Query 006275
Match_columns 652
No_of_seqs 512 out of 3747
Neff 7.5
Searched_HMMs 46136
Date Thu Mar 28 20:54:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006275.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006275hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0488 Uup ATPase components 100.0 2.1E-95 5E-100 806.0 58.8 523 96-633 2-528 (530)
2 PRK10636 putative ABC transpor 100.0 3.2E-89 6.9E-94 785.2 64.0 516 97-630 1-517 (638)
3 PRK11147 ABC transporter ATPas 100.0 2.1E-88 4.6E-93 779.7 65.4 521 97-630 3-528 (635)
4 PRK11819 putative ABC transpor 100.0 9.7E-87 2.1E-91 755.9 65.2 526 96-633 5-536 (556)
5 PRK15064 ABC transporter ATP-b 100.0 3.5E-86 7.6E-91 748.3 64.8 525 97-632 1-527 (530)
6 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.9E-85 4.1E-90 745.1 65.2 523 97-631 4-532 (552)
7 KOG0927 Predicted transporter 100.0 8E-86 1.7E-90 698.9 43.5 523 93-632 71-598 (614)
8 PLN03073 ABC transporter F fam 100.0 2.7E-82 5.8E-87 730.6 63.9 520 94-631 174-715 (718)
9 COG1123 ATPase components of v 100.0 1.8E-82 3.8E-87 690.0 48.1 454 96-631 4-520 (539)
10 PRK10261 glutathione transport 100.0 2.3E-81 4.9E-86 719.5 52.3 471 95-629 10-552 (623)
11 PRK13549 xylose transporter AT 100.0 6E-82 1.3E-86 710.0 45.2 442 96-627 4-491 (506)
12 PRK09700 D-allose transporter 100.0 5.5E-81 1.2E-85 703.1 48.9 442 96-620 4-489 (510)
13 PRK15439 autoinducer 2 ABC tra 100.0 1.1E-80 2.3E-85 699.8 48.8 443 95-628 9-490 (510)
14 TIGR03269 met_CoM_red_A2 methy 100.0 3.1E-80 6.7E-85 698.5 52.0 432 98-630 1-517 (520)
15 PRK15134 microcin C ABC transp 100.0 1.6E-80 3.5E-85 702.0 49.7 445 96-630 4-515 (529)
16 TIGR02633 xylG D-xylose ABC tr 100.0 2.6E-80 5.6E-85 696.2 46.3 436 98-620 2-483 (500)
17 PRK10762 D-ribose transporter 100.0 2.3E-80 5E-85 696.3 44.7 437 97-627 4-481 (501)
18 PRK11288 araG L-arabinose tran 100.0 4.4E-80 9.6E-85 694.0 45.9 439 96-627 3-482 (501)
19 PRK10938 putative molybdenum t 100.0 4.5E-79 9.7E-84 684.5 45.0 434 97-621 3-484 (490)
20 PRK10982 galactose/methyl gala 100.0 4.6E-79 1E-83 684.4 44.4 430 100-620 1-471 (491)
21 KOG0055 Multidrug/pheromone ex 100.0 1.4E-76 3E-81 684.5 47.6 541 50-636 305-1219(1228)
22 KOG0054 Multidrug resistance-a 100.0 4.8E-75 1.1E-79 686.5 45.5 553 24-635 453-1367(1381)
23 COG4172 ABC-type uncharacteriz 100.0 1.7E-74 3.7E-79 593.0 43.2 452 95-636 4-522 (534)
24 PRK13409 putative ATPase RIL; 100.0 2.7E-73 5.9E-78 645.0 43.8 419 102-619 78-532 (590)
25 KOG0062 ATPase component of AB 100.0 1.3E-73 2.8E-78 602.9 34.5 487 95-630 78-569 (582)
26 PLN03130 ABC transporter C fam 100.0 1.1E-71 2.3E-76 690.1 52.9 486 96-631 613-1462(1622)
27 PLN03232 ABC transporter C fam 100.0 2.7E-71 5.8E-76 686.2 49.4 488 96-632 613-1460(1495)
28 TIGR00957 MRP_assoc_pro multi 100.0 2.4E-70 5.2E-75 678.6 53.0 208 418-631 1278-1509(1522)
29 COG1129 MglA ABC-type sugar tr 100.0 9E-71 2E-75 595.0 41.2 433 95-620 6-481 (500)
30 PTZ00265 multidrug resistance 100.0 4.4E-67 9.6E-72 643.5 54.2 204 423-630 1164-1452(1466)
31 TIGR01271 CFTR_protein cystic 100.0 1.6E-66 3.5E-71 642.7 56.1 206 418-630 1211-1440(1490)
32 PTZ00243 ABC transporter; Prov 100.0 5E-66 1.1E-70 638.8 54.7 204 422-631 1306-1534(1560)
33 COG3845 ABC-type uncharacteriz 100.0 2.3E-66 4.9E-71 549.3 40.1 437 96-620 3-483 (501)
34 KOG0066 eIF2-interacting prote 100.0 7.1E-67 1.5E-71 538.4 33.7 510 96-630 263-791 (807)
35 TIGR01257 rim_protein retinal- 100.0 4.2E-63 9.1E-68 607.9 60.1 206 423-632 1936-2161(2272)
36 TIGR00956 3a01205 Pleiotropic 100.0 2.7E-60 5.8E-65 583.0 47.3 199 423-625 758-988 (1394)
37 PLN03140 ABC transporter G fam 100.0 1.3E-57 2.8E-62 557.6 46.2 198 424-625 867-1105(1470)
38 COG1126 GlnQ ABC-type polar am 100.0 5.8E-52 1.2E-56 398.1 22.5 210 97-346 2-225 (240)
39 COG1245 Predicted ATPase, RNas 100.0 8.4E-50 1.8E-54 416.0 34.4 433 102-615 79-531 (591)
40 COG1126 GlnQ ABC-type polar am 100.0 1.5E-50 3.2E-55 388.4 23.3 205 423-631 1-226 (240)
41 COG1116 TauB ABC-type nitrate/ 100.0 1.7E-48 3.7E-53 385.1 21.6 196 97-332 3-207 (248)
42 COG1125 OpuBA ABC-type proline 100.0 1.3E-48 2.8E-53 381.9 20.2 211 97-347 1-226 (309)
43 COG1135 AbcC ABC-type metal io 100.0 5E-48 1.1E-52 388.7 21.7 209 97-346 1-231 (339)
44 COG1127 Ttg2A ABC-type transpo 100.0 1E-47 2.2E-52 374.3 22.3 218 95-351 6-240 (263)
45 COG1125 OpuBA ABC-type proline 100.0 2.3E-47 4.9E-52 373.2 20.1 209 424-635 1-230 (309)
46 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 4.5E-47 9.9E-52 379.9 22.4 213 96-346 3-227 (254)
47 COG1120 FepC ABC-type cobalami 100.0 3.2E-47 6.9E-52 383.0 20.1 212 97-345 2-227 (258)
48 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.7E-46 5.9E-51 374.3 23.2 206 423-631 3-228 (254)
49 COG1120 FepC ABC-type cobalami 100.0 1.9E-46 4E-51 377.5 20.9 203 424-630 2-228 (258)
50 COG1127 Ttg2A ABC-type transpo 100.0 3.2E-46 6.9E-51 363.8 21.7 213 422-637 6-242 (263)
51 COG1116 TauB ABC-type nitrate/ 100.0 3.1E-46 6.8E-51 369.0 21.1 191 423-616 2-207 (248)
52 COG1136 SalX ABC-type antimicr 100.0 9.5E-46 2.1E-50 365.4 23.6 197 98-334 2-220 (226)
53 COG1124 DppF ABC-type dipeptid 100.0 6.2E-46 1.3E-50 363.6 20.9 208 423-631 2-232 (252)
54 COG1124 DppF ABC-type dipeptid 100.0 1.2E-45 2.6E-50 361.6 21.9 206 96-343 2-228 (252)
55 COG3842 PotA ABC-type spermidi 100.0 7.8E-46 1.7E-50 388.5 20.6 212 96-347 4-227 (352)
56 COG1135 AbcC ABC-type metal io 100.0 1.5E-45 3.3E-50 370.7 21.5 202 424-629 1-230 (339)
57 COG3839 MalK ABC-type sugar tr 100.0 1.7E-45 3.7E-50 383.9 22.5 209 96-345 2-222 (338)
58 COG1118 CysA ABC-type sulfate/ 100.0 1.3E-45 2.8E-50 370.3 18.6 209 97-344 2-225 (345)
59 COG3638 ABC-type phosphate/pho 100.0 5.3E-45 1.1E-49 354.3 21.7 216 96-344 2-235 (258)
60 PRK00349 uvrA excinuclease ABC 100.0 7.4E-44 1.6E-48 417.1 34.6 340 234-633 465-930 (943)
61 COG3842 PotA ABC-type spermidi 100.0 6.6E-45 1.4E-49 381.5 20.6 206 423-632 4-228 (352)
62 PRK13537 nodulation ABC transp 100.0 5.4E-44 1.2E-48 376.4 26.8 208 96-344 6-225 (306)
63 COG1122 CbiO ABC-type cobalt t 100.0 2.9E-44 6.2E-49 361.2 23.1 210 96-346 2-228 (235)
64 TIGR02314 ABC_MetN D-methionin 100.0 5.8E-44 1.3E-48 379.9 26.5 208 97-345 1-229 (343)
65 COG2884 FtsE Predicted ATPase 100.0 2E-44 4.3E-49 338.7 19.0 202 97-338 1-219 (223)
66 cd03261 ABC_Org_Solvent_Resist 100.0 8.2E-44 1.8E-48 361.8 25.0 207 98-344 1-224 (235)
67 PRK11650 ugpC glycerol-3-phosp 100.0 1.2E-43 2.6E-48 380.2 26.3 208 97-345 3-223 (356)
68 PRK11432 fbpC ferric transport 100.0 1.8E-43 3.9E-48 377.9 27.0 210 95-345 4-225 (351)
69 TIGR00960 3a0501s02 Type II (G 100.0 9.5E-44 2.1E-48 356.6 23.3 197 97-333 1-215 (216)
70 cd03259 ABC_Carb_Solutes_like 100.0 1.1E-43 2.4E-48 355.4 23.6 198 98-335 1-210 (213)
71 TIGR00630 uvra excinuclease AB 100.0 1.2E-42 2.6E-47 406.2 35.5 327 242-627 470-922 (924)
72 COG4555 NatA ABC-type Na+ tran 100.0 3.1E-44 6.7E-49 340.0 17.9 209 97-346 1-222 (245)
73 PRK13536 nodulation factor exp 100.0 2.9E-43 6.2E-48 375.0 27.5 210 94-344 38-259 (340)
74 COG3839 MalK ABC-type sugar tr 100.0 1E-43 2.2E-48 370.6 23.0 202 424-629 3-222 (338)
75 COG1131 CcmA ABC-type multidru 100.0 2E-43 4.3E-48 369.0 25.2 207 97-344 4-224 (293)
76 COG1118 CysA ABC-type sulfate/ 100.0 3.9E-44 8.5E-49 359.6 19.0 204 424-631 2-228 (345)
77 PRK00635 excinuclease ABC subu 100.0 1.3E-42 2.8E-47 421.4 36.0 328 243-630 460-906 (1809)
78 TIGR03265 PhnT2 putative 2-ami 100.0 2.8E-43 6.1E-48 376.9 26.7 209 96-345 3-223 (353)
79 COG3638 ABC-type phosphate/pho 100.0 9.4E-44 2E-48 345.6 19.9 202 423-628 2-235 (258)
80 cd03265 ABC_DrrA DrrA is the A 100.0 3.7E-43 8E-48 353.4 25.0 204 98-342 1-217 (220)
81 PRK09452 potA putrescine/sperm 100.0 5.5E-43 1.2E-47 376.6 27.2 211 94-345 11-233 (375)
82 COG1136 SalX ABC-type antimicr 100.0 3.3E-43 7.1E-48 347.4 23.0 193 424-619 1-221 (226)
83 TIGR01288 nodI ATP-binding ABC 100.0 4.9E-43 1.1E-47 369.1 25.8 207 97-344 4-222 (303)
84 COG1122 CbiO ABC-type cobalt t 100.0 2.7E-43 5.8E-48 354.2 22.0 207 423-632 2-230 (235)
85 TIGR03258 PhnT 2-aminoethylpho 100.0 7.1E-43 1.5E-47 374.4 25.8 208 97-345 5-227 (362)
86 PRK11000 maltose/maltodextrin 100.0 8.7E-43 1.9E-47 375.8 26.2 208 97-345 3-222 (369)
87 cd03296 ABC_CysA_sulfate_impor 100.0 9E-43 1.9E-47 355.1 24.8 211 97-344 2-224 (239)
88 PRK11607 potG putrescine trans 100.0 1.7E-42 3.6E-47 373.5 28.0 210 95-345 17-238 (377)
89 cd03301 ABC_MalK_N The N-termi 100.0 8.1E-43 1.8E-47 349.0 23.7 198 98-335 1-210 (213)
90 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 6.1E-43 1.3E-47 351.2 22.6 195 98-333 1-217 (218)
91 PRK11831 putative ABC transpor 100.0 1.3E-42 2.8E-47 360.0 25.5 211 95-345 5-232 (269)
92 PRK10851 sulfate/thiosulfate t 100.0 1.6E-42 3.4E-47 371.1 26.7 212 97-345 2-225 (353)
93 TIGR02673 FtsE cell division A 100.0 9.2E-43 2E-47 348.9 23.3 197 97-333 1-214 (214)
94 cd03219 ABC_Mj1267_LivG_branch 100.0 1.2E-42 2.7E-47 353.2 24.3 216 98-344 1-230 (236)
95 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.3E-42 2.8E-47 349.5 24.1 198 98-335 1-213 (220)
96 PRK11153 metN DL-methionine tr 100.0 1.7E-42 3.8E-47 370.4 26.0 207 97-344 1-228 (343)
97 TIGR03522 GldA_ABC_ATP gliding 100.0 2.4E-42 5.2E-47 363.5 26.4 206 98-344 3-219 (301)
98 cd03269 ABC_putative_ATPase Th 100.0 2.6E-42 5.6E-47 344.7 24.9 198 98-335 1-207 (210)
99 cd03261 ABC_Org_Solvent_Resist 100.0 2.4E-42 5.2E-47 351.0 25.0 203 425-631 1-227 (235)
100 COG1137 YhbG ABC-type (unclass 100.0 7.6E-44 1.7E-48 337.0 12.6 213 96-347 3-229 (243)
101 cd03266 ABC_NatA_sodium_export 100.0 1.6E-42 3.5E-47 348.2 23.0 199 97-335 1-215 (218)
102 PRK10619 histidine/lysine/argi 100.0 4.9E-42 1.1E-46 353.4 27.0 211 96-345 4-240 (257)
103 PRK11264 putative amino-acid A 100.0 3.8E-42 8.3E-47 352.7 26.0 209 97-345 3-232 (250)
104 cd03263 ABC_subfamily_A The AB 100.0 2.5E-42 5.5E-47 347.2 24.2 204 98-342 1-217 (220)
105 cd03218 ABC_YhbG The ABC trans 100.0 2.7E-42 5.9E-47 349.8 24.6 206 98-344 1-220 (232)
106 cd03226 ABC_cobalt_CbiO_domain 100.0 1E-42 2.3E-47 346.3 21.0 192 99-334 1-204 (205)
107 PRK09493 glnQ glutamine ABC tr 100.0 4.3E-42 9.2E-47 350.3 25.6 209 97-345 1-224 (240)
108 PRK13537 nodulation ABC transp 100.0 4.5E-42 9.7E-47 361.8 26.6 206 422-631 5-228 (306)
109 cd03258 ABC_MetN_methionine_tr 100.0 2.8E-42 6.1E-47 350.0 23.9 207 97-344 1-228 (233)
110 cd03264 ABC_drug_resistance_li 100.0 3.4E-42 7.3E-47 344.2 23.9 197 98-335 1-208 (211)
111 PRK13634 cbiO cobalt transport 100.0 3.4E-42 7.3E-47 360.5 24.9 208 98-345 3-234 (290)
112 PRK13651 cobalt transporter AT 100.0 4.3E-42 9.4E-47 361.4 25.8 210 97-346 2-254 (305)
113 PRK11247 ssuB aliphatic sulfon 100.0 3.2E-42 6.9E-47 354.1 24.2 198 96-340 11-217 (257)
114 COG1117 PstB ABC-type phosphat 100.0 6.2E-43 1.3E-47 334.3 17.5 207 422-632 5-239 (253)
115 PRK10908 cell division protein 100.0 4.4E-42 9.6E-47 346.0 24.7 198 98-335 2-216 (222)
116 TIGR00960 3a0501s02 Type II (G 100.0 3E-42 6.5E-47 345.8 23.2 192 424-618 1-216 (216)
117 TIGR02314 ABC_MetN D-methionin 100.0 3.9E-42 8.6E-47 365.8 25.5 203 424-630 1-230 (343)
118 PRK11248 tauB taurine transpor 100.0 3.9E-42 8.4E-47 353.5 24.6 199 97-335 1-210 (255)
119 COG0411 LivG ABC-type branched 100.0 8.7E-43 1.9E-47 341.7 18.7 222 96-346 3-239 (250)
120 cd03268 ABC_BcrA_bacitracin_re 100.0 3.5E-42 7.6E-47 343.3 23.5 194 98-335 1-205 (208)
121 COG4555 NatA ABC-type Na+ tran 100.0 5.5E-43 1.2E-47 331.6 16.7 205 424-630 1-222 (245)
122 PRK09536 btuD corrinoid ABC tr 100.0 4E-42 8.6E-47 372.1 25.8 213 96-345 2-227 (402)
123 PRK13637 cbiO cobalt transport 100.0 6.6E-42 1.4E-46 357.7 26.2 209 97-345 2-233 (287)
124 cd03292 ABC_FtsE_transporter F 100.0 3.9E-42 8.4E-47 344.3 23.5 196 98-333 1-213 (214)
125 COG1131 CcmA ABC-type multidru 100.0 4.7E-42 1E-46 358.7 24.8 206 424-633 4-229 (293)
126 TIGR02315 ABC_phnC phosphonate 100.0 3.1E-42 6.8E-47 351.8 22.7 215 97-344 1-233 (243)
127 cd03262 ABC_HisP_GlnQ_permease 100.0 4.3E-42 9.4E-47 343.7 23.2 197 98-333 1-212 (213)
128 TIGR03265 PhnT2 putative 2-ami 100.0 6.7E-42 1.5E-46 366.3 26.3 205 423-631 3-225 (353)
129 cd03295 ABC_OpuCA_Osmoprotecti 100.0 5.8E-42 1.3E-46 349.7 24.6 207 98-344 1-223 (242)
130 PRK11650 ugpC glycerol-3-phosp 100.0 6.1E-42 1.3E-46 367.0 25.8 204 424-631 3-225 (356)
131 cd03256 ABC_PhnC_transporter A 100.0 4.3E-42 9.3E-47 350.3 23.5 214 98-344 1-232 (241)
132 PRK13643 cbiO cobalt transport 100.0 7.7E-42 1.7E-46 357.4 26.0 210 97-346 1-233 (288)
133 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 8.3E-42 1.8E-46 347.3 25.3 207 97-345 1-220 (236)
134 cd03259 ABC_Carb_Solutes_like 100.0 5.2E-42 1.1E-46 343.3 23.3 193 425-620 1-211 (213)
135 cd03225 ABC_cobalt_CbiO_domain 100.0 3.4E-42 7.4E-47 344.0 22.0 195 99-333 1-211 (211)
136 PRK13641 cbiO cobalt transport 100.0 8.9E-42 1.9E-46 356.9 25.9 209 97-345 2-233 (287)
137 COG1117 PstB ABC-type phosphat 100.0 1.4E-42 3E-47 331.9 17.8 211 95-346 5-237 (253)
138 PRK11432 fbpC ferric transport 100.0 8.6E-42 1.9E-46 364.9 26.1 205 422-630 4-226 (351)
139 TIGR01188 drrA daunorubicin re 100.0 5.3E-42 1.1E-46 361.1 24.1 199 105-344 1-211 (302)
140 TIGR02211 LolD_lipo_ex lipopro 100.0 8.6E-42 1.9E-46 343.6 24.4 196 98-334 2-219 (221)
141 PRK10895 lipopolysaccharide AB 100.0 7.3E-42 1.6E-46 348.8 24.1 209 97-345 3-225 (241)
142 PRK11124 artP arginine transpo 100.0 1.2E-41 2.7E-46 347.3 25.5 208 97-344 2-228 (242)
143 PRK13647 cbiO cobalt transport 100.0 9E-42 2E-46 354.5 24.8 206 97-343 4-224 (274)
144 COG0411 LivG ABC-type branched 100.0 1.7E-42 3.6E-47 339.8 18.1 207 423-631 3-240 (250)
145 PRK15079 oligopeptide ABC tran 100.0 1.5E-41 3.2E-46 360.8 26.6 213 95-345 6-250 (331)
146 TIGR01186 proV glycine betaine 100.0 7.6E-42 1.6E-46 365.7 24.4 201 105-346 1-219 (363)
147 PRK13631 cbiO cobalt transport 100.0 1.6E-41 3.6E-46 359.1 26.7 212 94-345 18-264 (320)
148 cd03260 ABC_PstB_phosphate_tra 100.0 7.4E-42 1.6E-46 345.5 22.8 202 98-340 1-223 (227)
149 PRK13646 cbiO cobalt transport 100.0 1.1E-41 2.5E-46 355.8 25.0 209 98-346 3-235 (286)
150 COG2884 FtsE Predicted ATPase 100.0 3.1E-42 6.6E-47 323.9 18.3 195 424-621 1-218 (223)
151 TIGR00972 3a0107s01c2 phosphat 100.0 1.8E-41 3.9E-46 347.1 25.6 208 97-344 1-230 (247)
152 cd03226 ABC_cobalt_CbiO_domain 100.0 6E-42 1.3E-46 340.9 21.3 192 426-619 1-205 (205)
153 cd03224 ABC_TM1139_LivF_branch 100.0 1.2E-41 2.5E-46 342.8 23.6 203 98-343 1-218 (222)
154 PRK11629 lolD lipoprotein tran 100.0 1.8E-41 3.9E-46 344.2 25.2 199 96-335 4-224 (233)
155 PRK10070 glycine betaine trans 100.0 1.7E-41 3.7E-46 367.0 26.5 194 111-345 42-253 (400)
156 TIGR03411 urea_trans_UrtD urea 100.0 2.1E-41 4.5E-46 345.6 25.7 216 97-345 2-230 (242)
157 PRK13536 nodulation factor exp 100.0 2E-41 4.3E-46 360.9 26.6 207 421-631 38-262 (340)
158 cd03235 ABC_Metallic_Cations A 100.0 6.7E-42 1.4E-46 342.5 21.5 199 99-333 1-209 (213)
159 PRK10584 putative ABC transpor 100.0 2.1E-41 4.5E-46 342.5 25.2 199 96-335 5-225 (228)
160 TIGR01288 nodI ATP-binding ABC 100.0 2.1E-41 4.6E-46 356.7 26.3 205 422-630 2-224 (303)
161 cd03257 ABC_NikE_OppD_transpor 100.0 1.3E-41 2.8E-46 343.8 23.5 202 97-335 1-225 (228)
162 cd03265 ABC_DrrA DrrA is the A 100.0 2.3E-41 5E-46 340.4 24.8 198 425-626 1-217 (220)
163 PRK14250 phosphate ABC transpo 100.0 2.1E-41 4.5E-46 345.4 24.7 203 97-344 3-219 (241)
164 PRK13548 hmuV hemin importer A 100.0 2.4E-41 5.1E-46 348.5 25.3 207 97-344 2-228 (258)
165 cd03296 ABC_CysA_sulfate_impor 100.0 2.6E-41 5.7E-46 344.3 25.3 203 424-630 2-226 (239)
166 TIGR03005 ectoine_ehuA ectoine 100.0 2.3E-41 5E-46 347.4 24.7 208 98-345 1-235 (252)
167 PRK11308 dppF dipeptide transp 100.0 3.4E-41 7.3E-46 357.8 26.6 211 96-345 4-243 (327)
168 TIGR02769 nickel_nikE nickel i 100.0 2.7E-41 5.8E-46 349.4 25.0 209 97-344 2-238 (265)
169 TIGR01978 sufC FeS assembly AT 100.0 3.1E-41 6.8E-46 344.4 25.0 213 98-343 1-231 (243)
170 PRK09452 potA putrescine/sperm 100.0 3.7E-41 8.1E-46 362.5 26.8 207 421-631 11-235 (375)
171 PRK11247 ssuB aliphatic sulfon 100.0 3.2E-41 6.9E-46 346.7 25.0 200 422-625 10-218 (257)
172 PRK13636 cbiO cobalt transport 100.0 3.3E-41 7.2E-46 351.8 25.3 210 96-346 4-231 (283)
173 PRK13638 cbiO cobalt transport 100.0 2.7E-41 5.8E-46 350.6 24.5 208 97-345 1-224 (271)
174 PRK15112 antimicrobial peptide 100.0 3E-41 6.5E-46 349.4 24.7 211 96-345 3-238 (267)
175 PRK11000 maltose/maltodextrin 100.0 3.2E-41 7E-46 363.6 25.9 203 424-630 3-223 (369)
176 PRK14247 phosphate ABC transpo 100.0 4.6E-41 1E-45 344.7 25.8 211 97-345 3-233 (250)
177 PRK11701 phnK phosphonate C-P 100.0 5.7E-41 1.2E-45 345.7 26.6 211 96-345 5-240 (258)
178 cd03219 ABC_Mj1267_LivG_branch 100.0 3.3E-41 7.2E-46 342.7 24.3 202 425-630 1-232 (236)
179 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.6E-41 3.5E-46 351.7 22.1 206 99-345 26-249 (269)
180 PRK10851 sulfate/thiosulfate t 100.0 4.2E-41 9E-46 360.2 26.0 204 424-631 2-227 (353)
181 PRK14242 phosphate transporter 100.0 5.9E-41 1.3E-45 344.6 26.0 210 95-344 4-235 (253)
182 cd03293 ABC_NrtD_SsuB_transpor 100.0 4.5E-41 9.7E-46 338.3 24.6 193 425-620 1-214 (220)
183 TIGR02315 ABC_phnC phosphonate 100.0 2.9E-41 6.2E-46 344.7 23.4 201 424-628 1-233 (243)
184 PRK11300 livG leucine/isoleuci 100.0 3.9E-41 8.5E-46 346.2 24.6 222 97-344 5-241 (255)
185 TIGR03410 urea_trans_UrtE urea 100.0 2.9E-41 6.2E-46 341.9 23.2 204 98-344 1-219 (230)
186 PRK11831 putative ABC transpor 100.0 5.9E-41 1.3E-45 347.6 26.0 205 422-630 5-233 (269)
187 PRK11614 livF leucine/isoleuci 100.0 4E-41 8.7E-46 342.5 23.9 207 96-345 4-225 (237)
188 COG3840 ThiQ ABC-type thiamine 100.0 7.8E-42 1.7E-46 318.7 16.8 207 98-347 2-220 (231)
189 COG3840 ThiQ ABC-type thiamine 100.0 1.6E-41 3.4E-46 316.6 18.9 203 424-632 1-221 (231)
190 cd03256 ABC_PhnC_transporter A 100.0 4.6E-41 9.9E-46 342.7 24.2 200 425-628 1-232 (241)
191 TIGR03522 GldA_ABC_ATP gliding 100.0 7.5E-41 1.6E-45 352.1 26.5 203 424-630 2-221 (301)
192 PRK09536 btuD corrinoid ABC tr 100.0 4.5E-41 9.8E-46 363.9 25.4 203 423-629 2-227 (402)
193 cd03266 ABC_NatA_sodium_export 100.0 4.6E-41 1E-45 337.6 23.7 194 424-620 1-216 (218)
194 TIGR03258 PhnT 2-aminoethylpho 100.0 5.3E-41 1.2E-45 359.9 25.6 204 424-631 5-229 (362)
195 PRK13650 cbiO cobalt transport 100.0 5.4E-41 1.2E-45 349.6 25.0 207 97-345 4-228 (279)
196 cd03301 ABC_MalK_N The N-termi 100.0 5.4E-41 1.2E-45 335.9 24.0 193 425-620 1-211 (213)
197 PRK14268 phosphate ABC transpo 100.0 8.2E-41 1.8E-45 344.5 26.1 208 96-344 11-240 (258)
198 PRK13649 cbiO cobalt transport 100.0 5.2E-41 1.1E-45 350.1 24.8 207 98-344 3-232 (280)
199 KOG0058 Peptide exporter, ABC 100.0 1.3E-41 2.9E-46 375.2 21.5 249 57-347 429-692 (716)
200 PRK11231 fecE iron-dicitrate t 100.0 5.6E-41 1.2E-45 345.1 24.7 211 97-344 2-225 (255)
201 cd03258 ABC_MetN_methionine_tr 100.0 5.9E-41 1.3E-45 340.3 24.5 202 424-629 1-229 (233)
202 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 3.2E-41 7E-46 338.7 22.3 190 425-618 1-218 (218)
203 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.5E-41 7.6E-46 336.8 22.3 196 98-335 1-208 (211)
204 PRK09493 glnQ glutamine ABC tr 100.0 7.9E-41 1.7E-45 340.9 25.4 203 424-630 1-225 (240)
205 cd03268 ABC_BcrA_bacitracin_re 100.0 5.2E-41 1.1E-45 334.8 23.5 193 425-620 1-206 (208)
206 PRK13643 cbiO cobalt transport 100.0 5.8E-41 1.3E-45 350.8 24.8 205 424-630 1-233 (288)
207 PRK13652 cbiO cobalt transport 100.0 9E-41 1.9E-45 347.6 26.1 209 96-345 2-226 (277)
208 PRK13634 cbiO cobalt transport 100.0 5.8E-41 1.3E-45 351.1 24.8 203 425-629 3-234 (290)
209 PRK14267 phosphate ABC transpo 100.0 9.2E-41 2E-45 343.1 25.8 211 96-344 3-235 (253)
210 TIGR02673 FtsE cell division A 100.0 4.5E-41 9.7E-46 336.7 22.6 191 424-617 1-214 (214)
211 PRK11607 potG putrescine trans 100.0 9.6E-41 2.1E-45 359.8 26.8 206 421-630 16-239 (377)
212 PRK13645 cbiO cobalt transport 100.0 6.5E-41 1.4E-45 350.9 24.8 209 96-344 5-238 (289)
213 PRK11022 dppD dipeptide transp 100.0 9.4E-41 2E-45 354.4 26.3 210 97-345 3-242 (326)
214 PRK10575 iron-hydroxamate tran 100.0 4.6E-41 1E-45 347.7 23.4 212 96-344 10-235 (265)
215 PRK11248 tauB taurine transpor 100.0 7.8E-41 1.7E-45 343.9 24.9 194 424-620 1-211 (255)
216 PRK11153 metN DL-methionine tr 100.0 8.2E-41 1.8E-45 357.5 26.0 203 424-630 1-230 (343)
217 cd03235 ABC_Metallic_Cations A 100.0 2.8E-41 6E-46 338.1 20.9 192 426-618 1-210 (213)
218 PRK13637 cbiO cobalt transport 100.0 9.3E-41 2E-45 349.1 25.8 205 424-630 2-234 (287)
219 PRK15079 oligopeptide ABC tran 100.0 1E-40 2.2E-45 354.5 26.4 208 422-630 6-251 (331)
220 TIGR03873 F420-0_ABC_ATP propo 100.0 6.8E-41 1.5E-45 344.7 24.4 210 98-344 2-224 (256)
221 PRK14273 phosphate ABC transpo 100.0 1E-40 2.2E-45 343.1 25.6 209 96-344 6-236 (254)
222 PRK13631 cbiO cobalt transport 100.0 1.2E-40 2.5E-45 352.6 26.4 209 419-629 16-264 (320)
223 PRK10253 iron-enterobactin tra 100.0 7.3E-41 1.6E-45 346.2 24.2 212 96-344 6-231 (265)
224 PRK13644 cbiO cobalt transport 100.0 9.8E-41 2.1E-45 346.7 25.1 207 97-345 1-223 (274)
225 PRK11300 livG leucine/isoleuci 100.0 1.3E-40 2.8E-45 342.4 25.7 204 422-629 3-242 (255)
226 TIGR02769 nickel_nikE nickel i 100.0 8.2E-41 1.8E-45 345.8 24.4 211 424-635 2-245 (265)
227 PRK00635 excinuclease ABC subu 100.0 2.6E-39 5.7E-44 392.7 41.3 315 97-470 600-981 (1809)
228 TIGR02323 CP_lyasePhnK phospho 100.0 1.5E-40 3.3E-45 341.5 26.2 210 97-345 3-237 (253)
229 cd03269 ABC_putative_ATPase Th 100.0 9.1E-41 2E-45 333.6 23.8 193 425-620 1-208 (210)
230 PRK09984 phosphonate/organopho 100.0 8.3E-41 1.8E-45 345.2 24.1 216 96-344 3-240 (262)
231 PRK13641 cbiO cobalt transport 100.0 1.2E-40 2.6E-45 348.3 25.6 205 424-630 2-234 (287)
232 PRK14241 phosphate transporter 100.0 1.6E-40 3.6E-45 342.3 26.1 210 97-345 4-241 (258)
233 PRK10744 pstB phosphate transp 100.0 1.5E-40 3.2E-45 343.0 25.8 210 95-344 11-242 (260)
234 PRK10771 thiQ thiamine transpo 100.0 1.1E-40 2.3E-45 338.2 24.3 207 97-346 1-219 (232)
235 PRK13651 cobalt transporter AT 100.0 1.1E-40 2.3E-45 350.8 25.2 205 424-630 2-254 (305)
236 PRK14256 phosphate ABC transpo 100.0 1.8E-40 3.8E-45 340.9 25.9 210 96-344 3-234 (252)
237 cd03257 ABC_NikE_OppD_transpor 100.0 1.1E-40 2.3E-45 337.1 23.9 197 424-620 1-226 (228)
238 PRK14235 phosphate transporter 100.0 2.2E-40 4.7E-45 343.0 26.7 212 94-344 16-249 (267)
239 TIGR03411 urea_trans_UrtD urea 100.0 1.6E-40 3.4E-45 339.1 25.2 202 424-629 2-230 (242)
240 PRK13639 cbiO cobalt transport 100.0 1.7E-40 3.7E-45 345.1 25.9 208 97-345 1-225 (275)
241 cd03218 ABC_YhbG The ABC trans 100.0 1.3E-40 2.9E-45 337.5 24.3 201 425-629 1-221 (232)
242 PRK09473 oppD oligopeptide tra 100.0 2E-40 4.4E-45 352.2 26.8 213 95-346 10-251 (330)
243 TIGR03740 galliderm_ABC gallid 100.0 1.3E-40 2.8E-45 335.6 23.9 199 98-341 1-208 (223)
244 PRK13635 cbiO cobalt transport 100.0 1.6E-40 3.4E-45 346.0 25.3 208 96-345 4-228 (279)
245 PRK11308 dppF dipeptide transp 100.0 2.1E-40 4.6E-45 351.6 26.7 208 422-630 3-244 (327)
246 PRK10619 histidine/lysine/argi 100.0 2.1E-40 4.5E-45 341.3 25.9 206 422-630 3-241 (257)
247 PRK14248 phosphate ABC transpo 100.0 2.1E-40 4.6E-45 343.3 26.1 210 95-344 19-250 (268)
248 PRK11147 ABC transporter ATPas 100.0 1.2E-40 2.7E-45 383.7 26.9 211 94-346 316-528 (635)
249 PRK13646 cbiO cobalt transport 100.0 1.4E-40 3.1E-45 347.6 24.8 205 424-630 2-235 (286)
250 PRK13647 cbiO cobalt transport 100.0 1.9E-40 4.1E-45 344.6 25.3 201 424-627 4-224 (274)
251 PRK11701 phnK phosphonate C-P 100.0 2.2E-40 4.7E-45 341.3 25.5 207 423-630 5-241 (258)
252 PRK10575 iron-hydroxamate tran 100.0 1.9E-40 4.2E-45 343.1 25.0 205 421-629 8-236 (265)
253 cd03224 ABC_TM1139_LivF_branch 100.0 1.4E-40 2.9E-45 335.0 23.2 200 425-628 1-219 (222)
254 cd03262 ABC_HisP_GlnQ_permease 100.0 1.3E-40 2.7E-45 333.2 22.6 191 425-618 1-213 (213)
255 cd03263 ABC_subfamily_A The AB 100.0 1.5E-40 3.2E-45 334.3 23.3 199 425-627 1-218 (220)
256 PRK14245 phosphate ABC transpo 100.0 2.9E-40 6.3E-45 338.8 25.9 210 96-345 2-233 (250)
257 PRK10908 cell division protein 100.0 1.9E-40 4.2E-45 334.1 24.1 194 424-620 1-217 (222)
258 PRK15112 antimicrobial peptide 100.0 2E-40 4.4E-45 343.2 24.8 208 422-630 2-239 (267)
259 COG4152 ABC-type uncharacteriz 100.0 3.9E-41 8.5E-46 327.4 18.1 207 97-344 2-217 (300)
260 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.2E-40 4.8E-45 338.1 24.7 203 425-630 1-225 (242)
261 PRK10247 putative ABC transpor 100.0 1.1E-40 2.4E-45 336.6 22.2 192 96-330 6-211 (225)
262 PRK15093 antimicrobial peptide 100.0 2.8E-40 6.1E-45 351.7 26.4 216 96-345 2-247 (330)
263 cd03300 ABC_PotA_N PotA is an 100.0 2.6E-40 5.6E-45 335.5 24.9 206 98-344 1-218 (232)
264 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2.8E-40 6E-45 336.1 25.1 203 424-631 1-222 (236)
265 PRK11264 putative amino-acid A 100.0 2.4E-40 5.3E-45 339.4 24.8 203 424-630 3-233 (250)
266 cd03292 ABC_FtsE_transporter F 100.0 1.8E-40 3.8E-45 332.3 23.0 191 425-618 1-214 (214)
267 cd03260 ABC_PstB_phosphate_tra 100.0 1.6E-40 3.4E-45 335.8 22.8 197 425-626 1-225 (227)
268 PRK14250 phosphate ABC transpo 100.0 3.1E-40 6.8E-45 336.8 24.9 203 424-630 3-221 (241)
269 PRK11144 modC molybdate transp 100.0 2.7E-40 5.9E-45 354.6 25.6 199 97-345 1-217 (352)
270 cd03299 ABC_ModC_like Archeal 100.0 3.3E-40 7.1E-45 335.4 24.8 206 98-345 1-218 (235)
271 cd03264 ABC_drug_resistance_li 100.0 2.3E-40 5E-45 330.9 23.4 192 425-620 1-209 (211)
272 PRK14239 phosphate transporter 100.0 4.2E-40 9E-45 338.0 25.8 210 96-345 4-235 (252)
273 PRK11124 artP arginine transpo 100.0 2.9E-40 6.2E-45 337.2 24.5 202 424-629 2-229 (242)
274 PRK14274 phosphate ABC transpo 100.0 4E-40 8.6E-45 339.6 25.7 211 95-345 10-242 (259)
275 PRK13543 cytochrome c biogenes 100.0 1.9E-40 4E-45 332.4 22.5 193 96-331 10-212 (214)
276 PRK14251 phosphate ABC transpo 100.0 3.7E-40 8E-45 338.2 25.2 208 97-344 4-233 (251)
277 PRK14240 phosphate transporter 100.0 4.5E-40 9.8E-45 337.4 25.7 208 97-344 3-232 (250)
278 COG0488 Uup ATPase components 100.0 5.5E-41 1.2E-45 372.3 20.3 211 423-638 2-248 (530)
279 cd03225 ABC_cobalt_CbiO_domain 100.0 2.1E-40 4.6E-45 331.1 22.6 190 426-617 1-211 (211)
280 TIGR03608 L_ocin_972_ABC putat 100.0 1.5E-40 3.2E-45 330.9 21.4 189 100-329 1-206 (206)
281 PRK13638 cbiO cobalt transport 100.0 2.1E-40 4.6E-45 343.8 23.4 204 424-630 1-225 (271)
282 TIGR01188 drrA daunorubicin re 100.0 2.4E-40 5.2E-45 348.5 24.1 196 432-631 1-214 (302)
283 PRK14271 phosphate ABC transpo 100.0 6.3E-40 1.4E-44 340.9 26.7 211 95-345 19-250 (276)
284 TIGR02211 LolD_lipo_ex lipopro 100.0 2.7E-40 5.8E-45 332.7 23.2 192 424-619 1-220 (221)
285 PRK14269 phosphate ABC transpo 100.0 5.1E-40 1.1E-44 336.2 25.6 209 97-344 2-228 (246)
286 PRK15093 antimicrobial peptide 100.0 4.5E-40 9.7E-45 350.2 26.0 206 424-630 3-248 (330)
287 PRK10895 lipopolysaccharide AB 100.0 4.2E-40 9.1E-45 335.8 24.6 203 424-630 3-226 (241)
288 TIGR00968 3a0106s01 sulfate AB 100.0 4.3E-40 9.4E-45 334.9 24.6 206 98-344 1-218 (237)
289 PRK13632 cbiO cobalt transport 100.0 3E-40 6.5E-45 342.7 23.8 207 96-344 6-229 (271)
290 PRK14272 phosphate ABC transpo 100.0 5.7E-40 1.2E-44 337.0 25.6 210 97-345 4-235 (252)
291 TIGR00972 3a0107s01c2 phosphat 100.0 6.3E-40 1.4E-44 335.8 25.8 203 424-630 1-232 (247)
292 PRK11629 lolD lipoprotein tran 100.0 5.9E-40 1.3E-44 333.1 25.3 194 423-620 4-225 (233)
293 TIGR03415 ABC_choXWV_ATP choli 100.0 2.1E-40 4.5E-45 356.1 23.2 204 101-345 28-253 (382)
294 TIGR03005 ectoine_ehuA ectoine 100.0 4.9E-40 1.1E-44 337.6 24.9 203 425-631 1-237 (252)
295 PRK13636 cbiO cobalt transport 100.0 5.7E-40 1.2E-44 342.5 25.7 205 423-630 4-231 (283)
296 PRK14254 phosphate ABC transpo 100.0 1E-39 2.2E-44 340.8 27.5 210 93-344 35-267 (285)
297 TIGR02323 CP_lyasePhnK phospho 100.0 5.7E-40 1.2E-44 337.2 25.2 207 423-630 2-238 (253)
298 PRK13548 hmuV hemin importer A 100.0 5.6E-40 1.2E-44 338.3 25.2 203 424-630 2-230 (258)
299 PRK14237 phosphate transporter 100.0 7.2E-40 1.6E-44 339.1 26.2 210 95-344 18-249 (267)
300 TIGR01277 thiQ thiamine ABC tr 100.0 3.4E-40 7.4E-45 330.2 23.0 196 98-335 1-208 (213)
301 PRK14270 phosphate ABC transpo 100.0 7E-40 1.5E-44 336.2 25.6 209 96-344 3-233 (251)
302 TIGR01978 sufC FeS assembly AT 100.0 5E-40 1.1E-44 335.4 24.5 202 425-629 1-233 (243)
303 PRK09544 znuC high-affinity zi 100.0 4.2E-40 9.1E-45 337.5 24.0 199 96-344 3-207 (251)
304 PRK10584 putative ABC transpor 100.0 6.7E-40 1.5E-44 331.5 25.2 194 423-620 5-226 (228)
305 PRK11231 fecE iron-dicitrate t 100.0 5.1E-40 1.1E-44 338.0 24.6 202 424-629 2-226 (255)
306 PRK14262 phosphate ABC transpo 100.0 7.2E-40 1.6E-44 335.9 25.6 208 97-344 3-232 (250)
307 TIGR02142 modC_ABC molybdenum 100.0 5.1E-40 1.1E-44 353.0 25.5 198 102-344 4-219 (354)
308 cd03297 ABC_ModC_molybdenum_tr 100.0 4E-40 8.7E-45 329.9 23.1 189 102-335 5-211 (214)
309 PRK11022 dppD dipeptide transp 100.0 6E-40 1.3E-44 348.2 25.6 206 424-630 3-243 (326)
310 PRK13640 cbiO cobalt transport 100.0 5.7E-40 1.2E-44 342.4 25.0 208 96-345 4-231 (282)
311 PRK10419 nikE nickel transport 100.0 6.7E-40 1.4E-44 339.5 25.2 208 97-343 3-238 (268)
312 PRK14253 phosphate ABC transpo 100.0 7.1E-40 1.5E-44 335.8 24.9 208 97-344 3-231 (249)
313 PRK13649 cbiO cobalt transport 100.0 7.1E-40 1.5E-44 341.5 25.2 205 424-630 2-234 (280)
314 COG0410 LivF ABC-type branched 100.0 5.1E-40 1.1E-44 319.9 22.4 210 96-346 2-226 (237)
315 PRK09473 oppD oligopeptide tra 100.0 1E-39 2.2E-44 346.9 26.8 210 420-630 8-251 (330)
316 TIGR03410 urea_trans_UrtE urea 100.0 4.9E-40 1.1E-44 332.9 23.2 201 425-628 1-219 (230)
317 PRK14249 phosphate ABC transpo 100.0 1E-39 2.2E-44 335.1 25.8 209 96-344 3-233 (251)
318 PRK13648 cbiO cobalt transport 100.0 5.8E-40 1.3E-44 340.2 24.2 208 96-345 6-230 (269)
319 PRK13650 cbiO cobalt transport 100.0 5.4E-40 1.2E-44 342.0 24.0 204 424-631 4-230 (279)
320 PRK13633 cobalt transporter AT 100.0 5.6E-40 1.2E-44 342.2 24.1 208 96-345 3-232 (280)
321 PRK09984 phosphonate/organopho 100.0 8.5E-40 1.9E-44 337.7 25.1 202 423-628 3-240 (262)
322 PRK10253 iron-enterobactin tra 100.0 8.4E-40 1.8E-44 338.3 24.9 204 422-629 5-232 (265)
323 TIGR02324 CP_lyasePhnL phospho 100.0 7.3E-40 1.6E-44 330.3 23.8 195 97-330 1-223 (224)
324 PRK11819 putative ABC transpor 100.0 1.1E-39 2.4E-44 370.7 28.3 213 95-349 322-536 (556)
325 PRK13652 cbiO cobalt transport 100.0 9.5E-40 2.1E-44 339.9 25.3 205 423-630 2-227 (277)
326 PRK10636 putative ABC transpor 100.0 6.2E-40 1.4E-44 377.3 26.3 207 94-346 309-517 (638)
327 PRK10771 thiQ thiamine transpo 100.0 6.7E-40 1.4E-44 332.4 23.4 202 424-631 1-220 (232)
328 PRK14259 phosphate ABC transpo 100.0 1.1E-39 2.4E-44 338.0 25.4 196 95-331 11-228 (269)
329 PRK13538 cytochrome c biogenes 100.0 5.3E-40 1.2E-44 326.7 22.0 190 97-329 1-202 (204)
330 PRK13645 cbiO cobalt transport 100.0 9.5E-40 2.1E-44 342.0 25.0 205 423-629 5-239 (289)
331 PRK10744 pstB phosphate transp 100.0 1.8E-39 3.9E-44 334.9 26.7 205 422-630 11-244 (260)
332 PRK11614 livF leucine/isoleuci 100.0 8.2E-40 1.8E-44 332.8 23.8 203 423-629 4-225 (237)
333 PRK14242 phosphate transporter 100.0 1.6E-39 3.4E-44 334.0 26.2 205 422-630 4-237 (253)
334 TIGR01186 proV glycine betaine 100.0 6.1E-40 1.3E-44 350.9 24.0 196 432-631 1-220 (363)
335 PRK10070 glycine betaine trans 100.0 8.3E-40 1.8E-44 353.9 25.3 202 425-630 29-254 (400)
336 cd03294 ABC_Pro_Gly_Bertaine T 100.0 4.9E-40 1.1E-44 340.6 22.5 201 426-630 26-250 (269)
337 TIGR03740 galliderm_ABC gallid 100.0 1E-39 2.2E-44 329.1 24.2 198 425-626 1-209 (223)
338 cd03298 ABC_ThiQ_thiamine_tran 100.0 8.7E-40 1.9E-44 326.8 23.5 191 425-620 1-209 (211)
339 PRK14275 phosphate ABC transpo 100.0 2E-39 4.4E-44 338.8 27.1 211 94-344 36-268 (286)
340 TIGR02982 heterocyst_DevA ABC 100.0 9.1E-40 2E-44 328.8 23.4 197 98-334 2-219 (220)
341 PRK13639 cbiO cobalt transport 100.0 1.2E-39 2.5E-44 338.9 24.9 204 424-630 1-226 (275)
342 COG1123 ATPase components of v 100.0 6.4E-40 1.4E-44 357.4 23.9 212 94-344 277-517 (539)
343 PRK14273 phosphate ABC transpo 100.0 1.8E-39 3.8E-44 333.8 25.9 205 422-630 5-238 (254)
344 PRK10419 nikE nickel transport 100.0 9.7E-40 2.1E-44 338.3 24.1 211 424-635 3-246 (268)
345 PRK14238 phosphate transporter 100.0 1.1E-39 2.4E-44 338.4 24.6 210 95-344 22-253 (271)
346 PRK13547 hmuV hemin importer A 100.0 6.9E-40 1.5E-44 339.5 23.0 211 97-344 1-242 (272)
347 COG4181 Predicted ABC-type tra 100.0 3.5E-40 7.5E-45 304.5 18.2 198 97-335 6-225 (228)
348 PRK13642 cbiO cobalt transport 100.0 1.1E-39 2.5E-44 339.3 24.4 207 97-345 4-228 (277)
349 PRK14268 phosphate ABC transpo 100.0 1.7E-39 3.6E-44 334.8 25.2 205 422-630 10-242 (258)
350 COG1137 YhbG ABC-type (unclass 100.0 6.3E-41 1.4E-45 317.2 13.3 206 423-632 3-230 (243)
351 KOG0058 Peptide exporter, ABC 100.0 2.3E-40 5E-45 365.4 19.8 207 421-632 462-693 (716)
352 COG4598 HisP ABC-type histidin 100.0 1.2E-40 2.5E-45 309.7 14.6 211 96-346 5-241 (256)
353 TIGR03873 F420-0_ABC_ATP propo 100.0 1.4E-39 3.1E-44 334.9 24.3 201 425-629 2-225 (256)
354 PRK14267 phosphate ABC transpo 100.0 2.1E-39 4.6E-44 333.0 25.5 205 423-630 3-237 (253)
355 PRK10418 nikD nickel transport 100.0 2.1E-39 4.6E-44 333.2 25.6 206 97-345 4-229 (254)
356 cd03267 ABC_NatA_like Similar 100.0 8.5E-40 1.8E-44 332.5 22.2 191 105-335 29-233 (236)
357 PRK14247 phosphate ABC transpo 100.0 2.5E-39 5.5E-44 331.9 25.9 204 424-630 3-234 (250)
358 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.7E-39 3.8E-44 369.0 27.3 211 95-347 320-532 (552)
359 PRK11144 modC molybdate transp 100.0 1.6E-39 3.5E-44 348.7 25.4 201 424-631 1-219 (352)
360 PRK14260 phosphate ABC transpo 100.0 2.3E-39 5E-44 333.9 25.6 210 96-345 6-242 (259)
361 PRK09580 sufC cysteine desulfu 100.0 1.7E-39 3.6E-44 332.7 24.4 213 97-342 1-231 (248)
362 PRK14246 phosphate ABC transpo 100.0 1.7E-39 3.7E-44 334.3 24.6 212 95-345 8-240 (257)
363 cd03231 ABC_CcmA_heme_exporter 100.0 7.2E-40 1.6E-44 325.0 20.8 186 98-329 1-198 (201)
364 PRK14236 phosphate transporter 100.0 2.9E-39 6.2E-44 335.5 26.1 211 95-345 23-255 (272)
365 COG0444 DppD ABC-type dipeptid 100.0 2.1E-39 4.5E-44 331.0 24.4 210 98-346 2-243 (316)
366 PRK15064 ABC transporter ATP-b 100.0 1.9E-39 4.1E-44 367.3 26.6 206 96-346 318-525 (530)
367 COG4175 ProV ABC-type proline/ 100.0 4E-40 8.8E-45 330.9 18.6 211 97-348 4-256 (386)
368 PRK14244 phosphate ABC transpo 100.0 2.9E-39 6.2E-44 331.7 25.3 208 98-344 6-235 (251)
369 COG0410 LivF ABC-type branched 100.0 1.8E-39 3.9E-44 316.0 22.5 206 423-631 2-227 (237)
370 PRK14255 phosphate ABC transpo 100.0 3.2E-39 6.9E-44 331.5 25.6 207 96-342 4-232 (252)
371 PRK14248 phosphate ABC transpo 100.0 2.9E-39 6.4E-44 334.8 25.5 207 420-630 17-252 (268)
372 PRK13644 cbiO cobalt transport 100.0 2.3E-39 4.9E-44 336.5 24.6 203 424-630 1-224 (274)
373 PRK14241 phosphate transporter 100.0 5E-39 1.1E-43 331.2 26.9 204 424-630 4-242 (258)
374 PRK14245 phosphate ABC transpo 100.0 4.1E-39 8.9E-44 330.3 26.0 204 423-630 2-234 (250)
375 COG2274 SunT ABC-type bacterio 100.0 9.3E-40 2E-44 373.5 23.4 215 95-347 469-697 (709)
376 PRK10261 glutathione transport 100.0 2.2E-39 4.7E-44 372.4 26.5 212 95-345 311-552 (623)
377 PRK14235 phosphate transporter 100.0 3.4E-39 7.3E-44 334.1 25.4 206 421-630 16-251 (267)
378 COG4525 TauB ABC-type taurine 100.0 5E-40 1.1E-44 309.6 17.3 197 96-332 2-209 (259)
379 PRK14256 phosphate ABC transpo 100.0 6.2E-39 1.3E-43 329.4 26.5 205 423-630 3-236 (252)
380 PRK14239 phosphate transporter 100.0 4.4E-39 9.6E-44 330.4 25.3 205 423-631 4-237 (252)
381 cd03245 ABCC_bacteriocin_expor 100.0 1.5E-39 3.3E-44 327.0 21.4 200 97-335 2-217 (220)
382 PRK14261 phosphate ABC transpo 100.0 5.1E-39 1.1E-43 330.2 25.6 209 96-344 5-235 (253)
383 PRK14258 phosphate ABC transpo 100.0 5.6E-39 1.2E-43 331.4 26.0 210 96-345 6-244 (261)
384 CHL00131 ycf16 sulfate ABC tra 100.0 3.1E-39 6.8E-44 331.5 24.0 214 96-342 6-237 (252)
385 PRK13543 cytochrome c biogenes 100.0 3.3E-39 7.2E-44 323.4 23.5 192 421-615 8-212 (214)
386 PRK13635 cbiO cobalt transport 100.0 3.6E-39 7.8E-44 335.8 24.6 203 423-629 4-228 (279)
387 PRK14257 phosphate ABC transpo 100.0 4.6E-39 1E-43 341.5 25.8 211 95-345 78-312 (329)
388 PRK14243 phosphate transporter 100.0 4.5E-39 9.7E-44 332.6 25.0 208 96-345 9-247 (264)
389 COG2274 SunT ABC-type bacterio 100.0 5.3E-39 1.2E-43 367.3 28.1 206 421-631 468-697 (709)
390 PRK15056 manganese/iron transp 100.0 2.6E-39 5.7E-44 335.8 23.1 210 97-344 6-228 (272)
391 cd03252 ABCC_Hemolysin The ABC 100.0 1.5E-39 3.3E-44 330.8 20.9 208 98-345 1-224 (237)
392 cd03300 ABC_PotA_N PotA is an 100.0 6E-39 1.3E-43 325.5 25.0 202 425-630 1-220 (232)
393 PRK14259 phosphate ABC transpo 100.0 6.3E-39 1.4E-43 332.3 25.6 207 421-631 10-254 (269)
394 PRK13633 cobalt transporter AT 100.0 3.3E-39 7.2E-44 336.3 23.6 205 423-631 3-234 (280)
395 PRK10418 nikD nickel transport 100.0 5.4E-39 1.2E-43 330.2 24.8 206 424-631 4-231 (254)
396 cd03251 ABCC_MsbA MsbA is an e 100.0 1.6E-39 3.4E-44 330.0 20.5 207 98-344 1-223 (234)
397 PRK09544 znuC high-affinity zi 100.0 4.7E-39 1E-43 329.7 24.1 200 423-629 3-208 (251)
398 PRK14251 phosphate ABC transpo 100.0 7.9E-39 1.7E-43 328.4 25.6 203 423-629 3-234 (251)
399 PRK14270 phosphate ABC transpo 100.0 8E-39 1.7E-43 328.4 25.5 205 422-630 2-235 (251)
400 PRK14274 phosphate ABC transpo 100.0 9.5E-39 2.1E-43 329.3 26.1 207 421-631 9-244 (259)
401 PRK13538 cytochrome c biogenes 100.0 3.9E-39 8.6E-44 320.4 22.3 187 424-613 1-202 (204)
402 PRK14265 phosphate ABC transpo 100.0 1.1E-38 2.4E-43 331.4 26.6 209 95-345 18-257 (274)
403 PRK14254 phosphate ABC transpo 100.0 1.4E-38 3E-43 332.3 27.4 207 420-630 35-269 (285)
404 cd03297 ABC_ModC_molybdenum_tr 100.0 5.3E-39 1.1E-43 321.8 23.3 189 425-620 2-212 (214)
405 PRK13547 hmuV hemin importer A 100.0 6.5E-39 1.4E-43 332.3 24.7 202 424-629 1-243 (272)
406 cd03254 ABCC_Glucan_exporter_l 100.0 1.9E-39 4.2E-44 328.3 20.3 209 97-345 2-225 (229)
407 PRK14269 phosphate ABC transpo 100.0 7.5E-39 1.6E-43 327.6 24.8 203 424-630 2-230 (246)
408 cd03230 ABC_DR_subfamily_A Thi 100.0 4E-39 8.6E-44 312.1 21.3 160 98-333 1-172 (173)
409 COG4152 ABC-type uncharacteriz 100.0 1.3E-39 2.8E-44 316.8 17.8 204 424-631 2-220 (300)
410 PRK14252 phosphate ABC transpo 100.0 1.4E-38 2.9E-43 329.3 26.5 210 95-344 14-247 (265)
411 PRK14266 phosphate ABC transpo 100.0 1.1E-38 2.3E-43 327.3 25.3 208 97-344 3-232 (250)
412 PRK11174 cysteine/glutathione 100.0 5.1E-39 1.1E-43 368.5 25.5 210 97-347 349-573 (588)
413 TIGR01277 thiQ thiamine ABC tr 100.0 9E-39 2E-43 320.0 23.9 191 425-620 1-209 (213)
414 PRK10247 putative ABC transpor 100.0 5.1E-39 1.1E-43 324.5 22.3 194 422-619 5-218 (225)
415 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 3.9E-39 8.4E-44 325.1 21.3 191 425-620 23-222 (224)
416 PRK15439 autoinducer 2 ABC tra 100.0 7.8E-39 1.7E-43 360.4 26.1 204 422-629 9-228 (510)
417 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 3.9E-39 8.6E-44 325.0 21.3 196 98-335 23-221 (224)
418 KOG0057 Mitochondrial Fe/S clu 100.0 2.5E-39 5.5E-44 346.0 20.9 201 424-630 351-574 (591)
419 TIGR03269 met_CoM_red_A2 methy 100.0 7E-39 1.5E-43 361.9 25.8 209 95-344 277-515 (520)
420 PRK13632 cbiO cobalt transport 100.0 8E-39 1.7E-43 332.0 24.1 204 422-629 5-230 (271)
421 TIGR00968 3a0106s01 sulfate AB 100.0 1.2E-38 2.7E-43 324.2 25.1 201 425-629 1-219 (237)
422 cd03223 ABCD_peroxisomal_ALDP 100.0 5.7E-39 1.2E-43 308.9 21.3 163 98-333 1-164 (166)
423 PRK15056 manganese/iron transp 100.0 7.8E-39 1.7E-43 332.3 23.7 202 424-628 6-228 (272)
424 TIGR02142 modC_ABC molybdenum 100.0 1E-38 2.2E-43 342.9 25.4 197 429-631 4-222 (354)
425 PRK14238 phosphate transporter 100.0 1.3E-38 2.8E-43 330.3 25.3 208 420-631 20-256 (271)
426 PRK14275 phosphate ABC transpo 100.0 2.6E-38 5.7E-43 330.5 27.7 207 420-630 35-270 (286)
427 PRK14240 phosphate transporter 100.0 1.5E-38 3.1E-43 326.2 25.3 203 424-630 3-234 (250)
428 cd03299 ABC_ModC_like Archeal 100.0 1.5E-38 3.2E-43 323.3 25.0 201 425-630 1-219 (235)
429 PRK14237 phosphate transporter 100.0 2E-38 4.3E-43 328.3 26.3 205 422-630 18-251 (267)
430 PRK14272 phosphate ABC transpo 100.0 1.9E-38 4.2E-43 325.6 26.0 204 424-630 4-236 (252)
431 PRK14244 phosphate ABC transpo 100.0 1.3E-38 2.8E-43 326.8 24.7 217 424-647 5-251 (251)
432 cd03234 ABCG_White The White s 100.0 6.8E-39 1.5E-43 323.8 22.2 202 97-335 3-223 (226)
433 TIGR01184 ntrCD nitrate transp 100.0 3.9E-39 8.4E-44 326.4 20.5 189 113-340 1-198 (230)
434 cd03229 ABC_Class3 This class 100.0 5.4E-39 1.2E-43 312.6 20.6 162 98-333 1-178 (178)
435 COG4604 CeuD ABC-type enteroch 100.0 6.1E-40 1.3E-44 309.6 13.4 205 424-632 1-227 (252)
436 cd03248 ABCC_TAP TAP, the Tran 100.0 2.4E-39 5.2E-44 327.0 18.7 200 95-333 9-225 (226)
437 KOG0055 Multidrug/pheromone ex 100.0 3.4E-39 7.4E-44 374.3 22.5 247 57-347 949-1214(1228)
438 COG4175 ProV ABC-type proline/ 100.0 3.2E-39 6.9E-44 324.4 19.1 209 424-636 4-260 (386)
439 PRK14271 phosphate ABC transpo 100.0 3.1E-38 6.8E-43 328.2 27.3 206 422-631 19-252 (276)
440 PRK13640 cbiO cobalt transport 100.0 1.6E-38 3.4E-43 331.6 25.1 205 422-630 3-232 (282)
441 COG4598 HisP ABC-type histidin 100.0 1.4E-39 3.1E-44 302.4 15.3 204 423-630 5-241 (256)
442 COG0444 DppD ABC-type dipeptid 100.0 7.3E-39 1.6E-43 327.0 21.6 214 424-638 1-252 (316)
443 cd03245 ABCC_bacteriocin_expor 100.0 1E-38 2.2E-43 321.0 22.3 191 425-620 3-218 (220)
444 CHL00131 ycf16 sulfate ABC tra 100.0 2.2E-38 4.8E-43 325.2 25.2 204 422-626 5-237 (252)
445 COG4525 TauB ABC-type taurine 100.0 3E-39 6.6E-44 304.3 17.1 194 424-620 3-215 (259)
446 TIGR01189 ccmA heme ABC export 100.0 7.3E-39 1.6E-43 317.0 20.8 185 98-328 1-197 (198)
447 PRK09700 D-allose transporter 100.0 8.2E-39 1.8E-43 360.6 23.9 202 423-628 4-232 (510)
448 PRK14262 phosphate ABC transpo 100.0 2.5E-38 5.4E-43 324.5 25.4 203 424-630 3-234 (250)
449 PRK14257 phosphate ABC transpo 100.0 2.6E-38 5.7E-43 335.7 26.3 209 418-630 74-313 (329)
450 PRK13648 cbiO cobalt transport 100.0 1.8E-38 3.9E-43 329.0 24.3 205 422-630 5-231 (269)
451 cd03250 ABCC_MRP_domain1 Domai 100.0 1.3E-38 2.7E-43 316.7 21.9 195 98-333 1-204 (204)
452 PRK14249 phosphate ABC transpo 100.0 3.6E-38 7.8E-43 323.6 25.9 203 423-629 3-234 (251)
453 PRK14264 phosphate ABC transpo 100.0 3.6E-38 7.7E-43 332.3 26.5 224 94-345 42-288 (305)
454 PRK13539 cytochrome c biogenes 100.0 1E-38 2.2E-43 318.2 21.0 189 97-331 2-200 (207)
455 cd03231 ABC_CcmA_heme_exporter 100.0 1.4E-38 2.9E-43 315.8 21.9 186 425-613 1-198 (201)
456 PRK14255 phosphate ABC transpo 100.0 4.4E-38 9.5E-43 323.1 26.3 205 422-630 3-236 (252)
457 PRK13540 cytochrome c biogenes 100.0 1.1E-38 2.5E-43 316.1 21.1 184 98-327 2-197 (200)
458 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 7.1E-39 1.5E-43 326.1 20.2 207 98-344 1-224 (238)
459 cd03252 ABCC_Hemolysin The ABC 100.0 1.7E-38 3.7E-43 323.1 22.9 201 425-631 1-226 (237)
460 PRK13642 cbiO cobalt transport 100.0 3E-38 6.4E-43 328.7 25.2 203 424-630 4-229 (277)
461 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.3E-38 2.9E-43 329.8 22.4 198 98-346 3-225 (275)
462 PRK14236 phosphate transporter 100.0 4.4E-38 9.6E-43 326.6 26.3 206 421-630 22-256 (272)
463 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.1E-38 2.3E-43 371.8 24.3 212 96-346 450-673 (686)
464 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 9E-39 2E-43 373.9 23.7 213 96-346 476-700 (710)
465 PRK10762 D-ribose transporter 100.0 1.3E-38 2.9E-43 358.0 23.8 200 423-626 3-226 (501)
466 cd03267 ABC_NatA_like Similar 100.0 2.1E-38 4.6E-43 322.3 22.7 186 432-619 29-233 (236)
467 PRK14258 phosphate ABC transpo 100.0 4.7E-38 1E-42 324.5 25.6 203 424-630 7-245 (261)
468 PRK14265 phosphate ABC transpo 100.0 5.3E-38 1.1E-42 326.3 26.1 207 421-631 17-259 (274)
469 PRK15134 microcin C ABC transp 100.0 1.5E-38 3.3E-43 359.8 24.0 212 95-345 273-514 (529)
470 cd03251 ABCC_MsbA MsbA is an e 100.0 2.4E-38 5.2E-43 321.3 23.0 201 425-631 1-226 (234)
471 TIGR03415 ABC_choXWV_ATP choli 100.0 1.3E-38 2.8E-43 342.2 22.1 199 429-631 29-255 (382)
472 TIGR03608 L_ocin_972_ABC putat 100.0 1.7E-38 3.8E-43 316.0 21.2 183 427-613 1-206 (206)
473 COG4988 CydD ABC-type transpor 100.0 2.3E-38 5.1E-43 343.7 23.9 210 98-347 321-544 (559)
474 COG4559 ABC-type hemin transpo 100.0 1.1E-38 2.5E-43 304.5 18.8 204 424-631 1-231 (259)
475 PRK14253 phosphate ABC transpo 100.0 4.1E-38 8.8E-43 322.7 24.5 202 424-629 3-232 (249)
476 PRK14243 phosphate transporter 100.0 4.4E-38 9.5E-43 325.2 24.9 204 423-630 9-248 (264)
477 PRK14263 phosphate ABC transpo 100.0 7.5E-38 1.6E-42 322.8 26.5 209 95-345 6-244 (261)
478 TIGR00958 3a01208 Conjugate Tr 100.0 2.5E-38 5.3E-43 369.3 25.6 213 96-346 477-702 (711)
479 cd03247 ABCC_cytochrome_bd The 100.0 2E-38 4.4E-43 308.5 20.7 162 98-335 1-175 (178)
480 PRK13545 tagH teichoic acids e 100.0 8E-38 1.7E-42 342.2 27.7 212 96-351 20-237 (549)
481 cd03254 ABCC_Glucan_exporter_l 100.0 3.2E-38 7E-43 319.3 23.0 201 425-630 3-226 (229)
482 cd03244 ABCC_MRP_domain2 Domai 100.0 2.2E-38 4.9E-43 318.8 21.5 200 98-335 3-216 (221)
483 cd03253 ABCC_ATM1_transporter 100.0 2.6E-38 5.5E-43 321.5 22.2 207 98-344 1-222 (236)
484 TIGR02982 heterocyst_DevA ABC 100.0 4.7E-38 1E-42 316.3 23.8 190 425-618 2-219 (220)
485 PRK14260 phosphate ABC transpo 100.0 8.2E-38 1.8E-42 322.4 25.9 203 424-630 7-243 (259)
486 PRK13549 xylose transporter AT 100.0 2.7E-38 5.9E-43 355.9 24.2 200 423-626 4-228 (506)
487 cd03214 ABC_Iron-Siderophores_ 100.0 2.3E-38 4.9E-43 308.8 20.3 173 426-619 1-177 (180)
488 PRK13546 teichoic acids export 100.0 1.7E-37 3.8E-42 320.1 28.0 205 98-346 5-232 (264)
489 TIGR02770 nickel_nikD nickel i 100.0 3.7E-38 8E-43 319.3 22.3 194 112-345 1-214 (230)
490 cd03246 ABCC_Protease_Secretio 100.0 3E-38 6.4E-43 306.0 20.3 157 98-333 1-172 (173)
491 cd03369 ABCC_NFT1 Domain 2 of 100.0 5.6E-38 1.2E-42 312.8 22.7 184 96-335 5-202 (207)
492 PRK14264 phosphate ABC transpo 100.0 1.2E-37 2.6E-42 328.3 26.4 213 414-630 35-289 (305)
493 cd03215 ABC_Carb_Monos_II This 100.0 2.9E-38 6.3E-43 308.6 20.2 161 97-333 4-181 (182)
494 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 3.1E-38 6.8E-43 367.9 24.2 203 423-631 450-674 (686)
495 COG4987 CydC ABC-type transpor 100.0 8.5E-39 1.8E-43 341.8 17.7 202 424-630 336-561 (573)
496 cd03213 ABCG_EPDR ABCG transpo 100.0 4.9E-38 1.1E-42 310.1 21.9 170 97-335 3-191 (194)
497 TIGR02770 nickel_nikD nickel i 100.0 6E-38 1.3E-42 317.7 23.1 206 439-648 1-230 (230)
498 PRK14261 phosphate ABC transpo 100.0 1.1E-37 2.4E-42 320.2 25.4 204 423-630 5-237 (253)
499 cd03289 ABCC_CFTR2 The CFTR su 100.0 4.2E-38 9E-43 326.1 22.3 199 425-631 3-226 (275)
500 PRK10790 putative multidrug tr 100.0 5.7E-38 1.2E-42 360.1 25.7 213 96-347 339-564 (592)
No 1
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=2.1e-95 Score=806.03 Aligned_cols=523 Identities=42% Similarity=0.704 Sum_probs=449.7
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccCccCCC
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMS 175 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~~~~~~ 175 (652)
.+|+++|++++|+++++|+++||+|.+|+++||||+||||||||||+|+|.+.|++|+|... ...+|+|++|++.....
T Consensus 2 ~~i~~~~ls~~~g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~-~~~~v~~l~Q~~~~~~~ 80 (530)
T COG0488 2 SMITLENLSLAYGDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRP-KGLRVGYLSQEPPLDPE 80 (530)
T ss_pred ceEEEeeeEEeeCCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeec-CCceEEEeCCCCCcCCC
Confidence 46999999999999999999999999999999999999999999999999999999999987 34689999999998888
Q ss_pred CCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccccC
Q 006275 176 RTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDR 255 (652)
Q Consensus 176 ~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~ 255 (652)
.||.+.+..++.......+.++.+....... .......+......++.|..+.++..++..+|++.. ++
T Consensus 81 ~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~--~~ 149 (530)
T COG0488 81 KTVLDYVIEGFGELRELLAELEEAYALLADP---------DDELLAELEALLEELDGWTLEARAEEALLGLGFPDE--DR 149 (530)
T ss_pred ccHHHHHHhhhHHHHHHHHHHHHHHHhcccc---------hhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc--cC
Confidence 8999999877765444444333333222111 112223334445556778999999999999999754 89
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcCCeEE
Q 006275 256 LVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGVSR 335 (652)
Q Consensus 256 ~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~ 335 (652)
++.+||||||.||+||+||+.+||+|||||||||||.+++.||.++|+++..|+|+||||++|++.+|++|+.++.|++.
T Consensus 150 ~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~gtviiVSHDR~FLd~V~t~I~~ld~g~l~ 229 (530)
T COG0488 150 PVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYPGTVIVVSHDRYFLDNVATHILELDRGKLT 229 (530)
T ss_pred chhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHhhheEEecCCcee
Confidence 99999999999999999999999999999999999999999999999877669999999999999999999999999999
Q ss_pred EecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-ccchhHHHHHHHHHHHHhhhccccc-ccceEEe
Q 006275 336 TYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGAN-SGRASSAEKKLERLQEEEQIEKPFQ-RKQMKIR 413 (652)
Q Consensus 336 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~l~~l~~~~~~~~~~~-~~~~~~~ 413 (652)
.|.|+|+.|..++......+...+.++++.+++...++++....++ +.++.++.+.+++++......++.. .....+.
T Consensus 230 ~y~Gny~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~k~a~sr~k~l~k~~~~~~~~~~~~~~~~~~~~ 309 (530)
T COG0488 230 PYKGNYSSYLEQKAERLRQEAAAYEKQQKELAKEQEWIRRGKAAASKAKKAKSRIKRLEKLEARLAEERPVEEGKPLAFR 309 (530)
T ss_pred EecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHhhhhhcccccccccceee
Confidence 9999999999999888877788888888999989999988765432 2466777777787774322233322 3334455
Q ss_pred cCCCC-CCCCcEEEEEeeeeEeCC-eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecccc
Q 006275 414 FPERG-RSGRSVVTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPN 491 (652)
Q Consensus 414 ~p~~~-~~~~~~i~~~~v~~~y~~-~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~ 491 (652)
++++. ..++.+++++|+++.|++ +.+++++||.|.+|+++||+||||+|||||||+|+|...|.+|+|.++. .+..+
T Consensus 310 f~~~~~~~g~~vl~~~~~~~~y~~~~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~-~v~ig 388 (530)
T COG0488 310 FPPPGKRLGKLVLEFENVSKGYDGGRLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGE-TVKIG 388 (530)
T ss_pred ccCCcccCCCeeEEEeccccccCCCceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCC-ceEEE
Confidence 56655 478899999999999966 6899999999999999999999999999999999999999999999864 47789
Q ss_pred eecccccccCCCCCCHHHHHHHhhhhccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCC
Q 006275 492 YFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPT 571 (652)
Q Consensus 492 ~~~~~~~~~~~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt 571 (652)
||.|..... .++.|+.+++...........++..|++|+|..+...+++..||||||.||.||+.++.+|+||||||||
T Consensus 389 yf~Q~~~~l-~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~~~~~~v~~LSGGEk~Rl~La~ll~~~pNvLiLDEPT 467 (530)
T COG0488 389 YFDQHRDEL-DPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGEDQEKPVGVLSGGEKARLLLAKLLLQPPNLLLLDEPT 467 (530)
T ss_pred EEEehhhhc-CccCcHHHHHHhhCccccHHHHHHHHHHcCCChHHHhCchhhcCHhHHHHHHHHHHhccCCCEEEEcCCC
Confidence 999987443 3778999999887655446789999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhhcC
Q 006275 572 NHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTSFS 633 (652)
Q Consensus 572 ~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~~~ 633 (652)
|+||+++.+.|.++|.+|.+|||+||||.+|+..+|++++.+.+ ++..+.|+|++|.+...
T Consensus 468 NhLDi~s~~aLe~aL~~f~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~~~~~ 528 (530)
T COG0488 468 NHLDIESLEALEEALLDFEGTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYLEQKK 528 (530)
T ss_pred ccCCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHHHhhc
Confidence 99999999999999999999999999999999999999999998 88889999999987653
No 2
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-89 Score=785.17 Aligned_cols=516 Identities=31% Similarity=0.531 Sum_probs=410.1
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccCccCCCC
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSR 176 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~~~~~~~ 176 (652)
+|+++|++++|+++++|+||||+|++|+++||+|||||||||||++|+|+++|++|+|.+++. ..++|++|++.. ...
T Consensus 1 ~i~i~nls~~~g~~~~l~~vs~~i~~Ge~v~LvG~NGsGKSTLLkiL~G~~~pd~G~I~~~~~-~~i~~~~q~~~~-~~~ 78 (638)
T PRK10636 1 MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGN-WQLAWVNQETPA-LPQ 78 (638)
T ss_pred CEEEEEEEEEeCCceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-CEEEEEecCCCC-CCC
Confidence 388999999999999999999999999999999999999999999999999999999999863 479999997533 345
Q ss_pred CHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccccCC
Q 006275 177 TVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRL 256 (652)
Q Consensus 177 Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~ 256 (652)
++.+++...+.........+.. .... ... ..+..+.......+.+..+.++.+++..+||..+..+++
T Consensus 79 ~~~~~v~~~~~~~~~l~~~~~~----~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~L~~lgl~~~~~~~~ 146 (638)
T PRK10636 79 PALEYVIDGDREYRQLEAQLHD----ANER-NDG-------HAIATIHGKLDAIDAWTIRSRAASLLHGLGFSNEQLERP 146 (638)
T ss_pred CHHHHHHHhhHHHHHHHHHHHH----Hhcc-CCH-------HHHHHHHHHHHhcCCcchHHHHHHHHHhCCCCchhhcCc
Confidence 7777664322110000000000 0000 000 000001111112334566778999999999965567899
Q ss_pred CCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcCCeEEE
Q 006275 257 VASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGVSRT 336 (652)
Q Consensus 257 ~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~ 336 (652)
+.+|||||||||+|||||+.+|+||||||||||||+.++.||.++|++.+.|||+||||++++..+||+|++|++|++..
T Consensus 147 ~~~LSgGerqRv~LA~aL~~~P~lLLLDEPtn~LD~~~~~~L~~~L~~~~~tviivsHd~~~l~~~~d~i~~L~~G~i~~ 226 (638)
T PRK10636 147 VSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQQSLFE 226 (638)
T ss_pred hhhcCHHHHHHHHHHHHHccCCCEEEEcCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHhcCEEEEEeCCEEEE
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999988
Q ss_pred ecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-cccchhHHHHHHHHHHHHhhhcccccccceEEecC
Q 006275 337 YEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGA-NSGRASSAEKKLERLQEEEQIEKPFQRKQMKIRFP 415 (652)
Q Consensus 337 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~p 415 (652)
|.|+|+.|...+......+...+..+++.+.+..+++.+....+ ....+.+..+.++++.. ..++.......+.+|
T Consensus 227 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~a~~~~~a~~r~~~l~~~~~---~~~~~~~~~~~~~~~ 303 (638)
T PRK10636 227 YTGNYSSFEVQRATRLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQAQSRIKMLERMEL---IAPAHVDNPFHFSFR 303 (638)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhhc---ccccccCCceeEecC
Confidence 99999999987776666667778888888887777777643311 11222334444454432 111111223445555
Q ss_pred CCCCCCCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecccceecc
Q 006275 416 ERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQ 495 (652)
Q Consensus 416 ~~~~~~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~~~~ 495 (652)
++..+++.+|+++||++.|+++.+|+++||+|++|+++||+||||||||||+++|+|+++|++|+|.+++. +..+|++|
T Consensus 304 ~~~~~~~~~l~~~~l~~~y~~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-~~igy~~Q 382 (638)
T PRK10636 304 APESLPNPLLKMEKVSAGYGDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-IKLGYFAQ 382 (638)
T ss_pred CCccCCCceEEEEeeEEEeCCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-EEEEEecC
Confidence 55556778999999999999889999999999999999999999999999999999999999999999742 34678887
Q ss_pred cccccCCCCCCHHHHHHHhhhhccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCC
Q 006275 496 NQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 575 (652)
Q Consensus 496 ~~~~~~~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD 575 (652)
.+...+.+..++.+++...........+.++|+.+++.....++++.+|||||||||+|||+|+.+|+||||||||||||
T Consensus 383 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGekqRl~La~~l~~~p~lLlLDEPt~~LD 462 (638)
T PRK10636 383 HQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLD 462 (638)
T ss_pred cchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCC
Confidence 64333455667888764322222345678899999996556799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 576 IPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 576 ~~~~~~l~~~l~~~~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
+.++..+.++|.++++|||+||||++++..+||+|++|++|++..+.|++++|.+
T Consensus 463 ~~~~~~l~~~L~~~~gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 463 LDMRQALTEALIDFEGALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred HHHHHHHHHHHHHcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 9999999999999988999999999999999999999999999888999999844
No 3
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=2.1e-88 Score=779.75 Aligned_cols=521 Identities=33% Similarity=0.573 Sum_probs=407.2
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccCccCCCC
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSR 176 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~~~~~~~ 176 (652)
+|+++|++++|+++++|+||||+|++|+++||+|||||||||||++|+|+++|++|+|.+++ ...++|++|.+......
T Consensus 3 ~l~i~~ls~~~~~~~il~~is~~i~~Ge~v~LvG~NGsGKSTLLriiaG~~~p~~G~I~~~~-~~~~~~l~q~~~~~~~~ 81 (635)
T PRK11147 3 LISIHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNGEVLLDDGRIIYEQ-DLIVARLQQDPPRNVEG 81 (635)
T ss_pred EEEEeeEEEEeCCceeEeCcEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEeCC-CCEEEEeccCCCCCCCC
Confidence 69999999999988899999999999999999999999999999999999999999999985 45689999986543456
Q ss_pred CHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccccCC
Q 006275 177 TVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRL 256 (652)
Q Consensus 177 Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~ 256 (652)
++.+++...+............+...+.. ....+ .+..+..+.......+.+....++.++++.+|+. .+++
T Consensus 82 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgl~---~~~~ 153 (635)
T PRK11147 82 TVYDFVAEGIEEQAEYLKRYHDISHLVET-DPSEK----NLNELAKLQEQLDHHNLWQLENRINEVLAQLGLD---PDAA 153 (635)
T ss_pred CHHHHHHHhhHHHHHHHHHHHHHHHHhcc-CchHH----HHHHHHHHHHHHHhcCcccHHHHHHHHHHhCCCC---CCCc
Confidence 88887653322111000011111110000 00000 1111111111111223445677889999999995 3788
Q ss_pred CCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcCCeEEE
Q 006275 257 VASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGVSRT 336 (652)
Q Consensus 257 ~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~ 336 (652)
+.+|||||||||+|||||+.+|+||||||||||||+.++.||.++|++.+.|||+||||++++..+||+|++|++|++..
T Consensus 154 ~~~LSgGekqRv~LAraL~~~P~lLLLDEPt~~LD~~~~~~L~~~L~~~~~tvlivsHd~~~l~~~~d~i~~L~~G~i~~ 233 (635)
T PRK11147 154 LSSLSGGWLRKAALGRALVSNPDVLLLDEPTNHLDIETIEWLEGFLKTFQGSIIFISHDRSFIRNMATRIVDLDRGKLVS 233 (635)
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhcCeEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999998887899999999999999999999999999988
Q ss_pred ecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHHHHHHhhhcccccccceEEecCC
Q 006275 337 YEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQIEKPFQRKQMKIRFPE 416 (652)
Q Consensus 337 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~p~ 416 (652)
+.|+|++|..++......+...+..+++.+++...++++ ...+...+..+..+.+++++... ..+........+.+|+
T Consensus 234 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 311 (635)
T PRK11147 234 YPGNYDQYLLEKEEALRVEELQNAEFDRKLAQEEVWIRQ-GIKARRTRNEGRVRALKALRRER-SERREVMGTAKMQVEE 311 (635)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhhhhhHHHHHHHHHHhhhhh-ccccccCCceeEEeCC
Confidence 899999999887665555555666666666666666655 11111111122333344433111 1111112233455555
Q ss_pred CCCCCCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecccceeccc
Q 006275 417 RGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN 496 (652)
Q Consensus 417 ~~~~~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~~~~~ 496 (652)
...+++.+|+++||++.|+++.+|+++||+|++|+++||+|||||||||||++|+|+++|++|+|.+ |.++..+|+.|.
T Consensus 312 ~~~~~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~~i~y~~q~ 390 (635)
T PRK11147 312 ASRSGKIVFEMENVNYQIDGKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKLEVAYFDQH 390 (635)
T ss_pred CCCCCCceEEEeeeEEEECCeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCcEEEEEeCc
Confidence 5556778999999999999889999999999999999999999999999999999999999999999 555667788775
Q ss_pred ccccCCCCCCHHHHHHHhhhhc----cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCC
Q 006275 497 QAEALDLDKTVLETVAEAAEDW----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTN 572 (652)
Q Consensus 497 ~~~~~~~~~tv~e~~~~~~~~~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~ 572 (652)
. ..+++.+|+.+++....... ....+.++|+.+++..+..++++.+|||||||||+|||||+.+|+|||||||||
T Consensus 391 ~-~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGekqRl~la~al~~~p~lLlLDEPt~ 469 (635)
T PRK11147 391 R-AELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHPKRAMTPVKALSGGERNRLLLARLFLKPSNLLILDEPTN 469 (635)
T ss_pred c-cccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 4 34677899999998643211 134578899999996566799999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEe-CCEEEeecCChhhHhh
Q 006275 573 HLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVK-GSNLQDYAGDYNVCFT 630 (652)
Q Consensus 573 ~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~i~~~~drvi~l~-~g~i~~~~g~~~~~~~ 630 (652)
|||+.++..+.++|+++++|||+||||++++..+||++++|+ +|++..|.|+|++|.+
T Consensus 470 ~LD~~~~~~l~~~l~~~~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 470 DLDVETLELLEELLDSYQGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred CCCHHHHHHHHHHHHhCCCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 999999999999999998899999999999999999999998 8999999999999954
No 4
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=9.7e-87 Score=755.88 Aligned_cols=526 Identities=32% Similarity=0.517 Sum_probs=401.2
Q ss_pred CceEEEeEEEEeC-CeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccCccCC
Q 006275 96 SGVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSM 174 (652)
Q Consensus 96 ~~i~v~~ls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~~~~~ 174 (652)
++|+++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ ...||||+|++.+++
T Consensus 5 ~~l~i~~l~~~y~~~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~-~~~i~~v~Q~~~~~~ 83 (556)
T PRK11819 5 YIYTMNRVSKVVPPKKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAP-GIKVGYLPQEPQLDP 83 (556)
T ss_pred EEEEEeeEEEEeCCCCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-CCEEEEEecCCCCCC
Confidence 4799999999998 78899999999999999999999999999999999999999999999874 357999999998878
Q ss_pred CCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCccccc
Q 006275 175 SRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGD 254 (652)
Q Consensus 175 ~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~ 254 (652)
..||.||+...+.................. ...+.+..+++....+.......+.++...++.++++.+|+. ..+
T Consensus 84 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~ 158 (556)
T PRK11819 84 EKTVRENVEEGVAEVKAALDRFNEIYAAYA---EPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCP--PWD 158 (556)
T ss_pred CCcHHHHHHHhhHHHHHHHHHHHHHHHHhc---cCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCC--ccc
Confidence 889999986432110000000000000000 000001112222223333334445566678889999999995 368
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcCCeE
Q 006275 255 RLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGVS 334 (652)
Q Consensus 255 ~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~ii~l~~G~~ 334 (652)
+++.+|||||||||+|||||+.+|++|||||||||||+.++.++.++|++.+.|||+||||++++..+||+|++|++|++
T Consensus 159 ~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~~tviiisHd~~~~~~~~d~i~~l~~g~i 238 (556)
T PRK11819 159 AKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYPGTVVAVTHDRYFLDNVAGWILELDRGRG 238 (556)
T ss_pred CchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeEEEEeCCEE
Confidence 89999999999999999999999999999999999999999999999988778999999999999999999999999998
Q ss_pred EEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHHHHHHhhhcccccccceEEec
Q 006275 335 RTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQIEKPFQRKQMKIRF 414 (652)
Q Consensus 335 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 414 (652)
..+.|+|++|...+......+...++++++.+.+..+.+++.... .........+.+++.... ..+..+....+.+
T Consensus 239 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 314 (556)
T PRK11819 239 IPWEGNYSSWLEQKAKRLAQEEKQEAARQKALKRELEWVRQSPKA-RQAKSKARLARYEELLSE---EYQKRNETNEIFI 314 (556)
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHhhcc---cccccCCCceeec
Confidence 779999999987665444444444555555554444443321000 000011111122222110 1111111112223
Q ss_pred CCCCCCCCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecccceec
Q 006275 415 PERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFE 494 (652)
Q Consensus 415 p~~~~~~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~~~ 494 (652)
|+.....+++|+++|+++.|+++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+++ ++..+|++
T Consensus 315 ~~~~~~~~~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~~~i~~v~ 393 (556)
T PRK11819 315 PPGPRLGDKVIEAENLSKSFGDRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-TVKLAYVD 393 (556)
T ss_pred CCCCCCCCeEEEEEeEEEEECCeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-ceEEEEEe
Confidence 33333356789999999999988999999999999999999999999999999999999999999999954 44567887
Q ss_pred ccccccCCCCCCHHHHHHHhhhh----ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCC
Q 006275 495 QNQAEALDLDKTVLETVAEAAED----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (652)
Q Consensus 495 ~~~~~~~~~~~tv~e~~~~~~~~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEP 570 (652)
|+. ..+++..|+.+++...... .....+..+++.+++.....++++.+|||||||||+|||||+.+|++||||||
T Consensus 394 q~~-~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEP 472 (556)
T PRK11819 394 QSR-DALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRFNFKGGDQQKKVGVLSGGERNRLHLAKTLKQGGNVLLLDEP 472 (556)
T ss_pred Cch-hhcCCCCCHHHHHHhhcccccccccHHHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 753 2456778999999864321 11234567899999954457899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEeC-CEEEeecCChhhHhhhcC
Q 006275 571 TNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKG-SNLQDYAGDYNVCFTSFS 633 (652)
Q Consensus 571 t~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~i~~~~drvi~l~~-g~i~~~~g~~~~~~~~~~ 633 (652)
|+|||+.++..+.++|.++.+|||+||||++++..+||+|++|++ |++..+.|++++|.+..+
T Consensus 473 t~~LD~~~~~~l~~~l~~~~~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~~~ 536 (556)
T PRK11819 473 TNDLDVETLRALEEALLEFPGCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEEDKK 536 (556)
T ss_pred CCCCCHHHHHHHHHHHHhCCCeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHHHHH
Confidence 999999999999999999878999999999999999999999985 888888999998876643
No 5
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-86 Score=748.30 Aligned_cols=525 Identities=32% Similarity=0.555 Sum_probs=393.4
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccCccCCCC
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSR 176 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~~~~~~~ 176 (652)
+|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. .+|+|++|++.++...
T Consensus 1 ml~i~~ls~~~~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~-~~i~~~~q~~~~~~~~ 79 (530)
T PRK15064 1 MLSTANITMQFGAKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPN-ERLGKLRQDQFAFEEF 79 (530)
T ss_pred CEEEEEEEEEeCCcEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-CEEEEEeccCCcCCCC
Confidence 389999999999888999999999999999999999999999999999999999999999863 4799999998877888
Q ss_pred CHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccccCC
Q 006275 177 TVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRL 256 (652)
Q Consensus 177 Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~ 256 (652)
||+||+..............+.+.............+ ............+..+.++.++++.+|+.....+++
T Consensus 80 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~ 152 (530)
T PRK15064 80 TVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKV-------ADLEVKFAEMDGYTAEARAGELLLGVGIPEEQHYGL 152 (530)
T ss_pred cHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHH-------HHHHHHHHhcCchhHHHHHHHHHHhCCCChhHhcCc
Confidence 9999986432110000000000000000000000000 001111112233344567889999999964344678
Q ss_pred CCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcCCeEEE
Q 006275 257 VASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGVSRT 336 (652)
Q Consensus 257 ~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~ 336 (652)
+.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++.++|||+||||++++.++||+|++|++|++..
T Consensus 153 ~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tiiivsHd~~~~~~~~d~i~~l~~g~i~~ 232 (530)
T PRK15064 153 MSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNERNSTMIIISHDRHFLNSVCTHMADLDYGELRV 232 (530)
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcceEEEEeCCEEEE
Confidence 89999999999999999999999999999999999999999999998889999999999999999999999999999867
Q ss_pred ecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHHHHHHhh-hcccccccceEEecC
Q 006275 337 YEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQ-IEKPFQRKQMKIRFP 415 (652)
Q Consensus 337 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~-~~~~~~~~~~~~~~p 415 (652)
+.|+|+++..++.........++..+++++.+....+.+.... +..+..+.....++..... ...+.......+.++
T Consensus 233 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (530)
T PRK15064 233 YPGNYDEYMTAATQARERLLADNAKKKAQIAELQSFVSRFSAN--ASKAKQATSRAKQIDKIKLEEVKPSSRQNPFIRFE 310 (530)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--chhhHHHHHHHHHHhhccccccCCccccCceeeCC
Confidence 8999999986555433333334444444444444443332111 1111111111111111000 000000000111222
Q ss_pred CCCCCCCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecccceecc
Q 006275 416 ERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQ 495 (652)
Q Consensus 416 ~~~~~~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~~~~ 495 (652)
.....++.+|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.+++.. ..+|++|
T Consensus 311 ~~~~~~~~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~-~i~~~~q 389 (530)
T PRK15064 311 QDKKLHRNALEVENLTKGFDNGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSENA-NIGYYAQ 389 (530)
T ss_pred CCCCCCCceEEEEeeEEeeCCceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCce-EEEEEcc
Confidence 222234568999999999998889999999999999999999999999999999999999999999998743 3567777
Q ss_pred cccccCCCCCCHHHHHHHhhh-hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCC
Q 006275 496 NQAEALDLDKTVLETVAEAAE-DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHL 574 (652)
Q Consensus 496 ~~~~~~~~~~tv~e~~~~~~~-~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~L 574 (652)
.....+....|+.+++..... ......+.++|+.+++..+..++++.+|||||||||+|||||+.+|+||||||||++|
T Consensus 390 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~~L 469 (530)
T PRK15064 390 DHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQDDIKKSVKVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHM 469 (530)
T ss_pred cccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCChhHhcCcccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCC
Confidence 543334556899999864321 1224467889999999545689999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhhc
Q 006275 575 DIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTSF 632 (652)
Q Consensus 575 D~~~~~~l~~~l~~~~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~~ 632 (652)
|+.++..+.+.|+++++|||+||||++++..+|||+++|++|+++.+.|+++++++..
T Consensus 470 D~~~~~~l~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~~ 527 (530)
T PRK15064 470 DMESIESLNMALEKYEGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRSQ 527 (530)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHHh
Confidence 9999999999999998899999999999999999999999999987789998886653
No 6
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.9e-85 Score=745.14 Aligned_cols=523 Identities=33% Similarity=0.533 Sum_probs=394.9
Q ss_pred ceEEEeEEEEeC-CeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccCccCCC
Q 006275 97 GVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMS 175 (652)
Q Consensus 97 ~i~v~~ls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~~~~~~ 175 (652)
+|+++|++++|+ ++++|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.+++ ...|||++|++.++++
T Consensus 4 ~i~~~nls~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~~~i~~v~Q~~~~~~~ 82 (552)
T TIGR03719 4 IYTMNRVSKVVPPKKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAP-GIKVGYLPQEPQLDPT 82 (552)
T ss_pred EEEEeeEEEecCCCCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-CCEEEEEeccCCCCCC
Confidence 699999999998 67899999999999999999999999999999999999999999999874 3579999999988788
Q ss_pred CCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccccC
Q 006275 176 RTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDR 255 (652)
Q Consensus 176 ~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~ 255 (652)
.||.||+...+............+...+... ..+ ....+.....+....+.+..+.+..++.++++.+|+. ..++
T Consensus 83 ~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~ 157 (552)
T TIGR03719 83 KTVRENVEEGVAEIKDALDRFNEISAKFAEP--DAD-MDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCP--PWDA 157 (552)
T ss_pred CcHHHHHHHhhHHHHHHHHHHHHHHHHhccC--chh-hHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCC--cccC
Confidence 9999998643211000000000000000000 000 0001111122223333445555667888999999995 3588
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcCCeEE
Q 006275 256 LVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGVSR 335 (652)
Q Consensus 256 ~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~ 335 (652)
++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++.+.|||+||||++++..+||+|++|++|++.
T Consensus 158 ~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~~~tvIiisHd~~~~~~~~d~v~~l~~g~i~ 237 (552)
T TIGR03719 158 DVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEYPGTVVAVTHDRYFLDNVAGWILELDRGRGI 237 (552)
T ss_pred chhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeEEEEECCEEE
Confidence 89999999999999999999999999999999999999999999999887789999999999999999999999999987
Q ss_pred EecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHHHHHHhhhcccccccceEEecC
Q 006275 336 TYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQIEKPFQRKQMKIRFP 415 (652)
Q Consensus 336 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~p 415 (652)
.+.|+|++|...+....+.+...+.+.++++.+....+.+.... .........+.++++.+. ..+.......+.++
T Consensus 238 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 313 (552)
T TIGR03719 238 PWEGNYSSWLEQKEKRLEQEEKEESARQKALKRELEWVRSSPKA-RQAKSKARLARYEELLSQ---EFQKRNETAEIYIP 313 (552)
T ss_pred EecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHhhhhh---cccccCCCceeecC
Confidence 78999999987655444434344444444444333333221000 000001111222222111 11111111122223
Q ss_pred CCCCCCCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecccceecc
Q 006275 416 ERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQ 495 (652)
Q Consensus 416 ~~~~~~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~~~~ 495 (652)
.....++++|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.+++ ++..+|++|
T Consensus 314 ~~~~~~~~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~~-~~~i~~v~q 392 (552)
T TIGR03719 314 PGPRLGDKVIEAENLSKGFGDKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIGE-TVKLAYVDQ 392 (552)
T ss_pred CCCCCCCeEEEEeeEEEEECCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEECC-ceEEEEEeC
Confidence 2223356789999999999988999999999999999999999999999999999999999999999954 445678877
Q ss_pred cccccCCCCCCHHHHHHHhhhh----ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCC
Q 006275 496 NQAEALDLDKTVLETVAEAAED----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPT 571 (652)
Q Consensus 496 ~~~~~~~~~~tv~e~~~~~~~~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt 571 (652)
+. ..+++..|+.+++...... .....+.++++.+++.....++++.+|||||||||+|||||+.+|++|||||||
T Consensus 393 ~~-~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt 471 (552)
T TIGR03719 393 SR-DALDPNKTVWEEISGGLDIIQLGKREVPSRAYVGRFNFKGSDQQKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPT 471 (552)
T ss_pred Cc-cccCCCCcHHHHHHhhccccccCcchHHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Confidence 53 2356778999999875321 112345678999999544578999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEeC-CEEEeecCChhhHhhh
Q 006275 572 NHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKG-SNLQDYAGDYNVCFTS 631 (652)
Q Consensus 572 ~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~i~~~~drvi~l~~-g~i~~~~g~~~~~~~~ 631 (652)
+|||+.+++.+.++|+++.+|||+||||++++..+||+|++|++ |++..+.|++++|.+.
T Consensus 472 ~~LD~~~~~~l~~~l~~~~~~viivsHd~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~~~ 532 (552)
T TIGR03719 472 NDLDVETLRALEEALLEFAGCAVVISHDRWFLDRIATHILAFEGDSHVEWFEGNYSEYEED 532 (552)
T ss_pred CCCCHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHhCCEEEEEECCCeEEEeCCCHHHHHHH
Confidence 99999999999999999888999999999999999999999986 6888788999887644
No 7
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=8e-86 Score=698.90 Aligned_cols=523 Identities=40% Similarity=0.659 Sum_probs=461.1
Q ss_pred CCCCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccCcc
Q 006275 93 SISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEV 172 (652)
Q Consensus 93 ~~~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~~~ 172 (652)
.....+.++|++++|.+..+++|+.|++.+|+.+||+|+|||||||+|++|.|-..|..- +..+..+.++...
T Consensus 71 ~~s~dvk~~sls~s~~g~~l~kd~~~El~~g~rygLiG~nG~Gkst~L~~i~~~e~P~p~-------~~d~y~ls~e~~p 143 (614)
T KOG0927|consen 71 PISRDVKIESLSLSFHGVELIKDVTLELNRGRRYGLIGPNGSGKSTFLRAIAGREVPIPE-------HIDFYLLSREIEP 143 (614)
T ss_pred cccccceeeeeeeccCCceeeeeeeEEecCCceEEEEcCCCCcHhHHHHHHhcCCCCCCc-------ccchhhhcccCCC
Confidence 445679999999999999999999999999999999999999999999999999888542 2345666676544
Q ss_pred CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCccc
Q 006275 173 SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADD 252 (652)
Q Consensus 173 ~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~ 252 (652)
....+|..-++....+........+.+...++. ...+..+.++++.+.++....+.++.++|..+|+..+.
T Consensus 144 s~~~av~~v~~~~~~e~~rle~~~E~l~~~~d~---------~~~~~l~~~~~r~~~~d~~~~~~k~~~il~glgf~~~m 214 (614)
T KOG0927|consen 144 SEKQAVQAVVMETDHERKRLEYLAEDLAQACDD---------KEKDELDELYERLDEMDNDTFEAKAAKILHGLGFLSEM 214 (614)
T ss_pred chHHHHHHHhhhhHHHHHHHHHHHHHHHhhccc---------hhhhHHHHHHHHHHhhCchhHHHHHHHHHHhcCCCHhH
Confidence 333455555545555444444444555444332 12344556677888899999999999999999999999
Q ss_pred ccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHccCCC-eEEEEecCHHHHHhhcCeEEEEcC
Q 006275 253 GDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDV-PMVIISHDRAFLDQLCTKIVETEM 331 (652)
Q Consensus 253 ~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~-tvIivsHd~~~l~~~~d~ii~l~~ 331 (652)
.++.+.+|||||++|++|||||..+|++|||||||||||++++.||.++|.++.. ++|+++|+.++++.+|++|+.+++
T Consensus 215 ~~k~~~~~SgGwrmR~aLAr~Lf~kP~LLLLDEPtnhLDleA~~wLee~L~k~d~~~lVi~sh~QDfln~vCT~Ii~l~~ 294 (614)
T KOG0927|consen 215 QDKKVKDLSGGWRMRAALARALFQKPDLLLLDEPTNHLDLEAIVWLEEYLAKYDRIILVIVSHSQDFLNGVCTNIIHLDN 294 (614)
T ss_pred HHHHhhccCchHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHhccCceEEEEecchhhhhhHhhhhheecc
Confidence 9999999999999999999999999999999999999999999999999999887 899999999999999999999999
Q ss_pred CeEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--ccccchhHHHHHHHHHHHHhhhcccccccc
Q 006275 332 GVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAG--ANSGRASSAEKKLERLQEEEQIEKPFQRKQ 409 (652)
Q Consensus 332 G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 409 (652)
++.+.|.|||++|+..+.++...+..+|+|+++++.....++.+...+ ...+++.+.++.+.++.+....+++...+.
T Consensus 295 kkl~~y~Gnydqy~~tr~E~~~~q~K~~~kqqk~i~~~K~~ia~~g~g~a~~~rka~s~~K~~~km~~~gL~ek~~~~k~ 374 (614)
T KOG0927|consen 295 KKLIYYEGNYDQYVKTRSELEENQMKAYEKQQKQIAHMKDLIARFGHGSAKLGRKAQSKEKTLDKMEADGLTEKVVGEKV 374 (614)
T ss_pred cceeeecCCHHHHhhHHHHHhHHHHHHHHHHHhHHHHhhHHHHhhcccchhhhHHHhhhhhhHHHHhhccccccccCCce
Confidence 999999999999999999999999999999999999999999998765 344677888888898888877888888888
Q ss_pred eEEecCCCCCCCCcEEEEEeeeeEeCCe-eeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceec
Q 006275 410 MKIRFPERGRSGRSVVTIKNLEFGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV 488 (652)
Q Consensus 410 ~~~~~p~~~~~~~~~i~~~~v~~~y~~~-~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~ 488 (652)
..+.+|..+..+.+++.++||+|.|.++ .++++++|-|..++++++|||||+|||||||++.|.+.|..|.|...-...
T Consensus 375 l~~~f~~vg~~p~pvi~~~nv~F~y~~~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H~~ 454 (614)
T KOG0927|consen 375 LSFRFPEVGKIPPPVIMVQNVSFGYSDNPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSHNK 454 (614)
T ss_pred EEEEcccccCCCCCeEEEeccccCCCCcchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccccccccccccccc
Confidence 8999998888888999999999999876 589999999999999999999999999999999999999999998765544
Q ss_pred ccceecccccccCCCCCCHHHHHHHhhhh-ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEE
Q 006275 489 LPNYFEQNQAEALDLDKTVLETVAEAAED-WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (652)
Q Consensus 489 ~~~~~~~~~~~~~~~~~tv~e~~~~~~~~-~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlL 567 (652)
.+ ++.|+....++.+.++.+++...... +..++++.+|++||+..+..+.++.+||+|||.||++|++++.+|.+|||
T Consensus 455 ~~-~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~~p~~~LS~Gqr~rVlFa~l~~kqP~lLlL 533 (614)
T KOG0927|consen 455 LP-RYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQVVPMSQLSDGQRRRVLFARLAVKQPHLLLL 533 (614)
T ss_pred ch-hhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccccccchhhcccccchhHHHHHHHhcCCcEEEe
Confidence 33 67888888888999999999987764 77888999999999988889999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhhc
Q 006275 568 DEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTSF 632 (652)
Q Consensus 568 DEPt~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~~ 632 (652)
||||||||+++...+.++|+++.++||+||||..+|.+++++|++..+|.+..++|++.+|.+..
T Consensus 534 DEPtnhLDi~tid~laeaiNe~~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i~~yk~~l 598 (614)
T KOG0927|consen 534 DEPTNHLDIETIDALAEAINEFPGGVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDIEIYKEHL 598 (614)
T ss_pred cCCCcCCCchhHHHHHHHHhccCCceeeeechhhHHHHHHHHhHhhccCceeecCccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999886543
No 8
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=2.7e-82 Score=730.57 Aligned_cols=520 Identities=29% Similarity=0.472 Sum_probs=392.6
Q ss_pred CCCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccCccC
Q 006275 94 ISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVS 173 (652)
Q Consensus 94 ~~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~~~~ 173 (652)
...+|+++|++|+|+++++|+|+||+|++|+++||||+|||||||||++|+|... .| + ....+|+|++|++. .
T Consensus 174 ~~~~I~i~nls~~y~~~~ll~~isl~i~~Ge~~gLvG~NGsGKSTLLr~l~g~~~--~g---~-p~~g~I~~~~Q~~~-g 246 (718)
T PLN03073 174 AIKDIHMENFSISVGGRDLIVDASVTLAFGRHYGLVGRNGTGKTTFLRYMAMHAI--DG---I-PKNCQILHVEQEVV-G 246 (718)
T ss_pred CceeEEEceEEEEeCCCEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CC---C-CCCCEEEEEeccCC-C
Confidence 3457999999999998889999999999999999999999999999999999741 13 1 12356889999853 2
Q ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHHHHH-----h----------hhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 174 MSRTVREEFMSAFKEEMEIAGKLERVQKAL-----E----------SAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 174 ~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~-----~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
...|+.+.+..............-.+.... . ...... ....+....+.......+.+..+.+
T Consensus 247 ~~~t~~~~v~~~~~~~~~~~~~~~~~~~q~~~l~~~~~~~~~~~~~~~~~~~---~~~~~r~~~~~~~~~~~~~~~~~~r 323 (718)
T PLN03073 247 DDTTALQCVLNTDIERTQLLEEEAQLVAQQRELEFETETGKGKGANKDGVDK---DAVSQRLEEIYKRLELIDAYTAEAR 323 (718)
T ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccch---HHHHHHHHHHHHHHHhcCcchHHHH
Confidence 456777665422111111000000000000 0 000000 1122333344445556677888999
Q ss_pred HHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHH
Q 006275 239 VSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAF 318 (652)
Q Consensus 239 i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~ 318 (652)
+.+++..+||.....++++.+|||||||||+|||||+.+|++|||||||+|||+.++.||.++|++.+.|||+||||+++
T Consensus 324 ~~~~L~~lgl~~~~~~~~~~~LSgG~k~rv~LA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~tviivsHd~~~ 403 (718)
T PLN03073 324 AASILAGLSFTPEMQVKATKTFSGGWRMRIALARALFIEPDLLLLDEPTNHLDLHAVLWLETYLLKWPKTFIVVSHAREF 403 (718)
T ss_pred HHHHHHHCCCChHHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHcCCEEEEEECCHHH
Confidence 99999999997667789999999999999999999999999999999999999999999999999889999999999999
Q ss_pred HHhhcCeEEEEcCCeEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-ccchhHHHHHHHHHHH
Q 006275 319 LDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGAN-SGRASSAEKKLERLQE 397 (652)
Q Consensus 319 l~~~~d~ii~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~l~~l~~ 397 (652)
+..+||+|++|++|++..|.|+|+.|...+......+...++.++++.++.++.+++....+. +..+....+.++++..
T Consensus 404 l~~~~d~i~~l~~g~i~~~~g~~~~~~~~~~~~~~~~~~~~e~~~k~~~~l~~~i~~~~~~a~~~~~~~s~~k~l~~~~~ 483 (718)
T PLN03073 404 LNTVVTDILHLHGQKLVTYKGDYDTFERTREEQLKNQQKAFESNERSRSHMQAFIDKFRYNAKRASLVQSRIKALDRLGH 483 (718)
T ss_pred HHHhCCEEEEEECCEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHhhcchHHHHHhh
Confidence 999999999999999988999999998877666666666777777777666666655432111 1111122233333322
Q ss_pred HhhhcccccccceEEecCCC-CCCCCcEEEEEeeeeEeCC-eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC
Q 006275 398 EEQIEKPFQRKQMKIRFPER-GRSGRSVVTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK 475 (652)
Q Consensus 398 ~~~~~~~~~~~~~~~~~p~~-~~~~~~~i~~~~v~~~y~~-~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~ 475 (652)
.. ++.......+.+|.+ ..++.++|+++||++.|++ +.+|+++||+|++|++++|+|||||||||||++|+|+++
T Consensus 484 ~~---~~~~~~~~~~~~~~~~~~~~~~~L~~~~ls~~y~~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~ 560 (718)
T PLN03073 484 VD---AVVNDPDYKFEFPTPDDRPGPPIISFSDASFGYPGGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ 560 (718)
T ss_pred hh---ccccCCCceeecCCCccCCCCceEEEEeeEEEeCCCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC
Confidence 11 111111122333332 2344578999999999964 569999999999999999999999999999999999999
Q ss_pred CCeeEEEECceecccceecccccccCCCCCCHHHHHHHh----hhhccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHH
Q 006275 476 PRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEA----AEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKAR 551 (652)
Q Consensus 476 p~~G~i~~~g~~~~~~~~~~~~~~~~~~~~tv~e~~~~~----~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqr 551 (652)
|++|+|.+++. ...+|++|... ...++.++.... ........+..+|+.+++..+..++++.+||||||||
T Consensus 561 p~~G~I~~~~~-~~igyv~Q~~~----~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~~~~~~~~LSgGqkqR 635 (718)
T PLN03073 561 PSSGTVFRSAK-VRMAVFSQHHV----DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGGQKSR 635 (718)
T ss_pred CCCceEEECCc-eeEEEEecccc----ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHHhcCCccccCHHHHHH
Confidence 99999998763 34567777532 222333332211 1122345688899999996556789999999999999
Q ss_pred HHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 552 LAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 552 v~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
|+|||||+.+|++|||||||+|||+.++..+.+.|.++.+|||+||||++++..+|||+++|++|++..+.|++++|.+.
T Consensus 636 vaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~~gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~~~ 715 (718)
T PLN03073 636 VAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLFQGGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYKKT 715 (718)
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHHHH
Confidence 99999999999999999999999999999999999988789999999999999999999999999998788998887543
No 9
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.8e-82 Score=690.04 Aligned_cols=454 Identities=23% Similarity=0.378 Sum_probs=365.9
Q ss_pred CceEEEeEEEEeCCe----eeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCC----CcEEEECCCC-------
Q 006275 96 SGVKLENISKSYKGV----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD----SGNVIKAKSN------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~----~G~i~~~~~~------- 160 (652)
+.|+++|+++.|... ++++||||+|.+||++||||.+||||||+.++|.|++++. +|+|.++|.+
T Consensus 4 ~lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~ 83 (539)
T COG1123 4 PLLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSER 83 (539)
T ss_pred ceEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHH
Confidence 379999999999532 5999999999999999999999999999999999999987 8999998752
Q ss_pred -------ceEEEEeccCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCC
Q 006275 161 -------MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVN 231 (652)
Q Consensus 161 -------~~i~~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (652)
..|+|++|+|. +.+..||.+.+...+.- .....
T Consensus 84 ~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~--------------------------------------h~~~~ 125 (539)
T COG1123 84 EMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRL--------------------------------------HGKGS 125 (539)
T ss_pred HHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHH--------------------------------------hcccc
Confidence 36999999984 33445776665432110 00111
Q ss_pred hhcHHHHHHHHhhhcCCCcccc-cCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCC
Q 006275 232 LDTLDAKVSKLMPELGFTADDG-DRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQD 306 (652)
Q Consensus 232 ~~~~~~~i~~ll~~lgl~~~~~-~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g 306 (652)
..+..+++.++|+.+|++++.. ++++++|||||||||.||+||+.+|++||+||||++||+.++.++.++|+ +.|
T Consensus 126 ~~ea~~~a~elL~~Vgl~~~~~~~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g 205 (539)
T COG1123 126 RAEARKRAVELLEQVGLPDPERRDRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELG 205 (539)
T ss_pred HHHHHHHHHHHHHHcCCCChhhhccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcC
Confidence 3345677889999999986555 46999999999999999999999999999999999999999999988874 479
Q ss_pred CeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccchh
Q 006275 307 VPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRAS 386 (652)
Q Consensus 307 ~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 386 (652)
.++|+||||++.+.++||||++|.+|.+ +..|..++.+..... .| ++.+++..
T Consensus 206 ~a~l~ITHDl~Vva~~aDrv~Vm~~G~i-VE~G~~~~i~~~p~h-------pY---------T~~Ll~a~---------- 258 (539)
T COG1123 206 MAVLFITHDLGVVAELADRVVVMYKGEI-VETGPTEEILSNPQH-------PY---------TRGLLAAV---------- 258 (539)
T ss_pred cEEEEEcCCHHHHHHhcCeEEEEECCEE-EEecCHHHHHhccCC-------cc---------cHHHHhhC----------
Confidence 9999999999999999999999999998 577876665432110 00 01111110
Q ss_pred HHHHHHHHHHHHhhhcccccccceEEecCCCCCCCCcEEEEEeeeeEeCC-----------eeeeeceEEEEEcCeEEEE
Q 006275 387 SAEKKLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYED-----------RLLFNRANLTIERGEKTAI 455 (652)
Q Consensus 387 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~-----------~~vl~~isl~i~~Ge~~~i 455 (652)
+.....+..... +.......++++++|+++.|.. ..+++||||+|++||++||
T Consensus 259 ---------------p~~~~~~~~~~~-~~~~~~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lgl 322 (539)
T COG1123 259 ---------------PRLGDEKIIRLP-RRGPLRAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGL 322 (539)
T ss_pred ---------------CCcccccccccc-cccccccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEE
Confidence 000000000000 0001126788999999999973 2579999999999999999
Q ss_pred EcCCCCcHHHHHHHHhCCCCCCeeEEEECceec------------ccceecccccccCCCCCCHHHHHHHhhhh------
Q 006275 456 IGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV------------LPNYFEQNQAEALDLDKTVLETVAEAAED------ 517 (652)
Q Consensus 456 ~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~------------~~~~~~~~~~~~~~~~~tv~e~~~~~~~~------ 517 (652)
||+||||||||.|+|+|+++|++|+|.++|.++ ....++|++...++|.+||.+.+......
T Consensus 323 VGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~ 402 (539)
T COG1123 323 VGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSG 402 (539)
T ss_pred ECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccch
Confidence 999999999999999999999999999999762 12356788888899999999999875431
Q ss_pred -ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHh----cCce
Q 006275 518 -WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISE----YKGT 592 (652)
Q Consensus 518 -~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~----~~~t 592 (652)
...+.+.++|+.+++..+.++++|++||||||||+||||||+.+|++||+|||||.||+..+..+.++|.+ ++.|
T Consensus 403 ~~~~~rv~~ll~~VgL~~~~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t 482 (539)
T COG1123 403 AERRARVAELLELVGLPPEFLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLT 482 (539)
T ss_pred HHHHHHHHHHHHHcCCCHHHHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCE
Confidence 12235788999999998889999999999999999999999999999999999999999999999998865 4679
Q ss_pred EEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 593 VITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 593 vi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
+|+||||+.+++.+||||++|++|+|++. |+.+..++.
T Consensus 483 ~lfISHDl~vV~~i~drv~vm~~G~iVE~-G~~~~v~~~ 520 (539)
T COG1123 483 YLFISHDLAVVRYIADRVAVMYDGRIVEE-GPTEKVFEN 520 (539)
T ss_pred EEEEeCCHHHHHhhCceEEEEECCeEEEe-CCHHHHhcC
Confidence 99999999999999999999999999964 777766544
No 10
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-81 Score=719.51 Aligned_cols=471 Identities=18% Similarity=0.307 Sum_probs=359.3
Q ss_pred CCceEEEeEEEEeCC----eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCC-----------
Q 006275 95 SSGVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKS----------- 159 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~----------- 159 (652)
+++|+++|++++|+. .++|+||||+|++||++||||+||||||||+++|+|+++|++|+|.++|.
T Consensus 10 ~~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~ 89 (623)
T PRK10261 10 RDVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIE 89 (623)
T ss_pred CceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccc
Confidence 457999999999962 46999999999999999999999999999999999999999999987652
Q ss_pred -------------CceEEEEeccC--ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHH
Q 006275 160 -------------NMKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQ 224 (652)
Q Consensus 160 -------------~~~i~~v~Q~~--~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (652)
...|||++|+| .+.+..||.||+...... .
T Consensus 90 ~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~---------------~-------------------- 134 (623)
T PRK10261 90 LSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRL---------------H-------------------- 134 (623)
T ss_pred cccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHH---------------h--------------------
Confidence 12599999998 466778999998632110 0
Q ss_pred HHHHhCChhcHHHHHHHHhhhcCCCc--ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHH
Q 006275 225 RKAQAVNLDTLDAKVSKLMPELGFTA--DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL 302 (652)
Q Consensus 225 ~~~~~~~~~~~~~~i~~ll~~lgl~~--~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L 302 (652)
..++..+..+++.++++.+|+.. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++.+.++|
T Consensus 135 ---~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll 211 (623)
T PRK10261 135 ---QGASREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLI 211 (623)
T ss_pred ---cCCCHHHHHHHHHHHHHHCCCCChhhHHhCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHH
Confidence 00111223456778899999963 3578899999999999999999999999999999999999999999888876
Q ss_pred c----cCCCeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 006275 303 G----KQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGA 378 (652)
Q Consensus 303 ~----~~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 378 (652)
+ +.|+|||+||||++++.++||||++|++|+++ ..|++.++...... .+. ..++.....
T Consensus 212 ~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~G~i~-~~g~~~~~~~~~~~-------~~~---------~~l~~~~~~ 274 (623)
T PRK10261 212 KVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAV-ETGSVEQIFHAPQH-------PYT---------RALLAAVPQ 274 (623)
T ss_pred HHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeCCeec-ccCCHHHhhcCCCC-------hhh---------hhhhhccCc
Confidence 4 24899999999999999999999999999985 67887665421100 000 000100000
Q ss_pred C-ccccchhHHHHHHHHHHHHhhhcccccccceEEecCCCCCCCCcEEEEEeeeeEeCC-----------eeeeeceEEE
Q 006275 379 G-ANSGRASSAEKKLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYED-----------RLLFNRANLT 446 (652)
Q Consensus 379 ~-~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~-----------~~vl~~isl~ 446 (652)
. ...+.... ...+... ...+.... ...++.....+.++|+++||++.|+. +.+|+++||+
T Consensus 275 ~~~~~~~~~~--~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~ 346 (623)
T PRK10261 275 LGAMKGLDYP--RRFPLIS----LEHPAKQE--PPIEQDTVVDGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFD 346 (623)
T ss_pred ccccccccCC--ccccccc----cccccccC--cccccccccCCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeE
Confidence 0 00000000 0000000 00000000 00001111124568999999999961 4699999999
Q ss_pred EEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-------------cceecccccccCCCCCCHHHHHHH
Q 006275 447 IERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------------PNYFEQNQAEALDLDKTVLETVAE 513 (652)
Q Consensus 447 i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------------~~~~~~~~~~~~~~~~tv~e~~~~ 513 (652)
|++||++||+|+||||||||+++|+|+++|++|+|.++|.++. .+|++|+....+++.+|+.+++..
T Consensus 347 i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~ 426 (623)
T PRK10261 347 LWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIME 426 (623)
T ss_pred EcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHH
Confidence 9999999999999999999999999999999999999997652 245566543356778999999876
Q ss_pred hhh--h-----ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHH
Q 006275 514 AAE--D-----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAI 586 (652)
Q Consensus 514 ~~~--~-----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l 586 (652)
... . .....+.++|+.+|+.....++++.+|||||||||+|||||+.+|+||||||||++||+.++..+.++|
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll 506 (623)
T PRK10261 427 PLRVHGLLPGKAAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLL 506 (623)
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHH
Confidence 421 1 112457789999999645679999999999999999999999999999999999999999999999999
Q ss_pred Hhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 587 SEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 587 ~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
+++ +.|||+||||++++..+||||++|++|++++ .|++++++
T Consensus 507 ~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~-~g~~~~i~ 552 (623)
T PRK10261 507 LDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVE-IGPRRAVF 552 (623)
T ss_pred HHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ecCHHHHh
Confidence 653 5699999999999999999999999999974 57776654
No 11
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-82 Score=709.98 Aligned_cols=442 Identities=22% Similarity=0.298 Sum_probs=351.7
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCC--CCcEEEECCCC-----------ce
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP--DSGNVIKAKSN-----------MK 162 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p--~~G~i~~~~~~-----------~~ 162 (652)
++|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++| ++|+|.++|.+ ..
T Consensus 4 ~~l~~~nl~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 83 (506)
T PRK13549 4 YLLEMKNITKTFGGVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERAG 83 (506)
T ss_pred ceEEEeeeEEEeCCeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHCC
Confidence 369999999999988899999999999999999999999999999999999996 89999998742 34
Q ss_pred EEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHH
Q 006275 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (652)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (652)
++|++|++.+++..|++||+....... .. ...+......++.++
T Consensus 84 i~~v~q~~~~~~~~tv~e~l~~~~~~~---------------~~---------------------~~~~~~~~~~~~~~~ 127 (506)
T PRK13549 84 IAIIHQELALVKELSVLENIFLGNEIT---------------PG---------------------GIMDYDAMYLRAQKL 127 (506)
T ss_pred eEEEEeccccCCCCcHHHHhhhccccc---------------cc---------------------CCcCHHHHHHHHHHH
Confidence 999999998878899999985321000 00 000011223456778
Q ss_pred hhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHH
Q 006275 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFL 319 (652)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l 319 (652)
++.+|+. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|+ +.|+|||+||||++++
T Consensus 128 l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~ 206 (506)
T PRK13549 128 LAQLKLD-INPATPVGNLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEV 206 (506)
T ss_pred HHHcCCC-CCcccchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHH
Confidence 8999996 56789999999999999999999999999999999999999999999988774 3588999999999999
Q ss_pred HhhcCeEEEEcCCeEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHHHHHHh
Q 006275 320 DQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEE 399 (652)
Q Consensus 320 ~~~~d~ii~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~ 399 (652)
..+||+|++|++|++. +.|+.+++... +.+..+.+. .. .+
T Consensus 207 ~~~~d~v~~l~~G~i~-~~~~~~~~~~~-----------------------~~~~~~~~~-~~----------~~----- 246 (506)
T PRK13549 207 KAISDTICVIRDGRHI-GTRPAAGMTED-----------------------DIITMMVGR-EL----------TA----- 246 (506)
T ss_pred HHhcCEEEEEECCEEe-eecccccCCHH-----------------------HHHHHhhCc-Cc----------cc-----
Confidence 9999999999999974 55654432110 000000000 00 00
Q ss_pred hhcccccccceEEecCCCCCCCCcEEEEEeeeeEeC---CeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC-
Q 006275 400 QIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYE---DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK- 475 (652)
Q Consensus 400 ~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~---~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~- 475 (652)
..+. ++ ...++++|+++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++
T Consensus 247 --~~~~---------~~-~~~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~ 314 (506)
T PRK13549 247 --LYPR---------EP-HTIGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPG 314 (506)
T ss_pred --cccc---------cc-cCCCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCC
Confidence 0000 00 112356899999999994 4579999999999999999999999999999999999998
Q ss_pred CCeeEEEECceecc-----------cceeccccc-ccCCCCCCHHHHHHHhhh---------hc--cHHHHHHHHhhCCC
Q 006275 476 PRGGEVLLGEHNVL-----------PNYFEQNQA-EALDLDKTVLETVAEAAE---------DW--RIDDIKGLLGRCNF 532 (652)
Q Consensus 476 p~~G~i~~~g~~~~-----------~~~~~~~~~-~~~~~~~tv~e~~~~~~~---------~~--~~~~~~~~L~~~~l 532 (652)
|++|+|.++|.++. .+|+.|... ..+++..|+.+|+..... .. ....+.++++.+++
T Consensus 315 ~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 394 (506)
T PRK13549 315 RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKV 394 (506)
T ss_pred CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCc
Confidence 59999999987652 245555432 235667899999975320 00 12357789999999
Q ss_pred ChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccE
Q 006275 533 KADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNR 609 (652)
Q Consensus 533 ~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~dr 609 (652)
.....++++.+|||||||||+|||||+.+|+||||||||+|||+.+++.+.++|+++ +.|||+||||++++.++|||
T Consensus 395 ~~~~~~~~~~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~ 474 (506)
T PRK13549 395 KTASPELAIARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDR 474 (506)
T ss_pred cCCCcccccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCE
Confidence 534678999999999999999999999999999999999999999999999998754 56999999999999999999
Q ss_pred EEEEeCCEEEeecCChhh
Q 006275 610 VVEVKGSNLQDYAGDYNV 627 (652)
Q Consensus 610 vi~l~~g~i~~~~g~~~~ 627 (652)
+++|++|++. ..|+.++
T Consensus 475 v~~l~~G~i~-~~~~~~~ 491 (506)
T PRK13549 475 VLVMHEGKLK-GDLINHN 491 (506)
T ss_pred EEEEECCEEE-EEecccc
Confidence 9999999987 4455554
No 12
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-81 Score=703.06 Aligned_cols=442 Identities=20% Similarity=0.345 Sum_probs=351.0
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------ceEE
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIA 164 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----------~~i~ 164 (652)
++|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..|+
T Consensus 4 ~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~ 83 (510)
T PRK09700 4 PYISMAGIGKSFGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGIG 83 (510)
T ss_pred ceEEEeeeEEEcCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCeE
Confidence 46999999999998889999999999999999999999999999999999999999999998732 2599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhh
Q 006275 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (652)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (652)
|++|++.+++..||+||+........ . +... ...+......++.++++
T Consensus 84 ~v~q~~~~~~~~tv~e~l~~~~~~~~-------~----~~~~---------------------~~~~~~~~~~~~~~~l~ 131 (510)
T PRK09700 84 IIYQELSVIDELTVLENLYIGRHLTK-------K----VCGV---------------------NIIDWREMRVRAAMMLL 131 (510)
T ss_pred EEeecccccCCCcHHHHhhhcccccc-------c----cccc---------------------cccCHHHHHHHHHHHHH
Confidence 99999888788899999853210000 0 0000 00011123446678899
Q ss_pred hcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHh
Q 006275 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQ 321 (652)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~ 321 (652)
.+|+. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|+ +.|+|||+||||++++..
T Consensus 132 ~~gl~-~~~~~~~~~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~ 210 (510)
T PRK09700 132 RVGLK-VDLDEKVANLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRR 210 (510)
T ss_pred HcCCC-CCcccchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHH
Confidence 99996 56789999999999999999999999999999999999999999999988774 358999999999999999
Q ss_pred hcCeEEEEcCCeEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHHHHHHhhh
Q 006275 322 LCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQI 401 (652)
Q Consensus 322 ~~d~ii~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~~ 401 (652)
+||+|+++++|++ .+.|+++++.... .++.+.+.... .+ .
T Consensus 211 ~~d~v~~l~~G~i-~~~g~~~~~~~~~-----------------------~~~~~~~~~~~----------~~------~ 250 (510)
T PRK09700 211 ICDRYTVMKDGSS-VCSGMVSDVSNDD-----------------------IVRLMVGRELQ----------NR------F 250 (510)
T ss_pred hCCEEEEEECCEE-eeecchhhCCHHH-----------------------HHHHhcCCCcc----------cc------c
Confidence 9999999999998 4677766543210 01111000000 00 0
Q ss_pred cccccccceEEecCCCCCCCCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEE
Q 006275 402 EKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV 481 (652)
Q Consensus 402 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i 481 (652)
.... . ++....++++|+++|+++.|+ .+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|
T Consensus 251 ~~~~--~------~~~~~~~~~~l~~~~l~~~~~--~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I 320 (510)
T PRK09700 251 NAMK--E------NVSNLAHETVFEVRNVTSRDR--KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEI 320 (510)
T ss_pred cccc--c------ccccCCCCcEEEEeCccccCC--CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeE
Confidence 0000 0 000112345899999999874 48999999999999999999999999999999999999999999
Q ss_pred EECceecc-----------cceeccccc-ccCCCCCCHHHHHHHhhh--------------h-ccHHHHHHHHhhCCCCh
Q 006275 482 LLGEHNVL-----------PNYFEQNQA-EALDLDKTVLETVAEAAE--------------D-WRIDDIKGLLGRCNFKA 534 (652)
Q Consensus 482 ~~~g~~~~-----------~~~~~~~~~-~~~~~~~tv~e~~~~~~~--------------~-~~~~~~~~~L~~~~l~~ 534 (652)
.++|.++. .+|++|... ..+++.+|+.+|+..... . .....+.++++.+++..
T Consensus 321 ~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 400 (510)
T PRK09700 321 RLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKC 400 (510)
T ss_pred EECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCC
Confidence 99997642 245555421 346678899999875321 0 01134678899999953
Q ss_pred hhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEE
Q 006275 535 DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVV 611 (652)
Q Consensus 535 ~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi 611 (652)
+..++++.+|||||||||+|||||+.+|+||||||||++||+.+++.+.++|+++ +.|||+||||++++..+|||++
T Consensus 401 ~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~ 480 (510)
T PRK09700 401 HSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIA 480 (510)
T ss_pred CCccCccccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEE
Confidence 5679999999999999999999999999999999999999999999999999764 5699999999999999999999
Q ss_pred EEeCCEEEe
Q 006275 612 EVKGSNLQD 620 (652)
Q Consensus 612 ~l~~g~i~~ 620 (652)
+|++|++..
T Consensus 481 ~l~~G~i~~ 489 (510)
T PRK09700 481 VFCEGRLTQ 489 (510)
T ss_pred EEECCEEEE
Confidence 999999874
No 13
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.1e-80 Score=699.84 Aligned_cols=443 Identities=25% Similarity=0.351 Sum_probs=350.8
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------ceE
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKI 163 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----------~~i 163 (652)
.++|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..+
T Consensus 9 ~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 9 PPLLCARSISKQYSGVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred CceEEEEeEEEEeCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 346999999999998889999999999999999999999999999999999999999999998742 249
Q ss_pred EEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHh
Q 006275 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (652)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (652)
||++|++.+++..||.||+...... ....++++.+++
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~-------------------------------------------~~~~~~~~~~~l 125 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPK-------------------------------------------RQASMQKMKQLL 125 (510)
T ss_pred EEEeccCccCCCCcHHHHhhccccc-------------------------------------------chHHHHHHHHHH
Confidence 9999999888889999998532100 001234456778
Q ss_pred hhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHH
Q 006275 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLD 320 (652)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~ 320 (652)
+.+|+. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|+ +.|+|||+||||++++.
T Consensus 126 ~~~~l~-~~~~~~~~~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~ 204 (510)
T PRK15439 126 AALGCQ-LDLDSSAGSLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIR 204 (510)
T ss_pred HHcCCC-ccccCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 888996 56789999999999999999999999999999999999999999999998874 35899999999999999
Q ss_pred hhcCeEEEEcCCeEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHHHHHHhh
Q 006275 321 QLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQ 400 (652)
Q Consensus 321 ~~~d~ii~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~ 400 (652)
.+||+|++|++|++. +.|+++++..... ++.+........ +....
T Consensus 205 ~~~d~i~~l~~G~i~-~~g~~~~~~~~~~-----------------------~~~~~~~~~~~~-------~~~~~---- 249 (510)
T PRK15439 205 QLADRISVMRDGTIA-LSGKTADLSTDDI-----------------------IQAITPAAREKS-------LSASQ---- 249 (510)
T ss_pred HhCCEEEEEECCEEE-EecChHHcCHHHH-----------------------HHHHhCcccccc-------ccccc----
Confidence 999999999999984 6788776543210 000000000000 00000
Q ss_pred hcccccccceEEec-CCCCCCCCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCee
Q 006275 401 IEKPFQRKQMKIRF-PERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGG 479 (652)
Q Consensus 401 ~~~~~~~~~~~~~~-p~~~~~~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G 479 (652)
.. ...++. +.....++.+|+++|+++ .+|+++||+|++||++||+||||||||||+++|+|+++|++|
T Consensus 250 --~~----~~~~~~~~~~~~~~~~~l~~~~l~~-----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G 318 (510)
T PRK15439 250 --KL----WLELPGNRRQQAAGAPVLTVEDLTG-----EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGG 318 (510)
T ss_pred --cc----cccccccccccCCCCceEEEeCCCC-----CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCc
Confidence 00 000000 001112456899999984 269999999999999999999999999999999999999999
Q ss_pred EEEECceecc-----------cceeccccc-ccCCCCCCHHHHHHHhh----h----hc-cHHHHHHHHhhCCCChhhhc
Q 006275 480 EVLLGEHNVL-----------PNYFEQNQA-EALDLDKTVLETVAEAA----E----DW-RIDDIKGLLGRCNFKADMLD 538 (652)
Q Consensus 480 ~i~~~g~~~~-----------~~~~~~~~~-~~~~~~~tv~e~~~~~~----~----~~-~~~~~~~~L~~~~l~~~~~~ 538 (652)
+|.++|.++. .+|++|... ..+++..|+.+|+.... . .. ....+.++++.+++.....+
T Consensus 319 ~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~ 398 (510)
T PRK15439 319 RIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKFNHAE 398 (510)
T ss_pred EEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCCCCcc
Confidence 9999997652 235555421 24666789999985320 0 01 12346788999999534679
Q ss_pred cCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeC
Q 006275 539 RKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKG 615 (652)
Q Consensus 539 ~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~ 615 (652)
+++.+|||||||||+|||||+.+|+||||||||+|||+.+++.+.++|+++ +.|||+||||++++.++|||+++|++
T Consensus 399 ~~~~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~ 478 (510)
T PRK15439 399 QAARTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQ 478 (510)
T ss_pred CccccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999998864 56999999999999999999999999
Q ss_pred CEEEeecCChhhH
Q 006275 616 SNLQDYAGDYNVC 628 (652)
Q Consensus 616 g~i~~~~g~~~~~ 628 (652)
|++.. .|..+++
T Consensus 479 G~i~~-~~~~~~~ 490 (510)
T PRK15439 479 GEISG-ALTGAAI 490 (510)
T ss_pred CEEEE-EEccccC
Confidence 99974 4555443
No 14
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=3.1e-80 Score=698.52 Aligned_cols=432 Identities=27% Similarity=0.429 Sum_probs=347.9
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCC--CCCCcEEEECC-----------------
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQE--EPDSGNVIKAK----------------- 158 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~--~p~~G~i~~~~----------------- 158 (652)
|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|++ +|++|+|.+++
T Consensus 1 l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~g~ 80 (520)
T TIGR03269 1 IEVKNLTKKFDGKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKVGE 80 (520)
T ss_pred CEEEEEEEEECCeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccccccccc
Confidence 57899999998888999999999999999999999999999999999997 79999998851
Q ss_pred ------C--------------------CceEEEEecc-CccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhH
Q 006275 159 ------S--------------------NMKIAFLSQE-FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMD 211 (652)
Q Consensus 159 ------~--------------------~~~i~~v~Q~-~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (652)
. ...++|++|+ +.+++..|+++|+...+..
T Consensus 81 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~----------------------- 137 (520)
T TIGR03269 81 PCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEE----------------------- 137 (520)
T ss_pred ccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHH-----------------------
Confidence 0 1248999997 5666678999998532110
Q ss_pred HHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCC
Q 006275 212 LMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLD 291 (652)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD 291 (652)
...+..+..+++.++++.+|+. +..++++.+|||||||||+|||||+.+|++|||||||++||
T Consensus 138 ----------------~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD 200 (520)
T TIGR03269 138 ----------------IGYEGKEAVGRAVDLIEMVQLS-HRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLD 200 (520)
T ss_pred ----------------cCCCHHHHHHHHHHHHHHcCCh-hhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCC
Confidence 0011122345677889999996 56788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006275 292 LDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIE 367 (652)
Q Consensus 292 ~~~~~~l~~~L~----~~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (652)
+.+++++.++|+ +.|+|||+||||++++.++||+|++|++|++. +.|+++++.....
T Consensus 201 ~~~~~~l~~~l~~l~~~~g~tviivtHd~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~~~~------------------ 261 (520)
T TIGR03269 201 PQTAKLVHNALEEAVKASGISMVLTSHWPEVIEDLSDKAIWLENGEIK-EEGTPDEVVAVFM------------------ 261 (520)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEeCCEEe-eecCHHHHHHHHH------------------
Confidence 999999977663 35899999999999999999999999999874 5687766532100
Q ss_pred HHHHHHHHhccCccccchhHHHHHHHHHHHHhhhcccccccceEEecCCCCCCCCcEEEEEeeeeEeC-----Ceeeeec
Q 006275 368 QTKDLINRLGAGANSGRASSAEKKLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYE-----DRLLFNR 442 (652)
Q Consensus 368 ~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~-----~~~vl~~ 442 (652)
..... . .++ ++ ...++++|+++|++++|+ .+.+|++
T Consensus 262 ---~~~~~-------------------~------~~~----------~~-~~~~~~~l~~~~l~~~~~~~~~~~~~il~~ 302 (520)
T TIGR03269 262 ---EGVSE-------------------V------EKE----------CE-VEVGEPIIKVRNVSKRYISVDRGVVKAVDN 302 (520)
T ss_pred ---hhchh-------------------h------ccc----------cc-cCCCCceEEEeccEEEeccCCCCCceEEee
Confidence 00000 0 000 00 011345899999999995 2579999
Q ss_pred eEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEEC-cee---c-------------ccceecccccccCCCCC
Q 006275 443 ANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLG-EHN---V-------------LPNYFEQNQAEALDLDK 505 (652)
Q Consensus 443 isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~-g~~---~-------------~~~~~~~~~~~~~~~~~ 505 (652)
+||+|++||+++|+||||||||||+++|+|+++|++|+|.++ |.+ + ..+|++|. ..+++.+
T Consensus 303 is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~--~~l~~~~ 380 (520)
T TIGR03269 303 VSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQE--YDLYPHR 380 (520)
T ss_pred EEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccC--cccCCCC
Confidence 999999999999999999999999999999999999999995 421 1 12455554 3466778
Q ss_pred CHHHHHHHhhh----h-ccHHHHHHHHhhCCCCh----hhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCH
Q 006275 506 TVLETVAEAAE----D-WRIDDIKGLLGRCNFKA----DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 576 (652)
Q Consensus 506 tv~e~~~~~~~----~-~~~~~~~~~L~~~~l~~----~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~ 576 (652)
|+.+|+..... . .....+.++++.+++.. +..++++.+|||||||||+|||||+.+|+||||||||++||+
T Consensus 381 tv~e~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~ 460 (520)
T TIGR03269 381 TVLDNLTEAIGLELPDELARMKAVITLKMVGFDEEKAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDP 460 (520)
T ss_pred cHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCccchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCH
Confidence 99999975321 1 11235678899999953 257899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh----cCceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 577 PSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 577 ~~~~~l~~~l~~----~~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
.+++.+.+.|++ .+.|||+||||++++..+|||+++|++|++. ..|++++..+
T Consensus 461 ~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 517 (520)
T TIGR03269 461 ITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIV-KIGDPEEIVE 517 (520)
T ss_pred HHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHHHHHh
Confidence 999999999864 3569999999999999999999999999997 4577766543
No 15
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.6e-80 Score=702.02 Aligned_cols=445 Identities=20% Similarity=0.356 Sum_probs=351.5
Q ss_pred CceEEEeEEEEeCC----eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCC-----CCcEEEECCCC------
Q 006275 96 SGVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN------ 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~i~~~~~~------ 160 (652)
++|+++|++++|++ +++|+++||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.+
T Consensus 4 ~~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~ 83 (529)
T PRK15134 4 PLLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASE 83 (529)
T ss_pred ceEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCH
Confidence 36999999999963 5799999999999999999999999999999999999986 79999987632
Q ss_pred --------ceEEEEeccCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhC
Q 006275 161 --------MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAV 230 (652)
Q Consensus 161 --------~~i~~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (652)
.+|||++|++. +.+..|+.+|+...... . ...
T Consensus 84 ~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~---------------~-----------------------~~~ 125 (529)
T PRK15134 84 QTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSL---------------H-----------------------RGM 125 (529)
T ss_pred HHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHH---------------h-----------------------cCC
Confidence 25999999974 44556888886421100 0 001
Q ss_pred ChhcHHHHHHHHhhhcCCCc--ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----
Q 006275 231 NLDTLDAKVSKLMPELGFTA--DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---- 304 (652)
Q Consensus 231 ~~~~~~~~i~~ll~~lgl~~--~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---- 304 (652)
......+++.++++.+|+.. ...++++.+|||||||||+|||||+.+|++|||||||++||+.++.++.++|++
T Consensus 126 ~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~ 205 (529)
T PRK15134 126 RREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQE 205 (529)
T ss_pred CHHHHHHHHHHHHHHCCCCChHHHHhhCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHh
Confidence 11223456778899999963 146889999999999999999999999999999999999999999999988754
Q ss_pred CCCeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccc
Q 006275 305 QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGR 384 (652)
Q Consensus 305 ~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 384 (652)
.|+|||+||||++++..+||||++|++|++. +.|...++...... .+ .......
T Consensus 206 ~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~-~~g~~~~~~~~~~~-------~~---------~~~~~~~--------- 259 (529)
T PRK15134 206 LNMGLLFITHNLSIVRKLADRVAVMQNGRCV-EQNRAATLFSAPTH-------PY---------TQKLLNS--------- 259 (529)
T ss_pred cCCeEEEEcCcHHHHHHhcCEEEEEECCEEE-EeCCHHHHhhCCCC-------HH---------HHHHHHh---------
Confidence 4899999999999999999999999999974 55665443221000 00 0000000
Q ss_pred hhHHHHHHHHHHHHhhhcccccccceEEecCCCCCCCCcEEEEEeeeeEeC-----------CeeeeeceEEEEEcCeEE
Q 006275 385 ASSAEKKLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYE-----------DRLLFNRANLTIERGEKT 453 (652)
Q Consensus 385 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~-----------~~~vl~~isl~i~~Ge~~ 453 (652)
. +.... . +. ...+.++|+++|++++|+ ++.+|+++||+|++||++
T Consensus 260 -----------------~-~~~~~---~--~~-~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~ 315 (529)
T PRK15134 260 -----------------E-PSGDP---V--PL-PEPASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETL 315 (529)
T ss_pred -----------------C-ccccc---c--cc-CCCCCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEE
Confidence 0 00000 0 00 112355799999999995 357999999999999999
Q ss_pred EEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-------------cceecccccccCCCCCCHHHHHHHhhhh---
Q 006275 454 AIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------------PNYFEQNQAEALDLDKTVLETVAEAAED--- 517 (652)
Q Consensus 454 ~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------------~~~~~~~~~~~~~~~~tv~e~~~~~~~~--- 517 (652)
||+||||||||||+++|+|+++ ++|+|+++|.++. .+|++|+....+++..|+.+|+......
T Consensus 316 ~i~G~nGsGKSTLlk~l~Gl~~-~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~ 394 (529)
T PRK15134 316 GLVGESGSGKSTTGLALLRLIN-SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQP 394 (529)
T ss_pred EEECCCCCCHHHHHHHHhCcCC-CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccc
Confidence 9999999999999999999995 8999999997642 2355554322466778999999864210
Q ss_pred ---c--cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---
Q 006275 518 ---W--RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--- 589 (652)
Q Consensus 518 ---~--~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--- 589 (652)
. ....+.++++.+++.....++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|+++
T Consensus 395 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~ 474 (529)
T PRK15134 395 TLSAAQREQQVIAVMEEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQK 474 (529)
T ss_pred cCChHHHHHHHHHHHHHcCCCHHHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHh
Confidence 1 12357789999999645679999999999999999999999999999999999999999999999999753
Q ss_pred -CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 590 -KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 590 -~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
+.|||+||||++++..+|||+++|++|++. ..|+.+++++
T Consensus 475 ~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 515 (529)
T PRK15134 475 HQLAYLFISHDLHVVRALCHQVIVLRQGEVV-EQGDCERVFA 515 (529)
T ss_pred hCCEEEEEeCCHHHHHHhcCeEEEEECCEEE-EEcCHHHHhc
Confidence 569999999999999999999999999997 4577777654
No 16
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=2.6e-80 Score=696.16 Aligned_cols=436 Identities=23% Similarity=0.326 Sum_probs=344.3
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCC--CCcEEEECCCC-----------ceEE
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP--DSGNVIKAKSN-----------MKIA 164 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p--~~G~i~~~~~~-----------~~i~ 164 (652)
|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++| ++|+|.++|.. ..|+
T Consensus 2 l~i~~l~~~~~~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 81 (500)
T TIGR02633 2 LEMKGIVKTFGGVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAGIV 81 (500)
T ss_pred EEEEeEEEEeCCeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCCEE
Confidence 7899999999988899999999999999999999999999999999999987 79999998732 3599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhh
Q 006275 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (652)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (652)
|++|++.+++..|+.||+....... ... . .........++.++++
T Consensus 82 ~v~q~~~~~~~~tv~~~l~~~~~~~-------------~~~-~---------------------~~~~~~~~~~~~~~l~ 126 (500)
T TIGR02633 82 IIHQELTLVPELSVAENIFLGNEIT-------------LPG-G---------------------RMAYNAMYLRAKNLLR 126 (500)
T ss_pred EEeeccccCCCCcHHHHHHhhcccc-------------ccc-c---------------------ccCHHHHHHHHHHHHH
Confidence 9999998878889999985321000 000 0 0001122345677889
Q ss_pred hcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHh
Q 006275 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQ 321 (652)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~ 321 (652)
.+|+.....++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|+ +.|+|||+||||++++..
