BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006272
(652 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q39189|RH7_ARATH DEAD-box ATP-dependent RNA helicase 7 OS=Arabidopsis thaliana
GN=RH7 PE=1 SV=2
Length = 671
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/542 (68%), Positives = 437/542 (80%), Gaps = 44/542 (8%)
Query: 101 ERGESEHPNAVSRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKT 160
E E ++PNAVS+FRIS PLREKLK+ GIE+LFPIQA TFDMVLDG+DLVGRARTGQGKT
Sbjct: 88 EDVEVDNPNAVSKFRISAPLREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKT 147
Query: 161 LAFVLPILESLTNGPTKASKKTGYGRAPSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCC 220
LAFVLPILESL NGP K+ +K GYGR+PSVLVLLPTRELAKQV DFD YGG++GL+SCC
Sbjct: 148 LAFVLPILESLVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCC 207
Query: 221 LYGGAPYHAQEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVE 280
LYGG Y QE KLK+G+D+V+GTPGRIKDHIER N+D S L+FRVLDEADEMLRMGFVE
Sbjct: 208 LYGGDSYPVQEGKLKRGVDIVVGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVE 267
Query: 281 DVELILGKVEDANKVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHI 340
DVELILGKVED+ KVQTLLFSATLPSWVK+IS +FLK D+KTIDLVGN+KMKAS +VRHI
Sbjct: 268 DVELILGKVEDSTKVQTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHI 327
Query: 341 VLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPGARALHGDIQQSQREV 400
+PC+ +A +++IPDII CYSSGG+TIIF ETK S+L+ LL G+RALHG+I QSQREV
Sbjct: 328 AIPCNKAAMARLIPDIISCYSSGGQTIIFAETKVQVSELSGLLDGSRALHGEIPQSQREV 387
Query: 401 TLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRA------- 453
TLAGFR+GKF TLVATNVAARGLDINDVQLIIQCEPPR+VEAYIHRSGRTGRA
Sbjct: 388 TLAGFRNGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGRTGRAGNTGVAV 447
Query: 454 ------------------------------------GVEAAETITQVSDSVIPAFKSAAE 477
G+EAAE + QV DSV+PAF AA+
Sbjct: 448 TLYDSRKSSVSRIEKEAGIKFEHLAAPQPDEIARSGGMEAAEKVKQVCDSVVPAFLEAAK 507
Query: 478 ELLNNSGLSAAELLAKALAKAVGYTEIKSRSLLSSLEDHVTVVLEAGKPIYTPSFAFGVL 537
ELL SGLSA LLAKALAK G+TEIK RSLL+S+E++VT+ LEAGKPIY+PSF +G+L
Sbjct: 508 ELLETSGLSAEVLLAKALAKTAGFTEIKKRSLLTSMENYVTLHLEAGKPIYSPSFVYGLL 567
Query: 538 RRFLPEEKVELVKGMALTADGNGAVFDVPVADLDLFRSGADNAA-NVSLEVLKQLPPLQE 596
RR LP++KVE+++G++LTAD GAVFDV +DLDLF +GA +A ++SLEV+K +P LQE
Sbjct: 568 RRVLPDDKVEMIEGLSLTADKTGAVFDVKQSDLDLFIAGAQKSAGSMSLEVVKVMPKLQE 627
Query: 597 RE 598
RE
Sbjct: 628 RE 629
>sp|Q41382|RH7_SPIOL DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia oleracea GN=RH7
PE=2 SV=1
Length = 685
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/563 (66%), Positives = 440/563 (78%), Gaps = 49/563 (8%)
Query: 85 KKKKAKVEPEAGVEEQERGESEHPNAVSRFRISVPLREKLKSKGIESLFPIQAMTFDMVL 144
K KKAKV EA VE +E PN++S FRIS PL++ L SKGI++LFPIQAMTFD V+
Sbjct: 89 KPKKAKVMEEAVVE------AEDPNSLSNFRISKPLKDVLISKGIKALFPIQAMTFDNVI 142
Query: 145 DGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRAPSVLVLLPTRELAKQVH 204
DG DLVGRARTGQGKTLAFVLPI+ESL NG TK +++G+GR PSVLVLLPTRELA QV
Sbjct: 143 DGCDLVGRARTGQGKTLAFVLPIVESLVNGRTKDLRRSGHGRLPSVLVLLPTRELATQVL 202
Query: 205 EDFDVYGGAVGLTSCCLYGGAPYHAQEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKF 264
DF VYGGAVGLT+C +YGGAP+H+Q L +G+D+V+GTPGR+KD +E+G + L SL F
Sbjct: 203 ADFQVYGGAVGLTACSVYGGAPFHSQISSLTRGVDIVVGTPGRVKDLLEKGVLKLGSLLF 262
Query: 265 RVLDEADEMLRMGFVEDVELILGKVEDANKVQTLLFSATLPSWVKHISTKFLKSDKKTID 324
RVLDEADEML+MGFV+DVELILGKV+ +KVQTLLFSATLPSWVK IST+FLKS KKT+D
Sbjct: 263 RVLDEADEMLKMGFVDDVELILGKVDHVSKVQTLLFSATLPSWVKQISTRFLKSAKKTVD 322
Query: 325 LVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLP 384
LV ++KMKAS +VRHIV+PCS+SAR +IPDIIRCY SGGR+IIFTETKESASQLA LL
Sbjct: 323 LVSDQKMKASISVRHIVIPCSASARPDLIPDIIRCYGSGGRSIIFTETKESASQLAGLLT 382
Query: 385 GARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYI 444
GAR LHGDIQQ+QREVTL GFR+GKFMTLVATNVAARGLDINDVQLIIQCEPPRDVE YI
Sbjct: 383 GARPLHGDIQQTQREVTLKGFRTGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEDYI 442
Query: 445 HRSGRTGRA-------------------------------------------GVEAAETI 461
HRSGRTGRA G+EAA I
Sbjct: 443 HRSGRTGRAGNTGVAVMLYDPKRSSVTKIERESGVKFEHLSAPQPVDVAKAVGIEAAAAI 502
Query: 462 TQVSDSVIPAFKSAAEELLNNSGLSAAELLAKALAKAVGYTEIKSRSLLSSLEDHVTVVL 521
Q+SDSVIPAFK AAEELL+ SGLSA ++L+KALAKA GY++IK RSLL+ +E +VT++L
Sbjct: 503 LQISDSVIPAFKDAAEELLSTSGLSAVDILSKALAKAAGYSDIKERSLLTGMEGYVTLLL 562
Query: 522 EAGKPIYTPSFAFGVLRRFLPEEKVELVKGMALTADGNGAVFDVPVADLDLFRSGADNAA 581
+AG+P Y SFA+ VL+RFLP K + + G+ALTAD +GAVFDVPV DL+ F GA+NAA
Sbjct: 563 DAGRPFYGQSFAYTVLKRFLPATKADSIMGVALTADKSGAVFDVPVDDLETFLVGAENAA 622
Query: 582 NVSLEVLKQLPPLQEREQSRGRF 604
V+L+V+K LPPL+E+ Q RF
Sbjct: 623 GVNLDVVKALPPLEEKVQISRRF 645
>sp|Q650T9|RH7_ORYSJ DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa subsp.
japonica GN=Os09g0520700 PE=2 SV=1
Length = 696
Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/536 (65%), Positives = 422/536 (78%), Gaps = 44/536 (8%)
Query: 108 PNAVSRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPI 167
PNA++ FRIS LREKLKSKGI++LFPIQA TFD+VLDG DLVGRARTGQGKTLAFVLPI
Sbjct: 114 PNALANFRISESLREKLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLPI 173
Query: 168 LESLTNGPTKASKKTGYGRAPSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPY 227
LESL NG KAS++T YGR P+VLVLLPTRELAKQVH DF YG GL++CC+YGG+ Y
Sbjct: 174 LESLVNGTHKASRRTDYGRPPTVLVLLPTRELAKQVHTDFAFYGATFGLSACCVYGGSDY 233
Query: 228 HAQEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILG 287
+QE ++KG+D+V+GTPGR+KD +E+G ++ SLKFRVLDEADEML MGFV+DVELILG
Sbjct: 234 RSQEMAIRKGVDIVVGTPGRVKDFVEKGTLNFRSLKFRVLDEADEMLNMGFVDDVELILG 293
Query: 288 KVEDANKVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSS 347
KVED KVQTLLFSAT+P WVK +S +FLKS KKT+DLVG+EK+KAS +VRH+ LPC+ +
Sbjct: 294 KVEDVTKVQTLLFSATIPEWVKKLSLRFLKSGKKTVDLVGDEKLKASASVRHLALPCNRA 353
Query: 348 ARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPGARALHGDIQQSQREVTLAGFRS 407
AR+QVIPDIIRCYS GGRTIIFTETKESAS L+ L+ G+RALHGD+ Q+QREV LAGFRS
Sbjct: 354 ARAQVIPDIIRCYSRGGRTIIFTETKESASDLSGLIAGSRALHGDVAQAQREVILAGFRS 413
Query: 408 GKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGR--------------- 452
GKF+ LVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGR
Sbjct: 414 GKFLVLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLFEPRY 473
Query: 453 -----------------------------AGVEAAETITQVSDSVIPAFKSAAEELLNNS 483
AG EAAE I+ VSDSVIP F+ AE+LLN+S
Sbjct: 474 KFNVNRIERESGVKFEHISAPQPTDVAQSAGTEAAEAISSVSDSVIPVFREQAEQLLNSS 533
Query: 484 GLSAAELLAKALAKAVGYTEIKSRSLLSSLEDHVTVVLEAGKPIYTPSFAFGVLRRFLPE 543
G+SA +LLAKALAKAVGYT+IK RSLLSS+++H T++L+ G+ +Y F L+RF+PE
Sbjct: 534 GMSAVDLLAKALAKAVGYTDIKKRSLLSSMDNHTTLLLQTGRSVYAAGFVLSTLKRFMPE 593
Query: 544 EKVELVKGMALTADGNGAVFDVPVADLDLFRSGADNAANVSLEVLKQLPPLQEREQ 599
E++ VKG+ +TADG GAVFDVP A+++ + GA NAA V++E +KQLPPLQEREQ
Sbjct: 594 ERLADVKGITITADGTGAVFDVPSAEVEDYIQGAQNAAMVTVEEVKQLPPLQEREQ 649
>sp|Q9NR30|DDX21_HUMAN Nucleolar RNA helicase 2 OS=Homo sapiens GN=DDX21 PE=1 SV=5
Length = 783
Score = 402 bits (1033), Expect = e-111, Method: Compositional matrix adjust.
