Your job contains 1 sequence.
>006268
MELVPFSDDPDKKSSSTTPPWQDMFRSASIRKPSATSNSQAPLPESHAPPPSQANSTAPG
QKTTCSGDPQVRLALYIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGIQQ
ALVAFWSEPLQLGLTETVLAVPVAIFKVFVGTLVDIKEVFFKVFLKKLKNNGPRHSRSGF
SKLVRWLVSFAVFVIAYETIGAVGSLVILALGFLFSTTNVDSTMSAVSSFRSKSFGRTPF
SSYFTRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKDAVISIKSHVEESNYA
ERLGVKKWMEENDVPGMVDRYTTTFYETVSEQVDSLAMQYNMTEFVTGIKHFVIAPPAGS
SEQSKALTSLSPYTQKLMSLRNRVTKREWKQIYTEVDAIFRELVITREDLVQKAKEFAYQ
GINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLITSESG
GVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYM
STTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCEIQEDIPG
YSPYLTGLSIIGGMTLFPSALEGAIMGPLITTVVIALKDLYVEFVLEEPKKED
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006268
(653 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2178378 - symbol:AT5G55960 "AT5G55960" species... 2267 4.4e-235 1
MGI|MGI:2445107 - symbol:Tmem245 "transmembrane protein 2... 265 2.5e-22 2
UNIPROTKB|Q9H330 - symbol:TMEM245 "Transmembrane protein ... 264 4.0e-21 2
RGD|1308958 - symbol:Tmem245 "transmembrane protein 245" ... 263 1.5e-20 2
UNIPROTKB|E1BD52 - symbol:TMEM245 "Transmembrane protein ... 254 1.8e-19 2
WB|WBGene00010810 - symbol:M01F1.4 species:6239 "Caenorha... 223 4.8e-16 2
UNIPROTKB|Q21453 - symbol:M01F1.4 "Protein M01F1.4, isofo... 223 4.8e-16 2
UNIPROTKB|Q4K9H7 - symbol:PFL_4009 "Putative membrane pro... 122 9.1e-07 2
UNIPROTKB|Q48H39 - symbol:PSPPH_3124 "Membrane protein, p... 122 9.2e-07 2
UNIPROTKB|Q74EV5 - symbol:GSU0854 "Membrane protein, UPF0... 129 3.7e-06 2
TIGR_CMR|GSU_0854 - symbol:GSU_0854 "membrane protein" sp... 129 3.7e-06 2
UNIPROTKB|Q87ZP6 - symbol:PSPTO_3378 "Membrane protein, p... 119 5.1e-06 2
UNIPROTKB|Q9KU99 - symbol:VC_0624 "Putative uncharacteriz... 134 1.1e-05 1
TIGR_CMR|VC_0624 - symbol:VC_0624 "lipoprotein, putative"... 134 1.1e-05 1
>TAIR|locus:2178378 [details] [associations]
symbol:AT5G55960 "AT5G55960" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002688 InterPro:IPR002549 PANTHER:PTHR21716
Pfam:PF01594 eggNOG:NOG272528 EMBL:AY059863 EMBL:BT003364
IPI:IPI00543076 RefSeq:NP_568833.1 UniGene:At.26758 PaxDb:Q93XX1
PRIDE:Q93XX1 EnsemblPlants:AT5G55960.1 GeneID:835694
KEGG:ath:AT5G55960 TAIR:At5g55960 InParanoid:Q93XX1 OMA:EDIPGYN
PhylomeDB:Q93XX1 ProtClustDB:CLSN2690027 ArrayExpress:Q93XX1
Genevestigator:Q93XX1 Uniprot:Q93XX1
Length = 648
Score = 2267 (803.1 bits), Expect = 4.4e-235, P = 4.4e-235
Identities = 456/653 (69%), Positives = 522/653 (79%)
Query: 1 MELVPFXXXXXXXXXXXXXXWQDMFRSASIRKPSATSNSQAPLPESHAPPPSQANSTAPG 60
MELVP+ WQ+MFRSAS RKP Q P S + PP + +
Sbjct: 1 MELVPYDSETKSSIPTNLA-WQEMFRSASSRKP------QDPPSSSSSSPPRKPSGDGSS 53
Query: 61 QKTTCSG-DPQVRLALYIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGIQ 119
KT+ S D Q RLA+YIA+AHAGLAF + +LYF+ KLLQ+Y+RPIQWAIL SIPLRGIQ
Sbjct: 54 SKTSLSTVDSQARLAMYIAMAHAGLAFAICVLYFVGKLLQEYLRPIQWAILCSIPLRGIQ 113
Query: 120 QALVAFWSEPLQLGLTETVLAVPVAIFKVFVGTLVDIKEXXXXXXXXXXXNNGPRHSR-S 178
+ LV FWSEPL+LGLTE VLAVPV++F VF+G++VDIK R +
Sbjct: 114 ETLVDFWSEPLKLGLTEVVLAVPVSVFNVFIGSIVDIKNVCFRVFLRRSKPKRTRKKNDT 173
Query: 179 GFSKLVRWLVSFAVFVIAYETIGAVGSLVILALGFLFSTTNVDSTMSAVSSFRSKSFGRT 238
GFSKLV+WLVSF VFVIAYE IG +GSLVIL+LGFLFS+ NVDS++SAVSS RS SF R+
Sbjct: 174 GFSKLVKWLVSFGVFVIAYERIGGIGSLVILSLGFLFSSKNVDSSLSAVSSLRSNSFRRS 233
Query: 239 PFSSYFTRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKDAVISIKSHVEESN 298
F++YFTR I+ RL TIVAIGLIV M+V L G+IFFSYKIGVEGKDAV S+KSHVEESN
Sbjct: 234 HFTAYFTRGIMTRLNTIVAIGLIVLMIVGSLTGVIFFSYKIGVEGKDAVYSLKSHVEESN 293
Query: 299 YAERLGVKKWMEENDVPGMVDRYTTTFYETVSEQVDSLAMQYNMTEFVTGIKHFVIAPPA 358
