWDEEVIDLVQQWQAKET 593
Query: 403 VGFFPVLSVKSGKVNDFSGKSIGTIPSTQLF-INPDFAEAHELREWFDSGGKNAATVSIS 461
V F V V K +DF + ++ S +F INPD EAH L ++ S + + +
Sbjct: 594 V-IFAVDVV--AKYDDFRNTMVASVDSKSIFIINPDTREAHSLYKFGQSSTADEESAEET 650
Query: 462 REIAAGGAKNEIHKTVSQIKNEGLGRSE---KPDWVTVRAFITFIKSDSFCYTACPLMIG 518
++ A ++++ V ++K + + + D+ V AF++ D T+ L +
Sbjct: 651 KDSVDLQAIHDVY-MVDELKAKMCDKQSMMMQSDYGIVYAFLSAYDLDG--PTSAVLSMR 707
Query: 519 DRQCNKKVTQSGNRWQCDRCNQEI---DECDYRYLLQAQIQDQTGL---TWVTAF----- 567
C+K+V + C+ I + Y L+ + D +G +V +
Sbjct: 708 CTSCHKRVDKETGTCLNSNCSAAITDQSQAILNYDLRVNLSDLSGTINGVYVGGYVAEQI 767
Query: 568 -QESGEEILGCPAKELYMLKYE 588
+S EE C EL +K++
Sbjct: 768 IGKSAEEFSKCSEDELTGMKWQ 789
>gi|357440733|ref|XP_003590644.1| hypothetical protein MTR_1g072220 [Medicago truncatula]
gi|355479692|gb|AES60895.1| hypothetical protein MTR_1g072220 [Medicago truncatula]
Length = 231
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 34/201 (16%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
L+D G I V+ ++ +F E ++ G V+ IS + + +NE+++ +
Sbjct: 5 LMDRKGDRIGVSIRRTLIYKFKEQLQEGMVFTISSSDVASNSDLYRPSRNEYKLNFTINT 64
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEI--ESAENNSIVDVIGIVISVNPSVPILRKNGMETQ 367
V L + +P +SF +I ES +NN +VDVIG++I V G+E +
Sbjct: 65 KVKLS--KTVLVPTNVYSFTPAPDIFNESYDNNYLVDVIGVMIGV----------GVERE 112
Query: 368 RRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI--G 425
+ G EL + + E Q V+ + KV F GK
Sbjct: 113 Y------ERDGYVEELHSF--LSSGESQN----------AVVVIMLAKVKLFQGKPALQN 154
Query: 426 TIPSTQLFINPDFAEAHELRE 446
ST++ NP E ELR+
Sbjct: 155 AFSSTRITFNPKIGETKELRK 175
>gi|407039454|gb|EKE39659.1| replication factor A, putative [Entamoeba nuttalli P19]
Length = 569
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 220 RWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRV 279
+ IK V K + + N +GK+FS L D++G E +V+ FNA+VD+FY I +
Sbjct: 157 KCCIKGYVVHKSRINEFGNE--EGKIFSVILQDNEGSEFKVSFFNAMVDKFYSSIIEEQT 214
Query: 280 YLISKGSLKPAQKNFNHLKNEWEIFLEATST 310
+++K +K + +K LE T
Sbjct: 215 IVMNKIRIKKMNETSEKIKTRMMNNLEGIVT 245
>gi|344213005|ref|YP_004797325.1| replication factor A [Haloarcula hispanica ATCC 33960]
gi|343784360|gb|AEM58337.1| replication factor A [Haloarcula hispanica ATCC 33960]
Length = 488
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 18/190 (9%)
Query: 205 PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARG-DGKVFSFDLLDSDGGEIRVTCF 263
P I AL Q ++ V +R ++ G +G+V + L D G IRVT +
Sbjct: 159 PGAGSSIDALTMGQSDVTLRGLVLDTDTIRTFDRDDGSEGRVSNLTLGDE-TGRIRVTLW 217
Query: 264 NAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPK 323
+ DR E ++ G I G ++ + E+ + VD E DD +
Sbjct: 218 DDRADRAEE-LDAGAAVEIIDGYVRERDGSL-------ELHVGDQGAVD---EVDDDVAF 266
Query: 324 QQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVEL 383
+ + I+E+E E D+ G+V S +P R +G E Q R + ++D +G + +
Sbjct: 267 EPDA-DPIAEVELEET---ADIAGVVRSADPKRTFDRDDGSEGQVRNVRIQDATG-DIRV 321
Query: 384 TLWGDFCNKE 393
LWGD +K+
Sbjct: 322 ALWGDKADKD 331
>gi|296083354|emb|CBI22990.3| unnamed protein product [Vitis vinifera]
Length = 69
Score = 45.1 bits (105), Expect = 0.13, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 379 RSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPD 437
++V ++LW D GQ+L + D FP++++KS KV DF S+ T+ + + +NPD
Sbjct: 10 KTVVVSLWNDHATNVGQELLDNADK--FPIVAIKSLKVGDFQVVSLSTLSESIVLVNPD 66
>gi|414868216|tpg|DAA46773.1| TPA: hypothetical protein ZEAMMB73_923308 [Zea mays]
Length = 469
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 548 RYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQD 591
+Y++ ++ D TG WV+ F E E+I+GC A EL ++ E+ D
Sbjct: 222 KYIMVIKVSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEVHD 265
>gi|328716198|ref|XP_003245862.1| PREDICTED: hypothetical protein LOC100570100 [Acyrthosiphon pisum]
Length = 342
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 72/130 (55%), Gaps = 17/130 (13%)
Query: 22 PLVQVMDIKLI---GSTQERYRFLISDSVSTQH----AMLATQLNDRVKTGQVKKGSVVQ 74
P++QV++I+ + S +YR +ISD QH MLAT+LN+ + G + K S++
Sbjct: 195 PVMQVINIRQLIDTASGLNKYRLMISDG---QHFSTFVMLATRLNNMITNGYLTKFSIIY 251
Query: 75 LIDYICSTV-QNRKIIVVLNMETIILDCEP---IGNPKIFSE-SELTAQKTIPSNNLPQP 129
+ Y+ + Q+ K +++L + + L P IG+PK E S + +IP+ ++P+P
Sbjct: 252 IRSYVVGLLGQSIKKVIILT-DLVCLVTRPGAMIGDPKPVREISGQVIENSIPA-SIPEP 309
Query: 130 VRVNNYSAPN 139
+ + AP+
Sbjct: 310 IVEMDTLAPS 319
>gi|356927738|gb|AET42528.1| hypothetical protein EXVG_00343 [Emiliania huxleyi virus 202]
Length = 201
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 8/117 (6%)
Query: 197 GPILKNEAPARII-PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDG 255
G ILK ++ PI+ + G I+ VT K + R Y N G + F + D +
Sbjct: 92 GGILKKRTNQSLVTPISEIGTTPGNVKIQGVVTFK-NCRPYKN----GFMCKFRIQD-ES 145
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVD 312
G I +T +N D+F ++IE + Y+IS ++K A + ++ EI L++TSTV+
Sbjct: 146 GNIGMTAWNDTYDKFDQLIEQNKTYVISGMTVKKANPAY-ETQHTHEITLKSTSTVE 201
>gi|328725637|ref|XP_003248557.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Acyrthosiphon pisum]
Length = 248
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 35/182 (19%)
Query: 279 VYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAE 338
VY I G +K A K +N KN +EIF +T+ + D IP Q + I + S +
Sbjct: 8 VYNIKNGEVKEADKAYNKSKNNYEIFFNGLTTI-IERSGDTDIPNHQ-QLKTIDNLFSMD 65
Query: 339 NNSIVDVIGIVISVNPSVPILRKNGMETQRRI-------LNLKDTSGRSVELTLWG---- 387
N++ + + IL + + +RI +K V +TLW
Sbjct: 66 QNTL---------IGNNSDILLSSLIYNYKRIYLSYKIHYYIKIAFFLKVTVTLWDTEAT 116
Query: 388 DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG-KSIGTIPSTQLFINPDFAEAHELRE 446
+F EG ++S+ GK+ D+ K I S+++ INP++ E +L+
Sbjct: 117 NFNANEG------------DIMSIMEGKIIDYKNVKKISMTGSSKIEINPNWNETLDLQN 164
Query: 447 WF 448
W+
Sbjct: 165 WY 166
>gi|297840899|ref|XP_002888331.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334172|gb|EFH64590.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 331
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 534 QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL 582
+C++CN E+ + RY L + D TG T + F E+I+G PA EL
Sbjct: 157 RCEKCNAEVSAVEARYWLHLDVMDNTGETKLMLFDSFVEKIIGTPAYEL 205
>gi|297829130|ref|XP_002882447.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328287|gb|EFH58706.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 331
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 534 QCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL 582
+C++CN E+ + RY L + D TG T + F E+I+G PA EL
Sbjct: 157 RCEKCNAEVSAVEARYWLHLDVMDNTGETKLMLFDSFVEKIIGTPAYEL 205
>gi|302789145|ref|XP_002976341.1| hypothetical protein SELMODRAFT_416482 [Selaginella moellendorffii]
gi|300155971|gb|EFJ22601.1| hypothetical protein SELMODRAFT_416482 [Selaginella moellendorffii]
Length = 266
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 546 DYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKELYMLKYELQDDVRFG-EIIRSRVF 604
+++Y L+ I+D W FQE+ EI+G PAKEL ++ E + I S+++
Sbjct: 169 EFKYALKMCIKDSGSRVWAIVFQEAALEIVGMPAKELATIQDETYPAFSLHIDGIHSKIY 228
Query: 605 NQYLFRLKIKEELYGDEQRV 624
N F+++ K E Y D +++
Sbjct: 229 N---FKIRSKLEKYQDMEKL 245
>gi|15789450|ref|NP_279274.1| replication factor A [Halobacterium sp. NRC-1]
gi|169235165|ref|YP_001688365.1| replication factor A [Halobacterium salinarum R1]
gi|10579780|gb|AAG18754.1| replication A related protein [Halobacterium sp. NRC-1]
gi|167726231|emb|CAP13011.1| replication protein A [Halobacterium salinarum R1]
Length = 474
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
G +RVT ++ D ++ + G V I G ++ + + E+ + T V
Sbjct: 214 GRVRVTLWDDQADTATDL-DAGAVVEIVDGYVREREGSL-------ELHVGDTGAVT--- 262
Query: 316 EEDDSIPKQQFSFR-HISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLK 374
+P SF + I+S E + D+ G+V SV+P+ R +G E Q R + L+
Sbjct: 263 ----PVPDADVSFVPDTTSIDSLEQDDTADIAGVVRSVDPTRTFDRDDGSEGQVRNVRLQ 318
Query: 375 DTSGRSVELTLWGDFCN 391
D +G + + LWG+ +
Sbjct: 319 DDTG-DIRVALWGEKAD 334
>gi|414865329|tpg|DAA43886.1| TPA: hypothetical protein ZEAMMB73_055176 [Zea mays]
Length = 566
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 218 QGRWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIE 275
Q +++I ARV K + RY + + + L D +G +I + +V F ++
Sbjct: 38 QRKYSIVARVEVKFPIEPRYRDRQ------HYILSDINGAKIEAIATRYEIVKNFNSLLH 91
Query: 276 VGRVYLISK--GSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISE 333
VY + L P NF HL E++ + V+ T P + F ++ +
Sbjct: 92 EKHVYKMHNVWFGLNPGAFNFRHLNGTMELYFTHQTVVEPYTVPVQMPPFPKHIFLNLDD 151
Query: 334 IESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNK 392
I N ++VD++ IV+ ++ + + T R+I+ + D + +WGD NK
Sbjct: 152 IAELPNRTLVDIMAIVVHLD----TIHRTMWGTFRKIV-IMDARWSLHTIKVWGDLLNK 205
>gi|433639732|ref|YP_007285492.1| single-stranded DNA-binding protein [Halovivax ruber XH-70]
gi|433291536|gb|AGB17359.1| single-stranded DNA-binding protein [Halovivax ruber XH-70]
Length = 486
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 20/169 (11%)
Query: 225 ARVTAKGDLRRYNNARG-DGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLIS 283
V G +R ++ G +GKV + L D + G +RVT ++ D EI + V +
Sbjct: 188 GEVLETGSIRTFDRDDGSEGKVSNLTLGD-ETGRVRVTLWDEQADLATEIDD-SEVVEVV 245
Query: 284 KGSLKPAQKNFN-HLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSI 342
G +K N H+ N+ TV++ E+ +P + IE E +
Sbjct: 246 DGYVKERDGNLELHVGNQ--------GTVEVVDEDVQYVPDS-------TPIEDVEIDQT 290
Query: 343 VDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCN 391
VD+ G+V S +P R +G E Q R + ++D +G + + LWG+ +