Identities = 257/618 (41%), Positives = 345/618 (55%), Gaps = 71/618 (11%)
Query: 89 AKVEPEAGVEEQERGESEHPNAVSRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSD 148
+++E E VE++E A S F IS + LK +G+ LFPIQA TF V G D
Sbjct: 173 SEIEQEIPVEQKE-------GAFSNFPISEETIKLLKGRGVTFLFPIQAKTFHHVYSGKD 225
Query: 149 LVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRAPSVLVLLPTRELAKQVHEDF- 207
L+ +ARTG GKT +F +P++E L +G + K+ GRAP VLVL PTRELA QV +DF
Sbjct: 226 LIAQARTGTGKTFSFAIPLIEKL-HGELQDRKR---GRAPQVLVLAPTRELANQVSKDFS 281
Query: 208 DVYGGAVGLTSCCLYGGAPYHAQEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVL 267
D+ L+ C YGG PY Q +++ GID+++GTPGRIKDHI+ G +DL+ LK VL
Sbjct: 282 DI---TKKLSVACFYGGTPYGGQFERMRNGIDILVGTPGRIKDHIQNGKLDLTKLKHVVL 338
Query: 268 DEADEMLRMGFVEDVELILG---KVEDANKVQTLLFSATLPSWVKHISTKFLKSDKKTID 324
DE D+ML MGF + VE IL K + + QTLLFSAT P WV +++ K++KS + +D
Sbjct: 339 DEVDQMLDMGFADQVEEILSVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVD 398
Query: 325 LVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYS-SGGRTIIFTETKESASQLAD-- 381
L+G + K + V H+ + C + R+ VI D+IR YS GRTIIF ETK+ A +L+
Sbjct: 399 LIGKKTQKTAITVEHLAIKCHWTQRAAVIGDVIRVYSGHQGRTIIFCETKKEAQELSQNS 458
Query: 382 -LLPGARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDV 440
+ A++LHGDI Q QRE+TL GFR+G F LVATNVAARGLDI +V L+IQ PP+DV
Sbjct: 459 AIKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDV 518
Query: 441 EAYIHRSGRTGRAG--------------------------------VEAAETITQVS--- 465
E+YIHRSGRTGRAG V +A I + S
Sbjct: 519 ESYIHRSGRTGRAGRTGVCICFYQHKEEYQLVQVEQKAGIKFKRIGVPSATEIIKASSKD 578
Query: 466 -----DSVIPA----FKSAAEELLNNSGLSAAELLAKALAKAVGYTEIKSRSLLSSLEDH 516
DSV P FK +AE+L+ G A E LA ALA G T + RSL++S
Sbjct: 579 AIRLLDSVPPTAISHFKQSAEKLIEEKG--AVEALAAALAHISGATSVDQRSLINSNVGF 636
Query: 517 VTVVLEAGKPIYTPSFAFGVLRRFLPEEKVELVKGMALTADGNGAVFDVPVADLDLFRSG 576
VT++L+ + S+A+ L+ L EE VKGM G FDVP A + +
Sbjct: 637 VTMILQCSIEMPNISYAWKELKEQLGEEIDSKVKGMVFLKGKLGVCFDVPTASVTEIQEK 696
Query: 577 ADNAANVSLEVLKQLPPLQEREQSRGRFGG---GGRGGFGGRGGNRFSGGRGGGFSDRRN 633
++ L V + P L+ + G F G G RG G R GNR G+ G R
Sbjct: 697 WHDSRRWQLSVATEQPELEGPREGYGGFRGQREGSRGFRGQRDGNRRFRGQREGSRGPRG 756
Query: 634 DRFSGGFRGSKGRGGGNR 651
R GG + ++ + G +
Sbjct: 757 QRSGGGNKSNRSQNKGQK 774
>sp|Q9JIK5|DDX21_MOUSE Nucleolar RNA helicase 2 OS=Mus musculus GN=Ddx21 PE=1 SV=3
Length = 851
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 254/593 (42%), Positives = 335/593 (56%), Gaps = 67/593 (11%)
Query: 110 AVSRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILE 169
A S F IS + LK++G+ LFPIQA TF V G DL+ +ARTG GKT +F +P++E
Sbjct: 259 AFSNFPISEETVKLLKARGVNFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIE 318
Query: 170 SLTNGPTKASKKTGYGRAPSVLVLLPTRELAKQVHEDF-DVYGGAVGLTSCCLYGGAPYH 228
L G + + GRAP VLVL PTRELA QV +DF D+ L+ C YGG PY
Sbjct: 319 KLQGGLQERKR----GRAPQVLVLAPTRELANQVSKDFSDI---TKKLSVACFYGGTPYG 371
Query: 229 AQEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILG- 287
Q +++ GID+++GTPGRIKDH++ G +DL+ LK VLDE D+ML MGF + VE IL
Sbjct: 372 GQIERMRSGIDILVGTPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCV 431
Query: 288 --KVEDANKVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCS 345
K + + QTLLFSAT P WV +++ K++KS + +DL+G + KA+ V H+ + C
Sbjct: 432 AYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKAAITVEHLAIKCH 491
Query: 346 SSARSQVIPDIIRCYS-SGGRTIIFTETKESASQLAD---LLPGARALHGDIQQSQREVT 401
+ R+ VI D+IR YS GRTIIF ETK+ A +L+ + A++LHGDI Q QRE+T
Sbjct: 492 WTERAAVIGDVIRVYSGHQGRTIIFCETKKDAQELSQNTCIKQDAQSLHGDIPQKQREIT 551
Query: 402 LAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG------- 454
L GFR+G F LVATNVAARGLDI +V L++Q PP+DVE+YIHRSGRTGRAG
Sbjct: 552 LKGFRNGNFGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAGRTGVCIC 611
Query: 455 -------------------------VEAAETITQVS--------DSVIPA----FKSAAE 477
V +A I + S DSV P FK +AE
Sbjct: 612 FYQNKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAISHFKQSAE 671
Query: 478 ELLNNSGLSAAELLAKALAKAVGYTEIKSRSLLSSLEDHVTVVLEAGKPIYTPSFAFGVL 537
+L+ G A E LA ALA G T + RSL++S VT++L + S+A+ L
Sbjct: 672 KLIEEKG--AVEALAAALAHISGATSVDQRSLINSQAGFVTMILRCSIEMPNISYAWKEL 729
Query: 538 RRFLPEEKVELVKGMALTADGNGAVFDVPVADLDLFRSGADNAANVSLEVLKQLPPLQ-E 596
+ L E VKGM G FDV + + ++ L V + P L+
Sbjct: 730 KEQLGESIDAKVKGMVFLKGKLGVCFDVRTEAVTEIQEKWHDSRRWQLTVATEQPELEGP 789
Query: 597 REQSRGRFG--GGGRGGF-GGRGGNR-FSG-GRGGGFSDRRNDRFSGGFRGSK 644
+ RGR G G RG F G RGG+R F G G+ GG + R R GG RG K
Sbjct: 790 PDGYRGRMGQRDGSRGAFRGQRGGSRNFRGQGQRGGSRNFRGQRPGGGNRGQK 842
>sp|Q3B8Q1|DDX21_RAT Nucleolar RNA helicase 2 OS=Rattus norvegicus GN=Ddx21 PE=2 SV=1
Length = 782
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 256/621 (41%), Positives = 345/621 (55%), Gaps = 80/621 (12%)
Query: 87 KKAKVEPEAGVEEQERGESEHPNAVSRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDG 146
++++ E E VE++E A S F IS + LK++G+ LFPIQA TF V G
Sbjct: 167 EESETEKEIPVEQKE-------GAFSNFPISEETVKLLKARGVNFLFPIQAKTFHHVYSG 219
Query: 147 SDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRAPSVLVLLPTRELAKQVHED 206
DL+ +ARTG GKT +F +P++E L G + + GRAP VLVL PTRELA QV +D
Sbjct: 220 KDLIAQARTGTGKTFSFAIPLIEKLQGGLQERKR----GRAPQVLVLAPTRELANQVSKD 275
Query: 207 F-DVYGGAVGLTSCCLYGGAPYHAQEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFR 265
F D+ L+ C YGG PY Q +++ GID+++GTPGRIKDH++ G +DL+ LK
Sbjct: 276 FSDI---TKKLSVACFYGGTPYGGQIERMRSGIDILVGTPGRIKDHLQNGKLDLTKLKHV 332
Query: 266 VLDEADEMLRMGFVEDVELILG---KVEDANKVQTLLFSATLPSWVKHISTKFLKSDKKT 322
VLDE D+ML MGF + VE IL K + + QTLLFSAT P WV +++ K++KS +
Sbjct: 333 VLDEVDQMLDMGFADQVEEILCVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQ 392
Query: 323 IDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYS-SGGRTIIFTETKESASQLAD 381
+DL+G + KA+ V H+ + C + R+ VI D+IR YS GRTIIF ETK+ A +L+
Sbjct: 393 VDLIGKKTQKAAITVEHLAIKCHWTERAAVIGDVIRVYSGHQGRTIIFCETKKDAQELSQ 452
Query: 382 ---LLPGARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPR 438
+ A++LHGDI Q QRE+TL GFR+G F LVATNVAARGLDI +V L++Q PP+
Sbjct: 453 NTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEVDLVVQSCPPK 512
Query: 439 DVEAYIHRSGRTGRAG--------------------------------VEAAETITQVS- 465
DVE+YIHRSGRTGRAG V +A I + S
Sbjct: 513 DVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASS 572
Query: 466 -------DSVIPA----FKSAAEELLNNSGLSAAELLAKALAKAVGYTEIKSRSLLSSLE 514
DSV P FK +AE+L+ G A E LA ALA G T + RSL++S
Sbjct: 573 KDAIRLLDSVPPTAIGHFKQSAEKLIEEKG--AVEALAAALAHISGATSVDQRSLINSQA 630
Query: 515 DHVTVVLEAGKPIYTPSFAFGVLRRFLPEEKVELVKGMALTADGNGAVFDVPVADLDLFR 574
VT++L + S+A+ L+ L E VKGM G FDV + +
Sbjct: 631 GFVTMILRCSVEMPNISYAWKELKEQLGESIDAKVKGMVFLKGKLGVCFDVRTEAVTEIK 690
Query: 575 SGADNAANVSLEVLKQLPPLQEREQSRGRFGGGGRGGFGGRGGNR--FSGGRGGGFSDRR 632
++ L V + P L+ + G RGG G R G+R F G RGG + R
Sbjct: 691 EKWHDSRRWQLTVATEQPELEGPPE-------GYRGGRGQRDGSRGSFRGQRGGSRNFRG 743
Query: 633 NDRFSG--GFRGSKGRGGGNR 651
+ G FRG + GGGN+
Sbjct: 744 QGQRGGSRNFRGQR-PGGGNK 763
>sp|Q9BQ39|DDX50_HUMAN ATP-dependent RNA helicase DDX50 OS=Homo sapiens GN=DDX50 PE=1 SV=1
Length = 737
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 249/676 (36%), Positives = 347/676 (51%), Gaps = 107/676 (15%)
Query: 18 MNKKMALKDFEETEAALTEKSSDKKKSKKKESSKKRKESEIEEEEERSET--SSELGEPV 75
M K+ D E EA L E S KK+ +K + K R + +E+ E E + +L P
Sbjct: 1 MPGKLLWGDIMELEAPLEESESQKKERQKSDRRKSRHHYDSDEKSETRENGVTDDLDAPK 60
Query: 76 -------------------NLKSEKEKKKKKKAKVEPEAGVEEQER--------GESEHP 108
L E K K + K P ++E E+ S H
Sbjct: 61 AKKSKMKEKLNGDTEEGFNRLSDEFSKSHKSRRKDLPNGDIDEYEKKSKRVSSLDTSTHK 120
Query: 109 N----------------AVSRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGR 152
+ A S F IS + LK +G+ LFPIQ TF V +G DL+ +
Sbjct: 121 SSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQ 180
Query: 153 ARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRAPSVLVLLPTRELAKQVHEDF-DVYG 211
ARTG GKT +F +P++E L K R+P VLVL PTRELA QV +DF D+
Sbjct: 181 ARTGTGKTFSFAIPLIERLQRNQETIKK----SRSPKVLVLAPTRELANQVAKDFKDI-- 234
Query: 212 GAVGLTSCCLYGGAPYHAQEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEAD 271
L+ C YGG Y +Q ++ GID+++GTPGRIKDH++ G +DLS L+ VLDE D
Sbjct: 235 -TRKLSVACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVD 293
Query: 272 EMLRMGFVEDVELILG---KVEDANKVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGN 328
+ML +GF E VE I+ K + + QTLLFSAT P WV ++ K++KS + +DLVG
Sbjct: 294 QMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGK 353
Query: 329 EKMKASTNVRHIVLPCSSSARSQVIPDIIRCYS-SGGRTIIFTETKESASQLA---DLLP 384
KA+T V H+ + C S R VI D+++ YS S GR IIF ETK++ +++A +
Sbjct: 354 MTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQ 413
Query: 385 GARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYI 444
A+ LHGDI QSQRE+TL GFR G F LVATNVAARGLDI +V L+IQ PP+DVE+YI
Sbjct: 414 NAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYI 473
Query: 445 HRSGRTGRAG--------------------------------------------VEAAET 460
HRSGRTGRAG ++A +
Sbjct: 474 HRSGRTGRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRS 533
Query: 461 ITQVSDSVIPAFKSAAEELLNNSGLSAAELLAKALAKAVGYTEIKSRSLLSSLEDHVTVV 520
+ VS + + F+ +A+ L+ G A + LA ALA G + + RSL++S + VT+
Sbjct: 534 LASVSYAAVDFFRPSAQRLIEEKG--AVDALAAALAHISGASSFEPRSLITSDKGFVTMT 591
Query: 521 LEAGKPIYTPSFAFGVLRRFLPEEKVELVKGMALTADGNGAVFDVPVADLDLFRSGADNA 580
LE+ + I S A+ L R L V + M L G FDVP + + ++ ++
Sbjct: 592 LESLEEIQDVSCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFDVPTTESERLQAEWHDS 651
Query: 581 ANVSLEVLKQLPPLQE 596
+ L V +LP ++E
Sbjct: 652 DWI-LSVPAKLPEIEE 666
>sp|Q99MJ9|DDX50_MOUSE ATP-dependent RNA helicase DDX50 OS=Mus musculus GN=Ddx50 PE=2 SV=1
Length = 734
Score = 368 bits (945), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/539 (41%), Positives = 306/539 (56%), Gaps = 62/539 (11%)
Query: 110 AVSRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILE 169
A S F IS + LK +G+ LFPIQ TF V +G DL+ +ARTG GKT +F +P++E
Sbjct: 135 AFSNFSISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIE 194
Query: 170 SLTNGPTKASKKTGYGRAPSVLVLLPTRELAKQVHEDF-DVYGGAVGLTSCCLYGGAPYH 228
L K R+P VLVL PTRELA QV +DF D+ L+ C YGG Y
Sbjct: 195 RLQRNQETIKK----SRSPKVLVLAPTRELANQVAKDFKDI---TRKLSVACFYGGTSYQ 247
Query: 229 AQEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILG- 287