YAE++G+K+WM+ENDVPGMVD YTT FYETVSEQ+DSLAMQYNMTE VTGIKHFVI P
Sbjct: 294 YAEKIGIKQWMDENDVPGMVDMYTTKFYETVSEQIDSLAMQYNMTELVTGIKHFVIGHPQ 353
Query: 359 GSSEQSKALTSLSPYTQKLMSLRNRVTKREWKQIYTEVDAIFRELVITREDLVQKAKEFA 418
+S S AL + SPYT+KLMSLR RV REW QIY+EVD IFREL+ITREDLV+KAK FA
Sbjct: 354 NTSTPSTALITPSPYTEKLMSLRTRVKNREWSQIYSEVDVIFRELIITREDLVEKAKGFA 413
Query: 419 YQGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLITSE 478
+G++VSQRVF+ SASV+G AK + S G LIISGAAE FNF+SQLMIF+WVLY LITSE
Sbjct: 414 VKGMDVSQRVFSSSASVVGGGAKFVFSIGNLIISGAAEFFNFISQLMIFIWVLYILITSE 473
Query: 479 SGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFL 538
SGGVTEQVM MLPI+ AR RCVEV+D AISGVLLAT EIAFFQGCLTWLLFR + IHFL
Sbjct: 474 SGGVTEQVMNMLPINASARNRCVEVLDLAISGVLLATAEIAFFQGCLTWLLFRLYNIHFL 533
Query: 539 YMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCEIQEDI 598
YMST LAFISAL PIFP+WFATIPAA+QL+LE RYIVA+ LSV HLVL++YG EIQ+DI
Sbjct: 534 YMSTVLAFISALLPIFPYWFATIPAALQLVLEGRYIVAVILSVTHLVLMEYGASEIQDDI 593
Query: 599 PGYSPYLTGLSIIGGMTLFPSALEGAIMGPLITTVVIALKDLYVEFVLEEPKK 651
PG + YLTGLSIIGG+TLFPSALEGAIMGPLITTVVIALKDLY EFVL EPKK
Sbjct: 594 PGSNAYLTGLSIIGGVTLFPSALEGAIMGPLITTVVIALKDLYAEFVLNEPKK 646
>MGI|MGI:2445107 [details] [associations]
symbol:Tmem245 "transmembrane protein 245" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
MGI:MGI:2445107 GO:GO:0016021 EMBL:AL929577 EMBL:BX470220
InterPro:IPR002549 PANTHER:PTHR21716 Pfam:PF01594
GeneTree:ENSGT00390000001667 eggNOG:NOG272528 HOGENOM:HOG000049264
HOVERGEN:HBG080525 IPI:IPI00876161 UniGene:Mm.296632
UniGene:Mm.486370 ProteinModelPortal:B1AZA5 STRING:B1AZA5
PhosphoSite:B1AZA5 PaxDb:B1AZA5 Ensembl:ENSMUST00000068792
OrthoDB:EOG4V6ZG5 Bgee:B1AZA5 Genevestigator:B1AZA5 Uniprot:B1AZA5
Length = 876
Score = 265 (98.3 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 72/220 (32%), Positives = 120/220 (54%)
Query: 428 VFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLITS--ESGGVTEQ 485
V + + S+L ++ +L+ L SG A + NFV L+IFL L+YL++S E +
Sbjct: 623 VMSRNVSLLFTTVTTLLTI--LFYSGTA-LLNFVLSLIIFLTTLFYLLSSSDEYYKPVKW 679
Query: 486 VMGMLPISKPARIRCV--EVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMSTT 543
V+ + P+S+P + + ++ AI GV A++++A F G TWL F I+ +++ +
Sbjct: 680 VISLTPLSQPGPSSNIIGQSVEEAIRGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSA 739
Query: 544 LAFISALFPIFPFWFATIPAAVQL-LLESRYIVAISLSVIHLVLLDYGTCEIQEDIPGYS 602
LA I P ++A +PA + L L + AI L V HL+ + I DI G
Sbjct: 740 LAAILGAVPFLGTYWAAVPAVLDLWLTQGLGCKAILLLVFHLLPTYFVDTAIYSDISGGG 799
Query: 603 -PYLTGLSIIGGMTLFPSALEGAIMGPLITTVVIALKDLY 641
PYLTGL++ GG + LEGAI+GP++ +++ ++Y
Sbjct: 800 HPYLTGLAVAGGA--YYLGLEGAIIGPILLCILVVASNIY 837
Score = 77 (32.2 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 28/111 (25%), Positives = 46/111 (41%)
Query: 39 SQAPLPESHAPPPSQANSTA-PGQ--KTTCSG---DPQVRLALYIALAHAGLAFTLFILY 92
++AP P P S+A T PG+ +T D ++ A Y A +
Sbjct: 8 AEAPSPRGSPRPESRAPRTVGPGETPRTAALALRFDKPIKQAFYNTGAVLFVCLCCGAAV 67
Query: 93 FIFKLLQDYIRPIQWAILLSIPLRGIQQALVAF---WSEPLQLGLTETVLA 140
++ +L+ ++RP+ WA+L L + +L W L T VLA
Sbjct: 68 LVYFILEAFLRPLLWAVLCGTFLHPFKSSLTRLGRLWLRRLHRAHTPIVLA 118
Score = 41 (19.5 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 23/91 (25%), Positives = 38/91 (41%)
Query: 73 LALYIALAHAGLAFTLFILYF----IFKLLQDYIRPIQWAILLSIPLRGIQQALVAFWSE 128
L + + LAHAG + YF I+ L+ Y+ + + S R ++ + W
Sbjct: 165 LGVQVLLAHAGALICRGLDYFSSLWIWTLVVGYVLMVSFKWNASTQ-RYLRAVSIPVWMI 223
Query: 129 PL-QLGLTETVLAVPVAIFKVF---VGTLVD 155
L + +PV + VF VGTL +
Sbjct: 224 LLFHIASLAGSWRIPVFLVIVFLMSVGTLYE 254
>UNIPROTKB|Q9H330 [details] [associations]
symbol:TMEM245 "Transmembrane protein 245" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=NAS]