T Consensus 127 ~~~l~~~~~~~~~~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~ 206 (500)
T TIGR02633 127 ELQLDADNVTRPVGDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKA 206 (500)
T ss_pred HcCCCCCcccCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHH
Confidence 99986433467799999999999999999999999999999999999999999988864 468899999999999999
Q ss_pred hcCeEEEEcCCeEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHHHHHHhhh
Q 006275 322 LCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQI 401 (652)
Q Consensus 322 ~~d~ii~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~~ 401 (652)
+||+|++|++|++. ..|+..++... ..+..+.+.. .
T Consensus 207 ~~d~i~~l~~G~i~-~~~~~~~~~~~-----------------------~~~~~~~~~~--------------------~ 242 (500)
T TIGR02633 207 VCDTICVIRDGQHV-ATKDMSTMSED-----------------------DIITMMVGRE--------------------I 242 (500)
T ss_pred hCCEEEEEeCCeEe-eecCcccCCHH-----------------------HHHHHHhCcc--------------------c
Confidence 99999999999974 44443221100 0000000000 0
Q ss_pred cccccccceEEecCCCCCCCCcEEEEEeeeeEe---CCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCC-C
Q 006275 402 EKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGY---EDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-R 477 (652)
Q Consensus 402 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y---~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p-~ 477 (652)
... .. ......++.+|+++|++++| +++.+|+++||+|++||+++|+||||||||||+++|+|+++| +
T Consensus 243 ~~~-------~~-~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~ 314 (500)
T TIGR02633 243 TSL-------YP-HEPHEIGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKF 314 (500)
T ss_pred ccc-------cc-ccccCCCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCC
Confidence 000 00 00001234589999999999 345799999999999999999999999999999999999985 8
Q ss_pred eeEEEECceecc-----------cceeccccc-ccCCCCCCHHHHHHHhhh----h----c---cHHHHHHHHhhCCCCh
Q 006275 478 GGEVLLGEHNVL-----------PNYFEQNQA-EALDLDKTVLETVAEAAE----D----W---RIDDIKGLLGRCNFKA 534 (652)
Q Consensus 478 ~G~i~~~g~~~~-----------~~~~~~~~~-~~~~~~~tv~e~~~~~~~----~----~---~~~~~~~~L~~~~l~~ 534 (652)
+|+|.++|.++. .+|++|... ..+++.+|+.+|+..... . . ....+.++++++++..
T Consensus 315 ~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 394 (500)
T TIGR02633 315 EGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKT 394 (500)
T ss_pred CeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccC
Confidence 999999997652 245555432 246677899999875310 0 0 1234778999999953
Q ss_pred hhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEE
Q 006275 535 DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVV 611 (652)
Q Consensus 535 ~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi 611 (652)
...++++.+|||||||||+|||||+.+|+||||||||++||+.+++.+.+.|+++ +.|||+||||++++.++|||++
T Consensus 395 ~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~ 474 (500)
T TIGR02633 395 ASPFLPIGRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVL 474 (500)
T ss_pred CCccCccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEE
Confidence 4578999999999999999999999999999999999999999999999888754 5699999999999999999999
Q ss_pred EEeCCEEEe
Q 006275 612 EVKGSNLQD 620 (652)
Q Consensus 612 ~l~~g~i~~ 620 (652)
+|++|++..
T Consensus 475 ~l~~G~i~~ 483 (500)
T TIGR02633 475 VIGEGKLKG 483 (500)
T ss_pred EEECCEEEE
Confidence 999999874
No 17
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2.3e-80 Score=696.28 Aligned_cols=437 Identities=23% Similarity=0.371 Sum_probs=347.0
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------ceEEE
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAF 165 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----------~~i~~ 165 (652)
+|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|
T Consensus 4 ~i~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 83 (501)
T PRK10762 4 LLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGIGI 83 (501)
T ss_pred eEEEeeeEEEeCCeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCEEE
Confidence 6999999999998889999999999999999999999999999999999999999999998732 25999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh
Q 006275 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (652)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (652)
++|++.+++..||+||+....... ... ...+......++.++++.
T Consensus 84 v~q~~~~~~~~tv~e~l~~~~~~~-----------~~~------------------------~~~~~~~~~~~~~~~l~~ 128 (501)
T PRK10762 84 IHQELNLIPQLTIAENIFLGREFV-----------NRF------------------------GRIDWKKMYAEADKLLAR 128 (501)
T ss_pred EEcchhccCCCcHHHHhhhccccc-----------ccc------------------------CccCHHHHHHHHHHHHHH
Confidence 999998878899999985321000 000 000011223456778899
Q ss_pred cCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhh
Q 006275 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQL 322 (652)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~ 322 (652)
+|+. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|+ +.|+|||+||||++++..+
T Consensus 129 ~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~ 207 (501)
T PRK10762 129 LNLR-FSSDKLVGELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEI 207 (501)
T ss_pred cCCC-CCccCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHh
Confidence 9996 56788999999999999999999999999999999999999999999987764 3588999999999999999
Q ss_pred cCeEEEEcCCeEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHHHHHHhhhc
Q 006275 323 CTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQIE 402 (652)
Q Consensus 323 ~d~ii~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~~~ 402 (652)
||+|++|++|++. ..|...++... ..++...+. . +.. .
T Consensus 208 ~d~i~~l~~G~i~-~~~~~~~~~~~-----------------------~~~~~~~~~----~----------~~~----~ 245 (501)
T PRK10762 208 CDDVTVFRDGQFI-AEREVADLTED-----------------------SLIEMMVGR----K----------LED----Q 245 (501)
T ss_pred CCEEEEEeCCEEE-EecCcCcCCHH-----------------------HHHHHhcCC----C----------ccc----c
Confidence 9999999999974 45544332110 000000000 0 000 0
Q ss_pred ccccccceEEecCCCCCCCCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEE
Q 006275 403 KPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVL 482 (652)
Q Consensus 403 ~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~ 482 (652)
.+ .. + ..++.++++++|+++ .+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.
T Consensus 246 ~~------~~--~--~~~~~~~l~~~~l~~-----~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~ 310 (501)
T PRK10762 246 YP------RL--D--KAPGEVRLKVDNLSG-----PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVT 310 (501)
T ss_pred cc------cc--c--cCCCCcEEEEeCccc-----CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEE
Confidence 00 00 0 012345799999985 379999999999999999999999999999999999999999999
Q ss_pred ECceecc-----------cceeccccc-ccCCCCCCHHHHHHHhhh----h--------ccHHHHHHHHhhCCCChhhhc
Q 006275 483 LGEHNVL-----------PNYFEQNQA-EALDLDKTVLETVAEAAE----D--------WRIDDIKGLLGRCNFKADMLD 538 (652)
Q Consensus 483 ~~g~~~~-----------~~~~~~~~~-~~~~~~~tv~e~~~~~~~----~--------~~~~~~~~~L~~~~l~~~~~~ 538 (652)
++|.++. .+|++|... ..+++..|+.+|+..... . .....+.++++.+++.....+
T Consensus 311 ~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~ 390 (501)
T PRK10762 311 LDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSME 390 (501)
T ss_pred ECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCcc
Confidence 9997652 245555532 235677899999875311 0 112347789999999534679
Q ss_pred cCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeC
Q 006275 539 RKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKG 615 (652)
Q Consensus 539 ~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~ 615 (652)
+++.+|||||||||+|||||+.+|++|||||||+|||+.+++.+.++|+++ +.|||+||||++++.++||++++|++
T Consensus 391 ~~~~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~ 470 (501)
T PRK10762 391 QAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHE 470 (501)
T ss_pred CchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999999875 35999999999999999999999999
Q ss_pred CEEEeecCChhh
Q 006275 616 SNLQDYAGDYNV 627 (652)
Q Consensus 616 g~i~~~~g~~~~ 627 (652)
|++.. .|+.++
T Consensus 471 G~i~~-~~~~~~ 481 (501)
T PRK10762 471 GRISG-EFTREQ 481 (501)
T ss_pred CEEEE-Eecccc
Confidence 99873 454443
No 18
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-80 Score=694.00 Aligned_cols=439 Identities=22% Similarity=0.338 Sum_probs=345.9
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------ceEE
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIA 164 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----------~~i~ 164 (652)
++|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..|+
T Consensus 3 ~~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i~ 82 (501)
T PRK11288 3 PYLSFDGIGKTFPGVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGVA 82 (501)
T ss_pred ceEEEeeeEEEECCEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCEE
Confidence 36999999999998889999999999999999999999999999999999999999999998732 2599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhh
Q 006275 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (652)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (652)
|++|++.+++..||.+|+........ . ...+......++.++++
T Consensus 83 ~v~q~~~~~~~~tv~~~l~~~~~~~~------------~------------------------~~~~~~~~~~~~~~~l~ 126 (501)
T PRK11288 83 IIYQELHLVPEMTVAENLYLGQLPHK------------G------------------------GIVNRRLLNYEAREQLE 126 (501)
T ss_pred EEEechhccCCCCHHHHHHhcccccc------------c------------------------CCCCHHHHHHHHHHHHH
Confidence 99999988788899999853210000 0 00011123445677889
Q ss_pred hcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHh
Q 006275 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQ 321 (652)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~ 321 (652)
.+|+. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|+ +.|+|||+||||++++..
T Consensus 127 ~~~l~-~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~ 205 (501)
T PRK11288 127 HLGVD-IDPDTPLKYLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFA 205 (501)
T ss_pred HcCCC-CCcCCchhhCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHH
Confidence 99996 56788899999999999999999999999999999999999999999998875 458999999999999999
Q ss_pred hcCeEEEEcCCeEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHHHHHHhhh
Q 006275 322 LCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQI 401 (652)
Q Consensus 322 ~~d~ii~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~~ 401 (652)
+||+|++|++|++. ..+. .+..... ....+.+.... .
T Consensus 206 ~~d~i~~l~~G~i~-~~~~--~~~~~~~--------------------~~~~~~~~~~~--------------------~ 242 (501)
T PRK11288 206 LCDAITVFKDGRYV-ATFD--DMAQVDR--------------------DQLVQAMVGRE--------------------I 242 (501)
T ss_pred hCCEEEEEECCEEE-eecC--ccccCCH--------------------HHHHHHhcCCC--------------------c
Confidence 99999999999974 2221 1100000 00000010000 0
Q ss_pred cccccccceEEecCCCCCCCCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEE
Q 006275 402 EKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV 481 (652)
Q Consensus 402 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i 481 (652)
... ...++ ...++..++++|+++. .+++|+||+|++||++||+||||||||||+++|+|+++|++|+|
T Consensus 243 ~~~-------~~~~~-~~~~~~~l~~~~~~~~----~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i 310 (501)
T PRK11288 243 GDI-------YGYRP-RPLGEVRLRLDGLKGP----GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQV 310 (501)
T ss_pred ccc-------ccccc-cCCCCcEEEEeccccC----CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceE
Confidence 000 00000 1123457999999842 58999999999999999999999999999999999999999999
Q ss_pred EECceecc-----------cceeccccc-ccCCCCCCHHHHHHHhhh-----------h-ccHHHHHHHHhhCCCChhhh
Q 006275 482 LLGEHNVL-----------PNYFEQNQA-EALDLDKTVLETVAEAAE-----------D-WRIDDIKGLLGRCNFKADML 537 (652)
Q Consensus 482 ~~~g~~~~-----------~~~~~~~~~-~~~~~~~tv~e~~~~~~~-----------~-~~~~~~~~~L~~~~l~~~~~ 537 (652)
.++|+++. .+|++|+.. ..+++..|+.+|+..... . ...+.+.++++.+++..+..
T Consensus 311 ~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 390 (501)
T PRK11288 311 YLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSR 390 (501)
T ss_pred EECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCc
Confidence 99987652 134555432 236677899999875321 0 11235778999999954567
Q ss_pred ccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEe
Q 006275 538 DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVK 614 (652)
Q Consensus 538 ~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~ 614 (652)
++++.+|||||||||+|||||+.+|+||||||||+|||+.+++.+.++|+++ +.|||+||||++++..+||++++|+
T Consensus 391 ~~~~~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~ 470 (501)
T PRK11288 391 EQLIMNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMR 470 (501)
T ss_pred cCccccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999998654 5699999999999999999999999
Q ss_pred CCEEEeecCChhh
Q 006275 615 GSNLQDYAGDYNV 627 (652)
Q Consensus 615 ~g~i~~~~g~~~~ 627 (652)
+|++.. .|..++
T Consensus 471 ~g~i~~-~~~~~~ 482 (501)
T PRK11288 471 EGRIAG-ELAREQ 482 (501)
T ss_pred CCEEEE-EEcccc
Confidence 999873 455544
No 19
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=4.5e-79 Score=684.51 Aligned_cols=434 Identities=22% Similarity=0.270 Sum_probs=334.2
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEEEE
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~~v 166 (652)
+|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 3 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~~~ 82 (490)
T PRK10938 3 SLQISQGTFRLSDTKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVSDE 82 (490)
T ss_pred eEEEEeEEEEcCCeeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhcee
Confidence 5999999999988889999999999999999999999999999999999999999999987632 138999
Q ss_pred eccCccCC--------CCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 167 SQEFEVSM--------SRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 167 ~Q~~~~~~--------~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
+|++.... ..|+.+++... ....++
T Consensus 83 ~q~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~ 115 (490)
T PRK10938 83 WQRNNTDMLSPGEDDTGRTTAEIIQDE-----------------------------------------------VKDPAR 115 (490)
T ss_pred ccCcchhhcccchhhccccHHHhcccc-----------------------------------------------hhHHHH
Confidence 99864311 23444443200 011334
Q ss_pred HHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecC
Q 006275 239 VSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHD 315 (652)
Q Consensus 239 i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd 315 (652)
+.++++.+|+. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|++ .|+|||+||||
T Consensus 116 ~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~ 194 (490)
T PRK10938 116 CEQLAQQFGIT-ALLDRRFKYLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNR 194 (490)
T ss_pred HHHHHHHcCCH-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 56778888986 567899999999999999999999999999999999999999999999988743 48899999999
Q ss_pred HHHHHhhcCeEEEEcCCeEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHHH
Q 006275 316 RAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERL 395 (652)
Q Consensus 316 ~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l 395 (652)
++++.++||+|++|++|++. +.|+++++..... +.++... +++
T Consensus 195 ~~~~~~~~d~v~~l~~G~i~-~~~~~~~~~~~~~-----------------------~~~~~~~-------------~~~ 237 (490)
T PRK10938 195 FDEIPDFVQFAGVLADCTLA-ETGEREEILQQAL-----------------------VAQLAHS-------------EQL 237 (490)
T ss_pred HHHHHhhCCEEEEEECCEEE-EeCCHHHHhcchh-----------------------hhhhhhh-------------hcc
Confidence 99999999999999999984 5677554322100 0000000 000
Q ss_pred HHHhhhcccccccceEEecCCCCCCCCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC
Q 006275 396 QEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK 475 (652)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~ 475 (652)
.. ...+..... ..+.......++|+++|+++.|+++.+|+++||+|++||+++|+||||||||||+++|+|+.+
T Consensus 238 ~~---~~~~~~~~~---~~~~~~~~~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~ 311 (490)
T PRK10938 238 EG---VQLPEPDEP---SARHALPANEPRIVLNNGVVSYNDRPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHP 311 (490)
T ss_pred Cc---cccCccccc---ccccccCCCCceEEEeceEEEECCeeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC
Confidence 00 000000000 000001124568999999999988889999999999999999999999999999999999887
Q ss_pred C-CeeEEEECceecc-----------cceecccccccCCCCCCHHHHHHHhhh----------hccHHHHHHHHhhCCCC
Q 006275 476 P-RGGEVLLGEHNVL-----------PNYFEQNQAEALDLDKTVLETVAEAAE----------DWRIDDIKGLLGRCNFK 533 (652)
Q Consensus 476 p-~~G~i~~~g~~~~-----------~~~~~~~~~~~~~~~~tv~e~~~~~~~----------~~~~~~~~~~L~~~~l~ 533 (652)
| ++|+|.++|.++. .+|+.|..........++.+++..... ......+.++++.+++.
T Consensus 312 ~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 391 (490)
T PRK10938 312 QGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGID 391 (490)
T ss_pred cccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCc
Confidence 6 6999999986531 234444321111123456665543210 01123577899999996
Q ss_pred hhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---Cc-eEEEEecCHHHHHh-hcc
Q 006275 534 ADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KG-TVITVSHDRYFVKQ-IVN 608 (652)
Q Consensus 534 ~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~-tvi~vsHd~~~i~~-~~d 608 (652)
....++++.+|||||||||+|||||+.+|+||||||||+|||+.+++.+.++|+++ +. |||+||||++++.. +||
T Consensus 392 ~~~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d 471 (490)
T PRK10938 392 KRTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITH 471 (490)
T ss_pred hhhccCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhhe
Confidence 43678999999999999999999999999999999999999999999999999875 33 69999999999987 599
Q ss_pred EEEEEeCCEEEee
Q 006275 609 RVVEVKGSNLQDY 621 (652)
Q Consensus 609 rvi~l~~g~i~~~ 621 (652)
++++|++|+++++
T Consensus 472 ~v~~l~~G~i~~~ 484 (490)
T PRK10938 472 RLEFVPDGDIYRY 484 (490)
T ss_pred eEEEecCCceEEe
Confidence 9999999998764
No 20
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-79 Score=684.35 Aligned_cols=430 Identities=20% Similarity=0.312 Sum_probs=337.9
Q ss_pred EEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------ceEEEEec
Q 006275 100 LENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAFLSQ 168 (652)
Q Consensus 100 v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----------~~i~~v~Q 168 (652)
++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|
T Consensus 1 ~~nl~~~~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q 80 (491)
T PRK10982 1 MSNISKSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMVHQ 80 (491)
T ss_pred CCceEEEeCCEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEEec
Confidence 3689999998889999999999999999999999999999999999999999999998742 25999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCC
Q 006275 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (652)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (652)
++.+++..||++|+....... ... ..+.....+++.++++.+|+
T Consensus 81 ~~~~~~~~tv~~~l~~~~~~~--------------~~~----------------------~~~~~~~~~~~~~~l~~~~l 124 (491)
T PRK10982 81 ELNLVLQRSVMDNMWLGRYPT--------------KGM----------------------FVDQDKMYRDTKAIFDELDI 124 (491)
T ss_pred ccccccCCCHHHHhhcccccc--------------ccc----------------------ccCHHHHHHHHHHHHHHcCC
Confidence 998778899999985321000 000 00011123456678888898
Q ss_pred CcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCe
Q 006275 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTK 325 (652)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~d~ 325 (652)
. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|+ +.|+|||+||||++++..+||+
T Consensus 125 ~-~~~~~~~~~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~ 203 (491)
T PRK10982 125 D-IDPRAKVATLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDE 203 (491)
T ss_pred C-CCccCchhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCE
Confidence 6 46788899999999999999999999999999999999999999999988774 3589999999999999999999
Q ss_pred EEEEcCCeEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHHHHHHhhhcccc
Q 006275 326 IVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQIEKPF 405 (652)
Q Consensus 326 ii~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 405 (652)
|++|++|++. ..|+..+.... +..+.+.+. . ....
T Consensus 204 i~~l~~G~i~-~~~~~~~~~~~-----------------------~~~~~~~~~-~-------------------~~~~- 238 (491)
T PRK10982 204 ITILRDGQWI-ATQPLAGLTMD-----------------------KIIAMMVGR-S-------------------LTQR- 238 (491)
T ss_pred EEEEECCEEE-eecChhhCCHH-----------------------HHHHHHhCC-C-------------------cccc-
Confidence 9999999974 55553332100 001111000 0 0000
Q ss_pred cccceEEecCCCCCCCCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECc
Q 006275 406 QRKQMKIRFPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGE 485 (652)
Q Consensus 406 ~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g 485 (652)
+. +....+++++|+++|+++.| +.+|+++||+|++||++||+||||||||||+++|+|+.+|++|+|.++|
T Consensus 239 ------~~-~~~~~~~~~~i~~~~l~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g 309 (491)
T PRK10982 239 ------FP-DKENKPGEVILEVRNLTSLR--QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHG 309 (491)
T ss_pred ------cc-cccCCCCCcEEEEeCccccc--CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECC
Confidence 00 00011234579999999885 4699999999999999999999999999999999999999999999999
Q ss_pred eecc-----------cceeccccc-ccCCCCCCHHHH-----HHHhhhh-------ccHHHHHHHHhhCCCChhhhccCc
Q 006275 486 HNVL-----------PNYFEQNQA-EALDLDKTVLET-----VAEAAED-------WRIDDIKGLLGRCNFKADMLDRKV 541 (652)
Q Consensus 486 ~~~~-----------~~~~~~~~~-~~~~~~~tv~e~-----~~~~~~~-------~~~~~~~~~L~~~~l~~~~~~~~~ 541 (652)
.++. .+|++|... ..+++..++.+| +...... .....+.++++.+++..+..++++
T Consensus 310 ~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 389 (491)
T PRK10982 310 KKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQI 389 (491)
T ss_pred EECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCccccc
Confidence 7653 234444322 234556666655 3221110 012346788999998534579999
Q ss_pred CCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHh---cCceEEEEecCHHHHHhhccEEEEEeCCEE
Q 006275 542 SLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISE---YKGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (652)
Q Consensus 542 ~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~---~~~tvi~vsHd~~~i~~~~drvi~l~~g~i 618 (652)
.+|||||||||+|||||+.+|+||||||||+|||+.+++.+.++|++ .+.|||+||||++++..+|||+++|++|++
T Consensus 390 ~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i 469 (491)
T PRK10982 390 GSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLV 469 (491)
T ss_pred ccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999998864 467999999999999999999999999999
Q ss_pred Ee
Q 006275 619 QD 620 (652)
Q Consensus 619 ~~ 620 (652)
..
T Consensus 470 ~~ 471 (491)
T PRK10982 470 AG 471 (491)
T ss_pred EE
Confidence 74
No 21
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.4e-76 Score=684.51 Aligned_cols=541 Identities=24% Similarity=0.402 Sum_probs=374.8
Q ss_pred ccchhhhHHHHhhhhhHHhhhccCccccccccccccCCCCCCCCCCCceEEEeEEEEeCCee---eeeeeeEEEECCCEE
Q 006275 50 SAATVEKKSIAKAQSDVESLFSSSADEFENKKYSNKQSNTGASSISSGVKLENISKSYKGVT---VLKDVTWEVKKGEKV 126 (652)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~ls~~y~~~~---vL~~vsl~i~~Ge~~ 126 (652)
....+...++..++.++..+++..++.+..+.....+ .........|+++||+|+|+.++ +|+++||.|++|+.+
T Consensus 305 gqa~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~--~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~v 382 (1228)
T KOG0055|consen 305 GQASPHLSAFAKARAAAYRIFETIDRKPSIDPYSKGG--RVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTV 382 (1228)
T ss_pred hccccchHHHhccccchHHHHHHhcCCCCCCcccccC--CcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEE
Confidence 3455566778888888888888776655444443111 12233566799999999998764 999999999999999
Q ss_pred EEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCc----------eEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHH
Q 006275 127 GLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM----------KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKL 196 (652)
Q Consensus 127 ~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~----------~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~ 196 (652)
||||||||||||++++|.+++.|++|+|.++|.+. +||.|+|+|.+ ++.||+|||..+-.+. ..
T Consensus 383 alVG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvl-F~~tI~eNI~~G~~da-----t~ 456 (1228)
T KOG0055|consen 383 ALVGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVL-FATTIRENIRYGKPDA-----TR 456 (1228)
T ss_pred EEECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhh-hcccHHHHHhcCCCcc-----cH
Confidence 99999999999999999999999999999998754 59999999954 8999999997543220 01
Q ss_pred HHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHcc
Q 006275 197 ERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQ 276 (652)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~ 276 (652)
+++.++... ....+++..+++ |+.+..+++ ..+|||||||||||||||+.
T Consensus 457 ~~i~~a~k~-ana~~fi~~lp~----------------------------g~~T~vge~-g~qLSGGQKQRIAIARalv~ 506 (1228)
T KOG0055|consen 457 EEIEEAAKA-ANAHDFILKLPD----------------------------GYDTLVGER-GVQLSGGQKQRIAIARALVR 506 (1228)
T ss_pred HHHHHHHHH-ccHHHHHHhhHH----------------------------hhcccccCC-CCCCChHHHHHHHHHHHHHh
Confidence 112222111 111222222222 222223333 46699999999999999999
Q ss_pred CCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHHHHHHH---H
Q 006275 277 DPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAA---W 351 (652)
Q Consensus 277 ~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~~~~~~---~ 351 (652)
+|+|||||||||+||+++++.+.+.|.+ .|+|.|+|+|++..+.. ||+|+++++|+++ ..|+.++++..... +
T Consensus 507 ~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrn-aD~I~v~~~G~Iv-E~G~h~ELi~~~G~Y~~l 584 (1228)
T KOG0055|consen 507 NPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRN-ADKIAVMEEGKIV-EQGTHDELIALGGIYSSL 584 (1228)
T ss_pred CCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhc-cCEEEEEECCEEE-EecCHHHHHhccchHHHH
Confidence 9999999999999999999999999864 58999999999999976 9999999999984 55655544331000 0
Q ss_pred HHH----------------------H-------------------------H-----H-------------------HHH
Q 006275 352 IES----------------------Q-------------------------Y-----A-------------------AWE 360 (652)
Q Consensus 352 ~~~----------------------~-------------------------~-----~-------------------~~~ 360 (652)
+.. . . . .|.
T Consensus 585 v~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~s~~~i~k~~~pe~~ 664 (1228)
T KOG0055|consen 585 VRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNRSNLLSVKPEGEDPEEPVSEEDEKVSFWRIFKLNKPEWP 664 (1228)
T ss_pred HHHHhhhhhhhccccccchhhhhhhccccccccccccCCccccccccccccccccccccccccccccHHHHHHhccchhH
Confidence 000 0 0 0 000
Q ss_pred -----------------------------------HHHHH----H--------------------------HHHHHH---
Q 006275 361 -----------------------------------KQQRE----I--------------------------EQTKDL--- 372 (652)
Q Consensus 361 -----------------------------------~~~~~----~--------------------------~~~~~~--- 372 (652)
...+. + +++..+
T Consensus 665 ~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~ 744 (1228)
T KOG0055|consen 665 YLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRS 744 (1228)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0 000000
Q ss_pred -----------------------HHHhccCccccch--------------------------------------------
Q 006275 373 -----------------------INRLGAGANSGRA-------------------------------------------- 385 (652)
Q Consensus 373 -----------------------~~~l~~~~~~~~~-------------------------------------------- 385 (652)
..||..+++.-++
T Consensus 745 ~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~ 824 (1228)
T KOG0055|consen 745 MMFRALLRQEVGWFDDPENSGALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILS 824 (1228)
T ss_pred HHHHHHHcCCCcccCCCccchHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000000000
Q ss_pred ---------------hH--------HHHHHHHHH------H-------Hh-hhcccc-----------------------
Q 006275 386 ---------------SS--------AEKKLERLQ------E-------EE-QIEKPF----------------------- 405 (652)
Q Consensus 386 ---------------~~--------~~~~l~~l~------~-------~~-~~~~~~----------------------- 405 (652)
.. +...++.++ . +. ...+|.
T Consensus 825 ~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~ 904 (1228)
T KOG0055|consen 825 GYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFF 904 (1228)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000000000 0 00 000000
Q ss_pred -------------------------------------------------------------cccceEEecCC-CC---CC
Q 006275 406 -------------------------------------------------------------QRKQMKIRFPE-RG---RS 420 (652)
Q Consensus 406 -------------------------------------------------------------~~~~~~~~~p~-~~---~~ 420 (652)
+++ .++..+. .+ ..
T Consensus 905 ~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~-~~i~~~~~~~~~~~~ 983 (1228)
T KOG0055|consen 905 VYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEILDRK-PTIDPDSTSGGKLPN 983 (1228)
T ss_pred HHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhcCC-CCCCCCCCCCCcccc
Confidence 000 0011000 11 01
Q ss_pred CCcEEEEEeeeeEeCCe---eeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceeccc-------
Q 006275 421 GRSVVTIKNLEFGYEDR---LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP------- 490 (652)
Q Consensus 421 ~~~~i~~~~v~~~y~~~---~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~------- 490 (652)
-++-|+++||+|+|+.+ +||+|+||+|++|+.+|||||+||||||.+.+|.++++|++|.|.+||.++..
T Consensus 984 ~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR 1063 (1228)
T KOG0055|consen 984 VKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLR 1063 (1228)
T ss_pred ceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHH
Confidence 13459999999999865 58999999999999999999999999999999999999999999999998742
Q ss_pred ---ceecccccccCCCCCCHHHHHHHhhhhccHHHHHHHHhhCCCCh------hhhcc----CcCCCCHHHHHHHHHHHH
Q 006275 491 ---NYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKA------DMLDR----KVSLLSGGEKARLAFCKF 557 (652)
Q Consensus 491 ---~~~~~~~~~~~~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~------~~~~~----~~~~LSgGqrqrv~LAra 557 (652)
+.+.|. +..++.|++||+.++......+++.++++..+... +-.|. +..+||||||||+|||||
T Consensus 1064 ~~i~lVsQE---P~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARA 1140 (1228)
T KOG0055|consen 1064 KQIGLVSQE---PVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARA 1140 (1228)
T ss_pred HhcceeccC---chhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHH
Confidence 233333 34568999999999843455666666666554421 11233 345999999999999999
Q ss_pred HccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhhcCCc
Q 006275 558 MVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTSFSPF 635 (652)
Q Consensus 558 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~~~~~ 635 (652)
++++|+||||||.||+||.++.+.++++|.+. +.|+|+|+|++.++.+ ||.|+|+++|+|++ .|+.++.++..-.+
T Consensus 1141 ilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqn-aD~I~Vi~~G~VvE-~GtH~~L~~~~G~Y 1218 (1228)
T KOG0055|consen 1141 ILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQN-ADVIAVLKNGKVVE-QGTHDELLAKRGIY 1218 (1228)
T ss_pred HHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhc-CCEEEEEECCEEEe-cccHHHHHhCCCch
Confidence 99999999999999999999999999999976 5699999999999987 99999999999985 69999888765554
Q ss_pred c
Q 006275 636 L 636 (652)
Q Consensus 636 ~ 636 (652)
+
T Consensus 1219 ~ 1219 (1228)
T KOG0055|consen 1219 F 1219 (1228)
T ss_pred H
Confidence 4
No 22
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.8e-75 Score=686.47 Aligned_cols=553 Identities=24% Similarity=0.401 Sum_probs=409.2
Q ss_pred cccccccccccccccccCCC--ccccccccchhhhHHHHhhhhhHHhhhccCccccccccccccCCCCCCCCCCCceEEE
Q 006275 24 PFASAKSFTNSLNFTKKQRP--RITCQVSAATVEKKSIAKAQSDVESLFSSSADEFENKKYSNKQSNTGASSISSGVKLE 101 (652)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 101 (652)
.+++...|.....|+.+++| .+|..++..++..+|+.+ +.+++..++........ .........++++
T Consensus 453 ~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~R----i~~fl~~~e~~~~~~~~------~~~~~~~~~i~i~ 522 (1381)
T KOG0054|consen 453 LLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKR----LKEFLLSEELDPDSVER------SPDEAGENAIEIK 522 (1381)
T ss_pred cccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHhcCcccCcccccc------CCCCCCCceEEEe
Confidence 45566788888888888887 688899999999999999 77777665433211110 1112334569999
Q ss_pred eEEEEeCC---eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccCccCCCCCH
Q 006275 102 NISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTV 178 (652)
Q Consensus 102 ~ls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~~~~~~~Tv 178 (652)
|.+|+|++ .+.|+||||+|++|+.+||||+.|||||+||.+|+|+++..+|+|.++| .++||+|.||+ ++.||
T Consensus 523 ~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~g---siaYv~Q~pWI-~ngTv 598 (1381)
T KOG0054|consen 523 NGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNG---SVAYVPQQPWI-QNGTV 598 (1381)
T ss_pred eeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcC---eEEEeccccHh-hCCcH
Confidence 99999965 3499999999999999999999999999999999999999999999875 59999999998 78999
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccccCCCC
Q 006275 179 REEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVA 258 (652)
Q Consensus 179 ~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~ 258 (652)
+|||. |+.+++. + +|..++++|.++++++-+ . .|..++.++| ..
T Consensus 599 reNIL--FG~~~d~----~---------------------------rY~~Vi~aC~L~~Dle~L-p-~GD~TeIGEr-Gi 642 (1381)
T KOG0054|consen 599 RENIL--FGSPYDE----E---------------------------RYDKVIKACALKKDLEIL-P-FGDLTEIGER-GI 642 (1381)
T ss_pred HHhhh--cCccccH----H---------------------------HHHHHHHHccCHhHHhhc-C-CCCcceecCC-cc
Confidence 99997 3332221 2 344445555666555433 2 2444566665 79
Q ss_pred CCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHH-Hcc--CCCeEEEEecCHHHHHhhcCeEEEEcCCeEE
Q 006275 259 SFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGY-LGK--QDVPMVIISHDRAFLDQLCTKIVETEMGVSR 335 (652)
Q Consensus 259 ~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~-L~~--~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~ 335 (652)
+|||||||||+||||+|+++||+|||+|+|++|.++.++|++- ++. .++|+|+|||.++++. -||.|++|++|++
T Consensus 643 nLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~-~ad~Iivl~~G~I- 720 (1381)
T KOG0054|consen 643 NLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLP-HADQIIVLKDGKI- 720 (1381)
T ss_pred CCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhh-hCCEEEEecCCeE-
Confidence 9999999999999999999999999999999999999988753 322 3799999999999995 5999999999998
Q ss_pred EecCChHHHHHHH-----------------------------------H-H-----------------------------
Q 006275 336 TYEGNYSQYVLEK-----------------------------------A-A----------------------------- 350 (652)
Q Consensus 336 ~~~g~~~~~~~~~-----------------------------------~-~----------------------------- 350 (652)
...|+|+++.... . .
T Consensus 721 ~~~Gty~el~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~G~ 800 (1381)
T KOG0054|consen 721 VESGTYEELLKSGGDFAELAHEEESEQEEEASEKDLESGESSRESESRSLESLSSEEEKSKDEKEEEDKLVQEEERETGK 800 (1381)
T ss_pred ecccCHHHHHhcchhHHHHhhccchhhccccccccccccccccchhhhhhhhhcccccccccccchhhHHHHHHHHhcCE
Confidence 5789888766300 0 0
Q ss_pred --------------------------------------HHHHHH------H-----H--HH-------------------
Q 006275 351 --------------------------------------WIESQY------A-----A--WE------------------- 360 (652)
Q Consensus 351 --------------------------------------~~~~~~------~-----~--~~------------------- 360 (652)
|+..+. . . +-
T Consensus 801 v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~ 880 (1381)
T KOG0054|consen 801 VSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSF 880 (1381)
T ss_pred eeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 0 0 00
Q ss_pred --------------------------------------------------------------------------------
Q 006275 361 -------------------------------------------------------------------------------- 360 (652)
Q Consensus 361 -------------------------------------------------------------------------------- 360 (652)
T Consensus 881 ~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~f 960 (1381)
T KOG0054|consen 881 LFAKGGLKASRKLHDKLLNSILRAPMSFFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWF 960 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHH
Confidence
Q ss_pred ------------------------------------------------------HHHHHHHHHHHHHH------------
Q 006275 361 ------------------------------------------------------KQQREIEQTKDLIN------------ 374 (652)
Q Consensus 361 ------------------------------------------------------~~~~~~~~~~~~~~------------ 374 (652)
++...++++...++
T Consensus 961 li~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a 1040 (1381)
T KOG0054|consen 961 LIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISA 1040 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 00000000000000
Q ss_pred ---------Hhc---------------cC-ccccchhHH------------------------HHHHHHHHHHhhhcccc
Q 006275 375 ---------RLG---------------AG-ANSGRASSA------------------------EKKLERLQEEEQIEKPF 405 (652)
Q Consensus 375 ---------~l~---------------~~-~~~~~~~~~------------------------~~~l~~l~~~~~~~~~~ 405 (652)
-+. .. .++|.++-+ ...+||+.++...++..
T Consensus 1041 ~RWla~Rle~ig~~~v~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~ 1120 (1381)
T KOG0054|consen 1041 NRWLAVRLELLGNLVVLIAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEA 1120 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCC
Confidence 000 00 112221100 11126666665432220
Q ss_pred cccceEEecCCCCCCCCcEEEEEeeeeEeCCe--eeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEE
Q 006275 406 QRKQMKIRFPERGRSGRSVVTIKNLEFGYEDR--LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLL 483 (652)
Q Consensus 406 ~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~~--~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~ 483 (652)
......-. |++.||.++.|+++|++.+|.+. +||+||||+|++||++||||++|||||||+.+|.++.+|.+|+|.|
T Consensus 1121 p~~~~~~~-pp~~WP~~G~I~f~~~~~RYrp~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~I 1199 (1381)
T KOG0054|consen 1121 PLEIEESR-PPPSWPSKGEIEFEDLSLRYRPNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILI 1199 (1381)
T ss_pred CCCCcCCC-CCCCCCCCCeEEEEEeEEEeCCCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEE
Confidence 01111112 77889999999999999999754 7999999999999999999999999999999999999999999999
Q ss_pred Cceeccc----------ceecccccccCCCCCCHHHHHHHhhhhccHHHHHHHHhhCCCChhh------hccC----cCC
Q 006275 484 GEHNVLP----------NYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADM------LDRK----VSL 543 (652)
Q Consensus 484 ~g~~~~~----------~~~~~~~~~~~~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~------~~~~----~~~ 543 (652)
||.++.. ..++|+ +..++-|++.|+.-. ..+.+++++++|+++++.... +|.. ..+
T Consensus 1200 DgvdI~~igL~dLRsrlsIIPQd---PvLFsGTvR~NLDPf-~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N 1275 (1381)
T KOG0054|consen 1200 DGVDISKIGLHDLRSRLSIIPQD---PVLFSGTVRFNLDPF-DEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGEN 1275 (1381)
T ss_pred cCeecccccHHHHHhcCeeeCCC---CceecCccccccCcc-cccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCcc
Confidence 9998731 234543 344678898887543 346778899999999885322 2222 258
Q ss_pred CCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHh-cC-ceEEEEecCHHHHHhhccEEEEEeCCEEEee
Q 006275 544 LSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISE-YK-GTVITVSHDRYFVKQIVNRVVEVKGSNLQDY 621 (652)
Q Consensus 544 LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~-~~-~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~ 621 (652)
+|-||||.+||||||+++++||+|||+|+++|+++...+++.|++ |+ .|||.|+|++++|.+ ||||+||++|++++|
T Consensus 1276 ~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd-~DrVlVld~G~v~Ef 1354 (1381)
T KOG0054|consen 1276 FSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMD-SDRVLVLDAGRVVEF 1354 (1381)
T ss_pred CChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhh-cCeEEEeeCCeEeec
Confidence 999999999999999999999999999999999999999999995 44 599999999999999 999999999999976
Q ss_pred cCChhhHhhhcCCc
Q 006275 622 AGDYNVCFTSFSPF 635 (652)
Q Consensus 622 ~g~~~~~~~~~~~~ 635 (652)
|+|.+.++.....
T Consensus 1355 -dsP~~Ll~~~~S~ 1367 (1381)
T KOG0054|consen 1355 -DSPAELLSDKDSL 1367 (1381)
T ss_pred -CChHHHHhCCcch
Confidence 7777777654433
No 23
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.7e-74 Score=593.01 Aligned_cols=452 Identities=21% Similarity=0.342 Sum_probs=366.6
Q ss_pred CCceEEEeEEEEeC----CeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCC-----CCcEEEECCCC-----
Q 006275 95 SSGVKLENISKSYK----GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN----- 160 (652)
Q Consensus 95 ~~~i~v~~ls~~y~----~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~i~~~~~~----- 160 (652)
++.++++|+++.|. ...++++|||+|.+||.+||||.+|||||-..+.|+|+++. -+|+|.++|.+
T Consensus 4 ~~lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~s 83 (534)
T COG4172 4 MPLLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAAS 83 (534)
T ss_pred CcceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCC
Confidence 46799999999995 45699999999999999999999999999999999999975 36899998853
Q ss_pred ---------ceEEEEeccCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHh
Q 006275 161 ---------MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQA 229 (652)
Q Consensus 161 ---------~~i~~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (652)
.+|++++|+|. +.+-.|+...+.... +....
T Consensus 84 e~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l--------------------------------------~~Hrg 125 (534)
T COG4172 84 ERQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVL--------------------------------------RLHRG 125 (534)
T ss_pred HHHHhhhcccceEEEecccccccCcHhHHHHHHHHHH--------------------------------------HHHhc
Confidence 27999999984 323335554443211 11122
Q ss_pred CChhcHHHHHHHHhhhcCCCcc--cccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----
Q 006275 230 VNLDTLDAKVSKLMPELGFTAD--DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---- 303 (652)
Q Consensus 230 ~~~~~~~~~i~~ll~~lgl~~~--~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---- 303 (652)
+.....+.++.++|+.+|++.+ ..+.++++|||||||||+||.||+.+|++||.||||.+||.....++.++|+
T Consensus 126 ~~~~~Ar~r~lelL~~VgI~~p~~rl~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~ 205 (534)
T COG4172 126 LSRAAARARALELLELVGIPEPEKRLDAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQA 205 (534)
T ss_pred ccHHHHHHHHHHHHHHcCCCchhhhhhhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHH
Confidence 3444567788899999999743 5678899999999999999999999999999999999999999999988875
Q ss_pred cCCCeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccc
Q 006275 304 KQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSG 383 (652)
Q Consensus 304 ~~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 383 (652)
+.|.++++||||+..+.++||||.+|..|.+ +..|...++..... ..| ++.+++.
T Consensus 206 ~~gMa~lfITHDL~iVr~~ADrV~VM~~G~i-vE~~~t~~lF~~Pq-------HpY---------Tr~Ll~a-------- 260 (534)
T COG4172 206 ELGMAILFITHDLGIVRKFADRVYVMQHGEI-VETGTTETLFAAPQ-------HPY---------TRKLLAA-------- 260 (534)
T ss_pred HhCcEEEEEeccHHHHHHhhhhEEEEeccEE-eecCcHHHHhhCCC-------ChH---------HHHHHhc--------
Confidence 4699999999999999999999999999998 46665444332211 011 1112210
Q ss_pred chhHHHHHHHHHHHHhhhcccccccceEEecCCCCCCCCcEEEEEeeeeEeCC-----------eeeeeceEEEEEcCeE
Q 006275 384 RASSAEKKLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYED-----------RLLFNRANLTIERGEK 452 (652)
Q Consensus 384 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~-----------~~vl~~isl~i~~Ge~ 452 (652)
.|...+ ++.+..+.++++.++|.+.|+- ..+++++||++++|+.
T Consensus 261 -------------------eP~g~~------~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqT 315 (534)
T COG4172 261 -------------------EPSGDP------PPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQT 315 (534)
T ss_pred -------------------CCCCCC------CCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCe
Confidence 111000 2223345678999999999952 2479999999999999
Q ss_pred EEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceeccc-------------ceecccccccCCCCCCHHHHHHHhhh---
Q 006275 453 TAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP-------------NYFEQNQAEALDLDKTVLETVAEAAE--- 516 (652)
Q Consensus 453 ~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~-------------~~~~~~~~~~~~~~~tv~e~~~~~~~--- 516 (652)
+||||.+|||||||-++|.+++++. |+|.++|.++.. ..++|++-..+.|.+||.+.+..+..
T Consensus 316 lGlVGESGSGKsTlG~allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~ 394 (534)
T COG4172 316 LGLVGESGSGKSTLGLALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHE 394 (534)
T ss_pred EEEEecCCCCcchHHHHHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcC
Confidence 9999999999999999999999887 999999988631 24566666678899999999987642
Q ss_pred -----hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--
Q 006275 517 -----DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY-- 589 (652)
Q Consensus 517 -----~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~-- 589 (652)
....+.+.++|..+|++....+++|+++|||||||++|||||+.+|++++||||||+||..-+..+.++++++
T Consensus 395 ~~ls~~eR~~rv~~aL~EVGLDp~~r~RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~ 474 (534)
T COG4172 395 PKLSAAERDQRVIEALEEVGLDPATRNRYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQ 474 (534)
T ss_pred CCCCHHHHHHHHHHHHHHcCCChhHhhcCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHH
Confidence 1234568899999999999999999999999999999999999999999999999999999999999988754
Q ss_pred --CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhhcCCcc
Q 006275 590 --KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTSFSPFL 636 (652)
Q Consensus 590 --~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~~~~~~ 636 (652)
+.+.++||||+..+..+||+|+||++|+|++ .|+.+.+++.....|
T Consensus 475 k~~LsYLFISHDL~VvrAl~~~viVm~~GkiVE-~G~~~~if~~P~~~Y 522 (534)
T COG4172 475 KHGLSYLFISHDLAVVRALCHRVIVMRDGKIVE-QGPTEAVFANPQHEY 522 (534)
T ss_pred HhCCeEEEEeccHHHHHHhhceEEEEeCCEEee-eCCHHHHhcCCCcHH
Confidence 4599999999999999999999999999996 588888776554433
No 24
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=2.7e-73 Score=644.99 Aligned_cols=419 Identities=26% Similarity=0.380 Sum_probs=320.3
Q ss_pred eEEEEeCCe-eeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEE-----------ECCCC---------
Q 006275 102 NISKSYKGV-TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVI-----------KAKSN--------- 160 (652)
Q Consensus 102 ~ls~~y~~~-~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~-----------~~~~~--------- 160 (652)
+++++|+++ .+|++++ .+++|+++||+||||||||||+++|+|+++|++|+|. ++|.+
T Consensus 78 ~~~~~yg~~~~~L~~l~-~i~~Gev~gLvG~NGaGKSTLlkiL~G~l~p~~G~i~~~~~~~~~~~~~~G~~l~~~~~~~~ 156 (590)
T PRK13409 78 EPVHRYGVNGFKLYGLP-IPKEGKVTGILGPNGIGKTTAVKILSGELIPNLGDYEEEPSWDEVLKRFRGTELQNYFKKLY 156 (590)
T ss_pred CceEEecCCceeEecCC-cCCCCCEEEEECCCCCCHHHHHHHHhCCccCCCccccCCCcHHHHHHHhCChHHHHHHHHHh
Confidence 489999875 5999999 9999999999999999999999999999999999997 55432
Q ss_pred ---ceEEEEeccCccCC---CCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhc
Q 006275 161 ---MKIAFLSQEFEVSM---SRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDT 234 (652)
Q Consensus 161 ---~~i~~v~Q~~~~~~---~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (652)
.++++.+|.....+ ..||.|++... .
T Consensus 157 ~~~~~~~~~~q~~~~~p~~~~~tv~e~l~~~------------------------------------------------~ 188 (590)
T PRK13409 157 NGEIKVVHKPQYVDLIPKVFKGKVRELLKKV------------------------------------------------D 188 (590)
T ss_pred ccCcceeecccchhhhhhhhcchHHHHHHhh------------------------------------------------h
Confidence 23565565432222 23666665210 0
Q ss_pred HHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHccC--CCeEEEE
Q 006275 235 LDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQ--DVPMVII 312 (652)
Q Consensus 235 ~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~--g~tvIiv 312 (652)
...++.++++.+|+. ...++++.+|||||||||+||+||+.+|++|||||||++||+.++.++.++|++. |+|||+|
T Consensus 189 ~~~~~~~~l~~l~l~-~~~~~~~~~LSgGe~qrv~ia~al~~~p~lllLDEPts~LD~~~~~~l~~~i~~l~~g~tvIiv 267 (590)
T PRK13409 189 ERGKLDEVVERLGLE-NILDRDISELSGGELQRVAIAAALLRDADFYFFDEPTSYLDIRQRLNVARLIRELAEGKYVLVV 267 (590)
T ss_pred HHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEE
Confidence 123455678888886 5679999999999999999999999999999999999999999999998887543 8999999
Q ss_pred ecCHHHHHhhcCeEEEEcCCeEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHH
Q 006275 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKL 392 (652)
Q Consensus 313 sHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l 392 (652)
|||++++..+||+|+++.++. |.|..+....... ..+ ...+..+.. .
T Consensus 268 sHd~~~l~~~~D~v~vl~~~~-----g~~g~~~~~~~~~------------~~i---~~~~~~~~~---------~---- 314 (590)
T PRK13409 268 EHDLAVLDYLADNVHIAYGEP-----GAYGVVSKPKGVR------------VGI---NEYLKGYLP---------E---- 314 (590)
T ss_pred eCCHHHHHHhCCEEEEEeCCc-----cccceecchhHHH------------HhH---HHHHHhcch---------h----
Confidence 999999999999999997642 1111111000000 000 000000000 0
Q ss_pred HHHHHHhhhcccccccceEEecC--CCCCCCCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHH
Q 006275 393 ERLQEEEQIEKPFQRKQMKIRFP--ERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLI 470 (652)
Q Consensus 393 ~~l~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l 470 (652)
+.++ .. + ....+..+ .....+.++++++|+++.|++. .|+++||+|++||+++|+||||||||||+++|
T Consensus 315 e~~~----~~-~---~~~~~~~~~~~~~~~~~~~l~~~~ls~~~~~~-~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L 385 (590)
T PRK13409 315 ENMR----IR-P---EPIEFEERPPRDESERETLVEYPDLTKKLGDF-SLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLL 385 (590)
T ss_pred hhhh----cc-c---cCcceecCCCccccCCceEEEEcceEEEECCE-EEEecceEECCCCEEEEECCCCCCHHHHHHHH
Confidence 0000 00 0 00001111 1111345689999999999765 49999999999999999999999999999999
Q ss_pred hCCCCCCeeEEEECceecccceecccccccCCCCCCHHHHHHHhhhhcc-HHHHHHHHhhCCCChhhhccCcCCCCHHHH
Q 006275 471 MGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWR-IDDIKGLLGRCNFKADMLDRKVSLLSGGEK 549 (652)
Q Consensus 471 ~g~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~~~tv~e~~~~~~~~~~-~~~~~~~L~~~~l~~~~~~~~~~~LSgGqr 549 (652)
+|+++|++|+|.++ +..+|++|.. ...+..||.+++........ ...+.++++.+++. +..++++.+||||||
T Consensus 386 ~Gl~~p~~G~I~~~---~~i~y~~Q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~-~~~~~~~~~LSGGe~ 459 (590)
T PRK13409 386 AGVLKPDEGEVDPE---LKISYKPQYI--KPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLE-RLLDKNVKDLSGGEL 459 (590)
T ss_pred hCCCCCCceEEEEe---eeEEEecccc--cCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCH-HHHhCCcccCCHHHH
Confidence 99999999999886 3456777754 34578899999986432221 23467889999995 678999999999999
Q ss_pred HHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEE
Q 006275 550 ARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQ 619 (652)
Q Consensus 550 qrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~ 619 (652)
|||+|||||+.+|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+|||+++|++ ++.
T Consensus 460 QRvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~ 532 (590)
T PRK13409 460 QRVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPG 532 (590)
T ss_pred HHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cce
Confidence 9999999999999999999999999999999999999875 56999999999999999999999975 554
No 25
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.3e-73 Score=602.86 Aligned_cols=487 Identities=31% Similarity=0.503 Sum_probs=384.7
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccCccCC
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSM 174 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~~~~~ 174 (652)
...|.+.+.+..||++.+|++-++++..|-++||||+||+|||||||+|+. |.|.... ++|+..-
T Consensus 78 ~~Di~~~~fdLa~G~k~LL~~a~L~L~~GrRYGLvGrNG~GKsTLLRaia~------~~v~~f~-------veqE~~g-- 142 (582)
T KOG0062|consen 78 SKDIHIDNFDLAYGGKILLNKANLTLSRGRRYGLVGRNGIGKSTLLRAIAN------GQVSGFH-------VEQEVRG-- 142 (582)
T ss_pred ccceeeeeeeeeecchhhhcCCceeeecccccceeCCCCCcHHHHHHHHHh------cCcCccC-------chhheec--
Confidence 446899999999999999999999999999999999999999999999996 4443221 1222100
Q ss_pred CCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChh-cHHHHHHHHhhhcCCCcccc
Q 006275 175 SRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLD-TLDAKVSKLMPELGFTADDG 253 (652)
Q Consensus 175 ~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ll~~lgl~~~~~ 253 (652)
..| +.+.......... .+++. .. ..+... .+++...++|..+||+++..
T Consensus 143 ~~t--~~~~~~l~~D~~~-----------------~dfl~----------~e-~~l~~~~~l~ei~~~~L~glGFt~emq 192 (582)
T KOG0062|consen 143 DDT--EALQSVLESDTER-----------------LDFLA----------EE-KELLAGLTLEEIYDKILAGLGFTPEMQ 192 (582)
T ss_pred cch--HHHhhhhhccHHH-----------------HHHHH----------hh-hhhhccchHHHHHHHHHHhCCCCHHHH
Confidence 000 0000000000000 00000 00 001111 22333444889999999999
Q ss_pred cCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcCCe
Q 006275 254 DRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGV 333 (652)
Q Consensus 254 ~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~ii~l~~G~ 333 (652)
.+++.+||||||+|++|||||..+|||||||||||+||..+..||.++|+..+.|+|+||||..|++.+|+.||.+++-+
T Consensus 193 ~~pt~slSGGWrMrlaLARAlf~~pDlLLLDEPTNhLDv~av~WLe~yL~t~~~T~liVSHDr~FLn~V~tdIIH~~~~k 272 (582)
T KOG0062|consen 193 LQPTKSLSGGWRMRLALARALFAKPDLLLLDEPTNHLDVVAVAWLENYLQTWKITSLIVSHDRNFLNTVCTDIIHLENLK 272 (582)
T ss_pred hccccccCcchhhHHHHHHHHhcCCCEEeecCCcccchhHHHHHHHHHHhhCCceEEEEeccHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-ccccchhHHHHHHHHHHHHhhhcccccccceEE
Q 006275 334 SRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAG-ANSGRASSAEKKLERLQEEEQIEKPFQRKQMKI 412 (652)
Q Consensus 334 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 412 (652)
+..|.|||++|...+++....+...|+.+.+..+..+..+++++=. +.+..++++.+.++++ +...++.......+
T Consensus 273 L~~YkGN~~~Fvk~k~E~~~n~qrefe~q~~~R~h~q~fid~FrYna~ra~svqSRIk~L~kl---~~lk~~~~~~~~~~ 349 (582)
T KOG0062|consen 273 LDYYKGNYSQFVKTKPEAKKNQQREFEVQMKYRAHLQVFIDKFRYNAARASSVQSRIKMLGKL---PALKSTLIEVLIGF 349 (582)
T ss_pred hhhhcCcHHHHHHhhHHhhhhhhhhcchHHHHHHHHHHHHHHhccCcccchhHHHHHHHhccC---CCCCccceecccce
Confidence 9999999999999998888888888887776666667777765421 1122333333333332 22233444444556
Q ss_pred ecCCCC-CCCCcEEEEEeeeeEeCCe--eeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc
Q 006275 413 RFPERG-RSGRSVVTIKNLEFGYEDR--LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL 489 (652)
Q Consensus 413 ~~p~~~-~~~~~~i~~~~v~~~y~~~--~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~ 489 (652)
.+|+++ ..+.+.+++.+|+|.|... +++.++++.++.-++++++|+||+||||+++++.|...|..|.+.+.+. +.
T Consensus 350 ~fP~~~e~~~~p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~r-~r 428 (582)
T KOG0062|consen 350 LFPTEGEVLSPPNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHPR-LR 428 (582)
T ss_pred ecCCCCCcCCCCeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeeccc-ce
Confidence 677743 4567889999999999754 4899999999999999999999999999999999999999999988764 56
Q ss_pred cceecccccccCCCCCCHHHHHHHhhhhccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeC
Q 006275 490 PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (652)
Q Consensus 490 ~~~~~~~~~~~~~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDE 569 (652)
.+|+.|..-..+....+..+.++........++++.-|+.+|++.++...++..||||||-||+||.+.+.+|.+|+|||
T Consensus 429 i~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~si~~LSGGQKsrvafA~~~~~~PhlLVLDE 508 (582)
T KOG0062|consen 429 IKYFAQHHVDFLDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQSIASLSGGQKSRVAFAACTWNNPHLLVLDE 508 (582)
T ss_pred ecchhHhhhhHHHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhccccccCCcchhHHHHHHHhcCCCcEEEecC
Confidence 67888865444444445555555544445678899999999999999988999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 570 PTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 570 Pt~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
|||+||.++...|-++|+.|++.||+||||.+|+..+|+.+|+.++|++..+.|...+|.+
T Consensus 509 PTNhLD~dsl~AL~~Al~~F~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~ieg~~~~yKk 569 (582)
T KOG0062|consen 509 PTNHLDRDSLGALAKALKNFNGGVVLVSHDEEFISSLCKELWVVEDGKVTPIEGGIDKYKK 569 (582)
T ss_pred CCccccHHHHHHHHHHHHhcCCcEEEEECcHHHHhhcCceeEEEcCCcEEeeeccHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988898877644
No 26
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.1e-71 Score=690.08 Aligned_cols=486 Identities=19% Similarity=0.341 Sum_probs=344.2
Q ss_pred CceEEEeEEEEeCC---eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCC-cEEEECCCCceEEEEeccCc
Q 006275 96 SGVKLENISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDS-GNVIKAKSNMKIAFLSQEFE 171 (652)
Q Consensus 96 ~~i~v~~ls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~-G~i~~~~~~~~i~~v~Q~~~ 171 (652)
..|+++|++|+|++ +++|+|+||+|++|++++|+||+|||||||+++|+|+++|++ |+|.+. .+|+||+|+||
T Consensus 613 ~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~---~~Iayv~Q~p~ 689 (1622)
T PLN03130 613 PAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIR---GTVAYVPQVSW 689 (1622)
T ss_pred CceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEc---CeEEEEcCccc
Confidence 35999999999964 569999999999999999999999999999999999999999 999874 47999999999
Q ss_pred cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcc
Q 006275 172 VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTAD 251 (652)
Q Consensus 172 ~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~ 251 (652)
+ ++.||+|||..+- +.+ -+++.+.++ .|.+..++..+ . -|+.+.
T Consensus 690 L-fngTIreNI~fg~--~~d----~e~y~~vl~---------------------------a~~L~~di~~L-P-~Gd~T~ 733 (1622)
T PLN03130 690 I-FNATVRDNILFGS--PFD----PERYERAID---------------------------VTALQHDLDLL-P-GGDLTE 733 (1622)
T ss_pred c-CCCCHHHHHhCCC--ccc----HHHHHHHHH---------------------------HhCcHHHHHhC-C-Cccccc
Confidence 8 6789999997431 111 122333333 23333333322 1 144444
Q ss_pred cccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHH-HHHcc--CCCeEEEEecCHHHHHhhcCeEEE
Q 006275 252 DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLE-GYLGK--QDVPMVIISHDRAFLDQLCTKIVE 328 (652)
Q Consensus 252 ~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~-~~L~~--~g~tvIivsHd~~~l~~~~d~ii~ 328 (652)
.+++ ..+|||||||||+|||||+++|+|||||||||+||+++.+.+. +.++. .++|+|+|||+++.+ ..||+|++
T Consensus 734 IGe~-G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l-~~aD~Ii~ 811 (1622)
T PLN03130 734 IGER-GVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFL-SQVDRIIL 811 (1622)
T ss_pred ccCC-CCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHH-HhCCEEEE
Confidence 4444 6889999999999999999999999999999999999988775 34443 489999999999988 56999999
Q ss_pred EcCCeEEEecCChHHHHHHHH---------------------------------------------------------HH
Q 006275 329 TEMGVSRTYEGNYSQYVLEKA---------------------------------------------------------AW 351 (652)
Q Consensus 329 l~~G~~~~~~g~~~~~~~~~~---------------------------------------------------------~~ 351 (652)
|++|++. ..|+|+++..... ..
T Consensus 812 L~~G~i~-e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (1622)
T PLN03130 812 VHEGMIK-EEGTYEELSNNGPLFQKLMENAGKMEEYVEENGEEEDDQTSSKPVANGNANNLKKDSSSKKKSKEGKSVLIK 890 (1622)
T ss_pred EeCCEEE-EeCCHHHHHhcchhHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccchhhhh
Confidence 9999874 5666555421000 00
Q ss_pred HHHH---------HHHHH--------------------------------HHHHH-------------------------
Q 006275 352 IESQ---------YAAWE--------------------------------KQQRE------------------------- 365 (652)
Q Consensus 352 ~~~~---------~~~~~--------------------------------~~~~~------------------------- 365 (652)
.+.. +..|. |....
T Consensus 891 ~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~i~~~l~~~~~i~~ 970 (1622)
T PLN03130 891 QEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPKTHGPLFYNLIYALLSFGQVLVT 970 (1622)
T ss_pred HHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHHHHHHHHHHHHHHHHH
Confidence 0000 00000 00000
Q ss_pred --------------HHHHH---------------------HHHHHhccC-------------------------------
Q 006275 366 --------------IEQTK---------------------DLINRLGAG------------------------------- 379 (652)
Q Consensus 366 --------------~~~~~---------------------~~~~~l~~~------------------------------- 379 (652)
..+++ +.++|+..+
T Consensus 971 ~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~ 1050 (1622)
T PLN03130 971 LLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGI 1050 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 000000000
Q ss_pred --------------------------------------------------------------------------------
Q 006275 380 -------------------------------------------------------------------------------- 379 (652)
Q Consensus 380 -------------------------------------------------------------------------------- 379 (652)
T Consensus 1051 ~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~ 1130 (1622)
T PLN03130 1051 VSTISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTL 1130 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence
Q ss_pred --------------------------------cc-------ccchh------------------------HHHHHHHHHH
Q 006275 380 --------------------------------AN-------SGRAS------------------------SAEKKLERLQ 396 (652)
Q Consensus 380 --------------------------------~~-------~~~~~------------------------~~~~~l~~l~ 396 (652)
.. ++..+ .....++|+.
T Consensus 1131 ~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~ 1210 (1622)
T PLN03130 1131 VNMSSNRWLAIRLETLGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVG 1210 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00000 0000001111
Q ss_pred HHhhhcccccccceEEecCCCCCCCCcEEEEEeeeeEeCC--eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCC
Q 006275 397 EEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLE 474 (652)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~--~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~ 474 (652)
+.... +++.........|++.|+.++.|+++||+++|.+ .++|+|+||+|++||++|||||||||||||+++|+|++
T Consensus 1211 e~~~~-~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~ 1289 (1622)
T PLN03130 1211 TYIDL-PSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIV 1289 (1622)
T ss_pred HHhCC-CCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcC
Confidence 11000 0000000000012234555667999999999964 37999999999999999999999999999999999999
Q ss_pred CCCeeEEEECceecc----------cceecccccccCCCCCCHHHHHHHhhhhccHHHHHHHHhhCCCChhhh-------
Q 006275 475 KPRGGEVLLGEHNVL----------PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADML------- 537 (652)
Q Consensus 475 ~p~~G~i~~~g~~~~----------~~~~~~~~~~~~~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~------- 537 (652)
+|++|+|.+||.++. .++++|+ + ..++.|+++|+.... ...+++++++++++++. +..
T Consensus 1290 ~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQd--p-~LF~GTIreNLd~~~-~~tdeei~~Al~~a~l~-~~I~~lp~GL 1364 (1622)
T PLN03130 1290 ELERGRILIDGCDISKFGLMDLRKVLGIIPQA--P-VLFSGTVRFNLDPFN-EHNDADLWESLERAHLK-DVIRRNSLGL 1364 (1622)
T ss_pred CCCCceEEECCEecccCCHHHHHhccEEECCC--C-ccccccHHHHhCcCC-CCCHHHHHHHHHHcCcH-HHHHhCcccc
Confidence 999999999999863 2355554 3 345679999997654 45667788888887773 222
Q ss_pred c----cCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEE
Q 006275 538 D----RKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVV 611 (652)
Q Consensus 538 ~----~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi 611 (652)
| ....+||||||||+||||||+++|+|||||||||+||.++.+.+++.|++. +.|||+|+|+++++.+ ||||+
T Consensus 1365 dt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~-~DrIl 1443 (1622)
T PLN03130 1365 DAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRIL 1443 (1622)
T ss_pred CccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHh-CCEEE
Confidence 2 233589999999999999999999999999999999999999999999865 4699999999999987 99999
Q ss_pred EEeCCEEEeecCChhhHhhh
Q 006275 612 EVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 612 ~l~~g~i~~~~g~~~~~~~~ 631 (652)
+|++|+|+++ |++++.++.
T Consensus 1444 VLd~G~IvE~-Gt~~eLl~~ 1462 (1622)
T PLN03130 1444 VLDAGRVVEF-DTPENLLSN 1462 (1622)
T ss_pred EEECCEEEEe-CCHHHHHhC
Confidence 9999999864 888887654
No 27
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.7e-71 Score=686.20 Aligned_cols=488 Identities=19% Similarity=0.341 Sum_probs=342.5
Q ss_pred CceEEEeEEEEeCC---eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccCcc
Q 006275 96 SGVKLENISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEV 172 (652)
Q Consensus 96 ~~i~v~~ls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~~~ 172 (652)
..|+++|++|+|++ +++|+|+||+|++|++++|+||+|||||||+++|+|+++|++|.+.. .+..|+||+|+||+
T Consensus 613 ~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~~--~~~~Iayv~Q~p~L 690 (1495)
T PLN03232 613 PAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSVV--IRGSVAYVPQVSWI 690 (1495)
T ss_pred CcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEEE--ecCcEEEEcCcccc
Confidence 35999999999974 46999999999999999999999999999999999999999986643 24579999999998
Q ss_pred CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCccc
Q 006275 173 SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADD 252 (652)
Q Consensus 173 ~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~ 252 (652)
++.||+|||..+- ..+ .+++.+.++. +.+..++.. ++ -|+.+..
T Consensus 691 -f~gTIreNI~fg~--~~~----~e~~~~vl~~---------------------------~~L~~di~~-Lp-~Gd~T~I 734 (1495)
T PLN03232 691 -FNATVRENILFGS--DFE----SERYWRAIDV---------------------------TALQHDLDL-LP-GRDLTEI 734 (1495)
T ss_pred -ccccHHHHhhcCC--ccC----HHHHHHHHHH---------------------------hCCHHHHHh-CC-CCCCcee
Confidence 6789999997431 111 0222222322 223333322 21 1444444
Q ss_pred ccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHH-HHcc--CCCeEEEEecCHHHHHhhcCeEEEE
Q 006275 253 GDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEG-YLGK--QDVPMVIISHDRAFLDQLCTKIVET 329 (652)
Q Consensus 253 ~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~-~L~~--~g~tvIivsHd~~~l~~~~d~ii~l 329 (652)
+++ ..+|||||||||+||||++++|+|||||||||+||+++.+.+.+ .++. .++|+|+|||+++.+ ..||+|++|
T Consensus 735 Ge~-G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l-~~aD~Ii~L 812 (1495)
T PLN03232 735 GER-GVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFL-PLMDRIILV 812 (1495)
T ss_pred cCC-CcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhH-HhCCEEEEE
Confidence 444 68999999999999999999999999999999999999887754 3443 579999999999988 569999999
Q ss_pred cCCeEEEecCChHHHHHHHH----------------------------------------------------H--HHHHH
Q 006275 330 EMGVSRTYEGNYSQYVLEKA----------------------------------------------------A--WIESQ 355 (652)
Q Consensus 330 ~~G~~~~~~g~~~~~~~~~~----------------------------------------------------~--~~~~~ 355 (652)
++|++. ..|+++++..... . ..+..
T Consensus 813 ~~G~i~-~~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 891 (1495)
T PLN03232 813 SEGMIK-EEGTFAELSKSGSLFKKLMENAGKMDATQEVNTNDENILKLGPTVTIDVSERNLGSTKQGKRGRSVLVKQEER 891 (1495)
T ss_pred eCCEEE-EecCHHHHHhcchhHHHHHHhcccccccccccccccccccccccccccccccccccccccccchhhhhhHHHH
Confidence 999873 5566554321000 0 00000
Q ss_pred ---------H-----------------------------H-HHH--HHHHH----------H------------------
Q 006275 356 ---------Y-----------------------------A-AWE--KQQRE----------I------------------ 366 (652)
Q Consensus 356 ---------~-----------------------------~-~~~--~~~~~----------~------------------ 366 (652)
+ . -|- |.... +
T Consensus 892 ~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~ 971 (1495)
T PLN03232 892 ETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTPKSYSPGFYIVVYALLGFGQVAVTFTNS 971 (1495)
T ss_pred hcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 000 00000 0
Q ss_pred -----------HHHHH-HHH--------------------HhccC-----------------------------------
Q 006275 367 -----------EQTKD-LIN--------------------RLGAG----------------------------------- 379 (652)
Q Consensus 367 -----------~~~~~-~~~--------------------~l~~~----------------------------------- 379 (652)
.+++. ..+ |+..+
T Consensus 972 ~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~~~~~~~ 1051 (1495)
T PLN03232 972 FWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFALIGTVSTI 1051 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 000 00000
Q ss_pred --------------------------------------------------------------------------------
Q 006275 380 -------------------------------------------------------------------------------- 379 (652)
Q Consensus 380 -------------------------------------------------------------------------------- 379 (652)
T Consensus 1052 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1131 (1495)
T PLN03232 1052 SLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLANTS 1131 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence
Q ss_pred ----------------------------cc-------ccchh------------------------HHHHHHHHHHHHhh
Q 006275 380 ----------------------------AN-------SGRAS------------------------SAEKKLERLQEEEQ 400 (652)
Q Consensus 380 ----------------------------~~-------~~~~~------------------------~~~~~l~~l~~~~~ 400 (652)
.. .+..+ .....++|+.+...
T Consensus 1132 ~~~wl~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~eRi~e~~~ 1211 (1495)
T PLN03232 1132 SNRWLTIRLETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENSLNSVERVGNYID 1211 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00 00000 00000011111100
Q ss_pred hcccccccceEEecCCCCCCCCcEEEEEeeeeEeCC--eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCe
Q 006275 401 IEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRG 478 (652)
Q Consensus 401 ~~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~--~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~ 478 (652)
. +++.........|+..|+..+.|+++||+++|++ +++|+|+||+|++||++|||||||||||||+++|+|+++|++
T Consensus 1212 ~-~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~ 1290 (1495)
T PLN03232 1212 L-PSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEK 1290 (1495)
T ss_pred C-CccccccccCCCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCC
Confidence 0 0000000000012223555567999999999953 479999999999999999999999999999999999999999
Q ss_pred eEEEECceecc----------cceecccccccCCCCCCHHHHHHHhhhhccHHHHHHHHhhCCCChhhh-----------
Q 006275 479 GEVLLGEHNVL----------PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADML----------- 537 (652)
Q Consensus 479 G~i~~~g~~~~----------~~~~~~~~~~~~~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~----------- 537 (652)
|+|.+||.++. .++++|+ +.+ ++.|+++|+.... ...+++++++++..++.. ..
T Consensus 1291 G~I~IdG~di~~i~~~~lR~~i~iVpQd--p~L-F~gTIr~NL~~~~-~~sdeei~~al~~a~l~~-~I~~lp~GLdt~v 1365 (1495)
T PLN03232 1291 GRIMIDDCDVAKFGLTDLRRVLSIIPQS--PVL-FSGTVRFNIDPFS-EHNDADLWEALERAHIKD-VIDRNPFGLDAEV 1365 (1495)
T ss_pred ceEEECCEEhhhCCHHHHHhhcEEECCC--Cee-eCccHHHHcCCCC-CCCHHHHHHHHHHcCCHH-HHHhCcCCCCcee
Confidence 99999998863 2355554 333 5679999997653 456677888888887742 22
Q ss_pred ccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeC
Q 006275 538 DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKG 615 (652)
Q Consensus 538 ~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~ 615 (652)
.....+||||||||+||||||+++|+|||||||||+||.++.+.+++.|++. +.|||+|+|+++++.+ ||||++|++
T Consensus 1366 ~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~-~DrIlVL~~ 1444 (1495)
T PLN03232 1366 SEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIID-CDKILVLSS 1444 (1495)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHh-CCEEEEEEC
Confidence 2234589999999999999999999999999999999999999999999875 4699999999999987 999999999
Q ss_pred CEEEeecCChhhHhhhc
Q 006275 616 SNLQDYAGDYNVCFTSF 632 (652)
Q Consensus 616 g~i~~~~g~~~~~~~~~ 632 (652)
|++++ .|++++.++..
T Consensus 1445 G~ivE-~Gt~~eLl~~~ 1460 (1495)
T PLN03232 1445 GQVLE-YDSPQELLSRD 1460 (1495)
T ss_pred CEEEE-ECCHHHHHhCC
Confidence 99986 48888876543
No 28
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=2.4e-70 Score=678.59 Aligned_cols=208 Identities=22% Similarity=0.371 Sum_probs=176.2
Q ss_pred CCCCCcEEEEEeeeeEeCC--eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc------
Q 006275 418 GRSGRSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------ 489 (652)
Q Consensus 418 ~~~~~~~i~~~~v~~~y~~--~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------ 489 (652)
.|+.++.|+++||+++|++ .++|+|+||+|++||++||||+||||||||+++|.|+++|++|+|.+||.++.
T Consensus 1278 ~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~ 1357 (1522)
T TIGR00957 1278 GWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHD 1357 (1522)
T ss_pred CCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHH
Confidence 4566677999999999974 46999999999999999999999999999999999999999999999999873
Q ss_pred ----cceecccccccCCCCCCHHHHHHHhhhhccHHHHHHHHhhCCCChh------hhccC----cCCCCHHHHHHHHHH
Q 006275 490 ----PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKAD------MLDRK----VSLLSGGEKARLAFC 555 (652)
Q Consensus 490 ----~~~~~~~~~~~~~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~------~~~~~----~~~LSgGqrqrv~LA 555 (652)
.++++|+ + ..++.|+++|+.... ...+++++++++.+++... -.|.. ..+||||||||+|||
T Consensus 1358 LR~~i~iVpQd--p-~LF~gTIr~NLdp~~-~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LA 1433 (1522)
T TIGR00957 1358 LRFKITIIPQD--P-VLFSGSLRMNLDPFS-QYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLA 1433 (1522)
T ss_pred HHhcCeEECCC--C-cccCccHHHHcCccc-CCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHH
Confidence 2355554 3 345679999996332 4567778888888877421 12333 357999999999999
Q ss_pred HHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
|||+++|+|||||||||+||.++...+++.|++. +.|||+|+|+++.+.+ ||||++|++|+|++ .|++++.++.
T Consensus 1434 RALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~-~DrIlVld~G~IvE-~G~~~eLl~~ 1509 (1522)
T TIGR00957 1434 RALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMD-YTRVIVLDKGEVAE-FGAPSNLLQQ 1509 (1522)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHh-CCEEEEEECCEEEE-ECCHHHHHhC
Confidence 9999999999999999999999999999999865 4599999999999987 89999999999986 4888887654
No 29
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9e-71 Score=594.98 Aligned_cols=433 Identities=25% Similarity=0.398 Sum_probs=355.5
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------ceE
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKI 163 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----------~~i 163 (652)
.+.++++|++|+|++.++|++|||+|.+||++||+|.||||||||+|+|+|.++|++|+|.++|.. ..|
T Consensus 6 ~~ll~~~~i~K~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~GI 85 (500)
T COG1129 6 PPLLELRGISKSFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAGI 85 (500)
T ss_pred cceeeeecceEEcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCCc
Confidence 457999999999999999999999999999999999999999999999999999999999999853 259
Q ss_pred EEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHh
Q 006275 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (652)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (652)
+.++|+..+.+++||.|||+..-.. . +....++...+.++..++|
T Consensus 86 ~~V~QEl~L~p~LsVaeNifLgre~--~---------------------------------~~~g~id~~~m~~~A~~~l 130 (500)
T COG1129 86 ATVHQELSLVPNLSVAENIFLGREP--T---------------------------------RRFGLIDRKAMRRRARELL 130 (500)
T ss_pred EEEeechhccCCccHHHHhhccccc--c---------------------------------cCCCccCHHHHHHHHHHHH
Confidence 9999999999999999999632100 0 0011245566788888999
Q ss_pred hhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHH---ccCCCeEEEEecCHHHHH
Q 006275 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL---GKQDVPMVIISHDRAFLD 320 (652)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L---~~~g~tvIivsHd~~~l~ 320 (652)
..+|+.. ..+.++.+||+||||.|+|||||..+++||||||||++|+....+.|++++ ++.|.+||+|||+++++.
T Consensus 131 ~~lg~~~-~~~~~v~~LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~ 209 (500)
T COG1129 131 ARLGLDI-DPDTLVGDLSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVF 209 (500)
T ss_pred HHcCCCC-ChhhhhhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHH
Confidence 9999963 378899999999999999999999999999999999999999999998775 568999999999999999
Q ss_pred hhcCeEEEEcCCeEEEecCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHHHHHHh
Q 006275 321 QLCTKIVETEMGVSRTYEGNY-SQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEE 399 (652)
Q Consensus 321 ~~~d~ii~l~~G~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~ 399 (652)
++||||.+|.+|+.+ ..++. .++- ..+++..+.+ +.
T Consensus 210 ~i~DritVlRDG~~v-~~~~~~~~~~-----------------------~~~lv~~MvG-----r~-------------- 246 (500)
T COG1129 210 EIADRITVLRDGRVV-GTRPTAAETS-----------------------EDELVRLMVG-----RE-------------- 246 (500)
T ss_pred HhcCEEEEEeCCEEe-eecccccCCC-----------------------HHHHHHHhhC-----cc--------------
Confidence 999999999999974 22221 1110 0011111111 00
Q ss_pred hhcccccccceEEecC--CCCCCCCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCC
Q 006275 400 QIEKPFQRKQMKIRFP--ERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR 477 (652)
Q Consensus 400 ~~~~~~~~~~~~~~~p--~~~~~~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~ 477 (652)
... .+| .....+.+.++++|++.. ..++++||++++||++||.|--|||+|-|+++|+|..++.
T Consensus 247 -~~~---------~~~~~~~~~~~~~~l~v~~l~~~----~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~ 312 (500)
T COG1129 247 -LED---------LFPEPPEEGIGEPVLEVRNLSGG----GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPAS 312 (500)
T ss_pred -hhh---------hcccccccCCCCcEEEEecCCCC----CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCC
Confidence 000 011 111345677999999854 2589999999999999999999999999999999999999
Q ss_pred eeEEEECceeccc-----------ceeccc-ccccCCCCCCHHHHHHHhhh-h----------ccHHHHHHHHhhCCCCh
Q 006275 478 GGEVLLGEHNVLP-----------NYFEQN-QAEALDLDKTVLETVAEAAE-D----------WRIDDIKGLLGRCNFKA 534 (652)
Q Consensus 478 ~G~i~~~g~~~~~-----------~~~~~~-~~~~~~~~~tv~e~~~~~~~-~----------~~~~~~~~~L~~~~l~~ 534 (652)
+|+|.++|+++.. .|++.+ ....+...+++.+|+..... . .....+.++..++++..
T Consensus 313 ~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~ 392 (500)
T COG1129 313 SGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKT 392 (500)
T ss_pred CceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCccc
Confidence 9999999987632 344432 34567889999999866511 0 01234677889999988
Q ss_pred hhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEE
Q 006275 535 DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVV 611 (652)
Q Consensus 535 ~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi 611 (652)
...+.++.+||||.||||.|||+|..+|+||||||||.|+|..++..++++|+++ +.+||+||-++.++..+||||+
T Consensus 393 ~s~~~~v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIl 472 (500)
T COG1129 393 PSPEQPIGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRIL 472 (500)
T ss_pred CCccchhhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEE
Confidence 8888999999999999999999999999999999999999999999999999976 4699999999999999999999
Q ss_pred EEeCCEEEe
Q 006275 612 EVKGSNLQD 620 (652)
Q Consensus 612 ~l~~g~i~~ 620 (652)
+|++|++..
T Consensus 473 Vm~~Gri~~ 481 (500)
T COG1129 473 VMREGRIVG 481 (500)
T ss_pred EEECCEEEE
Confidence 999999974
No 30
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=4.4e-67 Score=643.47 Aligned_cols=204 Identities=24% Similarity=0.408 Sum_probs=173.3
Q ss_pred cEEEEEeeeeEeCC---eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCC-----------------------
Q 006275 423 SVVTIKNLEFGYED---RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP----------------------- 476 (652)
Q Consensus 423 ~~i~~~~v~~~y~~---~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p----------------------- 476 (652)
+.|+++||+|+|++ .++|+|+||+|++|+++|||||||||||||+++|+|+++|
T Consensus 1164 g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~ 1243 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQ 1243 (1466)
T ss_pred ceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccccccccccccc
Confidence 35999999999963 4799999999999999999999999999999999999998
Q ss_pred -------------------------------CeeEEEECceecc----------cceecccccccCCCCCCHHHHHHHhh
Q 006275 477 -------------------------------RGGEVLLGEHNVL----------PNYFEQNQAEALDLDKTVLETVAEAA 515 (652)
Q Consensus 477 -------------------------------~~G~i~~~g~~~~----------~~~~~~~~~~~~~~~~tv~e~~~~~~ 515 (652)
++|+|.+||.++. .+|++|++ ..++.|++||+.++.
T Consensus 1244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep---~LF~gTIreNI~~g~ 1320 (1466)
T PTZ00265 1244 GDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEP---MLFNMSIYENIKFGK 1320 (1466)
T ss_pred cccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCC---ccccccHHHHHhcCC
Confidence 6999999999873 24565542 446899999999986
Q ss_pred hhccHHHHHHHHhhCCCCh------hhhc----cCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHH
Q 006275 516 EDWRIDDIKGLLGRCNFKA------DMLD----RKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEA 585 (652)
Q Consensus 516 ~~~~~~~~~~~L~~~~l~~------~~~~----~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~ 585 (652)
.....+++.++++..++.. +-.+ .....||||||||++|||||+++|+|||||||||+||.++.+.+++.
T Consensus 1321 ~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~ 1400 (1466)
T PTZ00265 1321 EDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKT 1400 (1466)
T ss_pred CCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHH
Confidence 6566777888777776631 1112 23457999999999999999999999999999999999999999999
Q ss_pred HHhc----CceEEEEecCHHHHHhhccEEEEEeC----CEEEeecCChhhHhh
Q 006275 586 ISEY----KGTVITVSHDRYFVKQIVNRVVEVKG----SNLQDYAGDYNVCFT 630 (652)
Q Consensus 586 l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~----g~i~~~~g~~~~~~~ 630 (652)
|.+. +.|+|+|||++..+.. ||+|++|++ |+++...|++++.++
T Consensus 1401 L~~~~~~~~~TvIiIaHRlsti~~-aD~Ivvl~~~~~~G~iv~e~Gth~eLl~ 1452 (1466)
T PTZ00265 1401 IVDIKDKADKTIITIAHRIASIKR-SDKIVVFNNPDRTGSFVQAHGTHEELLS 1452 (1466)
T ss_pred HHHHhccCCCEEEEEechHHHHHh-CCEEEEEeCCCCCCCEEEEecCHHHHHh
Confidence 9875 4699999999999976 999999998 886645799888765
No 31
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.6e-66 Score=642.65 Aligned_cols=206 Identities=21% Similarity=0.371 Sum_probs=174.2
Q ss_pred CCCCCcEEEEEeeeeEeCC--eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc------
Q 006275 418 GRSGRSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------ 489 (652)
Q Consensus 418 ~~~~~~~i~~~~v~~~y~~--~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------ 489 (652)
.|+..+.|+++||+++|++ +++|+|+||+|++||++||||+||||||||+++|+|+++ .+|+|.+||.++.
T Consensus 1211 ~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~ 1289 (1490)
T TIGR01271 1211 CWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQT 1289 (1490)
T ss_pred CCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHH
Confidence 4666778999999999964 679999999999999999999999999999999999997 7999999999873
Q ss_pred ----cceecccccccCCCCCCHHHHHHHhhhhccHHHHHHHHhhCCCChhh------hccC----cCCCCHHHHHHHHHH
Q 006275 490 ----PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADM------LDRK----VSLLSGGEKARLAFC 555 (652)
Q Consensus 490 ----~~~~~~~~~~~~~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~------~~~~----~~~LSgGqrqrv~LA 555 (652)
..+++|+ + ..++.|+++|+... ....+++++++|+++++.... ++.. ..+||||||||+|||
T Consensus 1290 lR~~is~IpQd--p-~LF~GTIR~NLdp~-~~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LA 1365 (1490)
T TIGR01271 1290 WRKAFGVIPQK--V-FIFSGTFRKNLDPY-EQWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLA 1365 (1490)
T ss_pred HHhceEEEeCC--C-ccCccCHHHHhCcc-cCCCHHHHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHH
Confidence 1345554 3 34567999999643 245677889999998874211 1222 237999999999999
Q ss_pred HHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
|||+++|+||||||||++||.++...+++.|++. +.|||+|||+++.+.. ||||++|++|+|+++ |++++.++
T Consensus 1366 RALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-~DrIlvL~~G~ivE~-g~p~~Ll~ 1440 (1490)
T TIGR01271 1366 RSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLE-CQQFLVIEGSSVKQY-DSIQKLLN 1440 (1490)
T ss_pred HHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHh-CCEEEEEECCEEEEe-CCHHHHHc
Confidence 9999999999999999999999999999999865 3699999999999987 999999999999865 88887664
No 32
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=5e-66 Score=638.76 Aligned_cols=204 Identities=21% Similarity=0.321 Sum_probs=173.6
Q ss_pred CcEEEEEeeeeEeCC--eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------
Q 006275 422 RSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~--~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------- 489 (652)
.+.|+++||+++|++ .++|+||||+|++||++||||+||||||||+++|+|+++|++|+|.+||.++.
T Consensus 1306 ~G~I~f~nVsf~Y~~~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~ 1385 (1560)
T PTZ00243 1306 AGSLVFEGVQMRYREGLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQ 1385 (1560)
T ss_pred CCeEEEEEEEEEeCCCCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhc
Confidence 456999999999964 35999999999999999999999999999999999999999999999999873
Q ss_pred cceecccccccCCCCCCHHHHHHHhhhhccHHHHHHHHhhCCCChhh------hcc----CcCCCCHHHHHHHHHHHHHc
Q 006275 490 PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADM------LDR----KVSLLSGGEKARLAFCKFMV 559 (652)
Q Consensus 490 ~~~~~~~~~~~~~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~------~~~----~~~~LSgGqrqrv~LAral~ 559 (652)
.++++|++ ..++.|+++|+... ....+++++++++.+++.... .|. ...+||||||||+||||||+
T Consensus 1386 I~iVpQdp---~LF~gTIreNIdp~-~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL 1461 (1560)
T PTZ00243 1386 FSMIPQDP---VLFDGTVRQNVDPF-LEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALL 1461 (1560)
T ss_pred ceEECCCC---ccccccHHHHhCcc-cCCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHh
Confidence 23555543 34567999999653 345677899999998884211 122 33579999999999999999
Q ss_pred cC-CCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 560 KP-STLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 560 ~~-p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
++ |+|||||||||+||.++.+.+++.|++. +.|||+|+|+++.+.+ ||+|++|++|+|.+ .|++++.++.
T Consensus 1462 ~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~VvE-~Gt~~eLl~~ 1534 (1560)
T PTZ00243 1462 KKGSGFILMDEATANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQ-YDKIIVMDHGAVAE-MGSPRELVMN 1534 (1560)
T ss_pred cCCCCEEEEeCCCccCCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHh-CCEEEEEECCEEEE-ECCHHHHHhC
Confidence 95 8999999999999999999999999875 3699999999999976 99999999999986 5988887753
No 33
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=2.3e-66 Score=549.33 Aligned_cols=437 Identities=25% Similarity=0.386 Sum_probs=357.3
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------ceEE
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIA 164 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----------~~i~ 164 (652)
..+++++++|.|++..++++|||+|++||++||+|.||||||||+++|.|+++|++|+|.++|+. ..||
T Consensus 3 ~~l~~~~itK~f~~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~GIG 82 (501)
T COG3845 3 PALEMRGITKRFPGVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLGIG 82 (501)
T ss_pred ceEEEeccEEEcCCEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcCCc
Confidence 46999999999999999999999999999999999999999999999999999999999999863 2599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhh
Q 006275 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (652)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (652)
+|+|++.+.+++||.||+..+..... ...++.....+++.++.+
T Consensus 83 MVhQHF~Lv~~lTV~ENiiLg~e~~~------------------------------------~~~~~~~~~~~~i~~l~~ 126 (501)
T COG3845 83 MVHQHFMLVPTLTVAENIILGLEPSK------------------------------------GGLIDRRQARARIKELSE 126 (501)
T ss_pred EEeeccccccccchhhhhhhcCcccc------------------------------------ccccCHHHHHHHHHHHHH
Confidence 99999999999999999964321100 001233456778889999
Q ss_pred hcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHH---ccCCCeEEEEecCHHHHHh
Q 006275 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL---GKQDVPMVIISHDRAFLDQ 321 (652)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L---~~~g~tvIivsHd~~~l~~ 321 (652)
.+||+ -..++++.+||-||||||.|-+||+.+|++|||||||+-|-|...+.|+..| ++.|+|||+|||.++++.+
T Consensus 127 ~yGl~-vdp~~~V~dLsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~ 205 (501)
T COG3845 127 RYGLP-VDPDAKVADLSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMA 205 (501)
T ss_pred HhCCC-CCccceeecCCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHH
Confidence 99997 5678999999999999999999999999999999999999999999998876 4679999999999999999
Q ss_pred hcCeEEEEcCCeEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHHHHHHhhh
Q 006275 322 LCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQI 401 (652)
Q Consensus 322 ~~d~ii~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~~ 401 (652)
+|||+.+|+.|+.+ |.++..... . ..++..-+.+ + .+
T Consensus 206 iaDrvTVLR~Gkvv---gt~~~~~~~--------------t------~~ela~lMvG-----~---------------~v 242 (501)
T COG3845 206 IADRVTVLRRGKVV---GTVDPVAET--------------T------EEELAELMVG-----R---------------EV 242 (501)
T ss_pred hhCeeEEEeCCeEE---eeecCCCCC--------------C------HHHHHHHhcC-----C---------------cc
Confidence 99999999999864 222210000 0 0001111111 0 00
Q ss_pred cccccccceEEecCCCCCCCCcEEEEEeeeeEeCC-eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeE
Q 006275 402 EKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGE 480 (652)
Q Consensus 402 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~-~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~ 480 (652)
..+.. -.+..++++++++++++..-.. ...+++|||+|.+||++||.|-.|-|-+.|+.+|+|+.+|.+|+
T Consensus 243 ~~~~~--------~~~~~pg~~vL~V~~L~v~~~~~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~ 314 (501)
T COG3845 243 VLRVV--------KPPSTPGEVVLEVEDLSVKDRRGVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGR 314 (501)
T ss_pred ccccc--------cCCCCCCCeEEEEeeeEeecCCCCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCce
Confidence 11000 0223466889999999987543 46799999999999999999999999999999999999999999
Q ss_pred EEECceec----cc--------ceeccc-ccccCCCCCCHHHHHHHhhhh-----------c--cHHHHHHHHhhCCCCh
Q 006275 481 VLLGEHNV----LP--------NYFEQN-QAEALDLDKTVLETVAEAAED-----------W--RIDDIKGLLGRCNFKA 534 (652)
Q Consensus 481 i~~~g~~~----~~--------~~~~~~-~~~~~~~~~tv~e~~~~~~~~-----------~--~~~~~~~~L~~~~l~~ 534 (652)
|.++|.++ .+ +|++.+ ....+.+.+|+.||+...... + ......+++++|++..
T Consensus 315 I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~ 394 (501)
T COG3845 315 ILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRA 394 (501)
T ss_pred EEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHHHHHHHcCccC
Confidence 99999986 11 344443 245677899999998765321 1 1234678899999876
Q ss_pred hhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEE
Q 006275 535 DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVV 611 (652)
Q Consensus 535 ~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi 611 (652)
.....++.+||||++||+-+||-|.++|++||..+||.|||..+.+.+.+.|.+. +.+|++||-|++++..+||||.
T Consensus 395 ~~~~~~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIa 474 (501)
T COG3845 395 PSPDAPARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIA 474 (501)
T ss_pred CCCCcchhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheee
Confidence 6677889999999999999999999999999999999999999999999988654 5699999999999999999999
Q ss_pred EEeCCEEEe
Q 006275 612 EVKGSNLQD 620 (652)
Q Consensus 612 ~l~~g~i~~ 620 (652)
+|.+|++..
T Consensus 475 Vi~~Gri~~ 483 (501)
T COG3845 475 VIYEGRIVG 483 (501)
T ss_pred eeeCCceec
Confidence 999999973
No 34
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=7.1e-67 Score=538.36 Aligned_cols=510 Identities=32% Similarity=0.557 Sum_probs=391.5
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccCccCCC
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMS 175 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~~~~~~ 175 (652)
..|.++|.+.+-.++.++.+.||.|-.|.++|||||||-||||||+-|+.-- ..+. +++.+-||.|+... ..
T Consensus 263 ~DIKiEnF~ISA~Gk~LFvnA~L~Iv~GRRYGLVGPNG~GKTTLLkHIa~Ra------laIP-pnIDvLlCEQEvva-d~ 334 (807)
T KOG0066|consen 263 MDIKIENFDISAQGKLLFVNASLTIVYGRRYGLVGPNGMGKTTLLKHIAARA------LAIP-PNIDVLLCEQEVVA-DS 334 (807)
T ss_pred ccceeeeeeeecccceeeeccceEEEecceecccCCCCCchHHHHHHHHhhh------ccCC-CCCceEeeeeeeee-cC
Confidence 3589999999998999999999999999999999999999999999997531 1111 34568899998543 44
Q ss_pred CCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccccC
Q 006275 176 RTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDR 255 (652)
Q Consensus 176 ~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~ 255 (652)
.|..+.++.+-.........-..+...++.. + ... .++..........+.+...+.+.+.+|..+||+.+..++
T Consensus 335 t~Ai~tvl~aD~kRl~lLeee~~L~~q~e~G--d-~ta---aErl~~v~~ELraiGA~sAEarARRILAGLGFskEMQ~r 408 (807)
T KOG0066|consen 335 TSAIDTVLKADKKRLALLEEEAKLMSQIEEG--D-TTA---AERLKEVADELRAIGADSAEARARRILAGLGFSKEMQER 408 (807)
T ss_pred cHHHHHHHHhhHHHHHHHHHHHHHHHHHHcC--c-hHH---HHHHHHHHHHHHHhccccchhHHHHHHhhcCCChhHhcC
Confidence 4555555432222222222222333333321 1 111 111122222233466778889999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcCCeEE
Q 006275 256 LVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGVSR 335 (652)
Q Consensus 256 ~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~ 335 (652)
|...+|||||+||+|||||+..|.+|+|||||||||.....||-++|+...+|.+|||||-.|++.+|+.||.|++.++.
T Consensus 409 Pt~kFSGGWRMRvSLARALflEPTLLMLDEPTNHLDLNAVIWLdNYLQgWkKTLLIVSHDQgFLD~VCtdIIHLD~qkLh 488 (807)
T KOG0066|consen 409 PTTKFSGGWRMRVSLARALFLEPTLLMLDEPTNHLDLNAVIWLDNYLQGWKKTLLIVSHDQGFLDSVCTDIIHLDNQKLH 488 (807)
T ss_pred CccccCCceeeehhHHHHHhcCceeeeecCCccccccceeeehhhHHhhhhheeEEEecccchHHHHHHHHhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999988999999999999999999999999999999
Q ss_pred EecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHH----HHHHHHH---------hhhc
Q 006275 336 TYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKK----LERLQEE---------EQIE 402 (652)
Q Consensus 336 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----l~~l~~~---------~~~~ 402 (652)
.|.|+|.-|-....+........|+++++.+.. +..... .+..+++. +.|-+.. ....
T Consensus 489 yYrGNY~~FKKmY~Qk~~e~~K~yekQeK~Lke-------lKa~Gk--S~KqAEkq~Ke~ltrKq~K~~~Knq~dded~g 559 (807)
T KOG0066|consen 489 YYRGNYTLFKKMYAQKMQEHEKNYEKQEKQLKE-------LKAEGK--SAKQAEKQVKEQLTRKQKKGGKKNQNDDEDAG 559 (807)
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHhcCc--chHHHHHHHHHHHHHHHHhccccccCcccccc
Confidence 999999877554333322233344444443322 111111 11111111 1111100 0000
Q ss_pred ccc-----cccceEEecCCCCCCCCcEEEEEeeeeEeC-CeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCC
Q 006275 403 KPF-----QRKQMKIRFPERGRSGRSVVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP 476 (652)
Q Consensus 403 ~~~-----~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~-~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p 476 (652)
.|+ ..-..+|.||.+.....+++-+.+|+|.|+ .++++++++|-|.--.+++||||||.||||||++|.|-+.|
T Consensus 560 apELL~RpKEY~VkF~FPep~~L~PPvLGlH~VtFgy~gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P 639 (807)
T KOG0066|consen 560 APELLQRPKEYSVKFQFPEPTKLNPPVLGLHDVTFGYPGQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDP 639 (807)
T ss_pred CHHHHhCchheEEEEecCCCCCCCCCeeecccccccCCCCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCC
Confidence 011 112346778888877889999999999995 57899999999999999999999999999999999999999
Q ss_pred CeeEEEECceecccceecccccccCCCCCCHHHHHHHhhhhccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHH
Q 006275 477 RGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCK 556 (652)
Q Consensus 477 ~~G~i~~~g~~~~~~~~~~~~~~~~~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAr 556 (652)
..|+..-+ ..+..++|.|...+.+....|..|++...... ..++++..|+.+|+..+.-.-.+..||||||.||+||-
T Consensus 640 ~~GE~RKn-hrL~iG~FdQh~~E~L~~Eetp~EyLqr~FNl-pyq~ARK~LG~fGL~sHAHTikikdLSGGQKaRValae 717 (807)
T KOG0066|consen 640 NDGELRKN-HRLRIGWFDQHANEALNGEETPVEYLQRKFNL-PYQEARKQLGTFGLASHAHTIKIKDLSGGQKARVALAE 717 (807)
T ss_pred Ccchhhcc-ceeeeechhhhhHHhhccccCHHHHHHHhcCC-ChHHHHHHhhhhhhhhccceEeeeecCCcchHHHHHHH
Confidence 99998654 34677888888777788888999988765542 35678999999999766555678899999999999999
Q ss_pred HHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
.-+..|+|||||||||+||+++...|-++|++|.+.|||||||-..|.+.-...||+++..|-+.+|++++|..
T Consensus 718 Lal~~PDvlILDEPTNNLDIESIDALaEAIney~GgVi~VsHDeRLi~eT~C~LwVvE~Q~i~eIdGdFeDYkk 791 (807)
T KOG0066|consen 718 LALGGPDVLILDEPTNNLDIESIDALAEAINEYNGGVIMVSHDERLIVETDCNLWVVENQGIDEIDGDFEDYKK 791 (807)
T ss_pred HhcCCCCEEEecCCCCCcchhhHHHHHHHHHhccCcEEEEecccceeeecCceEEEEccCChhhccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999887678899998888778899998854
No 35
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=4.2e-63 Score=607.91 Aligned_cols=206 Identities=22% Similarity=0.273 Sum_probs=178.1
Q ss_pred cEEEEEeeeeEeCC--eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------cc
Q 006275 423 SVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PN 491 (652)
Q Consensus 423 ~~i~~~~v~~~y~~--~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~ 491 (652)
.+|+++|+++.|++ +.+++|+||+|++||++||+||||||||||+|+|+|+++|++|+|.++|.++. .+
T Consensus 1936 ~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~~~~~~r~~IG 2015 (2272)
T TIGR01257 1936 DILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISDVHQNMG 2015 (2272)
T ss_pred ceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcchHHHHhhhEE
Confidence 37999999999985 57999999999999999999999999999999999999999999999998762 24
Q ss_pred eecccccccCCCCCCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeE
Q 006275 492 YFEQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (652)
Q Consensus 492 ~~~~~~~~~~~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lL 565 (652)
|.+|. ..+.+.+|++|++....... ..+.+.++++.+++. +..++++.+|||||||||+||+||+.+|+||
T Consensus 2016 y~pQ~--~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~-~~~dk~~~~LSGGqKqRLslA~ALi~~P~VL 2092 (2272)
T TIGR01257 2016 YCPQF--DAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLS-LYADRLAGTYSGGNKRKLSTAIALIGCPPLV 2092 (2272)
T ss_pred EEecc--ccCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCH-HHhcCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 55554 35667899999997643211 123456789999994 6789999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhhc
Q 006275 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTSF 632 (652)
Q Consensus 566 lLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~~ 632 (652)
||||||+|||+.+++.+.+.|++. +.|||++||++++++.+||||++|++|++. ..|++++..+..
T Consensus 2093 LLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~-~~Gs~q~Lk~~~ 2161 (2272)
T TIGR01257 2093 LLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQ-CLGTIQHLKSKF 2161 (2272)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHHHHHHHh
Confidence 999999999999999999999764 459999999999999999999999999997 468887764443
No 36
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=2.7e-60 Score=583.02 Aligned_cols=199 Identities=22% Similarity=0.316 Sum_probs=168.1
Q ss_pred cEEEEEeeeeEeC----CeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC---CCeeEEEECceecc------
Q 006275 423 SVVTIKNLEFGYE----DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK---PRGGEVLLGEHNVL------ 489 (652)
Q Consensus 423 ~~i~~~~v~~~y~----~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~---p~~G~i~~~g~~~~------ 489 (652)
.+++++||++.|+ .+.+|+|||++|++||++||+|||||||||||++|+|+.+ |++|+|.++|.++.
T Consensus 758 ~~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~~~~~~ 837 (1394)
T TIGR00956 758 DIFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDSSFQRS 837 (1394)
T ss_pred ceEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECChhhhcc
Confidence 3589999999995 4579999999999999999999999999999999999997 78999999998763
Q ss_pred cceecccccccCCCCCCHHHHHHHhhhh-----c----cHHHHHHHHhhCCCChhhhccCcC----CCCHHHHHHHHHHH
Q 006275 490 PNYFEQNQAEALDLDKTVLETVAEAAED-----W----RIDDIKGLLGRCNFKADMLDRKVS----LLSGGEKARLAFCK 556 (652)
Q Consensus 490 ~~~~~~~~~~~~~~~~tv~e~~~~~~~~-----~----~~~~~~~~L~~~~l~~~~~~~~~~----~LSgGqrqrv~LAr 556 (652)
.+|+.|+ ..+.+..||+|++.+.... . ..+.+.++++.+++. +..++.++ .|||||||||+||+
T Consensus 838 i~yv~Q~--~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~d~~v~~~~~~LSgGqrqRl~Ia~ 914 (1394)
T TIGR00956 838 IGYVQQQ--DLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEME-SYADAVVGVPGEGLNVEQRKRLTIGV 914 (1394)
T ss_pred eeeeccc--ccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCh-hhCCCeeCCCCCCCCHHHhhHHHHHH
Confidence 2455554 3456789999999875321 1 123467899999994 56788777 79999999999999
Q ss_pred HHccCCC-eEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHH-HHhhccEEEEEeCC-EEEeecCCh
Q 006275 557 FMVKPST-LLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYF-VKQIVNRVVEVKGS-NLQDYAGDY 625 (652)
Q Consensus 557 al~~~p~-lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~-i~~~~drvi~l~~g-~i~~~~g~~ 625 (652)
+|+.+|+ ||+|||||+|||..+...+.+.|++. +.|||+++|+++. +.+.||++++|++| +++ +.|+.
T Consensus 915 aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv-~~G~~ 988 (1394)
T TIGR00956 915 ELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTV-YFGDL 988 (1394)
T ss_pred HHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEE-EECCc
Confidence 9999997 99999999999999999999999865 4699999999987 45679999999987 887 45654
No 37
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.3e-57 Score=557.61 Aligned_cols=198 Identities=20% Similarity=0.312 Sum_probs=165.1
Q ss_pred EEEEEeeeeEeC-------------CeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCC--CeeEEEECceec
Q 006275 424 VVTIKNLEFGYE-------------DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP--RGGEVLLGEHNV 488 (652)
Q Consensus 424 ~i~~~~v~~~y~-------------~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p--~~G~i~~~g~~~ 488 (652)
.+.++||++..+ .+.+|+|+|++|++|++++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 488999998763 23699999999999999999999999999999999999863 789999999764
Q ss_pred c-------cceecccccccCCCCCCHHHHHHHhhhh-----c----cHHHHHHHHhhCCCChhhhccCc-----CCCCHH
Q 006275 489 L-------PNYFEQNQAEALDLDKTVLETVAEAAED-----W----RIDDIKGLLGRCNFKADMLDRKV-----SLLSGG 547 (652)
Q Consensus 489 ~-------~~~~~~~~~~~~~~~~tv~e~~~~~~~~-----~----~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgG 547 (652)
. .+|+.|+ ..+.+..||+|++.+.... . ....+.++++.+++. +..++.+ ..||||
T Consensus 947 ~~~~~~~~igyv~Q~--d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~-~~~~~~vg~~~~~~LSgG 1023 (1470)
T PLN03140 947 KQETFARISGYCEQN--DIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELD-NLKDAIVGLPGVTGLSTE 1023 (1470)
T ss_pred ChHHhhhheEEEccc--cccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCCh-hHhCCccCCCCCCCcCHH
Confidence 2 2456554 3466789999999875321 1 123467899999995 5667775 589999
Q ss_pred HHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHH-HHHhhccEEEEEeC-CEEEeec
Q 006275 548 EKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRY-FVKQIVNRVVEVKG-SNLQDYA 622 (652)
Q Consensus 548 qrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~i~~~~drvi~l~~-g~i~~~~ 622 (652)
|||||+||++|+.+|+||+|||||+|||..+...+.+.|+++ +.|||+++|+.+ .+.+.||++++|++ |+++ +.
T Consensus 1024 erkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v-~~ 1102 (1470)
T PLN03140 1024 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVI-YS 1102 (1470)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEE-EE
Confidence 999999999999999999999999999999999999999875 569999999998 47788999999986 8886 55
Q ss_pred CCh
Q 006275 623 GDY 625 (652)
Q Consensus 623 g~~ 625 (652)
|+.
T Consensus 1103 G~~ 1105 (1470)
T PLN03140 1103 GPL 1105 (1470)
T ss_pred CCc
Confidence 664
No 38
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.8e-52 Score=398.10 Aligned_cols=210 Identities=29% Similarity=0.480 Sum_probs=186.6
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------ceEEE
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAF 165 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----------~~i~~ 165 (652)
+|+++|++|+|++..+|++||++|++||+++||||+|||||||||||.|+.+|++|+|.++|.. .++|+
T Consensus 2 mi~i~~l~K~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~vGm 81 (240)
T COG1126 2 MIEIKNLSKSFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKVGM 81 (240)
T ss_pred eEEEEeeeEEeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhcCe
Confidence 5899999999999999999999999999999999999999999999999999999999999842 36999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh
Q 006275 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (652)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (652)
|+|++++++.+||.||++.+.-. ....+..+.+++..++|++
T Consensus 82 VFQ~fnLFPHlTvleNv~lap~~--------------------------------------v~~~~k~eA~~~A~~lL~~ 123 (240)
T COG1126 82 VFQQFNLFPHLTVLENVTLAPVK--------------------------------------VKKLSKAEAREKALELLEK 123 (240)
T ss_pred ecccccccccchHHHHHHhhhHH--------------------------------------HcCCCHHHHHHHHHHHHHH
Confidence 99999999999999999743210 0113344567778899999
Q ss_pred cCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHH---ccCCCeEEEEecCHHHHHhh
Q 006275 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL---GKQDVPMVIISHDRAFLDQL 322 (652)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L---~~~g~tvIivsHd~~~l~~~ 322 (652)
+|+. +..+.++.+|||||||||||||||+.+|+++|+|||||+|||+...++.+.+ .+.|.|+|+|||++.|+.++
T Consensus 124 VGL~-~ka~~yP~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~V 202 (240)
T COG1126 124 VGLA-DKADAYPAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREV 202 (240)
T ss_pred cCch-hhhhhCccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHh
Confidence 9997 6789999999999999999999999999999999999999999999888765 56799999999999999999
Q ss_pred cCeEEEEcCCeEEEecCChHHHHH
Q 006275 323 CTKIVETEMGVSRTYEGNYSQYVL 346 (652)
Q Consensus 323 ~d~ii~l~~G~~~~~~g~~~~~~~ 346 (652)
||||+++++|++. .+|+++++..
T Consensus 203 adrviFmd~G~ii-e~g~p~~~f~ 225 (240)
T COG1126 203 ADRVIFMDQGKII-EEGPPEEFFD 225 (240)
T ss_pred hheEEEeeCCEEE-EecCHHHHhc
Confidence 9999999999874 6677777654
No 39
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=8.4e-50 Score=416.01 Aligned_cols=433 Identities=26% Similarity=0.405 Sum_probs=284.7
Q ss_pred eEEEEeCCe-eeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccCccCCCCCHHH
Q 006275 102 NISKSYKGV-TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTVRE 180 (652)
Q Consensus 102 ~ls~~y~~~-~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~~~~~~~Tv~e 180 (652)
++.-+|+.. ..|-.+- ...+|+++||+|+||-||||-+++|+|++.|.=|+.. .| +-||
T Consensus 79 e~vHRYg~NgFkL~~LP-~pr~G~V~GilG~NGiGKsTalkILaGel~PNLG~~~-------------~p------p~wd 138 (591)
T COG1245 79 EVVHRYGVNGFKLYRLP-TPRPGKVVGILGPNGIGKSTALKILAGELKPNLGRYE-------------DP------PSWD 138 (591)
T ss_pred cceeeccCCceEEecCC-CCCCCcEEEEEcCCCccHHHHHHHHhCccccCCCCCC-------------CC------CCHH
Confidence 356667532 1222221 4578999999999999999999999999999877521 11 1133
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHhh----hcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccccCC
Q 006275 181 EFMSAFKEEMEIAGKLERVQKALES----AVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRL 256 (652)
Q Consensus 181 ~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~ 256 (652)
++...|... .++.+.+.+-. .......++.+...+.- ...+.+....-.-..+++++.+++. ..++|.
T Consensus 139 eVi~~FrGt-----ELq~YF~~l~~g~~r~v~K~QYVd~iPk~~KG--~v~elLk~~de~g~~devve~l~L~-nvl~r~ 210 (591)
T COG1245 139 EVIKRFRGT-----ELQNYFKKLYEGELRAVHKPQYVDLIPKVVKG--KVGELLKKVDERGKFDEVVERLGLE-NVLDRD 210 (591)
T ss_pred HHHHHhhhh-----HHHHHHHHHHcCCcceecchHHHHHHHHHhcc--hHHHHHHhhhhcCcHHHHHHHhcch-hhhhhh
Confidence 333323220 01111111100 00001111111110000 0000011111123566788899996 688999
Q ss_pred CCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCeEEEEcCCe
Q 006275 257 VASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTKIVETEMGV 333 (652)
Q Consensus 257 ~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~d~ii~l~~G~ 333 (652)
+.+|||||.||+|||.|+++++|++++|||+|.||...+-...++++ +.+++||+|.||+..++-++|.|.++- |.
T Consensus 211 v~~LSGGELQr~aIaa~l~rdADvY~FDEpsSyLDi~qRl~~ar~Irel~~~~k~ViVVEHDLavLD~lsD~vhI~Y-G~ 289 (591)
T COG1245 211 VSELSGGELQRVAIAAALLRDADVYFFDEPSSYLDIRQRLNAARVIRELAEDGKYVIVVEHDLAVLDYLSDFVHILY-GE 289 (591)
T ss_pred hhhcCchHHHHHHHHHHHhccCCEEEEcCCcccccHHHHHHHHHHHHHHhccCCeEEEEechHHHHHHhhheeEEEe-cC
Confidence 99999999999999999999999999999999999988765554443 348999999999999999999887764 22
Q ss_pred EEEe---cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCccccchhHHHHHHHHHHHHhhhcccccccc
Q 006275 334 SRTY---EGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINR-LGAGANSGRASSAEKKLERLQEEEQIEKPFQRKQ 409 (652)
Q Consensus 334 ~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 409 (652)
--+| .-+++. +.-++. |.+. .. -|.+ ......
T Consensus 290 pg~YGvvs~p~sv--------------------------r~gIN~yL~Gy-----l~-----~EN~--------R~R~~~ 325 (591)
T COG1245 290 PGVYGVVSKPKSV--------------------------RVGINEYLKGY-----LP-----EENV--------RFRPEE 325 (591)
T ss_pred CccceEeccchHH--------------------------HHHHHHHHhcc-----Cc-----hhcc--------cccccc
Confidence 1111 111110 001111 1110 00 0000 011112
Q ss_pred eEEec-CCCCCCC-CcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECcee
Q 006275 410 MKIRF-PERGRSG-RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHN 487 (652)
Q Consensus 410 ~~~~~-p~~~~~~-~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~ 487 (652)
..|.. ++..... ..+++..++.+.|++. -|.-=.=+|+.||+++++||||-||||+.++|+|.++|++|. ..+
T Consensus 326 I~F~~~~~~~~~~~~~lv~y~~~~k~~g~F-~L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~ 400 (591)
T COG1245 326 IEFEEKPPRDDKARDTLVEYPDLKKTYGDF-KLEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EED 400 (591)
T ss_pred eeeeccCcccccccceeeecchheeecCce-EEEecCCeeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Ccc
Confidence 22321 2222222 5667888888888743 222223456778999999999999999999999999999998 233
Q ss_pred cccceecccccccCCCCCCHHHHHHHhhhh-ccHH-HHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeE
Q 006275 488 VLPNYFEQNQAEALDLDKTVLETVAEAAED-WRID-DIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (652)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~tv~e~~~~~~~~-~~~~-~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lL 565 (652)
+...|-+|...+ ..+.||.+.+...... +... -..++++.+++ .+..++++.+|||||.|||+||.||.+++++.
T Consensus 401 ~~vSyKPQyI~~--~~~gtV~~~l~~~~~~~~~~s~~~~ei~~pl~l-~~i~e~~v~~LSGGELQRvaIaa~L~reADlY 477 (591)
T COG1245 401 LKVSYKPQYISP--DYDGTVEDLLRSAIRSAFGSSYFKTEIVKPLNL-EDLLERPVDELSGGELQRVAIAAALSREADLY 477 (591)
T ss_pred ceEeecceeecC--CCCCcHHHHHHHhhhhhcccchhHHhhcCccch-HHHHhcccccCCchhHHHHHHHHHhccccCEE
Confidence 444555554332 3578999888765443 2211 23456777888 47889999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeC
Q 006275 566 VLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKG 615 (652)
Q Consensus 566 lLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~ 615 (652)
|||||+++||.+.+-.+..+|+++ .+|.++|-||+.++..++||++++++
T Consensus 478 llDEPSA~LDvEqR~~vakvIRR~~e~~~kta~vVdHDi~~~dyvsDr~ivF~G 531 (591)
T COG1245 478 LLDEPSAYLDVEQRIIVAKVIRRFIENNEKTALVVDHDIYMIDYVSDRLIVFEG 531 (591)
T ss_pred EecCchhhccHHHHHHHHHHHHHHHhhcCceEEEEecceehhhhhhceEEEEec
Confidence 999999999999999888888865 46999999999999999999999974
No 40
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-50 Score=388.41 Aligned_cols=205 Identities=29% Similarity=0.440 Sum_probs=182.6
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-----------cc
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PN 491 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~ 491 (652)
++|+++||+++||+..+|+|||++|++||+++||||||||||||||+|.|+.+|++|+|.++|.++. .+
T Consensus 1 ~mi~i~~l~K~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~vG 80 (240)
T COG1126 1 MMIEIKNLSKSFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKVG 80 (240)
T ss_pred CeEEEEeeeEEeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhcC
Confidence 3699999999999999999999999999999999999999999999999999999999999997552 23
Q ss_pred eecccccccCCCCCCHHHHHHHhhh-------hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCe
Q 006275 492 YFEQNQAEALDLDKTVLETVAEAAE-------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (652)
Q Consensus 492 ~~~~~~~~~~~~~~tv~e~~~~~~~-------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~l 564 (652)
.++| ..+++|++||.||+..+.. ....+.+.++|+++|+ .+..+.+|.+|||||||||||||||+.+|++
T Consensus 81 mVFQ--~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL-~~ka~~yP~qLSGGQqQRVAIARALaM~P~v 157 (240)
T COG1126 81 MVFQ--QFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGL-ADKADAYPAQLSGGQQQRVAIARALAMDPKV 157 (240)
T ss_pred eecc--cccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCc-hhhhhhCccccCcHHHHHHHHHHHHcCCCCE
Confidence 5554 4579999999999998642 1223457889999999 4778999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 565 LVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 565 LlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
+|+|||||+|||+....+.+.++++ +.|+|+|||++.|+.+++|||++|++|++++ .|++++++..
T Consensus 158 mLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie-~g~p~~~f~~ 226 (240)
T COG1126 158 MLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIE-EGPPEEFFDN 226 (240)
T ss_pred EeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEE-ecCHHHHhcC
Confidence 9999999999999999999998865 4599999999999999999999999998885 4687776654
No 41
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-48 Score=385.05 Aligned_cols=196 Identities=30% Similarity=0.419 Sum_probs=174.4
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----ceEEEEeccCc
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----MKIAFLSQEFE 171 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----~~i~~v~Q~~~ 171 (652)
.++++++++.|++..+|+||||+|.+||+++||||+|||||||||+|+|+.+|++|+|.++|.. ..++||+|++.
T Consensus 3 ~l~i~~v~~~f~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ~~~ 82 (248)
T COG1116 3 LLEIEGVSKSFGGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQEDA 82 (248)
T ss_pred eEEEEeeEEEeCceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEeccCc
Confidence 5899999999999999999999999999999999999999999999999999999999998753 47999999999
Q ss_pred cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcc
Q 006275 172 VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTAD 251 (652)
Q Consensus 172 ~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~ 251 (652)
++|..||+||+..+.... .....+..+++.++++.+|+. .
T Consensus 83 LlPW~Tv~~NV~l~l~~~---------------------------------------~~~~~e~~~~a~~~L~~VgL~-~ 122 (248)
T COG1116 83 LLPWLTVLDNVALGLELR---------------------------------------GKSKAEARERAKELLELVGLA-G 122 (248)
T ss_pred ccchhhHHhhheehhhcc---------------------------------------ccchHhHHHHHHHHHHHcCCc-c
Confidence 999999999996432110 012223345778899999997 6
Q ss_pred cccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHH----HccCCCeEEEEecCHHHHHhhcCeEE
Q 006275 252 DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGY----LGKQDVPMVIISHDRAFLDQLCTKIV 327 (652)
Q Consensus 252 ~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~----L~~~g~tvIivsHd~~~l~~~~d~ii 327 (652)
..++++.+|||||||||+|||||+.+|+||||||||++||+.|+..+.+. +++.++|||+||||++++-.++|||+
T Consensus 123 ~~~~~P~qLSGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRiv 202 (248)
T COG1116 123 FEDKYPHQLSGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVV 202 (248)
T ss_pred hhhcCccccChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEE
Confidence 88999999999999999999999999999999999999999999887665 45678999999999999999999999
Q ss_pred EEcCC
Q 006275 328 ETEMG 332 (652)
Q Consensus 328 ~l~~G 332 (652)
+|.++
T Consensus 203 vl~~~ 207 (248)
T COG1116 203 VLSNR 207 (248)
T ss_pred EecCC
Confidence 99984
No 42
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-48 Score=381.92 Aligned_cols=211 Identities=27% Similarity=0.410 Sum_probs=187.5
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEEEE
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~~v 166 (652)
+|+++|+||.|+++++++|+||+|++||+++++||+||||||+||+|.++++|++|+|.++|.+ .+||||
T Consensus 1 MI~~~nvsk~y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGYv 80 (309)
T COG1125 1 MIEFENVSKRYGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGYV 80 (309)
T ss_pred CceeeeeehhcCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhhh
Confidence 4899999999999999999999999999999999999999999999999999999999999864 369999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhc
Q 006275 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (652)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (652)
-|...++|++||.|||..... ....+....++++.++|+.+
T Consensus 81 iQqigLFPh~Tv~eNIa~VP~---------------------------------------L~~w~k~~i~~r~~ELl~lv 121 (309)
T COG1125 81 IQQIGLFPHLTVAENIATVPK---------------------------------------LLGWDKERIKKRADELLDLV 121 (309)
T ss_pred hhhcccCCCccHHHHHHhhhh---------------------------------------hcCCCHHHHHHHHHHHHHHh
Confidence 999999999999999963210 00123445678899999999
Q ss_pred CCCc-ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHh
Q 006275 247 GFTA-DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQ 321 (652)
Q Consensus 247 gl~~-~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L----~~~g~tvIivsHd~~~l~~ 321 (652)
|+++ ++.+|++++|||||+|||.+||||+.+|+|||+||||++|||-++..|.+.+ ++.++|||+||||++++..
T Consensus 122 gL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~k 201 (309)
T COG1125 122 GLDPSEYADRYPHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALK 201 (309)
T ss_pred CCCHHHHhhcCchhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHh
Confidence 9986 5999999999999999999999999999999999999999999999998765 3579999999999999999
Q ss_pred hcCeEEEEcCCeEEEecCChHHHHHH
Q 006275 322 LCTKIVETEMGVSRTYEGNYSQYVLE 347 (652)
Q Consensus 322 ~~d~ii~l~~G~~~~~~g~~~~~~~~ 347 (652)
++|||++|++|++..| +++++++..
T Consensus 202 Ladri~vm~~G~i~Q~-~~P~~il~~ 226 (309)
T COG1125 202 LADRIAVMDAGEIVQY-DTPDEILAN 226 (309)
T ss_pred hhceEEEecCCeEEEe-CCHHHHHhC
Confidence 9999999999998655 556665543
No 43
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-48 Score=388.67 Aligned_cols=209 Identities=33% Similarity=0.533 Sum_probs=186.6
Q ss_pred ceEEEeEEEEeCC-----eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------
Q 006275 97 GVKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (652)
Q Consensus 97 ~i~v~~ls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------- 160 (652)
+|++++++|.|.. ..+|+||||+|++||++||||.+|||||||+|+|.++..|++|+|.++|.+
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 4899999999975 359999999999999999999999999999999999999999999999843
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
.+|||++|++.++.+.||++|++..+. ....+..+.+++
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLe---------------------------------------iag~~k~ei~~R 121 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLE---------------------------------------LAGVPKAEIKQR 121 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHh---------------------------------------hcCCCHHHHHHH
Confidence 369999999999889999999964321 011344567889
Q ss_pred HHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEec
Q 006275 239 VSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISH 314 (652)
Q Consensus 239 i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsH 314 (652)
+.++|+.+|++ +..++++.+|||||||||+|||||+.+|+|||.|||||+|||++.+.+.++|+ +.|.||++|||
T Consensus 122 V~elLelVgL~-dk~~~yP~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITH 200 (339)
T COG1135 122 VAELLELVGLS-DKADRYPAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITH 200 (339)
T ss_pred HHHHHHHcCCh-hhhccCchhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 99999999998 78999999999999999999999999999999999999999999999988874 57999999999
Q ss_pred CHHHHHhhcCeEEEEcCCeEEEecCChHHHHH
Q 006275 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQYVL 346 (652)
Q Consensus 315 d~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~~ 346 (652)
.++.+.++||||.+|++|++ +..|+..+...
T Consensus 201 Em~Vvk~ic~rVavm~~G~l-vE~G~v~~vF~ 231 (339)
T COG1135 201 EMEVVKRICDRVAVLDQGRL-VEEGTVSEVFA 231 (339)
T ss_pred hHHHHHHHhhhheEeeCCEE-EEeccHHHhhc
Confidence 99999999999999999998 57787766554
No 44
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1e-47 Score=374.25 Aligned_cols=218 Identities=23% Similarity=0.406 Sum_probs=189.4
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCc-------------
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM------------- 161 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~------------- 161 (652)
.+.|++++++++|+++.|++||||+|++||+++|+||+|||||||||+|.|+++|++|+|.++|.+.
T Consensus 6 ~~~I~vr~v~~~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir~ 85 (263)
T COG1127 6 EPLIEVRGVTKSFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIRK 85 (263)
T ss_pred cceEEEeeeeeecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHHh
Confidence 4579999999999999999999999999999999999999999999999999999999999998642
Q ss_pred eEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHH
Q 006275 162 KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (652)
Q Consensus 162 ~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (652)
++|+++|.-.++.++||+||+...+.+. ..++...+++.+..
T Consensus 86 r~GvlFQ~gALFssltV~eNVafplre~--------------------------------------~~lp~~~i~~lv~~ 127 (263)
T COG1127 86 RMGVLFQQGALFSSLTVFENVAFPLREH--------------------------------------TKLPESLIRELVLM 127 (263)
T ss_pred heeEEeeccccccccchhHhhheehHhh--------------------------------------ccCCHHHHHHHHHH
Confidence 5999999999999999999996433221 11233344555566
Q ss_pred HhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHH
Q 006275 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRA 317 (652)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~ 317 (652)
-|+.+|+.....++++++|||||++|++||||++.||++|++||||+||||.+...+.++++ +.|.|+|+||||++
T Consensus 128 KL~~VGL~~~~~~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~ 207 (263)
T COG1127 128 KLELVGLRGAAADLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD 207 (263)
T ss_pred HHHhcCCChhhhhhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH
Confidence 68899998766999999999999999999999999999999999999999999877766653 46999999999999
Q ss_pred HHHhhcCeEEEEcCCeEEEecCChHHHHHHHHHH
Q 006275 318 FLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAW 351 (652)
Q Consensus 318 ~l~~~~d~ii~l~~G~~~~~~g~~~~~~~~~~~~ 351 (652)
.+..+||||+++.+|++ .+.|+++++......|
T Consensus 208 s~~~i~Drv~~L~~gkv-~~~Gt~~el~~sd~P~ 240 (263)
T COG1127 208 SLLTIADRVAVLADGKV-IAEGTPEELLASDDPW 240 (263)
T ss_pred HHHhhhceEEEEeCCEE-EEeCCHHHHHhCCCHH
Confidence 99999999999999998 6889988876644433
No 45
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-47 Score=373.20 Aligned_cols=209 Identities=27% Similarity=0.441 Sum_probs=186.0
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------ccee
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~~ 493 (652)
||+++||++.|+++.+++++||+|++||+++++|||||||||+||+|.++++|++|+|.++|+++. .+|+
T Consensus 1 MI~~~nvsk~y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGYv 80 (309)
T COG1125 1 MIEFENVSKRYGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGYV 80 (309)
T ss_pred CceeeeeehhcCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhhh
Confidence 589999999999999999999999999999999999999999999999999999999999998863 3565
Q ss_pred cccccccCCCCCCHHHHHHHhhh--hcc----HHHHHHHHhhCCCCh-hhhccCcCCCCHHHHHHHHHHHHHccCCCeEE
Q 006275 494 EQNQAEALDLDKTVLETVAEAAE--DWR----IDDIKGLLGRCNFKA-DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (652)
Q Consensus 494 ~~~~~~~~~~~~tv~e~~~~~~~--~~~----~~~~~~~L~~~~l~~-~~~~~~~~~LSgGqrqrv~LAral~~~p~lLl 566 (652)
-| ...++|++||.+|+..... .|. ..++.++|+.+|+.. ++.+++|++|||||||||.+||||+.+|+|||
T Consensus 81 iQ--qigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP~ilL 158 (309)
T COG1125 81 IQ--QIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAADPPILL 158 (309)
T ss_pred hh--hcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCCCeEe
Confidence 54 4578999999999997643 343 345789999999975 58999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhhcCCc
Q 006275 567 LDEPTNHLDIPSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTSFSPF 635 (652)
Q Consensus 567 LDEPt~~LD~~~~~~l~~~l~~----~~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~~~~~ 635 (652)
||||+++||+-++..+++.+.+ +++|||+||||++++.+++|||.+|++|+++.| +.+++++...+..
T Consensus 159 MDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~-~~P~~il~~Pan~ 230 (309)
T COG1125 159 MDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQY-DTPDEILANPAND 230 (309)
T ss_pred ecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEe-CCHHHHHhCccHH
Confidence 9999999999999999998764 467999999999999999999999999999865 7777766555443
No 46
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-47 Score=379.91 Aligned_cols=213 Identities=27% Similarity=0.413 Sum_probs=178.8
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-------ceEEEEec
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------MKIAFLSQ 168 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-------~~i~~v~Q 168 (652)
..|+++|++++|++.++|+||||+|++|++++|+||||||||||+|+|+|+++|++|+|.+.|.. .+||||||
T Consensus 3 ~~i~v~nl~v~y~~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgYVPQ 82 (254)
T COG1121 3 PMIEVENLTVSYGNRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGYVPQ 82 (254)
T ss_pred cEEEEeeeEEEECCEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEEcCc
Confidence 46999999999997689999999999999999999999999999999999999999999998753 47999999
Q ss_pred cCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhc
Q 006275 169 EFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (652)
Q Consensus 169 ~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (652)
... ..+..||+|-++.+-.......+ .... .-.+.+.++|+.+
T Consensus 83 ~~~~d~~fP~tV~d~V~~g~~~~~g~~~----------------------------------~~~~-~d~~~v~~aL~~V 127 (254)
T COG1121 83 KSSVDRSFPITVKDVVLLGRYGKKGWFR----------------------------------RLNK-KDKEKVDEALERV 127 (254)
T ss_pred ccccCCCCCcCHHHHHHccCcccccccc----------------------------------cccH-HHHHHHHHHHHHc
Confidence 653 33567999988643211100000 0111 1256788899999
Q ss_pred CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhc
Q 006275 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLC 323 (652)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~ 323 (652)
|+. +..++++.+|||||+|||.|||||+++|++|||||||+|+|+.++..+.++|+ +.|+|||+||||++.+.++|
T Consensus 128 gm~-~~~~r~i~~LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~ 206 (254)
T COG1121 128 GME-DLRDRQIGELSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYF 206 (254)
T ss_pred Cch-hhhCCcccccCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhC
Confidence 997 79999999999999999999999999999999999999999999999988863 45999999999999999999
Q ss_pred CeEEEEcCCeEEEecCChHHHHH
Q 006275 324 TKIVETEMGVSRTYEGNYSQYVL 346 (652)
Q Consensus 324 d~ii~l~~G~~~~~~g~~~~~~~ 346 (652)
|+|+.|+... .+.|+..++..
T Consensus 207 D~vi~Ln~~~--~~~G~~~~~~~ 227 (254)
T COG1121 207 DRVICLNRHL--IASGPPEEVLT 227 (254)
T ss_pred CEEEEEcCee--EeccChhhccC
Confidence 9999998655 46787766543
No 47
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3.2e-47 Score=383.00 Aligned_cols=212 Identities=27% Similarity=0.418 Sum_probs=180.7
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEEEE
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~~v 166 (652)
.++++|++++|+++++++|+||+|++|++++|+||||||||||||+|+|+++|.+|+|.++|.+ .++|||
T Consensus 2 ~L~~~~ls~~y~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia~v 81 (258)
T COG1120 2 MLEVENLSFGYGGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLAYV 81 (258)
T ss_pred eeEEEEEEEEECCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEEEe
Confidence 4899999999999999999999999999999999999999999999999999999999999864 269999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhc
Q 006275 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (652)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (652)
||.+...+..||+|.+..+-.... ..+. ....+-++.+.+.|+.+
T Consensus 82 pQ~~~~~~~~tV~d~V~~GR~p~~----------~~~~-------------------------~~~~~D~~~v~~aL~~~ 126 (258)
T COG1120 82 PQSPSAPFGLTVYELVLLGRYPHL----------GLFG-------------------------RPSKEDEEIVEEALELL 126 (258)
T ss_pred ccCCCCCCCcEEeehHhhcCCccc----------cccc-------------------------CCCHhHHHHHHHHHHHh
Confidence 999888788999998853210000 0000 00111233567788999
Q ss_pred CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhh
Q 006275 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQL 322 (652)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~l~~~ 322 (652)
|+. +..+|++.+|||||||||.|||||+++|+||||||||++||......++++++ +.|+|||+|.||++++.++
T Consensus 127 ~~~-~la~r~~~~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ry 205 (258)
T COG1120 127 GLE-HLADRPVDELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARY 205 (258)
T ss_pred CcH-HHhcCcccccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHh
Confidence 996 78999999999999999999999999999999999999999999999988874 4689999999999999999
Q ss_pred cCeEEEEcCCeEEEecCChHHHH
Q 006275 323 CTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 323 ~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
|||++.|++|++ ...|.+.+.+
T Consensus 206 ad~~i~lk~G~i-~a~G~p~evl 227 (258)
T COG1120 206 ADHLILLKDGKI-VAQGTPEEVL 227 (258)
T ss_pred CCEEEEEECCeE-EeecCcchhc
Confidence 999999999998 4677766554
No 48
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-46 Score=374.31 Aligned_cols=206 Identities=31% Similarity=0.495 Sum_probs=182.9
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceec-------ccceecc
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV-------LPNYFEQ 495 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~-------~~~~~~~ 495 (652)
.+|+++|+++.|+++++|+||||+|++|++++|+||||||||||+|+|+|+++|.+|+|.+.|.+. ..+|++|
T Consensus 3 ~~i~v~nl~v~y~~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgYVPQ 82 (254)
T COG1121 3 PMIEVENLTVSYGNRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGYVPQ 82 (254)
T ss_pred cEEEEeeeEEEECCEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEEcCc
Confidence 469999999999866899999999999999999999999999999999999999999999988753 4679998
Q ss_pred cccccCCCCCCHHHHHHHhhhh----------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeE
Q 006275 496 NQAEALDLDKTVLETVAEAAED----------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (652)
Q Consensus 496 ~~~~~~~~~~tv~e~~~~~~~~----------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lL 565 (652)
.......+..||+|.+..+... .+.+.+.++|+++|+. ++.++++.+|||||+|||.|||||+++|++|
T Consensus 83 ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~-~~~~r~i~~LSGGQ~QRV~lARAL~~~p~ll 161 (254)
T COG1121 83 KSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGME-DLRDRQIGELSGGQKQRVLLARALAQNPDLL 161 (254)
T ss_pred ccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCch-hhhCCcccccCcHHHHHHHHHHHhccCCCEE
Confidence 7655667789999999876321 1236789999999995 8999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 566 lLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
||||||+|+|+.++..++++|.++ +.|||+||||+..+..+||+|+.|++..+ ..|++++..+.
T Consensus 162 lLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln~~~~--~~G~~~~~~~~ 228 (254)
T COG1121 162 LLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLNRHLI--ASGPPEEVLTE 228 (254)
T ss_pred EecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEcCeeE--eccChhhccCH
Confidence 999999999999999999999765 56999999999999999999999976544 56888877654
No 49
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.9e-46 Score=377.45 Aligned_cols=203 Identities=32% Similarity=0.512 Sum_probs=180.5
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------ccee
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~~ 493 (652)
+++++|++++|+++++++|+||+|++||+++|+||||||||||||+|+|+++|.+|+|.++|+++. .+|+
T Consensus 2 ~L~~~~ls~~y~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia~v 81 (258)
T COG1120 2 MLEVENLSFGYGGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLAYV 81 (258)
T ss_pred eeEEEEEEEEECCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEEEe
Confidence 589999999999999999999999999999999999999999999999999999999999998763 2567
Q ss_pred cccccccCCCCCCHHHHHHHhhh-------hcc---HHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCC
Q 006275 494 EQNQAEALDLDKTVLETVAEAAE-------DWR---IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (652)
Q Consensus 494 ~~~~~~~~~~~~tv~e~~~~~~~-------~~~---~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~ 563 (652)
+|.. ...+.+||+|.+..+.. .+. .+.+.++|+.+|+ .++.++.+.+|||||||||.|||||+++|+
T Consensus 82 pQ~~--~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~-~~la~r~~~~LSGGerQrv~iArALaQ~~~ 158 (258)
T COG1120 82 PQSP--SAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGL-EHLADRPVDELSGGERQRVLIARALAQETP 158 (258)
T ss_pred ccCC--CCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCc-HHHhcCcccccChhHHHHHHHHHHHhcCCC
Confidence 7654 45678899999987632 122 2347788999999 578999999999999999999999999999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 564 LLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 564 lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||+|||||++||+.++..+++.++++ +.|||+|.||++.+.++||++++|++|++. ..|.+++.+.
T Consensus 159 iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~-a~G~p~evlT 228 (258)
T COG1120 159 ILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIV-AQGTPEEVLT 228 (258)
T ss_pred EEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEE-eecCcchhcC
Confidence 99999999999999999999999866 369999999999999999999999999998 4688776543
No 50
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.2e-46 Score=363.79 Aligned_cols=213 Identities=31% Similarity=0.432 Sum_probs=188.4
Q ss_pred CcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceeccc-----------
Q 006275 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP----------- 490 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~----------- 490 (652)
+++|++++|+++||++.|++|+||+|++||+++|+||||||||||||+|.|+++|++|+|.++|.++..
T Consensus 6 ~~~I~vr~v~~~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir~ 85 (263)
T COG1127 6 EPLIEVRGVTKSFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIRK 85 (263)
T ss_pred cceEEEeeeeeecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHHh
Confidence 567999999999999999999999999999999999999999999999999999999999999988631
Q ss_pred --ceecccccccCCCCCCHHHHHHHhhhhc---c----HHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccC
Q 006275 491 --NYFEQNQAEALDLDKTVLETVAEAAEDW---R----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKP 561 (652)
Q Consensus 491 --~~~~~~~~~~~~~~~tv~e~~~~~~~~~---~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~ 561 (652)
+..+ |...++.++||+||+.+....+ . .+-+..-|+.+|+.....+++|++|||||++|++||||++.+
T Consensus 86 r~GvlF--Q~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~PsELSGGM~KRvaLARAiald 163 (263)
T COG1127 86 RMGVLF--QQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYPSELSGGMRKRVALARAIALD 163 (263)
T ss_pred heeEEe--eccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCchhhcchHHHHHHHHHHHhcC
Confidence 2333 3456889999999999854322 1 123555689999987778999999999999999999999999
Q ss_pred CCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhhcCCccc
Q 006275 562 STLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTSFSPFLL 637 (652)
Q Consensus 562 p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~~~~~~~ 637 (652)
|+||++||||+||||-+...+.++|++. +.|+|+||||++.+..+|||++++.+|+|. +.|++++..+...|..+
T Consensus 164 Pell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~-~~Gt~~el~~sd~P~v~ 242 (263)
T COG1127 164 PELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVI-AEGTPEELLASDDPWVR 242 (263)
T ss_pred CCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEE-EeCCHHHHHhCCCHHHH
Confidence 9999999999999999999999988754 569999999999999999999999999998 67999999888887654
No 51
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-46 Score=369.00 Aligned_cols=191 Identities=36% Similarity=0.507 Sum_probs=172.1
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceec-----ccceecccc
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV-----LPNYFEQNQ 497 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~-----~~~~~~~~~ 497 (652)
.+++++++++.|+...+|+|+||+|.+||+++|+||||||||||||+|+|+.+|++|+|.++|.++ ..+|++|+
T Consensus 2 ~~l~i~~v~~~f~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ~- 80 (248)
T COG1116 2 ALLEIEGVSKSFGGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQE- 80 (248)
T ss_pred ceEEEEeeEEEeCceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEecc-
Confidence 358999999999999999999999999999999999999999999999999999999999999876 22466664
Q ss_pred cccCCCCCCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCC
Q 006275 498 AEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPT 571 (652)
Q Consensus 498 ~~~~~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt 571 (652)
..++|.+||.+|+.+..... ..+.+.++|+.+|+. +..+++|++|||||||||+|||||+.+|+|||||||+
T Consensus 81 -~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~-~~~~~~P~qLSGGMrQRVaiARAL~~~P~lLLlDEPF 158 (248)
T COG1116 81 -DALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLA-GFEDKYPHQLSGGMRQRVAIARALATRPKLLLLDEPF 158 (248)
T ss_pred -CcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCc-chhhcCccccChHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 56899999999999875431 234688999999994 7899999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhccEEEEEeCC
Q 006275 572 NHLDIPSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGS 616 (652)
Q Consensus 572 ~~LD~~~~~~l~~~l~~----~~~tvi~vsHd~~~i~~~~drvi~l~~g 616 (652)
++||..++..|++.+.+ .+.|||+||||++++-.++|||++|.++
T Consensus 159 gALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 159 GALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred chhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 99999999999987754 3579999999999999999999999984
No 52
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=9.5e-46 Score=365.41 Aligned_cols=197 Identities=28% Similarity=0.465 Sum_probs=169.6
Q ss_pred eEEEeEEEEeCC----eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-------------
Q 006275 98 VKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------- 160 (652)
Q Consensus 98 i~v~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------------- 160 (652)
++++|+++.|+. ..+|+++||+|++||+++|+||+||||||||++|.|+..|++|.|.++|.+
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 679999999954 369999999999999999999999999999999999999999999998742
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHH
Q 006275 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (652)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (652)
..|||++|++.+.+.+||.||+.....- . ........+++
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~---------------~------------------------~~~~~~~~~~~ 122 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLI---------------A------------------------GKSAGRRKRAA 122 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHH---------------c------------------------CCChhHHHHHH
Confidence 2599999999999999999999632110 0 00111234566
Q ss_pred HHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecC
Q 006275 240 SKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHD 315 (652)
Q Consensus 240 ~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd 315 (652)
.++++.+|+.+...++++.+|||||||||||||||+.+|++||.||||.+||.++.+.+.++|+ +.|+|||+||||
T Consensus 123 ~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd 202 (226)
T COG1136 123 EELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHD 202 (226)
T ss_pred HHHHHhcCChhhhccCCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 7888999997555558899999999999999999999999999999999999999999988874 458999999999
Q ss_pred HHHHHhhcCeEEEEcCCeE
Q 006275 316 RAFLDQLCTKIVETEMGVS 334 (652)
Q Consensus 316 ~~~l~~~~d~ii~l~~G~~ 334 (652)
.+.+ .+|||++.+.+|++
T Consensus 203 ~~lA-~~~dr~i~l~dG~~ 220 (226)
T COG1136 203 PELA-KYADRVIELKDGKI 220 (226)
T ss_pred HHHH-HhCCEEEEEeCCee
Confidence 9988 58999999999984
No 53
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-46 Score=363.56 Aligned_cols=208 Identities=30% Similarity=0.506 Sum_probs=184.8
Q ss_pred cEEEEEeeeeEeCCee----eeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceeccc--------
Q 006275 423 SVVTIKNLEFGYEDRL----LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP-------- 490 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~----vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~-------- 490 (652)
++++++|+++.|+.+. ++++|||+|.+||++||+|++|||||||.++|+|+.+|++|+|.++|.++.+
T Consensus 2 ~~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~ 81 (252)
T COG1124 2 TLLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFY 81 (252)
T ss_pred ceEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhc
Confidence 4799999999999776 9999999999999999999999999999999999999999999999976533
Q ss_pred ---ceecccccccCCCCCCHHHHHHHhhhh----ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCC
Q 006275 491 ---NYFEQNQAEALDLDKTVLETVAEAAED----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (652)
Q Consensus 491 ---~~~~~~~~~~~~~~~tv~e~~~~~~~~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~ 563 (652)
.+++|++...+.|..||.+.+...... ....++.++|+.+|+....++++|.+|||||+||+||||||+.+|+
T Consensus 82 ~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P~eLSGGQ~QRiaIARAL~~~Pk 161 (252)
T COG1124 82 RPVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRPHELSGGQRQRIAIARALIPEPK 161 (252)
T ss_pred cceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCchhcChhHHHHHHHHHHhccCCC
Confidence 356777777889999999998876542 2234589999999999999999999999999999999999999999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 564 LLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 564 lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
+||||||||+||...+..+.+++.+. +.|+|+||||+..+..+||||++|++|++++. ++..+....
T Consensus 162 lLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~-~~~~~l~~~ 232 (252)
T COG1124 162 LLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEI-GPTEELLSH 232 (252)
T ss_pred EEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEe-echhhhhcC
Confidence 99999999999999999999988654 56999999999999999999999999999863 555554443
No 54
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-45 Score=361.57 Aligned_cols=206 Identities=27% Similarity=0.490 Sum_probs=178.4
Q ss_pred CceEEEeEEEEeCCee----eeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCC-----------C
Q 006275 96 SGVKLENISKSYKGVT----VLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKS-----------N 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~----vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~-----------~ 160 (652)
.+|+++|+++.|++.. +|++|||+|.+||++||+|++|||||||+++|+|+.+|++|+|.++|. .