Sbjct: 291 VDLKGVVRSADPVRTFDRDDGSEGQVRNIRVQDATG-DLRVALWGEKAD 338
>gi|448637993|ref|ZP_21676044.1| replication factor A [Haloarcula sinaiiensis ATCC 33800]
gi|448655003|ref|ZP_21681855.1| replication factor A [Haloarcula californiae ATCC 33799]
gi|445763879|gb|EMA15053.1| replication factor A [Haloarcula sinaiiensis ATCC 33800]
gi|445765452|gb|EMA16590.1| replication factor A [Haloarcula californiae ATCC 33799]
Length = 488
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 20/191 (10%)
Query: 205 PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARG-DGKVFSFDLLDSDGGEIRVTCF 263
P I AL Q ++ V +R ++ G +G+V + L D G IRVT +
Sbjct: 159 PGAGSSIDALTMGQSDVTLRGLVLDTDSIRTFDRDDGSEGRVSNLTLGDE-TGRIRVTLW 217
Query: 264 NAVVDRFYEIIEVGRVYLISKGSLKPAQKNFN-HLKNEWEIFLEATSTVDLCTEEDDSIP 322
+ DR E ++ G I G ++ + H+ ++ + D E D+ P
Sbjct: 218 DDRADRADE-LDAGAAVEIIDGYVRERDGSLELHVGDQGAV----DEVEDDVAFEPDADP 272
Query: 323 KQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVE 382
I+E+E E D+ G+V S +P R +G E Q R + ++D +G +
Sbjct: 273 --------IAEVELEET---ADIAGVVRSADPKRTFDRDDGSEGQVRNVRIQDATG-DIR 320
Query: 383 LTLWGDFCNKE 393
+ LWGD +K+
Sbjct: 321 VALWGDKADKD 331
>gi|402223355|gb|EJU03420.1| hypothetical protein DACRYDRAFT_106580, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 344
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 35/160 (21%)
Query: 325 QFSFRH--ISEIESAENNSIVDVIGIVISVNPSV--PILRKNG------------METQR 368
QF H +S + + E+ S V+++G+++ V V PI ++ + +
Sbjct: 155 QFLTDHPSLSFLAALEDKSKVNILGVILQVGKLVTKPIAMRSASVALDGSTQQASTKQKS 214
Query: 369 RIL---NLKDTSGRSVELTLWGD----FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSG 421
R+L + D G V +T+W F K GQ VL V + V G
Sbjct: 215 RMLCEVQVVDKEGHVVRVTMWNSRAKIFSGKHGQ------------VLHVMNSVVEHRGG 262
Query: 422 KSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSIS 461
++ + T+ +NP EA EL++WF G AA IS
Sbjct: 263 VTLNSSEKTEFPLNPKIEEADELKQWFTDGFDEAALKHIS 302
>gi|55378982|ref|YP_136832.1| replication factor A [Haloarcula marismortui ATCC 43049]
gi|55231707|gb|AAV47126.1| replication A related protein [Haloarcula marismortui ATCC 43049]
Length = 488
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 20/191 (10%)
Query: 205 PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARG-DGKVFSFDLLDSDGGEIRVTCF 263
P I AL Q ++ V +R ++ G +G+V + L D G IRVT +
Sbjct: 159 PGAGSSIDALTMGQSDVTLRGLVLDTDSIRTFDRDDGSEGRVSNLTLGDE-TGRIRVTLW 217
Query: 264 NAVVDRFYEIIEVGRVYLISKGSLKPAQKNFN-HLKNEWEIFLEATSTVDLCTEEDDSIP 322
+ DR E ++ G I G ++ + H+ ++ + D E D+ P
Sbjct: 218 DDRADRADE-LDAGAAVEIIDGYVRERDGSLELHVGDQGAV----DEVEDDVAFEPDADP 272
Query: 323 KQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVE 382
I+E+E E D+ G+V S +P R +G E Q R + ++D +G +
Sbjct: 273 --------IAEVELEET---ADIAGVVRSADPKRTFDRDDGSEGQVRNVRIQDATG-DIR 320
Query: 383 LTLWGDFCNKE 393
+ LWGD +K+
Sbjct: 321 VALWGDKADKD 331
>gi|167390102|ref|XP_001739210.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165897187|gb|EDR24424.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 567
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 220 RWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRV 279
+ IK V K + + N +GK+FS L D++G E +V+ FNA+VD+FY I +
Sbjct: 155 KCCIKGYVVHKSRINEFGNE--EGKIFSVILQDNEGSEFKVSFFNAMVDKFYSSIIEEQT 212
Query: 280 YLISKGSLKPAQKNFNHLKNEWEIFLEATST 310
++ K +K + +K LE T
Sbjct: 213 IVMDKIRIKKMNETSEKIKTRMMNNLEGIVT 243
>gi|414878547|tpg|DAA55678.1| TPA: hypothetical protein ZEAMMB73_083768 [Zea mays]
Length = 409
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 8/153 (5%)
Query: 247 SFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVGRVYLIS--KGSLKPAQKNFNHLKNEWEI 303
F D +G +I +T V F ++ VY + K SL + NF HL E+
Sbjct: 191 HFIFYDINGAKIEAITYMYETVKYFDNLLHEKHVYKMHNVKFSLHSGEFNFRHLNGPMEL 250
Query: 304 FLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNG 363
L+ + V+ T P + ++++I N ++VD++ IV+ ++ + +
Sbjct: 251 CLDQQTIVEPYTVPIQMAPFPKQILLNLADIAELPNRTLVDIMAIVVHLD----TIHRTM 306
Query: 364 METQRRILNLKDTSGRSVELTLWGDFCNKEGQK 396
R+I+ + D G + +WGD NK +
Sbjct: 307 WGPFRKIV-IMDARGYLHIIKVWGDLLNKNALR 338
>gi|448680564|ref|ZP_21690881.1| replication factor A [Haloarcula argentinensis DSM 12282]
gi|445769008|gb|EMA20085.1| replication factor A [Haloarcula argentinensis DSM 12282]
Length = 488
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 20/191 (10%)
Query: 205 PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARG-DGKVFSFDLLDSDGGEIRVTCF 263
P I AL Q ++ V +R ++ G +G+V + L D G IRVT +
Sbjct: 159 PGAGSSIDALTMGQSDVTLRGLVLDTDSIRTFDRDDGSEGRVSNLTLGDE-TGRIRVTLW 217
Query: 264 NAVVDRFYEIIEVGRVYLISKGSLKPAQKNFN-HLKNEWEIFLEATSTVDLCTEEDDSIP 322
+ DR E ++ G + G ++ + H+ ++ + D E D+ P
Sbjct: 218 DDRADRAEE-LDAGAAVEVIDGYVRERDGSLELHVGDQGAV----DEVEDDVAFEPDADP 272
Query: 323 KQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVE 382
I+E+E E D+ G+V S +P R +G E Q R + ++D +G +
Sbjct: 273 --------IAEVELEET---ADIAGVVRSADPKRTFDRDDGSEGQVRNVRIQDATG-DIR 320
Query: 383 LTLWGDFCNKE 393
+ LWGD +K+
Sbjct: 321 VALWGDKADKD 331
>gi|289581867|ref|YP_003480333.1| OB-fold tRNA/helicase-type nucleic acid binding protein [Natrialba
magadii ATCC 43099]
gi|289531420|gb|ADD05771.1| nucleic acid binding OB-fold tRNA/helicase-type [Natrialba magadii
ATCC 43099]
Length = 492
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 231 GDLRRYNNARG-DGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKP 289
G +R ++ G +GKV + L DS G +RVT ++ D EI E G + G +K
Sbjct: 189 GTVRTFDRDDGSEGKVSNLVLGDS-SGRVRVTLWDEQADLATEI-EAGTTVEVVDGYVKE 246
Query: 290 AQKNFN-HLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGI 348
+ H+ N A VD E +P+ + IES E VD+ G+
Sbjct: 247 RDGSLELHVGNRG-----AVEEVDAEVE---YVPES-------TSIESIEIGQEVDLAGV 291
Query: 349 VISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCN 391
V S +P R +G E Q R + ++D +G + + LWG+ +
Sbjct: 292 VRSADPKRTFDRDDGSEGQVRNIRVQDATG-DIRVALWGEKAD 333
>gi|448282722|ref|ZP_21474006.1| replication factor A [Natrialba magadii ATCC 43099]
gi|445575686|gb|ELY30154.1| replication factor A [Natrialba magadii ATCC 43099]
Length = 487
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 231 GDLRRYNNARG-DGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKP 289
G +R ++ G +GKV + L DS G +RVT ++ D EI E G + G +K
Sbjct: 184 GTVRTFDRDDGSEGKVSNLVLGDS-SGRVRVTLWDEQADLATEI-EAGTTVEVVDGYVKE 241
Query: 290 AQKNFN-HLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGI 348
+ H+ N A VD E +P+ + IES E VD+ G+
Sbjct: 242 RDGSLELHVGNRG-----AVEEVDAEVE---YVPES-------TSIESIEIGQEVDLAGV 286
Query: 349 VISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCN 391
V S +P R +G E Q R + ++D +G + + LWG+ +
Sbjct: 287 VRSADPKRTFDRDDGSEGQVRNIRVQDATG-DIRVALWGEKAD 328
>gi|448396828|ref|ZP_21569276.1| replication factor A [Haloterrigena limicola JCM 13563]
gi|445673357|gb|ELZ25918.1| replication factor A [Haloterrigena limicola JCM 13563]
Length = 482
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 233 LRRYNNARG-DGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQ 291
+R ++ G +GKV + L DS G +RVT ++ DR E+ E G + G +K
Sbjct: 186 VRTFDRDDGSEGKVSNLVLGDS-TGRVRVTLWDEQADRATEL-EAGATVEVIDGYVKERD 243
Query: 292 KNFN-HLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVI 350
H+ N V+ E+ + +P+ + IE E VD+ G+V
Sbjct: 244 GQLELHVGNR--------GAVEEVDEDVEYVPES-------TPIEDLEIGQTVDIAGVVR 288
Query: 351 SVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKE 393
S +P R +G E Q R + ++D +G + + LWG+ + +
Sbjct: 289 SADPKRTFDRDDGSEGQVRNIRVQDATG-DIRVALWGEKADTD 330
>gi|357462853|ref|XP_003601708.1| hypothetical protein MTR_3g084550 [Medicago truncatula]
gi|355490756|gb|AES71959.1| hypothetical protein MTR_3g084550 [Medicago truncatula]
Length = 231
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 84/201 (41%), Gaps = 34/201 (16%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
L+D G I V+ ++ +F E ++ G V+ IS + + +NE+++ +
Sbjct: 5 LMDRKGDRIGVSIRRTLIYKFKEQLQEGMVFTISSSDVASNSGLYRPSRNEYKLNFTINT 64
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEI--ESAENNSIVDVIGIVISVNPSVPILRKNGMETQ 367
V L + +P +SF ++ ES +NN +VDVIG++I V G+E +
Sbjct: 65 KVKLS--KTVLVPTNVYSFTPAPDVFNESYDNNYLVDVIGVMIGV----------GVERE 112
Query: 368 RRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI--G 425
+ VE L + E Q V+ + KV F GK
Sbjct: 113 YE-------TDEYVE-ELHSFLSSGESQN----------AVVVIMLAKVKLFQGKPALQN 154
Query: 426 TIPSTQLFINPDFAEAHELRE 446
ST++ NP+ E ELR+
Sbjct: 155 AFSSTRITFNPEIGETKELRK 175
>gi|358349135|ref|XP_003638595.1| hypothetical protein MTR_137s0043 [Medicago truncatula]
gi|355504530|gb|AES85733.1| hypothetical protein MTR_137s0043 [Medicago truncatula]
Length = 372
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 4/144 (2%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
L+D GG I TC +V +F +++ G Y + + + + ++ ++ + S
Sbjct: 27 LVDEKGGRIHATCRKDLVAKFRSMVQEGGAYQLENAMVGFNESPYKVTSHKHKLSMMHNS 86
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIESAENNSI-VDVIGIVISVNPSVPILRKNGMETQR 368
T +IP F F+ +EI S+ + DVIG VI + K+G + +
Sbjct: 87 T--FTKVHSPAIPMNVFEFKPFNEILSSTVEEVSTDVIGHVIE-RGDIRETEKDGRKNRV 143
Query: 369 RILNLKDTSGRSVELTLWGDFCNK 392
L L+D + +LWG+ +K
Sbjct: 144 IDLTLEDLENNRLHCSLWGEHADK 167
>gi|326508252|dbj|BAJ99393.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 333
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 517 IGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEIL 575
IG R+CNKKV + GN + C +C +E + RY L+ +I D + T T F+ ++++