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] GO:GO:0016021 EMBL:AL354797
EMBL:AL358815 InterPro:IPR002549 PANTHER:PTHR21716 Pfam:PF01594
EMBL:AF153415 EMBL:AK299952 EMBL:AK172815 EMBL:AL669894
EMBL:BC014248 EMBL:AL833960 IPI:IPI00012429 IPI:IPI00607576
IPI:IPI00945163 IPI:IPI01018849 RefSeq:NP_114401.2
UniGene:Hs.308074 UniGene:Hs.621479 IntAct:Q9H330 STRING:Q9H330
PhosphoSite:Q9H330 DMDM:71152403 PaxDb:Q9H330 PRIDE:Q9H330
Ensembl:ENST00000374586 GeneID:23731 KEGG:hsa:23731 UCSC:uc004bdt.4
UCSC:uc022bln.1 CTD:23731 GeneCards:GC09M111778 H-InvDB:HIX0008268
HGNC:HGNC:1363 HPA:HPA023892 neXtProt:NX_Q9H330 PharmGKB:PA25980
eggNOG:NOG272528 HOGENOM:HOG000049264 HOVERGEN:HBG080525
InParanoid:Q9H330 ChiTaRS:TMEM245 GenomeRNAi:23731 NextBio:46637
ArrayExpress:Q9H330 Bgee:Q9H330 CleanEx:HS_C9orf5
Genevestigator:Q9H330 GermOnline:ENSG00000106771 Uniprot:Q9H330
Length = 911
Score = 264 (98.0 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 71/220 (32%), Positives = 120/220 (54%)
Query: 428 VFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLITS--ESGGVTEQ 485
V + + S+L ++ +L+ L SG A + NFV L+IFL L+YL++S E +
Sbjct: 626 VMSRNVSLLFTTVTTLLTI--LFYSGTA-LLNFVLSLIIFLTTLFYLLSSSDEYYKPVKW 682
Query: 486 VMGMLPISKPARIRCV--EVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMSTT 543
V+ + P+S+P + + ++ AI GV A++++A F G TWL F I+ +++ +
Sbjct: 683 VISLTPLSQPGPSSNIIGQSVEEAIRGVFDASLKMAGFYGLYTWLTHTMFGINIVFIPSA 742
Query: 544 LAFISALFPIFPFWFATIPAAVQL-LLESRYIVAISLSVIHLVLLDYGTCEIQEDIPGYS 602
LA I P ++A +PA + L L + AI L + HL+ + I DI G
Sbjct: 743 LAAILGAVPFLGTYWAAVPAVLDLWLTQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG 802
Query: 603 -PYLTGLSIIGGMTLFPSALEGAIMGPLITTVVIALKDLY 641
PYLTGL++ GG + LEGAI+GP++ +++ ++Y
Sbjct: 803 HPYLTGLAVAGGA--YYLGLEGAIIGPILLCILVVASNIY 840
Score = 67 (28.6 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 28/113 (24%), Positives = 42/113 (37%)
Query: 33 PSATSNSQAPLPE-SHAPPPSQANSTAPGQKTTCSG-DPQVRLALYIALAHAGLAFTLFI 90
PS S S P P A PS P D ++ A Y A +
Sbjct: 11 PSLRS-SPGPAPRVPRAVGPSGGGGETPRTAALALRFDKPIKQAFYNTGAVLFVCLCCGA 69
Query: 91 LYFIFKLLQDYIRPIQWAILLSIPLRGIQQALVAF---WSEPLQLGLTETVLA 140
++ +L+ ++RP+ WA+L L + +L W + L T VLA
Sbjct: 70 AVLVYFILEAFLRPLLWAVLCGTFLHPFKSSLTRLGRHWLQRLHRAHTPIVLA 122
>RGD|1308958 [details] [associations]
symbol:Tmem245 "transmembrane protein 245" species:10116 "Rattus
norvegicus" [GO:0016021 "integral to membrane" evidence=IEA]
RGD:1308958 GO:GO:0016021 InterPro:IPR002549 PANTHER:PTHR21716
Pfam:PF01594 GeneTree:ENSGT00390000001667 CTD:23731
EMBL:AABR03042316 EMBL:AABR03042476 EMBL:AABR03046793
EMBL:AABR03041614 IPI:IPI00364862 RefSeq:XP_003749993.1
RefSeq:XP_003754079.1 Ensembl:ENSRNOT00000032299 GeneID:298020
KEGG:rno:298020 UCSC:RGD:1308958 ArrayExpress:D3ZXD8 Uniprot:D3ZXD8
Length = 876
Score = 263 (97.6 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 71/220 (32%), Positives = 120/220 (54%)
Query: 428 VFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLITS--ESGGVTEQ 485
V + + S+L ++ +L+ L SG A + NFV L+IFL L+YL++S E +
Sbjct: 623 VMSRNVSLLFTTVTTLLTI--LFYSGTA-LLNFVLSLIIFLTTLFYLLSSSDEYYKPVKW 679
Query: 486 VMGMLPISKPARIRCV--EVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMSTT 543
V+ + P+S+P + + ++ AI GV A++++A F G TWL F I+ +++ +
Sbjct: 680 VISLTPLSQPGPSSNIIGQSVEEAIRGVFDASLKMAGFYGLYTWLTHTVFGINIVFIPSA 739
Query: 544 LAFISALFPIFPFWFATIPAAVQL-LLESRYIVAISLSVIHLVLLDYGTCEIQEDIPGYS 602
LA I P ++A +PA + L L + A+ L V HL+ + I DI G
Sbjct: 740 LAAILGAVPFLGTYWAAVPAVLDLWLTQGLGCKAVLLLVFHLLPTYFVDTAIYSDISGGG 799
Query: 603 -PYLTGLSIIGGMTLFPSALEGAIMGPLITTVVIALKDLY 641
PYLTGL++ GG + LEGAI+GP++ +++ ++Y
