Query 006276
Match_columns 652
No_of_seqs 381 out of 2302
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 20:41:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006276.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006276hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2q13_A DCC-interacting protein 100.0 1.9E-57 6.6E-62 492.6 43.3 361 4-435 11-382 (385)
2 4h8s_A DCC-interacting protein 100.0 3.1E-57 1.1E-61 494.5 40.5 364 2-434 32-404 (407)
3 2q12_A DIP13 alpha, DCC-intera 100.0 2E-40 6.8E-45 341.1 30.2 237 4-244 11-254 (265)
4 2iqj_A Stromal membrane-associ 100.0 4.9E-39 1.7E-43 291.3 8.6 120 495-641 10-129 (134)
5 2crr_A Stromal membrane-associ 100.0 6.9E-39 2.4E-43 292.8 8.9 121 494-641 11-131 (141)
6 2olm_A Nucleoporin-like protei 100.0 5.5E-38 1.9E-42 286.5 8.2 123 495-642 8-130 (140)
7 3jue_A Arfgap with coiled-coil 100.0 5.7E-34 1.9E-38 306.3 12.0 127 494-643 27-153 (368)
8 3lju_X ARF-GAP with dual PH do 100.0 8.9E-33 3.1E-37 297.8 9.4 124 494-642 16-139 (386)
9 2owa_A Arfgap-like finger doma 100.0 3.6E-32 1.2E-36 246.6 6.2 109 500-636 24-132 (138)
10 2crw_A ARF GAP 3, ADP-ribosyla 100.0 2.8E-31 9.7E-36 243.2 6.5 89 499-588 16-104 (149)
11 3dwd_A ADP-ribosylation factor 100.0 1.2E-30 4.1E-35 236.3 6.3 88 497-586 23-110 (147)
12 2p57_A GTPase-activating prote 100.0 9.9E-30 3.4E-34 230.6 7.0 88 499-587 24-111 (144)
13 3sub_A ADP-ribosylation factor 100.0 2.6E-29 8.8E-34 230.7 6.3 88 499-588 8-96 (163)
14 2b0o_E UPLC1; arfgap, structur 99.9 1.7E-28 5.9E-33 256.8 10.7 121 498-641 28-148 (301)
15 1dcq_A PYK2-associated protein 99.9 1.7E-28 5.9E-33 253.8 9.5 123 498-643 3-125 (278)
16 3lvq_E ARF-GAP with SH3 domain 99.9 2E-28 7E-33 273.7 6.9 121 498-641 9-129 (497)
17 3o47_A ADP-ribosylation factor 99.9 7.3E-25 2.5E-29 232.1 7.2 91 496-588 21-111 (329)
18 2rlo_A Centaurin-gamma 1; spli 99.8 4.5E-20 1.6E-24 168.1 12.0 119 292-432 3-128 (128)
19 1wi1_A Calcium-dependent activ 99.8 2.6E-19 9E-24 160.0 12.6 97 292-428 7-110 (126)
20 2da0_A 130-kDa phosphatidylino 99.8 8E-19 2.7E-23 156.4 14.2 102 290-435 7-108 (114)
21 2rsg_A Collagen type IV alpha- 99.8 2.6E-18 8.8E-23 147.5 10.9 93 293-427 1-93 (94)
22 2d9x_A Oxysterol binding prote 99.7 5.9E-18 2E-22 152.2 11.7 103 290-433 5-109 (120)
23 2dhk_A TBC1 domain family memb 99.7 1.8E-17 6E-22 148.9 14.7 102 291-433 6-109 (119)
24 1v88_A Oxysterol binding prote 99.7 1.3E-17 4.3E-22 152.2 13.0 95 291-428 6-124 (130)
25 1x1f_A Signal-transducing adap 99.7 2.5E-17 8.5E-22 153.6 13.8 96 292-428 17-113 (149)
26 1wgq_A FYVE, rhogef and PH dom 99.7 4.5E-17 1.5E-21 143.6 13.9 96 292-428 7-103 (109)
27 1pls_A Pleckstrin homology dom 99.7 6.3E-17 2.2E-21 143.5 14.8 101 292-433 4-106 (113)
28 2p0d_A RHO GTPase-activating p 99.7 3.9E-17 1.3E-21 148.9 13.4 111 291-430 10-126 (129)
29 1v5p_A Pleckstrin homology dom 99.7 1.7E-17 6E-22 150.5 10.8 101 293-428 15-120 (126)
30 2dn6_A KIAA0640 protein; PH do 99.7 5.7E-17 2E-21 144.0 13.9 102 291-433 6-108 (115)
31 3cxb_B Pleckstrin homology dom 99.7 4.2E-17 1.4E-21 144.9 13.0 96 294-429 1-102 (112)
32 2d9v_A Pleckstrin homology dom 99.7 5.9E-17 2E-21 147.9 14.2 107 290-428 5-114 (130)
33 2coc_A FYVE, rhogef and PH dom 99.7 4.4E-17 1.5E-21 144.5 12.4 95 292-427 7-105 (112)
34 1wjm_A Beta-spectrin III; PH d 99.7 2.9E-17 9.7E-22 148.2 11.3 105 291-429 6-118 (123)
35 1fao_A Dual adaptor of phospho 99.7 5.7E-17 1.9E-21 146.7 12.6 99 291-430 16-114 (126)
36 2cof_A Protein KIAA1914; PH do 99.7 1.9E-17 6.6E-22 145.7 9.1 95 291-428 6-101 (107)
37 1upq_A PEPP1; PH domain, phosp 99.7 1E-16 3.5E-21 144.2 14.0 97 292-428 10-109 (123)
38 2cod_A Centaurin-delta 1; ARF 99.7 1.5E-16 5.1E-21 141.6 14.6 96 290-430 5-101 (115)
39 1u5d_A SKAP55, SRC kinase-asso 99.7 6.7E-17 2.3E-21 141.5 12.2 99 292-430 2-107 (108)
40 2dkp_A Pleckstrin homology dom 99.7 1.1E-16 3.8E-21 145.0 12.9 99 290-428 18-119 (128)
41 2i5f_A Pleckstrin; PH domain, 99.7 1.7E-16 5.7E-21 139.6 13.4 97 291-427 5-108 (109)
42 1v89_A Hypothetical protein KI 99.7 2E-16 6.9E-21 140.9 13.7 97 291-428 6-112 (118)
43 1v5u_A SBF1, SET binding facto 99.7 1.3E-16 4.5E-21 142.1 12.5 98 291-428 6-111 (117)
44 3rcp_A Pleckstrin homology dom 99.7 7.2E-17 2.5E-21 140.7 10.5 94 295-430 1-95 (103)
45 1x05_A Pleckstrin; PH domain, 99.7 1.5E-16 5E-21 144.6 12.8 100 291-430 16-122 (129)
46 2z0v_A SH3-containing GRB2-lik 99.7 2.6E-15 8.8E-20 151.4 22.7 191 15-220 16-228 (240)
47 3aj4_A Pleckstrin homology dom 99.7 1.5E-16 5E-21 140.9 11.7 105 291-428 3-111 (112)
48 2yry_A Pleckstrin homology dom 99.7 3.1E-16 1.1E-20 140.8 13.8 98 291-428 20-120 (122)
49 2d9y_A Pleckstrin homology dom 99.7 2.5E-16 8.4E-21 140.3 13.0 98 291-428 9-109 (117)
50 1fgy_A GRP1; PH domain, signal 99.7 2.5E-16 8.5E-21 142.3 13.1 96 292-429 4-121 (127)
51 1unq_A RAC-alpha serine/threon 99.7 7.9E-17 2.7E-21 145.6 9.6 105 291-432 6-114 (125)
52 1wg7_A Dedicator of cytokinesi 99.7 2.1E-16 7.3E-21 147.5 11.3 104 290-432 15-128 (150)
53 4a6h_A Phosphatidylinositol 4, 99.7 3.1E-16 1.1E-20 140.8 11.8 99 290-427 4-117 (120)
54 1x1g_A Pleckstrin 2; PH domain 99.7 2E-16 6.9E-21 143.6 10.6 99 291-428 16-124 (129)
55 1btn_A Beta-spectrin; signal t 99.7 2.4E-16 8.2E-21 137.8 10.6 98 295-426 1-106 (106)
56 1u5e_A SRC-associated adaptor 99.7 5.2E-16 1.8E-20 153.4 14.2 99 291-429 104-209 (211)
57 2lul_A Tyrosine-protein kinase 99.7 4.9E-16 1.7E-20 147.6 13.5 100 291-429 13-122 (164)
58 1u5f_A SRC-associated adaptor 99.7 3.7E-16 1.3E-20 145.7 12.3 100 291-430 15-121 (148)
59 2y7b_A Actin-binding protein a 99.7 2.4E-16 8.3E-21 144.0 10.4 102 292-430 4-130 (134)
60 1eaz_A Tandem PH domain contai 99.7 2.9E-16 1E-20 141.5 10.5 100 291-431 12-114 (125)
61 1btk_A Bruton'S tyrosine kinas 99.6 4.7E-16 1.6E-20 148.4 11.8 101 292-428 2-132 (169)
62 2w2x_D 1-phosphatidylinositol- 99.6 1.7E-16 5.9E-21 143.6 8.3 107 292-430 11-121 (124)
63 2j59_M RHO-GTPase activating p 99.6 6.5E-16 2.2E-20 147.1 11.7 100 293-428 3-111 (168)
64 1dro_A Beta-spectrin; cytoskel 99.6 3.8E-16 1.3E-20 140.7 9.3 106 292-429 7-120 (122)
65 1dyn_A Dynamin; signal transdu 99.6 1.2E-15 4.2E-20 134.7 12.1 95 292-426 11-115 (125)
66 1zww_A SH3-containing GRB2-lik 99.6 1.1E-13 3.7E-18 140.9 23.9 191 16-221 33-245 (256)
67 3a8p_A T-lymphoma invasion and 99.6 4.5E-15 1.5E-19 151.5 13.3 107 291-432 9-128 (263)
68 3pp2_A RHO GTPase-activating p 99.6 6.9E-15 2.3E-19 133.0 12.1 109 292-428 7-123 (124)
69 3tfm_A Myosin X; split PH doma 99.5 1.8E-14 6.1E-19 144.2 11.3 97 290-428 55-155 (228)
70 1qqg_A IRS-1, insulin receptor 99.5 1.8E-14 6.3E-19 146.9 10.7 100 291-430 8-114 (264)
71 3lju_X ARF-GAP with dual PH do 99.5 5.8E-14 2E-18 151.1 13.7 98 292-429 268-373 (386)
72 2r09_A Cytohesin-3; autoinhibi 99.5 5.1E-14 1.7E-18 149.6 12.6 95 292-428 212-328 (347)
73 2dtc_A RAL guanine nucleotide 99.5 2.2E-13 7.6E-18 122.4 13.6 103 294-428 2-112 (126)
74 3tca_A Amyloid beta A4 precurs 99.4 3.7E-13 1.3E-17 139.3 11.8 101 289-427 164-275 (291)
75 2fjl_A 1-phosphatidylinositol- 99.4 2.7E-12 9.2E-17 117.6 12.0 128 294-429 2-149 (150)
76 3a8n_A TIAM-1, T-lymphoma inva 99.3 2.6E-12 8.8E-17 130.9 9.2 107 291-431 9-127 (279)
77 2rov_A RHO-associated protein 99.3 4.8E-12 1.6E-16 112.9 9.3 97 295-428 3-115 (117)
78 2ys3_A UNC-112-related protein 99.3 1.2E-11 4.2E-16 111.0 10.4 97 292-426 8-110 (137)
79 2d9w_A Docking protein 2; PH d 99.3 3.8E-11 1.3E-15 105.7 13.0 100 291-426 10-119 (127)
80 2fic_A Bridging integrator 1; 99.3 6.6E-10 2.2E-14 112.6 24.1 194 16-219 54-249 (251)
81 1uru_A Amphiphysin; endocytosi 99.2 5.4E-09 1.9E-13 105.2 25.2 197 15-221 38-238 (244)
82 4ejn_A RAC-alpha serine/threon 99.1 1.3E-10 4.4E-15 127.5 8.9 102 292-430 5-110 (446)
83 3hk0_A Growth factor receptor- 99.1 3.4E-10 1.2E-14 114.0 9.7 101 290-428 129-240 (256)
84 3mpx_A FYVE, rhogef and PH dom 99.0 9.1E-09 3.1E-13 112.5 20.9 100 292-433 243-342 (434)
85 4gmv_A RAS-associated and plec 99.0 8.2E-10 2.8E-14 112.6 11.4 100 291-428 156-266 (281)
86 1w1g_A HPDK1, 3-phosphoinositi 98.9 5E-09 1.7E-13 95.8 11.6 95 290-433 49-144 (151)
87 4f7h_A Fermitin family homolog 98.9 5.3E-09 1.8E-13 96.1 10.8 97 292-426 46-148 (173)
88 4bbk_A Kindlin-1, fermitin fam 98.9 4.9E-09 1.7E-13 95.3 10.1 97 292-426 25-127 (165)
89 4avm_A Bridging integrator 2; 98.8 8E-07 2.7E-11 88.9 24.7 195 16-221 35-232 (237)
90 4a3a_A Amphiphysin; structural 98.8 6.3E-06 2.2E-10 82.6 28.4 195 16-221 40-237 (243)
91 1i4d_A Arfaptin 2, partner of 98.7 2.9E-06 9.8E-11 83.0 22.7 187 18-211 8-201 (224)
92 2coa_A Protein kinase C, D2 ty 98.6 8.1E-08 2.8E-12 84.5 8.9 103 290-427 5-118 (125)
93 2d9z_A Protein kinase C, NU ty 98.6 4.3E-07 1.5E-11 80.1 11.7 102 291-428 6-123 (129)
94 2vrw_B P95VAV, VAV1, proto-onc 98.6 1E-05 3.6E-10 87.3 25.3 100 292-431 233-338 (406)
95 1zc3_B Exocyst complex protein 98.5 1.4E-06 4.8E-11 76.8 12.3 105 292-432 7-111 (113)
96 3ky9_A Proto-oncogene VAV; cal 98.5 9.9E-06 3.4E-10 91.8 22.0 100 292-431 405-510 (587)
97 2ykt_A Brain-specific angiogen 98.2 0.0002 6.9E-09 71.8 22.5 195 15-211 16-224 (253)
98 2pz1_A RHO guanine nucleotide 98.0 0.00037 1.3E-08 76.5 22.5 105 292-433 333-445 (466)
99 1v61_A RAC/CDC42 guanine nucle 98.0 3.3E-05 1.1E-09 69.6 10.8 56 375-430 72-128 (132)
100 3odw_A RHO guanine nucleotide 98.0 0.0012 4.1E-08 73.8 24.7 114 292-432 411-528 (536)
101 2dfk_A Collybistin II; DH doma 97.9 0.00054 1.8E-08 73.8 20.9 105 292-433 256-368 (402)
102 3qwm_A Iqsec1, IQ motif and SE 97.9 0.00012 4E-09 66.2 12.0 105 292-431 12-125 (140)
103 1dbh_A Protein (human SOS 1); 97.9 0.0014 4.8E-08 69.1 22.5 103 292-428 246-349 (354)
104 3ok8_A Brain-specific angiogen 97.9 0.0031 1.1E-07 61.3 22.2 197 12-211 11-213 (222)
105 3p6a_A RHO guanine nucleotide 97.8 0.0064 2.2E-07 64.5 26.8 109 292-430 258-373 (377)
106 2d1l_A Metastasis suppressor p 97.8 0.0024 8.3E-08 63.6 21.3 126 11-136 11-140 (253)
107 3t06_A PDZ-rhogef, RHO guanine 97.8 0.014 4.6E-07 63.0 29.3 112 292-430 294-410 (418)
108 1xcg_A PDZ-rhogef, RHO guanine 97.8 0.002 6.9E-08 68.2 21.8 112 292-430 252-368 (368)
109 1v5m_A SH2 and PH domain-conta 97.8 0.0002 6.7E-09 63.4 11.1 104 290-429 15-131 (136)
110 4akv_A Sorting nexin-33; trans 97.7 0.0013 4.6E-08 70.2 19.6 155 52-216 227-383 (386)
111 2efl_A Formin-binding protein 97.6 0.018 6.2E-07 58.9 25.5 172 7-182 3-205 (305)
112 1txd_A RHO guanine nucleotide 97.5 0.0073 2.5E-07 64.4 21.9 117 292-434 256-375 (385)
113 2lg1_A A-kinase anchor protein 97.5 0.00064 2.2E-08 65.1 11.2 103 291-431 69-175 (185)
114 3dyt_A Sorting nexin-9; 3-heli 97.4 0.017 5.8E-07 61.2 22.1 153 52-214 207-361 (366)
115 3tfm_A Myosin X; split PH doma 97.3 0.00016 5.4E-09 71.8 4.9 38 290-329 18-55 (228)
116 1kz7_A Guanine nucleotide exch 97.2 0.0028 9.6E-08 66.9 13.7 109 292-432 209-329 (353)
117 2efk_A CDC42-interacting prote 97.2 0.16 5.3E-06 51.8 26.3 161 23-184 9-200 (301)
118 2z0q_A XPLN, RHO guanine nucle 97.2 0.092 3.2E-06 54.8 24.8 35 393-427 307-345 (346)
119 3ksy_A SOS-1, SON of sevenless 97.2 0.011 3.9E-07 71.1 19.8 104 292-430 443-548 (1049)
120 1nty_A Triple functional domai 97.1 0.004 1.4E-07 64.4 12.7 103 292-430 202-310 (311)
121 3jzy_A Intersectin 2; C2 domai 97.1 8.9E-05 3E-09 82.3 0.0 116 292-434 252-368 (510)
122 1foe_A T-lymphoma invasion and 97.0 0.42 1.4E-05 50.4 27.6 59 375-433 304-371 (377)
123 1mai_A Phospholipase C delta-1 96.9 0.0036 1.2E-07 56.3 9.3 38 393-430 84-123 (131)
124 2v0o_A FCHO2, FCH domain only 96.9 0.36 1.2E-05 48.4 25.3 91 23-114 20-110 (276)
125 3haj_A Human pacsin2 F-BAR; pa 96.8 0.091 3.1E-06 57.8 21.6 120 77-197 82-232 (486)
126 2x3v_A Syndapin I, protein kin 96.8 0.16 5.5E-06 52.8 22.4 116 76-192 79-225 (337)
127 3ml4_A Protein DOK-7; tyrosine 96.8 0.0036 1.2E-07 60.5 8.6 97 292-426 8-111 (224)
128 2rgn_B RHOA/RAC/CDC42 exchange 96.7 0.011 3.7E-07 62.3 12.4 106 292-430 206-320 (354)
129 3g9g_A Suppressor of yeast pro 96.6 0.1 3.4E-06 53.1 18.2 168 21-204 43-239 (287)
130 4dyl_A Tyrosine-protein kinase 96.6 0.35 1.2E-05 51.8 23.5 155 11-180 13-195 (406)
131 2q13_A DCC-interacting protein 96.6 0.33 1.1E-05 51.4 23.2 155 19-174 19-176 (385)
132 3aco_A Pacsin2, protein kinase 96.5 0.22 7.5E-06 52.1 21.3 116 76-192 88-234 (350)
133 2q12_A DIP13 alpha, DCC-intera 96.5 0.5 1.7E-05 47.3 22.7 212 19-234 19-237 (265)
134 4h8s_A DCC-interacting protein 96.3 0.9 3.1E-05 48.4 24.7 122 19-141 42-165 (407)
135 3abh_A Pacsin2, protein kinase 96.0 0.15 5.2E-06 52.3 16.1 38 76-113 88-125 (312)
136 3v5w_A G-protein coupled recep 95.7 0.042 1.4E-06 62.7 11.3 95 291-428 557-652 (689)
137 3m3w_A Pacsin3, protein kinase 95.0 2.8 9.7E-05 43.0 21.8 37 76-112 79-115 (320)
138 3i2w_A Syndapin, LD46328P; EFC 94.2 3.6 0.00012 41.4 20.0 37 77-113 68-104 (290)
139 3caz_A BAR protein; thermo-aci 94.0 3.9 0.00013 38.0 23.8 82 101-183 101-183 (294)
140 1z87_A Alpha-1-syntrophin; pro 93.7 0.12 3.9E-06 52.1 7.4 53 376-428 207-262 (263)
141 1fho_A UNC-89; pleckstrin homo 93.3 0.19 6.5E-06 44.1 7.2 101 292-430 9-114 (119)
142 2adz_A Alpha-1-syntrophin; pro 93.0 0.18 6.1E-06 47.3 6.8 54 375-428 121-177 (178)
143 3zvr_A Dynamin-1; hydrolase, D 86.6 51 0.0018 37.9 22.6 92 293-424 540-641 (772)
144 2fic_A Bridging integrator 1; 78.5 51 0.0017 32.0 17.2 41 21-61 52-92 (251)
145 1gnf_A Transcription factor GA 78.1 1.4 4.7E-05 31.7 2.6 38 511-548 3-41 (46)
146 2vut_I AREA, nitrogen regulato 71.1 2.5 8.7E-05 29.8 2.5 35 513-547 2-37 (43)
147 3dfx_A Trans-acting T-cell-spe 68.2 2.3 7.9E-05 32.7 1.9 38 510-547 5-43 (63)
148 4gat_A Nitrogen regulatory pro 67.3 3.9 0.00013 31.7 3.0 37 511-547 8-45 (66)
149 2v0o_A FCHO2, FCH domain only 65.0 1.1E+02 0.0036 29.9 27.7 23 114-136 134-156 (276)
150 3qwe_A GMIP, GEM-interacting p 59.6 1.4E+02 0.0049 29.6 23.5 159 22-184 15-205 (279)
151 4hc9_A Trans-acting T-cell-spe 58.4 4.9 0.00017 34.8 2.4 37 512-548 5-42 (115)
152 2zkm_X 1-phosphatidylinositol- 56.2 21 0.0007 41.4 7.9 38 394-431 96-138 (799)
153 1u5k_A Hypothetical protein; O 54.7 5 0.00017 39.4 2.1 49 509-575 147-195 (244)
154 3ohm_B 1-phosphatidylinositol- 53.4 19 0.00065 42.1 7.0 38 394-431 100-142 (885)
155 3qwe_A GMIP, GEM-interacting p 49.8 2.1E+02 0.0071 28.5 19.7 113 79-193 97-220 (279)
156 2kae_A GATA-type transcription 49.1 5.1 0.00017 31.5 0.9 37 511-548 7-46 (71)
157 3qr0_A Phospholipase C-beta (P 46.8 26 0.0009 40.6 6.7 38 394-431 103-145 (816)
158 2z0v_A SH3-containing GRB2-lik 45.3 2.1E+02 0.0073 27.4 21.6 188 18-225 12-205 (240)
159 1d4u_A Nucleotide excision rep 40.2 6.6 0.00023 33.7 0.3 31 511-541 4-35 (111)
160 3ghg_A Fibrinogen alpha chain; 38.8 4.1E+02 0.014 28.7 14.0 20 164-183 107-126 (562)
161 3mq9_A Bone marrow stromal ant 38.7 3.5E+02 0.012 28.4 14.0 16 6-21 196-211 (471)
162 1hs7_A Syntaxin VAM3; UP-and-D 38.3 47 0.0016 27.7 5.2 30 6-35 32-62 (97)
163 3g9m_A Glucocorticoid receptor 37.3 15 0.00053 30.1 2.1 30 511-543 1-30 (90)
164 2j1d_G DAAM1, disheveled-assoc 37.1 2.6E+02 0.009 29.9 12.6 26 18-43 187-212 (483)
165 3a98_B Engulfment and cell mot 35.6 1.9E+02 0.0065 27.3 9.8 32 395-426 116-148 (203)
166 3plt_A Sphingolipid long chain 34.9 3.2E+02 0.011 26.4 18.1 95 25-125 20-116 (234)
167 4hc9_A Trans-acting T-cell-spe 33.8 25 0.00084 30.3 2.9 39 510-548 57-96 (115)
168 1r4i_A Androgen receptor; AR, 33.3 18 0.00062 30.7 1.9 32 510-544 5-36 (105)
169 1hcq_A Protein (estrogen recep 32.3 22 0.00076 28.8 2.2 31 511-544 3-33 (84)
170 2p22_C Protein SRN2; endosome, 31.6 2.6E+02 0.0088 26.1 9.8 54 77-134 129-183 (192)
171 3swy_A Cyclic nucleotide-gated 31.6 1.4E+02 0.0048 21.2 6.5 38 207-244 5-42 (46)
172 1oxz_A ADP-ribosylation factor 31.2 3E+02 0.01 25.5 10.1 86 137-228 36-128 (186)
173 1tjl_A DNAK suppressor protein 31.2 13 0.00043 33.8 0.6 34 510-543 109-143 (151)
174 2ebl_A COUP transcription fact 30.9 19 0.00067 29.5 1.7 31 511-544 6-36 (89)
175 2nll_B Protein (thyroid hormon 30.8 19 0.00065 30.4 1.6 29 513-544 2-30 (103)
176 2han_B Ecdysone receptor; tran 29.5 24 0.00082 30.6 2.1 31 511-544 7-37 (119)
177 1dl6_A Transcription factor II 29.2 26 0.00089 26.2 2.0 28 513-541 12-39 (58)
178 3dzy_D Peroxisome proliferator 28.0 22 0.00074 37.9 1.9 32 510-544 48-79 (419)
179 2a66_A Orphan nuclear receptor 28.0 18 0.00062 31.1 1.0 32 510-544 7-38 (113)
180 2han_A Protein ultraspiracle; 27.4 28 0.00096 28.7 2.1 30 512-544 10-39 (93)
181 1uru_A Amphiphysin; endocytosi 27.3 3.9E+02 0.013 25.1 22.6 28 20-47 36-63 (244)
182 3swf_A CGMP-gated cation chann 26.8 2E+02 0.0068 22.5 6.6 40 208-247 8-47 (74)
183 2uzg_A Ubiquitin carboxyl-term 26.0 37 0.0013 28.2 2.6 28 510-537 23-53 (97)
184 1cit_A NGFI-B, protein (orphan 26.0 34 0.0012 28.0 2.3 28 514-544 2-29 (89)
185 2jqq_A Conserved oligomeric go 25.6 4.1E+02 0.014 24.7 12.2 113 102-232 58-174 (204)
186 4glq_A Methyl-accepting chemot 25.1 43 0.0015 30.4 3.2 41 530-588 119-159 (171)
187 3hie_A Protein PSL1, exocyst c 24.8 1.1E+02 0.0039 28.0 5.8 41 394-435 115-155 (171)
188 1naf_A ADP-ribosylation factor 24.7 3E+02 0.01 24.9 8.6 85 137-227 20-111 (158)
189 1dsz_A RAR-alpha, retinoic aci 24.5 29 0.00099 28.2 1.6 29 513-544 5-33 (86)
190 2ovc_A Potassium voltage-gated 24.4 89 0.003 20.6 3.6 29 7-35 3-31 (33)
191 1a6y_A Orphan nuclear receptor 24.2 30 0.001 28.6 1.7 30 512-544 7-36 (94)
192 1ynw_B Retinoic acid receptor 24.1 27 0.00092 29.2 1.4 30 512-544 3-32 (99)
193 1deq_A Fibrinogen (alpha chain 23.4 6.3E+02 0.022 26.1 13.7 23 81-103 111-133 (390)
194 1lo1_A Steroid hormone recepto 23.3 23 0.00078 29.6 0.7 30 512-544 4-33 (98)
195 1kb2_A Vitamin D3 receptor; VD 23.2 29 0.001 29.6 1.5 30 512-544 6-35 (110)
196 2kgo_A Uncharacterized protein 22.6 8.9 0.0003 32.7 -1.9 32 512-543 56-88 (108)
197 1dsz_B RXR-alpha, retinoic aci 22.4 24 0.00081 28.7 0.7 31 511-544 4-34 (85)
198 3obv_E Protein diaphanous homo 22.1 4.2E+02 0.014 28.1 10.7 36 8-43 160-201 (457)
199 2xi5_A RNA polymerase L, L-pro 21.9 1.2E+02 0.0041 27.8 5.2 60 130-195 5-64 (184)
No 1
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=100.00 E-value=1.9e-57 Score=492.64 Aligned_cols=361 Identities=23% Similarity=0.370 Sum_probs=297.4
Q ss_pred CccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHhhC-----CCCCCCccccCchhH
Q 006276 4 NKLDDSPMFRKQIQGLEESAEVLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALETFGG-----GHNDPISVAFGGPVM 78 (652)
Q Consensus 4 ~~~~DSP~FRasv~~~E~~le~l~~~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f~~-----~~~d~~~~~~~g~~L 78 (652)
+|++|||.||++|+++|++++.++.||++++|.|++++++..+++.+...|+++|..++. +.+|+.. +++|
T Consensus 11 e~~~DSP~FR~~l~~~E~~~~~l~~~l~kl~k~~~~~~~a~~~~~~a~~~f~~~L~~~~~~~~~~~~~d~~v----~~~l 86 (385)
T 2q13_A 11 ETLEDSPQTRSLLGVFEEDATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKEYEKQRFPLGGDDEVM----SSTL 86 (385)
T ss_dssp GTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCCCC---CCHH----HHHH
T ss_pred HhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcHHH----HHHH
Confidence 799999999999999999999999999999999999999988888889999999998765 2234432 3589
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCChhhH-hHHHHH
Q 006276 79 TKFTIALREIGTYKEVLRSQVEHMLNDRLLQYVNIDLHEVKEARKCFDKASLLYDQAREKFLSLRKGTKTDVA-AILEEE 157 (652)
Q Consensus 79 ~~f~~~lkel~~~~~~l~~~~~~~i~~pL~~f~~~di~~~ke~Rk~Fek~~~~YD~al~ky~s~~K~k~~~~~-~E~~~e 157 (652)
.+|+.+++++..++..|+.++++.++.||++|+++||+++++.||.||+++.+||++++||++++|+++++.. .|++.+
T Consensus 87 ~~f~~~~~ei~~~~~~l~~~~~~~~~~PL~~f~~~di~~~ke~kk~fek~~~~yd~al~k~~~~~k~k~~e~~~~ea~~~ 166 (385)
T 2q13_A 87 QQFSKVIDELSSCHAVLSTQLADAMMFPITQFKERDLKEILTLKEVFQIASNDHDAAINRYSRLSKKRENDKVKYEVTED 166 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999877644 677799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHhHHHHHH
Q 006276 158 LHSARSAFEQARFSLVTALSNVEAKKRFEFLEAVSGTMDAHLRYFKQGYELL-HQMEPYINQVLTYAQQSRERSNYEQAA 236 (652)
Q Consensus 158 L~~~Rk~f~~aslDyv~~l~~l~~~k~~e~le~l~~~~~aq~~ff~~g~e~~-~~l~~~l~el~~~lq~~r~~~~~~~~~ 236 (652)
|+++|+.|++++|||+..|++++.++++++|++|+.|+++|.+||++|++++ ++++||++++...++++|.+++++.+.
T Consensus 167 l~~~rk~f~~~~ldy~~~l~~l~~rk~~e~le~l~~~~~a~~~ff~~g~~~~~~~~~~~~~~l~~~l~~~r~~~~~~~~~ 246 (385)
T 2q13_A 167 VYTSRKKQHQTMMHYFCALNTLQYKKKIALLEPLLGYMQAQISFFKMGSENLNEQLEEFLANIGTSVQNVRREMDSDIET 246 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998 599999999999999999999988777
Q ss_pred HHHHHHHHHhhhhhhhhhcCCCCCCCCCCCCcccccCCchhhHHHHHhhhccCCCceeeeEEEeccCCC--CCCCceeEE
Q 006276 237 LNERMQEYKRQIDRESRWASNGSNGSPNGDGIQAIGRSSHKMIEAVMQSAAKGKVQTIRQGYLSKRSSN--LRGDWKRRF 314 (652)
Q Consensus 237 l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~k~G~L~K~~~~--~~~~WkrR~ 314 (652)
+.+.++.+.. ....+. .|..+.. + .......++|+|||+|+++. .++.|+|||
T Consensus 247 ~~~~~~~l~~----~~~~~~-----~~~~~~~---------------~-~~~~~~~~~k~G~L~K~~~~~~~~~~WkkRw 301 (385)
T 2q13_A 247 MQQTIEDLEV----ASDPLY-----VPDPDPT---------------K-FPVNRNLTRKAGYLNARNKTGLVSSTWDRQF 301 (385)
T ss_dssp HHHHHHHHHH----HHGGGS-----SSSCCTT---------------T-SCCCCCCSCCEEEEEEC--------CCEEEE
T ss_pred HHHHHHHHhc----cCCCCC-----CCCCccc---------------c-cccCCCCccEEEEEEEecCCCCCcCCceeEE
Confidence 6666554321 111111 1111100 0 00112367899999999765 345799999
Q ss_pred EEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccccccceeecccceeeeCCCCCCCc
Q 006276 315 FVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKSAARHTVNLLTSTIKVDADQSDLR 394 (652)
Q Consensus 315 f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~l~~~~vk~~~~~~~rr 394 (652)
|+|+ +|.|+||++... .+.+.|+|..|+|+.. +..+|+
T Consensus 302 fvL~-~~~L~y~k~~~~----------------------------------------~~~~~i~l~~~~v~~~-~~~~r~ 339 (385)
T 2q13_A 302 YFTQ-GGNLMSQARGDV----------------------------------------AGGLAMDIDNCSVMAV-DCEDRR 339 (385)
T ss_dssp EEEE-TTEEEEECSSCS----------------------------------------SCEEEEECTTCEEEEE-CCTTCS
T ss_pred EEEE-CCEEEEecCCCc----------------------------------------CCCceEEccceEEEec-cccCCC
Confidence 9999 566777766211 1235678888988763 456889
Q ss_pred ccEEEEeCC--eeEEEEeCCHHHHHHHHHHHHHHHHHhhccCC
Q 006276 395 FCFRIISPT--KNYTLQAESALDQMDWIEKITGVIASLLSSQA 435 (652)
Q Consensus 395 fcF~I~t~~--r~~~lqA~se~e~~~Wi~ai~~ai~~~l~~~~ 435 (652)
|||+|++++ ++|+|||+|++||++||.||+.+|..++....
T Consensus 340 ~~F~i~t~~~~~~~~l~A~s~~e~~~Wi~ai~~~~~~~~~~~~ 382 (385)
T 2q13_A 340 YCFQITSFDGKKSSILQAESKKDHEEWICTINNISKQIYLSEN 382 (385)
T ss_dssp SEEEEECTTSCBCCCEECSSHHHHHHHHHHHHHHHTTCC----
T ss_pred ceEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHhhccccC
Confidence 999999999 89999999999999999999999987665433
No 2
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=100.00 E-value=3.1e-57 Score=494.53 Aligned_cols=364 Identities=20% Similarity=0.299 Sum_probs=297.0
Q ss_pred CCCccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHhhCC---CCCCCccccCchhH
Q 006276 2 HFNKLDDSPMFRKQIQGLEESAEVLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALETFGGG---HNDPISVAFGGPVM 78 (652)
Q Consensus 2 ~~~~~~DSP~FRasv~~~E~~le~l~~~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f~~~---~~d~~~~~~~g~~L 78 (652)
+=+|++|||.||++|++||++|+.+++||++++|.|+++++++.+++.+...|++.|..+... ..+.... ...+|
T Consensus 32 l~Ea~~DSP~FRa~l~~~E~~~~~l~~~l~kl~k~~~~~~~~~~~~~~a~~~f~~~l~~~~~~~~~~~~~d~~--~~~~l 109 (407)
T 4h8s_A 32 LEEALQDSPQTRSLLSVFEEDAGTLTDYTNQLLQAMQRVYGAQNEMCLATQQLSKQLLAYEKQNFALGKGDEE--VISTL 109 (407)
T ss_dssp STTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGSCCC----CHH--HHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCcHH--HHHHH
Confidence 348999999999999999999999999999999999999999999988999999999776532 1111111 13479
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCChhhH-hHHHHH
Q 006276 79 TKFTIALREIGTYKEVLRSQVEHMLNDRLLQYVNIDLHEVKEARKCFDKASLLYDQAREKFLSLRKGTKTDVA-AILEEE 157 (652)
Q Consensus 79 ~~f~~~lkel~~~~~~l~~~~~~~i~~pL~~f~~~di~~~ke~Rk~Fek~~~~YD~al~ky~s~~K~k~~~~~-~E~~~e 157 (652)
.+|+..+++++.++..|+.++++.++.||.+|++++|+++++.||+||+++.+||++++||++++|+++++.+ .|++.+
T Consensus 110 ~~f~~~~~ei~~~~~~L~~~~~~~i~~pL~~f~k~di~~~ke~kK~Fek~~~~Yd~~l~Ky~~~~k~k~~~~~~~e~~~~ 189 (407)
T 4h8s_A 110 HYFSKVVDELNLLHTELAKQLADTMVLPIIQFREKDLTEVSTLKDLFGLASNEHDLSMAKYSRLPKKKENEKVKTEVGKE 189 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999887765 477889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHhHHHHHH
Q 006276 158 LHSARSAFEQARFSLVTALSNVEAKKRFEFLEAVSGTMDAHLRYFKQGYELL-HQMEPYINQVLTYAQQSRERSNYEQAA 236 (652)
Q Consensus 158 L~~~Rk~f~~aslDyv~~l~~l~~~k~~e~le~l~~~~~aq~~ff~~g~e~~-~~l~~~l~el~~~lq~~r~~~~~~~~~ 236 (652)
|+++|+.|++++|||+..|++++.++++++|+.+++|++++.+||++|++++ .++++|++.+...++.++...+.+.+.
T Consensus 190 l~~~Rk~f~~asldyv~~l~~lq~rk~~e~le~l~~~~~a~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 269 (407)
T 4h8s_A 190 VAAARRKQHLSSLQYYCALNALQYRKQMAMMEPMIGFAHGQINFFKKGAEMFSKRMDSFLSSVADMVQSIQVELEAEAEK 269 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998 579999999999999999888866554
Q ss_pred HHHHHHHHHhhhhhhhhhcCCCCCCCCCCCCcccccCCchhhHHHHHhhhccCCCceeeeEEEeccCC--CCCCCceeEE
Q 006276 237 LNERMQEYKRQIDRESRWASNGSNGSPNGDGIQAIGRSSHKMIEAVMQSAAKGKVQTIRQGYLSKRSS--NLRGDWKRRF 314 (652)
Q Consensus 237 l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~k~G~L~K~~~--~~~~~WkrR~ 314 (652)
+...++.+ .. .......|..+... .......+.|+|||+|+++ ..+++|+|||
T Consensus 270 ~~~~~~~~----~~-----~~~~~~~~~~~~~~----------------~~~~~~~~~k~G~L~k~~~~g~~~~~W~rrw 324 (407)
T 4h8s_A 270 MRVSQQEL----LS-----VDESVYTPDSDVAA----------------PQINRNLIQKAGYLNLRNKTGLVTTTWERLY 324 (407)
T ss_dssp HHHHHHHH----HC-----SCTTTTCTTSCSSS----------------CCCCCSCSCCEEEEEEEEECSSSCEEEEEEE
T ss_pred HHHHHHhh----hc-----ccccccCCCCCccc----------------ccccCCcceeeceeeeeccCCCCCCCceEEE
Confidence 44333322 11 11111112211110 0112346789999999853 3468899999
Q ss_pred EEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccccccceeecccceeeeCCCCCCCc
Q 006276 315 FVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKSAARHTVNLLTSTIKVDADQSDLR 394 (652)
Q Consensus 315 f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~l~~~~vk~~~~~~~rr 394 (652)
|||+ +|.|+||+..... +...++|..|+|++ .+..+|+
T Consensus 325 fvl~-~~~l~y~~~~~~~----------------------------------------~~~~~~l~~~~v~~-~~~~~r~ 362 (407)
T 4h8s_A 325 FFTQ-GGNLMCQPRGAVA----------------------------------------GGLIQDLDNCSVMA-VDCEDRR 362 (407)
T ss_dssp EEEC-SSCEECCCTTCSS----------------------------------------CCCCBCSSCCEEEE-ECCTTCS
T ss_pred EEEE-CCEEEEEeCCCCC----------------------------------------CCeEEECCceEEEE-CCCCCCC
Confidence 9998 6778887654321 12345678899986 4567899
Q ss_pred ccEEEEeCC--eeEEEEeCCHHHHHHHHHHHHHHHHHhhccC
Q 006276 395 FCFRIISPT--KNYTLQAESALDQMDWIEKITGVIASLLSSQ 434 (652)
Q Consensus 395 fcF~I~t~~--r~~~lqA~se~e~~~Wi~ai~~ai~~~l~~~ 434 (652)
|||+|++|+ ++|+|||+|++||++||.||+++|..++...
T Consensus 363 ~cF~i~~~~~~~~~~l~A~s~~e~~~Wi~ai~~a~~~~~~~~ 404 (407)
T 4h8s_A 363 YCFQITTPNGKSGIILQAESRKENEEWICAINNISRQIYLTD 404 (407)
T ss_dssp SEEEEECTTSSCCEEEECSSSHHHHHHHHHHHHHHSCC----
T ss_pred ceEEEEecCCCceEEEEcCCHHHHHHHHHHHHHHHHHhhccc
Confidence 999999986 6899999999999999999999998776543
No 3
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=100.00 E-value=2e-40 Score=341.15 Aligned_cols=237 Identities=22% Similarity=0.360 Sum_probs=217.4
Q ss_pred CccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHhhC-----CCCCCCccccCchhH
Q 006276 4 NKLDDSPMFRKQIQGLEESAEVLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALETFGG-----GHNDPISVAFGGPVM 78 (652)
Q Consensus 4 ~~~~DSP~FRasv~~~E~~le~l~~~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f~~-----~~~d~~~~~~~g~~L 78 (652)
+|++|||.||++|+++|++++.++.||++++|.|++++++...++.++..|+++|..|+. +..|+.. +++|
T Consensus 11 e~~~DSP~FR~~l~~~E~~~~~l~~~l~kl~k~~~~~~~a~~~~~~a~~~f~~~L~~~~~~~~~~~~~d~~~----~~~L 86 (265)
T 2q12_A 11 ETLEDSPQTRSLLGVFEEDATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKEYEKQRFPLGGDDEVM----SSTL 86 (265)
T ss_dssp --CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCCC-----CHH----HHHH
T ss_pred HhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcHHH----HHHH
Confidence 799999999999999999999999999999999999999988888889999999999874 2334332 4689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCChh-hHhHHHHH
Q 006276 79 TKFTIALREIGTYKEVLRSQVEHMLNDRLLQYVNIDLHEVKEARKCFDKASLLYDQAREKFLSLRKGTKTD-VAAILEEE 157 (652)
Q Consensus 79 ~~f~~~lkel~~~~~~l~~~~~~~i~~pL~~f~~~di~~~ke~Rk~Fek~~~~YD~al~ky~s~~K~k~~~-~~~E~~~e 157 (652)
.+|+.++++++.++..++.++++.++.||++|+++||+++++.||.||+++.+||++++||++++|+++++ .++|++.+
T Consensus 87 ~~f~~~l~ei~~~~~~l~~~~~~~~~~PL~~f~~~dlk~~ke~kk~fdk~~~~yd~al~k~~~~~k~k~~e~~l~Ea~~~ 166 (265)
T 2q12_A 87 QQFSKVIDELSSCHAVLSTQLADAMMFPITQFKERDLKEILTLKEVFQIASNDHDAAINRYSRLSKKRENDKVKYEVTED 166 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998764 46899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHhHHHHHH
Q 006276 158 LHSARSAFEQARFSLVTALSNVEAKKRFEFLEAVSGTMDAHLRYFKQGYELLH-QMEPYINQVLTYAQQSRERSNYEQAA 236 (652)
Q Consensus 158 L~~~Rk~f~~aslDyv~~l~~l~~~k~~e~le~l~~~~~aq~~ff~~g~e~~~-~l~~~l~el~~~lq~~r~~~~~~~~~ 236 (652)
|+.+|+.|++++|||+..|++++.++++++|++|++|+++|.+||++|++++. +++||++++..+++++|++++.+++.
T Consensus 167 l~~~Rk~f~~~~ldyv~~l~~l~~kk~~e~le~l~~~~~a~~~ff~~g~e~~~~~~~p~~~~l~~~l~~~r~~~~~~~~~ 246 (265)
T 2q12_A 167 VYTSRKKQHQTMMHYFCALNTLQYKKKIALLEPLLGYMQAQISFFKMGSENLNEQLEEFLANIGTSVQNVRREMDSDIET 246 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999995 99999999999999999999988777
Q ss_pred HHHHHHHH
Q 006276 237 LNERMQEY 244 (652)
Q Consensus 237 l~~~~~~~ 244 (652)
+.+++..+
T Consensus 247 ~~~~~~~l 254 (265)
T 2q12_A 247 MQQTIEDL 254 (265)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76666544
No 4
>2iqj_A Stromal membrane-associated protein 1-like; zinc, structural genomics, structural genomics consortium, SGC, protein transport; 1.90A {Homo sapiens}
Probab=100.00 E-value=4.9e-39 Score=291.32 Aligned_cols=120 Identities=38% Similarity=0.653 Sum_probs=108.9
Q ss_pred cccCcccHHHHHHccCCCCccccCCCCCCCceeeccceeeeccchhhhcccCCCccceeEeecCCCCCCHHHHHHHHHhc
Q 006276 495 SCVKSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLG 574 (652)
Q Consensus 495 ~~~~~~~~~~~l~~~~~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~lg~~is~vks~~ld~~~w~~~~i~~~~~~G 574 (652)
..+++++.++.|++.|+|+.|||||+++|+|+|+|+|||||++||||||+||+|||+||||+|| .|++++|+.|+.+|
T Consensus 10 ~~e~~~~~l~~L~~~p~N~~CaDCg~~~P~WaS~n~GvfiC~~CsgiHR~lG~hiS~VkSl~ld--~w~~~~l~~m~~~G 87 (134)
T 2iqj_A 10 DVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLD--QWTQEQIQCMQEMG 87 (134)
T ss_dssp ---CCHHHHHHHTTSGGGGBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTS--CCCHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHcCcCCCcCCcCcCCCCCeEEecCCEEEhHhhhHHHhcCCCCCCceeecccc--CCCHHHHHHHHHHc
Confidence 4456788999999999999999999999999999999999999999999999999999999999 79999999999999
Q ss_pred hHHHHHHHHhhcccccccccCCCCCCCCCCCcchhhccCCCCCCCCHHHHHHHHHHhhcCCCCccCC
Q 006276 575 NAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKVQYPLWPLRF 641 (652)
Q Consensus 575 N~~~n~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~i~~kY~~~~f~~~~ 641 (652)
|.++|.+||+++|+. +.+|.+ .+.+|+||++||++|+|+.+.