T Consensus 2 ~~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~ 81 (252)
T COG1124 2 TLLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFY 81 (252)
T ss_pred ceEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhc
Confidence 3699999999998876 999999999999999999999999999999999999999999999984 2
Q ss_pred ceEEEEeccC--ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 161 MKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 161 ~~i~~v~Q~~--~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
..|.+|+|+| .+.|..||++-+...+.. ......+++
T Consensus 82 ~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~-----------------------------------------~~~~~~~~~ 120 (252)
T COG1124 82 RPVQMVFQDPYSSLNPRRTVGRILSEPLRP-----------------------------------------HGLSKSQQR 120 (252)
T ss_pred cceeEEecCCccccCcchhHHHHHhhhhcc-----------------------------------------CCccHHHHH
Confidence 3599999998 455677888776532210 011233455
Q ss_pred HHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEec
Q 006275 239 VSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISH 314 (652)
Q Consensus 239 i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsH 314 (652)
+.++++.+|+++.+++|++.+|||||+|||||||||..+|++||||||||+||+.....+.++|. +++.|+|+|||
T Consensus 121 i~~~L~~VgL~~~~l~R~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsH 200 (252)
T COG1124 121 IAELLDQVGLPPSFLDRRPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISH 200 (252)
T ss_pred HHHHHHHcCCCHHHHhcCchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeC
Confidence 88999999999999999999999999999999999999999999999999999999999998873 46889999999
Q ss_pred CHHHHHhhcCeEEEEcCCeEEEecCChHH
Q 006275 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (652)
Q Consensus 315 d~~~l~~~~d~ii~l~~G~~~~~~g~~~~ 343 (652)
|+..+.++||||++|++|.++ ..+.-.+
T Consensus 201 dl~~v~~~cdRi~Vm~~G~iv-E~~~~~~ 228 (252)
T COG1124 201 DLALVEHMCDRIAVMDNGQIV-EIGPTEE 228 (252)
T ss_pred cHHHHHHHhhheeeeeCCeEE-Eeechhh
Confidence 999999999999999999984 4444333
No 55
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7.8e-46 Score=388.45 Aligned_cols=212 Identities=29% Similarity=0.442 Sum_probs=185.9
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------ceEEEEe
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLS 167 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------~~i~~v~ 167 (652)
+.|+++|++++|++..+++|+||+|++||+++|+||||||||||||+|+|+..|++|+|.++|.+ ..||+|+
T Consensus 4 ~~l~i~~v~k~yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig~VF 83 (352)
T COG3842 4 PALEIRNVSKSFGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIGMVF 83 (352)
T ss_pred ceEEEEeeeeecCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhcccceee
Confidence 46999999999999999999999999999999999999999999999999999999999999853 3699999
Q ss_pred ccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcC
Q 006275 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (652)
Q Consensus 168 Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (652)
|+..++|.+||+|||..+++.. ......++.+++.++++.++
T Consensus 84 Q~YALFPHltV~~NVafGLk~~--------------------------------------~~~~~~~i~~rv~e~L~lV~ 125 (352)
T COG3842 84 QSYALFPHMTVEENVAFGLKVR--------------------------------------KKLKKAEIKARVEEALELVG 125 (352)
T ss_pred cCcccCCCCcHHHHhhhhhhhc--------------------------------------CCCCHHHHHHHHHHHHHHcC
Confidence 9999999999999997543200 00122345678889999999
Q ss_pred CCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHhhc
Q 006275 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQLC 323 (652)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L----~~~g~tvIivsHd~~~l~~~~ 323 (652)
+. +..+|++.+|||||||||||||||+.+|++||||||+|+||..-+..+...| ++.|+|.|+||||.+++..++
T Consensus 126 L~-~~~~R~p~qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~ms 204 (352)
T COG3842 126 LE-GFADRKPHQLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMS 204 (352)
T ss_pred ch-hhhhhChhhhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhc
Confidence 97 6899999999999999999999999999999999999999999888776544 567999999999999999999
Q ss_pred CeEEEEcCCeEEEecCChHHHHHH
Q 006275 324 TKIVETEMGVSRTYEGNYSQYVLE 347 (652)
Q Consensus 324 d~ii~l~~G~~~~~~g~~~~~~~~ 347 (652)
|||++|++|++. ..|++.++...
T Consensus 205 DrI~Vm~~G~I~-Q~gtP~eiY~~ 227 (352)
T COG3842 205 DRIAVMNDGRIE-QVGTPEEIYER 227 (352)
T ss_pred cceEEccCCcee-ecCCHHHHhhC
Confidence 999999999984 55776665543
No 56
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-45 Score=370.75 Aligned_cols=202 Identities=29% Similarity=0.418 Sum_probs=178.6
Q ss_pred EEEEEeeeeEeCC-----eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------
Q 006275 424 VVTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~-----~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------- 489 (652)
||++++|++.|.. ..+++||||+|++||++||+|+||||||||+|+|.++.+|++|+|.++|.++.
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 5899999999975 46899999999999999999999999999999999999999999999998763
Q ss_pred ----cceecccccccCCCCCCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHc
Q 006275 490 ----PNYFEQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV 559 (652)
Q Consensus 490 ----~~~~~~~~~~~~~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~ 559 (652)
.++++|+ .++..++||++|+++..... ...++.++|+.+|+. +..+++|.+|||||||||+|||||+
T Consensus 81 ~R~~IGMIFQh--FnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~-dk~~~yP~qLSGGQKQRVaIARALa 157 (339)
T COG1135 81 LRQKIGMIFQH--FNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLS-DKADRYPAQLSGGQKQRVAIARALA 157 (339)
T ss_pred HHhhccEEecc--ccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCCh-hhhccCchhcCcchhhHHHHHHHHh
Confidence 2345544 56777899999999865422 235688999999995 7899999999999999999999999
Q ss_pred cCCCeEEEeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 560 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~----~~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
.+|+|||+|||||+|||++.+.+.++|++ ++.||++|||.|+.+.++||||.+|++|++++ .|+..+.+
T Consensus 158 ~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE-~G~v~~vF 230 (339)
T COG1135 158 NNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVE-EGTVSEVF 230 (339)
T ss_pred cCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEE-eccHHHhh
Confidence 99999999999999999999999998875 45699999999999999999999999999986 47666554
No 57
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-45 Score=383.94 Aligned_cols=209 Identities=29% Similarity=0.440 Sum_probs=183.8
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------ceEEEEe
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLS 167 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------~~i~~v~ 167 (652)
..|+++|+++.|++..+++++||+|+.||+++|+||||||||||||+|+|+.+|++|+|.++|.+ ..||||+
T Consensus 2 ~~i~l~~v~K~yg~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iamVF 81 (338)
T COG3839 2 AELELKNVRKSFGSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAMVF 81 (338)
T ss_pred cEEEEeeeEEEcCCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEEEe
Confidence 35999999999988769999999999999999999999999999999999999999999999853 4799999
Q ss_pred ccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcC
Q 006275 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (652)
Q Consensus 168 Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (652)
|++.++|.+||+||+...++. ..++..++++++++..+.++
T Consensus 82 Q~yALyPhmtV~~Niaf~Lk~---------------------------------------~~~~k~ei~~rV~eva~~L~ 122 (338)
T COG3839 82 QNYALYPHMTVYENIAFGLKL---------------------------------------RGVPKAEIDKRVKEVAKLLG 122 (338)
T ss_pred CCccccCCCcHHHHhhhhhhh---------------------------------------CCCchHHHHHHHHHHHHHcC
Confidence 999999999999999754321 01233466788999999999
Q ss_pred CCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHhhc
Q 006275 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQLC 323 (652)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L----~~~g~tvIivsHd~~~l~~~~ 323 (652)
+. ++++|++.+|||||||||||||||+.+|+++|||||+|+||+..+..+...+ ++.|.|+|+||||..++..++
T Consensus 123 l~-~lL~r~P~~LSGGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtla 201 (338)
T COG3839 123 LE-HLLNRKPLQLSGGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLA 201 (338)
T ss_pred Ch-hHHhcCcccCChhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhC
Confidence 97 7899999999999999999999999999999999999999999887776554 457899999999999999999
Q ss_pred CeEEEEcCCeEEEecCChHHHH
Q 006275 324 TKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 324 d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
|||++|++|.+. .-|++.+..
T Consensus 202 dri~Vm~~G~i~-Q~g~p~ely 222 (338)
T COG3839 202 DRIVVMNDGRIQ-QVGTPLELY 222 (338)
T ss_pred CEEEEEeCCeee-ecCChHHHh
Confidence 999999999984 446655543
No 58
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-45 Score=370.25 Aligned_cols=209 Identities=29% Similarity=0.466 Sum_probs=182.2
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCC-----------CceEEE
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKS-----------NMKIAF 165 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~-----------~~~i~~ 165 (652)
+|+++|+++.|+..++++|||++|+.||++||+|||||||||||++|+|++.|++|.|.++|. ..+|||
T Consensus 2 ~i~i~~~~~~~~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~VGf 81 (345)
T COG1118 2 SIRINNVKKRFGAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRKVGF 81 (345)
T ss_pred ceeehhhhhhcccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcceeE
Confidence 489999999999999999999999999999999999999999999999999999999999875 247999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh
Q 006275 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (652)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (652)
|+|+..+++.+||.+||..+..-. ....+...+..++.++|+.
T Consensus 82 vFQ~YALF~HmtVa~NIAFGl~~~-------------------------------------~~~p~~~~~r~rv~elL~l 124 (345)
T COG1118 82 VFQHYALFPHMTVADNIAFGLKVR-------------------------------------KERPSEAEIRARVEELLRL 124 (345)
T ss_pred EEechhhcccchHHhhhhhccccc-------------------------------------ccCCChhhHHHHHHHHHHH
Confidence 999999999999999997543210 0011223556788889999
Q ss_pred cCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHh
Q 006275 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQ 321 (652)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L----~~~g~tvIivsHd~~~l~~ 321 (652)
+.+. ...++++.+|||||||||||||||+.+|++||||||+++||+.-+..|..+| .+.|.|+|+||||.+++.+
T Consensus 125 vqL~-~la~ryP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ 203 (345)
T COG1118 125 VQLE-GLADRYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALE 203 (345)
T ss_pred hccc-chhhcCchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHh
Confidence 9986 6889999999999999999999999999999999999999999887776665 4569999999999999999
Q ss_pred hcCeEEEEcCCeEEEecCChHHH
Q 006275 322 LCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 322 ~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
+||||++|++|++. ..|+.++.
T Consensus 204 ladrvvvl~~G~Ie-qvg~p~ev 225 (345)
T COG1118 204 LADRVVVLNQGRIE-QVGPPDEV 225 (345)
T ss_pred hcceEEEecCCeee-eeCCHHHH
Confidence 99999999999984 44665554
No 59
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.3e-45 Score=354.35 Aligned_cols=216 Identities=24% Similarity=0.413 Sum_probs=183.1
Q ss_pred CceEEEeEEEEe-CCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-------------c
Q 006275 96 SGVKLENISKSY-KGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------M 161 (652)
Q Consensus 96 ~~i~v~~ls~~y-~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-------------~ 161 (652)
.+|+++|+++.| +++++|++|||+|++||+++|||++|||||||||+|.|+.+|++|+|.++|.. .
T Consensus 2 ~~i~~~nl~k~yp~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 2 MMIEVKNLSKTYPGGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred ceEEEeeeeeecCCCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 369999999999 66789999999999999999999999999999999999999999999998742 2
Q ss_pred eEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHH
Q 006275 162 KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (652)
Q Consensus 162 ~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (652)
+|||++|.+.+.+..+|.+|++.+.-.....+ ...+. +-..+-...+-+
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~------~slfg-------------------------lfsk~dk~~Al~ 130 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTW------RSLFG-------------------------LFSKEDKAQALD 130 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHH------HHHhC-------------------------CCCHHHHHHHHH
Confidence 69999999999999999999975432211110 00000 111122445667
Q ss_pred HhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHH
Q 006275 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRA 317 (652)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~ 317 (652)
.|+++|+. +...++..+|||||+|||+|||||+++|+|+|.|||++.|||.+.+.+++.|+ +.|.|||+..|+++
T Consensus 131 aLervgi~-~~A~qra~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vd 209 (258)
T COG3638 131 ALERVGIL-DKAYQRASTLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVD 209 (258)
T ss_pred HHHHcCcH-HHHHHHhccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHH
Confidence 89999997 56677789999999999999999999999999999999999999999998885 46999999999999
Q ss_pred HHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 318 FLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 318 ~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
.+.++||||+-|++|++ +|+|+.++.
T Consensus 210 lA~~Y~~Riigl~~G~i-vfDg~~~el 235 (258)
T COG3638 210 LAKKYADRIIGLKAGRI-VFDGPASEL 235 (258)
T ss_pred HHHHHHhhheEecCCcE-EEeCChhhh
Confidence 99999999999999998 699987664
No 60
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=7.4e-44 Score=417.14 Aligned_cols=340 Identities=22% Similarity=0.284 Sum_probs=243.4
Q ss_pred cHHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCC--CeEEEeCCCCCCCHHHHHHHHHHHc---cCCCe
Q 006275 234 TLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDP--DLLLLDEPTNHLDLDTIEWLEGYLG---KQDVP 308 (652)
Q Consensus 234 ~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p--~iLLLDEPts~LD~~~~~~l~~~L~---~~g~t 308 (652)
++..++. .|+.+|+.....++++.+|||||+|||+||+||+.+| ++|||||||+|||+..++.|.++|+ +.|.|
T Consensus 465 ~i~~rl~-~L~~vGL~~l~l~r~~~~LSgGE~QRv~LA~aL~~~~~~~llILDEPtagLd~~~~~~L~~~L~~L~~~G~T 543 (943)
T PRK00349 465 EIRERLK-FLVDVGLDYLTLSRSAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNDRLIETLKHLRDLGNT 543 (943)
T ss_pred HHHHHHH-HhhccccCCCCCCCchhhCCHHHHHHHHHHHHHhhCCCCcEEEecCCccCCCHHHHHHHHHHHHHHHhCCCE
Confidence 3445554 6888999632379999999999999999999999997 9999999999999999999988764 56899
Q ss_pred EEEEecCHHHHHhhcCeEEEE------cCCeEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhccCcc
Q 006275 309 MVIISHDRAFLDQLCTKIVET------EMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLIN-RLGAGAN 381 (652)
Q Consensus 309 vIivsHd~~~l~~~~d~ii~l------~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~ 381 (652)
||+|+|+++++. .||+|++| ++|++ .+.|+++++...... +.. .+.+
T Consensus 544 VIvVeH~~~~i~-~aD~vi~LgpgaG~~~G~i-v~~g~~~e~~~~~~~---------------------l~~~~l~~--- 597 (943)
T PRK00349 544 LIVVEHDEDTIR-AADYIVDIGPGAGVHGGEV-VASGTPEEIMKNPNS---------------------LTGQYLSG--- 597 (943)
T ss_pred EEEEeCCHHHHH-hCCEEEEeccccCCCCCEE-eeccCHHHHhcChhh---------------------eeehhhcc---
Confidence 999999999986 69999999 77776 678887665321100 000 0000
Q ss_pred ccchhHHHHHHHHHHHHhhhcccccccceEEecCCCCCCCCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCC
Q 006275 382 SGRASSAEKKLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGC 461 (652)
Q Consensus 382 ~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGs 461 (652)
+. ....+.. + .....+.|+++|++. ..|+++||+|+.|++++|+|+|||
T Consensus 598 --~~--------------~~~~~~~--------~--~~~~~~~L~v~~l~~-----~~L~~isl~Ip~GeivgVtGvsGS 646 (943)
T PRK00349 598 --KK--------------KIEVPKE--------R--RKGNGKFLKLKGARE-----NNLKNVDVEIPLGKFTCVTGVSGS 646 (943)
T ss_pred --cc--------------ccccccc--------c--cCCCcceEEecCCcc-----CCcCceEEEEeCCCEEEEEcCCCC
Confidence 00 0000000 0 001234689999862 359999999999999999999999
Q ss_pred cHHHHHHHHh---------CCCCCCee------------EEEECceecc-------------------------------
Q 006275 462 GKSTLLKLIM---------GLEKPRGG------------EVLLGEHNVL------------------------------- 489 (652)
Q Consensus 462 GKSTLl~~l~---------g~~~p~~G------------~i~~~g~~~~------------------------------- 489 (652)
|||||++-+. +...+..+ .|.++..++.
T Consensus 647 GKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~vdQ~pig~~~RS~~~Ty~g~~d~iR~lfa~~~~a~~~g 726 (943)
T PRK00349 647 GKSTLINETLYKALARKLNGAKKVPGKHKEIEGLEHLDKVIDIDQSPIGRTPRSNPATYTGVFDPIRELFAGTPEAKARG 726 (943)
T ss_pred CHHHHHHHHHHHHHHHHhcccccCCCCCcccccccCCCceEEEecCCCCCCCCCCceeeccccHHHHHHhccCccccccC
Confidence 9999998764 11111111 1222221110
Q ss_pred --cceecccc------------------------------------------------cccCCCCCCHHHHHHHhhhhcc
Q 006275 490 --PNYFEQNQ------------------------------------------------AEALDLDKTVLETVAEAAEDWR 519 (652)
Q Consensus 490 --~~~~~~~~------------------------------------------------~~~~~~~~tv~e~~~~~~~~~~ 519 (652)
+..|..|. ...-..++|+.|++.+......
T Consensus 727 ~~~~~FS~N~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~l~v~~~g~~i~dvl~ltv~E~l~~f~~~~~ 806 (943)
T PRK00349 727 YKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCDVCKGKRYNRETLEVKYKGKNIADVLDMTVEEALEFFEAIPK 806 (943)
T ss_pred CCcccCCCCCCCCCCCcccccceEEEEeccCCCccccCccccCccccccceEEEECCCCHHHHhcCcHHHHHHHHHhchh
Confidence 00111110 0000113566666665433333
Q ss_pred HHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCC---CeEEEeCCCCCCCHHHHHHHHHHHHhc---CceE
Q 006275 520 IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPS---TLLVLDEPTNHLDIPSKEMLEEAISEY---KGTV 593 (652)
Q Consensus 520 ~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p---~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tv 593 (652)
.....+.|..+|+....+++++.+||||||||+.||++|+.+| +++||||||+|||+..+..+.++|+++ +.||
T Consensus 807 i~~~l~~L~~vgL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TV 886 (943)
T PRK00349 807 IARKLQTLVDVGLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTV 886 (943)
T ss_pred hhHHHHHHHHCCCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEE
Confidence 3455678999999533468999999999999999999999999 999999999999999999999998865 4699
Q ss_pred EEEecCHHHHHhhccEEEEE------eCCEEEeecCChhhHhhhcC
Q 006275 594 ITVSHDRYFVKQIVNRVVEV------KGSNLQDYAGDYNVCFTSFS 633 (652)
Q Consensus 594 i~vsHd~~~i~~~~drvi~l------~~g~i~~~~g~~~~~~~~~~ 633 (652)
|+|||+++++. .||+|+.| ++|+++ +.|++++......
T Consensus 887 IiitH~~~~i~-~aD~ii~Lgp~~G~~~G~Iv-~~Gt~~el~~~~~ 930 (943)
T PRK00349 887 VVIEHNLDVIK-TADWIIDLGPEGGDGGGEIV-ATGTPEEVAKVEA 930 (943)
T ss_pred EEEecCHHHHH-hCCEEEEecCCcCCCCCEEE-EeCCHHHHHhCcc
Confidence 99999999986 69999999 689987 5688888765443
No 61
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=6.6e-45 Score=381.48 Aligned_cols=206 Identities=28% Similarity=0.451 Sum_probs=183.0
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------cceec
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFE 494 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~ 494 (652)
+.++++||+++|++..+++|+||+|++||+++|+||||||||||||+|+|+..|++|+|.++|+++. .++++
T Consensus 4 ~~l~i~~v~k~yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig~VF 83 (352)
T COG3842 4 PALEIRNVSKSFGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIGMVF 83 (352)
T ss_pred ceEEEEeeeeecCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhcccceee
Confidence 4699999999999999999999999999999999999999999999999999999999999999873 24555
Q ss_pred ccccccCCCCCCHHHHHHHhhh-hc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEE
Q 006275 495 QNQAEALDLDKTVLETVAEAAE-DW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (652)
Q Consensus 495 ~~~~~~~~~~~tv~e~~~~~~~-~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlL 567 (652)
| +..++|++||.+||+++.. .+ ...++.++|+.+++. ++.+++|.+|||||||||||||||+.+|++|||
T Consensus 84 Q--~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~-~~~~R~p~qLSGGQqQRVALARAL~~~P~vLLL 160 (352)
T COG3842 84 Q--SYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLE-GFADRKPHQLSGGQQQRVALARALVPEPKVLLL 160 (352)
T ss_pred c--CcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCch-hhhhhChhhhChHHHHHHHHHHHhhcCcchhhh
Confidence 5 4679999999999999865 11 124688999999995 689999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhhc
Q 006275 568 DEPTNHLDIPSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTSF 632 (652)
Q Consensus 568 DEPt~~LD~~~~~~l~~~l~~----~~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~~ 632 (652)
|||.|+||..-+..|+..+++ .+.|.|+||||.+++..++|||++|++|+|.. .|.++++....
T Consensus 161 DEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q-~gtP~eiY~~P 228 (352)
T COG3842 161 DEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQ-VGTPEEIYERP 228 (352)
T ss_pred cCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceee-cCCHHHHhhCc
Confidence 999999999999888877654 46799999999999999999999999999975 47777655443
No 62
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5.4e-44 Score=376.36 Aligned_cols=208 Identities=27% Similarity=0.436 Sum_probs=179.6
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------ceEEEE
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFL 166 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------~~i~~v 166 (652)
.+|+++|++|+|++..+|+||||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.+ .+|||+
T Consensus 6 ~~i~i~~l~k~~~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~ig~v 85 (306)
T PRK13537 6 APIDFRNVEKRYGDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRVGVV 85 (306)
T ss_pred ceEEEEeEEEEECCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcEEEE
Confidence 46999999999998889999999999999999999999999999999999999999999998753 359999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhc
Q 006275 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (652)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (652)
+|++.+++.+|++||+... ... . ..+..+...++.++++.+
T Consensus 86 ~q~~~~~~~~tv~e~l~~~-~~~--------------~------------------------~~~~~~~~~~~~~~l~~~ 126 (306)
T PRK13537 86 PQFDNLDPDFTVRENLLVF-GRY--------------F------------------------GLSAAAARALVPPLLEFA 126 (306)
T ss_pred eccCcCCCCCcHHHHHHHH-HHH--------------c------------------------CCCHHHHHHHHHHHHHHc
Confidence 9999888889999998521 000 0 011112334566788888
Q ss_pred CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhc
Q 006275 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLC 323 (652)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~~ 323 (652)
|+. +..++++.+||||||||++|||||+++|++|||||||+|||+.++.++.++|++ .|+|||++||+++++..+|
T Consensus 127 ~l~-~~~~~~~~~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~ 205 (306)
T PRK13537 127 KLE-NKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLC 205 (306)
T ss_pred CCc-hHhcCchhhCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhC
Confidence 986 567889999999999999999999999999999999999999999999988753 5899999999999999999
Q ss_pred CeEEEEcCCeEEEecCChHHH
Q 006275 324 TKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 324 d~ii~l~~G~~~~~~g~~~~~ 344 (652)
|||++|++|++ .+.|+.+++
T Consensus 206 d~i~il~~G~i-~~~g~~~~l 225 (306)
T PRK13537 206 DRLCVIEEGRK-IAEGAPHAL 225 (306)
T ss_pred CEEEEEECCEE-EEECCHHHH
Confidence 99999999998 467876554
No 63
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-44 Score=361.20 Aligned_cols=210 Identities=28% Similarity=0.447 Sum_probs=182.7
Q ss_pred CceEEEeEEEEeCCe-eeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------ceE
Q 006275 96 SGVKLENISKSYKGV-TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKI 163 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~-~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----------~~i 163 (652)
.++++++++|+|++. ++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ .+|
T Consensus 2 ~~i~~~~l~~~y~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 2 RMIEAENLSFRYPGRKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred ceEEEEEEEEEcCCCceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 358999999999776 89999999999999999999999999999999999999999999988753 359
Q ss_pred EEEeccCccC-CCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHH
Q 006275 164 AFLSQEFEVS-MSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (652)
Q Consensus 164 ~~v~Q~~~~~-~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (652)
|||+|+|..+ +..||.+++..+..+ . .++..++++++.+.
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n-----------------~----------------------g~~~~e~~~rv~~~ 122 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLEN-----------------L----------------------GLPREEIEERVAEA 122 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhh-----------------c----------------------CCCHHHHHHHHHHH
Confidence 9999999654 466999998643211 0 13334567888999
Q ss_pred hhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHH
Q 006275 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAF 318 (652)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~ 318 (652)
++.+|+. +..++++.+|||||||||+||.+|+.+|++|||||||++||+.+++.+.+++++ .|+|||++|||+++
T Consensus 123 l~~vgl~-~~~~r~p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~ 201 (235)
T COG1122 123 LELVGLE-ELLDRPPFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLEL 201 (235)
T ss_pred HHHcCch-hhccCCccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHH
Confidence 9999997 569999999999999999999999999999999999999999999999887743 37899999999999
Q ss_pred HHhhcCeEEEEcCCeEEEecCChHHHHH
Q 006275 319 LDQLCTKIVETEMGVSRTYEGNYSQYVL 346 (652)
Q Consensus 319 l~~~~d~ii~l~~G~~~~~~g~~~~~~~ 346 (652)
+..+||++++|++|++ .++|.+.++..
T Consensus 202 ~~~~ad~v~vl~~G~i-~~~g~p~~i~~ 228 (235)
T COG1122 202 VLEYADRVVVLDDGKI-LADGDPAEIFN 228 (235)
T ss_pred HHhhCCEEEEEECCEE-eecCCHHHHhh
Confidence 9999999999999998 57887655543
No 64
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=5.8e-44 Score=379.87 Aligned_cols=208 Identities=27% Similarity=0.454 Sum_probs=179.3
Q ss_pred ceEEEeEEEEeCC----eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC------------
Q 006275 97 GVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------ 160 (652)
Q Consensus 97 ~i~v~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------------ 160 (652)
+|+++|++++|++ .++|+||||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 1 mI~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~ 80 (343)
T TIGR02314 1 MIKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKA 80 (343)
T ss_pred CEEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 4899999999952 469999999999999999999999999999999999999999999998742
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHH
Q 006275 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (652)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (652)
.+|||++|++.+++..||+||+...... ...+..+..+++
T Consensus 81 r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~---------------------------------------~~~~~~~~~~~v 121 (343)
T TIGR02314 81 RRQIGMIFQHFNLLSSRTVFGNVALPLEL---------------------------------------DNTPKDEIKRKV 121 (343)
T ss_pred hcCEEEEECCccccccCcHHHHHHHHHHH---------------------------------------cCCCHHHHHHHH
Confidence 2599999999988889999998632110 001112334567
Q ss_pred HHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecC
Q 006275 240 SKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHD 315 (652)
Q Consensus 240 ~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd 315 (652)
.++++.+|+. +..++++.+|||||||||+|||||+.+|++|||||||++||+.++..+.++|++ .|.|||+|||+
T Consensus 122 ~e~l~~vgL~-~~~~~~~~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~ 200 (343)
T TIGR02314 122 TELLALVGLG-DKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHE 200 (343)
T ss_pred HHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 7889999996 678999999999999999999999999999999999999999999999888753 48999999999
Q ss_pred HHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 316 RAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 316 ~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
++.+.++||+|++|++|++. ..|+..++.
T Consensus 201 ~~~v~~~~d~v~vl~~G~iv-~~g~~~~v~ 229 (343)
T TIGR02314 201 MDVVKRICDCVAVISNGELI-EQGTVSEIF 229 (343)
T ss_pred HHHHHHhCCEEEEEECCEEE-EEcCHHHHH
Confidence 99999999999999999984 678776654
No 65
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2e-44 Score=338.66 Aligned_cols=202 Identities=28% Similarity=0.466 Sum_probs=178.6
Q ss_pred ceEEEeEEEEeCCee-eeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-------------ce
Q 006275 97 GVKLENISKSYKGVT-VLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------MK 162 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~-vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-------------~~ 162 (652)
+|+++||++.|++.+ +|+||||+|++||++.|+||+|||||||||+|.+..+|++|+|.++|.+ .+
T Consensus 1 mI~f~~V~k~Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 1 MIRFENVSKAYPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred CeeehhhhhhcCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 489999999996544 9999999999999999999999999999999999999999999998753 36
Q ss_pred EEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHH
Q 006275 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (652)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (652)
||+|+|++.+.+..||+||+..++.- ......++.+++.++
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v---------------------------------------~G~~~~~i~~rV~~~ 121 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRV---------------------------------------IGKPPREIRRRVSEV 121 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhc---------------------------------------cCCCHHHHHHHHHHH
Confidence 99999999999999999998643210 012344667889999
Q ss_pred hhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHH---ccCCCeEEEEecCHHHH
Q 006275 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL---GKQDVPMVIISHDRAFL 319 (652)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L---~~~g~tvIivsHd~~~l 319 (652)
|+.+|+. +-.+..+.+|||||||||+||||++.+|++||.||||.+|||+....+++++ .+.|.|||++|||.+.+
T Consensus 122 L~~VgL~-~k~~~lP~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv 200 (223)
T COG2884 122 LDLVGLK-HKARALPSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELV 200 (223)
T ss_pred HHHhccc-hhhhcCccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHH
Confidence 9999997 4567778999999999999999999999999999999999999999888776 46799999999999999
Q ss_pred HhhcCeEEEEcCCeEEEec
Q 006275 320 DQLCTKIVETEMGVSRTYE 338 (652)
Q Consensus 320 ~~~~d~ii~l~~G~~~~~~ 338 (652)
+++-.|++.+++|++....
T Consensus 201 ~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 201 NRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HhccCcEEEEeCCEEEecc
Confidence 9999999999999986443
No 66
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.2e-44 Score=361.75 Aligned_cols=207 Identities=29% Similarity=0.435 Sum_probs=175.5
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-------------ceEE
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------MKIA 164 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-------------~~i~ 164 (652)
|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~i~ 80 (235)
T cd03261 1 IELRGLTKSFGGRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRRMG 80 (235)
T ss_pred CeEEEEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcceE
Confidence 478999999988889999999999999999999999999999999999999999999998732 2499
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhh
Q 006275 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (652)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (652)
|++|++.+++..||.||+....... . .........++.++++
T Consensus 81 ~v~q~~~~~~~~tv~~~l~~~~~~~---------------~-----------------------~~~~~~~~~~~~~~l~ 122 (235)
T cd03261 81 MLFQSGALFDSLTVFENVAFPLREH---------------T-----------------------RLSEEEIREIVLEKLE 122 (235)
T ss_pred EEccCcccCCCCcHHHHHHHHHhhc---------------c-----------------------CCCHHHHHHHHHHHHH
Confidence 9999998877889999985321000 0 0011122345667888
Q ss_pred hcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHH
Q 006275 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLD 320 (652)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~ 320 (652)
.+|+. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.++..+.++|++ .|+|||+||||++++.
T Consensus 123 ~~~l~-~~~~~~~~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~ 201 (235)
T cd03261 123 AVGLR-GAEDLYPAELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAF 201 (235)
T ss_pred HcCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHH
Confidence 89986 566888999999999999999999999999999999999999999999888753 4889999999999999
Q ss_pred hhcCeEEEEcCCeEEEecCChHHH
Q 006275 321 QLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 321 ~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
.+||+|++|++|++ .+.|+++++
T Consensus 202 ~~~d~v~~l~~G~i-~~~g~~~~~ 224 (235)
T cd03261 202 AIADRIAVLYDGKI-VAEGTPEEL 224 (235)
T ss_pred HhcCEEEEEECCeE-EEecCHHHH
Confidence 99999999999998 466776554
No 67
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-43 Score=380.23 Aligned_cols=208 Identities=26% Similarity=0.401 Sum_probs=180.6
Q ss_pred ceEEEeEEEEe-CCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------ceEEEEe
Q 006275 97 GVKLENISKSY-KGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLS 167 (652)
Q Consensus 97 ~i~v~~ls~~y-~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------~~i~~v~ 167 (652)
+|+++|++++| +++.+|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.++|.. ..||||+
T Consensus 3 ~l~i~~l~~~~~~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v~ 82 (356)
T PRK11650 3 GLKLQAVRKSYDGKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAMVF 82 (356)
T ss_pred EEEEEeEEEEeCCCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 58999999999 77789999999999999999999999999999999999999999999998753 3699999
Q ss_pred ccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcC
Q 006275 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (652)
Q Consensus 168 Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (652)
|++.+++.+||+||+...+.. ......+...++.++++.+|
T Consensus 83 Q~~~lfp~~tv~eNi~~~~~~---------------------------------------~~~~~~~~~~~~~~~l~~~g 123 (356)
T PRK11650 83 QNYALYPHMSVRENMAYGLKI---------------------------------------RGMPKAEIEERVAEAARILE 123 (356)
T ss_pred CCccccCCCCHHHHHHhHHhh---------------------------------------cCCCHHHHHHHHHHHHHHcC
Confidence 999998999999998643210 00111223456778899999
Q ss_pred CCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhc
Q 006275 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLC 323 (652)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~l~~~~ 323 (652)
+. +..++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.+.|+ +.|.|+|+||||.+++..+|
T Consensus 124 L~-~~~~~~~~~LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~ 202 (356)
T PRK11650 124 LE-PLLDRKPRELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLA 202 (356)
T ss_pred Ch-hHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhC
Confidence 96 68899999999999999999999999999999999999999999999887764 35899999999999999999
Q ss_pred CeEEEEcCCeEEEecCChHHHH
Q 006275 324 TKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 324 d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
|+|++|++|++. ..|+++++.
T Consensus 203 D~i~vl~~G~i~-~~g~~~~~~ 223 (356)
T PRK11650 203 DRVVVMNGGVAE-QIGTPVEVY 223 (356)
T ss_pred CEEEEEeCCEEE-EECCHHHHH
Confidence 999999999984 567766653
No 68
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-43 Score=377.88 Aligned_cols=210 Identities=24% Similarity=0.383 Sum_probs=182.1
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------ceEEEE
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFL 166 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------~~i~~v 166 (652)
++.|+++|++++|++..+|+|+||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.. ..||||
T Consensus 4 ~~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v 83 (351)
T PRK11432 4 KNFVVLKNITKRFGSNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDICMV 83 (351)
T ss_pred CcEEEEEeEEEEECCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 346999999999998889999999999999999999999999999999999999999999998742 469999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhc
Q 006275 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (652)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (652)
+|++.+++.+||+||+...+... ..+..+..+++.++++.+
T Consensus 84 fQ~~~lfp~~tv~eNi~~~l~~~---------------------------------------~~~~~~~~~~v~~~l~~~ 124 (351)
T PRK11432 84 FQSYALFPHMSLGENVGYGLKML---------------------------------------GVPKEERKQRVKEALELV 124 (351)
T ss_pred eCCcccCCCCCHHHHHHHHHhHc---------------------------------------CCCHHHHHHHHHHHHHHc
Confidence 99999989999999986432100 011123345677888999
Q ss_pred CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhh
Q 006275 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQL 322 (652)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~l~~~ 322 (652)
|+. +..++++.+|||||||||+|||||+.+|++|||||||++||+.++.++.+.|+ +.|+|+|+||||.+++..+
T Consensus 125 gl~-~~~~r~~~~LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~l 203 (351)
T PRK11432 125 DLA-GFEDRYVDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAV 203 (351)
T ss_pred CCc-hhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHh
Confidence 996 57899999999999999999999999999999999999999999999987764 3589999999999999999
Q ss_pred cCeEEEEcCCeEEEecCChHHHH
Q 006275 323 CTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 323 ~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
||+|++|++|++. ..|+.+++.
T Consensus 204 aD~i~vm~~G~i~-~~g~~~~~~ 225 (351)
T PRK11432 204 SDTVIVMNKGKIM-QIGSPQELY 225 (351)
T ss_pred CCEEEEEECCEEE-EEcCHHHHH
Confidence 9999999999985 567766543
No 69
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=9.5e-44 Score=356.64 Aligned_cols=197 Identities=26% Similarity=0.444 Sum_probs=168.6
Q ss_pred ceEEEeEEEEeCC--eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-------------c
Q 006275 97 GVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------M 161 (652)
Q Consensus 97 ~i~v~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-------------~ 161 (652)
+|+++|++++|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ .
T Consensus 1 ~l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 1 MIRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred CeEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 3789999999964 469999999999999999999999999999999999999999999998742 2
Q ss_pred eEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHH
Q 006275 162 KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (652)
Q Consensus 162 ~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (652)
.++|++|++.+++..|+.||+...... . ........+++.+
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~---------------~------------------------~~~~~~~~~~~~~ 121 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRI---------------I------------------------GVPPRDANERVSA 121 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHh---------------c------------------------CCCHHHHHHHHHH
Confidence 599999999887788999998532100 0 0011122345667
Q ss_pred HhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHH
Q 006275 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAF 318 (652)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~ 318 (652)
+++.+|+. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|++ .++|||+||||+++
T Consensus 122 ~l~~~~l~-~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~ 200 (216)
T TIGR00960 122 ALEKVGLE-GKAHALPMQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINL 200 (216)
T ss_pred HHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 88889986 567888999999999999999999999999999999999999999999888753 48899999999999
Q ss_pred HHhhcCeEEEEcCCe
Q 006275 319 LDQLCTKIVETEMGV 333 (652)
Q Consensus 319 l~~~~d~ii~l~~G~ 333 (652)
+..+||+|++|++|+
T Consensus 201 ~~~~~d~i~~l~~G~ 215 (216)
T TIGR00960 201 VETYRHRTLTLSRGR 215 (216)
T ss_pred HHHhCCEEEEEeCCc
Confidence 999999999999886
No 70
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-43 Score=355.38 Aligned_cols=198 Identities=32% Similarity=0.470 Sum_probs=170.2
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------ceEEEEecc
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------~~i~~v~Q~ 169 (652)
|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|+
T Consensus 1 l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v~q~ 80 (213)
T cd03259 1 LELKGLSKTYGSVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMVFQD 80 (213)
T ss_pred CeeeeeEEEeCCeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEEcCc
Confidence 478999999988889999999999999999999999999999999999999999999998743 259999999
Q ss_pred CccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCC
Q 006275 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (652)
Q Consensus 170 ~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (652)
+.+++..|+++|+....... ........+++.++++.+|+.
T Consensus 81 ~~~~~~~tv~~~l~~~~~~~---------------------------------------~~~~~~~~~~~~~~l~~~~l~ 121 (213)
T cd03259 81 YALFPHLTVAENIAFGLKLR---------------------------------------GVPKAEIRARVRELLELVGLE 121 (213)
T ss_pred hhhccCCcHHHHHHhHHHHc---------------------------------------CCCHHHHHHHHHHHHHHcCCh
Confidence 98877889999985321100 000011234566778888986
Q ss_pred cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCe
Q 006275 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTK 325 (652)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~ 325 (652)
+..++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .|+|||++|||++++.++||+
T Consensus 122 -~~~~~~~~~LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~ 200 (213)
T cd03259 122 -GLLNRYPHELSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADR 200 (213)
T ss_pred -hhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCE
Confidence 567888999999999999999999999999999999999999999999988753 488999999999999999999
Q ss_pred EEEEcCCeEE
Q 006275 326 IVETEMGVSR 335 (652)
Q Consensus 326 ii~l~~G~~~ 335 (652)
|++|++|++.
T Consensus 201 v~~l~~G~i~ 210 (213)
T cd03259 201 IAVMNEGRIV 210 (213)
T ss_pred EEEEECCEEE
Confidence 9999999874
No 71
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1.2e-42 Score=406.22 Aligned_cols=327 Identities=24% Similarity=0.298 Sum_probs=231.3
Q ss_pred HhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCC--CeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCH
Q 006275 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDP--DLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDR 316 (652)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p--~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~ 316 (652)
.+..+|+.....++++.+|||||+|||+||+||+.+| ++|||||||+|||+..+..|.++|+ +.|.|||+|+||+
T Consensus 470 ~L~~vgL~~l~l~r~~~tLSGGE~QRv~LA~aL~~~~~~~llILDEPtagLD~~~~~~L~~~L~~L~~~G~TVIvVeHd~ 549 (924)
T TIGR00630 470 FLIDVGLDYLTLSRAAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNERLINTLKRLRDLGNTVIVVEHDE 549 (924)
T ss_pred hHhhccccccccCCCcCcCCHHHHHHHHHHHHHhhCCCCcEEEEcCCccCCCHHHHHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3677888532368999999999999999999999986 8999999999999999999988764 4689999999999
Q ss_pred HHHHhhcCeEEEE------cCCeEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhccCccccchhHHH
Q 006275 317 AFLDQLCTKIVET------EMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLIN-RLGAGANSGRASSAE 389 (652)
Q Consensus 317 ~~l~~~~d~ii~l------~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~ 389 (652)
+++. .||+|++| ++|++ .+.|++.++...... ... .+.+ ..
T Consensus 550 ~~i~-~aD~vi~LgpgaG~~~G~I-v~~g~~~el~~~~~~---------------------lt~~~l~~-----~~---- 597 (924)
T TIGR00630 550 ETIR-AADYVIDIGPGAGIHGGEV-VASGTPEEILANPDS---------------------LTGQYLSG-----KK---- 597 (924)
T ss_pred HHHh-hCCEEEEecccccCCCCEE-eeccCHHHHhcCchh---------------------eeeecccc-----cc----
Confidence 9995 89999999 67766 577776554211000 000 0000 00
Q ss_pred HHHHHHHHHhhhcccccccceEEecCCCCCCCCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHH
Q 006275 390 KKLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKL 469 (652)
Q Consensus 390 ~~l~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~ 469 (652)
....+ + . . ..+....|+++|++. ..|+|+||+|+.|++++|+|+||||||||++-
T Consensus 598 ----------~~~~~---~--~---~--~~~~~~~l~l~~~~~-----~~Lk~vsl~Ip~Geiv~VtGvsGSGKSTLl~~ 652 (924)
T TIGR00630 598 ----------KIEVP---K--E---R--RPGNGKFLTLKGARE-----NNLKNITVSIPLGLFTCITGVSGSGKSTLIND 652 (924)
T ss_pred ----------ccccc---c--c---c--cCCCcceEEEEeCcc-----CCcCceEEEEeCCCEEEEECCCCCCHHHHHHH
Confidence 00000 0 0 0 001233699999873 25999999999999999999999999999983
Q ss_pred Hh---------C-CCCCC-----ee------EEEECceecc---------------------------------cceecc
Q 006275 470 IM---------G-LEKPR-----GG------EVLLGEHNVL---------------------------------PNYFEQ 495 (652)
Q Consensus 470 l~---------g-~~~p~-----~G------~i~~~g~~~~---------------------------------~~~~~~ 495 (652)
+. + ..+|. .| .|.++..++. ++.|..
T Consensus 653 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vdQ~pi~~~~RS~~aTy~~~~d~iR~lfa~~~~a~~~g~~~~~FSf 732 (924)
T TIGR00630 653 TLYPALARRLNGAKTQPGRYKSIEGLEHLDKVIHIDQSPIGRTPRSNPATYTGVFDEIRELFAETPEAKARGYTPGRFSF 732 (924)
T ss_pred HHHHHHHHHhcccccCCCCcCccccccCCCceEEEecCCCCCCCCCchhhhhhhHHHHHHHHhcCCccccCCCChhhcCC
Confidence 32 1 11110 11 2344332210 011111
Q ss_pred ccc------------------------------------------------ccCCCCCCHHHHHHHhhhhccHHHHHHHH
Q 006275 496 NQA------------------------------------------------EALDLDKTVLETVAEAAEDWRIDDIKGLL 527 (652)
Q Consensus 496 ~~~------------------------------------------------~~~~~~~tv~e~~~~~~~~~~~~~~~~~L 527 (652)
|.. ..-..++|+.|.+.+...........+.|
T Consensus 733 N~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~l~v~~~g~~i~dvl~~tv~e~~~f~~~~~~i~~~l~~L 812 (924)
T TIGR00630 733 NVKGGRCEACQGDGVIKIEMHFLPDVYVPCEVCKGKRYNRETLEVKYKGKNIADVLDMTVEEAYEFFEAVPSISRKLQTL 812 (924)
T ss_pred CCCCCCCCCCccceEEEEEccCCCCcccCCCCcCCceeChHHHhceeCCCCHHHHhCCcHHHHHHHHHhccchhHHHHHH
Confidence 100 00012344555544433322333456788
Q ss_pred hhCCCChhhhccCcCCCCHHHHHHHHHHHHHcc---CCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHH
Q 006275 528 GRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK---PSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRY 601 (652)
Q Consensus 528 ~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~---~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~ 601 (652)
..+|+.....++++.+|||||+||++||++|+. +|+++||||||+|||+.++..+.++|+++ +.|||+|+|+++
T Consensus 813 ~~~gL~~l~l~~~~~tLSgGe~QRl~LA~aL~~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~ 892 (924)
T TIGR00630 813 CDVGLGYIKLGQPATTLSGGEAQRIKLAKELSKRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD 892 (924)
T ss_pred HHcCCCchhhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 899985334689999999999999999999997 59999999999999999999999999865 469999999999
Q ss_pred HHHhhccEEEEE------eCCEEEeecCChhh
Q 006275 602 FVKQIVNRVVEV------KGSNLQDYAGDYNV 627 (652)
Q Consensus 602 ~i~~~~drvi~l------~~g~i~~~~g~~~~ 627 (652)
++. .||++++| ++|+++ +.|++++
T Consensus 893 ~i~-~aD~ii~Lgp~~G~~gG~iv-~~G~~~~ 922 (924)
T TIGR00630 893 VIK-TADYIIDLGPEGGDGGGTIV-ASGTPEE 922 (924)
T ss_pred HHH-hCCEEEEecCCccCCCCEEE-EeCCHHH
Confidence 985 59999999 689987 4577664
No 72
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-44 Score=340.03 Aligned_cols=209 Identities=30% Similarity=0.482 Sum_probs=183.1
Q ss_pred ceEEEeEEEEeCCee-eeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------ceEEEE
Q 006275 97 GVKLENISKSYKGVT-VLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFL 166 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~-vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------~~i~~v 166 (652)
+|++.+++++|++.. +++||||++++|+++||+|+|||||||+|++|++++.|++|+|.++|.+ .+||.+
T Consensus 1 Ml~v~~l~K~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~IGVl 80 (245)
T COG4555 1 MLEVTDLTKSYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKIGVL 80 (245)
T ss_pred CeeeeehhhhccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhccee
Confidence 488999999999865 9999999999999999999999999999999999999999999998753 369999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhc
Q 006275 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (652)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (652)
+-+..++..+|++||+.. |.... .+...+++.++.++.+.|
T Consensus 81 ~~e~glY~RlT~rEnl~~-Fa~L~--------------------------------------~l~~~~~kari~~l~k~l 121 (245)
T COG4555 81 FGERGLYARLTARENLKY-FARLN--------------------------------------GLSRKEIKARIAELSKRL 121 (245)
T ss_pred cCCcChhhhhhHHHHHHH-HHHHh--------------------------------------hhhhhHHHHHHHHHHHHh
Confidence 987788889999999863 21100 012234577888899999
Q ss_pred CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHH---ccCCCeEEEEecCHHHHHhhc
Q 006275 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL---GKQDVPMVIISHDRAFLDQLC 323 (652)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L---~~~g~tvIivsHd~~~l~~~~ 323 (652)
++. +..|+.+.+||-||||||+|||||+++|++|+|||||||||..++..+.+++ ++.|++||++||+++++..+|
T Consensus 122 ~l~-~~~~rRv~~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealC 200 (245)
T COG4555 122 QLL-EYLDRRVGEFSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALC 200 (245)
T ss_pred ChH-HHHHHHHhhhchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhh
Confidence 996 7899999999999999999999999999999999999999999999998876 456999999999999999999
Q ss_pred CeEEEEcCCeEEEecCChHHHHH
Q 006275 324 TKIVETEMGVSRTYEGNYSQYVL 346 (652)
Q Consensus 324 d~ii~l~~G~~~~~~g~~~~~~~ 346 (652)
|+|+++++|.+ ++.|+.++...
T Consensus 201 Drvivlh~Gev-v~~gs~~~l~~ 222 (245)
T COG4555 201 DRVIVLHKGEV-VLEGSIEALDA 222 (245)
T ss_pred heEEEEecCcE-EEcCCHHHHHH
Confidence 99999999998 58888766543
No 73
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2.9e-43 Score=375.02 Aligned_cols=210 Identities=28% Similarity=0.440 Sum_probs=179.8
Q ss_pred CCCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------ceEE
Q 006275 94 ISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIA 164 (652)
Q Consensus 94 ~~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------~~i~ 164 (652)
...+|+++|++++|+++.+|+||||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.+ ..||
T Consensus 38 ~~~~i~i~nl~k~y~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ig 117 (340)
T PRK13536 38 STVAIDLAGVSKSYGDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARARIG 117 (340)
T ss_pred CceeEEEEEEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhccEE
Confidence 3457999999999999899999999999999999999999999999999999999999999998753 3599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhh
Q 006275 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (652)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (652)
|++|++.+++..|++||+... ... . .........++.++++
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~-~~~--------------~------------------------~~~~~~~~~~~~~ll~ 158 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVF-GRY--------------F------------------------GMSTREIEAVIPSLLE 158 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHH-HHH--------------c------------------------CCCHHHHHHHHHHHHH
Confidence 999999888889999998521 000 0 0001112334567788
Q ss_pred hcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHh
Q 006275 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQ 321 (652)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~ 321 (652)
.+|+. +..++++.+|||||||||+||+||+++|++|||||||+|||+.++.++.++|++ .|+|||++||+++++.+
T Consensus 159 ~~~L~-~~~~~~~~~LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~ 237 (340)
T PRK13536 159 FARLE-SKADARVSDLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAER 237 (340)
T ss_pred HcCCc-hhhCCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHH
Confidence 88986 567889999999999999999999999999999999999999999999988753 58999999999999999
Q ss_pred hcCeEEEEcCCeEEEecCChHHH
Q 006275 322 LCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 322 ~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
+||||++|++|++ .+.|+.+++
T Consensus 238 ~~d~i~il~~G~i-~~~g~~~~l 259 (340)
T PRK13536 238 LCDRLCVLEAGRK-IAEGRPHAL 259 (340)
T ss_pred hCCEEEEEECCEE-EEEcCHHHH
Confidence 9999999999998 467876554
No 74
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-43 Score=370.58 Aligned_cols=202 Identities=31% Similarity=0.485 Sum_probs=179.6
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceeccc--------ceecc
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP--------NYFEQ 495 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~--------~~~~~ 495 (652)
.|+++||++.||+..+++++||+|+.||+++|+||||||||||||+|+|+.+|++|+|.++|.++.. ++++|
T Consensus 3 ~i~l~~v~K~yg~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iamVFQ 82 (338)
T COG3839 3 ELELKNVRKSFGSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAMVFQ 82 (338)
T ss_pred EEEEeeeEEEcCCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEEEeC
Confidence 5899999999987669999999999999999999999999999999999999999999999987732 35555
Q ss_pred cccccCCCCCCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeC
Q 006275 496 NQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (652)
Q Consensus 496 ~~~~~~~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDE 569 (652)
+ ..++|++||++|+.+..... ...++.+..+.+++ .++++++|.+|||||||||||||||+++|+++||||
T Consensus 83 ~--yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l-~~lL~r~P~~LSGGQrQRVAlaRAlVr~P~v~L~DE 159 (338)
T COG3839 83 N--YALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGL-EHLLNRKPLQLSGGQRQRVALARALVRKPKVFLLDE 159 (338)
T ss_pred C--ccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCC-hhHHhcCcccCChhhHHHHHHHHHHhcCCCEEEecC
Confidence 4 67899999999999976532 24567888999999 578999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 570 PTNHLDIPSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 570 Pt~~LD~~~~~~l~~~l~~----~~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
|+|+||...+..+...|++ ++.|+|+||||..++..++|||++|++|+|... |.+.+..
T Consensus 160 PlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~-g~p~ely 222 (338)
T COG3839 160 PLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQV-GTPLELY 222 (338)
T ss_pred chhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeec-CChHHHh
Confidence 9999999999988887765 457999999999999999999999999999864 6665544
No 75
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2e-43 Score=369.01 Aligned_cols=207 Identities=31% Similarity=0.509 Sum_probs=178.8
Q ss_pred ceEEEeEEEEeC-CeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------ceEEEE
Q 006275 97 GVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFL 166 (652)
Q Consensus 97 ~i~v~~ls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------~~i~~v 166 (652)
.++++|+++.|+ ++.+|+||||+|++|+++||+||||||||||+|+|+|+++|++|+|.++|.+ .+|||+
T Consensus 4 ~i~~~~l~k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~igy~ 83 (293)
T COG1131 4 VIEVRNLTKKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRIGYV 83 (293)
T ss_pred eeeecceEEEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhheEEE
Confidence 488999999999 6899999999999999999999999999999999999999999999999742 259999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhc
Q 006275 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (652)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (652)
+|++.+++.+|++||+..... +.. .......+++.++++.+
T Consensus 84 ~~~~~~~~~lT~~e~l~~~~~---------------l~~------------------------~~~~~~~~~~~~~l~~~ 124 (293)
T COG1131 84 PQEPSLYPELTVRENLEFFAR---------------LYG------------------------LSKEEAEERIEELLELF 124 (293)
T ss_pred ccCCCCCccccHHHHHHHHHH---------------HhC------------------------CChhHHHHHHHHHHHHc
Confidence 999999999999999852100 000 00012345788899999
Q ss_pred CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCC-CeEEEEecCHHHHHhh
Q 006275 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQD-VPMVIISHDRAFLDQL 322 (652)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g-~tvIivsHd~~~l~~~ 322 (652)
|+.. ..++++.+||+|||||++||+||+.+|++|||||||+||||.++..+.++|+ +.| +|||++||.++.+..+
T Consensus 125 ~L~~-~~~~~~~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~ 203 (293)
T COG1131 125 GLED-KANKKVRTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEEL 203 (293)
T ss_pred CCch-hhCcchhhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHh
Confidence 9975 4578899999999999999999999999999999999999999999998875 345 7999999999999999
Q ss_pred cCeEEEEcCCeEEEecCChHHH
Q 006275 323 CTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 323 ~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
||+|+++++|++ .+.|..+++
T Consensus 204 ~d~v~il~~G~~-~~~g~~~~l 224 (293)
T COG1131 204 CDRVIILNDGKI-IAEGTPEEL 224 (293)
T ss_pred CCEEEEEeCCEE-EEeCCHHHH
Confidence 999999999998 466776654
No 76
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-44 Score=359.64 Aligned_cols=204 Identities=27% Similarity=0.416 Sum_probs=180.8
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECce---ecc--------cce
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEH---NVL--------PNY 492 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~---~~~--------~~~ 492 (652)
+|+++|+++.|+...+++|||++|+.||.+|+.||||||||||||+|+|++.|++|+|.++|. +.. .++
T Consensus 2 ~i~i~~~~~~~~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~VGf 81 (345)
T COG1118 2 SIRINNVKKRFGAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRKVGF 81 (345)
T ss_pred ceeehhhhhhcccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcceeE
Confidence 589999999999999999999999999999999999999999999999999999999999998 432 356
Q ss_pred ecccccccCCCCCCHHHHHHHhhhh--------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCe
Q 006275 493 FEQNQAEALDLDKTVLETVAEAAED--------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (652)
Q Consensus 493 ~~~~~~~~~~~~~tv~e~~~~~~~~--------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~l 564 (652)
+.|+ +.+++.+||.+||+++... ....++.++|+.+.+ ..+.+++|.+|||||||||||||||+.+|++
T Consensus 82 vFQ~--YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL-~~la~ryP~QLSGGQrQRVALARALA~eP~v 158 (345)
T COG1118 82 VFQH--YALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQL-EGLADRYPAQLSGGQRQRVALARALAVEPKV 158 (345)
T ss_pred EEec--hhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcc-cchhhcCchhcChHHHHHHHHHHHhhcCCCe
Confidence 6654 5689999999999998632 223457888999999 4789999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 565 LVLDEPTNHLDIPSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 565 LlLDEPt~~LD~~~~~~l~~~l~~----~~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
||||||+++||..-+..+...|++ ++.|+|+||||.+++.++||||++|++|+|.. .|+++++...
T Consensus 159 LLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieq-vg~p~ev~~~ 228 (345)
T COG1118 159 LLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQ-VGPPDEVYDH 228 (345)
T ss_pred EeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeee-eCCHHHHhcC
Confidence 999999999999999988888765 46799999999999999999999999999974 5777776543
No 77
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=1.3e-42 Score=421.36 Aligned_cols=328 Identities=23% Similarity=0.282 Sum_probs=234.0
Q ss_pred hhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCC--CeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHH
Q 006275 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDP--DLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRA 317 (652)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p--~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~ 317 (652)
|..+|+.....++++.+|||||+|||+||+||..+| ++|||||||+|||+..++.|.++|+ +.|.|||+||||++
T Consensus 460 L~~vGL~~L~ldR~~~tLSGGE~QRV~LAraL~~~p~g~lLILDEPTagLD~~~~~~L~~lL~~L~~~G~TVIvVeHd~~ 539 (1809)
T PRK00635 460 LIDLGLPYLTPERALATLSGGEQERTALAKHLGAELIGITYILDEPSIGLHPQDTHKLINVIKKLRDQGNTVLLVEHDEQ 539 (1809)
T ss_pred HHhccccCCCCCCchhhCCHHHHHHHHHHHHHhcCCCCcEEEEECCccCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH
Confidence 457788632368999999999999999999999999 8999999999999999999988764 46899999999999
Q ss_pred HHHhhcCeEEEEc------CCeEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHH
Q 006275 318 FLDQLCTKIVETE------MGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKK 391 (652)
Q Consensus 318 ~l~~~~d~ii~l~------~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 391 (652)
. .++||+|++|. +|++ .+.|+++++...... ....+.+.. .
T Consensus 540 v-i~~aDrVi~L~pGag~~gG~I-v~~G~~~eil~~~~~---------------------l~~~~l~~~----~------ 586 (1809)
T PRK00635 540 M-ISLADRIIDIGPGAGIFGGEV-LFNGSPREFLAKSDS---------------------LTAKYLRQE----L------ 586 (1809)
T ss_pred H-HHhCCEEEEEcCCcccCCCEE-EEecCHHHHhhChHH---------------------HHHHHhcCc----c------
Confidence 5 48999999997 4454 577877665321100 000000000 0
Q ss_pred HHHHHHHhhhcccccccceEEecCCCCCCCCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHH---
Q 006275 392 LERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLK--- 468 (652)
Q Consensus 392 l~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~--- 468 (652)
....+ .........+++++++. ..|+++||+|+.||+++|+|+||||||||++
T Consensus 587 --------~~~~~-----------~~~~~~~~~L~l~~~~~-----~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L 642 (1809)
T PRK00635 587 --------TIPIP-----------EKRTNSLGTLTLSKATK-----HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTL 642 (1809)
T ss_pred --------cccCc-----------ccccCCCCeEEEecccc-----CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHH
Confidence 00000 00001123689999863 3699999999999999999999999999999
Q ss_pred ------HHhCCCCCCee----E----EEECceec------------------c---------------cceecccc----
Q 006275 469 ------LIMGLEKPRGG----E----VLLGEHNV------------------L---------------PNYFEQNQ---- 497 (652)
Q Consensus 469 ------~l~g~~~p~~G----~----i~~~g~~~------------------~---------------~~~~~~~~---- 497 (652)
.|.|...+..+ . |.+|..++ . ...|..+.
T Consensus 643 ~~~l~~~l~~~~~~~~~i~g~~i~~vi~idQspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~ 722 (1809)
T PRK00635 643 VPAVEEFIEQGFCSNLSIQWGAISRLVHITRDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGA 722 (1809)
T ss_pred HHHHHHHhcCCCcccccccccccceeEEecCCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCC
Confidence 56665322111 1 12221111 0 00011110
Q ss_pred ---------------c------------------ccCCCCCCHHHHHHHhhhh--------ccHHHHHHHHhhCCCChhh
Q 006275 498 ---------------A------------------EALDLDKTVLETVAEAAED--------WRIDDIKGLLGRCNFKADM 536 (652)
Q Consensus 498 ---------------~------------------~~~~~~~tv~e~~~~~~~~--------~~~~~~~~~L~~~~l~~~~ 536 (652)
+ .......||.|++...... ....+..++|+.+|+. +.
T Consensus 723 C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l~~L~~vGL~-~l 801 (1809)
T PRK00635 723 CAECQGLGSITTTDNRTSIPCPSCLGKRFLPQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKIHALCSLGLD-YL 801 (1809)
T ss_pred CCcceeeEEEEEecCCceEECCccCCcccCHHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHHHHHHHcCCc-ch
Confidence 0 0122356778877654321 1112223578889984 44
Q ss_pred -hccCcCCCCHHHHHHHHHHHHHc---cCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccE
Q 006275 537 -LDRKVSLLSGGEKARLAFCKFMV---KPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNR 609 (652)
Q Consensus 537 -~~~~~~~LSgGqrqrv~LAral~---~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~dr 609 (652)
.++++.+||||||||++|||+|+ .+|++|||||||+|||+.+.+.+.++|+++ +.|||+|||+++++ .+||+
T Consensus 802 ~l~q~~~tLSGGE~QRV~LAraL~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i-~~aDr 880 (1809)
T PRK00635 802 PLGRPLSSLSGGEIQRLKLAYELLAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVV-KVADY 880 (1809)
T ss_pred hhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH-HhCCE
Confidence 68999999999999999999997 699999999999999999999999999765 46999999999999 78999
Q ss_pred EEEEe------CCEEEeecCChhhHhh
Q 006275 610 VVEVK------GSNLQDYAGDYNVCFT 630 (652)
Q Consensus 610 vi~l~------~g~i~~~~g~~~~~~~ 630 (652)
+++|. +|+++ ..|+++++..
T Consensus 881 Vi~L~p~gg~~~G~iv-~~Gtpeel~~ 906 (1809)
T PRK00635 881 VLELGPEGGNLGGYLL-ASCSPEELIH 906 (1809)
T ss_pred EEEEccCCCCCCCEEE-EeCCHHHHHh
Confidence 99996 67876 4688877654
No 78
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.8e-43 Score=376.90 Aligned_cols=209 Identities=29% Similarity=0.454 Sum_probs=182.0
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------ceEEEEe
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLS 167 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------~~i~~v~ 167 (652)
.+|+++|++++|++..+|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.++|.. ..||||+
T Consensus 3 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~v~ 82 (353)
T TIGR03265 3 PYLSIDNIRKRFGAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGIVF 82 (353)
T ss_pred cEEEEEEEEEEeCCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 35999999999998889999999999999999999999999999999999999999999998743 3599999
Q ss_pred ccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcC
Q 006275 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (652)
Q Consensus 168 Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (652)
|++.+++.+||+||+...+.. ...+..+...++.++++.+|
T Consensus 83 Q~~~lfp~~tv~eNi~~~~~~---------------------------------------~~~~~~~~~~~~~~~l~~l~ 123 (353)
T TIGR03265 83 QSYALFPNLTVADNIAYGLKN---------------------------------------RGMGRAEVAERVAELLDLVG 123 (353)
T ss_pred CCcccCCCCcHHHHHHHHHHh---------------------------------------cCCCHHHHHHHHHHHHHHcC
Confidence 999998999999998643210 00111233456778899999
Q ss_pred CCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhc
Q 006275 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLC 323 (652)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~l~~~~ 323 (652)
+. +..++++.+|||||||||+|||||+.+|++|||||||++||+.++.++.+.|+ +.+.|+|+||||.+++..+|
T Consensus 124 L~-~~~~~~~~~LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~ 202 (353)
T TIGR03265 124 LP-GSERKYPGQLSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMA 202 (353)
T ss_pred CC-chhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhC
Confidence 96 67899999999999999999999999999999999999999999999988764 35899999999999999999
Q ss_pred CeEEEEcCCeEEEecCChHHHH
Q 006275 324 TKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 324 d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
|+|++|++|++. ..|+.+++.
T Consensus 203 d~i~vl~~G~i~-~~g~~~~~~ 223 (353)
T TIGR03265 203 DRIVVMNHGVIE-QVGTPQEIY 223 (353)
T ss_pred CEEEEEECCEEE-EEcCHHHHH
Confidence 999999999984 567766554
No 79
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.4e-44 Score=345.64 Aligned_cols=202 Identities=29% Similarity=0.403 Sum_probs=179.2
Q ss_pred cEEEEEeeeeEe-CCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc------------
Q 006275 423 SVVTIKNLEFGY-EDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------ 489 (652)
Q Consensus 423 ~~i~~~~v~~~y-~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------ 489 (652)
.+|+++||++.| +++.+|++|||+|++||+++|+||||||||||||+|.|+.+|++|+|.++|.++.
T Consensus 2 ~~i~~~nl~k~yp~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 2 MMIEVKNLSKTYPGGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred ceEEEeeeeeecCCCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 479999999999 6789999999999999999999999999999999999999999999999997652
Q ss_pred -cceecccccccCCCCCCHHHHHHHhhh-----------h---ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHH
Q 006275 490 -PNYFEQNQAEALDLDKTVLETVAEAAE-----------D---WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAF 554 (652)
Q Consensus 490 -~~~~~~~~~~~~~~~~tv~e~~~~~~~-----------~---~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~L 554 (652)
.++++| ..++.+.++|++|+..+.- . .+...+.++|+++|+. +...++..+|||||||||+|
T Consensus 82 ~iGmIfQ--~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~-~~A~qra~~LSGGQQQRVaI 158 (258)
T COG3638 82 DIGMIFQ--QFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGIL-DKAYQRASTLSGGQQQRVAI 158 (258)
T ss_pred hceeEec--cCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcH-HHHHHHhccCCcchhHHHHH
Confidence 234444 4578899999999987531 1 1234577899999994 67889999999999999999
Q ss_pred HHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhH
Q 006275 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVC 628 (652)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~ 628 (652)
||||+++|+|+|.|||+++|||.+.+.+++.|++. +.|||+..|+++.+.++||||+-|++|+|+ |+|+.++.
T Consensus 159 ARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~iv-fDg~~~el 235 (258)
T COG3638 159 ARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIV-FDGPASEL 235 (258)
T ss_pred HHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEE-EeCChhhh
Confidence 99999999999999999999999999999999754 569999999999999999999999999998 88988763
No 80
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-43 Score=353.41 Aligned_cols=204 Identities=28% Similarity=0.472 Sum_probs=173.6
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------ceEEEEec
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLSQ 168 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------~~i~~v~Q 168 (652)
|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|++|
T Consensus 1 i~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 80 (220)
T cd03265 1 IEVENLVKKYGDFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGIVFQ 80 (220)
T ss_pred CEEEEEEEEECCEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEEecC
Confidence 578999999998889999999999999999999999999999999999999999999998742 25999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCC
Q 006275 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (652)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (652)
++.+++..|+++|+...... . .........++.++++.+|+
T Consensus 81 ~~~~~~~~tv~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~~l 121 (220)
T cd03265 81 DLSVDDELTGWENLYIHARL---------------Y------------------------GVPGAERRERIDELLDFVGL 121 (220)
T ss_pred CccccccCcHHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHHHHHcCC
Confidence 99887788999998521100 0 00111233456778889998
Q ss_pred CcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcC
Q 006275 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCT 324 (652)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d 324 (652)
. +..++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|++ .++|||++||+++++..+||
T Consensus 122 ~-~~~~~~~~~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d 200 (220)
T cd03265 122 L-EAADRLVKTYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCD 200 (220)
T ss_pred H-HHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC
Confidence 6 567889999999999999999999999999999999999999999999887743 48899999999999999999
Q ss_pred eEEEEcCCeEEEecCChH
Q 006275 325 KIVETEMGVSRTYEGNYS 342 (652)
Q Consensus 325 ~ii~l~~G~~~~~~g~~~ 342 (652)
+|+++++|++. ..|+.+
T Consensus 201 ~i~~l~~G~i~-~~~~~~ 217 (220)
T cd03265 201 RVAIIDHGRII-AEGTPE 217 (220)
T ss_pred EEEEEeCCEEE-EeCChH
Confidence 99999999984 445543
No 81
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=5.5e-43 Score=376.65 Aligned_cols=211 Identities=26% Similarity=0.404 Sum_probs=182.6
Q ss_pred CCCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------ceEEE
Q 006275 94 ISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAF 165 (652)
Q Consensus 94 ~~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------~~i~~ 165 (652)
..+.|+++|++++|++.++|+++||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.. ..|||
T Consensus 11 ~~~~L~l~~l~~~~~~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 90 (375)
T PRK09452 11 LSPLVELRGISKSFDGKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVNT 90 (375)
T ss_pred CCceEEEEEEEEEECCeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 4456999999999998889999999999999999999999999999999999999999999998753 35999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh
Q 006275 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (652)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (652)
++|++.+++.+||+||+...+... .....+..+++.++++.
T Consensus 91 vfQ~~~lfp~ltv~eNi~~~l~~~---------------------------------------~~~~~~~~~~~~~~l~~ 131 (375)
T PRK09452 91 VFQSYALFPHMTVFENVAFGLRMQ---------------------------------------KTPAAEITPRVMEALRM 131 (375)
T ss_pred EecCcccCCCCCHHHHHHHHHhhc---------------------------------------CCCHHHHHHHHHHHHHH
Confidence 999999999999999986432100 01112234567788889
Q ss_pred cCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHh
Q 006275 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQ 321 (652)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~l~~ 321 (652)
+|+. +..++++.+|||||||||+|||||+.+|++|||||||++||+..+..+.+.|+ +.|.|+|+||||.+++..
T Consensus 132 ~~l~-~~~~~~p~~LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~ 210 (375)
T PRK09452 132 VQLE-EFAQRKPHQLSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALT 210 (375)
T ss_pred cCCc-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH
Confidence 9996 67899999999999999999999999999999999999999999999988764 358999999999999999
Q ss_pred hcCeEEEEcCCeEEEecCChHHHH
Q 006275 322 LCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 322 ~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
+||+|++|++|++. ..|++.++.
T Consensus 211 laDri~vl~~G~i~-~~g~~~~i~ 233 (375)
T PRK09452 211 MSDRIVVMRDGRIE-QDGTPREIY 233 (375)
T ss_pred hCCEEEEEECCEEE-EEcCHHHHH
Confidence 99999999999984 567766554
No 82
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.3e-43 Score=347.35 Aligned_cols=193 Identities=35% Similarity=0.514 Sum_probs=166.9
Q ss_pred EEEEEeeeeEeCC----eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------
Q 006275 424 VVTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~----~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------- 489 (652)
+++++||++.|+. ..+|+++||+|++||+++|+|||||||||||++|.|+.+|++|.|.++|.++.
T Consensus 1 ~i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~ 80 (226)
T COG1136 1 MIELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKL 80 (226)
T ss_pred CcEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHH
Confidence 3689999999963 37999999999999999999999999999999999999999999999997763
Q ss_pred ----cceecccccccCCCCCCHHHHHHHhhh----h--ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHc
Q 006275 490 ----PNYFEQNQAEALDLDKTVLETVAEAAE----D--WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV 559 (652)
Q Consensus 490 ----~~~~~~~~~~~~~~~~tv~e~~~~~~~----~--~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~ 559 (652)
.++++|+ .++.+.+|+.||+..... . .....+..+++.+|+.....+++|.+|||||||||||||||+
T Consensus 81 R~~~iGfvFQ~--~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARAL~ 158 (226)
T COG1136 81 RRKKIGFVFQN--FNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALI 158 (226)
T ss_pred HHHhEEEECcc--CCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHHHh
Confidence 2455554 578899999999986421 1 123457788999999645445899999999999999999999
Q ss_pred cCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEE
Q 006275 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQ 619 (652)
Q Consensus 560 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~ 619 (652)
.+|+|+|.||||.+||.++.+.+.+++.+. +.||||||||...+. +|||++.|.+|++.
T Consensus 159 ~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~-~~dr~i~l~dG~~~ 221 (226)
T COG1136 159 NNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAK-YADRVIELKDGKIE 221 (226)
T ss_pred cCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHH-hCCEEEEEeCCeee
Confidence 999999999999999999999999998765 459999999998775 69999999999854
No 83
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=4.9e-43 Score=369.13 Aligned_cols=207 Identities=28% Similarity=0.428 Sum_probs=176.4
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------ceEEEEe
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLS 167 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------~~i~~v~ 167 (652)
+|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..+||++
T Consensus 4 ~i~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~v~ 83 (303)
T TIGR01288 4 AIDLVGVSKSYGDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAIGVVP 83 (303)
T ss_pred EEEEEeEEEEeCCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcEEEEe
Confidence 5999999999998889999999999999999999999999999999999999999999998742 3699999
Q ss_pred ccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcC
Q 006275 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (652)
Q Consensus 168 Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (652)
|++.+++..|++||+.... .. . ..+......++.++++.+|
T Consensus 84 q~~~~~~~~tv~e~l~~~~-~~--------------~------------------------~~~~~~~~~~~~~ll~~~~ 124 (303)
T TIGR01288 84 QFDNLDPEFTVRENLLVFG-RY--------------F------------------------GMSTREIEAVIPSLLEFAR 124 (303)
T ss_pred ccccCCcCCcHHHHHHHHH-HH--------------c------------------------CCCHHHHHHHHHHHHHHCC
Confidence 9998878899999985210 00 0 0001112334556788888
Q ss_pred CCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcC
Q 006275 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCT 324 (652)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~~d 324 (652)
+. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .|+|||++||+++++..+||
T Consensus 125 l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d 203 (303)
T TIGR01288 125 LE-SKADVRVALLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCD 203 (303)
T ss_pred Ch-hHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCC
Confidence 86 567888999999999999999999999999999999999999999999988753 58999999999999999999
Q ss_pred eEEEEcCCeEEEecCChHHH
Q 006275 325 KIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 325 ~ii~l~~G~~~~~~g~~~~~ 344 (652)
+|++|++|++ .+.|+.+++
T Consensus 204 ~i~~l~~G~i-~~~g~~~~~ 222 (303)
T TIGR01288 204 RLCVLESGRK-IAEGRPHAL 222 (303)
T ss_pred EEEEEECCEE-EEEcCHHHH
Confidence 9999999997 466775543
No 84
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-43 Score=354.19 Aligned_cols=207 Identities=34% Similarity=0.493 Sum_probs=184.4
Q ss_pred cEEEEEeeeeEeCCe-eeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-----------c
Q 006275 423 SVVTIKNLEFGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------P 490 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~-~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~ 490 (652)
.+++++++++.|++. .+|+++||+|++||+++|+|+||||||||+++|+|+++|++|.|.++|.++. .
T Consensus 2 ~~i~~~~l~~~y~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 2 RMIEAENLSFRYPGRKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred ceEEEEEEEEEcCCCceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 468999999999876 8999999999999999999999999999999999999999999999997643 4
Q ss_pred ceecccccccCCCCCCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCe
Q 006275 491 NYFEQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (652)
Q Consensus 491 ~~~~~~~~~~~~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~l 564 (652)
+++.|+++.. ++..||.+.++++.... ...++.++|..+|+. +..++++.+|||||||||+||.+|+.+|++
T Consensus 82 G~VfQnpd~q-~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~-~~~~r~p~~LSGGqkqRvaIA~vLa~~P~i 159 (235)
T COG1122 82 GLVFQNPDDQ-LFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLE-ELLDRPPFNLSGGQKQRVAIAGVLAMGPEI 159 (235)
T ss_pred EEEEECcccc-cccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCch-hhccCCccccCCcceeeHHhhHHHHcCCCE
Confidence 6788887654 46789999999875421 234578899999995 679999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhhc
Q 006275 565 LVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTSF 632 (652)
Q Consensus 565 LlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~~ 632 (652)
|||||||++||+.+++.+.+.++++ +.|+|++|||++++..+|||+++|++|++. +.|++.++++..
T Consensus 160 liLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~-~~g~p~~i~~~~ 230 (235)
T COG1122 160 LLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKIL-ADGDPAEIFNDA 230 (235)
T ss_pred EEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEe-ecCCHHHHhhhh
Confidence 9999999999999999999999876 359999999999999999999999999996 678888776654
No 85
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=7.1e-43 Score=374.42 Aligned_cols=208 Identities=25% Similarity=0.419 Sum_probs=181.1
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCC--cEEEECCCC--------ceEEEE
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDS--GNVIKAKSN--------MKIAFL 166 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~--G~i~~~~~~--------~~i~~v 166 (652)
.|+++|++++|++..+|+|+||+|++|++++|+|||||||||||++|+|+++|++ |+|.++|.. ..|+|+
T Consensus 5 ~l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ig~v 84 (362)
T TIGR03258 5 GIRIDHLRVAYGANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRGLALL 84 (362)
T ss_pred EEEEEEEEEEECCeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCCEEEE
Confidence 3899999999998889999999999999999999999999999999999999999 999998743 359999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhc
Q 006275 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (652)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (652)
+|++.+++.+||+||+...+... ..+..+...++.++++.+
T Consensus 85 fQ~~~l~p~~tv~enl~~~l~~~---------------------------------------~~~~~~~~~~v~~~l~~~ 125 (362)
T TIGR03258 85 FQNYALFPHLKVEDNVAFGLRAQ---------------------------------------KMPKADIAERVADALKLV 125 (362)
T ss_pred ECCcccCCCCcHHHHHHHHHHHc---------------------------------------CCCHHHHHHHHHHHHHhc
Confidence 99999989999999986432100 011223445677889999
Q ss_pred CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cC-CCeEEEEecCHHHHHh
Q 006275 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQ-DVPMVIISHDRAFLDQ 321 (652)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~-g~tvIivsHd~~~l~~ 321 (652)
|+. +..++++.+|||||||||+|||||+.+|++|||||||++||+..+.++.+.|+ +. |.|+|+||||++++..
T Consensus 126 gL~-~~~~~~~~~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~ 204 (362)
T TIGR03258 126 GLG-DAAAHLPAQLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALT 204 (362)
T ss_pred CCC-chhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHH
Confidence 996 67899999999999999999999999999999999999999999999988764 23 7899999999999999
Q ss_pred hcCeEEEEcCCeEEEecCChHHHH
Q 006275 322 LCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 322 ~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
+||+|++|++|++. ..|+.+++.
T Consensus 205 l~dri~vl~~G~i~-~~g~~~~~~ 227 (362)
T TIGR03258 205 LADKAGIMKDGRLA-AHGEPQALY 227 (362)
T ss_pred hCCEEEEEECCEEE-EEcCHHHHH
Confidence 99999999999984 668776654
No 86
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-43 Score=375.76 Aligned_cols=208 Identities=26% Similarity=0.420 Sum_probs=178.9
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------ceEEEEec
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQ 168 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------~~i~~v~Q 168 (652)
.|+++|++++|+++++|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.++|.. ..|+|++|
T Consensus 3 ~l~i~~l~~~~~~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~v~Q 82 (369)
T PRK11000 3 SVTLRNVTKAYGDVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGMVFQ 82 (369)
T ss_pred EEEEEEEEEEeCCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEEEeC
Confidence 4899999999998889999999999999999999999999999999999999999999998742 25999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCC
Q 006275 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (652)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (652)
++.+++.+||+||+...... . .....+..+++.++++.+|+
T Consensus 83 ~~~l~~~~tv~eni~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~lgL 123 (369)
T PRK11000 83 SYALYPHLSVAENMSFGLKL---------------A------------------------GAKKEEINQRVNQVAEVLQL 123 (369)
T ss_pred CcccCCCCCHHHHHHhHHhh---------------c------------------------CCCHHHHHHHHHHHHHHcCC
Confidence 99988889999998632110 0 00111234566788899999
Q ss_pred CcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhcC
Q 006275 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLCT 324 (652)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~l~~~~d 324 (652)
. +..++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.+.|+ +.|.|+|+||||++++..+||
T Consensus 124 ~-~~~~~~~~~LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d 202 (369)
T PRK11000 124 A-HLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLAD 202 (369)
T ss_pred h-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCC
Confidence 6 57889999999999999999999999999999999999999999999887764 348999999999999999999
Q ss_pred eEEEEcCCeEEEecCChHHHH
Q 006275 325 KIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 325 ~ii~l~~G~~~~~~g~~~~~~ 345 (652)
+|++|++|++. ..|+..++.
T Consensus 203 ~i~vl~~G~i~-~~g~~~~i~ 222 (369)
T PRK11000 203 KIVVLDAGRVA-QVGKPLELY 222 (369)
T ss_pred EEEEEECCEEE-EEcCHHHHH
Confidence 99999999984 567765543
No 87
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9e-43 Score=355.05 Aligned_cols=211 Identities=29% Similarity=0.443 Sum_probs=175.8
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------ceEEEEec
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQ 168 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------~~i~~v~Q 168 (652)
.|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|
T Consensus 2 ~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q 81 (239)
T cd03296 2 SIEVRNVSKRFGDFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFVFQ 81 (239)
T ss_pred EEEEEeEEEEECCEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEEec
Confidence 3899999999998889999999999999999999999999999999999999999999998742 25999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCC
Q 006275 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (652)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (652)
++.+++..||.||+....... . ... ..+......++.++++.+|+
T Consensus 82 ~~~~~~~~tv~e~l~~~~~~~-~----------~~~------------------------~~~~~~~~~~~~~~l~~~~l 126 (239)
T cd03296 82 HYALFRHMTVFDNVAFGLRVK-P----------RSE------------------------RPPEAEIRAKVHELLKLVQL 126 (239)
T ss_pred CCcccCCCCHHHHHhhhhhhc-c----------ccc------------------------cCCHHHHHHHHHHHHHHcCC
Confidence 998877889999985321100 0 000 00001123355677888898
Q ss_pred CcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcC
Q 006275 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCT 324 (652)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d 324 (652)
. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++.+.++|++ .|+|||++||+++++..+||
T Consensus 127 ~-~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d 205 (239)
T cd03296 127 D-WLADRYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVAD 205 (239)
T ss_pred h-hhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCC
Confidence 5 567888999999999999999999999999999999999999999999988753 38899999999999999999
Q ss_pred eEEEEcCCeEEEecCChHHH
Q 006275 325 KIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 325 ~ii~l~~G~~~~~~g~~~~~ 344 (652)
+|++|++|++. ..|+.+++
T Consensus 206 ~i~~l~~G~i~-~~~~~~~~ 224 (239)
T cd03296 206 RVVVMNKGRIE-QVGTPDEV 224 (239)
T ss_pred EEEEEECCeEE-EecCHHHH
Confidence 99999999974 56765544
No 88
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-42 Score=373.52 Aligned_cols=210 Identities=24% Similarity=0.406 Sum_probs=181.5
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------ceEEEE
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFL 166 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------~~i~~v 166 (652)
.++|+++|++++|++..+|+++||+|++|++++|+|||||||||||++|+|+++|++|+|.++|.. ..|||+
T Consensus 17 ~~~l~l~~v~~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig~v 96 (377)
T PRK11607 17 TPLLEIRNLTKSFDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPINMM 96 (377)
T ss_pred CceEEEEeEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 446999999999998889999999999999999999999999999999999999999999998753 359999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhc
Q 006275 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (652)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (652)
+|++.+++.+||.||+...+... .....+..+++.++++.+
T Consensus 97 fQ~~~lfp~ltv~eNi~~~l~~~---------------------------------------~~~~~~~~~~v~~~l~~l 137 (377)
T PRK11607 97 FQSYALFPHMTVEQNIAFGLKQD---------------------------------------KLPKAEIASRVNEMLGLV 137 (377)
T ss_pred eCCCccCCCCCHHHHHHHHHHHc---------------------------------------CCCHHHHHHHHHHHHHHc
Confidence 99999999999999986432100 011123345677889999
Q ss_pred CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHhh
Q 006275 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQL 322 (652)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L----~~~g~tvIivsHd~~~l~~~ 322 (652)
|+. +..++++.+|||||||||+|||||+.+|++|||||||++||+..++++.+.| ++.|.|+|+||||.+++..+
T Consensus 138 ~L~-~~~~~~~~~LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l 216 (377)
T PRK11607 138 HMQ-EFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTM 216 (377)
T ss_pred CCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHh
Confidence 996 6789999999999999999999999999999999999999999998887544 45689999999999999999
Q ss_pred cCeEEEEcCCeEEEecCChHHHH
Q 006275 323 CTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 323 ~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
||+|++|++|++. ..|+..++.
T Consensus 217 aDri~vl~~G~i~-~~g~~~~~~ 238 (377)
T PRK11607 217 AGRIAIMNRGKFV-QIGEPEEIY 238 (377)
T ss_pred CCEEEEEeCCEEE-EEcCHHHHH
Confidence 9999999999984 567766654
No 89
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=8.1e-43 Score=349.05 Aligned_cols=198 Identities=30% Similarity=0.464 Sum_probs=170.3
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------ceEEEEecc
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------~~i~~v~Q~ 169 (652)
|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|+
T Consensus 1 i~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~~q~ 80 (213)
T cd03301 1 VELENVTKRFGNVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMVFQN 80 (213)
T ss_pred CEEEeeEEEECCeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEEecC
Confidence 478999999998889999999999999999999999999999999999999999999998742 259999999
Q ss_pred CccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCC
Q 006275 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (652)
Q Consensus 170 ~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (652)
+.+++..|++||+...... . ........+++.++++.+|+.
T Consensus 81 ~~~~~~~tv~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~~l~ 121 (213)
T cd03301 81 YALYPHMTVYDNIAFGLKL---------------R------------------------KVPKDEIDERVREVAELLQIE 121 (213)
T ss_pred hhhccCCCHHHHHHHHHHh---------------c------------------------CCCHHHHHHHHHHHHHHcCCH
Confidence 9887788999998532100 0 001112234566778888986
Q ss_pred cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCe
Q 006275 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTK 325 (652)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~ 325 (652)
+..++++.+||||||||++|||||+.+|++|||||||+|||+.++.++.++|++ .++|||++|||++++..+||+
T Consensus 122 -~~~~~~~~~LS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~ 200 (213)
T cd03301 122 -HLLDRKPKQLSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADR 200 (213)
T ss_pred -HHHhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCe
Confidence 567888999999999999999999999999999999999999999999988743 489999999999999999999
Q ss_pred EEEEcCCeEE
Q 006275 326 IVETEMGVSR 335 (652)
Q Consensus 326 ii~l~~G~~~ 335 (652)
|+++++|++.
T Consensus 201 i~~l~~g~~~ 210 (213)
T cd03301 201 IAVMNDGQIQ 210 (213)
T ss_pred EEEEECCEEE
Confidence 9999999875
No 90
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=6.1e-43 Score=351.22 Aligned_cols=195 Identities=30% Similarity=0.501 Sum_probs=166.3
Q ss_pred eEEEeEEEEeCC----eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-------------
Q 006275 98 VKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------- 160 (652)
Q Consensus 98 i~v~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------------- 160 (652)
|+++|++++|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 478999999976 679999999999999999999999999999999999999999999998632
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHH
Q 006275 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (652)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (652)
..++|++|++.+++..|++||+...... . ........+++
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~---------------~------------------------~~~~~~~~~~~ 121 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLL---------------A------------------------GVPKKERRERA 121 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhh---------------c------------------------CCCHHHHHHHH
Confidence 2599999999887788999998532100 0 00011123456
Q ss_pred HHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecC
Q 006275 240 SKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHD 315 (652)
Q Consensus 240 ~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd 315 (652)
.++++.+|+. +..++.+.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|++ .++|||+|||+
T Consensus 122 ~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~ 200 (218)
T cd03255 122 EELLERVGLG-DRLNHYPSELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHD 200 (218)
T ss_pred HHHHHHcCCc-hhhhcChhhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 6788889996 456888999999999999999999999999999999999999999999888753 48899999999
Q ss_pred HHHHHhhcCeEEEEcCCe
Q 006275 316 RAFLDQLCTKIVETEMGV 333 (652)
Q Consensus 316 ~~~l~~~~d~ii~l~~G~ 333 (652)
++++. +||++++|++|+
T Consensus 201 ~~~~~-~~d~v~~l~~G~ 217 (218)
T cd03255 201 PELAE-YADRIIELRDGK 217 (218)
T ss_pred HHHHh-hhcEEEEeeCCc
Confidence 99997 999999999886
No 91
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.3e-42 Score=360.01 Aligned_cols=211 Identities=21% Similarity=0.317 Sum_probs=177.6
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-------------c
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------M 161 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-------------~ 161 (652)
+.+|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ .
T Consensus 5 ~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 5 ANLVDMRGVSFTRGNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred cceEEEeCeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 346999999999998889999999999999999999999999999999999999999999998742 2
Q ss_pred eEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHH
Q 006275 162 KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (652)
Q Consensus 162 ~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (652)
.++|++|++.+++..|+.||+...+... . ..+......++.+
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~--------------~------------------------~~~~~~~~~~~~~ 126 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREH--------------T------------------------QLPAPLLHSTVMM 126 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHc--------------c------------------------CCCHHHHHHHHHH
Confidence 5999999998877889999985321100 0 0000112234567
Q ss_pred HhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHH
Q 006275 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRA 317 (652)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~ 317 (652)
+++.+|+. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.+++.+.++|++ .|+|||+||||++
T Consensus 127 ~l~~~gl~-~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~ 205 (269)
T PRK11831 127 KLEAVGLR-GAAKLMPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP 205 (269)
T ss_pred HHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH
Confidence 78889986 567888999999999999999999999999999999999999999999887753 3789999999999
Q ss_pred HHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 318 FLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 318 ~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
++..+||+|++|++|++. +.|+.+++.
T Consensus 206 ~~~~~~d~v~~l~~G~i~-~~g~~~~~~ 232 (269)
T PRK11831 206 EVLSIADHAYIVADKKIV-AHGSAQALQ 232 (269)
T ss_pred HHHHhhCEEEEEECCEEE-EeCCHHHHh
Confidence 999999999999999984 667766543
No 92
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.6e-42 Score=371.13 Aligned_cols=212 Identities=29% Similarity=0.437 Sum_probs=181.0
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------ceEEEEec
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQ 168 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------~~i~~v~Q 168 (652)
.|+++|++++|++.++|+++||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.+ ..|+|++|
T Consensus 2 ~L~i~~l~~~~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~v~Q 81 (353)
T PRK10851 2 SIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQ 81 (353)
T ss_pred EEEEEEEEEEeCCeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEEEec
Confidence 4899999999998889999999999999999999999999999999999999999999998743 36999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCC
Q 006275 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (652)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (652)
++.+++.+||+||+...+... .. ....+..+..+++.++++.+|+
T Consensus 82 ~~~l~p~~tv~eni~~~~~~~--------------~~---------------------~~~~~~~~~~~~~~~~l~~~~L 126 (353)
T PRK10851 82 HYALFRHMTVFDNIAFGLTVL--------------PR---------------------RERPNAAAIKAKVTQLLEMVQL 126 (353)
T ss_pred CcccCCCCcHHHHHHhhhhhc--------------cc---------------------ccCCCHHHHHHHHHHHHHHcCC
Confidence 999988999999986332100 00 0001112334567788999999
Q ss_pred CcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhcC
Q 006275 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLCT 324 (652)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~l~~~~d 324 (652)
. +..++++.+|||||||||+|||||+.+|++|||||||++||+.++..+.+.|+ +.|+|+|+||||++++..+||
T Consensus 127 ~-~~~~~~~~~LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~D 205 (353)
T PRK10851 127 A-HLADRYPAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVAD 205 (353)
T ss_pred c-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC
Confidence 6 67899999999999999999999999999999999999999999998887764 348999999999999999999
Q ss_pred eEEEEcCCeEEEecCChHHHH
Q 006275 325 KIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 325 ~ii~l~~G~~~~~~g~~~~~~ 345 (652)
+|++|++|++. ..|+..++.
T Consensus 206 ri~vl~~G~i~-~~g~~~~i~ 225 (353)
T PRK10851 206 RVVVMSQGNIE-QAGTPDQVW 225 (353)
T ss_pred EEEEEECCEEE-EEcCHHHHH
Confidence 99999999984 667766654
No 93
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=9.2e-43 Score=348.93 Aligned_cols=197 Identities=29% Similarity=0.504 Sum_probs=168.2
Q ss_pred ceEEEeEEEEe-CCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-------------ce
Q 006275 97 GVKLENISKSY-KGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------MK 162 (652)
Q Consensus 97 ~i~v~~ls~~y-~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-------------~~ 162 (652)
+|+++|++++| +++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..
T Consensus 1 ~l~~~~l~~~~~~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 1 MIEFHNVSKAYPGGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred CEEEEeeeEEeCCCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 37899999999 46789999999999999999999999999999999999999999999998742 25
Q ss_pred EEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHH
Q 006275 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (652)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (652)
++|++|++.+++..|+.+|+...... . .......+.++.++
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~ 121 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEV---------------R------------------------GKKEREIQRRVGAA 121 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHH
Confidence 99999999887788999998532100 0 00111223456678
Q ss_pred hhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHH
Q 006275 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFL 319 (652)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l 319 (652)
++.+|+. +..++.+.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .++|||+|||+++++
T Consensus 122 l~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~ 200 (214)
T TIGR02673 122 LRQVGLE-HKADAFPEQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLV 200 (214)
T ss_pred HHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 8888986 567888999999999999999999999999999999999999999999988753 589999999999999
Q ss_pred HhhcCeEEEEcCCe
Q 006275 320 DQLCTKIVETEMGV 333 (652)
Q Consensus 320 ~~~~d~ii~l~~G~ 333 (652)
..+||++++|++|+
T Consensus 201 ~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 201 DRVAHRVIILDDGR 214 (214)
T ss_pred HHhcCEEEEecCCC
Confidence 99999999999874
No 94
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.2e-42 Score=353.25 Aligned_cols=216 Identities=28% Similarity=0.431 Sum_probs=175.9
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------ceEEEE
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAFL 166 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----------~~i~~v 166 (652)
|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v 80 (236)
T cd03219 1 LEVRGLTKRFGGLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIGRT 80 (236)
T ss_pred CeeeeeEEEECCEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEEEE
Confidence 468999999988889999999999999999999999999999999999999999999998742 249999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhc
Q 006275 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (652)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (652)
+|++.+++..||+||+......... ..+ .... ..........++.++++.+
T Consensus 81 ~q~~~l~~~~tv~~~l~~~~~~~~~-----~~~---~~~~---------------------~~~~~~~~~~~~~~~l~~~ 131 (236)
T cd03219 81 FQIPRLFPELTVLENVMVAAQARTG-----SGL---LLAR---------------------ARREEREARERAEELLERV 131 (236)
T ss_pred ecccccccCCCHHHHHHHHHhhccc-----ccc---cccc---------------------ccccHHHHHHHHHHHHHHc
Confidence 9999888888999998532110000 000 0000 0000112234567788899
Q ss_pred CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhc
Q 006275 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLC 323 (652)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~~ 323 (652)
|+. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .|+|||++|||++++..+|
T Consensus 132 ~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~ 210 (236)
T cd03219 132 GLA-DLADRPAGELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLA 210 (236)
T ss_pred Ccc-chhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhC
Confidence 996 567889999999999999999999999999999999999999999999988743 5889999999999999999
Q ss_pred CeEEEEcCCeEEEecCChHHH
Q 006275 324 TKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 324 d~ii~l~~G~~~~~~g~~~~~ 344 (652)
|+|+++++|++. ..|+.+++
T Consensus 211 d~i~~l~~G~i~-~~~~~~~~ 230 (236)
T cd03219 211 DRVTVLDQGRVI-AEGTPDEV 230 (236)
T ss_pred CEEEEEeCCEEE-eecCHHHh
Confidence 999999999984 56765544
No 95
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-42 Score=349.46 Aligned_cols=198 Identities=31% Similarity=0.429 Sum_probs=169.0
Q ss_pred eEEEeEEEEeCC----eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----ceEEEEec
Q 006275 98 VKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----MKIAFLSQ 168 (652)
Q Consensus 98 i~v~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----~~i~~v~Q 168 (652)
|+++|++++|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 478999999987 789999999999999999999999999999999999999999999998743 36999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCC
Q 006275 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (652)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (652)
++.+++..|++||+...... . ........+++.++++.+|+
T Consensus 81 ~~~~~~~~tv~e~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~~l 121 (220)
T cd03293 81 QDALLPWLTVLDNVALGLEL---------------Q------------------------GVPKAEARERAEELLELVGL 121 (220)
T ss_pred ccccccCCCHHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHHHHHcCC
Confidence 99877778999998532100 0 00011123456678888898
Q ss_pred CcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcC
Q 006275 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCT 324 (652)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d 324 (652)
. +..++++.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|++ .++|||++||+++++..+||
T Consensus 122 ~-~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d 200 (220)
T cd03293 122 S-GFENAYPHQLSGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLAD 200 (220)
T ss_pred h-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCC
Confidence 6 567888999999999999999999999999999999999999999999988743 48899999999999999999
Q ss_pred eEEEEc--CCeEE
Q 006275 325 KIVETE--MGVSR 335 (652)
Q Consensus 325 ~ii~l~--~G~~~ 335 (652)
++++|+ +|++.
T Consensus 201 ~i~~l~~~~G~i~ 213 (220)
T cd03293 201 RVVVLSARPGRIV 213 (220)
T ss_pred EEEEEECCCCEEE
Confidence 999999 68873
No 96
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-42 Score=370.36 Aligned_cols=207 Identities=29% Similarity=0.487 Sum_probs=176.2
Q ss_pred ceEEEeEEEEeC----CeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC------------
Q 006275 97 GVKLENISKSYK----GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------ 160 (652)
Q Consensus 97 ~i~v~~ls~~y~----~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------------ 160 (652)
+|+++|++|+|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 1 mi~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 80 (343)
T PRK11153 1 MIELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKA 80 (343)
T ss_pred CEEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 489999999997 3679999999999999999999999999999999999999999999998742
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHH
Q 006275 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (652)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (652)
..|+|++|++.+++..||+||+...... . .........++
T Consensus 81 ~~~ig~v~q~~~l~~~~tv~eni~~~~~~---------------~------------------------~~~~~~~~~~~ 121 (343)
T PRK11153 81 RRQIGMIFQHFNLLSSRTVFDNVALPLEL---------------A------------------------GTPKAEIKARV 121 (343)
T ss_pred hcCEEEEeCCCccCCCCcHHHHHHHHHHH---------------c------------------------CCCHHHHHHHH
Confidence 2599999999887889999998532100 0 00111223456
Q ss_pred HHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecC
Q 006275 240 SKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHD 315 (652)
Q Consensus 240 ~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd 315 (652)
.++++.+|+. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.++..+.++|++ .|+|||++||+
T Consensus 122 ~~~l~~~gL~-~~~~~~~~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~ 200 (343)
T PRK11153 122 TELLELVGLS-DKADRYPAQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHE 200 (343)
T ss_pred HHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 6788899996 567889999999999999999999999999999999999999999999988753 48999999999
Q ss_pred HHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 316 RAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 316 ~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
++++..+||+|++|++|++. +.|+..++
T Consensus 201 ~~~i~~~~d~v~~l~~G~i~-~~g~~~~~ 228 (343)
T PRK11153 201 MDVVKRICDRVAVIDAGRLV-EQGTVSEV 228 (343)
T ss_pred HHHHHHhCCEEEEEECCEEE-EEcCHHHH
Confidence 99999999999999999984 66765554
No 97
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.4e-42 Score=363.47 Aligned_cols=206 Identities=25% Similarity=0.485 Sum_probs=177.7
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------ceEEEEec
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLSQ 168 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------~~i~~v~Q 168 (652)
++++|++++|++..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.+ ..+||++|
T Consensus 3 l~~~~l~~~~~~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig~~~q 82 (301)
T TIGR03522 3 IRVSSLTKLYGTQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIGYLPE 82 (301)
T ss_pred EEEEEEEEEECCEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceEEecC
Confidence 899999999998889999999999999999999999999999999999999999999998743 25999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCC
Q 006275 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (652)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (652)
++.+++..|+.||+..... +. ..+..+..+++.++++.+|+
T Consensus 83 ~~~l~~~~tv~e~l~~~~~---------------~~------------------------~~~~~~~~~~~~~~l~~~gl 123 (301)
T TIGR03522 83 HNPLYLDMYVREYLQFIAG---------------IY------------------------GMKGQLLKQRVEEMIELVGL 123 (301)
T ss_pred CCCCCCCCcHHHHHHHHHH---------------Hc------------------------CCCHHHHHHHHHHHHHHCCC
Confidence 9988888999999752100 00 00111223456678889999
Q ss_pred CcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhcCeE
Q 006275 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLCTKI 326 (652)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~~d~i 326 (652)
. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|++ .++|||++||+++++.++||||
T Consensus 124 ~-~~~~~~~~~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i 202 (301)
T TIGR03522 124 R-PEQHKKIGQLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRV 202 (301)
T ss_pred c-hHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEE
Confidence 6 567899999999999999999999999999999999999999999999988753 3789999999999999999999
Q ss_pred EEEcCCeEEEecCChHHH
Q 006275 327 VETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 327 i~l~~G~~~~~~g~~~~~ 344 (652)
+++++|++. +.|+.+++
T Consensus 203 ~~l~~G~i~-~~g~~~~~ 219 (301)
T TIGR03522 203 IIINKGKIV-ADKKLDEL 219 (301)
T ss_pred EEEECCEEE-EeCCHHHH
Confidence 999999985 67876654
No 98
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-42 Score=344.73 Aligned_cols=198 Identities=28% Similarity=0.515 Sum_probs=170.3
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC------ceEEEEeccCc
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------MKIAFLSQEFE 171 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------~~i~~v~Q~~~ 171 (652)
|+++|+++.|+++++++++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|++.
T Consensus 1 l~~~~l~~~~~~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q~~~ 80 (210)
T cd03269 1 LEVENVTKRFGRVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPEERG 80 (210)
T ss_pred CEEEEEEEEECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEeccCCc
Confidence 478999999988889999999999999999999999999999999999999999999998854 36999999998
Q ss_pred cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcc
Q 006275 172 VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTAD 251 (652)
Q Consensus 172 ~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~ 251 (652)
+++..|++||+..... .. ........+.+.++++.+|+. .
T Consensus 81 ~~~~~tv~e~l~~~~~---------------~~------------------------~~~~~~~~~~~~~~l~~~~l~-~ 120 (210)
T cd03269 81 LYPKMKVIDQLVYLAQ---------------LK------------------------GLKKEEARRRIDEWLERLELS-E 120 (210)
T ss_pred CCcCCcHHHHHHHHHH---------------Hc------------------------CCChHHHHHHHHHHHHHcCCh-H
Confidence 8778899999752100 00 001112234566788888986 5
Q ss_pred cccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcCeEEE
Q 006275 252 DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCTKIVE 328 (652)
Q Consensus 252 ~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~~d~ii~ 328 (652)
..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|++ .++|||++||+++++..+||++++
T Consensus 121 ~~~~~~~~LS~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~ 200 (210)
T cd03269 121 YANKRVEELSKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLL 200 (210)
T ss_pred HHhCcHhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEE
Confidence 67788999999999999999999999999999999999999999999888753 478999999999999999999999
Q ss_pred EcCCeEE
Q 006275 329 TEMGVSR 335 (652)
Q Consensus 329 l~~G~~~ 335 (652)
+++|++.
T Consensus 201 l~~g~i~ 207 (210)
T cd03269 201 LNKGRAV 207 (210)
T ss_pred EeCCEEE
Confidence 9999874
No 99
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-42 Score=350.98 Aligned_cols=203 Identities=31% Similarity=0.411 Sum_probs=174.7
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-------------cc
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------------PN 491 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------------~~ 491 (652)
|+++|+++.|+++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~i~ 80 (235)
T cd03261 1 IELRGLTKSFGGRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRRMG 80 (235)
T ss_pred CeEEEEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcceE
Confidence 47899999999889999999999999999999999999999999999999999999999997652 12
Q ss_pred eecccccccCCCCCCHHHHHHHhhhh---cc----HHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCe
Q 006275 492 YFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (652)
Q Consensus 492 ~~~~~~~~~~~~~~tv~e~~~~~~~~---~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~l 564 (652)
|++|. ..+++..|+.+|+...... .. ...+.++++.+++. +..++++.+|||||||||+|||||+.+|+|
T Consensus 81 ~v~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~ia~al~~~p~l 157 (235)
T cd03261 81 MLFQS--GALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLR-GAEDLYPAELSGGMKKRVALARALALDPEL 157 (235)
T ss_pred EEccC--cccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 44443 3456678999999764221 11 23467889999995 567899999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 565 LVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 565 LlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
|||||||++||+.++..+.+.|++. +.|||+||||++++..+||||++|++|++. +.|+++++...
T Consensus 158 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~~~ 227 (235)
T cd03261 158 LLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIV-AEGTPEELRAS 227 (235)
T ss_pred EEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEE-EecCHHHHcCC
Confidence 9999999999999999999999864 569999999999999999999999999997 46777776543
No 100
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=7.6e-44 Score=336.99 Aligned_cols=213 Identities=30% Similarity=0.435 Sum_probs=183.4
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCc-----------eEE
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM-----------KIA 164 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~-----------~i~ 164 (652)
+.+.++|+.|+|++++++++|||+|++||++||+|||||||||.+.++.|+++|++|+|.+++.+. .||
T Consensus 3 ~~L~a~~l~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlGig 82 (243)
T COG1137 3 STLVAENLAKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLGIG 82 (243)
T ss_pred cEEEehhhhHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcCcc
Confidence 358999999999999999999999999999999999999999999999999999999999997643 599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhh
Q 006275 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (652)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (652)
|+||++.++..+||+||++..+.-.. .+ ....+-+.++.++|+
T Consensus 83 YLpQE~SIFr~LtV~dNi~~vlE~~~-----------------~d--------------------~~~~~~~~~l~~LL~ 125 (243)
T COG1137 83 YLPQEASIFRKLTVEDNIMAVLEIRE-----------------KD--------------------LKKAERKEELDALLE 125 (243)
T ss_pred cccccchHhhcCcHHHHHHHHHhhhh-----------------cc--------------------hhHHHHHHHHHHHHH
Confidence 99999999999999999974431100 00 000112334668899
Q ss_pred hcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHH---HHccCCCeEEEEecCHHHHHh
Q 006275 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEG---YLGKQDVPMVIISHDRAFLDQ 321 (652)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~---~L~~~g~tvIivsHd~~~l~~ 321 (652)
+|++. +..+.+..+||||||+|+.|||||+.+|+++||||||+|+||-+...+.+ .|++.|..|+++.|+..+...
T Consensus 126 ef~i~-hlr~~~a~sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~ 204 (243)
T COG1137 126 EFHIT-HLRDSKAYSLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLD 204 (243)
T ss_pred HhchH-HHhcCcccccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHh
Confidence 99996 68899999999999999999999999999999999999999998776655 567889999999999999999
Q ss_pred hcCeEEEEcCCeEEEecCChHHHHHH
Q 006275 322 LCTKIVETEMGVSRTYEGNYSQYVLE 347 (652)
Q Consensus 322 ~~d~ii~l~~G~~~~~~g~~~~~~~~ 347 (652)
+|||.+++.+|++ .+.|++++.+..
T Consensus 205 i~dRaYIi~~G~v-la~G~p~ei~~n 229 (243)
T COG1137 205 ICDRAYIISDGKV-LAEGSPEEIVNN 229 (243)
T ss_pred hhheEEEEecCeE-EecCCHHHHhcC
Confidence 9999999999998 578998877653
No 101
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.6e-42 Score=348.18 Aligned_cols=199 Identities=30% Similarity=0.477 Sum_probs=170.8
Q ss_pred ceEEEeEEEEeCCe----eeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------ceE
Q 006275 97 GVKLENISKSYKGV----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKI 163 (652)
Q Consensus 97 ~i~v~~ls~~y~~~----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------~~i 163 (652)
+|+++|++++|+++ ++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..+
T Consensus 1 ~l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i 80 (218)
T cd03266 1 MITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRL 80 (218)
T ss_pred CeEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhE
Confidence 37899999999876 79999999999999999999999999999999999999999999998743 259
Q ss_pred EEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHh
Q 006275 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (652)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (652)
+|++|++.+++..||+||+...... . .........++.+++
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l 121 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGL---------------Y------------------------GLKGDELTARLEELA 121 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHHH
Confidence 9999999887778999998521100 0 001112234566788
Q ss_pred hhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHH
Q 006275 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLD 320 (652)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~ 320 (652)
+.+|+. +..++++.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .|+|||+|||+++++.
T Consensus 122 ~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~ 200 (218)
T cd03266 122 DRLGME-ELLDRRVGGFSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVE 200 (218)
T ss_pred HHcCCH-HHHhhhhhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 888986 567888999999999999999999999999999999999999999999888753 4889999999999999
Q ss_pred hhcCeEEEEcCCeEE
Q 006275 321 QLCTKIVETEMGVSR 335 (652)
Q Consensus 321 ~~~d~ii~l~~G~~~ 335 (652)
.+||++++|++|++.
T Consensus 201 ~~~d~i~~l~~G~i~ 215 (218)
T cd03266 201 RLCDRVVVLHRGRVV 215 (218)
T ss_pred HhcCEEEEEECCEEe
Confidence 999999999999874
No 102
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=4.9e-42 Score=353.38 Aligned_cols=211 Identities=24% Similarity=0.415 Sum_probs=178.5
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------------
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------------- 160 (652)
+.|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 4 ~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 83 (257)
T PRK10619 4 NKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVAD 83 (257)
T ss_pred ccEEEeeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccccccccc
Confidence 45999999999998889999999999999999999999999999999999999999999998732
Q ss_pred --------ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCCh
Q 006275 161 --------MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNL 232 (652)
Q Consensus 161 --------~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (652)
.+++|++|++.+++..|++||+...... +. ....
T Consensus 84 ~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~--------------~~------------------------~~~~ 125 (257)
T PRK10619 84 KNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQ--------------VL------------------------GLSK 125 (257)
T ss_pred chHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHH--------------hC------------------------CCCH
Confidence 2599999999887788999998532100 00 0011
Q ss_pred hcHHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeE
Q 006275 233 DTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPM 309 (652)
Q Consensus 233 ~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tv 309 (652)
.....++.++++.+|+.....++++.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|+ +.|+||
T Consensus 126 ~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~ti 205 (257)
T PRK10619 126 QEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTM 205 (257)
T ss_pred HHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEE
Confidence 12244566788899996433478899999999999999999999999999999999999999999998764 358999
Q ss_pred EEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 310 VIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 310 IivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
|+||||++++..+||||+++++|+++ +.|+++++.
T Consensus 206 iivsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 240 (257)
T PRK10619 206 VVVTHEMGFARHVSSHVIFLHQGKIE-EEGAPEQLF 240 (257)
T ss_pred EEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHhh
Confidence 99999999999999999999999985 667776653
No 103
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=3.8e-42 Score=352.71 Aligned_cols=209 Identities=26% Similarity=0.448 Sum_probs=176.3
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------------
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------------- 160 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------------- 160 (652)
+|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK11264 3 AIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIRQ 82 (250)
T ss_pred cEEEeceEEEECCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHHH
Confidence 5899999999988889999999999999999999999999999999999999999999987631
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
..++|++|++.+++..|+.||+...... .. ........++
T Consensus 83 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~--------------~~------------------------~~~~~~~~~~ 124 (250)
T PRK11264 83 LRQHVGFVFQNFNLFPHRTVLENIIEGPVI--------------VK------------------------GEPKEEATAR 124 (250)
T ss_pred hhhhEEEEecCcccCCCCCHHHHHHHHHHH--------------hc------------------------CCCHHHHHHH
Confidence 2599999999887788999998532100 00 0001122345
Q ss_pred HHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecC
Q 006275 239 VSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHD 315 (652)
Q Consensus 239 i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd 315 (652)
+.++++.+|+. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|+ +.|+|||++||+
T Consensus 125 ~~~~l~~~gl~-~~~~~~~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~ 203 (250)
T PRK11264 125 ARELLAKVGLA-GKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHE 203 (250)
T ss_pred HHHHHHHcCCc-chhhCChhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 66778888986 45688899999999999999999999999999999999999999999988774 358899999999
Q ss_pred HHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 316 RAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 316 ~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
++++..+||+|++|++|++. +.|+.+++.
T Consensus 204 ~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 232 (250)
T PRK11264 204 MSFARDVADRAIFMDQGRIV-EQGPAKALF 232 (250)
T ss_pred HHHHHHhcCEEEEEECCEEE-EeCCHHHHh
Confidence 99999999999999999984 667766553
No 104
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.5e-42 Score=347.21 Aligned_cols=204 Identities=28% Similarity=0.434 Sum_probs=172.2
Q ss_pred eEEEeEEEEeCC--eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------ceEEEE
Q 006275 98 VKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFL 166 (652)
Q Consensus 98 i~v~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------~~i~~v 166 (652)
|+++|+++.|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~v 80 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGYC 80 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEEe
Confidence 578999999987 789999999999999999999999999999999999999999999998753 259999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhc
Q 006275 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (652)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (652)
+|++.+++..|+++|+...... . ........+++.++++.+
T Consensus 81 ~q~~~~~~~~tv~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~ 121 (220)
T cd03263 81 PQFDALFDELTVREHLRFYARL---------------K------------------------GLPKSEIKEEVELLLRVL 121 (220)
T ss_pred cCcCCccccCCHHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHHHHHc
Confidence 9998887788999997521100 0 000111234556778888
Q ss_pred CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhcC
Q 006275 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLCT 324 (652)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~~d 324 (652)
|+. +..++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|++ .++|||++||+++++..+||
T Consensus 122 ~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d 200 (220)
T cd03263 122 GLT-DKANKRARTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCD 200 (220)
T ss_pred CCH-HHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcC
Confidence 886 567888999999999999999999999999999999999999999999988753 35899999999999999999
Q ss_pred eEEEEcCCeEEEecCChH
Q 006275 325 KIVETEMGVSRTYEGNYS 342 (652)
Q Consensus 325 ~ii~l~~G~~~~~~g~~~ 342 (652)
+++++++|++. ..|+.+
T Consensus 201 ~i~~l~~g~i~-~~~~~~ 217 (220)
T cd03263 201 RIAIMSDGKLR-CIGSPQ 217 (220)
T ss_pred EEEEEECCEEE-ecCCHH
Confidence 99999999984 556544
No 105
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.7e-42 Score=349.80 Aligned_cols=206 Identities=28% Similarity=0.423 Sum_probs=174.4
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------ceEEEE
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAFL 166 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----------~~i~~v 166 (652)
|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~ 80 (232)
T cd03218 1 LRAENLSKRYGKRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIGYL 80 (232)
T ss_pred CeEEEEEEEeCCEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEEEe
Confidence 478999999998889999999999999999999999999999999999999999999998742 249999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhc
Q 006275 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (652)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (652)
+|++.+++..|++||+....... .........++.++++.+
T Consensus 81 ~q~~~~~~~~tv~~~l~~~~~~~---------------------------------------~~~~~~~~~~~~~~l~~~ 121 (232)
T cd03218 81 PQEASIFRKLTVEENILAVLEIR---------------------------------------GLSKKEREEKLEELLEEF 121 (232)
T ss_pred cCCccccccCcHHHHHHHHHHhc---------------------------------------CCCHHHHHHHHHHHHHHc
Confidence 99998877889999985321000 000011233456778888
Q ss_pred CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhc
Q 006275 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLC 323 (652)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~ 323 (652)
|+. +..++.+.+||||||||++|||||+.+|++|||||||+|||+.+++.+.++|+ +.++|||++|||++++..+|
T Consensus 122 ~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~ 200 (232)
T cd03218 122 HIT-HLRKSKASSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSIT 200 (232)
T ss_pred CCh-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhC
Confidence 986 56788899999999999999999999999999999999999999999988774 35889999999999999999
Q ss_pred CeEEEEcCCeEEEecCChHHH
Q 006275 324 TKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 324 d~ii~l~~G~~~~~~g~~~~~ 344 (652)
|+|++|++|++. ..|+.+++
T Consensus 201 d~i~~l~~G~i~-~~~~~~~~ 220 (232)
T cd03218 201 DRAYIIYEGKVL-AEGTPEEI 220 (232)
T ss_pred CEEEEEECCeEE-EEeCHHHh
Confidence 999999999984 56765554
No 106
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1e-42 Score=346.33 Aligned_cols=192 Identities=31% Similarity=0.540 Sum_probs=165.0
Q ss_pred EEEeEEEEeCC-eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-------ceEEEEeccC
Q 006275 99 KLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------MKIAFLSQEF 170 (652)
Q Consensus 99 ~v~~ls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-------~~i~~v~Q~~ 170 (652)
+++|++++|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..|+|++|++
T Consensus 1 ~~~~l~~~~~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q~~ 80 (205)
T cd03226 1 RIENISFSYKKGTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQDV 80 (205)
T ss_pred CcccEEEEeCCcCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEecCh
Confidence 36899999987 789999999999999999999999999999999999999999999998754 2699999997
Q ss_pred cc-CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCC
Q 006275 171 EV-SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (652)
Q Consensus 171 ~~-~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (652)
.. .+..|++||+...... .. ....++.++++.+|+.
T Consensus 81 ~~~~~~~tv~e~l~~~~~~-----------------------------------------~~--~~~~~~~~~l~~~~l~ 117 (205)
T cd03226 81 DYQLFTDSVREELLLGLKE-----------------------------------------LD--AGNEQAETVLKDLDLY 117 (205)
T ss_pred hhhhhhccHHHHHhhhhhh-----------------------------------------cC--ccHHHHHHHHHHcCCc
Confidence 42 3467999998522100 00 0123456778888986
Q ss_pred cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCeE
Q 006275 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTKI 326 (652)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~d~i 326 (652)
+..++++.+||||||||++|||||+.+|++|||||||+|||+.+++.+.++|+ +.|+|||++||+++++..+||++
T Consensus 118 -~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i 196 (205)
T cd03226 118 -ALKERHPLSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRV 196 (205)
T ss_pred -hhcCCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEE
Confidence 56788999999999999999999999999999999999999999999998875 34889999999999999999999
Q ss_pred EEEcCCeE
Q 006275 327 VETEMGVS 334 (652)
Q Consensus 327 i~l~~G~~ 334 (652)
++|++|++
T Consensus 197 ~~l~~G~i 204 (205)
T cd03226 197 LLLANGAI 204 (205)
T ss_pred EEEECCEE
Confidence 99999975
No 107
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.3e-42 Score=350.27 Aligned_cols=209 Identities=23% Similarity=0.414 Sum_probs=177.0
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC------------ceEE
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------MKIA 164 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------------~~i~ 164 (652)
+|+++|++++|+++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++
T Consensus 1 ~l~~~~l~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 80 (240)
T PRK09493 1 MIEFKNVSKHFGPTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAG 80 (240)
T ss_pred CEEEEeEEEEECCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhceE
Confidence 3789999999988889999999999999999999999999999999999999999999998742 2599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhh
Q 006275 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (652)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (652)
|++|++.+++..||.+|+...... .. .........++.++++
T Consensus 81 ~~~q~~~~~~~~tv~~~l~~~~~~--------------~~------------------------~~~~~~~~~~~~~~l~ 122 (240)
T PRK09493 81 MVFQQFYLFPHLTALENVMFGPLR--------------VR------------------------GASKEEAEKQARELLA 122 (240)
T ss_pred EEecccccCCCCcHHHHHHhHHHH--------------hc------------------------CCCHHHHHHHHHHHHH
Confidence 999999887788999998522100 00 0011122345667888
Q ss_pred hcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHh
Q 006275 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQ 321 (652)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~ 321 (652)
.+|+. +..++.+.+||||||||++|||||+.+|++|||||||++||+.++.++.++|+ +.++|||++||+++++..
T Consensus 123 ~~gl~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~ 201 (240)
T PRK09493 123 KVGLA-ERAHHYPSELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEK 201 (240)
T ss_pred HcCCh-HHHhcChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 89986 56788899999999999999999999999999999999999999999988874 358999999999999999
Q ss_pred hcCeEEEEcCCeEEEecCChHHHH
Q 006275 322 LCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 322 ~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
+||+++++++|++. +.|+++++.
T Consensus 202 ~~d~i~~l~~G~i~-~~g~~~~~~ 224 (240)
T PRK09493 202 VASRLIFIDKGRIA-EDGDPQVLI 224 (240)
T ss_pred hCCEEEEEECCEEE-eeCCHHHHh
Confidence 99999999999984 667766653
No 108
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=4.5e-42 Score=361.78 Aligned_cols=206 Identities=28% Similarity=0.422 Sum_probs=180.2
Q ss_pred CcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------cce
Q 006275 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNY 492 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~~ 492 (652)
..+|+++||+++|+++.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 5 ~~~i~i~~l~k~~~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~ig~ 84 (306)
T PRK13537 5 VAPIDFRNVEKRYGDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRVGV 84 (306)
T ss_pred CceEEEEeEEEEECCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcEEE
Confidence 35799999999999889999999999999999999999999999999999999999999999998752 245
Q ss_pred ecccccccCCCCCCHHHHHHHhhhhc--c----HHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEE
Q 006275 493 FEQNQAEALDLDKTVLETVAEAAEDW--R----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (652)
Q Consensus 493 ~~~~~~~~~~~~~tv~e~~~~~~~~~--~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLl 566 (652)
++|. ..+++.+|+.||+.+..... . ...+.++++.+++. ...++++.+||||||||++|||||+.+|++||
T Consensus 85 v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~la~aL~~~P~lll 161 (306)
T PRK13537 85 VPQF--DNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLE-NKADAKVGELSGGMKRRLTLARALVNDPDVLV 161 (306)
T ss_pred Eecc--CcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-hHhcCchhhCCHHHHHHHHHHHHHhCCCCEEE
Confidence 5554 35667899999998643221 1 23466889999995 56899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 567 LDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 567 LDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
|||||+|||+.++..+.++|+++ +.|||++||+++++..+||||++|++|++. +.|++++..+.
T Consensus 162 LDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~-~~g~~~~l~~~ 228 (306)
T PRK13537 162 LDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKI-AEGAPHALIES 228 (306)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EECCHHHHHhc
Confidence 99999999999999999999875 469999999999999999999999999997 56888876544
No 109
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-42 Score=349.98 Aligned_cols=207 Identities=31% Similarity=0.522 Sum_probs=174.8
Q ss_pred ceEEEeEEEEeCCe----eeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC------------
Q 006275 97 GVKLENISKSYKGV----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------ 160 (652)
Q Consensus 97 ~i~v~~ls~~y~~~----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------------ 160 (652)
+|+++|++++|+++ ++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 1 ~i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (233)
T cd03258 1 MIELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKA 80 (233)
T ss_pred CeEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHH
Confidence 37899999999876 89999999999999999999999999999999999999999999998742
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHH
Q 006275 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (652)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (652)
..++|++|++.+++..|+.||+...+.. . ..........+
T Consensus 81 ~~~i~~~~q~~~~~~~~t~~e~l~~~~~~---------------~------------------------~~~~~~~~~~~ 121 (233)
T cd03258 81 RRRIGMIFQHFNLLSSRTVFENVALPLEI---------------A------------------------GVPKAEIEERV 121 (233)
T ss_pred HhheEEEccCcccCCCCcHHHHHHHHHHH---------------c------------------------CCCHHHHHHHH
Confidence 2599999999887788999998532100 0 00011123345
Q ss_pred HHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecC
Q 006275 240 SKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHD 315 (652)
Q Consensus 240 ~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd 315 (652)
.++++.+|+. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.++..+.++|++ .|+|||++||+
T Consensus 122 ~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~ 200 (233)
T cd03258 122 LELLELVGLE-DKADAYPAQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHE 200 (233)
T ss_pred HHHHHHCCCh-hhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 6778888986 567888999999999999999999999999999999999999999999888743 38899999999
Q ss_pred HHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 316 RAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 316 ~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
++++..+||++++|++|++. ..|+.+++
T Consensus 201 ~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 228 (233)
T cd03258 201 MEVVKRICDRVAVMEKGEVV-EEGTVEEV 228 (233)
T ss_pred HHHHHHhCCEEEEEECCEEE-EecCHHHH
Confidence 99999999999999999984 55665543
No 110
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-42 Score=344.17 Aligned_cols=197 Identities=29% Similarity=0.458 Sum_probs=168.8
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------ceEEEEec
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLSQ 168 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------~~i~~v~Q 168 (652)
|+++|++++|+++++++|+||+|++| +++|+||||||||||+++|+|+++|++|+|.++|.. ..++|++|
T Consensus 1 i~~~~~~~~~~~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 79 (211)
T cd03264 1 LQLENLTKRYGKKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGYLPQ 79 (211)
T ss_pred CEEEEEEEEECCEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEEecC
Confidence 57899999998888999999999999 999999999999999999999999999999998753 35999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCC
Q 006275 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (652)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (652)
++.+++..|+.||+...... . ..+.....+.+.++++.+|+
T Consensus 80 ~~~~~~~~tv~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~~l 120 (211)
T cd03264 80 EFGVYPNFTVREFLDYIAWL---------------K------------------------GIPSKEVKARVDEVLELVNL 120 (211)
T ss_pred CCcccccCCHHHHHHHHHHH---------------h------------------------CCCHHHHHHHHHHHHHHCCC
Confidence 99887778999998521100 0 00011123456677888888
Q ss_pred CcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhcCeE
Q 006275 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLCTKI 326 (652)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~~d~i 326 (652)
. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|++ .+.|||+||||++++.++|||+
T Consensus 121 ~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i 199 (211)
T cd03264 121 G-DRAKKKIGSLSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQV 199 (211)
T ss_pred H-HHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEE
Confidence 6 566888999999999999999999999999999999999999999999988853 2689999999999999999999
Q ss_pred EEEcCCeEE
Q 006275 327 VETEMGVSR 335 (652)
Q Consensus 327 i~l~~G~~~ 335 (652)
+++++|++.
T Consensus 200 ~~l~~g~i~ 208 (211)
T cd03264 200 AVLNKGKLV 208 (211)
T ss_pred EEEECCEEE
Confidence 999999874
No 111
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-42 Score=360.47 Aligned_cols=208 Identities=22% Similarity=0.324 Sum_probs=174.7
Q ss_pred eEEEeEEEEeCC-----eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC------------
Q 006275 98 VKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------ 160 (652)
Q Consensus 98 i~v~~ls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------------ 160 (652)
|+++|++++|++ .++|+||||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 899999999974 469999999999999999999999999999999999999999999998752
Q ss_pred --ceEEEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHH
Q 006275 161 --MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (652)
Q Consensus 161 --~~i~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (652)
..||||+|+|. ..+..||+||+...... . ..+.....+
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~-----------------~----------------------~~~~~~~~~ 123 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMN-----------------F----------------------GVSEEDAKQ 123 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHH-----------------c----------------------CCCHHHHHH
Confidence 25999999973 22457999998522100 0 011112334
Q ss_pred HHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEe
Q 006275 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIIS 313 (652)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivs 313 (652)
++.++++.+|+.....++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .|.|||++|
T Consensus 124 ~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiit 203 (290)
T PRK13634 124 KAREMIELVGLPEELLARSPFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVT 203 (290)
T ss_pred HHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 5678889999965567899999999999999999999999999999999999999999999887743 489999999
Q ss_pred cCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
||++++..+||||++|++|++ .+.|+..++.
T Consensus 204 Hd~~~~~~~~drv~~l~~G~i-~~~g~~~~~~ 234 (290)
T PRK13634 204 HSMEDAARYADQIVVMHKGTV-FLQGTPREIF 234 (290)
T ss_pred CCHHHHHHhCCEEEEEECCEE-EEECCHHHHh
Confidence 999999999999999999998 4678766654
No 112
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-42 Score=361.37 Aligned_cols=210 Identities=22% Similarity=0.342 Sum_probs=175.4
Q ss_pred ceEEEeEEEEeCCe-----eeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------
Q 006275 97 GVKLENISKSYKGV-----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (652)
Q Consensus 97 ~i~v~~ls~~y~~~-----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------- 160 (652)
.|+++|++++|++. ++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 38999999999753 59999999999999999999999999999999999999999999986421
Q ss_pred -----------------------ceEEEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhh
Q 006275 161 -----------------------MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRL 216 (652)
Q Consensus 161 -----------------------~~i~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (652)
..|||++|+|. .++..||+||+...... .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~-----------------~---------- 134 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVS-----------------M---------- 134 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHH-----------------c----------
Confidence 24899999873 33457999998522100 0
Q ss_pred HHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHH
Q 006275 217 LDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIE 296 (652)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~ 296 (652)
..+..+..+++.++++.+|+..+..++++.+|||||||||+|||||+.+|++|||||||++||+.++.
T Consensus 135 ------------~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~ 202 (305)
T PRK13651 135 ------------GVSKEEAKKRAAKYIELVGLDESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVK 202 (305)
T ss_pred ------------CCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHH
Confidence 01112334567788999999656789999999999999999999999999999999999999999999
Q ss_pred HHHHHHc---cCCCeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHHH
Q 006275 297 WLEGYLG---KQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVL 346 (652)
Q Consensus 297 ~l~~~L~---~~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~~ 346 (652)
.+.++|+ +.|+|||+||||++++.++||||++|++|++ .+.|+..++..
T Consensus 203 ~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~vl~~G~i-~~~g~~~~~~~ 254 (305)
T PRK13651 203 EILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTIFFKDGKI-IKDGDTYDILS 254 (305)
T ss_pred HHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEEEEECCEE-EEECCHHHHhc
Confidence 9988774 4589999999999999999999999999997 46777666543
No 113
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-42 Score=354.12 Aligned_cols=198 Identities=24% Similarity=0.401 Sum_probs=171.6
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----ceEEEEeccC
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----MKIAFLSQEF 170 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----~~i~~v~Q~~ 170 (652)
+.|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|++|++
T Consensus 11 ~~l~i~~l~~~~~~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v~q~~ 90 (257)
T PRK11247 11 TPLLLNAVSKRYGERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLMFQDA 90 (257)
T ss_pred CcEEEEEEEEEECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEEecCc
Confidence 45999999999998889999999999999999999999999999999999999999999987643 3699999999
Q ss_pred ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCc
Q 006275 171 EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTA 250 (652)
Q Consensus 171 ~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~ 250 (652)
.+++..||+||+...+.. ....++.++++.+|+.
T Consensus 91 ~l~~~~tv~enl~~~~~~---------------------------------------------~~~~~~~~~l~~~gl~- 124 (257)
T PRK11247 91 RLLPWKKVIDNVGLGLKG---------------------------------------------QWRDAALQALAAVGLA- 124 (257)
T ss_pred cCCCCCcHHHHHHhcccc---------------------------------------------hHHHHHHHHHHHcCCh-
Confidence 887778999998532100 0112345677888886
Q ss_pred ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhcCeE
Q 006275 251 DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLCTKI 326 (652)
Q Consensus 251 ~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~l~~~~d~i 326 (652)
+..++++.+|||||||||+|||||+.+|++|||||||+|||+.++..+.++|+ +.++|||+||||++++..+||+|
T Consensus 125 ~~~~~~~~~LSgGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i 204 (257)
T PRK11247 125 DRANEWPAALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRV 204 (257)
T ss_pred hHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEE
Confidence 56788899999999999999999999999999999999999999999988774 34899999999999999999999
Q ss_pred EEEcCCeEEEecCC
Q 006275 327 VETEMGVSRTYEGN 340 (652)
Q Consensus 327 i~l~~G~~~~~~g~ 340 (652)
+++++|++. ..++
T Consensus 205 ~~l~~G~i~-~~~~ 217 (257)
T PRK11247 205 LLIEEGKIG-LDLT 217 (257)
T ss_pred EEEECCEEE-eecc
Confidence 999999984 4454
No 114
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-43 Score=334.30 Aligned_cols=207 Identities=28% Similarity=0.410 Sum_probs=174.6
Q ss_pred CcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCe-----eEEEECceecc-------
Q 006275 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRG-----GEVLLGEHNVL------- 489 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~-----G~i~~~g~~~~------- 489 (652)
.+.++++|+++.|+++.+|++||++|++++++||+||+|||||||||++.++.+... |+|.++|+++.
T Consensus 5 ~~~~~~~~l~~yYg~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~ 84 (253)
T COG1117 5 IPAIEVRDLNLYYGDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVV 84 (253)
T ss_pred cceeEecceeEEECchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHH
Confidence 345899999999999999999999999999999999999999999999999987765 99999999873
Q ss_pred -----cceecccccccCCCCCCHHHHHHHhhhhcc------HHHHHHHHhhCCCC---hhhhccCcCCCCHHHHHHHHHH
Q 006275 490 -----PNYFEQNQAEALDLDKTVLETVAEAAEDWR------IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFC 555 (652)
Q Consensus 490 -----~~~~~~~~~~~~~~~~tv~e~~~~~~~~~~------~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqrqrv~LA 555 (652)
.+.++|.+ +. +.+|++||++++..... .+.+...|.+..+. .+.+++.+..||||||||+|||
T Consensus 85 ~lRr~vGMVFQkP--nP-Fp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~~sa~~LSGGQQQRLcIA 161 (253)
T COG1117 85 ELRRRVGMVFQKP--NP-FPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDRLHKSALGLSGGQQQRLCIA 161 (253)
T ss_pred HHHHHheeeccCC--CC-CCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHHhhCCccCCChhHHHHHHHH
Confidence 23445543 33 45999999999864322 12245556655553 2456788899999999999999
Q ss_pred HHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhcCc--eEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhhc
Q 006275 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYKG--TVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTSF 632 (652)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~--tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~~ 632 (652)
|||+.+|+|||||||||+|||-+...+.++|.++.. |||+|||.+.-+.+++|++.++..|+++++ |+.++++...
T Consensus 162 RalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~-g~T~~iF~~P 239 (253)
T COG1117 162 RALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEF-GPTDKIFTNP 239 (253)
T ss_pred HHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEE-cCHHhhhcCc
Confidence 999999999999999999999999999999998853 999999999999999999999999999986 7777665443
No 115
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=4.4e-42 Score=346.03 Aligned_cols=198 Identities=26% Similarity=0.456 Sum_probs=169.1
Q ss_pred eEEEeEEEEe-CCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-------------ceE
Q 006275 98 VKLENISKSY-KGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------MKI 163 (652)
Q Consensus 98 i~v~~ls~~y-~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-------------~~i 163 (652)
|+++|++++| +++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..+
T Consensus 2 l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i 81 (222)
T PRK10908 2 IRFEHVSKAYLGGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQI 81 (222)
T ss_pred EEEEeeEEEecCCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhhe
Confidence 7899999999 66789999999999999999999999999999999999999999999998742 259
Q ss_pred EEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHh
Q 006275 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (652)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (652)
+|++|++.+++..|+.||+...... . .....+...++.+++
T Consensus 82 ~~~~q~~~~~~~~tv~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l 122 (222)
T PRK10908 82 GMIFQDHHLLMDRTVYDNVAIPLII---------------A------------------------GASGDDIRRRVSAAL 122 (222)
T ss_pred EEEecCccccccccHHHHHHhHHHh---------------c------------------------CCCHHHHHHHHHHHH
Confidence 9999999877889999998532100 0 001112233456778
Q ss_pred hhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHH
Q 006275 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLD 320 (652)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~ 320 (652)
+.+|+. +..++++.+||||||||++|||||+.+|++|||||||++||+.+++.+.++|+ +.+.|||++|||++++.
T Consensus 123 ~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~ 201 (222)
T PRK10908 123 DKVGLL-DKAKNFPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLIS 201 (222)
T ss_pred HHcCCh-hhhhCCchhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 888886 56788899999999999999999999999999999999999999999988764 34789999999999999
Q ss_pred hhcCeEEEEcCCeEE
Q 006275 321 QLCTKIVETEMGVSR 335 (652)
Q Consensus 321 ~~~d~ii~l~~G~~~ 335 (652)
.+||+|++|++|++.
T Consensus 202 ~~~d~i~~l~~G~i~ 216 (222)
T PRK10908 202 RRSYRMLTLSDGHLH 216 (222)
T ss_pred HhCCEEEEEECCEEc
Confidence 999999999999874
No 116
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3e-42 Score=345.78 Aligned_cols=192 Identities=27% Similarity=0.425 Sum_probs=167.2
Q ss_pred EEEEEeeeeEeCC--eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc------------
Q 006275 424 VVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------ 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~--~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------ 489 (652)
+|+++|++++|++ +++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 ~l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 1 MIRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred CeEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 4789999999964 47999999999999999999999999999999999999999999999997652
Q ss_pred -cceecccccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCC
Q 006275 490 -PNYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPS 562 (652)
Q Consensus 490 -~~~~~~~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p 562 (652)
.+|++|+ ..+++..|+.+|+...... ....++.++++.+++. +..++++.+|||||||||+|||||+.+|
T Consensus 81 ~i~~~~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~laral~~~p 157 (216)
T TIGR00960 81 HIGMVFQD--HRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLE-GKAHALPMQLSGGEQQRVAIARAIVHKP 157 (216)
T ss_pred hceEEecC--ccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 1344443 3456678999999764221 1234578899999995 5678999999999999999999999999
Q ss_pred CeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEE
Q 006275 563 TLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (652)
Q Consensus 563 ~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i 618 (652)
++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|++
T Consensus 158 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 158 PLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999875 46999999999999999999999999874
No 117
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.9e-42 Score=365.82 Aligned_cols=203 Identities=26% Similarity=0.377 Sum_probs=176.4
Q ss_pred EEEEEeeeeEeCC----eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------
Q 006275 424 VVTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~----~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------- 489 (652)
||+++||+++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 mI~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~ 80 (343)
T TIGR02314 1 MIKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKA 80 (343)
T ss_pred CEEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 4899999999952 47999999999999999999999999999999999999999999999998762
Q ss_pred ---cceecccccccCCCCCCHHHHHHHhhhh--c----cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHcc
Q 006275 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (652)
Q Consensus 490 ---~~~~~~~~~~~~~~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~ 560 (652)
.++++|+ ..+++..|+.+|+.+.... + ...++.++++.+|+. +..++++.+|||||||||+|||||+.
T Consensus 81 r~~Ig~v~Q~--~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~-~~~~~~~~~LSgGqkQRV~IARAL~~ 157 (343)
T TIGR02314 81 RRQIGMIFQH--FNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLG-DKHDSYPSNLSGGQKQRVAIARALAS 157 (343)
T ss_pred hcCEEEEECC--ccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHHHh
Confidence 1344443 3566789999999875421 1 123577899999995 67899999999999999999999999
Q ss_pred CCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 561 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
+|++|||||||++||+.++..+.++|++. +.|||+||||++.+.++||+|++|++|++++ .|++++++.
T Consensus 158 ~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~-~g~~~~v~~ 230 (343)
T TIGR02314 158 NPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIE-QGTVSEIFS 230 (343)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHHc
Confidence 99999999999999999999999998764 5699999999999999999999999999984 577776654
No 118
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-42 Score=353.54 Aligned_cols=199 Identities=24% Similarity=0.324 Sum_probs=170.2
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----ceEEEEeccCc
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----MKIAFLSQEFE 171 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----~~i~~v~Q~~~ 171 (652)
+|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|++.
T Consensus 1 ml~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~~~ 80 (255)
T PRK11248 1 MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGPGAERGVVFQNEG 80 (255)
T ss_pred CEEEEEEEEEeCCeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCCcEEEEeCCCc
Confidence 3789999999988889999999999999999999999999999999999999999999998743 25899999998
Q ss_pred cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcc
Q 006275 172 VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTAD 251 (652)
Q Consensus 172 ~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~ 251 (652)
+++..||.+|+...... . .........++.++++.+|+. +
T Consensus 81 ~~~~~tv~e~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~gl~-~ 120 (255)
T PRK11248 81 LLPWRNVQDNVAFGLQL---------------A------------------------GVEKMQRLEIAHQMLKKVGLE-G 120 (255)
T ss_pred cCCCCcHHHHHHhHHHH---------------c------------------------CCCHHHHHHHHHHHHHHcCCh-h
Confidence 87778999998532100 0 001111234567788899986 5
Q ss_pred cccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCeEE
Q 006275 252 DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTKIV 327 (652)
Q Consensus 252 ~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~ii 327 (652)
..++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .|+|||+||||++++..+||+|+
T Consensus 121 ~~~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~ 200 (255)
T PRK11248 121 AEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELV 200 (255)
T ss_pred HhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEE
Confidence 67888999999999999999999999999999999999999999999988753 48999999999999999999999
Q ss_pred EEc--CCeEE
Q 006275 328 ETE--MGVSR 335 (652)
Q Consensus 328 ~l~--~G~~~ 335 (652)
+|+ +|++.
T Consensus 201 ~l~~~~G~i~ 210 (255)
T PRK11248 201 LLSPGPGRVV 210 (255)
T ss_pred EEeCCCcEEE
Confidence 998 47763
No 119
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.7e-43 Score=341.73 Aligned_cols=222 Identities=29% Similarity=0.401 Sum_probs=187.5
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCc-----------eEE
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM-----------KIA 164 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~-----------~i~ 164 (652)
+.+++++++++||+-.+++||||+|++||+++||||||||||||+++|+|+++|++|+|.+.|.++ .|+
T Consensus 3 ~lL~v~~l~k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi~ 82 (250)
T COG0411 3 PLLEVRGLSKRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGIA 82 (250)
T ss_pred ceeeeccceeecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccce
Confidence 458899999999999999999999999999999999999999999999999999999999998643 589
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhh
Q 006275 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (652)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (652)
.-+|.+.+++++||.||++.+...... +...+.... ..-...+..+++.++|+
T Consensus 83 RTFQ~~rlF~~lTVlENv~va~~~~~~-------~~~~l~~~~--------------------~~~~e~~~~e~A~~~Le 135 (250)
T COG0411 83 RTFQITRLFPGLTVLENVAVGAHARLG-------LSGLLGRPR--------------------ARKEEREARERARELLE 135 (250)
T ss_pred eecccccccCCCcHHHHHHHHhhhhhh-------hhhhhcccc--------------------chhhHHHHHHHHHHHHH
Confidence 999999999999999999754321100 111110000 00012345667888999
Q ss_pred hcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---c-CCCeEEEEecCHHHHH
Q 006275 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---K-QDVPMVIISHDRAFLD 320 (652)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~-~g~tvIivsHd~~~l~ 320 (652)
.+|+. +..+++..+||+|||+|+.|||||+.+|++||||||.+||.+.....+.++++ + .|.||++|.||+..+.
T Consensus 136 ~vgL~-~~a~~~A~~LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm 214 (250)
T COG0411 136 FVGLG-ELADRPAGNLSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVM 214 (250)
T ss_pred HcCCc-hhhcchhhcCChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHh
Confidence 99997 68899999999999999999999999999999999999999999998887764 3 5799999999999999
Q ss_pred hhcCeEEEEcCCeEEEecCChHHHHH
Q 006275 321 QLCTKIVETEMGVSRTYEGNYSQYVL 346 (652)
Q Consensus 321 ~~~d~ii~l~~G~~~~~~g~~~~~~~ 346 (652)
.+||||+||+.|++ ..+|++++...
T Consensus 215 ~l~dri~Vl~~G~~-IAeG~P~eV~~ 239 (250)
T COG0411 215 GLADRIVVLNYGEV-IAEGTPEEVRN 239 (250)
T ss_pred hhccEEEeccCCcC-cccCCHHHHhc
Confidence 99999999999998 58899887654
No 120
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.5e-42 Score=343.27 Aligned_cols=194 Identities=32% Similarity=0.477 Sum_probs=168.7
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCc--------eEEEEecc
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM--------KIAFLSQE 169 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~--------~i~~v~Q~ 169 (652)
|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+. .++|++|+
T Consensus 1 l~~~~l~~~~~~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~ 80 (208)
T cd03268 1 LKTNDLTKTYGKKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGALIEA 80 (208)
T ss_pred CEEEEEEEEECCeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEecCC
Confidence 4789999999888899999999999999999999999999999999999999999999988542 59999999
Q ss_pred CccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCC
Q 006275 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (652)
Q Consensus 170 ~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (652)
+.+++..|++||+...... .. .-..++.++++.+|+.
T Consensus 81 ~~~~~~~tv~e~l~~~~~~-----------------------------------------~~--~~~~~~~~~l~~~~l~ 117 (208)
T cd03268 81 PGFYPNLTARENLRLLARL-----------------------------------------LG--IRKKRIDEVLDVVGLK 117 (208)
T ss_pred CccCccCcHHHHHHHHHHh-----------------------------------------cC--CcHHHHHHHHHHcCCH
Confidence 9887889999998532100 00 0023455677888885
Q ss_pred cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcCeE
Q 006275 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCTKI 326 (652)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~~d~i 326 (652)
+..++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|++ .++|||++|||++++..+||++
T Consensus 118 -~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v 196 (208)
T cd03268 118 -DSAKKKVKGFSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRI 196 (208)
T ss_pred -HHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEE
Confidence 567888999999999999999999999999999999999999999999888753 5899999999999999999999
Q ss_pred EEEcCCeEE
Q 006275 327 VETEMGVSR 335 (652)
Q Consensus 327 i~l~~G~~~ 335 (652)
+++++|++.
T Consensus 197 ~~l~~g~i~ 205 (208)
T cd03268 197 GIINKGKLI 205 (208)
T ss_pred EEEECCEEE
Confidence 999999874
No 121
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.5e-43 Score=331.56 Aligned_cols=205 Identities=27% Similarity=0.404 Sum_probs=177.5
Q ss_pred EEEEEeeeeEeCCee-eeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--cceecc-----
Q 006275 424 VVTIKNLEFGYEDRL-LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--PNYFEQ----- 495 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~-vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--~~~~~~----- 495 (652)
||++.+++++|++.. +++||||+++.||++||+|+|||||||+||+|++++.|++|.|+++|.+.. |..+.+
T Consensus 1 Ml~v~~l~K~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~IGVl 80 (245)
T COG4555 1 MLEVTDLTKSYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKIGVL 80 (245)
T ss_pred CeeeeehhhhccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhccee
Confidence 589999999999865 899999999999999999999999999999999999999999999998752 111111
Q ss_pred cccccCCCCCCHHHHHHHhhhhcc------HHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeC
Q 006275 496 NQAEALDLDKTVLETVAEAAEDWR------IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (652)
Q Consensus 496 ~~~~~~~~~~tv~e~~~~~~~~~~------~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDE 569 (652)
+-+..++..+|+.||+.+...... ..++.++.+++++ .+..++++.+||-||||||+|||||+++|++++|||
T Consensus 81 ~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l-~~~~~rRv~~~S~G~kqkV~iARAlvh~P~i~vlDE 159 (245)
T COG4555 81 FGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQL-LEYLDRRVGEFSTGMKQKVAIARALVHDPSILVLDE 159 (245)
T ss_pred cCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhCh-HHHHHHHHhhhchhhHHHHHHHHHHhcCCCeEEEcC
Confidence 123456778999999998754322 3457788889998 578999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 570 PTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 570 Pt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||||||+.+++.+.+.|.+. +.+||++||++++++.+||||++|++|+++ +.|+.+....
T Consensus 160 P~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv-~~gs~~~l~~ 222 (245)
T COG4555 160 PTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVV-LEGSIEALDA 222 (245)
T ss_pred CCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEE-EcCCHHHHHH
Confidence 99999999999999999865 459999999999999999999999999998 5688776543
No 122
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=4e-42 Score=372.14 Aligned_cols=213 Identities=30% Similarity=0.402 Sum_probs=180.2
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEEE
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~~ 165 (652)
++|+++|++++|+++++|+++||+|++||+++|+||||||||||||+|+|+++|++|+|.++|.+ .+|||
T Consensus 2 ~~L~~~nls~~y~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig~ 81 (402)
T PRK09536 2 PMIDVSDLSVEFGDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVAS 81 (402)
T ss_pred ceEEEeeEEEEECCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceEE
Confidence 36999999999999999999999999999999999999999999999999999999999998742 25999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh
Q 006275 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (652)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (652)
++|++.+++.+|++||+........ ..+. .......+++.++++.