Sbjct: 14 IGCRKCNKKVQKQGNHFYCPKCEKEPENTCPRYKLKLEICDLSATTTCTMFEAEAKKLI 72
>gi|357515665|ref|XP_003628121.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355522143|gb|AET02597.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
Length = 637
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 105/249 (42%), Gaps = 32/249 (12%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
I P+AA+ + ++ RV + +NN D + LLD + G+I+ + V
Sbjct: 5 ITPVAAIVAGKINIKLRVRVVHVWTVFEFNNPNEDNSIHML-LLDDNLGKIQASTKKHWV 63
Query: 268 DRFYEIIEVGRVY-----LISKGSLK--PAQKNFN-HLKNEWEIF-LEATSTVDLCTEED 318
R +E G Y L++K K Q +F +L ++ + F +AT+
Sbjct: 64 PRIRSNVEEGSTYDNENVLVTKNDPKYQVTQHSFKLNLIDKTKFFKFDATT--------- 114
Query: 319 DSIPKQQFSFRHISEI-ESAENNSIVDVIGIVISVNPSVPILRK---NGMETQRRILNLK 374
IP F F +EI E+ +VDVIG + + L++ NG ++ L L+
Sbjct: 115 --IPLNHFDFMPFNEILEAKREEKVVDVIGQAVERDE----LKEKDVNGRRSKIMDLTLQ 168
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFI 434
D R V TLW ++ + L D V+ ++ K+ + G I I +T+
Sbjct: 169 DFESRRVRCTLWANYAERMNSFLVAH-DPSSPVVVLIQHCKLKKYQG--IMGISNTKRMT 225
Query: 435 NPDFAEAHE 443
D EA E
Sbjct: 226 IEDLIEATE 234
>gi|118388117|ref|XP_001027159.1| hypothetical protein TTHERM_00726370 [Tetrahymena thermophila]
gi|89308929|gb|EAS06917.1| hypothetical protein TTHERM_00726370 [Tetrahymena thermophila
SB210]
Length = 580
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 106/238 (44%), Gaps = 27/238 (11%)
Query: 221 WAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV-VDRFYEIIEVGRV 279
+ + A+V +KG ++ K F ++ D + FN ++ +YE IE+G+V
Sbjct: 94 FIVTAKVISKGSIK----YTYQDKSFKIEIYDGSLEHSTLVYFNCQDIENYYEQIELGKV 149
Query: 280 YLISKGSL-KPAQKNFNHLKNEWEIF------LEATSTVDLCTEEDDSIPKQQFSFRHIS 332
Y S+ + K AQK ++E+F L +++L D S ++ I+
Sbjct: 150 YKFSRAIIAKDAQKKEARKCLKYEMFNSQYIQLVEDESINLIYAADFS----KYELIKIN 205
Query: 333 EIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNK 392
+I D++G+V+ PS ++ + R + +K G TL N+
Sbjct: 206 QISEQHQTDHFDILGVVME-EPSKERVKDS---EGRELDTIKFLIGDETRHTLQVSIRNE 261
Query: 393 EGQKLQEMVDVGFFPVLSVKSGKVNDFSG-KSIGTIPSTQLFINPDFAEAHELREWFD 449
G L ++ F V+ +KS VN ++ KS+ + + + +NPD +A +L F+
Sbjct: 262 YGLNL----NLKIFDVVLIKSTHVNVYANQKSVDS--GSGILVNPDIQQALDLLYSFE 313
>gi|147769421|emb|CAN65830.1| hypothetical protein VITISV_038135 [Vitis vinifera]
Length = 904
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 347 GIVISVNPSVPILRKNGME-TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGF 405
G+V SV+P++ I RK+ + +R + + D + +SV ++LW D GQ+L + D
Sbjct: 766 GVVQSVSPTMSIRRKSNKDIVPKRDITIADKTKKSVVVSLWNDHGTNVGQELLDNADK-- 823
Query: 406 FPVLSVKSGKVND 418
FP++++KS KV +
Sbjct: 824 FPIVAIKSLKVGE 836
>gi|301071243|gb|ADK55677.1| RPA1-like protein 1 [Tetrahymena thermophila]
Length = 505
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 103/238 (43%), Gaps = 27/238 (11%)
Query: 221 WAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV-VDRFYEIIEVGRV 279
+ + A+V +KG ++ K F ++ D + FN ++ +YE IE+G+V
Sbjct: 19 FIVTAKVISKGSIK----YTYQDKSFKIEIYDGSLEHSTLVYFNCQDIENYYEQIELGKV 74
Query: 280 YLISKGSL-KPAQKNFNHLKNEWEIF------LEATSTVDLCTEEDDSIPKQQFSFRHIS 332
Y S+ + K AQK ++E+F L +++L D S ++ I+
Sbjct: 75 YKFSRAIIAKDAQKKEARKCLKYEMFNSQYIQLVEDESINLIYAADFS----KYELIKIN 130
Query: 333 EIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNK 392
+I D++G+V+ + G R + +K G TL N+
Sbjct: 131 QISEQHQTDHFDILGVVMEEPSKERVKDSEG----RELDTIKFLIGDETRHTLQVSIRNE 186
Query: 393 EGQKLQEMVDVGFFPVLSVKSGKVNDFSG-KSIGTIPSTQLFINPDFAEAHELREWFD 449
G L ++ F V+ +KS VN ++ KS+ + + + +NPD +A +L F+
Sbjct: 187 YGLNL----NLKIFDVVLIKSTHVNVYANQKSVDS--GSGILVNPDIQQALDLLYSFE 238
>gi|357458969|ref|XP_003599765.1| Fgenesh protein, partial [Medicago truncatula]
gi|355488813|gb|AES70016.1| Fgenesh protein, partial [Medicago truncatula]
Length = 239
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 78/200 (39%), Gaps = 33/200 (16%)
Query: 210 PIAAL---NPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFD--LLDSDGGEIRVTCFN 264
PI +L P + W I+ RV L R ++ G+V + LLD DG I+ T
Sbjct: 4 PITSLLNVRPPRMAWNIRVRVVR---LWRIMSSLVRGRVIFMEMVLLDQDGNRIQATIPP 60
Query: 265 AVVDRFYEIIEVGRVYLISKGSLKPAQK-----NFNHLKNEWEIFLEATSTVDLCTEEDD 319
VDRF RVY+ S + P + + NH WE + D
Sbjct: 61 DCVDRFQNTFHENRVYMFSNFKVLPNDRSTRVTSHNHRLKLWE---------ETVVVNHD 111
Query: 320 SIPKQQFSFRHISEIESAENN----SIVDVIGIVISVNPSVPILRKNGMETQRRI----- 370
Q+F F S + E+ ++DV G++ S++ + + + T R
Sbjct: 112 GYIIQRFGFSFFSSAQILEHQHGCGHLIDVFGLLTSLHYDFVVDARQNLATIARFGLTDE 171
Query: 371 -LNLKDTSGRSVELTLWGDF 389
+ G ++E L+G F
Sbjct: 172 RFDFYQCRG-TIECVLYGRF 190
>gi|448494503|ref|ZP_21609490.1| replication factor A [Halorubrum californiensis DSM 19288]
gi|445689338|gb|ELZ41578.1| replication factor A [Halorubrum californiensis DSM 19288]
Length = 497
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
G +RVT ++ D E + G V + G ++ + E+ + TV+
Sbjct: 210 GRVRVTLWDDKAD-LAEEFDPGEVVEVGDGYVRERDGDL-------ELHVGDRGTVERVD 261
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKD 375
E+ + +P+ ++I E + VD+ G VI +P R +G E Q R + +KD
Sbjct: 262 EDVEYVPE-------TTDIADLEIDQTVDIGGGVIETDPKRTFDRDDGSEGQVRNVRIKD 314
Query: 376 TSGRSVELTLWGDFCNKE 393
+G + + LWGD ++E
Sbjct: 315 ETG-EIRVALWGDKADRE 331
>gi|38346586|emb|CAE04650.2| OSJNBa0061G20.6 [Oryza sativa Japonica Group]
Length = 1410
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 81/184 (44%), Gaps = 10/184 (5%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVF--SFDLLDSDGGEIRVTCFNAVVD 268
I+ L P G I R++ + +N+ + D + + L+D G I F
Sbjct: 636 ISKLEPGLGNPRIYVRLSR---MWNFNDPKDDISLLHVALVLVDETEGSIAAQIFPPDGK 692
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
F ++ G++Y ++ ++ +++ + N I + V+ S P +S
Sbjct: 693 LFKPLLSEGKIYYLTHYIVRNCSRSYKPVSNSLAIAFTGWTIVEEYVNAPTSFPFYTYSL 752
Query: 329 RHISEIESAENN--SIVDVIGIVISVNP--SVPILRKNGMETQRRILNLKDTSGRSVELT 384
+ +++ + +N S D IG++ V+ SV ++G +R + + D + ++ ++
Sbjct: 753 KSFNQLTALLDNKDSFTDTIGVITEVSSITSVRSRTRDGDSLKRNVF-ISDANNATIRVS 811
Query: 385 LWGD 388
LWGD
Sbjct: 812 LWGD 815
>gi|448356409|ref|ZP_21545142.1| replication factor A [Natrialba chahannaoensis JCM 10990]
gi|445653442|gb|ELZ06313.1| replication factor A [Natrialba chahannaoensis JCM 10990]
Length = 490
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 231 GDLRRYNNARG-DGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKP 289
G +R ++ G +GKV + L DS G +RVT ++ D EI E G + G +K
Sbjct: 184 GTVRTFDRDDGSEGKVSNLVLGDSTG-RVRVTLWDEQADLATEI-ETGTTVEVVDGYVKE 241
Query: 290 AQKNFN-HLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGI 348
+ H+ N A VD E +P+ + IES E VD+ G+
Sbjct: 242 RDGSLELHVGNRG-----AVEEVDAEVE---YVPES-------TSIESIEIGQEVDLAGV 286
Query: 349 VISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCN 391
V S +P R +G E Q R + ++D +G + + LWG+ +
Sbjct: 287 VRSADPKRTFDRDDGSEGQVRNIRVQDATG-DIRVALWGEKAD 328
>gi|448376675|ref|ZP_21559675.1| replication factor A [Halovivax asiaticus JCM 14624]
gi|445656411|gb|ELZ09245.1| replication factor A [Halovivax asiaticus JCM 14624]
Length = 476
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 20/169 (11%)
Query: 225 ARVTAKGDLRRYNNARGD-GKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLIS 283
V G +R ++ G GKV + L D + G +RVT ++ D EI + V +
Sbjct: 178 GEVLETGSIRTFDRDDGSKGKVSNLTLGD-ETGRVRVTLWDEQADLATEIDD-SEVVEVV 235
Query: 284 KGSLKPAQKNFN-HLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSI 342
G +K N H+ N+ TV++ E+ +P + IE E +
Sbjct: 236 DGYVKERDGNLELHVGNQ--------GTVEVVDEDVQYVPDS-------TPIEDVEIDQT 280
Query: 343 VDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCN 391
VD+ G+V S +P R +G E Q R + ++D +G + + LWG+ +
Sbjct: 281 VDLKGVVRSADPVRTFDRDDGSEGQVRNIRVQDATG-DLRVALWGEKAD 328
>gi|297797958|ref|XP_002866863.1| hypothetical protein ARALYDRAFT_912430 [Arabidopsis lyrata subsp.
lyrata]
gi|297312699|gb|EFH43122.1| hypothetical protein ARALYDRAFT_912430 [Arabidopsis lyrata subsp.
lyrata]
Length = 244
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 78/184 (42%), Gaps = 9/184 (4%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGD-GKVFSFDLLDSDGGEIRVTCFNAVVDR 269
I +NP + IK + LR + + D G L+D G I T + + +
Sbjct: 14 IDDINPIHDQNKIKVLI-----LRLWKAYQRDAGNTIEMVLVDEKGSRIHATVEDKNIKK 68
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQF-SF 328
F +++ G V ++ L ++ ++I T+ V C + +P++ F F
Sbjct: 69 FDSVLKEGDVVTLNPFKLIKYSGDYKSNSLSFKILFYRTTQVKPCDDFPKEVPEKYFVEF 128
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD 388
+ S + VDVIG +++V P + ++ G T + + L+D + TLW D
Sbjct: 129 GDVLN-GSRDTRVFVDVIGQIVNVGP-IEDIKIRGKSTPKLDVELRDRGNVRLICTLWAD 186
Query: 389 FCNK 392
F +
Sbjct: 187 FAKQ 190
>gi|297727013|ref|NP_001175870.1| Os09g0456900 [Oryza sativa Japonica Group]
gi|255678952|dbj|BAH94598.1| Os09g0456900 [Oryza sativa Japonica Group]
Length = 206
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 4/168 (2%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
I+ L P G I+ RV+ + R N+ + L+D G I + + F
Sbjct: 20 ISKLEPGLGNPTIRLRVSRFWEFRDQNDENILYHL-GLVLVDGTGASIAAQIMPPLDELF 78
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRH 330
I G+VY ++ ++ + + N I L ST++ CT+ ++ P +S
Sbjct: 79 APAITEGKVYDLTFYRVRQCTSQYRPVGNMQSIALTKWSTLEECTDVPENFPNYVYSLTP 138
Query: 331 ISEIESAEN--NSIVDVIGIVISVNPSVPI-LRKNGMETQRRILNLKD 375
++ N +S D IGI+ + PI R E+ +R + ++D
Sbjct: 139 YDQLRGRVNRKDSFTDAIGIITEITSVTPIQTRTKDGESLKRSIYIRD 186
>gi|297813529|ref|XP_002874648.1| hypothetical protein ARALYDRAFT_352148 [Arabidopsis lyrata subsp.
lyrata]
gi|297320485|gb|EFH50907.1| hypothetical protein ARALYDRAFT_352148 [Arabidopsis lyrata subsp.