T Consensus 88 N~~an~~~e~~lp~~----------------------~~~P~~---~~~~e~fIr~KY~~k~f~~~~ 129 (134)
T 2iqj_A 88 NGKANRLYEAYLPET----------------------FRRPQI---DPAVEGFIRDKYEKKKYMDRS 129 (134)
T ss_dssp HHHHHHHHTTTCCSS----------------------CCCCCS---HHHHHHHHHHHHTSCTTCCTT
T ss_pred hHHHHHHHHhcCCcc----------------------CCCCCc---hHHHHHHHHHHHhCCeeeCCc
Confidence 999999999999873 356654 357899999999999999864
No 5
>2crr_A Stromal membrane-associated protein SMAP1B; arfgap domain, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=100.00 E-value=6.9e-39 Score=292.83 Aligned_cols=121 Identities=37% Similarity=0.642 Sum_probs=110.6
Q ss_pred ccccCcccHHHHHHccCCCCccccCCCCCCCceeeccceeeeccchhhhcccCCCccceeEeecCCCCCCHHHHHHHHHh
Q 006276 494 RSCVKSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSL 573 (652)
Q Consensus 494 ~~~~~~~~~~~~l~~~~~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~lg~~is~vks~~ld~~~w~~~~i~~~~~~ 573 (652)
...+++++.++.|++.|+|+.|||||+++|+|||+|+|||||++||||||+||+|||+||||+|| .|++++|++|+.+
T Consensus 11 ~~~e~~~~~l~~L~~~p~N~~CaDCga~~P~WaS~n~GvfiC~~CsgiHR~LG~hiS~VkSl~ld--~w~~~~l~~m~~~ 88 (141)
T 2crr_A 11 KLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLD--QWTAEQIQCMQDM 88 (141)
T ss_dssp TTTTCHHHHHHHHHHSGGGSSCSSSCCSSCCSEETTTTEECCHHHHHHHHHHCTTTCCCBCSSSS--CCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCccCCcCCCCCCCCCCeEEeccCeEEhhhhhHhHhcCCCCCCeeeECCCC--CCCHHHHHHHHHH
Confidence 34456788999999999999999999999999999999999999999999999999999999999 7999999999999
Q ss_pred chHHHHHHHHhhcccccccccCCCCCCCCCCCcchhhccCCCCCCCCHHHHHHHHHHhhcCCCCccCC
Q 006276 574 GNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKVQYPLWPLRF 641 (652)
Q Consensus 574 GN~~~n~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~i~~kY~~~~f~~~~ 641 (652)
||.++|++||+++|+. +.+|.+ ...+|+|||+||++|+|+.+.
T Consensus 89 GN~~an~~~e~~lp~~----------------------~~~P~~---~~~~e~fIr~KY~~k~f~~~~ 131 (141)
T 2crr_A 89 GNTKARLLYEANLPEN----------------------FRRPQT---DQAVEFFIRDKYEKKKYYDKN 131 (141)
T ss_dssp HHHHHHHHGGGSCCTT----------------------CCCCCS---HHHHHHHHHHHHTSCTTCCCG
T ss_pred ccHHHHHHHHhcCCcc----------------------cCCCCc---hHHHHHHHHHHHhcCcccCCC
Confidence 9999999999999873 356764 357899999999999999753
No 6
>2olm_A Nucleoporin-like protein RIP; arfgap, GTPase-activating protein, REV-interacting protein, human immunodeficiency virus, AIDS, structural genomics; 1.48A {Homo sapiens} PDB: 2d9l_A
Probab=100.00 E-value=5.5e-38 Score=286.52 Aligned_cols=123 Identities=24% Similarity=0.502 Sum_probs=109.7
Q ss_pred cccCcccHHHHHHccCCCCccccCCCCCCCceeeccceeeeccchhhhcccCCCccceeEeecCCCCCCHHHHHHHHHhc
Q 006276 495 SCVKSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLG 574 (652)
Q Consensus 495 ~~~~~~~~~~~l~~~~~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~lg~~is~vks~~ld~~~w~~~~i~~~~~~G 574 (652)
..+++++.|+.|++.|+|+.|||||+++|+|+|+|+|||||++||||||+||+| |+||||+|| .|++++|++|+.+|
T Consensus 8 ~~e~~~~~l~~l~~~p~N~~CaDCg~~~P~WaS~n~GvfiC~~CsgiHR~LG~~-s~VrSl~ld--~w~~~~l~~m~~~G 84 (140)
T 2olm_A 8 QEEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPP-HRVKSISMT--TFTQQEIEFLQKHG 84 (140)
T ss_dssp HHHHHHHHHHHHHTSGGGGSCTTTCSSCCCEEETTTTEEECHHHHHHHTTSSSC-CCEEETTTC--CCCHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHhcCcCCCcCCCCCCCCCCceeeccCEEEchhccchhccCCCc-ceeeecCCC--CCCHHHHHHHHHhc
Confidence 345678889999999999999999999999999999999999999999999997 999999999 79999999999999
Q ss_pred hHHHHHHHHhhcccccccccCCCCCCCCCCCcchhhccCCCCCCCCHHHHHHHHHHhhcCCCCccCCC
Q 006276 575 NAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKVQYPLWPLRFN 642 (652)
Q Consensus 575 N~~~n~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~i~~kY~~~~f~~~~~ 642 (652)
|.++|.+||+++++.. ..+|.+.|. ..+++||++||++|+|+.++.
T Consensus 85 N~~an~~~e~~~~~~~---------------------~~~P~~~d~-~~~~~fIr~KYe~k~f~~~~~ 130 (140)
T 2olm_A 85 NEVCKQIWLGLFDDRS---------------------SAIPDFRDP-QKVKEFLQEKYEKKRWYVPPE 130 (140)
T ss_dssp HHHHHHHHTTTCCTTT---------------------SCCCCTTCH-HHHHHHHHHHHTSCTTCCCHH
T ss_pred cHHHHHHHHhhCCccc---------------------CCCCCCCCH-HHHHHHHHHHHcCCeeeCCcc
Confidence 9999999999998632 356665544 567789999999999998753
No 7
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=100.00 E-value=5.7e-34 Score=306.27 Aligned_cols=127 Identities=43% Similarity=0.761 Sum_probs=116.0
Q ss_pred ccccCcccHHHHHHccCCCCccccCCCCCCCceeeccceeeeccchhhhcccCCCccceeEeecCCCCCCHHHHHHHHHh
Q 006276 494 RSCVKSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSL 573 (652)
Q Consensus 494 ~~~~~~~~~~~~l~~~~~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~lg~~is~vks~~ld~~~w~~~~i~~~~~~ 573 (652)
++.+++++.++.|++.|+|+.|||||+++|+|||+|+|||+|++||||||+||+|||+||||+|| .|++++|++|+.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~n~~c~dc~~~~p~w~s~~~g~~~c~~c~~~hr~lg~~~s~v~s~~~d--~w~~~~~~~~~~~ 104 (368)
T 3jue_A 27 REPGGVGHVVAQVQSVDGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLD--SWEPELVKLMCEL 104 (368)
T ss_dssp -----CCCHHHHHHTSTTTTBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTS--CCCHHHHHHHHHS
T ss_pred hhhhHHHHHHHHHHcCCCcCcCCCCCCCCCCeEEecCCeEEcHhHHHHHhccCCCcCeeEEeecc--cccHHHHHHHHHH
Confidence 45567899999999999999999999999999999999999999999999999999999999999 7999999999999
Q ss_pred chHHHHHHHHhhcccccccccCCCCCCCCCCCcchhhccCCCCCCCCHHHHHHHHHHhhcCCCCccCCCC
Q 006276 574 GNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKVQYPLWPLRFNC 643 (652)
Q Consensus 574 GN~~~n~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~i~~kY~~~~f~~~~~~ 643 (652)
||.++|.+||+.+++.. ..||.|.++.+.||+||++||++|+|+.+++.
T Consensus 105 gn~~~n~~~e~~~~~~~---------------------~~kp~~~~~~~~re~fIr~KY~~k~f~~~l~~ 153 (368)
T 3jue_A 105 GNVIINQIYEARVEAMA---------------------VKKPGPSCSRQEKEAWIHAKYVEKKFLTKLPE 153 (368)
T ss_dssp CHHHHHHHHTTTTTTTT---------------------CCCCCTTSCHHHHHHHHHHHHTSCTTCCSCC-
T ss_pred ccHHHHHHHHhhccccc---------------------CcCCCCCCCHHHHHHHHHHHHHhhcccccchh
Confidence 99999999999998731 47999999999999999999999999998764
No 8
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.97 E-value=8.9e-33 Score=297.83 Aligned_cols=124 Identities=38% Similarity=0.685 Sum_probs=116.1
Q ss_pred ccccCcccHHHHHHccCCCCccccCCCCCCCceeeccceeeeccchhhhcccCCCccceeEeecCCCCCCHHHHHHHHHh
Q 006276 494 RSCVKSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSL 573 (652)
Q Consensus 494 ~~~~~~~~~~~~l~~~~~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~lg~~is~vks~~ld~~~w~~~~i~~~~~~ 573 (652)
+..+++++.+..|++.|+|+.|||||+++|+|||+|+|||||++||||||+| +|||+||||+|| .|++++|++|+.+
T Consensus 16 ~q~~~~~~~l~~l~~~~~N~~C~dC~~~~p~w~s~~~g~~~C~~Csg~hr~l-~his~v~s~~ld--~w~~~~~~~~~~~ 92 (386)
T 3lju_X 16 FQGKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNI-PQVSKVKSVRLD--AWEEAQVEFMASH 92 (386)
T ss_dssp HHHHHHHHHHHHHTTSGGGSBCTTTCCBSCCEEETTTTEEECHHHHHHHHTC-TTTCCEEETTTS--CCCHHHHHHHHHS
T ss_pred hhhhHHHHHHHHHhcCcCCCcCccCCCCCCCeEEecccEEEhhhhchHhhCC-Cccceeeeeccc--CCCHHHHHHHHHh
Confidence 3445688899999999999999999999999999999999999999999999 999999999999 7999999999999
Q ss_pred chHHHHHHHHhhcccccccccCCCCCCCCCCCcchhhccCCCCCCCCHHHHHHHHHHhhcCCCCccCCC
Q 006276 574 GNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKVQYPLWPLRFN 642 (652)
Q Consensus 574 GN~~~n~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~i~~kY~~~~f~~~~~ 642 (652)
||.++|++||+++|+. ..+|.++|+...||+||++||++++|+.+..
T Consensus 93 gN~~~~~~~e~~~~~~----------------------~~~p~~~~~~~~~e~fIr~KY~~~~f~~~~~ 139 (386)
T 3lju_X 93 GNDAARARFESKVPSF----------------------YYRPTPSDCQLLREQWIRAKYERQEFIYPEK 139 (386)
T ss_dssp SHHHHHHHHTTTCCTT----------------------SCCCCTTSCHHHHHHHHHHHHTSCTTTSGGG
T ss_pred cchHHHHHHhccCCcc----------------------CCCCCCccchHHHHHEHHhhhCCCEEECCcc
Confidence 9999999999999873 4799999999999999999999999998653
No 9
>2owa_A Arfgap-like finger domain containing protein; zinc finger protein, cysteine-rich motif, GTPase activation; 2.00A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=3.6e-32 Score=246.58 Aligned_cols=109 Identities=29% Similarity=0.525 Sum_probs=95.7
Q ss_pred ccHHHHHHccCCCCccccCCCCCCCceeeccceeeeccchhhhcccCCCccceeEeecCCCCCCHHHHHHHHHhchHHHH
Q 006276 500 EKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFAN 579 (652)
Q Consensus 500 ~~~~~~l~~~~~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~lg~~is~vks~~ld~~~w~~~~i~~~~~~GN~~~n 579 (652)
+++++.|++.|+|+.|||||+++|+|+|+|+|||||++||||||+||+|||+||||+|| .|++++|+.|+.+||.++|
T Consensus 24 ~~l~~~l~~~p~N~~CaDCga~~P~WaS~n~GvfiC~~CsgiHR~LG~hiS~VrSl~lD--~w~~~~l~~m~~~GN~~an 101 (138)
T 2owa_A 24 DNFFQIVRNRPENRTCFDCESRNPTWLSLSFAVFICLNCSSDHRKMGVHISFVRSSDLD--KFTPIQLVRMDIGGNGRAR 101 (138)
T ss_dssp HHHHHHHHHSGGGGBCTTTCCBSCCEEETTTTEEECHHHHHHHHTTCTTTCCEEETTTS--CCCHHHHHHHHHCCHHHHH
T ss_pred HHHHHHHHcCcCCCcCCCCcCCCCCeEEecCCEEEhHhhhHHHhCCCCCCCeeeecCcC--cCCHHHHHHHHhhccHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999 7999999999999999999
Q ss_pred HHHHhhcccccccccCCCCCCCCCCCcchhhccCCCCCCCCHHHHHHHHHHhhcCCC
Q 006276 580 SVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKVQYPL 636 (652)
Q Consensus 580 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~i~~kY~~~~ 636 (652)
++||++... .|. .+..+..+.||.++|.++.
T Consensus 102 ~~~e~~~~~-------------------------~~~-~~~~~kY~s~~a~~Y~~kL 132 (138)
T 2owa_A 102 NYFKQVLGV-------------------------NFS-PKTKEYASSICGRQYKQIL 132 (138)
T ss_dssp HHHHHHTCT-------------------------TCC-GGGCHHHHSHHHHHHHHHH
T ss_pred HHHHHHcCC-------------------------CCC-CCHHHHHhhHHHHHHHHHH
Confidence 999986432 111 1233566889999998763
No 10
>2crw_A ARF GAP 3, ADP-ribosylation factor GTPase-activating protein 3; arfgap domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.97 E-value=2.8e-31 Score=243.16 Aligned_cols=89 Identities=44% Similarity=0.696 Sum_probs=84.6
Q ss_pred cccHHHHHHccCCCCccccCCCCCCCceeeccceeeeccchhhhcccCCCccceeEeecCCCCCCHHHHHHHHHhchHHH
Q 006276 499 SEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFA 578 (652)
Q Consensus 499 ~~~~~~~l~~~~~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~lg~~is~vks~~ld~~~w~~~~i~~~~~~GN~~~ 578 (652)
.++.++.|++.|+|+.|||||+++|+|+|+|+|||||++|+||||.||+|||+||||+||+ .|++++|+.|+.+||.++
T Consensus 16 ~~~~l~~L~~~p~N~~CaDCga~~P~WaS~n~GvfiC~~CsgiHR~LG~hiS~VrSl~LD~-~W~~~~l~~m~~~GN~~a 94 (149)
T 2crw_A 16 ILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDS-NWSWFQLRCMQVGGNASA 94 (149)
T ss_dssp HHHHHHHHHHSTTTSBCSSSCCBSCCCEETTTTEECCHHHHHHHHHHCTTTCCEECSSSCC-CCCHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHhcCcCCCcCCCCcCCCCCcEEeccCEEEchhcchhhccCCCCCCeeeccccCC-CCCHHHHHHHHHHhhHHH
Confidence 4678889999999999999999999999999999999999999999999999999999993 399999999999999999
Q ss_pred HHHHHhhccc
Q 006276 579 NSVWEELLQS 588 (652)
Q Consensus 579 n~~~e~~~~~ 588 (652)
|++||+++++
T Consensus 95 n~~~e~~~~~ 104 (149)
T 2crw_A 95 SSFFHQHGCS 104 (149)
T ss_dssp HHHHHHHCCC
T ss_pred HHHHHhcCCC
Confidence 9999999865
No 11
>3dwd_A ADP-ribosylation factor GTPase-activating protein; GAP, structural genomics consorti ER-golgi transport, golgi apparatus, GTPase activation; 2.40A {Homo sapiens}
Probab=99.96 E-value=1.2e-30 Score=236.30 Aligned_cols=88 Identities=38% Similarity=0.700 Sum_probs=82.5
Q ss_pred cCcccHHHHHHccCCCCccccCCCCCCCceeeccceeeeccchhhhcccCCCccceeEeecCCCCCCHHHHHHHHHhchH
Q 006276 497 VKSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNA 576 (652)
Q Consensus 497 ~~~~~~~~~l~~~~~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~lg~~is~vks~~ld~~~w~~~~i~~~~~~GN~ 576 (652)
.++++.++.|++.|+|+.|+|||+++|+|+|+|+|||||++||||||+||+|||+||||+|| .|++++|+.|+.+||.
T Consensus 23 ~~~~~~l~~L~~~p~N~~CaDCga~~P~WaS~nlGvfiC~~CSgiHR~LG~hISkVkSl~LD--~W~~~el~~m~~~GN~ 100 (147)
T 3dwd_A 23 PRTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD--KWKDIELEKMKAGGNA 100 (147)
T ss_dssp HHHHHHHHHHHTSTTTTBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEESCC----CCHHHHHHHHHCCHH
T ss_pred HHHHHHHHHHHcCcCCCccCCCCCCCCCeEEecccEeEhHhhChHHhcCCCCCCcccccccc--CCCHHHHHHHHHHhhH
Confidence 34678899999999999999999999999999999999999999999999999999999999 7999999999999999
Q ss_pred HHHHHHHhhc
Q 006276 577 FANSVWEELL 586 (652)
Q Consensus 577 ~~n~~~e~~~ 586 (652)
++|+|||++.
T Consensus 101 ~an~~~ea~~ 110 (147)
T 3dwd_A 101 KFREFLESQE 110 (147)
T ss_dssp HHHHHHHTST
T ss_pred HHHHHHHhCC
Confidence 9999999874
No 12
>2p57_A GTPase-activating protein ZNF289; zinc finger, GAP, structural genomics, structural genomics consortium, SGC, metal binding protein; 1.80A {Homo sapiens}
Probab=99.96 E-value=9.9e-30 Score=230.63 Aligned_cols=88 Identities=43% Similarity=0.730 Sum_probs=82.5
Q ss_pred cccHHHHHHccCCCCccccCCCCCCCceeeccceeeeccchhhhcccCCCccceeEeecCCCCCCHHHHHHHHHhchHHH
Q 006276 499 SEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFA 578 (652)
Q Consensus 499 ~~~~~~~l~~~~~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~lg~~is~vks~~ld~~~w~~~~i~~~~~~GN~~~ 578 (652)
.++.++.|++.|+|+.|+|||+++|+|+|+|+|||||++||||||+||+|||+||||+||+ .|++++|+.|+.+||.++
T Consensus 24 ~~~~l~~L~~~p~N~~CaDCga~~P~WaS~n~GvfiC~~CsgiHR~LG~hIS~VrSl~LD~-~W~~~~l~~m~~~GN~~a 102 (144)
T 2p57_A 24 IQTLFKRLRAVPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDS-NWNWFQLRCMQVGGNANA 102 (144)
T ss_dssp HHHHHHHHHHSGGGGBCTTTCCBSCCEEEGGGTEEECHHHHHHHHHHCTTTCCEEESSSCC-CCCHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHhcCCCCCcCCCCcCCCCCeEEeccCEEEhhhchHHHcCCCCCCCeeeecccCC-CCCHHHHHHHHHhCHHHH
Confidence 4567788899999999999999999999999999999999999999999999999999993 399999999999999999
Q ss_pred HHHHHhhcc
Q 006276 579 NSVWEELLQ 587 (652)
Q Consensus 579 n~~~e~~~~ 587 (652)
|++||++..
T Consensus 103 n~~~e~~g~ 111 (144)
T 2p57_A 103 TAFFRQHGC 111 (144)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHcCC
Confidence 999998854
No 13
>3sub_A ADP-ribosylation factor GTPase-activating protein; protein trafficking, hydrolase AC; 2.40A {Plasmodium falciparum 3D7}
Probab=99.95 E-value=2.6e-29 Score=230.65 Aligned_cols=88 Identities=40% Similarity=0.767 Sum_probs=82.8
Q ss_pred cccHHHHHHcc-CCCCccccCCCCCCCceeeccceeeeccchhhhcccCCCccceeEeecCCCCCCHHHHHHHHHhchHH
Q 006276 499 SEKPIDVLRRV-CGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAF 577 (652)
Q Consensus 499 ~~~~~~~l~~~-~~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~lg~~is~vks~~ld~~~w~~~~i~~~~~~GN~~ 577 (652)
.++.++.|++. |+|+.|||||+++|+|||+|+|||||++||||||+||+|||+||||+|| .|++++|+.|+.+||.+
T Consensus 8 a~~~l~~L~~~~p~N~~CaDCga~~P~WaS~nlGvflCi~CSGiHR~LG~hISkVKSltLD--~Wt~e~l~~m~~~GN~~ 85 (163)
T 3sub_A 8 AVEFINRLKKEDESNNKCFDCGISNPDWVSVNHGIFLCINCSGVHRSLGVHISIVRSIKMD--IFTDEQLKYIDKGGNKK 85 (163)
T ss_dssp HHHHHHHHHHHSGGGGBCTTTCCBSCCEEETTTTEEECHHHHHHHHHTCTTTCCEEETTTC--CCCHHHHHHHHHCCHHH
T ss_pred HHHHHHHHHhCCCCCCccccCCCCCCCeEEecCCeeEHHhhhHHhcCCCCCCCeeeecccc--CcCHHHHHHHHhhCHHH
Confidence 45677888775 8999999999999999999999999999999999999999999999999 79999999999999999
Q ss_pred HHHHHHhhccc
Q 006276 578 ANSVWEELLQS 588 (652)
Q Consensus 578 ~n~~~e~~~~~ 588 (652)
+|.+||++...
T Consensus 86 an~~~e~~g~~ 96 (163)
T 3sub_A 86 CQTYLENYGIS 96 (163)
T ss_dssp HHHHHHHTTCT
T ss_pred HHHHHHHcCCc
Confidence 99999998765
No 14
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.95 E-value=1.7e-28 Score=256.80 Aligned_cols=121 Identities=41% Similarity=0.680 Sum_probs=112.4
Q ss_pred CcccHHHHHHccCCCCccccCCCCCCCceeeccceeeeccchhhhcccCCCccceeEeecCCCCCCHHHHHHHHHhchHH
Q 006276 498 KSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAF 577 (652)
Q Consensus 498 ~~~~~~~~l~~~~~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~lg~~is~vks~~ld~~~w~~~~i~~~~~~GN~~ 577 (652)
..++.++.|++.|+|+.|+|||+++|+|+|+|+|||+|++|||+||+||+|||+|||++|| .|+++++.+|..+||.+
T Consensus 28 ~~~~~~~~~~~~~~n~~c~dc~~~~p~w~s~~~g~~~c~~cs~~hr~lg~~is~v~sl~lD--~w~~~~l~~~~~~GN~~ 105 (301)
T 2b0o_E 28 LTKLLIAEVKSRPGNSQCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLD--LLGPSELLLALNMGNTS 105 (301)
T ss_dssp HHHHHHHHHHTSTTTTBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTS--CCCHHHHHHHHHCCHHH
T ss_pred HHHHHHHHHhcCCCCCcCCCCCCCCCCeEEeecCeEEcHHHHHHHHhhCCCcccccccCcC--CCCHHHHHHHHHcCCHH
Confidence 3566788999999999999999999999999999999999999999999999999999999 79999999999999999
Q ss_pred HHHHHHhhcccccccccCCCCCCCCCCCcchhhccCCCCCCCCHHHHHHHHHHhhcCCCCccCC
Q 006276 578 ANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKVQYPLWPLRF 641 (652)
Q Consensus 578 ~n~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~i~~kY~~~~f~~~~ 641 (652)
+|.+||+.+++.. ..+|.+.++...|++||++||++++|..+.
T Consensus 106 ~n~i~E~~l~~~~---------------------~~kP~~~s~~~~r~~~I~~Ky~~~~f~~~~ 148 (301)
T 2b0o_E 106 FNEVMEAQLPSHG---------------------GPKPSAESDMGTRRDYIMAKYVEHRFARRC 148 (301)
T ss_dssp HHHHHTTTCCSSS---------------------CSCCCTTCCHHHHHHHHHHHHTSCTTSCCC
T ss_pred HHHHHHHhhhhcc---------------------CCCCCCcccHHHHHHHHHHHHHhhhhhccc
Confidence 9999999998731 468988889999999999999999998763
No 15
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.95 E-value=1.7e-28 Score=253.80 Aligned_cols=123 Identities=41% Similarity=0.712 Sum_probs=114.2
Q ss_pred CcccHHHHHHccCCCCccccCCCCCCCceeeccceeeeccchhhhcccCCCccceeEeecCCCCCCHHHHHHHHHhchHH
Q 006276 498 KSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAF 577 (652)
Q Consensus 498 ~~~~~~~~l~~~~~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~lg~~is~vks~~ld~~~w~~~~i~~~~~~GN~~ 577 (652)
.+++.++.|++.|+|+.|+|||+++|+|+|+|+|+|+|++||||||+||+|||+|||++|| .|+++++..|..+||..
T Consensus 3 ~~~~~~~~~~~~~~n~~c~dc~~~~p~w~s~~~g~~~c~~c~~~hr~lg~~is~v~s~~~d--~~~~~~l~~~~~~GN~~ 80 (278)
T 1dcq_A 3 LTKEIISEVQRMTGNDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLD--VLGTSELLLAKNIGNAG 80 (278)
T ss_dssp CHHHHHHHHHHSTTTTBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTS--CCCGGGGHHHHHSCHHH
T ss_pred hHHHHHHHHHcCCCCCcCCCCCCCCCCeEEecCCeEEcHHHHHHHhhcCCCcceeeeeecC--CCCHHHHHHHHHcCcHH
Confidence 3567889999999999999999999999999999999999999999999999999999999 79999999999999999
Q ss_pred HHHHHHhhcccccccccCCCCCCCCCCCcchhhccCCCCCCCCHHHHHHHHHHhhcCCCCccCCCC
Q 006276 578 ANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKVQYPLWPLRFNC 643 (652)
Q Consensus 578 ~n~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~i~~kY~~~~f~~~~~~ 643 (652)
+|.+||+.+++.. ..+|.+.++...+++||++||+.+.|..+...
T Consensus 81 ~n~i~e~~l~~~~---------------------~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~ 125 (278)
T 1dcq_A 81 FNEIMECCLPSED---------------------PVKPNPGSDMIARKDYITAKYMERRYARKKHA 125 (278)
T ss_dssp HHHHHTTTCCSSS---------------------CCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSS
T ss_pred HHHHHHhhCChhh---------------------cCCCCCCCCHHHHHHHHHHHHHHhhccccccc
Confidence 9999999998742 35899999999999999999999999987543
No 16
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.94 E-value=2e-28 Score=273.71 Aligned_cols=121 Identities=41% Similarity=0.680 Sum_probs=113.5
Q ss_pred CcccHHHHHHccCCCCccccCCCCCCCceeeccceeeeccchhhhcccCCCccceeEeecCCCCCCHHHHHHHHHhchHH
Q 006276 498 KSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAF 577 (652)
Q Consensus 498 ~~~~~~~~l~~~~~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~lg~~is~vks~~ld~~~w~~~~i~~~~~~GN~~ 577 (652)
.+++.++.|++.|+|..|||||+++|+|+|+|+|||+|++||||||+||+|||+|||++|| .|+++++.+|+.+||..
T Consensus 9 ~~~~~~~~~~~~~~n~~c~dc~~~~p~w~s~~~~~~~c~~c~~~hr~lg~~~s~vrsl~ld--~w~~~~~~l~~~~GN~~ 86 (497)
T 3lvq_E 9 LTKLLIAEVKSRPGNSQCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLD--LLGPSELLLALNMGNTS 86 (497)
T ss_dssp HHHHHHHHHHTSTTTTBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTS--CCCGGGGTTTTTCCHHH
T ss_pred HHHHHHHHHhcCCCCCcccCCCCCCCCEEEechhHHhHHhhHHHHHhhccccceecccccC--CCCHHHHHHHHHHhhHH
Confidence 4567889999999999999999999999999999999999999999999999999999999 79999999999999999
Q ss_pred HHHHHHhhcccccccccCCCCCCCCCCCcchhhccCCCCCCCCHHHHHHHHHHhhcCCCCccCC
Q 006276 578 ANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKVQYPLWPLRF 641 (652)
Q Consensus 578 ~n~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~i~~kY~~~~f~~~~ 641 (652)
+|.+||+.+|+.. ..+|.+.+....|++||++||+++.|..+.
T Consensus 87 an~i~E~~lp~~~---------------------~~kP~~~s~~~~re~fIraky~~~~f~~~~ 129 (497)
T 3lvq_E 87 FNEVMEAQLPSHG---------------------GPKPSAESDMGTRRDYIMAKYVEHRFARRC 129 (497)
T ss_dssp HHHHHTTTCCSSS---------------------CSCCCTTCCHHHHHHHHHHHHTTCTTSCCC
T ss_pred HHHHHHhhccccc---------------------CCCCCCcCcHHHHHHHHHHHhhcccccccc
Confidence 9999999998732 468888899999999999999999998875
No 17
>3o47_A ADP-ribosylation factor GTPase-activating protein ribosylation factor 1; structural genomics consortium, GTPase activation; HET: GDP; 2.80A {Homo sapiens}
Probab=99.90 E-value=7.3e-25 Score=232.08 Aligned_cols=91 Identities=36% Similarity=0.674 Sum_probs=85.3
Q ss_pred ccCcccHHHHHHccCCCCccccCCCCCCCceeeccceeeeccchhhhcccCCCccceeEeecCCCCCCHHHHHHHHHhch
Q 006276 496 CVKSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGN 575 (652)
Q Consensus 496 ~~~~~~~~~~l~~~~~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~lg~~is~vks~~ld~~~w~~~~i~~~~~~GN 575 (652)
+.++++.++.|++.|+|+.|||||+++|+|||+|+|||+|++||||||+||+|||+||||+|| .|++++|+.|+.+||
T Consensus 21 ~~~~~~~~~~~~~~~~n~~c~dc~~~~~~~~~~~~~~~~c~~c~~~hr~~~~~~s~v~s~~~~--~~~~~~~~~~~~~gN 98 (329)
T 3o47_A 21 SPRTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD--KWKDIELEKMKAGGN 98 (329)
T ss_dssp --CHHHHHHHHHHSTTTTBCTTTCCBSCCEEEGGGTEEECHHHHHHHHHHCTTTCCEEESSSC--CCCHHHHHHHHHCCH
T ss_pred CHHHHHHHHHHHcCCCCCcCCCCCCCCCCeEEecCCEEEChhhhhhhcccCCCcCEEeecccc--CCCHHHHHHHHHhCc
Confidence 345778899999999999999999999999999999999999999999999999999999999 799999999999999
Q ss_pred HHHHHHHHhhccc
Q 006276 576 AFANSVWEELLQS 588 (652)
Q Consensus 576 ~~~n~~~e~~~~~ 588 (652)
.++|++||+....
T Consensus 99 ~~~n~~~e~~~~~ 111 (329)
T 3o47_A 99 AKFREFLESQEDY 111 (329)
T ss_dssp HHHHHHHHTCSSC
T ss_pred HHHHHHHHhcCCC
Confidence 9999999988654
No 18
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=99.82 E-value=4.5e-20 Score=168.08 Aligned_cols=119 Identities=23% Similarity=0.353 Sum_probs=77.3
Q ss_pred ceeeeEEEeccCC-CCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCcc
Q 006276 292 QTIRQGYLSKRSS-NLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 370 (652)
Q Consensus 292 ~~~k~G~L~K~~~-~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (652)
.++++|||+|+++ ..++.|+||||+|+++|+|+||++..+.... ..+..|-.... ..
T Consensus 3 ~~~k~G~L~K~~g~~~~k~WkkRwFvL~~~~~l~Y~~~~~d~~~~------------~~~~~i~l~~~----------~~ 60 (128)
T 2rlo_A 3 IPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHS------------THGKEMDLLRT----------TV 60 (128)
T ss_dssp CEEEEEEEEEECSCSTTCCEEEEEEEEETTTEEEEESSHHHHHHT------------CSCEEEESSSC----------EE
T ss_pred cceeEEEEEEecCCCccCCccEEEEEEeCCCEEEEecchhhhccc------------cCCCeeeeeee----------EE
Confidence 5789999999965 3679999999999988999999652110000 00000000000 00
Q ss_pred ccccceeecccceeeeC-----CCCCCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHHHHHhhc
Q 006276 371 SAARHTVNLLTSTIKVD-----ADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIASLLS 432 (652)
Q Consensus 371 ~~~~~~i~l~~~~vk~~-----~~~~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~ai~~~l~ 432 (652)
..+.+.|.|..|.+.+. +...+++|||.|++++ ++|+|+|+|++||++||.||+.+|..+|+
T Consensus 61 ~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~~~l~ 128 (128)
T 2rlo_A 61 KVPGKRPPRAISAFGPSASGSAGQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILASLQ 128 (128)
T ss_dssp ECSSCCCCCSSCCCSCCSCCCCSSCCCCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHHHHHC
T ss_pred ecCCCccccccccccccccccccccccCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHHHcC
Confidence 01122233333332210 1122678999999998 89999999999999999999999998774
No 19
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.80 E-value=2.6e-19 Score=159.97 Aligned_cols=97 Identities=19% Similarity=0.346 Sum_probs=77.6
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEe----cCCCCCCCCCCCcccccCcccccccccccccccccCCCCC
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYR----KQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVH 367 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 367 (652)
...++|||+|+++...+.|+||||||++ ..||||+ ++.+
T Consensus 7 n~~~~G~L~KqG~~~~K~WKrRwFVL~~-~~LyYfk~~~~~~~~------------------------------------ 49 (126)
T 1wi1_A 7 GMKHSGYLWAIGKNVWKRWKKRFFVLVQ-VSQYTFAMCSYREKK------------------------------------ 49 (126)
T ss_dssp CEEEEEEEEEECSSSCCSCEEEEEEEEE-EETTEEEEEECCSSS------------------------------------
T ss_pred CCceeEEEEEeCCCcccccceEEEEEeC-CEEEEEEcccccccC------------------------------------
Confidence 3689999999977667999999999994 5777776 4332
Q ss_pred Cccccccceeecccceeee---CCCCCCCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 368 DEKSAARHTVNLLTSTIKV---DADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 368 ~~~~~~~~~i~l~~~~vk~---~~~~~~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
..+.+.|.|..++|.. .++...++|+|+|++++++|+|+|+|++||++||.||..|+.
T Consensus 50 ---~~p~G~I~L~g~tV~~~~~~~~~~~~k~~F~~v~~~~ty~~~Adseee~~~WikAi~~A~~ 110 (126)
T 1wi1_A 50 ---AEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATG 110 (126)
T ss_dssp ---SCCSEEEECSSCEEEECCCCSSCCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred ---CCCceEEECCCcEEEEecCCcccccCceEEEEecCCceEEEEcCCHHHHHHHHHHHHHHhc
Confidence 1234667777777763 233456889999999999999999999999999999999975
No 20
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=8e-19 Score=156.43 Aligned_cols=102 Identities=27% Similarity=0.471 Sum_probs=83.2
Q ss_pred CCceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCc
Q 006276 290 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 369 (652)
Q Consensus 290 ~~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 369 (652)
...++++|||+|++...++.|+||||+|+ ++.|+||+++...
T Consensus 7 ~~~~~~~G~L~K~~~~~~k~WkkR~fvL~-~~~L~yyk~~~~~------------------------------------- 48 (114)
T 2da0_A 7 GYGSEKKGYLLKKSDGIRKVWQRRKCSVK-NGILTISHATSNR------------------------------------- 48 (114)
T ss_dssp CCCSCEEEEEEEECSSSCCCEEEEEEEEE-TTEEEECCSSCCS-------------------------------------
T ss_pred CCCccEEEEEEEeCCCCCCCceeEEEEEe-CCEEEEEcCCCCC-------------------------------------
Confidence 34678999999997655589999999997 7788888765321
Q ss_pred cccccceeecccceeeeCCCCCCCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHHHHHhhccCC
Q 006276 370 KSAARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQA 435 (652)
Q Consensus 370 ~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~ai~~~l~~~~ 435 (652)
+.+.+.++.|.+.+. .+++|||+|+++.++|+|+|+|++|+++||.+|+.+|..+++..-
T Consensus 49 ---~~~~i~l~~~~v~~~---~~~~~~F~I~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~~~ 108 (114)
T 2da0_A 49 ---QPAKLNLLTCQVKPN---AEDKKSFDLISHNRTYHFQAEDEQDYVAWISVLTNSKEEALTMAF 108 (114)
T ss_dssp ---CCEEEETTTSEEEEC---SSSSSCEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred ---CCCEEEeeeeEEEEC---CCCCCEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 224466777777643 346899999999999999999999999999999999999987643
No 21
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=99.76 E-value=2.6e-18 Score=147.46 Aligned_cols=93 Identities=25% Similarity=0.366 Sum_probs=73.5
Q ss_pred eeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCcccc
Q 006276 293 TIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKSA 372 (652)
Q Consensus 293 ~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 372 (652)
+.|+|||+|++ +..++|+||||+|+ ++.|+||+++.+. ...
T Consensus 1 V~k~G~L~K~g-~~~k~WkkR~FvL~-~~~L~Yy~~~~~~-------------------------------------~~~ 41 (94)
T 2rsg_A 1 VERCGVLSKWT-NYIHGWQDRWVVLK-NNALSYYKSEDET-------------------------------------EYG 41 (94)
T ss_dssp CCEEEEEEEES-SSTTCEEEEEEEEE-TTEEEEESSTTGG-------------------------------------GTC
T ss_pred CCEEEEEEEeC-CCCCCceEEEEEEE-CCEEEEEEecccc-------------------------------------ccc
Confidence 46899999995 56689999999998 6778888765431 112
Q ss_pred ccceeecccceeeeCCCCCCCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHHH
Q 006276 373 ARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVI 427 (652)
Q Consensus 373 ~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~ai 427 (652)
+.+.+++..|.+... ...++||+|.+++++|+|+|+|++|+++||.||+.|.
T Consensus 42 ~~~~i~l~~~~~~~~---~~~~~~F~i~~~~r~~~l~A~s~~e~~~Wi~aLq~Ak 93 (94)
T 2rsg_A 42 CRGSICLSKAVITPH---DFDECRFDISVNDSVWYLRAQDPDHRQQWIDAIEQHK 93 (94)
T ss_dssp CSEEEETTTCEEEEC---SSCSSEEEEEETTEEEEEECCSSCCTHHHHHHHHHHC
T ss_pred ceeeEecceeeeecC---cccceeEEEEeCCeEEEEECCCHHHHHHHHHHHHhhc
Confidence 345677777776543 2457999999999999999999999999999999873
No 22
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=5.9e-18 Score=152.16 Aligned_cols=103 Identities=24% Similarity=0.464 Sum_probs=82.0
Q ss_pred CCceeeeEEEeccCCCCCCCceeEEEEEec-CceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCC
Q 006276 290 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDS-RGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHD 368 (652)
Q Consensus 290 ~~~~~k~G~L~K~~~~~~~~WkrR~f~L~~-~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 368 (652)
...+.++|||+|+++ ..+.|+||||||++ ++.|+||+++...
T Consensus 5 ~~~~~~~G~L~K~~~-~~~~Wk~R~fvL~~~~~~L~Yyk~~~~~------------------------------------ 47 (120)
T 2d9x_A 5 SSGENVYGYLMKYTN-LVTGWQYRFFVLNNEAGLLEYFVNEQSR------------------------------------ 47 (120)
T ss_dssp CSCCCCEEEEEEEEE-TTTEEEEEEEEECTTTCEEEEESSGGGS------------------------------------
T ss_pred CCCCcEEEEEEecCC-CCCCceEEEEEEECCCCEEEEEecCccc------------------------------------
Confidence 446789999999964 55899999999986 6899999876431
Q ss_pred ccccccceeecccceeeeCCCCCCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHHHHHhhcc
Q 006276 369 EKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIASLLSS 433 (652)
Q Consensus 369 ~~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~ai~~~l~~ 433 (652)
...+.+.|+|..+.|... ..+++||+|++++ ++|+|+|+|++|+++||.+|+.+|......
T Consensus 48 -~~~~~g~I~L~~~~v~~~---~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~ 109 (120)
T 2d9x_A 48 -NQKPRGTLQLAGAVISPS---DEDSHTFTVNAASGEQYKLRATDAKERQHWVSRLQICTQHHTEA 109 (120)
T ss_dssp -SSCCSEEEECTTCCEECC---SSSSSCEEECCSSSCCEEECCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCccceEEcceEEEEec---CCCCCEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHHhhhh
Confidence 112346778877777642 2457999999997 999999999999999999999999866554
No 23
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=1.8e-17 Score=148.88 Aligned_cols=102 Identities=24% Similarity=0.379 Sum_probs=81.9
Q ss_pred CceeeeEEEeccCC-CCCCCceeEEEEEecCc-eEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCC
Q 006276 291 VQTIRQGYLSKRSS-NLRGDWKRRFFVLDSRG-MLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHD 368 (652)
Q Consensus 291 ~~~~k~G~L~K~~~-~~~~~WkrR~f~L~~~g-~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 368 (652)
..+.++|||.|+++ +..+.|+||||||++++ .|+||+++.+
T Consensus 6 ~~~~~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~~------------------------------------- 48 (119)
T 2dhk_A 6 SGKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQD------------------------------------- 48 (119)
T ss_dssp SCCCCEEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTTC-------------------------------------
T ss_pred CCCcEEEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCCC-------------------------------------
Confidence 45789999999975 35689999999999654 8999977643
Q ss_pred ccccccceeecccceeeeCCCCCCCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHHHHHhhcc
Q 006276 369 EKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSS 433 (652)
Q Consensus 369 ~~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~ai~~~l~~ 433 (652)
..+.+.|+|..+++... ...+++||.|.++.|+|+|+|+|++|+++||.+|+.++....+.
T Consensus 49 --~~~~g~I~L~~~~~~~~--~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~ 109 (119)
T 2dhk_A 49 --ANPLDSIDLSSAVFDCK--ADAEEGIFEIKTPSRVITLKAATKQAMLYWLQQLQMKRWEFHNS 109 (119)
T ss_dssp --CSCSEEEEGGGCEEEEC--TTGGGCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHHHHHHS
T ss_pred --cccccEEECCCCEEEec--CCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHHhcCC
Confidence 12346677777766543 23457999999999999999999999999999999999877765
No 24
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.74 E-value=1.3e-17 Score=152.24 Aligned_cols=95 Identities=22% Similarity=0.377 Sum_probs=74.7
Q ss_pred CceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCcc
Q 006276 291 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 370 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (652)
..++++|||.|++ ..+.|+||||||+ ++.|+||+++..
T Consensus 6 ~~v~k~GwL~K~g--~~k~WkrRWfVLk-~~~L~yyk~~~~--------------------------------------- 43 (130)
T 1v88_A 6 SGIVMADWLKIRG--TLKSWTKLWCVLK-PGVLLIYKTQKN--------------------------------------- 43 (130)
T ss_dssp SSCCEEEEEEECC--SSSSCEEEEEEEE-TTEEEEESCSSS---------------------------------------
T ss_pred CceEEEeEEEEeC--CCCCceEEEEEEE-CCEEEEECCCCC---------------------------------------
Confidence 4578999999985 5589999999998 678888877643
Q ss_pred ccccceeecccceeeeCCCCCCCcccEEEEeCC------------------------eeEEEEeCCHHHHHHHHHHHHHH
Q 006276 371 SAARHTVNLLTSTIKVDADQSDLRFCFRIISPT------------------------KNYTLQAESALDQMDWIEKITGV 426 (652)
Q Consensus 371 ~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~------------------------r~~~lqA~se~e~~~Wi~ai~~a 426 (652)
..+.+.|.|..|.|.. .....++|||+|.+|. ++|+|+|+|++|+++||.||+.+
T Consensus 44 ~~p~G~I~L~~~~v~~-~~~~~~~~~F~i~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a 122 (130)
T 1v88_A 44 GQWVGTVLLNACEIIE-RPSKKDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELA 122 (130)
T ss_dssp CCCCEEEECSSCEECC-CCTTTSSCEEEEECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCEEEE-CCCCCCCeEEEEEcCCccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHH
Confidence 1234667787787753 2333456999999864 34899999999999999999999
Q ss_pred HH
Q 006276 427 IA 428 (652)
Q Consensus 427 i~ 428 (652)
|.
T Consensus 123 ~~ 124 (130)
T 1v88_A 123 LK 124 (130)
T ss_dssp HT
T ss_pred Hh
Confidence 75
No 25
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.73 E-value=2.5e-17 Score=153.57 Aligned_cols=96 Identities=16% Similarity=0.254 Sum_probs=72.5
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 371 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (652)
+++|+|||+|+++. .+.|+||||+|++ ..|+||+++.+.
T Consensus 17 pv~keG~L~Kkg~~-~k~WkrRWFvLk~-~~L~Yyk~~~d~--------------------------------------- 55 (149)
T 1x1f_A 17 PLYFEGFLLIKRSG-YREYEHYWTELRG-TTLFFYTDKKSI--------------------------------------- 55 (149)
T ss_dssp CEEEEEEEEEECTT-CCSCEEEEEEEET-TEEEEESCSSCS---------------------------------------
T ss_pred CccEEEEEEEeCCC-CCCceeEEEEEcC-CEEEEEeCCCcc---------------------------------------
Confidence 48999999999754 4899999999995 567777766431
Q ss_pred cccceeecccceeee-CCCCCCCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 372 AARHTVNLLTSTIKV-DADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 372 ~~~~~i~l~~~~vk~-~~~~~~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
.+.+.|+|..+++.. ......+++||+|++++++|+|+|+|++||++||.||+.++.
T Consensus 56 ~~~g~I~L~~~~~~~~~~~~~~~~~~F~I~t~~r~~~f~A~s~ee~~eWi~aI~~v~~ 113 (149)
T 1x1f_A 56 IYVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPKEEVQLKTENTESGEEWRGFILTVTE 113 (149)
T ss_dssp SCSEECCCSSCCEEEECCCTTSCCCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ccCcEEECCCceEEeeccCCCCcCcEEEEEcCCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 112345555544331 112234579999999999999999999999999999998876
No 26
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.72 E-value=4.5e-17 Score=143.59 Aligned_cols=96 Identities=23% Similarity=0.404 Sum_probs=76.0
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 371 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (652)
.++++|||+|+++ ..+.|+||||+|+ ++.|+||+++...
T Consensus 7 ~~~~~G~L~K~~~-~~~~Wk~RwfvL~-~~~L~yyk~~~~~--------------------------------------- 45 (109)
T 1wgq_A 7 GSTMSGYLYRSKG-SKKPWKHLWFVIK-NKVLYTYAASEDV--------------------------------------- 45 (109)
T ss_dssp SCSCEEEEEEESS-TTSCCEEEEEEEE-TTEEEEESCTTCS---------------------------------------
T ss_pred CCeEEEEEEeCCC-CCCCceeEEEEEe-CCEEEEECCCCcC---------------------------------------
Confidence 5688999999954 4589999999999 6888888766431
Q ss_pred cccceeecccceeeeCCCCCCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 372 AARHTVNLLTSTIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 372 ~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
.+.+.|+|..+.+....+...++|||+|++++ ++|+|+|+|++|+++||.+|+.++.