Sbjct: 800 HPYLTGLAVAGGA--YYLGLEGAIIGPILLCILVVASNIY 837
Score = 62 (26.9 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 22/103 (21%), Positives = 38/103 (36%)
Query: 41 APLPESHAPPPSQANSTAPGQKTTCSGDPQVRLALYIALAHAGLAFTLFILYFIFKLLQD 100
+P E P + + T D ++ A Y A + ++ +L+
Sbjct: 16 SPRSEPRVPRTAGPSETPRTAALALRFDKPIKQAFYNTGAVLFVCLCCGAAVLVYFILEA 75
Query: 101 YIRPIQWAILLSIPLRGIQQALVAF---WSEPLQLGLTETVLA 140
++RP+ WA+L L + +L W L T VLA
Sbjct: 76 FLRPLLWAVLCGTFLHPFKSSLTRLGRLWLRRLHRAHTPIVLA 118
Score = 44 (20.5 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 25 FRSASIRKPSATSNSQAPLPESHAPPPSQANSTAPGQKTTCSGDP 69
+ S+S +PS S P + PP A+S++ + + S P
Sbjct: 288 YESSSEDQPS--DPSAEPTDKGEPPPAPSASSSSSSRSSPSSPSP 330
Score = 38 (18.4 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 23/93 (24%), Positives = 38/93 (40%)
Query: 73 LALYIALAHAGLAFTLFILYF----IFKLLQDYIRPI--QWAILLSIPLRGIQQALVAFW 126
L + + LAHAG + YF I+ L+ Y+ + +W LR + + W
Sbjct: 165 LGVQVLLAHAGALICRGLDYFSSLWIWTLVVGYVLMVSFKWNASTQHYLRAVS---IPVW 221
Query: 127 SEPL-QLGLTETVLAVPVAIFKVFV---GTLVD 155
L + +PV + VF+ GTL +
Sbjct: 222 MILLFHIASLAGSWRIPVFLVIVFLMSAGTLYE 254
>UNIPROTKB|E1BD52 [details] [associations]
symbol:TMEM245 "Transmembrane protein 245" species:9913
"Bos taurus" [GO:0016021 "integral to membrane" evidence=IEA]
GO:GO:0016021 InterPro:IPR002549 PANTHER:PTHR21716 Pfam:PF01594
EMBL:DAAA02024465 IPI:IPI00701036 UniGene:Bt.63165
Ensembl:ENSBTAT00000053653 GeneTree:ENSGT00390000001667 OMA:GGETPRT
Uniprot:E1BD52
Length = 868
Score = 254 (94.5 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 73/223 (32%), Positives = 120/223 (53%)
Query: 428 VFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLITS--ESGGVTEQ 485
V + + S+L S+ +L+ L SG A + NFV L+IFL L+YL++S E +
Sbjct: 626 VMSRNVSLLFSTITTLLTI--LFYSGTA-LLNFVLSLIIFLTTLFYLLSSSDEYYKPVKW 682
Query: 486 VMGMLPISKPARIRCV--EVIDNAIS---GVLLATVEIAFFQGCLTWLLFRFFKIHFLYM 540
V+ + P+S+P + + ++ AI GV A++++A F G TWL F I+ +++
Sbjct: 683 VISLTPLSQPGPSSNIIGQSVEEAIRHSRGVFDASLKMAGFYGLYTWLTHTIFGINIVFI 742
Query: 541 STTLAFISALFPIFPFWFATIPAAVQL-LLESRYIVAISLSVIHLVLLDYGTCEIQEDIP 599
+ LA I P ++A +PA + L L + AI L V HL+ + I DI
Sbjct: 743 PSALAAILGAVPFLGTYWAAVPAVLDLWLTQGLGCKAILLLVFHLLPTYFVDTAIYSDIS 802
Query: 600 GYS-PYLTGLSIIGGMTLFPSALEGAIMGPLITTVVIALKDLY 641
G PYLTGL++ GG + LEGAI+GP++ +++ ++Y
Sbjct: 803 GGGHPYLTGLAVAGGA--YYLGLEGAIIGPILLCILVVASNIY 843
Score = 61 (26.5 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 90 ILYFIFKLLQDYIRPIQWAILLSIPLRGIQQALVAF---WSEPLQLGLTETVLA 140
++YFI L+ ++RP+ WA+L L + +L W + L T VLA
Sbjct: 75 LVYFI---LEAFLRPLLWAVLCGTFLHPFKSSLTRLGRHWLQRLHRAHTPIVLA 125
Score = 45 (20.9 bits), Expect = 8.5e-18, Sum P(2) = 8.5e-18
Identities = 24/91 (26%), Positives = 38/91 (41%)
Query: 73 LALYIALAHAGLAFTLFILYF----IFKLLQDYIRPIQWAILLSIPLRGIQQALVAFWSE 128
L + + LAHAG + YF I+ L+ Y+ + + S R ++ + W
Sbjct: 172 LGVQVLLAHAGALICCGLDYFNSLWIWTLVVGYVLAVSFKWNASTE-RYLRAMSIPVWII 230
Query: 129 PL-QLGLTETVLAVPVAIFKVF---VGTLVD 155
L L +PV + VF VGTL +
Sbjct: 231 LLFHLASLAGAWRIPVFLVIVFLMSVGTLYE 261
Score = 42 (19.8 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 32 KPSATSNSQAPLPESHAPPPSQANSTA 58
+P T +S + P S +PPP + S A
Sbjct: 317 EPPPTLSSSSS-PTSPSPPPGRQRSEA 342
>WB|WBGene00010810 [details] [associations]
symbol:M01F1.4 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] EMBL:Z46381
InterPro:IPR002549 PANTHER:PTHR21716 GeneTree:ENSGT00390000001667
eggNOG:NOG272528 PIR:T23656 RefSeq:NP_001022686.1 UniGene:Cel.6419
DIP:DIP-26878N IntAct:Q21453 MINT:MINT-1053626 STRING:Q21453
PaxDb:Q21453 PRIDE:Q21453 EnsemblMetazoa:M01F1.4a GeneID:175457
KEGG:cel:CELE_M01F1.4 UCSC:M01F1.4a CTD:175457 WormBase:M01F1.4a