T Consensus 82 v~q~~~l~~~~tv~e~v~~~~~~~~----------~~~~-------------------------~~~~~~~~~v~~~le~ 126 (402)
T PRK09536 82 VPQDTSLSFEFDVRQVVEMGRTPHR----------SRFD-------------------------TWTETDRAAVERAMER 126 (402)
T ss_pred EccCCCCCCCCCHHHHHHhccchhc----------cccc-------------------------CCCHHHHHHHHHHHHH
Confidence 9999988889999999863211000 0000 0001123456788899
Q ss_pred cCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhh
Q 006275 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQL 322 (652)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~ 322 (652)
+|+. +..++++.+|||||||||+|||||+++|++|||||||+|||+.++..+.++|+ +.++|||++|||++++.++
T Consensus 127 vgl~-~~~~~~~~~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~ 205 (402)
T PRK09536 127 TGVA-QFADRPVTSLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARY 205 (402)
T ss_pred cCCc-hhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHh
Confidence 9996 67899999999999999999999999999999999999999999999888764 3588999999999999999
Q ss_pred cCeEEEEcCCeEEEecCChHHHH
Q 006275 323 CTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 323 ~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
|||+++|++|++. ..|++++++
T Consensus 206 adrii~l~~G~iv-~~G~~~ev~ 227 (402)
T PRK09536 206 CDELVLLADGRVR-AAGPPADVL 227 (402)
T ss_pred CCEEEEEECCEEE-EecCHHHHh
Confidence 9999999999984 678776654
No 123
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-42 Score=357.74 Aligned_cols=209 Identities=23% Similarity=0.416 Sum_probs=175.2
Q ss_pred ceEEEeEEEEeCC-----eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------
Q 006275 97 GVKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (652)
Q Consensus 97 ~i~v~~ls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------- 160 (652)
.|+++|+++.|++ +++|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 3899999999974 369999999999999999999999999999999999999999999998732
Q ss_pred -ceEEEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 161 -MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 161 -~~i~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
..|||++|+|. ..+..||++|+...... ..+...+...+
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~---------------------------------------~~~~~~~~~~~ 122 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPIN---------------------------------------LGLSEEEIENR 122 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHH---------------------------------------CCCCHHHHHHH
Confidence 25999999974 23467999998521100 00112233456
Q ss_pred HHHHhhhcCCCc-ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEe
Q 006275 239 VSKLMPELGFTA-DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIIS 313 (652)
Q Consensus 239 i~~ll~~lgl~~-~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivs 313 (652)
+.++++.+|+.. ...++++.+||||||||++|||||+.+|++|||||||+|||+.++.++.++|++ .|.|||+||
T Consensus 123 ~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vt 202 (287)
T PRK13637 123 VKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVS 202 (287)
T ss_pred HHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 778899999962 467899999999999999999999999999999999999999999999888742 489999999
Q ss_pred cCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
||++++..+||||+++++|++. +.|+..++.
T Consensus 203 Hd~~~~~~~~drv~~l~~G~i~-~~g~~~~~~ 233 (287)
T PRK13637 203 HSMEDVAKLADRIIVMNKGKCE-LQGTPREVF 233 (287)
T ss_pred CCHHHHHHhCCEEEEEECCEEE-EECCHHHHH
Confidence 9999999999999999999984 678766654
No 124
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=3.9e-42 Score=344.30 Aligned_cols=196 Identities=28% Similarity=0.450 Sum_probs=167.0
Q ss_pred eEEEeEEEEeCC-eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-------------ceE
Q 006275 98 VKLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------MKI 163 (652)
Q Consensus 98 i~v~~ls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-------------~~i 163 (652)
|+++|+++.|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..+
T Consensus 1 l~~~~l~~~~~~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i 80 (214)
T cd03292 1 IEFINVTKTYPNGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRKI 80 (214)
T ss_pred CEEEEEEEEeCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHhe
Confidence 478999999965 579999999999999999999999999999999999999999999998742 259
Q ss_pred EEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHh
Q 006275 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (652)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (652)
+|++|++.+++..|++||+...... . ........+++.+++
T Consensus 81 ~~v~q~~~~~~~~t~~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l 121 (214)
T cd03292 81 GVVFQDFRLLPDRNVYENVAFALEV---------------T------------------------GVPPREIRKRVPAAL 121 (214)
T ss_pred EEEecCchhccCCcHHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHHH
Confidence 9999999887788999998532100 0 000112234566778
Q ss_pred hhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHH
Q 006275 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLD 320 (652)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~ 320 (652)
+.+|+. +..++++.+||||||||++|||||+.+|++|||||||+|||+.+++.+.++|+ +.++|||+|||+++++.
T Consensus 122 ~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~ 200 (214)
T cd03292 122 ELVGLS-HKHRALPAELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVD 200 (214)
T ss_pred HHcCCH-HHhhCChhhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 888886 56788899999999999999999999999999999999999999999988774 35899999999999999
Q ss_pred hhcCeEEEEcCCe
Q 006275 321 QLCTKIVETEMGV 333 (652)
Q Consensus 321 ~~~d~ii~l~~G~ 333 (652)
.+||++++|++|+
T Consensus 201 ~~~d~i~~l~~G~ 213 (214)
T cd03292 201 TTRHRVIALERGK 213 (214)
T ss_pred HhCCEEEEEeCCc
Confidence 9999999999886
No 125
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.7e-42 Score=358.70 Aligned_cols=206 Identities=31% Similarity=0.454 Sum_probs=181.7
Q ss_pred EEEEEeeeeEeC-CeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------ccee
Q 006275 424 VVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYF 493 (652)
Q Consensus 424 ~i~~~~v~~~y~-~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~~~ 493 (652)
.++++||++.|+ ++.+|+||||+|++|+++||+||||||||||+|+|+|+++|++|+|.++|.+.. .+|+
T Consensus 4 ~i~~~~l~k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~igy~ 83 (293)
T COG1131 4 VIEVRNLTKKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRIGYV 83 (293)
T ss_pred eeeecceEEEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhheEEE
Confidence 478999999999 699999999999999999999999999999999999999999999999997653 2566
Q ss_pred cccccccCCCCCCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEE
Q 006275 494 EQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (652)
Q Consensus 494 ~~~~~~~~~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlL 567 (652)
+|.. .+++.+|+.|++.+....+ ..+.+.++++.+++.. ..++++.+||+||||||.||+||+.+|+||||
T Consensus 84 ~~~~--~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~-~~~~~~~~lS~G~kqrl~ia~aL~~~P~lliL 160 (293)
T COG1131 84 PQEP--SLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLED-KANKKVRTLSGGMKQRLSIALALLHDPELLIL 160 (293)
T ss_pred ccCC--CCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCch-hhCcchhhcCHHHHHHHHHHHHHhcCCCEEEE
Confidence 6553 4788999999999875433 2356889999999965 45888999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc---C-ceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhhcC
Q 006275 568 DEPTNHLDIPSKEMLEEAISEY---K-GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTSFS 633 (652)
Q Consensus 568 DEPt~~LD~~~~~~l~~~l~~~---~-~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~~~ 633 (652)
||||+|||+.++..+.++|+++ + .||+++||.+++++.+||||++|++|+++ +.|..++......
T Consensus 161 DEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~-~~g~~~~l~~~~~ 229 (293)
T COG1131 161 DEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKII-AEGTPEELKEKFG 229 (293)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEE-EeCCHHHHHHhhc
Confidence 9999999999999999999865 3 49999999999999999999999999998 4577777554433
No 126
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=3.1e-42 Score=351.79 Aligned_cols=215 Identities=27% Similarity=0.429 Sum_probs=175.9
Q ss_pred ceEEEeEEEEeC-CeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-------------ce
Q 006275 97 GVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------MK 162 (652)
Q Consensus 97 ~i~v~~ls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-------------~~ 162 (652)
+|+++|++++|+ ++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..
T Consensus 1 ~l~~~~l~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 1 MLEVENLSKVYPNGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred CeEEEeeeeecCCCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 378999999998 7789999999999999999999999999999999999999999999998742 24
Q ss_pred EEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHH
Q 006275 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (652)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (652)
++|++|++.+++..||++|+.......... .. .+ . ........+++.++
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~------~~-~~-------------~-----------~~~~~~~~~~~~~~ 129 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPT------WR-SL-------------L-----------GRFSEEDKERALSA 129 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccc------hh-hh-------------h-----------ccccHHHHHHHHHH
Confidence 999999998877889999985321100000 00 00 0 00001123456678
Q ss_pred hhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHH
Q 006275 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAF 318 (652)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~ 318 (652)
++.+|+. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|++ .|+|||+|||++++
T Consensus 130 l~~~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~ 208 (243)
T TIGR02315 130 LERVGLA-DKAYQRADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDL 208 (243)
T ss_pred HHHcCcH-hhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 8888986 567888999999999999999999999999999999999999999999888743 37899999999999
Q ss_pred HHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 319 LDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 319 l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
+.++||++++|++|++. +.|+.+++
T Consensus 209 ~~~~~d~v~~l~~G~i~-~~~~~~~~ 233 (243)
T TIGR02315 209 AKKYADRIVGLKAGEIV-FDGAPSEL 233 (243)
T ss_pred HHHhcCeEEEEECCEEE-ecCCHHHh
Confidence 99999999999999984 66776553
No 127
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=4.3e-42 Score=343.71 Aligned_cols=197 Identities=29% Similarity=0.494 Sum_probs=168.1
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC------------ceEEE
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------MKIAF 165 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------------~~i~~ 165 (652)
|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|
T Consensus 1 l~~~~l~~~~~~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~ 80 (213)
T cd03262 1 IEIKNLHKSFGDFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKVGM 80 (213)
T ss_pred CEEEEEEEEECCeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcceE
Confidence 478999999998889999999999999999999999999999999999999999999998742 24999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh
Q 006275 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (652)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (652)
++|++.+++..|+.||+...... .. ........+++.++++.
T Consensus 81 ~~q~~~~~~~~t~~e~l~~~~~~--------------~~------------------------~~~~~~~~~~~~~~l~~ 122 (213)
T cd03262 81 VFQQFNLFPHLTVLENITLAPIK--------------VK------------------------GMSKAEAEERALELLEK 122 (213)
T ss_pred EecccccCCCCcHHHHHHhHHHH--------------hc------------------------CCCHHHHHHHHHHHHHH
Confidence 99999887788999998532100 00 00011223445677888
Q ss_pred cCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhh
Q 006275 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQL 322 (652)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~ 322 (652)
+|+. +..++++.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|+ +.|+|||++||+++++.++
T Consensus 123 ~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~ 201 (213)
T cd03262 123 VGLA-DKADAYPAQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREV 201 (213)
T ss_pred cCCH-hHhhhCccccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHh
Confidence 8886 46788899999999999999999999999999999999999999999988875 3588999999999999999
Q ss_pred cCeEEEEcCCe
Q 006275 323 CTKIVETEMGV 333 (652)
Q Consensus 323 ~d~ii~l~~G~ 333 (652)
||+|++|++|+
T Consensus 202 ~d~i~~l~~g~ 212 (213)
T cd03262 202 ADRVIFMDDGR 212 (213)
T ss_pred CCEEEEEeCCc
Confidence 99999999886
No 128
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=6.7e-42 Score=366.27 Aligned_cols=205 Identities=26% Similarity=0.426 Sum_probs=181.2
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------cceec
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFE 494 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~ 494 (652)
.+|+++||+++|+++.+|+++||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.++. .+|++
T Consensus 3 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~v~ 82 (353)
T TIGR03265 3 PYLSIDNIRKRFGAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGIVF 82 (353)
T ss_pred cEEEEEEEEEEeCCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 3699999999999888999999999999999999999999999999999999999999999998763 23555
Q ss_pred ccccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEe
Q 006275 495 QNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLD 568 (652)
Q Consensus 495 ~~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLD 568 (652)
|+ ..+++.+||.+|+.+.... .....+.++++.+++. ++.++++.+|||||||||+|||||+.+|++||||
T Consensus 83 Q~--~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~-~~~~~~~~~LSgGq~QRvaLARaL~~~P~llLLD 159 (353)
T TIGR03265 83 QS--YALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLP-GSERKYPGQLSGGQQQRVALARALATSPGLLLLD 159 (353)
T ss_pred CC--cccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-chhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 54 4678899999999876432 1234678899999995 6889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 569 EPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 569 EPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
|||++||..++..+.+.|++. +.|+|+||||.+++..+||||++|++|++.. .|++++..+.
T Consensus 160 EP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~-~g~~~~~~~~ 225 (353)
T TIGR03265 160 EPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQ-VGTPQEIYRH 225 (353)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHHhC
Confidence 999999999999999988754 5699999999999999999999999999974 5777776543
No 129
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-42 Score=349.73 Aligned_cols=207 Identities=28% Similarity=0.411 Sum_probs=174.7
Q ss_pred eEEEeEEEEeCC-eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEEEE
Q 006275 98 VKLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (652)
Q Consensus 98 i~v~~ls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~~v 166 (652)
++++|++++|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (242)
T cd03295 1 IEFENVTKRYGGGKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGYV 80 (242)
T ss_pred CEEEEEEEEeCCcceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEEE
Confidence 478999999987 789999999999999999999999999999999999999999999998742 259999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhc
Q 006275 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (652)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (652)
+|++.+++..|++||+..... +. ..+.......+.++++.+
T Consensus 81 ~q~~~~~~~~tv~e~l~~~~~---------------~~------------------------~~~~~~~~~~~~~~l~~l 121 (242)
T cd03295 81 IQQIGLFPHMTVEENIALVPK---------------LL------------------------KWPKEKIRERADELLALV 121 (242)
T ss_pred ccCccccCCCcHHHHHHHHHH---------------Hc------------------------CCCHHHHHHHHHHHHHHc
Confidence 999988778899999852100 00 001112234566788889
Q ss_pred CCCc-ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHh
Q 006275 247 GFTA-DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQ 321 (652)
Q Consensus 247 gl~~-~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~ 321 (652)
|+.. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.+.|++ .|+|||++||+++++..
T Consensus 122 ~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~ 201 (242)
T cd03295 122 GLDPAEFADRYPHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFR 201 (242)
T ss_pred CCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHH
Confidence 9864 367888999999999999999999999999999999999999999999888753 38999999999999999
Q ss_pred hcCeEEEEcCCeEEEecCChHHH
Q 006275 322 LCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 322 ~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
+||+|++|++|++. ..|+.+++
T Consensus 202 ~~d~i~~l~~G~i~-~~~~~~~~ 223 (242)
T cd03295 202 LADRIAIMKNGEIV-QVGTPDEI 223 (242)
T ss_pred hCCEEEEEECCEEE-EecCHHHH
Confidence 99999999999984 55665543
No 130
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-42 Score=367.02 Aligned_cols=204 Identities=27% Similarity=0.422 Sum_probs=179.5
Q ss_pred EEEEEeeeeEe-CCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------cceec
Q 006275 424 VVTIKNLEFGY-EDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFE 494 (652)
Q Consensus 424 ~i~~~~v~~~y-~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~ 494 (652)
+|+++|++++| +++.+|+++||+|++||+++|+|||||||||||++|+|+.+|++|+|.++|.++. .+|++
T Consensus 3 ~l~i~~l~~~~~~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v~ 82 (356)
T PRK11650 3 GLKLQAVRKSYDGKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAMVF 82 (356)
T ss_pred EEEEEeEEEEeCCCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 58999999999 7788999999999999999999999999999999999999999999999998763 24555
Q ss_pred ccccccCCCCCCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEe
Q 006275 495 QNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLD 568 (652)
Q Consensus 495 ~~~~~~~~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLD 568 (652)
|+ ..+++++||.+|+.+..... ....+.++++.+++. +..++++.+|||||||||+|||||+.+|+|||||
T Consensus 83 Q~--~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LSgGq~QRvalARAL~~~P~llLLD 159 (356)
T PRK11650 83 QN--YALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELE-PLLDRKPRELSGGQRQRVAMGRAIVREPAVFLFD 159 (356)
T ss_pred CC--ccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCCh-hHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 54 46788999999998764321 124577899999994 6889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 569 EPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 569 EPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
|||++||+.++..+.+.|++. +.|+|+||||++++..+||+|++|++|++.. .|++++..+.
T Consensus 160 EP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~-~g~~~~~~~~ 225 (356)
T PRK11650 160 EPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQ-IGTPVEVYEK 225 (356)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEE-ECCHHHHHhC
Confidence 999999999999999888753 5699999999999999999999999999974 5777776543
No 131
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-42 Score=350.28 Aligned_cols=214 Identities=26% Similarity=0.428 Sum_probs=175.1
Q ss_pred eEEEeEEEEeCC-eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-------------ceE
Q 006275 98 VKLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------MKI 163 (652)
Q Consensus 98 i~v~~ls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-------------~~i 163 (652)
|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..+
T Consensus 1 l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 80 (241)
T cd03256 1 IEVENLSKTYPNGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQI 80 (241)
T ss_pred CEEeeEEEecCCccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhcc
Confidence 478999999987 789999999999999999999999999999999999999999999998742 249
Q ss_pred EEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHh
Q 006275 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (652)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (652)
+|++|++.+++..||++|+.......... . ..+. .........++.+++
T Consensus 81 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~------~-~~~~------------------------~~~~~~~~~~~~~~l 129 (241)
T cd03256 81 GMIFQQFNLIERLSVLENVLSGRLGRRST------W-RSLF------------------------GLFPKEEKQRALAAL 129 (241)
T ss_pred EEEcccCcccccCcHHHHHHhhhcccchh------h-hhhc------------------------ccCcHHHHHHHHHHH
Confidence 99999998877889999985321100000 0 0000 000011234566788
Q ss_pred hhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHH
Q 006275 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFL 319 (652)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l 319 (652)
+.+|+. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.++..+.++|++ .|+|||++|||++++
T Consensus 130 ~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~ 208 (241)
T cd03256 130 ERVGLL-DKAYQRADQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLA 208 (241)
T ss_pred HHcCCh-hhhCCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH
Confidence 888986 567888999999999999999999999999999999999999999999888753 489999999999999
Q ss_pred HhhcCeEEEEcCCeEEEecCChHHH
Q 006275 320 DQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 320 ~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
..+||++++|++|++. +.|+++++
T Consensus 209 ~~~~d~v~~l~~G~i~-~~~~~~~~ 232 (241)
T cd03256 209 REYADRIVGLKDGRIV-FDGPPAEL 232 (241)
T ss_pred HHhCCEEEEEECCEEE-eecCHHHh
Confidence 9999999999999974 66776654
No 132
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-42 Score=357.42 Aligned_cols=210 Identities=22% Similarity=0.297 Sum_probs=175.5
Q ss_pred ceEEEeEEEEeCCe-----eeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------
Q 006275 97 GVKLENISKSYKGV-----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (652)
Q Consensus 97 ~i~v~~ls~~y~~~-----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------- 160 (652)
+|+++|++|+|+.. ++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+
T Consensus 1 mi~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 1 MIKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred CEEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 48999999999632 59999999999999999999999999999999999999999999998743
Q ss_pred ---ceEEEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHH
Q 006275 161 ---MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLD 236 (652)
Q Consensus 161 ---~~i~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (652)
..|||++|+|. ..+..||.+|+...... . ..+..+..
T Consensus 81 ~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~--------------~-------------------------~~~~~~~~ 121 (288)
T PRK13643 81 PVRKKVGVVFQFPESQLFEETVLKDVAFGPQN--------------F-------------------------GIPKEKAE 121 (288)
T ss_pred HHHhhEEEEecCcchhcccchHHHHHHhHHHH--------------c-------------------------CCCHHHHH
Confidence 14999999972 22456999998522100 0 01112234
Q ss_pred HHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEe
Q 006275 237 AKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIIS 313 (652)
Q Consensus 237 ~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivs 313 (652)
.++.++++.+|+.....++++.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|+ +.|.|||++|
T Consensus 122 ~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vt 201 (288)
T PRK13643 122 KIAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVT 201 (288)
T ss_pred HHHHHHHHHcCCChhhccCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 5667888889986456789999999999999999999999999999999999999999999988764 3589999999
Q ss_pred cCHHHHHhhcCeEEEEcCCeEEEecCChHHHHH
Q 006275 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVL 346 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~~ 346 (652)
||++++..+||||++|++|++ .+.|+.+++..
T Consensus 202 Hd~~~~~~~~dri~~l~~G~i-~~~g~~~~~~~ 233 (288)
T PRK13643 202 HLMDDVADYADYVYLLEKGHI-ISCGTPSDVFQ 233 (288)
T ss_pred cCHHHHHHhCCEEEEEECCEE-EEECCHHHHHc
Confidence 999999999999999999998 47788777643
No 133
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=8.3e-42 Score=347.30 Aligned_cols=207 Identities=23% Similarity=0.367 Sum_probs=173.8
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------ceEEEEe
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLS 167 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------~~i~~v~ 167 (652)
+|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|++
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~~~ 80 (236)
T TIGR03864 1 ALEVAGLSFAYGARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGVVF 80 (236)
T ss_pred CEEEEeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEEeC
Confidence 3789999999998889999999999999999999999999999999999999999999998743 2599999
Q ss_pred ccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcC
Q 006275 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (652)
Q Consensus 168 Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (652)
|++.+++..|+++|+...... . ..........+.++++.+|
T Consensus 81 q~~~~~~~~t~~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~g 121 (236)
T TIGR03864 81 QQPTLDLDLSVRQNLRYHAAL---------------H------------------------GLSRAEARERIAALLARLG 121 (236)
T ss_pred CCCCCcccCcHHHHHHHHHHh---------------c------------------------CCCHHHHHHHHHHHHHHcC
Confidence 998887888999997521100 0 0001112334567788889
Q ss_pred CCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhc
Q 006275 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLC 323 (652)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~ 323 (652)
+. ...++.+.+||||||||++|||||+.+|++|||||||+|||+.+++.+.++|++ .|+|||++||+++++. .|
T Consensus 122 l~-~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~-~~ 199 (236)
T TIGR03864 122 LA-ERADDKVRELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIE-AD 199 (236)
T ss_pred Ch-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHh-hC
Confidence 86 567888999999999999999999999999999999999999999999887742 4889999999999996 49
Q ss_pred CeEEEEcCCeEEEecCChHHHH
Q 006275 324 TKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 324 d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
|+|++|++|++. ..|+.+++.
T Consensus 200 d~i~~l~~G~i~-~~~~~~~~~ 220 (236)
T TIGR03864 200 DRLVVLHRGRVL-ADGAAAELR 220 (236)
T ss_pred CEEEEEeCCeEE-EeCCHHHHH
Confidence 999999999984 567665543
No 134
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-42 Score=343.27 Aligned_cols=193 Identities=33% Similarity=0.487 Sum_probs=168.8
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------cceeccc
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQN 496 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~~~ 496 (652)
|+++|++++|+++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|.
T Consensus 1 l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v~q~ 80 (213)
T cd03259 1 LELKGLSKTYGSVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMVFQD 80 (213)
T ss_pred CeeeeeEEEeCCeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEEcCc
Confidence 47899999998889999999999999999999999999999999999999999999999998752 2345554
Q ss_pred ccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCC
Q 006275 497 QAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (652)
Q Consensus 497 ~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEP 570 (652)
..+++..|+.+|+...... .....+.++++.+++. +..++++.+||||||||++|||||+.+|++||||||
T Consensus 81 --~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrl~la~al~~~p~~lllDEP 157 (213)
T cd03259 81 --YALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLE-GLLNRYPHELSGGQQQRVALARALAREPSLLLLDEP 157 (213)
T ss_pred --hhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCh-hhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3456678999999764321 1123577889999995 567899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEe
Q 006275 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (652)
Q Consensus 571 t~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~ 620 (652)
|++||+.++..+.++|+++ +.|||++|||++++.++||++++|++|++..
T Consensus 158 t~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~ 211 (213)
T cd03259 158 LSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQ 211 (213)
T ss_pred cccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEe
Confidence 9999999999999999864 4699999999999999999999999999863
No 135
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.4e-42 Score=344.03 Aligned_cols=195 Identities=32% Similarity=0.477 Sum_probs=164.3
Q ss_pred EEEeEEEEeCC--eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEEEE
Q 006275 99 KLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (652)
Q Consensus 99 ~v~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~~v 166 (652)
+++|++++|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..|+|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 36899999987 789999999999999999999999999999999999999999999998742 259999
Q ss_pred eccCcc-CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh
Q 006275 167 SQEFEV-SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (652)
Q Consensus 167 ~Q~~~~-~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (652)
+|++.. ++..|+.+|+...... . .........++.++++.
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~ 121 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLEN---------------L------------------------GLPEEEIEERVEEALEL 121 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHHHHH
Confidence 999743 4678999998532100 0 00011123345677888
Q ss_pred cCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhh
Q 006275 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQL 322 (652)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~ 322 (652)
+|+. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|++ .|+|||++|||++++..+
T Consensus 122 ~~l~-~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~ 200 (211)
T cd03225 122 VGLE-GLRDRSPFTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLEL 200 (211)
T ss_pred cCcH-hhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHh
Confidence 8986 567888999999999999999999999999999999999999999999988743 478999999999999999
Q ss_pred cCeEEEEcCCe
Q 006275 323 CTKIVETEMGV 333 (652)
Q Consensus 323 ~d~ii~l~~G~ 333 (652)
||+|++|++|+
T Consensus 201 ~d~i~~l~~G~ 211 (211)
T cd03225 201 ADRVIVLEDGK 211 (211)
T ss_pred CCEEEEEeCCC
Confidence 99999998874
No 136
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-42 Score=356.86 Aligned_cols=209 Identities=22% Similarity=0.319 Sum_probs=174.5
Q ss_pred ceEEEeEEEEeCC-----eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------
Q 006275 97 GVKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (652)
Q Consensus 97 ~i~v~~ls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------- 160 (652)
.|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 4899999999974 469999999999999999999999999999999999999999999998742
Q ss_pred ---ceEEEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHH
Q 006275 161 ---MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLD 236 (652)
Q Consensus 161 ---~~i~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (652)
..|+|++|++. ..+..|+.||+...... . ........
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~---------------~------------------------~~~~~~~~ 122 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKN---------------F------------------------GFSEDEAK 122 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHH---------------c------------------------CCCHHHHH
Confidence 25999999973 23457999998522100 0 01111233
Q ss_pred HHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEe
Q 006275 237 AKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIIS 313 (652)
Q Consensus 237 ~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivs 313 (652)
.++.++++.+|+.....++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|+ +.|.|||++|
T Consensus 123 ~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivs 202 (287)
T PRK13641 123 EKALKWLKKVGLSEDLISKSPFELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVT 202 (287)
T ss_pred HHHHHHHHHcCCChhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 4567788899996456789999999999999999999999999999999999999999999988875 3589999999
Q ss_pred cCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
||++++.++||+|++|++|++ ...|+.+++.
T Consensus 203 H~~~~~~~~~d~v~~l~~G~i-~~~g~~~~~~ 233 (287)
T PRK13641 203 HNMDDVAEYADDVLVLEHGKL-IKHASPKEIF 233 (287)
T ss_pred CCHHHHHHhCCEEEEEECCEE-EEeCCHHHHh
Confidence 999999999999999999997 4667766543
No 137
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-42 Score=331.94 Aligned_cols=211 Identities=20% Similarity=0.319 Sum_probs=165.9
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCC-----cEEEECCCC---------
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDS-----GNVIKAKSN--------- 160 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~-----G~i~~~~~~--------- 160 (652)
...++++|+++.|+.+.+|++||++|++++++|++||+|||||||||++..+..... |+|.++|.+
T Consensus 5 ~~~~~~~~l~~yYg~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~ 84 (253)
T COG1117 5 IPAIEVRDLNLYYGDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVV 84 (253)
T ss_pred cceeEecceeEEECchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHH
Confidence 346999999999999999999999999999999999999999999999999987654 999998753
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHH
Q 006275 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (652)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (652)
.+||+|+|.|..++ +||+||+..+.+-. ...+ .++++
T Consensus 85 ~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~----g~~~-----------------------------------~~lde 124 (253)
T COG1117 85 ELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLH----GIKD-----------------------------------KELDE 124 (253)
T ss_pred HHHHHheeeccCCCCCC-chHHHHHHHhHHhh----ccch-----------------------------------HHHHH
Confidence 36999999998865 99999997543210 0000 01111
Q ss_pred HHHHHhhhcCCC---cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 006275 238 KVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (652)
Q Consensus 238 ~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIiv 312 (652)
.+++.|....|. .+.+++....||||||||++|||||+.+|+|||||||||+|||.+...+.+++.+ ..-|||+|
T Consensus 125 iVe~sLk~AaLWdEVKDrL~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviV 204 (253)
T COG1117 125 IVESSLKKAALWDEVKDRLHKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIV 204 (253)
T ss_pred HHHHHHHHhHhHHHhHHHhhCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEE
Confidence 111111111111 1345666788999999999999999999999999999999999998777776543 46799999
Q ss_pred ecCHHHHHhhcCeEEEEcCCeEEEecCChHHHHH
Q 006275 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVL 346 (652)
Q Consensus 313 sHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~~ 346 (652)
||++.-+.+++|+..++..|.++.| |+.+++..
T Consensus 205 THnmqQAaRvSD~taFf~~G~LvE~-g~T~~iF~ 237 (253)
T COG1117 205 THNMQQAARVSDYTAFFYLGELVEF-GPTDKIFT 237 (253)
T ss_pred eCCHHHHHHHhHhhhhhcccEEEEE-cCHHhhhc
Confidence 9999999999999999999998644 55455443
No 138
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-42 Score=364.91 Aligned_cols=205 Identities=27% Similarity=0.450 Sum_probs=180.8
Q ss_pred CcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------ccee
Q 006275 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYF 493 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~ 493 (652)
.++|+++|+++.|+++.+|+++||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.++. .+++
T Consensus 4 ~~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v 83 (351)
T PRK11432 4 KNFVVLKNITKRFGSNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDICMV 83 (351)
T ss_pred CcEEEEEeEEEEECCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 45799999999999888999999999999999999999999999999999999999999999998762 2355
Q ss_pred cccccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEE
Q 006275 494 EQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (652)
Q Consensus 494 ~~~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlL 567 (652)
+|+ ..+++.+|+.+|+.+.... ...+++.++++.+++. ++.++++.+|||||||||+|||||+.+|++|||
T Consensus 84 fQ~--~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~-~~~~r~~~~LSgGq~QRVaLARaL~~~P~lLLL 160 (351)
T PRK11432 84 FQS--YALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLA-GFEDRYVDQISGGQQQRVALARALILKPKVLLF 160 (351)
T ss_pred eCC--cccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 554 4678899999999976431 1134678899999994 678999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 568 DEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 568 DEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||||++||+.++..+.+.|++. +.|+|+||||.+++..+||||++|++|++.. .|++++...
T Consensus 161 DEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~-~g~~~~~~~ 226 (351)
T PRK11432 161 DEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQ-IGSPQELYR 226 (351)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHHh
Confidence 9999999999999999988753 5699999999999999999999999999974 577777654
No 139
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=5.3e-42 Score=361.13 Aligned_cols=199 Identities=29% Similarity=0.455 Sum_probs=169.6
Q ss_pred EEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------ceEEEEeccCccCCC
Q 006275 105 KSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLSQEFEVSMS 175 (652)
Q Consensus 105 ~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------~~i~~v~Q~~~~~~~ 175 (652)
++|+++++|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.+ ..+||++|++.+++.
T Consensus 1 k~y~~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 80 (302)
T TIGR01188 1 KVYGDFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDED 80 (302)
T ss_pred CeeCCeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCC
Confidence 46888889999999999999999999999999999999999999999999998743 259999999988888
Q ss_pred CCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccccC
Q 006275 176 RTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDR 255 (652)
Q Consensus 176 ~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~ 255 (652)
.||+||+..... +. ........+++.++++.+|+. +..++
T Consensus 81 ~tv~e~l~~~~~---------------~~------------------------~~~~~~~~~~~~~~l~~~~l~-~~~~~ 120 (302)
T TIGR01188 81 LTGRENLEMMGR---------------LY------------------------GLPKDEAEERAEELLELFELG-EAADR 120 (302)
T ss_pred CcHHHHHHHHHH---------------Hc------------------------CCCHHHHHHHHHHHHHHcCCh-hHhCC
Confidence 999999852110 00 001112234567889999996 56789
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCeEEEEcCC
Q 006275 256 LVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTKIVETEMG 332 (652)
Q Consensus 256 ~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~d~ii~l~~G 332 (652)
++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|+ +.|+|||++||+++++..+||+|++|++|
T Consensus 121 ~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G 200 (302)
T TIGR01188 121 PVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHG 200 (302)
T ss_pred chhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999988874 35899999999999999999999999999
Q ss_pred eEEEecCChHHH
Q 006275 333 VSRTYEGNYSQY 344 (652)
Q Consensus 333 ~~~~~~g~~~~~ 344 (652)
++. +.|+.+++
T Consensus 201 ~i~-~~g~~~~l 211 (302)
T TIGR01188 201 RII-AEGTPEEL 211 (302)
T ss_pred EEE-EECCHHHH
Confidence 984 66776554
No 140
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=8.6e-42 Score=343.60 Aligned_cols=196 Identities=24% Similarity=0.442 Sum_probs=166.1
Q ss_pred eEEEeEEEEeCC----eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-------------
Q 006275 98 VKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------- 160 (652)
Q Consensus 98 i~v~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------------- 160 (652)
|+++|++++|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 789999999964 469999999999999999999999999999999999999999999998632
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHH
Q 006275 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (652)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (652)
..|+|++|++.+++..|++||+..... .. ..+.....+++
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~---------------~~------------------------~~~~~~~~~~~ 122 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLL---------------IG------------------------KKSVKEAKERA 122 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHH---------------hc------------------------CCCHHHHHHHH
Confidence 359999999887778899999853210 00 00001123345
Q ss_pred HHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecC
Q 006275 240 SKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHD 315 (652)
Q Consensus 240 ~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd 315 (652)
.++++.+|+. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.++..+.++|++ .++|||++|||
T Consensus 123 ~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~ 201 (221)
T TIGR02211 123 YEMLEKVGLE-HRINHRPSELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHD 201 (221)
T ss_pred HHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 6788888986 567888999999999999999999999999999999999999999999888752 48899999999
Q ss_pred HHHHHhhcCeEEEEcCCeE
Q 006275 316 RAFLDQLCTKIVETEMGVS 334 (652)
Q Consensus 316 ~~~l~~~~d~ii~l~~G~~ 334 (652)
++++.. ||+|++|++|++
T Consensus 202 ~~~~~~-~d~v~~l~~G~i 219 (221)
T TIGR02211 202 LELAKK-LDRVLEMKDGQL 219 (221)
T ss_pred HHHHhh-cCEEEEEeCCEe
Confidence 999964 899999999976
No 141
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-42 Score=348.76 Aligned_cols=209 Identities=26% Similarity=0.424 Sum_probs=176.1
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------ceEEE
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAF 165 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----------~~i~~ 165 (652)
+|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|
T Consensus 3 ~l~~~~l~~~~~~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 82 (241)
T PRK10895 3 TLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIGY 82 (241)
T ss_pred eEEEeCcEEEeCCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCeEE
Confidence 5899999999998889999999999999999999999999999999999999999999998732 35999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh
Q 006275 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (652)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (652)
++|++.+++..|+.||+...... .. ..+.......+.++++.
T Consensus 83 ~~q~~~~~~~~tv~enl~~~~~~---------------~~-----------------------~~~~~~~~~~~~~~l~~ 124 (241)
T PRK10895 83 LPQEASIFRRLSVYDNLMAVLQI---------------RD-----------------------DLSAEQREDRANELMEE 124 (241)
T ss_pred eccCCcccccCcHHHHHhhhhhc---------------cc-----------------------ccCHHHHHHHHHHHHHH
Confidence 99999887778999998532100 00 00011123455677888
Q ss_pred cCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhh
Q 006275 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQL 322 (652)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~ 322 (652)
+|+. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|+ +.|.|||++||+++++..+
T Consensus 125 ~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~ 203 (241)
T PRK10895 125 FHIE-HLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAV 203 (241)
T ss_pred cCCH-HHhhcchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHh
Confidence 8886 45688899999999999999999999999999999999999999998887764 4589999999999999999
Q ss_pred cCeEEEEcCCeEEEecCChHHHH
Q 006275 323 CTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 323 ~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
||+++++++|++. +.|+++++.
T Consensus 204 ~d~v~~l~~G~i~-~~~~~~~~~ 225 (241)
T PRK10895 204 CERAYIVSQGHLI-AHGTPTEIL 225 (241)
T ss_pred cCEEEEEeCCeEE-eeCCHHHHh
Confidence 9999999999974 677776653
No 142
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-41 Score=347.30 Aligned_cols=208 Identities=26% Similarity=0.419 Sum_probs=176.4
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------------
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------------- 160 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------------- 160 (652)
+|+++|+++.|+++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 2 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 81 (242)
T PRK11124 2 SIQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRELR 81 (242)
T ss_pred EEEEEeeEEEECCeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHHH
Confidence 4899999999988889999999999999999999999999999999999999999999998742
Q ss_pred ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHH
Q 006275 161 MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVS 240 (652)
Q Consensus 161 ~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 240 (652)
..|+|++|++.+++..|+.||+....... . .........++.
T Consensus 82 ~~i~~~~q~~~~~~~~tv~e~i~~~~~~~-------------~-------------------------~~~~~~~~~~~~ 123 (242)
T PRK11124 82 RNVGMVFQQYNLWPHLTVQQNLIEAPCRV-------------L-------------------------GLSKDQALARAE 123 (242)
T ss_pred hheEEEecCccccCCCcHHHHHHHHHHHH-------------c-------------------------CCCHHHHHHHHH
Confidence 25999999998877889999985211000 0 000011233566
Q ss_pred HHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHH
Q 006275 241 KLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRA 317 (652)
Q Consensus 241 ~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~ 317 (652)
++++.+|+. ...++.+.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|+ +.++|||++||+++
T Consensus 124 ~~l~~~gl~-~~~~~~~~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~ 202 (242)
T PRK11124 124 KLLERLRLK-PYADRFPLHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE 202 (242)
T ss_pred HHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 778888986 56788899999999999999999999999999999999999999999988875 35899999999999
Q ss_pred HHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 318 FLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 318 ~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
++..+||++++|++|++. +.|+++++
T Consensus 203 ~~~~~~d~i~~l~~g~i~-~~~~~~~~ 228 (242)
T PRK11124 203 VARKTASRVVYMENGHIV-EQGDASCF 228 (242)
T ss_pred HHHHhcCEEEEEECCEEE-EeCCHHHh
Confidence 999999999999999984 67776654
No 143
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-42 Score=354.49 Aligned_cols=206 Identities=26% Similarity=0.380 Sum_probs=174.1
Q ss_pred ceEEEeEEEEeC-CeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEEE
Q 006275 97 GVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (652)
Q Consensus 97 ~i~v~~ls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~~ 165 (652)
+|+++|+++.|+ +.++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..|+|
T Consensus 4 ~l~~~~l~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 83 (274)
T PRK13647 4 IIEVEDLHFRYKDGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVGL 83 (274)
T ss_pred eEEEEEEEEEeCCCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEEE
Confidence 589999999996 4679999999999999999999999999999999999999999999998742 25999
Q ss_pred EeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhh
Q 006275 166 LSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (652)
Q Consensus 166 v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (652)
++|++. .++..||++|+...... ...+......++.++++
T Consensus 84 v~q~~~~~~~~~tv~e~l~~~~~~---------------------------------------~~~~~~~~~~~~~~~l~ 124 (274)
T PRK13647 84 VFQDPDDQVFSSTVWDDVAFGPVN---------------------------------------MGLDKDEVERRVEEALK 124 (274)
T ss_pred EecChhhhhccCcHHHHHHhhHHH---------------------------------------cCCCHHHHHHHHHHHHH
Confidence 999973 34567999998522100 00111123345667888
Q ss_pred hcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHh
Q 006275 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQ 321 (652)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~ 321 (652)
.+|+. +..++++.+|||||||||+|||||+.+|++|||||||++||+.++.++.++|+ +.|+|||++|||++++.+
T Consensus 125 ~~~L~-~~~~~~~~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~ 203 (274)
T PRK13647 125 AVRMW-DFRDKPPYHLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAE 203 (274)
T ss_pred HCCCH-HHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 89986 67889999999999999999999999999999999999999999999988874 348999999999999999
Q ss_pred hcCeEEEEcCCeEEEecCChHH
Q 006275 322 LCTKIVETEMGVSRTYEGNYSQ 343 (652)
Q Consensus 322 ~~d~ii~l~~G~~~~~~g~~~~ 343 (652)
+||+|++|++|++. +.|+.++
T Consensus 204 ~~d~i~~l~~G~i~-~~g~~~~ 224 (274)
T PRK13647 204 WADQVIVLKEGRVL-AEGDKSL 224 (274)
T ss_pred hCCEEEEEECCEEE-EECCHHH
Confidence 99999999999984 6677543
No 144
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-42 Score=339.76 Aligned_cols=207 Identities=28% Similarity=0.400 Sum_probs=182.9
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceeccc---------cee
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP---------NYF 493 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~---------~~~ 493 (652)
+++++++++++||+-.+++||||+|++||++|||||||||||||+++|.|+++|++|+|.++|.++.. +..
T Consensus 3 ~lL~v~~l~k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi~ 82 (250)
T COG0411 3 PLLEVRGLSKRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGIA 82 (250)
T ss_pred ceeeeccceeecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccce
Confidence 56899999999999999999999999999999999999999999999999999999999999998732 222
Q ss_pred cccccccCCCCCCHHHHHHHhhh------------------hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHH
Q 006275 494 EQNQAEALDLDKTVLETVAEAAE------------------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFC 555 (652)
Q Consensus 494 ~~~~~~~~~~~~tv~e~~~~~~~------------------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LA 555 (652)
+-.|...+++++||.||+..+.. ....+++.++|+.+|+. +..+++..+||+|||+|+.||
T Consensus 83 RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~-~~a~~~A~~LsyG~qR~LEIA 161 (250)
T COG0411 83 RTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLG-ELADRPAGNLSYGQQRRLEIA 161 (250)
T ss_pred eecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCc-hhhcchhhcCChhHhHHHHHH
Confidence 32344567899999999987632 11134578899999995 788999999999999999999
Q ss_pred HHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
|||+.+|++|+||||.+||.+.....+.+.|++. +.||++|-||++.+..+||||+||+.|++. ..|+|++..+.
T Consensus 162 rALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~I-AeG~P~eV~~d 240 (250)
T COG0411 162 RALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVI-AEGTPEEVRNN 240 (250)
T ss_pred HHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCc-ccCCHHHHhcC
Confidence 9999999999999999999999999999998765 359999999999999999999999999987 57999987654
No 145
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.5e-41 Score=360.81 Aligned_cols=213 Identities=21% Similarity=0.381 Sum_probs=178.3
Q ss_pred CCceEEEeEEEEeCC-------------eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-
Q 006275 95 SSGVKLENISKSYKG-------------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN- 160 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~-------------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~- 160 (652)
.++|+++|++++|+. .++++||||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+
T Consensus 6 ~~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i 85 (331)
T PRK15079 6 KVLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDL 85 (331)
T ss_pred CceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEEC
Confidence 457999999999962 469999999999999999999999999999999999999999999998742
Q ss_pred ------------ceEEEEeccC--ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHH
Q 006275 161 ------------MKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRK 226 (652)
Q Consensus 161 ------------~~i~~v~Q~~--~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (652)
.+|+|++|++ .+.+..||.+|+...... ..
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~--------------~~---------------------- 129 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRT--------------YH---------------------- 129 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHH--------------hc----------------------
Confidence 2599999998 466678999998532110 00
Q ss_pred HHhCChhcHHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--
Q 006275 227 AQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK-- 304 (652)
Q Consensus 227 ~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~-- 304 (652)
..++..+..+++.++++.+|+..+..++++.+|||||+|||+|||||+.+|++|||||||++||+.++..+.++|++
T Consensus 130 -~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~ 208 (331)
T PRK15079 130 -PKLSRQEVKDRVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQ 208 (331)
T ss_pred -cCCCHHHHHHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHH
Confidence 00111233456678889999965678999999999999999999999999999999999999999999999887742
Q ss_pred --CCCeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 305 --QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 305 --~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
.+.|||+||||++++..+||+|++|.+|++ +..|+.+++.
T Consensus 209 ~~~~~til~iTHdl~~~~~~~dri~vl~~G~i-ve~g~~~~i~ 250 (331)
T PRK15079 209 REMGLSLIFIAHDLAVVKHISDRVLVMYLGHA-VELGTYDEVY 250 (331)
T ss_pred HHcCCEEEEEeCCHHHHHHhCCEEEEEECCEE-EEEcCHHHHH
Confidence 489999999999999999999999999988 4667766554
No 146
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=7.6e-42 Score=365.65 Aligned_cols=201 Identities=24% Similarity=0.322 Sum_probs=172.7
Q ss_pred EEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------------ceEEEEeccC
Q 006275 105 KSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------MKIAFLSQEF 170 (652)
Q Consensus 105 ~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------------~~i~~v~Q~~ 170 (652)
|.|+++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..|+||+|++
T Consensus 1 ~~~~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~ 80 (363)
T TIGR01186 1 KKTGGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQF 80 (363)
T ss_pred CccCCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCC
Confidence 45788889999999999999999999999999999999999999999999998742 3699999999
Q ss_pred ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCc
Q 006275 171 EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTA 250 (652)
Q Consensus 171 ~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~ 250 (652)
++++.+||+||+...... ......+..+++.++++.+|+.
T Consensus 81 ~l~~~~TV~eNi~~~~~~---------------------------------------~~~~~~~~~~~~~~~l~~vgL~- 120 (363)
T TIGR01186 81 ALFPHMTILQNTSLGPEL---------------------------------------LGWPEQERKEKALELLKLVGLE- 120 (363)
T ss_pred cCCCCCCHHHHHHHHHHH---------------------------------------cCCCHHHHHHHHHHHHHhcCCc-
Confidence 998999999998632100 0011122345677889999996
Q ss_pred ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhcCeE
Q 006275 251 DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLCTKI 326 (652)
Q Consensus 251 ~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~l~~~~d~i 326 (652)
...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.+.|. +.++|||+||||++++..+||+|
T Consensus 121 ~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI 200 (363)
T TIGR01186 121 EYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRI 200 (363)
T ss_pred hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEE
Confidence 67899999999999999999999999999999999999999999999988763 34899999999999999999999
Q ss_pred EEEcCCeEEEecCChHHHHH
Q 006275 327 VETEMGVSRTYEGNYSQYVL 346 (652)
Q Consensus 327 i~l~~G~~~~~~g~~~~~~~ 346 (652)
++|++|++ ...|+.+++..
T Consensus 201 ~vl~~G~i-v~~g~~~ei~~ 219 (363)
T TIGR01186 201 VIMKAGEI-VQVGTPDEILR 219 (363)
T ss_pred EEEeCCEE-EeeCCHHHHHh
Confidence 99999997 46687776544
No 147
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-41 Score=359.10 Aligned_cols=212 Identities=17% Similarity=0.255 Sum_probs=175.6
Q ss_pred CCCceEEEeEEEEeCC-----eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------
Q 006275 94 ISSGVKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------- 160 (652)
Q Consensus 94 ~~~~i~v~~ls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-------- 160 (652)
..+.|+++|++|+|++ .++|+||||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+
T Consensus 18 ~~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~ 97 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNH 97 (320)
T ss_pred CCceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccc
Confidence 3457999999999964 359999999999999999999999999999999999999999999998621
Q ss_pred ------------------ceEEEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHH
Q 006275 161 ------------------MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFD 221 (652)
Q Consensus 161 ------------------~~i~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (652)
..|+||+|++. ..+..||+||+...... .
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~--------------~------------------ 145 (320)
T PRK13631 98 ELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVA--------------L------------------ 145 (320)
T ss_pred cccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHh--------------c------------------
Confidence 24999999973 22456999998532100 0
Q ss_pred HHHHHHHhCChhcHHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHH
Q 006275 222 LLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGY 301 (652)
Q Consensus 222 ~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~ 301 (652)
..+......++.++++.+|+.....++.+.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++
T Consensus 146 -------~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~ 218 (320)
T PRK13631 146 -------GVKKSEAKKLAKFYLNKMGLDDSYLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQL 218 (320)
T ss_pred -------CCCHHHHHHHHHHHHHHcCCChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHH
Confidence 0011122345667888899864567888999999999999999999999999999999999999999999888
Q ss_pred Hc---cCCCeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 302 LG---KQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 302 L~---~~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
|+ +.|.|||+||||++++..+||+|++|++|++. ..|+.+++.
T Consensus 219 L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~i~-~~g~~~~~~ 264 (320)
T PRK13631 219 ILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGKIL-KTGTPYEIF 264 (320)
T ss_pred HHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EeCCHHHHh
Confidence 74 35899999999999999999999999999984 678776654
No 148
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=7.4e-42 Score=345.54 Aligned_cols=202 Identities=23% Similarity=0.387 Sum_probs=168.2
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCC-----CCCCcEEEECCCC------------
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQE-----EPDSGNVIKAKSN------------ 160 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~-----~p~~G~i~~~~~~------------ 160 (652)
|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|++ +|++|+|.++|.+
T Consensus 1 i~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (227)
T cd03260 1 IELRDLNVYYGDKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLELR 80 (227)
T ss_pred CEEEEEEEEcCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHHHH
Confidence 57899999998888999999999999999999999999999999999999 9999999998742
Q ss_pred ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHH
Q 006275 161 MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVS 240 (652)
Q Consensus 161 ~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 240 (652)
..++|++|++.++ ..||+||+....... . ........+++.
T Consensus 81 ~~i~~~~q~~~~~-~~tv~e~l~~~~~~~---------------~-----------------------~~~~~~~~~~~~ 121 (227)
T cd03260 81 RRVGMVFQKPNPF-PGSIYDNVAYGLRLH---------------G-----------------------IKLKEELDERVE 121 (227)
T ss_pred hhEEEEecCchhc-cccHHHHHHhHHHhc---------------C-----------------------CCcHHHHHHHHH
Confidence 2599999998876 789999985321000 0 000011234566
Q ss_pred HHhhhcCCCcccccCC--CCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHccC--CCeEEEEecCH
Q 006275 241 KLMPELGFTADDGDRL--VASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQ--DVPMVIISHDR 316 (652)
Q Consensus 241 ~ll~~lgl~~~~~~~~--~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~--g~tvIivsHd~ 316 (652)
++++.+|+. +..++. +.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++. ..|||++|||+
T Consensus 122 ~~l~~~~l~-~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~ 200 (227)
T cd03260 122 EALRKAALW-DEVKDRLHALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNM 200 (227)
T ss_pred HHHHHcCCC-hHHhccCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccH
Confidence 788888986 344555 5999999999999999999999999999999999999999999887532 27999999999
Q ss_pred HHHHhhcCeEEEEcCCeEEEecCC
Q 006275 317 AFLDQLCTKIVETEMGVSRTYEGN 340 (652)
Q Consensus 317 ~~l~~~~d~ii~l~~G~~~~~~g~ 340 (652)
+++..+||+|+++++|++. +.|+
T Consensus 201 ~~~~~~~d~i~~l~~G~i~-~~g~ 223 (227)
T cd03260 201 QQAARVADRTAFLLNGRLV-EFGP 223 (227)
T ss_pred HHHHHhCCEEEEEeCCEEE-EecC
Confidence 9999999999999999974 4454
No 149
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-41 Score=355.84 Aligned_cols=209 Identities=24% Similarity=0.378 Sum_probs=174.1
Q ss_pred eEEEeEEEEeCC-----eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC------------
Q 006275 98 VKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------ 160 (652)
Q Consensus 98 i~v~~ls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------------ 160 (652)
|+++|++++|++ +++|+||||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 899999999964 359999999999999999999999999999999999999999999998742
Q ss_pred --ceEEEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHH
Q 006275 161 --MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (652)
Q Consensus 161 --~~i~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (652)
..|||++|+|. ..+..||.+|+...... ...+......
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~---------------------------------------~~~~~~~~~~ 123 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKN---------------------------------------FKMNLDEVKN 123 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHH---------------------------------------cCCCHHHHHH
Confidence 25899999973 22445999998522100 0011112344
Q ss_pred HHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEe
Q 006275 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIIS 313 (652)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivs 313 (652)
++.++++.+|+..+..++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .|.|||+||
T Consensus 124 ~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vt 203 (286)
T PRK13646 124 YAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVS 203 (286)
T ss_pred HHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 5677888899964567888999999999999999999999999999999999999999999888753 489999999
Q ss_pred cCHHHHHhhcCeEEEEcCCeEEEecCChHHHHH
Q 006275 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVL 346 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~~ 346 (652)
|+++++.++||||++|++|++. ..|+..++..
T Consensus 204 H~~~~~~~~~dri~~l~~G~i~-~~g~~~~~~~ 235 (286)
T PRK13646 204 HDMNEVARYADEVIVMKEGSIV-SQTSPKELFK 235 (286)
T ss_pred cCHHHHHHhCCEEEEEECCEEE-EECCHHHHHh
Confidence 9999999999999999999984 6787766543
No 150
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=3.1e-42 Score=323.93 Aligned_cols=195 Identities=30% Similarity=0.410 Sum_probs=173.3
Q ss_pred EEEEEeeeeEeCC-eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-------------
Q 006275 424 VVTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~-~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------- 489 (652)
||+++||++.|++ +++|+||||+|++||++-|+||||||||||||+|++..+|++|+|+++|.++.
T Consensus 1 mI~f~~V~k~Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 1 MIRFENVSKAYPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred CeeehhhhhhcCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 5899999999974 55999999999999999999999999999999999999999999999998863
Q ss_pred cceecccccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCC
Q 006275 490 PNYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (652)
Q Consensus 490 ~~~~~~~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~ 563 (652)
.+.++| +..+.++.||+||+++.... .-..++.+.|+.+|+. +..+..|.+|||||||||+||||++.+|+
T Consensus 81 IGvVFQ--D~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~-~k~~~lP~~LSGGEQQRvaIARAiV~~P~ 157 (223)
T COG2884 81 IGVVFQ--DFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLK-HKARALPSQLSGGEQQRVAIARAIVNQPA 157 (223)
T ss_pred eeeEee--eccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccc-hhhhcCccccCchHHHHHHHHHHHccCCC
Confidence 133443 45678899999999987532 1234688899999995 67889999999999999999999999999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEee
Q 006275 564 LLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDY 621 (652)
Q Consensus 564 lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~ 621 (652)
+||.||||.+||+.....+++++.++ +.||||.|||.+.+.++-.|++.|++|++...
T Consensus 158 vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d 218 (223)
T COG2884 158 VLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRD 218 (223)
T ss_pred eEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEec
Confidence 99999999999999999999998876 45999999999999999999999999999864
No 151
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.8e-41 Score=347.15 Aligned_cols=208 Identities=21% Similarity=0.297 Sum_probs=174.1
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCC-----CcEEEECCCC-----------
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD-----SGNVIKAKSN----------- 160 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~-----~G~i~~~~~~----------- 160 (652)
+|+++|++++|++.++++|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.+
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~ 80 (247)
T TIGR00972 1 AIEIENLNLFYGEKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVEL 80 (247)
T ss_pred CEEEEEEEEEECCeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHH
Confidence 378999999999888999999999999999999999999999999999999998 9999998742
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHH
Q 006275 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (652)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (652)
..++|++|++.+++ .|++||+...... .. .........++
T Consensus 81 ~~~i~~v~q~~~~~~-~tv~e~l~~~~~~---------------~~-----------------------~~~~~~~~~~~ 121 (247)
T TIGR00972 81 RRRVGMVFQKPNPFP-MSIYDNIAYGPRL---------------HG-----------------------IKDKKELDEIV 121 (247)
T ss_pred HhheEEEecCcccCC-CCHHHHHHhHHHh---------------cC-----------------------CCCHHHHHHHH
Confidence 25999999988766 9999998532100 00 00011223456
Q ss_pred HHHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 006275 240 SKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (652)
Q Consensus 240 ~~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsH 314 (652)
.++++.+|+.. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.++..+.++|++ .++|||+|||
T Consensus 122 ~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH 201 (247)
T TIGR00972 122 EESLKKAALWDEVKDRLHDSALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTH 201 (247)
T ss_pred HHHHHHcCCCcchhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEec
Confidence 67788888852 356788999999999999999999999999999999999999999999988753 2589999999
Q ss_pred CHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 315 d~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
+++++..+||+|++|++|++. ..|+.+++
T Consensus 202 ~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 230 (247)
T TIGR00972 202 NMQQAARISDRTAFFYDGELV-EYGPTEQI 230 (247)
T ss_pred CHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 999999999999999999984 56776554
No 152
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6e-42 Score=340.89 Aligned_cols=192 Identities=29% Similarity=0.451 Sum_probs=166.8
Q ss_pred EEEeeeeEeCC-eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-------cceecccc
Q 006275 426 TIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------PNYFEQNQ 497 (652)
Q Consensus 426 ~~~~v~~~y~~-~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------~~~~~~~~ 497 (652)
+++|++++|++ +.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|+.
T Consensus 1 ~~~~l~~~~~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q~~ 80 (205)
T cd03226 1 RIENISFSYKKGTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQDV 80 (205)
T ss_pred CcccEEEEeCCcCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEecCh
Confidence 46899999987 78999999999999999999999999999999999999999999999998752 34555543
Q ss_pred cccCCCCCCHHHHHHHhhhh--ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCC
Q 006275 498 AEALDLDKTVLETVAEAAED--WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 575 (652)
Q Consensus 498 ~~~~~~~~tv~e~~~~~~~~--~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD 575 (652)
.. ..+..|+.+|+...... ....++.++++.+++. +..++++.+||||||||++|||||+.+|++|||||||++||
T Consensus 81 ~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 81 DY-QLFTDSVREELLLGLKELDAGNEQAETVLKDLDLY-ALKERHPLSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred hh-hhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCc-hhcCCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 21 23467999999764322 1234678899999995 56799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEE
Q 006275 576 IPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQ 619 (652)
Q Consensus 576 ~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~ 619 (652)
+.+++.+.+.|+++ +.|||+||||++++..+||++++|++|+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999865 469999999999999999999999999873
No 153
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.2e-41 Score=342.82 Aligned_cols=203 Identities=25% Similarity=0.398 Sum_probs=167.7
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------ceEEEE
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAFL 166 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----------~~i~~v 166 (652)
|+++|++++|+++++++++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~ 80 (222)
T cd03224 1 LEVENLNAGYGKSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIGYV 80 (222)
T ss_pred CEEeeEEeecCCeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeEEe
Confidence 578999999998889999999999999999999999999999999999999999999998732 249999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhc
Q 006275 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (652)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (652)
+|++.+++..|+++|+....... . ......++.++++.+
T Consensus 81 ~q~~~~~~~~t~~~~l~~~~~~~-~----------------------------------------~~~~~~~~~~~l~~~ 119 (222)
T cd03224 81 PEGRRIFPELTVEENLLLGAYAR-R----------------------------------------RAKRKARLERVYELF 119 (222)
T ss_pred ccccccCCCCcHHHHHHHHhhhc-C----------------------------------------chhHHHHHHHHHHHH
Confidence 99998878889999985321100 0 000112233344444
Q ss_pred -CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhh
Q 006275 247 -GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQL 322 (652)
Q Consensus 247 -gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~ 322 (652)
++. ...++++.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|++ .++|||++|||++++..+
T Consensus 120 ~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~ 198 (222)
T cd03224 120 PRLK-ERRKQLAGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEI 198 (222)
T ss_pred Hhhh-hhhhCchhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHh
Confidence 233 456788999999999999999999999999999999999999999999988753 578999999999999999
Q ss_pred cCeEEEEcCCeEEEecCChHH
Q 006275 323 CTKIVETEMGVSRTYEGNYSQ 343 (652)
Q Consensus 323 ~d~ii~l~~G~~~~~~g~~~~ 343 (652)
||+|+++++|++. ..|+.++
T Consensus 199 ~d~i~~l~~G~i~-~~~~~~~ 218 (222)
T cd03224 199 ADRAYVLERGRVV-LEGTAAE 218 (222)
T ss_pred ccEEEEeeCCeEE-EeCCHHH
Confidence 9999999999974 5566544
No 154
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-41 Score=344.19 Aligned_cols=199 Identities=24% Similarity=0.446 Sum_probs=168.5
Q ss_pred CceEEEeEEEEeCC----eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------
Q 006275 96 SGVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------- 160 (652)
++|+++|+++.|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 4 ~~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~ 83 (233)
T PRK11629 4 ILLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAE 83 (233)
T ss_pred ceEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHH
Confidence 35999999999974 469999999999999999999999999999999999999999999998732
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHH
Q 006275 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (652)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (652)
..++|++|++.+++..|++||+..... +. ........+
T Consensus 84 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~---------------~~------------------------~~~~~~~~~ 124 (233)
T PRK11629 84 LRNQKLGFIYQFHHLLPDFTALENVAMPLL---------------IG------------------------KKKPAEINS 124 (233)
T ss_pred HHhccEEEEecCcccCCCCCHHHHHHHHHH---------------hc------------------------CCCHHHHHH
Confidence 359999999988778899999853210 00 001112234
Q ss_pred HHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEe
Q 006275 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIIS 313 (652)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivs 313 (652)
++.++++.+|+. +..++.+.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|++ .|+|||+||
T Consensus 125 ~~~~~l~~~gl~-~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~s 203 (233)
T PRK11629 125 RALEMLAAVGLE-HRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVT 203 (233)
T ss_pred HHHHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 566788889996 566888999999999999999999999999999999999999999999888743 489999999
Q ss_pred cCHHHHHhhcCeEEEEcCCeEE
Q 006275 314 HDRAFLDQLCTKIVETEMGVSR 335 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~~G~~~ 335 (652)
|+++++.. ++++++|++|++.
T Consensus 204 H~~~~~~~-~~~~~~l~~G~i~ 224 (233)
T PRK11629 204 HDLQLAKR-MSRQLEMRDGRLT 224 (233)
T ss_pred CCHHHHHh-hCEEEEEECCEEE
Confidence 99999976 5699999999874
No 155
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-41 Score=367.01 Aligned_cols=194 Identities=24% Similarity=0.344 Sum_probs=165.3
Q ss_pred eeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------------ceEEEEeccCccCCCC
Q 006275 111 TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------MKIAFLSQEFEVSMSR 176 (652)
Q Consensus 111 ~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------------~~i~~v~Q~~~~~~~~ 176 (652)
.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|++.+++..
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 38999999999999999999999999999999999999999999998742 2599999999988889
Q ss_pred CHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccccCC
Q 006275 177 TVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRL 256 (652)
Q Consensus 177 Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~ 256 (652)
||.||+...... . ........+++.++++.+|+. +..+++
T Consensus 122 Tv~enl~~~~~~---------------~------------------------~~~~~~~~~~~~e~L~~~gL~-~~~~~~ 161 (400)
T PRK10070 122 TVLDNTAFGMEL---------------A------------------------GINAEERREKALDALRQVGLE-NYAHSY 161 (400)
T ss_pred CHHHHHHHHHHh---------------c------------------------CCCHHHHHHHHHHHHHHcCCC-hhhhcC
Confidence 999998532110 0 001112234567788999996 578899
Q ss_pred CCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhcCeEEEEcCC
Q 006275 257 VASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLCTKIVETEMG 332 (652)
Q Consensus 257 ~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~l~~~~d~ii~l~~G 332 (652)
+.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|+ +.++|||+||||++++..+||+|++|++|
T Consensus 162 ~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G 241 (400)
T PRK10070 162 PDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNG 241 (400)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECC
Confidence 99999999999999999999999999999999999999999988774 25899999999999999999999999999
Q ss_pred eEEEecCChHHHH
Q 006275 333 VSRTYEGNYSQYV 345 (652)
Q Consensus 333 ~~~~~~g~~~~~~ 345 (652)
++. ..|+.+++.
T Consensus 242 ~i~-~~g~~~~l~ 253 (400)
T PRK10070 242 EVV-QVGTPDEIL 253 (400)
T ss_pred EEE-ecCCHHHHH
Confidence 984 667766553
No 156
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.1e-41 Score=345.60 Aligned_cols=216 Identities=29% Similarity=0.423 Sum_probs=177.9
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------ceEEE
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAF 165 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----------~~i~~ 165 (652)
+|+++|++++|+++++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|
T Consensus 2 ~i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 81 (242)
T TIGR03411 2 ILYLEGLSVSFDGFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIGR 81 (242)
T ss_pred eEEEEeeEEEcCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCeeE
Confidence 5899999999988889999999999999999999999999999999999999999999998742 24999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh
Q 006275 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (652)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (652)
++|++.+++..|++||+......... +...+. .........++.++++.
T Consensus 82 ~~q~~~~~~~~tv~~nl~~~~~~~~~-------~~~~~~------------------------~~~~~~~~~~~~~~l~~ 130 (242)
T TIGR03411 82 KFQKPTVFENLTVFENLELALPRDKS-------VFASLF------------------------FRLSAEEKDRIEEVLET 130 (242)
T ss_pred eccccccCCCCCHHHHHHHhhhcccc-------cccccc------------------------cccHHHHHHHHHHHHHH
Confidence 99999888888999998532110000 000000 00001123456778888
Q ss_pred cCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhc
Q 006275 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLC 323 (652)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~~ 323 (652)
+|+. +..++.+.+|||||||||+|||||+.+|++|||||||+|||+.++..+.++|++ .++|||++||+++++..+|
T Consensus 131 ~~l~-~~~~~~~~~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~ 209 (242)
T TIGR03411 131 IGLA-DEADRLAGLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIA 209 (242)
T ss_pred cCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhC
Confidence 8986 567888999999999999999999999999999999999999999999988753 3689999999999999999
Q ss_pred CeEEEEcCCeEEEecCChHHHH
Q 006275 324 TKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 324 d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
|+|+++++|++. +.|+.+++.
T Consensus 210 d~i~~l~~g~~~-~~~~~~~~~ 230 (242)
T TIGR03411 210 DKVTVLHQGSVL-AEGSLDQVQ 230 (242)
T ss_pred CEEEEEECCeEE-eeCCHHHHh
Confidence 999999999984 667766653
No 157
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2e-41 Score=360.89 Aligned_cols=207 Identities=26% Similarity=0.393 Sum_probs=180.1
Q ss_pred CCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------cc
Q 006275 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PN 491 (652)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~ 491 (652)
+..+|+++||+++|+++.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 38 ~~~~i~i~nl~k~y~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ig 117 (340)
T PRK13536 38 STVAIDLAGVSKSYGDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARARIG 117 (340)
T ss_pred CceeEEEEEEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhccEE
Confidence 345799999999999999999999999999999999999999999999999999999999999998752 23
Q ss_pred eecccccccCCCCCCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeE
Q 006275 492 YFEQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (652)
Q Consensus 492 ~~~~~~~~~~~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lL 565 (652)
|++|+ ..+++.+|+.+|+.+....+ ....+.++++.+++. +..++++.+|||||||||+||+||+.+|++|
T Consensus 118 ~v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~-~~~~~~~~~LS~G~kqrv~lA~aL~~~P~lL 194 (340)
T PRK13536 118 VVPQF--DNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLE-SKADARVSDLSGGMKRRLTLARALINDPQLL 194 (340)
T ss_pred EEeCC--ccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-hhhCCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 55544 45667899999997543211 123456789999995 5689999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 566 lLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
||||||+|||+.++..+.++|+++ +.|||++||+++++.++||||++|++|++. +.|++++..+.
T Consensus 195 iLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~-~~g~~~~l~~~ 262 (340)
T PRK13536 195 ILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKI-AEGRPHALIDE 262 (340)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EEcCHHHHHhh
Confidence 999999999999999999999875 469999999999999999999999999997 56888876543
No 158
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=6.7e-42 Score=342.51 Aligned_cols=199 Identities=31% Similarity=0.485 Sum_probs=165.4
Q ss_pred EEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----ceEEEEeccCccC
Q 006275 99 KLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----MKIAFLSQEFEVS 173 (652)
Q Consensus 99 ~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----~~i~~v~Q~~~~~ 173 (652)
+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|++.+.
T Consensus 1 ~~~~l~~~~~~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~~~~ 80 (213)
T cd03235 1 EVEDLTVSYGGHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRRSID 80 (213)
T ss_pred CcccceeEECCEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEeccccccc
Confidence 36899999988889999999999999999999999999999999999999999999999853 3699999998653
Q ss_pred --CCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcc
Q 006275 174 --MSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTAD 251 (652)
Q Consensus 174 --~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~ 251 (652)
+..|++||+......... .. ........+++.++++.+|+. +
T Consensus 81 ~~~~~tv~e~l~~~~~~~~~----------~~-------------------------~~~~~~~~~~~~~~l~~~~l~-~ 124 (213)
T cd03235 81 RDFPISVRDVVLMGLYGHKG----------LF-------------------------RRLSKADKAKVDEALERVGLS-E 124 (213)
T ss_pred cCCCCcHHHHHHhccccccc----------cc-------------------------cCCCHHHHHHHHHHHHHcCCH-H
Confidence 347999998532110000 00 000011234566788888986 5
Q ss_pred cccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcCeEEE
Q 006275 252 DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCTKIVE 328 (652)
Q Consensus 252 ~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~~d~ii~ 328 (652)
..++++.+|||||||||+|||||+.+|++|||||||+|||+.++..+.++|++ .++|||++|||++++.++||+|++
T Consensus 125 ~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~ 204 (213)
T cd03235 125 LADRQIGELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLL 204 (213)
T ss_pred HHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEE
Confidence 67888999999999999999999999999999999999999999999888743 578999999999999999999999
Q ss_pred EcCCe
Q 006275 329 TEMGV 333 (652)
Q Consensus 329 l~~G~ 333 (652)
|++|.
T Consensus 205 l~~~~ 209 (213)
T cd03235 205 LNRTV 209 (213)
T ss_pred EcCcE
Confidence 98864
No 159
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2.1e-41 Score=342.48 Aligned_cols=199 Identities=27% Similarity=0.400 Sum_probs=168.6
Q ss_pred CceEEEeEEEEeCC----eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------
Q 006275 96 SGVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------- 160 (652)
++|+++|++++|++ .++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 84 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAK 84 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHH
Confidence 46999999999975 359999999999999999999999999999999999999999999998732
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHH
Q 006275 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (652)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (652)
..++|++|++.+++..|+.||+..... .. ........+
T Consensus 85 ~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~---------------~~------------------------~~~~~~~~~ 125 (228)
T PRK10584 85 LRAKHVGFVFQSFMLIPTLNALENVELPAL---------------LR------------------------GESSRQSRN 125 (228)
T ss_pred HHhheEEEEEcccccCCCcCHHHHHHHHHH---------------hc------------------------CCCHHHHHH
Confidence 259999999988777899999853210 00 000112234
Q ss_pred HHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEe
Q 006275 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIIS 313 (652)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivs 313 (652)
++.++++.+|+. +..++++.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|+ +.|.|||++|
T Consensus 126 ~~~~~l~~~~l~-~~~~~~~~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~s 204 (228)
T PRK10584 126 GAKALLEQLGLG-KRLDHLPAQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVT 204 (228)
T ss_pred HHHHHHHHcCCH-hHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 567788888986 56788899999999999999999999999999999999999999999998874 3488999999
Q ss_pred cCHHHHHhhcCeEEEEcCCeEE
Q 006275 314 HDRAFLDQLCTKIVETEMGVSR 335 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~~G~~~ 335 (652)
||++++. .||+++++++|++.
T Consensus 205 H~~~~~~-~~d~i~~l~~g~i~ 225 (228)
T PRK10584 205 HDLQLAA-RCDRRLRLVNGQLQ 225 (228)
T ss_pred cCHHHHH-hCCEEEEEECCEEE
Confidence 9999985 59999999999874
No 160
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.1e-41 Score=356.67 Aligned_cols=205 Identities=26% Similarity=0.400 Sum_probs=177.2
Q ss_pred CcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------cce
Q 006275 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNY 492 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~~ 492 (652)
..+|+++|++++|+++.+|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 2 ~~~i~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~ 81 (303)
T TIGR01288 2 NVAIDLVGVSKSYGDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAIGV 81 (303)
T ss_pred CcEEEEEeEEEEeCCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcEEE
Confidence 34799999999999889999999999999999999999999999999999999999999999997652 235
Q ss_pred ecccccccCCCCCCHHHHHHHhhhh--cc----HHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEE
Q 006275 493 FEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (652)
Q Consensus 493 ~~~~~~~~~~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLl 566 (652)
++|+ ..+++..|+.+|+...... .. ...+.++++.+++. +..++++.+|||||||||+|||||+.+|++||
T Consensus 82 v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~lll 158 (303)
T TIGR01288 82 VPQF--DNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLE-SKADVRVALLSGGMKRRLTLARALINDPQLLI 158 (303)
T ss_pred Eecc--ccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCh-hHhcCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 5554 3456678999999753211 11 23466789999985 56799999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 567 LDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 567 LDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
|||||+|||+.++..+.++|+++ +.|||++|||++++..+|||+++|++|++. ..|++++...
T Consensus 159 LDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 224 (303)
T TIGR01288 159 LDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKI-AEGRPHALID 224 (303)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EEcCHHHHHh
Confidence 99999999999999999999875 469999999999999999999999999987 4688777654
No 161
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.3e-41 Score=343.80 Aligned_cols=202 Identities=26% Similarity=0.414 Sum_probs=166.0
Q ss_pred ceEEEeEEEEeCCe----eeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC------------
Q 006275 97 GVKLENISKSYKGV----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------ 160 (652)
Q Consensus 97 ~i~v~~ls~~y~~~----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------------ 160 (652)
+|+++|++++|++. ++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 1 ~l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (228)
T cd03257 1 LLEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIR 80 (228)
T ss_pred CeEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHh
Confidence 37899999999765 79999999999999999999999999999999999999999999998742
Q ss_pred -ceEEEEeccC--ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHH
Q 006275 161 -MKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (652)
Q Consensus 161 -~~i~~v~Q~~--~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (652)
..++|++|++ .+.+..|+++|+....... .. .. .......
T Consensus 81 ~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~--------------~~--~~---------------------~~~~~~~ 123 (228)
T cd03257 81 RKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIH--------------GK--LS---------------------KKEARKE 123 (228)
T ss_pred hccEEEEecCchhhcCCcCCHHHHHHHHHHhc--------------cC--Cc---------------------HHHHHHH
Confidence 2599999998 3556789999985321000 00 00 0000011
Q ss_pred HHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEe
Q 006275 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIIS 313 (652)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivs 313 (652)
.+.++++.+|+.....++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|++ .|+|||++|
T Consensus 124 ~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~s 203 (228)
T cd03257 124 AVLLLLVGVGLPEEVLNRYPHELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFIT 203 (228)
T ss_pred HHHHHHHHCCCChhHhhCCchhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 1235677788854567888999999999999999999999999999999999999999999988753 388999999
Q ss_pred cCHHHHHhhcCeEEEEcCCeEE
Q 006275 314 HDRAFLDQLCTKIVETEMGVSR 335 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~~G~~~ 335 (652)
|+++++..+||+|++|++|++.
T Consensus 204 H~~~~~~~~~d~i~~l~~G~i~ 225 (228)
T cd03257 204 HDLGVVAKIADRVAVMYAGKIV 225 (228)
T ss_pred CCHHHHHHhcCeEEEEeCCEEE
Confidence 9999999999999999999874
No 162
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-41 Score=340.37 Aligned_cols=198 Identities=28% Similarity=0.391 Sum_probs=171.2
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------cceecc
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYFEQ 495 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~~~~~ 495 (652)
|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|
T Consensus 1 i~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 80 (220)
T cd03265 1 IEVENLVKKYGDFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGIVFQ 80 (220)
T ss_pred CEEEEEEEEECCEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEEecC
Confidence 57899999999889999999999999999999999999999999999999999999999997652 234454
Q ss_pred cccccCCCCCCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeC
Q 006275 496 NQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (652)
Q Consensus 496 ~~~~~~~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDE 569 (652)
+ ..+++..|+.+|+....... ....+.++++.+++. +..++++.+|||||||||+||||++.+|++|||||
T Consensus 81 ~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qr~~la~al~~~p~llllDE 157 (220)
T cd03265 81 D--LSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLL-EAADRLVKTYSGGMRRRLEIARSLVHRPEVLFLDE 157 (220)
T ss_pred C--ccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-HHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 4 34566789999997642211 123578899999995 66799999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChh
Q 006275 570 PTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYN 626 (652)
Q Consensus 570 Pt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~ 626 (652)
||++||+.+++.+.++|++. +.|||+||||++++..+|||+++|++|++.. .|+++
T Consensus 158 Pt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~-~~~~~ 217 (220)
T cd03265 158 PTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIA-EGTPE 217 (220)
T ss_pred CccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEE-eCChH
Confidence 99999999999999998763 5699999999999999999999999999974 35544
No 163
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-41 Score=345.42 Aligned_cols=203 Identities=23% Similarity=0.359 Sum_probs=171.7
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEEEE
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~~v 166 (652)
.|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|+
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~~ 82 (241)
T PRK14250 3 EIEFKEVSYSSFGKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIGMV 82 (241)
T ss_pred eEEEEeEEEEeCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEEEE
Confidence 5899999999988889999999999999999999999999999999999999999999998742 259999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhc
Q 006275 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (652)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (652)
+|++.++. .|+++|+...... . . ....++.++++.+
T Consensus 83 ~q~~~~~~-~tv~e~l~~~~~~---------------~--------------------------~--~~~~~~~~~l~~~ 118 (241)
T PRK14250 83 FQQPHLFE-GTVKDNIEYGPML---------------K--------------------------G--EKNVDVEYYLSIV 118 (241)
T ss_pred ecCchhch-hhHHHHHhcchhh---------------c--------------------------C--cHHHHHHHHHHHc
Confidence 99987754 6999997421000 0 0 0012345677888
Q ss_pred CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhh
Q 006275 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQL 322 (652)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~ 322 (652)
|+..+..++++.+||||||||++|||||+.+|++|||||||+|||+.+++++.+.|++ .|.|||++|||++++..+
T Consensus 119 ~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~ 198 (241)
T PRK14250 119 GLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRI 198 (241)
T ss_pred CCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHh
Confidence 8864467888999999999999999999999999999999999999999999887753 489999999999999999
Q ss_pred cCeEEEEcCCeEEEecCChHHH
Q 006275 323 CTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 323 ~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
||+|+++++|++. ..|...++
T Consensus 199 ~d~i~~l~~G~i~-~~~~~~~~ 219 (241)
T PRK14250 199 GDYTAFLNKGILV-EYAKTYDF 219 (241)
T ss_pred CCEEEEEeCCEEE-EeCCHHHH
Confidence 9999999999985 45655444
No 164
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-41 Score=348.46 Aligned_cols=207 Identities=29% Similarity=0.390 Sum_probs=174.7
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEEEE
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~~v 166 (652)
+|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 2 ~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~~ 81 (258)
T PRK13548 2 MLEARNLSVRLGGRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAVL 81 (258)
T ss_pred eEEEEeEEEEeCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEEE
Confidence 4899999999998889999999999999999999999999999999999999999999998742 259999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhc
Q 006275 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (652)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (652)
+|++.+++..|++||+....... ..........+.++++.+
T Consensus 82 ~q~~~~~~~~tv~e~l~~~~~~~---------------------------------------~~~~~~~~~~~~~~l~~~ 122 (258)
T PRK13548 82 PQHSSLSFPFTVEEVVAMGRAPH---------------------------------------GLSRAEDDALVAAALAQV 122 (258)
T ss_pred ccCCcCCCCCCHHHHHHhhhccc---------------------------------------CCCcHHHHHHHHHHHHHc
Confidence 99988877889999985321000 000011223456778888
Q ss_pred CCCcccccCCCCCCChHHHHHHHHHHHHc------cCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCH
Q 006275 247 GFTADDGDRLVASFSSGWQMRMSLGKILL------QDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDR 316 (652)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRv~LAraL~------~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~ 316 (652)
|+. +..++.+.+|||||||||+|||||+ .+|++|||||||+|||+.++..+.++|+ +.|.|||++|||+
T Consensus 123 ~l~-~~~~~~~~~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~ 201 (258)
T PRK13548 123 DLA-HLAGRDYPQLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDL 201 (258)
T ss_pred CCH-hHhcCCcccCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCH
Confidence 886 5678899999999999999999999 5999999999999999999999888764 4588999999999
Q ss_pred HHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 317 AFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 317 ~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
+++..+||+|++|++|++. ..|+++++
T Consensus 202 ~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 228 (258)
T PRK13548 202 NLAARYADRIVLLHQGRLV-ADGTPAEV 228 (258)
T ss_pred HHHHHhcCEEEEEECCEEE-eeCCHHHH
Confidence 9999999999999999874 56766554
No 165
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-41 Score=344.26 Aligned_cols=203 Identities=28% Similarity=0.447 Sum_probs=175.0
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------cceecc
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQ 495 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~~ 495 (652)
+|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|
T Consensus 2 ~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q 81 (239)
T cd03296 2 SIEVRNVSKRFGDFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFVFQ 81 (239)
T ss_pred EEEEEeEEEEECCEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEEec
Confidence 489999999999889999999999999999999999999999999999999999999999997652 234444
Q ss_pred cccccCCCCCCHHHHHHHhhhh--------c--cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeE
Q 006275 496 NQAEALDLDKTVLETVAEAAED--------W--RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (652)
Q Consensus 496 ~~~~~~~~~~tv~e~~~~~~~~--------~--~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lL 565 (652)
+ ..+++..|+.+|+...... . ..+.+.++++.+++. ...++++.+|||||||||+|||||+.+|++|
T Consensus 82 ~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~ll 158 (239)
T cd03296 82 H--YALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLD-WLADRYPAQLSGGQRQRVALARALAVEPKVL 158 (239)
T ss_pred C--CcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCCh-hhhhcChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 3 3456678999999764321 1 123467889999994 6678999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 566 VLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 566 lLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||||||++||+.+++.+.++|.++ +.|||+||||++++..+||++++|++|++. ..|++++..+
T Consensus 159 llDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 226 (239)
T cd03296 159 LLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIE-QVGTPDEVYD 226 (239)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEE-EecCHHHHhc
Confidence 999999999999999999999864 469999999999999999999999999997 4577776543
No 166
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=2.3e-41 Score=347.40 Aligned_cols=208 Identities=25% Similarity=0.423 Sum_probs=175.7
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------------
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------------- 160 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------------- 160 (652)
|+++|+++.|+++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 1 i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~~ 80 (252)
T TIGR03005 1 VRFSDVTKRFGILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPADEK 80 (252)
T ss_pred CEEEEEEEEeCCeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccchh
Confidence 478999999988889999999999999999999999999999999999999999999988632
Q ss_pred ------ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhc
Q 006275 161 ------MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDT 234 (652)
Q Consensus 161 ------~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (652)
..++|++|++.+++..|+.+|+....... . ......
T Consensus 81 ~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--------------~------------------------~~~~~~ 122 (252)
T TIGR03005 81 HLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--------------L------------------------GMARAE 122 (252)
T ss_pred HHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--------------c------------------------CCCHHH
Confidence 25999999998878899999985321000 0 001112
Q ss_pred HHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEE
Q 006275 235 LDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMV 310 (652)
Q Consensus 235 ~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvI 310 (652)
....+.++++.+|+. +..++.+.+|||||+||++|||||+.+|++|||||||++||+.++..+.++|++ .|.|||
T Consensus 123 ~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii 201 (252)
T TIGR03005 123 AEKRAMELLDMVGLA-DKADHMPAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTML 201 (252)
T ss_pred HHHHHHHHHHHcCCh-hHhhcChhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEE
Confidence 234566778888986 567888999999999999999999999999999999999999999999887743 489999
Q ss_pred EEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 311 IISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 311 ivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
++||+++++..+|||+++|++|++. ..|+++++.
T Consensus 202 ivsH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 235 (252)
T TIGR03005 202 LVTHEMGFAREFADRVCFFDKGRIV-EQGKPDEIF 235 (252)
T ss_pred EEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHHh
Confidence 9999999999999999999999984 667766654
No 167
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-41 Score=357.76 Aligned_cols=211 Identities=22% Similarity=0.387 Sum_probs=177.2
Q ss_pred CceEEEeEEEEeCC----------eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----
Q 006275 96 SGVKLENISKSYKG----------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~----------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----- 160 (652)
+.|+++|+++.|+. .++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.+
T Consensus 4 ~~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~ 83 (327)
T PRK11308 4 PLLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKAD 83 (327)
T ss_pred ceEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCC
Confidence 46999999999962 469999999999999999999999999999999999999999999998742
Q ss_pred --------ceEEEEeccC--ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhC
Q 006275 161 --------MKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAV 230 (652)
Q Consensus 161 --------~~i~~v~Q~~--~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (652)
.+|+|++|++ .+.+..|+.+++...+... ...
T Consensus 84 ~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~--------------------------------------~~~ 125 (327)
T PRK11308 84 PEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLIN--------------------------------------TSL 125 (327)
T ss_pred HHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHc--------------------------------------cCC
Confidence 2599999998 4666789988874221000 001
Q ss_pred ChhcHHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCC
Q 006275 231 NLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQD 306 (652)
Q Consensus 231 ~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g 306 (652)
...+...++.++++.+|+.....++++.+|||||||||+|||||+.+|++||+||||++||+.++.++.++|+ +.|
T Consensus 126 ~~~~~~~~~~~~l~~~gL~~~~~~~~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g 205 (327)
T PRK11308 126 SAAERREKALAMMAKVGLRPEHYDRYPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELG 205 (327)
T ss_pred CHHHHHHHHHHHHHHCCCChHHhcCCCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcC
Confidence 1122345677889999996556799999999999999999999999999999999999999999999988774 358
Q ss_pred CeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 307 VPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 307 ~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
.|||+||||++.+.++||+|++|.+|+++ ..|+.+++.
T Consensus 206 ~til~iTHdl~~~~~~adrv~vm~~G~iv-e~g~~~~~~ 243 (327)
T PRK11308 206 LSYVFISHDLSVVEHIADEVMVMYLGRCV-EKGTKEQIF 243 (327)
T ss_pred CEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHHHHh
Confidence 99999999999999999999999999984 667765543
No 168
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.7e-41 Score=349.42 Aligned_cols=209 Identities=25% Similarity=0.463 Sum_probs=173.4
Q ss_pred ceEEEeEEEEeC---------CeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-------
Q 006275 97 GVKLENISKSYK---------GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------- 160 (652)
Q Consensus 97 ~i~v~~ls~~y~---------~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------- 160 (652)
+|+++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 589999999995 3579999999999999999999999999999999999999999999998742
Q ss_pred ------ceEEEEeccCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCCh
Q 006275 161 ------MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNL 232 (652)
Q Consensus 161 ------~~i~~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (652)
..|+|++|++. +.+..|++||+...... .. .+..
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~--------------~~------------------------~~~~ 123 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRH--------------LT------------------------SLDE 123 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHH--------------hc------------------------CCCH
Confidence 25999999973 44568999997522100 00 0011
Q ss_pred hcHHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCe
Q 006275 233 DTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVP 308 (652)
Q Consensus 233 ~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~t 308 (652)
.....++.++++.+|+.....++++.+|||||||||+|||||+.+|++|||||||++||+.++..+.++|++ .|+|
T Consensus 124 ~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~t 203 (265)
T TIGR02769 124 SEQKARIAELLDMVGLRSEDADKLPRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTA 203 (265)
T ss_pred HHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcE
Confidence 122345667888889864567888999999999999999999999999999999999999999988887743 4899
Q ss_pred EEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 309 MVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 309 vIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
||+||||++++..+||++++|++|++. ..|+.+++
T Consensus 204 iiivsH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 238 (265)
T TIGR02769 204 YLFITHDLRLVQSFCQRVAVMDKGQIV-EECDVAQL 238 (265)
T ss_pred EEEEeCCHHHHHHHhcEEEEEeCCEEE-EECCHHHH
Confidence 999999999999999999999999884 66776554
No 169
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=3.1e-41 Score=344.36 Aligned_cols=213 Identities=24% Similarity=0.318 Sum_probs=173.8
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCC--CCCCcEEEECCCC-----------ceEE
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQE--EPDSGNVIKAKSN-----------MKIA 164 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~--~p~~G~i~~~~~~-----------~~i~ 164 (652)
|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|++ +|++|+|.++|.+ ..++
T Consensus 1 l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (243)
T TIGR01978 1 LKIKDLHVSVEDKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGLF 80 (243)
T ss_pred CeEeeEEEEECCEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccceE
Confidence 47899999999888999999999999999999999999999999999995 7999999998742 2389
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhh
Q 006275 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (652)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (652)
|++|++.+++..|+.+|+....... . ..... ...+.....+++.++++
T Consensus 81 ~v~q~~~~~~~~t~~~~~~~~~~~~----------~-~~~~~---------------------~~~~~~~~~~~~~~~l~ 128 (243)
T TIGR01978 81 LAFQYPEEIPGVSNLEFLRSALNAR----------R-SARGE---------------------EPLDLLDFLKLLKAKLA 128 (243)
T ss_pred eeeccccccCCcCHHHHHHHHHHHh----------h-ccccc---------------------ccccHHHHHHHHHHHHH
Confidence 9999998888889999985321100 0 00000 00011123346678889
Q ss_pred hcCCCcccccCCCC-CCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHH
Q 006275 245 ELGFTADDGDRLVA-SFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLD 320 (652)
Q Consensus 245 ~lgl~~~~~~~~~~-~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~ 320 (652)
.+|+.....++++. +|||||||||+|||||+.+|++|||||||++||+.+++++.++|++ .|+|||+||||++++.
T Consensus 129 ~~~l~~~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~ 208 (243)
T TIGR01978 129 LLGMDEEFLNRSVNEGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLN 208 (243)
T ss_pred HcCCchhhcccccccCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHH
Confidence 99996455677776 5999999999999999999999999999999999999999988753 4789999999999999
Q ss_pred hh-cCeEEEEcCCeEEEecCChHH
Q 006275 321 QL-CTKIVETEMGVSRTYEGNYSQ 343 (652)
Q Consensus 321 ~~-~d~ii~l~~G~~~~~~g~~~~ 343 (652)
.+ ||++++|++|++. +.|++++
T Consensus 209 ~~~~d~i~~l~~G~i~-~~g~~~~ 231 (243)
T TIGR01978 209 YIKPDYVHVLLDGRIV-KSGDVEL 231 (243)
T ss_pred hhcCCeEEEEeCCEEE-EecCHHH
Confidence 98 8999999999984 6677553
No 170
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=3.7e-41 Score=362.47 Aligned_cols=207 Identities=26% Similarity=0.436 Sum_probs=181.1
Q ss_pred CCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------cce
Q 006275 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNY 492 (652)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~ 492 (652)
..++|+++|++++|+++.+|+++||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.++. .+|
T Consensus 11 ~~~~L~l~~l~~~~~~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 90 (375)
T PRK09452 11 LSPLVELRGISKSFDGKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVNT 90 (375)
T ss_pred CCceEEEEEEEEEECCeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 345699999999999888999999999999999999999999999999999999999999999998763 235
Q ss_pred ecccccccCCCCCCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEE
Q 006275 493 FEQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (652)
Q Consensus 493 ~~~~~~~~~~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLl 566 (652)
++|+ ..+++.+||.+|+.+..... ...++.++++.+++. +..++++.+|||||||||+|||||+.+|++||
T Consensus 91 vfQ~--~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~p~~LSgGq~QRVaLARaL~~~P~llL 167 (375)
T PRK09452 91 VFQS--YALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLE-EFAQRKPHQLSGGQQQRVAIARAVVNKPKVLL 167 (375)
T ss_pred EecC--cccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 5554 46788999999998764311 123577889999995 68899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 567 LDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 567 LDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
|||||++||..++..|.+.|++. +.|+|+||||.+++..+||||++|++|++.. .|+++++++.
T Consensus 168 LDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~-~g~~~~i~~~ 235 (375)
T PRK09452 168 LDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQ-DGTPREIYEE 235 (375)
T ss_pred EeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHHhC
Confidence 99999999999999999988754 5699999999999999999999999999974 4777765543
No 171
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-41 Score=346.72 Aligned_cols=200 Identities=28% Similarity=0.416 Sum_probs=173.6
Q ss_pred CcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-----cceeccc
Q 006275 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----PNYFEQN 496 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----~~~~~~~ 496 (652)
+++|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|.
T Consensus 10 ~~~l~i~~l~~~~~~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v~q~ 89 (257)
T PRK11247 10 GTPLLLNAVSKRYGERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLMFQD 89 (257)
T ss_pred CCcEEEEEEEEEECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEEecC
Confidence 45699999999999888999999999999999999999999999999999999999999999987642 3455554
Q ss_pred ccccCCCCCCHHHHHHHhhhhccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCH
Q 006275 497 QAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 576 (652)
Q Consensus 497 ~~~~~~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~ 576 (652)
..+++..|+.+|+..........++.++++.+++. +..++++.+|||||||||+|||||+.+|++|||||||++||+
T Consensus 90 --~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGqkqrl~laraL~~~p~lllLDEPt~~LD~ 166 (257)
T PRK11247 90 --ARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLA-DRANEWPAALSGGQKQRVALARALIHRPGLLLLDEPLGALDA 166 (257)
T ss_pred --ccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCCh-hHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCH
Confidence 34556689999998643221234678899999995 567899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCCh
Q 006275 577 PSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDY 625 (652)
Q Consensus 577 ~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~ 625 (652)
.++..+.+.|.++ +.|||+||||++++..+||+|++|++|++.. .++.
T Consensus 167 ~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~-~~~~ 218 (257)
T PRK11247 167 LTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGL-DLTV 218 (257)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe-eccc
Confidence 9999999988754 5699999999999999999999999999974 3443
No 172
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-41 Score=351.85 Aligned_cols=210 Identities=24% Similarity=0.389 Sum_probs=176.4
Q ss_pred CceEEEeEEEEeC-CeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC------------ce
Q 006275 96 SGVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------MK 162 (652)
Q Consensus 96 ~~i~v~~ls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------------~~ 162 (652)
++|+++|++++|+ ++++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ ..
T Consensus 4 ~~l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 4 YILKVEELNYNYSDGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred ceEEEEeEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 4699999999996 5679999999999999999999999999999999999999999999998743 24
Q ss_pred EEEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHH
Q 006275 163 IAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (652)
Q Consensus 163 i~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (652)
++|++|++. ..+..|++||+...... . .........++.+
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~--------------~-------------------------~~~~~~~~~~~~~ 124 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVN--------------L-------------------------KLPEDEVRKRVDN 124 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHH--------------c-------------------------CCCHHHHHHHHHH
Confidence 999999974 23567999998532100 0 0011122345667
Q ss_pred HhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHH
Q 006275 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRA 317 (652)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~ 317 (652)
+++.+|+. ...++++.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|++ .|.|||++||+++
T Consensus 125 ~l~~~gL~-~~~~~~~~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~ 203 (283)
T PRK13636 125 ALKRTGIE-HLKDKPTHCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID 203 (283)
T ss_pred HHHHCCCh-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH
Confidence 88889996 578899999999999999999999999999999999999999999988887642 4899999999999
Q ss_pred HHHhhcCeEEEEcCCeEEEecCChHHHHH
Q 006275 318 FLDQLCTKIVETEMGVSRTYEGNYSQYVL 346 (652)
Q Consensus 318 ~l~~~~d~ii~l~~G~~~~~~g~~~~~~~ 346 (652)
++..+|||+++|++|++ .+.|+++++..
T Consensus 204 ~~~~~~dri~~l~~G~i-~~~g~~~~~~~ 231 (283)
T PRK13636 204 IVPLYCDNVFVMKEGRV-ILQGNPKEVFA 231 (283)
T ss_pred HHHHhCCEEEEEECCEE-EEeCCHHHHhc
Confidence 99999999999999998 47788776543
No 173
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-41 Score=350.57 Aligned_cols=208 Identities=21% Similarity=0.291 Sum_probs=172.4
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC------------ceEE
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------MKIA 164 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------------~~i~ 164 (652)
+|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..|+
T Consensus 1 ml~~~~l~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i~ 80 (271)
T PRK13638 1 MLATSDLWFRYQDEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQVA 80 (271)
T ss_pred CeEEEEEEEEcCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhheE
Confidence 3789999999988889999999999999999999999999999999999999999999998743 2499
Q ss_pred EEeccCcc-CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHh
Q 006275 165 FLSQEFEV-SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (652)
Q Consensus 165 ~v~Q~~~~-~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (652)
|++|++.. .+..|+.+|+...... . .........++.+++
T Consensus 81 ~v~q~~~~~~~~~~~~~~l~~~~~~--------------~-------------------------~~~~~~~~~~~~~~l 121 (271)
T PRK13638 81 TVFQDPEQQIFYTDIDSDIAFSLRN--------------L-------------------------GVPEAEITRRVDEAL 121 (271)
T ss_pred EEeeChhhccccccHHHHHHHHHHH--------------c-------------------------CCCHHHHHHHHHHHH
Confidence 99999753 2445788887421100 0 000111233456678
Q ss_pred hhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHH
Q 006275 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLD 320 (652)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~ 320 (652)
+.+|+. +..++++.+||||||||++|||||+.+|++|||||||+|||+.++.++.++|++ .|.|||+||||++++.
T Consensus 122 ~~~~l~-~~~~~~~~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~ 200 (271)
T PRK13638 122 TLVDAQ-HFRHQPIQCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIY 200 (271)
T ss_pred HHcCCH-hHhcCCchhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 888885 567888999999999999999999999999999999999999999999888753 4889999999999999
Q ss_pred hhcCeEEEEcCCeEEEecCChHHHH
Q 006275 321 QLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 321 ~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
.+||++++|++|++. ..|+.+++.
T Consensus 201 ~~~d~i~~l~~G~i~-~~g~~~~~~ 224 (271)
T PRK13638 201 EISDAVYVLRQGQIL-THGAPGEVF 224 (271)
T ss_pred HhCCEEEEEECCEEE-EeCCHHHHh
Confidence 999999999999974 667766543
No 174
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=3e-41 Score=349.42 Aligned_cols=211 Identities=17% Similarity=0.378 Sum_probs=173.9
Q ss_pred CceEEEeEEEEeCC---------eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC------
Q 006275 96 SGVKLENISKSYKG---------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------ 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~---------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------ 160 (652)
++|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~ 82 (267)
T PRK15112 3 TLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDY 82 (267)
T ss_pred ceEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCch
Confidence 46999999999962 469999999999999999999999999999999999999999999998742
Q ss_pred ----ceEEEEeccCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhc
Q 006275 161 ----MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDT 234 (652)
Q Consensus 161 ----~~i~~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (652)
..++|++|++. +.+..|+.+++....... .......
T Consensus 83 ~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~--------------------------------------~~~~~~~ 124 (267)
T PRK15112 83 SYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLN--------------------------------------TDLEPEQ 124 (267)
T ss_pred hhHhccEEEEecCchhhcCcchhHHHHHHHHHHhc--------------------------------------cCCCHHH
Confidence 25999999974 445668888874211000 0001112
Q ss_pred HHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEE
Q 006275 235 LDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMV 310 (652)
Q Consensus 235 ~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvI 310 (652)
..+.+.++++.+|+.....++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|++ .|.|||
T Consensus 125 ~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvi 204 (267)
T PRK15112 125 REKQIIETLRQVGLLPDHASYYPHMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYI 204 (267)
T ss_pred HHHHHHHHHHHcCCChHHHhcCchhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEE
Confidence 2345667888999854567788899999999999999999999999999999999999999999888753 488999
Q ss_pred EEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 311 IISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 311 ivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
++||+++++..+||+|++|++|++. ..|+++++.
T Consensus 205 ivsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 238 (267)
T PRK15112 205 YVTQHLGMMKHISDQVLVMHQGEVV-ERGSTADVL 238 (267)
T ss_pred EEeCCHHHHHHhcCEEEEEECCEEE-ecCCHHHHh
Confidence 9999999999999999999999984 667766654
No 175
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-41 Score=363.57 Aligned_cols=203 Identities=29% Similarity=0.448 Sum_probs=177.7
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------cceecc
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQ 495 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~~ 495 (652)
.|+++|++++|+++.+|+++||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.++. .+|++|
T Consensus 3 ~l~i~~l~~~~~~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~v~Q 82 (369)
T PRK11000 3 SVTLRNVTKAYGDVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGMVFQ 82 (369)
T ss_pred EEEEEEEEEEeCCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEEEeC
Confidence 489999999999889999999999999999999999999999999999999999999999998752 235555
Q ss_pred cccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeC
Q 006275 496 NQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (652)
Q Consensus 496 ~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDE 569 (652)
+ ..+++.+|+.+|+.+.... ....++.++++.+++. +..++++.+|||||||||+|||||+.+|++|||||
T Consensus 83 ~--~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~~~~~~LSgGq~QRvaLAraL~~~P~lLLLDE 159 (369)
T PRK11000 83 S--YALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLA-HLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDE 159 (369)
T ss_pred C--cccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCCh-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 4 4577789999999875421 1124578899999995 67899999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 570 PTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 570 Pt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||++||+.+++.+.+.|+++ +.|+|+||||++++..+||++++|++|++.. .|++++...
T Consensus 160 Pts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~-~g~~~~i~~ 223 (369)
T PRK11000 160 PLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQ-VGKPLELYH 223 (369)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHHh
Confidence 99999999999999888754 5699999999999999999999999999974 577776543
No 176
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-41 Score=344.73 Aligned_cols=211 Identities=22% Similarity=0.290 Sum_probs=175.1
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCC-----CCcEEEECCCC----------c
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN----------M 161 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~i~~~~~~----------~ 161 (652)
.|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++| ++|+|.++|.+ .
T Consensus 3 ~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 82 (250)
T PRK14247 3 KIEIRDLKVSFGQVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRR 82 (250)
T ss_pred eEEEEeeEEEECCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhc
Confidence 58999999999988899999999999999999999999999999999999974 69999998742 2
Q ss_pred eEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHH
Q 006275 162 KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (652)
Q Consensus 162 ~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (652)
.|+|++|++.+++..|+.||+....... . .. ....+..+.+.+
T Consensus 83 ~i~~v~q~~~~~~~~tv~enl~~~~~~~-----------~-~~-------------------------~~~~~~~~~~~~ 125 (250)
T PRK14247 83 RVQMVFQIPNPIPNLSIFENVALGLKLN-----------R-LV-------------------------KSKKELQERVRW 125 (250)
T ss_pred cEEEEeccCccCCCCcHHHHHHHHHHhc-----------c-cc-------------------------CCHHHHHHHHHH
Confidence 5999999988778899999985321100 0 00 000112344567
Q ss_pred HhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCH
Q 006275 242 LMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDR 316 (652)
Q Consensus 242 ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~ 316 (652)
+++.+|+.. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .+.|||++||++
T Consensus 126 ~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~ 205 (250)
T PRK14247 126 ALEKAQLWDEVKDRLDAPAGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFP 205 (250)
T ss_pred HHHHcCCCcchhhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCH
Confidence 778888742 346888999999999999999999999999999999999999999999988753 378999999999
Q ss_pred HHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 317 AFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 317 ~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
+++..+||+|++|++|++ ...|+.+++.
T Consensus 206 ~~~~~~~d~i~~l~~G~i-~~~g~~~~~~ 233 (250)
T PRK14247 206 QQAARISDYVAFLYKGQI-VEWGPTREVF 233 (250)
T ss_pred HHHHHhcCEEEEEECCeE-EEECCHHHHH
Confidence 999999999999999997 4667766553
No 177
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=5.7e-41 Score=345.68 Aligned_cols=211 Identities=25% Similarity=0.389 Sum_probs=174.7
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------------
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------------- 160 (652)
++|+++|++++|+++++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+
T Consensus 5 ~~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~~ 84 (258)
T PRK11701 5 PLLSVRGLTKLYGPRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAERR 84 (258)
T ss_pred ceEEEeeeEEEcCCceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHHH
Confidence 36999999999988889999999999999999999999999999999999999999999998754
Q ss_pred ----ceEEEEeccCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhc
Q 006275 161 ----MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDT 234 (652)
Q Consensus 161 ----~~i~~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (652)
..++|++|++. +....|+.+|+...+.. .. ..+...
T Consensus 85 ~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~--------------~~------------------------~~~~~~ 126 (258)
T PRK11701 85 RLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMA--------------VG------------------------ARHYGD 126 (258)
T ss_pred HHhhcceEEEeeCcccccCccccHHHHHHHHHHH--------------hc------------------------cCcHHH
Confidence 14999999974 44566888887421100 00 000011
Q ss_pred HHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEE
Q 006275 235 LDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMV 310 (652)
Q Consensus 235 ~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvI 310 (652)
....+.++++.+|+.....++.+.+|||||||||+|||||+.+|+||||||||+|||+.+++++.+.|+ +.|.|||
T Consensus 127 ~~~~~~~~l~~~~l~~~~~~~~~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii 206 (258)
T PRK11701 127 IRATAGDWLERVEIDAARIDDLPTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVV 206 (258)
T ss_pred HHHHHHHHHHHcCCChhHHhCCCccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEE
Confidence 234456778888886446788899999999999999999999999999999999999999999988764 2488999
Q ss_pred EEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 311 IISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 311 ivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
++||+++++..+||+|+++++|++. +.|+.+++.
T Consensus 207 ~isH~~~~~~~~~d~i~~l~~g~i~-~~~~~~~~~ 240 (258)
T PRK11701 207 IVTHDLAVARLLAHRLLVMKQGRVV-ESGLTDQVL 240 (258)
T ss_pred EEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHHh
Confidence 9999999999999999999999984 667766543
No 178
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=3.3e-41 Score=342.73 Aligned_cols=202 Identities=30% Similarity=0.421 Sum_probs=173.7
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-----------ccee
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PNYF 493 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~~~ 493 (652)
|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v 80 (236)
T cd03219 1 LEVRGLTKRFGGLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIGRT 80 (236)
T ss_pred CeeeeeEEEECCEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEEEE
Confidence 46899999998888999999999999999999999999999999999999999999999997652 1234
Q ss_pred cccccccCCCCCCHHHHHHHhhhhc----------------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHH
Q 006275 494 EQNQAEALDLDKTVLETVAEAAEDW----------------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKF 557 (652)
Q Consensus 494 ~~~~~~~~~~~~tv~e~~~~~~~~~----------------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAra 557 (652)
+|+ ..+++..|+.+|+....... ....+.++++.+++. ...++++.+|||||||||+||||
T Consensus 81 ~q~--~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la~a 157 (236)
T cd03219 81 FQI--PRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLA-DLADRPAGELSYGQQRRLEIARA 157 (236)
T ss_pred ecc--cccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCcc-chhhCChhhCCHHHHHHHHHHHH
Confidence 443 34667789999997643211 123467889999995 56789999999999999999999
Q ss_pred HccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 558 MVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 558 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
|+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|++. ..|++++...
T Consensus 158 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 232 (236)
T cd03219 158 LATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVI-AEGTPDEVRN 232 (236)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEE-eecCHHHhcc
Confidence 99999999999999999999999999999865 469999999999999999999999999997 4577776543
No 179
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-41 Score=351.74 Aligned_cols=206 Identities=27% Similarity=0.343 Sum_probs=174.3
Q ss_pred EEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------------ceEE
Q 006275 99 KLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------MKIA 164 (652)
Q Consensus 99 ~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------------~~i~ 164 (652)
.++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++
T Consensus 26 ~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~ 105 (269)
T cd03294 26 SKEEILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKIS 105 (269)
T ss_pred hhhhhhhhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcEE
Confidence 56799999999999999999999999999999999999999999999999999999998732 2599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhh
Q 006275 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (652)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (652)
|++|++.+++..|+.||+...... . .........++.++++
T Consensus 106 ~v~q~~~~~~~~tv~e~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~ 146 (269)
T cd03294 106 MVFQSFALLPHRTVLENVAFGLEV---------------Q------------------------GVPRAEREERAAEALE 146 (269)
T ss_pred EEecCcccCCCCcHHHHHHHHHHh---------------c------------------------CCCHHHHHHHHHHHHH
Confidence 999999887788999998532100 0 0001112345667788
Q ss_pred hcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHH
Q 006275 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLD 320 (652)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~ 320 (652)
.+|+. +..++.+.+|||||||||+|||||+.+|++|||||||+|||+.+++.+.++|++ .|+|||++||+++++.
T Consensus 147 ~~~l~-~~~~~~~~~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~ 225 (269)
T cd03294 147 LVGLE-GWEHKYPDELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEAL 225 (269)
T ss_pred HcCCH-hHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH
Confidence 88986 567889999999999999999999999999999999999999999999887643 3799999999999999
Q ss_pred hhcCeEEEEcCCeEEEecCChHHHH
Q 006275 321 QLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 321 ~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
++||++++|++|++. ..|+.+++.
T Consensus 226 ~~~d~v~~l~~G~i~-~~g~~~~~~ 249 (269)
T cd03294 226 RLGDRIAIMKDGRLV-QVGTPEEIL 249 (269)
T ss_pred HhcCEEEEEECCEEE-EeCCHHHHH
Confidence 999999999999984 567665543
No 180
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=4.2e-41 Score=360.17 Aligned_cols=204 Identities=28% Similarity=0.427 Sum_probs=179.1
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------cceecc
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQ 495 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~~ 495 (652)
+|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|
T Consensus 2 ~L~i~~l~~~~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~v~Q 81 (353)
T PRK10851 2 SIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQ 81 (353)
T ss_pred EEEEEEEEEEeCCeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEEEec
Confidence 489999999999889999999999999999999999999999999999999999999999998762 235555
Q ss_pred cccccCCCCCCHHHHHHHhhhh------c----cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeE
Q 006275 496 NQAEALDLDKTVLETVAEAAED------W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (652)
Q Consensus 496 ~~~~~~~~~~tv~e~~~~~~~~------~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lL 565 (652)
+ ..+++.+|+.+|+.+.... . ...++.++++.+++. +..++++.+|||||||||+|||||+.+|++|
T Consensus 82 ~--~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgGq~QRvalArAL~~~P~ll 158 (353)
T PRK10851 82 H--YALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLA-HLADRYPAQLSGGQKQRVALARALAVEPQIL 158 (353)
T ss_pred C--cccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 4 4677889999999875321 1 124577899999995 6789999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 566 VLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 566 lLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
||||||++||+.++..+.+.|++. +.|+|+||||++++..+||||++|++|++.. .|+++++++.
T Consensus 159 LLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~-~g~~~~i~~~ 227 (353)
T PRK10851 159 LLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQ-AGTPDQVWRE 227 (353)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHHhC
Confidence 999999999999999999988754 4699999999999999999999999999974 5777776543
No 181
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-41 Score=344.57 Aligned_cols=210 Identities=19% Similarity=0.295 Sum_probs=171.2
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC-----CCCcEEEECCCC---------
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN--------- 160 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~i~~~~~~--------- 160 (652)
.+.|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++ |++|+|.++|.+
T Consensus 4 ~~~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 4 PPKMEARGLSFFYGDFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred CcEEEEeeeEEEECCeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 356999999999988889999999999999999999999999999999999964 589999998732
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHH
Q 006275 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (652)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (652)
..++|++|++.+++ .|+.||+...+... .. .......+
T Consensus 84 ~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---------------~~-----------------------~~~~~~~~ 124 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFP-KSIFENVAYGLRVN---------------GV-----------------------KDKAYLAE 124 (253)
T ss_pred HHhhcEEEEecCCCCCc-CcHHHHHHHHHHHc---------------CC-----------------------CCHHHHHH
Confidence 25999999987765 59999985321100 00 00001223
Q ss_pred HHHHHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 006275 238 KVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (652)
Q Consensus 238 ~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIiv 312 (652)
++.++++.+|+.. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .++|||++
T Consensus 125 ~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~ 204 (253)
T PRK14242 125 RVERSLRHAALWDEVKDRLHESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIV 204 (253)
T ss_pred HHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEE
Confidence 4555666777632 245778899999999999999999999999999999999999999999988753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 313 sHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
|||++++..+||+|++|++|++. ..|..+++
T Consensus 205 tH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~ 235 (253)
T PRK14242 205 THNMQQAARVSDVTAFFYMGKLI-EVGPTEQI 235 (253)
T ss_pred EecHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 99999999999999999999984 56766554
No 182
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-41 Score=338.27 Aligned_cols=193 Identities=33% Similarity=0.472 Sum_probs=168.3
Q ss_pred EEEEeeeeEeCC----eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-----cceecc
Q 006275 425 VTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----PNYFEQ 495 (652)
Q Consensus 425 i~~~~v~~~y~~----~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----~~~~~~ 495 (652)
|+++|+++.|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 478999999987 78999999999999999999999999999999999999999999999998752 245555
Q ss_pred cccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeC
Q 006275 496 NQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (652)
Q Consensus 496 ~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDE 569 (652)
. ..+++..|+.+|+...... ...+.+.++++.+++. +..++++.+||||||||++|||||+.+|++|||||
T Consensus 81 ~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLDE 157 (220)
T cd03293 81 Q--DALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLS-GFENAYPHQLSGGMRQRVALARALAVDPDVLLLDE 157 (220)
T ss_pred c--cccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEECC
Confidence 4 3455678999999764321 1134577899999995 56789999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEe--CCEEEe
Q 006275 570 PTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVK--GSNLQD 620 (652)
Q Consensus 570 Pt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~--~g~i~~ 620 (652)
||++||+.++..+.++|+++ +.|||+||||++++..+||++++|+ +|++.+
T Consensus 158 Pt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~ 214 (220)
T cd03293 158 PFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVA 214 (220)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEE
Confidence 99999999999999999764 4699999999999999999999999 799864
No 183
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2.9e-41 Score=344.72 Aligned_cols=201 Identities=28% Similarity=0.402 Sum_probs=172.9
Q ss_pred EEEEEeeeeEeC-CeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-------------
Q 006275 424 VVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~-~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------- 489 (652)
+|+++||+++|+ ++++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 ~l~~~~l~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 1 MLEVENLSKVYPNGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred CeEEEeeeeecCCCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 478999999998 778999999999999999999999999999999999999999999999997652
Q ss_pred cceecccccccCCCCCCHHHHHHHhhh--------------hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHH
Q 006275 490 PNYFEQNQAEALDLDKTVLETVAEAAE--------------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFC 555 (652)
Q Consensus 490 ~~~~~~~~~~~~~~~~tv~e~~~~~~~--------------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LA 555 (652)
.+|++|+ ..+++..|+.+|+..... .....++.++++.+++. ...++++.+|||||||||+||
T Consensus 81 i~~v~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la 157 (243)
T TIGR02315 81 IGMIFQH--YNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLA-DKAYQRADQLSGGQQQRVAIA 157 (243)
T ss_pred eEEEcCC--CcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcH-hhhcCCcccCCHHHHHHHHHH
Confidence 1344443 345667899999975321 11234577889999994 667899999999999999999
Q ss_pred HHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhH
Q 006275 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVC 628 (652)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~ 628 (652)
|||+.+|++|||||||++||+.++..+.+.|++. +.|||+||||++++.++||++++|++|++. ..|++++.
T Consensus 158 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~ 233 (243)
T TIGR02315 158 RALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIV-FDGAPSEL 233 (243)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEE-ecCCHHHh
Confidence 9999999999999999999999999999999764 459999999999999999999999999997 45776654
No 184
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-41 Score=346.21 Aligned_cols=222 Identities=20% Similarity=0.370 Sum_probs=177.0
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------ceEEE
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAF 165 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----------~~i~~ 165 (652)
+|+++|+++.|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|
T Consensus 5 ~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 84 (255)
T PRK11300 5 LLSVSGLMMRFGGLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGVVR 84 (255)
T ss_pred eEEEeeEEEEECCEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCeEE
Confidence 5999999999998889999999999999999999999999999999999999999999998742 24899
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh
Q 006275 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (652)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (652)
++|++.+++..|+.||+......... ......+... +.. .....+....+.++++.
T Consensus 85 ~~q~~~~~~~~tv~enl~~~~~~~~~-----~~~~~~~~~~----~~~---------------~~~~~~~~~~~~~~l~~ 140 (255)
T PRK11300 85 TFQHVRLFREMTVIENLLVAQHQQLK-----TGLFSGLLKT----PAF---------------RRAESEALDRAATWLER 140 (255)
T ss_pred eccCcccCCCCcHHHHHHHhhhcccc-----chhhhhhccc----ccc---------------ccchhHHHHHHHHHHHh
Confidence 99999888888999998632110000 0000000000 000 00000122456677888
Q ss_pred cCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---c-CCCeEEEEecCHHHHHh
Q 006275 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---K-QDVPMVIISHDRAFLDQ 321 (652)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~-~g~tvIivsHd~~~l~~ 321 (652)
+|+. +..++++.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|+ + .++|||++||+++++.+
T Consensus 141 ~gl~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~ 219 (255)
T PRK11300 141 VGLL-EHANRQAGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMG 219 (255)
T ss_pred CChh-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHH
Confidence 8985 56789999999999999999999999999999999999999999999988874 3 38899999999999999
Q ss_pred hcCeEEEEcCCeEEEecCChHHH
Q 006275 322 LCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 322 ~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
+||+++++++|++. +.|+.+++
T Consensus 220 ~~d~i~~l~~g~i~-~~~~~~~~ 241 (255)
T PRK11300 220 ISDRIYVVNQGTPL-ANGTPEEI 241 (255)
T ss_pred hCCEEEEEECCeEE-ecCCHHHH
Confidence 99999999999984 66765554
No 185
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.9e-41 Score=341.91 Aligned_cols=204 Identities=23% Similarity=0.332 Sum_probs=168.0
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------ceEEEE
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAFL 166 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----------~~i~~v 166 (652)
|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~ 80 (230)
T TIGR03410 1 LEVSNLNVYYGQSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIAYV 80 (230)
T ss_pred CEEEeEEEEeCCeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeEEe
Confidence 578999999998889999999999999999999999999999999999999999999998632 259999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhc
Q 006275 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (652)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (652)
+|++.+++..|+.+|+...+... .. .....+.++++.+
T Consensus 81 ~q~~~~~~~~tv~~~l~~~~~~~-~~-----------------------------------------~~~~~~~~~l~~~ 118 (230)
T TIGR03410 81 PQGREIFPRLTVEENLLTGLAAL-PR-----------------------------------------RSRKIPDEIYELF 118 (230)
T ss_pred ccCCcccCCCcHHHHHHHHHHhc-Cc-----------------------------------------chHHHHHHHHHHH
Confidence 99998877789999985322100 00 0001122334444
Q ss_pred CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhh
Q 006275 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQL 322 (652)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~ 322 (652)
+......++++.+||||||||++|||||+.+|++|||||||+|||+.++.++.++|++ .++|||++||+++++..+
T Consensus 119 ~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~ 198 (230)
T TIGR03410 119 PVLKEMLGRRGGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFAREL 198 (230)
T ss_pred HhHHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHh
Confidence 3212456788999999999999999999999999999999999999999999988753 478999999999999999
Q ss_pred cCeEEEEcCCeEEEecCChHHH
Q 006275 323 CTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 323 ~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
||+|+++++|++. ..|+.+++
T Consensus 199 ~d~v~~l~~g~i~-~~~~~~~~ 219 (230)
T TIGR03410 199 ADRYYVMERGRVV-ASGAGDEL 219 (230)
T ss_pred CCEEEEEECCEEE-EECCHHHc
Confidence 9999999999984 66765553
No 186
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=5.9e-41 Score=347.61 Aligned_cols=205 Identities=29% Similarity=0.377 Sum_probs=176.4
Q ss_pred CcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc------------
Q 006275 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------ 489 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------ 489 (652)
..+|+++||+++|+++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 5 ~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 5 ANLVDMRGVSFTRGNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred cceEEEeCeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 34799999999999889999999999999999999999999999999999999999999999997652
Q ss_pred -cceecccccccCCCCCCHHHHHHHhhhh---cc----HHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccC
Q 006275 490 -PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKP 561 (652)
Q Consensus 490 -~~~~~~~~~~~~~~~~tv~e~~~~~~~~---~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~ 561 (652)
.+|++|+ ..+++..|+.+|+...... .. ...+.++++.+++. +..++++.+|||||||||+|||||+.+
T Consensus 85 ~i~~v~q~--~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGq~qrv~laral~~~ 161 (269)
T PRK11831 85 RMSMLFQS--GALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLR-GAAKLMPSELSGGMARRAALARAIALE 161 (269)
T ss_pred cEEEEecc--cccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 1244443 3456678999999764211 11 23466789999995 677999999999999999999999999
Q ss_pred CCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 562 STLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 562 p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
|++|||||||++||+.+++.+.++|+++ +.|||+||||++++..+||++++|++|++. +.|+.+++.+
T Consensus 162 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~~ 233 (269)
T PRK11831 162 PDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIV-AHGSAQALQA 233 (269)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEE-EeCCHHHHhc
Confidence 9999999999999999999999999865 469999999999999999999999999997 4577777654
No 187
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-41 Score=342.46 Aligned_cols=207 Identities=23% Similarity=0.332 Sum_probs=169.5
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------ceEE
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIA 164 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----------~~i~ 164 (652)
.+|+++|++++|+++++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.. ..++
T Consensus 4 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 83 (237)
T PRK11614 4 VMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAVA 83 (237)
T ss_pred cEEEEEeEEEeeCCceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCEE
Confidence 36999999999988889999999999999999999999999999999999999999999998742 2499
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhh
Q 006275 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (652)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (652)
|++|++.+++..||.+|+....... . . ......+.++++
T Consensus 84 ~~~q~~~~~~~~tv~~~l~~~~~~~-~-~---------------------------------------~~~~~~~~~~l~ 122 (237)
T PRK11614 84 IVPEGRRVFSRMTVEENLAMGGFFA-E-R---------------------------------------DQFQERIKWVYE 122 (237)
T ss_pred EeccCcccCCCCcHHHHHHHhhhcc-C-h---------------------------------------hHHHHHHHHHHH
Confidence 9999988777789999985321000 0 0 000111223333
Q ss_pred hc-CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHH
Q 006275 245 EL-GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLD 320 (652)
Q Consensus 245 ~l-gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~ 320 (652)
.+ ++. +..++++.+||||||||++|||||+.+|+||||||||+|||+.+++.+.++|+ +.|.|||++||+++++.
T Consensus 123 ~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~ 201 (237)
T PRK11614 123 LFPRLH-ERRIQRAGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQAL 201 (237)
T ss_pred HHHHHH-HHHhCchhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHH
Confidence 33 232 34566789999999999999999999999999999999999999999988764 35899999999999999
Q ss_pred hhcCeEEEEcCCeEEEecCChHHHH
Q 006275 321 QLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 321 ~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
++||+++++++|++ .+.|+.++..
T Consensus 202 ~~~d~i~~l~~G~i-~~~~~~~~~~ 225 (237)
T PRK11614 202 KLADRGYVLENGHV-VLEDTGDALL 225 (237)
T ss_pred hhCCEEEEEeCCEE-EeeCCHHHHh
Confidence 99999999999998 4678766553
No 188
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=7.8e-42 Score=318.66 Aligned_cols=207 Identities=24% Similarity=0.383 Sum_probs=176.0
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------ceEEEEecc
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------~~i~~v~Q~ 169 (652)
|.+.+|.++|+..+. ..+++|++||++||+||+||||||||++|+|+..|.+|+|.++|.+ .-+++++|+
T Consensus 2 l~L~~V~~~y~~~~~--~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSmlFQE 79 (231)
T COG3840 2 LALDDVRFSYGHLPM--RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSMLFQE 79 (231)
T ss_pred ccccceEEeeCcceE--EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhhhhc
Confidence 678999999987652 4678999999999999999999999999999999999999999864 249999999
Q ss_pred CccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCC
Q 006275 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (652)
Q Consensus 170 ~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (652)
.+++..+||.+|+..+....... + .+-.+++...+..+|+.
T Consensus 80 nNLFaHLtV~qNigLGl~P~LkL--------------------------------------~-a~~r~~v~~aa~~vGl~ 120 (231)
T COG3840 80 NNLFAHLTVAQNIGLGLSPGLKL--------------------------------------N-AEQREKVEAAAAQVGLA 120 (231)
T ss_pred cccchhhhhhhhhcccCCccccc--------------------------------------C-HHHHHHHHHHHHHhChh
Confidence 99999999999986433221000 0 01234566778888986
Q ss_pred cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHhhcCe
Q 006275 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQLCTK 325 (652)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L----~~~g~tvIivsHd~~~l~~~~d~ 325 (652)
...+|.+.+|||||||||+|||+|+.+-+|||||||||+|||.-+.++..++ .+.+.|+++|||.++.+.+++++
T Consensus 121 -~~~~RLP~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~ 199 (231)
T COG3840 121 -GFLKRLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADR 199 (231)
T ss_pred -hHhhhCccccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhc
Confidence 6789999999999999999999999999999999999999999998887765 35789999999999999999999
Q ss_pred EEEEcCCeEEEecCChHHHHHH
Q 006275 326 IVETEMGVSRTYEGNYSQYVLE 347 (652)
Q Consensus 326 ii~l~~G~~~~~~g~~~~~~~~ 347 (652)
++++++|++ .+.|...+++..
T Consensus 200 ~~fl~~Gri-~~~g~~~~~~~~ 220 (231)
T COG3840 200 VVFLDNGRI-AAQGSTQELLSG 220 (231)
T ss_pred eEEEeCCEE-EeeccHHHHhcc
Confidence 999999998 588877766543
No 189
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.6e-41 Score=316.59 Aligned_cols=203 Identities=28% Similarity=0.454 Sum_probs=176.2
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceeccc--------ceecc
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP--------NYFEQ 495 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~--------~~~~~ 495 (652)
+|.+++|.++|+..+. .++++|+.||++||+||+||||||||++|+|+..|.+|.|+++|.+... ..++
T Consensus 1 ~l~L~~V~~~y~~~~~--~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSmlF- 77 (231)
T COG3840 1 MLALDDVRFSYGHLPM--RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSMLF- 77 (231)
T ss_pred CccccceEEeeCcceE--EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhhh-
Confidence 3678899999976543 5789999999999999999999999999999999999999999988631 1222
Q ss_pred cccccCCCCCCHHHHHHHhhh------hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeC
Q 006275 496 NQAEALDLDKTVLETVAEAAE------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (652)
Q Consensus 496 ~~~~~~~~~~tv~e~~~~~~~------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDE 569 (652)
|+.+++..+||.+|+..+.. ....+.+..++.++|+ ..+.++.|.+|||||||||+|||+|+++-+||+|||
T Consensus 78 -QEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl-~~~~~RLP~~LSGGqRQRvALARclvR~~PilLLDE 155 (231)
T COG3840 78 -QENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGL-AGFLKRLPGELSGGQRQRVALARCLVREQPILLLDE 155 (231)
T ss_pred -hccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhCh-hhHhhhCccccCchHHHHHHHHHHHhccCCeEEecC
Confidence 45678999999999988643 2234568889999999 578899999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhhc
Q 006275 570 PTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTSF 632 (652)
Q Consensus 570 Pt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~~ 632 (652)
|+++|||.-+..|..++.+. +.|++||||..+.+.++++|++++++|+|. +.|..++.+...
T Consensus 156 PFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~-~~g~~~~~~~~~ 221 (231)
T COG3840 156 PFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIA-AQGSTQELLSGK 221 (231)
T ss_pred chhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEE-eeccHHHHhccC
Confidence 99999999999999988755 459999999999999999999999999997 678888766543
No 190
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-41 Score=342.70 Aligned_cols=200 Identities=27% Similarity=0.389 Sum_probs=172.0
Q ss_pred EEEEeeeeEeCC-eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-------------c
Q 006275 425 VTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------------P 490 (652)
Q Consensus 425 i~~~~v~~~y~~-~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------------~ 490 (652)
++++||+++|++ +.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 1 l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 80 (241)
T cd03256 1 IEVENLSKTYPNGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQI 80 (241)
T ss_pred CEEeeEEEecCCccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhcc
Confidence 478999999987 78999999999999999999999999999999999999999999999997652 1
Q ss_pred ceecccccccCCCCCCHHHHHHHhhh--------------hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHH
Q 006275 491 NYFEQNQAEALDLDKTVLETVAEAAE--------------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCK 556 (652)
Q Consensus 491 ~~~~~~~~~~~~~~~tv~e~~~~~~~--------------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAr 556 (652)
+|++|+ ..+++..|+.+|+..... ....+.+.++++.+++. ...++++.+|||||||||+|||
T Consensus 81 ~~~~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~ 157 (241)
T cd03256 81 GMIFQQ--FNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLL-DKAYQRADQLSGGQQQRVAIAR 157 (241)
T ss_pred EEEccc--CcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCCh-hhhCCCcccCCHHHHHHHHHHH
Confidence 244443 345667899999975321 11234567889999994 6678999999999999999999
Q ss_pred HHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhH
Q 006275 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVC 628 (652)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~ 628 (652)
||+.+|+||||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|++.. .|+++++
T Consensus 158 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~ 232 (241)
T cd03256 158 ALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVF-DGPPAEL 232 (241)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe-ecCHHHh
Confidence 999999999999999999999999999999764 4699999999999999999999999999974 5777664
No 191
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=7.5e-41 Score=352.11 Aligned_cols=203 Identities=23% Similarity=0.367 Sum_probs=178.8
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------cceec
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYFE 494 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~~~~ 494 (652)
.++++|++++|+++.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+|++
T Consensus 2 ~l~~~~l~~~~~~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig~~~ 81 (301)
T TIGR03522 2 SIRVSSLTKLYGTQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIGYLP 81 (301)
T ss_pred EEEEEEEEEEECCEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceEEec
Confidence 489999999999889999999999999999999999999999999999999999999999998752 24555
Q ss_pred ccccccCCCCCCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEe
Q 006275 495 QNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLD 568 (652)
Q Consensus 495 ~~~~~~~~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLD 568 (652)
|. ..+++.+|+.||+.+..... ...++.++++.+|+. +..++++..|||||||||+|||||+.+|++||||
T Consensus 82 q~--~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~la~al~~~p~lliLD 158 (301)
T TIGR03522 82 EH--NPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLR-PEQHKKIGQLSKGYRQRVGLAQALIHDPKVLILD 158 (301)
T ss_pred CC--CCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCc-hHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 44 35677889999997643211 134578899999995 5679999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 569 EPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 569 EPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
|||+|||+.+++.+.+.|+++ +.|||++||+++++.++||||++|++|++. +.|+.+++..
T Consensus 159 EPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 221 (301)
T TIGR03522 159 EPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIV-ADKKLDELSA 221 (301)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHH
Confidence 999999999999999999876 469999999999999999999999999997 5688887654
No 192
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=4.5e-41 Score=363.91 Aligned_cols=203 Identities=25% Similarity=0.429 Sum_probs=177.9
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------cce
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNY 492 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~ 492 (652)
++|+++|++++|+++.+|+++||+|++||+++|+||||||||||||+|+|+++|++|+|.++|.++. .++
T Consensus 2 ~~L~~~nls~~y~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig~ 81 (402)
T PRK09536 2 PMIDVSDLSVEFGDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVAS 81 (402)
T ss_pred ceEEEeeEEEEECCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceEE
Confidence 3699999999999999999999999999999999999999999999999999999999999998753 134
Q ss_pred ecccccccCCCCCCHHHHHHHhhh----------hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCC
Q 006275 493 FEQNQAEALDLDKTVLETVAEAAE----------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPS 562 (652)
Q Consensus 493 ~~~~~~~~~~~~~tv~e~~~~~~~----------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p 562 (652)
+.|. ..+++.+|+.+|+..... ....+.+.++++.+++. +..++++.+||||||||++|||||+++|
T Consensus 82 v~q~--~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~-~~~~~~~~~LSgGerQRv~IArAL~~~P 158 (402)
T PRK09536 82 VPQD--TSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVA-QFADRPVTSLSGGERQRVLLARALAQAT 158 (402)
T ss_pred EccC--CCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHHcCC
Confidence 4443 456678999999976421 11234578899999994 6789999999999999999999999999
Q ss_pred CeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 563 TLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 563 ~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
+||||||||+|||+.++..+.++|+++ +.|||++|||++++.++|||+++|++|++. ..|++++++
T Consensus 159 ~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv-~~G~~~ev~ 227 (402)
T PRK09536 159 PVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVR-AAGPPADVL 227 (402)
T ss_pred CEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEE-EecCHHHHh
Confidence 999999999999999999999998865 459999999999999999999999999997 468887654
No 193
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=4.6e-41 Score=337.56 Aligned_cols=194 Identities=26% Similarity=0.401 Sum_probs=169.5
Q ss_pred EEEEEeeeeEeCCe----eeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------c
Q 006275 424 VVTIKNLEFGYEDR----LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------P 490 (652)
Q Consensus 424 ~i~~~~v~~~y~~~----~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~ 490 (652)
+|+++|++++|+++ ++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 1 ~l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i 80 (218)
T cd03266 1 MITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRL 80 (218)
T ss_pred CeEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhE
Confidence 47899999999876 7999999999999999999999999999999999999999999999997653 1
Q ss_pred ceecccccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCe
Q 006275 491 NYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (652)
Q Consensus 491 ~~~~~~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~l 564 (652)
+|++|. ..+++..|+.+|+...... .....+.++++.+++. +..++++.+||||||||++|||||+.+|++
T Consensus 81 ~~~~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~i 157 (218)
T cd03266 81 GFVSDS--TGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGME-ELLDRRVGGFSTGMRQKVAIARALVHDPPV 157 (218)
T ss_pred EEecCC--cccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-HHHhhhhhhcCHHHHHHHHHHHHHhcCCCE
Confidence 344443 3456678999999764321 1134577899999994 678999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEe
Q 006275 565 LVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (652)
Q Consensus 565 LlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~ 620 (652)
|||||||++||+.+++.+.++|+++ +.|||+||||++++..+||++++|++|++..
T Consensus 158 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~ 216 (218)
T cd03266 158 LLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVY 216 (218)
T ss_pred EEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEee
Confidence 9999999999999999999999865 4699999999999999999999999999863
No 194
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=5.3e-41 Score=359.94 Aligned_cols=204 Identities=26% Similarity=0.401 Sum_probs=179.0
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCe--eEEEECceecc--------ccee
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRG--GEVLLGEHNVL--------PNYF 493 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~--G~i~~~g~~~~--------~~~~ 493 (652)
.|+++||+++|+++.+|+++||+|++||+++|+|||||||||||++|+|+++|++ |+|.++|.++. .+++
T Consensus 5 ~l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ig~v 84 (362)
T TIGR03258 5 GIRIDHLRVAYGANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRGLALL 84 (362)
T ss_pred EEEEEEEEEEECCeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCCEEEE
Confidence 4899999999998889999999999999999999999999999999999999999 99999998752 2355
Q ss_pred cccccccCCCCCCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEE
Q 006275 494 EQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (652)
Q Consensus 494 ~~~~~~~~~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlL 567 (652)
+|+ ..+++.+||.+|+.+..... ....+.++++.+++. +..++++.+|||||||||+|||||+.+|++|||
T Consensus 85 fQ~--~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~-~~~~~~~~~LSgGq~QRvaLARAL~~~P~llLL 161 (362)
T TIGR03258 85 FQN--YALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLG-DAAAHLPAQLSGGMQQRIAIARAIAIEPDVLLL 161 (362)
T ss_pred ECC--cccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCC-chhhCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 554 45788999999998764321 123577899999995 678999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc-----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 568 DEPTNHLDIPSKEMLEEAISEY-----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 568 DEPt~~LD~~~~~~l~~~l~~~-----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
||||++||+.++..+.+.|++. +.|+|+||||++++..+||||++|++|++.. .|+++++.+.
T Consensus 162 DEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~-~g~~~~~~~~ 229 (362)
T TIGR03258 162 DEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAA-HGEPQALYDA 229 (362)
T ss_pred cCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHHhC
Confidence 9999999999999999988643 4699999999999999999999999999974 5877776543
No 195
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-41 Score=349.58 Aligned_cols=207 Identities=24% Similarity=0.386 Sum_probs=173.7
Q ss_pred ceEEEeEEEEeCC---eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceE
Q 006275 97 GVKLENISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKI 163 (652)
Q Consensus 97 ~i~v~~ls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i 163 (652)
+|+++|++++|++ .++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 5899999999964 359999999999999999999999999999999999999999999998743 259
Q ss_pred EEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHH
Q 006275 164 AFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (652)
Q Consensus 164 ~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (652)
+|++|+|. .++..||++|+...... ...+.....+++.++
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~---------------------------------------~~~~~~~~~~~~~~~ 124 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLEN---------------------------------------KGIPHEEMKERVNEA 124 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHh---------------------------------------CCCCHHHHHHHHHHH
Confidence 99999984 55678999998522100 001111233456678
Q ss_pred hhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---c-CCCeEEEEecCHHH
Q 006275 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---K-QDVPMVIISHDRAF 318 (652)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~-~g~tvIivsHd~~~ 318 (652)
++.+|+. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.++..+.++|+ + .|+|||+||||+++
T Consensus 125 l~~~gL~-~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~ 203 (279)
T PRK13650 125 LELVGMQ-DFKEREPARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDE 203 (279)
T ss_pred HHHCCCH-hHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH
Confidence 8889996 57789999999999999999999999999999999999999999999988764 2 48999999999999
Q ss_pred HHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 319 LDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 319 l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
+ .+||+|+++++|++. ..|+.+++.
T Consensus 204 ~-~~~dri~~l~~G~i~-~~g~~~~~~ 228 (279)
T PRK13650 204 V-ALSDRVLVMKNGQVE-STSTPRELF 228 (279)
T ss_pred H-HhCCEEEEEECCEEE-EECCHHHHH
Confidence 9 589999999999974 567766553
No 196
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=5.4e-41 Score=335.89 Aligned_cols=193 Identities=27% Similarity=0.470 Sum_probs=168.5
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------cceeccc
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQN 496 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~~~ 496 (652)
|+++|++++|+++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|.
T Consensus 1 i~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~~q~ 80 (213)
T cd03301 1 VELENVTKRFGNVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMVFQN 80 (213)
T ss_pred CEEEeeEEEECCeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEEecC
Confidence 47899999999889999999999999999999999999999999999999999999999998752 2344443
Q ss_pred ccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCC
Q 006275 497 QAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (652)
Q Consensus 497 ~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEP 570 (652)
..+++..|+.+|+...... .....+.++++.+++. +..++++.+||||||||++|||||+.+|++||||||
T Consensus 81 --~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qr~~laral~~~p~llllDEP 157 (213)
T cd03301 81 --YALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIE-HLLDRKPKQLSGGQRQRVALGRAIVREPKVFLMDEP 157 (213)
T ss_pred --hhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCH-HHHhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3455678999999764221 1123467889999994 677999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEe
Q 006275 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (652)
Q Consensus 571 t~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~ 620 (652)
|+|||+.+++.+.+.|+++ +.|||+||||++++.++||++++|++|+++.
T Consensus 158 t~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~ 211 (213)
T cd03301 158 LSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQ 211 (213)
T ss_pred cccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEe
Confidence 9999999999999999764 4699999999999999999999999999874
No 197
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-41 Score=344.51 Aligned_cols=208 Identities=22% Similarity=0.290 Sum_probs=171.6
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCC-----CCcEEEECCCC----------
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN---------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~i~~~~~~---------- 160 (652)
++|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|..
T Consensus 11 ~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 90 (258)
T PRK14268 11 PQIKVENLNLWYGEKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVE 90 (258)
T ss_pred eeEEEeeeEEEeCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHH
Confidence 469999999999888899999999999999999999999999999999999985 79999987632
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
..++|++|++.++. .|++||+...... . .........+
T Consensus 91 ~~~~i~~v~q~~~~~~-~tv~enl~~~~~~---------------~------------------------~~~~~~~~~~ 130 (258)
T PRK14268 91 LRKNVGMVFQKPNPFP-MSIYDNVAYGPRI---------------H------------------------GANKKDLDGV 130 (258)
T ss_pred HhhhEEEEecCCccCc-ccHHHHHHHHHHH---------------c------------------------CCCHHHHHHH
Confidence 24999999987765 8999998532100 0 0000112234
Q ss_pred HHHHhhhcCCC---cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006275 239 VSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (652)
Q Consensus 239 i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (652)
+.++++.+|+. ....++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .++|||+||
T Consensus 131 ~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivs 210 (258)
T PRK14268 131 VENALRSAALWDETSDRLKSPALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVT 210 (258)
T ss_pred HHHHHHHcCCCcchhhhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEE
Confidence 55667777763 2346788999999999999999999999999999999999999999999988753 378999999
Q ss_pred cCHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
||++++.++||+|++|++|++. +.|..+++
T Consensus 211 H~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 240 (258)
T PRK14268 211 HNMQQAARISDYTGFFLMGELI-EFGQTRQI 240 (258)
T ss_pred CCHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 9999999999999999999984 66766554
No 198
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-41 Score=350.09 Aligned_cols=207 Identities=22% Similarity=0.313 Sum_probs=171.3
Q ss_pred eEEEeEEEEeCC-----eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC------------
Q 006275 98 VKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------ 160 (652)
Q Consensus 98 i~v~~ls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------------ 160 (652)
|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 899999999974 369999999999999999999999999999999999999999999998742
Q ss_pred --ceEEEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHH
Q 006275 161 --MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (652)
Q Consensus 161 --~~i~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (652)
..|+|++|++. ..+..|+++|+...... . .........
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~---------------~------------------------~~~~~~~~~ 123 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQN---------------F------------------------GVSQEEAEA 123 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHH---------------c------------------------CCCHHHHHH
Confidence 24999999972 22456999998521100 0 000112233
Q ss_pred HHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEec
Q 006275 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISH 314 (652)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsH 314 (652)
++.++++.+|+.....++++.+||||||||++|||||+.+|++|||||||++||+.+++.+.++|++ .++|||+|||
T Consensus 124 ~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH 203 (280)
T PRK13649 124 LAREKLALVGISESLFEKNPFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTH 203 (280)
T ss_pred HHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 4567788888864467888999999999999999999999999999999999999999999888743 4889999999
Q ss_pred CHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 315 d~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
+++++..+||++++|++|++. +.|+.+++
T Consensus 204 ~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 232 (280)
T PRK13649 204 LMDDVANYADFVYVLEKGKLV-LSGKPKDI 232 (280)
T ss_pred cHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 999999999999999999974 55766554
No 199
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.3e-41 Score=375.21 Aligned_cols=249 Identities=22% Similarity=0.374 Sum_probs=186.8
Q ss_pred HHHHhhhhhHHhhhccCccccccccccccCCCCCCCCCCCceEEEeEEEEeCCe---eeeeeeeEEEECCCEEEEECCCC
Q 006275 57 KSIAKAQSDVESLFSSSADEFENKKYSNKQSNTGASSISSGVKLENISKSYKGV---TVLKDVTWEVKKGEKVGLVGVNG 133 (652)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~ls~~y~~~---~vL~~vsl~i~~Ge~~~lvG~NG 133 (652)
..+.++..+.+++|+.-++.+..... . ..... .....|+++||+|+|+.+ ++|+|+||+|++||++|||||||
T Consensus 429 s~lmkgvGAs~rvFel~dr~P~i~~~-G--~~~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSG 504 (716)
T KOG0058|consen 429 SELMKGVGASERVFELMDRKPRIPLT-G--TLAPD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSG 504 (716)
T ss_pred HHHHHhcchHHHHHHHhccCCCCCCC-C--ccccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCC
Confidence 44555556667777665554322222 1 11111 245679999999999876 49999999999999999999999
Q ss_pred ccHHHHHHHHHcCCCCCCcEEEECCCCc----------eEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 006275 134 AGKTTQLRIIAGQEEPDSGNVIKAKSNM----------KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKAL 203 (652)
Q Consensus 134 sGKSTLl~~L~G~~~p~~G~i~~~~~~~----------~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~ 203 (652)
+||||+.++|..+|+|++|+|.++|.++ +||+|.|+|.+ ++.||+|||..+..+. . .++++.+-
T Consensus 505 sGKSTiasLL~rfY~PtsG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvL-Fs~sI~eNI~YG~~~~-t----~e~i~~AA 578 (716)
T KOG0058|consen 505 SGKSTIASLLLRFYDPTSGRILLDGVPISDINHKYLRRKIGLVGQEPVL-FSGSIRENIAYGLDNA-T----DEEIEAAA 578 (716)
T ss_pred CCHHHHHHHHHHhcCCCCCeEEECCeehhhcCHHHHHHHeeeeecccee-ecccHHHHHhcCCCCC-C----HHHHHHHH
Confidence 9999999999999999999999999753 69999999977 8899999998654421 0 01111111
Q ss_pred hhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEE
Q 006275 204 ESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLL 283 (652)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLL 283 (652)
+.+ ...+++..+.+ |..+..+ ....+||||||||+||||||++||.||||
T Consensus 579 k~A-Nah~FI~~~p~----------------------------gY~T~VG-EkG~qLSGGQKQRIAIARALlr~P~VLIL 628 (716)
T KOG0058|consen 579 KMA-NAHEFITNFPD----------------------------GYNTVVG-EKGSQLSGGQKQRIAIARALLRNPRVLIL 628 (716)
T ss_pred HHh-ChHHHHHhCcc----------------------------ccccccC-CccccccchHHHHHHHHHHHhcCCCEEEE
Confidence 100 11122221111 2222233 33689999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHHHH
Q 006275 284 DEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLE 347 (652)
Q Consensus 284 DEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~~~ 347 (652)
||.||+||.++...+.+.|.+ .+.|||+|.|++..+. -||+|+++++|++ ...|++++++..