+Q +++ GID+++GTPGRIKDH++ G +DLS L+ VLDE D+ML +GF E VE I+
Sbjct: 248 SQINQIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHE 307
Query: 288 --KVEDANKVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCS 345
K + + QTLLFSAT P WV ++ K++KS + +DLVG KA+T V H+ + C
Sbjct: 308 SYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCH 367
Query: 346 SSARSQVIPDIIRCYS-SGGRTIIFTETKESASQLA---DLLPGARALHGDIQQSQREVT 401
S R VI D+++ YS S GR IIF ETK++ +++A + A+ LHGDI QSQRE+T
Sbjct: 368 WSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREIT 427
Query: 402 LAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG------- 454
L GFR G F LVATNVAARGLDI +V L+IQ PP+DVE+YIHRSGRTGRAG
Sbjct: 428 LKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICVC 487
Query: 455 -------------------------------------VEAAETITQVSDSVIPAFKSAAE 477
++A ++ VS + + F+ +A+
Sbjct: 488 FYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYAAVDFFRPSAQ 547
Query: 478 ELLNNSGLSAAELLAKALAKAVGYTEIKSRSLLSSLEDHVTVVLEAGKPIYTPSFAFGVL 537
L+ G A + LA ALA G + + RSL++S + VT+ LE+ + I S A+ L
Sbjct: 548 RLIEEKG--AVDALAAALAHISGASSFEPRSLITSDKGFVTMTLESPEEIQDVSCAWKEL 605
Query: 538 RRFLPEEKVELVKGMALTADGNGAVFDVPVADLDLFRSGADNAANVSLEVLKQLPPLQE 596
R L V V M L G FDVP ++ + ++ ++ + L V +LP ++E
Sbjct: 606 NRKLSSNAVSHVTRMCLLKGNMGVCFDVPTSESERLQAEWHDSDWI-LSVPAKLPEIEE 663
>sp|Q0DM51|RH3_ORYSJ DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza
sativa subsp. japonica GN=Os03g0827700 PE=2 SV=2
Length = 758
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 210/511 (41%), Positives = 289/511 (56%), Gaps = 65/511 (12%)
Query: 110 AVSRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILE 169
A++R + L L+ +GI LFPIQ LDG DL+ RA+TG GKTLAF +P+++
Sbjct: 105 AIARLGLPEQLVSTLEKRGITHLFPIQRAVLIPALDGRDLIARAKTGTGKTLAFGIPMIK 164
Query: 170 SLTNGPTKASKKTGYGRAPSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHA 229
L S + G R P VLVL PTRELAKQV ++ + A L++ C+YGG Y+
Sbjct: 165 QLMEEDDGRSVRRG--RIPRVLVLAPTRELAKQVEKE--IKESAPKLSTVCVYGGVSYNV 220
Query: 230 QEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKV 289
Q+ L +G+DVV+GTPGRI D I G++ L +K+ VLDEAD+ML +GF EDVE IL ++
Sbjct: 221 QQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETILQQL 280
Query: 290 EDANKVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSAR 349
+ Q++LFSAT+P WVK +S ++L ++ TIDLVG++ K + ++ +P +S+++
Sbjct: 281 --PAERQSMLFSATMPGWVKKLSRRYL-NNPLTIDLVGDQDEKLAEGIKLYAIPLTSTSK 337
Query: 350 SQVIPDIIRCYSSGGRTIIFTETKESASQLADLLP---GARALHGDIQQSQREVTLAGFR 406
V+ D+I Y+ GG+TI+FT+TK A +++ L + ALHGDI Q QRE TL GFR
Sbjct: 338 RTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGFR 397
Query: 407 SGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG------------ 454
GKF LVAT+VAARGLDI +V LII E P D E ++HRSGRTGRAG
Sbjct: 398 QGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTNS 457
Query: 455 ----VEAAE----------------------------TITQVSDSVIPAFKSAAEELLNN 482
V + E T+ V I F AAE L
Sbjct: 458 QRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHTESIQYFIPAAERLQEE 517
Query: 483 SGLSAAELLAKALAKAVGYTE-IKSRSLLSSLEDHVTVVLE----AGKPIYTPSFAFGVL 537
G +A LA ALA G+++ SRSL+S + VT+ L G+ ++P G L
Sbjct: 518 LGPNA---LASALAHLSGFSQPPSSRSLISHEQGWVTLQLTRDPGYGRGFFSPRSVTGFL 574
Query: 538 RRFLPEEKVELVKGMALTADG--NGAVFDVP 566
E+ K + LTAD GAVFD+P
Sbjct: 575 SDVSSAAADEVGK-IFLTADEKVQGAVFDLP 604
>sp|Q9LUW5|RH53_ARATH DEAD-box ATP-dependent RNA helicase 53 OS=Arabidopsis thaliana
GN=RH53 PE=2 SV=1
Length = 616
Score = 316 bits (809), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 167/360 (46%), Positives = 237/360 (65%), Gaps = 12/360 (3%)
Query: 110 AVSRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILE 169
A+S IS + + L SKGIE LFPIQ + ++G D++GRARTG GKTLAF +PI++
Sbjct: 105 AISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIID 164
Query: 170 SLTNGPTKASKKTGYGRAPSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHA 229
+ K + K G GR P LVL PTRELA+QV ++F A L + CLYGG P
Sbjct: 165 KII----KYNAKHGRGRNPLCLVLAPTRELARQVEKEF--RESAPSLDTICLYGGTPIGQ 218
Query: 230 QEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKV 289
Q +L G+DV +GTPGR+ D ++RG ++LS ++F VLDEAD+ML++GF EDVE+IL K+
Sbjct: 219 QMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKL 278
Query: 290 EDANKVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSAR 349
+ K Q+++FSAT+PSW++ ++ K+L ++ T+DLVG+ K + + + S R
Sbjct: 279 PE--KRQSMMFSATMPSWIRSLTKKYL-NNPLTVDLVGDSDQKLADGITTYSIIADSYGR 335
Query: 350 SQVIPDIIRCYSSGGRTIIFTETKESASQLADLLP---GARALHGDIQQSQREVTLAGFR 406
+ +I ++ ++ GG+ I+FT+TK A +L+ L ALHGDI QSQRE TLAGFR
Sbjct: 336 ASIIGPLVTEHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFR 395
Query: 407 SGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGVEAAETITQVSD 466
G F LVAT+VAARGLD+ +V LII E P + E ++HR+GRTGRAG + + + D
Sbjct: 396 DGHFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQD 455
>sp|Q9LUW6|RH9_ARATH DEAD-box ATP-dependent RNA helicase 9 OS=Arabidopsis thaliana
GN=RH9 PE=2 SV=1
Length = 610
Score = 314 bits (804), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 166/360 (46%), Positives = 237/360 (65%), Gaps = 12/360 (3%)
Query: 110 AVSRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILE 169
A++ IS + + LK +GIE LFPIQ + ++G D++GRARTG GKTLAF +PI++
Sbjct: 117 AIADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIID 176
Query: 170 SLTNGPTKASKKTGYGRAPSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHA 229
+ K + K G G+ P LVL PTRELA+QV ++F A L + CLYGG P
Sbjct: 177 KII----KFNAKHGRGKNPQCLVLAPTRELARQVEKEF--RESAPSLDTICLYGGTPIGQ 230
Query: 230 QEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKV 289
Q +L GIDV +GTPGRI D ++RG ++LS ++F VLDEAD+ML++GF EDVE+IL K+
Sbjct: 231 QMRELNYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKL 290
Query: 290 EDANKVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSAR 349
K Q+++FSAT+PSW++ ++ K+L ++ TIDLVG+ K + + + S R
Sbjct: 291 P--AKRQSMMFSATMPSWIRSLTKKYL-NNPLTIDLVGDSDQKLADGITMYSIAADSYGR 347
Query: 350 SQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPGA---RALHGDIQQSQREVTLAGFR 406
+ +I +++ + GG+ I+FT+TK A +LA L + ALHGDI Q+QRE TLAGFR
Sbjct: 348 ASIIGPLVKEHGKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFR 407
Query: 407 SGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGVEAAETITQVSD 466
G F LVAT+VAARGLD+ +V L+I E P + E ++HR+GRTGRAG + + + D
Sbjct: 408 DGNFSILVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQD 467
>sp|Q0D8N0|RH53_ORYSJ DEAD-box ATP-dependent RNA helicase 53 OS=Oryza sativa subsp.
japonica GN=Os07g0143700 PE=2 SV=2
Length = 602
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 162/359 (45%), Positives = 233/359 (64%), Gaps = 13/359 (3%)
Query: 111 VSRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILES 170
V+R IS + E+L ++GI LFPIQ D + G D++GRARTG GKTLAF +PI++
Sbjct: 86 VARLGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDR 145
Query: 171 LTNGPTKASKKTGYGRAPSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHAQ 230
+ + ++K G GR P ++L PTRELA+QV ++F + L S C+YGG P Q
Sbjct: 146 IL----RHNEKNGSGRNPLAIILAPTRELARQVEKEFKE---SAPLDSLCVYGGVPISHQ 198
Query: 231 EFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVE 290
L G+DVV+GTPGRI D + RG ++LS ++F VLDEAD+ML +GF EDVE+I+ +
Sbjct: 199 MRALNYGVDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLP 258
Query: 291 DANKVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARS 350
Q++LFSAT+PSW++ I++K+LK D IDLVG+E K + + +
Sbjct: 259 --QNRQSMLFSATMPSWIRKITSKYLK-DPIIIDLVGDEDQKLPEGISLYSIASEHYGKP 315
Query: 351 QVIPDIIRCYSSGGRTIIFTETKESASQLADLL---PGARALHGDIQQSQREVTLAGFRS 407
++ +I+ +++GG+ I+FT+TK A +LA + +ALHGDI Q+QRE TL+GFR
Sbjct: 316 SILGPLIKEHANGGKCIVFTQTKREADRLAYAMGRSYACQALHGDISQNQRERTLSGFRD 375
Query: 408 GKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGVEAAETITQVSD 466
G+F LVAT+VAARGLDI +V L+I E P E ++HRSGRT RAG + + + +D
Sbjct: 376 GRFNILVATDVAARGLDIPNVDLVIHYELPNTSELFVHRSGRTARAGKKGSAILIYTND 434
>sp|Q8L7S8|RH3_ARATH DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Arabidopsis
thaliana GN=RH3 PE=1 SV=2
Length = 748
Score = 302 bits (774), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 209/556 (37%), Positives = 298/556 (53%), Gaps = 76/556 (13%)
Query: 110 AVSRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILE 169
A+S+ + L E L+ +GI LFPIQ L G D++ RA+TG GKTLAF +PI++
Sbjct: 103 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 162
Query: 170 SLTNGPTKASKKTGYGRAPSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHA 229
LT + GR P LVL PTRELAKQV ++ + A L++ C+YGG Y
Sbjct: 163 RLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKE--IKESAPYLSTVCVYGGVSYTI 220
Query: 230 QEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKV 289
Q+ L +G+DVV+GTPGRI D IE ++ L +++ VLDEAD+ML +GF E VE IL +
Sbjct: 221 QQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENL 280
Query: 290 EDANKVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSAR 349
K Q++LFSAT+P+WVK ++ K+L + IDLVG++ K + ++ + +S+++
Sbjct: 281 --PTKRQSMLFSATMPTWVKKLARKYL-DNPLNIDLVGDQDEKLAEGIKLYAIATTSTSK 337
Query: 350 SQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPGA---RALHGDIQQSQREVTLAGFR 406
++ D+I Y+ GG+TI+FT+TK A +++ L + ALHGDI Q QRE TL FR
Sbjct: 338 RTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFR 397
Query: 407 SGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGVEAAETITQVS- 465
GKF LVAT+VA+RGLDI +V L+I E P D E ++HRSGRTGRAG E + + S
Sbjct: 398 QGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSS 457
Query: 466 --------------------------------DSVIPA-----------FKSAAEELLNN 482
D V+ F + A++L
Sbjct: 458 QKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQKLYEE 517
Query: 483 SGLSAAELLAKALAKAVGYTE-IKSRSLLSSLEDHVTVVLEAGKPIYTPSFAFGVLRR-- 539
G A L+ G+++ SRSLLS + VT+ L I P+ A G L
Sbjct: 518 KGTDALAAALAHLS---GFSQPPSSRSLLSHEKGWVTLQL-----IRDPTNARGFLSARS 569
Query: 540 ---FLPE---EKVELVKGMALTADG--NGAVFDVP--VADLDLFRSGADNAANVSLEVLK 589
FL + + V + L AD GAVFD+P +A L + D SL ++
Sbjct: 570 VTGFLSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAKELLEK---DVPEGNSLSMIT 626
Query: 590 QLPPLQEREQSRGRFG 605
+LPPLQ+ S +G
Sbjct: 627 KLPPLQDDGPSSDNYG 642
>sp|Q0ILZ4|RH9_ORYSJ DEAD-box ATP-dependent RNA helicase 9 OS=Oryza sativa subsp.