lyrata]
Length = 331
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 112/287 (39%), Gaps = 26/287 (9%)
Query: 200 LKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGE 257
L+ + P I PI+ L I R+ + N + DLL D G
Sbjct: 3 LQKDMPLDITPISQLTLGTDPCKINVRIVRLWGFPKKNKPE---EFTGIDLLIVDEKGSR 59
Query: 258 IRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEI-FLEATSTVDLCTE 316
I+ + ++D+F + ++ G+ ++ L P F + ++I F+ T C +
Sbjct: 60 IQASVKGKLLDKFQKDLKEGKCCVLMNFELCPNLGKFRSCDHPYKINFIFYT-----CVK 114
Query: 317 EDDSIPKQQ--FSFRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILN 372
+ IP + F+ EI + N+ +D+IG ++ +N I G T+ L
Sbjct: 115 PSEEIPNLEACFNLCPFPEILARRNDDTIFIDIIGEIVGMNEVKSITTAEG-PTKLLNLQ 173
Query: 373 LKDTSGRSVELTLWGD-----FCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTI 427
LKD +++ LWG + N + Q +V +G + GK S K
Sbjct: 174 LKDLGDSLIDVALWGKLAEDVYSNIKSQPSGPVVFLGSLMKTLLYQGKGTVQSSKF---- 229
Query: 428 PSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIAAGGAKNEIH 474
+T+ +IN E + +E + A I +A +K H
Sbjct: 230 -TTKAYINSPLPEILQFQEALCNEEPRLAITEIISSKSAHISKQSFH 275
>gi|402220416|gb|EJU00488.1| hypothetical protein DACRYDRAFT_109206 [Dacryopinax sp. DJM-731
SS1]
Length = 109
Score = 43.5 bits (101), Expect = 0.36, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 274 IEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISE 333
+E G+VY +L+ A+ + N W++ L ++ IPK F F H++
Sbjct: 13 LETGKVYAFEGLALEEAKLKYMRANNWWQLQLHTECACVWNIVDNGLIPKIYFDFHHLNV 72
Query: 334 IESAENNSIVDVIGIVI 350
+E + N VD++GI++
Sbjct: 73 LEKIDANQHVDIVGIIL 89
>gi|391334312|ref|XP_003741549.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 232
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 11/213 (5%)
Query: 241 GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNE 300
G G VF +L GEI + + + +I VG+ Y I+ +K + ++E
Sbjct: 15 GLGTVFPNFVLSDTSGEINLIASRDSTEEIFGMITVGQGYKINAFKVKAVNPQYRATEHE 74
Query: 301 WEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILR 360
E+ L S + T D +PK Q + E+ S N+ VDV+ +V V P
Sbjct: 75 CELQLTKLSKLVPITGND--LPKTQAQTTLLIELLSKPVNTTVDVLVVVFDVRPPQTFNC 132
Query: 361 KNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFS 420
++G+ +++ + + D + V L +W +F K K + V +K+ V D++
Sbjct: 133 RDGINREKQTVTVLDDCMKMVNLGIWSEFVGKLDGKEGDAV--------ILKNLHVRDYN 184
Query: 421 G-KSIGTIPSTQLFINPDFAEAHELREWFDSGG 452
G + T +T + AEA L++WF + G
Sbjct: 185 GTRQPSTTTNTIIREAGRDAEAERLQKWFKTDG 217
>gi|413916177|gb|AFW56109.1| hypothetical protein ZEAMMB73_034381 [Zea mays]
Length = 368
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Query: 220 RWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVG 277
+++I ARV K + R+ + + F L D +G +I +T V F ++
Sbjct: 206 KYSIVARVEVKFPIEPRFRDRQ------HFVLSDINGAKIEAITYMYETVKHFDNLLHEK 259
Query: 278 RVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
VY + K SL P + NF HL E+ L+ + V+ T P + ++++I
Sbjct: 260 HVYKMHNVKFSLHPGEFNFRHLNGPMELCLDQQTIVEPYTVPIQMAPFPKQILLNLADIA 319
Query: 336 SAENNSIVDVIGIVISVN 353
N ++VD++ +V+ ++
Sbjct: 320 ELPNRTLVDIMAVVVHLD 337
>gi|402223681|gb|EJU03745.1| hypothetical protein DACRYDRAFT_105902 [Dacryopinax sp. DJM-731
SS1]
Length = 432
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 161/417 (38%), Gaps = 68/417 (16%)
Query: 260 VTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTE--- 316
+T V+D + VG V + L+ Q +K W L + VD +
Sbjct: 6 LTLKEEVIDGLLKNAAVGVVMHLESVCLQETQ-----VKYLWNGLLPIEAVVDHNSRIEF 60
Query: 317 --EDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV------NPSVPILRKNG----- 363
+D SIP IS + + + + V++IG+V+ V + + RK+G
Sbjct: 61 PLQDHSIPPLSLELTKISLLRATKVGTEVNIIGVVLHVGKVEAMSEKKRVARKSGDGESK 120
Query: 364 -------METQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKV 416
E RR + L D S + + LW D K +L +K +
Sbjct: 121 SKEEDPKGERVRREVQLVDDSAHIMCVALWKDCATSMAMK--------HGSILLLKKVVI 172
Query: 417 NDFSGKSIGTIPSTQLFINPDFAEAHELREWFDSGGKNAATV-SISREIAAG-GAKNEIH 474
G S+ T++ + AE L+ W+++ N T IS + G G +I
Sbjct: 173 AAHDGISLNMYKKTKVDKDLKVAEGTSLKNWYNNLASNPQTFQHISSSYSTGSGLFTDIE 232
Query: 475 K-----TVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQS 529
T+ +++ LG S V I + ++ Y AC + CNK + +S
Sbjct: 233 PCLNVLTIPEVQKSNLGTSSCIHTFNVEGCIQVVDGNAV-YEACT----NTHCNKGIEKS 287
Query: 530 GNRWQCDRCNQEIDECDYR---YLLQAQI-QDQTGLTWVTAFQESGEEILGCPAKELYML 585
CD E D R Y L+ I QD V+ F +++L A E+
Sbjct: 288 ----PCDIEGHEDMSDDNRRFCYHLKLTIGQDHRHSIDVSVFMLLADKMLEEDAMEVVKK 343
Query: 586 KYEL--QDDVRFGEIIRSRVFNQYLFRLKIKEELYGDE------QRVKITVIRADQV 634
+ + Q D G +++++ + F ++ +L+ +E +++ + RA+Q+
Sbjct: 344 RDHMPGQSDEVLGALLKTK----WRFTIQACTQLWKNEWSSEWSRKLTYVMTRAEQL 396
>gi|297817956|ref|XP_002876861.1| hypothetical protein ARALYDRAFT_904572 [Arabidopsis lyrata subsp.
lyrata]
gi|297322699|gb|EFH53120.1| hypothetical protein ARALYDRAFT_904572 [Arabidopsis lyrata subsp.
lyrata]
Length = 303
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 78/184 (42%), Gaps = 9/184 (4%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGD-GKVFSFDLLDSDGGEIRVTCFNAVVDR 269
I +NP + IK + LR + + D G L+D G I T + + +
Sbjct: 14 IDDINPIHDQNKIKVLI-----LRLWKAYQRDAGNTIEMVLVDEKGSRIHATVEDKNIKK 68
Query: 270 FYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQF-SF 328
F +++ G V ++ L ++ ++I T+ V C + +P++ F F
Sbjct: 69 FDSVLKEGDVVTLNPFKLIKYSGDYKSNSLSFKILFYRTTQVKPCDDFPKEVPEKYFVEF 128
Query: 329 RHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD 388
+ S + VDVIG +++V P + ++ G T + + L+D + TLW D
Sbjct: 129 GDVLN-GSRDTRVFVDVIGQIVNVGP-IEDIKIRGKSTPKLDVELRDRGNVRLICTLWAD 186
Query: 389 FCNK 392
F +
Sbjct: 187 FAKQ 190
>gi|357488297|ref|XP_003614436.1| Replication protein A1-like protein [Medicago truncatula]
gi|355515771|gb|AES97394.1| Replication protein A1-like protein [Medicago truncatula]
Length = 578
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 47/257 (18%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF 270
I +N ++ W I RV D+ N++ + L D + I++ + D+F
Sbjct: 73 IKNINDFKSLWKIAVRVV---DMWTVANSKNKQHI-EMVLCDKEVDRIQIILPFELKDQF 128
Query: 271 YEIIEVGRVYLISKGSLKPAQKNFNHLKNE----------WEIFLEATSTVDLCTEEDDS 320
GR+ + +L+ NF+ KNE W +F TS VD + D
Sbjct: 129 K-----GRIVENTTFTLQ----NFDVEKNEMSIKATDHPFWLVFNGGTS-VDNIDKHD-- 176
Query: 321 IPKQQFSFRHISEIE--SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILN----LK 374
IPK F+F+ EI+ + + ++DVIG + L N + R + +K
Sbjct: 177 IPKPSFNFKDFDEIKKGALRPDVLIDVIG-------AFHELGYNQTQAGSRKIQINFWMK 229
Query: 375 DTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFP-VLSVKSGKVNDFSGK-SIG---TIPS 429
D G + TLW DF Q L + F P ++ + + K+ + + K +G +
Sbjct: 230 DLKGTLLSCTLWEDFG---LQFLNFCNNSEFGPTIILLHNAKIKEATYKYELGVSNAWNA 286
Query: 430 TQLFINPDFAEAHELRE 446
T+LFINP+F E E ++
Sbjct: 287 TKLFINPEFLEVLEFKQ 303
>gi|448336089|ref|ZP_21525200.1| replication factor A [Natrinema pallidum DSM 3751]
gi|445630447|gb|ELY83712.1| replication factor A [Natrinema pallidum DSM 3751]
Length = 488
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 233 LRRYNNARG-DGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQ 291
+R ++ G +GKV + L DS G +RVT ++ D E+ E G + G +K
Sbjct: 186 VRTFDRDDGSEGKVSNLVLGDS-TGRVRVTLWDEQADLATEL-EAGTTVEVIDGYVKDRD 243
Query: 292 KNFN-HLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVI 350
+ H+ N A +D E +P+ + IE E + +VD+ G+V
Sbjct: 244 GSLELHVGNRG-----AVEEIDATVE---YVPEN-------TPIEDVEIDHVVDIAGVVR 288
Query: 351 SVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCN 391
S +P R +G E Q R + ++D + + + LWGD +
Sbjct: 289 SADPKRTFDRDDGSEGQVRNIRVQDAT-DDIRVALWGDKAD 328
>gi|242041191|ref|XP_002467990.1| hypothetical protein SORBIDRAFT_01g037710 [Sorghum bicolor]
gi|241921844|gb|EER94988.1| hypothetical protein SORBIDRAFT_01g037710 [Sorghum bicolor]
Length = 55
Score = 43.1 bits (100), Expect = 0.48, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 18/70 (25%)
Query: 378 GRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPD 437
G++V ++LW D GQ+L +MVD PV+++KS KV+DF D
Sbjct: 4 GKTVSISLWDDLATTTGQELLDMVDSS--PVIAMKSLKVSDFQ----------------D 45
Query: 438 FAEAHELREW 447
EA L+ W
Sbjct: 46 LPEAQNLKSW 55
>gi|294875670|ref|XP_002767428.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239868995|gb|EER00146.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 162
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 510 YTACPLMIGD-----RQCNKKVTQ--SGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLT 562
YT+C I D R+C+KKV Q S W C +Q +C RY++ ++ D +G
Sbjct: 48 YTSCITEIPDGRGGIRKCSKKVEQDISTGTWSCIEGHQN-PQCMPRYIISIKLADISGEV 106
Query: 563 WVTAFQESGEEILGCPAKEL 582
V AF E + +LG A+ +
Sbjct: 107 MVRAFDEQAQALLGVSAQNM 126
>gi|448627026|ref|ZP_21671701.1| replication factor A [Haloarcula vallismortis ATCC 29715]
gi|445759654|gb|EMA10930.1| replication factor A [Haloarcula vallismortis ATCC 29715]
Length = 490
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 20/191 (10%)
Query: 205 PARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARG-DGKVFSFDLLDSDGGEIRVTCF 263
P I AL Q ++ V +R ++ G +G+V + L D + G IRVT +
Sbjct: 159 PGAGSSIDALTMGQSDVTLRGLVLDTDTIRTFDRDDGSEGRVSNLTLGD-ETGRIRVTLW 217
Query: 264 NAVVDRFYEIIEVGRVYLISKGSLKPAQKNFN-HLKNEWEIFLEATSTVDLCTEEDDSIP 322
+ DR E+ + G I G ++ + H+ ++ + D E D+ P
Sbjct: 218 DDRADRAEEL-DSGAAVEIIDGYVRERDGSLELHVGDQGAV----DEVEDDVAFEPDADP 272
Query: 323 KQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVE 382
+ + VD+ G+V S +P R +G E Q R + ++D +G +
Sbjct: 273 IAEVALEET-----------VDIAGVVRSADPKRTFDRDDGSEGQVRNVRIQDATG-DIR 320
Query: 383 LTLWGDFCNKE 393
+ LWGD +K+
Sbjct: 321 VALWGDKADKD 331
>gi|392889706|ref|NP_494734.3| Protein R03H10.7 [Caenorhabditis elegans]
gi|351062334|emb|CCD70304.1| Protein R03H10.7 [Caenorhabditis elegans]
Length = 359
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 106/256 (41%), Gaps = 14/256 (5%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV 267
+ PI L + I RVT D R ++ + K F+F++ D +G I + +
Sbjct: 114 VTPIENLKESVNYFKIHGRVTLM-DTRPPHHYQ---KRFNFEITDFNGDTIACSASSPEA 169
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
D FY+ + + Y ++ G +K + +N +++I L + ++ ++PK F+