T Consensus 629 DEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~-~Ad~Ivvi~~G~V-~E~G~h~eLl~~ 692 (716)
T KOG0058|consen 629 DEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVR-HADQIVVIDKGRV-VEMGTHDELLSK 692 (716)
T ss_pred echhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhh-hccEEEEEcCCeE-EecccHHHHhhC
Confidence 999999999999999888853 4799999999999995 5999999999998 578888887654
No 200
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-41 Score=345.14 Aligned_cols=211 Identities=26% Similarity=0.342 Sum_probs=175.3
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEEEE
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~~v 166 (652)
+|+++|++++|+++++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 2 ~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 81 (255)
T PRK11231 2 TLRTENLTVGYGTKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLALL 81 (255)
T ss_pred EEEEEeEEEEECCEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEEe
Confidence 4899999999998889999999999999999999999999999999999999999999998743 249999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhc
Q 006275 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (652)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (652)
+|++.+++..|+.||+........ ..+. ........++.++++.+
T Consensus 82 ~q~~~~~~~~tv~~~i~~~~~~~~----------~~~~-------------------------~~~~~~~~~~~~~l~~~ 126 (255)
T PRK11231 82 PQHHLTPEGITVRELVAYGRSPWL----------SLWG-------------------------RLSAEDNARVNQAMEQT 126 (255)
T ss_pred cccCCCCCCccHHHHHHhccchhh----------hhcc-------------------------CCCHHHHHHHHHHHHHc
Confidence 999877777899999753210000 0000 00011234456778888
Q ss_pred CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhc
Q 006275 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLC 323 (652)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~ 323 (652)
|+. +..++++.+|||||+|||+|||||+.+|++|||||||+|||+.+++.+.++|+ +.++|||++||+++++.++|
T Consensus 127 ~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~ 205 (255)
T PRK11231 127 RIN-HLADRRLTDLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYC 205 (255)
T ss_pred CCH-HHHcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhc
Confidence 885 56788999999999999999999999999999999999999999999988874 35889999999999999999
Q ss_pred CeEEEEcCCeEEEecCChHHH
Q 006275 324 TKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 324 d~ii~l~~G~~~~~~g~~~~~ 344 (652)
|+++++++|++. ..|+++++
T Consensus 206 d~i~~l~~G~i~-~~~~~~~~ 225 (255)
T PRK11231 206 DHLVVLANGHVM-AQGTPEEV 225 (255)
T ss_pred CEEEEEECCeEE-EEcCHHHh
Confidence 999999999974 56765554
No 201
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.9e-41 Score=340.29 Aligned_cols=202 Identities=28% Similarity=0.420 Sum_probs=173.6
Q ss_pred EEEEEeeeeEeCCe----eeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceeccc---------
Q 006275 424 VVTIKNLEFGYEDR----LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP--------- 490 (652)
Q Consensus 424 ~i~~~~v~~~y~~~----~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~--------- 490 (652)
+|+++|++++|+++ ++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..
T Consensus 1 ~i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (233)
T cd03258 1 MIELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKA 80 (233)
T ss_pred CeEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHH
Confidence 47899999999876 89999999999999999999999999999999999999999999999987521
Q ss_pred ----ceecccccccCCCCCCHHHHHHHhhhh--c----cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHcc
Q 006275 491 ----NYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (652)
Q Consensus 491 ----~~~~~~~~~~~~~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~ 560 (652)
+|++|+ ..+++..|+.+|+...... . ....+.++++.+++. +..++++.+||||||||++|||||+.
T Consensus 81 ~~~i~~~~q~--~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~ 157 (233)
T cd03258 81 RRRIGMIFQH--FNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLE-DKADAYPAQLSGGQKQRVGIARALAN 157 (233)
T ss_pred HhheEEEccC--cccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCh-hhhhcChhhCCHHHHHHHHHHHHHhc
Confidence 233333 3456678999999764321 1 133577899999994 66789999999999999999999999
Q ss_pred CCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 561 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
+|++|||||||++||+.++..+.++|.++ +.|||+||||++++..+||++++|++|++.. .|+.++..
T Consensus 158 ~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 229 (233)
T cd03258 158 NPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVE-EGTVEEVF 229 (233)
T ss_pred CCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ecCHHHHh
Confidence 99999999999999999999999999764 4599999999999999999999999999974 56666543
No 202
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=3.2e-41 Score=338.70 Aligned_cols=190 Identities=32% Similarity=0.495 Sum_probs=164.2
Q ss_pred EEEEeeeeEeCC----eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-----------
Q 006275 425 VTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------- 489 (652)
Q Consensus 425 i~~~~v~~~y~~----~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------- 489 (652)
|+++||+++|++ +.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 478999999986 78999999999999999999999999999999999999999999999997652
Q ss_pred ---cceecccccccCCCCCCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHcc
Q 006275 490 ---PNYFEQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (652)
Q Consensus 490 ---~~~~~~~~~~~~~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~ 560 (652)
.+|++|. ..+++..|+.+|+....... ....+.++++.+|+. ...++++.+|||||||||+|||||+.
T Consensus 81 ~~~i~~~~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~ 157 (218)
T cd03255 81 RRHIGFVFQS--FNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLG-DRLNHYPSELSGGQQQRVAIARALAN 157 (218)
T ss_pred hhcEEEEeec--cccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCc-hhhhcChhhcCHHHHHHHHHHHHHcc
Confidence 1233333 34566789999998643211 124577899999995 56789999999999999999999999
Q ss_pred CCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEE
Q 006275 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (652)
Q Consensus 561 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i 618 (652)
+|++|||||||++||+.++..+.++|+++ +.|||+||||++++. +||++++|++|++
T Consensus 158 ~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 158 DPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAE-YADRIIELRDGKI 218 (218)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHh-hhcEEEEeeCCcC
Confidence 99999999999999999999999999864 459999999999997 8999999999874
No 203
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-41 Score=336.80 Aligned_cols=196 Identities=24% Similarity=0.366 Sum_probs=166.3
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------ceEEEEecc
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------~~i~~v~Q~ 169 (652)
|+++|++++|+++. .|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|+
T Consensus 1 i~~~~l~~~~~~~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~ 78 (211)
T cd03298 1 VRLDKIRFSYGEQP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSMLFQE 78 (211)
T ss_pred CEEEeEEEEeCCEe--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEEecc
Confidence 47899999998754 39999999999999999999999999999999999999999998743 259999999
Q ss_pred CccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCC
Q 006275 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (652)
Q Consensus 170 ~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (652)
+.+++..|++||+......... . ....+.++.++++.+|+.
T Consensus 79 ~~~~~~~tv~enl~~~~~~~~~--------------------------------------~-~~~~~~~~~~~l~~~~l~ 119 (211)
T cd03298 79 NNLFAHLTVEQNVGLGLSPGLK--------------------------------------L-TAEDRQAIEVALARVGLA 119 (211)
T ss_pred cccCCCCcHHHHHhcccccccC--------------------------------------c-cHHHHHHHHHHHHHcCCH
Confidence 9887788999998532110000 0 001133566778888986
Q ss_pred cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCe
Q 006275 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTK 325 (652)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~ 325 (652)
+..++++.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|++ .++|||++||+++++..+||+
T Consensus 120 -~~~~~~~~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~ 198 (211)
T cd03298 120 -GLEKRLPGELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQR 198 (211)
T ss_pred -HHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCE
Confidence 567888999999999999999999999999999999999999999999888753 489999999999999999999
Q ss_pred EEEEcCCeEE
Q 006275 326 IVETEMGVSR 335 (652)
Q Consensus 326 ii~l~~G~~~ 335 (652)
|+++++|++.
T Consensus 199 i~~l~~G~i~ 208 (211)
T cd03298 199 VVFLDNGRIA 208 (211)
T ss_pred EEEEECCEEe
Confidence 9999999874
No 204
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=7.9e-41 Score=340.92 Aligned_cols=203 Identities=26% Similarity=0.384 Sum_probs=175.6
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc------------cc
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------PN 491 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------~~ 491 (652)
+|+++|++++|+++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 1 ~l~~~~l~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 80 (240)
T PRK09493 1 MIEFKNVSKHFGPTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAG 80 (240)
T ss_pred CEEEEeEEEEECCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhceE
Confidence 478999999998888999999999999999999999999999999999999999999999997753 12
Q ss_pred eecccccccCCCCCCHHHHHHHhhh---h----ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCe
Q 006275 492 YFEQNQAEALDLDKTVLETVAEAAE---D----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (652)
Q Consensus 492 ~~~~~~~~~~~~~~tv~e~~~~~~~---~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~l 564 (652)
|++|+ ..+++..|+.+|+.+... . .....+.++++.+|+. ...++++.+||||||||++|||||+.+|++
T Consensus 81 ~~~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~la~al~~~p~l 157 (240)
T PRK09493 81 MVFQQ--FYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLA-ERAHHYPSELSGGQQQRVAIARALAVKPKL 157 (240)
T ss_pred EEecc--cccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCh-HHHhcChhhcCHHHHHHHHHHHHHhcCCCE
Confidence 44443 345667899999976421 1 1123467899999995 567999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 565 LVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 565 LlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
|||||||++||+.++..+.++|+++ +.|||+||||++++..+||++++|++|++. +.|+++++.+
T Consensus 158 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 225 (240)
T PRK09493 158 MLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIA-EDGDPQVLIK 225 (240)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-eeCCHHHHhc
Confidence 9999999999999999999999765 469999999999999999999999999997 4588777654
No 205
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=5.2e-41 Score=334.81 Aligned_cols=193 Identities=28% Similarity=0.386 Sum_probs=169.6
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------cceeccc
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQN 496 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~~~ 496 (652)
|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|+
T Consensus 1 l~~~~l~~~~~~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~ 80 (208)
T cd03268 1 LKTNDLTKTYGKKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGALIEA 80 (208)
T ss_pred CEEEEEEEEECCeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEecCC
Confidence 47899999998889999999999999999999999999999999999999999999999997652 2344443
Q ss_pred ccccCCCCCCHHHHHHHhhhh--ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCC
Q 006275 497 QAEALDLDKTVLETVAEAAED--WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHL 574 (652)
Q Consensus 497 ~~~~~~~~~tv~e~~~~~~~~--~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~L 574 (652)
..+++..|+.+|+...... ....++.++++.+++. +..++++.+|||||||||+|||||+.+|++|||||||++|
T Consensus 81 --~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 157 (208)
T cd03268 81 --PGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLK-DSAKKKVKGFSLGMKQRLGIALALLGNPDLLILDEPTNGL 157 (208)
T ss_pred --CccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCH-HHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccC
Confidence 3466788999999765321 2345678889999994 5678999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEe
Q 006275 575 DIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (652)
Q Consensus 575 D~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~ 620 (652)
|+.+++.+.++|.++ +.|||+||||++++..+||++++|++|++..
T Consensus 158 D~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~ 206 (208)
T cd03268 158 DPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIE 206 (208)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEe
Confidence 999999999999764 4699999999999999999999999999863
No 206
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-41 Score=350.79 Aligned_cols=205 Identities=25% Similarity=0.359 Sum_probs=175.3
Q ss_pred EEEEEeeeeEeCC-----eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------
Q 006275 424 VVTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~-----~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------- 489 (652)
+|+++|++++|+. +.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 mi~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 1 MIKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred CEEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 4899999999973 25999999999999999999999999999999999999999999999998752
Q ss_pred -----cceecccccccCCCCCCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHH
Q 006275 490 -----PNYFEQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (652)
Q Consensus 490 -----~~~~~~~~~~~~~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral 558 (652)
.+|+.|+....+ +..|+.+|+.+..... ....+.++++.+++.....++++.+||||||||++|||||
T Consensus 81 ~~~~~ig~v~q~~~~~l-~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA~aL 159 (288)
T PRK13643 81 PVRKKVGVVFQFPESQL-FEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIAGIL 159 (288)
T ss_pred HHHhhEEEEecCcchhc-ccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCCcccCCHHHHHHHHHHHHH
Confidence 235566533233 3469999998754321 1234678899999954567899999999999999999999
Q ss_pred ccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+||||++|++|++. +.|+++++..
T Consensus 160 ~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~-~~g~~~~~~~ 233 (288)
T PRK13643 160 AMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHII-SCGTPSDVFQ 233 (288)
T ss_pred HhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EECCHHHHHc
Confidence 9999999999999999999999999998764 469999999999999999999999999997 5688887654
No 207
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-41 Score=347.62 Aligned_cols=209 Identities=22% Similarity=0.378 Sum_probs=175.3
Q ss_pred CceEEEeEEEEeC-CeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEE
Q 006275 96 SGVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIA 164 (652)
Q Consensus 96 ~~i~v~~ls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~ 164 (652)
.+++++|++++|+ ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.. ..++
T Consensus 2 ~~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 2 HLIETRDLCYSYSGSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred ceEEEEEEEEEeCCCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 3589999999996 4569999999999999999999999999999999999999999999998742 2499
Q ss_pred EEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHh
Q 006275 165 FLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (652)
Q Consensus 165 ~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (652)
|++|++. .++..||.+|+...... . ..+.....+++.+++
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~--------------~-------------------------~~~~~~~~~~~~~~l 122 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPIN--------------L-------------------------GLDEETVAHRVSSAL 122 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHH--------------c-------------------------CCCHHHHHHHHHHHH
Confidence 9999974 33567999998521100 0 011112234566788
Q ss_pred hhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHH
Q 006275 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFL 319 (652)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l 319 (652)
+.+|+. +..++.+.+||||||||++|||||+.+|++|||||||+|||+.+++.+.++|++ .|.|||++||+++++
T Consensus 123 ~~~~l~-~~~~~~~~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~ 201 (277)
T PRK13652 123 HMLGLE-ELRDRVPHHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLV 201 (277)
T ss_pred HHCCCh-hHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHH
Confidence 888986 678899999999999999999999999999999999999999999999887742 489999999999999
Q ss_pred HhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 320 DQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 320 ~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
.++||||++|++|++ .+.|+.+++.
T Consensus 202 ~~~~drv~~l~~G~i-~~~g~~~~~~ 226 (277)
T PRK13652 202 PEMADYIYVMDKGRI-VAYGTVEEIF 226 (277)
T ss_pred HHhCCEEEEEECCeE-EEECCHHHHh
Confidence 999999999999998 4678877664
No 208
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-41 Score=351.13 Aligned_cols=203 Identities=26% Similarity=0.387 Sum_probs=174.0
Q ss_pred EEEEeeeeEeCC-----eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------
Q 006275 425 VTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (652)
Q Consensus 425 i~~~~v~~~y~~-----~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------- 489 (652)
|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 899999999974 46999999999999999999999999999999999999999999999998652
Q ss_pred ----cceecccccccCCCCCCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHc
Q 006275 490 ----PNYFEQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV 559 (652)
Q Consensus 490 ----~~~~~~~~~~~~~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~ 559 (652)
.+|++|+....+ +..|+.+|+.+..... ....+.++++.+++.....++++.+|||||||||+|||||+
T Consensus 83 ~~~~ig~v~q~~~~~l-~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lAraL~ 161 (290)
T PRK13634 83 LRKKVGIVFQFPEHQL-FEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELLARSPFELSGGQMRRVAIAGVLA 161 (290)
T ss_pred HHhhEEEEeeCchhhh-hhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHHHHHH
Confidence 245566532233 3579999998653211 12356788999999646678999999999999999999999
Q ss_pred cCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 560 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+||||++|++|++. ..|+++++.
T Consensus 162 ~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~-~~g~~~~~~ 234 (290)
T PRK13634 162 MEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVF-LQGTPREIF 234 (290)
T ss_pred cCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHHHHh
Confidence 999999999999999999999999998764 469999999999999999999999999997 467777654
No 209
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-41 Score=343.13 Aligned_cols=211 Identities=21% Similarity=0.253 Sum_probs=172.6
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCC-----CCcEEEECCCC----------
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN---------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~i~~~~~~---------- 160 (652)
.+|+++|++++|+++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+
T Consensus 3 ~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 82 (253)
T PRK14267 3 FAIETVNLRVYYGSNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIE 82 (253)
T ss_pred ceEEEEeEEEEeCCeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHH
Confidence 368999999999888899999999999999999999999999999999999987 49999998742
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
..++|++|++.+++..|+.||+...... .... ........+
T Consensus 83 ~~~~i~~~~q~~~~~~~~tv~enl~~~~~~---------------~~~~----------------------~~~~~~~~~ 125 (253)
T PRK14267 83 VRREVGMVFQYPNPFPHLTIYDNVAIGVKL---------------NGLV----------------------KSKKELDER 125 (253)
T ss_pred HhhceeEEecCCccCCCCcHHHHHHHHHHh---------------cCcc----------------------CCHHHHHHH
Confidence 2599999999887788999998532110 0000 000112234
Q ss_pred HHHHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006275 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (652)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (652)
+.++++.+|+.. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .++|||++|
T Consensus 126 ~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~s 205 (253)
T PRK14267 126 VEWALKKAALWDEVKDRLNDYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVT 205 (253)
T ss_pred HHHHHHHcCCccchhhhhccChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEE
Confidence 455666667632 246778999999999999999999999999999999999999999999988753 368999999
Q ss_pred cCHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
|+++++..+||+|++|++|++. ..|+.+++
T Consensus 206 H~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 235 (253)
T PRK14267 206 HSPAQAARVSDYVAFLYLGKLI-EVGPTRKV 235 (253)
T ss_pred CCHHHHHhhCCEEEEEECCEEE-EeCCHHHH
Confidence 9999999999999999999984 66776554
No 210
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=4.5e-41 Score=336.73 Aligned_cols=191 Identities=30% Similarity=0.420 Sum_probs=166.0
Q ss_pred EEEEEeeeeEe-CCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-------------
Q 006275 424 VVTIKNLEFGY-EDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y-~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------- 489 (652)
+|+++|++++| +++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 ~l~~~~l~~~~~~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 1 MIEFHNVSKAYPGGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred CEEEEeeeEEeCCCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 47899999999 4678999999999999999999999999999999999999999999999997652
Q ss_pred cceecccccccCCCCCCHHHHHHHhhh------hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCC
Q 006275 490 PNYFEQNQAEALDLDKTVLETVAEAAE------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (652)
Q Consensus 490 ~~~~~~~~~~~~~~~~tv~e~~~~~~~------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~ 563 (652)
.+|++|. ..+++..|+.+|+..... ......+.++++.+++. +..++++.+|||||||||+|||||+.+|+
T Consensus 81 i~~~~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~ 157 (214)
T TIGR02673 81 IGVVFQD--FRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLE-HKADAFPEQLSGGEQQRVAIARAIVNSPP 157 (214)
T ss_pred eEEEecC--hhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhCCCC
Confidence 1234443 345667899999976421 11234578899999995 56789999999999999999999999999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCE
Q 006275 564 LLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSN 617 (652)
Q Consensus 564 lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~ 617 (652)
+|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+
T Consensus 158 lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 158 LLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999865 4699999999999999999999999874
No 211
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.6e-41 Score=359.85 Aligned_cols=206 Identities=27% Similarity=0.445 Sum_probs=179.9
Q ss_pred CCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------cce
Q 006275 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNY 492 (652)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~ 492 (652)
..++|+++|+++.|++..+|+++||+|++||+++|+|||||||||||++|+|+.+|++|+|.++|.++. .+|
T Consensus 16 ~~~~l~l~~v~~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig~ 95 (377)
T PRK11607 16 LTPLLEIRNLTKSFDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPINM 95 (377)
T ss_pred CCceEEEEeEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 356799999999999888999999999999999999999999999999999999999999999998762 245
Q ss_pred ecccccccCCCCCCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEE
Q 006275 493 FEQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (652)
Q Consensus 493 ~~~~~~~~~~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLl 566 (652)
++|+ ..+++.+|+.||+.+..... ...++.++++.+++. +..++++.+|||||||||+|||||+.+|++||
T Consensus 96 vfQ~--~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~~~LSgGq~QRVaLARAL~~~P~lLL 172 (377)
T PRK11607 96 MFQS--YALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQ-EFAKRKPHQLSGGQRQRVALARSLAKRPKLLL 172 (377)
T ss_pred EeCC--CccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 6654 46788999999998764321 124577899999995 67899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHH----hcCceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 567 LDEPTNHLDIPSKEMLEEAIS----EYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 567 LDEPt~~LD~~~~~~l~~~l~----~~~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
|||||++||..++..+.+.|+ +.+.|+|+||||.+++..+|||+++|++|++.. .|+++++..
T Consensus 173 LDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~-~g~~~~~~~ 239 (377)
T PRK11607 173 LDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQ-IGEPEEIYE 239 (377)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEE-EcCHHHHHh
Confidence 999999999999998886654 346799999999999999999999999999974 577776654
No 212
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-41 Score=350.86 Aligned_cols=209 Identities=21% Similarity=0.281 Sum_probs=171.4
Q ss_pred CceEEEeEEEEeCCe-----eeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------
Q 006275 96 SGVKLENISKSYKGV-----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~-----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------- 160 (652)
..|+++|++++|+++ ++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 359999999999764 49999999999999999999999999999999999999999999987632
Q ss_pred -----ceEEEEeccCcc-CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhc
Q 006275 161 -----MKIAFLSQEFEV-SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDT 234 (652)
Q Consensus 161 -----~~i~~v~Q~~~~-~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (652)
..|+|++|++.. .+..|++||+...... . ......
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~---------------~------------------------~~~~~~ 125 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVN---------------L------------------------GENKQE 125 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHH---------------c------------------------CCCHHH
Confidence 258999999742 2346999998521100 0 000111
Q ss_pred HHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEE
Q 006275 235 LDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMV 310 (652)
Q Consensus 235 ~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvI 310 (652)
...++.++++.+++.....++++.+|||||||||+|||||+.+|++|||||||+|||+.+++.+.++|++ .++|||
T Consensus 126 ~~~~~~~ll~~~~L~~~~~~~~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii 205 (289)
T PRK13645 126 AYKKVPELLKLVQLPEDYVKRSPFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRII 205 (289)
T ss_pred HHHHHHHHHHHcCCChhHhcCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEE
Confidence 2234566788888854567889999999999999999999999999999999999999999999887642 488999
Q ss_pred EEecCHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 311 IISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 311 ivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
+|||+++++.++||+|++|++|++. +.|+.+++
T Consensus 206 iisH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 238 (289)
T PRK13645 206 MVTHNMDQVLRIADEVIVMHEGKVI-SIGSPFEI 238 (289)
T ss_pred EEecCHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 9999999999999999999999974 56766554
No 213
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-41 Score=354.41 Aligned_cols=210 Identities=24% Similarity=0.345 Sum_probs=174.3
Q ss_pred ceEEEeEEEEeCC----eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC----CCCcEEEECCCCc-------
Q 006275 97 GVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE----PDSGNVIKAKSNM------- 161 (652)
Q Consensus 97 ~i~v~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~----p~~G~i~~~~~~~------- 161 (652)
.|+++|+++.|+. .++|+||||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 5899999999976 469999999999999999999999999999999999997 4899999987531
Q ss_pred -------eEEEEeccCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCCh
Q 006275 162 -------KIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNL 232 (652)
Q Consensus 162 -------~i~~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (652)
.|+|++|++. +.+..|+.+++....... .....
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~--------------------------------------~~~~~ 124 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVH--------------------------------------QGGNK 124 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHh--------------------------------------cCCCH
Confidence 4999999983 556788888764221100 00111
Q ss_pred hcHHHHHHHHhhhcCCCc--ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCC
Q 006275 233 DTLDAKVSKLMPELGFTA--DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQD 306 (652)
Q Consensus 233 ~~~~~~i~~ll~~lgl~~--~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g 306 (652)
.+..+++.++++.+|+.. ...++++.+|||||||||+|||||+.+|++|||||||++||+.++..+.++|+ +.|
T Consensus 125 ~~~~~~~~~~L~~~gL~~~~~~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g 204 (326)
T PRK11022 125 KTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKEN 204 (326)
T ss_pred HHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcC
Confidence 223456778899999963 35688899999999999999999999999999999999999999999988764 358
Q ss_pred CeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 307 VPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 307 ~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
.|+|+||||++.+..+||+|++|.+|+++ ..|+..++.
T Consensus 205 ~til~iTHdl~~~~~~adri~vm~~G~iv-e~g~~~~~~ 242 (326)
T PRK11022 205 MALVLITHDLALVAEAAHKIIVMYAGQVV-ETGKAHDIF 242 (326)
T ss_pred CEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHHHHh
Confidence 99999999999999999999999999984 667766554
No 214
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-41 Score=347.68 Aligned_cols=212 Identities=26% Similarity=0.364 Sum_probs=175.2
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEEE
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~~ 165 (652)
.+|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|
T Consensus 10 ~~l~i~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 89 (265)
T PRK10575 10 TTFALRNVSFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAY 89 (265)
T ss_pred ceEEEeeEEEEECCEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheEE
Confidence 46999999999988889999999999999999999999999999999999999999999998743 25999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh
Q 006275 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (652)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (652)
++|++.+++..|+.+|+........ ..+. ........++.++++.
T Consensus 90 v~q~~~~~~~~tv~e~l~~~~~~~~----------~~~~-------------------------~~~~~~~~~~~~~l~~ 134 (265)
T PRK10575 90 LPQQLPAAEGMTVRELVAIGRYPWH----------GALG-------------------------RFGAADREKVEEAISL 134 (265)
T ss_pred eccCCCCCCCccHHHHHHhCccccc----------cccc-------------------------CCCHHHHHHHHHHHHH
Confidence 9999877778899999853210000 0000 0001123445677888
Q ss_pred cCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHh
Q 006275 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQ 321 (652)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~ 321 (652)
+|+. +..++++.+|||||||||+|||||+.+|+||||||||+|||+.+++.+.++|++ .|.|||++||+++++.+
T Consensus 135 ~~l~-~~~~~~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~ 213 (265)
T PRK10575 135 VGLK-PLAHRLVDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAAR 213 (265)
T ss_pred cCCH-HHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH
Confidence 8885 567888999999999999999999999999999999999999999988887642 48999999999999999
Q ss_pred hcCeEEEEcCCeEEEecCChHHH
Q 006275 322 LCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 322 ~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
+||+|++|++|++. ..|+.+++
T Consensus 214 ~~d~i~~l~~G~i~-~~~~~~~~ 235 (265)
T PRK10575 214 YCDYLVALRGGEMI-AQGTPAEL 235 (265)
T ss_pred hCCEEEEEECCeEE-EecCHHHh
Confidence 99999999999984 56665543
No 215
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-41 Score=343.87 Aligned_cols=194 Identities=27% Similarity=0.402 Sum_probs=169.8
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-----cceeccccc
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----PNYFEQNQA 498 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----~~~~~~~~~ 498 (652)
+|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|.
T Consensus 1 ml~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~-- 78 (255)
T PRK11248 1 MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGPGAERGVVFQN-- 78 (255)
T ss_pred CEEEEEEEEEeCCeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCCcEEEEeCC--
Confidence 488999999998888999999999999999999999999999999999999999999999998753 2455554
Q ss_pred ccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCC
Q 006275 499 EALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTN 572 (652)
Q Consensus 499 ~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~ 572 (652)
..+++..|+.+|+...... .....+.++++.+++. ...++++.+|||||||||+|||||+.+|++|||||||+
T Consensus 79 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~ 157 (255)
T PRK11248 79 EGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLE-GAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFG 157 (255)
T ss_pred CccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCh-hHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 3456678999999764211 1124578899999995 56789999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEe--CCEEEe
Q 006275 573 HLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVK--GSNLQD 620 (652)
Q Consensus 573 ~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~--~g~i~~ 620 (652)
+||+.++..+.+.|+++ +.|||+||||++++..+||++++|+ +|++.+
T Consensus 158 ~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~ 211 (255)
T PRK11248 158 ALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVE 211 (255)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEE
Confidence 99999999999999865 4699999999999999999999998 599874
No 216
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-41 Score=357.47 Aligned_cols=203 Identities=29% Similarity=0.411 Sum_probs=175.1
Q ss_pred EEEEEeeeeEeC----CeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------
Q 006275 424 VVTIKNLEFGYE----DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~----~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------- 489 (652)
||+++||+++|+ ++.+|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 mi~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 80 (343)
T PRK11153 1 MIELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKA 80 (343)
T ss_pred CEEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 489999999997 468999999999999999999999999999999999999999999999998753
Q ss_pred ---cceecccccccCCCCCCHHHHHHHhhhh--c----cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHcc
Q 006275 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (652)
Q Consensus 490 ---~~~~~~~~~~~~~~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~ 560 (652)
.+|++|+ ..+++..|+.+|+.+.... . ....+.++++.+|+. +..++++.+|||||||||+|||||+.
T Consensus 81 ~~~ig~v~q~--~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LSgGq~qRv~lAraL~~ 157 (343)
T PRK11153 81 RRQIGMIFQH--FNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLS-DKADRYPAQLSGGQKQRVAIARALAS 157 (343)
T ss_pred hcCEEEEeCC--CccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHHHc
Confidence 1244443 3466778999999875321 1 123567889999995 67899999999999999999999999
Q ss_pred CCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 561 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
+|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+|||+++|++|++.. .|+.++...
T Consensus 158 ~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~-~g~~~~~~~ 230 (343)
T PRK11153 158 NPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVE-QGTVSEVFS 230 (343)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHHh
Confidence 99999999999999999999999999865 4699999999999999999999999999974 577666543
No 217
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.8e-41 Score=338.05 Aligned_cols=192 Identities=29% Similarity=0.456 Sum_probs=164.8
Q ss_pred EEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-----cceeccccccc
Q 006275 426 TIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----PNYFEQNQAEA 500 (652)
Q Consensus 426 ~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----~~~~~~~~~~~ 500 (652)
+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|+....
T Consensus 1 ~~~~l~~~~~~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~~~~ 80 (213)
T cd03235 1 EVEDLTVSYGGHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRRSID 80 (213)
T ss_pred CcccceeEECCEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEeccccccc
Confidence 3689999998888999999999999999999999999999999999999999999999997642 34666653221
Q ss_pred CCCCCCHHHHHHHhhhh----------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCC
Q 006275 501 LDLDKTVLETVAEAAED----------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (652)
Q Consensus 501 ~~~~~tv~e~~~~~~~~----------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEP 570 (652)
..+..|+.+|+...... ...+.+.++++.+++. +..++++.+||||||||++|||||+.+|++||||||
T Consensus 81 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEP 159 (213)
T cd03235 81 RDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLS-ELADRQIGELSGGQQQRVLLARALVQDPDLLLLDEP 159 (213)
T ss_pred cCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCH-HHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 12447999999764321 1124577899999994 678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEE
Q 006275 571 TNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (652)
Q Consensus 571 t~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i 618 (652)
|++||+.++..+.+.|.++ +.|||+||||++++.++||++++|++|.+
T Consensus 160 t~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~~~ 210 (213)
T cd03235 160 FAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRTVV 210 (213)
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCcEe
Confidence 9999999999999999865 35999999999999999999999998754
No 218
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-41 Score=349.06 Aligned_cols=205 Identities=26% Similarity=0.404 Sum_probs=174.9
Q ss_pred EEEEEeeeeEeCC-----eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------
Q 006275 424 VVTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~-----~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------- 489 (652)
.|+++||++.|++ +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 3899999999974 46999999999999999999999999999999999999999999999997752
Q ss_pred ---cceecccccccCCCCCCHHHHHHHhhhh--c----cHHHHHHHHhhCCCC-hhhhccCcCCCCHHHHHHHHHHHHHc
Q 006275 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFK-ADMLDRKVSLLSGGEKARLAFCKFMV 559 (652)
Q Consensus 490 ---~~~~~~~~~~~~~~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~-~~~~~~~~~~LSgGqrqrv~LAral~ 559 (652)
.+|++|+... ..+..|+.+|+.+.... . ....+.++++.+|+. .+..++++.+||||||||++|||||+
T Consensus 82 ~~~ig~v~q~~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAraL~ 160 (287)
T PRK13637 82 RKKVGLVFQYPEY-QLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAGVVA 160 (287)
T ss_pred hhceEEEecCchh-ccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHHHHH
Confidence 1355665322 23467999999864321 1 123577899999995 24679999999999999999999999
Q ss_pred cCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 560 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+||||++|++|++. ..|+.+++++
T Consensus 161 ~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~-~~g~~~~~~~ 234 (287)
T PRK13637 161 MEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCE-LQGTPREVFK 234 (287)
T ss_pred cCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHHHHHh
Confidence 999999999999999999999999999764 469999999999999999999999999997 4687777654
No 219
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1e-40 Score=354.46 Aligned_cols=208 Identities=23% Similarity=0.419 Sum_probs=178.2
Q ss_pred CcEEEEEeeeeEeCC-------------eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceec
Q 006275 422 RSVVTIKNLEFGYED-------------RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV 488 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~-------------~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~ 488 (652)
+++|+++||++.|+. ..+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++
T Consensus 6 ~~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i 85 (331)
T PRK15079 6 KVLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDL 85 (331)
T ss_pred CceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEEC
Confidence 467999999999962 4689999999999999999999999999999999999999999999999875
Q ss_pred c-------------cceecccccccCCCCCCHHHHHHHhhhh----cc----HHHHHHHHhhCCCChhhhccCcCCCCHH
Q 006275 489 L-------------PNYFEQNQAEALDLDKTVLETVAEAAED----WR----IDDIKGLLGRCNFKADMLDRKVSLLSGG 547 (652)
Q Consensus 489 ~-------------~~~~~~~~~~~~~~~~tv~e~~~~~~~~----~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgG 547 (652)
. .+|+.|+....+++.+|+.+|+.+.... .. ...+.++++.+++.....++++.+||||
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p~~LSgG 165 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRYPHEFSGG 165 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCCcccCCHH
Confidence 2 2355665433577789999998764211 11 2346788999999656789999999999
Q ss_pred HHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecC
Q 006275 548 EKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAG 623 (652)
Q Consensus 548 qrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g 623 (652)
|||||+|||||+.+|+||||||||++||+.++..+.++|++. +.|+|+||||++++.++||||++|++|++++ .|
T Consensus 166 ~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ive-~g 244 (331)
T PRK15079 166 QCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVE-LG 244 (331)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-Ec
Confidence 999999999999999999999999999999999999988754 5699999999999999999999999999985 47
Q ss_pred ChhhHhh
Q 006275 624 DYNVCFT 630 (652)
Q Consensus 624 ~~~~~~~ 630 (652)
+.+++++
T Consensus 245 ~~~~i~~ 251 (331)
T PRK15079 245 TYDEVYH 251 (331)
T ss_pred CHHHHHc
Confidence 7666543
No 220
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=6.8e-41 Score=344.70 Aligned_cols=210 Identities=28% Similarity=0.386 Sum_probs=175.5
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEEEEe
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFLS 167 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~~v~ 167 (652)
|+++|+++.|+++++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|++
T Consensus 2 l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~ 81 (256)
T TIGR03873 2 LRLSRVSWSAGGRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVALVE 81 (256)
T ss_pred ceEEeEEEEECCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEEec
Confidence 789999999998899999999999999999999999999999999999999999999998742 2499999
Q ss_pred ccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcC
Q 006275 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (652)
Q Consensus 168 Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (652)
|++..++..||.||+........ ... ........+++.++++.+|
T Consensus 82 q~~~~~~~~tv~e~l~~~~~~~~----------~~~-------------------------~~~~~~~~~~~~~~l~~~~ 126 (256)
T TIGR03873 82 QDSDTAVPLTVRDVVALGRIPHR----------SLW-------------------------AGDSPHDAAVVDRALARTE 126 (256)
T ss_pred ccCccCCCCCHHHHHHhcchhhh----------hhc-------------------------cCCCHHHHHHHHHHHHHcC
Confidence 99877778899999853210000 000 0001112335667888888
Q ss_pred CCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcC
Q 006275 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCT 324 (652)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~~d 324 (652)
+. +..++++.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|++ .+.|||++||+++++..+||
T Consensus 127 l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d 205 (256)
T TIGR03873 127 LS-HLADRDMSTLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCD 205 (256)
T ss_pred cH-hhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC
Confidence 85 677899999999999999999999999999999999999999999999888753 48899999999999999999
Q ss_pred eEEEEcCCeEEEecCChHHH
Q 006275 325 KIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 325 ~ii~l~~G~~~~~~g~~~~~ 344 (652)
+|++|++|++. ..|+.+++
T Consensus 206 ~i~~l~~G~i~-~~g~~~~~ 224 (256)
T TIGR03873 206 HVVVLDGGRVV-AAGPPREV 224 (256)
T ss_pred EEEEEeCCCEE-EecCHHHh
Confidence 99999999974 66765554
No 221
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-40 Score=343.07 Aligned_cols=209 Identities=22% Similarity=0.296 Sum_probs=170.5
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCC-----CCcEEEECCCC----------
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN---------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~i~~~~~~---------- 160 (652)
.+|+++|++++|+++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 6 ~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 85 (254)
T PRK14273 6 AIIETENLNLFYTDFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILE 85 (254)
T ss_pred ceEEEeeeEEEeCCceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHH
Confidence 469999999999888899999999999999999999999999999999999997 48999997642
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
..|+|++|++.++ ..||+||+....... . ..........
T Consensus 86 ~~~~i~~v~q~~~~~-~~tv~eni~~~~~~~---------------~-----------------------~~~~~~~~~~ 126 (254)
T PRK14273 86 LRRKIGMVFQTPNPF-LMSIYDNISYGPKIH---------------G-----------------------TKDKKKLDEI 126 (254)
T ss_pred HhhceEEEeeccccc-cCcHHHHHHHHHHhc---------------C-----------------------CCCHHHHHHH
Confidence 2499999998775 589999985321100 0 0000112233
Q ss_pred HHHHhhhcCCC---cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006275 239 VSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (652)
Q Consensus 239 i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (652)
+.++++.+|+. .+..++.+.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .+.|||++|
T Consensus 127 ~~~~l~~~~l~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~s 206 (254)
T PRK14273 127 VEQSLKKSALWNEVKDKLNTNALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVT 206 (254)
T ss_pred HHHHHHHhCCchhhHHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 44556666652 1346778999999999999999999999999999999999999999999888753 368999999
Q ss_pred cCHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
|+++++..+||+|++|++|++. ..|+.+++
T Consensus 207 H~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 236 (254)
T PRK14273 207 HNMQQAGRISDRTAFFLNGCIE-EESSTDEL 236 (254)
T ss_pred CCHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 9999999999999999999984 56776554
No 222
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=352.58 Aligned_cols=209 Identities=24% Similarity=0.317 Sum_probs=175.7
Q ss_pred CCCCcEEEEEeeeeEeCC-----eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----
Q 006275 419 RSGRSVVTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---- 489 (652)
Q Consensus 419 ~~~~~~i~~~~v~~~y~~-----~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---- 489 (652)
.++.++|+++|+++.|++ +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 16 ~~~~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~ 95 (320)
T PRK13631 16 LSDDIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKN 95 (320)
T ss_pred CCCCceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccc
Confidence 345678999999999974 36999999999999999999999999999999999999999999999986542
Q ss_pred ----------------------cceecccccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCc
Q 006275 490 ----------------------PNYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKV 541 (652)
Q Consensus 490 ----------------------~~~~~~~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~ 541 (652)
.+++.|+....+ +..|+.+|+.+.... .....+.++++.+++.....++++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l-~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~ 174 (320)
T PRK13631 96 NHELITNPYSKKIKNFKELRRRVSMVFQFPEYQL-FKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDDSYLERSP 174 (320)
T ss_pred cccccccccccccchHHHHHhcEEEEEECchhcc-ccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCChhHhcCCc
Confidence 124444432223 346999999765321 112346788999999645689999
Q ss_pred CCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEE
Q 006275 542 SLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (652)
Q Consensus 542 ~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i 618 (652)
.+|||||||||+|||||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||||++|++|++
T Consensus 175 ~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~i 254 (320)
T PRK13631 175 FGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGKI 254 (320)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999754 46999999999999999999999999999
Q ss_pred EeecCChhhHh
Q 006275 619 QDYAGDYNVCF 629 (652)
Q Consensus 619 ~~~~g~~~~~~ 629 (652)
. ..|+++++.
T Consensus 255 ~-~~g~~~~~~ 264 (320)
T PRK13631 255 L-KTGTPYEIF 264 (320)
T ss_pred E-EeCCHHHHh
Confidence 7 458777654
No 223
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-41 Score=346.18 Aligned_cols=212 Identities=24% Similarity=0.312 Sum_probs=176.4
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEEE
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~~ 165 (652)
..|+++|++++|+++.+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|
T Consensus 6 ~~l~i~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 85 (265)
T PRK10253 6 ARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRIGL 85 (265)
T ss_pred cEEEEEEEEEEECCEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhheEE
Confidence 45999999999998889999999999999999999999999999999999999999999998743 25999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh
Q 006275 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (652)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (652)
++|++.+++..|+++|+.......... +. ........++.++++.
T Consensus 86 v~q~~~~~~~~tv~~~~~~~~~~~~~~----------~~-------------------------~~~~~~~~~~~~~l~~ 130 (265)
T PRK10253 86 LAQNATTPGDITVQELVARGRYPHQPL----------FT-------------------------RWRKEDEEAVTKAMQA 130 (265)
T ss_pred eeccCcCCCCCcHHHHHHhCccccccc----------cc-------------------------CCCHHHHHHHHHHHHH
Confidence 999998877889999985321000000 00 0000112345677888
Q ss_pred cCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHh
Q 006275 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQ 321 (652)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~ 321 (652)
+|+. +..++.+.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|++ .+.|||++||+++++.+
T Consensus 131 ~~l~-~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~ 209 (265)
T PRK10253 131 TGIT-HLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACR 209 (265)
T ss_pred cCCH-HHhcCCcccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH
Confidence 8886 567899999999999999999999999999999999999999999999887743 48899999999999999
Q ss_pred hcCeEEEEcCCeEEEecCChHHH
Q 006275 322 LCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 322 ~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
+||+|+++++|++. ..|..+++
T Consensus 210 ~~d~i~~l~~G~i~-~~g~~~~~ 231 (265)
T PRK10253 210 YASHLIALREGKIV-AQGAPKEI 231 (265)
T ss_pred hCCEEEEEECCEEE-EeCCHHHH
Confidence 99999999999974 66765554
No 224
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-41 Score=346.73 Aligned_cols=207 Identities=27% Similarity=0.399 Sum_probs=172.6
Q ss_pred ceEEEeEEEEeC-CeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------ceEE
Q 006275 97 GVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIA 164 (652)
Q Consensus 97 ~i~v~~ls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----------~~i~ 164 (652)
+|+++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..|+
T Consensus 1 ml~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 1 MIRLENVSYSYPDGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred CEEEEEEEEEcCCCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 378999999996 4679999999999999999999999999999999999999999999998742 2499
Q ss_pred EEeccCcc-CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHh
Q 006275 165 FLSQEFEV-SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (652)
Q Consensus 165 ~v~Q~~~~-~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (652)
|++|++.. ++..|+++|+...... . ..+.....+++.+++
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~--------------~-------------------------~~~~~~~~~~~~~~l 121 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPEN--------------L-------------------------CLPPIEIRKRVDRAL 121 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHH--------------c-------------------------CCCHHHHHHHHHHHH
Confidence 99999853 4567999998521100 0 011112334566778
Q ss_pred hhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHH
Q 006275 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLD 320 (652)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~ 320 (652)
+.+|+. ...++++.+|||||||||+|||||+.+|+||||||||+|||+.++..+.++|+ +.|.|||++|||++++
T Consensus 122 ~~~gl~-~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~- 199 (274)
T PRK13644 122 AEIGLE-KYRHRSPKTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEEL- 199 (274)
T ss_pred HHCCCH-HHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHH-
Confidence 888986 56788999999999999999999999999999999999999999999988774 4589999999999999
Q ss_pred hhcCeEEEEcCCeEEEecCChHHHH
Q 006275 321 QLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 321 ~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
..||+|+++++|++. +.|+.+++.
T Consensus 200 ~~~d~v~~l~~G~i~-~~g~~~~~~ 223 (274)
T PRK13644 200 HDADRIIVMDRGKIV-LEGEPENVL 223 (274)
T ss_pred hhCCEEEEEECCEEE-EECCHHHHh
Confidence 569999999999984 667766543
No 225
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=342.41 Aligned_cols=204 Identities=27% Similarity=0.401 Sum_probs=175.1
Q ss_pred CcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceeccc-----------
Q 006275 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP----------- 490 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~----------- 490 (652)
+.+|+++|+++.|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++..
T Consensus 3 ~~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 3 QPLLSVSGLMMRFGGLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred CceEEEeeEEEEECCEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 347999999999998899999999999999999999999999999999999999999999999986521
Q ss_pred ceecccccccCCCCCCHHHHHHHhhh------------------hc---cHHHHHHHHhhCCCChhhhccCcCCCCHHHH
Q 006275 491 NYFEQNQAEALDLDKTVLETVAEAAE------------------DW---RIDDIKGLLGRCNFKADMLDRKVSLLSGGEK 549 (652)
Q Consensus 491 ~~~~~~~~~~~~~~~tv~e~~~~~~~------------------~~---~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqr 549 (652)
.|++| ...+++..|+.+|+..... .. ....+.++++.+|+. +..++++.+||||||
T Consensus 83 ~~~~q--~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~ 159 (255)
T PRK11300 83 VRTFQ--HVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLL-EHANRQAGNLAYGQQ 159 (255)
T ss_pred EEecc--CcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChh-hhhhCChhhCCHHHH
Confidence 12343 3456677899999986421 00 113467788999984 678999999999999
Q ss_pred HHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCCh
Q 006275 550 ARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDY 625 (652)
Q Consensus 550 qrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~ 625 (652)
|||+|||||+.+|++|||||||++||+.++..+.+.|.++ +.|||++||+++++.++||++++|++|++. +.|+.
T Consensus 160 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~-~~~~~ 238 (255)
T PRK11300 160 RRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPL-ANGTP 238 (255)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEE-ecCCH
Confidence 9999999999999999999999999999999999998754 469999999999999999999999999997 45777
Q ss_pred hhHh
Q 006275 626 NVCF 629 (652)
Q Consensus 626 ~~~~ 629 (652)
+++.
T Consensus 239 ~~~~ 242 (255)
T PRK11300 239 EEIR 242 (255)
T ss_pred HHHh
Confidence 6654
No 226
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=8.2e-41 Score=345.81 Aligned_cols=211 Identities=24% Similarity=0.420 Sum_probs=177.4
Q ss_pred EEEEEeeeeEeC---------CeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-----
Q 006275 424 VVTIKNLEFGYE---------DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~---------~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----- 489 (652)
+|+++||++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 589999999995 367999999999999999999999999999999999999999999999997652
Q ss_pred --------cceecccccccCCCCCCHHHHHHHhhh---h----ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHH
Q 006275 490 --------PNYFEQNQAEALDLDKTVLETVAEAAE---D----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAF 554 (652)
Q Consensus 490 --------~~~~~~~~~~~~~~~~tv~e~~~~~~~---~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~L 554 (652)
.+|++|.....+.+..|+.+|+..... . .....+.++++.+++.....++++.+|||||||||+|
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~qrv~l 161 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSEDADKLPRQLSGGQLQRINI 161 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHH
Confidence 234444432234567899999864321 1 1124577899999995456789999999999999999
Q ss_pred HHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|++. ..|+.++...
T Consensus 162 aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 240 (265)
T TIGR02769 162 ARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIV-EECDVAQLLS 240 (265)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEE-EECCHHHHcC
Confidence 99999999999999999999999999999998764 569999999999999999999999999997 4588887765
Q ss_pred hcCCc
Q 006275 631 SFSPF 635 (652)
Q Consensus 631 ~~~~~ 635 (652)
..+++
T Consensus 241 ~~~~~ 245 (265)
T TIGR02769 241 FKHPA 245 (265)
T ss_pred CCCHH
Confidence 44444
No 227
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=2.6e-39 Score=392.67 Aligned_cols=315 Identities=19% Similarity=0.238 Sum_probs=189.1
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHH---------HHHcCCCCCCcEEEECCCCceEEEEe
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLR---------IIAGQEEPDSGNVIKAKSNMKIAFLS 167 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~---------~L~G~~~p~~G~i~~~~~~~~i~~v~ 167 (652)
.|++++++. ..|+++||+|++|++++|+|+||||||||++ .|.|...+..+ +.. +.-.++-++.
T Consensus 600 ~L~l~~~~~-----~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~-i~g-~~i~~vi~id 672 (1809)
T PRK00635 600 TLTLSKATK-----HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLS-IQW-GAISRLVHIT 672 (1809)
T ss_pred eEEEecccc-----CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCccccc-ccc-cccceeEEec
Confidence 588888863 3799999999999999999999999999999 56665433211 110 1112456666
Q ss_pred ccCccCC-C---CC---HHHHHHHhhHHHHHHH-HHHHHHHHHHh-------h-----------------h---c---ch
Q 006275 168 QEFEVSM-S---RT---VREEFMSAFKEEMEIA-GKLERVQKALE-------S-----------------A---V---DD 209 (652)
Q Consensus 168 Q~~~~~~-~---~T---v~e~i~~~~~~~~~~~-~~~~~~~~~~~-------~-----------------~---~---~~ 209 (652)
|.|.--. . .| +++.+...|....... .........+. . | . ..
T Consensus 673 Qspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~ 752 (1809)
T PRK00635 673 RDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRFL 752 (1809)
T ss_pred CCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCcccC
Confidence 6652211 1 11 3444443322100000 00000000000 0 0 0 00
Q ss_pred hHHHHhhHHHH---HHHH---HHH-H-hCChhcHHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHc---cCC
Q 006275 210 MDLMGRLLDEF---DLLQ---RKA-Q-AVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILL---QDP 278 (652)
Q Consensus 210 ~~~~~~~~~~~---~~~~---~~~-~-~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~---~~p 278 (652)
.+.++...+.. +.+. ..+ . ..+...+.+++ ++|+.+|+.....++++.+|||||+|||+|||||+ .+|
T Consensus 753 ~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~~~tLSGGE~QRV~LAraL~~~~~~P 831 (1809)
T PRK00635 753 PQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRPLSSLSGGEIQRLKLAYELLAPSKKP 831 (1809)
T ss_pred HHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCccccCCHHHHHHHHHHHHHhhcCCCC
Confidence 01110000000 0000 000 0 01123445566 57888999632368899999999999999999997 699
Q ss_pred CeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCeEEEEc------CCeEEEecCChHHHHHHHH
Q 006275 279 DLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTKIVETE------MGVSRTYEGNYSQYVLEKA 349 (652)
Q Consensus 279 ~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~d~ii~l~------~G~~~~~~g~~~~~~~~~~ 349 (652)
++|||||||+|||+.+++.+.++|+ +.|.|||+|||+++++ .+||+|++|. .|++ ...|+.+++.....
T Consensus 832 ~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i-~~aDrVi~L~p~gg~~~G~i-v~~Gtpeel~~~~s 909 (1809)
T PRK00635 832 TLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVV-KVADYVLELGPEGGNLGGYL-LASCSPEELIHLHT 909 (1809)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH-HhCCEEEEEccCCCCCCCEE-EEeCCHHHHHhccC
Confidence 9999999999999999999988764 4689999999999999 8999999996 4555 57788766532100
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHHHHHHhhhcccccccceEEecCCCCCCCCcEEEEEe
Q 006275 350 AWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKN 429 (652)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~ 429 (652)
.. . ..+...+... ... . ... |+.. .. ++..+
T Consensus 910 ~t-----~---------~~l~~~l~~~-------------------------~~~---~--~~~-~~~~---~~-l~~~~ 940 (1809)
T PRK00635 910 PT-----A---------KALRPYLSSP-------------------------QEL---P--YLP-DPSP---KP-PVPAD 940 (1809)
T ss_pred ch-----H---------HHHHHHhhcc-------------------------ccc---c--ccc-cccc---cc-cccce
Confidence 00 0 0000000000 000 0 000 1100 11 34556
Q ss_pred eeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHH
Q 006275 430 LEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLI 470 (652)
Q Consensus 430 v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l 470 (652)
+.+.+.....|+|+||+|++|++++|+|+||||||||+..+
T Consensus 941 i~i~~~~~~~lk~isl~i~~gei~~itG~nGsGKStL~~~~ 981 (1809)
T PRK00635 941 ITIKNAYQHNLKHIDLSLPRNALTAVTGPSASGKHSLVFDI 981 (1809)
T ss_pred EEEeccccccccceeEEecCCcEEEEECCCCCChhHHHHHH
Confidence 66666545679999999999999999999999999977665
No 228
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=1.5e-40 Score=341.47 Aligned_cols=210 Identities=25% Similarity=0.406 Sum_probs=172.6
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------------
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------------- 160 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------------- 160 (652)
+|+++|++++|++.++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 82 (253)
T TIGR02323 3 LLQVSGLSKSYGGGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAERRR 82 (253)
T ss_pred eEEEeeeEEEeCCceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHHHH
Confidence 5999999999988889999999999999999999999999999999999999999999998643
Q ss_pred ---ceEEEEeccCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcH
Q 006275 161 ---MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTL 235 (652)
Q Consensus 161 ---~~i~~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (652)
..++|++|++. +.+..|+.+|+...+.. ... ......
T Consensus 83 ~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~--------------~~~------------------------~~~~~~ 124 (253)
T TIGR02323 83 LMRTEWGFVHQNPRDGLRMRVSAGANIGERLMA--------------IGA------------------------RHYGNI 124 (253)
T ss_pred hhhcceEEEEeCcccccCccccHHHHHHHHHHH--------------hcc------------------------cchHHH
Confidence 14899999974 33456888887421100 000 000011
Q ss_pred HHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEE
Q 006275 236 DAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVI 311 (652)
Q Consensus 236 ~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIi 311 (652)
...+.++++.+|+.....++.+.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|+ +.+.|||+
T Consensus 125 ~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~ 204 (253)
T TIGR02323 125 RAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVII 204 (253)
T ss_pred HHHHHHHHHHcCCChhhhhcCchhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 24556788888986446788899999999999999999999999999999999999999999988774 24899999
Q ss_pred EecCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 312 ISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 312 vsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
|||+++++..+||+++++++|++. ..|..+++.
T Consensus 205 vsH~~~~~~~~~d~~~~l~~G~i~-~~~~~~~~~ 237 (253)
T TIGR02323 205 VTHDLGVARLLAQRLLVMQQGRVV-ESGLTDQVL 237 (253)
T ss_pred EeCCHHHHHHhcCEEEEEECCEEE-EECCHHHHh
Confidence 999999999999999999999984 566655543
No 229
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.1e-41 Score=333.56 Aligned_cols=193 Identities=25% Similarity=0.436 Sum_probs=168.8
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc------cceeccccc
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------PNYFEQNQA 498 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------~~~~~~~~~ 498 (652)
++++|+++.|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|.
T Consensus 1 l~~~~l~~~~~~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q~-- 78 (210)
T cd03269 1 LEVENVTKRFGRVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPEE-- 78 (210)
T ss_pred CEEEEEEEEECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEeccC--
Confidence 47899999999889999999999999999999999999999999999999999999999997652 2355544
Q ss_pred ccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCC
Q 006275 499 EALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTN 572 (652)
Q Consensus 499 ~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~ 572 (652)
..+++..|+.+|+...... ...+.+.++++.+++. ...++++.+||||||||++|||||+.+|++|||||||+
T Consensus 79 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~~lllDEP~~ 157 (210)
T cd03269 79 RGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELS-EYANKRVEELSKGNQQKVQFIAAVIHDPELLILDEPFS 157 (210)
T ss_pred CcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCCh-HHHhCcHhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 3456678999998764321 1134577889999995 56789999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEe
Q 006275 573 HLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (652)
Q Consensus 573 ~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~ 620 (652)
+||+.+++.+.+.|+++ +.|||++|||++++..+||++++|++|++..
T Consensus 158 ~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~ 208 (210)
T cd03269 158 GLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVL 208 (210)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEe
Confidence 99999999999999865 4599999999999999999999999999864
No 230
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=8.3e-41 Score=345.23 Aligned_cols=216 Identities=21% Similarity=0.374 Sum_probs=177.6
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCC---CcEEEECCCC------------
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD---SGNVIKAKSN------------ 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~---~G~i~~~~~~------------ 160 (652)
++|+++|++++|+++++|+++||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|..
T Consensus 3 ~~l~~~nl~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (262)
T PRK09984 3 TIIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIR 82 (262)
T ss_pred cEEEEeeEEEEeCCeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHH
Confidence 3699999999999889999999999999999999999999999999999999986 4999988742
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHH
Q 006275 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (652)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (652)
..++|++|++.+++..|+.+|+............ ... .........
T Consensus 83 ~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~------~~~-------------------------~~~~~~~~~ 131 (262)
T PRK09984 83 KSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWR------TCF-------------------------SWFTREQKQ 131 (262)
T ss_pred HHHhheEEEccccccccCCcHHHHHHhhhcccccchh------hhc-------------------------ccccHHHHH
Confidence 1489999999887888999998532100000000 000 000012234
Q ss_pred HHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEe
Q 006275 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIIS 313 (652)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivs 313 (652)
++.++++.+|+. ...++.+.+|||||||||+|||||+.+|++|||||||+|||+.+++.+.++|++ .|+|||++|
T Consensus 132 ~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~t 210 (262)
T PRK09984 132 RALQALTRVGMV-HFAHQRVSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTL 210 (262)
T ss_pred HHHHHHHHcCCH-HHHhCCccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 567788899986 567889999999999999999999999999999999999999999999888753 479999999
Q ss_pred cCHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
||++++..+||+|+++++|++ .+.|+++++
T Consensus 211 H~~~~~~~~~d~i~~l~~g~i-~~~g~~~~~ 240 (262)
T PRK09984 211 HQVDYALRYCERIVALRQGHV-FYDGSSQQF 240 (262)
T ss_pred CCHHHHHHhCCEEEEEECCEE-EEeCCHHHh
Confidence 999999999999999999998 577887664
No 231
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=348.27 Aligned_cols=205 Identities=23% Similarity=0.381 Sum_probs=173.4
Q ss_pred EEEEEeeeeEeCC-----eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------
Q 006275 424 VVTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~-----~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------- 489 (652)
+|+++|+++.|++ +.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 4899999999973 46999999999999999999999999999999999999999999999998652
Q ss_pred -----cceecccccccCCCCCCHHHHHHHhhhh--c----cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHH
Q 006275 490 -----PNYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (652)
Q Consensus 490 -----~~~~~~~~~~~~~~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral 558 (652)
.+|++|+....+ +..|+.+|+.+.... . ....+.++++.+++.....++++.+||||||||++|||||
T Consensus 82 ~~~~~ig~v~q~~~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~laral 160 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQL-FENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLISKSPFELSGGQMRRVAIAGVM 160 (287)
T ss_pred HHHhceEEEEeChhhhh-ccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhhCCcccCCHHHHHHHHHHHHH
Confidence 134444422123 357999999764321 1 1234678899999954578999999999999999999999
Q ss_pred ccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|++. ..|+.++..+
T Consensus 161 ~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~~ 234 (287)
T PRK13641 161 AYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLI-KHASPKEIFS 234 (287)
T ss_pred HcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHhc
Confidence 9999999999999999999999999999865 359999999999999999999999999987 4577776543
No 232
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=342.25 Aligned_cols=210 Identities=21% Similarity=0.320 Sum_probs=172.7
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCC-----CCcEEEECCCC-----------
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN----------- 160 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~i~~~~~~----------- 160 (652)
.|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++| ++|+|.++|.+
T Consensus 4 ~l~i~~v~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~ 83 (258)
T PRK14241 4 RIDVKDLNIYYGSFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAV 83 (258)
T ss_pred cEEEeeEEEEECCEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHH
Confidence 58999999999988899999999999999999999999999999999999974 79999998742
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHH
Q 006275 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (652)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (652)
..++|++|++.+++..|+++|+...+... . ........+.+
T Consensus 84 ~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~---------------~-----------------------~~~~~~~~~~~ 125 (258)
T PRK14241 84 RRTIGMVFQRPNPFPTMSIRDNVVAGLKLN---------------G-----------------------VRNKKDLDELV 125 (258)
T ss_pred hcceEEEccccccCCCCcHHHHHHHHHHhc---------------C-----------------------CCCHHHHHHHH
Confidence 24999999988877889999985321100 0 00011123345
Q ss_pred HHHhhhcCCC---cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 006275 240 SKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (652)
Q Consensus 240 ~~ll~~lgl~---~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsH 314 (652)
.++++.+|+. ....++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .++|||+|||
T Consensus 126 ~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH 205 (258)
T PRK14241 126 EKSLRGANLWNEVKDRLDKPGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTH 205 (258)
T ss_pred HHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEec
Confidence 5667777763 1356788999999999999999999999999999999999999999999888753 3689999999
Q ss_pred CHHHHHhhcCeEEEEc------CCeEEEecCChHHHH
Q 006275 315 DRAFLDQLCTKIVETE------MGVSRTYEGNYSQYV 345 (652)
Q Consensus 315 d~~~l~~~~d~ii~l~------~G~~~~~~g~~~~~~ 345 (652)
+++++.++||+|++++ +|++ .+.|+.+++.
T Consensus 206 ~~~~~~~~~d~i~~l~~~~~~~~g~i-~~~~~~~~~~ 241 (258)
T PRK14241 206 NMQQAARVSDQTAFFNLEATGKPGRL-VEIDDTEKIF 241 (258)
T ss_pred CHHHHHHhCCEEEEEecccCCCCceE-EecCCHHHHH
Confidence 9999999999999996 6877 4667766553
No 233
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=343.00 Aligned_cols=210 Identities=21% Similarity=0.293 Sum_probs=171.6
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC-----CCCcEEEECCCC---------
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN--------- 160 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~i~~~~~~--------- 160 (652)
...|+++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+++ |++|+|.++|.+
T Consensus 11 ~~~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~ 90 (260)
T PRK10744 11 PSKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIA 90 (260)
T ss_pred CceEEEEEEEEEeCCeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchH
Confidence 346999999999998889999999999999999999999999999999999986 589999998732
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHH
Q 006275 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (652)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (652)
.+|+|++|++.++. .|+++|+....... . ........+
T Consensus 91 ~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~--------------~------------------------~~~~~~~~~ 131 (260)
T PRK10744 91 LLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLF--------------E------------------------KLSRAEMDE 131 (260)
T ss_pred HHhcceEEEecCCccCc-CcHHHHHhhhHhhc--------------C------------------------CCCHHHHHH
Confidence 25999999987655 89999985321100 0 001111233
Q ss_pred HHHHHhhhcCCC---cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 006275 238 KVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (652)
Q Consensus 238 ~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIiv 312 (652)
++.++++.+|+. ....++.+.+||||||||++|||||+.+|++|||||||+|||+.+++.+.++|++ .+.|||++
T Consensus 132 ~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~ 211 (260)
T PRK10744 132 RVEWALTKAALWNEVKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIV 211 (260)
T ss_pred HHHHHHHHcCCChhhHHHHhcCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEE
Confidence 455667777763 1345778899999999999999999999999999999999999999999888753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 313 sHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
||+++++..+||+++++++|++. ..|+.+++
T Consensus 212 sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 242 (260)
T PRK10744 212 THNMQQAARCSDYTAFMYLGELI-EFGNTDTI 242 (260)
T ss_pred eCCHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 99999999999999999999984 55665554
No 234
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=338.25 Aligned_cols=207 Identities=24% Similarity=0.363 Sum_probs=173.8
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------ceEEEEec
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQ 168 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------~~i~~v~Q 168 (652)
+|+++|++++|++.. .++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|
T Consensus 1 ~l~~~~l~~~~~~~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 78 (232)
T PRK10771 1 MLKLTDITWLYHHLP--MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPVSMLFQ 78 (232)
T ss_pred CeEEEEEEEEECCcc--ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccEEEEec
Confidence 378999999998644 38999999999999999999999999999999999999999998753 35999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCC
Q 006275 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (652)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (652)
++.+++..|+.||+...+... .. .....+.++.++++.+|+
T Consensus 79 ~~~~~~~~tv~e~l~~~~~~~-------------~~--------------------------~~~~~~~~~~~~l~~~~l 119 (232)
T PRK10771 79 ENNLFSHLTVAQNIGLGLNPG-------------LK--------------------------LNAAQREKLHAIARQMGI 119 (232)
T ss_pred ccccccCCcHHHHHhcccccc-------------cC--------------------------CCHHHHHHHHHHHHHcCc
Confidence 998877889999985321100 00 000113456678888898
Q ss_pred CcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcC
Q 006275 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCT 324 (652)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d 324 (652)
. +..++++.+||||||||++||||++.+|++|||||||+|||+.+++.+.++|++ .|+|||++||+++++..+||
T Consensus 120 ~-~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d 198 (232)
T PRK10771 120 E-DLLARLPGQLSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAP 198 (232)
T ss_pred H-HHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCC
Confidence 6 578899999999999999999999999999999999999999999998887642 48899999999999999999
Q ss_pred eEEEEcCCeEEEecCChHHHHH
Q 006275 325 KIVETEMGVSRTYEGNYSQYVL 346 (652)
Q Consensus 325 ~ii~l~~G~~~~~~g~~~~~~~ 346 (652)
+|+++++|++. +.|+++++..
T Consensus 199 ~i~~l~~g~i~-~~g~~~~~~~ 219 (232)
T PRK10771 199 RSLVVADGRIA-WDGPTDELLS 219 (232)
T ss_pred EEEEEECCEEE-EeCCHHHHHh
Confidence 99999999984 6788766543
No 235
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=350.78 Aligned_cols=205 Identities=23% Similarity=0.290 Sum_probs=174.3
Q ss_pred EEEEEeeeeEeCCe-----eeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------
Q 006275 424 VVTIKNLEFGYEDR-----LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~~-----~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------- 489 (652)
+|+++|++++|++. .+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 48999999999743 5999999999999999999999999999999999999999999999865420
Q ss_pred -------------------------cceecccccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhc
Q 006275 490 -------------------------PNYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLD 538 (652)
Q Consensus 490 -------------------------~~~~~~~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~ 538 (652)
.+|++|+....+ +..|+.+|+.+.... ....++.++++.+|+..+..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l-~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~ 160 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQL-FEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQ 160 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCccccc-ccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 245666543333 457999999865321 113457889999999646789
Q ss_pred cCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeC
Q 006275 539 RKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKG 615 (652)
Q Consensus 539 ~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~ 615 (652)
+++.+|||||||||+|||||+.+|++|||||||++||+.++..+.+.|++. +.|||+||||++++..+||||++|++
T Consensus 161 ~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~vl~~ 240 (305)
T PRK13651 161 RSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTIFFKD 240 (305)
T ss_pred CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999998764 56999999999999999999999999
Q ss_pred CEEEeecCChhhHhh
Q 006275 616 SNLQDYAGDYNVCFT 630 (652)
Q Consensus 616 g~i~~~~g~~~~~~~ 630 (652)
|++. ..|++++...
T Consensus 241 G~i~-~~g~~~~~~~ 254 (305)
T PRK13651 241 GKII-KDGDTYDILS 254 (305)
T ss_pred CEEE-EECCHHHHhc
Confidence 9987 4577776543
No 236
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=340.87 Aligned_cols=210 Identities=20% Similarity=0.323 Sum_probs=171.7
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC--C---CCcEEEECCCC----------
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE--P---DSGNVIKAKSN---------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~--p---~~G~i~~~~~~---------- 160 (652)
+.|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++ | ++|+|.++|..
T Consensus 3 ~~l~~~nl~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~ 82 (252)
T PRK14256 3 NKVKLEQLNVHFGKNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVS 82 (252)
T ss_pred cEEEEEEEEEEeCCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHH
Confidence 35899999999998889999999999999999999999999999999999986 4 68999998732
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
..++|++|++.+++..|+.||+...+... . .......+.+
T Consensus 83 ~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~--------------~------------------------~~~~~~~~~~ 124 (252)
T PRK14256 83 IRRRVGMVFQKPNPFPAMSIYDNVIAGYKLN--------------G------------------------RVNRSEADEI 124 (252)
T ss_pred hhccEEEEecCCCCCCcCcHHHHHHhHHHhc--------------C------------------------CCCHHHHHHH
Confidence 24999999998877789999985321100 0 0000112234
Q ss_pred HHHHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006275 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (652)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (652)
+.++++.+|+.. +..++.+.+||||||||++|||||+.+|++|||||||+|||+.++.++.++|++ .++|||+||
T Consensus 125 ~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivs 204 (252)
T PRK14256 125 VESSLKRVALWDEVKDRLKSNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVT 204 (252)
T ss_pred HHHHHHHcCCchhhhHHhhCCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 556677777642 245677899999999999999999999999999999999999999999888753 368999999
Q ss_pred cCHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
|+++++..+|||++++++|++. ..|+.+++
T Consensus 205 H~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 234 (252)
T PRK14256 205 HNMQQAARVSDYTAFFYMGDLV-ECGETKKI 234 (252)
T ss_pred CCHHHHHhhCCEEEEEECCEEE-EeCCHHHH
Confidence 9999999999999999999974 55765554
No 237
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.1e-40 Score=337.07 Aligned_cols=197 Identities=26% Similarity=0.449 Sum_probs=166.5
Q ss_pred EEEEEeeeeEeCCe----eeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------
Q 006275 424 VVTIKNLEFGYEDR----LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~~----~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------- 489 (652)
+|+++||+++|+++ ++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 ~l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (228)
T cd03257 1 LLEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIR 80 (228)
T ss_pred CeEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHh
Confidence 47899999999765 7999999999999999999999999999999999999999999999997652
Q ss_pred ---cceecccccccCCCCCCHHHHHHHhhhh----ccH---HH-HHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHH
Q 006275 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED----WRI---DD-IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (652)
Q Consensus 490 ---~~~~~~~~~~~~~~~~tv~e~~~~~~~~----~~~---~~-~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral 558 (652)
.+|++|+....+.+..|+.+|+...... ... .. +.++++.+++.....++++.+|||||||||+|||||
T Consensus 81 ~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral 160 (228)
T cd03257 81 RKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPEEVLNRYPHELSGGQRQRVAIARAL 160 (228)
T ss_pred hccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCChhHhhCCchhcCHHHHHHHHHHHHH
Confidence 1234444322345678999998754211 111 12 247889999854567899999999999999999999
Q ss_pred ccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEe
Q 006275 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (652)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~ 620 (652)
+.+|++|||||||++||+.+++.+.+.|+++ +.|||+||||++++..+||++++|++|++..
T Consensus 161 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~ 226 (228)
T cd03257 161 ALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVE 226 (228)
T ss_pred hcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEe
Confidence 9999999999999999999999999999764 4699999999999999999999999999863
No 238
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-40 Score=343.00 Aligned_cols=212 Identities=18% Similarity=0.285 Sum_probs=173.1
Q ss_pred CCCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCC-----CCcEEEECCCC--------
Q 006275 94 ISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN-------- 160 (652)
Q Consensus 94 ~~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~i~~~~~~-------- 160 (652)
.++.|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 16 ~~~~l~~~nl~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~ 95 (267)
T PRK14235 16 TEIKMRARDVSVFYGEKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDV 95 (267)
T ss_pred CCceEEEEeEEEEECCEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccch
Confidence 34579999999999988899999999999999999999999999999999999975 89999998732
Q ss_pred ----ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHH
Q 006275 161 ----MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLD 236 (652)
Q Consensus 161 ----~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (652)
..++|++|++.+++ .|+.||+...... . .+. .......
T Consensus 96 ~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~-----------~-~~~-------------------------~~~~~~~ 137 (267)
T PRK14235 96 VELRARVGMVFQKPNPFP-KSIYENVAYGPRI-----------H-GLA-------------------------RSKAELD 137 (267)
T ss_pred HHHhhceEEEecCCCCCC-CcHHHHHHHHHHh-----------c-ccc-------------------------cchHHHH
Confidence 24899999987765 5999998532100 0 000 0001123
Q ss_pred HHHHHHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEE
Q 006275 237 AKVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVI 311 (652)
Q Consensus 237 ~~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIi 311 (652)
.++.++++.+|+.. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .+.|||+
T Consensus 138 ~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiii 217 (267)
T PRK14235 138 EIVETSLRKAGLWEEVKDRLHEPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVI 217 (267)
T ss_pred HHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEE
Confidence 34566777778742 245778999999999999999999999999999999999999999999988753 3689999
Q ss_pred EecCHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 312 ISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 312 vsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
+||+++++..+||++++|++|++. ..|+.+++
T Consensus 218 vtH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~ 249 (267)
T PRK14235 218 VTHSMQQAARVSQRTAFFHLGNLV-EVGDTEKM 249 (267)
T ss_pred EEcCHHHHHhhCCEEEEEECCEEE-EeCCHHHH
Confidence 999999999999999999999984 56765554
No 239
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.6e-40 Score=339.13 Aligned_cols=202 Identities=27% Similarity=0.418 Sum_probs=175.3
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-----------cce
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PNY 492 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~~ 492 (652)
+|+++|+++.|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 2 ~i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 81 (242)
T TIGR03411 2 ILYLEGLSVSFDGFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIGR 81 (242)
T ss_pred eEEEEeeEEEcCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCeeE
Confidence 689999999998888999999999999999999999999999999999999999999999997652 123
Q ss_pred ecccccccCCCCCCHHHHHHHhhhh--------------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHH
Q 006275 493 FEQNQAEALDLDKTVLETVAEAAED--------------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (652)
Q Consensus 493 ~~~~~~~~~~~~~tv~e~~~~~~~~--------------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral 558 (652)
.+|. ..+++..|+.+|+...... .....+.++++.+++. ...++++.+|||||||||+|||||
T Consensus 82 ~~q~--~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~Ge~qrv~laral 158 (242)
T TIGR03411 82 KFQK--PTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLA-DEADRLAGLLSHGQKQWLEIGMLL 158 (242)
T ss_pred eccc--cccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHH
Confidence 3333 3566778999999764210 0123577889999995 567899999999999999999999
Q ss_pred ccCCCeEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
+.+|++|||||||++||+.++..+.++|+++. .|||+|||+++++.++||++++|++|++. ..|+++++.
T Consensus 159 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~-~~~~~~~~~ 230 (242)
T TIGR03411 159 MQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVL-AEGSLDQVQ 230 (242)
T ss_pred hcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEE-eeCCHHHHh
Confidence 99999999999999999999999999998763 59999999999999999999999999997 457777664
No 240
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-40 Score=345.14 Aligned_cols=208 Identities=24% Similarity=0.364 Sum_probs=173.7
Q ss_pred ceEEEeEEEEeCC-eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC------------ceE
Q 006275 97 GVKLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------MKI 163 (652)
Q Consensus 97 ~i~v~~ls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------------~~i 163 (652)
+|+++|++++|++ .++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.. ..|
T Consensus 1 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 1 ILETRDLKYSYPDGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred CEEEEEEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 3789999999964 579999999999999999999999999999999999999999999998743 248
Q ss_pred EEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHH
Q 006275 164 AFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (652)
Q Consensus 164 ~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (652)
+|++|++. ..+..||.||+...... . .........++.++
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~--------------~-------------------------~~~~~~~~~~~~~~ 121 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLN--------------L-------------------------GLSKEEVEKRVKEA 121 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHH--------------c-------------------------CCCHHHHHHHHHHH
Confidence 99999973 33457999998521100 0 00011223456678
Q ss_pred hhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHH
Q 006275 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFL 319 (652)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l 319 (652)
++.+|+. +..++++.+|||||+||++|||||+.+|++|||||||+|||+.++..+.++|++ .|.|||++|||++++
T Consensus 122 l~~~~L~-~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~ 200 (275)
T PRK13639 122 LKAVGME-GFENKPPHHLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLV 200 (275)
T ss_pred HHHCCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHH
Confidence 8888986 577899999999999999999999999999999999999999999999888753 489999999999999
Q ss_pred HhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 320 DQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 320 ~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
..+||+|++|++|++. ..|+.+++.
T Consensus 201 ~~~~d~i~~l~~G~i~-~~g~~~~~~ 225 (275)
T PRK13639 201 PVYADKVYVMSDGKII-KEGTPKEVF 225 (275)
T ss_pred HHhCCEEEEEECCEEE-EeCCHHHHh
Confidence 9999999999999984 568766654
No 241
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.3e-40 Score=337.47 Aligned_cols=201 Identities=26% Similarity=0.401 Sum_probs=172.7
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-----------ccee
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PNYF 493 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~~~ 493 (652)
|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~ 80 (232)
T cd03218 1 LRAENLSKRYGKRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIGYL 80 (232)
T ss_pred CeEEEEEEEeCCEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEEEe
Confidence 47899999999889999999999999999999999999999999999999999999999997642 1234
Q ss_pred cccccccCCCCCCHHHHHHHhhhh--c----cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEE
Q 006275 494 EQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (652)
Q Consensus 494 ~~~~~~~~~~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlL 567 (652)
+|. ..+++..|+.+|+...... . ....+.++++.+++. +..++.+.+||||||||++|||||+.+|++|||
T Consensus 81 ~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~llll 157 (232)
T cd03218 81 PQE--ASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHIT-HLRKSKASSLSGGERRRVEIARALATNPKFLLL 157 (232)
T ss_pred cCC--ccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEe
Confidence 443 3456678999999764321 1 123467889999995 677899999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 568 DEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 568 DEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
||||++||+.+++.+.++|++. +.|||++|||++++..+||++++|++|++. ..|+.++..
T Consensus 158 DEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 221 (232)
T cd03218 158 DEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVL-AEGTPEEIA 221 (232)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEE-EEeCHHHhh
Confidence 9999999999999999998764 459999999999999999999999999997 457766653
No 242
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2e-40 Score=352.20 Aligned_cols=213 Identities=20% Similarity=0.358 Sum_probs=175.6
Q ss_pred CCceEEEeEEEEeC----CeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCC---CcEEEECCCC-------
Q 006275 95 SSGVKLENISKSYK----GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD---SGNVIKAKSN------- 160 (652)
Q Consensus 95 ~~~i~v~~ls~~y~----~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~---~G~i~~~~~~------- 160 (652)
++.|+++|+++.|+ ..++|+||||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.+
T Consensus 10 ~~~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~ 89 (330)
T PRK09473 10 DALLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEK 89 (330)
T ss_pred CceEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHH
Confidence 45799999999995 256999999999999999999999999999999999999996 9999998753
Q ss_pred -------ceEEEEeccC--ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCC
Q 006275 161 -------MKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVN 231 (652)
Q Consensus 161 -------~~i~~v~Q~~--~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (652)
..|+|++|++ .+.+.+|+.+++...+... ....
T Consensus 90 ~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~--------------------------------------~~~~ 131 (330)
T PRK09473 90 ELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLH--------------------------------------KGMS 131 (330)
T ss_pred HHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHh--------------------------------------cCCC
Confidence 2599999998 4667789998875321000 0011
Q ss_pred hhcHHHHHHHHhhhcCCCc--ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cC
Q 006275 232 LDTLDAKVSKLMPELGFTA--DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQ 305 (652)
Q Consensus 232 ~~~~~~~i~~ll~~lgl~~--~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~ 305 (652)
..+...++.++++.+|+.. ...++++.+|||||+|||+|||||+.+|++||+||||++||+.++..+.++|+ +.
T Consensus 132 ~~~~~~~~~~~L~~vgL~~~~~~~~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~ 211 (330)
T PRK09473 132 KAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREF 211 (330)
T ss_pred HHHHHHHHHHHHHHcCCCChHHHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHc
Confidence 1123345667788888863 23567899999999999999999999999999999999999999999988764 34
Q ss_pred CCeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHHH
Q 006275 306 DVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVL 346 (652)
Q Consensus 306 g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~~ 346 (652)
|.|+|+||||++.+.++||+|++|.+|++ +..|+.+++..
T Consensus 212 g~til~iTHdl~~~~~~~Dri~vm~~G~i-ve~g~~~~i~~ 251 (330)
T PRK09473 212 NTAIIMITHDLGVVAGICDKVLVMYAGRT-MEYGNARDVFY 251 (330)
T ss_pred CCEEEEEECCHHHHHHhCCEEEEEECCEE-EEECCHHHHHh
Confidence 89999999999999999999999999998 46787666543
No 243
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1.3e-40 Score=335.64 Aligned_cols=199 Identities=31% Similarity=0.457 Sum_probs=171.0
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC------ceEEEEeccCc
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------MKIAFLSQEFE 171 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------~~i~~v~Q~~~ 171 (652)
|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|++|++.
T Consensus 1 l~l~~v~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~~~~~~~~~q~~~ 80 (223)
T TIGR03740 1 LETKNLSKRFGKQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKDLHKIGSLIESPP 80 (223)
T ss_pred CEEEeEEEEECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccccccEEEEcCCCC
Confidence 478999999998889999999999999999999999999999999999999999999998743 36999999988
Q ss_pred cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcc
Q 006275 172 VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTAD 251 (652)
Q Consensus 172 ~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~ 251 (652)
+++..|+++|+..... +. .. .+.++.++++.+|+. +
T Consensus 81 ~~~~~t~~~~~~~~~~---------------~~------------------------~~----~~~~~~~~l~~~~l~-~ 116 (223)
T TIGR03740 81 LYENLTARENLKVHTT---------------LL------------------------GL----PDSRIDEVLNIVDLT-N 116 (223)
T ss_pred ccccCCHHHHHHHHHH---------------Hc------------------------CC----CHHHHHHHHHHcCCc-H
Confidence 8778899999742110 00 00 023455678888886 5
Q ss_pred cccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCeEEE
Q 006275 252 DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTKIVE 328 (652)
Q Consensus 252 ~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~d~ii~ 328 (652)
..++.+.+|||||+||++||||++.+|++|||||||+|||+.+++.+.++|+ +.|.|||++|||++++..+||+|++
T Consensus 117 ~~~~~~~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~ 196 (223)
T TIGR03740 117 TGKKKAKQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGI 196 (223)
T ss_pred HHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEE
Confidence 6788899999999999999999999999999999999999999999988874 3578999999999999999999999
Q ss_pred EcCCeEEEecCCh
Q 006275 329 TEMGVSRTYEGNY 341 (652)
Q Consensus 329 l~~G~~~~~~g~~ 341 (652)
+++|++. ..|+.
T Consensus 197 l~~g~i~-~~~~~ 208 (223)
T TIGR03740 197 ISEGVLG-YQGKI 208 (223)
T ss_pred EeCCEEE-EecCh
Confidence 9999984 45553
No 244
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-40 Score=345.98 Aligned_cols=208 Identities=23% Similarity=0.362 Sum_probs=174.8
Q ss_pred CceEEEeEEEEeCC--eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceE
Q 006275 96 SGVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKI 163 (652)
Q Consensus 96 ~~i~v~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i 163 (652)
++|+++|+++.|++ +++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.. ..|
T Consensus 4 ~~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 4 EIIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred ceEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 36999999999974 469999999999999999999999999999999999999999999998853 259
Q ss_pred EEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHH
Q 006275 164 AFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (652)
Q Consensus 164 ~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (652)
+|++|++. .++..||.||+....... .....+...++.++
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~---------------------------------------~~~~~~~~~~~~~~ 124 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENI---------------------------------------GVPREEMVERVDQA 124 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhC---------------------------------------CCCHHHHHHHHHHH
Confidence 99999984 556789999985321000 00111223456778
Q ss_pred hhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHH
Q 006275 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAF 318 (652)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~ 318 (652)
++.+|+. +..++.+.+|||||||||+|||||+.+|++|||||||+|||+.++..+.++|++ .|.|||++||++++
T Consensus 125 l~~~gL~-~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~ 203 (279)
T PRK13635 125 LRQVGME-DFLNREPHRLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDE 203 (279)
T ss_pred HHHcCCh-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHH
Confidence 8888986 678889999999999999999999999999999999999999999999988752 38999999999999
Q ss_pred HHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 319 LDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 319 l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
+. .||+|+++++|++ .+.|+.+++.
T Consensus 204 ~~-~~d~i~~l~~G~i-~~~g~~~~~~ 228 (279)
T PRK13635 204 AA-QADRVIVMNKGEI-LEEGTPEEIF 228 (279)
T ss_pred HH-cCCEEEEEECCEE-EEECCHHHHh
Confidence 96 5999999999997 4678766554
No 245
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-40 Score=351.62 Aligned_cols=208 Identities=24% Similarity=0.406 Sum_probs=178.4
Q ss_pred CcEEEEEeeeeEeCC----------eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--
Q 006275 422 RSVVTIKNLEFGYED----------RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-- 489 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~----------~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-- 489 (652)
.++|+++||++.|+. ..+|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 3 ~~~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~ 82 (327)
T PRK11308 3 QPLLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKA 82 (327)
T ss_pred CceEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcC
Confidence 457999999999962 47899999999999999999999999999999999999999999999998752
Q ss_pred -----------cceecccccccCCCCCCHHHHHHHhhhh-------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHH
Q 006275 490 -----------PNYFEQNQAEALDLDKTVLETVAEAAED-------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKAR 551 (652)
Q Consensus 490 -----------~~~~~~~~~~~~~~~~tv~e~~~~~~~~-------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqr 551 (652)
.++++|+....+++.+++.+++...... .....+.++|+.+|+.....++++.+||||||||
T Consensus 83 ~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p~~LSgGq~QR 162 (327)
T PRK11308 83 DPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEHYDRYPHMFSGGQRQR 162 (327)
T ss_pred CHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHHhcCCCccCCHHHHHH
Confidence 2356666544577888999888643211 1134578899999996556799999999999999
Q ss_pred HHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhh
Q 006275 552 LAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNV 627 (652)
Q Consensus 552 v~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~ 627 (652)
|+|||||+.+|+|||+||||++||..++..+.++|.++ +.|||+||||+..+.++||||++|++|++++ .|+.++
T Consensus 163 v~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive-~g~~~~ 241 (327)
T PRK11308 163 IAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVE-KGTKEQ 241 (327)
T ss_pred HHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCHHH
Confidence 99999999999999999999999999999999988754 5699999999999999999999999999985 476666
Q ss_pred Hhh
Q 006275 628 CFT 630 (652)
Q Consensus 628 ~~~ 630 (652)
+++
T Consensus 242 ~~~ 244 (327)
T PRK11308 242 IFN 244 (327)
T ss_pred Hhc
Confidence 543
No 246
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.1e-40 Score=341.30 Aligned_cols=206 Identities=23% Similarity=0.344 Sum_probs=176.0
Q ss_pred CcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc------------
Q 006275 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------ 489 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------ 489 (652)
+..|+++||++.|+++.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 3 ~~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 82 (257)
T PRK10619 3 ENKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVA 82 (257)
T ss_pred CccEEEeeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccccc
Confidence 45699999999999889999999999999999999999999999999999999999999999997652
Q ss_pred -----------cceecccccccCCCCCCHHHHHHHhhh-------hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHH
Q 006275 490 -----------PNYFEQNQAEALDLDKTVLETVAEAAE-------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKAR 551 (652)
Q Consensus 490 -----------~~~~~~~~~~~~~~~~tv~e~~~~~~~-------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqr 551 (652)
.+|++|+ ..+++..|+.+|+..... .....++.++++.+|+.....++++.+||||||||
T Consensus 83 ~~~~~~~~~~~i~~v~q~--~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~G~~qr 160 (257)
T PRK10619 83 DKNQLRLLRTRLTMVFQH--FNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQR 160 (257)
T ss_pred cchHHHHHhhceEEEecC--cccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHH
Confidence 1233433 345566899999975321 11124577899999996433488899999999999
Q ss_pred HHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhH
Q 006275 552 LAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVC 628 (652)
Q Consensus 552 v~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~ 628 (652)
++|||||+.+|++|||||||++||+.+++.+.++|+++ +.|||+||||++++..+||||++|++|+++ +.|+++++
T Consensus 161 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 239 (257)
T PRK10619 161 VSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIE-EEGAPEQL 239 (257)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHh
Confidence 99999999999999999999999999999999998765 469999999999999999999999999998 45887776
Q ss_pred hh
Q 006275 629 FT 630 (652)
Q Consensus 629 ~~ 630 (652)
..
T Consensus 240 ~~ 241 (257)
T PRK10619 240 FG 241 (257)
T ss_pred hh
Confidence 54
No 247
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-40 Score=343.33 Aligned_cols=210 Identities=20% Similarity=0.286 Sum_probs=169.5
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC-----CCCcEEEECCCC---------
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN--------- 160 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~i~~~~~~--------- 160 (652)
.++|+++|++++|+++++|+++||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|..
T Consensus 19 ~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 19 EHILEVKDLSIYYGEKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred CceEEEEEEEEEeCCceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 346999999999998889999999999999999999999999999999999864 789999987632
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHH
Q 006275 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (652)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (652)
..++|++|++.+++ .|+++|+...+... . . ......+.
T Consensus 99 ~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---------------~--~---------------------~~~~~~~~ 139 (268)
T PRK14248 99 NLRREIGMVFQKPNPFP-KSIYNNITHALKYA---------------G--E---------------------RRKSVLDE 139 (268)
T ss_pred HHhccEEEEecCCccCc-ccHHHHHHHHHHhc---------------C--C---------------------CcHHHHHH
Confidence 25999999987765 59999986321100 0 0 00001122
Q ss_pred HHHHHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 006275 238 KVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (652)
Q Consensus 238 ~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIiv 312 (652)
.+.++++.+++.. ...++++.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|++ .+.|||++
T Consensus 140 ~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~ 219 (268)
T PRK14248 140 IVEESLTKAALWDEVKDRLHSSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIV 219 (268)
T ss_pred HHHHHHHHcCCCcchHHHHhcCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 3344555666531 345788999999999999999999999999999999999999999999988753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 313 sHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
||+++++..+||+|++|++|++. +.|+.+++
T Consensus 220 tH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~ 250 (268)
T PRK14248 220 THNMQQALRVSDRTAFFLNGDLV-EYDQTEQI 250 (268)
T ss_pred EeCHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 99999999999999999999984 56766554
No 248
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.2e-40 Score=383.70 Aligned_cols=211 Identities=30% Similarity=0.488 Sum_probs=184.2
Q ss_pred CCCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccC-cc
Q 006275 94 ISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEF-EV 172 (652)
Q Consensus 94 ~~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~-~~ 172 (652)
...+|+++|++++|+++++|+++||+|++|+++||+|||||||||||++|+|+++|++|+|.+ |....|||++|++ .+
T Consensus 316 ~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~~i~y~~q~~~~l 394 (635)
T PRK11147 316 GKIVFEMENVNYQIDGKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKLEVAYFDQHRAEL 394 (635)
T ss_pred CCceEEEeeeEEEECCeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCcEEEEEeCccccc
Confidence 345799999999999888999999999999999999999999999999999999999999998 5667899999986 46
Q ss_pred CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCccc
Q 006275 173 SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADD 252 (652)
Q Consensus 173 ~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~ 252 (652)
++..||.+|+...... .........+.+++..+|+..+.
T Consensus 395 ~~~~tv~e~l~~~~~~-----------------------------------------~~~~~~~~~~~~~l~~~~l~~~~ 433 (635)
T PRK11147 395 DPEKTVMDNLAEGKQE-----------------------------------------VMVNGRPRHVLGYLQDFLFHPKR 433 (635)
T ss_pred CCCCCHHHHHHhhccc-----------------------------------------ccccchHHHHHHHHHhcCCCHHH
Confidence 6778999998532100 00000123456778888986556
Q ss_pred ccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEc-C
Q 006275 253 GDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETE-M 331 (652)
Q Consensus 253 ~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~ii~l~-~ 331 (652)
.++++.+|||||||||+|||||+.+|++|||||||+|||+.++..|.++|++.+.|||+||||++++..+||+|++++ +
T Consensus 434 ~~~~~~~LSgGekqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vSHd~~~~~~~~d~i~~l~~~ 513 (635)
T PRK11147 434 AMTPVKALSGGERNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSYQGTVLLVSHDRQFVDNTVTECWIFEGN 513 (635)
T ss_pred HhChhhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCCCeEEEEECCHHHHHHhcCEEEEEeCC
Confidence 788999999999999999999999999999999999999999999999998887899999999999999999999997 8
Q ss_pred CeEEEecCChHHHHH
Q 006275 332 GVSRTYEGNYSQYVL 346 (652)
Q Consensus 332 G~~~~~~g~~~~~~~ 346 (652)
|++..|.|+|++|..
T Consensus 514 g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 514 GKIGRYVGGYHDARQ 528 (635)
T ss_pred CeEEEccCCHHHHHH
Confidence 999999999999964
No 249
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=347.59 Aligned_cols=205 Identities=25% Similarity=0.354 Sum_probs=174.3
Q ss_pred EEEEEeeeeEeCC-----eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------
Q 006275 424 VVTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~-----~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------- 489 (652)
.|+++||+++|++ +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 3899999999963 36999999999999999999999999999999999999999999999997752
Q ss_pred -----cceecccccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHH
Q 006275 490 -----PNYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (652)
Q Consensus 490 -----~~~~~~~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral 558 (652)
.+|++|+....++ ..|+.+|+.+.... .....+.++++.+|+..+..++++.+||||||||++|||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~-~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~laraL 160 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLF-EDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSIL 160 (286)
T ss_pred HHHhheEEEecChHhccc-hhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHH
Confidence 2455665322333 45999999865321 11245678899999964667899999999999999999999
Q ss_pred ccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+||||++|++|++. ..|++++.+.
T Consensus 161 ~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~-~~g~~~~~~~ 235 (286)
T PRK13646 161 AMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIV-SQTSPKELFK 235 (286)
T ss_pred HhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EECCHHHHHh
Confidence 9999999999999999999999999999864 469999999999999999999999999997 4577776543
No 250
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-40 Score=344.55 Aligned_cols=201 Identities=28% Similarity=0.400 Sum_probs=173.4
Q ss_pred EEEEEeeeeEeC-CeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------cce
Q 006275 424 VVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNY 492 (652)
Q Consensus 424 ~i~~~~v~~~y~-~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~ 492 (652)
+|+++|+++.|+ ++.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 4 ~l~~~~l~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 83 (274)
T PRK13647 4 IIEVEDLHFRYKDGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVGL 83 (274)
T ss_pred eEEEEEEEEEeCCCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEEE
Confidence 699999999996 567999999999999999999999999999999999999999999999998752 245
Q ss_pred ecccccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEE
Q 006275 493 FEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (652)
Q Consensus 493 ~~~~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLl 566 (652)
++|+.. ...+..|+.+|+.+.... .....+.++++.+++. +..++++.+|||||||||+|||||+.+|++||
T Consensus 84 v~q~~~-~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~~qrv~laraL~~~p~lll 161 (274)
T PRK13647 84 VFQDPD-DQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMW-DFRDKPPYHLSYGQKKRVAIAGVLAMDPDVIV 161 (274)
T ss_pred EecChh-hhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCH-HHhcCChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 555432 233467999999864321 1124577889999994 67899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhh
Q 006275 567 LDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNV 627 (652)
Q Consensus 567 LDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~ 627 (652)
|||||++||+.++..+.++|+++ +.|||+||||++++.++|||+++|++|++.. .|++++
T Consensus 162 lDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~ 224 (274)
T PRK13647 162 LDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLA-EGDKSL 224 (274)
T ss_pred EECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCHHH
Confidence 99999999999999999999765 4699999999999999999999999999974 566654
No 251
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.2e-40 Score=341.34 Aligned_cols=207 Identities=22% Similarity=0.323 Sum_probs=175.2
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECcee-----cc--------
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHN-----VL-------- 489 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~-----~~-------- 489 (652)
.+|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ +.
T Consensus 5 ~~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~~ 84 (258)
T PRK11701 5 PLLSVRGLTKLYGPRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAERR 84 (258)
T ss_pred ceEEEeeeEEEcCCceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHHH
Confidence 47999999999988889999999999999999999999999999999999999999999999976 31
Q ss_pred ------cceecccccccCCCCCCHHHHHHHhhh---h----ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHH
Q 006275 490 ------PNYFEQNQAEALDLDKTVLETVAEAAE---D----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCK 556 (652)
Q Consensus 490 ------~~~~~~~~~~~~~~~~tv~e~~~~~~~---~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAr 556 (652)
.+|++|+....+.+..++.+|+..... . .....+.++++.+++.....++.+.+||||||||++|||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~Gq~qrl~lar 164 (258)
T PRK11701 85 RLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDAARIDDLPTTFSGGMQQRLQIAR 164 (258)
T ss_pred HHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCChhHHhCCCccCCHHHHHHHHHHH
Confidence 235555543345566788888764321 0 112346788999998544678999999999999999999
Q ss_pred HHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||+.+|+||||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++ +.|+++++..
T Consensus 165 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~-~~~~~~~~~~ 241 (258)
T PRK11701 165 NLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVV-ESGLTDQVLD 241 (258)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHHhc
Confidence 999999999999999999999999999998753 569999999999999999999999999997 4577776643
No 252
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-40 Score=343.07 Aligned_cols=205 Identities=29% Similarity=0.394 Sum_probs=176.0
Q ss_pred CCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------c
Q 006275 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------P 490 (652)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~ 490 (652)
++++|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 8 ~~~~l~i~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 8 SDTTFALRNVSFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred CCceEEEeeEEEEECCEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 456799999999998889999999999999999999999999999999999999999999999997652 2
Q ss_pred ceecccccccCCCCCCHHHHHHHhhh----------hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHcc
Q 006275 491 NYFEQNQAEALDLDKTVLETVAEAAE----------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (652)
Q Consensus 491 ~~~~~~~~~~~~~~~tv~e~~~~~~~----------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~ 560 (652)
+|++|. ..+.+..|+.+|+..... ......+.++++.+++. +..++++.+|||||||||+|||||+.
T Consensus 88 ~~v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~laral~~ 164 (265)
T PRK10575 88 AYLPQQ--LPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLK-PLAHRLVDSLSGGERQRAWIAMLVAQ 164 (265)
T ss_pred EEeccC--CCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCH-HHhcCCcccCCHHHHHHHHHHHHHhc
Confidence 344443 245567899999976421 01123577899999994 67899999999999999999999999
Q ss_pred CCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 561 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
+|+||||||||++||+.+++.+.++|.++ +.|||+||||++++.++||++++|++|++. ..|+.+++.
T Consensus 165 ~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~-~~~~~~~~~ 236 (265)
T PRK10575 165 DSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMI-AQGTPAELM 236 (265)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEE-EecCHHHhc
Confidence 99999999999999999999999998754 469999999999999999999999999997 456666543
No 253
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.4e-40 Score=335.04 Aligned_cols=200 Identities=28% Similarity=0.405 Sum_probs=169.9
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-----------ccee
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PNYF 493 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~~~ 493 (652)
|+++||+++|+++++|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~ 80 (222)
T cd03224 1 LEVENLNAGYGKSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIGYV 80 (222)
T ss_pred CEEeeEEeecCCeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeEEe
Confidence 57899999999888999999999999999999999999999999999999999999999997652 1244
Q ss_pred cccccccCCCCCCHHHHHHHhhhhc----cHHHHHHHHhhC-CCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEe
Q 006275 494 EQNQAEALDLDKTVLETVAEAAEDW----RIDDIKGLLGRC-NFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLD 568 (652)
Q Consensus 494 ~~~~~~~~~~~~tv~e~~~~~~~~~----~~~~~~~~L~~~-~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLD 568 (652)
+|. ..+++.+|+.+|+....... ....+.++++.+ ++ ....++++.+||||||||++|||||+.+|++||||
T Consensus 81 ~q~--~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l-~~~~~~~~~~LS~G~~qrv~laral~~~p~llllD 157 (222)
T cd03224 81 PEG--RRIFPELTVEENLLLGAYARRRAKRKARLERVYELFPRL-KERRKQLAGTLSGGEQQMLAIARALMSRPKLLLLD 157 (222)
T ss_pred ccc--cccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHHhh-hhhhhCchhhCCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 443 34667789999997653221 123355677777 45 45678999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhH
Q 006275 569 EPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVC 628 (652)
Q Consensus 569 EPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~ 628 (652)
|||++||+.++..+.+.|+++ +.|||++|||++++..+||++++|++|++.. .|+.++.
T Consensus 158 EPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 219 (222)
T cd03224 158 EPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVL-EGTAAEL 219 (222)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEE-eCCHHHH
Confidence 999999999999999999865 4699999999999999999999999999974 4666554
No 254
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.3e-40 Score=333.16 Aligned_cols=191 Identities=28% Similarity=0.434 Sum_probs=166.1
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc------------cce
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------PNY 492 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------~~~ 492 (652)
|+++|+++.|+++.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 1 l~~~~l~~~~~~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~ 80 (213)
T cd03262 1 IEIKNLHKSFGDFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKVGM 80 (213)
T ss_pred CEEEEEEEEECCeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcceE
Confidence 47899999999889999999999999999999999999999999999999999999999998652 124
Q ss_pred ecccccccCCCCCCHHHHHHHhhh---hc----cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeE
Q 006275 493 FEQNQAEALDLDKTVLETVAEAAE---DW----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (652)
Q Consensus 493 ~~~~~~~~~~~~~tv~e~~~~~~~---~~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lL 565 (652)
++|. ..+++..|+.+|+..... .. ....+.++++.+++. ...++++.+||||||||++|||||+.+|++|
T Consensus 81 ~~q~--~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 157 (213)
T cd03262 81 VFQQ--FNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLA-DKADAYPAQLSGGQQQRVAIARALAMNPKVM 157 (213)
T ss_pred Eecc--cccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCH-hHhhhCccccCHHHHHHHHHHHHHhcCCCEE
Confidence 4443 345667899999876421 11 123567889999995 5679999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEE
Q 006275 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (652)
Q Consensus 566 lLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i 618 (652)
||||||+|||+.+++.+.+.|+++ +.|||++|||++++.++||++++|++|++
T Consensus 158 llDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 158 LFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999865 46999999999999999999999999874
No 255
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.5e-40 Score=334.34 Aligned_cols=199 Identities=26% Similarity=0.381 Sum_probs=171.4
Q ss_pred EEEEeeeeEeCC--eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------ccee
Q 006275 425 VTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYF 493 (652)
Q Consensus 425 i~~~~v~~~y~~--~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~~~ 493 (652)
|+++||++.|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~v 80 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGYC 80 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEEe
Confidence 578999999986 78999999999999999999999999999999999999999999999998752 2344
Q ss_pred cccccccCCCCCCHHHHHHHhhhh--c----cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEE
Q 006275 494 EQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (652)
Q Consensus 494 ~~~~~~~~~~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlL 567 (652)
.|+ ..+++..|+.+|+...... . ....+.++++.+++. +..++++.+||||||||++|||||+.+|++|||
T Consensus 81 ~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llll 157 (220)
T cd03263 81 PQF--DALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLT-DKANKRARTLSGGMKRKLSLAIALIGGPSVLLL 157 (220)
T ss_pred cCc--CCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-HHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 543 3455678999999764321 1 123567889999994 667899999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhh
Q 006275 568 DEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNV 627 (652)
Q Consensus 568 DEPt~~LD~~~~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~ 627 (652)
||||++||+.+++.+.++|+++. .|||++|||++++..+||++++|++|++.. .|++++
T Consensus 158 DEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~-~~~~~~ 218 (220)
T cd03263 158 DEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRC-IGSPQE 218 (220)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEe-cCCHHH
Confidence 99999999999999999998753 599999999999999999999999999974 465543
No 256
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-40 Score=338.82 Aligned_cols=210 Identities=18% Similarity=0.269 Sum_probs=171.4
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcC---CCC--CCcEEEECCCC----------
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQ---EEP--DSGNVIKAKSN---------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~---~~p--~~G~i~~~~~~---------- 160 (652)
++|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+ ++| ++|+|.++|.+
T Consensus 2 ~~l~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 81 (250)
T PRK14245 2 VKIDARDVNFWYGDFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDE 81 (250)
T ss_pred cEEEEEEEEEEECCEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHH
Confidence 358999999999988899999999999999999999999999999999997 455 58999998742
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
..++|++|++.++. .|+.+|+...+... . .......++.
T Consensus 82 ~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~---------------~-----------------------~~~~~~~~~~ 122 (250)
T PRK14245 82 LRKNVGMVFQRPNPFP-KSIFENVAYGLRVN---------------G-----------------------VKDNAFIRQR 122 (250)
T ss_pred HhhheEEEecCCccCc-ccHHHHHHHHHHHc---------------C-----------------------CCcHHHHHHH
Confidence 14999999987765 69999985321100 0 0000012334
Q ss_pred HHHHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006275 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (652)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (652)
+.++++.+|+.. ...++++.+||||||||++|||||+.+|++|||||||+|||+.++.++.++|++ .++|||+||
T Consensus 123 ~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivt 202 (250)
T PRK14245 123 VEETLKGAALWDEVKDKLKESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVT 202 (250)
T ss_pred HHHHHHHcCCCcchhhhhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 556777778742 245778899999999999999999999999999999999999999999988753 478999999
Q ss_pred cCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
|+++++.++||+|++|++|++ ...|+.+++.
T Consensus 203 H~~~~~~~~~d~v~~l~~G~~-~~~~~~~~~~ 233 (250)
T PRK14245 203 HNMQQAARVSDKTAFFYMGEM-VEYDDTKKIF 233 (250)
T ss_pred CCHHHHHhhCCEEEEEECCEE-EEECCHHHHh
Confidence 999999999999999999998 4667766653
No 257
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.9e-40 Score=334.12 Aligned_cols=194 Identities=26% Similarity=0.412 Sum_probs=168.1
Q ss_pred EEEEEeeeeEe-CCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-------------
Q 006275 424 VVTIKNLEFGY-EDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y-~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------- 489 (652)
+|+++|+++.| +++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 1 MIRFEHVSKAYLGGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred CEEEEeeEEEecCCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 47899999999 6678999999999999999999999999999999999999999999999997652
Q ss_pred cceecccccccCCCCCCHHHHHHHhhhh--c----cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCC
Q 006275 490 PNYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (652)
Q Consensus 490 ~~~~~~~~~~~~~~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~ 563 (652)
.+|++|. ..+++..|+.+|+...... . ....+.++++.+++. +..++++.+||||||||++|||||+.+|+
T Consensus 81 i~~~~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~ 157 (222)
T PRK10908 81 IGMIFQD--HHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLL-DKAKNFPIQLSGGEQQRVGIARAVVNKPA 157 (222)
T ss_pred eEEEecC--ccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCh-hhhhCCchhCCHHHHHHHHHHHHHHcCCC
Confidence 1244443 3455778999999764211 1 123467889999995 56789999999999999999999999999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEe
Q 006275 564 LLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (652)
Q Consensus 564 lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~ 620 (652)
+|||||||++||+.+++.+.+.|+++ +.|||+||||++++..+||++++|++|+++.
T Consensus 158 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 158 VLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999998865 4699999999999999999999999999864
No 258
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=2e-40 Score=343.23 Aligned_cols=208 Identities=22% Similarity=0.334 Sum_probs=174.8
Q ss_pred CcEEEEEeeeeEeCC---------eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---
Q 006275 422 RSVVTIKNLEFGYED---------RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--- 489 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~---------~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--- 489 (652)
+++|+++||+++|+. +++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 2 ~~~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~ 81 (267)
T PRK15112 2 ETLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGD 81 (267)
T ss_pred cceEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCc
Confidence 357999999999962 46999999999999999999999999999999999999999999999997652
Q ss_pred -------cceecccccccCCCCCCHHHHHHHhhhh-------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHH
Q 006275 490 -------PNYFEQNQAEALDLDKTVLETVAEAAED-------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFC 555 (652)
Q Consensus 490 -------~~~~~~~~~~~~~~~~tv~e~~~~~~~~-------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LA 555 (652)
.+|++|+....+.+..|+.+++...... ...+.+.++++.+++.....++++.+|||||||||+||
T Consensus 82 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~la 161 (267)
T PRK15112 82 YSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASYYPHMLAPGQKQRLGLA 161 (267)
T ss_pred hhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhcCchhcCHHHHHHHHHH
Confidence 1344444322245567888887643211 11235778899999954567888999999999999999
Q ss_pred HHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
|||+.+|+||||||||++||+.++..+.+.|.++ +.|||+|||+++++..+||++++|++|++. ..|+++++.+
T Consensus 162 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 239 (267)
T PRK15112 162 RALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVV-ERGSTADVLA 239 (267)
T ss_pred HHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE-ecCCHHHHhc
Confidence 9999999999999999999999999999998864 569999999999999999999999999997 4677777654
No 259
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.9e-41 Score=327.37 Aligned_cols=207 Identities=25% Similarity=0.484 Sum_probs=183.9
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCc------eEEEEeccC
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM------KIAFLSQEF 170 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~------~i~~v~Q~~ 170 (652)
++++++|+++|+++.+++|+||+|++|++.|++|+|||||||.+|+|+|+++|++|+|.++|.+. +|||+|.+-
T Consensus 2 ~L~ie~vtK~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~~G~I~~~g~~~~~~~~~rIGyLPEER 81 (300)
T COG4152 2 ALEIEGVTKSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPTEGEITWNGGPLSQEIKNRIGYLPEER 81 (300)
T ss_pred ceEEecchhccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCccCceEEEcCcchhhhhhhhcccChhhh
Confidence 48999999999999999999999999999999999999999999999999999999999998543 699999999
Q ss_pred ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCc
Q 006275 171 EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTA 250 (652)
Q Consensus 171 ~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~ 250 (652)
.+++.+||.|.+.. |.. + ..++..++..++..+|+++++.
T Consensus 82 GLy~k~tv~dql~y-la~--------------L------------------------kGm~~~e~~~~~~~wLer~~i~- 121 (300)
T COG4152 82 GLYPKMTVEDQLKY-LAE--------------L------------------------KGMPKAEIQKKLQAWLERLEIV- 121 (300)
T ss_pred ccCccCcHHHHHHH-HHH--------------h------------------------cCCcHHHHHHHHHHHHHhcccc-
Confidence 99999999998742 100 1 1244456677888899999997
Q ss_pred ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHH---ccCCCeEEEEecCHHHHHhhcCeEE
Q 006275 251 DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL---GKQDVPMVIISHDRAFLDQLCTKIV 327 (652)
Q Consensus 251 ~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L---~~~g~tvIivsHd~~~l~~~~d~ii 327 (652)
....+++.+||-|++|++.+..+++++|+++|||||||||||...+.|.+.+ ++.|.|||++||.++.+.++||+++
T Consensus 122 ~~~~~kIk~LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me~vEeLCD~ll 201 (300)
T COG4152 122 GKKTKKIKELSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRMEHVEELCDRLL 201 (300)
T ss_pred ccccchHHHhhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHHHHHHHhhhhh
Confidence 5677889999999999999999999999999999999999999999998764 6789999999999999999999999
Q ss_pred EEcCCeEEEecCChHHH
Q 006275 328 ETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 328 ~l~~G~~~~~~g~~~~~ 344 (652)
.|+.|.. +..|+..+.
T Consensus 202 mL~kG~~-V~~G~v~~i 217 (300)
T COG4152 202 MLKKGQT-VLYGTVEDI 217 (300)
T ss_pred eecCCce-EEeccHHHH
Confidence 9999987 467876554
No 260
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-40 Score=338.05 Aligned_cols=203 Identities=26% Similarity=0.404 Sum_probs=173.9
Q ss_pred EEEEeeeeEeCC-eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------ccee
Q 006275 425 VTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (652)
Q Consensus 425 i~~~~v~~~y~~-~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~~ 493 (652)
++++|++++|++ +.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (242)
T cd03295 1 IEFENVTKRYGGGKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGYV 80 (242)
T ss_pred CEEEEEEEEeCCcceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEEE
Confidence 478999999987 78999999999999999999999999999999999999999999999997652 1344
Q ss_pred cccccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCCh-hhhccCcCCCCHHHHHHHHHHHHHccCCCeEE
Q 006275 494 EQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKA-DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (652)
Q Consensus 494 ~~~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~-~~~~~~~~~LSgGqrqrv~LAral~~~p~lLl 566 (652)
+|. ..+++..|+.+|+...... .....+.++++.+++.. ...++++.+|||||||||+|||||+.+|++||
T Consensus 81 ~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~lll 158 (242)
T cd03295 81 IQQ--IGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADPPLLL 158 (242)
T ss_pred ccC--ccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 443 3466678999999764221 11235778899999963 36789999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 567 LDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 567 LDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
|||||++||+.++..+.+.|.+. +.|||+||||++++..+||+|++|++|++.. .|+.++..+
T Consensus 159 lDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~~ 225 (242)
T cd03295 159 MDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQ-VGTPDEILR 225 (242)
T ss_pred ecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-ecCHHHHHc
Confidence 99999999999999999998864 4699999999999999999999999999974 577666543
No 261
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.1e-40 Score=336.64 Aligned_cols=192 Identities=21% Similarity=0.339 Sum_probs=162.9
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEEE
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~~ 165 (652)
++|+++|+++.|+++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.. ..++|
T Consensus 6 ~~i~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 85 (225)
T PRK10247 6 PLLQLQNVGYLAGDAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVSY 85 (225)
T ss_pred ceEEEeccEEeeCCceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccEE
Confidence 46999999999988889999999999999999999999999999999999999999999998742 35999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh
Q 006275 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (652)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (652)
++|++.++. .|++||+..... +. .......++.++++.
T Consensus 86 ~~q~~~l~~-~tv~enl~~~~~---------------~~--------------------------~~~~~~~~~~~~l~~ 123 (225)
T PRK10247 86 CAQTPTLFG-DTVYDNLIFPWQ---------------IR--------------------------NQQPDPAIFLDDLER 123 (225)
T ss_pred Eeccccccc-ccHHHHHHhHHh---------------hc--------------------------CCChHHHHHHHHHHH
Confidence 999988754 599999752100 00 000012344567888
Q ss_pred cCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHh
Q 006275 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQ 321 (652)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~ 321 (652)
+|+.....++++.+|||||+|||+|||||+.+|++|||||||+|||+.+++.+.++|++ .|.|||++||+++++.
T Consensus 124 ~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~- 202 (225)
T PRK10247 124 FALPDTILTKNIAELSGGEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEIN- 202 (225)
T ss_pred cCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHH-
Confidence 88864467889999999999999999999999999999999999999999999887753 4889999999999995
Q ss_pred hcCeEEEEc
Q 006275 322 LCTKIVETE 330 (652)
Q Consensus 322 ~~d~ii~l~ 330 (652)
.||++++|+
T Consensus 203 ~~d~i~~l~ 211 (225)
T PRK10247 203 HADKVITLQ 211 (225)
T ss_pred hCCEEEEEe
Confidence 699999996
No 262
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-40 Score=351.69 Aligned_cols=216 Identities=21% Similarity=0.297 Sum_probs=174.3
Q ss_pred CceEEEeEEEEeC----CeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC----CCCcEEEECCCC-------
Q 006275 96 SGVKLENISKSYK----GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE----PDSGNVIKAKSN------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~----~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~----p~~G~i~~~~~~------- 160 (652)
++|+++|++++|+ ...+|+||||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 2 ~~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~ 81 (330)
T PRK15093 2 PLLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPR 81 (330)
T ss_pred CeEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHH
Confidence 3689999999993 3579999999999999999999999999999999999997 589999998742
Q ss_pred -------ceEEEEeccCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCC
Q 006275 161 -------MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVN 231 (652)
Q Consensus 161 -------~~i~~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (652)
..|+|++|++. +.+..||.+++...+... . .. . . + ...
T Consensus 82 ~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~-~-----------~~--~-------~---------~---~~~ 128 (330)
T PRK15093 82 ERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGW-T-----------YK--G-------R---------W---WQR 128 (330)
T ss_pred HHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhh-h-----------cc--c-------c---------c---ccc
Confidence 25999999985 446678998875211000 0 00 0 0 0 000
Q ss_pred hhcHHHHHHHHhhhcCCCc--ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----C
Q 006275 232 LDTLDAKVSKLMPELGFTA--DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----Q 305 (652)
Q Consensus 232 ~~~~~~~i~~ll~~lgl~~--~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~ 305 (652)
.....+++.++++.+|+.. ...++++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|++ .
T Consensus 129 ~~~~~~~~~~~L~~~gL~~~~~~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~ 208 (330)
T PRK15093 129 FGWRKRRAIELLHRVGIKDHKDAMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNN 208 (330)
T ss_pred HHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc
Confidence 0122356678899999963 246788999999999999999999999999999999999999999999888753 5
Q ss_pred CCeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 306 DVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 306 g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
|.|||+||||++++.++||+|++|.+|++ +..|+..++.
T Consensus 209 g~tii~itHdl~~v~~~~dri~vm~~G~i-ve~g~~~~i~ 247 (330)
T PRK15093 209 NTTILLISHDLQMLSQWADKINVLYCGQT-VETAPSKELV 247 (330)
T ss_pred CCEEEEEECCHHHHHHhCCEEEEEECCEE-EEECCHHHHH
Confidence 89999999999999999999999999998 4677765543
No 263
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-40 Score=335.45 Aligned_cols=206 Identities=27% Similarity=0.429 Sum_probs=174.6
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------ceEEEEecc
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------~~i~~v~Q~ 169 (652)
|+++|++++|+++++++++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|++|+
T Consensus 1 l~~~~l~~~~~~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~ 80 (232)
T cd03300 1 IELENVSKFYGGFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPHKRPVNTVFQN 80 (232)
T ss_pred CEEEeEEEEeCCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcceEEEecc
Confidence 478999999998889999999999999999999999999999999999999999999998742 369999999
Q ss_pred CccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCC
Q 006275 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (652)
Q Consensus 170 ~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (652)
+.++...|+.+|+...+... ..........+..+++.+|+.
T Consensus 81 ~~~~~~~t~~~nl~~~~~~~---------------------------------------~~~~~~~~~~~~~~l~~~~l~ 121 (232)
T cd03300 81 YALFPHLTVFENIAFGLRLK---------------------------------------KLPKAEIKERVAEALDLVQLE 121 (232)
T ss_pred cccCCCCcHHHHHHHHHHhc---------------------------------------CCCHHHHHHHHHHHHHHcCCc
Confidence 98777789999975321100 000111234556778888986
Q ss_pred cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCe
Q 006275 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTK 325 (652)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~ 325 (652)
+..++.+.+|||||+||++|||||+.+|++|||||||+|||+.+++++.++|++ .|+|||++||+++++.++||+
T Consensus 122 -~~~~~~~~~lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~ 200 (232)
T cd03300 122 -GYANRKPSQLSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDR 200 (232)
T ss_pred -hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCE
Confidence 677888999999999999999999999999999999999999999999988743 389999999999999999999
Q ss_pred EEEEcCCeEEEecCChHHH
Q 006275 326 IVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 326 ii~l~~G~~~~~~g~~~~~ 344 (652)
++++++|++. +.|+..++
T Consensus 201 i~~l~~G~~~-~~~~~~~~ 218 (232)
T cd03300 201 IAVMNKGKIQ-QIGTPEEI 218 (232)
T ss_pred EEEEECCEEE-ecCCHHHH
Confidence 9999999984 55665444
No 264
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2.8e-40 Score=336.10 Aligned_cols=203 Identities=27% Similarity=0.394 Sum_probs=173.7
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------cceec
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYFE 494 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~~~~ 494 (652)
+|+++|++++|+++.+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~~~ 80 (236)
T TIGR03864 1 ALEVAGLSFAYGARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGVVF 80 (236)
T ss_pred CEEEEeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEEeC
Confidence 478999999999889999999999999999999999999999999999999999999999997652 23444
Q ss_pred ccccccCCCCCCHHHHHHHhhhh--c----cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEe
Q 006275 495 QNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLD 568 (652)
Q Consensus 495 ~~~~~~~~~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLD 568 (652)
|+ ..+++..|+.+|+...... . ....+.++++.+|+. ...++++.+||||||||++|||||+.+|++||||
T Consensus 81 q~--~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrl~laral~~~p~llllD 157 (236)
T TIGR03864 81 QQ--PTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLA-ERADDKVRELNGGHRRRVEIARALLHRPALLLLD 157 (236)
T ss_pred CC--CCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 43 3455678999998764321 1 123567889999995 5678999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 569 EPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 569 EPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
|||++||+.+++.+.+.|.++ +.|||+||||++++.. ||++++|++|++.. .|++++....
T Consensus 158 EP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~-~d~i~~l~~G~i~~-~~~~~~~~~~ 222 (236)
T TIGR03864 158 EPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEA-DDRLVVLHRGRVLA-DGAAAELRGA 222 (236)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhh-CCEEEEEeCCeEEE-eCCHHHHHHH
Confidence 999999999999999998764 4699999999999975 99999999999974 5777665543
No 265
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.4e-40 Score=339.35 Aligned_cols=203 Identities=27% Similarity=0.426 Sum_probs=174.2
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------------
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------------- 489 (652)
+|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK11264 3 AIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIRQ 82 (250)
T ss_pred cEEEeceEEEECCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHHH
Confidence 689999999999888999999999999999999999999999999999999999999999987652
Q ss_pred ----cceecccccccCCCCCCHHHHHHHhhh---hc----cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHH
Q 006275 490 ----PNYFEQNQAEALDLDKTVLETVAEAAE---DW----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (652)
Q Consensus 490 ----~~~~~~~~~~~~~~~~tv~e~~~~~~~---~~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral 558 (652)
.+|++|+ ..+++..|+.+|+..... .. ....+.++++.+|+. ...++++.+|||||||||+|||||
T Consensus 83 ~~~~i~~v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~Gq~qrv~la~al 159 (250)
T PRK11264 83 LRQHVGFVFQN--FNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLA-GKETSYPRRLSGGQQQRVAIARAL 159 (250)
T ss_pred hhhhEEEEecC--cccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCc-chhhCChhhCChHHHHHHHHHHHH
Confidence 1233333 345667899999975321 11 123467889999995 567899999999999999999999
Q ss_pred ccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+||++++|++|++. ..|+.+++.+
T Consensus 160 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 233 (250)
T PRK11264 160 AMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIV-EQGPAKALFA 233 (250)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHHhc
Confidence 9999999999999999999999999998764 469999999999999999999999999997 4577776643
No 266
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.8e-40 Score=332.33 Aligned_cols=191 Identities=29% Similarity=0.388 Sum_probs=165.4
Q ss_pred EEEEeeeeEeCC-eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-------------c
Q 006275 425 VTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------------P 490 (652)
Q Consensus 425 i~~~~v~~~y~~-~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------------~ 490 (652)
++++|+++.|++ +.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 1 l~~~~l~~~~~~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i 80 (214)
T cd03292 1 IEFINVTKTYPNGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRKI 80 (214)
T ss_pred CEEEEEEEEeCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHhe
Confidence 478999999964 68999999999999999999999999999999999999999999999997652 1
Q ss_pred ceecccccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCe
Q 006275 491 NYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (652)
Q Consensus 491 ~~~~~~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~l 564 (652)
.|++|+ ..+++..|+.+|+...... ...+.+.++++.+++. ...++++.+||||||||++|||||+.+|++
T Consensus 81 ~~v~q~--~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~l 157 (214)
T cd03292 81 GVVFQD--FRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLS-HKHRALPAELSGGEQQRVAIARAIVNSPTI 157 (214)
T ss_pred EEEecC--chhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-HHhhCChhhcCHHHHHHHHHHHHHHcCCCE
Confidence 234443 3466678999999865321 1123567889999994 567899999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEE
Q 006275 565 LVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (652)
Q Consensus 565 LlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i 618 (652)
|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|++
T Consensus 158 lllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 158 LIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999865 46999999999999999999999999874
No 267
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.6e-40 Score=335.83 Aligned_cols=197 Identities=30% Similarity=0.461 Sum_probs=167.9
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCC-----CCCeeEEEECceecc----------
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLE-----KPRGGEVLLGEHNVL---------- 489 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~-----~p~~G~i~~~g~~~~---------- 489 (652)
|+++||+++|+++++|+++||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|.++.
T Consensus 1 i~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (227)
T cd03260 1 IELRDLNVYYGDKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLELR 80 (227)
T ss_pred CEEEEEEEEcCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHHHH
Confidence 47899999999889999999999999999999999999999999999999 999999999998652
Q ss_pred --cceecccccccCCCCCCHHHHHHHhhhh---c----cHHHHHHHHhhCCCChhhhccC--cCCCCHHHHHHHHHHHHH
Q 006275 490 --PNYFEQNQAEALDLDKTVLETVAEAAED---W----RIDDIKGLLGRCNFKADMLDRK--VSLLSGGEKARLAFCKFM 558 (652)
Q Consensus 490 --~~~~~~~~~~~~~~~~tv~e~~~~~~~~---~----~~~~~~~~L~~~~l~~~~~~~~--~~~LSgGqrqrv~LAral 558 (652)
.+|++|+ ..++ ..|+.+|+...... . ....+.++++.+|+. +..++. +.+||||||||++|||||
T Consensus 81 ~~i~~~~q~--~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~LSgG~~qrv~la~al 156 (227)
T cd03260 81 RRVGMVFQK--PNPF-PGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALW-DEVKDRLHALGLSGGQQQRLCLARAL 156 (227)
T ss_pred hhEEEEecC--chhc-cccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCC-hHHhccCCcccCCHHHHHHHHHHHHH
Confidence 1244443 2344 78999999764321 1 124577889999995 445555 599999999999999999
Q ss_pred ccCCCeEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChh
Q 006275 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYN 626 (652)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~ 626 (652)
+.+|++|||||||++||+.++..+.+.|+++. .|||++|||++++..+||++++|++|++.. .|+++
T Consensus 157 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~ 225 (227)
T cd03260 157 ANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVE-FGPTE 225 (227)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEE-ecCcc
Confidence 99999999999999999999999999998763 599999999999999999999999999974 35543
No 268
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-40 Score=336.77 Aligned_cols=203 Identities=27% Similarity=0.376 Sum_probs=173.9
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------ccee
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~~ 493 (652)
.|+++|++++|+++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~~ 82 (241)
T PRK14250 3 EIEFKEVSYSSFGKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIGMV 82 (241)
T ss_pred eEEEEeEEEEeCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEEEE
Confidence 489999999998888999999999999999999999999999999999999999999999997652 1344
Q ss_pred cccccccCCCCCCHHHHHHHhhh--hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCC
Q 006275 494 EQNQAEALDLDKTVLETVAEAAE--DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPT 571 (652)
Q Consensus 494 ~~~~~~~~~~~~tv~e~~~~~~~--~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt 571 (652)
+|+ ..++ ..|+.+|+..... .....++.++++.+++..+..++++.+||||||||++|||||+.+|++|||||||
T Consensus 83 ~q~--~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt 159 (241)
T PRK14250 83 FQQ--PHLF-EGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVLLLDEPT 159 (241)
T ss_pred ecC--chhc-hhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 444 2333 3699999875422 1223457788999999645678999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 572 NHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 572 ~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
++||+.+++.+.+.|++. +.|||+||||++++..+||+|++|++|++.. .|+.++...
T Consensus 160 ~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~~ 221 (241)
T PRK14250 160 SALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVE-YAKTYDFFT 221 (241)
T ss_pred ccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEE-eCCHHHHhc
Confidence 999999999999998764 5699999999999999999999999999974 466666543
No 269
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-40 Score=354.63 Aligned_cols=199 Identities=26% Similarity=0.410 Sum_probs=170.3
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------------ce
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------MK 162 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------------~~ 162 (652)
+|++ |++++|+++. + |+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..
T Consensus 1 ~l~~-~l~k~~~~~~-~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~~ 77 (352)
T PRK11144 1 MLEL-NFKQQLGDLC-L-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKRR 77 (352)
T ss_pred CeEE-EEEEEeCCEE-E-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhCC
Confidence 3777 9999998754 3 8999999999999999999999999999999999999999987632 25
Q ss_pred EEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHH
Q 006275 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (652)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (652)
++|++|++.+++.+||+||+...+.. ...+++.++
T Consensus 78 i~~v~q~~~l~~~~tv~enl~~~~~~---------------------------------------------~~~~~~~~~ 112 (352)
T PRK11144 78 IGYVFQDARLFPHYKVRGNLRYGMAK---------------------------------------------SMVAQFDKI 112 (352)
T ss_pred EEEEcCCcccCCCCcHHHHHHhhhhh---------------------------------------------hhHHHHHHH
Confidence 99999999988889999998532110 012345577
Q ss_pred hhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHH
Q 006275 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAF 318 (652)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~ 318 (652)
++.+|+. +..++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|++ .|+|||+||||+++
T Consensus 113 l~~~gl~-~~~~~~~~~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~ 191 (352)
T PRK11144 113 VALLGIE-PLLDRYPGSLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDE 191 (352)
T ss_pred HHHcCCc-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHH
Confidence 8888986 578899999999999999999999999999999999999999999999887743 48899999999999
Q ss_pred HHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 319 LDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 319 l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
+..+||+|++|++|++. ..|+..++.
T Consensus 192 ~~~~~d~i~~l~~G~i~-~~g~~~~i~ 217 (352)
T PRK11144 192 ILRLADRVVVLEQGKVK-AFGPLEEVW 217 (352)
T ss_pred HHHhCCEEEEEeCCEEE-EecCHHHHH
Confidence 99999999999999984 557655543
No 270
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-40 Score=335.38 Aligned_cols=206 Identities=30% Similarity=0.425 Sum_probs=174.2
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------ceEEEEecc
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------~~i~~v~Q~ 169 (652)
|+++|+++.|++. +|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|++|+
T Consensus 1 l~~~~l~~~~~~~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~~~~~i~~~~q~ 79 (235)
T cd03299 1 LKVENLSKDWKEF-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPPEKRDISYVPQN 79 (235)
T ss_pred CeeEeEEEEeCCc-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCChhHcCEEEEeec
Confidence 4789999999864 8999999999999999999999999999999999999999999998742 269999999
Q ss_pred CccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCC
Q 006275 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (652)
Q Consensus 170 ~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (652)
+.+++..|+.||+...+... ........+.+.++++.+|+.
T Consensus 80 ~~~~~~~t~~e~l~~~~~~~---------------------------------------~~~~~~~~~~~~~~l~~~~l~ 120 (235)
T cd03299 80 YALFPHMTVYKNIAYGLKKR---------------------------------------KVDKKEIERKVLEIAEMLGID 120 (235)
T ss_pred CccCCCccHHHHHHHHHHHc---------------------------------------CCCHHHHHHHHHHHHHHcCCh
Confidence 88877889999985321100 001112234556778888986
Q ss_pred cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCe
Q 006275 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTK 325 (652)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~ 325 (652)
+..++.+.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|++ .++|||++||+++++..+||+
T Consensus 121 -~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~ 199 (235)
T cd03299 121 -HLLNRKPETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADK 199 (235)
T ss_pred -hHHhcCcccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCE
Confidence 677888999999999999999999999999999999999999999999988753 389999999999999999999
Q ss_pred EEEEcCCeEEEecCChHHHH
Q 006275 326 IVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 326 ii~l~~G~~~~~~g~~~~~~ 345 (652)
|+++++|++. ..|+++++.
T Consensus 200 i~~l~~G~i~-~~~~~~~~~ 218 (235)
T cd03299 200 VAIMLNGKLI-QVGKPEEVF 218 (235)
T ss_pred EEEEECCEEE-EecCHHHHH
Confidence 9999999884 567765543
No 271
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-40 Score=330.88 Aligned_cols=192 Identities=27% Similarity=0.387 Sum_probs=167.4
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------cceecc
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYFEQ 495 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~~~~~ 495 (652)
|+++|+++.|+++++++|+||+|++| +++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|
T Consensus 1 i~~~~~~~~~~~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 79 (211)
T cd03264 1 LQLENLTKRYGKKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGYLPQ 79 (211)
T ss_pred CEEEEEEEEECCEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEEecC
Confidence 47899999998889999999999999 99999999999999999999999999999999997652 134444
Q ss_pred cccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeC
Q 006275 496 NQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (652)
Q Consensus 496 ~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDE 569 (652)
+ ..+++..|+.+|+...... .....+.++++.+++. +..++++.+||||||||++|||||+.+|++|||||
T Consensus 80 ~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDE 156 (211)
T cd03264 80 E--FGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLG-DRAKKKIGSLSGGMRRRVGIAQALVGDPSILIVDE 156 (211)
T ss_pred C--CcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCH-HHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3 3456678999998764221 1124577889999995 56789999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEe
Q 006275 570 PTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (652)
Q Consensus 570 Pt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~ 620 (652)
||++||+.+++.+.+.|+++ +.|||+||||++++.++|||+++|++|++..
T Consensus 157 Pt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~ 209 (211)
T cd03264 157 PTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVF 209 (211)
T ss_pred CcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999999999999999876 4699999999999999999999999999863
No 272
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-40 Score=338.02 Aligned_cols=210 Identities=21% Similarity=0.277 Sum_probs=169.8
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCC--CC---CCcEEEECCCC----------
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQE--EP---DSGNVIKAKSN---------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~--~p---~~G~i~~~~~~---------- 160 (652)
++|+++|++++|+++++|+++||+|++||+++|+||||||||||+++|+|+. +| ++|+|.++|.+
T Consensus 4 ~~l~~~~l~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 83 (252)
T PRK14239 4 PILQVSDLSVYYNKKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVD 83 (252)
T ss_pred ceEEEEeeEEEECCeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHh
Confidence 3699999999999888999999999999999999999999999999999985 36 59999998742
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
..++|++|++.++. .|++||+...... ... .........
T Consensus 84 ~~~~i~~v~q~~~~~~-~tv~enl~~~~~~---------------~~~-----------------------~~~~~~~~~ 124 (252)
T PRK14239 84 LRKEIGMVFQQPNPFP-MSIYENVVYGLRL---------------KGI-----------------------KDKQVLDEA 124 (252)
T ss_pred hhhcEEEEecCCccCc-CcHHHHHHHHHHH---------------cCC-----------------------CcHHHHHHH
Confidence 25999999988755 8999998532100 000 000012233
Q ss_pred HHHHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006275 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (652)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (652)
+.++++.+|+.. ...++.+.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .++|||++|
T Consensus 125 ~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~s 204 (252)
T PRK14239 125 VEKSLKGASIWDEVKDRLHDSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVT 204 (252)
T ss_pred HHHHHHHcCCchhHHHHHhcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEE
Confidence 445566666531 345778899999999999999999999999999999999999999999988753 368999999
Q ss_pred cCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
|+++++..+||+|+++++|++. +.|+..++.
T Consensus 205 H~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 235 (252)
T PRK14239 205 RSMQQASRISDRTGFFLDGDLI-EYNDTKQMF 235 (252)
T ss_pred CCHHHHHHhCCEEEEEECCEEE-EeCCHHHHH
Confidence 9999999999999999999984 667765543
No 273
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-40 Score=337.22 Aligned_cols=202 Identities=26% Similarity=0.350 Sum_probs=174.0
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------------
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------------- 489 (652)
+|+++|+++.|+++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 2 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 81 (242)
T PRK11124 2 SIQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRELR 81 (242)
T ss_pred EEEEEeeEEEECCeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHHH
Confidence 589999999999889999999999999999999999999999999999999999999999998641
Q ss_pred --cceecccccccCCCCCCHHHHHHHhh-h---h---ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHcc
Q 006275 490 --PNYFEQNQAEALDLDKTVLETVAEAA-E---D---WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (652)
Q Consensus 490 --~~~~~~~~~~~~~~~~tv~e~~~~~~-~---~---~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~ 560 (652)
.+|++|. ..+++..|+.+|+.... . . .....+.++++.+|+. ...++++.+||||||||++|||||+.
T Consensus 82 ~~i~~~~q~--~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~laral~~ 158 (242)
T PRK11124 82 RNVGMVFQQ--YNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLK-PYADRFPLHLSGGQQQRVAIARALMM 158 (242)
T ss_pred hheEEEecC--ccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 1244443 34666789999986421 1 1 1123577889999995 57799999999999999999999999
Q ss_pred CCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 561 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
+|++|||||||++||+.++..+.+.|++. +.|||+||||.+++..+||++++|++|++. +.|+++++.
T Consensus 159 ~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~-~~~~~~~~~ 229 (242)
T PRK11124 159 EPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIV-EQGDASCFT 229 (242)
T ss_pred CCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHhc
Confidence 99999999999999999999999999864 469999999999999999999999999997 457777653
No 274
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-40 Score=339.59 Aligned_cols=211 Identities=20% Similarity=0.278 Sum_probs=171.2
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC--C---CCcEEEECCCC---------
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE--P---DSGNVIKAKSN--------- 160 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~--p---~~G~i~~~~~~--------- 160 (652)
.++|+++|+++.|+++++|+++||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.+
T Consensus 10 ~~~l~i~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 10 QEVYQINGMNLWYGQHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred CceEEEeeEEEEECCeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 346999999999998889999999999999999999999999999999999987 3 58999988742
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHH
Q 006275 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (652)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (652)
..++|++|++.+++ .|++||+...... .. .....+...
T Consensus 90 ~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~---------------~~-----------------------~~~~~~~~~ 130 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFP-QSIFDNVAYGPRI---------------HG-----------------------TKNKKKLQE 130 (259)
T ss_pred HHhhceEEEecCCcccc-cCHHHHHHhHHHh---------------cC-----------------------CCCHHHHHH
Confidence 24999999988765 4999998521100 00 000011223
Q ss_pred HHHHHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 006275 238 KVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (652)
Q Consensus 238 ~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIiv 312 (652)
++.++++.+|+.. +..++++.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|++ .++|||+|
T Consensus 131 ~~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiv 210 (259)
T PRK14274 131 IVEKSLKDVALWDEVKDRLHTQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIV 210 (259)
T ss_pred HHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 4455666667642 245778899999999999999999999999999999999999999999888753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 313 sHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
||+++++.++||||++|++|++. ..|+.+++.
T Consensus 211 tH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 242 (259)
T PRK14274 211 THNMQQAARVSDQTAFFYMGELV-ECNDTNKMF 242 (259)
T ss_pred EcCHHHHHHhCCEEEEEECCEEE-EECCHHHHh
Confidence 99999999999999999999984 667766553
No 275
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.9e-40 Score=332.41 Aligned_cols=193 Identities=23% Similarity=0.316 Sum_probs=165.9
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCc-------eEEEEec
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM-------KIAFLSQ 168 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~-------~i~~v~Q 168 (652)
++|+++|++++|+++++++++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|... .++|++|
T Consensus 10 ~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~~~~~~i~~~~q 89 (214)
T PRK13543 10 PLLAAHALAFSRNEEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRGDRSRFMAYLGH 89 (214)
T ss_pred ceEEEeeEEEecCCceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccchhhhhceEEeec
Confidence 469999999999888899999999999999999999999999999999999999999999987532 4999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCC
Q 006275 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (652)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (652)
++.+++..|++||+..... +. ....++.+.++++.+|+
T Consensus 90 ~~~~~~~~t~~e~l~~~~~---------------~~---------------------------~~~~~~~~~~~l~~~~l 127 (214)
T PRK13543 90 LPGLKADLSTLENLHFLCG---------------LH---------------------------GRRAKQMPGSALAIVGL 127 (214)
T ss_pred CcccccCCcHHHHHHHHHH---------------hc---------------------------CCcHHHHHHHHHHHcCC
Confidence 9887777899999752110 00 00112334567788888
Q ss_pred CcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCe
Q 006275 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTK 325 (652)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~d~ 325 (652)
. +..++++.+|||||||||+||||++.+|++|||||||++||+.+++++.++|+ +.++|||++|||++++.++||+
T Consensus 128 ~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~ 206 (214)
T PRK13543 128 A-GYEDTLVRQLSAGQKKRLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTR 206 (214)
T ss_pred h-hhccCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcce
Confidence 6 56788899999999999999999999999999999999999999999988874 3589999999999999999999
Q ss_pred EEEEcC
Q 006275 326 IVETEM 331 (652)
Q Consensus 326 ii~l~~ 331 (652)
+++++.
T Consensus 207 i~~l~~ 212 (214)
T PRK13543 207 MLTLEA 212 (214)
T ss_pred EEEEee
Confidence 998863
No 276
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-40 Score=338.25 Aligned_cols=208 Identities=20% Similarity=0.296 Sum_probs=169.3
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC-----CCCcEEEECCCC-----------
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN----------- 160 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~i~~~~~~----------- 160 (652)
+|+++|++++|+++++|+++||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 4 ~l~~~~l~~~~~~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~ 83 (251)
T PRK14251 4 IISAKDVHLSYGNYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVEL 83 (251)
T ss_pred eEEEEeeEEEECCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHh
Confidence 5899999999998889999999999999999999999999999999999997 479999998742
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHH
Q 006275 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (652)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (652)
..++|++|++.++ ..|++||+...+... .. .........+
T Consensus 84 ~~~i~~~~q~~~~~-~~tv~enl~~~~~~~---------------~~-----------------------~~~~~~~~~~ 124 (251)
T PRK14251 84 RKEVGMVFQQPTPF-PFSVYDNVAYGLKIA---------------GV-----------------------KDKELIDQRV 124 (251)
T ss_pred hccEEEEecCCccC-CCcHHHHHHHHHHHc---------------CC-----------------------CCHHHHHHHH
Confidence 2499999998775 479999985321100 00 0000112334
Q ss_pred HHHhhhcCCC---cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 006275 240 SKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (652)
Q Consensus 240 ~~ll~~lgl~---~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsH 314 (652)
.++++.+|+. ....++.+.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|||+|||
T Consensus 125 ~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH 204 (251)
T PRK14251 125 EESLKQAAIWKETKDNLDRNAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTH 204 (251)
T ss_pred HHHHHHcCCCcchHHHhccChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEEC
Confidence 4556666663 1345778899999999999999999999999999999999999999999888754 3689999999
Q ss_pred CHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 315 d~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
+++++..+||+|++|++|++. ..|+.+++
T Consensus 205 ~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 233 (251)
T PRK14251 205 NLQQAGRISDQTAFLMNGDLI-EAGPTEEM 233 (251)
T ss_pred CHHHHHhhcCEEEEEECCEEE-EeCCHHHH
Confidence 999999999999999999985 45665544
No 277
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-40 Score=337.40 Aligned_cols=208 Identities=20% Similarity=0.302 Sum_probs=168.0
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCC-----CCcEEEECCCC-----------
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN----------- 160 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~i~~~~~~----------- 160 (652)
.|+++|+++.|+++++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 82 (250)
T PRK14240 3 KISVKDLDLFYGDFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQL 82 (250)
T ss_pred eEEEEEEEEEECCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHH
Confidence 58999999999888899999999999999999999999999999999999763 69999998742
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHH
Q 006275 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (652)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (652)
..++|++|++.++. .|+++|+...... ... .......+.+
T Consensus 83 ~~~i~~~~q~~~~~~-~t~~~ni~~~~~~---------------~~~-----------------------~~~~~~~~~~ 123 (250)
T PRK14240 83 RKRVGMVFQQPNPFP-MSIYDNVAYGPRT---------------HGI-----------------------KDKKKLDEIV 123 (250)
T ss_pred hccEEEEecCCccCc-ccHHHHHHHHHHh---------------cCC-----------------------CCHHHHHHHH
Confidence 25999999987765 8999998532100 000 0000122334
Q ss_pred HHHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 006275 240 SKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (652)
Q Consensus 240 ~~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsH 314 (652)
.++++.+++.. ...++++.+||||||||++|||||+.+|++|||||||+|||+.++.++.++|++ .+.|||+|||
T Consensus 124 ~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH 203 (250)
T PRK14240 124 EKSLKGAALWDEVKDRLKKSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTH 203 (250)
T ss_pred HHHHHHcCCchhhHHHHhcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEe
Confidence 45555555531 345778999999999999999999999999999999999999999999888753 3789999999
Q ss_pred CHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 315 d~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
+++.+..+||+|+++++|++. ..|+.+++
T Consensus 204 ~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~ 232 (250)
T PRK14240 204 NMQQASRISDKTAFFLNGEIV-EFGDTVDL 232 (250)
T ss_pred CHHHHHhhCCEEEEEECCEEE-EeCCHHHH
Confidence 999999999999999999985 55665554
No 278
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=5.5e-41 Score=372.30 Aligned_cols=211 Identities=39% Similarity=0.650 Sum_probs=185.7
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecccceecccccccCC
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALD 502 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 502 (652)
.+|+++|++++|+++++|+++||+|.+|+++||||+||||||||||+|+|...|++|+|...+. +..+|+.|.. ...
T Consensus 2 ~~i~~~~ls~~~g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~-~~v~~l~Q~~--~~~ 78 (530)
T COG0488 2 SMITLENLSLAYGDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKG-LRVGYLSQEP--PLD 78 (530)
T ss_pred ceEEEeeeEEeeCCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCC-ceEEEeCCCC--CcC
Confidence 4699999999999999999999999999999999999999999999999999999999998753 4567887764 455
Q ss_pred CCCCHHHHHHHhhhh-----------------------------------cc-HHHHHHHHhhCCCChhhhccCcCCCCH
Q 006275 503 LDKTVLETVAEAAED-----------------------------------WR-IDDIKGLLGRCNFKADMLDRKVSLLSG 546 (652)
Q Consensus 503 ~~~tv~e~~~~~~~~-----------------------------------~~-~~~~~~~L~~~~l~~~~~~~~~~~LSg 546 (652)
...||.+.+..+... |. ..++..+|..+|+... ++++.+|||
T Consensus 79 ~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~--~~~~~~LSG 156 (530)
T COG0488 79 PEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE--DRPVSSLSG 156 (530)
T ss_pred CCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc--cCchhhcCH
Confidence 667888877654210 11 1356778888999643 899999999
Q ss_pred HHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChh
Q 006275 547 GEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYN 626 (652)
Q Consensus 547 Gqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~ 626 (652)
|||.||+||+||+.+|++|||||||||||.++..+|.+.|.++.+|||+||||++|+..+|++|+.++.|++..|.|+|+
T Consensus 157 G~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~gtviiVSHDR~FLd~V~t~I~~ld~g~l~~y~Gny~ 236 (530)
T COG0488 157 GWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYPGTVIVVSHDRYFLDNVATHILELDRGKLTPYKGNYS 236 (530)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHhhheEEecCCceeEecCCHH
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred hHhhhcCCcccc
Q 006275 627 VCFTSFSPFLLV 638 (652)
Q Consensus 627 ~~~~~~~~~~~~ 638 (652)
.|.+..+....-
T Consensus 237 ~~~~~r~~~~~~ 248 (530)
T COG0488 237 SYLEQKAERLRQ 248 (530)
T ss_pred HHHHHHHHHHHH
Confidence 998877665533
No 279
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.1e-40 Score=331.09 Aligned_cols=190 Identities=35% Similarity=0.509 Sum_probs=163.1
Q ss_pred EEEeeeeEeCC--eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------ccee
Q 006275 426 TIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (652)
Q Consensus 426 ~~~~v~~~y~~--~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~~ 493 (652)
+++|++++|++ +.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 46899999987 78999999999999999999999999999999999999999999999997652 1344
Q ss_pred cccccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEE
Q 006275 494 EQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (652)
Q Consensus 494 ~~~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlL 567 (652)
+|... ...+..|+.+|+...... .....+.++++.+++. +..++++.+|||||||||+|||||+.+|++|||
T Consensus 81 ~q~~~-~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~laral~~~p~llll 158 (211)
T cd03225 81 FQNPD-DQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLE-GLRDRSPFTLSGGQKQRVAIAGVLAMDPDILLL 158 (211)
T ss_pred ecChh-hhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcH-hhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 44321 124568999998764321 1123567889999995 667899999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCE
Q 006275 568 DEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSN 617 (652)
Q Consensus 568 DEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~ 617 (652)
||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+
T Consensus 159 DEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 159 DEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 9999999999999999999865 3599999999999999999999999874
No 280
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.5e-40 Score=330.88 Aligned_cols=189 Identities=28% Similarity=0.441 Sum_probs=160.6
Q ss_pred EEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------------ceEEE
Q 006275 100 LENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------MKIAF 165 (652)
Q Consensus 100 v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------------~~i~~ 165 (652)
++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|
T Consensus 1 i~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~ 80 (206)
T TIGR03608 1 LKNISKKFGDKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKLGY 80 (206)
T ss_pred CcceEEEECCEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCeeE
Confidence 4789999998889999999999999999999999999999999999999999999998753 25999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh
Q 006275 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (652)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (652)
++|++.+++..|++||+...... . ........+++.++++.