japonica GN=Os12g0611200 PE=2 SV=1
Length = 628
Score = 301 bits (770), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/347 (46%), Positives = 229/347 (65%), Gaps = 13/347 (3%)
Query: 111 VSRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILES 170
V++ IS + +L S+GI LFPIQ + + G D+VGRA+TG GKTLAF +PIL++
Sbjct: 100 VAKLGISPKIVSQLASRGITKLFPIQRAVLEPAMQGKDMVGRAKTGTGKTLAFGIPILDA 159
Query: 171 LTNGPTKASKKTGYGRAPSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHAQ 230
+ + ++K G+ P +VL PTRELAKQV +F + + + C+YGG P Q
Sbjct: 160 II----RHNEKNSPGKFPLAIVLAPTRELAKQVEREFS---DSSNVETICVYGGTPISQQ 212
Query: 231 EFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVE 290
+L G+DVVIGTPGR+ D ++RG ++LS ++F VLDEAD+ML +GF EDVE IL +V
Sbjct: 213 IRQLNYGVDVVIGTPGRVIDLLKRGALNLSEVRFVVLDEADQMLSVGFDEDVETILDRVP 272
Query: 291 DANKVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARS 350
K QTL+FSAT+P+W++ ++ K+LK + TIDLVG + K + + + A+
Sbjct: 273 P--KRQTLMFSATMPTWIQRLTQKYLK-NPVTIDLVGEDDQKLAEGISLYSIASEGHAKP 329
Query: 351 QVIPDIIRCYSSGGRTIIFTETKESASQLADLLP---GARALHGDIQQSQREVTLAGFRS 407
V+ ++I+ ++ GG+ I+FT+TK A +L+ + +ALHGDI Q+QRE TL GFR
Sbjct: 330 AVLGELIKEHAKGGKCIVFTQTKRDADRLSYTMGRSFQCQALHGDITQAQRERTLKGFRE 389
Query: 408 GKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG 454
G F L+AT+VAARGLDI +V L+I E P E ++HRSGRTGRAG
Sbjct: 390 GHFNILIATDVAARGLDIPNVDLVIHFELPNSSELFVHRSGRTGRAG 436
>sp|Q9C718|RH20_ARATH DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana
GN=RH20 PE=1 SV=1
Length = 501
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/394 (37%), Positives = 219/394 (55%), Gaps = 22/394 (5%)
Query: 108 PNAVSRFR-ISVP--LREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFV 164
P V FR + P + E++K G PIQ+ + M + G DL+G A TG GKTL+++
Sbjct: 95 PKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYL 154
Query: 165 LPILESLTNGPTKASKKTGYGRAPSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGG 224
LP + + P A +G P VLVL PTRELA Q+ ++ +G + + + C+YGG
Sbjct: 155 LPAIVHVNAQPMLA-----HGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGG 209
Query: 225 APYHAQEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVEL 284
P Q L+KG+++VI TPGR+ D +E N +L + + VLDEAD ML MGF +
Sbjct: 210 VPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRK 269
Query: 285 ILGKVEDANKVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPC 344
I+ + QTL +SAT P V+ +S KFL + K I +G+ +KA+ +R IV
Sbjct: 270 IVSHIRPDR--QTLYWSATWPKEVEQLSKKFLYNPYKVI--IGSSDLKANRAIRQIVDVI 325
Query: 345 SSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLA-----DLLPGARALHGDIQQSQRE 399
S S + + ++ G R ++F +TK+ Q+ D P A ++HGD Q++R+
Sbjct: 326 SESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWP-ALSIHGDKSQAERD 384
Query: 400 VTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGVE-AA 458
L+ FRSGK + AT+VAARGLD+ DV+ +I + P +E Y+HR GRTGRAG + A
Sbjct: 385 WVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTA 444
Query: 459 ETITQVSDSVIPAFKSAAEELLNNSGLSAAELLA 492
T V+++ F +L +G + LA
Sbjct: 445 YTFFTVANA---RFAKELTNILQEAGQKVSPELA 475
>sp|Q75B50|DED1_ASHGO ATP-dependent RNA helicase DED1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DED1
PE=3 SV=2
Length = 623
Score = 235 bits (599), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 143/361 (39%), Positives = 203/361 (56%), Gaps = 19/361 (5%)
Query: 108 PNAVSRFRISVPLREKLKSKGIESLF----PIQAMTFDMVLDGSDLVGRARTGQGKTLAF 163
P+ ++ F S PL E L + F P+Q + +V G DL+ A+TG GKT F
Sbjct: 142 PDPITEF-TSPPLDELLLENIKLARFTKPTPVQKYSVPIVAKGRDLMACAQTGSGKTGGF 200
Query: 164 VLPIL-ESLTNGPTKASKKTGYGR---APSVLVLLPTRELAKQVHEDFDVYGGAVGLTSC 219
+ P+L +S +NGP ++GY P+ +VL PTRELA Q+ ++ + + C
Sbjct: 201 LFPVLSQSFSNGPASTPDESGYYMRKAYPTAVVLAPTRELATQIFDEAKKFTYRSWVKPC 260
Query: 220 CLYGGAPYHAQEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFV 279
+YGGA Q +L++G D+++ TPGR+ D +ERG I L S+K+ VLDEAD ML MGF
Sbjct: 261 VVYGGADIRQQIRELERGCDLIVATPGRLNDLLERGKISLCSVKYLVLDEADRMLDMGFE 320
Query: 280 EDVELIL--GKVEDANKVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNV 337
+ I+ + QTL+FSAT P+ ++H++ FLK I L S N+
Sbjct: 321 PQIRHIVEGCDMPTVENRQTLMFSATFPTDIQHLAADFLKD---YIFLSVGRVGSTSENI 377
Query: 338 RHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLP----GARALHGDI 393
VL + V+ D++ S GG T++F ETK A L D L A A+HGD
Sbjct: 378 TQKVLHVEDIDKRSVLLDLLAA-SDGGLTLVFVETKRMADALTDFLIMQNLSATAIHGDR 436
Query: 394 QQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRA 453
Q++RE LA FR+G+ LVAT VAARGLDI +V +I + P D++ Y+HR GRTGRA
Sbjct: 437 TQAERERALAFFRTGRANVLVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRA 496
Query: 454 G 454
G
Sbjct: 497 G 497
>sp|A5DZE6|DED1_LODEL ATP-dependent RNA helicase DED1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DED1 PE=3 SV=1
Length = 664
Score = 234 bits (598), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 145/369 (39%), Positives = 205/369 (55%), Gaps = 15/369 (4%)
Query: 97 VEEQERGESEHPNAVSRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTG 156
VE G E N+ + + L E +K P+Q + +V G DL+ A+TG
Sbjct: 163 VEASGEGVPEPINSFTAPPLDELLVENIKLSRFTKPTPVQKYSVPIVAAGRDLMACAQTG 222
Query: 157 QGKTLAFVLPIL-ESLTNGPTKASKKTG----YGRAPSVLVLLPTRELAKQVHEDFDVYG 211
GKT F+ P+L ES NGP + TG + P++LV+ PTREL Q++++ +
Sbjct: 223 SGKTGGFLFPVLSESYMNGPAPIPESTGAFSSHKVYPTILVMAPTRELVSQIYDESKKFA 282
Query: 212 GAVGLTSCCLYGGAPYHAQEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEAD 271
+ C +YGGA Q +L +G D+++ TPGR+KD +ERG + L+++K+ VLDEAD
Sbjct: 283 YRSWVRPCVVYGGADIGNQIRQLDRGCDLLVATPGRLKDLLERGRVSLANIKYLVLDEAD 342
Query: 272 EMLRMGFVEDVELILGKVE--DANKVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNE 329
ML MGF + I+ + + D QTL+FSAT P ++ ++ FLK I L
Sbjct: 343 RMLDMGFEPQIRHIVQECDMPDVQDRQTLMFSATFPRDIQMLARDFLKD---YIFLSVGR 399
Query: 330 KMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPG---- 385
S N+ VL + VI D++ +S G TI+FTETK A LAD L
Sbjct: 400 VGSTSENITQKVLYVEDEEKKSVILDLLNA-NSEGLTIVFTETKRMADNLADFLYDQGFP 458
Query: 386 ARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIH 445
A A+HGD Q +RE LA F+SG+ LVAT VAARGLDI +V +I + P D++ Y+H
Sbjct: 459 ATAIHGDRSQYEREKALAAFKSGQAPILVATAVAARGLDIPNVSHVINYDLPSDIDDYVH 518
Query: 446 RSGRTGRAG 454
R GRTGRAG
Sbjct: 519 RIGRTGRAG 527
>sp|Q8K9H6|DEAD_BUCAP Cold-shock DEAD box protein A homolog OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=deaD PE=3 SV=1
Length = 601
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 134/328 (40%), Positives = 197/328 (60%), Gaps = 26/328 (7%)
Query: 134 PIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRAPSVLVL 193
PIQA ++L+G D++G A+TG GKT AF LP+L +L +AP +LVL
Sbjct: 31 PIQAACIPLLLEGRDVLGMAQTGSGKTAAFSLPLLHNLNINL----------KAPQILVL 80
Query: 194 LPTRELAKQVHEDF-DVYGGAVGLTSCCLYGGAPYHAQEFKLKKGIDVVIGTPGRIKDHI 252
PTRELA QV E F D +G+ LYGG Y Q L++G +V+GTPGR+ DH+
Sbjct: 81 APTRELAVQVAEAFSDFSKYIMGIHVLPLYGGQRYEVQLRALRQGPQIVVGTPGRLLDHL 140
Query: 253 ERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQTLLFSATLPSWVKHIS 312
+RG ++LS+L VLDEADEMLRMGF+EDVE I+ ++ + QT LFSAT+P ++ IS
Sbjct: 141 KRGTLNLSNLYALVLDEADEMLRMGFIEDVETIMSQIPKEH--QTALFSATMPEAIRRIS 198
Query: 313 TKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCY--SSGGRTIIFT 370
+F+K+ ++ K++++ R + + +IR TIIF
Sbjct: 199 KRFMKNPQEI-------KIQSNITTRPDIKQSYWMVYGRKTDALIRFLEVEDFSATIIFV 251
Query: 371 ETKESASQLADLLP----GARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDIN 426
+TK + ++++ L + AL+GD+ Q+ RE TL +SG+ L+AT+VAARGLD++
Sbjct: 252 KTKNATLEVSEALERNGYNSAALNGDMNQALREQTLERLKSGRLDILIATDVAARGLDVD 311
Query: 427 DVQLIIQCEPPRDVEAYIHRSGRTGRAG 454
+ +I + P D E+Y+HR GRTGRAG
Sbjct: 312 RISFVINYDIPMDSESYVHRIGRTGRAG 339
>sp|Q5VQL1|RH14_ORYSJ DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa subsp.
japonica GN=Os01g0172200 PE=2 SV=1
Length = 708
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 134/342 (39%), Positives = 206/342 (60%), Gaps = 19/342 (5%)
Query: 120 LREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLP---ILESLTNGPT 176
LRE ++ G + PIQA ++ + L D+V A+TG GKTL +++P +L+ L
Sbjct: 192 LRE-VQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRL----- 245
Query: 177 KASKKTGYGRAPSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHAQEFKLKK 236
+ + + G P+VLVL PTRELA Q+ ++ +G + ++S CLYGGAP Q L++
Sbjct: 246 QHNSRDG----PTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLER 301
Query: 237 GIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQ 296
G D+V+ TPGR+ D +E + L + + VLDEAD ML MGF + I+ +V+ K Q
Sbjct: 302 GADIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQP--KRQ 359
Query: 297 TLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDI 356
TL+F+AT P V+ I++ L S+ +++ +++ A+ ++ V + +S+ + I
Sbjct: 360 TLMFTATWPKEVRKIASDLL-SNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQI 418
Query: 357 IRCYSSGGRTIIFTETKESASQLADLLP---GARALHGDIQQSQREVTLAGFRSGKFMTL 413
+R G + IIF TK QLA L GA A+HGD Q++R+ L+ FRSG+ L
Sbjct: 419 LRSQEPGSKIIIFCSTKRMCDQLARNLARQYGASAIHGDKSQAERDSVLSEFRSGRCPIL 478
Query: 414 VATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGV 455
VAT+VAARGLDI D+++++ + P VE Y+HR GRTGRAG
Sbjct: 479 VATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGA 520
>sp|P57453|DEAD_BUCAI Cold-shock DEAD box protein A homolog OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=deaD PE=3 SV=1
Length = 601
Score = 233 bits (593), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 197/328 (60%), Gaps = 26/328 (7%)
Query: 134 PIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRAPSVLVL 193
PIQA ++L+G D++G A+TG GKT AF LP+L +L +AP +LVL
Sbjct: 31 PIQASCIPLLLEGRDVLGMAQTGSGKTAAFSLPLLHNLNINL----------KAPQILVL 80
Query: 194 LPTRELAKQVHEDF-DVYGGAVGLTSCCLYGGAPYHAQEFKLKKGIDVVIGTPGRIKDHI 252
PTRELA QV E F D +G+ LYGG Y Q L++G +V+GTPGR+ DH+
Sbjct: 81 APTRELAVQVAEAFSDFSKYMIGIHVLPLYGGQRYELQLRALRQGPQIVVGTPGRLLDHL 140
Query: 253 ERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQTLLFSATLPSWVKHIS 312
+RG ++LS+L VLDEADEMLRMGF+EDVE I+ ++ + QT LFSAT+P ++ IS
Sbjct: 141 KRGTLNLSNLHGLVLDEADEMLRMGFIEDVETIMAQIPKEH--QTALFSATMPEAIRRIS 198
Query: 313 TKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSG--GRTIIFT 370
+F+++ K+ K++++ R + + +IR + TIIF
Sbjct: 199 KRFMRNPKEI-------KIQSNITTRPDIKQSYWMVYGRKTDALIRFLEAEDFSATIIFV 251
Query: 371 ETKESASQLADLLP----GARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDIN 426
TK + ++++ L + AL+GD+ Q+ RE TL ++G+ L+AT+VAARGLD++
Sbjct: 252 RTKNATLEVSEALERNGYNSAALNGDMNQALREQTLERLKNGRLDILIATDVAARGLDVD 311
Query: 427 DVQLIIQCEPPRDVEAYIHRSGRTGRAG 454
+ +I + P D E+Y+HR GRTGRAG
Sbjct: 312 RISFVINYDIPMDSESYVHRIGRTGRAG 339
>sp|P33906|DEAD_KLEPN Cold-shock DEAD box protein A OS=Klebsiella pneumoniae GN=deaD PE=3
SV=3
Length = 643
Score = 232 bits (592), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 141/362 (38%), Positives = 201/362 (55%), Gaps = 57/362 (15%)
Query: 116 ISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGP 175
+ P+ E L G E PIQA +LDG D++G A+TG GKT AF LP+L ++ P
Sbjct: 13 LKAPILEALTDLGYEKPSPIQAECIPHLLDGRDVLGMAQTGSGKTAAFSLPLLNNID--P 70
Query: 176 TKASKKTGYGRAPSVLVLLPTRELAKQVHEDFDVYGGAV-GLTSCCLYGGAPYHAQEFKL 234
RAP +LVL PTRELA QV E + + G+ LYGG Y Q L
Sbjct: 71 EL--------RAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLRAL 122
Query: 235 KKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANK 294
++G +V+GTPGR+ DH++RG +DLS L VLDEADEMLRMGF+EDVE I+ ++ + +
Sbjct: 123 RQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGH- 181
Query: 295 VQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIP 354
QT LFSAT+P ++ I+ +F+K ++ ++++S R P
Sbjct: 182 -QTALFSATMPEAIRRITRRFMKEPQEV-------RIQSSVTTR---------------P 218
Query: 355 DIIRCY--SSGGR----------------TIIFTETKESASQLADLLP----GARALHGD 392
DI + Y + G R IIF TK + ++A+ L + AL+GD
Sbjct: 219 DISQSYWTAYGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGD 278
Query: 393 IQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGR 452
+ Q+ RE L + G+ L+AT+VAARGLD+ + L++ + P D E+Y+HR GRTGR
Sbjct: 279 MNQALREQALERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGR 338
Query: 453 AG 454
AG
Sbjct: 339 AG 340
>sp|Q8W4R3|RH30_ARATH DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana
GN=RH30 PE=2 SV=2
Length = 591
Score = 231 bits (590), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/340 (38%), Positives = 198/340 (58%), Gaps = 15/340 (4%)
Query: 122 EKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKK 181
E + G PIQA + M L G DL+G A TG GKTLA++LP L ++ P +
Sbjct: 178 EAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQP-----R 232
Query: 182 TGYGRAPSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHAQEFKLKKGIDVV 241
G P VL+L PTRELA Q+ E+ +G G+ S C+YGGAP Q L++G+++V
Sbjct: 233 LGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIV 292
Query: 242 IGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQTLLFS 301
I TPGR+ D +E + +L + + VLDEAD ML MGF + I+ ++ QTLL+S
Sbjct: 293 IATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDR--QTLLWS 350
Query: 302 ATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYS 361
AT P V+ ++ +FL+ K I +G+ +KA+ ++ ++ + + + +++
Sbjct: 351 ATWPREVETLARQFLRDPYKAI--IGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLM 408
Query: 362 SGGRTIIFTETKESASQLA-----DLLPGARALHGDIQQSQREVTLAGFRSGKFMTLVAT 416
G + +IF ETK Q+ D P A A+HGD QS+R+ LA F+SG+ + AT
Sbjct: 409 DGSKILIFVETKRGCDQVTRQLRMDGWP-ALAIHGDKTQSERDRVLAEFKSGRSPIMTAT 467
Query: 417 NVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGVE 456
+VAARGLD+ D++ ++ + P +E YIHR GRTGRAG +
Sbjct: 468 DVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAK 507
>sp|Q5QMN3|RH20_ORYSJ DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp.