Sbjct: 170 DVFYQNLVKEQSYYLAGGHIKKGHEIYNQTGIDYQIDLNNFTIMEPAPTL-LTLPK--FN 226
Query: 328 FRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWG 387
+ + + A +DV+ + +R + + D S + T WG
Sbjct: 227 IQRVFLSDVANVKKPIDVLVCIKEFKDVENYTPTENKPPHKRHIQVIDDSKSEIRATFWG 286
Query: 388 DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTI-PSTQLFINPDFAEAHELRE 446
N +E ++ V++ K + +G+ +I P T++ I P+ A L
Sbjct: 287 --YNAVDAIREEFLN----KVVAFKGVIPTEGNGQLFLSITPGTRIVIQPEVDGAAYLEA 340
Query: 447 WFDSGGKNAATVSISR 462
WFD A +IS+
Sbjct: 341 WFDGYNARGAITTISQ 356
>gi|357511465|ref|XP_003626021.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355501036|gb|AES82239.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
Length = 887
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 408 VLSVKSGKVNDFSGKSI--GTIPSTQLFINPDFAEAHELREWFDSGGKNAATVSISREIA 465
V++V+ K+ F G+++ TI +T++ NP F A L++ ++ + IS+
Sbjct: 277 VVAVQLTKIKIFQGQAMIQNTINATKVLFNPTFTAALLLKKRM-VENDDSPSPDISKITE 335
Query: 466 AGGAKNEIHKTVSQIKN-EGLGRSEKPDWVTVRAFITFIKSDS-FCYTACPLMIGDRQCN 523
A E +S + EGL + EK + V + I DS + YT+C + CN
Sbjct: 336 ASKVSVEDFLNLSPMTTVEGL-KEEK--FFAVFGTVNVIVDDSDWWYTSCVV------CN 386
Query: 524 KKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEIL 575
KKV + C +CN +Y+++ ++ D T F E+
Sbjct: 387 KKVYPDEKMYFCSKCN--------KYMIKMKVVDHTDFATFVLFDRDAAELF 430
>gi|357516565|ref|XP_003628571.1| Fgenesh protein [Medicago truncatula]
gi|355522593|gb|AET03047.1| Fgenesh protein [Medicago truncatula]
Length = 725
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 71/365 (19%), Positives = 151/365 (41%), Gaps = 34/365 (9%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNAVVD 268
+ AL+P + +I RV D+ + G+V S +LL D +G + T V+
Sbjct: 191 LVALDPDKTNCSIMVRVLRLWDV---ESTLMPGRVNSSELLLMDIEGYRMHATVPPFCVE 247
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
+F ++ RVY+I+ S+ P F + + I + DL +IP+ + S
Sbjct: 248 KFRHMLVENRVYIITMFSVLPNLDEFMSTSSAYRIVFHQDT--DLMATTCSAIPECRLSL 305
Query: 329 RHISEI--ESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRS-VELTL 385
+++ ++ + VDVIG++ +++ + N + + +L + T R+ E L
Sbjct: 306 ITSADLLKKTRGCSYAVDVIGLLTAMHHEYFLDSTNHLSS---VLKFELTDERTKFECAL 362
Query: 386 WGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPS--TQLFINPDFAEAHE 443
G + + L++ V + P++ ++ +V +G + T++ NP E +
Sbjct: 363 TGKYIGIFHELLKK-VQLR-LPIVVIQFARVIAENGTPVVCAEKDITKVSFNPTIPEVTQ 420
Query: 444 LREWFDSGGKNAATVS------ISREIAAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVR 497
++ G ++ V +S +++ +K K++ ++ L E +V
Sbjct: 421 FQDRLLIAGPKSSIVKFNPNFRMSVDVSLSFSKMYPKKSIKEL----LVPPEGGFFVVCA 476
Query: 498 AFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQIQD 557
F K D + Y C CN + + CD C++ ++ + ++D
Sbjct: 477 RVAGFRKVDQWFYPVC-------DCNSFMGNEFGFYLCDVCHRTSFNVTPKFRFELSVED 529
Query: 558 QTGLT 562
G+
Sbjct: 530 DGGVA 534
>gi|448307001|ref|ZP_21496902.1| replication factor A [Natronorubrum bangense JCM 10635]
gi|445596548|gb|ELY50633.1| replication factor A [Natronorubrum bangense JCM 10635]
Length = 483
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 231 GDLRRYNNARG-DGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKP 289
G +R ++ G +GKV + L DS G +RVT ++ D EI V +I G +K
Sbjct: 184 GSVRTFDRDDGSEGKVSNLTLGDSTG-RVRVTLWDEQADLATEIESNTTVEVI-DGYVKE 241
Query: 290 AQKNFN-HLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGI 348
+ H+ N V+ E+ + +P+ + IE+ E VD+ G+
Sbjct: 242 RDGSLELHVGNR--------GAVEEVDEDVEYVPES-------TPIEAVEIGQTVDIAGV 286
Query: 349 VISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKE 393
V S +P R +G E Q R + ++D +G + + LWG+ + +
Sbjct: 287 VRSADPKRTFDRDDGSEGQVRNIRVQDATG-DIRVALWGEKADHD 330
>gi|312136409|ref|YP_004003746.1| nucleic acid binding ob-fold tRNA/helicase-type [Methanothermus
fervidus DSM 2088]
gi|311224128|gb|ADP76984.1| nucleic acid binding OB-fold tRNA/helicase-type [Methanothermus
fervidus DSM 2088]
Length = 791
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 100/235 (42%), Gaps = 27/235 (11%)
Query: 207 RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV 266
+ I I + Q + R+ +R Y +GK+ + L D D GEIR +N
Sbjct: 183 KFIKIGEITGDQSEVNVMGRIVHISPIRTYKRDGKEGKMAAIKLKD-DSGEIRYLLWNRD 241
Query: 267 VDRFYEI-IEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQ 325
VD ++ ++ G I ++ EI+L + + + D +PK +
Sbjct: 242 VDIINDLKLKEGDAVKILGAQVRERDD---------EIYL-SHGGLSRIEKGDYDVPKFK 291
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
I E+ E + V VIG+V V V R +G + + + +KD +G S + L
Sbjct: 292 PKVHKIGELHGEERD--VTVIGLVTKVQDIVKFERPDGTKGAVKSIKIKDDTG-STYVKL 348
Query: 386 WGDFCNKEGQKLQEMVDVGFFPVLSVKSGKV--NDF-SGKSIGTIPSTQLFINPD 437
WG E KL+ + V+ V G V +DF S I T +T++ INP+
Sbjct: 349 WG-----EDAKLK----INKGDVIKVVGGNVVFDDFTSSYCINTNWNTRIEINPE 394
>gi|443897150|dbj|GAC74492.1| invasion-inducing protein TIAM1/CDC24 [Pseudozyma antarctica T-34]
Length = 2242
Score = 42.7 bits (99), Expect = 0.65, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 16/125 (12%)
Query: 111 SESELTAQKTIPSNNLPQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAP 170
+E+ A + +++ PV +P S +L N G PG FSTP T R P
Sbjct: 1094 AEAAAHASRQASGSSVTSPVAYAEGVSPGSSVADLANGGAHEPHTPGGFSTPGYAT-RLP 1152
Query: 171 NAGSIVRSFQPT--------VQPPYQ-PPPNFRN-HGPILKNEAPARI-----IPIAALN 215
++GS+VRS + +Q Q P F N +G L +P+ + IP L+
Sbjct: 1153 SSGSLVRSASSSGSTARDYMLQGSNQLLTPQFMNTNGTALLARSPSFVKPSWSIPQDGLS 1212
Query: 216 PYQGR 220
P Q R
Sbjct: 1213 PTQKR 1217
>gi|399575764|ref|ZP_10769522.1| single-stranded DNA-binding protein [Halogranum salarium B-1]
gi|399240032|gb|EJN60958.1| single-stranded DNA-binding protein [Halogranum salarium B-1]
Length = 492
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 86/199 (43%), Gaps = 26/199 (13%)
Query: 204 APARIIPIAALNPYQ--------GRWAIKARVTAKGDLRRYNNARG-DGKVFSFDLLDSD 254
AP + + L+ Y+ +K +V ++R ++ G +G+V + + D +
Sbjct: 151 APGEDVDVQVLDTYRVEDLSLGLSDVNLKGKVLDTSEIRTFDRDDGSEGRVANLTVGD-E 209
Query: 255 GGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLC 314
G +RVT ++ DR E+ G + G ++ + E+ + + V+
Sbjct: 210 TGRVRVTLWDEQADRADELA-TGVTVEVVDGYVRERDGSL-------ELHVGSRGAVEEL 261
Query: 315 TEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLK 374
EE +P ++IE E VD+ G VI +P R +G + Q R + +K
Sbjct: 262 DEEVQYVP-------DTADIEDLEIGQTVDIAGGVIETDPKRTFDRDDGSQGQVRNIRVK 314
Query: 375 DTSGRSVELTLWGDFCNKE 393
D +G + + LWG+ + +
Sbjct: 315 DDTGE-IRVALWGEKADTD 332
>gi|357451089|ref|XP_003595821.1| Replication factor A protein [Medicago truncatula]
gi|124360115|gb|ABN08131.1| Nucleic acid-binding, OB-fold, subgroup [Medicago truncatula]
gi|355484869|gb|AES66072.1| Replication factor A protein [Medicago truncatula]
Length = 185
Score = 42.7 bits (99), Expect = 0.68, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
L+D+ G +I T ++ +F + ++ G+VY +S + ++ K+E+++ + +
Sbjct: 3 LMDASGNKIHATVRRTLIYKFEKDLQEGKVYSMSGFGVAANLGSYRTTKHEYKLNFQFNT 62
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQ 367
V LC + +S+P + + + ++E ++ +VDV+G++ V R NG +T+
Sbjct: 63 KVKLCGK--NSVPDDIYPISNSIVVFNSEYDTDYLVDVMGMLTGVGMQREYER-NGAKTK 119
Query: 368 RRILNLKDTSGRSVELTLWGDFCNK 392
+ L + G ++TL+G + ++
Sbjct: 120 MVAMKL-NYDGFKFKVTLFGQYADE 143
>gi|313799088|gb|ADR82154.1| DNA-directed RNA polymerase subunit beta [Mycoplasma sp. 1220]
Length = 1345
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 385 LWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHEL 444
+W D+ NK + L ++ D+GFF S KSG S + T+PST+ I A++L
Sbjct: 799 VWFDYTNKVAKILDKIKDLGFF--YSTKSGTT--ISMNDVTTVPSTKEKIKDGEIYANQL 854
Query: 445 REWFDSG 451
+E+F+ G
Sbjct: 855 KEYFEKG 861
>gi|357146217|ref|XP_003573915.1| PREDICTED: uncharacterized protein LOC100821223 [Brachypodium
distachyon]
Length = 234
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Query: 220 RWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRV 279
RW++ RV K + R + R K +F LLD++G ++ T ++ VDR +++ G
Sbjct: 22 RWSLCLRVYHKFHVERIGHGR---KRVNFVLLDAEGTKMAATIYDDQVDRLDPLLKEGIA 78
Query: 280 YLISKGSLKPAQKNFNHL--KNEWEI-FLEATSTVDLCTEEDDSIPKQQFSFRHISEI-- 334
Y +S S++P + N +E F T ++ + +IP F I
Sbjct: 79 YYVSMMSVEPISSTQRRMFADNPYECHFTSVTQVFEMRNMGEGTIPFFP-PFLPCDRIFP 137
Query: 335 ESAENNSIVDVIGIVISVN 353
+ N+ VDVIG+V+ V+
Sbjct: 138 STLYNDIYVDVIGMVLYVS 156
>gi|388496496|gb|AFK36314.1| unknown [Lotus japonicus]
Length = 242
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
L+DS G +I + +V RF+ ++ GRVY IS + +F ++++I +
Sbjct: 46 LMDSKGCQIHASVRKTLVYRFHPLLTEGRVYQISYFGVGDNLGDFRTTTHQFKINFHIHT 105
Query: 310 TVDLCTEEDDSIP--KQQFSFRHISEI--ESAENNSIVDVIGIVISVNPSVPILRKNGME 365
V +E + P K +SF +SEI + + ++D+IGI+ + K+G +
Sbjct: 106 KV----KEIGNCPITKSPYSFISLSEIMFNDPDPSYLMDIIGILTGSSGEQE-YEKDG-K 159
Query: 366 TQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFF-PVLSVKSGKVNDFSGK-S 423
Q+R+ G +E +G++ GQ L ++ V+ V+ K+ F G+ S
Sbjct: 160 IQKRVTIELFQDGVRLECAFFGNYV---GQILGQLAAGDMTNAVVVVQYAKIKPFRGRPS 216
Query: 424 IGTI-PSTQLFINPD 437
+ + +T++ NPD
Sbjct: 217 VQNVYGATKILFNPD 231
>gi|357441937|ref|XP_003591246.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
gi|355480294|gb|AES61497.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 524
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 144/350 (41%), Gaps = 41/350 (11%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
L+D+ GG I T +V RF ++E G Y + + + + ++ ++ + S
Sbjct: 46 LVDAKGGRIHATVRKDLVARFRSMVEEGATYELHNAIVAINEGPYKITSHKHKLGMLHNS 105
Query: 310 TVDLCTEED-DSIPKQQFSFRHISEIESAE-NNSIVDVIGIVISVNPSVPILRKNGMETQ 367
+ T++D +IP F F +EI S+ + DVIG VI V G +++
Sbjct: 106 SF---TKKDLPTIPINVFDFMSFNEILSSNVEETSADVIGHVIE-RGDVKETENEGRKSK 161
Query: 368 RRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFF--------PVLSVKSGKVNDF 419
L L+D + +LWG+ +K V FF VL ++ K +
Sbjct: 162 VIDLTLQDLENNRLHCSLWGEHADK---------IVSFFVNHDNSSPVVLILQFCKTRKY 212
Query: 420 SGKSIGTIPS---TQLFINPDFAEAHELREWFDSGGKNA--ATVSISR-EIAAGGAKNEI 473
G ++G + + T+L +N D E+ + K + T S+S+ I + + ++
Sbjct: 213 LG-AMGIVNAFYGTKLILNGDLP---EVATYIARMKKTSLQLTQSVSQISINSSASLSDD 268
Query: 474 HKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSD-SFCYTACPLMIGDRQCNKKVTQSGNR 532
++ E + S + +V A I I+++ + + +C QC VT