T Consensus 81 ~~q~~~~~~~~t~~e~~~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~ 121 (206)
T TIGR03608 81 LFQNFALIENETVEENLDLGLKY---------------K------------------------KLSKKEKREKKKEALEK 121 (206)
T ss_pred EecchhhccCCcHHHHHHHHHHh---------------c------------------------CCCHHHHHHHHHHHHHH
Confidence 99999887788999998532100 0 00011223456678888
Q ss_pred cCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhh
Q 006275 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQL 322 (652)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~ 322 (652)
+|+. +..++++.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|++ .+.|||++||+++++ .+
T Consensus 122 ~~l~-~~~~~~~~~lS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~-~~ 199 (206)
T TIGR03608 122 VGLN-LKLKQKIYELSGGEQQRVALARAILKDPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVA-KQ 199 (206)
T ss_pred cCch-hhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH-hh
Confidence 8985 567888999999999999999999999999999999999999999999988753 488999999999977 58
Q ss_pred cCeEEEE
Q 006275 323 CTKIVET 329 (652)
Q Consensus 323 ~d~ii~l 329 (652)
||+|++|
T Consensus 200 ~d~i~~l 206 (206)
T TIGR03608 200 ADRVIEL 206 (206)
T ss_pred cCEEEeC
Confidence 9999875
No 281
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-40 Score=343.81 Aligned_cols=204 Identities=25% Similarity=0.345 Sum_probs=171.7
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc------------cc
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------PN 491 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------~~ 491 (652)
||+++||+++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 1 ml~~~~l~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i~ 80 (271)
T PRK13638 1 MLATSDLWFRYQDEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQVA 80 (271)
T ss_pred CeEEEEEEEEcCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhheE
Confidence 489999999998888999999999999999999999999999999999999999999999998752 12
Q ss_pred eecccccccCCCCCCHHHHHHHhhhh--c----cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeE
Q 006275 492 YFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (652)
Q Consensus 492 ~~~~~~~~~~~~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lL 565 (652)
|++|+.. ...+..++.+|+...... . ....+.++++.+++. +..++++.+||||||||++|||||+.+|+||
T Consensus 81 ~v~q~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrl~laraL~~~p~ll 158 (271)
T PRK13638 81 TVFQDPE-QQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQ-HFRHQPIQCLSHGQKKRVAIAGALVLQARYL 158 (271)
T ss_pred EEeeChh-hccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-hHhcCCchhCCHHHHHHHHHHHHHHcCCCEE
Confidence 4444321 122345788888754211 1 123466789999984 6678999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 566 lLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||||||++||+.++..+.++|+++ +.|||+||||++++..+||++++|++|++.. .|++++...
T Consensus 159 lLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~ 225 (271)
T PRK13638 159 LLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILT-HGAPGEVFA 225 (271)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHhc
Confidence 999999999999999999999865 4599999999999999999999999999874 577766543
No 282
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=2.4e-40 Score=348.50 Aligned_cols=196 Identities=22% Similarity=0.328 Sum_probs=169.7
Q ss_pred eEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------cceecccccccCC
Q 006275 432 FGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYFEQNQAEALD 502 (652)
Q Consensus 432 ~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~~~~~~~~~~~~ 502 (652)
++|+++.+|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+|++|. ..++
T Consensus 1 k~y~~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~--~~~~ 78 (302)
T TIGR01188 1 KVYGDFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQY--ASVD 78 (302)
T ss_pred CeeCCeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCC--CCCC
Confidence 4688888999999999999999999999999999999999999999999999997752 2455554 3566
Q ss_pred CCCCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCH
Q 006275 503 LDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 576 (652)
Q Consensus 503 ~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~ 576 (652)
+.+|+.+|+.+..... ....+.++++.+++. +..++++.+|||||||||+|||||+.+|++|||||||+|||+
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~ 157 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAEERAEELLELFELG-EAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDP 157 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 7889999997643211 123577899999995 568999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 577 PSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 577 ~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
.+++.+.++|+++ +.|||++||+++++.++||+|++|++|++. +.|++++..+.
T Consensus 158 ~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~l~~~ 214 (302)
T TIGR01188 158 RTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRII-AEGTPEELKRR 214 (302)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EECCHHHHHHh
Confidence 9999999999865 469999999999999999999999999997 46887776543
No 283
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-40 Score=340.92 Aligned_cols=211 Identities=23% Similarity=0.331 Sum_probs=172.3
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCC-----CCcEEEECCCC---------
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN--------- 160 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~i~~~~~~--------- 160 (652)
.+.|+++|++++|+++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|..
T Consensus 19 ~~~l~i~nl~~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 19 APAMAAVNLTLGFAGKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred CcEEEEeeEEEEECCEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 4579999999999988999999999999999999999999999999999999985 79999998732
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
..++|++|++.+++ .|+++|+...+... . ..........
T Consensus 99 ~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~--------------~------------------------~~~~~~~~~~ 139 (276)
T PRK14271 99 FRRRVGMLFQRPNPFP-MSIMDNVLAGVRAH--------------K------------------------LVPRKEFRGV 139 (276)
T ss_pred HhhheEEeccCCccCC-ccHHHHHHHHHHhc--------------c------------------------CCCHHHHHHH
Confidence 25999999988765 89999985321100 0 0001112233
Q ss_pred HHHHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006275 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (652)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (652)
+.++++.+|+.. ...++.+.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .++|||+||
T Consensus 140 ~~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivs 219 (276)
T PRK14271 140 AQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVT 219 (276)
T ss_pred HHHHHHHcCCCchhhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 455667777742 235677899999999999999999999999999999999999999999888753 258999999
Q ss_pred cCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
|+++++.++|||+++|++|++. ..|+.+++.
T Consensus 220 H~~~~~~~~~dri~~l~~G~i~-~~g~~~~~~ 250 (276)
T PRK14271 220 HNLAQAARISDRAALFFDGRLV-EEGPTEQLF 250 (276)
T ss_pred CCHHHHHHhCCEEEEEECCEEE-EeCCHHHHH
Confidence 9999999999999999999974 557766553
No 284
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.7e-40 Score=332.72 Aligned_cols=192 Identities=31% Similarity=0.496 Sum_probs=164.8
Q ss_pred EEEEEeeeeEeCC----eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------
Q 006275 424 VVTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~----~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------- 489 (652)
+|+++||++.|++ +++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 ~l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (221)
T TIGR02211 1 LLKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKL 80 (221)
T ss_pred CEEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHH
Confidence 3789999999974 57999999999999999999999999999999999999999999999997652
Q ss_pred ----cceecccccccCCCCCCHHHHHHHhhh--h----ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHc
Q 006275 490 ----PNYFEQNQAEALDLDKTVLETVAEAAE--D----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV 559 (652)
Q Consensus 490 ----~~~~~~~~~~~~~~~~tv~e~~~~~~~--~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~ 559 (652)
.+|++|+ ..+++..|+.+|+..... . .....+.++++.+|+. +..++++.+|||||||||+|||||+
T Consensus 81 ~~~~i~~v~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~ 157 (221)
T TIGR02211 81 RNKKLGFIYQF--HHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLE-HRINHRPSELSGGERQRVAIARALV 157 (221)
T ss_pred HHhcEEEEecc--cccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHh
Confidence 1234443 345667899999976321 1 1123567899999995 5678999999999999999999999
Q ss_pred cCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEE
Q 006275 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQ 619 (652)
Q Consensus 560 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~ 619 (652)
.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.. ||++++|++|+++
T Consensus 158 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~-~d~v~~l~~G~i~ 220 (221)
T TIGR02211 158 NQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKK-LDRVLEMKDGQLF 220 (221)
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhh-cCEEEEEeCCEec
Confidence 999999999999999999999999999754 4699999999999965 7999999999874
No 285
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-40 Score=336.23 Aligned_cols=209 Identities=23% Similarity=0.319 Sum_probs=171.6
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC---CCCcEEEECCCC----------ceE
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE---PDSGNVIKAKSN----------MKI 163 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~---p~~G~i~~~~~~----------~~i 163 (652)
+++++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|.+ ..|
T Consensus 2 ~~~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i 81 (246)
T PRK14269 2 IAKTTNLNLFYGKKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNV 81 (246)
T ss_pred ceeeeeeEEEECCEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhE
Confidence 4889999999998889999999999999999999999999999999999974 699999998743 259
Q ss_pred EEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHh
Q 006275 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (652)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (652)
+|++|++.++. .|++||+...... ..... +......++.+++
T Consensus 82 ~~~~q~~~l~~-~tv~eni~~~~~~-----------~~~~~--------------------------~~~~~~~~~~~~l 123 (246)
T PRK14269 82 GMVFQQPNVFV-KSIYENISYAPKL-----------HGMIK--------------------------NKDEEEALVVDCL 123 (246)
T ss_pred EEEecCCcccc-ccHHHHhhhHHhh-----------cCccc--------------------------ChHHHHHHHHHHH
Confidence 99999988764 6999998532100 00000 0011233455677
Q ss_pred hhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHH
Q 006275 244 PELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAF 318 (652)
Q Consensus 244 ~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~ 318 (652)
+.+|+.+ ...++.+.+|||||||||+|||||+.+|++|||||||+|||+.++.++.+.|++ .++|||+|||++++
T Consensus 124 ~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~ 203 (246)
T PRK14269 124 QKVGLFEEVKDKLKQNALALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQ 203 (246)
T ss_pred HHcCCChhhhHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHH
Confidence 7888742 235778899999999999999999999999999999999999999999888753 48899999999999
Q ss_pred HHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 319 LDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 319 l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
+..+||+|+++++|++. ..|+..++
T Consensus 204 ~~~~~d~i~~l~~G~i~-~~g~~~~~ 228 (246)
T PRK14269 204 GKRVADYTAFFHLGELI-EFGESKEF 228 (246)
T ss_pred HHhhCcEEEEEECCEEE-EECCHHHH
Confidence 99999999999999984 55665554
No 286
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-40 Score=350.17 Aligned_cols=206 Identities=21% Similarity=0.340 Sum_probs=175.0
Q ss_pred EEEEEeeeeEeC----CeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC----CCeeEEEECceecc------
Q 006275 424 VVTIKNLEFGYE----DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK----PRGGEVLLGEHNVL------ 489 (652)
Q Consensus 424 ~i~~~~v~~~y~----~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~----p~~G~i~~~g~~~~------ 489 (652)
+|+++|+++.|+ ...+++|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 689999999993 4579999999999999999999999999999999999996 58999999998752
Q ss_pred --------cceecccccccCCCCCCHHHHHHHhhh------------hccHHHHHHHHhhCCCCh--hhhccCcCCCCHH
Q 006275 490 --------PNYFEQNQAEALDLDKTVLETVAEAAE------------DWRIDDIKGLLGRCNFKA--DMLDRKVSLLSGG 547 (652)
Q Consensus 490 --------~~~~~~~~~~~~~~~~tv~e~~~~~~~------------~~~~~~~~~~L~~~~l~~--~~~~~~~~~LSgG 547 (652)
.++++|+....+++.+|+.+++..... ......+.++|+.+|+.. +..++++.+||||
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~p~~LSgG 162 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTEG 162 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHH
Confidence 235666654446778899998865211 011245788999999963 3468999999999
Q ss_pred HHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecC
Q 006275 548 EKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAG 623 (652)
Q Consensus 548 qrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g 623 (652)
|||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++.++||||++|++|+|++ .|
T Consensus 163 ~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G~ive-~g 241 (330)
T PRK15093 163 ECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCGQTVE-TA 241 (330)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEE-EC
Confidence 999999999999999999999999999999999999998763 5699999999999999999999999999985 57
Q ss_pred ChhhHhh
Q 006275 624 DYNVCFT 630 (652)
Q Consensus 624 ~~~~~~~ 630 (652)
+.+++++
T Consensus 242 ~~~~i~~ 248 (330)
T PRK15093 242 PSKELVT 248 (330)
T ss_pred CHHHHHh
Confidence 7766543
No 287
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-40 Score=335.80 Aligned_cols=203 Identities=22% Similarity=0.364 Sum_probs=174.4
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-----------cce
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PNY 492 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~~ 492 (652)
+++++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 3 ~l~~~~l~~~~~~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 82 (241)
T PRK10895 3 TLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIGY 82 (241)
T ss_pred eEEEeCcEEEeCCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCeEE
Confidence 689999999999889999999999999999999999999999999999999999999999997652 123
Q ss_pred ecccccccCCCCCCHHHHHHHhhhh-------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeE
Q 006275 493 FEQNQAEALDLDKTVLETVAEAAED-------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (652)
Q Consensus 493 ~~~~~~~~~~~~~tv~e~~~~~~~~-------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lL 565 (652)
++|+ ..+++..|+.+|+...... .....+.++++.+++. +..++++.+|||||||||+|||||+.+|++|
T Consensus 83 ~~q~--~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~ll 159 (241)
T PRK10895 83 LPQE--ASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIE-HLRDSMGQSLSGGERRRVEIARALAANPKFI 159 (241)
T ss_pred eccC--CcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCH-HHhhcchhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 4443 3456678999998764211 1123577889999984 5678999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 566 lLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||||||++||+.++..+.+.+.++ +.|||++|||++++..+||++++|++|++.. .|+++++..
T Consensus 160 llDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~~~ 226 (241)
T PRK10895 160 LLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIA-HGTPTEILQ 226 (241)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEe-eCCHHHHhc
Confidence 999999999999999999888754 5699999999999999999999999999974 688777653
No 288
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=4.3e-40 Score=334.91 Aligned_cols=206 Identities=32% Similarity=0.479 Sum_probs=173.9
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------ceEEEEecc
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------~~i~~v~Q~ 169 (652)
|+++|++++|+++++|+|+||+|.+|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|++|+
T Consensus 1 i~i~~l~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~~~~~i~~~~q~ 80 (237)
T TIGR00968 1 IEIANISKRFGSFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHARDRKIGFVFQH 80 (237)
T ss_pred CEEEEEEEEECCeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcCEEEEecC
Confidence 478999999998889999999999999999999999999999999999999999999998643 359999999
Q ss_pred CccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCC
Q 006275 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (652)
Q Consensus 170 ~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (652)
+.+++..|+.||+...... . ........+.+.++++.+++.
T Consensus 81 ~~~~~~~t~~enl~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~~l~ 121 (237)
T TIGR00968 81 YALFKHLTVRDNIAFGLEI---------------R------------------------KHPKAKIKARVEELLELVQLE 121 (237)
T ss_pred hhhccCCcHHHHHHhHHHh---------------c------------------------CCCHHHHHHHHHHHHHHcCCH
Confidence 9877778999998532100 0 000011223456778888885
Q ss_pred cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCe
Q 006275 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTK 325 (652)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~ 325 (652)
+..++.+.+|||||+||++|||||+.+|+++||||||+|||+.+++++.++|++ .++|||++||+++++.++||+
T Consensus 122 -~~~~~~~~~lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~ 200 (237)
T TIGR00968 122 -GLGDRYPNQLSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADR 200 (237)
T ss_pred -hHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCE
Confidence 567888999999999999999999999999999999999999999999988753 378999999999999999999
Q ss_pred EEEEcCCeEEEecCChHHH
Q 006275 326 IVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 326 ii~l~~G~~~~~~g~~~~~ 344 (652)
++++++|++. ..|+.+++
T Consensus 201 i~~l~~g~i~-~~~~~~~~ 218 (237)
T TIGR00968 201 IVVMSNGKIE-QIGSPDEV 218 (237)
T ss_pred EEEEECCEEE-EecCHHHH
Confidence 9999999984 55665554
No 289
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-40 Score=342.67 Aligned_cols=207 Identities=25% Similarity=0.390 Sum_probs=172.3
Q ss_pred CceEEEeEEEEeC--CeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceE
Q 006275 96 SGVKLENISKSYK--GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKI 163 (652)
Q Consensus 96 ~~i~v~~ls~~y~--~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i 163 (652)
.+|+++|+++.|+ ++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..+
T Consensus 6 ~~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 6 VMIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred eEEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 4699999999995 4579999999999999999999999999999999999999999999998743 259
Q ss_pred EEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHH
Q 006275 164 AFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (652)
Q Consensus 164 ~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (652)
+|++|++. .++..|++||+....... ..........+.++
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~---------------------------------------~~~~~~~~~~~~~~ 126 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENK---------------------------------------KVPPKKMKDIIDDL 126 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHc---------------------------------------CCCHHHHHHHHHHH
Confidence 99999974 456789999985321000 00111223456678
Q ss_pred hhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---C-CCeEEEEecCHHH
Q 006275 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---Q-DVPMVIISHDRAF 318 (652)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~-g~tvIivsHd~~~ 318 (652)
++.+|+. +..++.+.+||||||||++|||||+.+|++|||||||+|||+.+++.+.++|++ . +.|||++||++++
T Consensus 127 l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~ 205 (271)
T PRK13632 127 AKKVGME-DYLDKEPQNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE 205 (271)
T ss_pred HHHcCCH-HHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH
Confidence 8888986 567889999999999999999999999999999999999999999999988753 3 5899999999999
Q ss_pred HHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 319 LDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 319 l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
+. .||++++|++|++. ..|+.+++
T Consensus 206 ~~-~~d~v~~l~~G~i~-~~g~~~~~ 229 (271)
T PRK13632 206 AI-LADKVIVFSEGKLI-AQGKPKEI 229 (271)
T ss_pred Hh-hCCEEEEEECCEEE-EecCHHHH
Confidence 95 79999999999984 55665544
No 290
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-40 Score=337.01 Aligned_cols=210 Identities=20% Similarity=0.314 Sum_probs=168.2
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCC-----CcEEEECCCC-----------
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD-----SGNVIKAKSN----------- 160 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~-----~G~i~~~~~~----------- 160 (652)
+|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|+ +|+|.++|.+
T Consensus 4 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 83 (252)
T PRK14272 4 LLSAQDVNIYYGDKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAM 83 (252)
T ss_pred EEEEeeeEEEECCEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHh
Confidence 589999999999888999999999999999999999999999999999999874 8999998732
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHH
Q 006275 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (652)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (652)
..++|++|++.+++..|+.||+...+... .. . ......+.+
T Consensus 84 ~~~i~~~~q~~~~~~~~t~~enl~~~~~~~-~~---------------~----------------------~~~~~~~~~ 125 (252)
T PRK14272 84 RRRVGMVFQKPNPFPTMSVFDNVVAGLKLA-GI---------------R----------------------DRDHLMEVA 125 (252)
T ss_pred hceeEEEeccCccCcCCCHHHHHHHHHHhc-CC---------------C----------------------CHHHHHHHH
Confidence 25999999998877789999985322100 00 0 000011122
Q ss_pred HHHhhhcCCC---cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 006275 240 SKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (652)
Q Consensus 240 ~~ll~~lgl~---~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsH 314 (652)
.+++..+++. ....++++.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|++ .++|||++||
T Consensus 126 ~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH 205 (252)
T PRK14272 126 ERSLRGAALWDEVKDRLKTPATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTH 205 (252)
T ss_pred HHHHHHcCcchhhhhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 2333333321 1345778899999999999999999999999999999999999999999988753 3689999999
Q ss_pred CHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 315 d~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
+++++..+||+|++|++|++. ..|+.+++.
T Consensus 206 ~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 235 (252)
T PRK14272 206 NMHQAARVSDTTSFFLVGDLV-EHGPTDQLF 235 (252)
T ss_pred CHHHHHHhCCEEEEEECCEEE-EeCCHHHHH
Confidence 999999999999999999984 667765543
No 291
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=6.3e-40 Score=335.77 Aligned_cols=203 Identities=28% Similarity=0.388 Sum_probs=174.0
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCC-----eeEEEECceecc---------
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR-----GGEVLLGEHNVL--------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~-----~G~i~~~g~~~~--------- 489 (652)
+|+++||+++|+++.+++|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~ 80 (247)
T TIGR00972 1 AIEIENLNLFYGEKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVEL 80 (247)
T ss_pred CEEEEEEEEEECCeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHH
Confidence 478999999999888999999999999999999999999999999999999998 999999998753
Q ss_pred ---cceecccccccCCCCCCHHHHHHHhhhhc-------cHHHHHHHHhhCCCCh---hhhccCcCCCCHHHHHHHHHHH
Q 006275 490 ---PNYFEQNQAEALDLDKTVLETVAEAAEDW-------RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCK 556 (652)
Q Consensus 490 ---~~~~~~~~~~~~~~~~tv~e~~~~~~~~~-------~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqrqrv~LAr 556 (652)
.+|++|+ ..+++ .|+.+|+....... ....+.++++.+|+.. +..++++.+||||||||++|||
T Consensus 81 ~~~i~~v~q~--~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~lar 157 (247)
T TIGR00972 81 RRRVGMVFQK--PNPFP-MSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKDRLHDSALGLSGGQQQRLCIAR 157 (247)
T ss_pred HhheEEEecC--cccCC-CCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCCcccCCHHHHHHHHHHH
Confidence 1244443 34555 89999998643211 1235678899999852 4578899999999999999999
Q ss_pred HHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||+.+|++|||||||++||+.++..+.++|+++. .|||+||||++++..+||++++|++|++. ..|+.+++.+
T Consensus 158 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 232 (247)
T TIGR00972 158 ALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELV-EYGPTEQIFT 232 (247)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHh
Confidence 9999999999999999999999999999998753 59999999999999999999999999997 4577777654
No 292
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-40 Score=333.07 Aligned_cols=194 Identities=28% Similarity=0.435 Sum_probs=166.9
Q ss_pred cEEEEEeeeeEeCC----eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------
Q 006275 423 SVVTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (652)
Q Consensus 423 ~~i~~~~v~~~y~~----~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------- 489 (652)
++|+++||++.|++ +++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 4 ~~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~ 83 (233)
T PRK11629 4 ILLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAE 83 (233)
T ss_pred ceEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHH
Confidence 47999999999974 57999999999999999999999999999999999999999999999997652
Q ss_pred -----cceecccccccCCCCCCHHHHHHHhhh------hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHH
Q 006275 490 -----PNYFEQNQAEALDLDKTVLETVAEAAE------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (652)
Q Consensus 490 -----~~~~~~~~~~~~~~~~tv~e~~~~~~~------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral 558 (652)
.+|++|+ ..+++..|+.+|+..... ....+++.++++.+|+. +..++++.+||||||||++||||+
T Consensus 84 ~~~~~i~~v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qrl~la~al 160 (233)
T PRK11629 84 LRNQKLGFIYQF--HHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLE-HRANHRPSELSGGERQRVAIARAL 160 (233)
T ss_pred HHhccEEEEecC--cccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHH
Confidence 1234443 345667899999976421 11124577899999995 567899999999999999999999
Q ss_pred ccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEe
Q 006275 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (652)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~ 620 (652)
+.+|+||||||||++||+.++..+.+.|+++ +.|||+||||++++..+ |++++|++|+++.
T Consensus 161 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~-~~~~~l~~G~i~~ 225 (233)
T PRK11629 161 VNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRM-SRQLEMRDGRLTA 225 (233)
T ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhh-CEEEEEECCEEEE
Confidence 9999999999999999999999999999864 45999999999999874 7999999999864
No 293
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.1e-40 Score=356.13 Aligned_cols=204 Identities=24% Similarity=0.331 Sum_probs=174.5
Q ss_pred EeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCC----C--------------ce
Q 006275 101 ENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKS----N--------------MK 162 (652)
Q Consensus 101 ~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~----~--------------~~ 162 (652)
.++.+.|+...+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. + .+
T Consensus 28 ~~~~~~~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~ 107 (382)
T TIGR03415 28 EEILDETGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHR 107 (382)
T ss_pred HHHHHhhCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCC
Confidence 45677888888999999999999999999999999999999999999999999999873 1 25
Q ss_pred EEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHH
Q 006275 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (652)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (652)
|+|++|++.+++..||+||+...+.. . .+...+...++.++
T Consensus 108 i~~vfQ~~~l~p~~Tv~eNi~~~~~~---------------~------------------------g~~~~~~~~~a~e~ 148 (382)
T TIGR03415 108 VSMVFQKFALMPWLTVEENVAFGLEM---------------Q------------------------GMPEAERRKRVDEQ 148 (382)
T ss_pred EEEEECCCcCCCCCcHHHHHHHHHHh---------------c------------------------CCCHHHHHHHHHHH
Confidence 99999999998889999998632110 0 01111234466788
Q ss_pred hhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHH
Q 006275 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAF 318 (652)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~ 318 (652)
++.+|+. +..++++.+|||||||||+|||||+.+|+||||||||++||+.++..+.+.|. +.++|||+||||+++
T Consensus 149 le~vgL~-~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e 227 (382)
T TIGR03415 149 LELVGLA-QWADKKPGELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDE 227 (382)
T ss_pred HHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH
Confidence 8999996 67899999999999999999999999999999999999999999999988764 248999999999999
Q ss_pred HHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 319 LDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 319 l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
+.++||||++|++|++. ..|+.+++.
T Consensus 228 ~~~l~DrI~vl~~G~iv-~~g~~~ei~ 253 (382)
T TIGR03415 228 ALKIGNRIAIMEGGRII-QHGTPEEIV 253 (382)
T ss_pred HHHhCCEEEEEECCEEE-EecCHHHHh
Confidence 99999999999999984 667766654
No 294
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=4.9e-40 Score=337.55 Aligned_cols=203 Identities=26% Similarity=0.358 Sum_probs=174.1
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------------
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------------- 489 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------------- 489 (652)
|+++||++.|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~~ 80 (252)
T TIGR03005 1 VRFSDVTKRFGILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPADEK 80 (252)
T ss_pred CEEEEEEEEeCCeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccchh
Confidence 47899999999889999999999999999999999999999999999999999999999997652
Q ss_pred --------cceecccccccCCCCCCHHHHHHHhhh-------hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHH
Q 006275 490 --------PNYFEQNQAEALDLDKTVLETVAEAAE-------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAF 554 (652)
Q Consensus 490 --------~~~~~~~~~~~~~~~~tv~e~~~~~~~-------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~L 554 (652)
.++++| ...+++..|+.+|+..... ......+.++++.+|+. +..++.+.+||||||||++|
T Consensus 81 ~~~~~~~~i~~v~q--~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~l 157 (252)
T TIGR03005 81 HLRQMRNKIGMVFQ--SFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLA-DKADHMPAQLSGGQQQRVAI 157 (252)
T ss_pred HHHHHhhCeEEEec--CcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-hHhhcChhhcCHHHHHHHHH
Confidence 123333 3346667899999976421 11123577889999995 67789999999999999999
Q ss_pred HHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||||+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+|||+++|++|++. ..|+++++..
T Consensus 158 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 236 (252)
T TIGR03005 158 ARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIV-EQGKPDEIFR 236 (252)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHHhc
Confidence 99999999999999999999999999999998764 469999999999999999999999999997 4577777654
Q ss_pred h
Q 006275 631 S 631 (652)
Q Consensus 631 ~ 631 (652)
.
T Consensus 237 ~ 237 (252)
T TIGR03005 237 Q 237 (252)
T ss_pred C
Confidence 3
No 295
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-40 Score=342.54 Aligned_cols=205 Identities=27% Similarity=0.397 Sum_probs=175.1
Q ss_pred cEEEEEeeeeEeC-CeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc------------
Q 006275 423 SVVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------ 489 (652)
Q Consensus 423 ~~i~~~~v~~~y~-~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------ 489 (652)
++|+++|++++|+ ++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 4 ~~l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 4 YILKVEELNYNYSDGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred ceEEEEeEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 3799999999996 578999999999999999999999999999999999999999999999998752
Q ss_pred cceecccccccCCCCCCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCC
Q 006275 490 PNYFEQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (652)
Q Consensus 490 ~~~~~~~~~~~~~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~ 563 (652)
.+|++|+... ..+..|+.+|+....... ....+..+++.+|+. ...++++.+||||||||++|||||+.+|+
T Consensus 84 ig~v~q~~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LS~G~~qrl~laraL~~~p~ 161 (283)
T PRK13636 84 VGMVFQDPDN-QLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIE-HLKDKPTHCLSFGQKKRVAIAGVLVMEPK 161 (283)
T ss_pred EEEEecCcch-hhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCCh-hhhhCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 1355554321 234579999997643211 123577889999995 67899999999999999999999999999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 564 LLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 564 lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||||||||++||+.++..+.++|+++ +.|||++|||++++..+|||+++|++|++. +.|++++...
T Consensus 162 lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~-~~g~~~~~~~ 231 (283)
T PRK13636 162 VLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVI-LQGNPKEVFA 231 (283)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EeCCHHHHhc
Confidence 99999999999999999999988754 469999999999999999999999999997 4687776544
No 296
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=340.80 Aligned_cols=210 Identities=19% Similarity=0.302 Sum_probs=171.0
Q ss_pred CCCCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC-----CCCcEEEECCCC-------
Q 006275 93 SISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN------- 160 (652)
Q Consensus 93 ~~~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~i~~~~~~------- 160 (652)
...++|+++|++++|+++++|+++||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|..
T Consensus 35 ~~~~~l~i~~l~~~~~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 35 SGETVIEARDLNVFYGDEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred CCCceEEEEEEEEEECCEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 34567999999999988889999999999999999999999999999999999987 689999997642
Q ss_pred -----ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcH
Q 006275 161 -----MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTL 235 (652)
Q Consensus 161 -----~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (652)
..++|++|++.+++ .|+.||+...... .. .. ...
T Consensus 115 ~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~---------------~~------------------------~~-~~~ 153 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFP-KSIYDNVAYGLKI---------------QG------------------------YD-GDI 153 (285)
T ss_pred hHhhhccEEEEecCCccCc-CCHHHHHHHHHHH---------------cC------------------------Cc-HHH
Confidence 25999999987765 4999998532100 00 00 011
Q ss_pred HHHHHHHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEE
Q 006275 236 DAKVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMV 310 (652)
Q Consensus 236 ~~~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvI 310 (652)
..++.++++.+|+.. ...++++.+|||||||||+|||||+.+|+||||||||+|||+.+++++.++|++ .+.|||
T Consensus 154 ~~~~~~~l~~~~l~~~i~~~~~~~~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tii 233 (285)
T PRK14254 154 DERVEESLRRAALWDEVKDQLDSSGLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVV 233 (285)
T ss_pred HHHHHHHHHHcCCCchhHHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEE
Confidence 234556677777642 346788999999999999999999999999999999999999999999988754 257999
Q ss_pred EEecCHHHHHhhcCeEE-EEcCCeEEEecCChHHH
Q 006275 311 IISHDRAFLDQLCTKIV-ETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 311 ivsHd~~~l~~~~d~ii-~l~~G~~~~~~g~~~~~ 344 (652)
++||+++++..+|||++ ++++|++. ..|+..++
T Consensus 234 i~tH~~~~i~~~~dri~v~l~~G~i~-~~g~~~~~ 267 (285)
T PRK14254 234 IVTHNMQQAARISDKTAVFLTGGELV-EFDDTDKI 267 (285)
T ss_pred EEeCCHHHHHhhcCEEEEEeeCCEEE-EeCCHHHH
Confidence 99999999999999975 56999884 55765554
No 297
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=5.7e-40 Score=337.24 Aligned_cols=207 Identities=21% Similarity=0.305 Sum_probs=173.0
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECcee-----cc--------
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHN-----VL-------- 489 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~-----~~-------- 489 (652)
++|+++||++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ +.
T Consensus 2 ~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (253)
T TIGR02323 2 PLLQVSGLSKSYGGGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAERR 81 (253)
T ss_pred ceEEEeeeEEEeCCceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHHH
Confidence 46999999999988889999999999999999999999999999999999999999999999865 31
Q ss_pred ------cceecccccccCCCCCCHHHHHHHhhh-----h--ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHH
Q 006275 490 ------PNYFEQNQAEALDLDKTVLETVAEAAE-----D--WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCK 556 (652)
Q Consensus 490 ------~~~~~~~~~~~~~~~~tv~e~~~~~~~-----~--~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAr 556 (652)
.+++.|.....+.+..++.+|+..... . .....+.++++.+++.....++.+.+|||||||||+|||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~qrv~lar 161 (253)
T TIGR02323 82 RLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQRLQIAR 161 (253)
T ss_pred HhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCChhhhhcCchhcCHHHHHHHHHHH
Confidence 133444322223455688888754211 0 113457788999999545678999999999999999999
Q ss_pred HHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||+.+|++|||||||++||+.+++.+.++|.+. +.|||+|||+++++..+||++++|++|++.. .|+.+++..
T Consensus 162 al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~-~~~~~~~~~ 238 (253)
T TIGR02323 162 NLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVE-SGLTDQVLD 238 (253)
T ss_pred HHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEE-ECCHHHHhc
Confidence 999999999999999999999999999988753 5699999999999999999999999999974 577776654
No 298
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-40 Score=338.26 Aligned_cols=203 Identities=30% Similarity=0.431 Sum_probs=174.4
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------ccee
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~~ 493 (652)
+|+++|+++.|+++.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 2 ~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~~ 81 (258)
T PRK13548 2 MLEARNLSVRLGGRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAVL 81 (258)
T ss_pred eEEEEeEEEEeCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEEE
Confidence 589999999999889999999999999999999999999999999999999999999999997642 1344
Q ss_pred cccccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHc------cC
Q 006275 494 EQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV------KP 561 (652)
Q Consensus 494 ~~~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~------~~ 561 (652)
+|+ ..+.+..|+.+|+...... .....+.++++.+++. ...++.+.+|||||||||+|||||+ .+
T Consensus 82 ~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGe~qrv~la~al~~~~~~~~~ 158 (258)
T PRK13548 82 PQH--SSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLA-HLAGRDYPQLSGGEQQRVQLARVLAQLWEPDGP 158 (258)
T ss_pred ccC--CcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCH-hHhcCCcccCCHHHHHHHHHHHHHhcccccCCC
Confidence 443 3455678999999764321 1123567889999994 6679999999999999999999999 59
Q ss_pred CCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 562 STLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 562 p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+||+|++|++|++. ..|+++++.+
T Consensus 159 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 230 (258)
T PRK13548 159 PRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLV-ADGTPAEVLT 230 (258)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEE-eeCCHHHHhC
Confidence 9999999999999999999999998754 459999999999999999999999999987 4577766543
No 299
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-40 Score=339.10 Aligned_cols=210 Identities=19% Similarity=0.274 Sum_probs=172.0
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC-----CCCcEEEECCCC---------
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN--------- 160 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~i~~~~~~--------- 160 (652)
...|+++|++++|+++++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 18 ~~~l~~~nl~~~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 97 (267)
T PRK14237 18 EIALSTKDLHVYYGKKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVY 97 (267)
T ss_pred CeEEEEeeEEEEECCeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChH
Confidence 346999999999988889999999999999999999999999999999999986 589999988742
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHH
Q 006275 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (652)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (652)
..|+|++|++.+++ .|++||+...+... . .......+.
T Consensus 98 ~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~---------------~-----------------------~~~~~~~~~ 138 (267)
T PRK14237 98 EMRKHIGMVFQRPNPFA-KSIYENITFALERA---------------G-----------------------VKDKKVLDE 138 (267)
T ss_pred HHhcceEEEecCCcccc-ccHHHHHHhHHHhc---------------C-----------------------CCCHHHHHH
Confidence 25999999987755 69999985321100 0 000011233
Q ss_pred HHHHHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 006275 238 KVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (652)
Q Consensus 238 ~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIiv 312 (652)
++.++++.+++.. ...++++.+|||||+||++|||||+.+|++|||||||+|||+.++.++.++|++ .+.|||++
T Consensus 139 ~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~ 218 (267)
T PRK14237 139 IVETSLKQAALWDQVKDDLHKSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIV 218 (267)
T ss_pred HHHHHHHHcCCCchhhhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 4456666767631 346788999999999999999999999999999999999999999999887753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 313 sHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
||+++++..+||++++|++|++. ..|+..++
T Consensus 219 tH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 249 (267)
T PRK14237 219 THNMQQAARASDYTAFFYLGDLI-EYDKTRNI 249 (267)
T ss_pred ecCHHHHHHhcCEEEEEECCEEE-EeCCHHHH
Confidence 99999999999999999999984 66776654
No 300
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=3.4e-40 Score=330.23 Aligned_cols=196 Identities=26% Similarity=0.373 Sum_probs=166.1
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------ceEEEEecc
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------~~i~~v~Q~ 169 (652)
++++|+++.|+. .+.++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|+
T Consensus 1 ~~~~~l~~~~~~--~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q~ 78 (213)
T TIGR01277 1 LALDKVRYEYEH--LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLAPYQRPVSMLFQE 78 (213)
T ss_pred CeEEeeeEEeCC--cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCChhccceEEEecc
Confidence 478999999974 5789999999999999999999999999999999999999999998743 359999999
Q ss_pred CccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCC
Q 006275 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (652)
Q Consensus 170 ~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (652)
+.+++..|+.||+...+... . ......+.++.++++.+|+.
T Consensus 79 ~~~~~~~t~~en~~~~~~~~-------------~--------------------------~~~~~~~~~~~~~l~~~~l~ 119 (213)
T TIGR01277 79 NNLFAHLTVRQNIGLGLHPG-------------L--------------------------KLNAEQQEKVVDAAQQVGIA 119 (213)
T ss_pred CccCCCCcHHHHHHhHhhcc-------------C--------------------------CccHHHHHHHHHHHHHcCcH
Confidence 98877889999985321100 0 00001133456778888985
Q ss_pred cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCe
Q 006275 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTK 325 (652)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~ 325 (652)
+..++.+.+||||||||++|||||+.+|++|||||||++||+.++..+.++|++ .+.|||+|||+++++..+||+
T Consensus 120 -~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~ 198 (213)
T TIGR01277 120 -DYLDRLPEQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQ 198 (213)
T ss_pred -HHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCe
Confidence 567888999999999999999999999999999999999999999999887743 478999999999999999999
Q ss_pred EEEEcCCeEE
Q 006275 326 IVETEMGVSR 335 (652)
Q Consensus 326 ii~l~~G~~~ 335 (652)
+++|++|++.
T Consensus 199 v~~l~~g~i~ 208 (213)
T TIGR01277 199 IAVVSQGKIK 208 (213)
T ss_pred EEEEECCeEE
Confidence 9999999874
No 301
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-40 Score=336.22 Aligned_cols=209 Identities=19% Similarity=0.255 Sum_probs=170.4
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCC-----CCcEEEECCCC----------
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN---------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~i~~~~~~---------- 160 (652)
++|+++|++++|+++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 3 ~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 82 (251)
T PRK14270 3 IKMESKNLNLWYGEKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVE 82 (251)
T ss_pred cEEEEEEeEEEECCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHH
Confidence 469999999999888899999999999999999999999999999999999875 79999998743
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
..++|++|++.++. .|+++|+...... ... ........+
T Consensus 83 ~~~~i~~~~q~~~~~~-~tv~enl~~~~~~---------------~~~-----------------------~~~~~~~~~ 123 (251)
T PRK14270 83 LRKRVGMVFQKPNPFP-MSIYDNVAYGPRI---------------HGI-----------------------KDKKELDKI 123 (251)
T ss_pred HHhheEEEecCCCcCC-CcHHHHHHhHHHh---------------cCC-----------------------CcHHHHHHH
Confidence 24999999988765 8999998522100 000 000011233
Q ss_pred HHHHhhhcCCC---cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006275 239 VSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (652)
Q Consensus 239 i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (652)
+.++++.+|+. ....++++.+||||||||++|||||+.+|+||||||||+|||+.++.++.++|++ .+.|||+||
T Consensus 124 ~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivs 203 (251)
T PRK14270 124 VEWALKKAALWDEVKDDLKKSALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVT 203 (251)
T ss_pred HHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEE
Confidence 44566666663 1345778899999999999999999999999999999999999999999888753 268999999
Q ss_pred cCHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
|+++++..+|||++++++|++. ..|+.++.
T Consensus 204 H~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~ 233 (251)
T PRK14270 204 HNMQQASRVSDYTAFFLMGDLI-EFNKTEKI 233 (251)
T ss_pred cCHHHHHHhcCEEEEEECCeEE-EeCCHHHH
Confidence 9999999999999999999984 55665554
No 302
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=5e-40 Score=335.45 Aligned_cols=202 Identities=28% Similarity=0.392 Sum_probs=170.6
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCC--CCCeeEEEECceecc-----------cc
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLE--KPRGGEVLLGEHNVL-----------PN 491 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~--~p~~G~i~~~g~~~~-----------~~ 491 (652)
|+++|++++|+++.+|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|.++. .+
T Consensus 1 l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (243)
T TIGR01978 1 LKIKDLHVSVEDKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGLF 80 (243)
T ss_pred CeEeeEEEEECCEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccceE
Confidence 47899999999889999999999999999999999999999999999995 799999999997642 12
Q ss_pred eecccccccCCCCCCHHHHHHHhhhh---------cc----HHHHHHHHhhCCCChhhhccCcC-CCCHHHHHHHHHHHH
Q 006275 492 YFEQNQAEALDLDKTVLETVAEAAED---------WR----IDDIKGLLGRCNFKADMLDRKVS-LLSGGEKARLAFCKF 557 (652)
Q Consensus 492 ~~~~~~~~~~~~~~tv~e~~~~~~~~---------~~----~~~~~~~L~~~~l~~~~~~~~~~-~LSgGqrqrv~LAra 557 (652)
|++| ...+++..|+.+++...... .. ...+.++++.+++.....++++. +|||||||||+||||
T Consensus 81 ~v~q--~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrl~la~a 158 (243)
T TIGR01978 81 LAFQ--YPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVNEGFSGGEKKRNEILQM 158 (243)
T ss_pred eeec--cccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccccCcCHHHHHHHHHHHH
Confidence 3333 33456778999998653211 01 23467889999996456678887 599999999999999
Q ss_pred HccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhh-ccEEEEEeCCEEEeecCChhhHh
Q 006275 558 MVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQI-VNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 558 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~-~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
|+.+|++|||||||++||+.+++.+.++|+++ +.|||+||||++++..+ ||++++|++|++. ..|+++++.
T Consensus 159 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 233 (243)
T TIGR01978 159 ALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIV-KSGDVELAK 233 (243)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEE-EecCHHHhc
Confidence 99999999999999999999999999999876 46999999999999998 8999999999997 467777554
No 303
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=4.2e-40 Score=337.48 Aligned_cols=199 Identities=27% Similarity=0.383 Sum_probs=166.5
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccCccCCC
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMS 175 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~~~~~~ 175 (652)
++|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++|++.++..
T Consensus 3 ~~l~~~~l~~~~~~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~~-~~i~~v~q~~~~~~~ 81 (251)
T PRK09544 3 SLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNGK-LRIGYVPQKLYLDTT 81 (251)
T ss_pred cEEEEeceEEEECCceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCc-cCEEEeccccccccc
Confidence 3699999999999888999999999999999999999999999999999999999999999863 479999999866544
Q ss_pred --CCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccc
Q 006275 176 --RTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDG 253 (652)
Q Consensus 176 --~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~ 253 (652)
.|+.+++... . .....++.++++.+|+. +..
T Consensus 82 l~~~~~~~~~~~--~--------------------------------------------~~~~~~~~~~l~~~gl~-~~~ 114 (251)
T PRK09544 82 LPLTVNRFLRLR--P--------------------------------------------GTKKEDILPALKRVQAG-HLI 114 (251)
T ss_pred cChhHHHHHhcc--c--------------------------------------------cccHHHHHHHHHHcCCh-HHH
Confidence 3555553210 0 00012345667778885 567
Q ss_pred cCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCeEEEE
Q 006275 254 DRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTKIVET 329 (652)
Q Consensus 254 ~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~ii~l 329 (652)
++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .++|||+|||+++++..+||+|++|
T Consensus 115 ~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l 194 (251)
T PRK09544 115 DAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCL 194 (251)
T ss_pred hCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEE
Confidence 888999999999999999999999999999999999999999999888742 3899999999999999999999999
Q ss_pred cCCeEEEecCChHHH
Q 006275 330 EMGVSRTYEGNYSQY 344 (652)
Q Consensus 330 ~~G~~~~~~g~~~~~ 344 (652)
++ ++ ...|+.+++
T Consensus 195 ~~-~i-~~~g~~~~~ 207 (251)
T PRK09544 195 NH-HI-CCSGTPEVV 207 (251)
T ss_pred CC-ce-EeeCCHHHH
Confidence 75 54 466776554
No 304
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=6.7e-40 Score=331.45 Aligned_cols=194 Identities=28% Similarity=0.406 Sum_probs=166.7
Q ss_pred cEEEEEeeeeEeCC----eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------
Q 006275 423 SVVTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (652)
Q Consensus 423 ~~i~~~~v~~~y~~----~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------- 489 (652)
++|+++|++++|++ .++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 84 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAK 84 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHH
Confidence 47999999999975 36999999999999999999999999999999999999999999999997652
Q ss_pred -----cceecccccccCCCCCCHHHHHHHhhh------hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHH
Q 006275 490 -----PNYFEQNQAEALDLDKTVLETVAEAAE------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (652)
Q Consensus 490 -----~~~~~~~~~~~~~~~~tv~e~~~~~~~------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral 558 (652)
.+|++|+ ..+++..|+.+|+..... ....+++.++++.+++. +..++++.+||||||||++|||||
T Consensus 85 ~~~~~i~~~~q~--~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~Ge~qrl~la~al 161 (228)
T PRK10584 85 LRAKHVGFVFQS--FMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLG-KRLDHLPAQLSGGEQQRVALARAF 161 (228)
T ss_pred HHhheEEEEEcc--cccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCH-hHhhCChhhCCHHHHHHHHHHHHH
Confidence 1233433 346667899999875421 11234578899999995 667899999999999999999999
Q ss_pred ccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEe
Q 006275 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (652)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~ 620 (652)
+.+|++|||||||+|||+.+++.+.+.|+++ +.|||++|||++++.. ||++++|++|++.+
T Consensus 162 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~-~d~i~~l~~g~i~~ 226 (228)
T PRK10584 162 NGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAAR-CDRRLRLVNGQLQE 226 (228)
T ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHh-CCEEEEEECCEEEe
Confidence 9999999999999999999999999999754 4699999999999865 99999999999863
No 305
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-40 Score=338.05 Aligned_cols=202 Identities=29% Similarity=0.449 Sum_probs=173.9
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------ccee
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~~ 493 (652)
+|+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 2 ~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 81 (255)
T PRK11231 2 TLRTENLTVGYGTKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLALL 81 (255)
T ss_pred EEEEEeEEEEECCEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEEe
Confidence 589999999999889999999999999999999999999999999999999999999999997642 2344
Q ss_pred cccccccCCCCCCHHHHHHHhhh----------hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCC
Q 006275 494 EQNQAEALDLDKTVLETVAEAAE----------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (652)
Q Consensus 494 ~~~~~~~~~~~~tv~e~~~~~~~----------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~ 563 (652)
+|+ ..+.+..|+.+|+..... ......+.++++.+++. ...++++.+|||||||||+||||++.+|+
T Consensus 82 ~q~--~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~ 158 (255)
T PRK11231 82 PQH--HLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRIN-HLADRRLTDLSGGQRQRAFLAMVLAQDTP 158 (255)
T ss_pred ccc--CCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCH-HHHcCCcccCCHHHHHHHHHHHHHhcCCC
Confidence 444 235566799999876421 01123567889999994 56899999999999999999999999999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 564 LLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 564 lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
+|||||||+|||+.++..+.+.|+++ +.|||++|||++++.++||++++|++|++. ..|+++++.
T Consensus 159 llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 226 (255)
T PRK11231 159 VVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVM-AQGTPEEVM 226 (255)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEE-EEcCHHHhc
Confidence 99999999999999999999999764 469999999999999999999999999987 457766653
No 306
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-40 Score=335.90 Aligned_cols=208 Identities=22% Similarity=0.286 Sum_probs=169.7
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCC-----CCcEEEECCCC-----------
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN----------- 160 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~i~~~~~~----------- 160 (652)
+|+++|+++.|+++++|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~ 82 (250)
T PRK14262 3 IIEIENFSAYYGEKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEY 82 (250)
T ss_pred eEEEEeeEEEeCCceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHh
Confidence 68999999999888899999999999999999999999999999999999874 89999998732
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHH
Q 006275 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (652)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (652)
..++|++|++.++. .|+++|+....... .. ......+..+
T Consensus 83 ~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---------------~~-----------------------~~~~~~~~~~ 123 (250)
T PRK14262 83 RKKVGMVFQKPTPFP-MSIYDNVAFGPRIH---------------GV-----------------------KSKHKLDRIV 123 (250)
T ss_pred hhhEEEEecCCccCc-ccHHHHHHHHHHHc---------------CC-----------------------CcHHHHHHHH
Confidence 25999999987765 89999985321100 00 0000112234
Q ss_pred HHHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 006275 240 SKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (652)
Q Consensus 240 ~~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsH 314 (652)
.++++.+|+.. ...++.+.+||||||||++|||||+.+|++|||||||+|||+.++.++.++|++ .++|||++||
T Consensus 124 ~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH 203 (250)
T PRK14262 124 EESLKKAALWDEVKSELNKPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTH 203 (250)
T ss_pred HHHHHHcCCCchhHHHHhCChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeC
Confidence 45566666632 236788999999999999999999999999999999999999999999988753 3689999999
Q ss_pred CHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 315 d~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
+++++..+||+|+++++|++. ..|+.+++
T Consensus 204 ~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 232 (250)
T PRK14262 204 NIGQAIRIADYIAFMYRGELI-EYGPTREI 232 (250)
T ss_pred CHHHHHHhCCEEEEEECCEEE-EecCHHHH
Confidence 999999999999999999984 56765554
No 307
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=5.1e-40 Score=352.99 Aligned_cols=198 Identities=26% Similarity=0.392 Sum_probs=168.4
Q ss_pred eEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------------ceEEEEe
Q 006275 102 NISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------MKIAFLS 167 (652)
Q Consensus 102 ~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------------~~i~~v~ 167 (652)
|++++|++..+ ++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++
T Consensus 4 ~l~~~~~~~~~--~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~ 81 (354)
T TIGR02142 4 RFSKRLGDFSL--DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVF 81 (354)
T ss_pred EEEEEECCEEE--EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEEEe
Confidence 89999987664 8999999999999999999999999999999999999999987632 2499999
Q ss_pred ccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcC
Q 006275 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (652)
Q Consensus 168 Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (652)
|++.+++.+||+||+...+.. ........++.++++.+|
T Consensus 82 q~~~l~~~~tv~enl~~~~~~-----------------------------------------~~~~~~~~~~~~~l~~~g 120 (354)
T TIGR02142 82 QEARLFPHLSVRGNLRYGMKR-----------------------------------------ARPSERRISFERVIELLG 120 (354)
T ss_pred cCCccCCCCcHHHHHHHHhhc-----------------------------------------cChhHHHHHHHHHHHHcC
Confidence 999888889999998532110 000112345667888899
Q ss_pred CCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhc
Q 006275 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLC 323 (652)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~ 323 (652)
+. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++.+.++|++ .|+|||+||||++++..+|
T Consensus 121 L~-~~~~~~~~~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~ 199 (354)
T TIGR02142 121 IG-HLLGRLPGRLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLA 199 (354)
T ss_pred Ch-hHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhC
Confidence 96 578899999999999999999999999999999999999999999999887743 4899999999999999999
Q ss_pred CeEEEEcCCeEEEecCChHHH
Q 006275 324 TKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 324 d~ii~l~~G~~~~~~g~~~~~ 344 (652)
|+|++|++|++. ..|+.+++
T Consensus 200 d~i~~l~~G~i~-~~g~~~~~ 219 (354)
T TIGR02142 200 DRVVVLEDGRVA-AAGPIAEV 219 (354)
T ss_pred CEEEEEeCCEEE-EECCHHHH
Confidence 999999999984 56765543
No 308
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-40 Score=329.95 Aligned_cols=189 Identities=31% Similarity=0.458 Sum_probs=161.9
Q ss_pred eEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--------------ceEEEEe
Q 006275 102 NISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------MKIAFLS 167 (652)
Q Consensus 102 ~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------------~~i~~v~ 167 (652)
|++|+|+++.+ |+||+|++ ++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++
T Consensus 5 ~l~~~~~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~ 81 (214)
T cd03297 5 DIEKRLPDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVF 81 (214)
T ss_pred eeeEecCCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhcEEEEe
Confidence 99999998766 99999999 9999999999999999999999999999999998732 2599999
Q ss_pred ccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcC
Q 006275 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (652)
Q Consensus 168 Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (652)
|++.+++..|+.+|+...... ......+.++.++++.+|
T Consensus 82 q~~~~~~~~t~~~~l~~~~~~-----------------------------------------~~~~~~~~~~~~~l~~~~ 120 (214)
T cd03297 82 QQYALFPHLNVRENLAFGLKR-----------------------------------------KRNREDRISVDELLDLLG 120 (214)
T ss_pred cCCccCCCCCHHHHHHHHHhh-----------------------------------------CCHHHHHHHHHHHHHHcC
Confidence 999887788999998522100 000011234567788888
Q ss_pred CCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhc
Q 006275 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLC 323 (652)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~ 323 (652)
+. ...++++.+||||||||++|||||+.+|++|||||||+|||+.+++.+.++|++ .|+|||++||+++++..+|
T Consensus 121 l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~ 199 (214)
T cd03297 121 LD-HLLNRYPAQLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLA 199 (214)
T ss_pred CH-hHhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhc
Confidence 86 567888999999999999999999999999999999999999999999888743 3889999999999999999
Q ss_pred CeEEEEcCCeEE
Q 006275 324 TKIVETEMGVSR 335 (652)
Q Consensus 324 d~ii~l~~G~~~ 335 (652)
|+++++++|++.
T Consensus 200 d~i~~l~~G~i~ 211 (214)
T cd03297 200 DRIVVMEDGRLQ 211 (214)
T ss_pred CEEEEEECCEEE
Confidence 999999999874
No 309
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-40 Score=348.24 Aligned_cols=206 Identities=22% Similarity=0.323 Sum_probs=175.0
Q ss_pred EEEEEeeeeEeCC----eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC----CCeeEEEECceecc------
Q 006275 424 VVTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK----PRGGEVLLGEHNVL------ 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~----~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~----p~~G~i~~~g~~~~------ 489 (652)
+|+++|+++.|+. ..+|+||||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 5899999999975 469999999999999999999999999999999999997 48999999998752
Q ss_pred --------cceecccccccCCCCCCHHHHHHHhhh-------hccHHHHHHHHhhCCCCh--hhhccCcCCCCHHHHHHH
Q 006275 490 --------PNYFEQNQAEALDLDKTVLETVAEAAE-------DWRIDDIKGLLGRCNFKA--DMLDRKVSLLSGGEKARL 552 (652)
Q Consensus 490 --------~~~~~~~~~~~~~~~~tv~e~~~~~~~-------~~~~~~~~~~L~~~~l~~--~~~~~~~~~LSgGqrqrv 552 (652)
.++++|+....+++.+++.+++..... ....+.+.++|+.+|+.. ...++++.+|||||||||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~p~~LSgGq~QRv 162 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRV 162 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHHHH
Confidence 245566544456778888877654321 112345788999999953 456899999999999999
Q ss_pred HHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhH
Q 006275 553 AFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVC 628 (652)
Q Consensus 553 ~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~ 628 (652)
+|||||+.+|+||||||||++||+.++..+.++|+++ +.|+|+||||++.+.++||||++|++|+|++ .|+.++.
T Consensus 163 ~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive-~g~~~~~ 241 (326)
T PRK11022 163 MIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVE-TGKAHDI 241 (326)
T ss_pred HHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCHHHH
Confidence 9999999999999999999999999999999988764 4699999999999999999999999999985 4776665
Q ss_pred hh
Q 006275 629 FT 630 (652)
Q Consensus 629 ~~ 630 (652)
++
T Consensus 242 ~~ 243 (326)
T PRK11022 242 FR 243 (326)
T ss_pred hh
Confidence 43
No 310
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-40 Score=342.38 Aligned_cols=208 Identities=23% Similarity=0.360 Sum_probs=174.3
Q ss_pred CceEEEeEEEEeCC--eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCC---cEEEECCCC----------
Q 006275 96 SGVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDS---GNVIKAKSN---------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~---G~i~~~~~~---------- 160 (652)
.+|+++|+++.|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++ |+|.++|..
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 46999999999965 469999999999999999999999999999999999999987 899998743
Q ss_pred ceEEEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHH
Q 006275 161 MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (652)
Q Consensus 161 ~~i~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (652)
..|||++|++. .++..||+||+....... .....+..+++
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---------------------------------------~~~~~~~~~~~ 124 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENR---------------------------------------AVPRPEMIKIV 124 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhC---------------------------------------CCCHHHHHHHH
Confidence 25999999985 456789999985211000 01112234456
Q ss_pred HHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecC
Q 006275 240 SKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHD 315 (652)
Q Consensus 240 ~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd 315 (652)
.++++.+|+. +..++++.+|||||+|||+|||||+.+|++|||||||+|||+.++..+.++|++ .|+|||++||+
T Consensus 125 ~~~l~~~~L~-~~~~~~~~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~ 203 (282)
T PRK13640 125 RDVLADVGML-DYIDSEPANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHD 203 (282)
T ss_pred HHHHHHCCCh-hHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecC
Confidence 7788899996 578899999999999999999999999999999999999999999999888743 48999999999
Q ss_pred HHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 316 RAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 316 ~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
++++ ..||++++|++|++. ..|+.+++.
T Consensus 204 ~~~~-~~~d~i~~l~~G~i~-~~g~~~~~~ 231 (282)
T PRK13640 204 IDEA-NMADQVLVLDDGKLL-AQGSPVEIF 231 (282)
T ss_pred HHHH-HhCCEEEEEECCEEE-EeCCHHHHh
Confidence 9999 579999999999984 667766553
No 311
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=6.7e-40 Score=339.47 Aligned_cols=208 Identities=26% Similarity=0.395 Sum_probs=172.1
Q ss_pred ceEEEeEEEEeC---------CeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-------
Q 006275 97 GVKLENISKSYK---------GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------- 160 (652)
Q Consensus 97 ~i~v~~ls~~y~---------~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------- 160 (652)
+|+++|++|.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 589999999997 3679999999999999999999999999999999999999999999998752
Q ss_pred ------ceEEEEeccCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCCh
Q 006275 161 ------MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNL 232 (652)
Q Consensus 161 ------~~i~~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (652)
..++|++|++. +.+..|+.+|+...... +. ..+.
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~--------------~~------------------------~~~~ 124 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRH--------------LL------------------------SLDK 124 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHh--------------hc------------------------cCCH
Confidence 25999999973 44567999887421100 00 0001
Q ss_pred hcHHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCe
Q 006275 233 DTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVP 308 (652)
Q Consensus 233 ~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~t 308 (652)
.....++.++++.+|+.+...++.+.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|++ .+.|
T Consensus 125 ~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~t 204 (268)
T PRK10419 125 AERLARASEMLRAVDLDDSVLDKRPPQLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTA 204 (268)
T ss_pred HHHHHHHHHHHHHcCCChhHhhCCCccCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcE
Confidence 112335667888889865567889999999999999999999999999999999999999999988887642 4889
Q ss_pred EEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHH
Q 006275 309 MVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (652)
Q Consensus 309 vIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~ 343 (652)
||++||+++++..+||++++|++|++. ..|+.++
T Consensus 205 iiivsH~~~~i~~~~d~i~~l~~G~i~-~~g~~~~ 238 (268)
T PRK10419 205 CLFITHDLRLVERFCQRVMVMDNGQIV-ETQPVGD 238 (268)
T ss_pred EEEEECCHHHHHHhCCEEEEEECCEEe-eeCChhh
Confidence 999999999999999999999999874 5565444
No 312
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-40 Score=335.76 Aligned_cols=208 Identities=19% Similarity=0.296 Sum_probs=168.3
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCC-----CCcEEEECCCC-----------
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN----------- 160 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~i~~~~~~----------- 160 (652)
.|+++|+++.|+++++|+++||+|++|++++|+||||||||||+++|+|+++| ++|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~ 82 (249)
T PRK14253 3 KFNIENLDLFYGENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLR 82 (249)
T ss_pred eEEEeccEEEECCeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHH
Confidence 58999999999988899999999999999999999999999999999999986 59999998732
Q ss_pred ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHH
Q 006275 161 MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVS 240 (652)
Q Consensus 161 ~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 240 (652)
..++|++|++.++. .|+.||+....... .. .......+++.
T Consensus 83 ~~i~~~~q~~~~~~-~tv~~~l~~~~~~~---------------~~-----------------------~~~~~~~~~~~ 123 (249)
T PRK14253 83 IKVGMVFQKPNPFP-MSIYENVAYGLRAQ---------------GI-----------------------KDKKVLDEVVE 123 (249)
T ss_pred hheeEEecCCCcCc-ccHHHHHHhHHHhc---------------CC-----------------------CchHHHHHHHH
Confidence 24999999988765 89999985321100 00 00001122334
Q ss_pred HHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecC
Q 006275 241 KLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHD 315 (652)
Q Consensus 241 ~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd 315 (652)
++++.+|+.. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .+.|||++||+
T Consensus 124 ~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~ 203 (249)
T PRK14253 124 RSLRGAALWDEVKDRLKSHAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHS 203 (249)
T ss_pred HHHHHcCCchhhhHHhhcCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecC
Confidence 4555555532 345778899999999999999999999999999999999999999999888753 36899999999
Q ss_pred HHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 316 RAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 316 ~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
++++..+||++++|++|++. ..|+.+++
T Consensus 204 ~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 231 (249)
T PRK14253 204 MQQARRISDRTAFFLMGELV-EHDDTQVI 231 (249)
T ss_pred HHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 99999999999999999984 55665543
No 313
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-40 Score=341.55 Aligned_cols=205 Identities=27% Similarity=0.361 Sum_probs=171.8
Q ss_pred EEEEEeeeeEeCC-----eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------
Q 006275 424 VVTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~-----~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------- 489 (652)
.|+++||+++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (280)
T PRK13649 2 GINLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIK 81 (280)
T ss_pred eEEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHH
Confidence 3899999999974 36999999999999999999999999999999999999999999999997652
Q ss_pred -----cceecccccccCCCCCCHHHHHHHhhhh--cc----HHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHH
Q 006275 490 -----PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (652)
Q Consensus 490 -----~~~~~~~~~~~~~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral 558 (652)
.+|++|+....+ +..|+.+|+.+.... .. ...+.++++.+++.....++++.+||||||||++|||||
T Consensus 82 ~~~~~i~~~~q~~~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al 160 (280)
T PRK13649 82 QIRKKVGLVFQFPESQL-FEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESLFEKNPFELSGGQMRRVAIAGIL 160 (280)
T ss_pred HHHhheEEEeeChhhhh-ccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHH
Confidence 134454421123 346999999764321 11 223567889999964567899999999999999999999
Q ss_pred ccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
+.+|++|||||||++||+.+++.+.+.|.++ +.|||+||||++++..+||++++|++|++.. .|++++..+
T Consensus 161 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~ 234 (280)
T PRK13649 161 AMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVL-SGKPKDIFQ 234 (280)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEE-eCCHHHHhc
Confidence 9999999999999999999999999998865 4699999999999999999999999999974 577766543
No 314
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.1e-40 Score=319.86 Aligned_cols=210 Identities=27% Similarity=0.438 Sum_probs=172.3
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCc-----------eEE
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM-----------KIA 164 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~-----------~i~ 164 (652)
++++++|++..|+...+|++|||++++||+++|+|+||+||||||++|+|+.++.+|+|.++|.+. .|+
T Consensus 2 ~mL~v~~l~~~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi~ 81 (237)
T COG0410 2 PMLEVENLSAGYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGIA 81 (237)
T ss_pred CceeEEeEeecccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCeE
Confidence 469999999999999999999999999999999999999999999999999999999999998643 599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhh
Q 006275 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (652)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (652)
||||.-.+++.+||.||+..+....... ..... + + +.+-++..
T Consensus 82 ~VPegR~iF~~LTVeENL~~g~~~~~~~------------~~~~~-~-~-----------------------e~v~~lFP 124 (237)
T COG0410 82 YVPEGRRIFPRLTVEENLLLGAYARRDK------------EAQER-D-L-----------------------EEVYELFP 124 (237)
T ss_pred eCcccccchhhCcHHHHHhhhhhccccc------------ccccc-c-H-----------------------HHHHHHCh
Confidence 9999999999999999986432110000 00000 0 0 01111111
Q ss_pred hcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHH
Q 006275 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLD 320 (652)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~l~ 320 (652)
.+ .+..+++..+|||||||.++|||||+.+|++|||||||.||-|.-.+.+.+.++ +.|.||++|.++..++.
T Consensus 125 ~L---ker~~~~aG~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al 201 (237)
T COG0410 125 RL---KERRNQRAGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFAL 201 (237)
T ss_pred hH---HHHhcCcccCCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHH
Confidence 11 145677789999999999999999999999999999999999999999887763 34779999999999999
Q ss_pred hhcCeEEEEcCCeEEEecCChHHHHH
Q 006275 321 QLCTKIVETEMGVSRTYEGNYSQYVL 346 (652)
Q Consensus 321 ~~~d~ii~l~~G~~~~~~g~~~~~~~ 346 (652)
+++||.++|++|++ ++.|+.+++..
T Consensus 202 ~iaDr~yvle~Gri-v~~G~~~eL~~ 226 (237)
T COG0410 202 EIADRGYVLENGRI-VLSGTAAELLA 226 (237)
T ss_pred HhhCEEEEEeCCEE-EEecCHHHHhc
Confidence 99999999999998 58898766543
No 315
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1e-39 Score=346.87 Aligned_cols=210 Identities=22% Similarity=0.345 Sum_probs=177.4
Q ss_pred CCCcEEEEEeeeeEeC----CeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeEEEECceecc---
Q 006275 420 SGRSVVTIKNLEFGYE----DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR---GGEVLLGEHNVL--- 489 (652)
Q Consensus 420 ~~~~~i~~~~v~~~y~----~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~---~G~i~~~g~~~~--- 489 (652)
..+++|+++|+++.|+ ...+++|+||+|++||++||+|+||||||||+++|+|+++|. +|+|.++|.++.
T Consensus 8 ~~~~~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~ 87 (330)
T PRK09473 8 QADALLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLP 87 (330)
T ss_pred CCCceEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCC
Confidence 4456899999999995 357999999999999999999999999999999999999996 999999998752
Q ss_pred -----------cceecccccccCCCCCCHHHHHHHhhhh---c----cHHHHHHHHhhCCCCh--hhhccCcCCCCHHHH
Q 006275 490 -----------PNYFEQNQAEALDLDKTVLETVAEAAED---W----RIDDIKGLLGRCNFKA--DMLDRKVSLLSGGEK 549 (652)
Q Consensus 490 -----------~~~~~~~~~~~~~~~~tv~e~~~~~~~~---~----~~~~~~~~L~~~~l~~--~~~~~~~~~LSgGqr 549 (652)
.++++|+....+++.+++.+++...... . ....+.++|+.+++.. ...++++.+||||||
T Consensus 88 ~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~~~~~p~~LSgG~~ 167 (330)
T PRK09473 88 EKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMR 167 (330)
T ss_pred HHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChHHHhcCCcccCCHHHH
Confidence 2355666544677889999888653211 1 1245778899999863 235789999999999
Q ss_pred HHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCCh
Q 006275 550 ARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDY 625 (652)
Q Consensus 550 qrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~ 625 (652)
|||+|||||+.+|+|||+||||++||+.++..+.++|+++ +.|+|+||||++.+.++||||++|++|+|++ .|+.
T Consensus 168 QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive-~g~~ 246 (330)
T PRK09473 168 QRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTME-YGNA 246 (330)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEE-ECCH
Confidence 9999999999999999999999999999999999988754 5699999999999999999999999999985 5777
Q ss_pred hhHhh
Q 006275 626 NVCFT 630 (652)
Q Consensus 626 ~~~~~ 630 (652)
+++++
T Consensus 247 ~~i~~ 251 (330)
T PRK09473 247 RDVFY 251 (330)
T ss_pred HHHHh
Confidence 76653
No 316
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.9e-40 Score=332.91 Aligned_cols=201 Identities=24% Similarity=0.359 Sum_probs=169.7
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-----------ccee
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PNYF 493 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~~~ 493 (652)
|+++||++.|+++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~ 80 (230)
T TIGR03410 1 LEVSNLNVYYGQSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIAYV 80 (230)
T ss_pred CEEEeEEEEeCCeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeEEe
Confidence 47899999999889999999999999999999999999999999999999999999999997652 1244
Q ss_pred cccccccCCCCCCHHHHHHHhhhhc---cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCC
Q 006275 494 EQNQAEALDLDKTVLETVAEAAEDW---RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (652)
Q Consensus 494 ~~~~~~~~~~~~tv~e~~~~~~~~~---~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEP 570 (652)
+|. ..+++..|+.+|+....... ......++++.++......++++.+||||||||++|||||+.+|++||||||
T Consensus 81 ~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~illlDEP 158 (230)
T TIGR03410 81 PQG--REIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPVLKEMLGRRGGDLSGGQQQQLAIARALVTRPKLLLLDEP 158 (230)
T ss_pred ccC--CcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHhHHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEecCC
Confidence 443 34566789999997653221 1223466677776324567899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhH
Q 006275 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVC 628 (652)
Q Consensus 571 t~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~ 628 (652)
|++||+.++..+.++|.+. +.|||+||||++++..+||+++++++|++.. .|+.++.
T Consensus 159 t~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~-~~~~~~~ 219 (230)
T TIGR03410 159 TEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVA-SGAGDEL 219 (230)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCHHHc
Confidence 9999999999999999864 4699999999999999999999999999974 5666543
No 317
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=335.08 Aligned_cols=209 Identities=19% Similarity=0.278 Sum_probs=167.5
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCC-----CcEEEECCCC----------
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD-----SGNVIKAKSN---------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~-----~G~i~~~~~~---------- 160 (652)
+.|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.+
T Consensus 3 ~~l~~~~l~~~~~~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~ 82 (251)
T PRK14249 3 PKIKIRGVNFFYHKHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVN 82 (251)
T ss_pred ceEEEEEEEEEECCeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHH
Confidence 3589999999998888999999999999999999999999999999999999997 6999987632
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
..++|++|++.+++ .|+.||+....... .. ......+..
T Consensus 83 ~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---------------~~-----------------------~~~~~~~~~ 123 (251)
T PRK14249 83 LRKRVGMVFQQPNPFP-KSIFDNVAFGPRML---------------GT-----------------------TAQSRLDEV 123 (251)
T ss_pred hhceEEEEecCCccCc-CcHHHHHhhHHHhc---------------CC-----------------------ChhhHHHHH
Confidence 25999999998765 59999985321000 00 000001122
Q ss_pred HHHHhhhcCCC---cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006275 239 VSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (652)
Q Consensus 239 i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (652)
+.+++..+|+. ....++.+.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .++|||+||
T Consensus 124 ~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivs 203 (251)
T PRK14249 124 VEKSLRQAALWDEVKDNLHKSGLALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVT 203 (251)
T ss_pred HHHHHHHhCCchhhhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 33334444442 1345778999999999999999999999999999999999999999999888753 478999999
Q ss_pred cCHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
|+++++..+||++++|++|++. ..|+.++.
T Consensus 204 h~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 233 (251)
T PRK14249 204 HNMQQAARASDWTGFLLTGDLV-EYGRTGEI 233 (251)
T ss_pred CCHHHHHhhCCEEEEEeCCeEE-EeCCHHHH
Confidence 9999999999999999999984 55665554
No 318
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-40 Score=340.22 Aligned_cols=208 Identities=24% Similarity=0.402 Sum_probs=172.7
Q ss_pred CceEEEeEEEEeCC--eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceE
Q 006275 96 SGVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKI 163 (652)
Q Consensus 96 ~~i~v~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i 163 (652)
++|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.. ..+
T Consensus 6 ~~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 6 SIIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred ceEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 46999999999975 359999999999999999999999999999999999999999999998743 259
Q ss_pred EEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHH
Q 006275 164 AFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (652)
Q Consensus 164 ~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (652)
+|++|++. .++..|+.+|+....... ..........+.++
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~ 126 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENH---------------------------------------AVPYDEMHRRVSEA 126 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhc---------------------------------------CCCHHHHHHHHHHH
Confidence 99999985 556778988874221000 00011123345677
Q ss_pred hhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHH
Q 006275 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAF 318 (652)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~ 318 (652)
++.+|+. +..++.+.+||||||||++|||||+.+|++|||||||+|||+.+++.+.++|++ .|+|||+|||++++
T Consensus 127 l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~ 205 (269)
T PRK13648 127 LKQVDML-ERADYEPNALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSE 205 (269)
T ss_pred HHHcCCc-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchH
Confidence 8888886 567888999999999999999999999999999999999999999999888753 48899999999999
Q ss_pred HHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 319 LDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 319 l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
+.. ||+|++|++|++. +.|+.+++.
T Consensus 206 ~~~-~d~i~~l~~G~i~-~~g~~~~~~ 230 (269)
T PRK13648 206 AME-ADHVIVMNKGTVY-KEGTPTEIF 230 (269)
T ss_pred Hhc-CCEEEEEECCEEE-EecCHHHHh
Confidence 975 9999999999984 567765543
No 319
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-40 Score=342.04 Aligned_cols=204 Identities=28% Similarity=0.421 Sum_probs=173.8
Q ss_pred EEEEEeeeeEeCC---eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------c
Q 006275 424 VVTIKNLEFGYED---RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------P 490 (652)
Q Consensus 424 ~i~~~~v~~~y~~---~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~ 490 (652)
+|+++||+++|++ +.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 6999999999963 46999999999999999999999999999999999999999999999998762 2
Q ss_pred ceecccccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCe
Q 006275 491 NYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (652)
Q Consensus 491 ~~~~~~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~l 564 (652)
+|++|+.. ...+..|+.+|+.+.... .....+.++++.+|+. +..++++.+||||||||++|||||+.+|++
T Consensus 84 ~~v~q~~~-~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LSgGq~qrv~lAral~~~p~l 161 (279)
T PRK13650 84 GMVFQNPD-NQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQ-DFKEREPARLSGGQKQRVAIAGAVAMRPKI 161 (279)
T ss_pred eEEEcChH-HhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCH-hHhhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 35555431 234568999999865321 1124578899999995 678999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 565 LVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 565 LlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
|||||||++||+.++..+.++|+++ +.|||+||||++++. +|||+++|++|++.. .|++++....
T Consensus 162 LlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~-~~dri~~l~~G~i~~-~g~~~~~~~~ 230 (279)
T PRK13650 162 IILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVA-LSDRVLVMKNGQVES-TSTPRELFSR 230 (279)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEE-ECCHHHHHcC
Confidence 9999999999999999999998754 469999999999995 799999999999974 5777765443
No 320
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-40 Score=342.16 Aligned_cols=208 Identities=22% Similarity=0.323 Sum_probs=172.7
Q ss_pred CceEEEeEEEEeCC------eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------
Q 006275 96 SGVKLENISKSYKG------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------- 160 (652)
.+|+++|++++|++ +++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 82 (280)
T PRK13633 3 EMIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWD 82 (280)
T ss_pred ceEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHH
Confidence 36999999999963 469999999999999999999999999999999999999999999998732
Q ss_pred --ceEEEEeccCcc-CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHH
Q 006275 161 --MKIAFLSQEFEV-SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (652)
Q Consensus 161 --~~i~~v~Q~~~~-~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (652)
..++|++|++.. .+..|+.+|+...... ..........
T Consensus 83 ~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~---------------------------------------~~~~~~~~~~ 123 (280)
T PRK13633 83 IRNKAGMVFQNPDNQIVATIVEEDVAFGPEN---------------------------------------LGIPPEEIRE 123 (280)
T ss_pred HhhheEEEecChhhhhccccHHHHHHhhHhh---------------------------------------cCCCHHHHHH
Confidence 248999999742 2346898887522100 0011112344
Q ss_pred HHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEe
Q 006275 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIIS 313 (652)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivs 313 (652)
.+.++++.+|+. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.++..+.++|++ .|.|||++|
T Consensus 124 ~~~~~l~~~gL~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvt 202 (280)
T PRK13633 124 RVDESLKKVGMY-EYRRHAPHLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILIT 202 (280)
T ss_pred HHHHHHHHCCCH-hHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 567788899996 678899999999999999999999999999999999999999999999888743 489999999
Q ss_pred cCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
|+++++.. ||+++++++|++. ..|+.+++.
T Consensus 203 H~~~~~~~-~d~v~~l~~G~i~-~~g~~~~~~ 232 (280)
T PRK13633 203 HYMEEAVE-ADRIIVMDSGKVV-MEGTPKEIF 232 (280)
T ss_pred cChHHHhc-CCEEEEEECCEEE-EecCHHHHh
Confidence 99999976 9999999999974 667766654
No 321
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=8.5e-40 Score=337.70 Aligned_cols=202 Identities=25% Similarity=0.403 Sum_probs=174.7
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeEEEECceecc----------
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR---GGEVLLGEHNVL---------- 489 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~---~G~i~~~g~~~~---------- 489 (652)
++|+++||++.|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++.
T Consensus 3 ~~l~~~nl~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (262)
T PRK09984 3 TIIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIR 82 (262)
T ss_pred cEEEEeeEEEEeCCeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHH
Confidence 4799999999999889999999999999999999999999999999999999886 499999997652
Q ss_pred -----cceecccccccCCCCCCHHHHHHHhhh--------------hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHH
Q 006275 490 -----PNYFEQNQAEALDLDKTVLETVAEAAE--------------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKA 550 (652)
Q Consensus 490 -----~~~~~~~~~~~~~~~~tv~e~~~~~~~--------------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrq 550 (652)
.+|++|+ ..+++..|+.+|+..... ......+.++++.+++. ...++++.+|||||||
T Consensus 83 ~~~~~i~~~~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~q 159 (262)
T PRK09984 83 KSRANTGYIFQQ--FNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMV-HFAHQRVSTLSGGQQQ 159 (262)
T ss_pred HHHhheEEEccc--cccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCH-HHHhCCccccCHHHHH
Confidence 1344443 345667899999975421 01123578899999994 6789999999999999
Q ss_pred HHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChh
Q 006275 551 RLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYN 626 (652)
Q Consensus 551 rv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~ 626 (652)
||+|||||+.+|+||||||||++||+.+++.+.+.|+++ +.|||+||||++++..+||++++|++|++. +.|+++
T Consensus 160 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~-~~g~~~ 238 (262)
T PRK09984 160 RVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVF-YDGSSQ 238 (262)
T ss_pred HHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHH
Confidence 999999999999999999999999999999999999865 469999999999999999999999999996 568877
Q ss_pred hH
Q 006275 627 VC 628 (652)
Q Consensus 627 ~~ 628 (652)
++
T Consensus 239 ~~ 240 (262)
T PRK09984 239 QF 240 (262)
T ss_pred Hh
Confidence 65
No 322
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-40 Score=338.28 Aligned_cols=204 Identities=28% Similarity=0.390 Sum_probs=175.7
Q ss_pred CcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------cc
Q 006275 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PN 491 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~ 491 (652)
..+|+++|++++|+++.+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 5 ~~~l~i~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (265)
T PRK10253 5 VARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRIG 84 (265)
T ss_pred ccEEEEEEEEEEECCEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhheE
Confidence 45699999999999889999999999999999999999999999999999999999999999997652 23
Q ss_pred eecccccccCCCCCCHHHHHHHhh-h---------hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccC
Q 006275 492 YFEQNQAEALDLDKTVLETVAEAA-E---------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKP 561 (652)
Q Consensus 492 ~~~~~~~~~~~~~~tv~e~~~~~~-~---------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~ 561 (652)
|++|+ ..+++..|+.+|+.... . ......+.++++.+++. +..++++.+||||||||++|||||+.+
T Consensus 85 ~v~q~--~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~Gq~qrv~laral~~~ 161 (265)
T PRK10253 85 LLAQN--ATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGIT-HLADQSVDTLSGGQRQRAWIAMVLAQE 161 (265)
T ss_pred Eeecc--CcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCH-HHhcCCcccCChHHHHHHHHHHHHhcC
Confidence 44544 34556789999987631 1 11123567889999994 678999999999999999999999999
Q ss_pred CCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 562 STLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 562 p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|++. ..|++++..
T Consensus 162 p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 232 (265)
T PRK10253 162 TAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIV-AQGAPKEIV 232 (265)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHh
Confidence 9999999999999999999999998764 459999999999999999999999999987 457776654
No 323
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=7.3e-40 Score=330.30 Aligned_cols=195 Identities=27% Similarity=0.392 Sum_probs=163.1
Q ss_pred ceEEEeEEEEeCC-------eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEEC--CC--C-----
Q 006275 97 GVKLENISKSYKG-------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKA--KS--N----- 160 (652)
Q Consensus 97 ~i~v~~ls~~y~~-------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~--~~--~----- 160 (652)
+|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++ |. +
T Consensus 1 ml~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~ 80 (224)
T TIGR02324 1 LLEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQAS 80 (224)
T ss_pred CEEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcC
Confidence 3789999999962 469999999999999999999999999999999999999999999997 31 1
Q ss_pred ---------ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCC
Q 006275 161 ---------MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVN 231 (652)
Q Consensus 161 ---------~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (652)
..++|++|++.+++..|+.||+...+.. . ...
T Consensus 81 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~--------------~-------------------------~~~ 121 (224)
T TIGR02324 81 PREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLE--------------R-------------------------GVP 121 (224)
T ss_pred HHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHH--------------c-------------------------CCC
Confidence 2599999999888888999998532100 0 000
Q ss_pred hhcHHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCe
Q 006275 232 LDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVP 308 (652)
Q Consensus 232 ~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~t 308 (652)
.....+++.++++.+|+.....++++.+||||||||++|||||+.+|++|||||||+|||+.+++.+.++|++ .|+|
T Consensus 122 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~t 201 (224)
T TIGR02324 122 REAARARARELLARLNIPERLWHLPPATFSGGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAA 201 (224)
T ss_pred HHHHHHHHHHHHHHcCCchhhhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCE
Confidence 1112345567788889864455788999999999999999999999999999999999999999999888753 5889
Q ss_pred EEEEecCHHHHHhhcCeEEEEc
Q 006275 309 MVIISHDRAFLDQLCTKIVETE 330 (652)
Q Consensus 309 vIivsHd~~~l~~~~d~ii~l~ 330 (652)
||+|||+.+++..+||+++.+.
T Consensus 202 ii~vsH~~~~~~~~~d~i~~~~ 223 (224)
T TIGR02324 202 LIGIFHDEEVRELVADRVMDVT 223 (224)
T ss_pred EEEEeCCHHHHHHhcceeEecC
Confidence 9999999999999999998763
No 324
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.1e-39 Score=370.71 Aligned_cols=213 Identities=34% Similarity=0.526 Sum_probs=181.5
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccC-ccC
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEF-EVS 173 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~-~~~ 173 (652)
..+|+++|++++|+++++|+||||+|++|++++|+||||||||||+++|+|+++|++|+|.++ ...+|||++|++ .++
T Consensus 322 ~~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~-~~~~i~~v~q~~~~~~ 400 (556)
T PRK11819 322 DKVIEAENLSKSFGDRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIG-ETVKLAYVDQSRDALD 400 (556)
T ss_pred CeEEEEEeEEEEECCeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEC-CceEEEEEeCchhhcC
Confidence 357999999999998889999999999999999999999999999999999999999999985 455899999996 566
Q ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccc
Q 006275 174 MSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDG 253 (652)
Q Consensus 174 ~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~ 253 (652)
+..|++||+....... . ... ....+..+++.+|+.....
T Consensus 401 ~~~tv~e~l~~~~~~~--------------~-------------------------~~~--~~~~~~~~l~~~~l~~~~~ 439 (556)
T PRK11819 401 PNKTVWEEISGGLDII--------------K-------------------------VGN--REIPSRAYVGRFNFKGGDQ 439 (556)
T ss_pred CCCCHHHHHHhhcccc--------------c-------------------------ccc--cHHHHHHHHHhCCCChhHh
Confidence 7789999985321000 0 000 0112345788889864457
Q ss_pred cCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcC-C
Q 006275 254 DRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEM-G 332 (652)
Q Consensus 254 ~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~ii~l~~-G 332 (652)
++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++.+.|||+||||++++..+||+|+++++ |
T Consensus 440 ~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vtHd~~~~~~~~d~i~~l~~~g 519 (556)
T PRK11819 440 QKKVGVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFPGCAVVISHDRWFLDRIATHILAFEGDS 519 (556)
T ss_pred cCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCCCeEEEEECCHHHHHHhCCEEEEEECCC
Confidence 889999999999999999999999999999999999999999999999987766999999999999999999999986 7
Q ss_pred eEEEecCChHHHHHHHH
Q 006275 333 VSRTYEGNYSQYVLEKA 349 (652)
Q Consensus 333 ~~~~~~g~~~~~~~~~~ 349 (652)
.+..+.|+|++|...+.
T Consensus 520 ~~~~~~g~~~~~~~~~~ 536 (556)
T PRK11819 520 QVEWFEGNFQEYEEDKK 536 (556)
T ss_pred eEEEecCCHHHHHHHHH
Confidence 87778999998876543
No 325
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-40 Score=339.92 Aligned_cols=205 Identities=27% Similarity=0.402 Sum_probs=174.3
Q ss_pred cEEEEEeeeeEeC-CeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------cc
Q 006275 423 SVVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PN 491 (652)
Q Consensus 423 ~~i~~~~v~~~y~-~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~ 491 (652)
.+++++|++++|+ .+.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 2 ~~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 2 HLIETRDLCYSYSGSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred ceEEEEEEEEEeCCCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 3689999999996 457999999999999999999999999999999999999999999999998653 23
Q ss_pred eecccccccCCCCCCHHHHHHHhhhh--cc----HHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeE
Q 006275 492 YFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (652)
Q Consensus 492 ~~~~~~~~~~~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lL 565 (652)
|++|+... ..+..|+.+|+...... .. ...+.++++.+++. +..++++.+||||||||++|||||+.+|++|
T Consensus 82 ~v~q~~~~-~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~Gq~qrl~laraL~~~p~ll 159 (277)
T PRK13652 82 LVFQNPDD-QIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLE-ELRDRVPHHLSGGEKKRVAIAGVIAMEPQVL 159 (277)
T ss_pred EEecCccc-ccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCCh-hHhcCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 44444321 23467999999754321 11 23467889999995 6789999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 566 VLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 566 lLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||||||++||+.++..+.++|++. +.|||++|||++++.++|||+++|++|++. +.|+++++.+
T Consensus 160 ilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~-~~g~~~~~~~ 227 (277)
T PRK13652 160 VLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIV-AYGTVEEIFL 227 (277)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEE-EECCHHHHhc
Confidence 999999999999999999998753 569999999999999999999999999997 4688877654
No 326
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-40 Score=377.27 Aligned_cols=207 Identities=30% Similarity=0.497 Sum_probs=178.1
Q ss_pred CCCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccC--c
Q 006275 94 ISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEF--E 171 (652)
Q Consensus 94 ~~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~--~ 171 (652)
...+|+++|++++|+++++|+|+||+|++|+++||+|||||||||||++|+|+++|++|+|.+++ ..+|||++|++ .
T Consensus 309 ~~~~l~~~~l~~~y~~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~-~~~igy~~Q~~~~~ 387 (638)
T PRK10636 309 PNPLLKMEKVSAGYGDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAK-GIKLGYFAQHQLEF 387 (638)
T ss_pred CCceEEEEeeEEEeCCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECC-CEEEEEecCcchhh
Confidence 34579999999999988899999999999999999999999999999999999999999999863 35799999974 2
Q ss_pred cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcc
Q 006275 172 VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTAD 251 (652)
Q Consensus 172 ~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~ 251 (652)
+....|+.+++... ........+.+++..+|+...
T Consensus 388 l~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~L~~~~l~~~ 422 (638)
T PRK10636 388 LRADESPLQHLARL---------------------------------------------APQELEQKLRDYLGGFGFQGD 422 (638)
T ss_pred CCccchHHHHHHHh---------------------------------------------CchhhHHHHHHHHHHcCCChh
Confidence 33344555543210 000113456678889999655
Q ss_pred cccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcC
Q 006275 252 DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEM 331 (652)
Q Consensus 252 ~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~ii~l~~ 331 (652)
..++++.+|||||||||+|||+|+.+|+||||||||||||+.++..|.++|++.+.|||+||||++++..+||+|+++++
T Consensus 423 ~~~~~~~~LSgGekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~gtvi~vSHd~~~~~~~~d~i~~l~~ 502 (638)
T PRK10636 423 KVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDFEGALVVVSHDRHLLRSTTDDLYLVHD 502 (638)
T ss_pred HhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHhCCEEEEEEC
Confidence 67899999999999999999999999999999999999999999999999988778999999999999999999999999
Q ss_pred CeEEEecCChHHHHH
Q 006275 332 GVSRTYEGNYSQYVL 346 (652)
Q Consensus 332 G~~~~~~g~~~~~~~ 346 (652)
|++..+.|+|++|..
T Consensus 503 G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 503 GKVEPFDGDLEDYQQ 517 (638)
T ss_pred CEEEEcCCCHHHHHH
Confidence 998779999999853
No 327
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-40 Score=332.44 Aligned_cols=202 Identities=27% Similarity=0.447 Sum_probs=172.9
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------cceecc
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQ 495 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~~ 495 (652)
+|+++||+++|++.. .++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|
T Consensus 1 ~l~~~~l~~~~~~~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 78 (232)
T PRK10771 1 MLKLTDITWLYHHLP--MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPVSMLFQ 78 (232)
T ss_pred CeEEEEEEEEECCcc--ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccEEEEec
Confidence 478999999997643 4999999999999999999999999999999999999999999998652 234444
Q ss_pred cccccCCCCCCHHHHHHHhhh------hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeC
Q 006275 496 NQAEALDLDKTVLETVAEAAE------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (652)
Q Consensus 496 ~~~~~~~~~~tv~e~~~~~~~------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDE 569 (652)
. ..+++..|+.+|+..... .....++.++++.+|+. ...++++.+||||||||++||||++.+|++|||||
T Consensus 79 ~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDE 155 (232)
T PRK10771 79 E--NNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIE-DLLARLPGQLSGGQRQRVALARCLVREQPILLLDE 155 (232)
T ss_pred c--cccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcH-HHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 3 346667899999975321 11234578899999994 67899999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 570 PTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 570 Pt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
||++||+.++..+.++|.+. +.|||+||||++++..+||++++|++|++. +.|+++++.+.
T Consensus 156 P~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~-~~g~~~~~~~~ 220 (232)
T PRK10771 156 PFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIA-WDGPTDELLSG 220 (232)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHhC
Confidence 99999999999999988754 459999999999999999999999999997 56888777643
No 328
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=338.03 Aligned_cols=196 Identities=20% Similarity=0.315 Sum_probs=160.7
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC-----CCCcEEEECCCC---------
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN--------- 160 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~i~~~~~~--------- 160 (652)
..+|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++ |++|+|.++|.+
T Consensus 11 ~~~l~i~nl~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~ 90 (269)
T PRK14259 11 NIIISLQNVTISYGTFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPV 90 (269)
T ss_pred CceEEEEeEEEEECCEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHH
Confidence 346999999999998889999999999999999999999999999999999987 689999998742
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHH
Q 006275 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (652)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (652)
..++|++|++.+++ .|++||+....... . .. ...++
T Consensus 91 ~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~---------------~------------------------~~-~~~~~ 129 (269)
T PRK14259 91 EVRRRIGMVFQQPNPFP-KSIYENIAFGARIN---------------G------------------------YT-GDMDE 129 (269)
T ss_pred HHhhceEEEccCCccch-hhHHHHHhhhhhhc---------------C------------------------Cc-HHHHH
Confidence 25999999987765 59999985321000 0 00 00112
Q ss_pred HHHHHhhhcCCC---cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 006275 238 KVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (652)
Q Consensus 238 ~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIiv 312 (652)
.+.++++.+++. ....++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .+.|||++
T Consensus 130 ~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiiv 209 (269)
T PRK14259 130 LVERSLRKAAVWDECKDKLNESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIV 209 (269)
T ss_pred HHHHHHHHhCCcchhhhhhCCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 233444555442 1346778899999999999999999999999999999999999999999988753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEcC
Q 006275 313 SHDRAFLDQLCTKIVETEM 331 (652)
Q Consensus 313 sHd~~~l~~~~d~ii~l~~ 331 (652)
||+++++..+||++++|++
T Consensus 210 tH~~~~~~~~~d~i~~l~~ 228 (269)
T PRK14259 210 THNMQQAVRVSDMTAFFNA 228 (269)
T ss_pred eCCHHHHHHhcCEEEEEec
Confidence 9999999999999999997
No 329
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=5.3e-40 Score=326.66 Aligned_cols=190 Identities=23% Similarity=0.339 Sum_probs=163.5
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------ceEEEEe
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLS 167 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------~~i~~v~ 167 (652)
+|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|++
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~~~~~~~~~~~~ 80 (204)
T PRK13538 1 MLEARNLACERDERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQRDEYHQDLLYLG 80 (204)
T ss_pred CeEEEEEEEEECCEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccchHHhhhheEEeC
Confidence 3789999999998889999999999999999999999999999999999999999999998743 2599999
Q ss_pred ccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcC
Q 006275 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (652)
Q Consensus 168 Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (652)
|++.+++..|+.||+...... .. .....++.++++.+|
T Consensus 81 ~~~~~~~~~tv~e~l~~~~~~-----------------------------------------~~-~~~~~~~~~~l~~~g 118 (204)
T PRK13538 81 HQPGIKTELTALENLRFYQRL-----------------------------------------HG-PGDDEALWEALAQVG 118 (204)
T ss_pred CccccCcCCcHHHHHHHHHHh-----------------------------------------cC-ccHHHHHHHHHHHcC
Confidence 998877788999998522100 00 011234567788889
Q ss_pred CCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcC
Q 006275 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCT 324 (652)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~~d 324 (652)
+. +..++++.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|||++||+++++..+.+
T Consensus 119 l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~ 197 (204)
T PRK13538 119 LA-GFEDVPVRQLSAGQQRRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKV 197 (204)
T ss_pred CH-HHhhCChhhcCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCc
Confidence 86 467888999999999999999999999999999999999999999999988753 48899999999999998888
Q ss_pred eEEEE
Q 006275 325 KIVET 329 (652)
Q Consensus 325 ~ii~l 329 (652)
|++.+
T Consensus 198 ~~~~~ 202 (204)
T PRK13538 198 RKLRL 202 (204)
T ss_pred eEEec
Confidence 88776
No 330
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-40 Score=342.02 Aligned_cols=205 Identities=25% Similarity=0.382 Sum_probs=170.9
Q ss_pred cEEEEEeeeeEeCCe-----eeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------
Q 006275 423 SVVTIKNLEFGYEDR-----LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------- 489 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~-----~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------- 489 (652)
..|+++|++++|+++ .+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 359999999999764 4999999999999999999999999999999999999999999999997642
Q ss_pred -------cceecccccccCCCCCCHHHHHHHhhhh--cc----HHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHH
Q 006275 490 -------PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCK 556 (652)
Q Consensus 490 -------~~~~~~~~~~~~~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAr 556 (652)
.+|++|+....+ +..|+.+|+.+.... .. ...+.++++.+++.....++++.+||||||||++|||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~-~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~~LS~Gq~qrv~lar 163 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQL-FQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYVKRSPFELSGGQKRRVALAG 163 (289)
T ss_pred HHHHhccEEEEEeCcchhh-hhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhcCChhhCCHHHHHHHHHHH
Confidence 134444321122 346999999764321 11 2346678899998545778999999999999999999
Q ss_pred HHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
||+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++.++||++++|++|++.. .|+.++..
T Consensus 164 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 239 (289)
T PRK13645 164 IIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVIS-IGSPFEIF 239 (289)
T ss_pred HHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-eCCHHHHh
Confidence 999999999999999999999999999988754 4699999999999999999999999999974 46666543
No 331
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-39 Score=334.91 Aligned_cols=205 Identities=28% Similarity=0.382 Sum_probs=173.2
Q ss_pred CcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCeeEEEECceecc-------
Q 006275 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL------- 489 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~------- 489 (652)
..+|+++|+++.|+++++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 11 ~~~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~ 90 (260)
T PRK10744 11 PSKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIA 90 (260)
T ss_pred CceEEEEEEEEEeCCeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchH
Confidence 456999999999998889999999999999999999999999999999999986 58999999997752
Q ss_pred -----cceecccccccCCCCCCHHHHHHHhhhh---cc----HHHHHHHHhhCCCC---hhhhccCcCCCCHHHHHHHHH
Q 006275 490 -----PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAF 554 (652)
Q Consensus 490 -----~~~~~~~~~~~~~~~~tv~e~~~~~~~~---~~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqrqrv~L 554 (652)
.+|++|+ ..+++ .|+.+|+...... .. .+++.++++.+++. ....++++.+||||||||++|
T Consensus 91 ~~~~~i~~~~q~--~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~l 167 (260)
T PRK10744 91 LLRAKVGMVFQK--PTPFP-MSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKDKLHQSGYSLSGGQQQRLCI 167 (260)
T ss_pred HHhcceEEEecC--CccCc-CcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHHHHhcCCCCCCHHHHHHHHH
Confidence 1244443 23444 7999999764321 11 23467888888873 245688999999999999999
Q ss_pred HHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||||+.+|+||||||||++||+.+++.+.+.|+++ +.|||+||||++++..+||++++|++|++.. .|+.+++.+
T Consensus 168 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~ 244 (260)
T PRK10744 168 ARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIE-FGNTDTIFT 244 (260)
T ss_pred HHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHHh
Confidence 99999999999999999999999999999999876 3599999999999999999999999999974 577777654
No 332
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-40 Score=332.82 Aligned_cols=203 Identities=19% Similarity=0.267 Sum_probs=171.2
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceeccc-----------c
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP-----------N 491 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~-----------~ 491 (652)
++|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +
T Consensus 4 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 83 (237)
T PRK11614 4 VMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAVA 83 (237)
T ss_pred cEEEEEeEEEeeCCceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCEE
Confidence 46999999999988889999999999999999999999999999999999999999999999976521 2
Q ss_pred eecccccccCCCCCCHHHHHHHhhhhc----cHHHHHHHHhhC-CCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEE
Q 006275 492 YFEQNQAEALDLDKTVLETVAEAAEDW----RIDDIKGLLGRC-NFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (652)
Q Consensus 492 ~~~~~~~~~~~~~~tv~e~~~~~~~~~----~~~~~~~~L~~~-~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLl 566 (652)
|+.|+ ..+++..|+.+|+....... ....+.++++.+ ++ .+..++++.+||||||||++|||||+.+|+|||
T Consensus 84 ~~~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l-~~~~~~~~~~LS~G~~qrl~la~al~~~p~ill 160 (237)
T PRK11614 84 IVPEG--RRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRL-HERRIQRAGTMSGGEQQMLAIGRALMSQPRLLL 160 (237)
T ss_pred EeccC--cccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHH-HHHHhCchhhCCHHHHHHHHHHHHHHhCCCEEE
Confidence 33433 34556689999997642111 122355666666 35 345678999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 567 LDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 567 LDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
|||||++||+.++..+.+.|+++ +.|||++|||++++.++|||+++|++|++. +.|++++..
T Consensus 161 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 225 (237)
T PRK11614 161 LDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVV-LEDTGDALL 225 (237)
T ss_pred EcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEE-eeCCHHHHh
Confidence 99999999999999999998764 469999999999999999999999999997 467877664
No 333
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=333.97 Aligned_cols=205 Identities=27% Similarity=0.384 Sum_probs=172.5
Q ss_pred CcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCeeEEEECceecc-------
Q 006275 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL------- 489 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~------- 489 (652)
.++|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 4 ~~~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 4 PPKMEARGLSFFYGDFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred CcEEEEeeeEEEECCeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 457999999999988889999999999999999999999999999999999974 68999999997652
Q ss_pred -----cceecccccccCCCCCCHHHHHHHhhhh-------ccHHHHHHHHhhCCCCh---hhhccCcCCCCHHHHHHHHH
Q 006275 490 -----PNYFEQNQAEALDLDKTVLETVAEAAED-------WRIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAF 554 (652)
Q Consensus 490 -----~~~~~~~~~~~~~~~~tv~e~~~~~~~~-------~~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqrqrv~L 554 (652)
.+|++|+ ..+++ .|+.+|+.+.... ...+++.++++.+++.. ...++++.+|||||||||+|
T Consensus 84 ~~~~~i~~v~q~--~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~l 160 (253)
T PRK14242 84 ELRRRVGMVFQK--PNPFP-KSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKDRLHESALGLSGGQQQRLCI 160 (253)
T ss_pred HHhhcEEEEecC--CCCCc-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHHHH
Confidence 1344443 23444 5999999764321 11235677888888742 34678899999999999999
Q ss_pred HHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||||+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++.++||+|++|++|++. ..|..+++.+
T Consensus 161 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~~ 237 (253)
T PRK14242 161 ARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLI-EVGPTEQIFT 237 (253)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEE-EeCCHHHHHc
Confidence 99999999999999999999999999999999876 359999999999999999999999999997 4577776653
No 334
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=6.1e-40 Score=350.95 Aligned_cols=196 Identities=23% Similarity=0.373 Sum_probs=170.8
Q ss_pred eEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------------cceecccc
Q 006275 432 FGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------------PNYFEQNQ 497 (652)
Q Consensus 432 ~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------------~~~~~~~~ 497 (652)
+.|+++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|
T Consensus 1 ~~~~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q-- 78 (363)
T TIGR01186 1 KKTGGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQ-- 78 (363)
T ss_pred CccCCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEEC--
Confidence 4678888999999999999999999999999999999999999999999999998763 134444
Q ss_pred cccCCCCCCHHHHHHHhhhh--c----cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCC
Q 006275 498 AEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPT 571 (652)
Q Consensus 498 ~~~~~~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt 571 (652)
...+++.+|+.+|+.+.... + ..+.+.++++.+|+. ...++++.+|||||||||+|||||+.+|+||||||||
T Consensus 79 ~~~l~~~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~-~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~ 157 (363)
T TIGR01186 79 QFALFPHMTILQNTSLGPELLGWPEQERKEKALELLKLVGLE-EYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAF 157 (363)
T ss_pred CCcCCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCc-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 34677889999999875432 1 134578899999994 6789999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 572 NHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 572 ~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
++||+.++..+++.+.++ +.|||+||||++++..+||||++|++|++.. .|++++++..
T Consensus 158 saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~-~g~~~ei~~~ 220 (363)
T TIGR01186 158 SALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQ-VGTPDEILRN 220 (363)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEe-eCCHHHHHhC
Confidence 999999999999988754 5699999999999999999999999999974 5887776554
No 335
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-40 Score=353.86 Aligned_cols=202 Identities=23% Similarity=0.306 Sum_probs=169.2
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------------c
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------------P 490 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------------~ 490 (652)
+++.++.+.|+...+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 29 ~~~~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~i 108 (400)
T PRK10070 29 LSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKI 108 (400)
T ss_pred ccHHHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCE
Confidence 33344444444444899999999999999999999999999999999999999999999998752 2
Q ss_pred ceecccccccCCCCCCHHHHHHHhhhh--c----cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCe
Q 006275 491 NYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (652)
Q Consensus 491 ~~~~~~~~~~~~~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~l 564 (652)
+|++|+ ..+++.+|+.+|+.+.... + ...++.++++.+++. +..++++.+|||||||||+|||||+.+|++
T Consensus 109 gyv~Q~--~~l~~~~Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~-~~~~~~~~~LSgGq~QRv~LArAL~~~P~i 185 (400)
T PRK10070 109 AMVFQS--FALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLE-NYAHSYPDELSGGMRQRVGLARALAINPDI 185 (400)
T ss_pred EEEECC--CcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-hhhhcCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 344443 4567789999999875321 1 124577899999995 578999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 565 LVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 565 LlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
|||||||++||+.++..+++.|.++ +.|||+||||++++..+||+|++|++|++. ..|+++++..
T Consensus 186 LLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~-~~g~~~~l~~ 254 (400)
T PRK10070 186 LLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVV-QVGTPDEILN 254 (400)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEE-ecCCHHHHHh
Confidence 9999999999999999999998754 469999999999999999999999999997 4577776654
No 336
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.9e-40 Score=340.65 Aligned_cols=201 Identities=24% Similarity=0.313 Sum_probs=173.3
Q ss_pred EEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------------cc
Q 006275 426 TIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------------PN 491 (652)
Q Consensus 426 ~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------------~~ 491 (652)
.++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 26 ~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~ 105 (269)
T cd03294 26 SKEEILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKIS 105 (269)
T ss_pred hhhhhhhhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcEE
Confidence 5679999999999999999999999999999999999999999999999999999999997652 12
Q ss_pred eecccccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeE
Q 006275 492 YFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (652)
Q Consensus 492 ~~~~~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lL 565 (652)
|++|. ..+++..|+.+|+...... ....++.++++.+++. +..++++.+|||||||||+|||||+.+|+||
T Consensus 106 ~v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~Gq~qrv~lAral~~~p~il 182 (269)
T cd03294 106 MVFQS--FALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLE-GWEHKYPDELSGGMQQRVGLARALAVDPDIL 182 (269)
T ss_pred EEecC--cccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCH-hHhhCCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 33433 3456678999999764321 1123577889999994 6789999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 566 VLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 566 lLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||||||+|||+.+++.+.+.|.++ +.|||++|||++++.++||++++|++|++.. .|+.+++.+
T Consensus 183 lLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~-~g~~~~~~~ 250 (269)
T cd03294 183 LMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQ-VGTPEEILT 250 (269)
T ss_pred EEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEE-eCCHHHHHh
Confidence 999999999999999999998765 4699999999999999999999999999974 577777654
No 337
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1e-39 Score=329.07 Aligned_cols=198 Identities=29% Similarity=0.378 Sum_probs=171.7
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc------cceeccccc
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------PNYFEQNQA 498 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------~~~~~~~~~ 498 (652)
|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .++.+|.
T Consensus 1 l~l~~v~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~~~~~~~~~q~-- 78 (223)
T TIGR03740 1 LETKNLSKRFGKQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKDLHKIGSLIES-- 78 (223)
T ss_pred CEEEeEEEEECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccccccEEEEcCC--
Confidence 47899999999889999999999999999999999999999999999999999999999997652 2244443
Q ss_pred ccCCCCCCHHHHHHHhhh--hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCH
Q 006275 499 EALDLDKTVLETVAEAAE--DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 576 (652)
Q Consensus 499 ~~~~~~~tv~e~~~~~~~--~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~ 576 (652)
..+++..|+.+|+..... ......+.++++.+++. +..++++.+||||||||++||||++.+|++|||||||++||+
T Consensus 79 ~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~ 157 (223)
T TIGR03740 79 PPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLT-NTGKKKAKQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDP 157 (223)
T ss_pred CCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCc-HHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCH
Confidence 345567899999875432 12345678899999995 567899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChh
Q 006275 577 PSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYN 626 (652)
Q Consensus 577 ~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~ 626 (652)
.+++.+.++|.++ +.|||++|||++++..+|||+++|++|++.. .|++.
T Consensus 158 ~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~-~~~~~ 209 (223)
T TIGR03740 158 IGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGY-QGKIN 209 (223)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEE-ecChh
Confidence 9999999999865 3599999999999999999999999999974 46544
No 338
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.7e-40 Score=326.75 Aligned_cols=191 Identities=32% Similarity=0.482 Sum_probs=165.6
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------cceeccc
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQN 496 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~~~ 496 (652)
|+++|++++|+++.+ ++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|+
T Consensus 1 i~~~~l~~~~~~~~~--~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~ 78 (211)
T cd03298 1 VRLDKIRFSYGEQPM--HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSMLFQE 78 (211)
T ss_pred CEEEeEEEEeCCEec--ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEEecc
Confidence 478999999987543 999999999999999999999999999999999999999999998652 2355554
Q ss_pred ccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCC
Q 006275 497 QAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (652)
Q Consensus 497 ~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEP 570 (652)
..+++..|+.+|+...... ....++.++++.+++. +..++++.+||||||||++|||||+.+|++||||||
T Consensus 79 --~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~ia~al~~~p~llllDEP 155 (211)
T cd03298 79 --NNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLA-GLEKRLPGELSGGERQRVALARVLVRDKPVLLLDEP 155 (211)
T ss_pred --cccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCH-HHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3456678999999754321 1234578899999995 567899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEe
Q 006275 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (652)
Q Consensus 571 t~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~ 620 (652)
|++||+.++..+.+.|+++ +.|||+||||++++..+|||+++|++|++..
T Consensus 156 ~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~ 209 (211)
T cd03298 156 FAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAA 209 (211)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEee
Confidence 9999999999999999754 4699999999999999999999999999863
No 339
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-39 Score=338.80 Aligned_cols=211 Identities=21% Similarity=0.274 Sum_probs=170.0
Q ss_pred CCCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC-----CCCcEEEECCCC--------
Q 006275 94 ISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN-------- 160 (652)
Q Consensus 94 ~~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~i~~~~~~-------- 160 (652)
..+.|+++|++++|++.++|+|+||+|++|++++|+|+||||||||+++|+|+.+ |++|+|.++|..
T Consensus 36 ~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~ 115 (286)
T PRK14275 36 GKPHVVAKNFSIYYGEFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDE 115 (286)
T ss_pred CceEEEEeeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccch
Confidence 3457999999999988889999999999999999999999999999999999864 499999998632
Q ss_pred ----ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHH
Q 006275 161 ----MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLD 236 (652)
Q Consensus 161 ----~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (652)
..++|++|++.++. .||.||+...... ... .+.....
T Consensus 116 ~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~---------------~~~-----------------------~~~~~~~ 156 (286)
T PRK14275 116 VLLRKKIGMVFQKPNPFP-KSIFDNIAYGPRL---------------HGI-----------------------NDKKQLE 156 (286)
T ss_pred HHhhhcEEEECCCCCCCc-cCHHHHHHhHHHh---------------cCC-----------------------CcHHHHH
Confidence 25999999987765 5999998532100 000 0000112
Q ss_pred HHHHHHhhhcCCC---cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEE
Q 006275 237 AKVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVI 311 (652)
Q Consensus 237 ~~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIi 311 (652)
..+.++++.+|+. .+..++.+.+|||||||||+|||||+.+|++|||||||+|||+.+++.+.++|++ .++|||+
T Consensus 157 ~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIi 236 (286)
T PRK14275 157 EIVEKSLRKAALWDEVSDRLDKNALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMI 236 (286)
T ss_pred HHHHHHHHHhCCccchhhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEE
Confidence 3344555566653 1345778999999999999999999999999999999999999999999988753 3579999
Q ss_pred EecCHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 312 ISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 312 vsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
+|||++++..+||++++|++|++. ..|...++
T Consensus 237 vsH~~~~~~~~~d~i~~L~~G~i~-~~g~~~~~ 268 (286)
T PRK14275 237 VTHNMQQASRVSDYTMFFYEGVLV-EHAPTAQL 268 (286)
T ss_pred EeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 999999999999999999999984 66765554
No 340
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=9.1e-40 Score=328.80 Aligned_cols=197 Identities=26% Similarity=0.404 Sum_probs=166.8
Q ss_pred eEEEeEEEEeCC----eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-------------
Q 006275 98 VKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------- 160 (652)
Q Consensus 98 i~v~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------------- 160 (652)
|+++|+++.|++ +.+|+++||++++|++++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 789999999975 569999999999999999999999999999999999999999999998743
Q ss_pred ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHH
Q 006275 161 MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVS 240 (652)
Q Consensus 161 ~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 240 (652)
..++|++|++.+++..|+.+|+...... .. ....+.....+.
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~--------------~~------------------------~~~~~~~~~~~~ 123 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALEL--------------QP------------------------NLSYQEARERAR 123 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHh--------------cc------------------------CCCHHHHHHHHH
Confidence 2599999999887778999998532100 00 001112334567
Q ss_pred HHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCH
Q 006275 241 KLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDR 316 (652)
Q Consensus 241 ~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~ 316 (652)
++++.+|+. +..++.+.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|++ .++|||++||++
T Consensus 124 ~~l~~~~l~-~~~~~~~~~lS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~ 202 (220)
T TIGR02982 124 AMLEAVGLG-DHLDYYPHNLSGGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDN 202 (220)
T ss_pred HHHHHcCCh-hhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 788999985 567888999999999999999999999999999999999999999998887742 489999999999
Q ss_pred HHHHhhcCeEEEEcCCeE
Q 006275 317 AFLDQLCTKIVETEMGVS 334 (652)
Q Consensus 317 ~~l~~~~d~ii~l~~G~~ 334 (652)
+.. ++||+|++|++|++
T Consensus 203 ~~~-~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 203 RIL-DVADRIVHMEDGKL 219 (220)
T ss_pred HHH-hhCCEEEEEECCEE
Confidence 965 79999999999864
No 341
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=338.94 Aligned_cols=204 Identities=27% Similarity=0.399 Sum_probs=174.2
Q ss_pred EEEEEeeeeEeC-CeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc------------c
Q 006275 424 VVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------P 490 (652)
Q Consensus 424 ~i~~~~v~~~y~-~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------~ 490 (652)
+|+++||+++|+ .+.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 1 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 1 ILETRDLKYSYPDGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred CEEEEEEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 478999999996 467999999999999999999999999999999999999999999999998752 1
Q ss_pred ceecccccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCe
Q 006275 491 NYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (652)
Q Consensus 491 ~~~~~~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~l 564 (652)
+|++|+... ..+..|+.+|+.+.... .....+.++++.+++. +..++++.+||||||||++|||||+.+|++
T Consensus 81 ~~v~q~~~~-~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LS~Gq~qrv~laral~~~p~l 158 (275)
T PRK13639 81 GIVFQNPDD-QLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGME-GFENKPPHHLSGGQKKRVAIAGILAMKPEI 158 (275)
T ss_pred EEEeeChhh-hhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 345554321 23457999999764321 1123577899999995 678999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 565 LVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 565 LlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
|||||||++||+.++..+.++|.++ +.|||+||||++++..+||++++|++|++.. .|+++++..
T Consensus 159 lllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~ 226 (275)
T PRK13639 159 IVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIK-EGTPKEVFS 226 (275)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-eCCHHHHhc
Confidence 9999999999999999999999865 4599999999999999999999999999974 588777654
No 342
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=6.4e-40 Score=357.38 Aligned_cols=212 Identities=27% Similarity=0.420 Sum_probs=180.9
Q ss_pred CCCceEEEeEEEEeCC-----------eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC--
Q 006275 94 ISSGVKLENISKSYKG-----------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-- 160 (652)
Q Consensus 94 ~~~~i~v~~ls~~y~~-----------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-- 160 (652)
..+.++++|+++.|.. ..+++||||+|.+||++||||++|||||||.|+|+|+++|++|+|.++|.+
T Consensus 277 ~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~ 356 (539)
T COG1123 277 AEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLD 356 (539)
T ss_pred cCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccc
Confidence 4568999999999962 248999999999999999999999999999999999999999999998754
Q ss_pred ----------ceEEEEeccC--ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHH
Q 006275 161 ----------MKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQ 228 (652)
Q Consensus 161 ----------~~i~~v~Q~~--~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (652)
.++-+++|+| .+.+..||.+++...+.-. .
T Consensus 357 ~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~--------------------------------------~ 398 (539)
T COG1123 357 LTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIH--------------------------------------G 398 (539)
T ss_pred cccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhh--------------------------------------c
Confidence 3688899998 4667889999885332100 0
Q ss_pred hCChhcHHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----c
Q 006275 229 AVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----K 304 (652)
Q Consensus 229 ~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~ 304 (652)
.....+..+++.++++.+|++.+.+++++.+|||||||||+|||||+.+|++|++|||||+||+..+..+.++|+ +
T Consensus 399 ~~~~~~~~~rv~~ll~~VgL~~~~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e 478 (539)
T COG1123 399 GGSGAERRARVAELLELVGLPPEFLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEE 478 (539)
T ss_pred ccchHHHHHHHHHHHHHcCCCHHHHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHH
Confidence 001123345788999999999778999999999999999999999999999999999999999999999988874 4
Q ss_pred CCCeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 305 QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 305 ~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
.|.|.|+||||+.++..+||||++|.+|+++ ..|+.++.
T Consensus 479 ~g~t~lfISHDl~vV~~i~drv~vm~~G~iV-E~G~~~~v 517 (539)
T COG1123 479 LGLTYLFISHDLAVVRYIADRVAVMYDGRIV-EEGPTEKV 517 (539)
T ss_pred hCCEEEEEeCCHHHHHhhCceEEEEECCeEE-EeCCHHHH
Confidence 6999999999999999999999999999984 66765443
No 343
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-39 Score=333.81 Aligned_cols=205 Identities=24% Similarity=0.354 Sum_probs=172.9
Q ss_pred CcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCC-----CeeEEEECceecc-------
Q 006275 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL------- 489 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~------- 489 (652)
.++|+++|++++|+++.+|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 5 ~~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 5 EAIIETENLNLFYTDFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred CceEEEeeeEEEeCCceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 4479999999999888899999999999999999999999999999999999987 4899999997652
Q ss_pred -----cceecccccccCCCCCCHHHHHHHhhhh---c----cHHHHHHHHhhCCCC---hhhhccCcCCCCHHHHHHHHH
Q 006275 490 -----PNYFEQNQAEALDLDKTVLETVAEAAED---W----RIDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAF 554 (652)
Q Consensus 490 -----~~~~~~~~~~~~~~~~tv~e~~~~~~~~---~----~~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqrqrv~L 554 (652)
.+|++|. ..++ ..|+.+|+.+.... . ..+.+.++++.+++. .+..++++.+||||||||++|
T Consensus 85 ~~~~~i~~v~q~--~~~~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgG~~qrv~l 161 (254)
T PRK14273 85 ELRRKIGMVFQT--PNPF-LMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNTNALSLSGGQQQRLCI 161 (254)
T ss_pred HHhhceEEEeec--cccc-cCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhCCcccCCHHHHHHHHH
Confidence 1244443 2333 58999999764321 1 123467778888863 245688999999999999999
Q ss_pred HHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||||+.+|++|||||||++||+.++..+.++|+++. .|||+||||++++.++|||+++|++|++.. .|+.++..+
T Consensus 162 aral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~ 238 (254)
T PRK14273 162 ARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEE-ESSTDELFF 238 (254)
T ss_pred HHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHHh
Confidence 999999999999999999999999999999998763 599999999999999999999999999974 577777653
No 344
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=9.7e-40 Score=338.27 Aligned_cols=211 Identities=25% Similarity=0.427 Sum_probs=175.8
Q ss_pred EEEEEeeeeEeC---------CeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-----
Q 006275 424 VVTIKNLEFGYE---------DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~---------~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----- 489 (652)
+|+++||++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 689999999997 478999999999999999999999999999999999999999999999997652
Q ss_pred --------cceecccccccCCCCCCHHHHHHHhhh-------hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHH
Q 006275 490 --------PNYFEQNQAEALDLDKTVLETVAEAAE-------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAF 554 (652)
Q Consensus 490 --------~~~~~~~~~~~~~~~~tv~e~~~~~~~-------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~L 554 (652)
.+|++|+....+.+..++.+++..... ......+.++++.+++.....++++.+||||||||++|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~Ge~qrl~l 162 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDSVLDKRPPQLSGGQLQRVCL 162 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChhHhhCCCccCChHHHHHHHH
Confidence 234455432235567899998754321 11123578899999996456789999999999999999
Q ss_pred HHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||||+.+|+||||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|++. ..|+.++...
T Consensus 163 aral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~-~~g~~~~~~~ 241 (268)
T PRK10419 163 ARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIV-ETQPVGDKLT 241 (268)
T ss_pred HHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEe-eeCChhhccC
Confidence 99999999999999999999999999999988754 469999999999999999999999999997 4576666544
Q ss_pred hcCCc
Q 006275 631 SFSPF 635 (652)
Q Consensus 631 ~~~~~ 635 (652)
..+++
T Consensus 242 ~~~~~ 246 (268)
T PRK10419 242 FSSPA 246 (268)
T ss_pred CCCHH
Confidence 33333
No 345
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=338.35 Aligned_cols=210 Identities=20% Similarity=0.291 Sum_probs=167.3
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC-----CCCcEEEECCCC---------
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN--------- 160 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~i~~~~~~--------- 160 (652)
.++|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 22 ~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 101 (271)
T PRK14238 22 KVVFDTQNLNLWYGEDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSVE 101 (271)
T ss_pred ceEEEEeeeEEEECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccHH
Confidence 347999999999988889999999999999999999999999999999999987 699999998742
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHH
Q 006275 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (652)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (652)
..++|++|++.++. .|++||+....... . . . +....+.
T Consensus 102 ~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~-~-----------~----~----------------------~~~~~~~ 142 (271)
T PRK14238 102 ELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIH-G-----------I----K----------------------DKKTLDE 142 (271)
T ss_pred HHhhhEEEEecCCcccc-ccHHHHHHHHHHhc-C-----------C----C----------------------cHHHHHH
Confidence 25999999987755 59999985321100 0 0 0 0000111
Q ss_pred HHHHHhhhcCCC---cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 006275 238 KVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (652)
Q Consensus 238 ~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIiv 312 (652)
.+.++++.+++. .+..++++.+||||||||++|||||+.+|++|||||||+|||+.++.++.++|++ .++|||++
T Consensus 143 ~~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiv 222 (271)
T PRK14238 143 IVEKSLRGAAIWDELKDRLHDNAYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIV 222 (271)
T ss_pred HHHHHHHHcCCcchHHHHHhcCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEE
Confidence 222333333221 1345678899999999999999999999999999999999999999999988753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 313 sHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
|||++++..+||++++|++|++. ..|+.+++
T Consensus 223 sH~~~~i~~~~d~i~~l~~G~i~-~~g~~~~~ 253 (271)
T PRK14238 223 THNMQQAARISDKTAFFLNGYVN-EYDDTDKI 253 (271)
T ss_pred EcCHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 99999999999999999999984 55776654
No 346
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-40 Score=339.55 Aligned_cols=211 Identities=24% Similarity=0.301 Sum_probs=172.9
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCC--------CcEEEECCCCc-------
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD--------SGNVIKAKSNM------- 161 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~--------~G~i~~~~~~~------- 161 (652)
+|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|...
T Consensus 1 ml~~~nl~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (272)
T PRK13547 1 MLTADHLHVARRHRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPR 80 (272)
T ss_pred CeEEEEEEEEECCEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHH
Confidence 378999999999889999999999999999999999999999999999999998 99999987431
Q ss_pred ---eEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 162 ---KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 162 ---~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
.++|++|++..++..|++||+......... .. ... .......
T Consensus 81 ~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~-------------~~---------------------~~~-~~~~~~~ 125 (272)
T PRK13547 81 LARLRAVLPQAAQPAFAFSAREIVLLGRYPHAR-------------RA---------------------GAL-THRDGEI 125 (272)
T ss_pred HHhhcEEecccCCCCCCCcHHHHHhhccccccc-------------cc---------------------ccC-CHHHHHH
Confidence 389999998666678999998532100000 00 000 0112234
Q ss_pred HHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHc---------cCCCeEEEeCCCCCCCHHHHHHHHHHHcc----C
Q 006275 239 VSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILL---------QDPDLLLLDEPTNHLDLDTIEWLEGYLGK----Q 305 (652)
Q Consensus 239 i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~---------~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~ 305 (652)
+.++++.+|+. ...++++.+|||||||||+|||||+ .+|++|||||||++||+.+++++.++|++ .
T Consensus 126 ~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~ 204 (272)
T PRK13547 126 AWQALALAGAT-ALVGRDVTTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDW 204 (272)
T ss_pred HHHHHHHcCcH-hhhcCCcccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhc
Confidence 56778888986 4678889999999999999999999 59999999999999999999999888753 3
Q ss_pred CCeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 306 DVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 306 g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
+.|||+||||++++.++||++++|++|++. +.|+.+++
T Consensus 205 ~~tviiisH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 242 (272)
T PRK13547 205 NLGVLAIVHDPNLAARHADRIAMLADGAIV-AHGAPADV 242 (272)
T ss_pred CCEEEEEECCHHHHHHhCCEEEEEECCeEE-EecCHHHH
Confidence 899999999999999999999999999974 55665443
No 347
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.5e-40 Score=304.54 Aligned_cols=198 Identities=27% Similarity=0.442 Sum_probs=170.4
Q ss_pred ceEEEeEEEEeCC----eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC------------
Q 006275 97 GVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------ 160 (652)
Q Consensus 97 ~i~v~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------------ 160 (652)
.|+++++++..+. ..||++|+|.|++||.+|||||+||||||||-+++|+..|++|+|.+.|..
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 6899999999864 359999999999999999999999999999999999999999999998753
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
.++|+|+|.+.+.+++|..||++.... +... ........
T Consensus 86 R~~~vGfVFQSF~Lip~ltAlENV~lPle---------------L~ge------------------------~~~~~~~~ 126 (228)
T COG4181 86 RARHVGFVFQSFHLIPNLTALENVALPLE---------------LRGE------------------------SSADSRAG 126 (228)
T ss_pred hccceeEEEEeeeccccchhhhhccchhh---------------hcCC------------------------ccccHHHH
Confidence 369999999999999999999863210 0000 01122345
Q ss_pred HHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHH----ccCCCeEEEEec
Q 006275 239 VSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISH 314 (652)
Q Consensus 239 i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L----~~~g~tvIivsH 314 (652)
.+++|+.+|+. ..++.++.+|||||+|||+||||++..|+||+.||||-+||.++-+.+.++| ++.|.|.|+|||
T Consensus 127 A~~lL~~vGLg-~Rl~HyP~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTH 205 (228)
T COG4181 127 AKALLEAVGLG-KRLTHYPAQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTH 205 (228)
T ss_pred HHHHHHHhCcc-cccccCccccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeC
Confidence 67889999997 5678889999999999999999999999999999999999999999888876 567999999999
Q ss_pred CHHHHHhhcCeEEEEcCCeEE
Q 006275 315 DRAFLDQLCTKIVETEMGVSR 335 (652)
Q Consensus 315 d~~~l~~~~d~ii~l~~G~~~ 335 (652)
|+..+.+ |+|++-|.+|++.
T Consensus 206 D~~LA~R-c~R~~r~~~G~l~ 225 (228)
T COG4181 206 DPQLAAR-CDRQLRLRSGRLV 225 (228)
T ss_pred CHHHHHh-hhheeeeecceec
Confidence 9999965 9999999999874
No 348
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=339.32 Aligned_cols=207 Identities=24% Similarity=0.330 Sum_probs=172.7
Q ss_pred ceEEEeEEEEeCC---eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceE
Q 006275 97 GVKLENISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKI 163 (652)
Q Consensus 97 ~i~v~~ls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i 163 (652)
+|+++|++++|++ .++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ ..+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 5899999999974 249999999999999999999999999999999999999999999998743 249
Q ss_pred EEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHH
Q 006275 164 AFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (652)
Q Consensus 164 ~~v~Q~~~-~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (652)
+|++|++. .++..||.+|+....... ........+++.++
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~---------------------------------------~~~~~~~~~~~~~~ 124 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQ---------------------------------------GIPREEMIKRVDEA 124 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHc---------------------------------------CCCHHHHHHHHHHH
Confidence 99999974 456789999985321100 00111223455677
Q ss_pred hhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---c-CCCeEEEEecCHHH
Q 006275 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---K-QDVPMVIISHDRAF 318 (652)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~-~g~tvIivsHd~~~ 318 (652)
++.+|+. ...++++.+||||||||++|||||+.+|++|||||||++||+.++..+.++|+ + .|.|||++||++++
T Consensus 125 l~~~~l~-~~~~~~~~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~ 203 (277)
T PRK13642 125 LLAVNML-DFKTREPARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE 203 (277)
T ss_pred HHHCCCH-hHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH
Confidence 8888885 56788899999999999999999999999999999999999999999988874 2 48999999999999
Q ss_pred HHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 319 LDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 319 l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
+. .||+|++|++|++. ..|+.+++.
T Consensus 204 ~~-~~d~i~~l~~G~i~-~~g~~~~~~ 228 (277)
T PRK13642 204 AA-SSDRILVMKAGEII-KEAAPSELF 228 (277)
T ss_pred HH-hCCEEEEEECCEEE-EeCCHHHHh
Confidence 96 69999999999974 667766654
No 349
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-39 Score=334.79 Aligned_cols=205 Identities=22% Similarity=0.326 Sum_probs=172.8
Q ss_pred CcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCC-----CeeEEEECceecc-------
Q 006275 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL------- 489 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~------- 489 (652)
.++|+++|+++.|+++.+|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 10 ~~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 89 (258)
T PRK14268 10 QPQIKVENLNLWYGEKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVV 89 (258)
T ss_pred ceeEEEeeeEEEeCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHH
Confidence 4479999999999988899999999999999999999999999999999999975 7999999997652
Q ss_pred -----cceecccccccCCCCCCHHHHHHHhhhh--cc----HHHHHHHHhhCCCC---hhhhccCcCCCCHHHHHHHHHH
Q 006275 490 -----PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFC 555 (652)
Q Consensus 490 -----~~~~~~~~~~~~~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqrqrv~LA 555 (652)
.+|++|. ..+++ .|+.+|+.+.... .. ...+.++++.+++. ....++++.+|||||||||+||
T Consensus 90 ~~~~~i~~v~q~--~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~la 166 (258)
T PRK14268 90 ELRKNVGMVFQK--PNPFP-MSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETSDRLKSPALSLSGGQQQRLCIA 166 (258)
T ss_pred HHhhhEEEEecC--CccCc-ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchhhhhcCChhhCCHHHHHHHHHH
Confidence 1234443 23444 8999999864321 11 22467788888873 2456889999999999999999
Q ss_pred HHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
|||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++.++|||+++|++|++. ..|.++++.+
T Consensus 167 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 242 (258)
T PRK14268 167 RTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELI-EFGQTRQIFH 242 (258)
T ss_pred HHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEE-EeCCHHHHhc
Confidence 9999999999999999999999999999999875 369999999999999999999999999997 4577777654
No 350
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=6.3e-41 Score=317.20 Aligned_cols=206 Identities=24% Similarity=0.404 Sum_probs=183.1
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-----------cc
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PN 491 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~ 491 (652)
+.+.++|+.++|+.++++++|||+|++||++|++|||||||||.+.+++|+++|++|+|.+++.++. .+
T Consensus 3 ~~L~a~~l~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlGig 82 (243)
T COG1137 3 STLVAENLAKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLGIG 82 (243)
T ss_pred cEEEehhhhHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcCcc
Confidence 3589999999999999999999999999999999999999999999999999999999999999874 24
Q ss_pred eecccccccCCCCCCHHHHHHHhhhhc--------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCC
Q 006275 492 YFEQNQAEALDLDKTVLETVAEAAEDW--------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (652)
Q Consensus 492 ~~~~~~~~~~~~~~tv~e~~~~~~~~~--------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~ 563 (652)
|.+|. ...+..+||.+|+....+.. +..++.++|+.|++ .+..+++..+||||||+|+.|||||+.+|+
T Consensus 83 YLpQE--~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i-~hlr~~~a~sLSGGERRR~EIARaLa~~P~ 159 (243)
T COG1137 83 YLPQE--ASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHI-THLRDSKAYSLSGGERRRVEIARALAANPK 159 (243)
T ss_pred ccccc--chHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhch-HHHhcCcccccccchHHHHHHHHHHhcCCC
Confidence 66654 46778899999998764321 12246689999999 578899999999999999999999999999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhhc
Q 006275 564 LLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTSF 632 (652)
Q Consensus 564 lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~~ 632 (652)
++|||||++|+||-+...+++++..+ +..|++.-|+..+...+|||.++|..|++. ..|+++++.+..
T Consensus 160 fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vl-a~G~p~ei~~n~ 230 (243)
T COG1137 160 FILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVL-AEGSPEEIVNNE 230 (243)
T ss_pred EEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEE-ecCCHHHHhcCh
Confidence 99999999999999999999988765 459999999999999999999999999997 579999887653
No 351
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.3e-40 Score=365.44 Aligned_cols=207 Identities=25% Similarity=0.439 Sum_probs=172.9
Q ss_pred CCcEEEEEeeeeEeCCe---eeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---c----
Q 006275 421 GRSVVTIKNLEFGYEDR---LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---P---- 490 (652)
Q Consensus 421 ~~~~i~~~~v~~~y~~~---~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---~---- 490 (652)
-++.|+++||+|.|+.+ +||+|+||+|+|||++|||||||+||||+.++|.++++|++|+|.+||.++. +
T Consensus 462 ~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~~~~~lr 541 (716)
T KOG0058|consen 462 LQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISDINHKYLR 541 (716)
T ss_pred ccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhcCHHHHH
Confidence 45679999999999865 6999999999999999999999999999999999999999999999999873 2
Q ss_pred ---ceecccccccCCCCCCHHHHHHHhhhhccHHHHHHHHhhCCCC-------h---hhhccCcCCCCHHHHHHHHHHHH
Q 006275 491 ---NYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFK-------A---DMLDRKVSLLSGGEKARLAFCKF 557 (652)
Q Consensus 491 ---~~~~~~~~~~~~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~-------~---~~~~~~~~~LSgGqrqrv~LAra 557 (652)
+++.|. +..++.|+.|||.++......+++..+.+..+-. . .....+..+||||||||+|||||
T Consensus 542 ~~Ig~V~QE---PvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAIARA 618 (716)
T KOG0058|consen 542 RKIGLVGQE---PVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIAIARA 618 (716)
T ss_pred HHeeeeecc---ceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHHHHHHHH
Confidence 233332 3457899999999987765555555444433221 1 12234456999999999999999
Q ss_pred HccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhhc
Q 006275 558 MVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTSF 632 (652)
Q Consensus 558 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~~ 632 (652)
|+++|.||||||+||+||.+++..++++|.+. +.|||+|+|++.+|++ +|+|+++++|++++ .|+.++.++..
T Consensus 619 Llr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~-Ad~Ivvi~~G~V~E-~G~h~eLl~~~ 693 (716)
T KOG0058|consen 619 LLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRH-ADQIVVIDKGRVVE-MGTHDELLSKP 693 (716)
T ss_pred HhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhh-ccEEEEEcCCeEEe-cccHHHHhhCc
Confidence 99999999999999999999999999999865 4699999999999987 99999999999985 58777766554
No 352
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-40 Score=309.70 Aligned_cols=211 Identities=25% Similarity=0.429 Sum_probs=182.3
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------------
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--------------- 160 (652)
+.++++|+.++||...+|++|||+-.+|+++.|||.+||||||+|+||.=+..|+.|.|.++|..
T Consensus 5 ~~l~v~dlHK~~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~ad 84 (256)
T COG4598 5 NALEVEDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPAD 84 (256)
T ss_pred cceehhHHHhhcccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeCC
Confidence 45999999999999999999999999999999999999999999999999999999999998632
Q ss_pred --------ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCCh
Q 006275 161 --------MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNL 232 (652)
Q Consensus 161 --------~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (652)
.+.|+|+|+++++..+||.||++.+--. + + .+..
T Consensus 85 ~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvh---V----------L-------------------------g~~k 126 (256)
T COG4598 85 KRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVH---V----------L-------------------------GVSK 126 (256)
T ss_pred HHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchH---h----------h-------------------------cCCH
Confidence 2489999999999999999998643211 0 0 0222
Q ss_pred hcHHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHH---ccCCCeE
Q 006275 233 DTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL---GKQDVPM 309 (652)
Q Consensus 233 ~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L---~~~g~tv 309 (652)
.+..++...+|.++|+. +..+.++..|||||+||++|||||+.+|+++|+|||||+|||+-..++.+.+ .+.|+|+
T Consensus 127 ~ea~e~Ae~~L~kVGi~-ek~~~YP~~LSGGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTM 205 (256)
T COG4598 127 AEAIERAEKYLAKVGIA-EKADAYPAHLSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTM 205 (256)
T ss_pred HHHHHHHHHHHHHhCch-hhhhcCccccCchHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeE
Confidence 33445667889999997 5677899999999999999999999999999999999999999988877654 5679999
Q ss_pred EEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHHH
Q 006275 310 VIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVL 346 (652)
Q Consensus 310 IivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~~ 346 (652)
++|||.+.|+.+++++|++|++|.+ ..+|++.+...
T Consensus 206 v~VTHEM~FAR~Vss~v~fLh~G~i-EE~G~P~qvf~ 241 (256)
T COG4598 206 VVVTHEMGFARDVSSHVIFLHQGKI-EEEGPPEQVFG 241 (256)
T ss_pred EEEeeehhHHHhhhhheEEeeccee-cccCChHHHhc
Confidence 9999999999999999999999987 57888777654
No 353
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.4e-39 Score=334.93 Aligned_cols=201 Identities=30% Similarity=0.460 Sum_probs=173.9
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------cceec
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYFE 494 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~~~ 494 (652)
|+++|+++.|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++
T Consensus 2 l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~ 81 (256)
T TIGR03873 2 LRLSRVSWSAGGRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVALVE 81 (256)
T ss_pred ceEEeEEEEECCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEEec
Confidence 68999999999889999999999999999999999999999999999999999999999997652 23455
Q ss_pred ccccccCCCCCCHHHHHHHhhh--------h--ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCe
Q 006275 495 QNQAEALDLDKTVLETVAEAAE--------D--WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (652)
Q Consensus 495 ~~~~~~~~~~~tv~e~~~~~~~--------~--~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~l 564 (652)
|+. .+.+..|+.+|+..... . .....+.++++.+++ .+..++++.+||||||||++|||||+.+|++
T Consensus 82 q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-~~~~~~~~~~LS~G~~qrl~la~al~~~p~l 158 (256)
T TIGR03873 82 QDS--DTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTEL-SHLADRDMSTLSGGERQRVHVARALAQEPKL 158 (256)
T ss_pred ccC--ccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCc-HhhhcCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 442 34567899999976321 0 112357788999999 4678999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 565 LVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 565 LlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
|||||||++||+.++..+.++|+++ +.|||++|||++++..+||+|++|++|++. ..|+.+++.
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 225 (256)
T TIGR03873 159 LLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVV-AAGPPREVL 225 (256)
T ss_pred EEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEE-EecCHHHhh
Confidence 9999999999999999999999876 469999999999999999999999999987 457776653
No 354
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-39 Score=333.03 Aligned_cols=205 Identities=25% Similarity=0.323 Sum_probs=173.6
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCC-----CeeEEEECceecc--------
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL-------- 489 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~-------- 489 (652)
.+|+++|++++|+++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 3 ~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 82 (253)
T PRK14267 3 FAIETVNLRVYYGSNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIE 82 (253)
T ss_pred ceEEEEeEEEEeCCeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHH
Confidence 369999999999888899999999999999999999999999999999999987 4999999998753
Q ss_pred ----cceecccccccCCCCCCHHHHHHHhhh--h------ccHHHHHHHHhhCCCCh---hhhccCcCCCCHHHHHHHHH
Q 006275 490 ----PNYFEQNQAEALDLDKTVLETVAEAAE--D------WRIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAF 554 (652)
Q Consensus 490 ----~~~~~~~~~~~~~~~~tv~e~~~~~~~--~------~~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqrqrv~L 554 (652)
.+|++|+ ..+++..|+.+|+..... . .....+.++++.+++.. ...++++.+||||||||++|
T Consensus 83 ~~~~i~~~~q~--~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~l 160 (253)
T PRK14267 83 VRREVGMVFQY--PNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKDRLNDYPSNLSGGQRQRLVI 160 (253)
T ss_pred HhhceeEEecC--CccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhhhhccChhhCCHHHHHHHHH
Confidence 1234443 345667899999976431 1 01134667888888742 34688999999999999999
Q ss_pred HHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|++.. .|++++..+
T Consensus 161 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~~ 237 (253)
T PRK14267 161 ARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIE-VGPTRKVFE 237 (253)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEE-eCCHHHHHh
Confidence 99999999999999999999999999999999875 3699999999999999999999999999974 577777654
No 355
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2.1e-39 Score=333.20 Aligned_cols=206 Identities=20% Similarity=0.286 Sum_probs=169.6
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCC----CCcEEEECCCC--------ceEE
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP----DSGNVIKAKSN--------MKIA 164 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p----~~G~i~~~~~~--------~~i~ 164 (652)
.|+++|++++| ++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.+ ..|+
T Consensus 4 ~l~~~~l~~~~-~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~ 82 (254)
T PRK10418 4 QIELRNIALQA-AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIA 82 (254)
T ss_pred EEEEeCeEEEe-ccceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEE
Confidence 58999999999 66799999999999999999999999999999999999999 99999998753 3599
Q ss_pred EEeccCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHH
Q 006275 165 FLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (652)
Q Consensus 165 ~v~Q~~~--~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (652)
|++|++. +.+..|+.+++...... ......+.++.++
T Consensus 83 ~v~q~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~ 121 (254)
T PRK10418 83 TIMQNPRSAFNPLHTMHTHARETCLA-----------------------------------------LGKPADDATLTAA 121 (254)
T ss_pred EEecCCccccCccccHHHHHHHHHHH-----------------------------------------cCCChHHHHHHHH
Confidence 9999974 22345777775321000 0000012345677
Q ss_pred hhhcCCCcc--cccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCH
Q 006275 243 MPELGFTAD--DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDR 316 (652)
Q Consensus 243 l~~lgl~~~--~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~ 316 (652)
++.+|+... ..++.+.+|||||||||+|||||+.+|++|||||||+|||+.+++.+.++|++ .|.|||++||++
T Consensus 122 l~~~~l~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~ 201 (254)
T PRK10418 122 LEAVGLENAARVLKLYPFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDM 201 (254)
T ss_pred HHHcCCCChhhhhhcCCcccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCH
Confidence 888888632 46788999999999999999999999999999999999999999999887743 478999999999
Q ss_pred HHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 317 AFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 317 ~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
+++..+||+++++++|++ ...|+.+++.
T Consensus 202 ~~~~~~~d~v~~l~~G~i-~~~~~~~~~~ 229 (254)
T PRK10418 202 GVVARLADDVAVMSHGRI-VEQGDVETLF 229 (254)
T ss_pred HHHHHhCCEEEEEECCEE-EEecCHHHHh
Confidence 999999999999999997 4667766553
No 356
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=8.5e-40 Score=332.52 Aligned_cols=191 Identities=28% Similarity=0.446 Sum_probs=159.1
Q ss_pred EEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------ceEEEEe-ccCccCC
Q 006275 105 KSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLS-QEFEVSM 174 (652)
Q Consensus 105 ~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------~~i~~v~-Q~~~~~~ 174 (652)
+.|+.+++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|++ |.+.+++
T Consensus 29 ~~~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 29 RKYREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred cccCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 55667789999999999999999999999999999999999999999999998742 2599997 5566667
Q ss_pred CCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCccccc
Q 006275 175 SRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGD 254 (652)
Q Consensus 175 ~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~ 254 (652)
..|++||+..... +. .........++.++++.+|+. +..+
T Consensus 109 ~~tv~e~l~~~~~---------------~~------------------------~~~~~~~~~~~~~~l~~~gl~-~~~~ 148 (236)
T cd03267 109 DLPVIDSFYLLAA---------------IY------------------------DLPPARFKKRLDELSELLDLE-ELLD 148 (236)
T ss_pred CCcHHHHHHHHHH---------------Hc------------------------CCCHHHHHHHHHHHHHHcCCh-hHhc
Confidence 8899999742100 00 000111233455677888886 5678
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCeEEEEc
Q 006275 255 RLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTKIVETE 330 (652)
Q Consensus 255 ~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~ii~l~ 330 (652)
+++.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|++ .++|||+|||+++++..+||++++|.
T Consensus 149 ~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~ 228 (236)
T cd03267 149 TPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVID 228 (236)
T ss_pred CChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEe
Confidence 88999999999999999999999999999999999999999999988753 37899999999999999999999999
Q ss_pred CCeEE
Q 006275 331 MGVSR 335 (652)
Q Consensus 331 ~G~~~ 335 (652)
+|++.
T Consensus 229 ~G~i~ 233 (236)
T cd03267 229 KGRLL 233 (236)
T ss_pred CCEEE
Confidence 99874
No 357
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-39 Score=331.85 Aligned_cols=204 Identities=25% Similarity=0.337 Sum_probs=174.3
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCC-----CeeEEEECceecc---------
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL--------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~--------- 489 (652)
+|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 3 ~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 82 (250)
T PRK14247 3 KIEIRDLKVSFGQVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRR 82 (250)
T ss_pred eEEEEeeEEEECCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhc
Confidence 58999999999988899999999999999999999999999999999999974 7999999998652
Q ss_pred -cceecccccccCCCCCCHHHHHHHhhhh-------c-cHHHHHHHHhhCCCCh---hhhccCcCCCCHHHHHHHHHHHH
Q 006275 490 -PNYFEQNQAEALDLDKTVLETVAEAAED-------W-RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCKF 557 (652)
Q Consensus 490 -~~~~~~~~~~~~~~~~tv~e~~~~~~~~-------~-~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqrqrv~LAra 557 (652)
.+|++|+ ..+++..|+.+|+...... . ..+.+.++++.+++.. ...++++.+|||||||||+||||
T Consensus 83 ~i~~v~q~--~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~lara 160 (250)
T PRK14247 83 RVQMVFQI--PNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKDRLDAPAGKLSGGQQQRLCIARA 160 (250)
T ss_pred cEEEEecc--CccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhhhhcCCcccCCHHHHHHHHHHHH
Confidence 1344444 3456778999999764311 0 1234678899998842 34688999999999999999999
Q ss_pred HccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 558 MVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 558 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
|+.+|++|||||||++||+.++..+.+.|++. +.|||+||||++++..+||++++|++|++. ..|+.+++.+
T Consensus 161 l~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 234 (250)
T PRK14247 161 LAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIV-EWGPTREVFT 234 (250)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEE-EECCHHHHHc
Confidence 99999999999999999999999999999875 369999999999999999999999999997 4588877654
No 358
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.7e-39 Score=369.03 Aligned_cols=211 Identities=34% Similarity=0.537 Sum_probs=179.6
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccCc-cC
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFE-VS 173 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~~-~~ 173 (652)
.++|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++ ...+|||++|++. ++
T Consensus 320 ~~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~-~~~~i~~v~q~~~~~~ 398 (552)
T TIGR03719 320 DKVIEAENLSKGFGDKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIG-ETVKLAYVDQSRDALD 398 (552)
T ss_pred CeEEEEeeEEEEECCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEEC-CceEEEEEeCCccccC
Confidence 457999999999988889999999999999999999999999999999999999999999984 4558999999963 66
Q ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccc
Q 006275 174 MSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDG 253 (652)
Q Consensus 174 ~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~ 253 (652)
+..|+.||+....... ... ..+..+.++++.+|+.....