japonica GN=Os01g0197200 PE=3 SV=2
Length = 494
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/356 (39%), Positives = 205/356 (57%), Gaps = 20/356 (5%)
Query: 108 PNAVSRFR-ISVP---LREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAF 163
P V FR + P L+E K+ +E PIQ+ + M L G DL+G A TG GKTLA+
Sbjct: 87 PKPVREFRDVGFPEYVLQEITKAGFVEPT-PIQSQGWPMALRGRDLIGIAETGSGKTLAY 145
Query: 164 VLPILESLTNGPTKASKKTGYGRAPSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYG 223
+LP + + P A G P VLVL PTRELA Q+ ++ +G + + S C+YG
Sbjct: 146 LLPAIVHVNAQPILAP-----GDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYG 200
Query: 224 GAPYHAQEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVE 283
G P Q L+KG+++VI TPGR+ D IE + +L + + VLDEAD ML MGF ++
Sbjct: 201 GVPKGPQVRDLQKGVEIVIATPGRLIDMIESHHTNLRRVTYLVLDEADRMLDMGFEPQIK 260
Query: 284 LILGKVEDANKVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLP 343
I+ ++ QTL +SAT P V+ ++ FL K I +G+E++KA+ + V
Sbjct: 261 KIVSQIRPDR--QTLYWSATWPKEVEQLARNFLFDPYKVI--IGSEELKANHAISQHVEI 316
Query: 344 CSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLA-----DLLPGARALHGDIQQSQR 398
S S + + +++ G R +IF +TK+ Q+ D P A ++HGD Q++R
Sbjct: 317 LSESQKYNKLVNLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWP-ALSIHGDKSQAER 375
Query: 399 EVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG 454
+ L+ F+SGK + AT+VAARGLD+ DV+ +I + P +E Y+HR GRTGRAG
Sbjct: 376 DWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAG 431
>sp|A6ZP47|DED1_YEAS7 ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DED1 PE=3 SV=1
Length = 604
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/349 (40%), Positives = 199/349 (57%), Gaps = 21/349 (6%)
Query: 120 LREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPIL-ESLTNGPTKA 178
L E +K P+Q + +V +G DL+ A+TG GKT F+ P+L ES GP+
Sbjct: 153 LLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQ 212
Query: 179 SKKTG--YGR--APSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHAQEFKL 234
+ G Y R P+ +++ PTRELA Q+ ++ + + +C +YGG+P Q ++
Sbjct: 213 PESQGSFYQRKAYPTAVIMAPTRELATQIFDEAKKFTYRSWVKACVVYGGSPIGNQLREI 272
Query: 235 KKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANK 294
++G D+++ TPGR+ D +ERG I L+++K+ VLDEAD ML MGF + I VED +
Sbjct: 273 ERGCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMGFEPQIRHI---VEDCDM 329
Query: 295 V-----QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSAR 349
QTL+FSAT P+ ++H++ FL I L S N+ VL + +
Sbjct: 330 TPVGERQTLMFSATFPADIQHLARDFLSD---YIFLSVGRVGSTSENITQKVLYVENQDK 386
Query: 350 SQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPG----ARALHGDIQQSQREVTLAGF 405
+ D++ S+ G T+IF ETK A QL D L A A+HGD QS+RE LA F
Sbjct: 387 KSALLDLLSA-STDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAF 445
Query: 406 RSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG 454
RSG LVAT VAARGLDI +V +I + P DV+ Y+HR GRTGRAG
Sbjct: 446 RSGAATLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRAG 494
>sp|P06634|DED1_YEAST ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DED1 PE=1 SV=2
Length = 604
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/349 (40%), Positives = 199/349 (57%), Gaps = 21/349 (6%)
Query: 120 LREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPIL-ESLTNGPTKA 178
L E +K P+Q + +V +G DL+ A+TG GKT F+ P+L ES GP+
Sbjct: 153 LLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQ 212
Query: 179 SKKTG--YGR--APSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHAQEFKL 234
+ G Y R P+ +++ PTRELA Q+ ++ + + +C +YGG+P Q ++
Sbjct: 213 PESQGSFYQRKAYPTAVIMAPTRELATQIFDEAKKFTYRSWVKACVVYGGSPIGNQLREI 272
Query: 235 KKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANK 294
++G D+++ TPGR+ D +ERG I L+++K+ VLDEAD ML MGF + I VED +
Sbjct: 273 ERGCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMGFEPQIRHI---VEDCDM 329
Query: 295 V-----QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSAR 349
QTL+FSAT P+ ++H++ FL I L S N+ VL + +
Sbjct: 330 TPVGERQTLMFSATFPADIQHLARDFLSD---YIFLSVGRVGSTSENITQKVLYVENQDK 386
Query: 350 SQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPG----ARALHGDIQQSQREVTLAGF 405
+ D++ S+ G T+IF ETK A QL D L A A+HGD QS+RE LA F
Sbjct: 387 KSALLDLLSA-STDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAF 445
Query: 406 RSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG 454
RSG LVAT VAARGLDI +V +I + P DV+ Y+HR GRTGRAG
Sbjct: 446 RSGAATLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRAG 494
>sp|A3LQ01|DED1_PICST ATP-dependent RNA helicase DED1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DED1 PE=3 SV=3
Length = 647
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/362 (39%), Positives = 202/362 (55%), Gaps = 20/362 (5%)
Query: 108 PNAVSRFRISVPLREKLKSKGIESLF----PIQAMTFDMVLDGSDLVGRARTGQGKTLAF 163
P+ ++ F + PL E L S F P+Q + +V G DL+ A+TG GKT F
Sbjct: 164 PDPITSF-TAPPLDELLVENITMSRFTKPTPVQKYSVPIVAGGRDLMACAQTGSGKTGGF 222
Query: 164 VLPIL-ESLTNGPTKASKKTG----YGRAPSVLVLLPTRELAKQVHEDFDVYGGAVGLTS 218
+ P+L ES NGP ++ TG + P++LV+ PTREL Q++++ + +
Sbjct: 223 LFPVLSESYINGPAPIAESTGAFSSHKVHPTILVMAPTRELVSQIYDEAKKFAYRSWVKP 282
Query: 219 CCLYGGAPYHAQEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGF 278
+YGGA Q L KG D+++ TPGR+KD +ERG + L+++K+ VLDEAD ML MGF
Sbjct: 283 AVVYGGADIGQQIRNLDKGCDLLVATPGRLKDLLERGRVSLANIKYLVLDEADRMLDMGF 342
Query: 279 VEDVELILGKVE--DANKVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTN 336
+ I+ + + D QTL+FSAT P+ ++ ++ FLK I L S N
Sbjct: 343 EPQIRHIVQECDMPDVQDRQTLMFSATFPTDIQMLARDFLKD---YIFLSVGRVGSTSEN 399
Query: 337 VRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPG----ARALHGD 392
+ +L + V+ D++ G TIIFTETK A LAD L A A+HGD
Sbjct: 400 ITQKILYVEDEEKKSVLLDLLSA-GDAGLTIIFTETKRMADNLADFLYDQGFPATAIHGD 458
Query: 393 IQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGR 452
Q +RE LA F+SG LVAT VAARGLDI +V +I + P D++ Y+HR GRTGR
Sbjct: 459 RSQYEREKALAAFKSGAAPILVATAVAARGLDIPNVAHVINYDLPSDIDDYVHRIGRTGR 518
Query: 453 AG 454
AG
Sbjct: 519 AG 520
>sp|Q8TFK8|DED1_CANGA ATP-dependent RNA helicase DED1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DED1 PE=3 SV=1
Length = 617
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 143/365 (39%), Positives = 202/365 (55%), Gaps = 26/365 (7%)
Query: 108 PNAVSRFRISVPLR----EKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAF 163
P A++ F S PL E +K P+Q + +V G DL+ A+TG GKT F
Sbjct: 141 PEAITEF-TSPPLDSLLLENIKLARFTKPTPVQKYSVPIVSKGRDLMACAQTGSGKTGGF 199
Query: 164 VLPIL-ESLTNGPTKASKKTGYGRA----PSVLVLLPTRELAKQVHEDFDVYGGAVGLTS 218
+ P+L ES GP + + GY P+ +V+ PTRELA Q+ ++ + +
Sbjct: 200 LFPVLSESFLTGPAEKAANDGYSYQRKAFPTAVVMAPTRELATQIFDEAKKFCYRSWVKP 259
Query: 219 CCLYGGAPYHAQEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGF 278
C +YGGAP Q ++ G D+++ TPGR+ D +ERG + LS++K+ VLDEAD ML MGF
Sbjct: 260 CVVYGGAPIGNQMREMDHGCDLLVATPGRLNDLLERGKVSLSNVKYLVLDEADRMLDMGF 319
Query: 279 VEDVELILGKVEDAN-----KVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKA 333
+ I VED + + QTL+FSAT P ++H++ FL I L
Sbjct: 320 EPQIRHI---VEDCDMPPTGERQTLMFSATFPHDIQHLARDFLHD---YIFLSVGRVGST 373
Query: 334 STNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLP----GARAL 389
S N+ +L + ++ + D++ S+ T+IF ETK A QL D L A A+
Sbjct: 374 SENITQRILYVENRDKNSALLDLLAA-SNDNLTLIFVETKRMADQLTDFLIMQNFSATAI 432
Query: 390 HGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGR 449
HGD Q++RE LA FRSG+ LVAT VAARGLDI +V +I + P DV+ Y+HR GR
Sbjct: 433 HGDRSQAERERALAAFRSGRANILVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRIGR 492
Query: 450 TGRAG 454
TGRAG
Sbjct: 493 TGRAG 497
>sp|A6ZUA1|DBP3_YEAS7 ATP-dependent RNA helicase DBP3 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DBP3 PE=3 SV=1
Length = 523
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/329 (39%), Positives = 195/329 (59%), Gaps = 19/329 (5%)
Query: 134 PIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRAPSVLVL 193
PIQA+ + +L G D+VG A TG GKT AF +P + L N K R VLV+
Sbjct: 137 PIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQKK--------RGIQVLVI 188
Query: 194 LPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHAQEFKLKKGIDVVIGTPGRIKDHIE 253
PTRELA Q++++ V VG+ CC+YGG P Q +LKK VV+ TPGR+ D ++
Sbjct: 189 SPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQ 247
Query: 254 RGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQTLLFSATLPSWVKHIST 313
G++DLS + + VLDEAD ML GF ED++ I+ + DA+K QTL+F+AT P V+ +++
Sbjct: 248 EGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRET-DASKRQTLMFTATWPKEVRELAS 306
Query: 314 KFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGR----TIIF 369
F+ + K + + +++ A+ + IV + + + ++++ Y SG + +IF
Sbjct: 307 TFMNNPIK-VSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKYHSGPKKNEKVLIF 365
Query: 370 TETKESASQLADLLP----GARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDI 425
K+ A+++ L A+HGD+ Q QR L F+SGK L+AT+VAARGLDI
Sbjct: 366 ALYKKEAARVERNLKYNGYNIAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDI 425
Query: 426 NDVQLIIQCEPPRDVEAYIHRSGRTGRAG 454
+V+ +I P VE Y+HR GRTGRAG
Sbjct: 426 PNVKTVINLTFPLTVEDYVHRIGRTGRAG 454
>sp|Q89AF9|DEAD_BUCBP Cold-shock DEAD box protein A homolog OS=Buchnera aphidicola subsp.