T Consensus 46 ~~~~~i~L~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a~~ 103 (109)
T 1wgq_A 46 AALESQPLLGFTVTLVKDENSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEGTV 103 (109)
T ss_dssp SCSEEEECSSEEEEECCCSSCSSSEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHHS
T ss_pred ccCceEECCCCEEEECCCCCCCCcEEEEEeCCCeEEEEECCCHHHHHHHHHHHHHHhc
Confidence 23356777777766544444567999999886 6799999999999999999999853
No 27
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.72 E-value=6.3e-17 Score=143.51 Aligned_cols=101 Identities=25% Similarity=0.433 Sum_probs=78.1
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 371 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (652)
.++++|||.|+++ ..+.|+||||+|. ++.|+||+++.. .
T Consensus 4 ~~~~~G~L~K~g~-~~~~Wk~R~fvL~-~~~L~yy~~~~~---------------------------------------~ 42 (113)
T 1pls_A 4 KRIREGYLVKKGS-VFNTWKPMWVVLL-EDGIEFYKKKSD---------------------------------------N 42 (113)
T ss_dssp CCSEEEEEEEESS-SSSCCEEEEEEEE-TTEEEEESSTTC---------------------------------------S
T ss_pred CCcEEEEEEEeCC-CCCCceEEEEEEE-CCEEEEEeCCCC---------------------------------------C
Confidence 4689999999954 5589999999999 566788876532 1
Q ss_pred cccceeecccceeee-CCCCCCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHHHHHhhcc
Q 006276 372 AARHTVNLLTSTIKV-DADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIASLLSS 433 (652)
Q Consensus 372 ~~~~~i~l~~~~vk~-~~~~~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~ai~~~l~~ 433 (652)
.+.+.|+|..+.+.. ..+...++|||+|++++ ++|+|+|+|++|+++||.+|+.+|......
T Consensus 43 ~~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~~~ 106 (113)
T 1pls_A 43 SPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQAAFLEERDAWVRDINKAIKCIEGL 106 (113)
T ss_dssp SCSEEEESSSCCEESSCCSSCCSSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcceEEEcCCCEEEEecCCCCCCccEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHhccchh
Confidence 234556776666542 23445678999999987 899999999999999999999999866443
No 28
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=99.72 E-value=3.9e-17 Score=148.93 Aligned_cols=111 Identities=22% Similarity=0.361 Sum_probs=79.6
Q ss_pred CceeeeEEEecc----CC-CCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCC
Q 006276 291 VQTIRQGYLSKR----SS-NLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGG 365 (652)
Q Consensus 291 ~~~~k~G~L~K~----~~-~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 365 (652)
..+.|+|||.|+ ++ ..++.|++|||+|+ ++.|+||+++.....+..
T Consensus 10 ~~~~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~-~~~L~yykd~~~~~~~~~---------------------------- 60 (129)
T 2p0d_A 10 HEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLT-GNSLVFYREPPPTAPSSG---------------------------- 60 (129)
T ss_dssp CSEEEEEEEEEEEEEETTEECCCCCEEEEEEEE-SSEEEEESCC------------------------------------
T ss_pred cceeEEEEEEEeeeccCCCcCCCCceEEEEEEe-CCEEEEEcCccccccccc----------------------------
Confidence 367899999985 23 34589999999999 566777776642110000
Q ss_pred CCCccccccceeecccceeeeCCCCCCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHHHHHh
Q 006276 366 VHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIASL 430 (652)
Q Consensus 366 ~~~~~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~ai~~~ 430 (652)
.......+.+.|+|..|.+....+...++|||+|.+++ ++|+|||+|++||++||.+|+.+|...
T Consensus 61 ~~~~~~~p~g~I~L~~~~v~~~~~~~kr~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~~ 126 (129)
T 2p0d_A 61 WGPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERL 126 (129)
T ss_dssp ------CCSEEEECTTCEEEECTTSCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCccEEEeCCcEEEECCCCCCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 00012244577888888887655556778999999986 679999999999999999999999864
No 29
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.72 E-value=1.7e-17 Score=150.50 Aligned_cols=101 Identities=25% Similarity=0.482 Sum_probs=73.1
Q ss_pred eeeeEEEeccCCCCCCCceeEEEEEec--CceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCcc
Q 006276 293 TIRQGYLSKRSSNLRGDWKRRFFVLDS--RGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 370 (652)
Q Consensus 293 ~~k~G~L~K~~~~~~~~WkrR~f~L~~--~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (652)
..++|||.|+++...+.|+||||||+. +.+||||+++.+... .
T Consensus 15 ~~~~G~L~K~g~~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~-----------------------------------~ 59 (126)
T 1v5p_A 15 NRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAV-----------------------------------G 59 (126)
T ss_dssp CCEECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTTSCT-----------------------------------T
T ss_pred CceEEEEEEeCCCCCCCccceEEEEecCCCCEEEEECCCCCCCC-----------------------------------C
Confidence 357999999975567999999999983 567888877532100 0
Q ss_pred ccccceeeccc-ceeeeCC--CCCCCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 371 SAARHTVNLLT-STIKVDA--DQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 371 ~~~~~~i~l~~-~~vk~~~--~~~~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
..+.+.|.|.. +.|.... ...+++|||.|.++.|+|+|+|+|++||++||.+|+.++.
T Consensus 60 ~~~~G~I~L~~~~~V~~~~~~~~~~~~~~F~i~t~~r~y~l~A~s~~e~~~Wi~al~~a~~ 120 (126)
T 1v5p_A 60 AGAVGSLQLTYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDLKDWVEALNQASK 120 (126)
T ss_dssp CCCSEEEETTTCCEEEECCTTTSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHTTT
T ss_pred ceeeEEEECCCccEEecCCcccCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHh
Confidence 12334555544 3343321 2345679999999999999999999999999999998753
No 30
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=5.7e-17 Score=143.97 Aligned_cols=102 Identities=23% Similarity=0.438 Sum_probs=78.8
Q ss_pred CceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCcc
Q 006276 291 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 370 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (652)
..++++|||.|+++ ..+.|+||||+|. ++.|+||+++...
T Consensus 6 ~~~~~~G~L~K~~~-~~~~Wk~R~fvL~-~~~L~yy~~~~~~-------------------------------------- 45 (115)
T 2dn6_A 6 SGVLKQGYMMKKGH-RRKNWTERWFVLK-PNIISYYVSEDLK-------------------------------------- 45 (115)
T ss_dssp CSCSEEEEEEEECT-TSSCEEEEEEEEC-SSCEEEESSTTCS--------------------------------------
T ss_pred CCceEEEEEEecCC-CCCCcEEeEEEEE-CCEEEEeCCCCCc--------------------------------------
Confidence 46789999999965 5589999999999 5677788765321
Q ss_pred ccccceeeccc-ceeeeCCCCCCCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHHHHHhhcc
Q 006276 371 SAARHTVNLLT-STIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSS 433 (652)
Q Consensus 371 ~~~~~~i~l~~-~~vk~~~~~~~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~ai~~~l~~ 433 (652)
.+.+.|.|.. +.|...++...+++||.|.+++++|+|+|+|++|+++||.+|+.+|...-..
T Consensus 46 -~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~~~ 108 (115)
T 2dn6_A 46 -DKKGDILLDENCCVESLPDKDGKKCLFLVKCFDKTFEISASDKKKKQEWIQAIHSTIHLLKLG 108 (115)
T ss_dssp -SEEEEECCCTTCEEEEECCCTTCCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHHHHHS
T ss_pred -ccCcEEEecCcEEEEECCCCCCCeeEEEEEeCCCEEEEEcCCHHHHHHHHHHHHHHHHHHhcC
Confidence 2234566654 3454444445678999999999999999999999999999999999866544
No 31
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=99.72 E-value=4.2e-17 Score=144.92 Aligned_cols=96 Identities=23% Similarity=0.443 Sum_probs=72.0
Q ss_pred eeeEEEeccCCC---CCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCcc
Q 006276 294 IRQGYLSKRSSN---LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 370 (652)
Q Consensus 294 ~k~G~L~K~~~~---~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (652)
.|+|||.|+.++ ..+.|++|||+|+ ++.|+||+++...
T Consensus 1 tkeG~L~kK~g~~~~~~k~Wk~rwfvL~-~~~L~~yk~~~~~-------------------------------------- 41 (112)
T 3cxb_B 1 TKEGMLHYKAGTSYLGKEHWKTCFVVLS-NGILYQYPDRTDV-------------------------------------- 41 (112)
T ss_dssp CEEEEEEECCSCCCSSCCCCEEEEEEEE-TTEEEEESSSSCC--------------------------------------
T ss_pred CceEEEEEeCCCCCCCCCCceEEEEEEE-CCEEEEECCCCCC--------------------------------------
Confidence 379999977543 5689999999998 6788888776431
Q ss_pred ccccceeecccceee--eCCCCCCCcccEEEEeC-CeeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006276 371 SAARHTVNLLTSTIK--VDADQSDLRFCFRIISP-TKNYTLQAESALDQMDWIEKITGVIAS 429 (652)
Q Consensus 371 ~~~~~~i~l~~~~vk--~~~~~~~rrfcF~I~t~-~r~~~lqA~se~e~~~Wi~ai~~ai~~ 429 (652)
.+.+.|+|..+.+. ...+...|+|||+|+++ .++|+|||+|++||++||.+|+.+|..
T Consensus 42 -~p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~~~~~y~f~A~s~ee~~~Wi~ai~~~~~~ 102 (112)
T 3cxb_B 42 -IPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDRPCLELSAESEAEMAEWMQHLCQAVSK 102 (112)
T ss_dssp -SCSEEEETTC-CEEEEEECCCSSCTTEEEEEETTSCCEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred -CccceEEecCCEEEeeeccCCCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHhhc
Confidence 12244556544322 23456678999999976 579999999999999999999998764
No 32
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.72 E-value=5.9e-17 Score=147.88 Aligned_cols=107 Identities=19% Similarity=0.283 Sum_probs=71.7
Q ss_pred CCceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCc
Q 006276 290 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 369 (652)
Q Consensus 290 ~~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 369 (652)
...++++|||+|+++ ..+.|+||||||..++.|+||+++.... +.|.+.-.
T Consensus 5 ~~~v~~~G~L~K~g~-~~k~WkkRwFVL~~~~~L~Yyk~~~~~~----------------------------~~g~i~l~ 55 (130)
T 2d9v_A 5 SSGLVRGGWLWRQSS-ILRRWKRNWFALWLDGTLGYYHDETAQD----------------------------EEDRVVIH 55 (130)
T ss_dssp CCCEEEEEEEEEECS-SSCCEEEEEEEEETTTEEEEESSSSTTS----------------------------EEEEEECT
T ss_pred CCceeEEEEEEeecC-ccCCceeeEEEEccCCEEEEEeCCCCCC----------------------------cCceEecc
Confidence 446899999999954 5589999999995578999998765310 00000000
Q ss_pred cccccceeecc-cc-eeeeCCCCCCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 370 KSAARHTVNLL-TS-TIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 370 ~~~~~~~i~l~-~~-~vk~~~~~~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
.....|.+. .| .+. .++...++|||+|++++ ++|+|+|+|++|+++||.||+.++.
T Consensus 56 --~~~~~i~~~~~~~~v~-~~~~~~~~~~F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~ 114 (130)
T 2d9v_A 56 --FNVRDIKVGQECQDVQ-PPEGRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALMEANS 114 (130)
T ss_dssp --TTEEEEEEGGGCSSCC-CCSSCCTTTEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred --cceeEEeccccccccC-CCCCCCcCcEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 000000100 01 121 12345678999999965 8999999999999999999999975
No 33
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.71 E-value=4.4e-17 Score=144.47 Aligned_cols=95 Identities=17% Similarity=0.245 Sum_probs=76.3
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecC--ceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSR--GMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 369 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~--g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 369 (652)
..++.|||+|+.+ .+.|+||||||+++ ..||||+++.+.
T Consensus 7 ~~~~~G~L~k~~~--~~~WkkrWfVL~~~~~~~Ly~Yk~~~d~------------------------------------- 47 (112)
T 2coc_A 7 GSLLCGPLRLSES--GETWSEVWAAIPMSDPQVLHLQGGSQDG------------------------------------- 47 (112)
T ss_dssp SSSSEEEEEEESS--SSCEEEEEEECCTTCTTCEEEECCTTCS-------------------------------------
T ss_pred CceEEEEEEecCC--CCCceEEEEEEECCCccEEEEECCCCcc-------------------------------------
Confidence 3467799999743 58999999999965 489989876431
Q ss_pred cccccceeecccceeee--CCCCCCCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHHH
Q 006276 370 KSAARHTVNLLTSTIKV--DADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVI 427 (652)
Q Consensus 370 ~~~~~~~i~l~~~~vk~--~~~~~~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~ai 427 (652)
.+.+.|.|..|.|.. ..+..+++|||+|+++.++|+|+|+|++++++||.+|+.|+
T Consensus 48 --~p~g~I~L~g~~V~~~~~~~~~~~~~~Fki~~~~~~y~f~A~s~e~~~~Wl~al~~A~ 105 (112)
T 2coc_A 48 --RLPRTIPLPSCKLSVPDPEERLDSGHVWKLQWAKQSWYLSASSAELQQQWLETLSTAA 105 (112)
T ss_dssp --SSCSEECGGGCEEECCCSSSCCSSSEEEEEEETTEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred --CcceEEEcCCCEEEecCcccccCCCCEEEEecCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 234667788888874 23445688999999999999999999999999999999875
No 34
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.71 E-value=2.9e-17 Score=148.25 Aligned_cols=105 Identities=23% Similarity=0.391 Sum_probs=78.7
Q ss_pred CceeeeEEEeccCCC-------CCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccC
Q 006276 291 VQTIRQGYLSKRSSN-------LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYH 363 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~-------~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (652)
..+.++|||.|+... ..+.|++|||||+ ++.|+||+++.....+
T Consensus 6 ~~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~-~~~L~yyk~~~~~~~~---------------------------- 56 (123)
T 1wjm_A 6 SGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLR-RGSLGFYKDAKAASAG---------------------------- 56 (123)
T ss_dssp CCCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEE-TTEEEEESSHHHHTTT----------------------------
T ss_pred CCeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEE-CCEEEEEEcccccccC----------------------------
Confidence 457899999998532 2589999999999 5677888765431100
Q ss_pred CCCCCccccccceeecccceeeeCCCCCCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006276 364 GGVHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIAS 429 (652)
Q Consensus 364 g~~~~~~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~ai~~ 429 (652)
....+...|++..|.+.+..+...++|||+|++++ ++|+|||+|++||++||.+|+.+|..
T Consensus 57 -----~~~~~~~~i~l~~~~~~~~~~~~~r~~~F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~~ 118 (123)
T 1wjm_A 57 -----VPYHGEVPVSLARAQGSVAFDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIAS 118 (123)
T ss_dssp -----CBSSSCCCEECTTCEEEECTTCSSCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred -----cccCCCceEEccCcEEeecccccCCCCEEEEEEcCCcEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 00112234677767776655556789999999987 89999999999999999999999873
No 35
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=99.71 E-value=5.7e-17 Score=146.71 Aligned_cols=99 Identities=23% Similarity=0.481 Sum_probs=78.4
Q ss_pred CceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCcc
Q 006276 291 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 370 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (652)
..++++|||.|+++ ..+.|+||||+|+ ++.|+||+++..
T Consensus 16 ~~~~~~G~L~K~g~-~~~~Wk~R~fvL~-~~~L~yy~~~~~--------------------------------------- 54 (126)
T 1fao_A 16 SLGTKEGYLTKQGG-LVKTWKTRWFTLH-RNELKYFKDQMS--------------------------------------- 54 (126)
T ss_dssp CTTCEEEEEEEECS-SSCCEEEEEEEEE-TTEEEEESSTTC---------------------------------------
T ss_pred CCccEEEEEEEcCC-CCCCcccEEEEEE-CCEEEEeCCCCC---------------------------------------
Confidence 35789999999964 5689999999999 567888876532
Q ss_pred ccccceeecccceeeeCCCCCCCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHHHHHh
Q 006276 371 SAARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASL 430 (652)
Q Consensus 371 ~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~ai~~~ 430 (652)
..+.+.|+|..|.+....+..+++|||+|.+++++|+|+|+|++|+++||.+|+.+|..+
T Consensus 55 ~~~~g~i~L~~~~~v~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~ 114 (126)
T 1fao_A 55 PEPIRILDLTECSAVQFDYSQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKLSQI 114 (126)
T ss_dssp SSCSEEEEGGGCCEEEEECSSSSSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred CCceeEEEccceEEEEecccCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 123456777777632223445678999999999999999999999999999999999873
No 36
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.71 E-value=1.9e-17 Score=145.65 Aligned_cols=95 Identities=19% Similarity=0.372 Sum_probs=74.3
Q ss_pred CceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCcc
Q 006276 291 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 370 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (652)
..+.++|||.|+ ..+.|+||||+|+ ++.|+||+++.. .
T Consensus 6 ~~~~~~G~L~K~---~~k~Wk~RwfvL~-~~~L~yyk~~~~--------------------------------------~ 43 (107)
T 2cof_A 6 SGLETSSYLNVL---VNSQWKSRWCSVR-DNHLHFYQDRNR--------------------------------------S 43 (107)
T ss_dssp CCCTTCCEEEEE---ETTEEEEEEEEEC-SSCEEEECSSTT--------------------------------------C
T ss_pred CCCcEeEEEEEe---cCCCcceEEEEEE-CCEEEEEeCCcc--------------------------------------c
Confidence 356889999999 4589999999998 557788876532 1
Q ss_pred ccccceeecccceeeeCCCCCCCcccEEEEeC-CeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 371 SAARHTVNLLTSTIKVDADQSDLRFCFRIISP-TKNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 371 ~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~-~r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
..+.+.|.+..|.|.+.. +..++|||+|.++ .++|+|+|+|++|+++||.+|+.++.
T Consensus 44 ~~~~~~i~l~~~~v~~~~-~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~~~~ 101 (107)
T 2cof_A 44 KVAQQPLSLVGCEVVPDP-SPDHLYSFRILHKGEELAKLEAKSSEEMGHWLGLLLSESG 101 (107)
T ss_dssp SEEEEEECTTTCEEECCC-BTTBSCEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHSS
T ss_pred CCCeeEEeccceEEEECC-CCCCCeEEEEEeCCCeEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 123355677777676543 3567899999999 68999999999999999999998743
No 37
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=99.71 E-value=1e-16 Score=144.20 Aligned_cols=97 Identities=28% Similarity=0.484 Sum_probs=77.7
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 371 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (652)
.++++|||+|+++...+.|+||||+|+ ++.|+||+++...
T Consensus 10 ~~~~~G~L~K~~~~~~~~WkkR~fvL~-~~~L~yy~~~~~~--------------------------------------- 49 (123)
T 1upq_A 10 PVHIRGWLHKQDSSGLRLWKRRWFVLS-GHCLFYYKDSREE--------------------------------------- 49 (123)
T ss_dssp CEEEEEEEEEECSSSSCCEEEEEEEEE-TTEEEEESSTTCC---------------------------------------
T ss_pred CceEEEEEEeeCCCCCCCceeEEEEEe-CCEEEEECCCCCc---------------------------------------
Confidence 578999999997556689999999998 7888888765431
Q ss_pred cccceeecccceeeeCCC--CCCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 372 AARHTVNLLTSTIKVDAD--QSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 372 ~~~~~i~l~~~~vk~~~~--~~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
.+.+.|.|..+.|..... ...++|||.|.+++ ++|+|+|+|++|+++||.+|+.++.
T Consensus 50 ~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 109 (123)
T 1upq_A 50 SVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRASR 109 (123)
T ss_dssp SCCEEEEGGGCEEEECCSSCTTSSSSEEEEECTTSCCEEEECSSHHHHHHHHHHHHHHHC
T ss_pred ccceEEECCCCEEEECCCCccCCCcEEEEEECCCCeEEEEECCCHHHHHHHHHHHHHHHh
Confidence 234556776777665432 23578999999987 9999999999999999999999985
No 38
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.70 E-value=1.5e-16 Score=141.61 Aligned_cols=96 Identities=17% Similarity=0.389 Sum_probs=74.4
Q ss_pred CCceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCc
Q 006276 290 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 369 (652)
Q Consensus 290 ~~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 369 (652)
...++++|||.|+++...+.|+||||+|+ ++.|+||+++...
T Consensus 5 ~~~~~~~G~L~K~~~~~~~~WkkR~fvL~-~~~L~yy~~~~~~------------------------------------- 46 (115)
T 2cod_A 5 SSGKVKSGWLDKLSPQGKRMFQKRWVKFD-GLSISYYNNEKEM------------------------------------- 46 (115)
T ss_dssp CSCCCEEEEEEECCSSSSSCCEEEEEEEC-SSEEEEEESSCCS-------------------------------------
T ss_pred CCCccEEEEEEEcCCCCCCCCceEEEEEE-CCEEEEEcCCCCc-------------------------------------
Confidence 34678999999997646689999999998 6778888776431
Q ss_pred cccccceeecccce-eeeCCCCCCCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHHHHHh
Q 006276 370 KSAARHTVNLLTST-IKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASL 430 (652)
Q Consensus 370 ~~~~~~~i~l~~~~-vk~~~~~~~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~ai~~~ 430 (652)
.+.+.|.|..+. |.. . + ++||.|++++++|+|+|+|++|+++||.+|+.++...
T Consensus 47 --~~~g~i~l~~~~~v~~--~--~-~~~F~i~~~~r~~~l~a~s~~e~~~Wi~~l~~~~~~~ 101 (115)
T 2cod_A 47 --YSKGIIPLSAISTVRV--Q--G-DNKFEVVTTQRTFVFRVEKEEERNDWISILLNALKSQ 101 (115)
T ss_dssp --SCCCEEETTTEEEEEE--E--T-TTEEEEEESSCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred --ccCCEEECCcceEEEe--C--C-CCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHhC
Confidence 123455665543 332 1 1 6999999999999999999999999999999998543
No 39
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=99.70 E-value=6.7e-17 Score=141.54 Aligned_cols=99 Identities=28% Similarity=0.664 Sum_probs=77.7
Q ss_pred ceeeeEEEeccCCC---CCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCC
Q 006276 292 QTIRQGYLSKRSSN---LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHD 368 (652)
Q Consensus 292 ~~~k~G~L~K~~~~---~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 368 (652)
.++++|||.|+++. ..+.|+||||+|+ ++.|+||+++..
T Consensus 2 ~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~-~~~L~yy~~~~~------------------------------------- 43 (108)
T 1u5d_A 2 SVIKQGYLEKKSKDHSFFGSEWQKRWCVVS-RGLFYYYANEKS------------------------------------- 43 (108)
T ss_dssp CEEEEEEEEEEEECSSSSCEEEEEEEEEEE-TTEEEEESSTTC-------------------------------------
T ss_pred CccEEEEEEEcCCCCCccccCceeeEEEEe-CCEEEEecCCCC-------------------------------------
Confidence 47899999999743 2389999999998 677888876542
Q ss_pred ccccccceeecccceeeeCC---CCCCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHHHHHh
Q 006276 369 EKSAARHTVNLLTSTIKVDA---DQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIASL 430 (652)
Q Consensus 369 ~~~~~~~~i~l~~~~vk~~~---~~~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~ai~~~ 430 (652)
..+.+.|+|..+.+...+ ....++|||.|++++ ++|+|+|+|++|+++||.+|+.+|..+
T Consensus 44 --~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~i~~l 107 (108)
T 1u5d_A 44 --KQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQISFLLKDL 107 (108)
T ss_dssp --SSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred --CCCCEEEEecceEEEeCCccccccCCcceEEEEcCCCcEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 123456677777765432 334567999999998 999999999999999999999999754
No 40
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=99.70 E-value=1.1e-16 Score=145.03 Aligned_cols=99 Identities=22% Similarity=0.474 Sum_probs=77.7
Q ss_pred CCceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCc
Q 006276 290 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 369 (652)
Q Consensus 290 ~~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 369 (652)
...++++|||+|+++...+.|+||||+|+ ++.|+||+++...
T Consensus 18 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~-~~~L~yy~~~~~~------------------------------------- 59 (128)
T 2dkp_A 18 NAPVVRRGWLYKQDSTGMKLWKKRWFVLS-DLCLFYYRDEKEE------------------------------------- 59 (128)
T ss_dssp TSCCCEEEEEEEECCSSSCCEEEEEEEEE-TTEEEEESSTTCC-------------------------------------
T ss_pred CCCcEEEEEEEEeCCCCCCCceeEEEEEe-CCEEEEECCCCCc-------------------------------------
Confidence 34678999999997656689999999998 6788888765431
Q ss_pred cccccceeecccceeeeCC--CCCCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 370 KSAARHTVNLLTSTIKVDA--DQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 370 ~~~~~~~i~l~~~~vk~~~--~~~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
.+.+.|+|..+.+.... +...++|||+|++++ ++|+|+|+|++|+++||.+|+.++.
T Consensus 60 --~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 119 (128)
T 2dkp_A 60 --GILGSILLPSFQIALLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAAL 119 (128)
T ss_dssp --SEEEEECGGGSEEEECCGGGCCSSCSEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHS
T ss_pred --ccceEEEcCceEEEEcCCcccCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 23455667666665432 223678999999986 9999999999999999999998864
No 41
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=99.69 E-value=1.7e-16 Score=139.56 Aligned_cols=97 Identities=27% Similarity=0.422 Sum_probs=74.1
Q ss_pred CceeeeEEEeccCCCCCCCceeEEEEEecC-ceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCc
Q 006276 291 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSR-GMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 369 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~-g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 369 (652)
..++++|||+|+++ ..+.|++|||+|.++ +.|+||+++..
T Consensus 5 ~~~~~~G~L~K~g~-~~~~Wk~R~fvL~~~~~~L~yyk~~~~-------------------------------------- 45 (109)
T 2i5f_A 5 GVIIKQGCLLKQGH-RRKNWKVRKFILREDPAYLHYYDPAGA-------------------------------------- 45 (109)
T ss_dssp CCEEEEEEEEEECT-TTCCEEEEEEEEETTTTEEEEECTTSC--------------------------------------
T ss_pred CceeEEEEEEEcCC-CCCCceEEEEEEeCCCcEEEEECCCCC--------------------------------------
Confidence 35789999999964 458899999999975 48999976532
Q ss_pred cccccceeecccceeeeCCCC-----CCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHHH
Q 006276 370 KSAARHTVNLLTSTIKVDADQ-----SDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVI 427 (652)
Q Consensus 370 ~~~~~~~i~l~~~~vk~~~~~-----~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~ai 427 (652)
..+.+.|+|..|.+....+. .+++|||+|.+++ ++|+|+|+|++|+++||.+|+.+|
T Consensus 46 -~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 46 -EDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp -SSCSEEEECTTCEEEEECC--------CCSEEEEECTTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred -CCccEEEECCCCEEEEccCCcccccCCCceEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 12345677776665432221 1378999999997 669999999999999999999986
No 42
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.69 E-value=2e-16 Score=140.88 Aligned_cols=97 Identities=30% Similarity=0.558 Sum_probs=75.6
Q ss_pred CceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCcc
Q 006276 291 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 370 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (652)
..++++|||+|+++ ..+.|+||||+|+ ++.|+||+++..
T Consensus 6 ~~~~~~G~L~K~g~-~~~~Wk~R~fvL~-~~~L~yy~~~~~--------------------------------------- 44 (118)
T 1v89_A 6 SGPIKMGWLKKQRS-IVKNWQQRYFVLR-AQQLYYYKDEED--------------------------------------- 44 (118)
T ss_dssp SCEEEEEEEEEECS-SSSCEEEEEEEEE-TTEEEEESSSSC---------------------------------------
T ss_pred CCCcEEEEEEecCC-CCCCccEEEEEEE-CCEEEEEeCCCC---------------------------------------
Confidence 46789999999954 5588999999999 567888876543
Q ss_pred ccccceeecccceeeeCC--CCCCCcccEEEEe--------CCeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 371 SAARHTVNLLTSTIKVDA--DQSDLRFCFRIIS--------PTKNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 371 ~~~~~~i~l~~~~vk~~~--~~~~rrfcF~I~t--------~~r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
..+.+.|+|..|.+.... ....++|||+|++ +.++|+|+|+|++|+++||.+|+.+|.
T Consensus 45 ~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 112 (118)
T 1v89_A 45 TKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAG 112 (118)
T ss_dssp CSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCceEEEECCCCEEEEcCcCcccCCcceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence 123455667666654322 2345689999998 678999999999999999999999986
No 43
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.69 E-value=1.3e-16 Score=142.07 Aligned_cols=98 Identities=20% Similarity=0.432 Sum_probs=73.7
Q ss_pred CceeeeEEEeccCCCCCCCceeEEEEEec-CceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCc
Q 006276 291 VQTIRQGYLSKRSSNLRGDWKRRFFVLDS-RGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 369 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~~~~~WkrR~f~L~~-~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 369 (652)
..++++|||+|+++. .+.|+||||+|+. ++.|+||+++...
T Consensus 6 ~~~~~~G~L~K~g~~-~~~Wk~R~fvL~~~~~~L~yy~~~~~~------------------------------------- 47 (117)
T 1v5u_A 6 SGRSYEGILYKKGAF-MKPWKARWFVLDKTKHQLRYYDHRMDT------------------------------------- 47 (117)
T ss_dssp CSSSEEEEEEECCCS-SSCCEEEEEEEETTTTEEEEESSSSCS-------------------------------------
T ss_pred CCccEEEEEEecCCC-CCCceeeEEEEECCCCEEEEeecCCCC-------------------------------------
Confidence 457899999999654 5899999999986 5788888766431
Q ss_pred cccccceeecccceeeeC-------CCCCCCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 370 KSAARHTVNLLTSTIKVD-------ADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 370 ~~~~~~~i~l~~~~vk~~-------~~~~~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
.+.+.|+|..+.+... ++...++|||+|.++.++|+|+|+|++|+++||.+|+.+|.
T Consensus 48 --~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~ 111 (117)
T 1v5u_A 48 --ECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQSCLS 111 (117)
T ss_dssp --SCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEESSCEEEEECSSHHHHHHHHHHHHTTCC
T ss_pred --ccceEEEccCcEEEeecCccccccccCCCCeEEEEECCCceEEEECCCHHHHHHHHHHHHHHhc
Confidence 1234455554443221 12245679999999999999999999999999999988753
No 44
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=99.69 E-value=7.2e-17 Score=140.66 Aligned_cols=94 Identities=27% Similarity=0.494 Sum_probs=74.0
Q ss_pred eeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCcccccc
Q 006276 295 RQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKSAAR 374 (652)
Q Consensus 295 k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 374 (652)
++|||+|+++ ..+.|++|||+|+ ++.|+||+++.+. ...+.
T Consensus 1 ~eG~L~K~g~-~~k~Wk~R~fvL~-~~~L~Yy~~~~~~-------------------------------------~~~~~ 41 (103)
T 3rcp_A 1 MEGVLYKWTN-YLTGWQPRWFVLD-NGILSYYDSQDDV-------------------------------------CKGSK 41 (103)
T ss_dssp CEEEEEEECC-TTTCEEEEEEEEE-TTEEEEESSCC----------------------------------------CCCS
T ss_pred CceEEEEccC-CCCCeeceEEEEE-CCEEEEEecCCcc-------------------------------------cCCcc
Confidence 4899999964 4589999999999 7889999876431 01234
Q ss_pred ceeecccceeeeCCCCCCCcccEEEEeC-CeeEEEEeCCHHHHHHHHHHHHHHHHHh
Q 006276 375 HTVNLLTSTIKVDADQSDLRFCFRIISP-TKNYTLQAESALDQMDWIEKITGVIASL 430 (652)
Q Consensus 375 ~~i~l~~~~vk~~~~~~~rrfcF~I~t~-~r~~~lqA~se~e~~~Wi~ai~~ai~~~ 430 (652)
+.|+|..|.+.+.+ +..++|.|+++ .++|+|+|+|++|+++||.+|+.|++.+
T Consensus 42 g~i~L~~~~v~~~~---~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~~ 95 (103)
T 3rcp_A 42 GSIKMAVCEIKVHS---ADNTRMELIIPGEQHFYMKAVNAAERQRWLVALGSSKASL 95 (103)
T ss_dssp CEEEGGGCEEECCT---TCSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHTTSCCC
T ss_pred cEEEeeeeEEEEcC---CCCceEEEEeCCCCEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 66778778776532 24789999998 6999999999999999999999987644
No 45
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=99.69 E-value=1.5e-16 Score=144.57 Aligned_cols=100 Identities=26% Similarity=0.398 Sum_probs=77.4
Q ss_pred CceeeeEEEeccCCCCCCCceeEEEEEecC-ceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCc
Q 006276 291 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSR-GMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 369 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~-g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 369 (652)
..++++|||+|+++ ..+.|+||||+|+++ +.|+||+++..
T Consensus 16 ~~~~~~G~L~K~g~-~~~~Wk~R~fvL~~~~~~L~yy~~~~~-------------------------------------- 56 (129)
T 1x05_A 16 GVIIKQGCLLKQGH-RRKNWKVRKFILREDPAYLHYYDPAGA-------------------------------------- 56 (129)
T ss_dssp SEEEEEEEEEECCS-SCCCCEEEEEEEEETTTEEEEECSSCC--------------------------------------
T ss_pred CCceEEEEEEecCC-CCCCCeeEEEEEeCCCCEEEEECCCCC--------------------------------------
Confidence 46899999999954 558899999999976 48999976532
Q ss_pred cccccceeecccceeeeCCCC-----CCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHHHHHh
Q 006276 370 KSAARHTVNLLTSTIKVDADQ-----SDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIASL 430 (652)
Q Consensus 370 ~~~~~~~i~l~~~~vk~~~~~-----~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~ai~~~ 430 (652)
..+.+.|+|..|.+....+. .+++|||+|++++ ++|+|+|+|++|+++||.+|+.++...
T Consensus 57 -~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~ 122 (129)
T 1x05_A 57 -EDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMASRTG 122 (129)
T ss_dssp -SSCSEEEECTTCEEEECCCCCCSSSCSSCSEEEEECTTCCCCEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred -CcceeEEEccCCEEEEccCCccccccCCCeEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHcc
Confidence 12345677777766533222 1378999999986 679999999999999999999998643
No 46
>2z0v_A SH3-containing GRB2-like protein 3; helix bundle, alternative splicing, coiled coil, SH3 domain, endocytosis, structural genomics, NPPSFA; 2.49A {Homo sapiens}
Probab=99.68 E-value=2.6e-15 Score=151.41 Aligned_cols=191 Identities=17% Similarity=0.270 Sum_probs=158.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------hh------ccc---------chHHHHHHHHHHhhCCCCCCCccc
Q 006276 15 QIQGLEESAEVLRERSLKFYKGCRKYTEG-------LG------EGY---------DGDIAFASALETFGGGHNDPISVA 72 (652)
Q Consensus 15 sv~~~E~~le~l~~~l~kl~K~~kk~~~~-------~~------~~~---------~~~~~f~~~L~~f~~~~~d~~~~~ 72 (652)
-+..+|.+++.+++|++++++.++.|.+. +. +++ .....|+.++...+..+.++..+
T Consensus 16 d~~~lE~r~d~~~~~~~~l~k~~~~yl~pn~~~r~~~~~~~~i~k~~~~~k~~~~~~~~~~L~~~m~~~~~~l~~ds~~- 94 (240)
T 2z0v_A 16 EFLDMERKIDVTNKVVAEILSKTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTF- 94 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHTCCCCCCSSCCCCCCSSCCHHHHHHHHHHHHHHHHCTTCHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhHHHHHHHHHHHHhccccCCCCCCcHHHHHHHHHHHHhhcCCCchH-
Confidence 36788999999999999999999988552 11 111 11245777775555433333332
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCChhhHh
Q 006276 73 FGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQYVNIDLHEVKEARKCFDKASLLYDQAREKFLSLRKGTKTDVAA 152 (652)
Q Consensus 73 ~~g~~L~~f~~~lkel~~~~~~l~~~~~~~i~~pL~~f~~~di~~~ke~Rk~Fek~~~~YD~al~ky~s~~K~k~~~~~~ 152 (652)
|.+|.+||.++++|...+..+..++...+++||.+|++.+|+.+.+.||++++.+.+||++..|+.+
T Consensus 95 --g~aL~~~g~a~~~ia~~~~~~~~~v~~~~l~pL~~~l~~d~k~i~~~rKkle~~rLd~D~ak~k~~k----------- 161 (240)
T 2z0v_A 95 --GNALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKKKRVGK----------- 161 (240)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTTTTS-----------
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------
Confidence 6799999999999999999999999999999999999999999999999999999999999888633
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 006276 153 ILEEELHSARSAFEQARFSLVTALSNVEAKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVL 220 (652)
Q Consensus 153 E~~~eL~~~Rk~f~~aslDyv~~l~~l~~~k~~e~le~l~~~~~aq~~ff~~g~e~~~~l~~~l~el~ 220 (652)
..+.+|..++..|..+.-+++..|..+... ++++++.|..|+.+|..||++|++.+.++.+++....
T Consensus 162 ~~eeEl~~A~~~fe~~~e~~~~~m~~~~~~-~~e~l~~l~~~v~aQl~y~~~~~e~L~~l~~~l~~~~ 228 (240)
T 2z0v_A 162 IPDEEVRQAVEKFEESKELAERSMFNFLEN-DVEQVSQLAVFIEAALDYHRQSTEILQELQSKLQMRI 228 (240)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHS-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 125678888999999999999999999876 5899999999999999999999999999988876543
No 47
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=99.68 E-value=1.5e-16 Score=140.88 Aligned_cols=105 Identities=23% Similarity=0.386 Sum_probs=72.3
Q ss_pred CceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCcc
Q 006276 291 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 370 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (652)
..++++|||.|+++ ..+.|+||||+|+.++.|+||+++.... +.| ..
T Consensus 3 ~~~~~~G~L~K~g~-~~k~WkkR~fvL~~~~~L~yyk~~~~~~----------------------------~~g----~i 49 (112)
T 3aj4_A 3 MAFVKSGWLLRQST-ILKRWKKNWFDLWSDGHLIYYDDQTRQN----------------------------IED----KV 49 (112)
T ss_dssp CSCSEEEEEEEECS-SSCCEEEEEEEECTTSEEEEESSTTCCS----------------------------EEE----EE
T ss_pred cceeEEEEEEeeCC-CCCCeeceEEEEeeCCEEEEEcCCCCCC----------------------------CCc----cc
Confidence 35789999999965 5589999999995588999998765310 000 00
Q ss_pred ccccceeecccce-eee--CCCCCCCcccEEEEeC-CeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 371 SAARHTVNLLTST-IKV--DADQSDLRFCFRIISP-TKNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 371 ~~~~~~i~l~~~~-vk~--~~~~~~rrfcF~I~t~-~r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
......|++..+. +.. .++...++|||.|+++ .++|+|+|+|++|+++||.+|+.|+.
T Consensus 50 ~l~~~~i~l~~~~~v~~v~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 111 (112)
T 3aj4_A 50 HMPMDCINIRTGQECRDTQPPDGKSKDCMLQIVCRDGKTISLCAESTDDCLAWKFTLQDSRT 111 (112)
T ss_dssp EHHHHEEEEEEGGGCCSCCCSTTCCGGGEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred cccccceeecccccccccCCCCCCCcCcEEEEEecCCcEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 1122334443221 211 1233344799999987 69999999999999999999998863
No 48
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=3.1e-16 Score=140.79 Aligned_cols=98 Identities=23% Similarity=0.465 Sum_probs=76.2
Q ss_pred CceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCcc
Q 006276 291 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 370 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (652)
..++++|||+|+++...+.|+||||+|. ++.|+||+++...
T Consensus 20 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~-~~~L~yy~~~~~~-------------------------------------- 60 (122)
T 2yry_A 20 APVTKAGWLFKQASSGVKQWNKRWFVLV-DRCLFYYKDEKEE-------------------------------------- 60 (122)
T ss_dssp CCEEEEEEEEEECCSSSCCEEEEEEEEE-TTEEEEESSTTCC--------------------------------------
T ss_pred CCccEEEEEEEECCCCCCCcEEEEEEEe-CCEEEEECCCCCC--------------------------------------
Confidence 4578999999997556689999999998 6788888765431
Q ss_pred ccccceeecccceeeeC--CCCCCCcccEEEEeC-CeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 371 SAARHTVNLLTSTIKVD--ADQSDLRFCFRIISP-TKNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 371 ~~~~~~i~l~~~~vk~~--~~~~~rrfcF~I~t~-~r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
.+.+.|+|..+.|... .+...++|||+|+++ .++|+|+|+|++|+++||.+|+.++.
T Consensus 61 -~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 120 (122)
T 2yry_A 61 -SILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAAR 120 (122)
T ss_dssp -SCCEEEESTTCCCEECCTTCSCSSSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred -CcccEEEcCCCEEEEcCccccCCcccEEEEecCCCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 2335566666655432 233467899999866 59999999999999999999999863
No 49
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=2.5e-16 Score=140.28 Aligned_cols=98 Identities=23% Similarity=0.465 Sum_probs=76.0
Q ss_pred CceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCcc
Q 006276 291 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 370 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (652)
..++++|||+|+++...+.|+||||+|+ ++.|+||+++...
T Consensus 9 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~-~~~L~yy~~~~~~-------------------------------------- 49 (117)
T 2d9y_A 9 APVTKAGWLFKQASSGVKQWNKRWFVLV-DRCLFYYKDEKEE-------------------------------------- 49 (117)
T ss_dssp CCCCEEEEEEEECTTSSSCEEEEEEEEE-TTEEEEESSTTCC--------------------------------------
T ss_pred CCeeEEEEEEEeCCCCCCCceEEEEEEC-CCEEEEECCCCCC--------------------------------------
Confidence 4578999999997556689999999998 6788888765431
Q ss_pred ccccceeecccceeeeC--CCCCCCcccEEEEeC-CeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 371 SAARHTVNLLTSTIKVD--ADQSDLRFCFRIISP-TKNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 371 ~~~~~~i~l~~~~vk~~--~~~~~rrfcF~I~t~-~r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
.+.+.|+|..+++... .+...++|||+|+++ .++|+|+|+|++|+++||.+|+.++.
T Consensus 50 -~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 109 (117)
T 2d9y_A 50 -SILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAAR 109 (117)
T ss_dssp -SCCEEEECSSCEEEECCTTTTCCCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHTTC
T ss_pred -CcCCEEEeCCeEEEEcCccccCCCccEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 2345667766665432 133567899999865 59999999999999999999988853
No 50
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=99.68 E-value=2.5e-16 Score=142.30 Aligned_cols=96 Identities=26% Similarity=0.518 Sum_probs=76.2
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 371 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (652)
.++++|||.|+++ ..+.|+||||+|+ ++.|+||+++.. .
T Consensus 4 ~~~~~G~L~K~g~-~~~~Wk~R~fvL~-~~~L~yy~~~~~---------------------------------------~ 42 (127)
T 1fgy_A 4 NPDREGWLLKLGG-RVKTWKRRWFILT-DNCLYYFEYTTD---------------------------------------K 42 (127)
T ss_dssp SCSEEEEEEEECS-SSCCEEEEEEEEE-TTEEEEESSTTC---------------------------------------S
T ss_pred CCceEeEEEEECC-CCCCeEEEEEEEE-CCEEEEeCCCCC---------------------------------------C
Confidence 4689999999964 4589999999999 677888876532 1
Q ss_pred cccceeecccceeeeCCCCCCCcccEEEEeCC----------------------eeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006276 372 AARHTVNLLTSTIKVDADQSDLRFCFRIISPT----------------------KNYTLQAESALDQMDWIEKITGVIAS 429 (652)
Q Consensus 372 ~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~----------------------r~~~lqA~se~e~~~Wi~ai~~ai~~ 429 (652)
.+.+.|+|..+.+... +...+++||+|.+++ ++|+|+|+|++|+++||.+|+.+|..
T Consensus 43 ~~~g~i~L~~~~v~~~-~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 121 (127)
T 1fgy_A 43 EPRGIIPLENLSIREV-LDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISR 121 (127)
T ss_dssp SCSEEEECTTCEEEEE-CCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CcceEEECCceEEEEc-cCCCCCceEEEecCCccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhcc
Confidence 2345677777776643 345778999999874 68999999999999999999999863
No 51
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=99.68 E-value=7.9e-17 Score=145.62 Aligned_cols=105 Identities=19% Similarity=0.364 Sum_probs=73.2
Q ss_pred CceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCcc
Q 006276 291 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 370 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (652)
..++++|||.|+++ ..+.|+||||+|++++.|+||+++.... +.|.
T Consensus 6 ~~~~~~G~L~K~g~-~~k~WkkRwfvL~~~~~L~yy~~~~~~~----------------------------~~g~----- 51 (125)
T 1unq_A 6 VAIVKEGWLHKRGE-YIKTWRPRYFLLKNDGTFIGYKERPQDV----------------------------DQRE----- 51 (125)
T ss_dssp GCEEEEEEEEEECS-SSCCEEEEEEEEETTSEEEEESSCCCSH----------------------------HHHT-----
T ss_pred CCeeEEeeEEeccC-CccCccCcEEEEecCCEEEEEeCCCCCC----------------------------CCce-----
Confidence 35789999999965 5689999999999778888887654310 0000
Q ss_pred ccccceeecccceeeeCCCCCCCcccEEEEe----CCeeEEEEeCCHHHHHHHHHHHHHHHHHhhc
Q 006276 371 SAARHTVNLLTSTIKVDADQSDLRFCFRIIS----PTKNYTLQAESALDQMDWIEKITGVIASLLS 432 (652)
Q Consensus 371 ~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t----~~r~~~lqA~se~e~~~Wi~ai~~ai~~~l~ 432 (652)
.+...+.+..|.+.. ....++|||+|.+ +.++|+|+|+|++|+++||.+|+.++...-.