T Consensus 399 ~~~tv~e~l~~~~~~~---------------------------------------~~~--~~~~~~~~~l~~~~l~~~~~ 437 (552)
T TIGR03719 399 PNKTVWEEISGGLDII---------------------------------------QLG--KREVPSRAYVGRFNFKGSDQ 437 (552)
T ss_pred CCCcHHHHHHhhcccc---------------------------------------ccC--cchHHHHHHHHhCCCChhHh
Confidence 7789999985321000 000 00112345788889864457
Q ss_pred cCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcC-C
Q 006275 254 DRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEM-G 332 (652)
Q Consensus 254 ~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~ii~l~~-G 332 (652)
++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|++.+.|||+||||++++..+||+|++|++ |
T Consensus 438 ~~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~viivsHd~~~~~~~~d~i~~l~~~~ 517 (552)
T TIGR03719 438 QKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFAGCAVVISHDRWFLDRIATHILAFEGDS 517 (552)
T ss_pred cCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHhCCEEEEEECCC
Confidence 889999999999999999999999999999999999999999999999988767999999999999999999999987 5
Q ss_pred eEEEecCChHHHHHH
Q 006275 333 VSRTYEGNYSQYVLE 347 (652)
Q Consensus 333 ~~~~~~g~~~~~~~~ 347 (652)
++..+.|+|++|...
T Consensus 518 ~~~~~~g~~~~~~~~ 532 (552)
T TIGR03719 518 HVEWFEGNYSEYEED 532 (552)
T ss_pred eEEEeCCCHHHHHHH
Confidence 777789999877544
No 359
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=348.66 Aligned_cols=201 Identities=26% Similarity=0.408 Sum_probs=173.8
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------------
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------------- 489 (652)
||++ ||+++|+++.+ ++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 ~l~~-~l~k~~~~~~~--~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~~ 77 (352)
T PRK11144 1 MLEL-NFKQQLGDLCL--TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKRR 77 (352)
T ss_pred CeEE-EEEEEeCCEEE--EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhCC
Confidence 4778 99999987643 899999999999999999999999999999999999999999997652
Q ss_pred cceecccccccCCCCCCHHHHHHHhhhhccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeC
Q 006275 490 PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (652)
Q Consensus 490 ~~~~~~~~~~~~~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDE 569 (652)
.+|++|+ ..+++.+|+.+|+.+........++.++++.+++. +..++++.+|||||||||+|||||+.+|++|||||
T Consensus 78 i~~v~q~--~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGq~qRvalaraL~~~p~llLLDE 154 (352)
T PRK11144 78 IGYVFQD--ARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIE-PLLDRYPGSLSGGEKQRVAIGRALLTAPELLLMDE 154 (352)
T ss_pred EEEEcCC--cccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCc-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEcC
Confidence 1244443 45677899999998764433445688899999995 67899999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 570 PTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 570 Pt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|++.. .|++++....
T Consensus 155 Pts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~-~g~~~~i~~~ 219 (352)
T PRK11144 155 PLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKA-FGPLEEVWAS 219 (352)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEE-ecCHHHHHhC
Confidence 99999999999999988754 4699999999999999999999999999974 5777766544
No 360
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-39 Score=333.94 Aligned_cols=210 Identities=18% Similarity=0.259 Sum_probs=169.4
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCC-----CCcEEEECCCC----------
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN---------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~i~~~~~~---------- 160 (652)
..|+++|++++|+++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 6 ~~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 85 (259)
T PRK14260 6 PAIKVKDLSFYYNTSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININR 85 (259)
T ss_pred ceEEEEEEEEEECCeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHh
Confidence 359999999999888899999999999999999999999999999999999985 48999998742
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
..|+|++|++.+++ .|++||+...+... . ..+.......
T Consensus 86 ~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~---------------~-----------------------~~~~~~~~~~ 126 (259)
T PRK14260 86 LRRQIGMVFQRPNPFP-MSIYENVAYGVRIS---------------A-----------------------KLPQADLDEI 126 (259)
T ss_pred hhhheEEEecccccCC-ccHHHHHHHHHHHh---------------c-----------------------CCCHHHHHHH
Confidence 25999999988765 89999985321100 0 0000011223
Q ss_pred HHHHhhhcCCC---cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006275 239 VSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (652)
Q Consensus 239 i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (652)
+.++++.+|+. ....++.+.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .++|||++|
T Consensus 127 ~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~t 206 (259)
T PRK14260 127 VESALKGAALWQEVKDKLNKSALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVT 206 (259)
T ss_pred HHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 44555666653 1356778899999999999999999999999999999999999999999988753 368999999
Q ss_pred cCHHHHHhhcCeEEEEc-----CCeEEEecCChHHHH
Q 006275 314 HDRAFLDQLCTKIVETE-----MGVSRTYEGNYSQYV 345 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~-----~G~~~~~~g~~~~~~ 345 (652)
|+++++..+||++++|+ +|++ ...|+..++.
T Consensus 207 H~~~~i~~~~d~i~~l~~~~~~~G~i-~~~~~~~~~~ 242 (259)
T PRK14260 207 HNMQQATRVSDFTAFFSTDESRIGQM-VEFGVTTQIF 242 (259)
T ss_pred CCHHHHHHhcCeEEEEeccCCCCceE-EEeCCHHHHh
Confidence 99999999999999997 4876 4667766553
No 361
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1.7e-39 Score=332.67 Aligned_cols=213 Identities=21% Similarity=0.283 Sum_probs=168.7
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCC--CCCCcEEEECCCC-----------ceE
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQE--EPDSGNVIKAKSN-----------MKI 163 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~--~p~~G~i~~~~~~-----------~~i 163 (652)
+|+++|++++|+++++|+++||+|++|++++|+|+||||||||+++|+|++ +|++|+|.++|.+ ..+
T Consensus 1 ~i~~~nl~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (248)
T PRK09580 1 MLSIKDLHVSVEDKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEGI 80 (248)
T ss_pred CeEEEEEEEEeCCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcce
Confidence 378999999999888999999999999999999999999999999999995 6999999998743 249
Q ss_pred EEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHh
Q 006275 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (652)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (652)
+|++|++..++..|+.+++...+.. +.. .. .....+.......+.+++
T Consensus 81 ~~~~q~~~~~~~~~~~~~~~~~~~~----------~~~-~~---------------------~~~~~~~~~~~~~~~~~l 128 (248)
T PRK09580 81 FMAFQYPVEIPGVSNQFFLQTALNA----------VRS-YR---------------------GQEPLDRFDFQDLMEEKI 128 (248)
T ss_pred EEEecCchhccchhHHHHHHHhhhh----------hhc-cc---------------------ccccchHHHHHHHHHHHH
Confidence 9999998766655655443211100 000 00 000011122344566778
Q ss_pred hhcCCCcccccCCCC-CCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHH
Q 006275 244 PELGFTADDGDRLVA-SFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFL 319 (652)
Q Consensus 244 ~~lgl~~~~~~~~~~-~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l 319 (652)
+.++++....++++. +|||||||||+|||||+.+|++|||||||+|||+.+++++.++|+ +.++|||++|||++++
T Consensus 129 ~~~~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~ 208 (248)
T PRK09580 129 ALLKMPEDLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRIL 208 (248)
T ss_pred HHcCCChhhcccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHH
Confidence 888886455667675 899999999999999999999999999999999999999988663 4588999999999999
Q ss_pred Hhh-cCeEEEEcCCeEEEecCChH
Q 006275 320 DQL-CTKIVETEMGVSRTYEGNYS 342 (652)
Q Consensus 320 ~~~-~d~ii~l~~G~~~~~~g~~~ 342 (652)
..+ ||+|+++++|++. +.|+++
T Consensus 209 ~~~~~d~i~~l~~g~i~-~~g~~~ 231 (248)
T PRK09580 209 DYIKPDYVHVLYQGRIV-KSGDFT 231 (248)
T ss_pred HhhhCCEEEEEECCeEE-EeCCHH
Confidence 887 8999999999984 667765
No 362
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-39 Score=334.28 Aligned_cols=212 Identities=17% Similarity=0.286 Sum_probs=172.9
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECC------C---------
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAK------S--------- 159 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~------~--------- 159 (652)
.+.|+++|++++|+++.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 8 ~~~i~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~ 87 (257)
T PRK14246 8 EDVFNISRLYLYINDKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIK 87 (257)
T ss_pred hhheeeeeEEEecCCceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHH
Confidence 4579999999999999999999999999999999999999999999999999999997766554 2
Q ss_pred -CceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 160 -NMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 160 -~~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
...++|++|++.+++..|+.+|+....... . .....+...+
T Consensus 88 ~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~---------------~-----------------------~~~~~~~~~~ 129 (257)
T PRK14246 88 LRKEVGMVFQQPNPFPHLSIYDNIAYPLKSH---------------G-----------------------IKEKREIKKI 129 (257)
T ss_pred HhcceEEEccCCccCCCCcHHHHHHHHHHhc---------------C-----------------------CCCHHHHHHH
Confidence 135999999998877889999985321000 0 0000112234
Q ss_pred HHHHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006275 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (652)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (652)
+.++++.+|+.. +..++.+..||||||||++|||||+.+|++|||||||+|||+.++.++.++|++ .+.|||+||
T Consensus 130 ~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvs 209 (257)
T PRK14246 130 VEECLRKVGLWKEVYDRLNSPASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVS 209 (257)
T ss_pred HHHHHHHcCCCccchhhhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEE
Confidence 556677777742 345778899999999999999999999999999999999999999999988753 368999999
Q ss_pred cCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
|+++++..+||+++++++|++. ..|+.+++.
T Consensus 210 h~~~~~~~~~d~v~~l~~g~i~-~~g~~~~~~ 240 (257)
T PRK14246 210 HNPQQVARVADYVAFLYNGELV-EWGSSNEIF 240 (257)
T ss_pred CCHHHHHHhCCEEEEEECCEEE-EECCHHHHH
Confidence 9999999999999999999885 556655543
No 363
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=7.2e-40 Score=324.96 Aligned_cols=186 Identities=25% Similarity=0.402 Sum_probs=161.9
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------ceEEEEec
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLSQ 168 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------~~i~~v~Q 168 (652)
|+++|+++.|+++.+|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|++|
T Consensus 1 l~i~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 80 (201)
T cd03231 1 LEADELTCERDGRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQRDSIARGLLYLGH 80 (201)
T ss_pred CEEEEEEEEeCCceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccccHHhhhheEEecc
Confidence 478999999998889999999999999999999999999999999999999999999998743 25999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCC
Q 006275 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (652)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (652)
++.+++..|++||+...... ..++++.++++.+|+
T Consensus 81 ~~~~~~~~tv~e~l~~~~~~---------------------------------------------~~~~~~~~~l~~~~l 115 (201)
T cd03231 81 APGIKTTLSVLENLRFWHAD---------------------------------------------HSDEQVEEALARVGL 115 (201)
T ss_pred ccccCCCcCHHHHHHhhccc---------------------------------------------ccHHHHHHHHHHcCC
Confidence 98887788999997521000 012345567778888
Q ss_pred CcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCe
Q 006275 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTK 325 (652)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~d~ 325 (652)
. +..++++.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|+ +.|+|+|++||+...+..+|++
T Consensus 116 ~-~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~ 194 (201)
T cd03231 116 N-GFEDRPVAQLSAGQQRRVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGAR 194 (201)
T ss_pred h-hhhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccce
Confidence 6 45688899999999999999999999999999999999999999999998875 3489999999999999999999
Q ss_pred EEEE
Q 006275 326 IVET 329 (652)
Q Consensus 326 ii~l 329 (652)
++.+
T Consensus 195 ~~~~ 198 (201)
T cd03231 195 ELDL 198 (201)
T ss_pred eEec
Confidence 9877
No 364
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-39 Score=335.50 Aligned_cols=211 Identities=20% Similarity=0.285 Sum_probs=170.1
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC-----CCCcEEEECCCC---------
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN--------- 160 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~i~~~~~~--------- 160 (652)
.++|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 23 ~~~l~~~nl~~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~ 102 (272)
T PRK14236 23 QTALEVRNLNLFYGDKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVA 102 (272)
T ss_pred CcEEEEEEEEEEECCeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHH
Confidence 346999999999988889999999999999999999999999999999999987 489999987632
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHH
Q 006275 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (652)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (652)
..++|++|++.++.. |+.||+...+... .. ......+.
T Consensus 103 ~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~---------------~~-----------------------~~~~~~~~ 143 (272)
T PRK14236 103 ELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQ---------------GI-----------------------NNRRVLDE 143 (272)
T ss_pred HHhccEEEEecCCccCcc-cHHHHHHHHHHhc---------------CC-----------------------CcHHHHHH
Confidence 259999999877654 9999985321100 00 00001122
Q ss_pred HHHHHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 006275 238 KVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (652)
Q Consensus 238 ~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIiv 312 (652)
++.++++.+++.. ...++.+.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .+.|||++
T Consensus 144 ~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiiv 223 (272)
T PRK14236 144 AVERSLRGAALWDEVKDRLHENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIV 223 (272)
T ss_pred HHHHHHHHcCCChhHHHHhhCCcccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEE
Confidence 3444555666532 245778899999999999999999999999999999999999999999888753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 313 sHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
||+++++.++||+|+++++|++. ..|+.+++.
T Consensus 224 tH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 255 (272)
T PRK14236 224 THNMQQAARVSDYTAFMYMGKLV-EYGDTDTLF 255 (272)
T ss_pred eCCHHHHHhhCCEEEEEECCEEE-ecCCHHHHh
Confidence 99999999999999999999974 567766543
No 365
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-39 Score=331.01 Aligned_cols=210 Identities=22% Similarity=0.379 Sum_probs=175.9
Q ss_pred eEEEeEEEEeCC----eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC-C----CCcEEEECCCC--------
Q 006275 98 VKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-P----DSGNVIKAKSN-------- 160 (652)
Q Consensus 98 i~v~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-p----~~G~i~~~~~~-------- 160 (652)
++++|++.+|.. .++++||||+|++||++||||.+||||||+.++|+|+++ | .+|+|.++|.+
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 789999999953 469999999999999999999999999999999999998 4 57899998852
Q ss_pred ------ceEEEEeccC--ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhC-C
Q 006275 161 ------MKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAV-N 231 (652)
Q Consensus 161 ------~~i~~v~Q~~--~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 231 (652)
..|+|++|+| .+.+-.||.+.+...+... ... .
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h--------------------------------------~~~~~ 123 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLH--------------------------------------GKGLS 123 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHh--------------------------------------hcchh
Confidence 2699999998 4545667777664322110 000 1
Q ss_pred hhcHHHHHHHHhhhcCCCcc--cccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----cC
Q 006275 232 LDTLDAKVSKLMPELGFTAD--DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQ 305 (652)
Q Consensus 232 ~~~~~~~i~~ll~~lgl~~~--~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~ 305 (652)
..+..+++.++|+.+|++.. ..+.++++|||||+|||.||.||+.+|++||.||||++||+..+.++.++|+ +.
T Consensus 124 ~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~ 203 (316)
T COG0444 124 KKEAKERAIELLELVGIPDPERRLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREK 203 (316)
T ss_pred hHHHHHHHHHHHHHcCCCCHHHHHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhc
Confidence 22345677889999999865 7799999999999999999999999999999999999999999999988774 47
Q ss_pred CCeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHHH
Q 006275 306 DVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVL 346 (652)
Q Consensus 306 g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~~ 346 (652)
|.|+|+||||+..+.++||||+||..|++ +..|+..++..
T Consensus 204 ~~aiilITHDl~vva~~aDri~VMYaG~i-VE~g~~~~i~~ 243 (316)
T COG0444 204 GTALILITHDLGVVAEIADRVAVMYAGRI-VEEGPVEEIFK 243 (316)
T ss_pred CCEEEEEeCCHHHHHHhcceEEEEECcEE-EEeCCHHHHhc
Confidence 99999999999999999999999999998 47787666544
No 366
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-39 Score=367.26 Aligned_cols=206 Identities=31% Similarity=0.558 Sum_probs=179.4
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccCc--cC
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFE--VS 173 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~~--~~ 173 (652)
.+|+++|++++|+++.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. .++||++|++. +.
T Consensus 318 ~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~-~~i~~~~q~~~~~~~ 396 (530)
T PRK15064 318 NALEVENLTKGFDNGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSEN-ANIGYYAQDHAYDFE 396 (530)
T ss_pred ceEEEEeeEEeeCCceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCc-eEEEEEcccccccCC
Confidence 4799999999998888999999999999999999999999999999999999999999999864 57999999974 33
Q ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccc
Q 006275 174 MSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDG 253 (652)
Q Consensus 174 ~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~ 253 (652)
...|+.+|+.. +.. ....+.++.++++.+|+..+..
T Consensus 397 ~~~t~~~~~~~-~~~-------------------------------------------~~~~~~~~~~~l~~~~l~~~~~ 432 (530)
T PRK15064 397 NDLTLFDWMSQ-WRQ-------------------------------------------EGDDEQAVRGTLGRLLFSQDDI 432 (530)
T ss_pred CCCcHHHHHHH-hcc-------------------------------------------CCccHHHHHHHHHHcCCChhHh
Confidence 46799988631 000 0011234567788889854567
Q ss_pred cCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcCCe
Q 006275 254 DRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGV 333 (652)
Q Consensus 254 ~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~ii~l~~G~ 333 (652)
++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|++.+.|||+||||++++..+||+|+++++|+
T Consensus 433 ~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~g~ 512 (530)
T PRK15064 433 KKSVKVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKYEGTLIFVSHDREFVSSLATRIIEITPDG 512 (530)
T ss_pred cCcccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 89999999999999999999999999999999999999999999999998877899999999999999999999999999
Q ss_pred EEEecCChHHHHH
Q 006275 334 SRTYEGNYSQYVL 346 (652)
Q Consensus 334 ~~~~~g~~~~~~~ 346 (652)
+..+.|++.++..
T Consensus 513 i~~~~g~~~~~~~ 525 (530)
T PRK15064 513 VVDFSGTYEEYLR 525 (530)
T ss_pred EEEcCCCHHHHHH
Confidence 8668899887754
No 367
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4e-40 Score=330.89 Aligned_cols=211 Identities=25% Similarity=0.373 Sum_probs=182.6
Q ss_pred ceEEEeEEEEeCCe------------------------eeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCc
Q 006275 97 GVKLENISKSYKGV------------------------TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSG 152 (652)
Q Consensus 97 ~i~v~~ls~~y~~~------------------------~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G 152 (652)
.|+++|+++-|+.+ .-++|+||+|++||+..|.|-+|||||||+++|.++++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 48899999999641 147899999999999999999999999999999999999999
Q ss_pred EEEECCCC--------------ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHH
Q 006275 153 NVIKAKSN--------------MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLD 218 (652)
Q Consensus 153 ~i~~~~~~--------------~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (652)
+|.++|.+ .++++|+|.+.++|..||.||+..++.
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLe------------------------------- 132 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLE------------------------------- 132 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhccee-------------------------------
Confidence 99999864 369999999999999999999864321
Q ss_pred HHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHH
Q 006275 219 EFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWL 298 (652)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l 298 (652)
...++..+-++++.+.++.+|+. .+.++++.+|||||||||.|||||+.+|+|||+|||||+|||--+..+
T Consensus 133 --------v~Gv~~~er~~~a~~~l~~VgL~-~~~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~m 203 (386)
T COG4175 133 --------VQGVPKAEREERALEALELVGLE-GYADKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEM 203 (386)
T ss_pred --------ecCCCHHHHHHHHHHHHHHcCch-hhhhcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHH
Confidence 01233445567788899999997 688999999999999999999999999999999999999999888887
Q ss_pred HHHH----ccCCCeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHHHHH
Q 006275 299 EGYL----GKQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEK 348 (652)
Q Consensus 299 ~~~L----~~~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~~~~ 348 (652)
.+.| ++.++|||+||||++++.++.|||..|++|++ +..|++.+.+...
T Consensus 204 QdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIaimkdG~i-vQ~Gtp~eIl~~P 256 (386)
T COG4175 204 QDELLELQAKLKKTIVFITHDLDEALRIGDRIAIMKDGEI-VQVGTPEEILLNP 256 (386)
T ss_pred HHHHHHHHHHhCCeEEEEecCHHHHHhccceEEEecCCeE-EEeCCHHHHHcCc
Confidence 7654 45689999999999999999999999999998 4778888776543
No 368
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-39 Score=331.67 Aligned_cols=208 Identities=19% Similarity=0.290 Sum_probs=168.6
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC-----CCCcEEEECCCC------------
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN------------ 160 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~i~~~~~~------------ 160 (652)
-+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|..
T Consensus 6 ~~~~~l~~~~~~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~ 85 (251)
T PRK14244 6 ASVKNLNLWYGSKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLR 85 (251)
T ss_pred EEeeeEEEEECCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHh
Confidence 578999999998889999999999999999999999999999999999986 479999998732
Q ss_pred ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHH
Q 006275 161 MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVS 240 (652)
Q Consensus 161 ~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 240 (652)
..++|++|++.+++ .|+.+|+...... .... .........+.
T Consensus 86 ~~i~~v~q~~~~~~-~tv~~ni~~~~~~---------------~~~~----------------------~~~~~~~~~~~ 127 (251)
T PRK14244 86 AKVGMVFQKPNPFP-KSIYDNVAYGPKL---------------HGLA----------------------KNKKKLDEIVE 127 (251)
T ss_pred hhEEEEecCccccc-CCHHHHHHHHHHh---------------cCCC----------------------CCHHHHHHHHH
Confidence 25999999987765 4999998522100 0000 00011223455
Q ss_pred HHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecC
Q 006275 241 KLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHD 315 (652)
Q Consensus 241 ~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd 315 (652)
++++.+|+.. ...++.+.+|||||||||+|||||+.+|++|||||||+|||+.+++.+.++|++ .++|||++||+
T Consensus 128 ~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~ 207 (251)
T PRK14244 128 KSLTSVGLWEELGDRLKDSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHS 207 (251)
T ss_pred HHHHHcCCCchhhhHhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 6777788753 235677899999999999999999999999999999999999999999888753 37899999999
Q ss_pred HHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 316 RAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 316 ~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
++++..+||+|++|++|++. +.|+.+++
T Consensus 208 ~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 235 (251)
T PRK14244 208 MKQAKKVSDRVAFFQSGRIV-EYNTTQEI 235 (251)
T ss_pred HHHHHhhcCEEEEEECCEEE-EeCCHHHH
Confidence 99999999999999999984 55665554
No 369
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-39 Score=316.01 Aligned_cols=206 Identities=28% Similarity=0.441 Sum_probs=178.6
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceeccc-----------c
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP-----------N 491 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~-----------~ 491 (652)
++++++|++..|+...+|++|||++++||+++|+||||+||||||++|+|+.+|.+|+|.++|.++.. .
T Consensus 2 ~mL~v~~l~~~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi~ 81 (237)
T COG0410 2 PMLEVENLSAGYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGIA 81 (237)
T ss_pred CceeEEeEeecccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCeE
Confidence 47999999999999999999999999999999999999999999999999999999999999998742 3
Q ss_pred eecccccccCCCCCCHHHHHHHhhhhc----c-HHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEE
Q 006275 492 YFEQNQAEALDLDKTVLETVAEAAEDW----R-IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (652)
Q Consensus 492 ~~~~~~~~~~~~~~tv~e~~~~~~~~~----~-~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLl 566 (652)
|++|. ...++.+||.||+..+.... . ...+.++.+.|---.+..+++.++|||||||.++|||||+.+|++|+
T Consensus 82 ~VPeg--R~iF~~LTVeENL~~g~~~~~~~~~~~~~~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~PklLL 159 (237)
T COG0410 82 YVPEG--RRIFPRLTVEENLLLGAYARRDKEAQERDLEEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSRPKLLL 159 (237)
T ss_pred eCccc--ccchhhCcHHHHHhhhhhcccccccccccHHHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcCCCEEE
Confidence 45543 46789999999998763211 1 11155566666544577899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhcC---c-eEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 567 LDEPTNHLDIPSKEMLEEAISEYK---G-TVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 567 LDEPt~~LD~~~~~~l~~~l~~~~---~-tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
|||||.||-|.-.+.+.++|++.. + ||++|-++..++.+++||.++|++|+++ +.|+.++..+.
T Consensus 160 LDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv-~~G~~~eL~~~ 227 (237)
T COG0410 160 LDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIV-LSGTAAELLAD 227 (237)
T ss_pred ecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEE-EecCHHHHhcC
Confidence 999999999999999999998653 3 9999999999999999999999999998 67988876544
No 370
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-39 Score=331.53 Aligned_cols=207 Identities=21% Similarity=0.293 Sum_probs=164.6
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC--C---CCcEEEECCCC----------
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE--P---DSGNVIKAKSN---------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~--p---~~G~i~~~~~~---------- 160 (652)
.+|+++|++++|+++++|+++||+|.+|++++|+|+||||||||+++|+|+++ | ++|+|.++|.+
T Consensus 4 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 83 (252)
T PRK14255 4 KIITSSDVHLFYGKFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQ 83 (252)
T ss_pred ceEEEEeEEEEECCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHH
Confidence 35899999999998889999999999999999999999999999999999875 5 58999998742
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
..++|++|++.+++ .|+.+|+...+... .. ......+..
T Consensus 84 ~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~---------------~~-----------------------~~~~~~~~~ 124 (252)
T PRK14255 84 LRKQVGMVFQQPNPFP-FSIYENVIYGLRLA---------------GV-----------------------KDKAVLDEA 124 (252)
T ss_pred hcCeEEEEECCCccCC-CcHHHHHHHHHHHc---------------CC-----------------------CCHHHHHHH
Confidence 25999999988766 79999985321100 00 000001112
Q ss_pred HHHHhhhcCCC---cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006275 239 VSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (652)
Q Consensus 239 i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (652)
+.+.++.+++. .+..++.+.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|++ .+.|||+||
T Consensus 125 ~~~~l~~~~l~~~i~~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vs 204 (252)
T PRK14255 125 VETSLKQAAIWDEVKDHLHESALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVT 204 (252)
T ss_pred HHHHHHHcCCccchhhHHhcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEE
Confidence 23334444432 1345778899999999999999999999999999999999999999999888753 258999999
Q ss_pred cCHHHHHhhcCeEEEEcCCeEEEecCChH
Q 006275 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYS 342 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~~G~~~~~~g~~~ 342 (652)
|+++++.++||+|+++++|++. ..|+..
T Consensus 205 H~~~~~~~~~d~i~~l~~G~i~-~~~~~~ 232 (252)
T PRK14255 205 HSMHQASRISDKTAFFLTGNLI-EFADTK 232 (252)
T ss_pred CCHHHHHHhCCEEEEEECCEEE-EeCCHH
Confidence 9999999999999999999985 445433
No 371
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-39 Score=334.78 Aligned_cols=207 Identities=27% Similarity=0.397 Sum_probs=172.7
Q ss_pred CCCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCeeEEEECceecc-----
Q 006275 420 SGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL----- 489 (652)
Q Consensus 420 ~~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~----- 489 (652)
+++++|+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.++|.++.
T Consensus 17 ~~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 96 (268)
T PRK14248 17 AKEHILEVKDLSIYYGEKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNIN 96 (268)
T ss_pred CCCceEEEEEEEEEeCCceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccccccc
Confidence 34568999999999998889999999999999999999999999999999999864 78999999997652
Q ss_pred -------cceecccccccCCCCCCHHHHHHHhhhh----c---cHHHHHHHHhhCCCC---hhhhccCcCCCCHHHHHHH
Q 006275 490 -------PNYFEQNQAEALDLDKTVLETVAEAAED----W---RIDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARL 552 (652)
Q Consensus 490 -------~~~~~~~~~~~~~~~~tv~e~~~~~~~~----~---~~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqrqrv 552 (652)
.+|++|+ ..+++ .|+.+|+...... . ....+.+.++.+++. ....++++.+||||||||+
T Consensus 97 ~~~~~~~i~~v~q~--~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrl 173 (268)
T PRK14248 97 VVNLRREIGMVFQK--PNPFP-KSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHSSALSLSGGQQQRL 173 (268)
T ss_pred HHHHhccEEEEecC--CccCc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHHHHhcCcccCCHHHHHHH
Confidence 1244443 23444 5999998764221 1 123456778888774 2346789999999999999
Q ss_pred HHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 553 AFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 553 ~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
+|||||+.+|++|||||||+|||+.++..+.++|+++ +.|||++|||++++..+|||+++|++|++.. .|+.++..+
T Consensus 174 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~~~ 252 (268)
T PRK14248 174 CIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVE-YDQTEQIFT 252 (268)
T ss_pred HHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEE-eCCHHHHHh
Confidence 9999999999999999999999999999999999876 3599999999999999999999999999974 577776654
No 372
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-39 Score=336.50 Aligned_cols=203 Identities=25% Similarity=0.359 Sum_probs=171.1
Q ss_pred EEEEEeeeeEeC-CeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-----------cc
Q 006275 424 VVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PN 491 (652)
Q Consensus 424 ~i~~~~v~~~y~-~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~ 491 (652)
+++++|++++|+ ++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 1 ml~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 1 MIRLENVSYSYPDGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred CEEEEEEEEEcCCCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 478999999995 567999999999999999999999999999999999999999999999998652 12
Q ss_pred eecccccccCCCCCCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeE
Q 006275 492 YFEQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (652)
Q Consensus 492 ~~~~~~~~~~~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lL 565 (652)
|++|+.. ...+..|+.+|+.+....+ ..+.+.++++.+++. ...++++.+|||||||||+|||||+.+|+||
T Consensus 81 ~v~q~~~-~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~laral~~~p~ll 158 (274)
T PRK13644 81 IVFQNPE-TQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLE-KYRHRSPKTLSGGQGQCVALAGILTMEPECL 158 (274)
T ss_pred EEEEChh-hhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCH-HHhcCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 4444321 1234679999997643221 123467889999994 6788999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 566 lLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||||||++||+.++..+.+.|+++ +.|||++|||++++. .|||+++|++|++. ..|+.+++..
T Consensus 159 lLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~-~~d~v~~l~~G~i~-~~g~~~~~~~ 224 (274)
T PRK13644 159 IFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELH-DADRIIVMDRGKIV-LEGEPENVLS 224 (274)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHh-hCCEEEEEECCEEE-EECCHHHHhc
Confidence 999999999999999999999754 469999999999995 59999999999987 4577776543
No 373
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-39 Score=331.20 Aligned_cols=204 Identities=26% Similarity=0.345 Sum_probs=172.4
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCC-----CeeEEEECceecc---------
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL--------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~--------- 489 (652)
+++++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 4 ~l~i~~v~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~ 83 (258)
T PRK14241 4 RIDVKDLNIYYGSFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAV 83 (258)
T ss_pred cEEEeeEEEEECCEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHH
Confidence 58999999999988999999999999999999999999999999999999974 7999999997652
Q ss_pred ---cceecccccccCCCCCCHHHHHHHhhhh-----c--cHHHHHHHHhhCCCC---hhhhccCcCCCCHHHHHHHHHHH
Q 006275 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED-----W--RIDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFCK 556 (652)
Q Consensus 490 ---~~~~~~~~~~~~~~~~tv~e~~~~~~~~-----~--~~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqrqrv~LAr 556 (652)
.+++.|. ..+++..|+.+|+...... . ..+.+.++++.+++. .+..++++.+|||||||||+|||
T Consensus 84 ~~~i~~~~q~--~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~lar 161 (258)
T PRK14241 84 RRTIGMVFQR--PNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKDRLDKPGGGLSGGQQQRLCIAR 161 (258)
T ss_pred hcceEEEccc--cccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHHHH
Confidence 1234443 3456678999999764321 0 123456788888873 24568899999999999999999
Q ss_pred HHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEe------CCEEEeecCChhhH
Q 006275 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVK------GSNLQDYAGDYNVC 628 (652)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~------~g~i~~~~g~~~~~ 628 (652)
||+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++.++|||+++|+ +|++. ..|++++.
T Consensus 162 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~-~~~~~~~~ 240 (258)
T PRK14241 162 AIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLV-EIDDTEKI 240 (258)
T ss_pred HHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEE-ecCCHHHH
Confidence 999999999999999999999999999999876 3599999999999999999999997 79987 45888776
Q ss_pred hh
Q 006275 629 FT 630 (652)
Q Consensus 629 ~~ 630 (652)
+.
T Consensus 241 ~~ 242 (258)
T PRK14241 241 FS 242 (258)
T ss_pred Hh
Confidence 54
No 374
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-39 Score=330.32 Aligned_cols=204 Identities=25% Similarity=0.361 Sum_probs=171.8
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCC---CCC--CeeEEEECceecc--------
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGL---EKP--RGGEVLLGEHNVL-------- 489 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~---~~p--~~G~i~~~g~~~~-------- 489 (652)
++|+++|+++.|+++.+|+++||+|++||+++|+||||||||||+++|+|+ .+| ++|+|.++|.++.
T Consensus 2 ~~l~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 81 (250)
T PRK14245 2 VKIDARDVNFWYGDFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDE 81 (250)
T ss_pred cEEEEEEEEEEECCEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHH
Confidence 479999999999988899999999999999999999999999999999997 455 5899999998752
Q ss_pred ----cceecccccccCCCCCCHHHHHHHhhhh-------ccHHHHHHHHhhCCCCh---hhhccCcCCCCHHHHHHHHHH
Q 006275 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED-------WRIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFC 555 (652)
Q Consensus 490 ----~~~~~~~~~~~~~~~~tv~e~~~~~~~~-------~~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqrqrv~LA 555 (652)
.+|++|. ..++. .|+.+|+...... .....+.++++.+++.. ...++++.+||||||||++||
T Consensus 82 ~~~~i~~v~q~--~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la 158 (250)
T PRK14245 82 LRKNVGMVFQR--PNPFP-KSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESAFALSGGQQQRLCIA 158 (250)
T ss_pred HhhheEEEecC--CccCc-ccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhhhhCCcccCCHHHHHHHHHH
Confidence 1344443 23443 6999999764321 11234678888888742 346788999999999999999
Q ss_pred HHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
|||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++|||+++|++|++. ..|++++..+
T Consensus 159 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~-~~~~~~~~~~ 234 (250)
T PRK14245 159 RAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMV-EYDDTKKIFT 234 (250)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEE-EECCHHHHhc
Confidence 9999999999999999999999999999999875 359999999999999999999999999997 4588887765
No 375
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=9.3e-40 Score=373.48 Aligned_cols=215 Identities=27% Similarity=0.434 Sum_probs=171.2
Q ss_pred CCceEEEeEEEEeCCe--eeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ce
Q 006275 95 SSGVKLENISKSYKGV--TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MK 162 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~--~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~ 162 (652)
...|+++|++|+|+.. ++|+|+||+|++||++||||+||||||||+|+|+|+++|++|+|.++|.+ ..
T Consensus 469 ~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ 548 (709)
T COG2274 469 QGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQ 548 (709)
T ss_pred CceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhh
Confidence 4569999999999765 59999999999999999999999999999999999999999999999864 36
Q ss_pred EEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHH
Q 006275 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (652)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (652)
||||+|++.+ ++.|++||+...-.+. ..+++..++..++ ..+.+.++
T Consensus 549 ig~V~Q~~~L-f~gSI~eNi~l~~p~~-----~~e~i~~A~~~ag---------------------------~~~fI~~l 595 (709)
T COG2274 549 VGYVLQDPFL-FSGSIRENIALGNPEA-----TDEEIIEAAQLAG---------------------------AHEFIENL 595 (709)
T ss_pred eeEEcccchh-hcCcHHHHHhcCCCCC-----CHHHHHHHHHHhC---------------------------cHHHHHhc
Confidence 9999999876 7889999996432110 0112222221111 01111111
Q ss_pred hhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHH
Q 006275 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLD 320 (652)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~ 320 (652)
-.|+.+..++ ....||||||||++|||||+++|+|||||||||+||+++++.+.+.|.+ .|+|+|+|||++..+
T Consensus 596 --P~gy~t~v~E-~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti- 671 (709)
T COG2274 596 --PMGYDTPVGE-GGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTI- 671 (709)
T ss_pred --cccccccccc-CCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHh-
Confidence 1244433333 3689999999999999999999999999999999999999999998865 469999999999999
Q ss_pred hhcCeEEEEcCCeEEEecCChHHHHHH
Q 006275 321 QLCTKIVETEMGVSRTYEGNYSQYVLE 347 (652)
Q Consensus 321 ~~~d~ii~l~~G~~~~~~g~~~~~~~~ 347 (652)
+.||+|++|++|++ ..+|+.++++..
T Consensus 672 ~~adrIiVl~~Gki-v~~gs~~ell~~ 697 (709)
T COG2274 672 RSADRIIVLDQGKI-VEQGSHEELLAQ 697 (709)
T ss_pred hhccEEEEccCCce-eccCCHHHHHHh
Confidence 56999999999998 588988877654
No 376
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-39 Score=372.41 Aligned_cols=212 Identities=21% Similarity=0.346 Sum_probs=177.8
Q ss_pred CCceEEEeEEEEeCC-----------eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---
Q 006275 95 SSGVKLENISKSYKG-----------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--- 160 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~-----------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--- 160 (652)
.++|+++|+++.|+. .++|++|||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+
T Consensus 311 ~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~ 390 (623)
T PRK10261 311 EPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDT 390 (623)
T ss_pred CceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCc
Confidence 357999999999961 469999999999999999999999999999999999999999999998742
Q ss_pred ----------ceEEEEeccC--ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHH
Q 006275 161 ----------MKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQ 228 (652)
Q Consensus 161 ----------~~i~~v~Q~~--~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (652)
..|+|++|++ .+++..||.+|+...+.. ..
T Consensus 391 ~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~---------------~~----------------------- 432 (623)
T PRK10261 391 LSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRV---------------HG----------------------- 432 (623)
T ss_pred CCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHH---------------cC-----------------------
Confidence 2599999997 466788999998532100 00
Q ss_pred hCChhcHHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----c
Q 006275 229 AVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----K 304 (652)
Q Consensus 229 ~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~ 304 (652)
.........++.++++.+|+.....++++.+|||||||||+|||||+.+|+||||||||++||+.++..+.++|+ +
T Consensus 433 ~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~ 512 (623)
T PRK10261 433 LLPGKAAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRD 512 (623)
T ss_pred CCCHHHHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh
Confidence 000112235677889999996456789999999999999999999999999999999999999999999998873 3
Q ss_pred CCCeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 305 QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 305 ~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
.|.|||+||||++++..+||+|++|.+|+++ +.|...++.
T Consensus 513 ~g~tvi~isHdl~~v~~~~dri~vl~~G~iv-~~g~~~~i~ 552 (623)
T PRK10261 513 FGIAYLFISHDMAVVERISHRVAVMYLGQIV-EIGPRRAVF 552 (623)
T ss_pred cCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EecCHHHHh
Confidence 5899999999999999999999999999984 667766653
No 377
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-39 Score=334.09 Aligned_cols=206 Identities=24% Similarity=0.355 Sum_probs=173.2
Q ss_pred CCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCC-----CeeEEEECceecc------
Q 006275 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL------ 489 (652)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~------ 489 (652)
..+.|+++||+++|+++.+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 16 ~~~~l~~~nl~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~ 95 (267)
T PRK14235 16 TEIKMRARDVSVFYGEKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDV 95 (267)
T ss_pred CCceEEEEeEEEEECCEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccch
Confidence 34579999999999988999999999999999999999999999999999999974 8999999997752
Q ss_pred ------cceecccccccCCCCCCHHHHHHHhhh--h-----cc-HHHHHHHHhhCCCCh---hhhccCcCCCCHHHHHHH
Q 006275 490 ------PNYFEQNQAEALDLDKTVLETVAEAAE--D-----WR-IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARL 552 (652)
Q Consensus 490 ------~~~~~~~~~~~~~~~~tv~e~~~~~~~--~-----~~-~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqrqrv 552 (652)
.+|+.|. ..+++ .|+.+|+.+... . .. ...+.++++.+++.. ...++++.+||||||||+
T Consensus 96 ~~~~~~i~~v~q~--~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv 172 (267)
T PRK14235 96 VELRARVGMVFQK--PNPFP-KSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKDRLHEPGTGLSGGQQQRL 172 (267)
T ss_pred HHHhhceEEEecC--CCCCC-CcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHH
Confidence 1234443 23444 599999976431 1 11 234677899999853 245788999999999999
Q ss_pred HHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 553 AFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 553 ~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
+|||||+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+||++++|++|++.. .|+.+++..
T Consensus 173 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~-~g~~~~~~~ 251 (267)
T PRK14235 173 CIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVE-VGDTEKMFT 251 (267)
T ss_pred HHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEE-eCCHHHHHh
Confidence 9999999999999999999999999999999999876 3599999999999999999999999999974 577776653
No 378
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-40 Score=309.55 Aligned_cols=197 Identities=25% Similarity=0.362 Sum_probs=171.1
Q ss_pred CceEEEeEEEEeCCee--eeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----ceEEEEec
Q 006275 96 SGVKLENISKSYKGVT--VLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----MKIAFLSQ 168 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~--vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----~~i~~v~Q 168 (652)
+++.+++++.+|++++ +|+|+|++|.+||.++++||+||||||||++++|+++|+.|+|.+++.+ ..-|.|+|
T Consensus 2 ~~l~~~~~sl~y~g~~~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~~G~i~l~~r~i~gPgaergvVFQ 81 (259)
T COG4525 2 CMLNVSHLSLSYEGKPRSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPSRGSIQLNGRRIEGPGAERGVVFQ 81 (259)
T ss_pred ceeehhheEEecCCcchhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcccceEEECCEeccCCCccceeEec
Confidence 3578899999999877 9999999999999999999999999999999999999999999998653 35799999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCC
Q 006275 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (652)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (652)
++.+.+.+|+.+|+..++.- ..++..+-...+.+.+..+|+
T Consensus 82 ~~~LlPWl~~~dNvafgL~l---------------------------------------~Gi~k~~R~~~a~q~l~~VgL 122 (259)
T COG4525 82 NEALLPWLNVIDNVAFGLQL---------------------------------------RGIEKAQRREIAHQMLALVGL 122 (259)
T ss_pred cCccchhhHHHHHHHHHHHh---------------------------------------cCCCHHHHHHHHHHHHHHhCc
Confidence 99999999999998744321 012222234456678888899
Q ss_pred CcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHhhcC
Q 006275 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQLCT 324 (652)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L----~~~g~tvIivsHd~~~l~~~~d 324 (652)
. +..++++.+|||||||||.|||||+.+|++|+||||+.+||.-+++.+.++| ++.|+.+++||||++++.-+++
T Consensus 123 ~-~~~~~~i~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk~~lliTH~ieEAlflat 201 (259)
T COG4525 123 E-GAEHKYIWQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETGKQVLLITHDIEEALFLAT 201 (259)
T ss_pred c-cccccceEeecchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHhhhh
Confidence 7 5668899999999999999999999999999999999999999998887654 6789999999999999999999
Q ss_pred eEEEEcCC
Q 006275 325 KIVETEMG 332 (652)
Q Consensus 325 ~ii~l~~G 332 (652)
++++|..|
T Consensus 202 rLvvlsp~ 209 (259)
T COG4525 202 RLVVLSPG 209 (259)
T ss_pred eeEEecCC
Confidence 99999865
No 379
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-39 Score=329.41 Aligned_cols=205 Identities=25% Similarity=0.371 Sum_probs=172.7
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC--C---CeeEEEECceecc--------
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK--P---RGGEVLLGEHNVL-------- 489 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~--p---~~G~i~~~g~~~~-------- 489 (652)
..|+++|++++|+++.+|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.++.
T Consensus 3 ~~l~~~nl~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~ 82 (252)
T PRK14256 3 NKVKLEQLNVHFGKNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVS 82 (252)
T ss_pred cEEEEEEEEEEeCCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHH
Confidence 35899999999998889999999999999999999999999999999999986 4 6899999997752
Q ss_pred ----cceecccccccCCCCCCHHHHHHHhhhh---c----cHHHHHHHHhhCCCCh---hhhccCcCCCCHHHHHHHHHH
Q 006275 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED---W----RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFC 555 (652)
Q Consensus 490 ----~~~~~~~~~~~~~~~~tv~e~~~~~~~~---~----~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqrqrv~LA 555 (652)
.+|++|+ ..+++..|+.+|+...... . ....+.++++.+++.. +..++.+.+||||||||++||
T Consensus 83 ~~~~i~~~~q~--~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrl~la 160 (252)
T PRK14256 83 IRRRVGMVFQK--PNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDRLKSNAMELSGGQQQRLCIA 160 (252)
T ss_pred hhccEEEEecC--CCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcCcCCHHHHHHHHHH
Confidence 1234443 3456678999999754211 1 1234677888888743 345788999999999999999
Q ss_pred HHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
|||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+|||+++|++|++.. .|+.+++..
T Consensus 161 ral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~~ 236 (252)
T PRK14256 161 RTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVE-CGETKKIFT 236 (252)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEE-eCCHHHHHh
Confidence 9999999999999999999999999999999876 4599999999999999999999999999974 577776643
No 380
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-39 Score=330.40 Aligned_cols=205 Identities=24% Similarity=0.339 Sum_probs=171.2
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCC--CC---CeeEEEECceecc--------
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLE--KP---RGGEVLLGEHNVL-------- 489 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~--~p---~~G~i~~~g~~~~-------- 489 (652)
++|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+. +| ++|+|.++|.++.
T Consensus 4 ~~l~~~~l~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 83 (252)
T PRK14239 4 PILQVSDLSVYYNKKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVD 83 (252)
T ss_pred ceEEEEeeEEEECCeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHh
Confidence 4799999999999888999999999999999999999999999999999995 46 5999999997652
Q ss_pred ----cceecccccccCCCCCCHHHHHHHhhhh---c----cHHHHHHHHhhCCCCh---hhhccCcCCCCHHHHHHHHHH
Q 006275 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED---W----RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFC 555 (652)
Q Consensus 490 ----~~~~~~~~~~~~~~~~tv~e~~~~~~~~---~----~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqrqrv~LA 555 (652)
.+|++|+ ..++ ..|+.+|+...... . ....+.++++.+++.. +..++++.+|||||||||+||
T Consensus 84 ~~~~i~~v~q~--~~~~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la 160 (252)
T PRK14239 84 LRKEIGMVFQQ--PNPF-PMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKDRLHDSALGLSGGQQQRVCIA 160 (252)
T ss_pred hhhcEEEEecC--CccC-cCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHHHHhcCcccCCHHHHHHHHHH
Confidence 1244443 2344 37999999764211 1 1234566788888632 346889999999999999999
Q ss_pred HHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
|||+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+|||+++|++|++.. .|+.++..+.
T Consensus 161 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~~ 237 (252)
T PRK14239 161 RVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIE-YNDTKQMFMN 237 (252)
T ss_pred HHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEE-eCCHHHHHhC
Confidence 9999999999999999999999999999999875 3699999999999999999999999999974 5777776543
No 381
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.5e-39 Score=326.99 Aligned_cols=200 Identities=29% Similarity=0.505 Sum_probs=154.7
Q ss_pred ceEEEeEEEEeCC--eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEE
Q 006275 97 GVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIA 164 (652)
Q Consensus 97 ~i~v~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~ 164 (652)
.|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++
T Consensus 2 ~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (220)
T cd03245 2 RIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNIG 81 (220)
T ss_pred eEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhEE
Confidence 3899999999975 569999999999999999999999999999999999999999999998742 2599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhh
Q 006275 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (652)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (652)
|++|++.+++ .|+.||+....... . . ..+...++. . .+. ++++
T Consensus 82 ~~~q~~~~~~-~tv~e~l~~~~~~~-~-~---~~~~~~l~~------------------------~---~l~----~~~~ 124 (220)
T cd03245 82 YVPQDVTLFY-GTLRDNITLGAPLA-D-D---ERILRAAEL------------------------A---GVT----DFVN 124 (220)
T ss_pred EeCCCCcccc-chHHHHhhcCCCCC-C-H---HHHHHHHHH------------------------c---CcH----HHHH
Confidence 9999987754 69999975321000 0 0 000000000 0 001 1111
Q ss_pred hc--CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHH
Q 006275 245 EL--GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLD 320 (652)
Q Consensus 245 ~l--gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~ 320 (652)
.+ |+.+. ..+.+.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|++ .++|||++||+++++
T Consensus 125 ~~~~~~~~~-~~~~~~~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~- 202 (220)
T cd03245 125 KHPNGLDLQ-IGERGRGLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLL- 202 (220)
T ss_pred hccccccce-ecCCCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHH-
Confidence 11 22211 2334689999999999999999999999999999999999999999998854 247999999999987
Q ss_pred hhcCeEEEEcCCeEE
Q 006275 321 QLCTKIVETEMGVSR 335 (652)
Q Consensus 321 ~~~d~ii~l~~G~~~ 335 (652)
.+||+++++++|++.
T Consensus 203 ~~~d~v~~l~~g~i~ 217 (220)
T cd03245 203 DLVDRIIVMDSGRIV 217 (220)
T ss_pred HhCCEEEEEeCCeEe
Confidence 799999999999874
No 382
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-39 Score=330.23 Aligned_cols=209 Identities=22% Similarity=0.279 Sum_probs=168.0
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC--C---CCcEEEECCCC----------
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE--P---DSGNVIKAKSN---------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~--p---~~G~i~~~~~~---------- 160 (652)
++|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+ | ++|+|.++|.+
T Consensus 5 ~~i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 84 (253)
T PRK14261 5 IILSTKNLNLWYGEKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVA 84 (253)
T ss_pred ceEEEeeeEEEECCeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhh
Confidence 46999999999998889999999999999999999999999999999999975 3 48999988632
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
..|+|++|++.++. .||+||+...... .. ..+....+..
T Consensus 85 ~~~~i~~~~q~~~~~~-~tv~eni~~~~~~--------------~~------------------------~~~~~~~~~~ 125 (253)
T PRK14261 85 LRRKIGMVFQRPNPFP-KSIYENVAYGPRI--------------HG------------------------EKNKKTLDTI 125 (253)
T ss_pred hhceEEEEecCCccCc-ccHHHHHHhhHHh--------------cC------------------------CCCHHHHHHH
Confidence 24999999987765 5999998522100 00 0000011233
Q ss_pred HHHHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006275 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (652)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (652)
+.++++.+++.. ...++.+.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|++ .++|||++|
T Consensus 126 ~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~s 205 (253)
T PRK14261 126 VEKSLKGAALWDEVKDRLHDSALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVT 205 (253)
T ss_pred HHHHHHHhcCchhhHHHhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEE
Confidence 444555555531 235778899999999999999999999999999999999999999999888753 368999999
Q ss_pred cCHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
|+++++..+||++++|++|++. ..|+.+++
T Consensus 206 h~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~ 235 (253)
T PRK14261 206 HNMQQAARVSDYTGFMYLGKLI-EFDKTTQI 235 (253)
T ss_pred cCHHHHHhhCCEEEEEECCEEE-EcCCHHHH
Confidence 9999999999999999999984 56766554
No 383
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-39 Score=331.39 Aligned_cols=210 Identities=20% Similarity=0.260 Sum_probs=170.6
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCC-----CcEEEECCCC----------
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD-----SGNVIKAKSN---------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~-----~G~i~~~~~~---------- 160 (652)
+.|+++|++++|++..+|+|+||+|++|++++|+|+||||||||+++|+|+++|+ +|+|.++|.+
T Consensus 6 ~~l~~~nl~~~~~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~~ 85 (261)
T PRK14258 6 PAIKVNNLSFYYDTQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLNR 85 (261)
T ss_pred ceEEEeeEEEEeCCeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchHH
Confidence 3699999999998878999999999999999999999999999999999999985 8999887632
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
..++|++|++.+++ .|+.||+...... ... .........
T Consensus 86 ~~~~i~~~~q~~~l~~-~tv~enl~~~~~~---------------~~~-----------------------~~~~~~~~~ 126 (261)
T PRK14258 86 LRRQVSMVHPKPNLFP-MSVYDNVAYGVKI---------------VGW-----------------------RPKLEIDDI 126 (261)
T ss_pred hhccEEEEecCCccCc-ccHHHHHHHHHHh---------------cCC-----------------------CcHHHHHHH
Confidence 24999999987765 8999998532100 000 000011233
Q ss_pred HHHHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEE
Q 006275 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVI 311 (652)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIi 311 (652)
+.++++.+|+.. +..++++.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|++ .+.|||+
T Consensus 127 ~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiii 206 (261)
T PRK14258 127 VESALKDADLWDEIKHKIHKSALDLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVI 206 (261)
T ss_pred HHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 455666666531 346788899999999999999999999999999999999999999999887753 4899999
Q ss_pred EecCHHHHHhhcCeEEEEcC-----CeEEEecCChHHHH
Q 006275 312 ISHDRAFLDQLCTKIVETEM-----GVSRTYEGNYSQYV 345 (652)
Q Consensus 312 vsHd~~~l~~~~d~ii~l~~-----G~~~~~~g~~~~~~ 345 (652)
|||+++++..+||+|++|++ |++ ...|+.+++.
T Consensus 207 vsH~~~~i~~~~d~i~~l~~~~~~~G~i-~~~~~~~~~~ 244 (261)
T PRK14258 207 VSHNLHQVSRLSDFTAFFKGNENRIGQL-VEFGLTKKIF 244 (261)
T ss_pred EECCHHHHHHhcCEEEEEccCCCcCceE-EEeCCHHHHH
Confidence 99999999999999999999 887 4667766653
No 384
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=3.1e-39 Score=331.52 Aligned_cols=214 Identities=20% Similarity=0.278 Sum_probs=171.9
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcC--CCCCCcEEEECCCC-----------ce
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQ--EEPDSGNVIKAKSN-----------MK 162 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~--~~p~~G~i~~~~~~-----------~~ 162 (652)
++|+++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+ ++|++|+|.++|.+ ..
T Consensus 6 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 85 (252)
T CHL00131 6 PILEIKNLHASVNENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHLG 85 (252)
T ss_pred ceEEEEeEEEEeCCEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhheee
Confidence 369999999999888899999999999999999999999999999999998 58999999997632 14
Q ss_pred EEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHH
Q 006275 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (652)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (652)
++|++|++.+++..|+.+|+...+.... ..... ..........++.++
T Consensus 86 ~~~~~q~~~~~~~~~~~~~l~~~~~~~~-----------~~~~~---------------------~~~~~~~~~~~~~~~ 133 (252)
T CHL00131 86 IFLAFQYPIEIPGVSNADFLRLAYNSKR-----------KFQGL---------------------PELDPLEFLEIINEK 133 (252)
T ss_pred EEEEeccccccccccHHHHHHHhhhhhh-----------ccccc---------------------ccccHHHHHHHHHHH
Confidence 8899999888777899888743211000 00000 000111223456677
Q ss_pred hhhcCCCcccccCCCC-CCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHH
Q 006275 243 MPELGFTADDGDRLVA-SFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAF 318 (652)
Q Consensus 243 l~~lgl~~~~~~~~~~-~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~ 318 (652)
++.+|+.....++++. .|||||||||+|||||+.+|+||||||||+|||+.++.++.++|+ +.|+|||++||++++
T Consensus 134 l~~~~l~~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~ 213 (252)
T CHL00131 134 LKLVGMDPSFLSRNVNEGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRL 213 (252)
T ss_pred HHHcCCchhhhccccccCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH
Confidence 8888986445677776 599999999999999999999999999999999999999988875 358999999999999
Q ss_pred HHhh-cCeEEEEcCCeEEEecCChH
Q 006275 319 LDQL-CTKIVETEMGVSRTYEGNYS 342 (652)
Q Consensus 319 l~~~-~d~ii~l~~G~~~~~~g~~~ 342 (652)
+..+ ||+++++++|++. +.|+.+
T Consensus 214 ~~~~~~d~i~~l~~G~i~-~~~~~~ 237 (252)
T CHL00131 214 LDYIKPDYVHVMQNGKII-KTGDAE 237 (252)
T ss_pred HHhhhCCEEEEEeCCEEE-EecChh
Confidence 9877 8999999999984 666644
No 385
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.3e-39 Score=323.36 Aligned_cols=192 Identities=23% Similarity=0.404 Sum_probs=166.7
Q ss_pred CCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-------ccee
Q 006275 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------PNYF 493 (652)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------~~~~ 493 (652)
++++|+++|++++|+++.+++++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 8 ~~~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~~~~~~i~~~ 87 (214)
T PRK13543 8 APPLLAAHALAFSRNEEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRGDRSRFMAYL 87 (214)
T ss_pred CcceEEEeeEEEecCCceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccchhhhhceEEe
Confidence 446899999999998888999999999999999999999999999999999999999999999997653 2344
Q ss_pred cccccccCCCCCCHHHHHHHhhhh---ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCC
Q 006275 494 EQNQAEALDLDKTVLETVAEAAED---WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (652)
Q Consensus 494 ~~~~~~~~~~~~tv~e~~~~~~~~---~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEP 570 (652)
.|+ ..+++..|+.+|+...... .....+.++++.+++. +..++++.+||||||||++||||++.+|++||||||
T Consensus 88 ~q~--~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP 164 (214)
T PRK13543 88 GHL--PGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIVGLA-GYEDTLVRQLSAGQKKRLALARLWLSPAPLWLLDEP 164 (214)
T ss_pred ecC--cccccCCcHHHHHHHHHHhcCCcHHHHHHHHHHHcCCh-hhccCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 443 3455667999998764321 1234467889999995 567999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeC
Q 006275 571 TNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKG 615 (652)
Q Consensus 571 t~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~ 615 (652)
|++||+.+++.+.+.|.++ +.|||++|||++++.++||++++++.
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 165 YANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred cccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 9999999999999999765 56999999999999999999999864
No 386
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-39 Score=335.77 Aligned_cols=203 Identities=28% Similarity=0.436 Sum_probs=173.3
Q ss_pred cEEEEEeeeeEeCC--eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------c
Q 006275 423 SVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------P 490 (652)
Q Consensus 423 ~~i~~~~v~~~y~~--~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~ 490 (652)
++|+++||++.|++ +++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 4 ~~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 4 EIIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred ceEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 47999999999974 56999999999999999999999999999999999999999999999998763 2
Q ss_pred ceecccccccCCCCCCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCe
Q 006275 491 NYFEQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (652)
Q Consensus 491 ~~~~~~~~~~~~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~l 564 (652)
+|++|+.. .+.+..|+.+|+....... ....+.++++.+|+. ...++++.+|||||||||+|||||+.+|+|
T Consensus 84 ~~~~q~~~-~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LS~G~~qrv~laral~~~p~l 161 (279)
T PRK13635 84 GMVFQNPD-NQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGME-DFLNREPHRLSGGQKQRVAIAGVLALQPDI 161 (279)
T ss_pred EEEEeCHH-HhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCCh-hhhhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 34555431 2455689999997643211 123478889999995 678999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 565 LVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 565 LlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
|||||||+|||+.++..+.++|+++ +.|||+||||++++.. |||+++|++|++. +.|+.++..
T Consensus 162 llLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~-~d~i~~l~~G~i~-~~g~~~~~~ 228 (279)
T PRK13635 162 IILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQ-ADRVIVMNKGEIL-EEGTPEEIF 228 (279)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHc-CCEEEEEECCEEE-EECCHHHHh
Confidence 9999999999999999999999764 4599999999999975 9999999999987 457766543
No 387
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-39 Score=341.47 Aligned_cols=211 Identities=21% Similarity=0.317 Sum_probs=167.2
Q ss_pred CCceEEEeEEEEeC--CeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC-----CCCcEEEECCCC-------
Q 006275 95 SSGVKLENISKSYK--GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN------- 160 (652)
Q Consensus 95 ~~~i~v~~ls~~y~--~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~i~~~~~~------- 160 (652)
...|+++|++++|. ..++|+|+||+|++|+++||+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 78 ~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~ 157 (329)
T PRK14257 78 ANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKIS 157 (329)
T ss_pred CceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 35799999999995 3569999999999999999999999999999999999986 579999988753
Q ss_pred -----ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcH
Q 006275 161 -----MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTL 235 (652)
Q Consensus 161 -----~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (652)
.+++|++|+|+++ +.|+++|+..... .. .. .+. ...
T Consensus 158 ~~~lr~~i~~v~q~~~~~-~~ti~eNi~~~~~--~~-------------~~-~~~----------------------~~~ 198 (329)
T PRK14257 158 SLELRTRIGMVFQKPTPF-EMSIFDNVAYGPR--NN-------------GI-NDR----------------------KIL 198 (329)
T ss_pred hHhhhccEEEEecCCccC-CCcHHHHHHhHHH--hc-------------CC-ChH----------------------HHH
Confidence 2599999999875 6899999862210 00 00 000 000
Q ss_pred HHHHHHHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEE
Q 006275 236 DAKVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMV 310 (652)
Q Consensus 236 ~~~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvI 310 (652)
+..+..+++.+++.. ...++.+.+|||||||||+|||||+.+|+||||||||++||+.+..++.+.|++ .++|||
T Consensus 199 ~~~~~~~l~~~~L~~~l~~~~~~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii 278 (329)
T PRK14257 199 EKIVEKSLKSAALWDEVKDDLDKAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSII 278 (329)
T ss_pred HHHHHHHHHHcCCcchhhhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEE
Confidence 111223334444321 234677899999999999999999999999999999999999999999887753 368999
Q ss_pred EEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 311 IISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 311 ivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
+|||+++++.++||||++|++|++. ..|++.++.
T Consensus 279 ~iTH~l~~i~~~~Driivl~~G~i~-e~g~~~~l~ 312 (329)
T PRK14257 279 IVTHSMAQAQRISDETVFFYQGWIE-EAGETKTIF 312 (329)
T ss_pred EEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHh
Confidence 9999999999999999999999984 668877654
No 388
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-39 Score=332.62 Aligned_cols=208 Identities=18% Similarity=0.274 Sum_probs=165.2
Q ss_pred CceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC-----CCCcEEEECCCC----------
Q 006275 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN---------- 160 (652)
Q Consensus 96 ~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~i~~~~~~---------- 160 (652)
++|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 9 ~~l~i~~v~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 88 (264)
T PRK14243 9 TVLRTENLNVYYGSFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPVE 88 (264)
T ss_pred eEEEEeeeEEEECCEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChHH
Confidence 46999999999998889999999999999999999999999999999999976 489999998742
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHH
Q 006275 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (652)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (652)
..|+|++|++.+++ .|+.+|+....... . .. ....+.
T Consensus 89 ~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~-~-----------~~----------------------------~~~~~~ 127 (264)
T PRK14243 89 VRRRIGMVFQKPNPFP-KSIYDNIAYGARIN-G-----------YK----------------------------GDMDEL 127 (264)
T ss_pred HhhhEEEEccCCcccc-ccHHHHHHhhhhhc-C-----------cc----------------------------hHHHHH
Confidence 24999999987755 59999985321100 0 00 000111
Q ss_pred HHHHhhhcCCC---cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006275 239 VSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (652)
Q Consensus 239 i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (652)
+.++++.+++. ....++.+.+||||||||++|||||+.+|++|||||||+|||+.++.++.++|++ .+.|||++|
T Consensus 128 ~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vt 207 (264)
T PRK14243 128 VERSLRQAALWDEVKDKLKQSGLSLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVT 207 (264)
T ss_pred HHHHHHHhCchhhHHHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 22233333332 1235677899999999999999999999999999999999999999999988753 258999999
Q ss_pred cCHHHHHhhcCeEEEEc---------CCeEEEecCChHHHH
Q 006275 314 HDRAFLDQLCTKIVETE---------MGVSRTYEGNYSQYV 345 (652)
Q Consensus 314 Hd~~~l~~~~d~ii~l~---------~G~~~~~~g~~~~~~ 345 (652)
|+++++.++||+|++|+ +|++ ...|...++.
T Consensus 208 H~~~~~~~~~d~v~~l~~~~~~~~~~~g~i-~~~~~~~~~~ 247 (264)
T PRK14243 208 HNMQQAARVSDMTAFFNVELTEGGGRYGYL-VEFDRTEKIF 247 (264)
T ss_pred cCHHHHHHhCCEEEEEecccccccccCceE-EEeCCHHHHH
Confidence 99999999999999998 6877 4667665553
No 389
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=5.3e-39 Score=367.28 Aligned_cols=206 Identities=25% Similarity=0.404 Sum_probs=178.1
Q ss_pred CCcEEEEEeeeeEeCCe--eeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------
Q 006275 421 GRSVVTIKNLEFGYEDR--LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (652)
Q Consensus 421 ~~~~i~~~~v~~~y~~~--~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------- 489 (652)
-.+.|+++||+|+|+.. ++|+|+||+|++||++||+|+||||||||+|+|.|+++|++|+|.+||.++.
T Consensus 468 ~~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~ 547 (709)
T COG2274 468 LQGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRR 547 (709)
T ss_pred cCceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHh
Confidence 34569999999999854 6999999999999999999999999999999999999999999999999863
Q ss_pred -cceecccccccCCCCCCHHHHHHHhhhhccHHHHHHHHhhCCCChhhh----------ccCcCCCCHHHHHHHHHHHHH
Q 006275 490 -PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADML----------DRKVSLLSGGEKARLAFCKFM 558 (652)
Q Consensus 490 -~~~~~~~~~~~~~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~----------~~~~~~LSgGqrqrv~LAral 558 (652)
.+++.|+ ...++.|+.||+..+......+++.+++...|...... .....+||||||||++||||+
T Consensus 548 ~ig~V~Q~---~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaL 624 (709)
T COG2274 548 QVGYVLQD---PFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARAL 624 (709)
T ss_pred heeEEccc---chhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHh
Confidence 2455554 35678999999999877777777777777666643221 234458999999999999999
Q ss_pred ccCCCeEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
+++|+|||||||||+||+++++.+.+.|.+.. .|+|+|||++.++.. ||||++|++|+|+ .+|+.++.++.
T Consensus 625 l~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~-adrIiVl~~Gkiv-~~gs~~ell~~ 697 (709)
T COG2274 625 LSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRS-ADRIIVLDQGKIV-EQGSHEELLAQ 697 (709)
T ss_pred ccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhh-ccEEEEccCCcee-ccCCHHHHHHh
Confidence 99999999999999999999999999999875 799999999999976 9999999999998 47998887765
No 390
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-39 Score=335.81 Aligned_cols=210 Identities=23% Similarity=0.357 Sum_probs=168.5
Q ss_pred ceEEEeEEEEeC-CeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-------ceEEEEec
Q 006275 97 GVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------MKIAFLSQ 168 (652)
Q Consensus 97 ~i~v~~ls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-------~~i~~v~Q 168 (652)
.|+++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|
T Consensus 6 ~l~~~~l~~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~i~~v~q 85 (272)
T PRK15056 6 GIVVNDVTVTWRNGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQALQKNLVAYVPQ 85 (272)
T ss_pred eEEEEeEEEEecCCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHHhhccceEEEecc
Confidence 589999999996 5779999999999999999999999999999999999999999999998743 25999999
Q ss_pred cCccC--CCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhc
Q 006275 169 EFEVS--MSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (652)
Q Consensus 169 ~~~~~--~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (652)
++.+. ...++.+++.......... + .......+.++.++++.+
T Consensus 86 ~~~~~~~~~~~~~~~i~~~~~~~~~~----------~-------------------------~~~~~~~~~~~~~~l~~~ 130 (272)
T PRK15056 86 SEEVDWSFPVLVEDVVMMGRYGHMGW----------L-------------------------RRAKKRDRQIVTAALARV 130 (272)
T ss_pred ccccccCCCcchhhheeccccccccc----------c-------------------------cCCCHHHHHHHHHHHHHc
Confidence 97543 2346777764211000000 0 000011233456678888
Q ss_pred CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhc
Q 006275 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLC 323 (652)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~ 323 (652)
|+. +..++++.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|+ +.|+|||++||+++++..+|
T Consensus 131 gl~-~~~~~~~~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~ 209 (272)
T PRK15056 131 DMV-EFRHRQIGELSGGQKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFC 209 (272)
T ss_pred CCh-hHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhC
Confidence 886 56788999999999999999999999999999999999999999999998874 35889999999999999999
Q ss_pred CeEEEEcCCeEEEecCChHHH
Q 006275 324 TKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 324 d~ii~l~~G~~~~~~g~~~~~ 344 (652)
|+++.+ +|++ .+.|+.+++
T Consensus 210 d~v~~~-~G~i-~~~g~~~~~ 228 (272)
T PRK15056 210 DYTVMV-KGTV-LASGPTETT 228 (272)
T ss_pred CEEEEE-CCEE-EeecCHHhc
Confidence 999877 7887 456765553
No 391
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.5e-39 Score=330.81 Aligned_cols=208 Identities=25% Similarity=0.422 Sum_probs=163.8
Q ss_pred eEEEeEEEEeCC--eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEEE
Q 006275 98 VKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (652)
Q Consensus 98 i~v~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~~ 165 (652)
|+++|++++|++ +++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 478999999964 569999999999999999999999999999999999999999999998743 25999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh
Q 006275 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (652)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (652)
++|++.++ ..||.+|+...... ... +.+...++ ...+.++++.
T Consensus 81 ~~q~~~~~-~~tv~~nl~~~~~~-~~~----~~~~~~~~-------------------------------~~~~~~~l~~ 123 (237)
T cd03252 81 VLQENVLF-NRSIRDNIALADPG-MSM----ERVIEAAK-------------------------------LAGAHDFISE 123 (237)
T ss_pred EcCCchhc-cchHHHHhhccCCC-CCH----HHHHHHHH-------------------------------HcCcHHHHHh
Confidence 99998764 57999998531100 000 00000000 0011223333
Q ss_pred c--CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHh
Q 006275 246 L--GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQ 321 (652)
Q Consensus 246 l--gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~ 321 (652)
+ |+. ...++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.+.|++ .|+|||++||+++++.
T Consensus 124 l~~~~~-~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~- 201 (237)
T cd03252 124 LPEGYD-TIVGEQGAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVK- 201 (237)
T ss_pred Cccccc-chhhcCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHH-
Confidence 3 443 345678899999999999999999999999999999999999999999888753 4889999999999995
Q ss_pred hcCeEEEEcCCeEEEecCChHHHH
Q 006275 322 LCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 322 ~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
.||+++++++|++. +.|+..++.
T Consensus 202 ~~d~v~~l~~G~i~-~~~~~~~~~ 224 (237)
T cd03252 202 NADRIIVMEKGRIV-EQGSHDELL 224 (237)
T ss_pred hCCEEEEEECCEEE-EEcCHHHHH
Confidence 69999999999984 667766554
No 392
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-39 Score=325.46 Aligned_cols=202 Identities=29% Similarity=0.447 Sum_probs=173.6
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------cceeccc
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQN 496 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~~~ 496 (652)
|+++|++++|+++.+|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++. .++.+|+
T Consensus 1 l~~~~l~~~~~~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~ 80 (232)
T cd03300 1 IELENVSKFYGGFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPHKRPVNTVFQN 80 (232)
T ss_pred CEEEeEEEEeCCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcceEEEecc
Confidence 46899999999889999999999999999999999999999999999999999999999998652 2344443
Q ss_pred ccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCC
Q 006275 497 QAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (652)
Q Consensus 497 ~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEP 570 (652)
..++...|+.+|+...... .....+..+++.+++. +..++.+.+||+|||||++|||||+.+|++||||||
T Consensus 81 --~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~lS~G~~qrl~laral~~~p~llllDEP 157 (232)
T cd03300 81 --YALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLE-GYANRKPSQLSGGQQQRVAIARALVNEPKVLLLDEP 157 (232)
T ss_pred --cccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3455578999998754321 1133567889999995 678999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 571 t~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
|+|||+.++..+.++|+++ +.|||++||+++++..+|||+++|++|++.. .|+.++...
T Consensus 158 ~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~-~~~~~~~~~ 220 (232)
T cd03300 158 LGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQ-IGTPEEIYE 220 (232)
T ss_pred cccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEe-cCCHHHHHh
Confidence 9999999999999999764 4699999999999999999999999999974 566665543
No 393
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-39 Score=332.35 Aligned_cols=207 Identities=24% Similarity=0.331 Sum_probs=172.1
Q ss_pred CCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCeeEEEECceecc------
Q 006275 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL------ 489 (652)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~------ 489 (652)
+..+|+++||+++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 10 ~~~~l~i~nl~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~ 89 (269)
T PRK14259 10 KNIIISLQNVTISYGTFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDP 89 (269)
T ss_pred CCceEEEEeEEEEECCEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCH
Confidence 3457999999999998899999999999999999999999999999999999987 68999999997652
Q ss_pred ------cceecccccccCCCCCCHHHHHHHhhhhc-----cHHHHHHHHhhCCCC---hhhhccCcCCCCHHHHHHHHHH
Q 006275 490 ------PNYFEQNQAEALDLDKTVLETVAEAAEDW-----RIDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFC 555 (652)
Q Consensus 490 ------~~~~~~~~~~~~~~~~tv~e~~~~~~~~~-----~~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqrqrv~LA 555 (652)
.+|++|.. .+++ .|+.+|+....... ..+.+.++++.+++. ....++++.+|||||||||+||
T Consensus 90 ~~~~~~i~~v~q~~--~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrl~la 166 (269)
T PRK14259 90 VEVRRRIGMVFQQP--NPFP-KSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECKDKLNESGYSLSGGQQQRLCIA 166 (269)
T ss_pred HHHhhceEEEccCC--ccch-hhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhhhhhCCCcccCCHHHHHHHHHH
Confidence 23444432 3444 59999997643211 123456678887763 2356889999999999999999
Q ss_pred HHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEeC-----------CEEEeec
Q 006275 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKG-----------SNLQDYA 622 (652)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~drvi~l~~-----------g~i~~~~ 622 (652)
|||+.+|++|||||||++||+.++..+.++|+++. .|||+||||++++..+||++++|++ |+++ ..
T Consensus 167 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~~~-~~ 245 (269)
T PRK14259 167 RTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGYLV-EF 245 (269)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccceEE-Ee
Confidence 99999999999999999999999999999998763 5999999999999999999999996 4566 45
Q ss_pred CChhhHhhh
Q 006275 623 GDYNVCFTS 631 (652)
Q Consensus 623 g~~~~~~~~ 631 (652)
|++.+..+.
T Consensus 246 ~~~~~~~~~ 254 (269)
T PRK14259 246 NETKKIFNS 254 (269)
T ss_pred CCHHHHHhC
Confidence 888777653
No 394
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-39 Score=336.34 Aligned_cols=205 Identities=25% Similarity=0.390 Sum_probs=173.1
Q ss_pred cEEEEEeeeeEeCC------eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-------
Q 006275 423 SVVTIKNLEFGYED------RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------- 489 (652)
Q Consensus 423 ~~i~~~~v~~~y~~------~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------- 489 (652)
++|+++|++++|++ +++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 82 (280)
T PRK13633 3 EMIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWD 82 (280)
T ss_pred ceEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHH
Confidence 47999999999963 46999999999999999999999999999999999999999999999997752
Q ss_pred ----cceecccccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHc
Q 006275 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV 559 (652)
Q Consensus 490 ----~~~~~~~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~ 559 (652)
.+|++|+....+ ...++.+|+.+.... .....+.++++.+|+. ...++++.+||||||||++|||||+
T Consensus 83 ~~~~i~~v~q~~~~~~-~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LS~G~~qrv~laral~ 160 (280)
T PRK13633 83 IRNKAGMVFQNPDNQI-VATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMY-EYRRHAPHLLSGGQKQRVAIAGILA 160 (280)
T ss_pred HhhheEEEecChhhhh-ccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCH-hHhhCCcccCCHHHHHHHHHHHHHH
Confidence 124444432122 346899999765321 1124577889999994 6789999999999999999999999
Q ss_pred cCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 560 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++.. |||+++|++|++. ..|+++++...
T Consensus 161 ~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~-~d~v~~l~~G~i~-~~g~~~~~~~~ 234 (280)
T PRK13633 161 MRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVE-ADRIIVMDSGKVV-MEGTPKEIFKE 234 (280)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhc-CCEEEEEECCEEE-EecCHHHHhcC
Confidence 999999999999999999999999999864 4599999999999986 9999999999987 45777776543
No 395
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=5.4e-39 Score=330.23 Aligned_cols=206 Identities=21% Similarity=0.303 Sum_probs=172.8
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCC----CeeEEEECceecc--------cc
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP----RGGEVLLGEHNVL--------PN 491 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p----~~G~i~~~g~~~~--------~~ 491 (652)
+|+++|++++| ++++|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++. .+
T Consensus 4 ~l~~~~l~~~~-~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~ 82 (254)
T PRK10418 4 QIELRNIALQA-AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIA 82 (254)
T ss_pred EEEEeCeEEEe-ccceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEE
Confidence 58999999999 67899999999999999999999999999999999999999 9999999997752 23
Q ss_pred eecccccccCCCCCCHHHHHHHhhh----hccHHHHHHHHhhCCCChh--hhccCcCCCCHHHHHHHHHHHHHccCCCeE
Q 006275 492 YFEQNQAEALDLDKTVLETVAEAAE----DWRIDDIKGLLGRCNFKAD--MLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (652)
Q Consensus 492 ~~~~~~~~~~~~~~tv~e~~~~~~~----~~~~~~~~~~L~~~~l~~~--~~~~~~~~LSgGqrqrv~LAral~~~p~lL 565 (652)
|++|.....+.+..++.+++..... ....+.+.++++.+++... ..++++.+|||||||||+|||||+.+|+||
T Consensus 83 ~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~lL 162 (254)
T PRK10418 83 TIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENAARVLKLYPFEMSGGMLQRMMIALALLCEAPFI 162 (254)
T ss_pred EEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCChhhhhhcCCcccCHHHHHHHHHHHHHhcCCCEE
Confidence 5555432223445688887754211 1223567889999998531 468899999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 566 VLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 566 lLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
||||||++||+.+++.+.+.|+++ +.|||+|||+++++..+|||+++|++|++. ..|+.+++.+.
T Consensus 163 lLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~~~~ 231 (254)
T PRK10418 163 IADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIV-EQGDVETLFNA 231 (254)
T ss_pred EEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEE-EecCHHHHhhC
Confidence 999999999999999999998764 469999999999999999999999999997 46777776543
No 396
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-39 Score=329.98 Aligned_cols=207 Identities=27% Similarity=0.440 Sum_probs=164.5
Q ss_pred eEEEeEEEEeCCe--eeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEEE
Q 006275 98 VKLENISKSYKGV--TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (652)
Q Consensus 98 i~v~~ls~~y~~~--~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~~ 165 (652)
|+++|++++|++. ++++++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4789999999765 79999999999999999999999999999999999999999999998742 24999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh
Q 006275 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (652)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (652)
++|++.++ ..|++||+....... . . ..+...++ ...+.++++.
T Consensus 81 ~~q~~~~~-~~tv~enl~~~~~~~-~-~---~~~~~~~~-------------------------------~~~~~~~~~~ 123 (234)
T cd03251 81 VSQDVFLF-NDTVAENIAYGRPGA-T-R---EEVEEAAR-------------------------------AANAHEFIME 123 (234)
T ss_pred eCCCCeec-cccHHHHhhccCCCC-C-H---HHHHHHHH-------------------------------HcCcHHHHHh
Confidence 99998775 469999985321100 0 0 00000000 0012233444
Q ss_pred c--CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHh
Q 006275 246 L--GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQ 321 (652)
Q Consensus 246 l--gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~ 321 (652)
+ |+. ...++++.+||||||||++|||||+.+|++|||||||+|||+.+++.+.+.|++ .+.|||++||+++++..
T Consensus 124 l~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~ 202 (234)
T cd03251 124 LPEGYD-TVIGERGVKLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIEN 202 (234)
T ss_pred cccCcc-eeeccCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhh
Confidence 4 444 346777899999999999999999999999999999999999999999988753 48899999999999976
Q ss_pred hcCeEEEEcCCeEEEecCChHHH
Q 006275 322 LCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 322 ~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
||+|+++++|++. ..|+.+++
T Consensus 203 -~d~v~~l~~G~i~-~~~~~~~~ 223 (234)
T cd03251 203 -ADRIVVLEDGKIV-ERGTHEEL 223 (234)
T ss_pred -CCEEEEecCCeEe-eeCCHHHH
Confidence 9999999999984 56776554
No 397
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=4.7e-39 Score=329.73 Aligned_cols=200 Identities=28% Similarity=0.448 Sum_probs=168.9
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecccceecccccccCC
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALD 502 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 502 (652)
++|+++||++.|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.+++. ...+|++|+. .+.
T Consensus 3 ~~l~~~~l~~~~~~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~~-~~i~~v~q~~--~~~ 79 (251)
T PRK09544 3 SLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNGK-LRIGYVPQKL--YLD 79 (251)
T ss_pred cEEEEeceEEEECCceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCc-cCEEEecccc--ccc
Confidence 3699999999999888999999999999999999999999999999999999999999999874 2355666653 222
Q ss_pred C--CCCHHHHHHHhhhhccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHH
Q 006275 503 L--DKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 580 (652)
Q Consensus 503 ~--~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~ 580 (652)
. ..++.+++.... .....++.++++.+++. +..++++.+|||||||||+|||||+.+|++|||||||++||+.++.
T Consensus 80 ~~l~~~~~~~~~~~~-~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~ 157 (251)
T PRK09544 80 TTLPLTVNRFLRLRP-GTKKEDILPALKRVQAG-HLIDAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQV 157 (251)
T ss_pred cccChhHHHHHhccc-cccHHHHHHHHHHcCCh-HHHhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHH
Confidence 2 246777764321 12345578889999984 6678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 581 MLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 581 ~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
.+.+.|.++ +.|||+||||++++..+||++++|++ ++. ..|+++++.
T Consensus 158 ~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~-~~g~~~~~~ 208 (251)
T PRK09544 158 ALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HIC-CSGTPEVVS 208 (251)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceE-eeCCHHHHh
Confidence 999998754 56999999999999999999999975 665 457776654
No 398
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-39 Score=328.38 Aligned_cols=203 Identities=26% Similarity=0.393 Sum_probs=170.9
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCeeEEEECceecc--------
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL-------- 489 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~-------- 489 (652)
.+|+++|++++|+++++|+++||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 3 ~~l~~~~l~~~~~~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~ 82 (251)
T PRK14251 3 NIISAKDVHLSYGNYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVE 82 (251)
T ss_pred ceEEEEeeEEEECCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHH
Confidence 36999999999998899999999999999999999999999999999999997 47999999998652
Q ss_pred ----cceecccccccCCCCCCHHHHHHHhhhh-------ccHHHHHHHHhhCCCC---hhhhccCcCCCCHHHHHHHHHH
Q 006275 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED-------WRIDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFC 555 (652)
Q Consensus 490 ----~~~~~~~~~~~~~~~~tv~e~~~~~~~~-------~~~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqrqrv~LA 555 (652)
.+|+.|+ ..++ ..|+.+|+...... .....+.++++.+++. ....++++.+||||||||++||
T Consensus 83 ~~~~i~~~~q~--~~~~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~la 159 (251)
T PRK14251 83 LRKEVGMVFQQ--PTPF-PFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETKDNLDRNAQAFSGGQQQRICIA 159 (251)
T ss_pred hhccEEEEecC--CccC-CCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchHHHhccChhhCCHHHHHHHHHH
Confidence 1234443 2333 47999999764321 1123466788888873 2346789999999999999999
Q ss_pred HHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
|||+.+|++|||||||++||+.+++.+.+.|+++ +.|||+||||++++..+|||+++|++|++.. .|+.++..
T Consensus 160 ral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 234 (251)
T PRK14251 160 RALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIE-AGPTEEMF 234 (251)
T ss_pred HHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEE-eCCHHHHH
Confidence 9999999999999999999999999999999876 4699999999999999999999999999975 47776654
No 399
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-39 Score=328.39 Aligned_cols=205 Identities=25% Similarity=0.346 Sum_probs=172.8
Q ss_pred CcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCC-----CeeEEEECceecc-------
Q 006275 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL------- 489 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~------- 489 (652)
+++|+++|++++|+++.+|+|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.++.
T Consensus 2 ~~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 2 KIKMESKNLNLWYGEKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred ccEEEEEEeEEEECCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 3579999999999888899999999999999999999999999999999999875 7999999998752
Q ss_pred -----cceecccccccCCCCCCHHHHHHHhhhhc---c----HHHHHHHHhhCCCC---hhhhccCcCCCCHHHHHHHHH
Q 006275 490 -----PNYFEQNQAEALDLDKTVLETVAEAAEDW---R----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAF 554 (652)
Q Consensus 490 -----~~~~~~~~~~~~~~~~tv~e~~~~~~~~~---~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqrqrv~L 554 (652)
.+|++|+ ..+++ .|+.+|+.+..... . ...+.++++.+++. ....++++.+||+|||||++|
T Consensus 82 ~~~~~i~~~~q~--~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~l 158 (251)
T PRK14270 82 ELRKRVGMVFQK--PNPFP-MSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDDLKKSALKLSGGQQQRLCI 158 (251)
T ss_pred HHHhheEEEecC--CCcCC-CcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHH
Confidence 1344444 23444 89999997643211 1 23456788888873 235688999999999999999
Q ss_pred HHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+|||+++|++|++.. .|+.++...
T Consensus 159 aral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~~~ 235 (251)
T PRK14270 159 ARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIE-FNKTEKIFL 235 (251)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEE-eCCHHHHhc
Confidence 99999999999999999999999999999999876 3699999999999999999999999999974 577776543
No 400
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-39 Score=329.34 Aligned_cols=207 Identities=27% Similarity=0.385 Sum_probs=173.5
Q ss_pred CCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC--C---CeeEEEECceecc------
Q 006275 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK--P---RGGEVLLGEHNVL------ 489 (652)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~--p---~~G~i~~~g~~~~------ 489 (652)
..++|+++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.++.
T Consensus 9 ~~~~l~i~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 9 KQEVYQINGMNLWYGQHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred CCceEEEeeEEEEECCeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 3557999999999998899999999999999999999999999999999999997 3 5999999998752
Q ss_pred ------cceecccccccCCCCCCHHHHHHHhhhhc---c----HHHHHHHHhhCCCCh---hhhccCcCCCCHHHHHHHH
Q 006275 490 ------PNYFEQNQAEALDLDKTVLETVAEAAEDW---R----IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLA 553 (652)
Q Consensus 490 ------~~~~~~~~~~~~~~~~tv~e~~~~~~~~~---~----~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqrqrv~ 553 (652)
.+|++|+ ..+++ .|+.+|+.+..... . ...+.++++.+++.. +..++++.+||||||||++
T Consensus 89 ~~~~~~i~~v~q~--~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~qrv~ 165 (259)
T PRK14274 89 VELRKNIGMVFQK--GNPFP-QSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTQALSLSGGQQQRLC 165 (259)
T ss_pred HHHhhceEEEecC--Ccccc-cCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHH
Confidence 1244443 23444 49999997643211 1 123566788888742 3468899999999999999
Q ss_pred HHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 554 FCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 554 LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++.++|||+++|++|++.. .|+.+++...
T Consensus 166 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~~ 244 (259)
T PRK14274 166 IARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVE-CNDTNKMFSN 244 (259)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEE-ECCHHHHhhC
Confidence 999999999999999999999999999999999876 3599999999999999999999999999974 5888877543
No 401
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.9e-39 Score=320.42 Aligned_cols=187 Identities=27% Similarity=0.428 Sum_probs=163.1
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceeccc---------ceec
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP---------NYFE 494 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~---------~~~~ 494 (652)
+|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +++.
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~~~~~~~~~~~~ 80 (204)
T PRK13538 1 MLEARNLACERDERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQRDEYHQDLLYLG 80 (204)
T ss_pred CeEEEEEEEEECCEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccchHHhhhheEEeC
Confidence 4889999999998899999999999999999999999999999999999999999999999977521 2333
Q ss_pred ccccccCCCCCCHHHHHHHhhhh---ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCC
Q 006275 495 QNQAEALDLDKTVLETVAEAAED---WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPT 571 (652)
Q Consensus 495 ~~~~~~~~~~~tv~e~~~~~~~~---~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt 571 (652)
+ ...+.+..|+.+|+...... .....+.++++.+|+. +..++++.+||||||||++|||||+.+|++|||||||
T Consensus 81 ~--~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt 157 (204)
T PRK13538 81 H--QPGIKTELTALENLRFYQRLHGPGDDEALWEALAQVGLA-GFEDVPVRQLSAGQQRRVALARLWLTRAPLWILDEPF 157 (204)
T ss_pred C--ccccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcCCH-HHhhCChhhcCHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 3 23456678999999765432 2345678899999994 5678999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEE
Q 006275 572 NHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEV 613 (652)
Q Consensus 572 ~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l 613 (652)
++||+.++..+.++|+++ +.|||+||||++++..+.+|++.+
T Consensus 158 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 158 TAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 999999999999999865 469999999999999877888877
No 402
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=331.36 Aligned_cols=209 Identities=19% Similarity=0.264 Sum_probs=166.1
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCC-----CCcEEEECCCC---------
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN--------- 160 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~i~~~~~~--------- 160 (652)
.++|+++|++++|+++++|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 18 ~~~l~~~nl~~~~~~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~~ 97 (274)
T PRK14265 18 HSVFEVEGVKVFYGGFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINSV 97 (274)
T ss_pred CceEEEeeEEEEeCCeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchhH
Confidence 4579999999999988899999999999999999999999999999999999863 68999988732
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHH
Q 006275 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (652)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (652)
..|+|++|++.++. .|+.+|+....... . .. ...+.
T Consensus 98 ~~~~~i~~v~q~~~l~~-~tv~~nl~~~~~~~-~-----------~~----------------------------~~~~~ 136 (274)
T PRK14265 98 KLRRQVGMVFQRPNPFP-KSIYENIAFAPRAN-G-----------YK----------------------------GNLDE 136 (274)
T ss_pred HHhhcEEEEccCCcccc-ccHHHHHHhHHHhc-C-----------ch----------------------------HHHHH
Confidence 25999999987754 59999985321000 0 00 00011
Q ss_pred HHHHHhhhcCCC---cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 006275 238 KVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (652)
Q Consensus 238 ~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIiv 312 (652)
.+.++++.+++. .+..++++.+|||||||||+|||||+.+|++|||||||+|||+.++..+.++|++ .+.|||++
T Consensus 137 ~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~ 216 (274)
T PRK14265 137 LVEDSLRRAAIWEEVKDKLKEKGTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMV 216 (274)
T ss_pred HHHHHHHHcccchhhHHHhcCCcccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 122233343431 1345678899999999999999999999999999999999999999999988753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEc---------CCeEEEecCChHHHH
Q 006275 313 SHDRAFLDQLCTKIVETE---------MGVSRTYEGNYSQYV 345 (652)
Q Consensus 313 sHd~~~l~~~~d~ii~l~---------~G~~~~~~g~~~~~~ 345 (652)
|||++++..+||++++|+ +|++ ...|+..++.
T Consensus 217 sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~-~~~g~~~~~~ 257 (274)
T PRK14265 217 THNMQQASRVADWTAFFNTEIDEYGKRRGKL-VEFSPTEQMF 257 (274)
T ss_pred eCCHHHHHHhCCEEEEEecccccccccCceE-EEeCCHHHHH
Confidence 999999999999999997 6887 4667766553
No 403
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=332.26 Aligned_cols=207 Identities=27% Similarity=0.403 Sum_probs=173.8
Q ss_pred CCCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCeeEEEECceecc-----
Q 006275 420 SGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL----- 489 (652)
Q Consensus 420 ~~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~----- 489 (652)
.++++|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 35 ~~~~~l~i~~l~~~~~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 35 SGETVIEARDLNVFYGDEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred CCCceEEEEEEEEEECCEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 46678999999999988899999999999999999999999999999999999987 68999999997652
Q ss_pred -------cceecccccccCCCCCCHHHHHHHhhhh-----ccHHHHHHHHhhCCCC---hhhhccCcCCCCHHHHHHHHH
Q 006275 490 -------PNYFEQNQAEALDLDKTVLETVAEAAED-----WRIDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAF 554 (652)
Q Consensus 490 -------~~~~~~~~~~~~~~~~tv~e~~~~~~~~-----~~~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqrqrv~L 554 (652)
.+|++|+. .+++ .|+.+|+...... ....++.++++.+++. .+..++++.+|||||||||+|
T Consensus 115 ~~~~~~~i~~v~q~~--~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LSgGe~qrv~L 191 (285)
T PRK14254 115 PVALRRRIGMVFQKP--NPFP-KSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKDQLDSSGLDLSGGQQQRLCI 191 (285)
T ss_pred hHhhhccEEEEecCC--ccCc-CCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHHHHhCCcccCCHHHHHHHHH
Confidence 13444442 3444 4999999764321 1134577888888874 235688999999999999999
Q ss_pred HHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEE-EEeCCEEEeecCChhhHhh
Q 006275 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVV-EVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi-~l~~g~i~~~~g~~~~~~~ 630 (652)
||||+.+|+||||||||++||+.++..+.++|+++ ..|||+||||++++..+|||++ +|++|++.. .|++++...
T Consensus 192 AraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~-~g~~~~~~~ 269 (285)
T PRK14254 192 ARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVE-FDDTDKIFE 269 (285)
T ss_pred HHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEE-eCCHHHHHh
Confidence 99999999999999999999999999999999876 3599999999999999999975 569999974 577766543
No 404
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-39 Score=321.84 Aligned_cols=189 Identities=31% Similarity=0.419 Sum_probs=163.0
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------------c
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------------P 490 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------------~ 490 (652)
+++ ||+++|+++.+ |+||+|++ |+++|+||||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 2 ~~~-~l~~~~~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 77 (214)
T cd03297 2 LCV-DIEKRLPDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRKI 77 (214)
T ss_pred cee-eeeEecCCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhcE
Confidence 445 89999998766 99999999 999999999999999999999999999999999997642 1
Q ss_pred ceecccccccCCCCCCHHHHHHHhhhh----ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEE
Q 006275 491 NYFEQNQAEALDLDKTVLETVAEAAED----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (652)
Q Consensus 491 ~~~~~~~~~~~~~~~tv~e~~~~~~~~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLl 566 (652)
+|++|. ..+++..|+.+|+...... ....++.++++.+++. ...++++.+||||||||++|||||+.+|++||
T Consensus 78 ~~~~q~--~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~lll 154 (214)
T cd03297 78 GLVFQQ--YALFPHLNVRENLAFGLKRKRNREDRISVDELLDLLGLD-HLLNRYPAQLSGGEKQRVALARALAAQPELLL 154 (214)
T ss_pred EEEecC--CccCCCCCHHHHHHHHHhhCCHHHHHHHHHHHHHHcCCH-hHhhcCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 234433 3456678999998764321 1234577899999995 56789999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEe
Q 006275 567 LDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (652)
Q Consensus 567 LDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~ 620 (652)
|||||+|||+.+++.+.++|+++ +.|||++|||++++..+||++++|++|++..
T Consensus 155 lDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 212 (214)
T cd03297 155 LDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQY 212 (214)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEe
Confidence 99999999999999999998764 4699999999999999999999999999863
No 405
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-39 Score=332.29 Aligned_cols=202 Identities=26% Similarity=0.364 Sum_probs=171.9
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCC--------eeEEEECceecc------
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR--------GGEVLLGEHNVL------ 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~--------~G~i~~~g~~~~------ 489 (652)
+|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++.
T Consensus 1 ml~~~nl~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (272)
T PRK13547 1 MLTADHLHVARRHRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPR 80 (272)
T ss_pred CeEEEEEEEEECCEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHH
Confidence 489999999999889999999999999999999999999999999999999998 999999997652
Q ss_pred ----cceecccccccCCCCCCHHHHHHHhhhh----------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHH
Q 006275 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED----------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFC 555 (652)
Q Consensus 490 ----~~~~~~~~~~~~~~~~tv~e~~~~~~~~----------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LA 555 (652)
.+|++|.. ...+..|+.+|+...... .....+.++++.+++. ...++++.+|||||||||+||
T Consensus 81 ~~~~~~~v~q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la 157 (272)
T PRK13547 81 LARLRAVLPQAA--QPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGAT-ALVGRDVTTLSGGELARVQFA 157 (272)
T ss_pred HHhhcEEecccC--CCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcH-hhhcCCcccCCHHHHHHHHHH
Confidence 13444432 234568999999764210 1123467889999995 567899999999999999999
Q ss_pred HHHc---------cCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeec
Q 006275 556 KFMV---------KPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYA 622 (652)
Q Consensus 556 ral~---------~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~ 622 (652)
|||+ .+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++||++++|++|++.. .
T Consensus 158 ral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~-~ 236 (272)
T PRK13547 158 RVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVA-H 236 (272)
T ss_pred HHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEE-e
Confidence 9999 599999999999999999999999999764 4699999999999999999999999999974 5
Q ss_pred CChhhHh
Q 006275 623 GDYNVCF 629 (652)
Q Consensus 623 g~~~~~~ 629 (652)
|+.++..
T Consensus 237 g~~~~~~ 243 (272)
T PRK13547 237 GAPADVL 243 (272)
T ss_pred cCHHHHc
Confidence 7766553
No 406
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-39 Score=328.29 Aligned_cols=209 Identities=26% Similarity=0.392 Sum_probs=163.6
Q ss_pred ceEEEeEEEEeCC-eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEEE
Q 006275 97 GVKLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (652)
Q Consensus 97 ~i~v~~ls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~~ 165 (652)
.|+++|++++|++ +++++|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|
T Consensus 2 ~l~~~~l~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 81 (229)
T cd03254 2 EIEFENVNFSYDEKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMIGV 81 (229)
T ss_pred eEEEEEEEEecCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhEEE
Confidence 3899999999975 469999999999999999999999999999999999999999999998742 25999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh
Q 006275 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (652)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (652)
++|++.++. .|++||+....... . ...+...++. ..+.+.++.
T Consensus 82 ~~q~~~~~~-~tv~~~~~~~~~~~-~----~~~~~~~~~~-------------------------------~~l~~~~~~ 124 (229)
T cd03254 82 VLQDTFLFS-GTIMENIRLGRPNA-T----DEEVIEAAKE-------------------------------AGAHDFIMK 124 (229)
T ss_pred ecCCchhhh-hHHHHHHhccCCCC-C----HHHHHHHHHH-------------------------------hChHHHHHh
Confidence 999987755 49999985321100 0 0000000000 011122333
Q ss_pred c--CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHh
Q 006275 246 L--GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQ 321 (652)
Q Consensus 246 l--gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~ 321 (652)
+ |+. ...++.+.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|++ .+.|||+|||+++++.
T Consensus 125 ~~~~~~-~~~~~~~~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~- 202 (229)
T cd03254 125 LPNGYD-TVLGENGGNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIK- 202 (229)
T ss_pred Cccccc-CHhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHh-
Confidence 2 443 235667899999999999999999999999999999999999999999888753 4789999999999996
Q ss_pred hcCeEEEEcCCeEEEecCChHHHH
Q 006275 322 LCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 322 ~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
.||++++|++|++. +.|+++++.
T Consensus 203 ~~d~i~~l~~g~~~-~~~~~~~~~ 225 (229)
T cd03254 203 NADKILVLDDGKII-EEGTHDELL 225 (229)
T ss_pred hCCEEEEEeCCeEE-EeCCHHHHH
Confidence 59999999999984 567765543
No 407
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-39 Score=327.62 Aligned_cols=203 Identities=26% Similarity=0.361 Sum_probs=171.8
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC---CCeeEEEECceecc----------c
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK---PRGGEVLLGEHNVL----------P 490 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~---p~~G~i~~~g~~~~----------~ 490 (652)
+++++|+++.|+++.+|+++||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++. .
T Consensus 2 ~~~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i 81 (246)
T PRK14269 2 IAKTTNLNLFYGKKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNV 81 (246)
T ss_pred ceeeeeeEEEECCEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhE
Confidence 4889999999998899999999999999999999999999999999999984 79999999998763 2
Q ss_pred ceecccccccCCCCCCHHHHHHHhhhh--------ccHHHHHHHHhhCCCCh---hhhccCcCCCCHHHHHHHHHHHHHc
Q 006275 491 NYFEQNQAEALDLDKTVLETVAEAAED--------WRIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCKFMV 559 (652)
Q Consensus 491 ~~~~~~~~~~~~~~~tv~e~~~~~~~~--------~~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqrqrv~LAral~ 559 (652)
+|++|. ..+++ .|+.+|+...... ....++.++++.+++.. +..++++.+||||||||++|||||+
T Consensus 82 ~~~~q~--~~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~ 158 (246)
T PRK14269 82 GMVFQQ--PNVFV-KSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARALA 158 (246)
T ss_pred EEEecC--Ccccc-ccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHHhcCCcccCCHHHHHHHHHHHHHh
Confidence 345544 33443 6999999764211 11234678899999852 3467889999999999999999999
Q ss_pred cCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 560 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++. .|+.++...
T Consensus 159 ~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~ 230 (246)
T PRK14269 159 IKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIE-FGESKEFFE 230 (246)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEE-ECCHHHHHh
Confidence 999999999999999999999999999865 5699999999999999999999999999984 477666543
No 408
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-39 Score=312.11 Aligned_cols=160 Identities=36% Similarity=0.580 Sum_probs=145.8
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------ceEEEEec
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLSQ 168 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------~~i~~v~Q 168 (652)
++++|++++|++.++|+++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.. ..++|++|
T Consensus 1 l~~~~l~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 80 (173)
T cd03230 1 IEVRNLSKRYGKKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEPEEVKRRIGYLPE 80 (173)
T ss_pred CEEEEEEEEECCeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccchHhhhccEEEEec
Confidence 478999999988889999999999999999999999999999999999999999999998742 35999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCC
Q 006275 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (652)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (652)
++.+++..|+.||+
T Consensus 81 ~~~~~~~~tv~~~~------------------------------------------------------------------ 94 (173)
T cd03230 81 EPSLYENLTVRENL------------------------------------------------------------------ 94 (173)
T ss_pred CCccccCCcHHHHh------------------------------------------------------------------
Confidence 98876667877663
Q ss_pred CcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcCe
Q 006275 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCTK 325 (652)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~~d~ 325 (652)
. |||||+||++|||||+.+|++|||||||++||+.++.++.++|++ .|.|+|++||+.+++..+||+
T Consensus 95 --~--------LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~ 164 (173)
T cd03230 95 --K--------LSGGMKQRLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDR 164 (173)
T ss_pred --h--------cCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCE
Confidence 0 899999999999999999999999999999999999999888743 478999999999999999999
Q ss_pred EEEEcCCe
Q 006275 326 IVETEMGV 333 (652)
Q Consensus 326 ii~l~~G~ 333 (652)
++++++|+
T Consensus 165 i~~l~~g~ 172 (173)
T cd03230 165 VAILNNGR 172 (173)
T ss_pred EEEEeCCC
Confidence 99999885
No 409
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.3e-39 Score=316.77 Aligned_cols=204 Identities=25% Similarity=0.391 Sum_probs=182.5
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc------cceecccc
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------PNYFEQNQ 497 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------~~~~~~~~ 497 (652)
++++++|+++|+++.+++|+||.+++|++.|++|||||||||++|+|+|+++|++|+|.++|.++. .+|.+..
T Consensus 2 ~L~ie~vtK~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~~G~I~~~g~~~~~~~~~rIGyLPEE- 80 (300)
T COG4152 2 ALEIEGVTKSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPTEGEITWNGGPLSQEIKNRIGYLPEE- 80 (300)
T ss_pred ceEEecchhccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCccCceEEEcCcchhhhhhhhcccChhh-
Confidence 489999999999999999999999999999999999999999999999999999999999998763 4666643
Q ss_pred cccCCCCCCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCC
Q 006275 498 AEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPT 571 (652)
Q Consensus 498 ~~~~~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt 571 (652)
..+.+.+||.|.+.+.+... ...++..+|+++++. ....+++.+||-|++|++.+..+++++|+++|||||+
T Consensus 81 -RGLy~k~tv~dql~yla~LkGm~~~e~~~~~~~wLer~~i~-~~~~~kIk~LSKGnqQKIQfisaviHePeLlILDEPF 158 (300)
T COG4152 81 -RGLYPKMTVEDQLKYLAELKGMPKAEIQKKLQAWLERLEIV-GKKTKKIKELSKGNQQKIQFISAVIHEPELLILDEPF 158 (300)
T ss_pred -hccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcccc-ccccchHHHhhhhhhHHHHHHHHHhcCCCEEEecCCc
Confidence 46889999999998865432 234578899999995 5678999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 572 NHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 572 ~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
|||||.+.+.+.+.+.++ +.|||++||.|+-++++||+++.|++|+.+ .+|+...+-.+
T Consensus 159 SGLDPVN~elLk~~I~~lk~~GatIifSsH~Me~vEeLCD~llmL~kG~~V-~~G~v~~ir~~ 220 (300)
T COG4152 159 SGLDPVNVELLKDAIFELKEEGATIIFSSHRMEHVEELCDRLLMLKKGQTV-LYGTVEDIRRS 220 (300)
T ss_pred cCCChhhHHHHHHHHHHHHhcCCEEEEecchHHHHHHHhhhhheecCCceE-EeccHHHHHHh
Confidence 999999999999999865 469999999999999999999999999987 56888876553
No 410
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=329.28 Aligned_cols=210 Identities=22% Similarity=0.330 Sum_probs=166.9
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCC-----CCcEEEECCCC---------
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN--------- 160 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~i~~~~~~--------- 160 (652)
...|+++|++++|+++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 14 ~~~l~~~~l~~~~~~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~~~~ 93 (265)
T PRK14252 14 QQKSEVNKLNFYYGGYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSPEVD 93 (265)
T ss_pred CceEEEEEEEEEECCeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccccccC
Confidence 4569999999999988899999999999999999999999999999999999875 79999987532
Q ss_pred -----ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcH
Q 006275 161 -----MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTL 235 (652)
Q Consensus 161 -----~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (652)
..++|++|++.++.. |++||+...+... .. . .....
T Consensus 94 ~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~-~~-----------~--------------------------~~~~~ 134 (265)
T PRK14252 94 PIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIR-GV-----------K--------------------------RRSIL 134 (265)
T ss_pred HHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHc-CC-----------C--------------------------hHHHH
Confidence 249999999887664 9999985322100 00 0 00001
Q ss_pred HHHHHHHhhhcCCC---cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEE
Q 006275 236 DAKVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMV 310 (652)
Q Consensus 236 ~~~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvI 310 (652)
++.+.++++.+++. .+..++.+.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|++ .+.|||
T Consensus 135 ~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tii 214 (265)
T PRK14252 135 EERVENALRNAALWDEVKDRLGDLAFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTIL 214 (265)
T ss_pred HHHHHHHHHHcCCchhhhHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEE
Confidence 12233334444432 1345677899999999999999999999999999999999999999999888753 368999
Q ss_pred EEecCHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 311 IISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 311 ivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
+|||+++++..+||+++++++|++. ..|+.+++
T Consensus 215 ivth~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 247 (265)
T PRK14252 215 IVTHNMQQAARVSDYTAYMYMGELI-EFGATDTI 247 (265)
T ss_pred EEecCHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 9999999999999999999999985 55665543
No 411
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=327.27 Aligned_cols=208 Identities=19% Similarity=0.323 Sum_probs=168.7
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC-----CCCcEEEECCCC-----------
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN----------- 160 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~i~~~~~~----------- 160 (652)
.|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+.+ |++|+|.++|.+
T Consensus 3 ~l~~~~v~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~ 82 (250)
T PRK14266 3 RIEVENLNTYFDDAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVVEL 82 (250)
T ss_pred EEEEEeEEEEeCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHHHH
Confidence 4899999999998889999999999999999999999999999999999864 489999998743
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHH
Q 006275 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (652)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (652)
..++|++|++.++. .|+.+|+...+... . ..+....++++
T Consensus 83 ~~~i~~~~q~~~~~~-~t~~~nl~~~~~~~--------------~------------------------~~~~~~~~~~~ 123 (250)
T PRK14266 83 RKKVGMVFQKPNPFP-KSIFDNVAYGLRIH--------------G------------------------EDDEDFIEERV 123 (250)
T ss_pred hhheEEEecCCccCc-chHHHHHHhHHhhc--------------C------------------------CCCHHHHHHHH
Confidence 24999999988765 59999985322100 0 00000112334
Q ss_pred HHHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 006275 240 SKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (652)
Q Consensus 240 ~~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsH 314 (652)
.++++.+|+.. ...++++.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|++ .+.|||++||
T Consensus 124 ~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh 203 (250)
T PRK14266 124 EESLKAAALWDEVKDKLDKSALGLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTH 203 (250)
T ss_pred HHHHHHcCCchhHHHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEC
Confidence 45555555531 245778899999999999999999999999999999999999999999988753 4789999999
Q ss_pred CHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 315 d~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
+++++..+||+++++++|++. +.|+.+++
T Consensus 204 ~~~~~~~~~~~i~~l~~G~i~-~~g~~~~~ 232 (250)
T PRK14266 204 NMQQATRVSKYTSFFLNGEII-ESGLTDQI 232 (250)
T ss_pred CHHHHHhhcCEEEEEECCeEE-EeCCHHHH
Confidence 999999999999999999884 66776655
No 412
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=5.1e-39 Score=368.54 Aligned_cols=210 Identities=26% Similarity=0.415 Sum_probs=168.0
Q ss_pred ceEEEeEEEEe-CCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCc----------eEEE
Q 006275 97 GVKLENISKSY-KGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM----------KIAF 165 (652)
Q Consensus 97 ~i~v~~ls~~y-~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~----------~i~~ 165 (652)
.|+++|++|.| +++++|+|+||+|++|+++|||||||||||||+++|+|++ |++|+|.++|.+. .|+|
T Consensus 349 ~i~~~~vsf~~~~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~ 427 (588)
T PRK11174 349 TIEAEDLEILSPDGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSLKINGIELRELDPESWRKHLSW 427 (588)
T ss_pred eEEEEeeEEeccCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEE
Confidence 49999999766 5567999999999999999999999999999999999999 9999999998542 6999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh
Q 006275 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (652)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (652)
|+|+|++ ++.|++||+..+-.+ .. -+++.++++.++ +. +.+..
T Consensus 428 v~Q~~~L-F~~TI~eNI~~g~~~-~~----~eei~~al~~a~---------------------------l~----~~i~~ 470 (588)
T PRK11174 428 VGQNPQL-PHGTLRDNVLLGNPD-AS----DEQLQQALENAW---------------------------VS----EFLPL 470 (588)
T ss_pred ecCCCcC-CCcCHHHHhhcCCCC-CC----HHHHHHHHHHhC---------------------------HH----HHHHh
Confidence 9999987 678999999743111 00 012222222111 11 11222
Q ss_pred c--CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHh
Q 006275 246 L--GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQ 321 (652)
Q Consensus 246 l--gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~ 321 (652)
+ |+.+..+++ ..+||||||||++|||||+++|+|||||||||+||+++.+.+.+.|++ .++|+|+|||+++.+.
T Consensus 471 lp~G~dT~vge~-G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~- 548 (588)
T PRK11174 471 LPQGLDTPIGDQ-AAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLA- 548 (588)
T ss_pred cccccccccccC-CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHH-
Confidence 2 554444333 688999999999999999999999999999999999999999887754 4799999999999985
Q ss_pred hcCeEEEEcCCeEEEecCChHHHHHH
Q 006275 322 LCTKIVETEMGVSRTYEGNYSQYVLE 347 (652)
Q Consensus 322 ~~d~ii~l~~G~~~~~~g~~~~~~~~ 347 (652)
.||+|+++++|++ ...|+++++...
T Consensus 549 ~aD~Iivl~~G~i-~e~G~~~eL~~~ 573 (588)
T PRK11174 549 QWDQIWVMQDGQI-VQQGDYAELSQA 573 (588)
T ss_pred hCCEEEEEeCCeE-eecCCHHHHHhc
Confidence 5999999999998 578998887654
No 413
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=9e-39 Score=319.96 Aligned_cols=191 Identities=27% Similarity=0.450 Sum_probs=165.2
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------cceeccc
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQN 496 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~~~ 496 (652)
++++||++.|+. ++.++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|+
T Consensus 1 ~~~~~l~~~~~~--~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q~ 78 (213)
T TIGR01277 1 LALDKVRYEYEH--LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLAPYQRPVSMLFQE 78 (213)
T ss_pred CeEEeeeEEeCC--cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCChhccceEEEecc
Confidence 468999999974 578999999999999999999999999999999999999999999998752 2344444
Q ss_pred ccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCC
Q 006275 497 QAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (652)
Q Consensus 497 ~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEP 570 (652)
..+++..|+.+|+...... ....++.++++.+++. +..++.+.+||||||||++|||||+.+|++||||||
T Consensus 79 --~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP 155 (213)
T TIGR01277 79 --NNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIA-DYLDRLPEQLSGGQRQRVALARCLVRPNPILLLDEP 155 (213)
T ss_pred --CccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcH-HHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3466678999999754211 1234567889999994 678999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEe
Q 006275 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (652)
Q Consensus 571 t~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~ 620 (652)
|++||+.++..+.++|.++ +.|||+|||+++++..+||++++|++|++..
T Consensus 156 t~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 156 FSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred CccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 9999999999999998764 4599999999999999999999999999974
No 414
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=5.1e-39 Score=324.45 Aligned_cols=194 Identities=27% Similarity=0.442 Sum_probs=165.1
Q ss_pred CcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------cc
Q 006275 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PN 491 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~ 491 (652)
.++|+++|+++.|+++++++++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 5 ~~~i~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 5 SPLLQLQNVGYLAGDAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred CceEEEeccEEeeCCceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 34799999999999889999999999999999999999999999999999999999999999997652 23
Q ss_pred eecccccccCCCCCCHHHHHHHhhh----hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEE
Q 006275 492 YFEQNQAEALDLDKTVLETVAEAAE----DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (652)
Q Consensus 492 ~~~~~~~~~~~~~~tv~e~~~~~~~----~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlL 567 (652)
|++|. ..++ ..|+.+|+..... ......+.++++.+++.....++++.+|||||||||+|||||+.+|++|||
T Consensus 85 ~~~q~--~~l~-~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~llll 161 (225)
T PRK10247 85 YCAQT--PTLF-GDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPDTILTKNIAELSGGEKQRISLIRNLQFMPKVLLL 161 (225)
T ss_pred EEecc--cccc-cccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 44444 2344 4599999875321 112345678999999964567899999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEe--CCEEE
Q 006275 568 DEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVK--GSNLQ 619 (652)
Q Consensus 568 DEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~--~g~i~ 619 (652)
||||++||+.+++.+.++|+++ +.|||++|||++++. .||++++|+ .|++.
T Consensus 162 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~-~~d~i~~l~~~~~~~~ 218 (225)
T PRK10247 162 DEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEIN-HADKVITLQPHAGEMQ 218 (225)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHH-hCCEEEEEecccchHh
Confidence 9999999999999999988864 459999999999996 599999996 56654
No 415
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=3.9e-39 Score=325.11 Aligned_cols=191 Identities=25% Similarity=0.324 Sum_probs=165.4
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecccceecccccccCCCC
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLD 504 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~~ 504 (652)
+.+++++++|+++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. . + ....+.+.
T Consensus 23 l~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~--~-~-~~~~~~~~ 98 (224)
T cd03220 23 LGILGRKGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRVSSL--L-G-LGGGFNPE 98 (224)
T ss_pred hhhhhhhhhcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEchh--h-c-ccccCCCC
Confidence 789999999999999999999999999999999999999999999999999999999999976421 1 1 11234567
Q ss_pred CCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHH
Q 006275 505 KTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPS 578 (652)
Q Consensus 505 ~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~ 578 (652)
.|+.+|+....... ....+.++++.+++. +..++++.+||||||||++|||||+.+|++|||||||++||+.+
T Consensus 99 ~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEP~~gLD~~~ 177 (224)
T cd03220 99 LTGRENIYLNGRLLGLSRKEIDEKIDEIIEFSELG-DFIDLPVKTYSSGMKARLAFAIATALEPDILLIDEVLAVGDAAF 177 (224)
T ss_pred CcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHH
Confidence 89999987643211 123466788888984 66789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEe
Q 006275 579 KEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (652)
Q Consensus 579 ~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~ 620 (652)
+..+.++|.++ +.|||+||||++++..+||++++|++|++..
T Consensus 178 ~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 222 (224)
T cd03220 178 QEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRF 222 (224)
T ss_pred HHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999998765 4699999999999999999999999999863
No 416
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=7.8e-39 Score=360.36 Aligned_cols=204 Identities=23% Similarity=0.334 Sum_probs=177.9
Q ss_pred CcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-----------c
Q 006275 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------P 490 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~ 490 (652)
.++|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 9 ~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 9 PPLLCARSISKQYSGVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred CceEEEEeEEEEeCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 45799999999999888999999999999999999999999999999999999999999999997652 2
Q ss_pred ceecccccccCCCCCCHHHHHHHhhhhc--cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEe
Q 006275 491 NYFEQNQAEALDLDKTVLETVAEAAEDW--RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLD 568 (652)
Q Consensus 491 ~~~~~~~~~~~~~~~tv~e~~~~~~~~~--~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLD 568 (652)
+|++|+ ..+++..|+.+|+.+..... ..+.+.++++.+++. ...++++.+|||||||||+|||||+.+|+|||||
T Consensus 89 ~~v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la~aL~~~p~lllLD 165 (510)
T PRK15439 89 YLVPQE--PLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQ-LDLDSSAGSLEVADRQIVEILRGLMRDSRILILD 165 (510)
T ss_pred EEEecc--CccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCC-ccccCChhhCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 345554 34667889999998653221 234577899999995 5679999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 569 EPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 569 EPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
|||++||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|++. +.|+++++.
T Consensus 166 EPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 228 (510)
T PRK15439 166 EPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIA-LSGKTADLS 228 (510)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EecChHHcC
Confidence 999999999999999998765 469999999999999999999999999997 467777653
No 417
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=3.9e-39 Score=325.03 Aligned_cols=196 Identities=30% Similarity=0.390 Sum_probs=162.1
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccCccCCCCC
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRT 177 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~~~~~~~T 177 (652)
+.+++++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. +.+..+...+.+..|
T Consensus 23 l~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~--~~~~~~~~~~~~~~t 100 (224)
T cd03220 23 LGILGRKGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRV--SSLLGLGGGFNPELT 100 (224)
T ss_pred hhhhhhhhhcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEE--chhhcccccCCCCCc
Confidence 788999999999999999999999999999999999999999999999999999999998753 222233344556789
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccccCCC
Q 006275 178 VREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLV 257 (652)
Q Consensus 178 v~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~ 257 (652)
|.||+...... . .........++.++++.+|+. +..++++
T Consensus 101 v~enl~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~~l~-~~~~~~~ 140 (224)
T cd03220 101 GRENIYLNGRL---------------L------------------------GLSRKEIDEKIDEIIEFSELG-DFIDLPV 140 (224)
T ss_pred HHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHHHHHcCCh-hhhhCCh
Confidence 99997522100 0 000011223455677788885 5678889
Q ss_pred CCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCeEEEEcCCeE
Q 006275 258 ASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTKIVETEMGVS 334 (652)
Q Consensus 258 ~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~d~ii~l~~G~~ 334 (652)
.+||||||||++|||||+.+|++|||||||+|||+.+++.+.++|+ +.++|||+|||+++++..+||+++++++|++
T Consensus 141 ~~LSgG~~qrv~laral~~~p~llllDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i 220 (224)
T cd03220 141 KTYSSGMKARLAFAIATALEPDILLIDEVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKI 220 (224)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999888764 3478999999999999999999999999987
Q ss_pred E
Q 006275 335 R 335 (652)
Q Consensus 335 ~ 335 (652)
.
T Consensus 221 ~ 221 (224)
T cd03220 221 R 221 (224)
T ss_pred E
Confidence 4
No 418
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.5e-39 Score=345.98 Aligned_cols=201 Identities=23% Similarity=0.457 Sum_probs=177.4
Q ss_pred EEEEEeeeeEeCCee-eeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------cce
Q 006275 424 VVTIKNLEFGYEDRL-LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNY 492 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~-vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~ 492 (652)
.|+++||+++|++++ +|+++||+|++||++||+|+|||||||++|+|.++++ .+|+|.+||.++. .++
T Consensus 351 ~I~F~dV~f~y~~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~ 429 (591)
T KOG0057|consen 351 SIEFDDVHFSYGPKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGV 429 (591)
T ss_pred cEEEEeeEEEeCCCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeE
Confidence 499999999999776 9999999999999999999999999999999999999 9999999999873 356
Q ss_pred ecccccccCCCCCCHHHHHHHhhhhccHHHHHHHHhhCCCChhh----------hccCcCCCCHHHHHHHHHHHHHccCC
Q 006275 493 FEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADM----------LDRKVSLLSGGEKARLAFCKFMVKPS 562 (652)
Q Consensus 493 ~~~~~~~~~~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~----------~~~~~~~LSgGqrqrv~LAral~~~p 562 (652)
++|+ ...++.|+..|+.++......+++.+..+++++.... ...+...|||||||||+||||++++|
T Consensus 430 VPQd---~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda 506 (591)
T KOG0057|consen 430 VPQD---SVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDA 506 (591)
T ss_pred eCCc---ccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCC
Confidence 6654 3457899999999998888888899999999885321 22344589999999999999999999
Q ss_pred CeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 563 TLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 563 ~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
+|++||||||+||.++++.+.+.|.+. ++|+|+|.||++++.+ ||+|+++++|++.++ |+.++.+.
T Consensus 507 ~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~-~DkI~~l~nG~v~e~-gth~ell~ 574 (591)
T KOG0057|consen 507 PILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKD-FDKIIVLDNGTVKEY-GTHSELLA 574 (591)
T ss_pred CeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhc-CCEEEEEECCeeEEe-ccHHHHhh
Confidence 999999999999999999999999863 4699999999999987 999999999999864 88887766
No 419
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=7e-39 Score=361.95 Aligned_cols=209 Identities=31% Similarity=0.458 Sum_probs=174.2
Q ss_pred CCceEEEeEEEEeCC-----eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEEC-CC---------
Q 006275 95 SSGVKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKA-KS--------- 159 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~-~~--------- 159 (652)
.++|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++ |.
T Consensus 277 ~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~ 356 (520)
T TIGR03269 277 EPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPG 356 (520)
T ss_pred CceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccc
Confidence 457999999999952 469999999999999999999999999999999999999999999984 31
Q ss_pred -------CceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCCh
Q 006275 160 -------NMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNL 232 (652)
Q Consensus 160 -------~~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (652)
..+|+|++|++.+++..||.+|+...+. +. ...
T Consensus 357 ~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~---------------~~-------------------------~~~ 396 (520)
T TIGR03269 357 PDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIG---------------LE-------------------------LPD 396 (520)
T ss_pred hhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHH---------------cC-------------------------CCH
Confidence 1249999999887778899999853210 00 000
Q ss_pred hcHHHHHHHHhhhcCCCc----ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----c
Q 006275 233 DTLDAKVSKLMPELGFTA----DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----K 304 (652)
Q Consensus 233 ~~~~~~i~~ll~~lgl~~----~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~ 304 (652)
.....++.++++.+|+.. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++.+.++|+ +
T Consensus 397 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~ 476 (520)
T TIGR03269 397 ELARMKAVITLKMVGFDEEKAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREE 476 (520)
T ss_pred HHHHHHHHHHHHhCCCCCccchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHH
Confidence 012335567788889863 25688999999999999999999999999999999999999999999998873 3
Q ss_pred CCCeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHH
Q 006275 305 QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 305 ~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
.|.|||+||||++++.++||+|++|++|++. +.|+.+++
T Consensus 477 ~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 515 (520)
T TIGR03269 477 MEQTFIIVSHDMDFVLDVCDRAALMRDGKIV-KIGDPEEI 515 (520)
T ss_pred cCcEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHHHH
Confidence 5899999999999999999999999999974 55765543
No 420
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-39 Score=331.99 Aligned_cols=204 Identities=27% Similarity=0.434 Sum_probs=172.0
Q ss_pred CcEEEEEeeeeEeC--CeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------
Q 006275 422 RSVVTIKNLEFGYE--DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (652)
Q Consensus 422 ~~~i~~~~v~~~y~--~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------- 489 (652)
+++|+++|+++.|+ ++++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 5 ~~~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 84 (271)
T PRK13632 5 SVMIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKK 84 (271)
T ss_pred ceEEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcc
Confidence 34799999999995 468999999999999999999999999999999999999999999999998753
Q ss_pred cceecccccccCCCCCCHHHHHHHhhhh--cc----HHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCC
Q 006275 490 PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (652)
Q Consensus 490 ~~~~~~~~~~~~~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~ 563 (652)
.+|++|+.. ..++..|+.+|+...... .. ...+.++++.+++. +..++++.+||||||||++|||||+.+|+
T Consensus 85 i~~v~q~~~-~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~ 162 (271)
T PRK13632 85 IGIIFQNPD-NQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGME-DYLDKEPQNLSGGQKQRVAIASVLALNPE 162 (271)
T ss_pred eEEEEeCHH-HhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCH-HHhhCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 134444421 234568999999764321 11 22467889999994 67899999999999999999999999999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 564 LLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 564 lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
+|||||||+|||+.+++.+.++|+++ +.|||++|||++++. .||++++|++|++.. .|+.++..
T Consensus 163 lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~-~g~~~~~~ 230 (271)
T PRK13632 163 IIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAI-LADKVIVFSEGKLIA-QGKPKEIL 230 (271)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHh-hCCEEEEEECCEEEE-ecCHHHHh
Confidence 99999999999999999999999865 259999999999996 799999999999974 46666543
No 421
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.2e-38 Score=324.18 Aligned_cols=201 Identities=27% Similarity=0.428 Sum_probs=173.5
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceeccc--------ceeccc
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP--------NYFEQN 496 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~--------~~~~~~ 496 (652)
|+++|++++|+++.+|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +|.+|.
T Consensus 1 i~i~~l~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~~~~~i~~~~q~ 80 (237)
T TIGR00968 1 IEIANISKRFGSFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHARDRKIGFVFQH 80 (237)
T ss_pred CEEEEEEEEECCeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcCEEEEecC
Confidence 478999999998899999999999999999999999999999999999999999999999987521 234433
Q ss_pred ccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCC
Q 006275 497 QAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (652)
Q Consensus 497 ~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEP 570 (652)
..+++..|+.+|+...... .....+.++++.+++. ...++.+.+||+||+||++|||||+.+|+++|||||
T Consensus 81 --~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~lS~G~~qrl~laral~~~p~llllDEP 157 (237)
T TIGR00968 81 --YALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLE-GLGDRYPNQLSGGQRQRVALARALAVEPQVLLLDEP 157 (237)
T ss_pred --hhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCH-hHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3455678999999764321 1134567889999994 678999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 571 t~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
|++||+.+++.+.++|.+. +.|||++||+++++..+||++++|++|++.+ .|+.++..
T Consensus 158 ~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~-~~~~~~~~ 219 (237)
T TIGR00968 158 FGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQ-IGSPDEVY 219 (237)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEE-ecCHHHHH
Confidence 9999999999999999864 4699999999999999999999999999974 46666654
No 422
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=5.7e-39 Score=308.86 Aligned_cols=163 Identities=25% Similarity=0.429 Sum_probs=147.3
Q ss_pred eEEEeEEEEeCC-eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccCccCCCC
Q 006275 98 VKLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSR 176 (652)
Q Consensus 98 i~v~~ls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~~~~~~~ 176 (652)
|+++|++++|++ +++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.+++. ..++|++|++.+ +..
T Consensus 1 i~~~~~~~~~~~~~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-~~i~~~~q~~~~-~~~ 78 (166)
T cd03223 1 IELENLSLATPDGRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-EDLLFLPQRPYL-PLG 78 (166)
T ss_pred CEEEEEEEEcCCCCeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-ceEEEECCCCcc-ccc
Confidence 478999999964 57999999999999999999999999999999999999999999999864 579999999875 467
Q ss_pred CHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccccCC
Q 006275 177 TVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRL 256 (652)
Q Consensus 177 Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~ 256 (652)
|+.||+.. + .
T Consensus 79 tv~~nl~~--------------------------------------------------------------~--------~ 88 (166)
T cd03223 79 TLREQLIY--------------------------------------------------------------P--------W 88 (166)
T ss_pred cHHHHhhc--------------------------------------------------------------c--------C
Confidence 89888630 0 2
Q ss_pred CCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcCCe
Q 006275 257 VASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGV 333 (652)
Q Consensus 257 ~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~ii~l~~G~ 333 (652)
+.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++.+.|+|++||+.++. .+||+++++++++
T Consensus 89 ~~~LS~G~~~rv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~tiiivsh~~~~~-~~~d~i~~l~~~~ 164 (166)
T cd03223 89 DDVLSGGEQQRLAFARLLLHKPKFVFLDEATSALDEESEDRLYQLLKELGITVISVGHRPSLW-KFHDRVLDLDGEG 164 (166)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEECCccccCHHHHHHHHHHHHHhCCEEEEEeCChhHH-hhCCEEEEEcCCC
Confidence 578999999999999999999999999999999999999999999988789999999999876 6999999998875
No 423
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-39 Score=332.25 Aligned_cols=202 Identities=20% Similarity=0.347 Sum_probs=166.6
Q ss_pred EEEEEeeeeEeC-CeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-------cceecc
Q 006275 424 VVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------PNYFEQ 495 (652)
Q Consensus 424 ~i~~~~v~~~y~-~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------~~~~~~ 495 (652)
+|+++|++++|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|
T Consensus 6 ~l~~~~l~~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~i~~v~q 85 (272)
T PRK15056 6 GIVVNDVTVTWRNGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQALQKNLVAYVPQ 85 (272)
T ss_pred eEEEEeEEEEecCCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHHhhccceEEEecc
Confidence 599999999996 578999999999999999999999999999999999999999999999997652 234555
Q ss_pred cccccCCCCCCHHHHHHHhhh----------hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeE
Q 006275 496 NQAEALDLDKTVLETVAEAAE----------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (652)
Q Consensus 496 ~~~~~~~~~~tv~e~~~~~~~----------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lL 565 (652)
+.........++.+++..... ......+.++++.+++. +..++++.+||||||||++|||||+.+|++|
T Consensus 86 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qrv~laraL~~~p~ll 164 (272)
T PRK15056 86 SEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMV-EFRHRQIGELSGGQKKRVFLARAIAQQGQVI 164 (272)
T ss_pred ccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCCh-hHhcCCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 432111223456777643210 11123467789999995 5679999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhH
Q 006275 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVC 628 (652)
Q Consensus 566 lLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~ 628 (652)
||||||++||+.+++.+.++|+++ +.|||+||||++++..+||+++.+ +|++.. .|+.++.
T Consensus 165 llDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~-~g~~~~~ 228 (272)
T PRK15056 165 LLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLA-SGPTETT 228 (272)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEe-ecCHHhc
Confidence 999999999999999999999865 459999999999999999999877 899874 5766654
No 424
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1e-38 Score=342.87 Aligned_cols=197 Identities=28% Similarity=0.377 Sum_probs=169.2
Q ss_pred eeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------------cceec
Q 006275 429 NLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------------PNYFE 494 (652)
Q Consensus 429 ~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------------~~~~~ 494 (652)
|++++|+++.+ ++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++
T Consensus 4 ~l~~~~~~~~~--~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~ 81 (354)
T TIGR02142 4 RFSKRLGDFSL--DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVF 81 (354)
T ss_pred EEEEEECCEEE--EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEEEe
Confidence 89999987664 999999999999999999999999999999999999999999997652 12444
Q ss_pred ccccccCCCCCCHHHHHHHhhhhc----cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCC
Q 006275 495 QNQAEALDLDKTVLETVAEAAEDW----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (652)
Q Consensus 495 ~~~~~~~~~~~tv~e~~~~~~~~~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEP 570 (652)
|+ ..+++.+|+.+|+.+..... ....+.++++.+++. +..++++.+|||||||||+|||||+.+|++||||||
T Consensus 82 q~--~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LSgGqkqRvalAraL~~~p~lllLDEP 158 (354)
T TIGR02142 82 QE--ARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIG-HLLGRLPGRLSGGEKQRVAIGRALLSSPRLLLMDEP 158 (354)
T ss_pred cC--CccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCCh-hHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 43 45677899999998753221 123478899999995 678999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 571 t~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
|++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|++. ..|+.++....
T Consensus 159 ts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~~ 222 (354)
T TIGR02142 159 LAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVA-AAGPIAEVWAS 222 (354)
T ss_pred CcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEE-EECCHHHHhcC
Confidence 9999999999999998764 469999999999999999999999999997 45777766543
No 425
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-38 Score=330.35 Aligned_cols=208 Identities=25% Similarity=0.367 Sum_probs=171.7
Q ss_pred CCCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCeeEEEECceecc-----
Q 006275 420 SGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL----- 489 (652)
Q Consensus 420 ~~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~----- 489 (652)
|+.++|+++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 20 ~~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 99 (271)
T PRK14238 20 PKKVVFDTQNLNLWYGEDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYS 99 (271)
T ss_pred CCceEEEEeeeEEEECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccccc
Confidence 45668999999999988889999999999999999999999999999999999997 69999999997652
Q ss_pred -------cceecccccccCCCCCCHHHHHHHhhhh---cc----HHHHHHHHhhCCCC---hhhhccCcCCCCHHHHHHH
Q 006275 490 -------PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARL 552 (652)
Q Consensus 490 -------~~~~~~~~~~~~~~~~tv~e~~~~~~~~---~~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqrqrv 552 (652)
.+|++|+ ..++. .|+.+|+...... .. ...+.+.++.+++. .+..++++.+||||||||+
T Consensus 100 ~~~~~~~i~~v~q~--~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qrv 176 (271)
T PRK14238 100 VEELRTNVGMVFQK--PNPFP-KSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELKDRLHDNAYGLSGGQQQRL 176 (271)
T ss_pred HHHHhhhEEEEecC--Ccccc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHHHHHhcCcccCCHHHHHHH
Confidence 1344443 23443 5999999764321 11 12245566666431 2356789999999999999
Q ss_pred HHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 553 AFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 553 ~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
+|||||+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+||++++|++|++.. .|++++...
T Consensus 177 ~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~-~g~~~~~~~ 255 (271)
T PRK14238 177 CIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNE-YDDTDKIFS 255 (271)
T ss_pred HHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEE-eCCHHHHHc
Confidence 9999999999999999999999999999999999876 3699999999999999999999999999975 577776644
Q ss_pred h
Q 006275 631 S 631 (652)
Q Consensus 631 ~ 631 (652)
.
T Consensus 256 ~ 256 (271)
T PRK14238 256 N 256 (271)
T ss_pred C
Confidence 3
No 426
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-38 Score=330.45 Aligned_cols=207 Identities=25% Similarity=0.352 Sum_probs=172.9
Q ss_pred CCCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCeeEEEECceecc-----
Q 006275 420 SGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL----- 489 (652)
Q Consensus 420 ~~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~----- 489 (652)
.++++|+++|++++|+++.+|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|.++.
T Consensus 35 ~~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 35 GGKPHVVAKNFSIYYGEFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred CCceEEEEeeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 35678999999999988889999999999999999999999999999999999864 49999999997642
Q ss_pred -------cceecccccccCCCCCCHHHHHHHhhhh---cc----HHHHHHHHhhCCCC---hhhhccCcCCCCHHHHHHH
Q 006275 490 -------PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARL 552 (652)
Q Consensus 490 -------~~~~~~~~~~~~~~~~tv~e~~~~~~~~---~~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqrqrv 552 (652)
.+|++|+ ..+++ .|+.+|+.+.... .. .+.+.++++.+++. .+..++++.+|||||||||
T Consensus 115 ~~~~~~~i~~v~q~--~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv 191 (286)
T PRK14275 115 EVLLRKKIGMVFQK--PNPFP-KSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVSDRLDKNALGLSGGQQQRL 191 (286)
T ss_pred hHHhhhcEEEECCC--CCCCc-cCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchhhHhhCChhhCCHHHHHHH
Confidence 1244443 23444 5999999864321 11 23456778888763 2456889999999999999
Q ss_pred HHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 553 AFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 553 ~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
+|||||+.+|++|||||||++||+.++..+.+.|+++. .|||+||||++++..+|||+++|++|++. ..|+.++..+
T Consensus 192 ~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~-~~g~~~~~~~ 270 (286)
T PRK14275 192 CVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLV-EHAPTAQLFT 270 (286)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHh
Confidence 99999999999999999999999999999999998763 49999999999999999999999999997 4577776644
No 427
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-38 Score=326.23 Aligned_cols=203 Identities=28% Similarity=0.400 Sum_probs=170.2
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCC-----CeeEEEECceecc---------
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL--------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~--------- 489 (652)
.|+++||++.|+++++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 82 (250)
T PRK14240 3 KISVKDLDLFYGDFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQL 82 (250)
T ss_pred eEEEEEEEEEECCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHH
Confidence 58999999999888899999999999999999999999999999999999863 6999999997653
Q ss_pred ---cceecccccccCCCCCCHHHHHHHhhhhc-------cHHHHHHHHhhCCCCh---hhhccCcCCCCHHHHHHHHHHH
Q 006275 490 ---PNYFEQNQAEALDLDKTVLETVAEAAEDW-------RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCK 556 (652)
Q Consensus 490 ---~~~~~~~~~~~~~~~~tv~e~~~~~~~~~-------~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqrqrv~LAr 556 (652)
.+|++|+ ..+++ .|+.+|+.+....+ ..+.+.++++.+++.. ...++++.+||||||||++|||
T Consensus 83 ~~~i~~~~q~--~~~~~-~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~lar 159 (250)
T PRK14240 83 RKRVGMVFQQ--PNPFP-MSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKDRLKKSALGLSGGQQQRLCIAR 159 (250)
T ss_pred hccEEEEecC--CccCc-ccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHHHHhcCCCCCCHHHHHHHHHHH
Confidence 1244443 23444 89999998643211 1234667788887632 3468899999999999999999
Q ss_pred HHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++.+.++||++++|++|++.. .|+.+++..
T Consensus 160 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~~~ 234 (250)
T PRK14240 160 ALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVE-FGDTVDLFT 234 (250)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEE-eCCHHHHHh
Confidence 999999999999999999999999999999876 3599999999999999999999999999974 577766543
No 428
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-38 Score=323.26 Aligned_cols=201 Identities=30% Similarity=0.469 Sum_probs=172.4
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceeccc--------ceeccc
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP--------NYFEQN 496 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~--------~~~~~~ 496 (652)
|+++|++++|++. +|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ++.+|+
T Consensus 1 l~~~~l~~~~~~~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~~~~~i~~~~q~ 79 (235)
T cd03299 1 LKVENLSKDWKEF-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPPEKRDISYVPQN 79 (235)
T ss_pred CeeEeEEEEeCCc-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCChhHcCEEEEeec
Confidence 4689999999765 8999999999999999999999999999999999999999999999986531 344443
Q ss_pred ccccCCCCCCHHHHHHHhhhhc------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCC
Q 006275 497 QAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (652)
Q Consensus 497 ~~~~~~~~~tv~e~~~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEP 570 (652)
..+++..|+.+|+....... ...++.++++.+++. ...++++.+||||||||++||||++.+|++||||||
T Consensus 80 --~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP 156 (235)
T cd03299 80 --YALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGID-HLLNRKPETLSGGEQQRVAIARALVVNPKILLLDEP 156 (235)
T ss_pred --CccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hHHhcCcccCCHHHHHHHHHHHHHHcCCCEEEECCC
Confidence 34566789999997643211 123467889999994 678999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 571 t~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
|++||+.++..+.+.|+++ +.|||++||+++++..+||++++|++|++.. .|++++..+
T Consensus 157 t~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~~ 219 (235)
T cd03299 157 FSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQ-VGKPEEVFK 219 (235)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-ecCHHHHHh
Confidence 9999999999999998764 4699999999999999999999999999974 577666544
No 429
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-38 Score=328.31 Aligned_cols=205 Identities=24% Similarity=0.310 Sum_probs=172.9
Q ss_pred CcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCeeEEEECceecc-------
Q 006275 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL------- 489 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~------- 489 (652)
..+|+++|++++|+++++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 18 ~~~l~~~nl~~~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 97 (267)
T PRK14237 18 EIALSTKDLHVYYGKKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVY 97 (267)
T ss_pred CeEEEEeeEEEEECCeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChH
Confidence 457999999999998899999999999999999999999999999999999996 58999999998752
Q ss_pred -----cceecccccccCCCCCCHHHHHHHhhhhc-------cHHHHHHHHhhCCCCh---hhhccCcCCCCHHHHHHHHH
Q 006275 490 -----PNYFEQNQAEALDLDKTVLETVAEAAEDW-------RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAF 554 (652)
Q Consensus 490 -----~~~~~~~~~~~~~~~~tv~e~~~~~~~~~-------~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqrqrv~L 554 (652)
.+|++|. ..+++ .|+.+|+....... ....+.++++.+++.. ...++++.+||||||||++|
T Consensus 98 ~~~~~i~~v~q~--~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrl~l 174 (267)
T PRK14237 98 EMRKHIGMVFQR--PNPFA-KSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKDDLHKSALTLSGGQQQRLCI 174 (267)
T ss_pred HHhcceEEEecC--Ccccc-ccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhhhhcCCcccCCHHHHHHHHH
Confidence 1234433 23443 69999998643211 1234667788888742 35688999999999999999
Q ss_pred HHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||||+.+|++|||||||++||+.++..+.++|++.. .|||+|||+++++..+||++++|++|++.. .|+.++...
T Consensus 175 aral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~ 251 (267)
T PRK14237 175 ARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIE-YDKTRNIFT 251 (267)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEE-eCCHHHHhc
Confidence 999999999999999999999999999999998763 599999999999999999999999999984 577777644
No 430
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-38 Score=325.64 Aligned_cols=204 Identities=25% Similarity=0.396 Sum_probs=170.3
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCC-----eeEEEECceecc---------
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR-----GGEVLLGEHNVL--------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~-----~G~i~~~g~~~~--------- 489 (652)
+++++|+++.|+++.+|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++.
T Consensus 4 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 83 (252)
T PRK14272 4 LLSAQDVNIYYGDKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAM 83 (252)
T ss_pred EEEEeeeEEEECCEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHh
Confidence 689999999999889999999999999999999999999999999999999874 899999997652
Q ss_pred ---cceecccccccCCCCCCHHHHHHHhhhhc---c----HHHHHHHHhhCCCC---hhhhccCcCCCCHHHHHHHHHHH
Q 006275 490 ---PNYFEQNQAEALDLDKTVLETVAEAAEDW---R----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFCK 556 (652)
Q Consensus 490 ---~~~~~~~~~~~~~~~~tv~e~~~~~~~~~---~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqrqrv~LAr 556 (652)
.+|++|+ ..+++..|+.+|+....... . .+.+.+.+..+++. .+..++++.+||||||||++|||
T Consensus 84 ~~~i~~~~q~--~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~lar 161 (252)
T PRK14272 84 RRRVGMVFQK--PNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEVKDRLKTPATGLSGGQQQRLCIAR 161 (252)
T ss_pred hceeEEEecc--CccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhhhhhhcCCcccCCHHHHHHHHHHH
Confidence 1244443 34566789999997643211 1 12344556666542 23457889999999999999999
Q ss_pred HHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||+.+|+||||||||++||+.++..+.++|+++. .|||++|||++++..+|||+++|++|++. ..|+.++...
T Consensus 162 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 236 (252)
T PRK14272 162 ALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLV-EHGPTDQLFT 236 (252)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHh
Confidence 9999999999999999999999999999998763 69999999999999999999999999997 4678777654
No 431
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-38 Score=326.80 Aligned_cols=217 Identities=26% Similarity=0.362 Sum_probs=175.9
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCeeEEEECceecc---------
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL--------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~--------- 489 (652)
.-+++|+++.|+++++|+++||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.++|.++.
T Consensus 5 ~~~~~~l~~~~~~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 84 (251)
T PRK14244 5 HASVKNLNLWYGSKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLL 84 (251)
T ss_pred EEEeeeEEEEECCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHH
Confidence 3578999999988899999999999999999999999999999999999986 47999999997652
Q ss_pred ---cceecccccccCCCCCCHHHHHHHhhh--h------ccHHHHHHHHhhCCCCh---hhhccCcCCCCHHHHHHHHHH
Q 006275 490 ---PNYFEQNQAEALDLDKTVLETVAEAAE--D------WRIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFC 555 (652)
Q Consensus 490 ---~~~~~~~~~~~~~~~~tv~e~~~~~~~--~------~~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqrqrv~LA 555 (652)
.+|++|+ ..+++ .|+.+|+..... . .....+.++++.+++.. ...++.+.+||||||||++||
T Consensus 85 ~~~i~~v~q~--~~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~la 161 (251)
T PRK14244 85 RAKVGMVFQK--PNPFP-KSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELGDRLKDSAFELSGGQQQRLCIA 161 (251)
T ss_pred hhhEEEEecC--ccccc-CCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhhhHhhcChhhCCHHHHHHHHHH
Confidence 1344544 23444 499999876421 1 11234667889999853 245788999999999999999
Q ss_pred HHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhhcC
Q 006275 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTSFS 633 (652)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~~~ 633 (652)
|||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+|||+++|++|++.. .|+.+++.+..
T Consensus 162 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~~~~- 239 (251)
T PRK14244 162 RAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVE-YNTTQEIFKNP- 239 (251)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEE-eCCHHHHhcCC-
Confidence 9999999999999999999999999999999865 3699999999999999999999999999974 57777765432
Q ss_pred CcccccchhHHHhh
Q 006275 634 PFLLVPLRSYFFKH 647 (652)
Q Consensus 634 ~~~~~~~~~~~~~~ 647 (652)
....++.|.+.|
T Consensus 240 --~~~~~~~~~~~~ 251 (251)
T PRK14244 240 --QSSKTKRYIVDH 251 (251)
T ss_pred --CChHHHHhcccC
Confidence 122245565554
No 432
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=6.8e-39 Score=323.76 Aligned_cols=202 Identities=27% Similarity=0.349 Sum_probs=165.8
Q ss_pred ceEEEeEEEEeCC----eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC---CCCcEEEECCCC-------ce
Q 006275 97 GVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE---PDSGNVIKAKSN-------MK 162 (652)
Q Consensus 97 ~i~v~~ls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~---p~~G~i~~~~~~-------~~ 162 (652)
.+.++|+++.|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.+ ..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (226)
T cd03234 3 VLPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKC 82 (226)
T ss_pred cceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhccc
Confidence 3678999999965 469999999999999999999999999999999999999 999999998743 36
Q ss_pred EEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHH-
Q 006275 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK- 241 (652)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~- 241 (652)
++|++|++.+++..|++||+....... . .. . .........+.+
T Consensus 83 i~~~~q~~~~~~~~tv~enl~~~~~~~--~-----------~~---~--------------------~~~~~~~~~~~~~ 126 (226)
T cd03234 83 VAYVRQDDILLPGLTVRETLTYTAILR--L-----------PR---K--------------------SSDAIRKKRVEDV 126 (226)
T ss_pred EEEeCCCCccCcCCcHHHHHHHHHHhh--c-----------cc---c--------------------cchHHHHHHHHHH
Confidence 999999998877889999985321100 0 00 0 000001112333
Q ss_pred HhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCH-H
Q 006275 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDR-A 317 (652)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~-~ 317 (652)
+++.+++. +..++.+.+|||||+|||+|||||+.+|++|||||||+|||+.++..+.++|+ +.+.|+|++||+. +
T Consensus 127 ~l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~ 205 (226)
T cd03234 127 LLRDLALT-RIGGNLVKGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRS 205 (226)
T ss_pred HHHhhcch-hhhcccccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCH
Confidence 67777775 56778899999999999999999999999999999999999999999988874 3488999999998 6
Q ss_pred HHHhhcCeEEEEcCCeEE
Q 006275 318 FLDQLCTKIVETEMGVSR 335 (652)
Q Consensus 318 ~l~~~~d~ii~l~~G~~~ 335 (652)
.+.++||+++++++|++.