Baizongia pistaciae (strain Bp) GN=deaD PE=3 SV=1
Length = 602
Score = 229 bits (585), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 131/328 (39%), Positives = 193/328 (58%), Gaps = 26/328 (7%)
Query: 134 PIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRAPSVLVL 193
PIQA ++ G D++G A+TG GKT AF LP+L ++ R P +LVL
Sbjct: 31 PIQAACIPYLIKGKDVLGMAQTGSGKTAAFALPLLHNIKLDV----------RVPQILVL 80
Query: 194 LPTRELAKQVHEDFDVYGG-AVGLTSCCLYGGAPYHAQEFKLKKGIDVVIGTPGRIKDHI 252
PTRELA QV E F + +G+ LYGG Y Q L+KG +++GTPGR+ DH+
Sbjct: 81 TPTRELAVQVAEAFSNFSKKLIGVHVLALYGGQRYDLQLKSLRKGPQIIVGTPGRLLDHL 140
Query: 253 ERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQTLLFSATLPSWVKHIS 312
+R + LS+L VLDEADEMLRMGF+EDVE I+ ++ D + QT LFSAT+P ++ IS
Sbjct: 141 KRRTLSLSNLHSLVLDEADEMLRMGFIEDVETIMTEIPDRH--QTALFSATMPEAIRRIS 198
Query: 313 TKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSG--GRTIIFT 370
+F+K+ K+ +++++ R + + +IR + TIIF
Sbjct: 199 RRFMKNPKEI-------RIQSNITTRPDIQQSYWMVYGKKTDALIRFLEAEDFSATIIFV 251
Query: 371 ETKESASQLADLLP----GARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDIN 426
TK + +++++L + AL+GD+ QS RE TL + G+ L+AT+VAARGLD++
Sbjct: 252 RTKNATLEVSEVLERYGYNSAALNGDMNQSLREQTLEKLKDGRLDILIATDVAARGLDVD 311
Query: 427 DVQLIIQCEPPRDVEAYIHRSGRTGRAG 454
+ +I + P D E+Y+HR GRTGRAG
Sbjct: 312 RISFVINYDIPMDSESYVHRIGRTGRAG 339
>sp|Q5JKF2|RH40_ORYSJ DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa subsp.
japonica GN=Os01g0549400 PE=2 SV=2
Length = 792
Score = 229 bits (583), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 135/339 (39%), Positives = 202/339 (59%), Gaps = 18/339 (5%)
Query: 122 EKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLP---ILESLTNGPTKA 178
++++ G S PIQA ++ + L D+V A+TG GKTL ++LP ++ L N P
Sbjct: 163 KEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNP--- 219
Query: 179 SKKTGYGRAPSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHAQEFKLKKGI 238
++G P+VLVL PTRELA Q+ E+ +G + ++S CLYGGAP Q L +G+
Sbjct: 220 --RSG----PTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLDRGV 273
Query: 239 DVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQTL 298
DVV+ TPGR+ D +E I L + + VLDEAD ML MGF + I+ ++ + QTL
Sbjct: 274 DVVVATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEI--PPRRQTL 331
Query: 299 LFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIR 358
+++AT P V+ I+ L + + + +++ A++ + V + S + + + I+R
Sbjct: 332 MYTATWPKEVRRIAEDLLVHPVQ-VTIGSVDELVANSAITQNVELITPSEKLRRLEQILR 390
Query: 359 CYSSGGRTIIFTETKESASQLADLLP---GARALHGDIQQSQREVTLAGFRSGKFMTLVA 415
SG + +IF TK QLA L GA A+HGD QS+RE L+ FRSG+ LVA
Sbjct: 391 SQDSGSKVLIFCTTKRMCDQLARTLTRQFGASAIHGDKSQSEREKVLSHFRSGRSPILVA 450
Query: 416 TNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG 454
T+VAARGLDI D++++I + P +E Y+HR GRTGRAG
Sbjct: 451 TDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAG 489
>sp|A2QI25|DED1_ASPNC ATP-dependent RNA helicase ded1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=ded1 PE=3 SV=1
Length = 678
Score = 229 bits (583), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 138/361 (38%), Positives = 202/361 (55%), Gaps = 18/361 (4%)
Query: 109 NAVSRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPIL 168
NA + + L E +K ++ P+Q + +V++G DL+ A+TG GKT F+ PIL
Sbjct: 187 NAFTNPPLDDHLIENIKLAHYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPIL 246
Query: 169 -ESLTNGPTKASKKTG----YGRA----PSVLVLLPTRELAKQVHEDFDVYGGAVGLTSC 219
++ NGP+ A + G YGR P+ L+L PTREL Q+ ++ + + C
Sbjct: 247 SQAYQNGPSAAPAQAGGQFGYGRQRKAYPTSLILAPTRELVSQIFDEARKFAYRSWVRPC 306
Query: 220 CLYGGAPYHAQEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFV 279
+YGGA +Q ++++G D+++ TPGR+ D IERG I L ++K+ +LDEAD ML MGF
Sbjct: 307 VVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKYLILDEADRMLDMGFE 366
Query: 280 EDVELIL--GKVEDANKVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNV 337
+ I+ + N QTL+FSAT P ++ ++ FLK + L S N+
Sbjct: 367 PQIRRIVEGEDMPHVNDRQTLMFSATFPRDIQMLARDFLKD---YVFLSVGRVGSTSENI 423
Query: 338 RHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPGAR----ALHGDI 393
V + V+ DI+ + + G T+IF ETK A L+D L R A+HGD
Sbjct: 424 TQKVEYVEDHDKRSVLLDILHTHGTSGLTLIFVETKRMADSLSDFLLNQRFPATAIHGDR 483
Query: 394 QQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRA 453
Q +RE L FRSG+ LVAT VAARGLDI +V +I + P D++ Y+HR GRTGRA
Sbjct: 484 TQRERERALEMFRSGRCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRA 543
Query: 454 G 454
G
Sbjct: 544 G 544
>sp|A1CXK7|DED1_NEOFI ATP-dependent RNA helicase ded1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ded1
PE=3 SV=1
Length = 676
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 141/373 (37%), Positives = 207/373 (55%), Gaps = 18/373 (4%)
Query: 97 VEEQERGESEHPNAVSRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTG 156
VE E NA + + L +K ++ P+Q + +V++G DL+ A+TG
Sbjct: 178 VEASGHDVPEPVNAFTNPPLDDHLISNIKLARYQTPTPVQKYSIPIVMNGRDLMACAQTG 237
Query: 157 QGKTLAFVLPIL-ESLTNGPT----KASKKTGYGRA----PSVLVLLPTRELAKQVHEDF 207
GKT F+ PIL ++ GP+ +AS + GYGR P+ L+L PTREL Q+ ++
Sbjct: 238 SGKTGGFLFPILSQAFQTGPSAVPAQASGQFGYGRQRKAYPTSLILAPTRELVSQIFDEA 297
Query: 208 DVYGGAVGLTSCCLYGGAPYHAQEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVL 267
+ + C +YGGA +Q ++++G D+++ TPGR+ D IERG I L ++K+ VL
Sbjct: 298 RKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKYLVL 357
Query: 268 DEADEMLRMGFVEDVELIL--GKVEDANKVQTLLFSATLPSWVKHISTKFLKSDKKTIDL 325
DEAD ML MGF + I+ + + N+ QTL+FSAT P ++ ++ FLK + L
Sbjct: 358 DEADRMLDMGFEPQIRRIVEGEDMPNVNERQTLMFSATFPRDIQMLARDFLKD---YVFL 414
Query: 326 VGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPG 385
S N+ V + V+ DI+ + + G T+IF ETK A L+D L
Sbjct: 415 SVGRVGSTSENITQKVEYVEDHDKRSVLLDILHTHGTSGLTLIFVETKRMADALSDFLLN 474
Query: 386 AR----ALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVE 441
R A+HGD Q +RE L FRSG+ LVAT VAARGLDI +V +I + P D++
Sbjct: 475 QRFPATAIHGDRTQRERERALEMFRSGRCPILVATAVAARGLDIPNVTHVINYDLPTDID 534
Query: 442 AYIHRSGRTGRAG 454
Y+HR GRTGRAG
Sbjct: 535 DYVHRIGRTGRAG 547
>sp|Q4WP13|DED1_ASPFU ATP-dependent RNA helicase ded1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=ded1
PE=3 SV=1
Length = 674
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 141/373 (37%), Positives = 207/373 (55%), Gaps = 18/373 (4%)
Query: 97 VEEQERGESEHPNAVSRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTG 156
VE E NA + + L +K ++ P+Q + +V++G DL+ A+TG
Sbjct: 176 VEASGHDVPEPVNAFTNPPLDDHLISNIKLARYQTPTPVQKYSIPIVMNGRDLMACAQTG 235
Query: 157 QGKTLAFVLPIL-ESLTNGPT----KASKKTGYGRA----PSVLVLLPTRELAKQVHEDF 207
GKT F+ PIL ++ GP+ +AS + GYGR P+ L+L PTREL Q+ ++
Sbjct: 236 SGKTGGFLFPILSQAFQTGPSPVPAQASGQFGYGRQRKAYPTSLILAPTRELVSQIFDEA 295
Query: 208 DVYGGAVGLTSCCLYGGAPYHAQEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVL 267
+ + C +YGGA +Q ++++G D+++ TPGR+ D IERG I L ++K+ VL
Sbjct: 296 RKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKYLVL 355
Query: 268 DEADEMLRMGFVEDVELIL--GKVEDANKVQTLLFSATLPSWVKHISTKFLKSDKKTIDL 325
DEAD ML MGF + I+ + + N+ QTL+FSAT P ++ ++ FLK + L
Sbjct: 356 DEADRMLDMGFEPQIRRIVEGEDMPNVNERQTLMFSATFPRDIQMLARDFLKD---YVFL 412
Query: 326 VGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPG 385
S N+ V + V+ DI+ + + G T+IF ETK A L+D L
Sbjct: 413 SVGRVGSTSENITQKVEYVEDHDKRSVLLDILHTHGTSGLTLIFVETKRMADALSDFLLN 472
Query: 386 AR----ALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVE 441
R A+HGD Q +RE L FRSG+ LVAT VAARGLDI +V +I + P D++
Sbjct: 473 QRFPATAIHGDRTQRERERALEMFRSGRCPILVATAVAARGLDIPNVTHVINYDLPTDID 532
Query: 442 AYIHRSGRTGRAG 454
Y+HR GRTGRAG
Sbjct: 533 DYVHRIGRTGRAG 545
>sp|Q6FS54|DBP3_CANGA ATP-dependent RNA helicase DBP3 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DBP3 PE=3 SV=1
Length = 540
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 200/330 (60%), Gaps = 20/330 (6%)
Query: 134 PIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRAPSVLVL 193
PIQA+++ +L G D++G A TG GKT AF +P + +L T +SK G VLV+
Sbjct: 153 PIQAVSWPYLLSGKDVIGVAETGSGKTFAFGVPAINNLL---TSSSKPKGI----KVLVI 205
Query: 194 LPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHAQEFKLKKGIDVVIGTPGRIKDHIE 253
PTRELA Q++++ + VG+ C +YGG P Q ++ K +VV+ TPGR+ D IE
Sbjct: 206 SPTRELASQIYDNLVLLTQKVGIDCCVVYGGVPKDDQRRQIAKS-NVVVATPGRLLDLIE 264
Query: 254 RGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQTLLFSATLPSWVKHIST 313
G++DLS + + VLDEAD ML GF ED++ I+G+ + ++ QTL+F+AT P V+ +++
Sbjct: 265 EGSVDLSPVDYMVLDEADRMLEKGFEEDIKRIIGQTKSKDR-QTLMFTATWPKEVRELAS 323
Query: 314 KFLKSDKKTIDLVGN-EKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSG----GRTII 368
F+K K +GN +++ A+ + IV ++ + + D+++ Y SG + +I
Sbjct: 324 TFMKEPVKVS--IGNRDELSANKRITQIVEVVDPRSKERKLLDLLKKYQSGPKKNDKVLI 381
Query: 369 FTETKESASQLADLLP----GARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLD 424
F K+ AS++ L A+HGD+ Q QR L F+SGK L+AT+VAARGLD
Sbjct: 382 FALYKKEASRVERNLNYNGYKVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLD 441
Query: 425 INDVQLIIQCEPPRDVEAYIHRSGRTGRAG 454
I +V+ +I P VE Y+HR GRTGRAG
Sbjct: 442 IPNVKTVINLTFPLTVEDYVHRIGRTGRAG 471
>sp|Q2GUI4|DBP3_CHAGB ATP-dependent RNA helicase DBP3 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=DBP3 PE=3 SV=1
Length = 566
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/345 (39%), Positives = 196/345 (56%), Gaps = 27/345 (7%)
Query: 134 PIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKK---TGYGRAPSV 190
PIQA ++ L G D++G A TG GKT+AF +P +ESL + P K T Y RA
Sbjct: 206 PIQAASWPFALSGRDVIGIAETGSGKTMAFAVPCIESLASSPKPNHAKGDRTAYARA--- 262
Query: 191 LVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHAQEFKLKK--GIDVVIGTPGRI 248
+V+ PTRELA Q H VGL+ CLYGGAP Q L+K G D+++ TPGR+
Sbjct: 263 VVVSPTRELAMQTHAAMSSLASLVGLSVVCLYGGAPKDDQRALLRKNSGADIIVATPGRL 322
Query: 249 KDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQTLLFSATLPSWV 308
KD + G + LS + F VLDEAD ML GF ED++LILG K QTL+F+AT P+ V
Sbjct: 323 KDFLSEGCVSLSDVMFAVLDEADRMLDKGFEEDIKLILGSCRPREKRQTLMFTATWPTSV 382
Query: 309 KHISTKFLKSD-KKTI----------DLVGNEKMKASTNVRHIVLPCSSSARSQVIPDII 357
+ ++ F+ K TI + G+ +++A+ + V + Q + +++
Sbjct: 383 RGLAEGFMIDPVKATIGNRTRAGEEGEGNGSTELQANIRIEQKVEVVDPRGKEQRLLELL 442
Query: 358 RCYSSGG----RTIIFTETKESASQLADLLP--GAR--ALHGDIQQSQREVTLAGFRSGK 409
+ G R ++F K+ A ++ L G R ++HGD++Q QR +L F++G
Sbjct: 443 KEAQKGSAKNDRILVFCLYKKEAVRVEQNLERRGIRVCSIHGDLRQDQRTRSLESFKAGT 502
Query: 410 FMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG 454
LVAT+VAARGLDI +V+L+I P +E Y+HR GRTGRAG
Sbjct: 503 TSVLVATDVAARGLDIPEVKLVINVTFPLTIEDYVHRIGRTGRAG 547
>sp|Q11039|DEAD_MYCTU Cold-shock DEAD box protein A homolog OS=Mycobacterium tuberculosis
GN=deaD PE=3 SV=1
Length = 563
Score = 226 bits (576), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 138/341 (40%), Positives = 195/341 (57%), Gaps = 27/341 (7%)
Query: 128 GIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRA 187
G ES IQA T ++ GSD+VG A+TG GKT AF +P+L SK +
Sbjct: 32 GYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPML----------SKIDITSKV 81
Query: 188 PSVLVLLPTRELAKQVHEDFDVYGGAVG-LTSCCLYGGAPYHAQEFKLKKGIDVVIGTPG 246
P LVL+PTRELA QV E F YG + L +YGG+ Y Q L++G VV+GTPG
Sbjct: 82 PQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGAQVVVGTPG 141
Query: 247 RIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQTLLFSATLPS 306
R+ DH+ER +DLS + F VLDEADEML MGF +DVE IL + + +V LFSAT+P