Sbjct: 269 LLNTKRMTIESMIESTQVCQGSVLATICEIETEVDWYFRSCT------QCATLVTVDNGM 322
Query: 533 WQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL 582
+C +C + R+ L + D TG T F + +G ++L
Sbjct: 323 LRCRKC-KTCKSAVPRFKLHVIVMDDTGSTTFVLFDRQVTQFIGRNVQDL 371
>gi|335440024|ref|ZP_08561748.1| replication factor A [Halorhabdus tiamatea SARL4B]
gi|334889192|gb|EGM27482.1| replication factor A [Halorhabdus tiamatea SARL4B]
Length = 492
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 75/164 (45%), Gaps = 21/164 (12%)
Query: 233 LRRYNNARG-DGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQ 291
+R ++ G +G+V + + D G +RVT ++ DR EI + G + G ++ +
Sbjct: 187 VRTFDRDDGSEGRVANLSIGDE-TGRVRVTLWDERADRVEEI-DAGATVEVVDGYVRERE 244
Query: 292 KNFN-HLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFR-HISEIESAENNSIVDVIGIV 349
+ H+ E I D + ++ + I+ E + VD+ G+V
Sbjct: 245 GDLEVHVGEEGAI---------------DELEDGDVAYAPETTPIDDVELDETVDIGGVV 289
Query: 350 ISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKE 393
S +P+ R +G E Q + + ++D +G + + LWG+ +++
Sbjct: 290 RSTDPTRTFDRDDGSEGQVKNIRIQDDTG-DIRVALWGEKADRD 332
>gi|168040971|ref|XP_001772966.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675699|gb|EDQ62191.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 185
Score = 42.4 bits (98), Expect = 0.74, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 127 PQPVRVNNYSAPNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
P+P + PN+G N+G + N G PN+G APNAG
Sbjct: 21 PKPDVLGALDTPNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAG 67
Score = 40.8 bits (94), Expect = 2.2, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
APN+G N+G + N G PN+G APNAG
Sbjct: 39 APNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAG 75
Score = 40.8 bits (94), Expect = 2.2, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
APN+G N+G + N G PN+G APNAG
Sbjct: 47 APNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAG 83
Score = 40.8 bits (94), Expect = 2.2, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
APN+G N+G + N G PN+G APNAG
Sbjct: 55 APNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAG 91
Score = 40.8 bits (94), Expect = 2.2, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
APN+G N+G + N G PN+G APNAG
Sbjct: 63 APNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAG 99
Score = 40.8 bits (94), Expect = 2.2, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
APN+G N+G + N G PN+G APNAG
Sbjct: 71 APNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAG 107
Score = 40.8 bits (94), Expect = 2.2, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
APN+G N+G + N G PN+G APNAG
Sbjct: 79 APNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAG 115
Score = 40.8 bits (94), Expect = 2.2, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
APN+G N+G + N G PN+G APNAG
Sbjct: 87 APNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAG 123
Score = 40.8 bits (94), Expect = 2.2, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
APN+G N+G + N G PN+G APNAG
Sbjct: 95 APNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAG 131
Score = 40.8 bits (94), Expect = 2.2, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
APN+G N+G + N G PN+G APNAG
Sbjct: 103 APNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAG 139
Score = 40.8 bits (94), Expect = 2.2, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
APN+G N+G + N G PN+G APNAG
Sbjct: 111 APNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAG 147
Score = 40.8 bits (94), Expect = 2.2, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
APN+G N+G + N G PN+G APNAG
Sbjct: 119 APNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAG 155
Score = 40.8 bits (94), Expect = 2.2, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
APN+G N+G + N G PN+G APNAG
Sbjct: 127 APNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAG 163
Score = 40.8 bits (94), Expect = 2.2, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
APN+G N+G + N G PN+G APNAG
Sbjct: 135 APNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAG 171
Score = 40.8 bits (94), Expect = 2.2, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 137 APNSGTFNLQNSGTFNSQNPGSFSTPNSGTFRAPNAG 173
APN+G N+G + N G PN+G APNAG
Sbjct: 143 APNAGVLEAPNAGVLEAPNAGVLEAPNAGVLEAPNAG 179
>gi|115481338|ref|NP_001064262.1| Os10g0186800 [Oryza sativa Japonica Group]
gi|113638871|dbj|BAF26176.1| Os10g0186800 [Oryza sativa Japonica Group]
Length = 343
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 98/244 (40%), Gaps = 32/244 (13%)
Query: 218 QGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVG 277
+G W++ RV K + R+ +R K + LLD G ++ ++ VDR ++ G
Sbjct: 114 RGSWSLGVRVYHKYHVERFAPSR---KRLNLVLLDEQGTKMVAIIYDDQVDRLDPLLREG 170
Query: 278 RVYLISKGSLKPAQKNFNHLKNEWE---IFLEATSTVDLCTEEDD--------SIPKQQF 326
Y +S+ S++PA+ + +F T+ ++ + Q F
Sbjct: 171 SAYYVSRMSIEPARMILYQWLADHAFVCVFTRDTTITEIANMHEKILPLLPPLMPLDQVF 230
Query: 327 SFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELT-- 384
F + N+ VDVIG+VI V+ S+ + R + + D S + V L
Sbjct: 231 EF-------TYHNDIYVDVIGMVIFVS-SIGFVEGYKKRIPYRNILIIDGSFKPVMLVIK 282
Query: 385 --LWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAH 442
+ D K + E P++ + S+ T +++ +P+ A A
Sbjct: 283 DKMLTDHLTKWARCSNEQ------PIIVATMLRAKREEDHSLHTTCFSRVQFDPNVAVAR 336
Query: 443 ELRE 446
ELR+
Sbjct: 337 ELRK 340
>gi|448476279|ref|ZP_21603443.1| replication factor A [Halorubrum aidingense JCM 13560]
gi|445815828|gb|EMA65747.1| replication factor A [Halorubrum aidingense JCM 13560]
Length = 488
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 256 GEIRVTCFNA---VVDRFY--EIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATST 310
G +RVT ++ + D F E++EVG Y+ + + E+ + T
Sbjct: 209 GRVRVTLWDDKADLADEFAAGEVVEVGDGYVRER-------------NGDLELHVGDRGT 255
Query: 311 VDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRI 370
V+ E+ + +P+ ++I E VD+ G +I +P R +G E Q R
Sbjct: 256 VERVDEDVEYVPE-------TTDIAELEIGQTVDIGGGIIETDPKRTFDRDDGSEGQVRN 308
Query: 371 LNLKDTSGRSVELTLWGDFCNKE 393
+ +KD +G + + LWGD + E
Sbjct: 309 VRIKDQTGE-IRVALWGDKADTE 330
>gi|402223359|gb|EJU03423.1| hypothetical protein DACRYDRAFT_105585 [Dacryopinax sp. DJM-731
SS1]
Length = 470
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 123/302 (40%), Gaps = 42/302 (13%)
Query: 256 GEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCT 315
EI + F A R + IE V + A + F + +++++ LE + +
Sbjct: 184 AEILIIAFGAQTFRIHIQIECTHV--------QEAAEGFRQVPHKFQLILEEHAVI--ME 233
Query: 316 EEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISV------NPSVPILRKNGME---T 366
D SIP+ +FR ++ IE I+DV+ +V+ V P+ + G++ T
Sbjct: 234 IHDPSIPRIFLTFRCLNTIERLRVYEIIDVLAVVVCVGRVMKGGPAKTGRVEQGLQVTYT 293
Query: 367 QRRILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGT 426
R + L D S ++ L ++ F N Q + V+ +KS V+ + T
Sbjct: 294 SHRDVWLVDNSKVAIRLCMFDLFQNIFKQAENK--------VIGIKSVVVDMLDRPCLKT 345
Query: 427 IPSTQLFINPDFAEAHE-LREWF-DSGGKNAATVSISREIAAGGAKNEI-----HKTVSQ 479
F+ D +E L EW+ D+ K T++ S A G K++I +
Sbjct: 346 QKGCTQFVFQDGNPGYERLMEWYKDADPKEWRTITGSFS-ADGFPKSDITIPNETIMIKV 404
Query: 480 IKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKV-TQS-GNRWQCDR 537
++ LG + K + + + D + Y C CNKK TQ GN + C
Sbjct: 405 AQDAKLGLTSKKTFKVITKVLVKNYKD-YLYKGCLY----EDCNKKTPTQKIGNVFVCPM 459
Query: 538 CN 539
C+
Sbjct: 460 CD 461
>gi|357444707|ref|XP_003592631.1| Replication factor A protein [Medicago truncatula]
gi|355481679|gb|AES62882.1| Replication factor A protein [Medicago truncatula]
Length = 301
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 25/230 (10%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
L+D GG I T +V +F +++ G Y + + + + ++ ++ + S
Sbjct: 38 LVDEKGGRIHATARKDLVAKFRSMVQEGGTYQLENAIVGFNESPYKVTSHKHKLKMMHNS 97
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIESAENNSI-VDVIGIVISVNPSVPILRKNGMETQR 368
T SIP F F+ +EI S+ + DVIG VI + K+G +++
Sbjct: 98 T--FTKVHSPSIPMNVFKFKPFNEILSSTVEEVSTDVIGHVIE-RGDIRETEKDGRKSRV 154
Query: 369 RILNLKDTSGRSVELTLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSI---G 425
L L+D + +LWG +K V FF + G N F+G + G
Sbjct: 155 IDLTLEDLENNRLHCSLWGKHADK---------IVTFFGAM----GVANAFNGTKLILNG 201
Query: 426 TIPSTQLFINPDFAEAHEL----REWFDSGGKNAAT-VSISREIAAGGAK 470
+P ++ + + +L R +S ++ V+ISR + GG K
Sbjct: 202 DLPDVAAYMTRSASLSDDLLNTNRMTIESMIESTELYVAISRVTSRGGLK 251
>gi|226492828|ref|NP_001143032.1| uncharacterized protein LOC100275500 [Zea mays]
gi|195613244|gb|ACG28452.1| hypothetical protein [Zea mays]
gi|413956495|gb|AFW89144.1| hypothetical protein ZEAMMB73_132037 [Zea mays]
Length = 202
Score = 42.0 bits (97), Expect = 0.97, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
Query: 267 VDRFYEIIEVGRVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQ 324
V F ++ VY + K SL P + NF HL E++L+ + V+ T P
Sbjct: 5 VKHFDNLLHEKHVYKMHNVKFSLHPGEFNFRHLNGSMELYLDQQTIVEPYTVPIQMAPFP 64
Query: 325 QFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELT 384
+ +++++ N ++VD++ IV+ + + + R+I+ + D G +
Sbjct: 65 KQILLNLADVAELPNRTLVDIMAIVVHFD----TIHRTMWGPFRKIV-IMDARGYLHIIK 119
Query: 385 LWGDFCNK 392
+WGD NK
Sbjct: 120 VWGDLLNK 127
>gi|57834063|emb|CAD40309.2| OSJNBb0013O03.4 [Oryza sativa Japonica Group]
Length = 2052
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
L+D G I F + + F ++ G++Y ++ +KP K + + N++ I L +
Sbjct: 1465 LVDETGNSISAQIFPDINEIFEPLLTEGKIYYLAYYRVKPRNKIYRPVANKFAISLTKWT 1524
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIESA--ENNSIVDVIGIVISVNP--SVPILRKNGME 365
V+ E S P ++ + +E S + +S +D IG++ + SV +N +
Sbjct: 1525 KVEEYLEPPSSFPSYVYTLKSFNEFPSLVDKKDSFIDTIGVITEITSITSVRSCTRNA-D 1583
Query: 366 TQRRILNLKDTSGRSV 381
+ +R ++++D + RS+
Sbjct: 1584 SLKRNVHMRD-AKRSI 1598
>gi|448347285|ref|ZP_21536161.1| replication factor A [Natrinema altunense JCM 12890]
gi|445631035|gb|ELY84282.1| replication factor A [Natrinema altunense JCM 12890]
Length = 476
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 20/161 (12%)
Query: 233 LRRYNNARG-DGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQ 291