HOGENOM:HOG000019037 InParanoid:Q21453 OMA:IWIYVIS NextBio:888236
ArrayExpress:Q21453 Uniprot:Q21453
Length = 808
Score = 223 (83.6 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 64/263 (24%), Positives = 133/263 (50%)
Query: 392 IYTEVDAIFRELVITREDLVQKAKEFAYQGINVSQRVFAGSASVLGSSAKLMLSTGYLII 451
++T++ + +L +++L KE + ++Q + A A + + L++S +I+
Sbjct: 529 VWTQLKGV-TDLTALKDELTLIVKENLDTLMGIAQSIGAILAVNVSIFSSLLVSLAGIIL 587
Query: 452 SGAAEVFNFVSQLMIFLWVLYYLIT-SESGGVTEQVMGMLPI------SKPARIRCVEV- 503
S ++ N ++++FL ++YYL++ S + + Q L S + V
Sbjct: 588 SFGMDLLNTFIEMIVFLTMVYYLLSASRTRWLPLQWASDLSAVTTADGSSAGNQHHITVA 647
Query: 504 IDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPA 563
I++AI GV + + ++A F G T+ + F ++ +++ + A + A PI P + I
Sbjct: 648 IEHAIFGVFVLSAKMAVFYGLYTYFVHSLFDLNIVFVPSMAATVFAAIPIMPPYIVAIFG 707
Query: 564 AVQL-LLESRYIVAISLSVIHLVLLDYGTCEIQEDIPGYSPYLTGLSIIGGMTLFPSALE 622
V+L L+ A+ +V + + ++ G PY+TGL+IIGGM + L+
Sbjct: 708 IVELWLVRGEGAAALVFTVASFAPVMFADATFYREVKGSHPYVTGLAIIGGM--YWLGLQ 765
Query: 623 GAIMGPLITTVVIALKDLYVEFV 645
GAI+GP++ + + L ++Y++ V
Sbjct: 766 GAIIGPIVLCLCLVLVNVYLQHV 788
Score = 60 (26.2 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 23/91 (25%), Positives = 42/91 (46%)
Query: 66 SGDPQVRLAL----YIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGIQQA 121
+GD + R AL Y L L +L L ++ ++ ++ P+ WA+L+ L ++
Sbjct: 13 AGDSEQRTALQFAFYNVLLFVLLGVSLCGLAALYNMMYMFLSPMLWAVLVGTVLFPFKKK 72
Query: 122 L---VAFWSEPLQLG---LTETVLAVPVAIF 146
+ V W LQ L ++V+ +P F
Sbjct: 73 VADTVQHWLRNLQKSNQTLAKSVITLPFTGF 103
>UNIPROTKB|Q21453 [details] [associations]
symbol:M01F1.4 "Protein M01F1.4, isoform a" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] EMBL:Z46381 InterPro:IPR002549 PANTHER:PTHR21716
GeneTree:ENSGT00390000001667 eggNOG:NOG272528 PIR:T23656
RefSeq:NP_001022686.1 UniGene:Cel.6419 DIP:DIP-26878N IntAct:Q21453
MINT:MINT-1053626 STRING:Q21453 PaxDb:Q21453 PRIDE:Q21453
EnsemblMetazoa:M01F1.4a GeneID:175457 KEGG:cel:CELE_M01F1.4
UCSC:M01F1.4a CTD:175457 WormBase:M01F1.4a HOGENOM:HOG000019037
InParanoid:Q21453 OMA:IWIYVIS NextBio:888236 ArrayExpress:Q21453
Uniprot:Q21453
Length = 808
Score = 223 (83.6 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 64/263 (24%), Positives = 133/263 (50%)
Query: 392 IYTEVDAIFRELVITREDLVQKAKEFAYQGINVSQRVFAGSASVLGSSAKLMLSTGYLII 451
++T++ + +L +++L KE + ++Q + A A + + L++S +I+
Sbjct: 529 VWTQLKGV-TDLTALKDELTLIVKENLDTLMGIAQSIGAILAVNVSIFSSLLVSLAGIIL 587
Query: 452 SGAAEVFNFVSQLMIFLWVLYYLIT-SESGGVTEQVMGMLPI------SKPARIRCVEV- 503
S ++ N ++++FL ++YYL++ S + + Q L S + V
Sbjct: 588 SFGMDLLNTFIEMIVFLTMVYYLLSASRTRWLPLQWASDLSAVTTADGSSAGNQHHITVA 647
Query: 504 IDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPA 563
I++AI GV + + ++A F G T+ + F ++ +++ + A + A PI P + I
Sbjct: 648 IEHAIFGVFVLSAKMAVFYGLYTYFVHSLFDLNIVFVPSMAATVFAAIPIMPPYIVAIFG 707
Query: 564 AVQL-LLESRYIVAISLSVIHLVLLDYGTCEIQEDIPGYSPYLTGLSIIGGMTLFPSALE 622
V+L L+ A+ +V + + ++ G PY+TGL+IIGGM + L+
Sbjct: 708 IVELWLVRGEGAAALVFTVASFAPVMFADATFYREVKGSHPYVTGLAIIGGM--YWLGLQ 765
Query: 623 GAIMGPLITTVVIALKDLYVEFV 645
GAI+GP++ + + L ++Y++ V
Sbjct: 766 GAIIGPIVLCLCLVLVNVYLQHV 788
Score = 60 (26.2 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 23/91 (25%), Positives = 42/91 (46%)
Query: 66 SGDPQVRLAL----YIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGIQQA 121
+GD + R AL Y L L +L L ++ ++ ++ P+ WA+L+ L ++
Sbjct: 13 AGDSEQRTALQFAFYNVLLFVLLGVSLCGLAALYNMMYMFLSPMLWAVLVGTVLFPFKKK 72
Query: 122 L---VAFWSEPLQLG---LTETVLAVPVAIF 146
+ V W LQ L ++V+ +P F
Sbjct: 73 VADTVQHWLRNLQKSNQTLAKSVITLPFTGF 103
>UNIPROTKB|Q4K9H7 [details] [associations]
symbol:PFL_4009 "Putative membrane protein" species:220664