Sbjct: 142 RMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVA--LFSATMPP 199
Query: 307 WVKHISTKFLKSDKKTIDLVGNEKMKASTNV--RHIVLPCSSSARSQVIPDIIRCYSSGG 364
++ +S K+L ++ K + N+ +I + A ++V+ + + +
Sbjct: 200 AIRKLSAKYLHD---PFEVTCKAKTAVAENISQSYIQVARKMDALTRVLE--VEPFEA-- 252
Query: 365 RTIIFTETKESASQLADLLPG----ARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAA 420
I+F TK++ ++A+ L A A+ GD+ Q+QRE T+ R G LVAT+VAA
Sbjct: 253 -MIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDVAA 311
Query: 421 RGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGVEAAETI 461
RGLD+ + ++ + P D E+Y+HR GRTGRAG A I
Sbjct: 312 RGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALI 352
>sp|Q54CE0|DDX17_DICDI Probable ATP-dependent RNA helicase ddx17 OS=Dictyostelium
discoideum GN=ddx17 PE=3 SV=1
Length = 785
Score = 226 bits (576), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 197/339 (58%), Gaps = 13/339 (3%)
Query: 120 LREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKAS 179
L +++ G + PIQ+ + + L G D++G A+TG GKTLAF+LP + + P
Sbjct: 395 LMKEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSIVHINAQPVLRE 454
Query: 180 KKTGYGRAPSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHAQEFKLKKGID 239
P VLVL PTRELA Q+ E+ + +GG +++ C+YGGA H Q LKKG++
Sbjct: 455 DD-----GPIVLVLAPTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQVAALKKGVE 509
Query: 240 VVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQTLL 299
+VI TPGR+ D +E G +L + + VLDEAD ML MGF + I+ ++ QTL+
Sbjct: 510 IVIATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDR--QTLM 567
Query: 300 FSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRC 359
FSAT P V+ ++ FL +D + +G+ ++ A+ NVR IV C + + + +
Sbjct: 568 FSATWPKEVQALAHDFL-TDHIQVH-IGSTEITANHNVRQIVEVCQDFEKKERMLSFLGS 625
Query: 360 YSSGGRTIIFTETKESASQLADLL--PGARA--LHGDIQQSQREVTLAGFRSGKFMTLVA 415
+ I+F ET++ L +L G ++ +HG+ Q +R+ L+ F++G ++A
Sbjct: 626 VGRDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPIMIA 685
Query: 416 TNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG 454
T+VA+RGLDI D++ ++ + P +E YIHR GRT RAG
Sbjct: 686 TDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRTARAG 724
>sp|Q501J6|DDX17_MOUSE Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus GN=Ddx17
PE=2 SV=1
Length = 650
Score = 226 bits (575), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 134/329 (40%), Positives = 187/329 (56%), Gaps = 21/329 (6%)
Query: 134 PIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRAPSVLVL 193
PIQ F + L G D+VG A+TG GKTLA++LP + + + P G P LVL
Sbjct: 117 PIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLER-----GDGPICLVL 171
Query: 194 LPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHAQEFKLKKGIDVVIGTPGRIKDHIE 253
PTRELA+QV + D YG L S C+YGGAP Q L++G+++ I TPGR+ D +E
Sbjct: 172 APTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 231
Query: 254 RGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQTLLFSATLPSWVKHIST 313
G +L + VLDEAD ML MGF + I+ ++ QTL++SAT P V+ ++
Sbjct: 232 SGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR--QTLMWSATWPKEVRQLAE 289
Query: 314 KFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARS----QVIPDIIRCYSSGGRTIIF 369
FL+ D I+ VGN ++ A+ N+ IV C S + Q++ +I+ +TIIF
Sbjct: 290 DFLR-DYTQIN-VGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMA--EKENKTIIF 345
Query: 370 TETKESASQLA-----DLLPGARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLD 424
ETK L D P A +HGD Q +R+ L FRSGK L+AT+VA+RGLD
Sbjct: 346 VETKRRCDDLTRRMRRDGWP-AMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLD 404
Query: 425 INDVQLIIQCEPPRDVEAYIHRSGRTGRA 453
+ DV+ +I + P E Y+HR GRT R+
Sbjct: 405 VEDVKFVINYDYPNSSEDYVHRIGRTARS 433
>sp|Q2UGK3|DED1_ASPOR ATP-dependent RNA helicase ded1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=ded1 PE=3 SV=1
Length = 675
Score = 225 bits (574), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 133/336 (39%), Positives = 192/336 (57%), Gaps = 18/336 (5%)
Query: 134 PIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPIL-ESLTNGPTK----ASKKTGYGRA- 187
P+Q + +V++G DL+ A+TG GKT F+ PIL ++ NGP+ AS + YGR
Sbjct: 211 PVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPILSQAFQNGPSPTPAPASGQFSYGRQR 270
Query: 188 ---PSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHAQEFKLKKGIDVVIGT 244
P+ L+L PTREL Q+ ++ + + C +YGGA +Q ++++G D+++ T
Sbjct: 271 KAYPTSLILAPTRELVSQIFDEARKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVAT 330
Query: 245 PGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELIL--GKVEDANKVQTLLFSA 302
PGR+ D IERG I L ++K+ +LDEAD ML MGF + I+ + N QTL+FSA
Sbjct: 331 PGRLVDLIERGRISLVNIKYLILDEADRMLDMGFEPQIRRIVEGEDMPHVNDRQTLMFSA 390
Query: 303 TLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSS 362
T P ++ ++ FLK + L S N+ V + V+ DI+ + +
Sbjct: 391 TFPRDIQMLARDFLKD---YVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDILHTHGT 447
Query: 363 GGRTIIFTETKESASQLADLLPGAR----ALHGDIQQSQREVTLAGFRSGKFMTLVATNV 418
G T+IF ETK A L+D L R A+HGD Q +RE L FRSG+ LVAT V
Sbjct: 448 SGLTLIFVETKRMADSLSDFLLNQRFPATAIHGDRTQRERERALEMFRSGRCPILVATAV 507
Query: 419 AARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG 454
AARGLDI +V +I + P D++ Y+HR GRTGRAG
Sbjct: 508 AARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAG 543
>sp|Q92841|DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17 OS=Homo sapiens GN=DDX17
PE=1 SV=2
Length = 729
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/329 (40%), Positives = 187/329 (56%), Gaps = 21/329 (6%)
Query: 134 PIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRAPSVLVL 193
PIQ F + L G D+VG A+TG GKTLA++LP + + + P G P LVL
Sbjct: 196 PIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLER-----GDGPICLVL 250
Query: 194 LPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHAQEFKLKKGIDVVIGTPGRIKDHIE 253
PTRELA+QV + D YG L S C+YGGAP Q L++G+++ I TPGR+ D +E
Sbjct: 251 APTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 310
Query: 254 RGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQTLLFSATLPSWVKHIST 313
G +L + VLDEAD ML MGF + I+ ++ QTL++SAT P V+ ++
Sbjct: 311 SGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR--QTLMWSATWPKEVRQLAE 368
Query: 314 KFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARS----QVIPDIIRCYSSGGRTIIF 369
FL+ D I+ VGN ++ A+ N+ IV C S + Q++ +I+ +TIIF
Sbjct: 369 DFLR-DYTQIN-VGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMA--EKENKTIIF 424
Query: 370 TETKESASQLA-----DLLPGARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLD 424
ETK L D P A +HGD Q +R+ L FRSGK L+AT+VA+RGLD
Sbjct: 425 VETKRRCDDLTRRMRRDGWP-AMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLD 483
Query: 425 INDVQLIIQCEPPRDVEAYIHRSGRTGRA 453
+ DV+ +I + P E Y+HR GRT R+
Sbjct: 484 VEDVKFVINYDYPNSSEDYVHRIGRTARS 512
>sp|A5DQS0|DED1_PICGU ATP-dependent RNA helicase DED1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DED1 PE=3 SV=3
Length = 637
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 135/332 (40%), Positives = 186/332 (56%), Gaps = 15/332 (4%)
Query: 134 PIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPIL-ESLTNGPTKASKKTG----YGRAP 188
P+Q + +V G DL+ A+TG GKT F+ P+L ES NGP + G + P
Sbjct: 194 PVQKYSVPIVASGRDLMACAQTGSGKTGGFLFPVLSESYMNGPDAVPESQGAFSSHKVHP 253
Query: 189 SVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHAQEFKLKKGIDVVIGTPGRI 248
+ LV+ PTREL Q+ E+ + + C +YGGA Q L +G D+++ TPGR+
Sbjct: 254 TALVMAPTRELVSQIFEEAKKFSYRSWVRPCVVYGGADIGTQIRNLDRGCDLLVATPGRL 313
Query: 249 KDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVE--DANKVQTLLFSATLPS 306
KD +ERG + LS++K+ VLDEAD ML MGF + I+ + + QTL+FSAT P
Sbjct: 314 KDLLERGRVSLSNIKYLVLDEADRMLDMGFEPQIRHIVQECDMPGVESRQTLMFSATFPR 373
Query: 307 WVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSGGRT 366
++ ++ FL K I L S N+ VL + V+ D++ + G T
Sbjct: 374 DIQMLARDFL---KDYIFLSVGRVGSTSENITQKVLYVEDDEKKSVLLDLLSA-NDNGLT 429
Query: 367 IIFTETKESASQLADLLPG----ARALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARG 422
IIFTETK A LAD L A A+HGD Q +RE LA F+SG LVAT VAARG
Sbjct: 430 IIFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAAFKSGTAPILVATAVAARG 489
Query: 423 LDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG 454
LDI +V ++ + P D++ Y+HR GRTGRAG
Sbjct: 490 LDIPNVSHVVNYDLPGDIDDYVHRIGRTGRAG 521
>sp|Q6YS30|RH5_ORYSJ DEAD-box ATP-dependent RNA helicase 5 OS=Oryza sativa subsp.
japonica GN=Os07g0301200 PE=2 SV=1
Length = 512
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/335 (40%), Positives = 190/335 (56%), Gaps = 12/335 (3%)
Query: 126 SKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYG 185
KG E PIQA + +LDG D +G A TG GKT+AF +P L + + S K G
Sbjct: 109 CKGFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKG-- 166
Query: 186 RAPSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHAQEFKLKKGIDVVIGTP 245
P VLVL PTRELA+Q+ + G G++S CLYGG Q LK G+D+VIGTP
Sbjct: 167 -VPRVLVLSPTRELAQQIADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTP 225
Query: 246 GRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQTLLFSATLP 305
GR+KD IE G L+ + F VLDEAD ML MGF +V IL + A+ QT++FSAT P
Sbjct: 226 GRMKDLIEMGICRLNDVSFVVLDEADRMLDMGFEPEVRAILSQT--ASVRQTVMFSATWP 283
Query: 306 SWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSSG-- 363
V ++ +F+ + + ++G+E + A+ +V IV +R + ++ Y
Sbjct: 284 PAVHQLAQEFMDPNPIKV-VIGSEDLAANHDVMQIVEVLDDRSRDSRLVALLDKYHKAQR 342
Query: 364 GRTIIFTETKESASQLADLLP----GARALHGDIQQSQREVTLAGFRSGKFMTLVATNVA 419
R ++F K A+++ +L A ++HGD Q R L+ F+ G ++AT+VA
Sbjct: 343 NRVLVFVLYKREATRVETMLQRRGWSAVSVHGDKAQHDRTKALSLFKEGSCPLMIATDVA 402
Query: 420 ARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG 454
+RGLDI DV+++I P E Y+HR GRTGRAG
Sbjct: 403 SRGLDIPDVEVVINYSYPLTTEDYVHRIGRTGRAG 437
>sp|P44586|DEAD_HAEIN Cold-shock DEAD box protein A homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=deaD PE=3
SV=1
Length = 613
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/335 (41%), Positives = 194/335 (57%), Gaps = 27/335 (8%)
Query: 128 GIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRA 187
G E+ PIQ +L+G+D++G A+TG GKT AF LP+L + P++ +
Sbjct: 24 GFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLAQID--PSE--------KH 73
Query: 188 PSVLVLLPTRELAKQVHEDFDVY-GGAVGLTSCCLYGGAPYHAQEFKLKKGIDVVIGTPG 246
P +LV+ PTRELA QV + +++ A G LYGG Y Q LK+G VV+GTPG
Sbjct: 74 PQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALKQGAQVVVGTPG 133
Query: 247 RIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQTLLFSATLPS 306
RI DHI RG ++LS L+F VLDEADEMLRMGF++DVE ++ ++ + + QT LFSAT+P
Sbjct: 134 RILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPENH--QTALFSATMPE 191
Query: 307 WVKHISTKFLKSDKKTIDLVGNEK---MKASTNVRHIVLPCSSSARSQVIPDIIRCYSSG 363
++ I+ +F+ ++ V NE + S H V + R + D
Sbjct: 192 PIRRITKRFMNDPQEVKIKVNNENAPDIDQSCWYVHGVRKNEALLRFLEVEDF------- 244
Query: 364 GRTIIFTETKESASQLADLLP--GAR--ALHGDIQQSQREVTLAGFRSGKFMTLVATNVA 419
IIF TK + +LL G R AL+GD+ Q RE TL R+G +VAT+VA
Sbjct: 245 DAAIIFARTKTGTLDITELLEKNGFRSAALNGDMTQQLREQTLDRLRNGSLDIVVATDVA 304
Query: 420 ARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG 454
ARG+DI + L++ + P D E+Y+HR GRTGRAG
Sbjct: 305 ARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAG 339
>sp|P19109|DDX17_DROME ATP-dependent RNA helicase p62 OS=Drosophila melanogaster GN=Rm62
PE=1 SV=3
Length = 719