T Consensus 52 -i~L~~~~~~~~~~~~--~~~~~~~~F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~ 114 (125)
T 1unq_A 52 -APLNNFSVAQCQLMK--TERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLKK 114 (125)
T ss_dssp -SCSEEEECTTCEEEE--ECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred -eEccceeEEeeeecc--cccCCCCEEEEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHHhhccc
Confidence 011112222222221 2235789999996 4589999999999999999999999976543
No 52
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.67 E-value=2.1e-16 Score=147.51 Aligned_cols=104 Identities=23% Similarity=0.385 Sum_probs=80.0
Q ss_pred CCceeeeEEEeccCC-----CCCCCceeEEEEEecC--c--eEEEEecCCCCCCCCCCCcccccCccccccccccccccc
Q 006276 290 KVQTIRQGYLSKRSS-----NLRGDWKRRFFVLDSR--G--MLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSS 360 (652)
Q Consensus 290 ~~~~~k~G~L~K~~~-----~~~~~WkrR~f~L~~~--g--~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (652)
...++++|||+|++. ...+.|+||||||+++ | .|+||+++..
T Consensus 15 ~~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~----------------------------- 65 (150)
T 1wg7_A 15 KGGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKI----------------------------- 65 (150)
T ss_dssp SCCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCC-----------------------------
T ss_pred CCCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCC-----------------------------
Confidence 346789999999964 2457999999999964 2 7888876531
Q ss_pred ccCCCCCCccccccceeecccceeeeCCCCCCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHHHHHhhc
Q 006276 361 HYHGGVHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIASLLS 432 (652)
Q Consensus 361 ~~~g~~~~~~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~ai~~~l~ 432 (652)
...+.+.|+|..|.+... ....++|||+|++++ ++|+|+|+|++|+++||.+|+.+|.....
T Consensus 66 ---------~~~~~g~I~L~~~~~~~~-~~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~~~~~ 128 (150)
T 1wg7_A 66 ---------SKEPKGSIFLDSCMGVVQ-NNKVRRFAFELKMQDKSSYLLAADSEVEMEEWITILNKILQLNFE 128 (150)
T ss_dssp ---------SSCCSEEECTTTCCEECC-CCSSCTTEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------CCCcCcEEecccCEEEec-CCCCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHHhhhH
Confidence 112345677777776643 345678999999996 89999999999999999999999975543
No 53
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=99.67 E-value=3.1e-16 Score=140.84 Aligned_cols=99 Identities=17% Similarity=0.357 Sum_probs=75.8
Q ss_pred CCceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCc
Q 006276 290 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 369 (652)
Q Consensus 290 ~~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 369 (652)
.+ ++++|||.|++. ..+.|++|||||+++ .|+||+++... .
T Consensus 4 ~~-~~k~G~L~Kk~~-~~k~W~~rwfVL~~~-~L~yyK~~~~~------------------------------------~ 44 (120)
T 4a6h_A 4 FT-EIKSGFLERRSK-FLKSYSKGYYVLTPN-FLHEFKTADRK------------------------------------K 44 (120)
T ss_dssp CC-CSEEEEEEEEET-TTTEEEEEEEEECSS-EEEEESSCCTT------------------------------------T
T ss_pred Cc-ccEEEEEEEcCC-CCCCCccEEEEEeCC-EEEEEcCCCcC------------------------------------c
Confidence 44 789999999965 568999999999966 77788765321 0
Q ss_pred cccccceeecccceeeeCCCCCC--------CcccEEEEeCC-------eeEEEEeCCHHHHHHHHHHHHHHH
Q 006276 370 KSAARHTVNLLTSTIKVDADQSD--------LRFCFRIISPT-------KNYTLQAESALDQMDWIEKITGVI 427 (652)
Q Consensus 370 ~~~~~~~i~l~~~~vk~~~~~~~--------rrfcF~I~t~~-------r~~~lqA~se~e~~~Wi~ai~~ai 427 (652)
...+.+.|.|..|.|....+... +.++|.|..++ ++|+|+|+|.+||++||.+|+.++
T Consensus 45 d~~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 45 DLVPVMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp CCSCSEEEEGGGEEEEEECCCCC---------CCEEEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred CCCceEEEECCCCEEEEcccccccccccccCCCcEEEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 12345678888888876443322 67899999865 489999999999999999999874
No 54
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.66 E-value=2e-16 Score=143.59 Aligned_cols=99 Identities=28% Similarity=0.480 Sum_probs=74.6
Q ss_pred CceeeeEEEeccCCCCCCCceeEEEEEecC-ceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCc
Q 006276 291 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSR-GMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 369 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~-g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 369 (652)
..++++|||.|++. ..+.|+||||+|+++ +.|+||+++..
T Consensus 16 ~~~~~~G~L~K~g~-~~~~Wk~R~fvL~~d~~~L~yy~~~~~-------------------------------------- 56 (129)
T 1x1g_A 16 GTVVKQGYLAKQGH-KRKNWKVRRFVLRKDPAFLHYYDPSKE-------------------------------------- 56 (129)
T ss_dssp SEEEEEEEEEEECS-SSSSEEEEEEEEEESSCEEEEECSSSC--------------------------------------
T ss_pred CCEEEEEEEEEECC-CCCCeeeEEEEEeCCCCeEEEeCCCCc--------------------------------------
Confidence 36799999999954 468999999999964 78999977521
Q ss_pred cccccceeecccceeeeCCCC--------CCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 370 KSAARHTVNLLTSTIKVDADQ--------SDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 370 ~~~~~~~i~l~~~~vk~~~~~--------~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
...+.+.|+|..|.+....+. ..++|||+|++++ ++|+|+|+|++|+++||.+|+.+|.
T Consensus 57 ~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 124 (129)
T 1x1g_A 57 ENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKLTS 124 (129)
T ss_dssp CSSCSCCEESTTCCCEECCSSSSCSSCSSCCCSSCEEECCTTCCCEEECCSSHHHHHHHHHHHHHHSS
T ss_pred CCccceEEECcCCEEEEeCCCCCcccccCCCCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 012234566666655432221 0168999999997 6799999999999999999999975
No 55
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=99.66 E-value=2.4e-16 Score=137.80 Aligned_cols=98 Identities=19% Similarity=0.407 Sum_probs=72.9
Q ss_pred eeEEEeccCC-------CCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCC
Q 006276 295 RQGYLSKRSS-------NLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVH 367 (652)
Q Consensus 295 k~G~L~K~~~-------~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 367 (652)
++|||.|++. ...+.|++|||||+ ++.|+||+++.....+
T Consensus 1 ~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~-~~~L~yyk~~~~~~~~-------------------------------- 47 (106)
T 1btn_A 1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVIN-NQEMGFYKDAKSAASG-------------------------------- 47 (106)
T ss_dssp CEEEEEEEEEECSTTCBCSCCCCEEEEEEEE-TTEEEEESSHHHHHHT--------------------------------
T ss_pred CccEEEEEEEEeCCCccCCCCChhEEEEEEE-CCEEEEEeCCcccccC--------------------------------
Confidence 4899999961 35589999999998 6788888765421000
Q ss_pred CccccccceeecccceeeeCCCCCCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHH
Q 006276 368 DEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGV 426 (652)
Q Consensus 368 ~~~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~a 426 (652)
....+...|++..|.+.+..+...++|||+|++++ ++|+|+|+|++|+++||.+|+.|
T Consensus 48 -~~~~~~~~i~l~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 48 -IPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp -CCSSSCCCEECTTCEEEECSSCCSSSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred -CCCCCcceEECCCCEEEEcccccCCccEEEEEecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 00112345677777766655666789999999886 99999999999999999999864
No 56
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=99.66 E-value=5.2e-16 Score=153.39 Aligned_cols=99 Identities=23% Similarity=0.568 Sum_probs=77.9
Q ss_pred CceeeeEEEeccCCC---CCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCC
Q 006276 291 VQTIRQGYLSKRSSN---LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVH 367 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~---~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 367 (652)
..++++|||+|+++. .++.|+||||||+ ++.|+||+++...
T Consensus 104 ~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~-~~~L~Yyk~~~~~----------------------------------- 147 (211)
T 1u5e_A 104 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALS-KTVFYYYGSDKDK----------------------------------- 147 (211)
T ss_dssp SSEEEEEEEEEEEHHHHTTTCCCEEEEEEEE-TTEEEEESSTTCS-----------------------------------
T ss_pred CCccEEEEEEEECCCCCcCCCCcEeEEEEEE-CCEEEEEcCCCCc-----------------------------------
Confidence 458999999999753 4689999999998 6788888776431
Q ss_pred CccccccceeecccceeeeCC---CCCCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006276 368 DEKSAARHTVNLLTSTIKVDA---DQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIAS 429 (652)
Q Consensus 368 ~~~~~~~~~i~l~~~~vk~~~---~~~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~ai~~ 429 (652)
.+.+.|.|..+++...+ ....++|||.|++++ ++|+|+|+|++|+++||.+|+.+|..
T Consensus 148 ----~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~aL~~ai~~ 209 (211)
T 1u5e_A 148 ----QQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQD 209 (211)
T ss_dssp ----SCSEEEECTTCEEEECGGGCSSTTGGGEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred ----cceEEEEeCCcEEEEcCCccccCCCCCEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 23456677666665432 233567999999996 99999999999999999999999874
No 57
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=99.66 E-value=4.9e-16 Score=147.59 Aligned_cols=100 Identities=22% Similarity=0.377 Sum_probs=71.7
Q ss_pred CceeeeEEEeccCCCC----CCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCC
Q 006276 291 VQTIRQGYLSKRSSNL----RGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGV 366 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~~----~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 366 (652)
..+++||||+||+.+. .++|+||||||+ ++.|+||+++...
T Consensus 13 ~~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~-~~~L~Yyk~~~~~---------------------------------- 57 (164)
T 2lul_A 13 FNTILEEILIKRSQQKKKTSPLNYKERLFVLT-KSMLTYYEGRAEK---------------------------------- 57 (164)
T ss_dssp SSEEEEEEEEEECCCCSSSCCCCEEEEEEEEE-SSEEEEECCCSSS----------------------------------
T ss_pred CCeeEEEEEEEecCCCCCCCCCCceeEEEEEE-CCEEEEEeccCcc----------------------------------
Confidence 3589999999997542 357999999998 5677788765431
Q ss_pred CCccccccceeecccce-eeeCC-----CCCCCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006276 367 HDEKSAARHTVNLLTST-IKVDA-----DQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIAS 429 (652)
Q Consensus 367 ~~~~~~~~~~i~l~~~~-vk~~~-----~~~~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~ai~~ 429 (652)
..+.+.|+|..+. |.... ....+.+||.|++++++|+|+|+|++|+++||.||+.+|..
T Consensus 58 ----~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f~i~t~~rt~~l~A~s~~e~~~Wi~aL~~~i~~ 122 (164)
T 2lul_A 58 ----KYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQVVHDANTLYIFAPSPQSRDLWVKKLKEEIKN 122 (164)
T ss_dssp ----CCCCCEEEGGGCCEEEECCCCSSSCCSSSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTT
T ss_pred ----cccccEEEEeeeEEEEeccccccCcccccceeEEEecCCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 0112334443322 21111 12346799999999999999999999999999999999863
No 58
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=99.66 E-value=3.7e-16 Score=145.69 Aligned_cols=100 Identities=23% Similarity=0.564 Sum_probs=77.2
Q ss_pred CceeeeEEEeccCCC---CCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCC
Q 006276 291 VQTIRQGYLSKRSSN---LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVH 367 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~---~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 367 (652)
..++++|||+|+++. ..+.|+||||+|+ ++.|+||+++..
T Consensus 15 ~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~-~~~L~yyk~~~~------------------------------------ 57 (148)
T 1u5f_A 15 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALS-KTVFYYYGSDKD------------------------------------ 57 (148)
T ss_dssp SSEEEEEEEEEECCCSSCSSCSEEEEEEEEE-TTEEEEESSTTC------------------------------------
T ss_pred CCccEEEEEEEeCCCCCCcCCCceeEEEEEE-CCEEEEEcCCCC------------------------------------
Confidence 467899999999753 3479999999998 678888876542
Q ss_pred CccccccceeecccceeeeCCC---CCCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHHHHHh
Q 006276 368 DEKSAARHTVNLLTSTIKVDAD---QSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIASL 430 (652)
Q Consensus 368 ~~~~~~~~~i~l~~~~vk~~~~---~~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~ai~~~ 430 (652)
..+.+.|.|..+++...++ ...++|||.|++++ ++|+|+|+|++|+++||.+|+.+|...
T Consensus 58 ---~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~ 121 (148)
T 1u5f_A 58 ---KQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQDL 121 (148)
T ss_dssp ---SSCSEEEECTTCEEEECTTSCSSTTGGGEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHCC--
T ss_pred ---cccceEEEcCCcEEEECCCcccCCCCccEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHh
Confidence 1234567777777664332 33556999999997 899999999999999999999998654
No 59
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=99.66 E-value=2.4e-16 Score=144.02 Aligned_cols=102 Identities=22% Similarity=0.412 Sum_probs=74.9
Q ss_pred ceeeeEEEeccC-CCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCcc
Q 006276 292 QTIRQGYLSKRS-SNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 370 (652)
Q Consensus 292 ~~~k~G~L~K~~-~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (652)
.+.++|||+|+. +...+.|+||||||+ ++.|+||+++.+. ..
T Consensus 4 ~v~~~G~L~K~~~~~~~~~WkrRwfvL~-~~~L~yyk~~~d~------------------------------------~~ 46 (134)
T 2y7b_A 4 SVEERGFLTIFEDVSGFGAWHRRWCVLS-GNCISYWTYPDDE------------------------------------KR 46 (134)
T ss_dssp CCCEEEEEEEEEEETTEEEEEEEEEEEE-TTEEEEESSHHHH------------------------------------TT
T ss_pred CceEEeeEEEEcCCCCCCCcEEEEEEEE-CCEEEEECCCCcc------------------------------------cc
Confidence 578999999983 234589999999999 5688888754220 01
Q ss_pred ccccceeecccce---eeeCCCC-CCCcccEEEEe--CC------------------eeEEEEeCCHHHHHHHHHHHHHH
Q 006276 371 SAARHTVNLLTST---IKVDADQ-SDLRFCFRIIS--PT------------------KNYTLQAESALDQMDWIEKITGV 426 (652)
Q Consensus 371 ~~~~~~i~l~~~~---vk~~~~~-~~rrfcF~I~t--~~------------------r~~~lqA~se~e~~~Wi~ai~~a 426 (652)
..+.+.|+|..|. |...... ..++|||+|.+ |. ++|+|+|+|++|+++||.+|+.+
T Consensus 47 ~~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~ 126 (134)
T 2y7b_A 47 KNPIGRINLANCTSRQIEPANREFCARRNTFELITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQV 126 (134)
T ss_dssp SCCSEEEEGGGBCSSSCEECCTTTCCCTTEEEEEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHH
T ss_pred cCceEEEEhhhCccccccccchhhccCCCEEEEEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHH
Confidence 2334667777776 4432221 35789999998 43 47999999999999999999999
Q ss_pred HHHh
Q 006276 427 IASL 430 (652)
Q Consensus 427 i~~~ 430 (652)
|..+
T Consensus 127 i~~~ 130 (134)
T 2y7b_A 127 LVDI 130 (134)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9754
No 60
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=99.65 E-value=2.9e-16 Score=141.51 Aligned_cols=100 Identities=24% Similarity=0.490 Sum_probs=75.3
Q ss_pred CceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCcc
Q 006276 291 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 370 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (652)
..++++|||+|+++ ..+.|+||||+|+ ++.|+||+++...
T Consensus 12 ~~~~~~G~L~K~g~-~~~~Wk~R~fvL~-~~~L~yy~~~~~~-------------------------------------- 51 (125)
T 1eaz_A 12 SAVIKAGYCVKQGA-VMKNWKRRYFQLD-ENTIGYFKSELEK-------------------------------------- 51 (125)
T ss_dssp CCCSEEEEEEEECT-TTCCEEEEEEEEC-SSEEEEESSTTCS--------------------------------------
T ss_pred CCccEEEEEEEeCC-CCCCcceEEEEEe-CCEEEEEcCCCCC--------------------------------------
Confidence 45789999999954 5589999999998 5678888765421
Q ss_pred ccccceeecccce-eeeCC--CCCCCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHHHHHhh
Q 006276 371 SAARHTVNLLTST-IKVDA--DQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLL 431 (652)
Q Consensus 371 ~~~~~~i~l~~~~-vk~~~--~~~~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~ai~~~l 431 (652)
.+.+.|+|..+. |.... +...++|||+|++++++|+|+|+|++|+++||.+|+.+|....
T Consensus 52 -~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~W~~al~~~i~~~~ 114 (125)
T 1eaz_A 52 -EPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQR 114 (125)
T ss_dssp -SCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHHTC
T ss_pred -cceeEEEcccceEEeeccccccCCcCCEEEEEeCCcEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 123455555443 22211 1235689999999999999999999999999999999997543
No 61
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=99.65 E-value=4.7e-16 Score=148.37 Aligned_cols=101 Identities=16% Similarity=0.314 Sum_probs=69.5
Q ss_pred ceeeeEEEeccCCC----CCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCC
Q 006276 292 QTIRQGYLSKRSSN----LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVH 367 (652)
Q Consensus 292 ~~~k~G~L~K~~~~----~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 367 (652)
.++|+|||.|++.+ .++.|+||||||+ ++.|+||+++...
T Consensus 2 ~vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~-~~~L~Yyk~~~~~----------------------------------- 45 (169)
T 1btk_A 2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLT-VHKLSYYEYDFER----------------------------------- 45 (169)
T ss_dssp CCCEEEEEEEECCCSSTTCCCCEEEEEEEEC-SSEEEEEEEETTT-----------------------------------
T ss_pred ceEEEEEEEEecCCCCCcccCCCceEEEEEc-CCEEEEEecCCcc-----------------------------------
Confidence 46899999998643 2478999999998 5678888763110
Q ss_pred Cccccccceeecccce-eeeC---CC-CCCC---------------------cccEEEEeCCeeEEEEeCCHHHHHHHHH
Q 006276 368 DEKSAARHTVNLLTST-IKVD---AD-QSDL---------------------RFCFRIISPTKNYTLQAESALDQMDWIE 421 (652)
Q Consensus 368 ~~~~~~~~~i~l~~~~-vk~~---~~-~~~r---------------------rfcF~I~t~~r~~~lqA~se~e~~~Wi~ 421 (652)
.....+.+.|.|..+. |... .+ ...+ +|||+|++++++|+|+|+|++|+++||.
T Consensus 46 ~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~F~I~t~~rt~yl~A~s~~E~~eWi~ 125 (169)
T 1btk_A 46 GRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIH 125 (169)
T ss_dssp TEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC---------CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHHHH
T ss_pred CCCCceeeEEECcceEEEEeccCCCCcchhcccccccCcccccccccccccccccEEEEeCCceEEEEcCCHHHHHHHHH
Confidence 0011223445554332 2111 00 1111 2899999999999999999999999999
Q ss_pred HHHHHHH
Q 006276 422 KITGVIA 428 (652)
Q Consensus 422 ai~~ai~ 428 (652)
+|+.+|.
T Consensus 126 aI~~~i~ 132 (169)
T 1btk_A 126 QLKNVIR 132 (169)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 9999986
No 62
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=99.65 E-value=1.7e-16 Score=143.58 Aligned_cols=107 Identities=15% Similarity=0.251 Sum_probs=74.9
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 371 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (652)
.+.++|||+|+++ ..+.|++|||||.+ ..|+||+++.....-.. + .-+
T Consensus 11 ~~~k~G~L~K~g~-~~k~Wk~RwfVL~~-~~L~yyk~~~~~~~e~~------------------------p------lg~ 58 (124)
T 2w2x_D 11 EHKQQGELYMWDS-IDQKWTRHFCAIAD-AKLSFSDDIEQTMEEDN------------------------P------LGS 58 (124)
T ss_dssp --CCEEEEEEEET-TTTEEEEEEEEEET-TEEEEEEEHHHHHHCSS------------------------C------CCC
T ss_pred hcceeEEEEEECC-CCCCceEeEEEEEC-CEEEEEccccccccccc------------------------c------cCC
Confidence 5689999999964 45899999999995 55777766421000000 0 001
Q ss_pred cccceeecccceeeeCCCC-CCCcccEEEEeCC---eeEEEEeCCHHHHHHHHHHHHHHHHHh
Q 006276 372 AARHTVNLLTSTIKVDADQ-SDLRFCFRIISPT---KNYTLQAESALDQMDWIEKITGVIASL 430 (652)
Q Consensus 372 ~~~~~i~l~~~~vk~~~~~-~~rrfcF~I~t~~---r~~~lqA~se~e~~~Wi~ai~~ai~~~ 430 (652)
.+.+.|+|..|.|....+. ..++|||+|.++. ++|+|+|+|++|+++||.||+.++..+
T Consensus 59 ~~~G~I~L~~~~v~~~~~~~~~k~~~F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~~ 121 (124)
T 2w2x_D 59 LCRGILDLNTYNVVKAPQGKNQKSFVFILEPKQQGDPPVEFATDKVEELFEWFQSIREITWKI 121 (124)
T ss_dssp SCSEEEEGGGEEEEECTTCBTTBSEEEEEEECC--CCCEEEEECCCHHHHHHHHHHHHHHC--
T ss_pred ccccEEECCCCEEEEccCCcCCCCEEEEEECCCCCCceEEEEECCHHHHHHHHHHHHHHHHhh
Confidence 2357788888887764332 4578999999864 679999999999999999999997543
No 63
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=99.64 E-value=6.5e-16 Score=147.14 Aligned_cols=100 Identities=21% Similarity=0.408 Sum_probs=69.1
Q ss_pred eeeeEEEecc---------CCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccC
Q 006276 293 TIRQGYLSKR---------SSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYH 363 (652)
Q Consensus 293 ~~k~G~L~K~---------~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (652)
++++|||+++ .+...+.|++|||||+ ++.|+||+++....
T Consensus 3 v~~eG~L~~k~~~~~~gkK~g~~~k~WkkRwfvL~-~~~L~yyk~~~~~~------------------------------ 51 (168)
T 2j59_M 3 AAKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLR-GHSLYLYKDKREQT------------------------------ 51 (168)
T ss_dssp CCEEEEEEEEECC------------CCEEEEEEEE-TTEEEEESCTTCC-------------------------------
T ss_pred CcEEEEEeeeeecccCCcccCCCCCCceEEEEEEe-CCEEEEEECCcccc------------------------------
Confidence 5799999942 2345688999999999 67888887764310
Q ss_pred CCCCCccccccceeecccceeeeCCCCCCCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 364 GGVHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 364 g~~~~~~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
........|.+..|.+.+..+...++|||+|++++++|+|+|+|++|+++||.+|+.++.
T Consensus 52 -----~~~~g~i~l~~~~~~~~~~~~~~~~~~~F~I~t~~r~~~l~A~s~~e~~~Wi~ai~~~~~ 111 (168)
T 2j59_M 52 -----TPSEEEQPISVNACLIDISYSETKRKNVFRLTTSDCECLFQAEDRDDMLAWIKTIQESSN 111 (168)
T ss_dssp ------------CEECSSCEEEECSSSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred -----cccCCceEecccceEEEeccccCCCCCEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHh
Confidence 000111123444465555445567889999999999999999999999999999998864
No 64
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=99.64 E-value=3.8e-16 Score=140.74 Aligned_cols=106 Identities=15% Similarity=0.358 Sum_probs=76.5
Q ss_pred ceeeeEEEeccCC----C---CCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCC
Q 006276 292 QTIRQGYLSKRSS----N---LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHG 364 (652)
Q Consensus 292 ~~~k~G~L~K~~~----~---~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 364 (652)
.+.++|||.++.. + .++.|++|||+|+ ++.|+||+++...... +
T Consensus 7 ~v~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~-~~~L~~yk~~~~~~~~----------------------------~ 57 (122)
T 1dro_A 7 GEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAK-AGRISFYKDQKGYKSN----------------------------P 57 (122)
T ss_dssp SSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEES-SSCCBEESSSSHHHHC----------------------------T
T ss_pred ceEEEEEEEEEEEEeCCCccCCCCCccEEEEEEE-CCEEEEEeCCcccccC----------------------------C
Confidence 5689999987642 1 4589999999998 5667777766431000 0
Q ss_pred CCCCccccccceeecccceeeeCCCCCCCcccEEEEeC-CeeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006276 365 GVHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISP-TKNYTLQAESALDQMDWIEKITGVIAS 429 (652)
Q Consensus 365 ~~~~~~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~-~r~~~lqA~se~e~~~Wi~ai~~ai~~ 429 (652)
++ ...+...|+|..|.+.+..+...|+|||+|+++ .++|+|||+|++||++||.+|+.+|..
T Consensus 58 ~~---~~~~~~~i~L~~~~v~~~~d~~kr~~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i~~ 120 (122)
T 1dro_A 58 EL---TFRGEPSYDLQNAAIEIASDYTKKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSDS 120 (122)
T ss_dssp TC---CSSCCCBCCCSSCCCEECCSSSSSTTEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHHTC
T ss_pred Cc---ccCCCceEECCCCEEEeCCCCCCCCeEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 00 001124567777777765555678999999974 589999999999999999999999864
No 65
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=99.64 E-value=1.2e-15 Score=134.66 Aligned_cols=95 Identities=16% Similarity=0.279 Sum_probs=70.6
Q ss_pred ceeeeEEEeccCCCCCC-CceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCcc
Q 006276 292 QTIRQGYLSKRSSNLRG-DWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 370 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~-~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (652)
.++++|||+|+.++.++ +|++|||||. +..|+||++....
T Consensus 11 ~VirkGWL~k~~~g~~k~~wk~rWFVLt-~~~L~yyKd~~ek-------------------------------------- 51 (125)
T 1dyn_A 11 LVIRKGWLTINNIGIMKGGSKEYWFVLT-AENLSWYKDDEEK-------------------------------------- 51 (125)
T ss_dssp CEEEEEEEEESCCCGGGTSSEEEEEEEE-SSEEEEESSTTCS--------------------------------------
T ss_pred ceEEEEEEEEecCccccCCceeeEEEEe-ccceeeecCCccc--------------------------------------
Confidence 47999999997666666 5999999999 5566677665431
Q ss_pred ccccceeecccceeeeCCC-CCCCcccEEEEeCC--------eeEEEEeCCHHHHHHHHHHHHHH
Q 006276 371 SAARHTVNLLTSTIKVDAD-QSDLRFCFRIISPT--------KNYTLQAESALDQMDWIEKITGV 426 (652)
Q Consensus 371 ~~~~~~i~l~~~~vk~~~~-~~~rrfcF~I~t~~--------r~~~lqA~se~e~~~Wi~ai~~a 426 (652)
.+.+.|.|-...++...+ ...++|||+|.+++ ++|.|.|+|.+|+++||++|..|
T Consensus 52 -e~~G~IpL~~~~vr~v~~~~~~rk~~F~l~~~d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra 115 (125)
T 1dyn_A 52 -EKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRA 115 (125)
T ss_dssp -CEEEEEECTTEEEEECCSCSSSSCEEEEEEETTSSCSSTTCSSEEEEESSHHHHHHHHHHHHHT
T ss_pred -ccceEEECCCceEeccCCCCCCCceEEEEECCCCccccccceEEEEeCCCHHHHHHHHHHHHhC
Confidence 233455665666654222 13678999999976 38999999999999999999555
No 66
>1zww_A SH3-containing GRB2-like protein 2; coiled coil, transferase; 2.30A {Mus musculus} SCOP: a.238.1.1 PDB: 1x03_A 2d4c_A 1x04_A 2c08_A
Probab=99.60 E-value=1.1e-13 Score=140.92 Aligned_cols=191 Identities=20% Similarity=0.315 Sum_probs=159.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh-------------hhccc--------c-hHHHHHHHHHHhhCCCCCCCcccc
Q 006276 16 IQGLEESAEVLRERSLKFYKGCRKYTEG-------------LGEGY--------D-GDIAFASALETFGGGHNDPISVAF 73 (652)
Q Consensus 16 v~~~E~~le~l~~~l~kl~K~~kk~~~~-------------~~~~~--------~-~~~~f~~~L~~f~~~~~d~~~~~~ 73 (652)
...+|.+++.++.+++++.+.++.|.+. +.+++ - ....|+.++..++..+.++..+
T Consensus 33 ~~~lE~r~d~~k~~~~kl~k~~~~yl~~np~~r~~~~~~~~i~k~~g~~k~~~~p~~~~~L~~~m~~~~~~l~~~s~~-- 110 (256)
T 1zww_A 33 FKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLSMINTMSKIRGQEKGPGYPQAEALLAEAMLKFGRELGDDCNF-- 110 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTTC---------------------CCHHHHHHHHHHHHHHHHCSSSSH--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHhhCCCCChH--
Confidence 4678999999999999999999988653 22211 1 1136777776666543333333
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCChhhHhH
Q 006276 74 GGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQYVNIDLHEVKEARKCFDKASLLYDQAREKFLSLRKGTKTDVAAI 153 (652)
Q Consensus 74 ~g~~L~~f~~~lkel~~~~~~l~~~~~~~i~~pL~~f~~~di~~~ke~Rk~Fek~~~~YD~al~ky~s~~K~k~~~~~~E 153 (652)
|.+|..|+.+.++|...+..+...+...++.||.+|++.+|+.+...||++++.+.+||++..|+...
T Consensus 111 -g~aL~~~g~a~~~la~~~~~~~~~i~~~~l~pl~~~l~~~~k~i~k~rkkl~~~rLdyD~~k~k~~k~----------- 178 (256)
T 1zww_A 111 -GPALGEVGEAMRELSEVKDSLDMEVKQNFIDPLQNLHDKDLREIQHHLKKLEGRRLDFGYKKKRQGKI----------- 178 (256)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTTTS-----------
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----------
Confidence 57999999999999999999999999999999999999999999999999999999999999886321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 006276 154 LEEELHSARSAFEQARFSLVTALSNVEAKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLT 221 (652)
Q Consensus 154 ~~~eL~~~Rk~f~~aslDyv~~l~~l~~~k~~e~le~l~~~~~aq~~ff~~g~e~~~~l~~~l~el~~ 221 (652)
++.+|..++..|....-++...|..+... +.+++..|..|+.+|..||.++++.+.++.+++++...
T Consensus 179 ~eeEle~A~~~fe~~~e~~~~~m~~l~~~-e~e~~~~L~~~v~aQl~y~~~~~e~L~~l~~~l~~~~~ 245 (256)
T 1zww_A 179 PDEELRQALEKFDESKEIAESSMFNLLEM-DIEQVSQLSALVQAQLEYHKQAVQILQQVTVRLEERIR 245 (256)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678899999999999999999999866 47999999999999999999999999999888876543
No 67
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=99.60 E-value=4.5e-15 Score=151.48 Aligned_cols=107 Identities=24% Similarity=0.402 Sum_probs=79.7
Q ss_pred CceeeeEEEe--------ccCCCC----CCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCccccccccccccc
Q 006276 291 VQTIRQGYLS--------KRSSNL----RGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWL 358 (652)
Q Consensus 291 ~~~~k~G~L~--------K~~~~~----~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (652)
..++|+|||+ |+ +.. ++.|++|||||++ +.|+||+++.....
T Consensus 9 ~~v~K~G~L~~k~~~~~~K~-g~~~~~~~K~WkrRWfVL~~-~~L~yyK~~~~~~~------------------------ 62 (263)
T 3a8p_A 9 GVVRKAGWLFFKPLVTLQKE-RKLELVARRKWKQYWVTLKG-CTLLFYETYGKNST------------------------ 62 (263)
T ss_dssp -CEEEEEEEEEEEEEEEEGG-GEEEECTTCCCEEEEEEEET-TEEEEESSCCC---------------------------
T ss_pred CCeEEEEEeeecccccccCC-CCccCccCCCceEEEEEEcC-CEEEEEecCccccc------------------------
Confidence 3589999999 44 443 6899999999994 57778876532100
Q ss_pred ccccCCCCCCccccccceeecccceeeeCCCCCCCcccEEEEeC-CeeEEEEeCCHHHHHHHHHHHHHHHHHhhc
Q 006276 359 SSHYHGGVHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISP-TKNYTLQAESALDQMDWIEKITGVIASLLS 432 (652)
Q Consensus 359 ~~~~~g~~~~~~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~-~r~~~lqA~se~e~~~Wi~ai~~ai~~~l~ 432 (652)
+....+.+.|+|..|.+....+...++|||+|+++ .++|+|||+|++|+++||.+|+.++.....
T Consensus 63 ---------~~~~~p~g~I~L~~~~v~~~~~~~kk~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~~~ 128 (263)
T 3a8p_A 63 ---------EQNSAPRCALFAEDSIVQSVPEHPKKEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACASLFA 128 (263)
T ss_dssp ------------CCCSEEEECTTCEEEECTTCSSCSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------ccccCccceEEcCCcEEEECCcCCCCCCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHHhccc
Confidence 01123446678877877754555568999999994 689999999999999999999999987754
No 68
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=99.59 E-value=6.9e-15 Score=133.03 Aligned_cols=109 Identities=20% Similarity=0.324 Sum_probs=76.8
Q ss_pred ceeeeEEEeccC-----CC-CCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCC
Q 006276 292 QTIRQGYLSKRS-----SN-LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGG 365 (652)
Q Consensus 292 ~~~k~G~L~K~~-----~~-~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 365 (652)
.+.|+|||.++. +. ..+.|++|||||+ ++.|+||+++.....+.. +
T Consensus 7 ~v~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~-~~~L~~yKd~~~~~~~~~---------~------------------ 58 (124)
T 3pp2_A 7 TLDKAGVLHRTKTADKGKRLRKKHWSASWTVLE-GGVLTFFKDSKTSAAGGL---------R------------------ 58 (124)
T ss_dssp --CEEEEEEEEEEEETTEECSSCCCEEEEEEEE-TTEEEEESCSBCC---CB---------C------------------
T ss_pred cEEEEEEEEEEEeccCCccCCCCCceEEEEEEE-CCEEEEEecCccccccCc---------c------------------
Confidence 578999999762 22 2358999999999 567788876643210000 0
Q ss_pred CCCccccccceeecccceeeeCC-CCCCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 366 VHDEKSAARHTVNLLTSTIKVDA-DQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 366 ~~~~~~~~~~~i~l~~~~vk~~~-~~~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
.+.....+...|+|..|.+...+ +...|+|+|+|.+++ +.|.|||+|++||++||.+|+.||+
T Consensus 59 ~~~~~~~~~~~i~L~~a~v~~~~~d~~krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 59 QPSKFSTPEYTVELRGATLSWAPKDKSSRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp CGGGGCSEEEEEECTTCEEEECCGGGCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred CcccccCCcceEEcCCCEEEecccccCCCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence 00000123467888888887754 566789999999876 7899999999999999999999985
No 69
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=99.54 E-value=1.8e-14 Score=144.22 Aligned_cols=97 Identities=26% Similarity=0.520 Sum_probs=77.4
Q ss_pred CCceeeeEEEeccCCCC----CCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCC
Q 006276 290 KVQTIRQGYLSKRSSNL----RGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGG 365 (652)
Q Consensus 290 ~~~~~k~G~L~K~~~~~----~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 365 (652)
...++++|||.|+++.. .+.|+||||+|+ ++.|+||+++..
T Consensus 55 ~~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~-~~~L~Yyk~~~~---------------------------------- 99 (228)
T 3tfm_A 55 KQEALKQGWLHNNGGGSSTLSRRNWKKRWFVLR-QSKLMYFENDSE---------------------------------- 99 (228)
T ss_dssp CCCSSEEEEEEECGGGCSSSCGGGCEEEEEEEC-SSEEEEESSTTC----------------------------------
T ss_pred CCCcceEEEEEEECCCcCCcccCCceEEEEEEe-CCEEEEEeCCCC----------------------------------
Confidence 34678999999997532 389999999999 678888877642
Q ss_pred CCCccccccceeecccceeeeCCCCCCCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 366 VHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 366 ~~~~~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
..+.+.|+|..+.+.. +...++|||+|++++++|+|+|+|++|+++||.+|+.+|.
T Consensus 100 -----~~~~g~I~L~~~~~v~--~~~~k~~~F~I~t~~r~~~l~A~s~~e~~~Wv~aL~~~i~ 155 (228)
T 3tfm_A 100 -----EKLKGTVEVRSAKEII--DNTNKENGIDIIMADRTFHLIAESPEDASQWFSVLSQVHS 155 (228)
T ss_dssp -----CSEEEEEEGGGCSEEE--EETTTTSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred -----cceeEEEEcCCCEEec--cCCCCCcEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 1234567777666532 2236789999999999999999999999999999999986
No 70
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=99.53 E-value=1.8e-14 Score=146.92 Aligned_cols=100 Identities=22% Similarity=0.384 Sum_probs=74.0
Q ss_pred CceeeeEEEeccCCCCCCCceeEEEEEecCc------eEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCC
Q 006276 291 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRG------MLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHG 364 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g------~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 364 (652)
..++++|||.|+ +.|+||||||++++ .|+||+++.+...
T Consensus 8 ~~v~k~G~L~K~-----K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~------------------------------ 52 (264)
T 1qqg_A 8 SDVRKVGYLRKP-----KSMHKRFFVLRAASEAGGPARLEYYENEKKWRH------------------------------ 52 (264)
T ss_dssp -CEEEEEEEECT-----TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHT------------------------------
T ss_pred CCccEEEEEEEC-----CCCEeEEEEEECCCCCCCCCEEEEECCCccccc------------------------------
Confidence 467999999998 68999999999762 8999977643100
Q ss_pred CCCCccccccceeecccce-eeeCCCCCCCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHHHHHh
Q 006276 365 GVHDEKSAARHTVNLLTST-IKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASL 430 (652)
Q Consensus 365 ~~~~~~~~~~~~i~l~~~~-vk~~~~~~~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~ai~~~ 430 (652)
....+.+.|+|..|. |.... +..++|||.|++++++|+|+|+|++|+++||.+|+.++...
T Consensus 53 ----~~~~p~g~I~L~~~~~V~~~~-~~~~~~~F~I~t~~rty~l~A~se~e~~~Wi~aL~~~~~~~ 114 (264)
T 1qqg_A 53 ----KSSAPKRSIPLESCFNINKRA-DSKNKHLVALYTRDEHFAIAADSEAEQDSWYQALLQLHNRA 114 (264)
T ss_dssp ----TCSCCSEEEEGGGEEEEEEEC-CSSCSSEEEEEESSCEEEEECSSHHHHHHHHHHHHHHC---
T ss_pred ----cccCcceEEEeeceEEEEecc-CCCCCcEEEEEECCEEEEEEeCCHHHHHHHHHHHHHHHHhc
Confidence 001234567776654 33322 34678999999999999999999999999999999998654
No 71
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.52 E-value=5.8e-14 Score=151.06 Aligned_cols=98 Identities=17% Similarity=0.430 Sum_probs=72.5
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 371 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (652)
.++++|||.|+++..++.|+||||||+ ++.|+||+++...
T Consensus 268 ~~~k~G~L~K~g~~~~k~WKkRwFVL~-~~~L~YYk~~~d~--------------------------------------- 307 (386)
T 3lju_X 268 NYLKEGYMEKTGPKQTEGFRKRWFTMD-DRRLMYFKDPLDA--------------------------------------- 307 (386)
T ss_dssp CCSEEEEEEECCTTSCSCCEEEEEEEE-TTEEEEESSTTCS---------------------------------------
T ss_pred ccceeeeEEEECCCCCCCCcccEEEEE-CCEEEEEecCCCc---------------------------------------
Confidence 478999999997665589999999999 7788888876432
Q ss_pred cccceeecccce----eee-CCCCC---CCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006276 372 AARHTVNLLTST----IKV-DADQS---DLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIAS 429 (652)
Q Consensus 372 ~~~~~i~l~~~~----vk~-~~~~~---~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~ai~~ 429 (652)
.+.+.|.|..+. |.. .+... .++|||+|++++|+|+|+|+|++|+++||.||+.+|..
T Consensus 308 ~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~~F~I~t~~rty~l~A~s~~e~~~Wi~aL~~~i~~ 373 (386)
T 3lju_X 308 FARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDR 373 (386)
T ss_dssp BCSEEEECCCGGGTCEEEESCCTTCCSCCSCEEEEEECSSCEEEEEESSHHHHHHHHHHHHHHHHS
T ss_pred ccceEEEeecceeeeeecccCCccccccCCCcEEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 112334442221 111 11111 12699999999999999999999999999999999874
No 72
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=99.51 E-value=5.1e-14 Score=149.63 Aligned_cols=95 Identities=26% Similarity=0.550 Sum_probs=76.6
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 371 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (652)
.++++|||.|+++. .+.|+||||||+ ++.|+||+++.. .
T Consensus 212 ~~~k~G~L~K~g~~-~k~WkkRwFVL~-~~~L~Yyk~~~~---------------------------------------~ 250 (347)
T 2r09_A 212 NPDREGWLLKLGGR-VKTWKRRWFILT-DNCLYYFEYTTD---------------------------------------K 250 (347)
T ss_dssp CCCEEEEEEEECSS-SCCEEEEEEEEE-TTEEEEESSTTC---------------------------------------S
T ss_pred ccccCCeeEecCCC-cccceeEEEEEc-CCEEEEEcCCCc---------------------------------------c
Confidence 36899999999654 589999999998 678888876542 1
Q ss_pred cccceeecccceeeeCCCCCCCcccEEEEeC----------------------CeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 372 AARHTVNLLTSTIKVDADQSDLRFCFRIISP----------------------TKNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 372 ~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~----------------------~r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
.+.+.|.|..|.|... +...++|||+|.++ .++|+|+|+|++|+++||.+|+.+|.
T Consensus 251 ~p~G~I~L~~~~v~~~-~~~~~~~~F~I~~~~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~ 328 (347)
T 2r09_A 251 EPRGIIPLENLSIREV-EDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS 328 (347)
T ss_dssp SCSEEEECTTCEEEEE-CCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEcCCeEEEEc-cCCCCCCEEEEEeCCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 2345677777777653 34578999999987 37899999999999999999999986
No 73
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=99.50 E-value=2.2e-13 Score=122.35 Aligned_cols=103 Identities=20% Similarity=0.380 Sum_probs=75.1
Q ss_pred eeeEEEe-----ccCCC-CCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCC
Q 006276 294 IRQGYLS-----KRSSN-LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVH 367 (652)
Q Consensus 294 ~k~G~L~-----K~~~~-~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 367 (652)
.++|+|. |.++. ..++|+||||+|. +..||||+..... |. .-.
T Consensus 2 ~~~G~L~rk~llK~G~k~~~ksWkr~W~vL~-g~~L~yf~~~~~~--~~----------------------------~~~ 50 (126)
T 2dtc_A 2 TMEGPLRRKTLLKEGRKPALSSWTRYWVVLS-GATLLYYGAKSLR--GT----------------------------DRK 50 (126)
T ss_dssp CEEEEEEEEEEEBTTBCCSSCCCEEEEEEEE-TTEEEEEEBSSSC--CS----------------------------SGG
T ss_pred ceeeeeeeeehhhcCCcccccCcccEEEEEe-CCEEEEEcccccc--cc----------------------------ccc
Confidence 3577776 44543 3689999999999 5567777654210 00 000
Q ss_pred CccccccceeecccceeeeCCCCCCCcccEEEEeC--CeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 368 DEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISP--TKNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 368 ~~~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~--~r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
+....+.+.|.|.++.|. ..+...++|||+|.++ +..|.|||+|+++++.||.+|..+|.
T Consensus 51 ~~~~~P~~~i~L~g~~V~-~~e~~~~~~~F~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~ 112 (126)
T 2dtc_A 51 HYKSTPGKKVSIVGWMVQ-LPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACK 112 (126)
T ss_dssp GBCSSCSEEEECTTCEEE-CCCCTTSTTEEEEECTTSCSEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred ccccCCCceEEeCCCEEE-ecCCCCCCCEEEEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 112345577889999998 4666678999999987 47899999999999999999999876
No 74
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=99.43 E-value=3.7e-13 Score=139.32 Aligned_cols=101 Identities=21% Similarity=0.316 Sum_probs=68.1
Q ss_pred CCCceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCC
Q 006276 289 GKVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHD 368 (652)
Q Consensus 289 ~~~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 368 (652)
....+.++|||+|+++. .+.|+||||||++ +.|+||+++...... |.
T Consensus 164 ~~~~p~~~G~L~k~~~~-~k~WkkR~fvL~~-~~L~yyk~~~~~~~~----------------------------~~--- 210 (291)
T 3tca_A 164 SIIVPELEGALYLKEDG-KKSWKRRYFLLRA-SGIYYVPKGKTKTSR----------------------------DL--- 210 (291)
T ss_dssp SCCCCCCEEEEEEECTT-SSCEEEEEEEECS-SEEEECCTTCCSSTT----------------------------TC---
T ss_pred CCCCCceEEEEEEeCCC-CCCceEEEEEEeC-CEEEEEecCcccccc----------------------------Cc---
Confidence 34567899999999654 5899999999984 557777665432100 00
Q ss_pred ccccccceeecccceeeeCC-----CCCCCcccEEEEeCC------eeEEEEeCCHHHHHHHHHHHHHHH
Q 006276 369 EKSAARHTVNLLTSTIKVDA-----DQSDLRFCFRIISPT------KNYTLQAESALDQMDWIEKITGVI 427 (652)
Q Consensus 369 ~~~~~~~~i~l~~~~vk~~~-----~~~~rrfcF~I~t~~------r~~~lqA~se~e~~~Wi~ai~~ai 427 (652)
...+++..+.+.... ....++|||.|++++ ++|+|+|+|++|+..||.||+.|.
T Consensus 211 -----i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 211 -----ACFIQFENVNIYYGIQCKMKYKAPTDHCFVLKHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAK 275 (291)
T ss_dssp -----EEEEEGGGCEEEEECSHHHHHCCSSSCEEEEECTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHH
T ss_pred -----eeeccceeEEEEecCccccccCCCCCeEEEEEcCCCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 001122222222111 123568999999875 469999999999999999999885
No 75
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=99.38 E-value=2.7e-12 Score=117.57 Aligned_cols=128 Identities=22% Similarity=0.369 Sum_probs=78.4
Q ss_pred eeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCC-CCCCCC----CcccccCcc--cccc-cccc--------cc
Q 006276 294 IRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSK-SSGSGS----QLSSQRNSS--ELGS-GLLS--------RW 357 (652)
Q Consensus 294 ~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~-~~~~~~----~~~~~~~~~--~~~~-~~~~--------~~ 357 (652)
+|+|||+++. +..+.|++|||||. +..|||++..... .++... ..++...+. +.+- |-.- ..