"Pseudomonas protegens Pf-5" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000076 GenomeReviews:CP000076_GR eggNOG:COG0628
InterPro:IPR002549 PANTHER:PTHR21716 Pfam:PF01594
HOGENOM:HOG000152546 ProtClustDB:CLSK2519799 RefSeq:YP_261106.1
STRING:Q4K9H7 DNASU:3477764 GeneID:3477764 KEGG:pfl:PFL_4009
PATRIC:19877411 OMA:QEIAYVY BioCyc:PFLU220664:GIX8-4043-MONOMER
Uniprot:Q4K9H7
Length = 353
Score = 122 (48.0 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 44/191 (23%), Positives = 85/191 (44%)
Query: 458 FNFVSQLMIFLWVLYYLITSESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVE 517
F FV I L++L++ + + + ++ +P+++ + R + + + V
Sbjct: 159 FEFVVSFFIMLYLLFFFLR-DGPELVRKIRTAVPLAEYQKRRLQLKFNRVVRATVKGNVL 217
Query: 518 IAFFQGCLTWLLFRFFKI-HFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVA 576
+A QG L L+F F I L + +AF+S L P P A L+
Sbjct: 218 VAVTQGALGGLIFWFLDIPSALLWAVLMAFLS-LLPAVGAGIVWGPVAAYFLISGAIWQG 276
Query: 577 ISLSVIHLVLLDYGTCEIQEDIPGYS---P-YLTGLSIIGGMTLFPSALEGAIMGPLITT 632
+ L + + ++ ++ + G P YL +S +GG+ +F L G ++GPLI
Sbjct: 277 VVLGLFGVFVIGLVDNLLRPILVGKDTKMPDYLILISTLGGLAIF--GLNGFVIGPLIAA 334
Query: 633 VVIALKDLYVE 643
+ ++ L+VE
Sbjct: 335 LFMSSWALFVE 345
Score = 66 (28.3 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 84 LAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGIQQALVA-F-WSEPLQLGLTETVLAV 141
L L L FI+ LL Y + WA++L I +Q+ L A F W L L ++ +
Sbjct: 13 LLLALVTLAFIWILLPFY-GALFWAVILGIVFAPLQRRLQARFGWQRNLT-SLCTLLICL 70
Query: 142 PVAIFKVFVGTLVDIKE 158
+AI V + +++ ++E
Sbjct: 71 VIAILPVIITSVLLVQE 87
>UNIPROTKB|Q48H39 [details] [associations]
symbol:PSPPH_3124 "Membrane protein, putative"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CP000058
GenomeReviews:CP000058_GR eggNOG:COG0628 InterPro:IPR002549
PANTHER:PTHR21716 Pfam:PF01594 OMA:PWMLELL RefSeq:YP_275294.1
STRING:Q48H39 GeneID:3560182 KEGG:psp:PSPPH_3124 PATRIC:19975621
HOGENOM:HOG000152546 ProtClustDB:CLSK2519799 Uniprot:Q48H39
Length = 354
Score = 122 (48.0 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 44/189 (23%), Positives = 82/189 (43%)
Query: 458 FNFVSQLMIFLWVLYYLITSESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVE 517
F+FV + I L++LY+ + + + ++ P+ + + R + + V
Sbjct: 159 FDFVVSVFIMLYLLYFFLR-DGQELVRKIRTAFPLGEQQKRRLQLKFTRVVRATVKGNVV 217
Query: 518 IAFFQGCLTWLLFRFFKI-HFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVA 576
+A QG L +F I L + +AF+S L P P AV LL
Sbjct: 218 VAVTQGALGGFIFWALDIPSALLWAVIMAFLS-LLPAVGAGIVWAPVAVYFLLSGMIWQG 276
Query: 577 ISLSVIHLVLLDYGTCEIQEDIPGYS---P-YLTGLSIIGGMTLFPSALEGAIMGPLITT 632
+ L + + ++ ++ + G P YL +S +GGM++F L G ++GPL+
Sbjct: 277 VVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGGMSVF--GLNGFVIGPLVAA 334
Query: 633 VVIALKDLY 641
+ I+ L+
Sbjct: 335 LFISSWGLF 343
Score = 66 (28.3 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 24/77 (31%), Positives = 39/77 (50%)
Query: 84 LAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGIQQAL-VAF-WSEPLQLGLTETVLAV 141
+ L + FI+ LL Y + WA++L I +Q+ L + F WS L T T+ V
Sbjct: 13 MLLVLVTIAFIWILLPFY-GAVFWAVILGIIFAPVQRRLQIKFNWSRNLTSLCTLTICLV 71
Query: 142 PVAIFKVFVGTLVDIKE 158
+AI V V + + ++E
Sbjct: 72 -IAILPVIVISALLVQE 87
>UNIPROTKB|Q74EV5 [details] [associations]
symbol:GSU0854 "Membrane protein, UPF0118 superfamily"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR002549 PANTHER:PTHR21716 Pfam:PF01594
RefSeq:NP_951911.1 DNASU:2685320 GeneID:2685320 KEGG:gsu:GSU0854
PATRIC:22024469 HOGENOM:HOG000129911 OMA:RIELHPL
ProtClustDB:CLSK763109 BioCyc:GSUL243231:GH27-871-MONOMER
Uniprot:Q74EV5
Length = 363
Score = 129 (50.5 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 41/190 (21%), Positives = 88/190 (46%)