T Consensus 206 ~~~~~~d~i~~l~~G~i~ 223 (226)
T cd03234 206 DLFRLFDRILLLSSGEIV 223 (226)
T ss_pred HHHHhCCEEEEEeCCEEE
Confidence 888999999999999874
No 433
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=3.9e-39 Score=326.42 Aligned_cols=189 Identities=29% Similarity=0.405 Sum_probs=157.7
Q ss_pred eeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCc-----eEEEEeccCccCCCCCHHHHHHHhhH
Q 006275 113 LKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM-----KIAFLSQEFEVSMSRTVREEFMSAFK 187 (652)
Q Consensus 113 L~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~-----~i~~v~Q~~~~~~~~Tv~e~i~~~~~ 187 (652)
|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+. ..+|++|++.+++..|+.||+...+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~~~l~~~~tv~e~l~~~~~ 80 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGPDRMVVFQNYSLLPWLTVRENIALAVD 80 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhheEEecCcccCCCCCHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999987432 36899999988778899999853211
Q ss_pred HHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccccCCCCCCChHHHHH
Q 006275 188 EEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMR 267 (652)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqR 267 (652)
.. .. ..+......++.++++.+|+. +..++++.+||||||||
T Consensus 81 ~~-------------~~------------------------~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qr 122 (230)
T TIGR01184 81 RV-------------LP------------------------DLSKSERRAIVEEHIALVGLT-EAADKRPGQLSGGMKQR 122 (230)
T ss_pred hc-------------cc------------------------CCCHHHHHHHHHHHHHHcCCH-HHHcCChhhCCHHHHHH
Confidence 00 00 000111234566788888986 56788899999999999
Q ss_pred HHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCC
Q 006275 268 MSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGN 340 (652)
Q Consensus 268 v~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~ 340 (652)
|+|||||+.+|++|||||||+|||+.+++++.++|++ .|+|||+|||+++++..+||+|++|++|++. ..|+
T Consensus 123 v~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~-~~~~ 198 (230)
T TIGR01184 123 VAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAA-NIGQ 198 (230)
T ss_pred HHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEe-cccC
Confidence 9999999999999999999999999999999887743 4889999999999999999999999999884 4454
No 434
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.4e-39 Score=312.63 Aligned_cols=162 Identities=39% Similarity=0.572 Sum_probs=146.0
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC------------ceEEE
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------MKIAF 165 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~------------~~i~~ 165 (652)
|+++|++++|+++++++++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|
T Consensus 1 i~~~~l~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~ 80 (178)
T cd03229 1 LELKNVSKRYGQKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRIGM 80 (178)
T ss_pred CEEEEEEEEECCeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcEEE
Confidence 478999999988889999999999999999999999999999999999999999999987732 25999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh
Q 006275 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (652)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (652)
++|++.+++..|++||+.
T Consensus 81 ~~q~~~~~~~~t~~~~l~-------------------------------------------------------------- 98 (178)
T cd03229 81 VFQDFALFPHLTVLENIA-------------------------------------------------------------- 98 (178)
T ss_pred EecCCccCCCCCHHHhee--------------------------------------------------------------
Confidence 999988766778887741
Q ss_pred cCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---C-CCeEEEEecCHHHHHh
Q 006275 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---Q-DVPMVIISHDRAFLDQ 321 (652)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~-g~tvIivsHd~~~l~~ 321 (652)
. .||||||||++|||||+.+|++|||||||+|||+.++.++.++|++ . +.|+|++||+++++..
T Consensus 99 ------~------~lS~G~~qr~~la~al~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~ 166 (178)
T cd03229 99 ------L------GLSGGQQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAAR 166 (178)
T ss_pred ------e------cCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH
Confidence 0 0999999999999999999999999999999999999999988743 3 7899999999999999
Q ss_pred hcCeEEEEcCCe
Q 006275 322 LCTKIVETEMGV 333 (652)
Q Consensus 322 ~~d~ii~l~~G~ 333 (652)
+||++++|++|+
T Consensus 167 ~~d~i~~l~~g~ 178 (178)
T cd03229 167 LADRVVVLRDGK 178 (178)
T ss_pred hcCEEEEEeCCC
Confidence 999999998873
No 435
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.1e-40 Score=309.57 Aligned_cols=205 Identities=26% Similarity=0.401 Sum_probs=180.0
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecccc----------ee
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPN----------YF 493 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~----------~~ 493 (652)
||+++||+++|+++.+++++|++|++|.+++|+|||||||||||.++++++++++|+|+++|.++... ..
T Consensus 1 MI~i~nv~K~y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d~G~i~i~g~~~~~~~s~~LAk~lSIL 80 (252)
T COG4604 1 MITIENVSKSYGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKDSGEITIDGLELTSTPSKELAKKLSIL 80 (252)
T ss_pred CeeehhhhHhhCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhccccCceEEEeeeecccCChHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999887421 12
Q ss_pred cccccccCCCCCCHHHHHHHhhh--------hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeE
Q 006275 494 EQNQAEALDLDKTVLETVAEAAE--------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (652)
Q Consensus 494 ~~~~~~~~~~~~tv~e~~~~~~~--------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lL 565 (652)
. |.......+||++-+.++.- ..+...+.++++.+++ .++.+++..+||||||||..+|..++++.+.+
T Consensus 81 k--Q~N~i~~rlTV~dLv~FGRfPYSqGRlt~eD~~~I~~aieyl~L-~~l~dryLd~LSGGQrQRAfIAMVlaQdTdyv 157 (252)
T COG4604 81 K--QENHINSRLTVRDLVGFGRFPYSQGRLTKEDRRIINEAIEYLHL-EDLSDRYLDELSGGQRQRAFIAMVLAQDTDYV 157 (252)
T ss_pred H--hhchhhheeEHHHHhhcCCCcccCCCCchHHHHHHHHHHHHhcc-cchHHHhHHhcccchhhhhhhheeeeccCcEE
Confidence 2 33445678899999988631 1223457888999998 57899999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHH----hcCceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhhc
Q 006275 566 VLDEPTNHLDIPSKEMLEEAIS----EYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTSF 632 (652)
Q Consensus 566 lLDEPt~~LD~~~~~~l~~~l~----~~~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~~ 632 (652)
+||||.|+||......+++.++ ++++||++|-||++|+..++|+|+.|++|+++ ..|++++.++..
T Consensus 158 lLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINfAS~YsD~IVAlK~G~vv-~~G~~~eii~~~ 227 (252)
T COG4604 158 LLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINFASCYSDHIVALKNGKVV-KQGSPDEIIQPE 227 (252)
T ss_pred EecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccHHHhhhhheeeecCCEEE-ecCCHHHhcCHH
Confidence 9999999999999988888876 45789999999999999999999999999997 679999876543
No 436
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=2.4e-39 Score=326.99 Aligned_cols=200 Identities=24% Similarity=0.429 Sum_probs=161.0
Q ss_pred CCceEEEeEEEEeCC---eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------c
Q 006275 95 SSGVKLENISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------M 161 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~ 161 (652)
.++|+++|++++|++ .++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. .
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 456999999999975 369999999999999999999999999999999999999999999998753 2
Q ss_pred eEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHH
Q 006275 162 KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (652)
Q Consensus 162 ~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (652)
.++|++|++.++ ..|+++|+...+... .. ..+.. . .....+.+
T Consensus 89 ~i~~~~q~~~l~-~~tv~~nl~~~~~~~-~~----~~~~~------------------------~-------~~~~~~~~ 131 (226)
T cd03248 89 KVSLVGQEPVLF-ARSLQDNIAYGLQSC-SF----ECVKE------------------------A-------AQKAHAHS 131 (226)
T ss_pred hEEEEecccHHH-hhhHHHHhccccCCC-CH----HHHHH------------------------H-------HHHcCcHH
Confidence 599999998764 469999985322100 00 00000 0 00111234
Q ss_pred Hhhhc--CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHH
Q 006275 242 LMPEL--GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRA 317 (652)
Q Consensus 242 ll~~l--gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~ 317 (652)
+++.+ |+. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|++ .+.|||++||+++
T Consensus 132 ~l~~l~~gl~-~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~ 210 (226)
T cd03248 132 FISELASGYD-TEVGEKGSQLSGGQKQRVAIARALIRNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLS 210 (226)
T ss_pred HHHhcccccc-chhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHH
Confidence 55556 665 346778999999999999999999999999999999999999999999988753 3689999999999
Q ss_pred HHHhhcCeEEEEcCCe
Q 006275 318 FLDQLCTKIVETEMGV 333 (652)
Q Consensus 318 ~l~~~~d~ii~l~~G~ 333 (652)
++. .||+|++|++|+
T Consensus 211 ~~~-~~d~i~~l~~g~ 225 (226)
T cd03248 211 TVE-RADQILVLDGGR 225 (226)
T ss_pred HHH-hCCEEEEecCCc
Confidence 996 599999999885
No 437
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.4e-39 Score=374.33 Aligned_cols=247 Identities=25% Similarity=0.401 Sum_probs=191.4
Q ss_pred HHHHhhhhhHHhhhccCccccccccccccCCCCCCCCCCCceEEEeEEEEeCCee---eeeeeeEEEECCCEEEEECCCC
Q 006275 57 KSIAKAQSDVESLFSSSADEFENKKYSNKQSNTGASSISSGVKLENISKSYKGVT---VLKDVTWEVKKGEKVGLVGVNG 133 (652)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~ls~~y~~~~---vL~~vsl~i~~Ge~~~lvG~NG 133 (652)
..+.++..++.++|...++.+......+ .+.........|+++||+|.|+.+| ||+|+||+|++|+.+|||||+|
T Consensus 949 Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~--~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SG 1026 (1228)
T KOG0055|consen 949 PDISKAKIAAGSIFEILDRKPTIDPDST--SGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSG 1026 (1228)
T ss_pred cHHHHHHHHHHHHHHHhcCCCCCCCCCC--CCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCC
Confidence 3456666667777776655442222221 1111122345699999999998765 9999999999999999999999
Q ss_pred ccHHHHHHHHHcCCCCCCcEEEECCCCc----------eEEEEeccCccCCCCCHHHHHHHhhHH----HHHHHHHHHHH
Q 006275 134 AGKTTQLRIIAGQEEPDSGNVIKAKSNM----------KIAFLSQEFEVSMSRTVREEFMSAFKE----EMEIAGKLERV 199 (652)
Q Consensus 134 sGKSTLl~~L~G~~~p~~G~i~~~~~~~----------~i~~v~Q~~~~~~~~Tv~e~i~~~~~~----~~~~~~~~~~~ 199 (652)
|||||.+.+|..+|.|++|.|.++|.+. +||.|+|+|.+ ++.|++|||..+... +...+.++..+
T Consensus 1027 sGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~L-F~~TIrENI~YG~~~vs~~eIi~Aak~ANa 1105 (1228)
T KOG0055|consen 1027 SGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVL-FNGTIRENIAYGSEEVSEEEIIEAAKLANA 1105 (1228)
T ss_pred CCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchh-hcccHHHHHhccCCCCCHHHHHHHHHHhhh
Confidence 9999999999999999999999998653 59999999987 889999999865211 11111222222
Q ss_pred HHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCC
Q 006275 200 QKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPD 279 (652)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~ 279 (652)
+..+.+.++ |.++..+++ ..+||||||||+|||||+++||+
T Consensus 1106 H~FI~sLP~--------------------------------------GyDT~vGer-G~QLSGGQKQRIAIARAilRnPk 1146 (1228)
T KOG0055|consen 1106 HNFISSLPQ--------------------------------------GYDTRVGER-GVQLSGGQKQRIAIARAILRNPK 1146 (1228)
T ss_pred HHHHhcCcC--------------------------------------cccCccCcc-cCcCCchHHHHHHHHHHHHcCCC
Confidence 222222111 444444444 78999999999999999999999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHHHH
Q 006275 280 LLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLE 347 (652)
Q Consensus 280 iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~~~ 347 (652)
||||||.||+||.++.+.+.+.|.+ .|+|.|+|.|++..+ +-||.|+|+++|++ +.+|+.++++..
T Consensus 1147 ILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTI-qnaD~I~Vi~~G~V-vE~GtH~~L~~~ 1214 (1228)
T KOG0055|consen 1147 ILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTI-QNADVIAVLKNGKV-VEQGTHDELLAK 1214 (1228)
T ss_pred eeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhh-hcCCEEEEEECCEE-EecccHHHHHhC
Confidence 9999999999999999999999964 589999999999999 56999999999998 688998887653
No 438
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-39 Score=324.42 Aligned_cols=209 Identities=26% Similarity=0.340 Sum_probs=181.7
Q ss_pred EEEEEeeeeEeCCe------------------------eeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCee
Q 006275 424 VVTIKNLEFGYEDR------------------------LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGG 479 (652)
Q Consensus 424 ~i~~~~v~~~y~~~------------------------~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G 479 (652)
.|+++||++-||.+ .-++|+||+|+.||++.|.|-+|||||||+|+|.|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 47888888887631 237899999999999999999999999999999999999999
Q ss_pred EEEECceeccc--------------ceecccccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhcc
Q 006275 480 EVLLGEHNVLP--------------NYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDR 539 (652)
Q Consensus 480 ~i~~~g~~~~~--------------~~~~~~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~ 539 (652)
+|.++|.++.. ..++| ...+.|+.||.+|+.++.+. .+.+.+.++|+.+|+. .+.++
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ--~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~-~~~~~ 160 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQ--SFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLE-GYADK 160 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhh--hhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCch-hhhhc
Confidence 99999988631 12333 45688999999999987542 2345688999999995 68899
Q ss_pred CcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhccEEEEEeC
Q 006275 540 KVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKG 615 (652)
Q Consensus 540 ~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~----~~~tvi~vsHd~~~i~~~~drvi~l~~ 615 (652)
+|.+|||||||||.|||||+.+|+|||+|||+|+|||--+..|++-|.+ +.+|||+||||++++.++.|||..|++
T Consensus 161 yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIaimkd 240 (386)
T COG4175 161 YPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDRIAIMKD 240 (386)
T ss_pred CcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccceEEEecC
Confidence 9999999999999999999999999999999999999999999987754 467999999999999999999999999
Q ss_pred CEEEeecCChhhHhhhcCCcc
Q 006275 616 SNLQDYAGDYNVCFTSFSPFL 636 (652)
Q Consensus 616 g~i~~~~g~~~~~~~~~~~~~ 636 (652)
|+|+. .|.+++++...+..|
T Consensus 241 G~ivQ-~Gtp~eIl~~PAndY 260 (386)
T COG4175 241 GEIVQ-VGTPEEILLNPANDY 260 (386)
T ss_pred CeEEE-eCCHHHHHcCccHHH
Confidence 99985 599999887777665
No 439
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-38 Score=328.21 Aligned_cols=206 Identities=24% Similarity=0.371 Sum_probs=172.9
Q ss_pred CcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCC-----CeeEEEECceecc-------
Q 006275 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL------- 489 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~------- 489 (652)
.++|+++||+++|+++.+|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 19 ~~~l~i~nl~~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 19 APAMAAVNLTLGFAGKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred CcEEEEeeEEEEECCEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 4579999999999989999999999999999999999999999999999999985 6999999997652
Q ss_pred ----cceecccccccCCCCCCHHHHHHHhhhh---ccH----HHHHHHHhhCCCCh---hhhccCcCCCCHHHHHHHHHH
Q 006275 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED---WRI----DDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFC 555 (652)
Q Consensus 490 ----~~~~~~~~~~~~~~~~tv~e~~~~~~~~---~~~----~~~~~~L~~~~l~~---~~~~~~~~~LSgGqrqrv~LA 555 (652)
.+|++|. ..+++ .|+.+|+...... ... ..+.++++.+++.. +..++.+.+||||||||++||
T Consensus 99 ~~~~i~~v~q~--~~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~LA 175 (276)
T PRK14271 99 FRRRVGMLFQR--PNPFP-MSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLCLA 175 (276)
T ss_pred HhhheEEeccC--CccCC-ccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhhhHhhCCcccCCHHHHHHHHHH
Confidence 1244443 23444 7999999764311 111 23456788888853 245788999999999999999
Q ss_pred HHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
|||+.+|+||||||||++||+.+++.+.+.|+++ ..|||+||||++++.++|||+++|++|++.. .|+.+++.+.
T Consensus 176 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~-~g~~~~~~~~ 252 (276)
T PRK14271 176 RTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVE-EGPTEQLFSS 252 (276)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHHhC
Confidence 9999999999999999999999999999999876 3699999999999999999999999999974 5777776543
No 440
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-38 Score=331.58 Aligned_cols=205 Identities=30% Similarity=0.422 Sum_probs=173.5
Q ss_pred CcEEEEEeeeeEeCC--eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCe---eEEEECceecc-------
Q 006275 422 RSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRG---GEVLLGEHNVL------- 489 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~--~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~---G~i~~~g~~~~------- 489 (652)
..+|+++|+++.|++ +++|+++||+|++||++||+||||||||||+++|+|+++|++ |+|.++|.++.
T Consensus 3 ~~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 3 DNIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred CceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 347999999999964 469999999999999999999999999999999999999987 89999998763
Q ss_pred ---cceecccccccCCCCCCHHHHHHHhhhh--cc----HHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHcc
Q 006275 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (652)
Q Consensus 490 ---~~~~~~~~~~~~~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~ 560 (652)
.+|++|+.. ...+..|+.+|+.+.... .. .+.+.++++.+++. +..++++.+||||||||++|||||+.
T Consensus 83 ~~~ig~v~q~~~-~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LS~G~~qrv~laral~~ 160 (282)
T PRK13640 83 REKVGIVFQNPD-NQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGML-DYIDSEPANLSGGQKQRVAIAGILAV 160 (282)
T ss_pred HhheEEEEECHH-HhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCh-hHhcCCcccCCHHHHHHHHHHHHHHc
Confidence 134555432 234578999999764321 11 23477889999995 67899999999999999999999999
Q ss_pred CCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 561 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
+|++|||||||+|||+.++..+.+.|+++ +.|||+|||+++++. .|||+++|++|++.. .|++++...
T Consensus 161 ~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~-~~d~i~~l~~G~i~~-~g~~~~~~~ 232 (282)
T PRK13640 161 EPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEAN-MADQVLVLDDGKLLA-QGSPVEIFS 232 (282)
T ss_pred CCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEE-eCCHHHHhc
Confidence 99999999999999999999999999764 469999999999995 799999999999984 577776543
No 441
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-39 Score=302.44 Aligned_cols=204 Identities=25% Similarity=0.376 Sum_probs=179.2
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceeccc------------
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP------------ 490 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~------------ 490 (652)
+.++++|+.++||...+|++|||+-++|+++.|+|.+||||||+|+||.=+.+|+.|.|.++|..+..
T Consensus 5 ~~l~v~dlHK~~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~ad 84 (256)
T COG4598 5 NALEVEDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPAD 84 (256)
T ss_pred cceehhHHHhhcccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeCC
Confidence 35899999999999999999999999999999999999999999999999999999999999976521
Q ss_pred -----------ceecccccccCCCCCCHHHHHHHhhh-------hccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHH
Q 006275 491 -----------NYFEQNQAEALDLDKTVLETVAEAAE-------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARL 552 (652)
Q Consensus 491 -----------~~~~~~~~~~~~~~~tv~e~~~~~~~-------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv 552 (652)
+.++ |..++...+|+.||+..+.- ....+.+..+|.++|+. +..+.+|..||||||||+
T Consensus 85 ~~q~~r~Rs~L~mVF--Q~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~-ek~~~YP~~LSGGQQQR~ 161 (256)
T COG4598 85 KRQLQRLRTRLGMVF--QHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIA-EKADAYPAHLSGGQQQRV 161 (256)
T ss_pred HHHHHHHHHHhhHhh--hhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCch-hhhhcCccccCchHHHHH
Confidence 1122 33467788999999987632 22345678899999995 667899999999999999
Q ss_pred HHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 553 AFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 553 ~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
+|||||+.+|+++|+|||||+|||+-...+...++++ +.|+++|||.+.|+.+++++|+++++|.|. ..|++++.+
T Consensus 162 aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iE-E~G~P~qvf 240 (256)
T COG4598 162 AIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIE-EEGPPEQVF 240 (256)
T ss_pred HHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceec-ccCChHHHh
Confidence 9999999999999999999999999999988888765 679999999999999999999999999986 579988876
Q ss_pred h
Q 006275 630 T 630 (652)
Q Consensus 630 ~ 630 (652)
.
T Consensus 241 ~ 241 (256)
T COG4598 241 G 241 (256)
T ss_pred c
Confidence 3
No 442
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-39 Score=327.04 Aligned_cols=214 Identities=26% Similarity=0.385 Sum_probs=183.0
Q ss_pred EEEEEeeeeEeCC----eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC-C----CeeEEEECceecc-----
Q 006275 424 VVTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-P----RGGEVLLGEHNVL----- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~----~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~-p----~~G~i~~~g~~~~----- 489 (652)
+++++|+++.|.. ..+++||||+|++||++||||.|||||||+.++|+|+++ | .+|+|.++|.++.
T Consensus 1 lL~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~ 80 (316)
T COG0444 1 LLEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEK 80 (316)
T ss_pred CceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHH
Confidence 3789999999963 469999999999999999999999999999999999997 4 5799999998652
Q ss_pred ---------cceecccccccCCCCCCHHHHHHHhhhhc--------cHHHHHHHHhhCCCChh--hhccCcCCCCHHHHH
Q 006275 490 ---------PNYFEQNQAEALDLDKTVLETVAEAAEDW--------RIDDIKGLLGRCNFKAD--MLDRKVSLLSGGEKA 550 (652)
Q Consensus 490 ---------~~~~~~~~~~~~~~~~tv~e~~~~~~~~~--------~~~~~~~~L~~~~l~~~--~~~~~~~~LSgGqrq 550 (652)
.++++|++...++|-+++-+.+....... ..+.+.++|+.+|+... ..+.+|.+|||||||
T Consensus 81 ~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhelSGGMrQ 160 (316)
T COG0444 81 ELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYPHELSGGMRQ 160 (316)
T ss_pred HHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCCcccCCcHHH
Confidence 24678887788899999988877654311 13468899999999754 679999999999999
Q ss_pred HHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChh
Q 006275 551 RLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYN 626 (652)
Q Consensus 551 rv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~ 626 (652)
||.||.||+.+|++||.||||.+||...+..+.++|++. +.|+|+||||+..+.++||||+||+.|+|++. |+.+
T Consensus 161 RV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iVE~-g~~~ 239 (316)
T COG0444 161 RVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIVEE-GPVE 239 (316)
T ss_pred HHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEEEe-CCHH
Confidence 999999999999999999999999999999999988754 56999999999999999999999999999975 7776
Q ss_pred hHh-hhcCCcccc
Q 006275 627 VCF-TSFSPFLLV 638 (652)
Q Consensus 627 ~~~-~~~~~~~~~ 638 (652)
+++ +..+||-+.
T Consensus 240 ~i~~~P~HPYT~~ 252 (316)
T COG0444 240 EIFKNPKHPYTRG 252 (316)
T ss_pred HHhcCCCChHHHH
Confidence 654 555555443
No 443
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1e-38 Score=321.01 Aligned_cols=191 Identities=30% Similarity=0.494 Sum_probs=161.6
Q ss_pred EEEEeeeeEeCC--eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------cce
Q 006275 425 VTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNY 492 (652)
Q Consensus 425 i~~~~v~~~y~~--~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~ 492 (652)
|+++|+++.|++ +.+|+|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.++|.++. .+|
T Consensus 3 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (220)
T cd03245 3 IEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNIGY 82 (220)
T ss_pred EEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhEEE
Confidence 789999999975 57999999999999999999999999999999999999999999999997652 234
Q ss_pred ecccccccCCCCCCHHHHHHHhhhhccHHHHHHHHhhCCCChhhhccC-----------cCCCCHHHHHHHHHHHHHccC
Q 006275 493 FEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRK-----------VSLLSGGEKARLAFCKFMVKP 561 (652)
Q Consensus 493 ~~~~~~~~~~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~-----------~~~LSgGqrqrv~LAral~~~ 561 (652)
++|+. .++ ..|+.+|+...........+.++++.+++. +..++. +.+||||||||++|||||+.+
T Consensus 83 ~~q~~--~~~-~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~ 158 (220)
T cd03245 83 VPQDV--TLF-YGTLRDNITLGAPLADDERILRAAELAGVT-DFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLND 158 (220)
T ss_pred eCCCC--ccc-cchHHHHhhcCCCCCCHHHHHHHHHHcCcH-HHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcC
Confidence 45543 333 369999987643323334566778888874 445554 469999999999999999999
Q ss_pred CCeEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEeCCEEEe
Q 006275 562 STLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (652)
Q Consensus 562 p~lLlLDEPt~~LD~~~~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~drvi~l~~g~i~~ 620 (652)
|++|||||||+|||+.++..+.+.|+++. .|||+||||++++ .+||++++|++|++..
T Consensus 159 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~-~~~d~v~~l~~g~i~~ 218 (220)
T cd03245 159 PPILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLL-DLVDRIIVMDSGRIVA 218 (220)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHH-HhCCEEEEEeCCeEee
Confidence 99999999999999999999999998764 5999999999987 6899999999999863
No 444
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=2.2e-38 Score=325.20 Aligned_cols=204 Identities=28% Similarity=0.404 Sum_probs=168.7
Q ss_pred CcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCC--CCCCeeEEEECceeccc---------
Q 006275 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGL--EKPRGGEVLLGEHNVLP--------- 490 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~--~~p~~G~i~~~g~~~~~--------- 490 (652)
+++|+++|+++.|+++.+|+++||+|++||++||+|+||||||||+++|+|+ ++|++|+|.++|.++..
T Consensus 5 ~~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T CHL00131 5 KPILEIKNLHASVNENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHL 84 (252)
T ss_pred CceEEEEeEEEEeCCEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhee
Confidence 3479999999999888899999999999999999999999999999999998 58999999999976521
Q ss_pred ceecccccccCCCCCCHHHHHHHhhhh---------cc----HHHHHHHHhhCCCChhhhccCcC-CCCHHHHHHHHHHH
Q 006275 491 NYFEQNQAEALDLDKTVLETVAEAAED---------WR----IDDIKGLLGRCNFKADMLDRKVS-LLSGGEKARLAFCK 556 (652)
Q Consensus 491 ~~~~~~~~~~~~~~~tv~e~~~~~~~~---------~~----~~~~~~~L~~~~l~~~~~~~~~~-~LSgGqrqrv~LAr 556 (652)
++....+...+++..++.+++...... .. ...+.++++.+++.....++++. .|||||||||+|||
T Consensus 85 ~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~la~ 164 (252)
T CHL00131 85 GIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVNEGFSGGEKKRNEILQ 164 (252)
T ss_pred eEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccccCCCHHHHHHHHHHH
Confidence 111111223455667888887643210 01 13467789999996445678887 59999999999999
Q ss_pred HHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhh-ccEEEEEeCCEEEeecCChh
Q 006275 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQI-VNRVVEVKGSNLQDYAGDYN 626 (652)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~-~drvi~l~~g~i~~~~g~~~ 626 (652)
||+.+|+||||||||++||+.+++.+.++|+++ +.|||+||||++++..+ ||++++|++|++. +.|+++
T Consensus 165 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~-~~~~~~ 237 (252)
T CHL00131 165 MALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKII-KTGDAE 237 (252)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEE-EecChh
Confidence 999999999999999999999999999999865 46999999999999887 8999999999997 457766
No 445
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-39 Score=304.27 Aligned_cols=194 Identities=27% Similarity=0.432 Sum_probs=172.2
Q ss_pred EEEEEeeeeEeCCee--eeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-----cceeccc
Q 006275 424 VVTIKNLEFGYEDRL--LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----PNYFEQN 496 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~--vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----~~~~~~~ 496 (652)
++.+++++.+|++++ +|+|+|++|.+||.++++||+||||||||++++|+.+|+.|+|.++|..+. .+.++|+
T Consensus 3 ~l~~~~~sl~y~g~~~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~~G~i~l~~r~i~gPgaergvVFQ~ 82 (259)
T COG4525 3 MLNVSHLSLSYEGKPRSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPSRGSIQLNGRRIEGPGAERGVVFQN 82 (259)
T ss_pred eeehhheEEecCCcchhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcccceEEECCEeccCCCccceeEecc
Confidence 578899999999876 999999999999999999999999999999999999999999999998773 2456665
Q ss_pred ccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCC
Q 006275 497 QAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (652)
Q Consensus 497 ~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEP 570 (652)
+.+.|.+++.+|+.++... .+.+.+.+.|..+|+. +..++++.+|||||||||.|||||+.+|++|+||||
T Consensus 83 --~~LlPWl~~~dNvafgL~l~Gi~k~~R~~~a~q~l~~VgL~-~~~~~~i~qLSGGmrQRvGiARALa~eP~~LlLDEP 159 (259)
T COG4525 83 --EALLPWLNVIDNVAFGLQLRGIEKAQRREIAHQMLALVGLE-GAEHKYIWQLSGGMRQRVGIARALAVEPQLLLLDEP 159 (259)
T ss_pred --CccchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCcc-cccccceEeecchHHHHHHHHHHhhcCcceEeecCc
Confidence 4688999999999997542 2234577889999995 667999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEe--CCEEEe
Q 006275 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVK--GSNLQD 620 (652)
Q Consensus 571 t~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~--~g~i~~ 620 (652)
+++||.-+++.|++++.+. ++.+++||||++++.-+++|+++|. .|++++
T Consensus 160 fgAlDa~tRe~mQelLldlw~~tgk~~lliTH~ieEAlflatrLvvlsp~pgRvv~ 215 (259)
T COG4525 160 FGALDALTREQMQELLLDLWQETGKQVLLITHDIEEALFLATRLVVLSPGPGRVVE 215 (259)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHhhhheeEEecCCCceeeE
Confidence 9999999999999988643 5789999999999999999999998 467764
No 446
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=7.3e-39 Score=317.00 Aligned_cols=185 Identities=25% Similarity=0.364 Sum_probs=156.4
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------ceEEEEec
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLSQ 168 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------~~i~~v~Q 168 (652)
|+++|+++.|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|
T Consensus 1 l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 80 (198)
T TIGR01189 1 LAARNLACSRGERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQRDEPHRNILYLGH 80 (198)
T ss_pred CEEEEEEEEECCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccchHHhhhheEEecc
Confidence 478999999999899999999999999999999999999999999999999999999998753 35899999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCC
Q 006275 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (652)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (652)
++.+++..|+.+|+..... . .. .. +..+.++++.+|+
T Consensus 81 ~~~~~~~~tv~~~l~~~~~---------------~--------------------------~~-~~-~~~~~~~l~~~~l 117 (198)
T TIGR01189 81 LPGLKPELSALENLHFWAA---------------I--------------------------HG-GA-QRTIEDALAAVGL 117 (198)
T ss_pred CcccccCCcHHHHHHHHHH---------------H--------------------------cC-Cc-HHHHHHHHHHcCC
Confidence 9877777899999752100 0 00 00 2245567788888
Q ss_pred CcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCe
Q 006275 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTK 325 (652)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~d~ 325 (652)
. +..++++.+|||||||||+||||++.+|++|||||||++||+.+++.+.++|+ +.|.|||++||+...+ .|++
T Consensus 118 ~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~--~~~~ 194 (198)
T TIGR01189 118 T-GFEDLPAAQLSAGQQRRLALARLWLSRAPLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLGL--VEAR 194 (198)
T ss_pred H-HHhcCChhhcCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEcccccc--cceE
Confidence 6 56788899999999999999999999999999999999999999999988875 3588999999998666 4677
Q ss_pred EEE
Q 006275 326 IVE 328 (652)
Q Consensus 326 ii~ 328 (652)
++.
T Consensus 195 ~~~ 197 (198)
T TIGR01189 195 ELR 197 (198)
T ss_pred Eee
Confidence 664
No 447
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-39 Score=360.59 Aligned_cols=202 Identities=24% Similarity=0.303 Sum_probs=174.7
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-----------cc
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PN 491 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~ 491 (652)
++|+++|++++|+++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 4 ~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~ 83 (510)
T PRK09700 4 PYISMAGIGKSFGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGIG 83 (510)
T ss_pred ceEEEeeeEEEcCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCeE
Confidence 5799999999999889999999999999999999999999999999999999999999999997652 23
Q ss_pred eecccccccCCCCCCHHHHHHHhhh------h-------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHH
Q 006275 492 YFEQNQAEALDLDKTVLETVAEAAE------D-------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (652)
Q Consensus 492 ~~~~~~~~~~~~~~tv~e~~~~~~~------~-------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral 558 (652)
|++|+ ..+++..|+.+|+..... . .....+.++++.+|+. +..++++.+|||||||||+|||||
T Consensus 84 ~v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qrv~ia~al 160 (510)
T PRK09700 84 IIYQE--LSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLK-VDLDEKVANLSISHKQMLEIAKTL 160 (510)
T ss_pred EEeec--ccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCC-CCcccchhhCCHHHHHHHHHHHHH
Confidence 44443 345677899999975321 0 0123467889999995 567999999999999999999999
Q ss_pred ccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhH
Q 006275 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVC 628 (652)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~ 628 (652)
+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+||++++|++|++. +.|+++++
T Consensus 161 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~-~~g~~~~~ 232 (510)
T PRK09700 161 MLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSV-CSGMVSDV 232 (510)
T ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEe-eecchhhC
Confidence 9999999999999999999999999998764 469999999999999999999999999996 55766654
No 448
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-38 Score=324.48 Aligned_cols=203 Identities=22% Similarity=0.332 Sum_probs=170.8
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCC-----CeeEEEECceecc---------
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL--------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~--------- 489 (652)
+|+++|+++.|+++++|+++||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 3 ~l~~~~l~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~ 82 (250)
T PRK14262 3 IIEIENFSAYYGEKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEY 82 (250)
T ss_pred eEEEEeeEEEeCCceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHh
Confidence 69999999999888899999999999999999999999999999999999974 8999999997652
Q ss_pred ---cceecccccccCCCCCCHHHHHHHhhhh---c----cHHHHHHHHhhCCCCh---hhhccCcCCCCHHHHHHHHHHH
Q 006275 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED---W----RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCK 556 (652)
Q Consensus 490 ---~~~~~~~~~~~~~~~~tv~e~~~~~~~~---~----~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqrqrv~LAr 556 (652)
.++.+|. ..++. .|+.+|+...... . ....+.++++.+++.. ...++++.+||||||||++|||
T Consensus 83 ~~~i~~~~q~--~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~la~ 159 (250)
T PRK14262 83 RKKVGMVFQK--PTPFP-MSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKSELNKPGTRLSGGQQQRLCIAR 159 (250)
T ss_pred hhhEEEEecC--CccCc-ccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHHHHhCChhhcCHHHHHHHHHHH
Confidence 1233443 23444 8999999764321 1 1223567788888742 2468899999999999999999
Q ss_pred HHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||+.+|++|||||||++||+.++..+.++|.++ +.|||+||||++++..+||++++|++|++.. .|+.++..+
T Consensus 160 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~ 234 (250)
T PRK14262 160 ALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIE-YGPTREIVE 234 (250)
T ss_pred HHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ecCHHHHHh
Confidence 999999999999999999999999999999876 3599999999999999999999999999974 577776544
No 449
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-38 Score=335.73 Aligned_cols=209 Identities=28% Similarity=0.419 Sum_probs=175.4
Q ss_pred CCCCCcEEEEEeeeeEeC--CeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCeeEEEECceecc-
Q 006275 418 GRSGRSVVTIKNLEFGYE--DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL- 489 (652)
Q Consensus 418 ~~~~~~~i~~~~v~~~y~--~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~- 489 (652)
.|+..++|+++|++++|. .+++|+|+||+|++||++||+||||||||||+++|+|+.+ |++|+|.++|.++.
T Consensus 74 ~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~ 153 (329)
T PRK14257 74 DFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRS 153 (329)
T ss_pred CCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccc
Confidence 467778899999999995 3579999999999999999999999999999999999986 57999999998863
Q ss_pred -----------cceecccccccCCCCCCHHHHHHHhhhh--cc-H----HHHHHHHhhCCCCh---hhhccCcCCCCHHH
Q 006275 490 -----------PNYFEQNQAEALDLDKTVLETVAEAAED--WR-I----DDIKGLLGRCNFKA---DMLDRKVSLLSGGE 548 (652)
Q Consensus 490 -----------~~~~~~~~~~~~~~~~tv~e~~~~~~~~--~~-~----~~~~~~L~~~~l~~---~~~~~~~~~LSgGq 548 (652)
.+|++|.+ . .+..|+++|+.+.... .. . ..+..+++.+++.. ...++++.+|||||
T Consensus 154 ~~~~~~~lr~~i~~v~q~~--~-~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~~~~LSgGq 230 (329)
T PRK14257 154 KKISSLELRTRIGMVFQKP--T-PFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVKDDLDKAGNALSGGQ 230 (329)
T ss_pred cccchHhhhccEEEEecCC--c-cCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhhhhhhCCcccCCHHH
Confidence 12444432 2 3468999999864321 11 1 12566788887632 34578899999999
Q ss_pred HHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChh
Q 006275 549 KARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYN 626 (652)
Q Consensus 549 rqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~ 626 (652)
||||+|||||+.+|+||||||||++||+.+...+.+.|+++. .|||+|||+++++.++||||++|++|++.+ .|+++
T Consensus 231 kqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e-~g~~~ 309 (329)
T PRK14257 231 QQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEE-AGETK 309 (329)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHH
Confidence 999999999999999999999999999999999999998763 699999999999999999999999999985 58888
Q ss_pred hHhh
Q 006275 627 VCFT 630 (652)
Q Consensus 627 ~~~~ 630 (652)
+...
T Consensus 310 ~l~~ 313 (329)
T PRK14257 310 TIFI 313 (329)
T ss_pred HHhc
Confidence 8764
No 450
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-38 Score=329.05 Aligned_cols=205 Identities=25% Similarity=0.407 Sum_probs=172.7
Q ss_pred CcEEEEEeeeeEeCC--eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------
Q 006275 422 RSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~--~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------- 489 (652)
.++|+++|++++|++ +.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 5 ~~~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (269)
T PRK13648 5 NSIIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKH 84 (269)
T ss_pred CceEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhh
Confidence 346999999999975 45999999999999999999999999999999999999999999999998752
Q ss_pred cceecccccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCC
Q 006275 490 PNYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (652)
Q Consensus 490 ~~~~~~~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~ 563 (652)
.+|++|+.. ..++..++.+|+.+.... .....+.++++.+++. +..++++.+||||||||++|||||+.+|+
T Consensus 85 i~~v~q~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~ 162 (269)
T PRK13648 85 IGIVFQNPD-NQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDML-ERADYEPNALSGGQKQRVAIAGVLALNPS 162 (269)
T ss_pred eeEEEeChH-HhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCc-hhhhCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 134454421 235567889988764321 1123467889999985 67789999999999999999999999999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 564 LLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 564 lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
+|||||||++||+.++..+.+.|+++ +.|||+|||+++++.. |||+++|++|++.. .|++++..+
T Consensus 163 lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~-~d~i~~l~~G~i~~-~g~~~~~~~ 231 (269)
T PRK13648 163 VIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAME-ADHVIVMNKGTVYK-EGTPTEIFD 231 (269)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhc-CCEEEEEECCEEEE-ecCHHHHhc
Confidence 99999999999999999999999764 4599999999999986 99999999999974 577776544
No 451
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.3e-38 Score=316.73 Aligned_cols=195 Identities=27% Similarity=0.380 Sum_probs=152.2
Q ss_pred eEEEeEEEEeCCe-----eeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccCcc
Q 006275 98 VKLENISKSYKGV-----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEV 172 (652)
Q Consensus 98 i~v~~ls~~y~~~-----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~~~ 172 (652)
|+++|++++|++. ++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++| +|+|++|++.+
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g---~i~~~~q~~~l 77 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG---SIAYVSQEPWI 77 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC---EEEEEecCchh
Confidence 4789999999764 699999999999999999999999999999999999999999999986 79999999987
Q ss_pred CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCccc
Q 006275 173 SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADD 252 (652)
Q Consensus 173 ~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~ 252 (652)
+ ..|++||+....... . +......+. ..+...+... ..|+. ..
T Consensus 78 ~-~~t~~enl~~~~~~~--~----~~~~~~~~~---------------------------~~l~~~~~~~--~~~~~-~~ 120 (204)
T cd03250 78 Q-NGTIRENILFGKPFD--E----ERYEKVIKA---------------------------CALEPDLEIL--PDGDL-TE 120 (204)
T ss_pred c-cCcHHHHhccCCCcC--H----HHHHHHHHH---------------------------cCcHHHHHhc--cCccc-ce
Confidence 5 679999986321100 0 000000000 0001111110 11222 23
Q ss_pred ccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHH-HHc---cCCCeEEEEecCHHHHHhhcCeEEE
Q 006275 253 GDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEG-YLG---KQDVPMVIISHDRAFLDQLCTKIVE 328 (652)
Q Consensus 253 ~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~-~L~---~~g~tvIivsHd~~~l~~~~d~ii~ 328 (652)
.++.+.+||||||||++|||||+.+|++|||||||++||+.+++++.+ +++ +.+.|||++||+++.+.. ||++++
T Consensus 121 ~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~-~d~i~~ 199 (204)
T cd03250 121 IGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPH-ADQIVV 199 (204)
T ss_pred ecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhh-CCEEEE
Confidence 456689999999999999999999999999999999999999988876 443 347899999999999987 999999
Q ss_pred EcCCe
Q 006275 329 TEMGV 333 (652)
Q Consensus 329 l~~G~ 333 (652)
|++|+
T Consensus 200 l~~G~ 204 (204)
T cd03250 200 LDNGR 204 (204)
T ss_pred EeCCC
Confidence 99874
No 452
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-38 Score=323.55 Aligned_cols=203 Identities=25% Similarity=0.359 Sum_probs=169.8
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCC-----eeEEEECceecc--------
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR-----GGEVLLGEHNVL-------- 489 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~-----~G~i~~~g~~~~-------- 489 (652)
++|+++|++++|+++.+|+++||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++.
T Consensus 3 ~~l~~~~l~~~~~~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~ 82 (251)
T PRK14249 3 PKIKIRGVNFFYHKHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVN 82 (251)
T ss_pred ceEEEEEEEEEECCeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHH
Confidence 4699999999999888999999999999999999999999999999999999997 699999997652
Q ss_pred ----cceecccccccCCCCCCHHHHHHHhhhh---c----cHHHHHHHHhhCCCC---hhhhccCcCCCCHHHHHHHHHH
Q 006275 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED---W----RIDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFC 555 (652)
Q Consensus 490 ----~~~~~~~~~~~~~~~~tv~e~~~~~~~~---~----~~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqrqrv~LA 555 (652)
.+|++|+ ..+++ .|+.+|+...... . ....+.++++.+++. .+..++++.+||||||||++||
T Consensus 83 ~~~~i~~v~q~--~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~la 159 (251)
T PRK14249 83 LRKRVGMVFQQ--PNPFP-KSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKDNLHKSGLALSGGQQQRLCIA 159 (251)
T ss_pred hhceEEEEecC--CccCc-CcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhhHhhCCcccCCHHHHHHHHHH
Confidence 1244443 23444 5999999764321 1 113355567777763 2356889999999999999999
Q ss_pred HHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
|||+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+||++++|++|++.. .|+.++..
T Consensus 160 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 234 (251)
T PRK14249 160 RVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVE-YGRTGEIF 234 (251)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEE-eCCHHHHH
Confidence 9999999999999999999999999999999876 3699999999999999999999999999974 57776653
No 453
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-38 Score=332.28 Aligned_cols=224 Identities=20% Similarity=0.307 Sum_probs=172.3
Q ss_pred CCCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCC-----CCCcEEEECCCC--------
Q 006275 94 ISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN-------- 160 (652)
Q Consensus 94 ~~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~-----p~~G~i~~~~~~-------- 160 (652)
...+|+++|+++.|+++++|+++||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 42 ~~~~l~i~nl~~~~~~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~~ 121 (305)
T PRK14264 42 GDAKLSVEDLDVYYGDDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVNL 121 (305)
T ss_pred CCceEEEEEEEEEeCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccccH
Confidence 3456999999999998889999999999999999999999999999999999986 689999998732
Q ss_pred ----ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHH
Q 006275 161 ----MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLD 236 (652)
Q Consensus 161 ----~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (652)
..|+|++|++.+++ .||+||+...+..... ....+ ....+ ..-......
T Consensus 122 ~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~-------~~~~~---------~~~~~----------~~~~~~~~~ 174 (305)
T PRK14264 122 VELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGD-------INTGL---------LARLL----------GRDDKDAED 174 (305)
T ss_pred HHHhhceEEEccCCcccc-ccHHHHHHhHHhhccc-------ccccc---------ccccc----------ccCchHHHH
Confidence 25999999987655 5999998643210000 00000 00000 000001123
Q ss_pred HHHHHHhhhcCCCc---ccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEE
Q 006275 237 AKVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVI 311 (652)
Q Consensus 237 ~~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIi 311 (652)
..+.++++.+++.. ...++++.+|||||||||+|||||+.+|+||||||||+|||+.++..+.++|++ .+.|||+
T Consensus 175 ~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiii 254 (305)
T PRK14264 175 ELVERSLRQAALWDEVNDRLDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVV 254 (305)
T ss_pred HHHHHHHHHcCCchhhhHHhcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEE
Confidence 44566777777631 345778899999999999999999999999999999999999999999988753 2589999
Q ss_pred EecCHHHHHhhcCeE-EEEcCCeEEEecCChHHHH
Q 006275 312 ISHDRAFLDQLCTKI-VETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 312 vsHd~~~l~~~~d~i-i~l~~G~~~~~~g~~~~~~ 345 (652)
|||+++++..+||++ ++|++|++. ..|+.+++.
T Consensus 255 vtH~~~~i~~~~d~i~~~l~~G~i~-~~g~~~~~~ 288 (305)
T PRK14264 255 VTHNMQQAARISDQTAVFLTGGELV-EYDDTDKIF 288 (305)
T ss_pred EEcCHHHHHHhcCEEEEEecCCEEE-EeCCHHHHH
Confidence 999999999999997 567999884 567766543
No 454
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1e-38 Score=318.24 Aligned_cols=189 Identities=21% Similarity=0.308 Sum_probs=161.3
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-------ceEEEEecc
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------MKIAFLSQE 169 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-------~~i~~v~Q~ 169 (652)
+|+++|+++.|+++.+|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|++|.
T Consensus 2 ~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 81 (207)
T PRK13539 2 MLEGEDLACVRGGRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDDPDVAEACHYLGHR 81 (207)
T ss_pred EEEEEeEEEEECCeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcchhhHhhcEEecCC
Confidence 4899999999988889999999999999999999999999999999999999999999998743 258999998
Q ss_pred CccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCC
Q 006275 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (652)
Q Consensus 170 ~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (652)
+.+++..|+.+|+..... + .. ..++++.++++.+|+.
T Consensus 82 ~~~~~~~tv~~~l~~~~~---------------~--------------------------~~--~~~~~~~~~l~~~~l~ 118 (207)
T PRK13539 82 NAMKPALTVAENLEFWAA---------------F--------------------------LG--GEELDIAAALEAVGLA 118 (207)
T ss_pred CcCCCCCcHHHHHHHHHH---------------h--------------------------cC--CcHHHHHHHHHHcCCH
Confidence 777778899999742100 0 00 0012356778888886
Q ss_pred cccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcCeE
Q 006275 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCTKI 326 (652)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~~d~i 326 (652)
+..++++.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|++ .|+|||++||+++++.. |++
T Consensus 119 -~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~--~~~ 195 (207)
T PRK13539 119 -PLAHLPFGYLSAGQKRRVALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG--ARE 195 (207)
T ss_pred -HHHcCChhhcCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc--CcE
Confidence 466888999999999999999999999999999999999999999999888753 58999999999999976 999
Q ss_pred EEEcC
Q 006275 327 VETEM 331 (652)
Q Consensus 327 i~l~~ 331 (652)
+.++.
T Consensus 196 ~~~~~ 200 (207)
T PRK13539 196 LDLGP 200 (207)
T ss_pred EeecC
Confidence 88754
No 455
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=1.4e-38 Score=315.84 Aligned_cols=186 Identities=28% Similarity=0.467 Sum_probs=162.9
Q ss_pred EEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------cceecc
Q 006275 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYFEQ 495 (652)
Q Consensus 425 i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~~~~~ 495 (652)
|+++|+++.|+++.+|+++||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++. .+|+.|
T Consensus 1 l~i~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 80 (201)
T cd03231 1 LEADELTCERDGRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQRDSIARGLLYLGH 80 (201)
T ss_pred CEEEEEEEEeCCceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccccHHhhhheEEecc
Confidence 47899999999889999999999999999999999999999999999999999999999997652 123333
Q ss_pred cccccCCCCCCHHHHHHHhhhhccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCC
Q 006275 496 NQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 575 (652)
Q Consensus 496 ~~~~~~~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD 575 (652)
...+.+..|+.+|+...........+.++++.+++. ...++++.+||||||||++|||||+.+|++|||||||++||
T Consensus 81 --~~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD 157 (201)
T cd03231 81 --APGIKTTLSVLENLRFWHADHSDEQVEEALARVGLN-GFEDRPVAQLSAGQQRRVALARLLLSGRPLWILDEPTTALD 157 (201)
T ss_pred --ccccCCCcCHHHHHHhhcccccHHHHHHHHHHcCCh-hhhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCC
Confidence 234556789999997754333445678899999995 56789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEE
Q 006275 576 IPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEV 613 (652)
Q Consensus 576 ~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l 613 (652)
+.+++.+.+.|.++ +.|+|+||||...+..+|++++++
T Consensus 158 ~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 158 KAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 99999999999765 569999999999999999999887
No 456
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-38 Score=323.05 Aligned_cols=205 Identities=25% Similarity=0.348 Sum_probs=169.6
Q ss_pred CcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC--C---CeeEEEECceecc-------
Q 006275 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK--P---RGGEVLLGEHNVL------- 489 (652)
Q Consensus 422 ~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~--p---~~G~i~~~g~~~~------- 489 (652)
+.+|+++||+++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+.+ | ++|+|.++|.++.
T Consensus 3 ~~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 3 KKIITSSDVHLFYGKFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred cceEEEEeEEEEECCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 457999999999998889999999999999999999999999999999999975 5 5899999997652
Q ss_pred -----cceecccccccCCCCCCHHHHHHHhhhhc---c----HHHHHHHHhhCCCC---hhhhccCcCCCCHHHHHHHHH
Q 006275 490 -----PNYFEQNQAEALDLDKTVLETVAEAAEDW---R----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAF 554 (652)
Q Consensus 490 -----~~~~~~~~~~~~~~~~tv~e~~~~~~~~~---~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqrqrv~L 554 (652)
.+|+.|. ..+++ .|+.+|+....... . .+.+.+.++.+++. .+..++.+.+||||||||++|
T Consensus 83 ~~~~~i~~~~q~--~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~Gq~qrv~l 159 (252)
T PRK14255 83 QLRKQVGMVFQQ--PNPFP-FSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVKDHLHESALSLSGGQQQRVCI 159 (252)
T ss_pred HhcCeEEEEECC--CccCC-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchhhHHhcCcccCCHHHHHHHHH
Confidence 1244443 23444 69999997643211 1 23355667777653 235678999999999999999
Q ss_pred HHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
||||+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++.++||+|++|++|++.. .|+..+...
T Consensus 160 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~~ 236 (252)
T PRK14255 160 ARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIE-FADTKQMFL 236 (252)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEE-eCCHHHHhc
Confidence 99999999999999999999999999999999876 3699999999999999999999999999985 466655543
No 457
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.1e-38 Score=316.15 Aligned_cols=184 Identities=21% Similarity=0.325 Sum_probs=157.6
Q ss_pred eEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------ceEEEEec
Q 006275 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLSQ 168 (652)
Q Consensus 98 i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------~~i~~v~Q 168 (652)
|+++|++++|+++++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|
T Consensus 2 l~~~~l~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~i~~~~q 81 (200)
T PRK13540 2 LDVIELDFDYHDQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKKDLCTYQKQLCFVGH 81 (200)
T ss_pred EEEEEEEEEeCCeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCccccCHHHHHhheEEecc
Confidence 789999999998889999999999999999999999999999999999999999999998753 25999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCC
Q 006275 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (652)
Q Consensus 169 ~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (652)
++.+++..||++|+...... . ..+..+.++++.+++
T Consensus 82 ~~~~~~~~tv~~~~~~~~~~------------------------------------------~--~~~~~~~~~l~~~~l 117 (200)
T PRK13540 82 RSGINPYLTLRENCLYDIHF------------------------------------------S--PGAVGITELCRLFSL 117 (200)
T ss_pred ccccCcCCCHHHHHHHHHhc------------------------------------------C--cchHHHHHHHHHcCC
Confidence 98877789999997521100 0 001234567777887
Q ss_pred CcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcCe
Q 006275 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCTK 325 (652)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~~d~ 325 (652)
. +..++++.+||||||||++||||++.+|++|||||||+|||+.+++++.++|++ .+.|||++||+.+++.. ||+
T Consensus 118 ~-~~~~~~~~~LS~G~~~rv~laral~~~p~~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~-~d~ 195 (200)
T PRK13540 118 E-HLIDYPCGLLSSGQKRQVALLRLWMSKAKLWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNK-ADY 195 (200)
T ss_pred c-hhhhCChhhcCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccc-cch
Confidence 5 456788899999999999999999999999999999999999999999988753 58899999999999955 776
Q ss_pred EE
Q 006275 326 IV 327 (652)
Q Consensus 326 ii 327 (652)
-+
T Consensus 196 ~~ 197 (200)
T PRK13540 196 EE 197 (200)
T ss_pred hh
Confidence 44
No 458
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=7.1e-39 Score=326.10 Aligned_cols=207 Identities=24% Similarity=0.401 Sum_probs=161.5
Q ss_pred eEEEeEEEEeCC---eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEE
Q 006275 98 VKLENISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIA 164 (652)
Q Consensus 98 i~v~~ls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~ 164 (652)
|+++|+++.|++ +++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 478999999964 469999999999999999999999999999999999999999999998732 2599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhh
Q 006275 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (652)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (652)
|++|++.++. .|++||+....... . . +.+....+ ... +.+++.
T Consensus 81 ~~~q~~~~~~-~tv~e~l~~~~~~~-~-~---~~~~~~~~---------------------------~~~----~~~~~~ 123 (238)
T cd03249 81 LVSQEPVLFD-GTIAENIRYGKPDA-T-D---EEVEEAAK---------------------------KAN----IHDFIM 123 (238)
T ss_pred EECCchhhhh-hhHHHHhhccCCCC-C-H---HHHHHHHH---------------------------HcC----hHHHHH
Confidence 9999987654 69999985321100 0 0 00000000 000 112222
Q ss_pred hc--CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHH
Q 006275 245 EL--GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLD 320 (652)
Q Consensus 245 ~l--gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~ 320 (652)
.+ |+. ...++.+.+|||||||||+|||||+.+|++|||||||+|||+.+++.+.++|++ .|+|||++||+++++.
T Consensus 124 ~l~~~~~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~ 202 (238)
T cd03249 124 SLPDGYD-TLVGERGSQLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIR 202 (238)
T ss_pred hhccccc-eeeccCCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHh
Confidence 22 332 345677899999999999999999999999999999999999999999988743 5789999999999996
Q ss_pred hhcCeEEEEcCCeEEEecCChHHH
Q 006275 321 QLCTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 321 ~~~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
.||++++|++|++ .+.|+.+++
T Consensus 203 -~~d~v~~l~~G~i-~~~~~~~~~ 224 (238)
T cd03249 203 -NADLIAVLQNGQV-VEQGTHDEL 224 (238)
T ss_pred -hCCEEEEEECCEE-EEeCCHHHH
Confidence 8999999999997 466765544
No 459
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.7e-38 Score=323.13 Aligned_cols=201 Identities=24% Similarity=0.463 Sum_probs=163.6
Q ss_pred EEEEeeeeEeCC--eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------cce
Q 006275 425 VTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNY 492 (652)
Q Consensus 425 i~~~~v~~~y~~--~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~ 492 (652)
|+++|++++|++ +++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 478999999963 57999999999999999999999999999999999999999999999997652 235
Q ss_pred ecccccccCCCCCCHHHHHHHhhhhccHHHH---------HHHHhhC--CCChhhhccCcCCCCHHHHHHHHHHHHHccC
Q 006275 493 FEQNQAEALDLDKTVLETVAEAAEDWRIDDI---------KGLLGRC--NFKADMLDRKVSLLSGGEKARLAFCKFMVKP 561 (652)
Q Consensus 493 ~~~~~~~~~~~~~tv~e~~~~~~~~~~~~~~---------~~~L~~~--~l~~~~~~~~~~~LSgGqrqrv~LAral~~~ 561 (652)
++|+. .+ +..|+.+|+...........+ .+.+..+ ++. ...++++.+|||||||||+|||||+.+
T Consensus 81 ~~q~~--~~-~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~-~~~~~~~~~LSgG~~qrv~laral~~~ 156 (237)
T cd03252 81 VLQEN--VL-FNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYD-TIVGEQGAGLSGGQRQRIAIARALIHN 156 (237)
T ss_pred EcCCc--hh-ccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCccccc-chhhcCCCcCCHHHHHHHHHHHHHhhC
Confidence 55543 33 357999999764321112222 2333333 332 335678899999999999999999999
Q ss_pred CCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 562 STLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 562 p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
|++|||||||++||+.++..+.+.|+++ +.|||++|||++++. .||++++|++|++. ..|+++++.+.
T Consensus 157 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~-~~~~~~~~~~~ 226 (237)
T cd03252 157 PRILIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVK-NADRIIVMEKGRIV-EQGSHDELLAE 226 (237)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHH-hCCEEEEEECCEEE-EEcCHHHHHhc
Confidence 9999999999999999999999999875 359999999999996 59999999999997 45777776654
No 460
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-38 Score=328.71 Aligned_cols=203 Identities=29% Similarity=0.383 Sum_probs=172.2
Q ss_pred EEEEEeeeeEeCC---eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------c
Q 006275 424 VVTIKNLEFGYED---RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------P 490 (652)
Q Consensus 424 ~i~~~~v~~~y~~---~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~ 490 (652)
+|+++||+++|++ .++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 6999999999974 35999999999999999999999999999999999999999999999998753 2
Q ss_pred ceecccccccCCCCCCHHHHHHHhhhh--cc----HHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCe
Q 006275 491 NYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (652)
Q Consensus 491 ~~~~~~~~~~~~~~~tv~e~~~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~l 564 (652)
+|++|+.. ...+..|+.+|+...... .. .+.+..+++.+++. +..++++.+||||||||++|||||+.+|++
T Consensus 84 ~~v~q~~~-~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~lAraL~~~p~l 161 (277)
T PRK13642 84 GMVFQNPD-NQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNML-DFKTREPARLSGGQKQRVAVAGIIALRPEI 161 (277)
T ss_pred EEEEECHH-HhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCH-hHhhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 35555421 235568999999764321 11 23467889999984 678999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 565 LVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 565 LlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
|||||||++||+.++..+.++|.++ +.|||+||||++++. .||++++|++|++.. .|+++++..
T Consensus 162 lllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~-~~d~i~~l~~G~i~~-~g~~~~~~~ 229 (277)
T PRK13642 162 IILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAA-SSDRILVMKAGEIIK-EAAPSELFA 229 (277)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH-hCCEEEEEECCEEEE-eCCHHHHhc
Confidence 9999999999999999999998754 569999999999997 599999999999874 577776654
No 461
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.3e-38 Score=329.78 Aligned_cols=198 Identities=22% Similarity=0.384 Sum_probs=159.5
Q ss_pred eEEEeEEEEeC--CeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEEE
Q 006275 98 VKLENISKSYK--GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (652)
Q Consensus 98 i~v~~ls~~y~--~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~~ 165 (652)
|+++|++++|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++ ++|+|.++|.+ ..|+|
T Consensus 3 i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i~~ 81 (275)
T cd03289 3 MTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAFGV 81 (275)
T ss_pred EEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhEEE
Confidence 89999999994 4679999999999999999999999999999999999998 78999998843 25999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh
Q 006275 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (652)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (652)
++|++.+++ .|+++|+.. +.. .. .+++.++++.
T Consensus 82 v~q~~~lf~-~tv~~nl~~-~~~-~~--------------------------------------------~~~~~~~l~~ 114 (275)
T cd03289 82 IPQKVFIFS-GTFRKNLDP-YGK-WS--------------------------------------------DEEIWKVAEE 114 (275)
T ss_pred ECCCcccch-hhHHHHhhh-ccC-CC--------------------------------------------HHHHHHHHHH
Confidence 999998864 699999841 100 00 0011112222
Q ss_pred cCCCcccccC-----------CCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 006275 246 LGFTADDGDR-----------LVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (652)
Q Consensus 246 lgl~~~~~~~-----------~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIiv 312 (652)
+|+. ...++ ....||||||||++|||||+.+|+||||||||++||+.++..+.+.|++ .++|||+|
T Consensus 115 ~gL~-~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~i 193 (275)
T cd03289 115 VGLK-SVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILS 193 (275)
T ss_pred cCCH-HHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 2322 11222 2456999999999999999999999999999999999999999988863 47899999
Q ss_pred ecCHHHHHhhcCeEEEEcCCeEEEecCChHHHHH
Q 006275 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVL 346 (652)
Q Consensus 313 sHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~~ 346 (652)
||+++++.. ||||++|++|++. +.|++.+++.
T Consensus 194 sH~~~~i~~-~dri~vl~~G~i~-~~g~~~~l~~ 225 (275)
T cd03289 194 EHRIEAMLE-CQRFLVIEENKVR-QYDSIQKLLN 225 (275)
T ss_pred ECCHHHHHh-CCEEEEecCCeEe-ecCCHHHHhh
Confidence 999999965 9999999999984 6688777655
No 462
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-38 Score=326.60 Aligned_cols=206 Identities=28% Similarity=0.375 Sum_probs=172.3
Q ss_pred CCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCeeEEEECceeccc-----
Q 006275 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVLP----- 490 (652)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~~----- 490 (652)
..++|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 22 ~~~~l~~~nl~~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~ 101 (272)
T PRK14236 22 EQTALEVRNLNLFYGDKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDV 101 (272)
T ss_pred CCcEEEEEEEEEEECCeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCH
Confidence 3457999999999988899999999999999999999999999999999999987 489999999977521
Q ss_pred -------ceecccccccCCCCCCHHHHHHHhhhh----c---cHHHHHHHHhhCCCCh---hhhccCcCCCCHHHHHHHH
Q 006275 491 -------NYFEQNQAEALDLDKTVLETVAEAAED----W---RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLA 553 (652)
Q Consensus 491 -------~~~~~~~~~~~~~~~tv~e~~~~~~~~----~---~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqrqrv~ 553 (652)
+|++|. ..+++ .|+.+|+...... . ....+.++++.+++.. ...++.+.+||||||||++
T Consensus 102 ~~~~~~i~~v~q~--~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~ 178 (272)
T PRK14236 102 AELRRRVGMVFQR--PNPFP-KSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKDRLHENAFGLSGGQQQRLV 178 (272)
T ss_pred HHHhccEEEEecC--CccCc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHHHhhCCcccCCHHHHHHHH
Confidence 234443 23444 4999999764221 1 1234667788888742 3567889999999999999
Q ss_pred HHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 554 FCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 554 LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+|||+++++..+|||+++|++|++.. .|+.+++..
T Consensus 179 laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~ 256 (272)
T PRK14236 179 IARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVE-YGDTDTLFT 256 (272)
T ss_pred HHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEe-cCCHHHHhc
Confidence 999999999999999999999999999999999876 3699999999999999999999999999974 577776653
No 463
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.1e-38 Score=371.83 Aligned_cols=212 Identities=24% Similarity=0.422 Sum_probs=170.0
Q ss_pred CceEEEeEEEEeCC--eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceE
Q 006275 96 SGVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKI 163 (652)
Q Consensus 96 ~~i~v~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i 163 (652)
..|+++|++|+|++ +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.+ ..|
T Consensus 450 ~~I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i 529 (686)
T TIGR03797 450 GAIEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQL 529 (686)
T ss_pred ceEEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhcc
Confidence 35999999999953 569999999999999999999999999999999999999999999999854 269
Q ss_pred EEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHh
Q 006275 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (652)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (652)
|||+|++.+ ++.|++||+..+-. .. .+++.++++.+ .+.+.+..+
T Consensus 530 ~~v~Q~~~l-f~gTI~eNi~~~~~--~~----~e~i~~al~~a---------------------------~l~~~i~~l- 574 (686)
T TIGR03797 530 GVVLQNGRL-MSGSIFENIAGGAP--LT----LDEAWEAARMA---------------------------GLAEDIRAM- 574 (686)
T ss_pred EEEccCCcc-CcccHHHHHhcCCC--CC----HHHHHHHHHHc---------------------------CcHHHHHhc-
Confidence 999999987 67899999964211 00 01122222211 111122211
Q ss_pred hhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhc
Q 006275 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLC 323 (652)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~ 323 (652)
..|+.+..++ ...+||||||||++|||||+++|+|||||||||+||+++.+.+.+.|++.++|+|+|||+++.+. .|
T Consensus 575 -p~G~dt~ige-~G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~~~T~IiItHr~~~i~-~~ 651 (686)
T TIGR03797 575 -PMGMHTVISE-GGGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERLKVTRIVIAHRLSTIR-NA 651 (686)
T ss_pred -cccccccccC-CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHhCCeEEEEecChHHHH-cC
Confidence 1244433333 36889999999999999999999999999999999999999999999877899999999999995 59
Q ss_pred CeEEEEcCCeEEEecCChHHHHH
Q 006275 324 TKIVETEMGVSRTYEGNYSQYVL 346 (652)
Q Consensus 324 d~ii~l~~G~~~~~~g~~~~~~~ 346 (652)
|+|++|++|++ ...|++++++.
T Consensus 652 D~Iivl~~G~i-v~~G~~~~Ll~ 673 (686)
T TIGR03797 652 DRIYVLDAGRV-VQQGTYDELMA 673 (686)
T ss_pred CEEEEEECCEE-EEECCHHHHHh
Confidence 99999999998 47899887654
No 464
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=9e-39 Score=373.94 Aligned_cols=213 Identities=23% Similarity=0.394 Sum_probs=170.1
Q ss_pred CceEEEeEEEEeCC--eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceE
Q 006275 96 SGVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKI 163 (652)
Q Consensus 96 ~~i~v~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i 163 (652)
..|+++|++|+|++ +++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.++|.+ ..|
T Consensus 476 ~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i 555 (710)
T TIGR03796 476 GYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSV 555 (710)
T ss_pred CeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhhe
Confidence 45999999999974 569999999999999999999999999999999999999999999999854 369
Q ss_pred EEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHh
Q 006275 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (652)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (652)
+||+|++++ ++.|++||+...-.+ .. .+++.++++.++ +.+.+..+
T Consensus 556 ~~v~Q~~~l-f~gTi~eNi~l~~~~-~~----~~~i~~al~~~~---------------------------l~~~i~~l- 601 (710)
T TIGR03796 556 AMVDQDIFL-FEGTVRDNLTLWDPT-IP----DADLVRACKDAA---------------------------IHDVITSR- 601 (710)
T ss_pred eEEecCChh-hhccHHHHhhCCCCC-CC----HHHHHHHHHHhC---------------------------CHHHHHhC-
Confidence 999999987 678999999632110 00 011222222111 11111111
Q ss_pred hhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhc
Q 006275 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLC 323 (652)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~ 323 (652)
..|+.+...+ ...+||||||||++|||||+++|+|||||||||+||+++++.+.+.|++.++|+|+|||+++.+. .|
T Consensus 602 -p~gl~t~i~e-~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~~~~T~IiitHrl~~i~-~~ 678 (710)
T TIGR03796 602 -PGGYDAELAE-GGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRRRGCTCIIVAHRLSTIR-DC 678 (710)
T ss_pred -cCcccceecc-CCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hC
Confidence 1144443333 36889999999999999999999999999999999999999999999888999999999999995 59
Q ss_pred CeEEEEcCCeEEEecCChHHHHH
Q 006275 324 TKIVETEMGVSRTYEGNYSQYVL 346 (652)
Q Consensus 324 d~ii~l~~G~~~~~~g~~~~~~~ 346 (652)
|+|++|++|++ ...|++++++.
T Consensus 679 D~Iivl~~G~i-~~~G~~~~Ll~ 700 (710)
T TIGR03796 679 DEIIVLERGKV-VQRGTHEELWA 700 (710)
T ss_pred CEEEEEeCCEE-EEecCHHHHHH
Confidence 99999999998 47798887654
No 465
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.3e-38 Score=358.03 Aligned_cols=200 Identities=24% Similarity=0.352 Sum_probs=172.7
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-----------cc
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PN 491 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~ 491 (652)
++|+++|++++|+++.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 3 ~~i~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 82 (501)
T PRK10762 3 ALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGIG 82 (501)
T ss_pred ceEEEeeeEEEeCCeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCEE
Confidence 4799999999999889999999999999999999999999999999999999999999999997652 13
Q ss_pred eecccccccCCCCCCHHHHHHHhhhh--------cc--HHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccC
Q 006275 492 YFEQNQAEALDLDKTVLETVAEAAED--------WR--IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKP 561 (652)
Q Consensus 492 ~~~~~~~~~~~~~~tv~e~~~~~~~~--------~~--~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~ 561 (652)
|++|+ ..+.+.+|+.+|+.+.... +. ...+.++++.+++. +..++++.+|||||||||+|||||+.+
T Consensus 83 ~v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~ 159 (501)
T PRK10762 83 IIHQE--LNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLR-FSSDKLVGELSIGEQQMVEIAKVLSFE 159 (501)
T ss_pred EEEcc--hhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCC-CCccCchhhCCHHHHHHHHHHHHHhcC
Confidence 45554 3466788999999764210 11 23467889999995 567899999999999999999999999
Q ss_pred CCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChh
Q 006275 562 STLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYN 626 (652)
Q Consensus 562 p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~ 626 (652)
|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+||+|++|++|++.. .|..+
T Consensus 160 p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~-~~~~~ 226 (501)
T PRK10762 160 SKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIA-EREVA 226 (501)
T ss_pred CCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEE-ecCcC
Confidence 9999999999999999999999988764 4699999999999999999999999999874 34443
No 466
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=2.1e-38 Score=322.26 Aligned_cols=186 Identities=28% Similarity=0.380 Sum_probs=158.4
Q ss_pred eEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---------cceecccccccCC
Q 006275 432 FGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYFEQNQAEALD 502 (652)
Q Consensus 432 ~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~~~~~~~~~~~~ 502 (652)
+.|+.+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|+.+. ...++
T Consensus 29 ~~~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 107 (236)
T cd03267 29 RKYREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKRRKKFLRRIGVVFGQ-KTQLW 107 (236)
T ss_pred cccCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEccccchhhcccEEEEcCC-ccccC
Confidence 5567778999999999999999999999999999999999999999999999987642 1233321 23455
Q ss_pred CCCCHHHHHHHhhhh--c----cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCH
Q 006275 503 LDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 576 (652)
Q Consensus 503 ~~~tv~e~~~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~ 576 (652)
+..|+.+++...... . ....+.++++.+++. +..++++.+||||||||++|||||+.+|++|||||||++||+
T Consensus 108 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~ 186 (236)
T cd03267 108 WDLPVIDSFYLLAAIYDLPPARFKKRLDELSELLDLE-ELLDTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDV 186 (236)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCH
Confidence 678999998654321 1 123466788999984 567899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEE
Q 006275 577 PSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQ 619 (652)
Q Consensus 577 ~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~ 619 (652)
.+++.+.++|.++ +.|||+||||++++..+||++++|++|++.
T Consensus 187 ~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 233 (236)
T cd03267 187 VAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLL 233 (236)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEE
Confidence 9999999999875 459999999999999999999999999986
No 467
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-38 Score=324.54 Aligned_cols=203 Identities=26% Similarity=0.367 Sum_probs=170.5
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCC-----eeEEEECceecc---------
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR-----GGEVLLGEHNVL--------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~-----~G~i~~~g~~~~--------- 489 (652)
+|+++|++++|+++.+|+|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.
T Consensus 7 ~l~~~nl~~~~~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~~~ 86 (261)
T PRK14258 7 AIKVNNLSFYYDTQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLNRL 86 (261)
T ss_pred eEEEeeEEEEeCCeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchHHh
Confidence 599999999998888999999999999999999999999999999999999985 899999997652
Q ss_pred ---cceecccccccCCCCCCHHHHHHHhhhh------cc-HHHHHHHHhhCCCCh---hhhccCcCCCCHHHHHHHHHHH
Q 006275 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED------WR-IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCK 556 (652)
Q Consensus 490 ---~~~~~~~~~~~~~~~~tv~e~~~~~~~~------~~-~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqrqrv~LAr 556 (652)
.++++|+ ..+++ .|+.+|+...... .. ...+.++++.+++.. ...++++.+||||||||++|||
T Consensus 87 ~~~i~~~~q~--~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~lar 163 (261)
T PRK14258 87 RRQVSMVHPK--PNLFP-MSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHKIHKSALDLSGGQQQRLCIAR 163 (261)
T ss_pred hccEEEEecC--CccCc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHHHH
Confidence 1123333 23444 8999999764211 11 234567888888732 3568899999999999999999
Q ss_pred HHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeC-----CEEEeecCChhh
Q 006275 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKG-----SNLQDYAGDYNV 627 (652)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~-----g~i~~~~g~~~~ 627 (652)
||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++||||++|++ |+++ ..|++++
T Consensus 164 al~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~-~~~~~~~ 242 (261)
T PRK14258 164 ALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV-EFGLTKK 242 (261)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE-EeCCHHH
Confidence 999999999999999999999999999998763 56999999999999999999999998 9987 4588887
Q ss_pred Hhh
Q 006275 628 CFT 630 (652)
Q Consensus 628 ~~~ 630 (652)
..+
T Consensus 243 ~~~ 245 (261)
T PRK14258 243 IFN 245 (261)
T ss_pred HHh
Confidence 654
No 468
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-38 Score=326.26 Aligned_cols=207 Identities=26% Similarity=0.341 Sum_probs=171.9
Q ss_pred CCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCC-----CeeEEEECceecc------
Q 006275 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL------ 489 (652)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~------ 489 (652)
..++|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 17 ~~~~l~~~nl~~~~~~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 17 DHSVFEVEGVKVFYGGFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred CCceEEEeeEEEEeCCeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 44579999999999988899999999999999999999999999999999999863 6899999997652
Q ss_pred ------cceecccccccCCCCCCHHHHHHHhhhhc-----cHHHHHHHHhhCCCC---hhhhccCcCCCCHHHHHHHHHH
Q 006275 490 ------PNYFEQNQAEALDLDKTVLETVAEAAEDW-----RIDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFC 555 (652)
Q Consensus 490 ------~~~~~~~~~~~~~~~~tv~e~~~~~~~~~-----~~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqrqrv~LA 555 (652)
.+|++|+. .+++ .|+.+|+....... ....+.+.++.+++. .+..++++.+|||||||||+||
T Consensus 97 ~~~~~~i~~v~q~~--~l~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~LA 173 (274)
T PRK14265 97 VKLRRQVGMVFQRP--NPFP-KSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKDKLKEKGTALSGGQQQRLCIA 173 (274)
T ss_pred HHHhhcEEEEccCC--cccc-ccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHHHhcCCcccCCHHHHHHHHHH
Confidence 12444442 3343 59999997643211 123355667777763 2356789999999999999999
Q ss_pred HHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEe---------CCEEEeecCC
Q 006275 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVK---------GSNLQDYAGD 624 (652)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~---------~g~i~~~~g~ 624 (652)
|||+.+|++|||||||++||+.++..+.++|.++ +.|||+||||++++.++|||+++|+ +|++++ .|+
T Consensus 174 raL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~-~g~ 252 (274)
T PRK14265 174 RAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVE-FSP 252 (274)
T ss_pred HHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEE-eCC
Confidence 9999999999999999999999999999999876 3599999999999999999999997 799874 588
Q ss_pred hhhHhhh
Q 006275 625 YNVCFTS 631 (652)
Q Consensus 625 ~~~~~~~ 631 (652)
.++....
T Consensus 253 ~~~~~~~ 259 (274)
T PRK14265 253 TEQMFGS 259 (274)
T ss_pred HHHHHhC
Confidence 8877543
No 469
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.5e-38 Score=359.82 Aligned_cols=212 Identities=23% Similarity=0.402 Sum_probs=174.9
Q ss_pred CCceEEEeEEEEeC-----------CeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---
Q 006275 95 SSGVKLENISKSYK-----------GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--- 160 (652)
Q Consensus 95 ~~~i~v~~ls~~y~-----------~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~--- 160 (652)
.++|+++|++++|+ ++++|+++||+|++|++++|+||||||||||+++|+|+++ ++|+|.++|.+
T Consensus 273 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~-~~G~i~~~g~~i~~ 351 (529)
T PRK15134 273 SPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN-SQGEIWFDGQPLHN 351 (529)
T ss_pred CCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC-CCcEEEECCEEccc
Confidence 45799999999995 3569999999999999999999999999999999999985 89999998732
Q ss_pred ----------ceEEEEeccC--ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHH
Q 006275 161 ----------MKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQ 228 (652)
Q Consensus 161 ----------~~i~~v~Q~~--~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (652)
.+++|++|++ .+++..||.||+...+.. .. .
T Consensus 352 ~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~---------------~~----------------------~ 394 (529)
T PRK15134 352 LNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRV---------------HQ----------------------P 394 (529)
T ss_pred cchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHh---------------cc----------------------c
Confidence 2599999997 366678999998532100 00 0
Q ss_pred hCChhcHHHHHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc----c
Q 006275 229 AVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----K 304 (652)
Q Consensus 229 ~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~ 304 (652)
..+......++.++++.+|+..+..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++.+.++|+ +
T Consensus 395 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~ 474 (529)
T PRK15134 395 TLSAAQREQQVIAVMEEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQK 474 (529)
T ss_pred cCChHHHHHHHHHHHHHcCCCHHHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHh
Confidence 001112234567788899996446789999999999999999999999999999999999999999999998875 2
Q ss_pred CCCeEEEEecCHHHHHhhcCeEEEEcCCeEEEecCChHHHH
Q 006275 305 QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (652)
Q Consensus 305 ~g~tvIivsHd~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~ 345 (652)
.|+|||+||||++++..+||+|++|++|++ ...|+.+++.
T Consensus 475 ~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i-~~~~~~~~~~ 514 (529)
T PRK15134 475 HQLAYLFISHDLHVVRALCHQVIVLRQGEV-VEQGDCERVF 514 (529)
T ss_pred hCCEEEEEeCCHHHHHHhcCeEEEEECCEE-EEEcCHHHHh
Confidence 489999999999999999999999999997 4667765553
No 470
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-38 Score=321.35 Aligned_cols=201 Identities=25% Similarity=0.440 Sum_probs=164.8
Q ss_pred EEEEeeeeEeCCe--eeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------cce
Q 006275 425 VTIKNLEFGYEDR--LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNY 492 (652)
Q Consensus 425 i~~~~v~~~y~~~--~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~ 492 (652)
|+++|++++|+++ .+++++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4789999999865 7999999999999999999999999999999999999999999999997652 234
Q ss_pred ecccccccCCCCCCHHHHHHHhhhhccHHH---------HHHHHhhC--CCChhhhccCcCCCCHHHHHHHHHHHHHccC
Q 006275 493 FEQNQAEALDLDKTVLETVAEAAEDWRIDD---------IKGLLGRC--NFKADMLDRKVSLLSGGEKARLAFCKFMVKP 561 (652)
Q Consensus 493 ~~~~~~~~~~~~~tv~e~~~~~~~~~~~~~---------~~~~L~~~--~l~~~~~~~~~~~LSgGqrqrv~LAral~~~ 561 (652)
++|+. .++ ..|+.+|+........... +.+.++.+ ++. ...++++.+||||||||++|||||+.+
T Consensus 81 ~~q~~--~~~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~ 156 (234)
T cd03251 81 VSQDV--FLF-NDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYD-TVIGERGVKLSGGQRQRIAIARALLKD 156 (234)
T ss_pred eCCCC--eec-cccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcc-eeeccCCCcCCHHHHHHHHHHHHHhcC
Confidence 44442 333 4799999976532222122 23344444 443 345778899999999999999999999
Q ss_pred CCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 562 STLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 562 p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
|++|||||||++||+.+++.+.+.|+++ +.|||+||||++++.. ||++++|++|++. ..|+++++...
T Consensus 157 p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~d~v~~l~~G~i~-~~~~~~~~~~~ 226 (234)
T cd03251 157 PPILILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIEN-ADRIVVLEDGKIV-ERGTHEELLAQ 226 (234)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhh-CCEEEEecCCeEe-eeCCHHHHHHc
Confidence 9999999999999999999999999876 4599999999999976 9999999999997 46777776544
No 471
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.3e-38 Score=342.21 Aligned_cols=199 Identities=28% Similarity=0.318 Sum_probs=170.9
Q ss_pred eeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECce----ecc--------------c
Q 006275 429 NLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEH----NVL--------------P 490 (652)
Q Consensus 429 ~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~----~~~--------------~ 490 (652)
++.++|+...+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. ++. .
T Consensus 29 ~~~~~~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i 108 (382)
T TIGR03415 29 EILDETGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRV 108 (382)
T ss_pred HHHHhhCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCE
Confidence 4567788888999999999999999999999999999999999999999999999985 221 2
Q ss_pred ceecccccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCe
Q 006275 491 NYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (652)
Q Consensus 491 ~~~~~~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~l 564 (652)
+|++|. ..+++..|+.+|+.+.... .....+.++++.+|+. +..++++.+|||||||||+|||||+.+|+|
T Consensus 109 ~~vfQ~--~~l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~-~~~~~~~~~LSgGq~QRV~LARALa~~P~I 185 (382)
T TIGR03415 109 SMVFQK--FALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLA-QWADKKPGELSGGMQQRVGLARAFAMDADI 185 (382)
T ss_pred EEEECC--CcCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 344443 4567789999999875321 1234577899999995 678999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 565 LVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 565 LlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
|||||||++||+.++..+++.|.++ +.|||+||||++++.++||||++|++|++.. .|+++++...
T Consensus 186 LLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~-~g~~~ei~~~ 255 (382)
T TIGR03415 186 LLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQ-HGTPEEIVLN 255 (382)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ecCHHHHhhC
Confidence 9999999999999999999988754 5699999999999999999999999999974 5887776543
No 472
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.7e-38 Score=316.02 Aligned_cols=183 Identities=34% Similarity=0.485 Sum_probs=157.3
Q ss_pred EEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc--------------cce
Q 006275 427 IKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------------PNY 492 (652)
Q Consensus 427 ~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------------~~~ 492 (652)
++|+++.|+++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 1 i~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~ 80 (206)
T TIGR03608 1 LKNISKKFGDKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKLGY 80 (206)
T ss_pred CcceEEEECCEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCeeE
Confidence 468999999889999999999999999999999999999999999999999999999998731 123
Q ss_pred ecccccccCCCCCCHHHHHHHhhhh------ccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEE
Q 006275 493 FEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (652)
Q Consensus 493 ~~~~~~~~~~~~~tv~e~~~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLl 566 (652)
+.|. ..+++..|+.+|+...... ...+.+.++++.+++. ...++++.+||||||||++|||||+.+|++||
T Consensus 81 ~~q~--~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~lS~G~~qr~~laral~~~p~lll 157 (206)
T TIGR03608 81 LFQN--FALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLN-LKLKQKIYELSGGEQQRVALARAILKDPPLIL 157 (206)
T ss_pred Eecc--hhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCch-hhhcCChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 3333 3456678999999764321 1234577899999994 66799999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEE
Q 006275 567 LDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEV 613 (652)
Q Consensus 567 LDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l 613 (652)
|||||++||+.+++.+.++|+++ +.|||+|||+++++ .+||++++|
T Consensus 158 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~-~~~d~i~~l 206 (206)
T TIGR03608 158 ADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVA-KQADRVIEL 206 (206)
T ss_pred EeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH-hhcCEEEeC
Confidence 99999999999999999999865 46999999999977 579999875
No 473
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-38 Score=343.69 Aligned_cols=210 Identities=29% Similarity=0.411 Sum_probs=165.7
Q ss_pred eEEEeEEEEeCCe-eeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEEEE
Q 006275 98 VKLENISKSYKGV-TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (652)
Q Consensus 98 i~v~~ls~~y~~~-~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~~v 166 (652)
++++|+++.|++. ++++|+||++++|+.++|||+||||||||+++|+|+.+|++|+|.++|.+ .+++||
T Consensus 321 i~~~~l~~~y~~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v 400 (559)
T COG4988 321 ISLENLSFRYPDGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWV 400 (559)
T ss_pred eeecceEEecCCCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeee
Confidence 4455999999765 89999999999999999999999999999999999999999999999864 259999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh-
Q 006275 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE- 245 (652)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~- 245 (652)
+|+|.+ +..|++||+..+-.+. . -+++.++++. . .+.+.++.
T Consensus 401 ~Q~p~l-f~gTireNi~l~~~~~-s----~e~i~~al~~--------------a-----------------~l~~~v~~p 443 (559)
T COG4988 401 SQNPYL-FAGTIRENILLARPDA-S----DEEIIAALDQ--------------A-----------------GLLEFVPKP 443 (559)
T ss_pred CCCCcc-ccccHHHHhhccCCcC-C----HHHHHHHHHH--------------h-----------------cHHHhhcCC
Confidence 999987 6789999996322110 0 0111111111 1 01111221
Q ss_pred cCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhc
Q 006275 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLC 323 (652)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~~ 323 (652)
-|+++..++ ....|||||+|||+|||||+.+++++||||||+|||.++.+.+.+.|.+ +++|+|+|||+++.+. -|
T Consensus 444 ~GLdt~ige-~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~-~~ 521 (559)
T COG4988 444 DGLDTVIGE-GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAA-DA 521 (559)
T ss_pred Ccccchhcc-CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHh-cC
Confidence 244433333 3678999999999999999999999999999999999999999887743 4799999999999995 49
Q ss_pred CeEEEEcCCeEEEecCChHHHHHH
Q 006275 324 TKIVETEMGVSRTYEGNYSQYVLE 347 (652)
Q Consensus 324 d~ii~l~~G~~~~~~g~~~~~~~~ 347 (652)
|+|++|++|++ +..|++++....
T Consensus 522 D~I~vld~G~l-~~~g~~~~L~~~ 544 (559)
T COG4988 522 DRIVVLDNGRL-VEQGTHEELSEK 544 (559)
T ss_pred CEEEEecCCce-eccCCHHHHhhc
Confidence 99999999998 578888876544
No 474
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-38 Score=304.46 Aligned_cols=204 Identities=30% Similarity=0.445 Sum_probs=175.8
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceeccc----------cee
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP----------NYF 493 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~----------~~~ 493 (652)
||+.+|++++..++.+++++||++++||+.||+||||||||||||.|+|.+.|++|++.++|.++.. ..+
T Consensus 1 mi~a~nls~~~~Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~raVl 80 (259)
T COG4559 1 MIRAENLSYSLAGRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRAVL 80 (259)
T ss_pred CeeeeeeEEEeecceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhhhc
Confidence 5899999999999999999999999999999999999999999999999999999999999987531 234
Q ss_pred cccccccCCCCCCHHHHHHHhhhhc------cHHH--HHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHcc-----
Q 006275 494 EQNQAEALDLDKTVLETVAEAAEDW------RIDD--IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK----- 560 (652)
Q Consensus 494 ~~~~~~~~~~~~tv~e~~~~~~~~~------~~~~--~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~----- 560 (652)
+|+ ..+-+..||.|.+..+...+ ..+. +..+|.+.++. .+..+...+|||||||||.|||+|++
T Consensus 81 pQ~--s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~-~la~R~y~~LSGGEqQRVqlARvLaQl~~~v 157 (259)
T COG4559 81 PQN--SSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLS-GLAGRDYRTLSGGEQQRVQLARVLAQLWPPV 157 (259)
T ss_pred ccC--cccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChh-hhhccchhhcCchHHHHHHHHHHHHHccCCC
Confidence 444 35667789999998864322 1222 67889999884 67889999999999999999999986
Q ss_pred -CCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 561 -PSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 561 -~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
++++|+||||||+||+..+....++.+++ +..|+.|-||++.+..|||||++|.+|+++ ..|++.+.+..
T Consensus 158 ~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~-a~g~p~~vlt~ 231 (259)
T COG4559 158 PSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVI-ASGSPQDVLTD 231 (259)
T ss_pred CCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEe-ecCCHHHhcCH
Confidence 34699999999999999999999999877 459999999999999999999999999997 57888876543
No 475
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-38 Score=322.72 Aligned_cols=202 Identities=26% Similarity=0.363 Sum_probs=169.7
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCC-----CeeEEEECceecc---------
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL--------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~--------- 489 (652)
+++++|+++.|+++.+|+++||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~ 82 (249)
T PRK14253 3 KFNIENLDLFYGENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLR 82 (249)
T ss_pred eEEEeccEEEECCeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHH
Confidence 58999999999988999999999999999999999999999999999999986 5999999997652
Q ss_pred --cceecccccccCCCCCCHHHHHHHhhhhc-------cHHHHHHHHhhCCCCh---hhhccCcCCCCHHHHHHHHHHHH
Q 006275 490 --PNYFEQNQAEALDLDKTVLETVAEAAEDW-------RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCKF 557 (652)
Q Consensus 490 --~~~~~~~~~~~~~~~~tv~e~~~~~~~~~-------~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqrqrv~LAra 557 (652)
.+|.+|+ ..+++ .|+.+|+....... ....+.+.++.+++.. +..++++.+|||||||||+||||
T Consensus 83 ~~i~~~~q~--~~~~~-~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~lara 159 (249)
T PRK14253 83 IKVGMVFQK--PNPFP-MSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVKDRLKSHAFGLSGGQQQRLCIART 159 (249)
T ss_pred hheeEEecC--CCcCc-ccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhhHHhhcCcccCCHHHHHHHHHHHH
Confidence 1244443 23444 79999997643211 1123556777777642 34678899999999999999999
Q ss_pred HccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHh
Q 006275 558 MVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCF 629 (652)
Q Consensus 558 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~ 629 (652)
|+.+|+||||||||++||+.++..+.++|++. +.|||+|||+++++..+|||+++|++|++.. .|+.+++.
T Consensus 160 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 232 (249)
T PRK14253 160 IAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVE-HDDTQVIF 232 (249)
T ss_pred HHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 99999999999999999999999999999876 3599999999999999999999999999974 57777654
No 476
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-38 Score=325.23 Aligned_cols=204 Identities=25% Similarity=0.315 Sum_probs=169.7
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCeeEEEECceecc--------
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL-------- 489 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~-------- 489 (652)
++|+++||+++|+++++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 9 ~~l~i~~v~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 88 (264)
T PRK14243 9 TVLRTENLNVYYGSFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPVE 88 (264)
T ss_pred eEEEEeeeEEEECCEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChHH
Confidence 47999999999998899999999999999999999999999999999999986 48999999997652
Q ss_pred ----cceecccccccCCCCCCHHHHHHHhhhhc-----cHHHHHHHHhhCCCCh---hhhccCcCCCCHHHHHHHHHHHH
Q 006275 490 ----PNYFEQNQAEALDLDKTVLETVAEAAEDW-----RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCKF 557 (652)
Q Consensus 490 ----~~~~~~~~~~~~~~~~tv~e~~~~~~~~~-----~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqrqrv~LAra 557 (652)
.+++.|+ ..+++ .|+.+|+....... ..+.+..+++.+++.. ...++++.+||||||||++||||
T Consensus 89 ~~~~i~~v~q~--~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~lara 165 (264)
T PRK14243 89 VRRRIGMVFQK--PNPFP-KSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKDKLKQSGLSLSGGQQQRLCIARA 165 (264)
T ss_pred HhhhEEEEccC--Ccccc-ccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHHHhcCCcccCCHHHHHHHHHHHH
Confidence 1244443 23343 59999997643211 1233556677777631 34678899999999999999999
Q ss_pred HccCCCeEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEe---------CCEEEeecCChh
Q 006275 558 MVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVK---------GSNLQDYAGDYN 626 (652)
Q Consensus 558 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~drvi~l~---------~g~i~~~~g~~~ 626 (652)
|+.+|++|||||||++||+.++..+.++|.++. .|||+||||++++.++||||++|+ +|+++ ..|+.+
T Consensus 166 l~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~-~~~~~~ 244 (264)
T PRK14243 166 IAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLV-EFDRTE 244 (264)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEE-EeCCHH
Confidence 999999999999999999999999999998763 599999999999999999999998 79987 458887
Q ss_pred hHhh
Q 006275 627 VCFT 630 (652)
Q Consensus 627 ~~~~ 630 (652)
++.+
T Consensus 245 ~~~~ 248 (264)
T PRK14243 245 KIFN 248 (264)
T ss_pred HHHh
Confidence 7754
No 477
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-38 Score=322.84 Aligned_cols=209 Identities=19% Similarity=0.238 Sum_probs=168.7
Q ss_pred CCceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCC-----CCcEEEECCCC---------
Q 006275 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN--------- 160 (652)
Q Consensus 95 ~~~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p-----~~G~i~~~~~~--------- 160 (652)
...+.++++++.|++.++|+++||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 6 PIVMDCKLDKIFYGNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred CceEEEEeEEEEeCCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 3468999999999988999999999999999999999999999999999999986 79999998742
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHH
Q 006275 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (652)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (652)
..++|++|++.++ ..|+.||+....... . .. .....
T Consensus 86 ~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~---------------~------------------------~~-~~~~~ 124 (261)
T PRK14263 86 VVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLN---------------R------------------------YK-GDLGD 124 (261)
T ss_pred hhhhceEEEecCCccc-cccHHHHHHHHHhhc---------------C------------------------ch-HHHHH
Confidence 2499999998775 689999985321000 0 00 00122
Q ss_pred HHHHHhhhcCCCcc---cccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 006275 238 KVSKLMPELGFTAD---DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (652)
Q Consensus 238 ~i~~ll~~lgl~~~---~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIiv 312 (652)
++.++++.+|+... ..++++.+|||||+||++|||||+.+|++|||||||+|||+.++.++.++|++ .+.|||++
T Consensus 125 ~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~i 204 (261)
T PRK14263 125 RVKHALQGAALWDEVKDKLKVSGLSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALV 204 (261)
T ss_pred HHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEE
Confidence 34455566665321 23567889999999999999999999999999999999999999999988753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEc--------CCeEEEecCChHHHH
Q 006275 313 SHDRAFLDQLCTKIVETE--------MGVSRTYEGNYSQYV 345 (652)
Q Consensus 313 sHd~~~l~~~~d~ii~l~--------~G~~~~~~g~~~~~~ 345 (652)
||+++++..+||+|++++ +|+++ ..|+.+++.
T Consensus 205 sH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~-~~g~~~~~~ 244 (261)
T PRK14263 205 THNMQQAIRVADTTAFFSVDISQGTRTGYLV-EMGPTAQIF 244 (261)
T ss_pred eCCHHHHHHhCCEEEEEecccccccCCceEE-EeCCHHHHH
Confidence 999999999999999995 67774 567766543
No 478
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.5e-38 Score=369.27 Aligned_cols=213 Identities=25% Similarity=0.409 Sum_probs=167.3
Q ss_pred CceEEEeEEEEeCC---eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ce
Q 006275 96 SGVKLENISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MK 162 (652)
Q Consensus 96 ~~i~v~~ls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~ 162 (652)
..|+++|++|+|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ .+
T Consensus 477 ~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~lr~~ 556 (711)
T TIGR00958 477 GLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHYLHRQ 556 (711)
T ss_pred CeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHhh
Confidence 45999999999974 469999999999999999999999999999999999999999999999854 26
Q ss_pred EEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHH
Q 006275 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (652)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (652)
|+||+|+|.+ ++.|++||+..+..+. . .+++.++++.+. +...+.++
T Consensus 557 i~~v~Q~~~l-F~gTIreNI~~g~~~~-~----~e~i~~al~~a~---------------------------l~~~i~~l 603 (711)
T TIGR00958 557 VALVGQEPVL-FSGSVRENIAYGLTDT-P----DEEIMAAAKAAN---------------------------AHDFIMEF 603 (711)
T ss_pred ceEEecCccc-cccCHHHHHhcCCCCC-C----HHHHHHHHHHcC---------------------------CHHHHHhC
Confidence 9999999987 6789999996432110 0 011222222111 11111111
Q ss_pred hhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhh
Q 006275 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQL 322 (652)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~ 322 (652)
+ -|+.+..+ ....+||||||||++||||++++|+|||||||||+||+++.+.+.+.....++|+|+|||+++.+. .
T Consensus 604 -p-~GldT~ig-e~G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~~~~~~~~TvIiItHrl~~i~-~ 679 (711)
T TIGR00958 604 -P-NGYDTEVG-EKGSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQESRSRASRTVLLIAHRLSTVE-R 679 (711)
T ss_pred -C-CccCCccc-CCCCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHHhhccCCCeEEEEeccHHHHH-h
Confidence 1 14443333 336789999999999999999999999999999999999999998844446899999999999884 5
Q ss_pred cCeEEEEcCCeEEEecCChHHHHH
Q 006275 323 CTKIVETEMGVSRTYEGNYSQYVL 346 (652)
Q Consensus 323 ~d~ii~l~~G~~~~~~g~~~~~~~ 346 (652)
||+|+++++|++ ...|+++++..
T Consensus 680 aD~IivL~~G~i-ve~Gt~~eL~~ 702 (711)
T TIGR00958 680 ADQILVLKKGSV-VEMGTHKQLME 702 (711)
T ss_pred CCEEEEEECCEE-EEeeCHHHHHh
Confidence 999999999998 57788877654
No 479
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=2e-38 Score=308.53 Aligned_cols=162 Identities=33% Similarity=0.478 Sum_probs=144.7
Q ss_pred eEEEeEEEEeCCe--eeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC---------ceEEEE
Q 006275 98 VKLENISKSYKGV--TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFL 166 (652)
Q Consensus 98 i~v~~ls~~y~~~--~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~---------~~i~~v 166 (652)
|+++|++++|++. ++++++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~ 80 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISVL 80 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEEE
Confidence 4789999999765 69999999999999999999999999999999999999999999998752 359999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhc
Q 006275 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (652)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (652)
+|++.++ ..|++||+
T Consensus 81 ~q~~~~~-~~tv~~~i---------------------------------------------------------------- 95 (178)
T cd03247 81 NQRPYLF-DTTLRNNL---------------------------------------------------------------- 95 (178)
T ss_pred ccCCeee-cccHHHhh----------------------------------------------------------------
Confidence 9998764 35666552
Q ss_pred CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhcC
Q 006275 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLCT 324 (652)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~~d 324 (652)
+.+||||||||++|||||+.+|++|||||||++||+.+++.+.+.|++ .+.|||++||+++++. .||
T Consensus 96 ----------~~~LS~G~~qrv~laral~~~p~~lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~-~~d 164 (178)
T cd03247 96 ----------GRRFSGGERQRLALARILLQDAPIVLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIE-HMD 164 (178)
T ss_pred ----------cccCCHHHHHHHHHHHHHhcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHH-hCC
Confidence 367999999999999999999999999999999999999999888753 4789999999999995 699
Q ss_pred eEEEEcCCeEE
Q 006275 325 KIVETEMGVSR 335 (652)
Q Consensus 325 ~ii~l~~G~~~ 335 (652)
+++++++|++.
T Consensus 165 ~~~~l~~g~i~ 175 (178)
T cd03247 165 KILFLENGKII 175 (178)
T ss_pred EEEEEECCEEE
Confidence 99999999874
No 480
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-38 Score=342.25 Aligned_cols=212 Identities=22% Similarity=0.280 Sum_probs=171.6
Q ss_pred CceEEEeEEEEeCC---eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCCceEEEEeccCcc
Q 006275 96 SGVKLENISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEV 172 (652)
Q Consensus 96 ~~i~v~~ls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~~~i~~v~Q~~~~ 172 (652)
++++++|+++.|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|... ++.+.+.+
T Consensus 20 ~mL~lknL~~~~~~~~~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P~sGeI~I~G~~~---~i~~~~~l 96 (549)
T PRK13545 20 PFDKLKDLFFRSKDGEYHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMPNKGTVDIKGSAA---LIAISSGL 96 (549)
T ss_pred ceeEEEEEEEecCCCccceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCCCceEEEECCEee---eEEecccc
Confidence 46999999999976 4699999999999999999999999999999999999999999999987543 33334455
Q ss_pred CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCccc
Q 006275 173 SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADD 252 (652)
Q Consensus 173 ~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~ 252 (652)
.+..|++||+..... +. ........+.+.++++.+|+. +.
T Consensus 97 ~~~lTV~EnL~l~~~---------------~~------------------------~~~~~e~~e~i~elLe~lgL~-~~ 136 (549)
T PRK13545 97 NGQLTGIENIELKGL---------------MM------------------------GLTKEKIKEIIPEIIEFADIG-KF 136 (549)
T ss_pred CCCCcHHHHHHhhhh---------------hc------------------------CCCHHHHHHHHHHHHHHcCCh-hH
Confidence 566799999752100 00 000112233455677888885 56
Q ss_pred ccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCeEEEE
Q 006275 253 GDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTKIVET 329 (652)
Q Consensus 253 ~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~d~ii~l 329 (652)
.++++.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|+ +.|+|||+||||++++..+||++++|
T Consensus 137 ld~~~~~LSGGQrQRVaLArAL~~~P~LLLLDEPTsgLD~~sr~~LlelL~el~~~G~TIIIVSHdl~~i~~l~DrIivL 216 (549)
T PRK13545 137 IYQPVKTYSSGMKSRLGFAISVHINPDILVIDEALSVGDQTFTKKCLDKMNEFKEQGKTIFFISHSLSQVKSFCTKALWL 216 (549)
T ss_pred hhCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEE
Confidence 788899999999999999999999999999999999999999999988774 45899999999999999999999999
Q ss_pred cCCeEEEecCChHHHHHHHHHH
Q 006275 330 EMGVSRTYEGNYSQYVLEKAAW 351 (652)
Q Consensus 330 ~~G~~~~~~g~~~~~~~~~~~~ 351 (652)
++|++. +.|+.+++......|
T Consensus 217 ~~GkIv-~~G~~~el~~~~~~~ 237 (549)
T PRK13545 217 HYGQVK-EYGDIKEVVDHYDEF 237 (549)
T ss_pred ECCEEE-EECCHHHHHhhHHHH
Confidence 999984 667777665543333
No 481
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-38 Score=319.31 Aligned_cols=201 Identities=23% Similarity=0.444 Sum_probs=163.2
Q ss_pred EEEEeeeeEeCC-eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------ccee
Q 006275 425 VTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (652)
Q Consensus 425 i~~~~v~~~y~~-~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~~ 493 (652)
|+++|++++|++ +.+++++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+|.
T Consensus 3 l~~~~l~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 82 (229)
T cd03254 3 IEFENVNFSYDEKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMIGVV 82 (229)
T ss_pred EEEEEEEEecCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhEEEe
Confidence 789999999975 57999999999999999999999999999999999999999999999997652 2344
Q ss_pred cccccccCCCCCCHHHHHHHhhhhccHHHHHHHHhhCCCC----------hhhhccCcCCCCHHHHHHHHHHHHHccCCC
Q 006275 494 EQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFK----------ADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (652)
Q Consensus 494 ~~~~~~~~~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~----------~~~~~~~~~~LSgGqrqrv~LAral~~~p~ 563 (652)
+|+. .++ ..|+.+|+..........++.+.++.+++. ....++.+.+|||||||||+|||||+.+|+
T Consensus 83 ~q~~--~~~-~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 83 LQDT--FLF-SGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred cCCc--hhh-hhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 4442 333 359999987653322223333444433331 123456679999999999999999999999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 564 LLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 564 lLlLDEPt~~LD~~~~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
+|||||||++||+.+++.+.+.|.++. .|||+|||+++++.. ||++++|++|++. ..|+++++..
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~d~i~~l~~g~~~-~~~~~~~~~~ 226 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKN-ADKILVLDDGKII-EEGTHDELLA 226 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhh-CCEEEEEeCCeEE-EeCCHHHHHh
Confidence 999999999999999999999998763 599999999999965 9999999999997 4577766543
No 482
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.2e-38 Score=318.76 Aligned_cols=200 Identities=27% Similarity=0.406 Sum_probs=156.9
Q ss_pred eEEEeEEEEeCC--eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEEE
Q 006275 98 VKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (652)
Q Consensus 98 i~v~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~~ 165 (652)
|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|
T Consensus 3 l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (221)
T cd03244 3 IEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRISI 82 (221)
T ss_pred EEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhEEE
Confidence 899999999974 469999999999999999999999999999999999999999999998742 25999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh
Q 006275 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (652)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (652)
++|++.++ ..|++||+.. +.. ... +.+...++. . .+...+..+ .
T Consensus 83 ~~q~~~l~-~~tv~enl~~-~~~-~~~----~~~~~~~~~------------------------~---~l~~~~~~l--~ 126 (221)
T cd03244 83 IPQDPVLF-SGTIRSNLDP-FGE-YSD----EELWQALER------------------------V---GLKEFVESL--P 126 (221)
T ss_pred ECCCCccc-cchHHHHhCc-CCC-CCH----HHHHHHHHH------------------------h---CcHHHHHhc--c
Confidence 99998864 4699999741 100 000 000000000 0 011111111 1
Q ss_pred cCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhc
Q 006275 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLC 323 (652)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~~ 323 (652)
.|+.+ ..++.+.+|||||+||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|||++||+++++.. |
T Consensus 127 ~~l~~-~~~~~~~~LS~G~~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~ 204 (221)
T cd03244 127 GGLDT-VVEEGGENLSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIID-S 204 (221)
T ss_pred ccccc-ccccCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhh-C
Confidence 23432 34567899999999999999999999999999999999999999999998854 46899999999999975 9
Q ss_pred CeEEEEcCCeEE
Q 006275 324 TKIVETEMGVSR 335 (652)
Q Consensus 324 d~ii~l~~G~~~ 335 (652)
|++++|++|++.
T Consensus 205 d~i~~l~~g~~~ 216 (221)
T cd03244 205 DRILVLDKGRVV 216 (221)
T ss_pred CEEEEEECCeEE
Confidence 999999999874
No 483
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-38 Score=321.53 Aligned_cols=207 Identities=25% Similarity=0.385 Sum_probs=161.2
Q ss_pred eEEEeEEEEeC-CeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEEEE
Q 006275 98 VKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (652)
Q Consensus 98 i~v~~ls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~~v 166 (652)
|+++|++++|+ ++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 80 (236)
T cd03253 1 IEFENVTFAYDPGRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGVV 80 (236)
T ss_pred CEEEEEEEEeCCCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEEE
Confidence 47899999996 4679999999999999999999999999999999999999999999998743 249999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhc
Q 006275 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (652)
Q Consensus 167 ~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (652)
+|++.++ ..|+.+|+....... .. ..+...+.. ..+.+.+..+
T Consensus 81 ~q~~~~~-~~tv~~nl~~~~~~~-~~----~~~~~~~~~-------------------------------~~l~~~~~~l 123 (236)
T cd03253 81 PQDTVLF-NDTIGYNIRYGRPDA-TD----EEVIEAAKA-------------------------------AQIHDKIMRF 123 (236)
T ss_pred CCCChhh-cchHHHHHhhcCCCC-CH----HHHHHHHHH-------------------------------cCcHHHHHhc
Confidence 9998875 579999985321100 00 000000000 0011222222
Q ss_pred --CCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhh
Q 006275 247 --GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQL 322 (652)
Q Consensus 247 --gl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~ 322 (652)
|+. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.++..+.++|++ .|+|||++||+.+++..
T Consensus 124 ~~~~~-~~~~~~~~~LS~G~~~rl~la~aL~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~- 201 (236)
T cd03253 124 PDGYD-TIVGERGLKLSGGEKQRVAIARAILKNPPILLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVN- 201 (236)
T ss_pred ccccc-chhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHh-
Confidence 333 234666899999999999999999999999999999999999999999887743 28899999999999965
Q ss_pred cCeEEEEcCCeEEEecCChHHH
Q 006275 323 CTKIVETEMGVSRTYEGNYSQY 344 (652)
Q Consensus 323 ~d~ii~l~~G~~~~~~g~~~~~ 344 (652)
||++++|++|++. ..|+.+++
T Consensus 202 ~d~~~~l~~g~i~-~~~~~~~~ 222 (236)
T cd03253 202 ADKIIVLKDGRIV-ERGTHEEL 222 (236)
T ss_pred CCEEEEEECCEEE-eeCCHHHH
Confidence 9999999999984 56765554
No 484
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=4.7e-38 Score=316.34 Aligned_cols=190 Identities=30% Similarity=0.425 Sum_probs=163.8
Q ss_pred EEEEeeeeEeCC----eeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc-----------
Q 006275 425 VTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------- 489 (652)
Q Consensus 425 i~~~~v~~~y~~----~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------- 489 (652)
++++|+++.|++ +.+|+++||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 789999999974 67999999999999999999999999999999999999999999999998652
Q ss_pred --cceecccccccCCCCCCHHHHHHHhhhhc-------cHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHcc
Q 006275 490 --PNYFEQNQAEALDLDKTVLETVAEAAEDW-------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (652)
Q Consensus 490 --~~~~~~~~~~~~~~~~tv~e~~~~~~~~~-------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~ 560 (652)
.+|++|+ ..+++..|+.+|+....... ....+.++++++++. +..++++.+||+|||||++|||||+.
T Consensus 82 ~~i~~~~q~--~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~lS~G~~qrv~laral~~ 158 (220)
T TIGR02982 82 RNIGYIFQA--HNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLG-DHLDYYPHNLSGGQKQRVAIARALVH 158 (220)
T ss_pred hheEEEcCC--hhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCh-hhhhcChhhCCHHHHHHHHHHHHHhc
Confidence 1344443 34556689999998643211 123577899999994 67789999999999999999999999
Q ss_pred CCCeEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEE
Q 006275 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (652)
Q Consensus 561 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i 618 (652)
+|++|||||||++||+.++..+.+.|+++ +.|||+||||++.. ++||+|++|++|++
T Consensus 159 ~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~-~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 159 RPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRIL-DVADRIVHMEDGKL 219 (220)
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHH-hhCCEEEEEECCEE
Confidence 99999999999999999999999988754 46999999999864 78999999999986
No 485
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-38 Score=322.36 Aligned_cols=203 Identities=24% Similarity=0.314 Sum_probs=170.5
Q ss_pred EEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCC-----CeeEEEECceecc---------
Q 006275 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL--------- 489 (652)
Q Consensus 424 ~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~--------- 489 (652)
+|+++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 7 ~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 86 (259)
T PRK14260 7 AIKVKDLSFYYNTSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRL 86 (259)
T ss_pred eEEEEEEEEEECCeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhh
Confidence 69999999999888899999999999999999999999999999999999985 4899999997652
Q ss_pred ---cceecccccccCCCCCCHHHHHHHhhhh------cc-HHHHHHHHhhCCCC---hhhhccCcCCCCHHHHHHHHHHH
Q 006275 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED------WR-IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFCK 556 (652)
Q Consensus 490 ---~~~~~~~~~~~~~~~~tv~e~~~~~~~~------~~-~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqrqrv~LAr 556 (652)
.+|+.|+ ..+++ .|+.+|+...... .. ...+.++++.+++. ....++++.+|||||||||+|||
T Consensus 87 ~~~i~~v~q~--~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~lar 163 (259)
T PRK14260 87 RRQIGMVFQR--PNPFP-MSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDKLNKSALGLSGGQQQRLCIAR 163 (259)
T ss_pred hhheEEEecc--cccCC-ccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHHHH
Confidence 1234443 23444 8999999764321 11 23456778888873 23568899999999999999999
Q ss_pred HHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEe-----CCEEEeecCChhhHh
Q 006275 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVK-----GSNLQDYAGDYNVCF 629 (652)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~-----~g~i~~~~g~~~~~~ 629 (652)
||+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+||++++|+ +|+++. .|+.+++.
T Consensus 164 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~-~~~~~~~~ 242 (259)
T PRK14260 164 ALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVE-FGVTTQIF 242 (259)
T ss_pred HHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEE-eCCHHHHh
Confidence 999999999999999999999999999999875 3599999999999999999999997 499874 58888765
Q ss_pred h
Q 006275 630 T 630 (652)
Q Consensus 630 ~ 630 (652)
+
T Consensus 243 ~ 243 (259)
T PRK14260 243 S 243 (259)
T ss_pred c
Confidence 4
No 486
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-38 Score=355.88 Aligned_cols=200 Identities=24% Similarity=0.301 Sum_probs=173.0
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCC--CeeEEEECceecc-----------
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP--RGGEVLLGEHNVL----------- 489 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p--~~G~i~~~g~~~~----------- 489 (652)
++|+++|++++|+++.+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 4 ~~l~~~nl~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 83 (506)
T PRK13549 4 YLLEMKNITKTFGGVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERAG 83 (506)
T ss_pred ceEEEeeeEEEeCCeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHCC
Confidence 579999999999988999999999999999999999999999999999999986 8999999997652
Q ss_pred cceecccccccCCCCCCHHHHHHHhhhh-----cc----HHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHcc
Q 006275 490 PNYFEQNQAEALDLDKTVLETVAEAAED-----WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (652)
Q Consensus 490 ~~~~~~~~~~~~~~~~tv~e~~~~~~~~-----~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~ 560 (652)
.+|++|+ ..+++.+|+.+|+.+.... .. ...+.++++.+++. ...++++.+|||||||||+|||||+.
T Consensus 84 i~~v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~ 160 (506)
T PRK13549 84 IAIIHQE--LALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLD-INPATPVGNLGLGQQQLVEIAKALNK 160 (506)
T ss_pred eEEEEec--cccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCC-CCcccchhhCCHHHHHHHHHHHHHhc
Confidence 2355554 3466778999999764311 11 23577899999994 56799999999999999999999999
Q ss_pred CCCeEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChh
Q 006275 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYN 626 (652)
Q Consensus 561 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~ 626 (652)
+|+||||||||++||+.++..+.++|.++ +.|||+||||++++..+||+|++|++|+++. .|+.+
T Consensus 161 ~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~-~~~~~ 228 (506)
T PRK13549 161 QARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIG-TRPAA 228 (506)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEee-ecccc
Confidence 99999999999999999999999999765 4699999999999999999999999999874 45444
No 487
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=2.3e-38 Score=308.77 Aligned_cols=173 Identities=35% Similarity=0.571 Sum_probs=148.2
Q ss_pred EEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecccceecccccccCCCCC
Q 006275 426 TIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDK 505 (652)
Q Consensus 426 ~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~~~ 505 (652)
+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... . ..
T Consensus 1 ~~~~l~~~~~~~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~--~--~~------- 69 (180)
T cd03214 1 EVENLSVGYGGRTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASL--S--PK------- 69 (180)
T ss_pred CeeEEEEEECCeeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcC--C--HH-------
Confidence 478999999888899999999999999999999999999999999999999999999998765210 0 00
Q ss_pred CHHHHHHHhhhhccHHHHHHHHhhCCCChhhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHH
Q 006275 506 TVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEA 585 (652)
Q Consensus 506 tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~ 585 (652)
.....+.+ +..+++.+++. +..++.+.+||||||||++||||++.+|++|||||||++||+.+++.+.++
T Consensus 70 ~~~~~i~~---------~~q~l~~~gl~-~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~ 139 (180)
T cd03214 70 ELARKIAY---------VPQALELLGLA-HLADRPFNELSGGERQRVLLARALAQEPPILLLDEPTSHLDIAHQIELLEL 139 (180)
T ss_pred HHHHHHhH---------HHHHHHHcCCH-hHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHH
Confidence 00111111 11178888885 567889999999999999999999999999999999999999999999999
Q ss_pred HHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEE
Q 006275 586 ISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQ 619 (652)
Q Consensus 586 l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~ 619 (652)
|.++ +.|+|++||+++++.++||++++|++|++.
T Consensus 140 l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~ 177 (180)
T cd03214 140 LRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIV 177 (180)
T ss_pred HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 9765 459999999999999999999999999986
No 488
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-37 Score=320.08 Aligned_cols=205 Identities=23% Similarity=0.328 Sum_probs=166.7
Q ss_pred eEEEeEEEEeCC--------------------eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEEC
Q 006275 98 VKLENISKSYKG--------------------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKA 157 (652)
Q Consensus 98 i~v~~ls~~y~~--------------------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~ 157 (652)
|+++|+++.|.. +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~~~ 84 (264)
T PRK13546 5 VNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDRN 84 (264)
T ss_pred EEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEC
Confidence 777888777732 248999999999999999999999999999999999999999999998
Q ss_pred CCCceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHH
Q 006275 158 KSNMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (652)
Q Consensus 158 ~~~~~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (652)
| .+++++|.+.+....|+.+|+...... .. ........
T Consensus 85 g---~~~~~~~~~~~~~~~tv~enl~~~~~~---------------~~------------------------~~~~~~~~ 122 (264)
T PRK13546 85 G---EVSVIAISAGLSGQLTGIENIEFKMLC---------------MG------------------------FKRKEIKA 122 (264)
T ss_pred C---EEeEEecccCCCCCCcHHHHHHHHHHH---------------cC------------------------CCHHHHHH
Confidence 6 367888888776778999997521100 00 00011122
Q ss_pred HHHHHhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEec
Q 006275 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISH 314 (652)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsH 314 (652)
.+..++..+++. +..++++.+|||||+|||+|||||+.+|++|||||||+|||+.+++.+.+.|. +.|+|||++||
T Consensus 123 ~~~~~l~~~~l~-~~~~~~~~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH 201 (264)
T PRK13546 123 MTPKIIEFSELG-EFIYQPVKKYSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSH 201 (264)
T ss_pred HHHHHHHHcCCc-hhhcCCcccCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcC
Confidence 334556666775 56788899999999999999999999999999999999999999998888764 45899999999
Q ss_pred CHHHHHhhcCeEEEEcCCeEEEecCChHHHHH
Q 006275 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQYVL 346 (652)
Q Consensus 315 d~~~l~~~~d~ii~l~~G~~~~~~g~~~~~~~ 346 (652)
+++++..+||+|+++++|++. ..|+++++..
T Consensus 202 ~~~~i~~~~d~i~~l~~G~i~-~~g~~~~~~~ 232 (264)
T PRK13546 202 NLGQVRQFCTKIAWIEGGKLK-DYGELDDVLP 232 (264)
T ss_pred CHHHHHHHcCEEEEEECCEEE-EeCCHHHHHH
Confidence 999999999999999999984 6687766543
No 489
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=3.7e-38 Score=319.29 Aligned_cols=194 Identities=21% Similarity=0.320 Sum_probs=159.0
Q ss_pred eeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCC----CCcEEEECCCC--------ceEEEEeccCc--cCCCCC
Q 006275 112 VLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP----DSGNVIKAKSN--------MKIAFLSQEFE--VSMSRT 177 (652)
Q Consensus 112 vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p----~~G~i~~~~~~--------~~i~~v~Q~~~--~~~~~T 177 (652)
+++|+||+|++|++++|+||||||||||+++|+|+++| ++|+|.++|.+ ..++|++|++. +.+..|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 57899999999999999999999999999999999999 89999998743 36999999984 334578
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhhcCCCc--ccccC
Q 006275 178 VREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTA--DDGDR 255 (652)
Q Consensus 178 v~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~--~~~~~ 255 (652)
+.+|+...... .. ........++.++++.+|+.. ...++
T Consensus 81 ~~~~~~~~~~~--------------~~-------------------------~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 121 (230)
T TIGR02770 81 MGNHAIETLRS--------------LG-------------------------KLSKQARALILEALEAVGLPDPEEVLKK 121 (230)
T ss_pred HHHHHHHHHHH--------------cC-------------------------ccHHHHHHHHHHHHHHcCCCchHHHHhC
Confidence 98887421100 00 000112345667888888862 45688
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCeEEEEcC
Q 006275 256 LVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTKIVETEM 331 (652)
Q Consensus 256 ~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~ii~l~~ 331 (652)
++.+|||||||||+|||||+.+|+||||||||+|||+.++..+.++|++ .++|||++||+++++..+||+|++|++
T Consensus 122 ~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 201 (230)
T TIGR02770 122 YPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDD 201 (230)
T ss_pred ChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 8999999999999999999999999999999999999999999887743 478999999999999999999999999
Q ss_pred CeEEEecCChHHHH
Q 006275 332 GVSRTYEGNYSQYV 345 (652)
Q Consensus 332 G~~~~~~g~~~~~~ 345 (652)
|++. ..|..+++.
T Consensus 202 G~i~-~~~~~~~~~ 214 (230)
T TIGR02770 202 GRIV-ERGTVKEIF 214 (230)
T ss_pred CEEE-EeCCHHHHH
Confidence 9984 567665553
No 490
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=3e-38 Score=306.00 Aligned_cols=157 Identities=30% Similarity=0.542 Sum_probs=139.8
Q ss_pred eEEEeEEEEeCC--eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEEE
Q 006275 98 VKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (652)
Q Consensus 98 i~v~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~~ 165 (652)
|+++|++++|++ .++++++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 478999999975 469999999999999999999999999999999999999999999998742 35899
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhhh
Q 006275 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (652)
Q Consensus 166 v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (652)
++|++.+++ .|++||
T Consensus 81 ~~q~~~~~~-~tv~~~---------------------------------------------------------------- 95 (173)
T cd03246 81 LPQDDELFS-GSIAEN---------------------------------------------------------------- 95 (173)
T ss_pred ECCCCcccc-CcHHHH----------------------------------------------------------------
Confidence 999986644 365543
Q ss_pred cCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhh
Q 006275 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQL 322 (652)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~ 322 (652)
+ ||||||||++|||||+.+|++|||||||++||+.++.++.++|+ +.|+|||++||+++++ ..
T Consensus 96 -----------l--LS~G~~qrv~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~-~~ 161 (173)
T cd03246 96 -----------I--LSGGQRQRLGLARALYGNPRILVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETL-AS 161 (173)
T ss_pred -----------C--cCHHHHHHHHHHHHHhcCCCEEEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHH-Hh
Confidence 0 89999999999999999999999999999999999999988874 3588999999999998 57
Q ss_pred cCeEEEEcCCe
Q 006275 323 CTKIVETEMGV 333 (652)
Q Consensus 323 ~d~ii~l~~G~ 333 (652)
||+++++++|+
T Consensus 162 ~d~v~~l~~G~ 172 (173)
T cd03246 162 ADRILVLEDGR 172 (173)
T ss_pred CCEEEEEECCC
Confidence 99999999885
No 491
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5.6e-38 Score=312.80 Aligned_cols=184 Identities=25% Similarity=0.386 Sum_probs=154.3
Q ss_pred CceEEEeEEEEeCC--eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceE
Q 006275 96 SGVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKI 163 (652)
Q Consensus 96 ~~i~v~~ls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i 163 (652)
+.|+++|++++|++ .++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..|
T Consensus 5 ~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 84 (207)
T cd03369 5 GEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSSL 84 (207)
T ss_pred CeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 35999999999975 469999999999999999999999999999999999999999999998742 359
Q ss_pred EEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHh
Q 006275 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (652)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (652)
+|++|++.++. .|+++|+... .. .. ...+.+.+
T Consensus 85 ~~v~q~~~~~~-~tv~~~l~~~-~~-----------------------------------------~~----~~~~~~~l 117 (207)
T cd03369 85 TIIPQDPTLFS-GTIRSNLDPF-DE-----------------------------------------YS----DEEIYGAL 117 (207)
T ss_pred EEEecCCcccC-ccHHHHhccc-CC-----------------------------------------CC----HHHHHHHh
Confidence 99999987754 6999997411 00 00 00011111
Q ss_pred hhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHh
Q 006275 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQ 321 (652)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~ 321 (652)
+ .++++.+|||||+||++|||||+.+|++|||||||++||+.++..+.++|++ .+.|+|++||+.+++..
T Consensus 118 ~--------~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~ 189 (207)
T cd03369 118 R--------VSEGGLNLSQGQRQLLCLARALLKRPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIID 189 (207)
T ss_pred h--------ccCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhh
Confidence 1 2456899999999999999999999999999999999999999999988864 37899999999999976
Q ss_pred hcCeEEEEcCCeEE
Q 006275 322 LCTKIVETEMGVSR 335 (652)
Q Consensus 322 ~~d~ii~l~~G~~~ 335 (652)
||++++|++|++.
T Consensus 190 -~d~v~~l~~g~i~ 202 (207)
T cd03369 190 -YDKILVMDAGEVK 202 (207)
T ss_pred -CCEEEEEECCEEE
Confidence 9999999999874
No 492
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-37 Score=328.33 Aligned_cols=213 Identities=24% Similarity=0.386 Sum_probs=176.0
Q ss_pred cCCCCCCCCcEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCeeEEEECceec
Q 006275 414 FPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNV 488 (652)
Q Consensus 414 ~p~~~~~~~~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~ 488 (652)
|..+..+.+.+|+++||+++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++
T Consensus 35 ~~~~~~~~~~~l~i~nl~~~~~~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i 114 (305)
T PRK14264 35 WTDYEFDGDAKLSVEDLDVYYGDDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDI 114 (305)
T ss_pred ccccccCCCceEEEEEEEEEeCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEc
Confidence 44444556778999999999998899999999999999999999999999999999999986 6899999999765
Q ss_pred c------------cceecccccccCCCCCCHHHHHHHhhhh-------------------ccHHHHHHHHhhCCCC---h
Q 006275 489 L------------PNYFEQNQAEALDLDKTVLETVAEAAED-------------------WRIDDIKGLLGRCNFK---A 534 (652)
Q Consensus 489 ~------------~~~~~~~~~~~~~~~~tv~e~~~~~~~~-------------------~~~~~~~~~L~~~~l~---~ 534 (652)
. .+|++|+. .+++ .|+.+|+...... .....+.++++.+++. .
T Consensus 115 ~~~~~~~~~~~~~i~~v~q~~--~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 191 (305)
T PRK14264 115 YQDGVNLVELRKRVGMVFQSP--NPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVN 191 (305)
T ss_pred ccccccHHHHhhceEEEccCC--cccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhh
Confidence 2 12444442 3333 5999999864210 0123467788888874 2
Q ss_pred hhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEE-E
Q 006275 535 DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRV-V 611 (652)
Q Consensus 535 ~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drv-i 611 (652)
...++++.+|||||||||+|||||+.+|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+||++ +
T Consensus 192 ~~~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~ 271 (305)
T PRK14264 192 DRLDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAV 271 (305)
T ss_pred HHhcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEE
Confidence 3467889999999999999999999999999999999999999999999999876 359999999999999999997 5
Q ss_pred EEeCCEEEeecCChhhHhh
Q 006275 612 EVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 612 ~l~~g~i~~~~g~~~~~~~ 630 (652)
+|++|++.. .|+++++.+
T Consensus 272 ~l~~G~i~~-~g~~~~~~~ 289 (305)
T PRK14264 272 FLTGGELVE-YDDTDKIFE 289 (305)
T ss_pred EecCCEEEE-eCCHHHHHh
Confidence 679999974 577776644
No 493
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=2.9e-38 Score=308.59 Aligned_cols=161 Identities=26% Similarity=0.430 Sum_probs=144.8
Q ss_pred ceEEEeEEEEeCCeeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC-----------ceEEE
Q 006275 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAF 165 (652)
Q Consensus 97 ~i~v~~ls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~-----------~~i~~ 165 (652)
+|+++|++++| +|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|
T Consensus 4 ~l~~~~l~~~~----~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (182)
T cd03215 4 VLEVRGLSVKG----AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGIAY 79 (182)
T ss_pred EEEEeccEEEe----eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCeEE
Confidence 59999999999 8999999999999999999999999999999999999999999998732 25999
Q ss_pred EeccC---ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHH
Q 006275 166 LSQEF---EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (652)
Q Consensus 166 v~Q~~---~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (652)
++|++ .+++..|++||+...
T Consensus 80 ~~q~~~~~~~~~~~t~~e~l~~~--------------------------------------------------------- 102 (182)
T cd03215 80 VPEDRKREGLVLDLSVAENIALS--------------------------------------------------------- 102 (182)
T ss_pred ecCCcccCcccCCCcHHHHHHHH---------------------------------------------------------
Confidence 99985 455678999886310
Q ss_pred hhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHH
Q 006275 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFL 319 (652)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l 319 (652)
. .||||||||++|||||+.+|++|||||||++||+.+++.+.++|++ .+.|+|++||+++++
T Consensus 103 --------~-------~LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~ 167 (182)
T cd03215 103 --------S-------LLSGGNQQKVVLARWLARDPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDEL 167 (182)
T ss_pred --------h-------hcCHHHHHHHHHHHHHccCCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 0 0999999999999999999999999999999999999999887753 478999999999999
Q ss_pred HhhcCeEEEEcCCe
Q 006275 320 DQLCTKIVETEMGV 333 (652)
Q Consensus 320 ~~~~d~ii~l~~G~ 333 (652)
..+||+++++++|+
T Consensus 168 ~~~~d~v~~l~~G~ 181 (182)
T cd03215 168 LGLCDRILVMYEGR 181 (182)
T ss_pred HHhCCEEEEecCCc
Confidence 99999999999886
No 494
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=3.1e-38 Score=367.93 Aligned_cols=203 Identities=26% Similarity=0.485 Sum_probs=175.2
Q ss_pred cEEEEEeeeeEeC--CeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------c
Q 006275 423 SVVTIKNLEFGYE--DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------P 490 (652)
Q Consensus 423 ~~i~~~~v~~~y~--~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~ 490 (652)
..|+++||+|+|+ ++++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. .
T Consensus 450 ~~I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i 529 (686)
T TIGR03797 450 GAIEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQL 529 (686)
T ss_pred ceEEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhcc
Confidence 4599999999995 357999999999999999999999999999999999999999999999998863 2
Q ss_pred ceecccccccCCCCCCHHHHHHHhhhhccHHHHHHHHhhCCCChhhh------c----cCcCCCCHHHHHHHHHHHHHcc
Q 006275 491 NYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADML------D----RKVSLLSGGEKARLAFCKFMVK 560 (652)
Q Consensus 491 ~~~~~~~~~~~~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~------~----~~~~~LSgGqrqrv~LAral~~ 560 (652)
++++|+. ..++.|++||+..+.. ...+++.++++.+++..... + ....+||||||||++||||+++
T Consensus 530 ~~v~Q~~---~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~ 605 (686)
T TIGR03797 530 GVVLQNG---RLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVR 605 (686)
T ss_pred EEEccCC---ccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhc
Confidence 4555543 3467899999998755 56777888888888743211 1 2335799999999999999999
Q ss_pred CCCeEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 561 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
+|+|||||||||+||+.+++.+.+.|++.+.|+|+|||+++.+.. ||+|++|++|++++ .|++++.++.
T Consensus 606 ~p~iLiLDEpTS~LD~~te~~i~~~L~~~~~T~IiItHr~~~i~~-~D~Iivl~~G~iv~-~G~~~~Ll~~ 674 (686)
T TIGR03797 606 KPRILLFDEATSALDNRTQAIVSESLERLKVTRIVIAHRLSTIRN-ADRIYVLDAGRVVQ-QGTYDELMAR 674 (686)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHhCCeEEEEecChHHHHc-CCEEEEEECCEEEE-ECCHHHHHhC
Confidence 999999999999999999999999999888899999999999976 99999999999984 6888876654
No 495
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.5e-39 Score=341.76 Aligned_cols=202 Identities=26% Similarity=0.410 Sum_probs=175.5
Q ss_pred EEEEEeeeeEeCCe--eeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc---c-------c
Q 006275 424 VVTIKNLEFGYEDR--LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---P-------N 491 (652)
Q Consensus 424 ~i~~~~v~~~y~~~--~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---~-------~ 491 (652)
.++++||+|+|++. ++|+|+||++++||++||+|++|||||||+.+|+|.++|++|+|.++|.++. + .
T Consensus 336 ~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~ 415 (573)
T COG4987 336 ALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETIS 415 (573)
T ss_pred eeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHh
Confidence 79999999999865 5999999999999999999999999999999999999999999999997652 1 1
Q ss_pred eecccccccCCCCCCHHHHHHHhhhhccHHHHHHHHhhCCCChhh----------hccCcCCCCHHHHHHHHHHHHHccC
Q 006275 492 YFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADM----------LDRKVSLLSGGEKARLAFCKFMVKP 561 (652)
Q Consensus 492 ~~~~~~~~~~~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~----------~~~~~~~LSgGqrqrv~LAral~~~ 561 (652)
...|.. -.+..|+++|+..+..+.++++++++++++|+..-. .+.....||||||||++|||+|+++
T Consensus 416 vl~Qr~---hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~d 492 (573)
T COG4987 416 VLTQRV---HLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGERRRLALARALLHD 492 (573)
T ss_pred hhccch---HHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCchHHHHHHHHHHHHcC
Confidence 123322 246789999999998888889999999999985321 2223458999999999999999999
Q ss_pred CCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 562 STLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 562 p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
.+++||||||.|||+.+.+.+.+.|.+. ++|+|+|||++..++. ||||++|++|++++ .|++.+.+.
T Consensus 493 apl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~-~drIivl~~Gkiie-~G~~~~Ll~ 561 (573)
T COG4987 493 APLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLER-MDRIIVLDNGKIIE-EGTHAELLA 561 (573)
T ss_pred CCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhh-cCEEEEEECCeeee-cCCHHhhhc
Confidence 9999999999999999999999999764 5699999999999976 99999999999985 698888765
No 496
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=4.9e-38 Score=310.07 Aligned_cols=170 Identities=29% Similarity=0.387 Sum_probs=151.2
Q ss_pred ceEEEeEEEEeCC------eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCC--CCCCcEEEECCCC-------c
Q 006275 97 GVKLENISKSYKG------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQE--EPDSGNVIKAKSN-------M 161 (652)
Q Consensus 97 ~i~v~~ls~~y~~------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~--~p~~G~i~~~~~~-------~ 161 (652)
.|+++|++++|++ +++|+++||+|++|++++|+||||||||||+++|+|++ +|++|+|.++|.+ .
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~ 82 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDKRSFRK 82 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCchHhhhh
Confidence 3899999999975 67999999999999999999999999999999999999 9999999998753 3
Q ss_pred eEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHH
Q 006275 162 KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (652)
Q Consensus 162 ~i~~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (652)
.++|++|++.+++..|++||+.... .
T Consensus 83 ~i~~~~q~~~~~~~~t~~~~i~~~~------------------------------------------------------~ 108 (194)
T cd03213 83 IIGYVPQDDILHPTLTVRETLMFAA------------------------------------------------------K 108 (194)
T ss_pred eEEEccCcccCCCCCcHHHHHHHHH------------------------------------------------------H
Confidence 5999999998877889999874100 0
Q ss_pred HhhhcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHH-
Q 006275 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRA- 317 (652)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~- 317 (652)
..+||||||||++|||||+.+|++|||||||++||+.+++.+.++|++ .++|+|++||+++
T Consensus 109 ---------------~~~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~ 173 (194)
T cd03213 109 ---------------LRGLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSS 173 (194)
T ss_pred ---------------hccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchH
Confidence 017999999999999999999999999999999999999999887743 4889999999996
Q ss_pred HHHhhcCeEEEEcCCeEE
Q 006275 318 FLDQLCTKIVETEMGVSR 335 (652)
Q Consensus 318 ~l~~~~d~ii~l~~G~~~ 335 (652)
.+.++||+++++++|++.
T Consensus 174 ~~~~~~d~v~~l~~G~i~ 191 (194)
T cd03213 174 EIFELFDKLLLLSQGRVI 191 (194)
T ss_pred HHHHhcCEEEEEeCCEEE
Confidence 788899999999999874
No 497
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=6e-38 Score=317.73 Aligned_cols=206 Identities=25% Similarity=0.329 Sum_probs=165.6
Q ss_pred eeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCC----CeeEEEECceecc--------cceecccccccCCCCCC
Q 006275 439 LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP----RGGEVLLGEHNVL--------PNYFEQNQAEALDLDKT 506 (652)
Q Consensus 439 vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p----~~G~i~~~g~~~~--------~~~~~~~~~~~~~~~~t 506 (652)
+++|+||+|++|++++|+||||||||||+++|+|+++| ++|+|.++|.++. .+|+.|+....+.+..|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 57899999999999999999999999999999999999 8999999997652 23445443222445679
Q ss_pred HHHHHHHhhhh------ccHHHHHHHHhhCCCCh--hhhccCcCCCCHHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHH
Q 006275 507 VLETVAEAAED------WRIDDIKGLLGRCNFKA--DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPS 578 (652)
Q Consensus 507 v~e~~~~~~~~------~~~~~~~~~L~~~~l~~--~~~~~~~~~LSgGqrqrv~LAral~~~p~lLlLDEPt~~LD~~~ 578 (652)
+.+++...... ...+++.++++.+++.. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~ 160 (230)
T TIGR02770 81 MGNHAIETLRSLGKLSKQARALILEALEAVGLPDPEEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVN 160 (230)
T ss_pred HHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCchHHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHH
Confidence 98887643211 11234788999999952 46789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc----CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhhcCCcccccchhHHHhhh
Q 006275 579 KEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTSFSPFLLVPLRSYFFKHL 648 (652)
Q Consensus 579 ~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (652)
+..+.+.|.++ +.|||++|||++++..+||++++|++|++. ..|..+++..... ....+.|+--||
T Consensus 161 ~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~~~~---~~~~~~~~~~~~ 230 (230)
T TIGR02770 161 QARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIV-ERGTVKEIFYNPK---HETTRKLLSAHL 230 (230)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHhCcC---CHHHHHHHHhcC
Confidence 99999988754 459999999999999999999999999997 4577777654321 223444554453
No 498
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-37 Score=320.25 Aligned_cols=204 Identities=25% Similarity=0.348 Sum_probs=169.9
Q ss_pred cEEEEEeeeeEeCCeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCC--C---CeeEEEECceeccc-------
Q 006275 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK--P---RGGEVLLGEHNVLP------- 490 (652)
Q Consensus 423 ~~i~~~~v~~~y~~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~--p---~~G~i~~~g~~~~~------- 490 (652)
++|+++|++++|+++.+|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|.++..
T Consensus 5 ~~i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 84 (253)
T PRK14261 5 IILSTKNLNLWYGEKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVA 84 (253)
T ss_pred ceEEEeeeEEEECCeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhh
Confidence 47999999999998899999999999999999999999999999999999975 3 48999999977521
Q ss_pred -----ceecccccccCCCCCCHHHHHHHhhhh-----c-c-HHHHHHHHhhCCCCh---hhhccCcCCCCHHHHHHHHHH
Q 006275 491 -----NYFEQNQAEALDLDKTVLETVAEAAED-----W-R-IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFC 555 (652)
Q Consensus 491 -----~~~~~~~~~~~~~~~tv~e~~~~~~~~-----~-~-~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqrqrv~LA 555 (652)
+|.+|. ..+++ .|+.+|+.+.... . . ...+.++++.+++.. ...++++.+||||||||++||
T Consensus 85 ~~~~i~~~~q~--~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la 161 (253)
T PRK14261 85 LRRKIGMVFQR--PNPFP-KSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVKDRLHDSALSLSGGQQQRLCIA 161 (253)
T ss_pred hhceEEEEecC--CccCc-ccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhHHHhhcChhhCCHHHHHHHHHH
Confidence 233443 33444 5999999864321 1 1 224567778777632 346789999999999999999
Q ss_pred HHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhh
Q 006275 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFT 630 (652)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~ 630 (652)
|||+.+|++|||||||+|||+.++..+.++|+++ +.|||++|||++++..+||++++|++|++. ..|+.++..+
T Consensus 162 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~~ 237 (253)
T PRK14261 162 RTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLI-EFDKTTQIFE 237 (253)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEE-EcCCHHHHHh
Confidence 9999999999999999999999999999999876 369999999999999999999999999997 4577776543
No 499
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=4.2e-38 Score=326.08 Aligned_cols=199 Identities=19% Similarity=0.340 Sum_probs=169.8
Q ss_pred EEEEeeeeEeC--CeeeeeceEEEEEcCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeEEEECceecc----------cce
Q 006275 425 VTIKNLEFGYE--DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNY 492 (652)
Q Consensus 425 i~~~~v~~~y~--~~~vl~~isl~i~~Ge~~~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~ 492 (652)
|+++|++++|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++ .+|+|.++|.++. .++
T Consensus 3 i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i~~ 81 (275)
T cd03289 3 MTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAFGV 81 (275)
T ss_pred EEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhEEE
Confidence 89999999994 4679999999999999999999999999999999999998 7899999998752 234
Q ss_pred ecccccccCCCCCCHHHHHHHhhhhccHHHHHHHHhhCCCChhhhccCcCC-----------CCHHHHHHHHHHHHHccC
Q 006275 493 FEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSL-----------LSGGEKARLAFCKFMVKP 561 (652)
Q Consensus 493 ~~~~~~~~~~~~~tv~e~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~-----------LSgGqrqrv~LAral~~~ 561 (652)
++|+ +.++ ..|+.+|+.... .+..+++++.++.+|+. ...++.+.. ||||||||++|||||+.+
T Consensus 82 v~q~--~~lf-~~tv~~nl~~~~-~~~~~~~~~~l~~~gL~-~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~ 156 (275)
T cd03289 82 IPQK--VFIF-SGTFRKNLDPYG-KWSDEEIWKVAEEVGLK-SVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSK 156 (275)
T ss_pred ECCC--cccc-hhhHHHHhhhcc-CCCHHHHHHHHHHcCCH-HHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcC
Confidence 5544 3344 469999996432 23456788889999984 566777765 999999999999999999
Q ss_pred CCeEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhccEEEEEeCCEEEeecCChhhHhhh
Q 006275 562 STLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNVCFTS 631 (652)
Q Consensus 562 p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~drvi~l~~g~i~~~~g~~~~~~~~ 631 (652)
|+||||||||++||+.++..+++.|++. +.|||+||||++++.. ||||++|++|++.+ .|++++.+..
T Consensus 157 p~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~-~dri~vl~~G~i~~-~g~~~~l~~~ 226 (275)
T cd03289 157 AKILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLE-CQRFLVIEENKVRQ-YDSIQKLLNE 226 (275)
T ss_pred CCEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHh-CCEEEEecCCeEee-cCCHHHHhhC
Confidence 9999999999999999999999999864 4599999999999976 99999999999985 5888876653
No 500
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=5.7e-38 Score=360.06 Aligned_cols=213 Identities=23% Similarity=0.343 Sum_probs=168.3
Q ss_pred CceEEEeEEEEeCC-eeeeeeeeEEEECCCEEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCCC----------ceEE
Q 006275 96 SGVKLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIA 164 (652)
Q Consensus 96 ~~i~v~~ls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~L~G~~~p~~G~i~~~~~~----------~~i~ 164 (652)
..|+++|++|+|++ +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.+ ..|+
T Consensus 339 ~~i~~~~v~f~y~~~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~ 418 (592)
T PRK10790 339 GRIDIDNVSFAYRDDNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVA 418 (592)
T ss_pred CeEEEEEEEEEeCCCCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheE
Confidence 35999999999975 569999999999999999999999999999999999999999999999853 3599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhhcchhHHHHhhHHHHHHHHHHHHhCChhcHHHHHHHHhh
Q 006275 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (652)
Q Consensus 165 ~v~Q~~~~~~~~Tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (652)
|++|+|.+ ++.|+++|+...- + ... +++.++++.+ .+.+.+.++
T Consensus 419 ~v~Q~~~l-F~~Ti~~NI~~~~-~-~~d----~~i~~a~~~~---------------------------gl~~~i~~l-- 462 (592)
T PRK10790 419 MVQQDPVV-LADTFLANVTLGR-D-ISE----EQVWQALETV---------------------------QLAELARSL-- 462 (592)
T ss_pred EEccCCcc-ccchHHHHHHhCC-C-CCH----HHHHHHHHHc---------------------------CcHHHHHhc--
Confidence 99999987 5679999996421 1 000 1111111111 111122221
Q ss_pred hcCCCcccccCCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhh
Q 006275 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQL 322 (652)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRv~LAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~ 322 (652)
.-|+.+...+ ...+||||||||++|||||+.+|+||||||||++||+++.+.+.+.|++ .++|+|+|||+++.+. .
T Consensus 463 p~Gldt~i~e-~g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~-~ 540 (592)
T PRK10790 463 PDGLYTPLGE-QGNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIV-E 540 (592)
T ss_pred cccccccccC-CCCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHH-h
Confidence 1144433332 4678999999999999999999999999999999999999999888754 4799999999999885 5
Q ss_pred cCeEEEEcCCeEEEecCChHHHHHH
Q 006275 323 CTKIVETEMGVSRTYEGNYSQYVLE 347 (652)
Q Consensus 323 ~d~ii~l~~G~~~~~~g~~~~~~~~ 347 (652)
||+|++|++|++. ..|++++++..
T Consensus 541 ~D~ii~l~~G~i~-~~G~~~~L~~~ 564 (592)
T PRK10790 541 ADTILVLHRGQAV-EQGTHQQLLAA 564 (592)
T ss_pred CCEEEEEECCEEE-EEcCHHHHHhC
Confidence 9999999999984 77998887643
Done!