T Consensus 2 ~k~G~L~~~~-~~~~~w~~~~fvL~-~~~L~y~~e~s~~~~~~~~e~~~~~~~~~~~~~~~n~~fh~~~~~~~e~~~~~l 79 (150)
T 2fjl_A 2 IKNGILYLED-PVNHEWYPHYFVLT-SSKIYYSEETSSDQGNEDEEEPKEASGSTELHSSLEVLFQGPNPAILEPEREHL 79 (150)
T ss_dssp CEEEEEEEEE-TTTTEEEEEEEEEE-TTEEEECCCCSCSSCCSCCCCSCCCCCSCCCCCCSSSGGGSSCSTTSCTTCSSS
T ss_pred CcceEEEeec-CCCCCceEeEEEEE-CCEEEEEeeccccccccCcccccccCCchhhcccchhccccCCccccchhHhcc
Confidence 6899999995 56799999999999 6677776521100 000000 000000000 0000 0000 00
Q ss_pred cccccCCCCCCccccccceeecccceeeeCCC-CCCCcccEEEEeCC---eeEEEEeCCHHHHHHHHHHHHHHHHH
Q 006276 358 LSSHYHGGVHDEKSAARHTVNLLTSTIKVDAD-QSDLRFCFRIISPT---KNYTLQAESALDQMDWIEKITGVIAS 429 (652)
Q Consensus 358 ~~~~~~g~~~~~~~~~~~~i~l~~~~vk~~~~-~~~rrfcF~I~t~~---r~~~lqA~se~e~~~Wi~ai~~ai~~ 429 (652)
....++|. ...+.|+|.+|.|...+. ..+++|+|+|.+++ ++|.|.|+|.+||.+||.+|+.|+..
T Consensus 80 ~E~~~lG~------l~kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~~ 149 (150)
T 2fjl_A 80 DENSPLGD------LLRGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQT 149 (150)
T ss_dssp CTTTTTTT------CCCEEECSTTCEEEEETTCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHTT
T ss_pred cccccccc------cccceEecCccEEEeccCCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 00111111 235889999999976543 34688999999985 58999999999999999999999753
No 76
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=99.32 E-value=2.6e-12 Score=130.87 Aligned_cols=107 Identities=20% Similarity=0.384 Sum_probs=76.6
Q ss_pred CceeeeEEEeccC-------C----CCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccc
Q 006276 291 VQTIRQGYLSKRS-------S----NLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLS 359 (652)
Q Consensus 291 ~~~~k~G~L~K~~-------~----~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (652)
..+.|+|||.++. + ...+.|++|||||+ ++.|+||+++.....
T Consensus 9 ~~v~k~G~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLk-g~~L~fYKde~~~~~------------------------- 62 (279)
T 3a8n_A 9 GTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLK-GCTLFFYETDGRSGI------------------------- 62 (279)
T ss_dssp -CCSCEEEEEEEEEEEEETTTEEECCCCCCCEEEEEEEE-TTEECCBCCC------------------------------
T ss_pred CceeEEEEEEEEEEecccCCcccCCccCCCCeEEEEEEe-CCEEEEEeccccccc-------------------------
Confidence 4578999996431 1 13579999999999 677888877643100
Q ss_pred cccCCCCCCccccccceeecccceeeeCCCCCCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHHHHHhh
Q 006276 360 SHYHGGVHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIASLL 431 (652)
Q Consensus 360 ~~~~g~~~~~~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~ai~~~l 431 (652)
+....+...|.|..|.+...++...++|+|.|.+++ +.|.|||+|++||+.||.+|+.++....
T Consensus 63 --------~~~~~p~~~I~L~ga~v~~a~d~~kKk~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI~~a~~~~~ 127 (279)
T 3a8n_A 63 --------DHNSVPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACAAAV 127 (279)
T ss_dssp -----------CCCSSCCBCCSCEECCCTTSSSSCSCCCEEETTTEEEECCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred --------ccccCCCceEeccCcEEEeccccCCCCcEEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHhhhc
Confidence 001123345777778777556667789999999875 6899999999999999999999987543
No 77
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=99.31 E-value=4.8e-12 Score=112.93 Aligned_cols=97 Identities=21% Similarity=0.446 Sum_probs=63.2
Q ss_pred eeEEEec-cCCCCCC-CceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCcccc
Q 006276 295 RQGYLSK-RSSNLRG-DWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKSA 372 (652)
Q Consensus 295 k~G~L~K-~~~~~~~-~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 372 (652)
.+|||.+ +.++..+ .|+||||+|. ++.|+||+.+.... ...
T Consensus 3 ~eGwl~~pk~~~~~k~~Wkkr~~vL~-~~kL~~y~~~~~~~------------------------------------~~~ 45 (117)
T 2rov_A 3 LEGWLSLPVRNNTKKFGWVKKYVIVS-SKKILFYDSEQDKE------------------------------------QSN 45 (117)
T ss_dssp SEEEEECCCCSSSSCCCCCEEEEEEE-TTEEEEESCHHHHH------------------------------------TTC
T ss_pred eEEEEEeecCCCccCCCcEEEEEEEE-CCEEEEEECCCCcc------------------------------------cCC
Confidence 4899996 2245556 8999999998 56677776542100 001
Q ss_pred ccceeecccc-eee-------eCCCCCCCcccEEEEeC------CeeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 373 ARHTVNLLTS-TIK-------VDADQSDLRFCFRIISP------TKNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 373 ~~~~i~l~~~-~vk-------~~~~~~~rrfcF~I~t~------~r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
+.+.|++-.+ +|. ......+.++.|+|+.+ .++++|.|+|++|+++||.+|+.+|.
T Consensus 46 p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~ 115 (117)
T 2rov_A 46 PYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQILYANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP 115 (117)
T ss_dssp CSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEEEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred ceEEEECcccEEEEEcccccccccccccCCcEEEEEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 1123333111 111 11223345789999863 48999999999999999999998874
No 78
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.28 E-value=1.2e-11 Score=111.04 Aligned_cols=97 Identities=15% Similarity=0.303 Sum_probs=74.7
Q ss_pred ceeeeEEEeccCCC--CCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCc
Q 006276 292 QTIRQGYLSKRSSN--LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 369 (652)
Q Consensus 292 ~~~k~G~L~K~~~~--~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 369 (652)
.|..++||.++... ..++|+||||+|+ +..|+||+++.+..
T Consensus 8 ~pel~~~l~~~~pkk~tlK~~KrrWFvlk-~~~L~YyK~kee~~------------------------------------ 50 (137)
T 2ys3_A 8 IPELKDHLRIFRPRKLTLKGYRQHWVVFK-ETTLSYYKSQDEAP------------------------------------ 50 (137)
T ss_dssp CCCEECCCEECCTTSCCSSSSCCCEEEEC-SSCEEEESSTTTTT------------------------------------
T ss_pred CcchhHHHHhhCccccccccceeEEEEEe-CCEEEEECCchhcc------------------------------------
Confidence 56789999877533 3479999999999 56788887664410
Q ss_pred cccccceeecccceeeeCCCCCCCcccEEEEeCC----eeEEEEeCCHHHHHHHHHHHHHH
Q 006276 370 KSAARHTVNLLTSTIKVDADQSDLRFCFRIISPT----KNYTLQAESALDQMDWIEKITGV 426 (652)
Q Consensus 370 ~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~----r~~~lqA~se~e~~~Wi~ai~~a 426 (652)
..+.+.|+|..|.|.++.....++|+|.|..|. ++|.|.|+||+++.+||+|++.|
T Consensus 51 -~ePig~I~L~gceV~pd~~~~~~kf~ikl~iPs~~g~r~y~l~cdsEeqy~~WMaA~rlA 110 (137)
T 2ys3_A 51 -GDPIQQLNLKGCEVVPDVNVSGQKFCIKLLVPSPEGMSEIYLRCQDEQQYARWMAGCRLA 110 (137)
T ss_dssp -SCCSCCBCTTTCEEEECCBGGGTBEEEEEEEECSSSEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred -CCCceEEECCCCEEeccccccCCceEEEEEccCCCCceEEEEECCCHHHHHHHHHHHHHh
Confidence 123466888899988764334678999888774 88999999999999999999876
No 79
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.28 E-value=3.8e-11 Score=105.68 Aligned_cols=100 Identities=20% Similarity=0.251 Sum_probs=70.6
Q ss_pred CceeeeEEEeccCC-CCCCCceeEEEEEecC-----ceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCC
Q 006276 291 VQTIRQGYLSKRSS-NLRGDWKRRFFVLDSR-----GMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHG 364 (652)
Q Consensus 291 ~~~~k~G~L~K~~~-~~~~~WkrR~f~L~~~-----g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 364 (652)
..++|+|||+++.- .+++.|+||||+|... ..|=||..+.+...|
T Consensus 10 e~~vk~G~L~~q~q~~fgkKWrk~w~vLy~~S~~GvaRLE~yd~~ek~~r~----------------------------- 60 (127)
T 2d9w_A 10 DGAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEKPRRC----------------------------- 60 (127)
T ss_dssp CCSSEEEEEEECBCSSSSCBCCEEEEEEECCSSSSCCEEEEECCCSCSSSC-----------------------------
T ss_pred CccccceEEEecccchhhhhhheeEEEEecCCCCCceeeeeeeccCccccC-----------------------------
Confidence 35789999999974 5667899999999754 346677665442111
Q ss_pred CCCCccccccceeecccceeeeCCCCC----CCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHH
Q 006276 365 GVHDEKSAARHTVNLLTSTIKVDADQS----DLRFCFRIISPTKNYTLQAESALDQMDWIEKITGV 426 (652)
Q Consensus 365 ~~~~~~~~~~~~i~l~~~~vk~~~~~~----~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~a 426 (652)
..++..|.|..|..-.+.+.+ ...++|.|.|++++|+|.|+++ |+.+||.+|...
T Consensus 61 ------~~~rrVIrLsdCisV~~~~~e~~~pk~~~aF~l~T~er~~~laAe~~-E~~~Wi~~ic~~ 119 (127)
T 2d9w_A 61 ------EAARKVIRLSDCLRVAEAGGEASSPRDTSAFFLETKERLYLLAAPAA-ERGDWVQAICLL 119 (127)
T ss_dssp ------SCCEEEECGGGEEEEEECCSCSSSCSSCEEEEEEESSCEEEEEECHH-HHHHHHHHHHHH
T ss_pred ------CCCceEEEhhhCCeEecccCccCCCCcceEEEEEeCCcEEEEEeCcH-HHHHHHHHHHHH
Confidence 123355666655322222222 3458999999999999999975 899999999877
No 80
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=99.27 E-value=6.6e-10 Score=112.58 Aligned_cols=194 Identities=13% Similarity=0.098 Sum_probs=151.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHhhCCCCCCCccccCchhHHHHHHHHHHHHHHHHHH
Q 006276 16 IQGLEESAEVLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALETFGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVL 95 (652)
Q Consensus 16 v~~~E~~le~l~~~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f~~~~~d~~~~~~~g~~L~~f~~~lkel~~~~~~l 95 (652)
....+..+..++.+++++.+.++.|.+.+..+..++..|+.++..+....... +..+..++..+..++ ..+
T Consensus 54 Fe~~~~~f~~~e~~~~~l~k~~k~y~~~~~~~~~~~~~l~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~---~d~ 124 (251)
T 2fic_A 54 FEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEPDWPG------RDEANKIAENNDLLW---MDY 124 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSTT------HHHHHHHHHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCC------chhHHHHHHHHHHHH---HHH
Confidence 45678888999999999999999999998888777888999887764321111 124555555554322 334
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCC--ChhhHhHHHHHHHHHHHHHHHHHHHHH
Q 006276 96 RSQVEHMLNDRLLQYVNIDLHEVKEARKCFDKASLLYDQAREKFLSLRKGT--KTDVAAILEEELHSARSAFEQARFSLV 173 (652)
Q Consensus 96 ~~~~~~~i~~pL~~f~~~di~~~ke~Rk~Fek~~~~YD~al~ky~s~~K~k--~~~~~~E~~~eL~~~Rk~f~~aslDyv 173 (652)
...+...++.||..|+ ..++.++...++-+..+.+||.+..++.++.+++ ++..+..++.+|..++..|....-++.
T Consensus 125 ~~~l~~~vi~Pl~~~~-~~~~~i~~~ikKR~~k~lDyD~~~~~l~kl~~k~~kd~~kl~kae~el~~ak~~ye~ln~~L~ 203 (251)
T 2fic_A 125 HQKLVDQALLTMDTYL-GQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQ 203 (251)
T ss_dssp HHHHHHHTHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456678999999999 5699999999999999999999999987765443 455677889999999999999999999
Q ss_pred HHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 006276 174 TALSNVEAKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQV 219 (652)
Q Consensus 174 ~~l~~l~~~k~~e~le~l~~~~~aq~~ff~~g~e~~~~l~~~l~el 219 (652)
..|..+.....--+...+..|+.+|..||.++.+.+.+|.+.++.+
T Consensus 204 ~eLp~l~~~~~~~~~~~l~~f~~~Q~~f~~~~~~~~~~L~~~l~~~ 249 (251)
T 2fic_A 204 EELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVGL 249 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999998776544556899999999999999999999998877654
No 81
>1uru_A Amphiphysin; endocytosis, coiled-coil, membrane curvature; 2.6A {Drosophila melanogaster} SCOP: a.238.1.1
Probab=99.18 E-value=5.4e-09 Score=105.17 Aligned_cols=197 Identities=11% Similarity=0.100 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHhhCCCCCCCccccCchhHHHHHHHHHHHHHHHHH
Q 006276 15 QIQGLEESAEVLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALETFGGGHNDPISVAFGGPVMTKFTIALREIGTYKEV 94 (652)
Q Consensus 15 sv~~~E~~le~l~~~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f~~~~~d~~~~~~~g~~L~~f~~~lkel~~~~~~ 94 (652)
-....+.++..++.++.++.+.++.|..++..+..++..|++++..+....... ...+..+... +......
T Consensus 38 ~fe~~~~~f~~~e~~~~~l~k~~~~y~~~~~~~~~~~~~l~~~~~~l~~~~~~~------~~~~~~~~~~---~~~~~~~ 108 (244)
T 1uru_A 38 IFDDHLNNFNRQQASANRLQKEFNNYIRCVRAAQAASKTLMDSVCEIYEPQWSG------YDALQAQTGA---SESLWAD 108 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSTT------HHHHHHHHHH---HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC------chHHHHHHHH---HHHHHHH
Confidence 456788899999999999999999999988877777788888888765421111 1133444443 3334445
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcccc----CCChhhHhHHHHHHHHHHHHHHHHHH
Q 006276 95 LRSQVEHMLNDRLLQYVNIDLHEVKEARKCFDKASLLYDQAREKFLSLRK----GTKTDVAAILEEELHSARSAFEQARF 170 (652)
Q Consensus 95 l~~~~~~~i~~pL~~f~~~di~~~ke~Rk~Fek~~~~YD~al~ky~s~~K----~k~~~~~~E~~~eL~~~Rk~f~~asl 170 (652)
+...+...++.||..|+ .+++.++...++-+....+||.+..++..+.. .++...+..++.++..++..|....-
T Consensus 109 ~~~~~~~~vi~Pl~~~~-~~~~~i~~~ikKR~~k~lDyD~~~~~l~kl~~k~~k~kd~~kl~~ae~el~~ak~~ye~ln~ 187 (244)
T 1uru_A 109 FAHKLGDQVLIPLNTYT-GQFPEMKKKVEKRNRKLIDYDGQRHSFQNLQANANKRKDDVKLTKGREQLEEARRTYEILNT 187 (244)
T ss_dssp HHHHHHTTTHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCBTTBCCTTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777788999999999 47999999999999999999999988876552 34455677788899999999999998
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 006276 171 SLVTALSNVEAKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLT 221 (652)
Q Consensus 171 Dyv~~l~~l~~~k~~e~le~l~~~~~aq~~ff~~g~e~~~~l~~~l~el~~ 221 (652)
.+...|..+...+.-.+...+..|+.+|..||.++.+.+..+.+.++.+..
T Consensus 188 ~L~~eLp~l~~~~~~~~~~~l~~fv~~q~~~~~~~~~~~~~l~~~~~~l~~ 238 (244)
T 1uru_A 188 ELHDELPALYDSRILFLVTNLQTLFATEQVFHNETAKIYSELEAIVDKLAT 238 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999877666677888999999999999999998888777766654
No 82
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.09 E-value=1.3e-10 Score=127.46 Aligned_cols=102 Identities=18% Similarity=0.364 Sum_probs=68.7
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 371 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (652)
.++|+|||.|++ ...+.|+||||+|++++.|+||+++..... .|.+
T Consensus 5 ~v~keG~L~K~g-~~~k~Wk~r~fvL~~~~~l~yyk~~~~~~~----------------------------~~~i----- 50 (446)
T 4ejn_A 5 AIVKEGWLHKRG-EYIKTWRPRYFLLKNDGTFIGYKERPQDVD----------------------------QREA----- 50 (446)
T ss_dssp CEEEEEEEEEEE-TTTTEEEEEEEEEETTSBEEEESSCC-----------------------------------C-----
T ss_pred eEEEEeeEEeec-cccccccceEEEEeeCCEEEEEecCCCCCc----------------------------cCcc-----
Confidence 589999999995 455899999999986777778876643210 0100
Q ss_pred cccceeecccceeeeCCCCCCCcccEEEEeCCe-eE---EEEeCCHHHHHHHHHHHHHHHHHh
Q 006276 372 AARHTVNLLTSTIKVDADQSDLRFCFRIISPTK-NY---TLQAESALDQMDWIEKITGVIASL 430 (652)
Q Consensus 372 ~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~r-~~---~lqA~se~e~~~Wi~ai~~ai~~~ 430 (652)
+...+.+..|.+.. ....+++||+|.+++. ++ .|++++++++++|+.||+.+|..+
T Consensus 51 -~l~~~~~~~~~~~~--~~~~~~~~f~I~~~~~~~~~~r~~~~~~~ee~e~W~~ai~~~i~~~ 110 (446)
T 4ejn_A 51 -PLNNFSVAQCQLMK--TERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGL 110 (446)
T ss_dssp -CCGGGBCTTCEEEE--ECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHCCC-
T ss_pred -cccCccccceeecC--CCCCCCceeEEEcCCCceeeeeEEecCCHHHHHHHHHHHHhhhhhh
Confidence 01112223344432 1245689999998763 33 799999999999999999997644
No 83
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=99.06 E-value=3.4e-10 Score=114.03 Aligned_cols=101 Identities=19% Similarity=0.232 Sum_probs=65.8
Q ss_pred CCceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCc
Q 006276 290 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 369 (652)
Q Consensus 290 ~~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 369 (652)
...+..+|||+++..+ .+.|+||||+|+++|+ ||+++......+ ++
T Consensus 129 s~~P~~~G~L~~ke~~-~K~WkkRyfvLr~sgL-y~~~k~~sk~~r----------------~l---------------- 174 (256)
T 3hk0_A 129 SSSPEIQGFLHVKELG-KKSWKKLYVCLRRSGL-YCSTKGTSAAPR----------------HL---------------- 174 (256)
T ss_dssp TSCEEEEEEEEEECTT-SSCEEEEEEEEETTEE-EEESSTTCCCGG----------------GE----------------
T ss_pred CCCCcceeEEEEecCC-CCcceEEEEEEeCCEE-EEEecCCCCccc----------------cc----------------
Confidence 3467899999999644 4899999999997776 555544321000 00
Q ss_pred cccccceeecccceeeeCCC-----CCCCcccEEEEeCCe------eEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 370 KSAARHTVNLLTSTIKVDAD-----QSDLRFCFRIISPTK------NYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 370 ~~~~~~~i~l~~~~vk~~~~-----~~~rrfcF~I~t~~r------~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
...+.+....|-...+ ....+|||.|.++.. .++|+|++++++..||.||+.|+.
T Consensus 175 ----~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak~ 240 (256)
T 3hk0_A 175 ----QLLADLEDSNIFSLIAGRKQYNAPTDHGLCIKPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLKY 240 (256)
T ss_dssp ----EEEECCTTEEEEEESSTHHHHCCSSSEEEEEEETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred ----eEEEEcCCCEEEEecccccccCCCCCCEEEEEcccccCCCceEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 0001222222221110 112379999997643 599999999999999999999974
No 84
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=99.04 E-value=9.1e-09 Score=112.45 Aligned_cols=100 Identities=15% Similarity=0.291 Sum_probs=64.3
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 371 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (652)
..+++|.|.+.++ +.++.|||+|.++-+++..+.... ..
T Consensus 243 ~li~~g~l~~~~~---~~~~~r~~fLF~d~Ll~~k~~~~~--------------------------------------~y 281 (434)
T 3mpx_A 243 EFLKEGTLMKVTG---KNRRPRHLFLMNDVLLYTYPQKDG--------------------------------------KY 281 (434)
T ss_dssp CEEECCEEEEEET---TEEEEEEEEEESSEEEEEEECTTS--------------------------------------CE
T ss_pred ceEecceEEEEeC---CCceEEEEEEECCEEEEEEecCCC--------------------------------------eE
Confidence 4689999987743 358899999997766665433211 01
Q ss_pred cccceeecccceeeeCCCCCCCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHHHHHhhcc
Q 006276 372 AARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSS 433 (652)
Q Consensus 372 ~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~ai~~~l~~ 433 (652)
.....+.+....+.. .+..+.+|+|.|.++.++|+|+|.|++|++.||.+|+.+|......
T Consensus 282 ~~k~~i~L~~l~v~~-~~~~~~~~~f~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~e~~~~ 342 (434)
T 3mpx_A 282 RLKNTLAVANMKVSR-PVMEKVPYALKIETSESCLMLSASSCAERDEWYGCLSRALPEDYKA 342 (434)
T ss_dssp EEEEEEEC-----CC-CCCTTSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHC-------
T ss_pred EEEEEEEcCCcEEEe-cCCCCCCeeEEEecCCeEEEEecCCHHHHHHHHHHHHHHHHHHHhh
Confidence 112334444444432 2334568999999999999999999999999999999999866543
No 85
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=99.03 E-value=8.2e-10 Score=112.57 Aligned_cols=100 Identities=19% Similarity=0.300 Sum_probs=63.2
Q ss_pred CceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCcc
Q 006276 291 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 370 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (652)
..+.++|||++++.+. +.|+||||+|+++|++| +++....... ++
T Consensus 156 ~~pe~~G~L~~k~~~~-k~WkkRyfvLr~sgLyy-~~K~~sk~~r----------------~l----------------- 200 (281)
T 4gmv_A 156 TVPEIEGVLWLKDDGK-KSWKKRYFLLRASGIYY-VPKGKAKVSR----------------DL----------------- 200 (281)
T ss_dssp CCCCCEEEEEEECTTS-SCEEEEEEEECSSCEEE-C-------------------------CC-----------------
T ss_pred CCCccEEEEEEECCCC-CCCeEEEEEEeCCEEEE-EeCCCCCccc----------------cc-----------------
Confidence 4577999999996443 89999999999878654 4443211000 00
Q ss_pred ccccceeecccceeeeCC-----CCCCCcccEEEEeCC------eeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 371 SAARHTVNLLTSTIKVDA-----DQSDLRFCFRIISPT------KNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 371 ~~~~~~i~l~~~~vk~~~-----~~~~rrfcF~I~t~~------r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
...+.|..+.|-... -....+|||.|.++. ..++|+|++++++..||.||+-++-
T Consensus 201 ---~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik~~~~~~~~~~~~~~caede~~~~~Wv~Air~ak~ 266 (281)
T 4gmv_A 201 ---VCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKY 266 (281)
T ss_dssp ---EEEECGGGCEEEEESSHHHHTCCSCSCEEEEECTTCCSCCTTCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ---eEEEEcCCcEEEEecccccccCCCCCcEEEEecCccCCCCCceEEEEeCCHHHHHHHHHHHHHHhh
Confidence 001122222222110 012458999999864 3699999999999999999998864
No 86
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=98.94 E-value=5e-09 Score=95.78 Aligned_cols=95 Identities=20% Similarity=0.257 Sum_probs=69.6
Q ss_pred CCceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCc
Q 006276 290 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 369 (652)
Q Consensus 290 ~~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 369 (652)
.+.++++|||.|+.+ . .|++|||+|.+...|||......
T Consensus 49 ge~Ilk~G~v~KrkG-l--~~kkR~liLT~~PrL~Yvdp~~~-------------------------------------- 87 (151)
T 1w1g_A 49 NNLILKMGPVDKRKG-L--FARRRQLLLTEGPHLYYVDPVNK-------------------------------------- 87 (151)
T ss_dssp TCCEEEEEEEEEEET-T--EEEEEEEEEETTTEEEEEETTTT--------------------------------------
T ss_pred CCcEEEEEEEEeccc-C--cceeEEEEEcCCceEEEEcCccc--------------------------------------
Confidence 457899999999854 2 49999999997777766543322
Q ss_pred cccccceeeccc-ceeeeCCCCCCCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHHHHHhhcc
Q 006276 370 KSAARHTVNLLT-STIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSS 433 (652)
Q Consensus 370 ~~~~~~~i~l~~-~~vk~~~~~~~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~ai~~~l~~ 433 (652)
...+.|.+.. ++|.+.. ..+|.|.+|+|+|+|.|. ..++++|+.||+.++...+..
T Consensus 88 --~~KGeIpls~~l~ve~k~-----~~~F~I~Tp~RtY~~~d~-~~~AqeWv~aI~~~~~~~~~~ 144 (151)
T 1w1g_A 88 --VLKGEIPWSQELRPEAKN-----FKTFFVHTPNRTYYLMDP-SGNAHKWCRKIQEVWRQRYQS 144 (151)
T ss_dssp --EEEEEECCCTTCEEEESS-----SSEEEEEETTEEEEEECT-TSCHHHHHHHHHHHHHHHHCC
T ss_pred --cccceEecCCCeeEEEcC-----CCEEEEECCCceEEEEcC-ccCHHHHHHHHHHHHHHHhcc
Confidence 1223344433 3344322 238999999999999996 899999999999999887765
No 87
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=98.91 E-value=5.3e-09 Score=96.15 Aligned_cols=97 Identities=13% Similarity=0.241 Sum_probs=73.8
Q ss_pred ceeeeEEEeccC--CCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCc
Q 006276 292 QTIRQGYLSKRS--SNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 369 (652)
Q Consensus 292 ~~~k~G~L~K~~--~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 369 (652)
.|...+||.... +-..+.||||||+++ ++.|+||+++....
T Consensus 46 iPeL~dyLk~~~pk~~tLKgyKryWFv~k-d~~LsyYKskEe~~------------------------------------ 88 (173)
T 4f7h_A 46 IPELADYIKVFKPKKLTLKGYKQYWCTFK-DTSISCYKSKEESS------------------------------------ 88 (173)
T ss_dssp TTCEEEEEEEECCBTTBCCCCEEEEEEEE-TTEEEEESCGGGCS------------------------------------
T ss_pred ChhhHhHHHhhcchhcccccceeEEEEEe-CCEEEEEcCHhHhc------------------------------------
Confidence 456789995432 234589999999999 67899998876521
Q ss_pred cccccceeecccceeeeCCCCCCCcccEEEEeC---C-eeEEEEeCCHHHHHHHHHHHHHH
Q 006276 370 KSAARHTVNLLTSTIKVDADQSDLRFCFRIISP---T-KNYTLQAESALDQMDWIEKITGV 426 (652)
Q Consensus 370 ~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~---~-r~~~lqA~se~e~~~Wi~ai~~a 426 (652)
..+.+.|+|.+|.|.++..-...+|++.+..| + ..++|.|+||.++..||.|.+-|
T Consensus 89 -geP~~~I~LrGCEVtpDVnva~~Kf~IkL~vP~~~gm~e~~Lrcd~E~qya~WMAAcrLA 148 (173)
T 4f7h_A 89 -GTPAHQMNLRGCEVTPDVNISGQKFNIKLLIPVAEGMNEIWLRCDNEKQYAHWMAACRLA 148 (173)
T ss_dssp -SCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred -CCCceEEecCceEEeccccccccceeEEEeccCCCCcceeeeecCCHHHHHHHHHHhhhh
Confidence 12356789999999876444556788887765 2 56999999999999999998776
No 88
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=98.91 E-value=4.9e-09 Score=95.29 Aligned_cols=97 Identities=15% Similarity=0.247 Sum_probs=71.6
Q ss_pred ceeeeEEEeccC--CCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCc
Q 006276 292 QTIRQGYLSKRS--SNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 369 (652)
Q Consensus 292 ~~~k~G~L~K~~--~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 369 (652)
.|...|||.... +-..+.||||||+++ ++.|+||+++.+..
T Consensus 25 iPeL~dyLk~~~pkrltLKgfKryWfv~k-Dt~LsyYKSkEe~~------------------------------------ 67 (165)
T 4bbk_A 25 IPKLADYLKLFRPKKLMLKACKQYWFVFK-DTSIAYFKNKELEQ------------------------------------ 67 (165)
T ss_dssp -CCEEEEEEEEC-------CCEEEEEEEE-TTEEEEESSGGGTT------------------------------------
T ss_pred ChhhHhHHHhhcccccccccceeEEEEEe-CCEEEEEcCHHHhc------------------------------------
Confidence 456789996432 224589999999999 78899998876521
Q ss_pred cccccceeecccceeeeCCCCCCCcccEEEEeC---C-eeEEEEeCCHHHHHHHHHHHHHH
Q 006276 370 KSAARHTVNLLTSTIKVDADQSDLRFCFRIISP---T-KNYTLQAESALDQMDWIEKITGV 426 (652)
Q Consensus 370 ~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~---~-r~~~lqA~se~e~~~Wi~ai~~a 426 (652)
..+.+.|+|.+|.|.++..-...+|+|.|..| + ..++|.|+||.++..||.|.+-|
T Consensus 68 -geP~~~inLrGCEVtPDVnva~~Kf~ikL~ip~~~gm~e~~LrcdsE~QYa~WMAAcrLA 127 (165)
T 4bbk_A 68 -GEPIEKLNLRGCEIVPDVNVSGRKFGIKLLIPVADGMNEVYLRCDHEDQYARWMAACILA 127 (165)
T ss_dssp -SCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred -CCCceEEecCccEEecccccccceeeEEEecCCCCcceeeeeecCCHHHHHHHHHHhhhc
Confidence 12346789999999875444456899998766 2 46999999999999999998776
No 89
>4avm_A Bridging integrator 2; protein binding, plasma membrane, BAR adaptor; 1.91A {Homo sapiens}
Probab=98.84 E-value=8e-07 Score=88.93 Aligned_cols=195 Identities=14% Similarity=0.163 Sum_probs=147.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHhhCCCCCCCccccCchhHHHHHHHHHHHHHHHHHH
Q 006276 16 IQGLEESAEVLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALETFGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVL 95 (652)
Q Consensus 16 v~~~E~~le~l~~~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f~~~~~d~~~~~~~g~~L~~f~~~lkel~~~~~~l 95 (652)
.+..|.....++..+.++.+.++.|.+++..+..++..|++++..+.....+. ...+....+.+......+
T Consensus 35 Fe~~e~rF~~le~~~~kL~k~~k~y~~ai~~~~~~q~~~~~~l~~~y~~~~~~---------~~~~~~~~~~~~~l~~~~ 105 (237)
T 4avm_A 35 FEQSASNFYQQQAEGHKLYKDLKNFLSAVKVMHESSKRVSETLQEIYSSEWDG---------HEELKAIVWNNDLLWEDY 105 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSTT---------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCc---------HHHHHHHHHHHHHHHHHH
Confidence 45677788888999999999999999998888888899999998876532111 122222222222223334
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccc--cCCChhhHhHHHHHHHHHHHHHHHHHHHHH
Q 006276 96 RSQVEHMLNDRLLQYVNIDLHEVKEARKCFDKASLLYDQAREKFLSLR--KGTKTDVAAILEEELHSARSAFEQARFSLV 173 (652)
Q Consensus 96 ~~~~~~~i~~pL~~f~~~di~~~ke~Rk~Fek~~~~YD~al~ky~s~~--K~k~~~~~~E~~~eL~~~Rk~f~~aslDyv 173 (652)
...++..++.||..|+.. +.+++..-++=+....+||.+..++.++. +.+++.++..++.++..++..|...--.+.
T Consensus 106 ~~~l~~~vi~Pl~~~~~~-~~~i~k~I~KR~~kllDyd~~~~~~~kl~~k~~kd~~kl~kae~el~~a~~~ye~lN~~L~ 184 (237)
T 4avm_A 106 EEKLADQAVRTMEIYVAQ-FSEIKERIAKRGRKLVDYDSARHHLEAVQNAKKKDEAKTAKAEEEFNKAQTVFEDLNQELL 184 (237)
T ss_dssp HHHHCCCCCHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555679999999977 88888877778888899999999986653 445666788888999999999999999999
Q ss_pred HHHHHHhhhhhhhHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 006276 174 TALSNVEAKKRFEFLEA-VSGTMDAHLRYFKQGYELLHQMEPYINQVLT 221 (652)
Q Consensus 174 ~~l~~l~~~k~~e~le~-l~~~~~aq~~ff~~g~e~~~~l~~~l~el~~ 221 (652)
..|..+-... +.++.+ +-.|+..|..||......+..|.+.+..+..
T Consensus 185 ~eLP~l~~~~-~~~~~~~~~~~i~~q~~f~~~~~~~~~~l~~~~~~~~~ 232 (237)
T 4avm_A 185 EELPILYNSR-IGCYVTIFQNISNLRDVFYREMSKLNHNLYEVMSKLER 232 (237)
T ss_dssp HHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 9999886554 456655 6789999999999988888888777776654
No 90
>4a3a_A Amphiphysin; structural genomics, invagination, knobs-IN-holes, curvature membrane, structural genomics consortium; 1.78A {Homo sapiens} PDB: 4atm_A 3sog_A
Probab=98.76 E-value=6.3e-06 Score=82.62 Aligned_cols=195 Identities=12% Similarity=0.129 Sum_probs=141.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHhhCCCCCCCccccCchhHHHHHHHHHHHHHHHHHH
Q 006276 16 IQGLEESAEVLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALETFGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVL 95 (652)
Q Consensus 16 v~~~E~~le~l~~~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f~~~~~d~~~~~~~g~~L~~f~~~lkel~~~~~~l 95 (652)
.+..|.....++..+.+|.|.++.|.+++..+..++..|++++..+....... ...+..+.....+++. .+
T Consensus 40 F~~~e~~F~~le~~~~kL~k~~k~y~~ai~~~~~~q~~~ae~l~~ly~p~~~~------~~~~~~~~~~~~~l~~---d~ 110 (243)
T 4a3a_A 40 FEEYVQNFKRQEAEGTRLQRELRGYLAAIKGMQEASMKLTESLHEVYEPDWYG------REDVKMVGEKCDVLWE---DF 110 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSTT------HHHHHHHHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccC------ccchHHHHHHHHHHHH---HH
Confidence 45566677778888999999999999998888888888999998875432110 0012223333333222 22
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccc--cCCChhhHhHHHHHHHHHHHHHHHHHHHHH
Q 006276 96 RSQVEHMLNDRLLQYVNIDLHEVKEARKCFDKASLLYDQAREKFLSLR--KGTKTDVAAILEEELHSARSAFEQARFSLV 173 (652)
Q Consensus 96 ~~~~~~~i~~pL~~f~~~di~~~ke~Rk~Fek~~~~YD~al~ky~s~~--K~k~~~~~~E~~~eL~~~Rk~f~~aslDyv 173 (652)
...+...++.||..|+.. +.+++..=++=+....+||.+..++.++. +++++.++..++.++..++..|...--.+.
T Consensus 111 ~~~l~d~~l~Pl~~l~~~-f~~i~k~I~KR~~KllDYD~~~~k~~kL~~K~~kd~~kl~kae~el~~Ak~~Ye~lN~~L~ 189 (243)
T 4a3a_A 111 HQKLVDGSLLTLDTYLGQ-FPDIKNRIAKRSRKLVDYDSARHHLEALQSSKRKDESRISKAEEEFQKAQKVFEEFNVDLQ 189 (243)
T ss_dssp HHHHHHTHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-ChHHHHHHHHhcchHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223345667899999887 77777666666677888999999986553 445677788889999999999999999999
Q ss_pred HHHHHHhhhhhhhHHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 006276 174 TALSNVEAKKRFEFLE-AVSGTMDAHLRYFKQGYELLHQMEPYINQVLT 221 (652)
Q Consensus 174 ~~l~~l~~~k~~e~le-~l~~~~~aq~~ff~~g~e~~~~l~~~l~el~~ 221 (652)
..|..+-... +.|+. .+-.|+..|..||.....+..++.+-++.+..
T Consensus 190 eELP~l~~~r-~~~~~~~~~s~i~~Q~~f~~e~~k~~~~l~~~~~~~~~ 237 (243)
T 4a3a_A 190 EELPSLWSRR-VGFYVNTFKNVSSLEAKFHKEIAVLCHKLYEVMTKLGD 237 (243)
T ss_dssp HHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHh
Confidence 9999886553 45555 46799999999999999888887777665543
No 91
>1i4d_A Arfaptin 2, partner of RAC1; coiled coil, G-protein, complex, signaling protein; HET: GDP; 2.50A {Homo sapiens} SCOP: a.238.1.2 PDB: 1i49_A* 1i4l_A* 1i4t_A*
Probab=98.70 E-value=2.9e-06 Score=82.98 Aligned_cols=187 Identities=19% Similarity=0.160 Sum_probs=149.0
Q ss_pred HHHHHHHHHHH---HHHHHHHHHHHHhhhhhcccchHHHHHHHHHHhhCCCCCCCccccCchhHHHHHHHHHHHHHHHHH
Q 006276 18 GLEESAEVLRE---RSLKFYKGCRKYTEGLGEGYDGDIAFASALETFGGGHNDPISVAFGGPVMTKFTIALREIGTYKEV 94 (652)
Q Consensus 18 ~~E~~le~l~~---~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f~~~~~d~~~~~~~g~~L~~f~~~lkel~~~~~~ 94 (652)
.+|.+|+.|+. .+..+++.++.|...+-.+...+..|.+.|..++.- ++. .+..+..|+++++-+......
T Consensus 8 EL~~klE~l~~~q~~Y~~L~~~~~~l~~~~~~l~qtq~~lG~~f~~l~~~--~p~----l~~~f~~~~~~~r~~~k~g~~ 81 (224)
T 1i4d_A 8 ELELQIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQK--SPE----LQEEFGYNAETQKLLCKNGET 81 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--CGG----GHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CcH----HHHHHHHHHHHHHHHHHhHHH
Confidence 45566665554 688899999999888877777789999999887753 222 245899999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccC---CCh-hhHhHHHHHHHHHHHHHHHHHH
Q 006276 95 LRSQVEHMLNDRLLQYVNIDLHEVKEARKCFDKASLLYDQAREKFLSLRKG---TKT-DVAAILEEELHSARSAFEQARF 170 (652)
Q Consensus 95 l~~~~~~~i~~pL~~f~~~di~~~ke~Rk~Fek~~~~YD~al~ky~s~~K~---k~~-~~~~E~~~eL~~~Rk~f~~asl 170 (652)
|+..+.. ++.-|..|+...|..-...=++|+.++.+||+++...-.++-. .++ ..++.+..+...+|..|.+...
T Consensus 82 Ll~~L~~-f~s~l~T~~~kaI~DT~lTIk~ye~aR~EY~ay~~~~ee~~~~~~~~~~l~rve~~q~~~~~ak~kf~kLR~ 160 (224)
T 1i4d_A 82 LLGAVNF-FVSSINTLVTKTMEDTLMTVKQYEAARLEYDAYRTDLEELSLGPRDAGTRGRLESAQATFQAHRDKYEKLRG 160 (224)
T ss_dssp HHHHHHH-HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHHHHhHhccHHHHHHHHHHHHhHhHHHHHhhHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 8866554 4778999999999999999999999999999999877554422 111 2345677789999999999999
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006276 171 SLVTALSNVEAKKRFEFLEAVSGTMDAHLRYFKQGYELLHQ 211 (652)
Q Consensus 171 Dyv~~l~~l~~~k~~e~le~l~~~~~aq~~ff~~g~e~~~~ 211 (652)
|.+.+|..|..++--.+--+|+.|..+...||....+.++.
T Consensus 161 DV~~KleLLd~~r~kv~~~qL~~~~~al~~y~~~~~~~l~~ 201 (224)
T 1i4d_A 161 DVAIKLKFLEENKIKVMHKQLLLFHNAVSAYFAGNQKQLEQ 201 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999999988877788889999999999999988887754
No 92
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.64 E-value=8.1e-08 Score=84.48 Aligned_cols=103 Identities=16% Similarity=0.283 Sum_probs=62.2
Q ss_pred CCceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCc
Q 006276 290 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 369 (652)
Q Consensus 290 ~~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 369 (652)
...++|+||+.+.+ ...+.|||+|+.|+...+- +|.++.... +....+.+
T Consensus 5 ~s~vlkeGW~VH~t-~~d~~rKRHYWrLD~K~It-lf~~e~~~~-----------------------~ykeIpL~----- 54 (125)
T 2coa_A 5 SSGTLREGWVVHYS-NKDTLRKRHYWRLDCKCIT-LFQNNTTNR-----------------------YYKEIPLS----- 54 (125)
T ss_dssp CCSCSEEEEEEECC-SSSCCCEEEEEEECSSEEE-EESSSSCSS-----------------------CSEEEETT-----
T ss_pred CCceeecceEEEEc-cCCccccceeeEecCCeEE-EEecCCCCc-----------------------eeeeeehh-----
Confidence 34689999999885 4458899999999965554 455443210 00000000
Q ss_pred cccccceeecccceeeeCCCCCCCcccEEEEeCCeeEEEEeC---C--------HHHHHHHHHHHHHHH
Q 006276 370 KSAARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAE---S--------ALDQMDWIEKITGVI 427 (652)
Q Consensus 370 ~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~r~~~lqA~---s--------e~e~~~Wi~ai~~ai 427 (652)
+-+.+..|..........+.+||||+|.+.+|+.+++ . .+.+..|..||++|+
T Consensus 55 -----eIl~v~~~~~~~~l~~~~~~hcFEi~T~~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqAL 118 (125)
T 2coa_A 55 -----EILTVESAQNFSLVPPGTNPHCFEIVTANATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQAL 118 (125)
T ss_dssp -----TCCEEEESCCCSSSCTTSCCEEEEEECSSCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHG
T ss_pred -----HeecccccccccccCCCCCCceEEEEeCCeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhc
Confidence 0011111111110012236799999999999999984 1 256999999998885
No 93
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.58 E-value=4.3e-07 Score=80.11 Aligned_cols=102 Identities=17% Similarity=0.294 Sum_probs=63.3
Q ss_pred CceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCC-CCCCCCCCcccccCcccccccccccccccccCCCCCCc
Q 006276 291 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCS-KSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDE 369 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 369 (652)
..++|+||+.+.+. ..+.|||+|+.|+...+-+| .++.. +. ..-.+.++|
T Consensus 6 s~vlkeGWmVH~t~-~d~~rKRHYWrLD~K~Itlf-~~e~~~k~------------------------ykeIpLseI--- 56 (129)
T 2d9z_A 6 SGMVKEGWMVHYTS-RDNLRKRHYWRLDSKCLTLF-QNESGSKY------------------------YKEIPLSEI--- 56 (129)
T ss_dssp TTSEEEEEEEEEES-SCCCCEEEEEEEESSCEEEE-SCSSCCSC------------------------CCEECTTTC---
T ss_pred CceeecceEEEEcc-CCccccceeeEecCCeEEEE-ecCCCCce------------------------eceeeHHHh---
Confidence 46899999998854 34789999999997666554 44321 10 000000000
Q ss_pred cccccceeecccceeeeCCCCCCCcccEEEEeCCeeEEEEeCC---------------HHHHHHHHHHHHHHHH
Q 006276 370 KSAARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAES---------------ALDQMDWIEKITGVIA 428 (652)
Q Consensus 370 ~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~r~~~lqA~s---------------e~e~~~Wi~ai~~ai~ 428 (652)
+.+..+...........++||||.|.+.+|+.+++. .+.++.|..||++|+.
T Consensus 57 -------L~v~~~~~~~~~~~~~~phcFEi~T~~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALm 123 (129)
T 2d9z_A 57 -------LRISSPRDFTNISQGSNPHCFEIITDTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALM 123 (129)
T ss_dssp -------CEECCTTCCCCSSSCSCCCSEEEECSSCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHH
T ss_pred -------cccccccCccccCCCCCCceEEEEECCEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhcc
Confidence 111111111000122346999999999999999854 6899999999999874
No 94
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=98.57 E-value=1e-05 Score=87.34 Aligned_cols=100 Identities=19% Similarity=0.290 Sum_probs=65.6
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 371 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (652)
..+++|.|.+.... .+.++.||++|.++-+++..++. .. .
T Consensus 233 rli~~G~l~~~~~~-~~~~~~~~~fLF~d~Ll~~k~k~-~~--------------------------------------y 272 (406)
T 2vrw_B 233 RPKIDGELKITSVE-RRSKTDRYAFLLDKALLICKRRG-DS--------------------------------------Y 272 (406)
T ss_dssp SEEEEEEEEEECSS-CCSCEEEEEEEESSEEEEEEEET-TE--------------------------------------E
T ss_pred cccccccEEEEecC-CCccceEEEEecCCEEEEEEecC-Cc--------------------------------------e
Confidence 36889999877432 25689999999977666654321 10 0
Q ss_pred cccceeecccceeeeCCCC----CCCcccEEEEe--CCeeEEEEeCCHHHHHHHHHHHHHHHHHhh
Q 006276 372 AARHTVNLLTSTIKVDADQ----SDLRFCFRIIS--PTKNYTLQAESALDQMDWIEKITGVIASLL 431 (652)
Q Consensus 372 ~~~~~i~l~~~~vk~~~~~----~~rrfcF~I~t--~~r~~~lqA~se~e~~~Wi~ai~~ai~~~l 431 (652)
.....+.+....|...++. ...++.|.|++ +.+.|+|+|.|++|++.||.+|+.+|..+.
T Consensus 273 ~~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~ 338 (406)
T 2vrw_B 273 DLKASVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNIY 338 (406)
T ss_dssp EEEEEEETTTEEEEC--------CTTCEEEEEEETTCSCEEEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEEecccceeeeecCCCCccCCccceeeEEEecCCCceEEEeCCCHHHHHHHHHHHHHHHhhhh
Confidence 1112333433333322221 12358999997 457899999999999999999999998764
No 95
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=98.47 E-value=1.4e-06 Score=76.78 Aligned_cols=105 Identities=15% Similarity=0.124 Sum_probs=69.7
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 371 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (652)
..+++|.|.+-.....+.=+++||+|-++.+++-.++..+. | . .
T Consensus 7 ~lv~eG~l~el~~~~~k~~~~v~~FLfND~Ll~a~~~~~~~--~-----------------------------~-----~ 50 (113)
T 1zc3_B 7 YLVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRR--G-----------------------------M-----Y 50 (113)
T ss_dssp CEEEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCTT--S-----------------------------C-----E
T ss_pred EEEEeCcEEEEccccCCCCccEEEEecCCEEEEEEEeccCc--c-----------------------------c-----E
Confidence 46789999877543222234689999988888776643321 0 0 0
Q ss_pred cccceeecccceeeeCCCCCCCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHHHHHhhc
Q 006276 372 AARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLS 432 (652)
Q Consensus 372 ~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~ai~~~l~ 432 (652)
.....+.|....|.-.++...-+++|.|.++.++++|+|+|++|+.+||.+|+.+|..++.