+R ++ G +GKV + L DS G +RVT ++ D E+ E G + G +K
Sbjct: 186 VRTFDRDDGSEGKVSNLVLGDS-TGRVRVTLWDEQADLATEL-EAGTTVEVIDGYVKDRD 243
Query: 292 KNFN-HLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVI 350
+ H+ N + E +TV+ E + P IE E + +VD+ G+V
Sbjct: 244 GSLELHVGNRGTVE-EIDATVEYVPE---NTP-----------IEDVEIDQVVDLAGVVR 288
Query: 351 SVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCN 391
S +P R +G E Q R + ++D + + + LWGD +
Sbjct: 289 SADPKRTFDRDDGSEGQVRNIRVQDAT-DDIRVALWGDKAD 328
>gi|357467297|ref|XP_003603933.1| hypothetical protein MTR_3g116750 [Medicago truncatula]
gi|355492981|gb|AES74184.1| hypothetical protein MTR_3g116750 [Medicago truncatula]
Length = 203
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVD 268
I+ ++P + W + RV + Y N + FS +L +D G I + ++
Sbjct: 8 ISNVSPRKQSWTLVVRVARAWFGQDYKNKKLP---FSMELVLIDRKGDRIGASIRRTLIY 64
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
+F ++ G V+ IS ++ ++ +NE+++ + V L + +P +SF
Sbjct: 65 KFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLS--KTVLVPTNVYSF 122
Query: 329 RHISEI--ESAENNSIVDVIGIVISV 352
++ ES +NN +VDVIG++I V
Sbjct: 123 TPAPDVFNESYDNNYLVDVIGVMIGV 148
>gi|108862781|gb|ABA99343.2| hypothetical protein LOC_Os12g35400 [Oryza sativa Japonica Group]
Length = 735
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 71/163 (43%), Gaps = 12/163 (7%)
Query: 233 LRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPA 290
L + +A+ + F DLL D+ G I F + +++ ++ G+VY + ++K
Sbjct: 317 LWDFCDAKDESNFFHKDLLLLDAKGNSIHAHIFPPLTEKYKPLLTEGKVYYLHSYTVKYG 376
Query: 291 QKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENN--SIVDVIGI 348
+ + + NE I + ++ C P +S +++ + N VDV+G+
Sbjct: 377 NRLYRPVPNEMMILFTTWTEIEECIGGPAGFPTIVYSLTSYNDVPNLVGNVDRFVDVVGV 436
Query: 349 VISVNPSVPILRKNGMETQRRILNLKDTSGR---SVELTLWGD 388
+ + + P + + R+ +LK S + + LWG+
Sbjct: 437 ITEI--TTPTMLR---PKSRKADSLKKDSSNINSILNVALWGE 474
>gi|357464609|ref|XP_003602586.1| hypothetical protein MTR_3g095950 [Medicago truncatula]
gi|355491634|gb|AES72837.1| hypothetical protein MTR_3g095950 [Medicago truncatula]
Length = 203
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVD 268
I+ ++P + W + RV + Y N + FS +L +D G I + ++
Sbjct: 8 ISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLP---FSMELVLIDRKGDRIGASIRRTLIY 64
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
+F ++ G V+ IS ++ ++ +NE+++ + V L + +P +SF
Sbjct: 65 KFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLS--KTVLVPTNVYSF 122
Query: 329 RHISEI--ESAENNSIVDVIGIVISV 352
++ ES +NN +VDVIG++I V
Sbjct: 123 TPAPDVFNESYDNNYLVDVIGVMIGV 148
>gi|87241182|gb|ABD33040.1| Nucleic acid-binding, OB-fold, subgroup [Medicago truncatula]
Length = 224
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVD 268
I+ ++P + W + RV + Y N + FS +L +D G I + ++
Sbjct: 8 ISNVSPRKQSWTLVVRVVRAWFGQNYKNKKLP---FSMELVLIDRKGDRIGASIRRTLIY 64
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
+F ++ G V+ IS ++ ++ +NE+++ + V L + +P +SF
Sbjct: 65 KFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKL--SKTVLVPTNVYSF 122
Query: 329 RHISEI--ESAENNSIVDVIGIVISV 352
+ ES +NN +VDVIG++I V
Sbjct: 123 TPAPNVFNESYDNNYLVDVIGVMIGV 148
>gi|297722973|ref|NP_001173850.1| Os04g0300175 [Oryza sativa Japonica Group]
gi|255675301|dbj|BAH92578.1| Os04g0300175 [Oryza sativa Japonica Group]
Length = 1718
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
Query: 250 LLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATS 309
L+D G I F + + F ++ G++Y ++ +KP K + + N++ I L +
Sbjct: 1444 LVDETGNSISAQIFPDINEIFEPLLTEGKIYYLAYYRVKPRNKIYRPVANKFAISLTKWT 1503
Query: 310 TVDLCTEEDDSIPKQQFSFRHISEIESA--ENNSIVDVIGIVISVNP--SVPILRKNGME 365
V+ E S P ++ + +E S + +S +D IG++ + SV +N +
Sbjct: 1504 KVEEYLEPPSSFPSYVYTLKSFNEFPSLVDKKDSFIDTIGVITEITSITSVRSCTRNA-D 1562
Query: 366 TQRRILNLKDT 376
+ +R ++++D
Sbjct: 1563 SLKRNVHMRDA 1573
>gi|413915875|gb|AFW55807.1| hypothetical protein ZEAMMB73_980277 [Zea mays]
Length = 343
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Query: 220 RWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVG 277
+++I ARV K + R+ + + F L D +G +I +T V F ++
Sbjct: 181 KYSIVARVEVKFPIEPRFRDRQ------HFVLSDINGAKIEAITYMYETVKHFDNLLHEK 234
Query: 278 RVYLIS--KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
VY + K SL P + NF HL E+ L+ + V+ T P + ++++I
Sbjct: 235 HVYKMHNVKFSLHPGEFNFRHLNGPMELCLDQQTIVEPYTVPIQMAPFPKQILLNLADIA 294
Query: 336 SAENNSIVDVIGIVISVN 353
N ++VD++ +V+ ++
Sbjct: 295 ELLNRTLVDIMAVVVHLD 312
>gi|342210558|ref|ZP_08703319.1| DNA-directed RNA polymerase subunit beta' [Mycoplasma anatis 1340]
gi|341579404|gb|EGS29433.1| DNA-directed RNA polymerase subunit beta' [Mycoplasma anatis 1340]
Length = 1475
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 385 LWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKSIGTIPSTQLFINPDFAEAHEL 444
+W D+ NK + L ++ D+GF S KSG S + T+PST+ I A A++L
Sbjct: 820 VWFDYTNKVAKILDKIKDLGFH--YSTKSGTT--ISMNDVTTVPSTKEKIKDGEAYANKL 875
Query: 445 REWFDSG 451
+E+F+ G
Sbjct: 876 KEYFEKG 882
>gi|313127408|ref|YP_004037678.1| single-stranded DNA-binding protein [Halogeometricum borinquense
DSM 11551]
gi|448288118|ref|ZP_21479319.1| replication factor A [Halogeometricum borinquense DSM 11551]
gi|312293773|gb|ADQ68233.1| single-stranded DNA-binding protein [Halogeometricum borinquense
DSM 11551]
gi|445570157|gb|ELY24723.1| replication factor A [Halogeometricum borinquense DSM 11551]
Length = 486
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 30/178 (16%)
Query: 223 IKARVTAKGDLRRYNNARG-DGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEI-----IEV 276
+K RV + +R ++ G +G+V + L DS G IRVT ++ D E +EV
Sbjct: 176 LKGRVLSTDSVRTFDRDDGSEGRVANLTLGDS-TGRIRVTLWDDKADLAAEFDTDITVEV 234
Query: 277 GRVYLISK-GSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
Y+ + GSL+ H+ N T++ E + +P+ ++I
Sbjct: 235 VDGYVRERDGSLEL------HVGNR--------GTLEEIDENVEYVPE-------TADIA 273
Query: 336 SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKE 393
S E VD+ G VI +P R +G E Q R + +KD +G + + LWG+ + +
Sbjct: 274 SLELGQTVDIAGGVIETDPKRTFDRDDGSEGQVRNIRVKDDTG-DIRVALWGEKADTD 330
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 87/186 (46%), Gaps = 25/186 (13%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRY--NNARGDGKVFSFDLLDSDGGEIRVTCFNAVVD 268
IA + P +V + G+LR + ++ DG+V + ++ D + G IR++ ++ + +
Sbjct: 56 IADIEPGMDDVKFLGKVMSIGELRTFERDDEDEDGRVVNVEVAD-ETGRIRISLWDGMAE 114
Query: 269 RFYEIIEVGRVYLIS---KGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQ 325
E +EVG+V I+ K + + N ++ +A + +D+ T+ DS +
Sbjct: 115 EATENLEVGQVLRIAGRPKDGYNGVEVSVNKVEP------DADAEIDVQTQ--DSYRVED 166
Query: 326 FSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTL 385
S S V++ G V+S + R +G E + L L D++GR + +TL
Sbjct: 167 LSL----------GLSDVNLKGRVLSTDSVRTFDRDDGSEGRVANLTLGDSTGR-IRVTL 215
Query: 386 WGDFCN 391
W D +
Sbjct: 216 WDDKAD 221
>gi|357509383|ref|XP_003624980.1| hypothetical protein MTR_7g089660 [Medicago truncatula]
gi|355499995|gb|AES81198.1| hypothetical protein MTR_7g089660 [Medicago truncatula]
Length = 236
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 211 IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDL--LDSDGGEIRVTCFNAVVD 268
I+ ++P + W + RV + Y N + FS +L +D G I + ++
Sbjct: 8 ISNVSPRKQSWTLVVRVVRAWFGQNYKNKKLP---FSMELVLIDRKGDRIGASIRRTLIY 64
Query: 269 RFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSF 328
+F ++ G V+ IS ++ ++ +NE+++ + V L + +P +SF
Sbjct: 65 KFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLS--KTVLVPTNVYSF 122
Query: 329 RHISEI--ESAENNSIVDVIGIVISV 352
+ ES +NN +VDVIG++I V
Sbjct: 123 TPAPNVFNESYDNNYLVDVIGVMIGV 148
>gi|385305379|gb|EIF49360.1| subunit of heterotrimeric replication protein a [Dekkera
bruxellensis AWRI1499]
Length = 90
Score = 41.6 bits (96), Expect = 1.4, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 564 VTAFQESGEEILGCPAKELYMLKYELQDDVRFGEIIRSRV-FNQYLFRLKIKEELYGDEQ 622
+T F + ++G A+EL LK E + D + + FN+Y FR++ + + Y
Sbjct: 1 MTLFDDQARVLVGLSAEELLKLKEESEVDNSLKNYVNEHIAFNEYSFRVRARLDSYNGID 60
Query: 623 RVKITVIRADQVNYSSESRYLLDLISK 649
R + + V+YS+E+ L+D K
Sbjct: 61 RARFNAVGLAPVDYSTEADALVDEFDK 87
>gi|391331558|ref|XP_003740211.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 173
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 273 IIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHIS 332
+I VG+ Y I+ + K N + E E L+ T L + +PK Q +
Sbjct: 1 MITVGQCYKIN--AYKAEAVNPQYRATEHECKLQLTKLSKLVPIAGNDLPKTQAQTTVLI 58
Query: 333 EIESAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNK 392
E+ S N+ VD++ +V V ++G+ +++ + + D S + V L LW +F K
Sbjct: 59 ELLSKPVNTTVDILVVVFDVRLPQTFNSRDGINREKQTVTVLDDSMKMVNLGLWSEFVGK 118
>gi|414888071|tpg|DAA64085.1| TPA: hypothetical protein ZEAMMB73_996720 [Zea mays]
Length = 191
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/177 (18%), Positives = 80/177 (45%), Gaps = 7/177 (3%)
Query: 210 PIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLL--DSDGGEIRVTCFNAVV 267
P++AL ++ +V K + R A +G + D++ D G I + +
Sbjct: 5 PLSALTLQDRNAEVQIQVHRKWEFR---GAVDNGPILHIDMILTDCTGNAIHCQIPSFLA 61
Query: 268 DRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFS 327
+ +VG++Y +++ S+ A+ + + + ++++ +T++LC P +
Sbjct: 62 ATRGDEFQVGKIYKMTRFSVARAKSTYKPVDGDLMLYVKPYTTLELCHTSPSGFPLYVYH 121
Query: 328 FRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVE 382
+I+ +N+ DV+GI+ ++ P+ + + R + +K+ G +V+
Sbjct: 122 LTSYDKIDPDGSNARNFHDVLGIITEISAIKPVGNAHIPSSYNRHVLIKNLRGSTVK 178
>gi|391336060|ref|XP_003742401.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Metaseiulus occidentalis]
Length = 271
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 21/84 (25%)
Query: 208 IIPIAALNPYQGRWAIKARVTAKGDLRRYN------------------NARGDGKVFSFD 249
I PI ALNP+Q R I+ RVT+KGD++ + N + DGK F+
Sbjct: 149 ITPIIALNPFQSRCTIRGRVTSKGDIKTWEKIIDVCGILKGVGDIQTINRKSDGKPFTKR 208
Query: 250 ---LLDSDGGEIRVTCFNAVVDRF 270
++D+ + +T +N + +
Sbjct: 209 EAFIVDTSNKVVSLTLWNDAISKI 232
>gi|357495843|ref|XP_003618210.1| hypothetical protein MTR_6g005830 [Medicago truncatula]