Score = 223 bits (569), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 215/374 (57%), Gaps = 27/374 (7%)
Query: 98 EEQE---RGESEHPNAVSRF-RISVP--LREKLKSKGIESLFPIQAMTFDMVLDGSDLVG 151
EEQE RG+ PN + F + +P + ++++ +G ++ IQA + + + GS+ VG
Sbjct: 266 EEQEITVRGQV--PNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVG 323
Query: 152 RARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRAPSVLVLLPTRELAKQVHEDFDVYG 211
A+TG GKTL ++LP + + N + G P LVL PTRELA+Q+ + +G
Sbjct: 324 IAKTGSGKTLGYILPAIVHINN-----QQPLQRGDGPIALVLAPTRELAQQIQQVATEFG 378
Query: 212 GAVGLTSCCLYGGAPYHAQEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEAD 271
+ + + C++GGAP Q L++G ++VI TPGR+ D + G+ +L + VLDEAD
Sbjct: 379 SSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEAD 438
Query: 272 EMLRMGFVEDVELILGKVEDANKVQTLLFSATLPSWVKHISTKFLKSDKKTIDL-VGNEK 330
ML MGF + I+ ++ QTL++SAT P VK ++ FL + I + +G+ +
Sbjct: 439 RMLDMGFEPQIRKIVSQIRPDR--QTLMWSATWPKEVKQLAEDFLGN---YIQINIGSLE 493
Query: 331 MKASTNVRHIVLPCSSSARSQ----VIPDIIRCYSSGGRTIIFTETKESASQLADLLP-- 384
+ A+ N+R +V C ++ + ++ DI S G+ IIF ETK L +
Sbjct: 494 LSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSF 553
Query: 385 GAR--ALHGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEA 442
G R A+HGD QS+R+ L FRSGK LVAT+VAARGLD++ ++ +I + P++ E
Sbjct: 554 GVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSED 613
Query: 443 YIHRSGRTGRAGVE 456
YIHR GRTGR+ +
Sbjct: 614 YIHRIGRTGRSNTK 627
>sp|Q0CLJ6|DED1_ASPTN ATP-dependent RNA helicase ded1 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=ded1 PE=3 SV=1
Length = 674
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 132/336 (39%), Positives = 191/336 (56%), Gaps = 18/336 (5%)
Query: 134 PIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPIL-ESLTNGPTK----ASKKTGYGRA- 187
P+Q + +V++G DL+ A+TG GKT F+ PIL ++ NGP+ A + GYGR
Sbjct: 211 PVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPILSQAFQNGPSPTPAPAGGQLGYGRQR 270
Query: 188 ---PSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHAQEFKLKKGIDVVIGT 244
P+ L+L PTREL Q+ ++ + + C +YGGA +Q ++++G D+++ T
Sbjct: 271 KAYPTSLILAPTRELVSQIFDEARKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVAT 330
Query: 245 PGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELIL--GKVEDANKVQTLLFSA 302
PGR+ D IERG I L ++K+ +LDEAD ML MGF + I+ + N QTL+FSA
Sbjct: 331 PGRLVDLIERGRISLVNIKYLILDEADRMLDMGFEPQIRRIVEGEDMPHVNDRQTLMFSA 390
Query: 303 TLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCYSS 362
T P ++ ++ FLK + L S N+ V + V+ DI+ + +
Sbjct: 391 TFPRDIQMLARDFLKD---YVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDILHTHGT 447
Query: 363 GGRTIIFTETKESASQLADLLPGAR----ALHGDIQQSQREVTLAGFRSGKFMTLVATNV 418
G T+IF ETK A L+D L R A+HGD Q +RE L FRSG+ LVAT V
Sbjct: 448 SGLTLIFVETKRMADSLSDFLLNQRFPATAIHGDRTQRERERALEMFRSGRCPILVATAV 507
Query: 419 AARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG 454
AA GLDI +V +I + P D++ Y+HR GRTGRAG
Sbjct: 508 AASGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAG 543
>sp|Q4P733|DED1_USTMA ATP-dependent RNA helicase DED1 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=DED1 PE=3 SV=1
Length = 672
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 144/365 (39%), Positives = 203/365 (55%), Gaps = 22/365 (6%)
Query: 108 PNAVSRFR---ISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFV 164
P V+ F I L E +K + P+Q + ++ G DL+G A+TG GKT F+
Sbjct: 185 PEPVTTFTSPPIDAHLLENIKLARYTNPTPVQKYSIPIIKLGRDLMGCAQTGSGKTGGFL 244
Query: 165 LPILESL-TNGPTKASK----KTGYGR---APSVLVLLPTRELAKQVHEDFDVYGGAVGL 216
PIL +L T+GP S + GY R PS L+L PTREL Q+H++ + +
Sbjct: 245 FPILSALFTHGPPPPSAAEMAQGGYNRRKAYPSTLILAPTRELVSQIHDEARKFTYRSWV 304
Query: 217 TSCCLYGGAPYHAQEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRM 276
+YGGA Q ++++G D++ TPGR+ D +ERG I LS+++F VLDEAD ML M
Sbjct: 305 KPAVVYGGADIVTQLRQIERGCDLLSATPGRLVDLMERGRISLSNVRFLVLDEADRMLDM 364
Query: 277 GFVEDVELILGKVEDANKV---QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKA 333
GF + I+ + ED V QTL+FSAT P ++ ++ FL K+ + L
Sbjct: 365 GFEPQIRRIV-EGEDMPGVMDRQTLMFSATFPRDIQLLAKDFL---KEYVFLSVGRVGST 420
Query: 334 STNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLL----PGARAL 389
S N+ + + V+ D++ SGG T+IF ETK A L+D L GA ++
Sbjct: 421 SENITQKIEYVEDDDKRSVLLDVLASMPSGGLTLIFVETKRMADMLSDFLLRSKIGATSI 480
Query: 390 HGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGR 449
HGD Q +RE L FRSGK +VAT VAARGLDI +V ++ + P DV+ Y+HR GR
Sbjct: 481 HGDRTQRERERALELFRSGKTPIMVATAVAARGLDIPNVTHVVNYDLPSDVDDYVHRIGR 540
Query: 450 TGRAG 454
TGRAG
Sbjct: 541 TGRAG 545
>sp|Q6BU54|DED1_DEBHA ATP-dependent RNA helicase DED1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DED1 PE=3 SV=1
Length = 630
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 138/349 (39%), Positives = 194/349 (55%), Gaps = 21/349 (6%)
Query: 120 LREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPIL-ESLTNGPTKA 178
L E +K P+Q + +V G DL+ A+TG GKT F+ P+L ES NGP +
Sbjct: 167 LVENVKLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESYMNGPAEV 226
Query: 179 SKKTG----YGRAPSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHAQEFKL 234
+ G + P+ LV+ PTREL Q+ ++ + + +YGGA Q L
Sbjct: 227 PETAGAFSSHKVYPTALVMAPTRELVSQIFDEAKKFAYRSWVRPSVVYGGADIGGQIRNL 286
Query: 235 KKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGK-----V 289
++G D+++ TPGR+KD +ERG + L+S+K+ VLDEAD ML MGF + I+ + V
Sbjct: 287 ERGCDLLVATPGRLKDLLERGRVSLASIKYLVLDEADRMLDMGFEPQIRHIVQECDMPGV 346
Query: 290 EDANKVQTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSAR 349
ED QTL+FSAT P ++ ++ FL K+ I L S N+ +L +
Sbjct: 347 EDR---QTLMFSATFPKEIQFLARDFL---KEYIFLSVGRVGSTSENITQKILYVEDEEK 400
Query: 350 SQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPG----ARALHGDIQQSQREVTLAGF 405
V+ D++ + G TIIFTETK A LAD L A A+HGD Q +RE LA F
Sbjct: 401 KSVLLDLLSA-NDNGLTIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAAF 459
Query: 406 RSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG 454
++G LVAT VAARGLDI +V I+ + P D++ Y+HR GRTGRAG
Sbjct: 460 KTGTAPILVATAVAARGLDIPNVSHIVNYDLPSDIDDYVHRIGRTGRAG 508
>sp|Q9C551|RH5_ARATH DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana
GN=RH5 PE=1 SV=1
Length = 537
Score = 223 bits (567), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 195/339 (57%), Gaps = 18/339 (5%)
Query: 126 SKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYG 185
K E PIQ+ T+ +LDG DL+G A+TG GKTLAF +P + + K +KK G G
Sbjct: 131 CKTFEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVL----KKNKKIGGG 186
Query: 186 RA---PSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHAQEFKLKKGIDVVI 242
P+ LVL PTRELA Q+ + G GL S C+YGG+ Q ++ G+D+VI
Sbjct: 187 SKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVI 246
Query: 243 GTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKV-QTLLFS 301
GTPGR++D IE + LS + F VLDEAD ML MGF E V IL + NKV Q ++FS
Sbjct: 247 GTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILS---NTNKVRQMVMFS 303
Query: 302 ATLPSWVKHISTKFLKSDKKTIDLVGNEKMKASTNVRHIVLPCSSSARSQVIPDIIRCY- 360
AT P V ++ +F+ + + ++G+ + A+ +V I+ AR Q + ++ Y
Sbjct: 304 ATWPLDVHKLAQEFMDPNPIKV-IIGSVDLAANHDVMQIIEVLDERARDQRLIALLEKYH 362
Query: 361 -SSGGRTIIFTETKESASQLADLLPG----ARALHGDIQQSQREVTLAGFRSGKFMTLVA 415
S R ++F K A +L L A ++HG+ QS+R +L+ F+ G LVA
Sbjct: 363 KSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVA 422
Query: 416 TNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG 454
T+VAARGLDI DV+++I P E Y+HR GRTGRAG
Sbjct: 423 TDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAG 461
>sp|Q0UWA6|DED1_PHANO ATP-dependent RNA helicase DED1 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=DED1 PE=3 SV=1
Length = 696
Score = 223 bits (567), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 141/365 (38%), Positives = 208/365 (56%), Gaps = 24/365 (6%)
Query: 108 PNAVSRFRISVPLREKLKSK----GIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAF 163
P V+RF + PL + L S G + P+Q + +V+ G DL+ A+TG GKT F
Sbjct: 197 PEPVTRF-TNPPLDDHLLSNIELSGYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGF 255
Query: 164 VLPIL-ESLTNGPT--KASKKTGYGRA----PSVLVLLPTRELAKQVHEDFDVYGGAVGL 216
+ PIL ++ NGP+ ++ GYGR P+ L+L PTREL Q+ ++ + +
Sbjct: 256 LFPILAQAFQNGPSPPPTAQAGGYGRQRKAYPTSLILAPTRELVSQIFDEARKFAYRSWV 315
Query: 217 TSCCLYGGAPYHAQEFKLKKGIDVVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRM 276
C +YGGA +Q ++++G D+++ TPGR+ D IERG I L+S+K+ VLDEAD ML M
Sbjct: 316 RPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLASIKYLVLDEADRMLDM 375
Query: 277 GFVEDVELILGKVEDANKV---QTLLFSATLPSWVKHISTKFLKSDKKTIDLVGNEKMKA 333
GF + I+ + ED QTL+FSAT P ++ ++ FL K+ I L
Sbjct: 376 GFEPQIRRIV-EGEDMPPTAGRQTLMFSATFPRDIQMLARDFL---KEYIFLSVGRVGST 431
Query: 334 STNVRHIVLPCSSSARSQVIPDIIRCYSSGGRTIIFTETKESASQLADLLPG----ARAL 389
S N+ + + + V+ DI+ + + G ++IF ETK A L+D L A ++
Sbjct: 432 SENITQKIEYVEDADKRSVLLDILHTHGA-GLSLIFVETKRMADSLSDFLINQGFPATSI 490
Query: 390 HGDIQQSQREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGR 449
HGD Q +RE L FRSG+ LVAT VAARGLDI +V ++ + P D++ Y+HR GR
Sbjct: 491 HGDRTQREREKALEMFRSGRCPILVATAVAARGLDIPNVTHVVNYDLPTDIDDYVHRIGR 550
Query: 450 TGRAG 454
TGRAG
Sbjct: 551 TGRAG 555
>sp|Q9LYJ9|RH46_ARATH DEAD-box ATP-dependent RNA helicase 46 OS=Arabidopsis thaliana
GN=RH46 PE=2 SV=2
Length = 645
Score = 222 bits (566), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 133/343 (38%), Positives = 196/343 (57%), Gaps = 23/343 (6%)
Query: 120 LREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKAS 179
LRE + S G + PIQA ++ + + D+V A+TG GKTL +++P L
Sbjct: 173 LRE-VYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQR--IHND 229
Query: 180 KKTGYGRAPSVLVLLPTRELAKQVHEDFDVYGGAVGLTSCCLYGGAPYHAQEFKLKKGID 239
+ G P++LVL PTRELA Q+ + +G + ++ CLYGGAP Q ++++G+D
Sbjct: 230 SRMG----PTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVD 285
Query: 240 VVIGTPGRIKDHIERGNIDLSSLKFRVLDEADEMLRMGFVEDVELILGKVEDANKVQTLL 299
+V+ TPGR+ D +E I L + + VLDEAD ML MGF + I+ +V K QTL+
Sbjct: 286 IVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEV--PTKRQTLM 343
Query: 300 FSATLPSWVKHISTKFLKSDKK----TID-LVGNEKMKASTNVRHIVLPCSSSARSQVIP 354
++AT P V+ I+ L + + +D LV N K+ T ++ P +R +
Sbjct: 344 YTATWPKEVRKIAADLLVNPAQVNIGNVDELVAN---KSITQTIEVLAPMEKHSR---LE 397
Query: 355 DIIRCYSSGGRTIIFTETKESASQLADLLP---GARALHGDIQQSQREVTLAGFRSGKFM 411
I+R G + IIF TK QLA L GA A+HGD Q++R+ L FRSG+
Sbjct: 398 QILRSQEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTP 457
Query: 412 TLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG 454
LVAT+VAARGLD+ D+++++ + P VE Y+HR GRTGRAG
Sbjct: 458 VLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAG 500
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.133 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 243,975,682
Number of Sequences: 539616
Number of extensions: 11401856
Number of successful extensions: 149371
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2985
Number of HSP's successfully gapped in prelim test: 2569
Number of HSP's that attempted gapping in prelim test: 77934
Number of HSP's gapped (non-prelim): 38789
length of query: 652
length of database: 191,569,459
effective HSP length: 124
effective length of query: 528
effective length of database: 124,657,075
effective search space: 65818935600
effective search space used: 65818935600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)