T Consensus 51 ~~~~~~~L~~~~v~d~~d~~~~~n~f~i~~~~~s~~~~aes~~eK~~Wl~~~~~a~~~~~~ 111 (113)
T 1zc3_B 51 RYNALYPLDRLAVVNVKDNPPMKDMFKLLMFPESRIFQAENAKIKREWLEVLEETKRALSD 111 (113)
T ss_dssp EEEEEEETTTCEEEEECCBTTBSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcccCEEEECCCCcccceEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHHHHhh
Confidence 0011223332222222344456899999999999999999999999999999999976543
No 96
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=98.45 E-value=9.9e-06 Score=91.84 Aligned_cols=100 Identities=19% Similarity=0.262 Sum_probs=67.2
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 371 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (652)
..+++|.|.+... ..+.++.||++|.++-+++..++ .. ..
T Consensus 405 rll~~G~l~~~~~-~~~~~~~r~~fLF~d~Ll~~k~~-~~--------------------------------------~y 444 (587)
T 3ky9_A 405 RPKIDGELKITSV-ERRSKMDRYAFLLDKALLICKRR-GD--------------------------------------SY 444 (587)
T ss_dssp CEEEEEEEEEECS-SCCSCEEEEEEEETTEEEEEEEE-TT--------------------------------------EE
T ss_pred ceEEEeeEEEEec-cCCCcceEEEEEECCEEEEEEec-CC--------------------------------------EE
Confidence 3689999987643 33678999999997777765433 11 01
Q ss_pred cccceeecccceeeeCCCC----CCCcccEEEEeCC--eeEEEEeCCHHHHHHHHHHHHHHHHHhh
Q 006276 372 AARHTVNLLTSTIKVDADQ----SDLRFCFRIISPT--KNYTLQAESALDQMDWIEKITGVIASLL 431 (652)
Q Consensus 372 ~~~~~i~l~~~~vk~~~~~----~~rrfcF~I~t~~--r~~~lqA~se~e~~~Wi~ai~~ai~~~l 431 (652)
.....+.+....+....+. ..-+++|.|++.. ++|+|+|.|++|++.||.+|+.+|....
T Consensus 445 ~~k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~~~~~~~~L~A~S~eeK~~Wi~~I~~ai~~~~ 510 (587)
T 3ky9_A 445 DLKDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNIY 510 (587)
T ss_dssp EEEEEEEGGGEEEEEC-----CCCTTCEEEEEEETTC---CEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred EeeeeechhhceeeecCCCCcccccccceeEEEEcCCCceEEEEeCCHHHHHHHHHHHHHHhhhhc
Confidence 1123344544444432221 1245889999976 7899999999999999999999998664
No 97
>2ykt_A Brain-specific angiogenesis inhibitor 1-associate protein 2; signaling protein, NPY motif, binding pocket; 2.11A {Homo sapiens} PDB: 1y2o_A 1wdz_A
Probab=98.21 E-value=0.0002 Score=71.78 Aligned_cols=195 Identities=18% Similarity=0.175 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHhhCC-CCCCCccccCchhHHHHHHHHHHHHHHHH
Q 006276 15 QIQGLEESAEVLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALETFGGG-HNDPISVAFGGPVMTKFTIALREIGTYKE 93 (652)
Q Consensus 15 sv~~~E~~le~l~~~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f~~~-~~d~~~~~~~g~~L~~f~~~lkel~~~~~ 93 (652)
+...|-.-++.+-=-+++++..+++|..++..+..+...|.++|..++.. ....-. ...|.+|..++..++.+...++
T Consensus 16 t~~~~~~im~~~~P~~e~li~~~~kY~~al~~~~~a~~~f~dal~kia~~A~~s~gs-~elG~~L~~i~~~~r~ie~~l~ 94 (253)
T 2ykt_A 16 TENVYKTIMEQFNPSLRNFIAMGKNYEKALAGVTYAAKGYFDALVKMGELASESQGS-KELGDVLFQMAEVHRQIQNQLE 94 (253)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSC-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcch-HHHHHHHHHHHHHHHHHHHHHH
Confidence 33344333555666789999999999999888888889999999887641 111111 2346789999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH----HHHHHHHHHHHhccccCC----Ch----hhHhHHHHHHHHH
Q 006276 94 VLRSQVEHMLNDRLLQYVNIDLHEVKEARKCFDKA----SLLYDQAREKFLSLRKGT----KT----DVAAILEEELHSA 161 (652)
Q Consensus 94 ~l~~~~~~~i~~pL~~f~~~di~~~ke~Rk~Fek~----~~~YD~al~ky~s~~K~k----~~----~~~~E~~~eL~~~ 161 (652)
.+...+-..++.||+.=++.|.+.+....|+|.+. ...++.+......+.|+. .+ +...+.-+.+-..
T Consensus 95 ~~~~~~~~~li~pL~~kie~d~K~v~~~~K~~~~e~k~~~~~l~K~~~e~~kl~KK~k~gk~~~~~~~~~~~~~e~v~~~ 174 (253)
T 2ykt_A 95 EMLKSFHNELLTQLEQKVELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNK 174 (253)
T ss_dssp HHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHhhccCCCCcchhHHHHHHHHHHHHHH
Confidence 88888888999999999999999888777766554 445554443333333322 11 2233333344444
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhh-hHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006276 162 RSAFEQARFSLVTALSNVEAKKRF-EFLEAVSGTMDAHLRYFKQGYELLHQ 211 (652)
Q Consensus 162 Rk~f~~aslDyv~~l~~l~~~k~~-e~le~l~~~~~aq~~ff~~g~e~~~~ 211 (652)
++.+++.--+-+... .+++|++| -||+.++.++.....|+.++.+++..
T Consensus 175 ~~~le~~~~~~lr~a-L~EERrRycflv~~~~~v~~~~~~~h~~~~~~L~~ 224 (253)
T 2ykt_A 175 QGELENYVSDGYKTA-LTEERRRFCFLVEKQCAVAKNSAAYHSKGKELLAQ 224 (253)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444443333333322 23344333 56667777777777777676665543
No 98
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=98.04 E-value=0.00037 Score=76.51 Aligned_cols=105 Identities=11% Similarity=0.194 Sum_probs=69.8
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 371 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (652)
..+++|.|.+.... .+.++.|||+|.++-+++..++.... ...
T Consensus 333 ~li~~G~l~~~~~~-~~~~~~r~~fLF~d~Ll~~k~~~~~~------------------------------------~~~ 375 (466)
T 2pz1_A 333 ELIYSGELTRVTQP-QAKSQQRMFFLFDHQLIYCKKDLLRR------------------------------------DVL 375 (466)
T ss_dssp CEEEEEEEEEECTT-TCCEEEEEEEEETTEEEEEEECSSCT------------------------------------TCE
T ss_pred eeEEeeeEEEEecC-CCCeeEEEEEEECCEEEEEEeccccC------------------------------------Cce
Confidence 57899999877542 24678999999977776654332110 001
Q ss_pred cccceeecccceeeeCCCCC------CCcccEEEEeC--CeeEEEEeCCHHHHHHHHHHHHHHHHHhhcc
Q 006276 372 AARHTVNLLTSTIKVDADQS------DLRFCFRIISP--TKNYTLQAESALDQMDWIEKITGVIASLLSS 433 (652)
Q Consensus 372 ~~~~~i~l~~~~vk~~~~~~------~rrfcF~I~t~--~r~~~lqA~se~e~~~Wi~ai~~ai~~~l~~ 433 (652)
.....+.+....|....+.. .-+++|.|..+ ..+|+|+|.|++|++.||.+|+.++..+...
T Consensus 376 ~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~eK~~W~~~i~~a~~~~~~~ 445 (466)
T 2pz1_A 376 YYKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHRGATGDSHLLCTRKPEQKQRWLKAFAREREQVQLD 445 (466)
T ss_dssp EEEEEEETTTCEEEECCSBSCCSSCCCBCEEEEEECSSSCCEEEEEESSHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEeeeeeccceEEEeCCCCcccccccccceeEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHhh
Confidence 11233444444444322222 23589999986 4689999999999999999999999877554
No 99
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.01 E-value=3.3e-05 Score=69.59 Aligned_cols=56 Identities=13% Similarity=0.236 Sum_probs=43.7
Q ss_pred ceeecccceeeeCCCCCCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHHHHHh
Q 006276 375 HTVNLLTSTIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIASL 430 (652)
Q Consensus 375 ~~i~l~~~~vk~~~~~~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~ai~~~ 430 (652)
+.+.+....|....+..+.+|||+|..+. +++.+.|.|.+|++.||.+|+.+|..+
T Consensus 72 gklPL~g~~V~~~ed~~~~~~aFeI~g~~~~~i~v~~~s~eE~~~Wl~~L~~~i~~~ 128 (132)
T 1v61_A 72 GKIPIAGMVVNRLDEIEGSDCMFEITGSTVERIVVHCNNNQDFQEWMEQLNRLTKSG 128 (132)
T ss_dssp EEECTTTCBCSTTCSSSSSCCCEEEECSSSCEEEECCCCSHHHHHHHHHHHHHHTTS
T ss_pred EEEecceeEEEeccccccCccEEEEecCCCceEEEEeCCHHHHHHHHHHHHHHHhhc
Confidence 44555555554333445679999999987 899999999999999999999998644
No 100
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=97.95 E-value=0.0012 Score=73.78 Aligned_cols=114 Identities=20% Similarity=0.219 Sum_probs=64.7
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 371 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (652)
..+++|.|.++... +.|+.|||+|.++-+++..++..+-. +.. ... ++ ....+...
T Consensus 411 ~LI~eG~l~~~~~~--~k~~~r~~fLF~D~LL~~k~k~~ky~-----------~k~-~~~-----~~-----~~~~d~k~ 466 (536)
T 3odw_A 411 KLVHEGPLTWRVTK--DKAVEVHVLLLDDLLLLLQRQDERLL-----------LKS-HSR-----TL-----TPTPDGKT 466 (536)
T ss_dssp CEEEEEEEEEESCC-----CEEEEEEESSEEEEEEEETTEEE-----------CCC-C----------------------
T ss_pred eeeeecceEEEecC--CCeeEEEEEEcCCEEEEEEEcCCeEE-----------Eee-ccc-----cc-----cccccccc
Confidence 57999999877432 46899999999777777654432100 000 000 00 00001111
Q ss_pred cccceeecccceeeeCCCCCCCcccEEEEeC----CeeEEEEeCCHHHHHHHHHHHHHHHHHhhc
Q 006276 372 AARHTVNLLTSTIKVDADQSDLRFCFRIISP----TKNYTLQAESALDQMDWIEKITGVIASLLS 432 (652)
Q Consensus 372 ~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~----~r~~~lqA~se~e~~~Wi~ai~~ai~~~l~ 432 (652)
.....|.+....++... .+ ..+|.|+.. ..+|.|+|.|.+|++.||.+|+.+|..+..
T Consensus 467 ~~~~~i~L~~l~v~e~~--~d-~~~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~~~ 528 (536)
T 3odw_A 467 MLRPVLRLTSAMTREVA--TD-HKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSLKV 528 (536)
T ss_dssp CCCSEEEGGGEEEEECT--TC-TTEEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHTSCC
T ss_pred ccCceeecccceeeccc--cc-CCceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHhCCC
Confidence 11223555555555422 23 334555543 468999999999999999999999986644
No 101
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=97.94 E-value=0.00054 Score=73.77 Aligned_cols=105 Identities=11% Similarity=0.160 Sum_probs=69.5
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 371 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (652)
..+++|.|.+.... .+.++.|||+|.++-+++..++.... ...
T Consensus 256 ~Li~~G~l~~~~~~-~~k~~~r~~fLF~d~Ll~~k~~~~~~------------------------------------~~~ 298 (402)
T 2dfk_A 256 ELIYTGEMAWIYQP-YGRNQQRVFFLFDHQMVLCKKDLIRR------------------------------------DIL 298 (402)
T ss_dssp CEEEEEEEEEESST-TCCCEEEEEEEETTEEEEEEECSSCT------------------------------------TCE
T ss_pred ceEEeceEEEEecc-CCceEEEEEEeeCCEEEEEEeccccC------------------------------------Cce
Confidence 57899999877542 24578999999977776654332110 001
Q ss_pred cccceeecccceeeeCCCCCC------CcccEEEEeC--CeeEEEEeCCHHHHHHHHHHHHHHHHHhhcc
Q 006276 372 AARHTVNLLTSTIKVDADQSD------LRFCFRIISP--TKNYTLQAESALDQMDWIEKITGVIASLLSS 433 (652)
Q Consensus 372 ~~~~~i~l~~~~vk~~~~~~~------rrfcF~I~t~--~r~~~lqA~se~e~~~Wi~ai~~ai~~~l~~ 433 (652)
...+.+.+....|....+..+ -+++|.|..+ ..+|+|+|.|++|++.||.+|+.++..+...
T Consensus 299 ~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~~~~~ 368 (402)
T 2dfk_A 299 YYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNKETEEVHLFFAKKLEEKIRWLRAFREERKMVQED 368 (402)
T ss_dssp EEEEEEEGGGEEEEECCSEECSSSCCEESSEEEEEESSSSCEEEEECSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeeeeeccceEEEecCCCCccccccccceeEEEEECCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHhh
Confidence 112334444444443222211 2479999986 4689999999999999999999999877654
No 102
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=97.88 E-value=0.00012 Score=66.23 Aligned_cols=105 Identities=12% Similarity=0.063 Sum_probs=67.1
Q ss_pred ceeeeEEEeccC---CCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCC
Q 006276 292 QTIRQGYLSKRS---SNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHD 368 (652)
Q Consensus 292 ~~~k~G~L~K~~---~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 368 (652)
..+..+-|+--. +.-+++-+.|||+|.+|-++|-+.-+.+.. .
T Consensus 12 rlvc~~~l~ev~d~~K~~~kg~qqR~~FLFND~LL~TK~~~kkk~----------------------------------~ 57 (140)
T 3qwm_A 12 RLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKN----------------------------------S 57 (140)
T ss_dssp CEEEEEEEEECSCTTSCCCTTTTEEEEEEESSCEEEEECCC---C----------------------------------C
T ss_pred eEEEEEeeeeeccCcccccccccceEEEEecchhhheeecccCCC----------------------------------C
Confidence 356667774221 122355689999999777666532221110 0
Q ss_pred ccccccceeecccceeeeCCCCCCCcccEEEEeCC------eeEEEEeCCHHHHHHHHHHHHHHHHHhh
Q 006276 369 EKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPT------KNYTLQAESALDQMDWIEKITGVIASLL 431 (652)
Q Consensus 369 ~~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~------r~~~lqA~se~e~~~Wi~ai~~ai~~~l 431 (652)
........+.+.+..|.. .++...+|+|.|.++. .+++|+|.|+.||..||++|+.+|+...
T Consensus 58 ~~Y~vr~~~~L~gm~V~~-~e~e~~p~~~~l~s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI~e~~ 125 (140)
T 3qwm_A 58 VTYSFRQSFSLYGMQVLL-FENQYYPNGIRLTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQ 125 (140)
T ss_dssp CCCCCEEEECCTTEEEEE-ECCSSCTTEEEEEECCTTSCCEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeeecceEEEc-ccCCCCceEEEEEecCCCCcceEEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 011222345565666654 3444679999999863 5799999999999999999999998653
No 103
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=97.88 E-value=0.0014 Score=69.08 Aligned_cols=103 Identities=16% Similarity=0.241 Sum_probs=69.2
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 371 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (652)
..+++|.|.+.+ .++.|||+|.++-+++..++..+. . ++ |. .....
T Consensus 246 ~li~eG~l~~~g-----~~~~~~~fLF~d~Ll~~k~~~~~~-~----------~~-----------------~~-~~~~y 291 (354)
T 1dbh_A 246 EFIMEGTLTRVG-----AKHERHIFLFDGLMICCKSNHGQP-R----------LP-----------------GA-SNAEY 291 (354)
T ss_dssp CEEEEEEEEETT-----CSSCEEEEEESSEEEEEEECTTCC-C----------CT-----------------TS-CCCSE
T ss_pred eEEEEeeEEEEe-----cCceEEEEEeCCEEEEEecCCCCC-C----------CC-----------------CC-CCcce
Confidence 578999998882 578999999977666654432110 0 00 00 00111
Q ss_pred cccceeecccceeeeCCCCCCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 372 AARHTVNLLTSTIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 372 ~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
.....+.+..+.|....+...-+++|.|.+++ .+|+|+|.|++|++.|+.+|+.+..
T Consensus 292 ~~k~~i~l~~~~v~~~~d~~~~~~~F~i~~~~~~~~~l~a~s~~ek~~W~~~i~~~~~ 349 (354)
T 1dbh_A 292 RLKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQY 349 (354)
T ss_dssp EEEEEEESCSCEEEECCCSSSCCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHHT
T ss_pred eEEEEEeccceEEEeCCcccccCccEEEecCCCCEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 22345566556665444444557999999986 8899999999999999999999865
No 104
>3ok8_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 2; I-BAR, protein binding; 2.25A {Mus musculus}
Probab=97.85 E-value=0.0031 Score=61.26 Aligned_cols=197 Identities=12% Similarity=0.195 Sum_probs=134.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHhhCC-CCCCCccccCchhHHHHHHHHHHHHH
Q 006276 12 FRKQIQGLEESAEVLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALETFGGG-HNDPISVAFGGPVMTKFTIALREIGT 90 (652)
Q Consensus 12 FRasv~~~E~~le~l~~~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f~~~-~~d~~~~~~~g~~L~~f~~~lkel~~ 90 (652)
-|.+...|-.=++.+.=-|+.++...++|..++..+..+...|.+++..++.. ..... ...+|.+|...+...+.|..
T Consensus 11 ~~~t~~~y~nimeqfnP~l~nlv~lg~~Y~kAl~a~~~A~~~y~dA~~Kige~A~~S~~-skeLG~vL~qis~~hR~i~~ 89 (222)
T 3ok8_A 11 YRSTMAIYKSIMEQFNPALENLVYLGNNYLRAFHALSEAAEVYFSAIQKIGEQALQSST-SQILGEILVQMSDTQRHLNS 89 (222)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-hhHHHHHHHHHHHHHHHHHH
Confidence 36667777667888888999999999999999888888889999999887641 11111 23347899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH----HHHHHHHHHhccccCCChhhHhHHHHHHHHHHHHHH
Q 006276 91 YKEVLRSQVEHMLNDRLLQYVNIDLHEVKEARKCFDKASL----LYDQAREKFLSLRKGTKTDVAAILEEELHSARSAFE 166 (652)
Q Consensus 91 ~~~~l~~~~~~~i~~pL~~f~~~di~~~ke~Rk~Fek~~~----~YD~al~ky~s~~K~k~~~~~~E~~~eL~~~Rk~f~ 166 (652)
-.+.+..-+-..++.||+.=++.|.+-+...+|+|...-. .|+.+....-.++++.. .......+.+..-+..+.
T Consensus 90 ~le~~~k~f~~elI~pLE~k~e~D~k~i~~~~K~y~~e~k~~~~~leK~~~elkK~~rksq-k~~~k~~e~v~~~q~el~ 168 (222)
T 3ok8_A 90 DLEVVVQTFHGDLLQHMEKNTKLDMQFIKDSCQHYEIEYRHRAANLEKCMSELWRMERKRD-KNAREMKESVNRLHAQMQ 168 (222)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-TTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhc-cChHHHHHHHHHHHhHHH
Confidence 9899888889999999999999999998888888877543 34443333322322221 111111122222222222
Q ss_pred HHHHHHHHHHHHHhhhhhhhHH-HHHHHHHHHHHHHHHHHHHHHhh
Q 006276 167 QARFSLVTALSNVEAKKRFEFL-EAVSGTMDAHLRYFKQGYELLHQ 211 (652)
Q Consensus 167 ~aslDyv~~l~~l~~~k~~e~l-e~l~~~~~aq~~ff~~g~e~~~~ 211 (652)
..- .=..+=..+++++++-|| +.-+++......|+.++.+++.+
T Consensus 169 ~f~-~~s~r~Al~EErRRYcFL~ekhc~~~~~~~~~h~k~~~~L~~ 213 (222)
T 3ok8_A 169 AFV-SESKRAAELEEKRRYRFLAEKHLLLSNTFLQFLGRARGMLQN 213 (222)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 111 111223345667776665 77888888899999998888754
No 105
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=97.83 E-value=0.0064 Score=64.49 Aligned_cols=109 Identities=18% Similarity=0.249 Sum_probs=65.3
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCC----CC
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGG----VH 367 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~----~~ 367 (652)
..+++|.|..+.+. +.|+.|||+|.++-+++..++..+-. ...|+. ..
T Consensus 258 ~li~eG~l~~~~~~--~~~~~~~~fLF~d~Ll~~k~k~~k~~--------------------------~k~~~~~~~~~~ 309 (377)
T 3p6a_A 258 KLVHEGPLTWRVTK--DKAVEVHVLLLDDLLLLLQRQDERLL--------------------------LKSHSRTLTPTP 309 (377)
T ss_dssp CEEEEEEEEEESSS--SCEEEEEEEEESSEEEEEEEETTEEE--------------------------CCCCCCC-----
T ss_pred eEEEECCcEEEecC--CCeEEEEEEeeCCEEEEEEEcCceeE--------------------------EeecccccccCc
Confidence 57899999766432 47899999999777777654432100 000000 00
Q ss_pred CccccccceeecccceeeeCCCCCCCcccEEEEe---CCeeEEEEeCCHHHHHHHHHHHHHHHHHh
Q 006276 368 DEKSAARHTVNLLTSTIKVDADQSDLRFCFRIIS---PTKNYTLQAESALDQMDWIEKITGVIASL 430 (652)
Q Consensus 368 ~~~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t---~~r~~~lqA~se~e~~~Wi~ai~~ai~~~ 430 (652)
+........+.+....++.. ..+.+..|.|.. +...|.|+|.|.+|++.||..|+.+|+.+
T Consensus 310 ~~k~~~~~~i~l~~~~v~e~--~~~~~~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~~~ 373 (377)
T 3p6a_A 310 DGKTMLRPVLRLTSAMTREV--ATDHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSL 373 (377)
T ss_dssp ----CSCSEEEGGGEEEEEC--TTCTTEEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred cccCCCCCeEechhhhcccc--ccccceeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 11111112344555555532 223344455554 33679999999999999999999999854
No 106
>2d1l_A Metastasis suppressor protein 1; IRSP53, actin binding, IMD, protein binding; HET: MSE; 1.85A {Mus musculus}
Probab=97.81 E-value=0.0024 Score=63.64 Aligned_cols=126 Identities=13% Similarity=0.005 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhhhhcccchHHHHHHHHHHhhCC-CCCCCccccCchhHHHHHHHHH
Q 006276 11 MFRKQIQGLEESAEVLRE---RSLKFYKGCRKYTEGLGEGYDGDIAFASALETFGGG-HNDPISVAFGGPVMTKFTIALR 86 (652)
Q Consensus 11 ~FRasv~~~E~~le~l~~---~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f~~~-~~d~~~~~~~g~~L~~f~~~lk 86 (652)
.|++....|..-|++++. -++.+++.+++|..++.....+...|.++|..++.. ....-.....|.+|.+++...+
T Consensus 11 ~~~~~~~~~~~ii~~mk~~~P~~e~lv~~g~ky~~al~~~~~a~~af~Da~qKvad~A~~s~g~s~elG~~L~~i~~~hr 90 (253)
T 2d1l_A 11 ECSALGGLFQTIISDMKGSYPVWEDFINKAGKLQSQLRTTVVAAAAFLDAFQKVADMATNTRGGTREIGSALTRMCMRHR 90 (253)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCcchHHHHHHHHHHHHHHH
Confidence 467777888777775554 689999999999999988888889999999887641 1111112223678999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q 006276 87 EIGTYKEVLRSQVEHMLNDRLLQYVNIDLHEVKEARKCFDKASLLYDQAR 136 (652)
Q Consensus 87 el~~~~~~l~~~~~~~i~~pL~~f~~~di~~~ke~Rk~Fek~~~~YD~al 136 (652)
.|+..++.+...+-..++.||+.-++.|.+.+....|.|.+.-.+|-+-+
T Consensus 91 ~ie~~l~~~~k~~~~eli~pLe~k~e~d~k~~~~~~K~~~~~~k~~r~el 140 (253)
T 2d1l_A 91 SIEAKLRQFSSALIDCLINPLQEQMEEWKKVANQLDKDHAKEYKKARQEI 140 (253)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988877777776665555444
No 107
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=97.80 E-value=0.014 Score=62.96 Aligned_cols=112 Identities=18% Similarity=0.191 Sum_probs=67.1
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 371 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (652)
..+++|.|.++.+. +.|+.||++|.++-+++..++..+.. +..+.... .|. .+...
T Consensus 294 ~li~eG~l~~~~~~--~~~~~~~~fLF~d~Ll~~k~~~~k~~-----------~~~~~~~~----------~~~-~~~~~ 349 (418)
T 3t06_A 294 KMIHEGPLTWRISK--DKTLDLHVLLLEDLLVLLQKQDEKLL-----------LKCHSKTA----------VGS-SDSKQ 349 (418)
T ss_dssp CEEEEEEEEECCBT--TBCCEEEEEEESSEEEEEEECSSCEE-----------CCC------------------------
T ss_pred eeEEeceEEEEeCC--CCeEEEEEEecCCEEEEEEEcCCceE-----------Eeeccccc----------ccC-CCccc
Confidence 57899999877432 46899999999777777654432200 00000000 000 01111
Q ss_pred cccceeecccceeeeCCCCCCCcccEEEEeC-----CeeEEEEeCCHHHHHHHHHHHHHHHHHh
Q 006276 372 AARHTVNLLTSTIKVDADQSDLRFCFRIISP-----TKNYTLQAESALDQMDWIEKITGVIASL 430 (652)
Q Consensus 372 ~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~-----~r~~~lqA~se~e~~~Wi~ai~~ai~~~ 430 (652)
.....+.+....|+.. . +-...|.|++. .++|+|+|.|.+|++.||.+|+.+|..+
T Consensus 350 ~~k~~i~l~~~~v~~~-~--~~~~~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~~ 410 (418)
T 3t06_A 350 TFSPVLKLNAVLIRSV-A--TDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRNA 410 (418)
T ss_dssp CCCSEEEGGGEEEEEC-S--SCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred ccCCceechhceeccc-c--ccCceEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhcC
Confidence 2223455555555522 2 22457888864 3789999999999999999999998744
No 108
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=97.78 E-value=0.002 Score=68.24 Aligned_cols=112 Identities=19% Similarity=0.199 Sum_probs=65.9
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 371 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (652)
..+++|.|.++.+ .+.++.|||+|.++-+++..++..+... .+ . ..++ .|. .+...
T Consensus 252 ~li~~G~l~~~~~--~~~~~~~~~fLF~d~Ll~~k~~~~k~~~-----~~------~-~~~~---------~~~-~~~~~ 307 (368)
T 1xcg_A 252 KMIHEGPLTWRIS--KDKTLDLHVLLLEDLLVLLQKQDEKLLL-----KC------H-SKTA---------VGS-SDSKQ 307 (368)
T ss_dssp CEEEEEEEEECCS--SSCCCEEEEEEESSEEEEEEECSSCEEC-----CC------------------------------
T ss_pred eEEeecceEeeec--CCCeeEEEEEcccccHHHhhccccccee-----ee------c-cccc---------cCC-CCccc
Confidence 5789999986532 2568999999997776665543221000 00 0 0000 000 01111
Q ss_pred cccceeecccceeeeCCCCCCCcccEEEEeC-----CeeEEEEeCCHHHHHHHHHHHHHHHHHh
Q 006276 372 AARHTVNLLTSTIKVDADQSDLRFCFRIISP-----TKNYTLQAESALDQMDWIEKITGVIASL 430 (652)
Q Consensus 372 ~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~-----~r~~~lqA~se~e~~~Wi~ai~~ai~~~ 430 (652)
.....|.+....|+..+ +-+.+|.|++. ..+|+|+|.|++|++.||.+|+.+|..+
T Consensus 308 ~~~~~i~l~~~~v~~~~---~~~~~f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~~a 368 (368)
T 1xcg_A 308 TFSPVLKLNAVLIRSVA---TDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRNA 368 (368)
T ss_dssp CCCSEEEGGGEEEEECS---SCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHHC
T ss_pred CcCCceEccceeeeccc---CCCceEEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHhcC
Confidence 11234555445454321 22568888864 4789999999999999999999999753
No 109
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.77 E-value=0.0002 Score=63.37 Aligned_cols=104 Identities=15% Similarity=0.243 Sum_probs=65.8
Q ss_pred CCceeeeEEEeccCC-------CCCCCceeEEEEEecC-----ceEEEEecCCCCCCCCCCCcccccCcccccccccccc
Q 006276 290 KVQTIRQGYLSKRSS-------NLRGDWKRRFFVLDSR-----GMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRW 357 (652)
Q Consensus 290 ~~~~~k~G~L~K~~~-------~~~~~WkrR~f~L~~~-----g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (652)
.....+||.|.-..+ .....|.|++++|+.- .+|-||..++...
T Consensus 15 ~~e~~kEG~l~~~~~~~~~~~~~~~~~W~k~RLvL~k~g~G~~y~LEfy~PPkssK------------------------ 70 (136)
T 1v5m_A 15 LVDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPKASR------------------------ 70 (136)
T ss_dssp SCSCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEESSTTSSS------------------------
T ss_pred cceeeeeeeeeeecccccccccCcccchhheeeEEEEccCCCceEEEEecCCcccC------------------------
Confidence 346789998842221 1346899999999763 3577775554321
Q ss_pred cccccCCCCCCccccccceeecccceeeeCCCCCCCcccEEEEeCCe-eEEEEeCCHHHHHHHHHHHHHHHHH
Q 006276 358 LSSHYHGGVHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPTK-NYTLQAESALDQMDWIEKITGVIAS 429 (652)
Q Consensus 358 ~~~~~~g~~~~~~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~r-~~~lqA~se~e~~~Wi~ai~~ai~~ 429 (652)
+..+++- ..-..+..++. .+=.|+-+.|.|.+.++ .|+|.|.++.|+++|++.|+.++..
T Consensus 71 ----pK~~i~c-----s~I~EVR~tt~---LEmPD~~nTFVlK~~n~~eyi~ea~d~~q~~sWla~Ir~C~~~ 131 (136)
T 1v5m_A 71 ----PKVSIPL-----SAIIEVRTTMP---LEMPEKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGCVDS 131 (136)
T ss_dssp ----CSSCEET-----TTCCBCCCCCC---SSSCCCTTEECCBCTTSCBEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ----Cccccch-----hhhhhhhhccc---cccCCccceEEEEecCCcEEEEEcCCHHHHHHHHHHHHhhcCC
Confidence 1111100 00011222221 12246789999999887 6999999999999999999988753
No 110
>4akv_A Sorting nexin-33; transport protein, organelle biogenesis; 2.65A {Homo sapiens}
Probab=97.74 E-value=0.0013 Score=70.22 Aligned_cols=155 Identities=11% Similarity=0.165 Sum_probs=103.0
Q ss_pred HHHHHHHHHhhCCCC-CC-CccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 006276 52 IAFASALETFGGGHN-DP-ISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQYVNIDLHEVKEARKCFDKAS 129 (652)
Q Consensus 52 ~~f~~~L~~f~~~~~-d~-~~~~~~g~~L~~f~~~lkel~~~~~~l~~~~~~~i~~pL~~f~~~di~~~ke~Rk~Fek~~ 129 (652)
..+..++..|+.... +. .....+..+|..+++.+..+......-..+....+.++|..++.- +..+++.=..-..+-
T Consensus 227 ~~l~~~l~~l~~~~~~~~~~~~~~Ls~aL~~l~~~~e~i~~l~~~Qa~~d~~~L~E~L~~Y~~l-l~s~Kdll~~R~~aL 305 (386)
T 4akv_A 227 QKLGSAFQAISHSFQMDPPFCSEALNSAISHTGRTYEAIGEMFAEQPKNDLFQMLDTLSLYQGL-LSNFPDIIHLQKGAF 305 (386)
T ss_dssp HHHHHHHHHHHHHTTSSGGGSCHHHHHHHHHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 456666666654211 10 011112456788888888877766666666667778888877665 555554433333344
Q ss_pred HHHHHHHHHHhccccCCChhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 006276 130 LLYDQAREKFLSLRKGTKTDVAAILEEELHSARSAFEQARFSLVTALSNVEAKKRFEFLEAVSGTMDAHLRYFKQGYELL 209 (652)
Q Consensus 130 ~~YD~al~ky~s~~K~k~~~~~~E~~~eL~~~Rk~f~~aslDyv~~l~~l~~~k~~e~le~l~~~~~aq~~ff~~g~e~~ 209 (652)
.+|..+ .|.....| ++ ..++.++.+.|...+-.....|..++.++-.+|-..|..|+..|..|+++..+.+
T Consensus 306 ~k~~ea-~kl~~~~K---~~-----~~~~~e~~~r~e~IS~~~~~El~rF~~~Rv~Dfk~~l~eyle~qi~~~~~~~~~l 376 (386)
T 4akv_A 306 AKVKES-QRMSDEGR---MV-----QDEADGIRRRCRVVGFALQAEMNHFHQRRELDFKHMMQNYLRQQILFYQRVGQQL 376 (386)
T ss_dssp HHHHHH-HHHHHTTS---SC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHHHhCC---cc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455544 23332222 12 2356678999999999999999999999988999999999999999999999888
Q ss_pred hhhHHHH
Q 006276 210 HQMEPYI 216 (652)
Q Consensus 210 ~~l~~~l 216 (652)
+..-+.+
T Consensus 377 e~~l~~f 383 (386)
T 4akv_A 377 EKTLRMY 383 (386)
T ss_dssp HHHHGGG
T ss_pred HHHHHhh
Confidence 7655433
No 111
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=97.61 E-value=0.018 Score=58.92 Aligned_cols=172 Identities=10% Similarity=0.113 Sum_probs=98.7
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHhhCCCC-------C-CCccccCchhH
Q 006276 7 DDSPMFRKQIQGLEESAEVLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALETFGGGHN-------D-PISVAFGGPVM 78 (652)
Q Consensus 7 ~DSP~FRasv~~~E~~le~l~~~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f~~~~~-------d-~~~~~~~g~~L 78 (652)
.+++.|...+-. .++.|..+++.=++.|+.+..-+.+-...+..|+..|..++.... + +...+. ..+.
T Consensus 3 ~~~~~f~~~fw~---g~~~l~~r~~~g~~~~~el~~f~~eRa~iE~eYak~L~kLa~~~~~~~~~~~~~~~~~t~-~~aw 78 (305)
T 2efl_A 3 LGSMSWGTELWD---QFDNLEKHTQWGIDILEKYIKFVKERTEIELSYAKQLRNLSKKYQPKKNSKEEEEYKYTS-CKAF 78 (305)
T ss_dssp ---CCHHHHTTT---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC-------CTTSHH-HHHH
T ss_pred CCCCChhhHHhH---HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCccccccccH-HHHH
Confidence 345666665542 577777777777777776666555544556888999977653211 1 101111 1245
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------------------HHHHHHHHHHHHHHHHHHHHHH
Q 006276 79 TKFTIALREIGTYKEVLRSQVEHMLNDRLLQYVNIDL---------------------HEVKEARKCFDKASLLYDQARE 137 (652)
Q Consensus 79 ~~f~~~lkel~~~~~~l~~~~~~~i~~pL~~f~~~di---------------------~~~ke~Rk~Fek~~~~YD~al~ 137 (652)
..+-..+..+...+..+...+...++.||..|.++.- ..+..+|+.|+....+++.+..
T Consensus 79 ~~~~~~~e~~a~~h~~~a~~l~~~v~~~l~~~~~~~~~~rK~~~~~~~k~~k~~~~~~~~l~KaK~~Y~~~~~e~e~a~~ 158 (305)
T 2efl_A 79 ISNLNEMNDYAGQHEVISENMASQIIVDLARYVQELKQERKSNFHDGRKAQQHIETCWKQLESSKRRFERDCKEADRAQQ 158 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555566666777888888888899999998866522 1233466667777777777776
Q ss_pred HHhccccCC--ChhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 006276 138 KFLSLRKGT--KTDVAAILEEELHSARSAFEQARFSLVTALSNVEAK 182 (652)
Q Consensus 138 ky~s~~K~k--~~~~~~E~~~eL~~~Rk~f~~aslDyv~~l~~l~~~ 182 (652)
++..+.+.. ....+.-....+..++.....+--+|...+..++..
T Consensus 159 ~~~~~~~~~~~s~~~~eK~~~k~~~~~~~~~~a~~~Y~~~v~~~n~~ 205 (305)
T 2efl_A 159 YFEKMDADINVTKADVEKARQQAQIRHQMAEDSKADYSSILQKFNHE 205 (305)
T ss_dssp HHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 664433221 111122223334444444555666666666666544
No 112
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=97.54 E-value=0.0073 Score=64.35 Aligned_cols=117 Identities=17% Similarity=0.173 Sum_probs=68.5
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 371 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (652)
..+++|.|.++... +.++.||++|.++-+++..++..+-. ..+ ....+ . ...+...
T Consensus 256 ~li~eG~l~~~~~~--~~~~~~~~fLF~d~Ll~~k~~~~~~~-----~~~-------~~~~~-----~-----~~~~~~~ 311 (385)
T 1txd_A 256 KMIHEGPLVWKVNR--DKTIDLYTLLLEDILVLLQKQDDRLV-----LRC-------HSKIL-----A-----STADSKH 311 (385)
T ss_dssp CEEEEEEEEEESSS--SCBCCEEEEEESSEEEEEEEETTEEE-----CCC------------------------------
T ss_pred eEEEECcEEEEcCC--CCeEEEEEEecCCeeEEEEecCCeeE-----Eee-------ccccc-----c-----ccCCCCc
Confidence 57899999866332 46889999999777776554322100 000 00000 0 0001111
Q ss_pred cccceeecccceeeeCCCCCCCcccEEEEeC---CeeEEEEeCCHHHHHHHHHHHHHHHHHhhccC
Q 006276 372 AARHTVNLLTSTIKVDADQSDLRFCFRIISP---TKNYTLQAESALDQMDWIEKITGVIASLLSSQ 434 (652)
Q Consensus 372 ~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~---~r~~~lqA~se~e~~~Wi~ai~~ai~~~l~~~ 434 (652)
.....+.+..+.|+... .+.+.+|.|... .++|+|+|.|++|++.||.+|+.+|..+....
T Consensus 312 ~~~~~i~l~~~~v~~~~--~d~~~~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~~~~~ 375 (385)
T 1txd_A 312 TFSPVIKLSTVLVRQVA--TDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQS 375 (385)
T ss_dssp CCCSEEEGGGEEEEECC--C-CCEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCceecccccccccc--cCCceEEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHHhccCCC
Confidence 12234555555555322 233566776643 46899999999999999999999999886553
No 113
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=97.47 E-value=0.00064 Score=65.09 Aligned_cols=103 Identities=18% Similarity=0.232 Sum_probs=66.0
Q ss_pred CceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCcc
Q 006276 291 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 370 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (652)
-..+++|-|..+.+. +.|+.+|++|.++-+++..++..+-. + ..+ +.
T Consensus 69 R~Ll~eG~L~~k~~~--~~~~d~~~fLf~D~Ll~~~~~~~ky~------------------------~--~~~----~~- 115 (185)
T 2lg1_A 69 KKLVRDGSVFLKNAA--GRLKEVQAVLLTDILVFLQEKDQKYI------------------------F--ASL----DQ- 115 (185)
T ss_dssp SCEEEEEEEEEECTT--CCEEEEEEEEESSEEECCEEETTEEE------------------------C--CCC----SS-
T ss_pred CceeeeceEEEeccC--CCeeeEEEEeecCEEEEEEecCCEEE------------------------E--Ecc----cC-
Confidence 368999999866432 47999999999886666544322100 0 000 00
Q ss_pred ccccceeecccceeeeCCCCCCCcccEEEEeC----CeeEEEEeCCHHHHHHHHHHHHHHHHHhh
Q 006276 371 SAARHTVNLLTSTIKVDADQSDLRFCFRIISP----TKNYTLQAESALDQMDWIEKITGVIASLL 431 (652)
Q Consensus 371 ~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~----~r~~~lqA~se~e~~~Wi~ai~~ai~~~l 431 (652)
....+.|....|+..+. +.+ .|-+++. ...|.|+|.|..|++.||.+|+.||..+-
T Consensus 116 --~~pvi~L~~~~vre~a~--d~~-~~fli~~~~~g~~~yel~a~s~~er~~W~~~I~~Ai~~~~ 175 (185)
T 2lg1_A 116 --KSTVISLKKLIVREVAH--EEK-GLFLISMGMTDPEMVEVHASSKEERNSWIQIIQDTINTLN 175 (185)
T ss_dssp --SCSEEESSSCEEECCSS--CSS-EEEEECCSSSCCCCEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCeEeecceEEeccCC--CCC-eEEEEEecCCCCeEEEEEcCCHHHHHHHHHHHHHHHHhCC
Confidence 11234555566664333 333 4545542 36899999999999999999999998764
No 114
>3dyt_A Sorting nexin-9; 3-helix bundle, BAR domain, PX domain, phosphoprotein, protein transport, SH3 domain, transport, transport protein; 2.08A {Homo sapiens} PDB: 3dyu_A 2raj_A 2rai_A 2rak_A*
Probab=97.39 E-value=0.017 Score=61.19 Aligned_cols=153 Identities=10% Similarity=0.124 Sum_probs=98.8
Q ss_pred HHHHHHHHHhhCCC-CCC-CccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 006276 52 IAFASALETFGGGH-NDP-ISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQYVNIDLHEVKEARKCFDKAS 129 (652)
Q Consensus 52 ~~f~~~L~~f~~~~-~d~-~~~~~~g~~L~~f~~~lkel~~~~~~l~~~~~~~i~~pL~~f~~~di~~~ke~Rk~Fek~~ 129 (652)
..|..+|..|+... .+. .....++..|..+|+.+..+.........+....+.++|..++.- +..+++.=..-..+-
T Consensus 207 ~~l~~~l~~l~~~~~~~~~~~~~~L~~al~~l~~~~~~i~~l~~~qa~~d~~~l~E~L~~Y~~~-l~avKd~l~~r~~aL 285 (366)
T 3dyt_A 207 QKIGKALQSLATVFSSSGYQGETDLNDAITEAGKTYEEIASLVAEQPKKDLHFLMECNHEYKGF-LGCFPDIIGTHKGAI 285 (366)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHHHHHHSGGGTHHHHHHHHHHHHHH-HTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 55666666665411 111 111112457888888888888777766666666777777776554 444443222222233
Q ss_pred HHHHHHHHHHhccccCCChhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 006276 130 LLYDQAREKFLSLRKGTKTDVAAILEEELHSARSAFEQARFSLVTALSNVEAKKRFEFLEAVSGTMDAHLRYFKQGYELL 209 (652)
Q Consensus 130 ~~YD~al~ky~s~~K~k~~~~~~E~~~eL~~~Rk~f~~aslDyv~~l~~l~~~k~~e~le~l~~~~~aq~~ff~~g~e~~ 209 (652)
.+|..+ .|.....| ++ ..++.++++.|...+-.....|..++.++..+|-..|..|+..|..|+++..+.+
T Consensus 286 ~k~~e~-~kl~~~~K---~~-----~~~~~~~~~r~e~is~~~~~El~rF~~~r~~Dfk~~l~~yl~~qi~~~k~~~~~w 356 (366)
T 3dyt_A 286 EKVKES-DKLVATSK---IT-----LQDKQNMVKRVSIMSYALQAEMNHFHSNRIYDYNSVIRLYLEQQVQFYETIAEKL 356 (366)
T ss_dssp HHHHTH-HHHHHTTS---SC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHHhccC---cc-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333332 22221111 11 1357788899999999999999999999999999999999999999999999998
Q ss_pred hhhHH
Q 006276 210 HQMEP 214 (652)
Q Consensus 210 ~~l~~ 214 (652)
+.+-+
T Consensus 357 ~~~l~ 361 (366)
T 3dyt_A 357 RQALS 361 (366)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77644
No 115
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=97.31 E-value=0.00016 Score=71.77 Aligned_cols=38 Identities=24% Similarity=0.523 Sum_probs=27.6
Q ss_pred CCceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecC
Q 006276 290 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQ 329 (652)
Q Consensus 290 ~~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~ 329 (652)
.+.+.++|||+|+ ++..++|+||||||+++ .|.||+..
T Consensus 18 ~~~~~~~g~l~~~-~~~~~~w~~rw~vl~~~-~~~~~~~~ 55 (228)
T 3tfm_A 18 PGSPYFHSFLYMN-GGLMNSWKRRWCVLKDE-TFLWFRSK 55 (228)
T ss_dssp ---CCEEEEEEEC-CTTTCCCEEEEEEEETT-EEEEESSC
T ss_pred CCCCceEEEEeec-CcccccceEEEEEEeCC-EEEEeccC
Confidence 3467899999999 45668999999999955 55555543
No 116
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=97.22 E-value=0.0028 Score=66.86 Aligned_cols=109 Identities=19% Similarity=0.291 Sum_probs=66.3
Q ss_pred ceeeeEEEeccCCCC----------CCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccc
Q 006276 292 QTIRQGYLSKRSSNL----------RGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSH 361 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~----------~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (652)
..+++|.|.+..+.. +..++.|||+|.++-+++..++... |. |.
T Consensus 209 ~ll~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~---~~---------------~~-------- 262 (353)
T 1kz7_A 209 KLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREEN---GE---------------GY-------- 262 (353)
T ss_dssp CEEEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCC---CS---------------SC--------
T ss_pred hhheecceEEEecCccccchhhhhhccCcceeEEEEECCEEEEEEecccc---cc---------------CC--------
Confidence 478899987532110 2357899999997777765544311 00 00
Q ss_pred cCCCCCCccccccceeecccceeeeCCCCCCCcccEEEEeC--CeeEEEEeCCHHHHHHHHHHHHHHHHHhhc
Q 006276 362 YHGGVHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISP--TKNYTLQAESALDQMDWIEKITGVIASLLS 432 (652)
Q Consensus 362 ~~g~~~~~~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~--~r~~~lqA~se~e~~~Wi~ai~~ai~~~l~ 432 (652)
.. .........+.+....+.-.. .+.+++|+|... ..+|+|+|.|+++++.|+.+|+.+|.....