gi|355493225|gb|AES74428.1| hypothetical protein MTR_6g005830 [Medicago truncatula]
Length = 147
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 3 VNLTPNSISLI-----NGGDVNSKP--LVQVMDIKLIGSTQ---ERYRFLISDSVSTQHA 52
VNLT N+I I G KP L+Q++ I T+ + L+ D + +A
Sbjct: 23 VNLTSNAIHDILFVHKEGTLKGEKPYMLMQILHIVNFPITEGLCNKPHLLLWDGQNAHYA 82
Query: 53 MLATQLNDRVKTGQVKKGSVVQLIDYICSTVQN-RKIIVVLNMETIILDCEPIGNP 107
+L+ L+ + GS+V+L+ Y C T+ + KIIVVL M + D +G+P
Sbjct: 83 LLSVSLSRTYLREGYRVGSIVRLMQYCCRTLDSGDKIIVVLKMNMMKADAMVVGDP 138
>gi|9279564|dbj|BAB01022.1| replication protein A1-like [Arabidopsis thaliana]
Length = 452
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 116/297 (39%), Gaps = 32/297 (10%)
Query: 362 NGMETQRRILNLKDTSG-----RSVEL--TLWGDFCNKEGQKLQEMVDVGFFPVLSVKSG 414
N Q RI +LK G R L TLWG + Q QE D G L ++
Sbjct: 85 NPTSGQYRISDLKYKIGFVFKPRDTRLACTLWGKYAEIVDQACQESTD-GIVVCL-IRFA 142
Query: 415 KVNDFSG-KSIG-TIPSTQLFINPDFAEAHELREWFDSGGKN-AATVSISREIAAGGAKN 471
K+N ++ +S+ + +Q+F++ AE ++ + G ++ S + + A +
Sbjct: 143 KINLYNDTRSVSNSFDVSQVFVDHTLAELGLFKQSIPTDGLTLGSSGSFHKRLYAPRTGD 202
Query: 472 EIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGN 531
+ Q E L S+ TV ++ I +D Y C R NKKV +
Sbjct: 203 DDGDYPRQTIKEVLTFSDVGKCKTV-CTVSAIDTDWPWYYFCC-----RAHNKKVVKEEA 256
Query: 532 ------------RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPA 579
R+ C+ CN ++ L I DQTG F +EILG A
Sbjct: 257 IKFEDVKLPQKPRFWCEICNGFAKSVVPKFWLHLHIMDQTGEAKCMLFDSHAKEILGITA 316
Query: 580 KELYMLKY-ELQDDVRFGEIIRSRVFNQYLFRLKI-KEELYGDEQRVKITVIRADQV 634
+L + E++D ++I + F L + +E ++G + + D +
Sbjct: 317 HDLLAGSFDEIEDPTVLPDVINCLKGKTFQFLLCVQRENIFGGYDSFTVARVYTDNI 373
>gi|301625871|ref|XP_002942126.1| PREDICTED: hypothetical protein LOC100498385 [Xenopus (Silurana)
tropicalis]
Length = 1047
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 17/131 (12%)
Query: 496 VRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQSGNRWQCDRCNQEIDECDYRYLLQAQI 555
+RA + + S Y AC + C ++ ++ NR++C RC + E RY L ++
Sbjct: 213 LRASVLSVLGSSCTYPAC------QHCFTRLIRAANRFECPRCGSQSKEAKQRYKLCLKV 266
Query: 556 QDQTGLTWVTAFQESGEEILGCPAKELY-MLKYELQDDVRFGEIIRSRVFNQ-------- 606
+ + L +T F ++I G A L L+ +Q + NQ
Sbjct: 267 AEWSQLYIITVFGSCLDKIFGTSASALQRQLQCSVQTWSNLASDRAQELLNQAVEQCFVG 326
Query: 607 --YLFRLKIKE 615
+LF +KI E
Sbjct: 327 RNFLFGVKIPE 337
>gi|115437564|ref|NP_001043325.1| Os01g0556600 [Oryza sativa Japonica Group]
gi|113532856|dbj|BAF05239.1| Os01g0556600 [Oryza sativa Japonica Group]
Length = 1932
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/151 (18%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
Query: 241 GDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNE 300
GD + L+ G I + +F +I G+VYL++ +KP K++ + N+
Sbjct: 1204 GDLRHIGLVLVGEKGYAIAAMIYPPWGKKFKPLISEGKVYLLTYYRVKPCTKHYRPVDNK 1263
Query: 301 WEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESA--ENNSIVDVIGIVISVNPSVPI 358
I + ++ + ++ E+ S +S DVIG++ ++ +
Sbjct: 1264 MMINFTRWTGIEEYVDVQAGFGHYAYTLTPYQELRSRVDRKDSFTDVIGVITDISSVTTV 1323
Query: 359 -LRKNGMETQRRILNLKDTSGRSVELTLWGD 388
R ++ +R + +++ + + LWG+
Sbjct: 1324 RTRVRDSDSLKRNVYMRNAENETTNIVLWGE 1354
>gi|402220342|gb|EJU00414.1| nucleic acid-binding protein [Dacryopinax sp. DJM-731 SS1]
Length = 209
Score = 41.2 bits (95), Expect = 1.7, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 8/111 (7%)
Query: 476 TVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNKKVTQS----GN 531
T++++ EGL + + I K++S Y C + CN+KV S
Sbjct: 20 TIAKVYAEGLNAQPRAQTFCIEGTIVIDKANSVTYLGCAM----PHCNRKVHDSDIGTNM 75
Query: 532 RWQCDRCNQEIDECDYRYLLQAQIQDQTGLTWVTAFQESGEEILGCPAKEL 582
+ C C Q +Y + QI W TAF + +LG P +
Sbjct: 76 HYLCPTCKQSFMMPMPKYCICFQIVSGNDHKWATAFNTASTALLGVPVATM 126
>gi|391326905|ref|XP_003737950.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 129
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Query: 340 NSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQKLQE 399
N+ VD++ +V V P ++G+ ++ + + D S + V L LW +F K K E
Sbjct: 9 NTTVDILVVVFDVRPPQTFNCRDGINRVKQTVTVLDDSMKMVNLGLWSEFVGKLDGKEGE 68
Query: 400 MVDVGFFPVLSVKSGKVNDFSG-KSIGTIPSTQLFINPDFAEAHELREWFDSGG 452
V +++ +V D++G + + T +T + A+A LR+WF G
Sbjct: 69 AV--------ILQNLQVRDYNGTRQLSTTTNTIIREAAGDADAERLRQWFKVDG 114
>gi|413949711|gb|AFW82360.1| hypothetical protein ZEAMMB73_114361 [Zea mays]
Length = 405
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 220 RWAIKARVTAKGDLR-RYNNARGDGKVFSFDLLDSDGGEIR-VTCFNAVVDRFYEIIEVG 277
+++I ARV K + RY + + F L D +G +I +T V F ++
Sbjct: 37 KFSIVARVEVKFPIEPRYRDRK------HFILSDINGAKIEAMTSSYETVKHFNNLLHEK 90
Query: 278 RVYLISK--GSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIE 335
V+ + S+ F H+ E++L + V+ T P + F +++I
Sbjct: 91 HVFKMHNVDFSISMGAHQFRHISGPMELYLTRQTVVEPYTVPFQMPPFPKHIFLSLADIA 150
Query: 336 SAENNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGDFCNKEGQ 395
N ++VD++ IV+ ++ I+ + R+I+ + D + +WGD NK
Sbjct: 151 ELPNRTLVDIMAIVVHLD----IIHRTMWGPFRKIV-VMDARWSLHAIKVWGDLLNKNAL 205
Query: 396 K 396
+
Sbjct: 206 R 206
>gi|413937358|gb|AFW71909.1| hypothetical protein ZEAMMB73_180301 [Zea mays]
Length = 848
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 62/150 (41%), Gaps = 8/150 (5%)
Query: 250 LLDSDGGEIRVTCFN-AVVDRFYEIIEVGRVYLISKG--SLKPAQKNFNHLKNEWEIFLE 306
L D +G +I +V F ++ VY + L P NF HL E++
Sbjct: 35 LSDINGAKIEAIANRYEIVKYFNSLLHEKHVYKMHNVWFGLNPGAFNFRHLNGTMELYFT 94
Query: 307 ATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGIVISVNPSVPILRKNGMET 366
+ V+ P + F ++ +I N ++VD++ IV+ ++ + + T
Sbjct: 95 HQTIVEPYAVPVQMPPFPKHIFLNLDDIAELPNRTLVDIMAIVVHLD----TIHRTMWGT 150
Query: 367 QRRILNLKDTSGRSVELTLWGDFCNKEGQK 396
R+I+ + D + +WGD NK +
Sbjct: 151 FRKIV-IMDARWSLHTIKVWGDLLNKNALR 179
>gi|357487037|ref|XP_003613806.1| hypothetical protein MTR_5g041170 [Medicago truncatula]
gi|355515141|gb|AES96764.1| hypothetical protein MTR_5g041170 [Medicago truncatula]
Length = 445
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 326 FSFRHISEIESAE--NNSIVDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVEL 383
F+ ++EI + + + +V VIG V + ++ G + Q L +KD S S+
Sbjct: 19 MKFKPLAEIVAGKWRADLLVHVIGYVHEIG-YCQVMAGTGKKLQVNFL-MKDLSDISLNC 76
Query: 384 TLWGDFCNKEGQKLQEMVDVGFFPVLSVKSGKVND---FSGKSIGTIPSTQLFINPDFAE 440
TLW D+ K + E + G V+ +K GK+N+ + T +T+L IN D AE
Sbjct: 77 TLWEDYAAKFIKFNNENKETGPIIVM-LKYGKINEEGKYPLSVTNTYSATKLLINEDIAE 135
Query: 441 AHELRE 446
RE
Sbjct: 136 IKRFRE 141
>gi|357506747|ref|XP_003623662.1| hypothetical protein MTR_7g074180 [Medicago truncatula]
gi|355498677|gb|AES79880.1| hypothetical protein MTR_7g074180 [Medicago truncatula]
Length = 326
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 5/188 (2%)
Query: 206 ARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNA 265
A+ PI+A++ + + RV A L R N + L+D GG I T
Sbjct: 3 AKYTPISAISGGRKNLKMCVRV-AHIWLIRENKVPTSIIFMNMLLVDEKGGRIHATARKD 61
Query: 266 VVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQ 325
+V +F +++ G Y + + + ++ N+ ++ + ST +IP
Sbjct: 62 LVAKFRCMVQEGGTYQLENAIVGFNESHYKATSNKHKLSMMHNST--FTKVHSPAIPMNV 119
Query: 326 FSFRHISEIESAENNSI-VDVIGIVISVNPSVPILRKNGMETQRRILNLKDTSGRSVELT 384
F F+ +EI S+ + VIG VI + K+G +++ L L+D + +
Sbjct: 120 FEFKPFNEILSSTVEEVSTAVIGHVIE-RGDIRETEKDGRKSRVIDLTLEDLENNRLHCS 178
Query: 385 LWGDFCNK 392
LWG+ +K
Sbjct: 179 LWGEHADK 186
>gi|413943269|gb|AFW75918.1| hypothetical protein ZEAMMB73_045866 [Zea mays]
Length = 514
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 60/315 (19%), Positives = 119/315 (37%), Gaps = 47/315 (14%)
Query: 255 GGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLC 314
G I A+VD +I++ +VY + + + P++ + + N I + +
Sbjct: 2 GTSIHAEIQAALVDDKGSLIQIDKVYELKRFRVAPSRNYYKPVDNSMMIQFTLYTQAKVV 61
Query: 315 TEEDDSIPKQQFSFRHISEIESAENNS--IVDVIGIVISVNPSVPILRKNGMETQRRILN 372
+ + P+ + I + +N ++DV+GI+ + S+ + N R I
Sbjct: 62 EDPPPTFPRYAYKLTSFENIGNNVDNKTYLIDVLGILTEIG-SLYHVGYNNSNIIRDIF- 119
Query: 373 LKDTSGRSVELTLWG---------DFCNKEGQKLQEMVDVGFFPVLSVKSGKVNDFSGKS 423
LKD + S ++TLWG + C++ K ++ VG F G++
Sbjct: 120 LKDINNTSTKVTLWGHQASSFSVDNICDENDNKPIVVLFVGCL---------AKRFKGEA 170
Query: 424 -IGTIPSTQLFINPDFAEAHELREWFDSGG---KN---AATV------------SISREI 464
+ + + NPD EA F + KN A T+ + +E+
Sbjct: 171 YLSATTACTWYFNPDIPEAQVYYNNFHTVAPRNKNYWYAKTLLLNTKLQMIRPQATKKEL 230
Query: 465 AAGGAKNEIHKTVSQIKNEGLGRSEKPDWVTVRAFITFIKSDSFCYTACPLMIGDRQCNK 524
A N KT+ ++ + + ++ + + +C +CNK
Sbjct: 231 QASQTLNIEDKTIEELLQLDPDMFPEQGFKCTVIISRLVQDGRWWFPSC------IKCNK 284
Query: 525 KVTQSGNRWQCDRCN 539
+Q+ +QC CN
Sbjct: 285 SSSQTSTGYQCTLCN 299
>gi|448721700|ref|ZP_21704243.1| replication factor A [Halococcus hamelinensis 100A6]
gi|445790772|gb|EMA41422.1| replication factor A [Halococcus hamelinensis 100A6]
Length = 472
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 38/220 (17%)
Query: 189 PPPNFRNH--------GPILKNEAPARIIP----------IAALNPYQGRWAIKARVTAK 230
P P FR G + E A +I +A + P A A+V
Sbjct: 16 PEPEFREAVERKVEEMGGLADEETAAMLIAHELSDDEVEGVADIEPGMEEAAFAAKVLRI 75
Query: 231 GDLRRY--NNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYEIIEVGRVYLISKGSLK 288
GDLR + ++ +G+V + D+ D G IRV ++ + E +E G V I+ +
Sbjct: 76 GDLRTFERDDEDQEGRVVNLDVADE-TGHIRVAFWDDRAEAAVEELEAGDVLKIAG---Q 131
Query: 289 PAQKNFNHLKNEWEIFLEATSTVDLCTEEDDSIPKQQFSFRHISEIESAENNSIVDVIGI 348
P ++ +N L+ A +D+ +E DSI +S + GI
Sbjct: 132 P-REGYNGLEVSASDAQPADIDIDVDLDEADSIGGLSLGQSDVS------------LTGI 178
Query: 349 VISVNPSVPILRKNGMETQRRILNLKDTSGRSVELTLWGD 388
V+ + R +G E + L L D +GR V +TLW D
Sbjct: 179 VLDTDSVRTFDRDDGSEGRVSNLTLGDETGR-VRVTLWDD 217
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,402,627,669
Number of Sequences: 23463169
Number of extensions: 458864784
Number of successful extensions: 1121878
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 465
Number of HSP's that attempted gapping in prelim test: 1117003
Number of HSP's gapped (non-prelim): 1708
length of query: 653
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 504
effective length of database: 8,863,183,186
effective search space: 4467044325744
effective search space used: 4467044325744
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)