Query: 458 FNFVSQLMIFLWVLYYLITSESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVE 517
F F+ ++++ + L+++ + V +V+ ++P+++ +I + + ++ V+
Sbjct: 161 FLFILKIILMVIALFFIYL-DGERVQRRVLAIIPLTEQHKIELSDTVRRVLTAVMFGVFL 219
Query: 518 IAFFQGCLTWLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAI 577
QG L + I + + + AL P+ +PAA+ LLL + + +
Sbjct: 220 TCLVQGALGGIGLLVAGIPSPVLFGAIMAVCALIPVVGTALIWLPAAIYLLLNGQIVQGV 279
Query: 578 SLSVIHLVLLDYGTCEIQED-IPGYS--PYLT-GLSIIGGMTLFPSALEGAIMGPLITTV 633
L + ++ I+ I G + P L + +GG+ F L GA++GPL+ +
Sbjct: 280 GLMIWGFAVVSSIDNVIRPFFISGKAKLPVLVIAIGGLGGLASF--GLLGAVIGPLVLAL 337
Query: 634 VIALKDLYVE 643
+AL D+Y E
Sbjct: 338 FLALFDMYQE 347
Score = 53 (23.7 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 22/74 (29%), Positives = 36/74 (48%)
Query: 84 LAFTLFILYFIFKLLQDYIRPIQWAILLSI---PLRGIQQALVAFWSEPLQLGL-TETV- 138
LA L +LY ++ ++ ++ P+ WA ++ + PL +A V E L G+ T V
Sbjct: 13 LAVAL-MLYLVYAIVAPFLAPLGWAAVIGVLTFPLYRKLRAGVG-GRELLAAGIMTPAVV 70
Query: 139 --LAVPVAIFKVFV 150
L VPV F+
Sbjct: 71 ITLVVPVVGLTFFI 84
>TIGR_CMR|GSU_0854 [details] [associations]
symbol:GSU_0854 "membrane protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016021 "integral to membrane" evidence=ISS] EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR002549 PANTHER:PTHR21716
Pfam:PF01594 RefSeq:NP_951911.1 DNASU:2685320 GeneID:2685320
KEGG:gsu:GSU0854 PATRIC:22024469 HOGENOM:HOG000129911 OMA:RIELHPL
ProtClustDB:CLSK763109 BioCyc:GSUL243231:GH27-871-MONOMER
Uniprot:Q74EV5
Length = 363
Score = 129 (50.5 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 41/190 (21%), Positives = 88/190 (46%)
Query: 458 FNFVSQLMIFLWVLYYLITSESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVE 517
F F+ ++++ + L+++ + V +V+ ++P+++ +I + + ++ V+
Sbjct: 161 FLFILKIILMVIALFFIYL-DGERVQRRVLAIIPLTEQHKIELSDTVRRVLTAVMFGVFL 219
Query: 518 IAFFQGCLTWLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAI 577
QG L + I + + + AL P+ +PAA+ LLL + + +
Sbjct: 220 TCLVQGALGGIGLLVAGIPSPVLFGAIMAVCALIPVVGTALIWLPAAIYLLLNGQIVQGV 279
Query: 578 SLSVIHLVLLDYGTCEIQED-IPGYS--PYLT-GLSIIGGMTLFPSALEGAIMGPLITTV 633
L + ++ I+ I G + P L + +GG+ F L GA++GPL+ +
Sbjct: 280 GLMIWGFAVVSSIDNVIRPFFISGKAKLPVLVIAIGGLGGLASF--GLLGAVIGPLVLAL 337
Query: 634 VIALKDLYVE 643
+AL D+Y E
Sbjct: 338 FLALFDMYQE 347
Score = 53 (23.7 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 22/74 (29%), Positives = 36/74 (48%)
Query: 84 LAFTLFILYFIFKLLQDYIRPIQWAILLSI---PLRGIQQALVAFWSEPLQLGL-TETV- 138
LA L +LY ++ ++ ++ P+ WA ++ + PL +A V E L G+ T V
Sbjct: 13 LAVAL-MLYLVYAIVAPFLAPLGWAAVIGVLTFPLYRKLRAGVG-GRELLAAGIMTPAVV 70
Query: 139 --LAVPVAIFKVFV 150
L VPV F+
Sbjct: 71 ITLVVPVVGLTFFI 84
>UNIPROTKB|Q87ZP6 [details] [associations]
symbol:PSPTO_3378 "Membrane protein, putative"
species:223283 "Pseudomonas syringae pv. tomato str. DC3000"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:AE016853
GenomeReviews:AE016853_GR eggNOG:COG0628 InterPro:IPR002549
PANTHER:PTHR21716 Pfam:PF01594 OMA:PWMLELL HOGENOM:HOG000152546
ProtClustDB:CLSK2519799 RefSeq:NP_793161.1 DNASU:1185037
GeneID:1185037 KEGG:pst:PSPTO_3378 PATRIC:19998162
BioCyc:PSYR223283:GJIX-3432-MONOMER Uniprot:Q87ZP6
Length = 354
Score = 119 (46.9 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 44/189 (23%), Positives = 82/189 (43%)
Query: 458 FNFVSQLMIFLWVLYYLITSESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVE 517
F+FV + I L++LY+ + + + ++ P+ + + R + + V
Sbjct: 159 FDFVVSVFIMLYLLYFFLR-DGQELVRKIRTAFPLGEQQKRRLQLKFTRVVRATVKGNVV 217
Query: 518 IAFFQGCLTWLLFRFFKI-HFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVA 576
+A QG L +F I L + +AF+S L P P A+ LL