T Consensus 263 --~~--~~~y~~k~~i~l~~~~v~e~~--~~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~ 329 (353)
T 1kz7_A 263 --EK--APSYSYKQSLNMTAVGITENV--KGDTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVLTSQLQ 329 (353)
T ss_dssp --CC--SCEEEEEEEEEGGGEEEECCB--TTBTTEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred --CC--CCeEEEEEEeEcccceeeEcC--CCCCceEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 00 001111233444333333211 123688999874 578999999999999999999999976654
No 117
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=97.19 E-value=0.16 Score=51.81 Aligned_cols=161 Identities=12% Similarity=0.147 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHhhCC---C----CCCC-ccccCchhHHHHHHHHHHHHHHHHH
Q 006276 23 AEVLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALETFGGG---H----NDPI-SVAFGGPVMTKFTIALREIGTYKEV 94 (652)
Q Consensus 23 le~l~~~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f~~~---~----~d~~-~~~~~g~~L~~f~~~lkel~~~~~~ 94 (652)
.+.|..+++.=++.|+.+..-+.+-...+..++..|..+... . .+.. ..++ ..+...+-..+..+...+..
T Consensus 9 ~~~l~~~~~~g~~~~~el~~f~keRa~iE~eYak~L~kLakk~~~~~~~~~~~~~~~t~-~~~w~~~l~~~e~~a~~h~~ 87 (301)
T 2efk_A 9 FEVLERHTQWGLDLLDRYVKFVKERTEVEQAYAKQLRSLVKKYLPKRPAKDDPESKFSQ-QQSFVQILQEVNDFAGQREL 87 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC-------CTTSHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccchH-HHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444443333333223456777787665421 1 1111 1111 23556666666777777888
Q ss_pred HHHHHHHHHHHHHHHHHHhhh---------------------HHHHHHHHHHHHHHHHHHHHHHHHhccccCC--ChhhH
Q 006276 95 LRSQVEHMLNDRLLQYVNIDL---------------------HEVKEARKCFDKASLLYDQAREKFLSLRKGT--KTDVA 151 (652)
Q Consensus 95 l~~~~~~~i~~pL~~f~~~di---------------------~~~ke~Rk~Fek~~~~YD~al~ky~s~~K~k--~~~~~ 151 (652)
+...+...+..||..|.++.- ..+..+|+.|+....+++.+..++....+.. ....+
T Consensus 88 ~a~~L~~~v~~~l~~~~~~~~~~rK~~~~~~~k~~k~~~~~~~~l~KaKk~Y~~~~~e~e~a~~~~~~a~~~~~~s~~~~ 167 (301)
T 2efk_A 88 VAENLSVRVCLELTKYSQEMKQERKMHFQEGRRAQQQLENGFKQLENSKRKFERDCREAEKAAQTAERLDQDINATKADV 167 (301)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCHHHH
Confidence 888888888899888865522 2334566666666666666666654432211 11112
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 006276 152 AILEEELHSARSAFEQARFSLVTALSNVEAKKR 184 (652)
Q Consensus 152 ~E~~~eL~~~Rk~f~~aslDyv~~l~~l~~~k~ 184 (652)
.-....+.........+.-+|...|..++..+.
T Consensus 168 eK~~~k~~~~~~~~~~a~~~Y~~~v~~~n~~~~ 200 (301)
T 2efk_A 168 EKAKQQAHLRSHMAEESKNEYAAQLQRFNRDQA 200 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223334444555555666777777777765533
No 118
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=97.17 E-value=0.092 Score=54.80 Aligned_cols=35 Identities=20% Similarity=0.439 Sum_probs=31.0
Q ss_pred CcccEEEEe----CCeeEEEEeCCHHHHHHHHHHHHHHH
Q 006276 393 LRFCFRIIS----PTKNYTLQAESALDQMDWIEKITGVI 427 (652)
Q Consensus 393 rrfcF~I~t----~~r~~~lqA~se~e~~~Wi~ai~~ai 427 (652)
.+++|.|.. +..+|+|+|.|++|++.||.+|+.||
T Consensus 307 ~~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai 345 (346)
T 2z0q_A 307 VKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAK 345 (346)
T ss_dssp TSSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhh
Confidence 368999985 35789999999999999999999987
No 119
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=97.17 E-value=0.011 Score=71.05 Aligned_cols=104 Identities=15% Similarity=0.251 Sum_probs=67.3
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCC-CCCCCCCcccccCcccccccccccccccccCCCCCCcc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSK-SSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 370 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (652)
..+++|.|.+.+++ +.|||+|.++-+++..++..+. ..| +. ...
T Consensus 443 ~Li~eG~l~~~~~k-----~~r~~FLF~D~Ll~~K~~~~~~~~~g-----------------------------~~-~~~ 487 (1049)
T 3ksy_A 443 EFIMEGTLTRVGAK-----HERHIFLFDGLMICCKSNHGQPRLPG-----------------------------AS-NAE 487 (1049)
T ss_dssp CCCCEEEEEETTCS-----SCEEEEEETTEEEEEECCTTCCCCTT-----------------------------SC-CCS
T ss_pred eEEEeceEEEEccC-----ceEEEEeeCCeEEEEEecCccCCCCC-----------------------------CC-CCc
Confidence 56899999887532 7899999977766654432211 001 00 011
Q ss_pred ccccceeecccceeeeCCCCCCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHHHHHh
Q 006276 371 SAARHTVNLLTSTIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIASL 430 (652)
Q Consensus 371 ~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~ai~~~ 430 (652)
......+.+....|....+....+++|.|...+ .+|+|+|.|++|++.||++|+.+..+.
T Consensus 488 y~~k~~i~L~~l~V~~~~d~~~~~~~F~I~~~~~~~~~L~A~S~eeK~~Wi~~I~~~q~k~ 548 (1049)
T 3ksy_A 488 YRLKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQYRS 548 (1049)
T ss_dssp CCCCCEECCSSCCCCCCCCSSSCCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEcCceEEEECCCCccccceEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 122234444444444333444567999999876 489999999999999999998887543
No 120
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=97.06 E-value=0.004 Score=64.37 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=64.6
Q ss_pred ceeeeEEEeccCC-CCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCcc
Q 006276 292 QTIRQGYLSKRSS-NLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 370 (652)
Q Consensus 292 ~~~k~G~L~K~~~-~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (652)
..+.+|.+....+ ...+..+.|||+|.++-+++..+..... + ...
T Consensus 202 ~li~~~~~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~--~--------------------------------~~~ 247 (311)
T 1nty_A 202 ELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDSS--G--------------------------------RSK 247 (311)
T ss_dssp CEEEEEEEEEECSSSSSCCEEEEEEEEESSEEEEEEEEECTT--C--------------------------------CEE
T ss_pred CceeeeeEEEEcCcccccccceeEEEeccCeEEEEEeeccCC--C--------------------------------Cce
Confidence 4567787765532 2335678999999977766654332110 0 001
Q ss_pred ccccceeecccceeeeCCCCCCCcccEEEEe-----CCeeEEEEeCCHHHHHHHHHHHHHHHHHh
Q 006276 371 SAARHTVNLLTSTIKVDADQSDLRFCFRIIS-----PTKNYTLQAESALDQMDWIEKITGVIASL 430 (652)
Q Consensus 371 ~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t-----~~r~~~lqA~se~e~~~Wi~ai~~ai~~~ 430 (652)
....+.+.+....|.-..+ +.+++|.|.. +...|+|+|.|++|++.|+.+|+.+|...
T Consensus 248 y~~k~~i~l~~~~v~e~~~--~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~e~ 310 (311)
T 1nty_A 248 YLYKSKLFTSELGVTEHVE--GDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQER 310 (311)
T ss_dssp EEEEEEEEGGGEEEECCCT--TCTTEEEEEESSSCCTTTCEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred eEEeeeeeccceeeEEccC--CCCceEEEEeCCCCCCCceEEEECCCHHHHHHHHHHHHHHHhhh
Confidence 1112334444444432122 2367899987 34679999999999999999999999754
No 121
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=97.05 E-value=8.9e-05 Score=82.29 Aligned_cols=116 Identities=22% Similarity=0.245 Sum_probs=0.0
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCC-CCCCCCCCcccccCcccccccccccccccccCCCCCCcc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCS-KSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 370 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (652)
..+++|.|.+. +.++.|||+|.++-+++....... ...|... . +.....+ .-
T Consensus 252 ~li~eG~l~~~-----~~~~~~~~fLF~d~Ll~~k~~~~~~~~~g~~~-------~-----------f~~~~~~----~~ 304 (510)
T 3jzy_A 252 KLLHSGKLYKT-----KSNKELHGFLFNDFLLLTYMVKQFAVSSGSEK-------L-----------FSSKSNA----QF 304 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeEEeceEEEc-----CCCcEEEEEcccceeEEeeecccccccCCccc-------c-----------cCccccc----ce
Confidence 46889999876 457899999997777665433221 0000000 0 0000000 00
Q ss_pred ccccceeecccceeeeCCCCCCCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHHHHHhhccC
Q 006276 371 SAARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQ 434 (652)
Q Consensus 371 ~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~ai~~~l~~~ 434 (652)
......|.+....|....+..+.++||+|.++.++|+|+|.|++|++.|+.+|+.+|.......
T Consensus 305 ~v~k~~i~l~~~~v~~~~d~~~~~~~F~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~~~ 368 (510)
T 3jzy_A 305 KMYKTPIFLNEVLVKLPTDPSSDEPVFHISHIDRVYTLRTDNINERTAWVQKIKAASEQYIDTE 368 (510)
T ss_dssp ----------------------------------------------------------------
T ss_pred eEEcCceehhheEEeccCCCCccccceeeeccceeEEeccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0111223343344443223345689999999999999999999999999999999998776543
No 122
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=96.95 E-value=0.42 Score=50.41 Aligned_cols=59 Identities=10% Similarity=0.247 Sum_probs=41.3
Q ss_pred ceeecccceeeeCCCCC-CCcccEEEE--------eCCeeEEEEeCCHHHHHHHHHHHHHHHHHhhcc
Q 006276 375 HTVNLLTSTIKVDADQS-DLRFCFRII--------SPTKNYTLQAESALDQMDWIEKITGVIASLLSS 433 (652)
Q Consensus 375 ~~i~l~~~~vk~~~~~~-~rrfcF~I~--------t~~r~~~lqA~se~e~~~Wi~ai~~ai~~~l~~ 433 (652)
..+.+....|...++.. +....|+|. .|.++|+|+|.|++|++.||.+|+.+|....++
T Consensus 304 ~~i~l~~~~v~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~~~~~~ 371 (377)
T 1foe_A 304 HMIPTEALQVRALPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRDKHRR 371 (377)
T ss_dssp EEEEGGGEEEECCCCTTTTSCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeccccceEEEecCCCccchhhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHhhHHhhh
Confidence 44556555555333322 223448887 346789999999999999999999999766554
No 123
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=96.90 E-value=0.0036 Score=56.27 Aligned_cols=38 Identities=24% Similarity=0.436 Sum_probs=32.4
Q ss_pred CcccEEEEeCC--eeEEEEeCCHHHHHHHHHHHHHHHHHh
Q 006276 393 LRFCFRIISPT--KNYTLQAESALDQMDWIEKITGVIASL 430 (652)
Q Consensus 393 rrfcF~I~t~~--r~~~lqA~se~e~~~Wi~ai~~ai~~~ 430 (652)
...||.|+..+ +++.|.|.|++|++.|+..|+..+...
T Consensus 84 ~~~~FsIiy~~~~k~LdlvA~s~~e~~~Wv~gL~~L~~~~ 123 (131)
T 1mai_A 84 EDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKIIHHS 123 (131)
T ss_dssp GGGEEEEEESSSCCCEEEECSSHHHHHHHHHHHHHHHC--
T ss_pred ccceEEEEECCCCceEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 46899999887 689999999999999999998887544
No 124
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=96.88 E-value=0.36 Score=48.36 Aligned_cols=91 Identities=11% Similarity=0.101 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHhhCCCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006276 23 AEVLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALETFGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHM 102 (652)
Q Consensus 23 le~l~~~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f~~~~~d~~~~~~~g~~L~~f~~~lkel~~~~~~l~~~~~~~ 102 (652)
++.|..+++.=++.|+.+..-+.+-...+..++..|..++........+.....+...+-.....+...+..+...++ .
T Consensus 20 ~~~l~~~~~~g~~~~~el~~f~~eRa~iE~eYak~L~kLa~~~~~~~~~gs~~~~w~~~~~~~e~~a~~h~~~a~~l~-~ 98 (276)
T 2v0o_A 20 FDVLYHNMKHGQISTKELADFVRERATIEEAYSRSMTKLAKSASNYSQLGTFAPVWDVFKTSTEKLANCHLDLVRKLQ-E 98 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCSSSGGGHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 344444444444444444443333333456777777665421110001111124677787888888888889988885 7
Q ss_pred HHHHHHHHHHhh
Q 006276 103 LNDRLLQYVNID 114 (652)
Q Consensus 103 i~~pL~~f~~~d 114 (652)
++.||..|.++.
T Consensus 99 ~~~~l~~~~~~~ 110 (276)
T 2v0o_A 99 LIKEVQKYGEEQ 110 (276)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 789999997754
No 125
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=96.82 E-value=0.091 Score=57.76 Aligned_cols=120 Identities=8% Similarity=0.144 Sum_probs=74.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------h---------------------HHHHHHHHHHHH
Q 006276 77 VMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQYVNID--------L---------------------HEVKEARKCFDK 127 (652)
Q Consensus 77 ~L~~f~~~lkel~~~~~~l~~~~~~~i~~pL~~f~~~d--------i---------------------~~~ke~Rk~Fek 127 (652)
++..+-..+..+...+..+...+...++.||..|.++. . +.+..+|+.|++
T Consensus 82 aw~~~~~e~e~~a~~H~~~a~~L~~~v~~~l~~~~~e~~~K~~~~~~kerK~~~~~~~k~qk~l~~~~~~l~KaKk~Y~~ 161 (486)
T 3haj_A 82 AWMAFMSEAERVSELHLEVKASLMNDDFEKIKNWQKEAFHKQMMGGFKETKEAEDGFRKAQKPWAKKLKEVEAAKKAHHA 161 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCBCSSSSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677777777888888888899888999999987653 1 233445666666
Q ss_pred HHHHHHHHHHHHhcccc--CCChhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH
Q 006276 128 ASLLYDQAREKFLSLRK--GTKTDVAAILEEELHSARSAFEQARFSLVTALSNVEAKKRFEFLEAVSGTMDA 197 (652)
Q Consensus 128 ~~~~YD~al~ky~s~~K--~k~~~~~~E~~~eL~~~Rk~f~~aslDyv~~l~~l~~~k~~e~le~l~~~~~a 197 (652)
...+++.+..++..... ......+.-+...+..++..-..+.-+|...+..++..+ .++.+.+...+..
T Consensus 162 ~cke~e~a~~~~~~a~~d~~~t~k~~eK~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~~-~~y~~~~~~~~~~ 232 (486)
T 3haj_A 162 ACKEEKLAISREANSKADPSLNPEQLKKLQDKIEKCKQDVLKTKEKYEKSLKELDQGT-PQYMENMEQVFEQ 232 (486)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 66666666665543311 111223333444556666666666778877777776553 2444444444333
No 126
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A
Probab=96.79 E-value=0.16 Score=52.79 Aligned_cols=116 Identities=9% Similarity=0.155 Sum_probs=68.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------h---------------------HHHHHHHHHHH
Q 006276 76 PVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQYVNID--------L---------------------HEVKEARKCFD 126 (652)
Q Consensus 76 ~~L~~f~~~lkel~~~~~~l~~~~~~~i~~pL~~f~~~d--------i---------------------~~~ke~Rk~Fe 126 (652)
.+...+-..+..+...+..+...+...++.||..|.++. + ..+..+|+.|+
T Consensus 79 ~aw~~~~~e~e~~a~~H~~~a~~L~~~v~~~l~~~~~e~~~k~~~~~~ke~K~~~~~~~k~~k~~~~~~~~l~KaKk~Y~ 158 (337)
T 2x3v_A 79 RAWGAMMTEADKVSELHQEVKNSLLNEDLEKVKNWQKDAYHKQIMGGFKETKEAEDGFRKAQKPWAKKMKELEAAKKAYH 158 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCBCSSCSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356667777777788888888888888999999886642 1 23445566666
Q ss_pred HHHHHHHHHHHHHhcccc--CCChhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Q 006276 127 KASLLYDQAREKFLSLRK--GTKTDVAAILEEELHSARSAFEQARFSLVTALSNVEAKKRFEFLEAVS 192 (652)
Q Consensus 127 k~~~~YD~al~ky~s~~K--~k~~~~~~E~~~eL~~~Rk~f~~aslDyv~~l~~l~~~k~~e~le~l~ 192 (652)
....+++.+..++..... ...+..+.-+...+..++..-..+.-+|...+..++.. +..+.+.+.
T Consensus 159 ~~c~e~e~a~~~~~~~~~~~~~s~k~~eK~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~-~~~~~~~~~ 225 (337)
T 2x3v_A 159 LACKEERLAMTREMNSKTEQSVTPEQQKKLVDKVDKCRQDVQKTQEKYEKVLEDVGKT-TPQYMEGME 225 (337)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHhHHhccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHH
Confidence 666666666554432221 11222233334445555555566666777667666544 223444333
No 127
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=96.77 E-value=0.0036 Score=60.50 Aligned_cols=97 Identities=21% Similarity=0.388 Sum_probs=60.5
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecC-----c-eEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCC
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSR-----G-MLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGG 365 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~-----g-~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 365 (652)
.++.||++..+.+ |.|++|||||+.- . .|..|++..++..|.
T Consensus 8 ~~v~eg~vk~r~~---KkWk~rw~vlrk~s~~adcl~L~vYkd~~dr~k~~----------------------------- 55 (224)
T 3ml4_A 8 AALVEGQVKLRDG---KKWKSRWLVLRKPSPVADCLLMLVYKDKCERSKGL----------------------------- 55 (224)
T ss_dssp CCSEEEEEEEC------CCEEEEEEEECSSTTSSCEEEEEESSSHHHHSCC-----------------------------
T ss_pred ceeEEEeeeeecC---CceeeEEEEEEcCCCchheEEEEEEcChhhhhcCC-----------------------------
Confidence 3577999988843 6899999999752 2 455565544321110
Q ss_pred CCCccccccceeeccc-ceeeeCCCCCCCcccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHH
Q 006276 366 VHDEKSAARHTVNLLT-STIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGV 426 (652)
Q Consensus 366 ~~~~~~~~~~~i~l~~-~~vk~~~~~~~rrfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~a 426 (652)
..+..+.|.. +.+.....-...++.+.|+..+.+++|..+|++++.+|-..|+..
T Consensus 56 ------~~KaslsL~~~~GlE~g~~ldk~s~TlAIIc~d~~~vLAFds~e~l~~W~~~l~~s 111 (224)
T 3ml4_A 56 ------RERSSLTLEDICGLEPALPYEGLAHTLAIICLSQAVMLGFDSHEAMCAWDTRIRYA 111 (224)
T ss_dssp ------CCSEEEEECCEEEEEEEEEETTEEEEEEEEESSCEEEEECSSHHHHHHHHHHHHHH
T ss_pred ------cccceeehHHhcCccccccccCcccEEEEEecCcEEEEEeCCHHHHHHHHHHHhhc
Confidence 0111222211 111111122244799999999999999999999999999988663
No 128
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=96.67 E-value=0.011 Score=62.34 Aligned_cols=106 Identities=13% Similarity=0.173 Sum_probs=62.8
Q ss_pred ceeeeEEEeccCCC----CCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCC
Q 006276 292 QTIRQGYLSKRSSN----LRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVH 367 (652)
Q Consensus 292 ~~~k~G~L~K~~~~----~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 367 (652)
..+++|-+....+. ..+.++.|||+|.++-+++..+..... .|. .
T Consensus 206 ~Ll~~g~~~v~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~-~~~----------------------------~-- 254 (354)
T 2rgn_B 206 KLLGQDTFWVTEPEAGGLLSSRGRERRVFLFEQIIIFSEALGGGV-RGG----------------------------T-- 254 (354)
T ss_dssp CEEEEEEEEEECC-------CCCCEEEEEEESSEEEEEEECC--------------------------------------
T ss_pred cccccceEEEEcCCcCccccCCCceEEEEEeCCcEEEEEeccCCC-CCC----------------------------C--
Confidence 46778877654321 224678999999977766654432210 000 0
Q ss_pred CccccccceeecccceeeeCCCCCCCcccEEEEeC-----CeeEEEEeCCHHHHHHHHHHHHHHHHHh
Q 006276 368 DEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISP-----TKNYTLQAESALDQMDWIEKITGVIASL 430 (652)
Q Consensus 368 ~~~~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~-----~r~~~lqA~se~e~~~Wi~ai~~ai~~~ 430 (652)
.........+.+....+....+ +-+++|.|... ...|+|+|.|+++++.||.+|+.+|...
T Consensus 255 ~~~y~~k~~i~l~~~~v~~~~~--~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 320 (354)
T 2rgn_B 255 QPGYVYKNSIKVSCLGLEGNLQ--GDPCRFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILESQ 320 (354)
T ss_dssp -CCEEEEEEEEGGGEEEEESGG--GCTTEEEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEcceeeccceeeeeccC--CCCceEEEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 0011112334444444432211 23678999873 3689999999999999999999999653
No 129
>3g9g_A Suppressor of yeast profilin deletion; SYP1, BAR domain, FCH, adaptor, endocytosis, phosphoprotein; 2.40A {Saccharomyces cerevisiae}
Probab=96.59 E-value=0.1 Score=53.08 Aligned_cols=168 Identities=13% Similarity=0.099 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHhhC----------------CC----------CCCCccccC
Q 006276 21 ESAEVLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALETFGG----------------GH----------NDPISVAFG 74 (652)
Q Consensus 21 ~~le~l~~~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f~~----------------~~----------~d~~~~~~~ 74 (652)
+-++.|..+|....+.|+.+..-+.+-...++.++..|..+.. +. .++.. ..
T Consensus 43 qa~~iL~~Rl~~~k~i~keL~~f~kERa~IEe~YakqLrkLakk~~~l~k~~~~~~~~~~vlt~ee~~~~~~~e~G--~l 120 (287)
T 3g9g_A 43 EATETIRIRLSQVKLLNKDFYLLFKELANLKRNYAQQLRKIIAENEDITKILNAQMIESNVLTPQEMSAFRFNSLG--EL 120 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHTTSSCHHHHHHCCCCCST--TH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhccccccchhhccccccccc--cH
Confidence 4455666666666666666665555555556677777754432 10 02211 11
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCChhhHh
Q 006276 75 GPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQYVNI--DLHEVKEARKCFDKASLLYDQAREKFLSLRKGTKTDVAA 152 (652)
Q Consensus 75 g~~L~~f~~~lkel~~~~~~l~~~~~~~i~~pL~~f~~~--di~~~ke~Rk~Fek~~~~YD~al~ky~s~~K~k~~~~~~ 152 (652)
.++...+-..+..+...+..+...+..-++.||.+|.+. .+...+..-.+.+....++|.+ .++.+
T Consensus 121 ~~~W~~v~~e~e~~a~~H~~la~~L~~ev~~pL~~~~e~~~~~~e~~~l~~~L~~~ak~le~~-------~kk~~----- 188 (287)
T 3g9g_A 121 RNVWDTVIEELKSDLKSSTEYYNTLDQQVVRELKESVENNTSWRESKDLHSKLSKNAASIEHY-------SKNNE----- 188 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHCSSSSCHHHHHHHHHHHHHHHHHHHHHHC-------SSCCS-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHH-------HhhHH-----
Confidence 235677778888888889999999999999999999865 3444333333444444433332 22212
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHH-HHHHHHHHHHHHHHHH
Q 006276 153 ILEEELHSARSAFEQARFSLVTALSNVEAKKRFEFL-EAVSGTMDAHLRYFKQ 204 (652)
Q Consensus 153 E~~~eL~~~Rk~f~~aslDyv~~l~~l~~~k~~e~l-e~l~~~~~aq~~ff~~ 204 (652)
+...|.+++..+...+=.++..+++++..+ +.+| +.|+.|.....++..+
T Consensus 189 -a~~~le~a~~qWes~aP~~fe~fQ~lEEeR-L~~Lkd~L~~y~~~~sd~~~~ 239 (287)
T 3g9g_A 189 -NSSHLEEARRQWDQQSPYLFELFETIDYNR-LDTLKNCMLRFQTSFSDYLLN 239 (287)
T ss_dssp -CTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 234688899999988888888888887653 3344 3344444444444333
No 130
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=96.57 E-value=0.35 Score=51.80 Aligned_cols=155 Identities=10% Similarity=0.001 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHhhCCCC------CCCccccCchhHHHHHHH
Q 006276 11 MFRKQIQGLEESAEVLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALETFGGGHN------DPISVAFGGPVMTKFTIA 84 (652)
Q Consensus 11 ~FRasv~~~E~~le~l~~~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f~~~~~------d~~~~~~~g~~L~~f~~~ 84 (652)
.|-+.+.+.+..++ +++.+.+..+.= -..+..|+..|..++.-.. ++...+ ...+...|-..
T Consensus 13 gf~~L~kr~~~g~~----lledl~~F~reR-------A~IE~eYAk~L~kLakk~~~k~~~~~~~~~t-l~~aW~~ll~e 80 (406)
T 4dyl_A 13 GHGVLQQMQEAELR----LLEGMRKWMAQR-------VKSDREYAGLLHHMSLQDSGGQSRAISPDSP-ISQSWAEITSQ 80 (406)
T ss_dssp HHHHHHHHHHHHHH----HHHHHHHHHHHH-------HHHHHHHHHHHHHHC------------CCSH-HHHHHHHHHHH
T ss_pred chHHHHHHHHHHHH----HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhcccccCCCCCCh-HHHHHHHHHHH
Confidence 45555555555553 555555544421 1234667788876653211 111001 12356777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---------------------h-HHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 006276 85 LREIGTYKEVLRSQVEHMLNDRLLQYVNID---------------------L-HEVKEARKCFDKASLLYDQAREKFLSL 142 (652)
Q Consensus 85 lkel~~~~~~l~~~~~~~i~~pL~~f~~~d---------------------i-~~~ke~Rk~Fek~~~~YD~al~ky~s~ 142 (652)
...+...|..+..++...++.||..++++- + +.+..+|+.|++...+.+.+..+|...
T Consensus 81 te~~a~~H~~lae~L~~~v~~~l~~~~ke~~~~rK~~~~~~~klqk~~~k~~~~~lekaKk~Y~~~cke~e~A~~k~~~~ 160 (406)
T 4dyl_A 81 TEGLSRLLRQHAEDLNSGPLSKLSLLIRERQQLRKTYSEQWQQLQQELTKTHSQDIEKLKSQYRALARDSAQAKRKYQEA 160 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 777888888888888888888888876642 2 344456667777777777777766554
Q ss_pred ccCCChhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006276 143 RKGTKTDVAAILEEELHSARSAFEQARFSLVTALSNVE 180 (652)
Q Consensus 143 ~K~k~~~~~~E~~~eL~~~Rk~f~~aslDyv~~l~~l~ 180 (652)
.+.++.+++ ...+..+...-..+--+|...|..+.
T Consensus 161 ~k~ke~eK~---~~k~~k~~~~~~~a~neY~~~l~~~N 195 (406)
T 4dyl_A 161 SKDKDRDKA---KDKYVRSLWKLFAHHNRYVLGVRAAQ 195 (406)
T ss_dssp ------CHH---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCchHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 433322222 12233333333333345555555544
No 131
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=96.56 E-value=0.33 Score=51.42 Aligned_cols=155 Identities=10% Similarity=0.051 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHhhCCCCCCCccccC-chhHHHHHHHHHHHHHHHHHHHH
Q 006276 19 LEESAEVLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALETFGGGHNDPISVAFG-GPVMTKFTIALREIGTYKEVLRS 97 (652)
Q Consensus 19 ~E~~le~l~~~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f~~~~~d~~~~~~~-g~~L~~f~~~lkel~~~~~~l~~ 97 (652)
|=..|..++..++.+-+.+++++.....+..+...+..+...|.+++.+-...+++ +..=..++.++..+......+ .
T Consensus 19 FR~~l~~~E~~~~~l~~~l~kl~k~~~~~~~a~~~~~~a~~~f~~~L~~~~~~~~~~~~~d~~v~~~l~~f~~~~~ei-~ 97 (385)
T 2q13_A 19 TRSLLGVFEEDATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKEYEKQRFPLGGDDEVMSSTLQQFSKVIDEL-S 97 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCCCC---CCHHHHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHHHHHHHH-H
Confidence 45678899999999999999999888888777888888888888765543221110 001122345677777766666 3
Q ss_pred HHHHHHHHHHHHHHHhhhHHHH-HHHHHHHHHHHHHHHHHHHHh-ccccCCChhhHhHHHHHHHHHHHHHHHHHHHHHH
Q 006276 98 QVEHMLNDRLLQYVNIDLHEVK-EARKCFDKASLLYDQAREKFL-SLRKGTKTDVAAILEEELHSARSAFEQARFSLVT 174 (652)
Q Consensus 98 ~~~~~i~~pL~~f~~~di~~~k-e~Rk~Fek~~~~YD~al~ky~-s~~K~k~~~~~~E~~~eL~~~Rk~f~~aslDyv~ 174 (652)
.....+...++..+..-|..+. ..=+.+...+..||.+..+|- .+.|-...++..+.+..+.++...+..+.-.|..
T Consensus 98 ~~~~~l~~~~~~~~~~PL~~f~~~di~~~ke~kk~fek~~~~yd~al~k~~~~~k~k~~e~~~~ea~~~l~~~rk~f~~ 176 (385)
T 2q13_A 98 SCHAVLSTQLADAMMFPITQFKERDLKEILTLKEVFQIASNDHDAAINRYSRLSKKRENDKVKYEVTEDVYTSRKKQHQ 176 (385)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 4445556666665555555554 334667788888888888884 3444211111112223344444444444444443
No 132
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=96.53 E-value=0.22 Score=52.13 Aligned_cols=116 Identities=9% Similarity=0.150 Sum_probs=70.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------hH---------------------HHHHHHHHHH
Q 006276 76 PVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQYVNID--------LH---------------------EVKEARKCFD 126 (652)
Q Consensus 76 ~~L~~f~~~lkel~~~~~~l~~~~~~~i~~pL~~f~~~d--------i~---------------------~~ke~Rk~Fe 126 (652)
.+...+-..+..+...+..+...+...++.||..|.++. ++ .+..+|+.|+
T Consensus 88 ~aw~~l~~e~e~~a~~H~~la~~L~~~v~~~l~~~~~e~~~k~~~~~~ke~K~~~~~~~k~~k~~~~~~~~l~KaKk~Y~ 167 (350)
T 3aco_A 88 KAWMAFMSEAERVSELHLEVKASLMNDDFEKIKNWQKEAFHKQMMGGFKETKEAEDGFRKAQKPWAKKLKEVEAAKKAHH 167 (350)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTSCBCTTSSBHHHHHHHHHHHHHTSHHHHHHHHHHHTTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356777777778888889999999999999999886641 22 3334555555
Q ss_pred HHHHHHHHHHHHHhccccCC--ChhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Q 006276 127 KASLLYDQAREKFLSLRKGT--KTDVAAILEEELHSARSAFEQARFSLVTALSNVEAKKRFEFLEAVS 192 (652)
Q Consensus 127 k~~~~YD~al~ky~s~~K~k--~~~~~~E~~~eL~~~Rk~f~~aslDyv~~l~~l~~~k~~e~le~l~ 192 (652)
....+++.+..++....... .+..+.-+...+..++..-..+.-+|...+..++..+. .+.+.+.
T Consensus 168 ~~c~e~e~a~~~~~~~~~d~~~~~k~~eK~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~~~-~~~~~~~ 234 (350)
T 3aco_A 168 AACKEEKLAISREANSKADPSLNPEQLKKLQDKIEKCKQDVLKTKEKYEKSLKELDQGTP-QYMENME 234 (350)
T ss_dssp HHHHHHHHHHHHHTTSSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHH-HHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 55566666665553332211 12223334445555555566666777777777765432 3444333
No 133
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=96.46 E-value=0.5 Score=47.27 Aligned_cols=212 Identities=8% Similarity=0.036 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHhhCCCCCCCc----cccCchhHHHHHHHHHHHHHHHHH
Q 006276 19 LEESAEVLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALETFGGGHNDPIS----VAFGGPVMTKFTIALREIGTYKEV 94 (652)
Q Consensus 19 ~E~~le~l~~~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f~~~~~d~~~----~~~~g~~L~~f~~~lkel~~~~~~ 94 (652)
|=..|..++..++.+-+.+++++.....++.+...+..+...|..++.+-.. ....++. ++.++..+......
T Consensus 19 FR~~l~~~E~~~~~l~~~l~kl~k~~~~~~~a~~~~~~a~~~f~~~L~~~~~~~~~~~~~d~~---~~~~L~~f~~~l~e 95 (265)
T 2q12_A 19 TRSLLGVFEEDATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKEYEKQRFPLGGDDEV---MSSTLQQFSKVIDE 95 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCCC-----CH---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcHH---HHHHHHHHHHHHHH
Confidence 4467889999999999999999888777777788888888888776554211 1111222 35667777776655
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHH-HHHHHHHHHHHHHHHHHHHHh-ccccCCChhhHhHHHHHHHHHHHHHHHHHHHH
Q 006276 95 LRSQVEHMLNDRLLQYVNIDLHEVK-EARKCFDKASLLYDQAREKFL-SLRKGTKTDVAAILEEELHSARSAFEQARFSL 172 (652)
Q Consensus 95 l~~~~~~~i~~pL~~f~~~di~~~k-e~Rk~Fek~~~~YD~al~ky~-s~~K~k~~~~~~E~~~eL~~~Rk~f~~aslDy 172 (652)
+.... ..++..+++.+..-|..+. +.-+.+...+..||.+..+|- .+.|-....+....+..+.++-..+..+.-.|
T Consensus 96 i~~~~-~~l~~~~~~~~~~PL~~f~~~dlk~~ke~kk~fdk~~~~yd~al~k~~~~~k~k~~e~~l~Ea~~~l~~~Rk~f 174 (265)
T 2q12_A 96 LSSCH-AVLSTQLADAMMFPITQFKERDLKEILTLKEVFQIASNDHDAAINRYSRLSKKRENDKVKYEVTEDVYTSRKKQ 174 (265)
T ss_dssp HHHHH-HHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHH
Confidence 54333 3334555555444465554 444578888888888888884 34442222221222344556666665555555
Q ss_pred HHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH-HHHHHHHHHHHHHhHHHH
Q 006276 173 VTALSNVEAKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYI-NQVLTYAQQSRERSNYEQ 234 (652)
Q Consensus 173 v~~l~~l~~~k~~e~le~l~~~~~aq~~ff~~g~e~~~~l~~~l-~el~~~lq~~r~~~~~~~ 234 (652)
....-+.-....---...=..++.....|++..+..+..--..+ +++..++..++......+
T Consensus 175 ~~~~ldyv~~l~~l~~kk~~e~le~l~~~~~a~~~ff~~g~e~~~~~~~p~~~~l~~~l~~~r 237 (265)
T 2q12_A 175 HQTMMHYFCALNTLQYKKKIALLEPLLGYMQAQISFFKMGSENLNEQLEEFLANIGTSVQNVR 237 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44433322211100011122555666666666565555544444 466666666665555433
No 134
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=96.28 E-value=0.9 Score=48.45 Aligned_cols=122 Identities=10% Similarity=0.042 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHhhCCCCCCCccccC-chhHHHHHHHHHHHHHHHHHHHH
Q 006276 19 LEESAEVLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALETFGGGHNDPISVAFG-GPVMTKFTIALREIGTYKEVLRS 97 (652)
Q Consensus 19 ~E~~le~l~~~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f~~~~~d~~~~~~~-g~~L~~f~~~lkel~~~~~~l~~ 97 (652)
|=..|..++..++.+-+.+++++....+++.+...+..+...|..++.+......+ +..-..+...+..+......+..
T Consensus 42 FRa~l~~~E~~~~~l~~~l~kl~k~~~~~~~~~~~~~~a~~~f~~~l~~~~~~~~~~~~~d~~~~~~l~~f~~~~~ei~~ 121 (407)
T 4h8s_A 42 TRSLLSVFEEDAGTLTDYTNQLLQAMQRVYGAQNEMCLATQQLSKQLLAYEKQNFALGKGDEEVISTLHYFSKVVDELNL 121 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGSCCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCcHHHHHHHHHHHHHHHHHHH
Confidence 44678899999999999999999988888888888998888887765443221111 11123345556666665555543
Q ss_pred HHHHHHHHHHHHHHHhhhHHHH-HHHHHHHHHHHHHHHHHHHHhc
Q 006276 98 QVEHMLNDRLLQYVNIDLHEVK-EARKCFDKASLLYDQAREKFLS 141 (652)
Q Consensus 98 ~~~~~i~~pL~~f~~~di~~~k-e~Rk~Fek~~~~YD~al~ky~s 141 (652)
. ...+...++..+...|..+. +.-+.|...+..||.+..+|-+
T Consensus 122 ~-~~~L~~~~~~~i~~pL~~f~k~di~~~ke~kK~Fek~~~~Yd~ 165 (407)
T 4h8s_A 122 L-HTELAKQLADTMVLPIIQFREKDLTEVSTLKDLFGLASNEHDL 165 (407)
T ss_dssp H-HHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 23445556665555565543 4456777888889888888843
No 135
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=95.97 E-value=0.15 Score=52.35 Aligned_cols=38 Identities=3% Similarity=0.048 Sum_probs=31.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006276 76 PVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQYVNI 113 (652)
Q Consensus 76 ~~L~~f~~~lkel~~~~~~l~~~~~~~i~~pL~~f~~~ 113 (652)
.+...+-..+..+...+..+...+...++.||..|.++
T Consensus 88 ~aw~~i~~e~e~~a~~H~~~a~~L~~~v~~~l~~~~~~ 125 (312)
T 3abh_A 88 KAWMAFMSEAERVSELHLEVKASLMNDDFEKIKNWQKE 125 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36777778888888889999999999999999988665
No 136
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=95.71 E-value=0.042 Score=62.69 Aligned_cols=95 Identities=20% Similarity=0.402 Sum_probs=56.1
Q ss_pred CceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCcc
Q 006276 291 VQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEK 370 (652)
Q Consensus 291 ~~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (652)
..+++.|++.|+++.+...|+||++.|..+++-.. ..... . ..+
T Consensus 557 ~~~i~~G~~~k~~g~f~~~~~rR~~~l~p~r~e~~-~e~~~----~--------------~~l----------------- 600 (689)
T 3v5w_A 557 KDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWR-GEGEA----P--------------QSL----------------- 600 (689)
T ss_dssp SCCCEEEEEEEC-------CEEEEEEEETTEEEEE-CTTSC----C--------------CEE-----------------
T ss_pred CcceeecccccCCCcccchhhhhccccCCCccccc-ccCCC----C--------------cce-----------------
Confidence 45789999999987777899999999985554332 11100 0 000
Q ss_pred ccccceeecccceeeeCCCCCCCcccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 371 SAARHTVNLLTSTIKVDADQSDLRFCFRIISPT-KNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 371 ~~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
.....+.. | ........+||.+...+ ++|++++.|+.++.+|+..|+.+-.
T Consensus 601 -~~~~~v~~----v--~k~~i~~~~~l~~~~k~~k~f~~~t~~~~~~~~W~~~i~~~~~ 652 (689)
T 3v5w_A 601 -LTMEEIQS----V--EETQIKERKCLLLKIRGGKQFILQCDSDPELVQWKKELRDAYR 652 (689)
T ss_dssp -EEGGGEEE----E--EEEESSSCEEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred -eeeccccc----c--ccCcCCCCcceeeeecCCcEEEEECCChHHHHHHHHHHHHHHH
Confidence 00000110 1 11123346788888765 8899999999999999999998763
No 137
>3m3w_A Pacsin3, protein kinase C and casein kinase II substrate P; mouse, BAR domain, endocytosis; 2.60A {Mus musculus} PDB: 3syv_A 3qe6_A
Probab=95.04 E-value=2.8 Score=43.02 Aligned_cols=37 Identities=11% Similarity=0.150 Sum_probs=31.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006276 76 PVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQYVN 112 (652)
Q Consensus 76 ~~L~~f~~~lkel~~~~~~l~~~~~~~i~~pL~~f~~ 112 (652)
.++..+-.....+...+..+..++...++.||..|.+
T Consensus 79 ~aw~~i~~e~e~~a~~H~~~a~~l~~~v~~~l~~~~k 115 (320)
T 3m3w_A 79 KAWHAFFTAAERLSELHLEVREKLHGPDSERVRTWQR 115 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3577777778888888999999999999999998875
No 138
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster}
Probab=94.20 E-value=3.6 Score=41.35 Aligned_cols=37 Identities=5% Similarity=0.074 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006276 77 VMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQYVNI 113 (652)
Q Consensus 77 ~L~~f~~~lkel~~~~~~l~~~~~~~i~~pL~~f~~~ 113 (652)
++..+-..+..+...+..+...+...++.||..|.++
T Consensus 68 aw~~~~~~~e~~a~~h~~~a~~l~~~v~~~l~~~~~e 104 (290)
T 3i2w_A 68 AWKGVLTESERISDVHMKIKDNLCNDVNSQIKTWQKE 104 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667777777788888999999989999999999874
No 139
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=93.99 E-value=3.9 Score=37.98 Aligned_cols=82 Identities=21% Similarity=0.275 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcccc-CCChhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006276 101 HMLNDRLLQYVNIDLHEVKEARKCFDKASLLYDQAREKFLSLRK-GTKTDVAAILEEELHSARSAFEQARFSLVTALSNV 179 (652)
Q Consensus 101 ~~i~~pL~~f~~~di~~~ke~Rk~Fek~~~~YD~al~ky~s~~K-~k~~~~~~E~~~eL~~~Rk~f~~aslDyv~~l~~l 179 (652)
..+++.++.+... |..+|..=+.|++++..||..--|.-.+.| +|..++++.-+..|..+-..|.+.--|++..|+.+
T Consensus 101 arllekiqkyfQ~-IEtlK~ql~nf~e~RLiYDHYKlKvdELEK~~KdSeKI~RNQsKLssAEtaYkqvcsDiInkMnkl 179 (294)
T 3caz_A 101 ARLLEKIQKYRQE-IEEIKKEYKETDKYRERYDHYKVKLDNLEKKNKDQERIERNQQKFKDAEAAYSSVCADLIQKMETV 179 (294)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHHHHHHhhhHHHHHHHHHHHHhHHHHHhccchHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 3556777777766 888888888999999999999999888776 66777787777889999999999999999999887
Q ss_pred hhhh
Q 006276 180 EAKK 183 (652)
Q Consensus 180 ~~~k 183 (652)
-.++
T Consensus 180 l~n~ 183 (294)
T 3caz_A 180 WKKH 183 (294)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6553
No 140
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=93.73 E-value=0.12 Score=52.07 Aligned_cols=53 Identities=15% Similarity=0.181 Sum_probs=39.8
Q ss_pred eeecccceeeeCC-CCCCCcccEEEEeCC--eeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 376 TVNLLTSTIKVDA-DQSDLRFCFRIISPT--KNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 376 ~i~l~~~~vk~~~-~~~~rrfcF~I~t~~--r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
.+.|..|.+.... ....+.|+|+|.+++ .+++|+|.+.+++..|+.+|..+|.
T Consensus 207 ~ipL~m~~~tR~~~~~d~~~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~~i~ 262 (263)
T 1z87_A 207 HVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 262 (263)
T ss_dssp EEESSSEEEEEECCSSCSSSCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred ccCcceeeeeeeccccCCCCceEEEECCCCCeeEEEEECCHHHHHHHHHHHHHHhc
Confidence 4455555544322 112268999999997 5699999999999999999999874
No 141
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=93.33 E-value=0.19 Score=44.12 Aligned_cols=101 Identities=12% Similarity=0.157 Sum_probs=61.8
Q ss_pred ceeeeEEEeccCCCCCCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccc
Q 006276 292 QTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 371 (652)
Q Consensus 292 ~~~k~G~L~K~~~~~~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (652)
..+++|++....+. ..=+.||++|....+++.... .. .+. +.-
T Consensus 9 ~Ll~q~~f~V~~~~--~k~~eR~vFLFe~~ilf~K~~-~~--~~~--------------------------------~~Y 51 (119)
T 1fho_A 9 RIIRHDAFQVWEGD--EPPKLRYVFLFRNKIMFTEQD-AS--TSP--------------------------------PSY 51 (119)
T ss_dssp CSSEEEEEEECSTT--CSCEEEEEEEETTEEEEEEEC-CS--SSS--------------------------------CCC
T ss_pred CccccCceEEEeCC--CCcceEEEEEecCcEEEEEEe-cC--CCC--------------------------------CcE
Confidence 56889998877543 234679999996666665433 11 000 011
Q ss_pred cccceeecccceeeeCCCCCCCcccEEEEeCC--eeEEE--EeCCHH-HHHHHHHHHHHHHHHh
Q 006276 372 AARHTVNLLTSTIKVDADQSDLRFCFRIISPT--KNYTL--QAESAL-DQMDWIEKITGVIASL 430 (652)
Q Consensus 372 ~~~~~i~l~~~~vk~~~~~~~rrfcF~I~t~~--r~~~l--qA~se~-e~~~Wi~ai~~ai~~~ 430 (652)
.-...|.+....+....++ +-+..|+|..+. ..|++ ||.|.+ ..+.|+..|+..+..+
T Consensus 52 ~~K~~ikl~~~~lte~~~~-~d~~kFeiw~~~~~~~~il~~qA~s~e~~K~~Wv~~I~~~~~~~ 114 (119)
T 1fho_A 52 THYSSIRLDKYNIRQHTTD-EDTIVLQPQEPGLPSFRIKPKDFETSEYVRKAWLRDIAEEQEKY 114 (119)
T ss_dssp SSCCEEESSSCEEEEECTT-CCEEEEECCSTTCCCBCCCCCSSSSCSHHHHHHHHHHHTCCHHH
T ss_pred EEeeEEeeceeEEEecCCC-CCCcEEEEccCCCCceEEEeeecCCcHHHHHHHHHHHHHHHHHH
Confidence 1123344444444432221 225569998776 46888 999999 9999999998865544
No 142
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=93.01 E-value=0.18 Score=47.28 Aligned_cols=54 Identities=15% Similarity=0.185 Sum_probs=41.5
Q ss_pred ceeecccceeeeCCC-CCCCcccEEEEeCC--eeEEEEeCCHHHHHHHHHHHHHHHH
Q 006276 375 HTVNLLTSTIKVDAD-QSDLRFCFRIISPT--KNYTLQAESALDQMDWIEKITGVIA 428 (652)
Q Consensus 375 ~~i~l~~~~vk~~~~-~~~rrfcF~I~t~~--r~~~lqA~se~e~~~Wi~ai~~ai~ 428 (652)
..|.|..|-|.+... ...+..+|||.+++ .+.+|+|.+..+...|+.+|...|.