Sbjct: 218 VAVTQGALGGFIFWALDIPSALLWAVIMAFLS-LLPAVGAGIVWAPVALYFLLSGMIWQG 276
Query: 577 ISLSVIHLVLLDYGTCEIQEDIPGYS---P-YLTGLSIIGGMTLFPSALEGAIMGPLITT 632
+ L + + ++ ++ + G P YL +S +GGM++F L G ++GPLI
Sbjct: 277 VVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGGMSVF--GLNGFLIGPLIAA 334
Query: 633 VVIALKDLY 641
+ I+ L+
Sbjct: 335 LFISSWGLF 343
Score = 62 (26.9 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 84 LAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGIQQAL-VAF-WSEPLQLGLTETVLAV 141
L L + FI+ LL Y + WA++L I +Q+ L + F W L T T+ V
Sbjct: 13 LLLVLVSIAFIWILLPFY-GAVFWAVILGIIFAPVQRRLQIKFNWPRNLTSLCTLTICLV 71
Query: 142 PVAIFKVFVGTLVDIKE 158
+AI V V + + ++E
Sbjct: 72 -IAILPVIVISALLVQE 87
>UNIPROTKB|Q9KU99 [details] [associations]
symbol:VC_0624 "Putative uncharacterized protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE003852 GenomeReviews:AE003852_GR
InterPro:IPR002549 PANTHER:PTHR21716 Pfam:PF01594 PIR:C82300
RefSeq:NP_230273.1 DNASU:2615412 GeneID:2615412 KEGG:vch:VC0624
PATRIC:20080357 OMA:GMNTLLI ProtClustDB:CLSK874046 Uniprot:Q9KU99
Length = 361
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 53/226 (23%), Positives = 101/226 (44%)
Query: 424 VSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLITSESGGVT 483
++QR+ A+ GS+ ++S I+ A +FV + L+VL++L+ +
Sbjct: 137 IAQRI-GQFATTFGSN---LVSISAKILGDAT---SFVMHFFLMLFVLFFLLRDHDK-II 188
Query: 484 EQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMSTT 543
+ +LP+S+ R + I+N ++ + A QG + L+ T
Sbjct: 189 SAIRHILPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPGLFWGTM 248
Query: 544 LAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCE------IQED 597
+ F S + P+ IPA + L L AI L++ + ++ G+ + + +
Sbjct: 249 MGFASFI-PVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVV--GSIDNLLRPFLMQG 305
Query: 598 IPGYSPYLTGLSIIGGMTLFPSALEGAIMGPLITTVVIALKDLYVE 643
G + + S++GG+ LF L G I GPLI + + L ++Y E
Sbjct: 306 SAGMNTLMIFFSLLGGIQLF--GLIGLIYGPLIFAITMVLFNIYEE 349
>TIGR_CMR|VC_0624 [details] [associations]
symbol:VC_0624 "lipoprotein, putative" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE003852
GenomeReviews:AE003852_GR InterPro:IPR002549 PANTHER:PTHR21716
Pfam:PF01594 PIR:C82300 RefSeq:NP_230273.1 DNASU:2615412
GeneID:2615412 KEGG:vch:VC0624 PATRIC:20080357 OMA:GMNTLLI
ProtClustDB:CLSK874046 Uniprot:Q9KU99
Length = 361
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 53/226 (23%), Positives = 101/226 (44%)
Query: 424 VSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLITSESGGVT 483
++QR+ A+ GS+ ++S I+ A +FV + L+VL++L+ +
Sbjct: 137 IAQRI-GQFATTFGSN---LVSISAKILGDAT---SFVMHFFLMLFVLFFLLRDHDK-II 188
Query: 484 EQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMSTT 543
+ +LP+S+ R + I+N ++ + A QG + L+ T
Sbjct: 189 SAIRHILPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPGLFWGTM 248
Query: 544 LAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCE------IQED 597
+ F S + P+ IPA + L L AI L++ + ++ G+ + + +
Sbjct: 249 MGFASFI-PVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVV--GSIDNLLRPFLMQG 305
Query: 598 IPGYSPYLTGLSIIGGMTLFPSALEGAIMGPLITTVVIALKDLYVE 643
G + + S++GG+ LF L G I GPLI + + L ++Y E
Sbjct: 306 SAGMNTLMIFFSLLGGIQLF--GLIGLIYGPLIFAITMVLFNIYEE 349
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.138 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 653 628 0.00091 120 3 11 22 0.47 33
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 619 (66 KB)
Total size of DFA: 302 KB (2155 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 59.09u 0.24s 59.33t Elapsed: 00:00:03
Total cpu time: 59.09u 0.24s 59.33t Elapsed: 00:00:03
Start: Tue May 21 09:29:57 2013 End: Tue May 21 09:30:00 2013