T Consensus 121 ~~IPLkMayvtR~~~~tD~e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~sni~ 177 (178)
T 2adz_A 121 KHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 177 (178)
T ss_dssp EEEETTTCEEEEECCSSCCSSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHHHHHT
T ss_pred eeecHHHHHHHHhccCCCCCccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHHHhcc
Confidence 456677776554321 11256899999998 5799999999999999999998874
No 143
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=86.58 E-value=51 Score=37.88 Aligned_cols=92 Identities=16% Similarity=0.354 Sum_probs=53.9
Q ss_pred eeeeEEEeccCCCC-CCCceeEEEEEecCceEEEEecCCCCCCCCCCCcccccCcccccccccccccccccCCCCCCccc
Q 006276 293 TIRQGYLSKRSSNL-RGDWKRRFFVLDSRGMLYYYRKQCSKSSGSGSQLSSQRNSSELGSGLLSRWLSSHYHGGVHDEKS 371 (652)
Q Consensus 293 ~~k~G~L~K~~~~~-~~~WkrR~f~L~~~g~l~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (652)
++..|||.....+. ++.=+.+||||....+-| |+++...
T Consensus 540 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------------------------------------- 579 (772)
T 3zvr_A 540 VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSW-YKDDEEK--------------------------------------- 579 (772)
T ss_dssp EEEEEEEEESSSCCC---CCEEEEEEESSEEEE-ESSTTCC---------------------------------------
T ss_pred ceeeeeeeecccccccCCCccceeecccccccc-ccchhhh---------------------------------------
Confidence 78999998765443 456789999999655554 5554321
Q ss_pred cccceeecccceeeeCC-CCCCCcccEEEEeCC--------eeEEEEeCCHHHHHHHHHHHH
Q 006276 372 AARHTVNLLTSTIKVDA-DQSDLRFCFRIISPT--------KNYTLQAESALDQMDWIEKIT 424 (652)
Q Consensus 372 ~~~~~i~l~~~~vk~~~-~~~~rrfcF~I~t~~--------r~~~lqA~se~e~~~Wi~ai~ 424 (652)
.....+.+....++-.. .--.+++.|.|..++ +.+-|.|+|.++.+.|...+-
T Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 641 (772)
T 3zvr_A 580 EKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFL 641 (772)
T ss_dssp CEEEEEECTTEEEEEC-------CEEEEEEETTSSCSBTTBSEEEEEESSHHHHHHHHHHHH
T ss_pred cccccccccccccchhhhccccccccccccCCccccccchhhhhhhhccccccchhhHHhhh
Confidence 01112222222222110 011357889988764 357899999999999998663
No 144
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=78.53 E-value=51 Score=31.99 Aligned_cols=41 Identities=15% Similarity=-0.006 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHh
Q 006276 21 ESAEVLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALETF 61 (652)
Q Consensus 21 ~~le~l~~~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f 61 (652)
.+.+.++..+..+-+.++++......+..+...+..+...|
T Consensus 52 ~~Fe~~~~~f~~~e~~~~~l~k~~k~y~~~~~~~~~~~~~l 92 (251)
T 2fic_A 52 EQFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKL 92 (251)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566666777777777766655444333333333333333
No 145
>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A
Probab=78.12 E-value=1.4 Score=31.66 Aligned_cols=38 Identities=29% Similarity=0.673 Sum_probs=31.3
Q ss_pred CCCccccCCCCC-CCceeeccceeeeccchhhhcccCCC
Q 006276 511 GNDRCADCGAPE-PDWASLNLGVLVCIECSGVHRNLGVH 548 (652)
Q Consensus 511 ~N~~C~dC~~~~-p~w~s~~~gv~~C~~Cs~~Hr~lg~~ 548 (652)
....|++|+... |.|=.-..|..||-.|.-.++..|++
T Consensus 3 ~~~~C~~C~tt~Tp~WR~gp~G~~LCNaCGl~~k~~~~~ 41 (46)
T 1gnf_A 3 EARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQN 41 (46)
T ss_dssp CSCCCTTTCCCCCSSCBCCTTCCCBCSHHHHHHHHTCSC
T ss_pred CCCCCCCcCCCCCCcCccCCCCCccchHHHHHHHHcCCC
Confidence 467899999975 68999889999999998777766643
No 146
>2vut_I AREA, nitrogen regulatory protein AREA; transcription regulation, protein-protein interactions, metal-binding, nitrate assimilation; HET: NAD; 2.3A {Emericella nidulans} SCOP: g.39.1.1 PDB: 2vus_I* 2vuu_I*
Probab=71.09 E-value=2.5 Score=29.82 Aligned_cols=35 Identities=26% Similarity=0.551 Sum_probs=28.8
Q ss_pred CccccCCCCC-CCceeeccceeeeccchhhhcccCC
Q 006276 513 DRCADCGAPE-PDWASLNLGVLVCIECSGVHRNLGV 547 (652)
Q Consensus 513 ~~C~dC~~~~-p~w~s~~~gv~~C~~Cs~~Hr~lg~ 547 (652)
..|++|+... |.|=.-..|..+|-.|.-..+..|+
T Consensus 2 ~~C~~C~tt~Tp~WR~gp~G~~LCNaCGl~~k~~~~ 37 (43)
T 2vut_I 2 TTCTNCFTQTTPLWRRNPEGQPLCNACGLFLKLHGV 37 (43)
T ss_dssp CCCSSSCCCCCSCCEECTTSCEECHHHHHHHHHHSS
T ss_pred CcCCccCCCCCCccccCCCCCcccHHHHHHHHHhCC
Confidence 4799999975 6899998999999999876666553
No 147
>3dfx_A Trans-acting T-cell-specific transcription factor GATA-3; activator, DNA-binding, metal-binding, nucleus; HET: DNA; 2.70A {Mus musculus} PDB: 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A*
Probab=68.17 E-value=2.3 Score=32.66 Aligned_cols=38 Identities=21% Similarity=0.421 Sum_probs=31.1
Q ss_pred CCCCccccCCCCC-CCceeeccceeeeccchhhhcccCC
Q 006276 510 CGNDRCADCGAPE-PDWASLNLGVLVCIECSGVHRNLGV 547 (652)
Q Consensus 510 ~~N~~C~dC~~~~-p~w~s~~~gv~~C~~Cs~~Hr~lg~ 547 (652)
.....|++|+... |.|=.-..|..||-.|.-..+..|+
T Consensus 5 ~~~~~C~~C~tt~Tp~WR~gp~G~~LCNACGl~~~~~~~ 43 (63)
T 3dfx_A 5 RAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNI 43 (63)
T ss_dssp CTTCCCTTTCCSCCSSCCCCTTSCCCCHHHHHHHHHHSS
T ss_pred CCCCcCCCcCCCCCCccCCCCCCCchhhHHHHHHHHcCC
Confidence 3568999999975 6899988999999999876666554
No 148
>4gat_A Nitrogen regulatory protein AREA; DNA binding protein, transcription factor, zinc binding domain, complex (transcription regulation/DNA); HET: DNA; NMR {Emericella nidulans} SCOP: g.39.1.1 PDB: 5gat_A* 6gat_A* 7gat_A*
Probab=67.26 E-value=3.9 Score=31.73 Aligned_cols=37 Identities=27% Similarity=0.573 Sum_probs=30.7
Q ss_pred CCCccccCCCCC-CCceeeccceeeeccchhhhcccCC
Q 006276 511 GNDRCADCGAPE-PDWASLNLGVLVCIECSGVHRNLGV 547 (652)
Q Consensus 511 ~N~~C~dC~~~~-p~w~s~~~gv~~C~~Cs~~Hr~lg~ 547 (652)
....|++|+... |.|-.-.-|..||-.|.-..+..|+
T Consensus 8 ~~~~C~~C~t~~Tp~WR~gp~G~~LCNaCGl~~~~~~~ 45 (66)
T 4gat_A 8 GPTTCTNCFTQTTPLWRRNPEGQPLCNACGLFLKLHGV 45 (66)
T ss_dssp SSCCCTTTCCCCCSSCEEETTTEEECHHHHHHHHHHCS
T ss_pred CCCCCCCCCCCCCCcCCcCCCCCCccHHHHHHHHHcCC
Confidence 468999999974 7999999999999999776666554
No 149
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=64.99 E-value=1.1e+02 Score=29.86 Aligned_cols=23 Identities=0% Similarity=0.196 Sum_probs=16.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Q 006276 114 DLHEVKEARKCFDKASLLYDQAR 136 (652)
Q Consensus 114 di~~~ke~Rk~Fek~~~~YD~al 136 (652)
.+..+..+|+.|+....+++.+.
T Consensus 134 ~~~~l~Kak~~Y~~~c~e~e~~~ 156 (276)
T 2v0o_A 134 ITQALQKSKENYNAKCVEQERLK 156 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566677778887777777654
No 150
>3qwe_A GMIP, GEM-interacting protein; structural genomics consortium, SGC, protein binding; 2.40A {Homo sapiens}
Probab=59.55 E-value=1.4e+02 Score=29.63 Aligned_cols=159 Identities=13% Similarity=0.103 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHhhCC----CCCCCccccCchhHHHHHHHHHHHHHHHHHHH-
Q 006276 22 SAEVLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALETFGGG----HNDPISVAFGGPVMTKFTIALREIGTYKEVLR- 96 (652)
Q Consensus 22 ~le~l~~~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f~~~----~~d~~~~~~~g~~L~~f~~~lkel~~~~~~l~- 96 (652)
=|+.+=.+++.-++.|+.+..-+.+-...+..|+..|..+... +... .. ++.-.-|...+.....+...+.
T Consensus 15 Gv~~lL~r~K~s~~~~Ke~~~flkKRa~lE~E~Ak~L~KLa~~~~~~~~~~-~~---~pl~~i~~~~le~d~~~~~~~~~ 90 (279)
T 3qwe_A 15 GVDAALEYAKTWSRYAKELLAWTEKRASYELEFAKSTMKIAEAGKVSIQQQ-SH---MPLQYIYTLFLEHDLSLGTLAME 90 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CS---CTTHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CC---CcHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555666666666665555554444567777777665421 1100 01 1233344444433333322111
Q ss_pred --HHHHHHHHHHHHHHHHhhhH--------------HHHHHHHHHHHHHHHHHHHHHHHhccccCCC-----------hh
Q 006276 97 --SQVEHMLNDRLLQYVNIDLH--------------EVKEARKCFDKASLLYDQAREKFLSLRKGTK-----------TD 149 (652)
Q Consensus 97 --~~~~~~i~~pL~~f~~~di~--------------~~ke~Rk~Fek~~~~YD~al~ky~s~~K~k~-----------~~ 149 (652)
....+.+.+||..+..+.-+ .+.++=-..+|++..|++.-.-|-.++.... ..
T Consensus 91 ~~~lq~~~~~~~L~~~~~e~ek~RK~~Ke~w~r~eKk~~dae~~l~KAK~~Y~~r~ee~ekak~~~~~~e~~q~~~~~~K 170 (279)
T 3qwe_A 91 TVAQQKRDYYQPLAAKRTEIEKWRKEFKEQWMKEQKRMNEAVQALRRAQLQYVQRSEDLRARSQGSPEDSAPQASPGPSK 170 (279)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC-------------H
T ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccc
Confidence 11224667887776554322 2333444455666666666666644332210 00
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 006276 150 VAAILEEELHSARSAFEQARFSLVTALSNVEAKKR 184 (652)
Q Consensus 150 ~~~E~~~eL~~~Rk~f~~aslDyv~~l~~l~~~k~ 184 (652)
.+.-...+=.++++.=..|..+|-..+.+.+.++.
T Consensus 171 ~lek~r~~EEea~~K~eeAd~~Y~~~V~~a~~~r~ 205 (279)
T 3qwe_A 171 QQERRRRSREEAQAKAQEAEALYQACVREANARQQ 205 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111223555556777788777777776654
No 151
>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A
Probab=58.39 E-value=4.9 Score=34.79 Aligned_cols=37 Identities=30% Similarity=0.705 Sum_probs=29.5
Q ss_pred CCccccCCCC-CCCceeeccceeeeccchhhhcccCCC
Q 006276 512 NDRCADCGAP-EPDWASLNLGVLVCIECSGVHRNLGVH 548 (652)
Q Consensus 512 N~~C~dC~~~-~p~w~s~~~gv~~C~~Cs~~Hr~lg~~ 548 (652)
...|++||+. -|.|-.-.-|-++|..|.-.++..|.+
T Consensus 5 ~~~C~~Cg~~~Tp~WRr~~~g~~lCnaCgl~~Kl~G~n 42 (115)
T 4hc9_A 5 GRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQN 42 (115)
T ss_dssp -CCCTTTCCSCCSSCEECTTSCEECHHHHHHHHHHSSC
T ss_pred CCCCCCCCCccCCcceECCCCCCcCcchhhhhhhcccc
Confidence 4689999996 589999999999999998666654443
No 152
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=56.24 E-value=21 Score=41.44 Aligned_cols=38 Identities=11% Similarity=0.127 Sum_probs=31.4
Q ss_pred cccEEEEeCC-----eeEEEEeCCHHHHHHHHHHHHHHHHHhh
Q 006276 394 RFCFRIISPT-----KNYTLQAESALDQMDWIEKITGVIASLL 431 (652)
Q Consensus 394 rfcF~I~t~~-----r~~~lqA~se~e~~~Wi~ai~~ai~~~l 431 (652)
.-||.|+... +++.|.|.++++.+.|+..|+..+....
T Consensus 96 ~~~fTIvyg~~~~~l~~L~lvA~s~~ea~~Wv~GL~~L~~~~~ 138 (799)
T 2zkm_X 96 LKTLTVVSGPDMVDLTFHNFVSYKENVGKAWAEDVLALVKHPL 138 (799)
T ss_dssp GTEEEEEECSSSSSCEEEEEEESSSSHHHHHHHHHHHHHHCTT
T ss_pred cceEEEEECCCccceeEEEEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 4689999754 2589999999999999999998877554
No 153
>1u5k_A Hypothetical protein; OBD-fold, Zn-binding, recombination,replication; 2.00A {Deinococcus radiodurans} SCOP: b.40.4.13 g.45.1.2 PDB: 1w3s_A 2v1c_C
Probab=54.74 E-value=5 Score=39.38 Aligned_cols=49 Identities=29% Similarity=0.696 Sum_probs=36.0
Q ss_pred cCCCCccccCCCCCCCceeeccceeeeccchhhhcccCCCccceeEeecCCCCCCHHHHHHHHHhch
Q 006276 509 VCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGN 575 (652)
Q Consensus 509 ~~~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~lg~~is~vks~~ld~~~w~~~~i~~~~~~GN 575 (652)
.|.-..|+.||.++..|.+...|.++|..|...+ ..+++.+..|+.+-+
T Consensus 147 ~p~l~~C~~cg~~~~~~fs~~~Gg~~c~~~~~~~------------------~l~~~~l~~l~~l~~ 195 (244)
T 1u5k_A 147 IPQTARCARCGAPDPEHPDPLGGQLLCSKCAALP------------------PYPPAVLDFLRHAVR 195 (244)
T ss_dssp CCCCSBCTTTCCBSCCEECTTTSSEECTTTCSSC------------------CCCHHHHHHHHHTTT
T ss_pred CCCcCccccCCCCCCCcEecccCEEECcccCCCC------------------CCCHHHHHHHHHHHh
Confidence 3566789999998667889999999999995321 145677777765533
No 154
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=53.38 E-value=19 Score=42.12 Aligned_cols=38 Identities=13% Similarity=0.153 Sum_probs=31.3
Q ss_pred cccEEEEeCC-----eeEEEEeCCHHHHHHHHHHHHHHHHHhh
Q 006276 394 RFCFRIISPT-----KNYTLQAESALDQMDWIEKITGVIASLL 431 (652)
Q Consensus 394 rfcF~I~t~~-----r~~~lqA~se~e~~~Wi~ai~~ai~~~l 431 (652)
.-||.|+... +++.|.|.++++.+.|+..|+..+...+
T Consensus 100 ~r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~~~~ 142 (885)
T 3ohm_B 100 EKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAMNIL 142 (885)
T ss_dssp TTEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHHCHH
T ss_pred ccEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHHHHhhhh
Confidence 4689999854 2589999999999999999988776553
No 155
>3qwe_A GMIP, GEM-interacting protein; structural genomics consortium, SGC, protein binding; 2.40A {Homo sapiens}
Probab=49.83 E-value=2.1e+02 Score=28.49 Aligned_cols=113 Identities=10% Similarity=0.051 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHh-------ccccCCChhh-
Q 006276 79 TKFTIALREIGTYKEVLRSQVEHMLNDRLLQYVNIDLHEVKEARKCFDKASLLYDQAREKFL-------SLRKGTKTDV- 150 (652)
Q Consensus 79 ~~f~~~lkel~~~~~~l~~~~~~~i~~pL~~f~~~di~~~ke~Rk~Fek~~~~YD~al~ky~-------s~~K~k~~~~- 150 (652)
.+|.+-+.++..-++.....+-..+. ..++=+.+.+..++.+|..|....++||.+..--. +..-.|..++
T Consensus 97 ~~~~~~L~~~~~e~ek~RK~~Ke~w~-r~eKk~~dae~~l~KAK~~Y~~r~ee~ekak~~~~~~e~~q~~~~~~K~lek~ 175 (279)
T 3qwe_A 97 RDYYQPLAAKRTEIEKWRKEFKEQWM-KEQKRMNEAVQALRRAQLQYVQRSEDLRARSQGSPEDSAPQASPGPSKQQERR 175 (279)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC-------------HHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhHH
Confidence 35666666666666666666655554 34444556678889999999999999997654211 1111222221
Q ss_pred ---HhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Q 006276 151 ---AAILEEELHSARSAFEQARFSLVTALSNVEAKKRFEFLEAVSG 193 (652)
Q Consensus 151 ---~~E~~~eL~~~Rk~f~~aslDyv~~l~~l~~~k~~e~le~l~~ 193 (652)
-.|+.....++-..|...--++-..=+++..- +..+|..|-+
T Consensus 176 r~~EEea~~K~eeAd~~Y~~~V~~a~~~r~eL~~t-k~~~v~~Lr~ 220 (279)
T 3qwe_A 176 RRSREEAQAKAQEAEALYQACVREANARQQDLEIA-KQRIVSHVRK 220 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHH
Confidence 13334445566666655555555555555432 3455555544
No 156
>2kae_A GATA-type transcription factor; zinc finger, GATA-type, DNA; NMR {Caenorhabditis elegans}
Probab=49.07 E-value=5.1 Score=31.51 Aligned_cols=37 Identities=22% Similarity=0.538 Sum_probs=28.5
Q ss_pred CCCccccCCCCC-CCcee--eccceeeeccchhhhcccCCC
Q 006276 511 GNDRCADCGAPE-PDWAS--LNLGVLVCIECSGVHRNLGVH 548 (652)
Q Consensus 511 ~N~~C~dC~~~~-p~w~s--~~~gv~~C~~Cs~~Hr~lg~~ 548 (652)
....|++|+... |.|=. -.-| .||-.|.-..+..|++
T Consensus 7 ~~~~C~nC~tt~Tp~WRrg~~~~g-~LCNACGl~~~~~~~~ 46 (71)
T 2kae_A 7 KSFQCSNCSVTETIRWRNIRSKEG-IQCNACFIYQRKYNKT 46 (71)
T ss_dssp -CCCCSSSCCSCCSSCCCCSSSSC-CCSSHHHHHHHHHHSC
T ss_pred CCCcCCccCCCCCCccccCCCCCC-ccchHHHHHHHHhCCC
Confidence 357899999975 78987 5667 8999998777766643
No 157
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=46.83 E-value=26 Score=40.60 Aligned_cols=38 Identities=24% Similarity=0.262 Sum_probs=30.5
Q ss_pred cccEEEEeCCe-----eEEEEeCCHHHHHHHHHHHHHHHHHhh
Q 006276 394 RFCFRIISPTK-----NYTLQAESALDQMDWIEKITGVIASLL 431 (652)
Q Consensus 394 rfcF~I~t~~r-----~~~lqA~se~e~~~Wi~ai~~ai~~~l 431 (652)
.-||.|+...+ .+.|-|.++++.+.|+..|+..+....
T Consensus 103 ~r~fTIvyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~L~~~~~ 145 (816)
T 3qr0_A 103 DKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYAYNLL 145 (816)
T ss_dssp HHEEEEEECSSSSSCEEEEEEESSHHHHHHHHHHHHHHHTCHH
T ss_pred ccEEEEEECCCcccceEEEEeeCCHHHHHHHHHHHHHHHHHHH
Confidence 46899998642 348999999999999999988775443
No 158
>2z0v_A SH3-containing GRB2-like protein 3; helix bundle, alternative splicing, coiled coil, SH3 domain, endocytosis, structural genomics, NPPSFA; 2.49A {Homo sapiens}
Probab=45.29 E-value=2.1e+02 Score=27.38 Aligned_cols=188 Identities=10% Similarity=0.050 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHhh--C---CCCCCCccccCchhHHHHHHHHHHHHHHH
Q 006276 18 GLEESAEVLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALETFG--G---GHNDPISVAFGGPVMTKFTIALREIGTYK 92 (652)
Q Consensus 18 ~~E~~le~l~~~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f~--~---~~~d~~~~~~~g~~L~~f~~~lkel~~~~ 92 (652)
.++++...|+..++.+.+.|.++...+..+.......-..+..++ + +......+ ......+|.++.+.+...
T Consensus 12 el~~d~~~lE~r~d~~~~~~~~l~k~~~~yl~pn~~~r~~~~~~~~i~k~~~~~k~~~~---~~~~~~L~~~m~~~~~~l 88 (240)
T 2z0v_A 12 KLDDEFLDMERKIDVTNKVVAEILSKTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGY---PQTEGLLGDCMLKYGKEL 88 (240)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHTCCCCCCSSCCCCCCSS---CCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhHHHHHHHHHHHHhccccCCCC---CCcHHHHHHHHHHHHhhc
Confidence 367889999999999999999988875554332221112222121 0 11111111 012333555554443321
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHHHHHHHHHHHhccccCCChhhHhHHHHHHHHHHHHHHHHHHH
Q 006276 93 EVLRSQVEHMLNDRLLQYVNIDLHEVKEARKCFDK-ASLLYDQAREKFLSLRKGTKTDVAAILEEELHSARSAFEQARFS 171 (652)
Q Consensus 93 ~~l~~~~~~~i~~pL~~f~~~di~~~ke~Rk~Fek-~~~~YD~al~ky~s~~K~k~~~~~~E~~~eL~~~Rk~f~~aslD 171 (652)
. -++.+..-|..|-.. ...+-+.+..|+. ++..+=.-+.+++ ..+-.+...+|+.+....+|
T Consensus 89 ~-----~ds~~g~aL~~~g~a-~~~ia~~~~~~~~~v~~~~l~pL~~~l-----------~~d~k~i~~~rKkle~~rLd 151 (240)
T 2z0v_A 89 G-----EDSTFGNALIEVGES-MKLMAEVKDSLDINVKQTFIDPLQLLQ-----------DKDLKEIGHHLKKLEGRRLD 151 (240)
T ss_dssp C-----TTCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTHHHHHHHH-----------HTHHHHHHHHHHHHHHHHHH
T ss_pred C-----CCchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHH
Confidence 1 123333333333332 2333333333332 2222222222222 12234567899999999999
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 006276 172 LVTALSNVEAKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLTYAQQ 225 (652)
Q Consensus 172 yv~~l~~l~~~k~~e~le~l~~~~~aq~~ff~~g~e~~~~l~~~l~el~~~lq~ 225 (652)
|-..-..+...-.-++-+.--.|-.+.-.+.....+++..=-++++.+...++.
T Consensus 152 ~D~ak~k~~k~~eeEl~~A~~~fe~~~e~~~~~m~~~~~~~~e~l~~l~~~v~a 205 (240)
T 2z0v_A 152 YDYKKKRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEA 205 (240)
T ss_dssp HHHHHTTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHHHHHH
T ss_pred HHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 987766543222223333333333333333333333333223444444444433
No 159
>1d4u_A Nucleotide excision repair protein XPA (XPA-MBD); DNA repair, loop-rich domain, relaxation, DNA binding protein; NMR {Homo sapiens} SCOP: a.6.1.2 g.39.1.5 PDB: 1xpa_A
Probab=40.21 E-value=6.6 Score=33.70 Aligned_cols=31 Identities=19% Similarity=0.489 Sum_probs=23.9
Q ss_pred CCCccccCCCCCCC-ceeeccceeeeccchhh
Q 006276 511 GNDRCADCGAPEPD-WASLNLGVLVCIECSGV 541 (652)
Q Consensus 511 ~N~~C~dC~~~~p~-w~s~~~gv~~C~~Cs~~ 541 (652)
+...|.+||...-. |..-+||+-||..|...
T Consensus 4 ~~~~C~eC~~~~~d~~l~~~F~~~VC~~Cr~~ 35 (111)
T 1d4u_A 4 DYVICEECGKEFMDSYLMDHFDLPTCDDCRDA 35 (111)
T ss_dssp CCEECTTTCCEESCSSSTTTTSCCCCTTTCSS
T ss_pred CCCccccCCChhhHHHHHHhCCeeechhhccc
Confidence 45679999986443 34568999999999764
No 160
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=38.82 E-value=4.1e+02 Score=28.74 Aligned_cols=20 Identities=10% Similarity=0.205 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHhhhh
Q 006276 164 AFEQARFSLVTALSNVEAKK 183 (652)
Q Consensus 164 ~f~~aslDyv~~l~~l~~~k 183 (652)
.|.+.+-|+=.+|..|+.+.
T Consensus 107 tynE~S~ELRRrIqyLKekV 126 (562)
T 3ghg_A 107 TYNRVSEDLRSRIEVLKRKV 126 (562)
T ss_dssp HHHHTTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555443
No 161
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=38.73 E-value=3.5e+02 Score=28.41 Aligned_cols=16 Identities=13% Similarity=-0.070 Sum_probs=10.6
Q ss_pred cCCChHHHHHHHHHHH
Q 006276 6 LDDSPMFRKQIQGLEE 21 (652)
Q Consensus 6 ~~DSP~FRasv~~~E~ 21 (652)
..|+|.++..+..+.+
T Consensus 196 ~~~~~~~~~al~~~~~ 211 (471)
T 3mq9_A 196 GVDNAGAKAGLTFLVD 211 (471)
T ss_dssp ESSSHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHH
Confidence 3578887777766633
No 162
>1hs7_A Syntaxin VAM3; UP-and-DOWN three-helix bundle insertion preceding proline in AN alpha-helix, endocytosis/exocytosis complex; NMR {Saccharomyces cerevisiae} SCOP: a.47.2.1
Probab=38.30 E-value=47 Score=27.66 Aligned_cols=30 Identities=20% Similarity=0.174 Sum_probs=25.7
Q ss_pred cCCChHHHHHHH-HHHHHHHHHHHHHHHHHH
Q 006276 6 LDDSPMFRKQIQ-GLEESAEVLRERSLKFYK 35 (652)
Q Consensus 6 ~~DSP~FRasv~-~~E~~le~l~~~l~kl~K 35 (652)
-.|+|.+|..|. .+...+..|.+.++.+..
T Consensus 32 krD~~~LR~~l~~~l~~~~~~L~k~~~~l~~ 62 (97)
T 1hs7_A 32 KRDSKELRYKIETELIPNCTSVRDKIESNIL 62 (97)
T ss_dssp SSCCHHHHHHHHHTHHHHHHHHHHHHHHSTH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 369999999999 999999999998885554
No 163
>3g9m_A Glucocorticoid receptor; glucocorticoid, DNA-binding, allostery, lever ARM, transcription, hormone; HET: DNA; 1.61A {Rattus norvegicus} SCOP: g.39.1.2 PDB: 3g6p_A* 3g6q_B* 3g6r_B* 3g6u_A* 3g8u_A* 3g8x_A* 3g97_B* 3g99_A* 3g9i_A* 3g9j_A* 3fyl_A* 3g9o_B* 3g9p_B* 3g6t_A* 1r4o_A 1r4r_A 1glu_A* 1gdc_A 2gda_A 1rgd_A ...
Probab=37.28 E-value=15 Score=30.10 Aligned_cols=30 Identities=27% Similarity=0.638 Sum_probs=24.3
Q ss_pred CCCccccCCCCCCCceeeccceeeeccchhhhc
Q 006276 511 GNDRCADCGAPEPDWASLNLGVLVCIECSGVHR 543 (652)
Q Consensus 511 ~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr 543 (652)
|+..|.-||.... ...|||+.|..|++.-|
T Consensus 1 g~~~C~VCg~~a~---g~hyGv~sC~~Ck~FFR 30 (90)
T 3g9m_A 1 GSHMCLVCSDEAS---GCHYGVLTCGSCKVFFK 30 (90)
T ss_dssp -CCBCTTTCSBCC---EEETTEEECHHHHHHHH
T ss_pred CCCcCccCCCcCc---ccccCCccchhHhHHhh
Confidence 5678999997653 46899999999999765
No 164
>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A
Probab=37.11 E-value=2.6e+02 Score=29.95 Aligned_cols=26 Identities=8% Similarity=0.132 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh
Q 006276 18 GLEESAEVLRERSLKFYKGCRKYTEG 43 (652)
Q Consensus 18 ~~E~~le~l~~~l~kl~K~~kk~~~~ 43 (652)
.|++.+..++..+..+..+|+.+.++
T Consensus 187 ~f~~~~~~l~~~l~~l~~A~~el~~S 212 (483)
T 2j1d_G 187 KFAERVAEVKPKVEAIRSGSEEVFRS 212 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 57899999999999999999977664
No 165
>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A
Probab=35.60 E-value=1.9e+02 Score=27.27 Aligned_cols=32 Identities=13% Similarity=0.321 Sum_probs=26.8
Q ss_pred ccEEEEeCC-eeEEEEeCCHHHHHHHHHHHHHH
Q 006276 395 FCFRIISPT-KNYTLQAESALDQMDWIEKITGV 426 (652)
Q Consensus 395 fcF~I~t~~-r~~~lqA~se~e~~~Wi~ai~~a 426 (652)
..|.|+... .++.|.|.|+.+...|+.-|+--
T Consensus 116 laFSii~~~~~~L~fvA~s~~~~~~W~DGL~~L 148 (203)
T 3a98_B 116 LAFSILYDSNCQLNFIAPDKHEYCIWTDGLNAL 148 (203)
T ss_dssp GEEEEEETTTEEEEEECSSHHHHHHHHHHHHHH
T ss_pred eEEEEecCCCceEEEecCCHHHHHHHHHHHHHH
Confidence 579988754 68999999999999999977544
No 166
>3plt_A Sphingolipid long chain base-responsive protein L; eisosomes, LSP1, PIL1, BAR domain, plasma membrane, SELF-ASS phosphoprotein; 2.90A {Saccharomyces cerevisiae}
Probab=34.89 E-value=3.2e+02 Score=26.36 Aligned_cols=95 Identities=13% Similarity=0.197 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHhhCCCCCCCccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006276 25 VLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALETFGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLN 104 (652)
Q Consensus 25 ~l~~~l~kl~K~~kk~~~~~~~~~~~~~~f~~~L~~f~~~~~d~~~~~~~g~~L~~f~~~lkel~~~~~~l~~~~~~~i~ 104 (652)
.+...|.+|+|.=|.++.++..+-.....-+.+|...|.+.+|.. .-+..+.+..+.|++.....+.+..+.. =
T Consensus 20 e~sr~L~~LIk~EK~vi~s~e~~are~~~~A~~Ls~WG~~edddl-----~DIsdklgvLl~e~ge~e~~~a~~~d~y-R 93 (234)
T 3plt_A 20 ELARKLSQLVKTEKGVLRAMEVVASERREAAKQLSLWGADNDDDV-----SDVTDKLGVLIYELGELQDQFIDKYDQY-R 93 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 456788899999888887766654444566677766666543322 2378899999999999877777665543 3
Q ss_pred HHHHHHHH--hhhHHHHHHHHHH
Q 006276 105 DRLLQYVN--IDLHEVKEARKCF 125 (652)
Q Consensus 105 ~pL~~f~~--~di~~~ke~Rk~F 125 (652)
..|...++ ..|.+.++.|+..
T Consensus 94 ~~LK~IR~~E~svqp~R~~R~~l 116 (234)
T 3plt_A 94 VTLKSIRNIEASVQPSRDRKEKI 116 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHH
Confidence 34444433 3344444444333
No 167
>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A
Probab=33.79 E-value=25 Score=30.32 Aligned_cols=39 Identities=21% Similarity=0.421 Sum_probs=32.1
Q ss_pred CCCCccccCCCCC-CCceeeccceeeeccchhhhcccCCC
Q 006276 510 CGNDRCADCGAPE-PDWASLNLGVLVCIECSGVHRNLGVH 548 (652)
Q Consensus 510 ~~N~~C~dC~~~~-p~w~s~~~gv~~C~~Cs~~Hr~lg~~ 548 (652)
.....|++|+... |.|-.-..|..||-.|.-..+..|++
T Consensus 57 ~~~~~C~~C~t~~tp~WRr~~~g~~lCNaCgl~~~~~~~~ 96 (115)
T 4hc9_A 57 RAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNIN 96 (115)
T ss_dssp CTTCCCTTTCCSCCSSCEECTTSCEECHHHHHHHHHHSSC
T ss_pred cccccCCCcCCCCcceeEECCCCCCcchHHHHHHHHhCCC
Confidence 3568999999975 79999999999999998766666643
No 168
>1r4i_A Androgen receptor; AR, steroid receptor, protein-DNA complex, transcription/DNA complex; 3.10A {Rattus norvegicus} SCOP: g.39.1.2
Probab=33.30 E-value=18 Score=30.66 Aligned_cols=32 Identities=22% Similarity=0.530 Sum_probs=25.7
Q ss_pred CCCCccccCCCCCCCceeeccceeeeccchhhhcc
Q 006276 510 CGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRN 544 (652)
Q Consensus 510 ~~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~ 544 (652)
+.+..|.-||... ....|||+.|..|++..|-
T Consensus 5 ~~~~~C~VCg~~a---~g~hyGv~sC~aCk~FFRR 36 (105)
T 1r4i_A 5 PPQKTCLICGDEA---SGAHYGALTCGSCKVFFKR 36 (105)
T ss_dssp -CCCBCSSSCSBE---EEEETTEEEEHHHHHHHHH
T ss_pred CCCCCCcEeCCCC---CceEeCCcchhhhhhhhce
Confidence 4567899999753 3678999999999998864
No 169
>1hcq_A Protein (estrogen receptor); protein-DNA complex, complexed with drug, transcription/DNA complex; HET: DNA; 2.40A {Homo sapiens} SCOP: g.39.1.2 PDB: 1hcp_A 4aa6_A
Probab=32.30 E-value=22 Score=28.78 Aligned_cols=31 Identities=23% Similarity=0.544 Sum_probs=25.5
Q ss_pred CCCccccCCCCCCCceeeccceeeeccchhhhcc
Q 006276 511 GNDRCADCGAPEPDWASLNLGVLVCIECSGVHRN 544 (652)
Q Consensus 511 ~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~ 544 (652)
....|.-||.+.. ...||++.|..|++..|-
T Consensus 3 ~~~~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 33 (84)
T 1hcq_A 3 ETRYCAVCNDYAS---GYHYGVWSCEGCKAFFKR 33 (84)
T ss_dssp CCCBCTTTCSBCC---EEETTEEECHHHHHHHHH
T ss_pred CCCcCcEECCCCC---CeeeCccchHHhhhhhhh
Confidence 4578999997643 678999999999998875
No 170
>2p22_C Protein SRN2; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_C 2f66_C
Probab=31.65 E-value=2.6e+02 Score=26.12 Aligned_cols=54 Identities=11% Similarity=0.163 Sum_probs=34.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q 006276 77 VMTKFTIALREIGTYKEVLRSQVEHM-LNDRLLQYVNIDLHEVKEARKCFDKASLLYDQ 134 (652)
Q Consensus 77 ~L~~f~~~lkel~~~~~~l~~~~~~~-i~~pL~~f~~~di~~~ke~Rk~Fek~~~~YD~ 134 (652)
.+.++..++.+...--+.+..++-.. --..+..| |..|++.|+.|...+.+.+.
T Consensus 129 L~~~L~~a~~e~eeeS~~l~~~F~~~~~e~dv~~F----l~~y~~~R~~yH~RreK~~r 183 (192)
T 2p22_C 129 LKKKLEQNTKKLDEESSQLETTTRSIDSADDLDQF----IKNYLDIRTQYHLRREKLAT 183 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCSCCCCHHHHHHH----HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcccchHHHH----HHHHHHHHHHHHHHHHHHHH
Confidence 67888888888888766666554321 01244444 44578888888777766543
No 171
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=31.59 E-value=1.4e+02 Score=21.21 Aligned_cols=38 Identities=16% Similarity=0.211 Sum_probs=29.8
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 006276 207 ELLHQMEPYINQVLTYAQQSRERSNYEQAALNERMQEY 244 (652)
Q Consensus 207 e~~~~l~~~l~el~~~lq~~r~~~~~~~~~l~~~~~~~ 244 (652)
+-.+.++..++.+++...++-.+++..+..|.+++..+
T Consensus 5 ekv~~Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~l 42 (46)
T 3swy_A 5 EKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQL 42 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567888889999999999899988877787776543
No 172
>1oxz_A ADP-ribosylation factor binding protein GGA1; GAT domain, membrane protein; 2.80A {Homo sapiens} SCOP: a.7.8.1
Probab=31.20 E-value=3e+02 Score=25.52 Aligned_cols=86 Identities=10% Similarity=0.071 Sum_probs=50.4
Q ss_pred HHHhccccCCChhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHH-------HHHHH
Q 006276 137 EKFLSLRKGTKTDVAAILEEELHSARSAFEQARFSLVTALSNVEAKKRFEFLEAVSGTMDAHLRYFKQ-------GYELL 209 (652)
Q Consensus 137 ~ky~s~~K~k~~~~~~E~~~eL~~~Rk~f~~aslDyv~~l~~l~~~k~~e~le~l~~~~~aq~~ff~~-------g~e~~ 209 (652)
+++..+-+++.|+-+++ ++.|-.....|.+...+++.+... .++.|+.-+..+..+++.|.. -.+++
T Consensus 36 a~L~eLirs~~PeDL~~-AN~LiK~m~~~d~~r~e~~~k~~~-----eLe~V~~nv~LL~EML~~~~pg~~~~~~d~Ell 109 (186)
T 1oxz_A 36 KMLARLLKSSHPEDLRA-ANKLIKEMVQEDQKRMEKISKRVN-----AIEEVNNNVKLLTEMVMSHSQGGAAAGSSEDLM 109 (186)
T ss_dssp HHHHHHHSCCSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHTSSSCSCTTTTHHHH
T ss_pred HHHHHHhcCCChhhHHH-HHHHHHHHhccchhhHHHHHHHHH-----HHHHHHHHHHHHHHHHHhcCCCccCccccHHHH
Confidence 45566778888887775 567777777788887777765544 223333344444444444422 23555
Q ss_pred hhhHHHHHHHHHHHHHHHH
Q 006276 210 HQMEPYINQVLTYAQQSRE 228 (652)
Q Consensus 210 ~~l~~~l~el~~~lq~~r~ 228 (652)
.+|-...+.++..++++-.
T Consensus 110 ~eL~~~Ck~~qp~i~~Li~ 128 (186)
T 1oxz_A 110 KELYQRCERMRPTLFRLAS 128 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 5555555555555555543
No 173
>1tjl_A DNAK suppressor protein; DKSA, transcription factor, RNA polymerase, stringent response, PPGPP, riken structural genomics/proteomics initiative; 2.00A {Escherichia coli} SCOP: a.2.14.1 g.39.1.13 PDB: 3h3p_S
Probab=31.19 E-value=13 Score=33.83 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=23.9
Q ss_pred CCCCccccCCCCCC-Cceeeccceeeeccchhhhc
Q 006276 510 CGNDRCADCGAPEP-DWASLNLGVLVCIECSGVHR 543 (652)
Q Consensus 510 ~~N~~C~dC~~~~p-~w~s~~~gv~~C~~Cs~~Hr 543 (652)
..-..|.+||.+=| .-.-...++..|+.|...|-
T Consensus 109 g~yg~C~~Cg~~Ip~~Rl~a~P~a~~Ci~Cq~~~E 143 (151)
T 1tjl_A 109 EDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 (151)
T ss_dssp TCCSBCSSSSCBCCHHHHHHCTTCCSCHHHHHHHH
T ss_pred CCCceeCCCCCcchHHHHhcCCCcchhHHHHHHHH
Confidence 45679999999754 12223347889999998653
No 174
>2ebl_A COUP transcription factor 1; DNA-binding, metal-binding, nuclear protein, receptor, transcription regulation, zinc, EAR3, erbal3 tfcoup1; NMR {Homo sapiens}
Probab=30.86 E-value=19 Score=29.46 Aligned_cols=31 Identities=19% Similarity=0.576 Sum_probs=25.3
Q ss_pred CCCccccCCCCCCCceeeccceeeeccchhhhcc
Q 006276 511 GNDRCADCGAPEPDWASLNLGVLVCIECSGVHRN 544 (652)
Q Consensus 511 ~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~ 544 (652)
.+..|.-||.+.. ...|||+.|..|++..|-
T Consensus 6 ~~~~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 36 (89)
T 2ebl_A 6 SGIECVVCGDKSS---GKHYGQFTCEGCKSFFKR 36 (89)
T ss_dssp SSCBCTTTCSBCC---SEETTEECCHHHHHHHHH
T ss_pred CCCCCcEeCCCCc---ceEeCchhhHHhhhhhhe
Confidence 4568999997654 468999999999998864
No 175
>2nll_B Protein (thyroid hormone receptor); complex (transcription regulation/DNA), DNA-binding, nuclear protein, zinc- finger, multigene family; HET: DNA 5IU; 1.90A {Homo sapiens} SCOP: g.39.1.2 PDB: 3m9e_A*
Probab=30.78 E-value=19 Score=30.40 Aligned_cols=29 Identities=24% Similarity=0.702 Sum_probs=23.7
Q ss_pred CccccCCCCCCCceeeccceeeeccchhhhcc
Q 006276 513 DRCADCGAPEPDWASLNLGVLVCIECSGVHRN 544 (652)
Q Consensus 513 ~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~ 544 (652)
..|.-||.+.. ...|||+.|..|++..|-
T Consensus 2 ~~C~VCgd~a~---g~hyGv~sC~aCk~FFRR 30 (103)
T 2nll_B 2 ELCVVCGDKAT---GYHYRCITCEGCKGFFRR 30 (103)
T ss_dssp CBCTTTCSBCC---SEETTEECCHHHHHHHHH
T ss_pred CCCeEeCCcCc---CeecCcccHHHhhhhhee
Confidence 56899997643 568999999999998764
No 176
>2han_B Ecdysone receptor; transcription regulation, transcription factor, DNA-binding, nuclear protein, nuclear receptor, zinc finger; 1.95A {Drosophila melanogaster} SCOP: g.39.1.2 PDB: 1r0o_B 1r0n_B
Probab=29.49 E-value=24 Score=30.60 Aligned_cols=31 Identities=26% Similarity=0.671 Sum_probs=25.4
Q ss_pred CCCccccCCCCCCCceeeccceeeeccchhhhcc
Q 006276 511 GNDRCADCGAPEPDWASLNLGVLVCIECSGVHRN 544 (652)
Q Consensus 511 ~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~ 544 (652)
.+..|.-||.... ...|||+.|..|++..|-
T Consensus 7 ~~~~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 37 (119)
T 2han_B 7 QEELCLVCGDRAS---GYHYNALTCEGCKGFFRR 37 (119)
T ss_dssp CSCBCTTTCSBCC---EEETTEEECHHHHHHHHH
T ss_pred CCCcCeEeCCcCC---cceECchhHHhhHHhhhh
Confidence 3578999997643 679999999999998774
No 177
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=29.17 E-value=26 Score=26.18 Aligned_cols=28 Identities=21% Similarity=0.340 Sum_probs=19.3
Q ss_pred CccccCCCCCCCceeeccceeeeccchhh
Q 006276 513 DRCADCGAPEPDWASLNLGVLVCIECSGV 541 (652)
Q Consensus 513 ~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~ 541 (652)
..|.+||.....+ ...-|..+|..|--|
T Consensus 12 ~~Cp~C~~~~lv~-D~~~ge~vC~~CGlV 39 (58)
T 1dl6_A 12 VTCPNHPDAILVE-DYRAGDMICPECGLV 39 (58)
T ss_dssp CSBTTBSSSCCEE-CSSSCCEECTTTCCE
T ss_pred ccCcCCCCCceeE-eCCCCeEEeCCCCCE
Confidence 4799999865322 235689999999443
No 178
>3dzy_D Peroxisome proliferator-activated receptor gamma; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_D* 3e00_D* 2env_A
Probab=28.01 E-value=22 Score=37.87 Aligned_cols=32 Identities=28% Similarity=0.621 Sum_probs=24.8
Q ss_pred CCCCccccCCCCCCCceeeccceeeeccchhhhcc
Q 006276 510 CGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRN 544 (652)
Q Consensus 510 ~~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~ 544 (652)
..+..|.-||..... ..|||..|..|++..|-
T Consensus 48 ~~~~~C~vC~~~~~g---~hygv~~C~~C~~FFrR 79 (419)
T 3dzy_D 48 LMAIECRVCGDKASG---FHYGVHACEGCKGFFRR 79 (419)
T ss_dssp --CCCCSSSCSCCCS---BCSSSBCCHHHHHHHHH
T ss_pred CCCCcCeECCCcCCC---CccCcccchhhhHHHcc
Confidence 346789999987654 48999999999997653
No 179
>2a66_A Orphan nuclear receptor NR5A2; protein-DNA complex, zinc finger, DNA- binding domain, transcription factor, FTZ-F1, C-terminal extension; 2.20A {Homo sapiens} PDB: 2ff0_A
Probab=27.99 E-value=18 Score=31.05 Aligned_cols=32 Identities=25% Similarity=0.660 Sum_probs=24.3
Q ss_pred CCCCccccCCCCCCCceeeccceeeeccchhhhcc
Q 006276 510 CGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRN 544 (652)
Q Consensus 510 ~~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~ 544 (652)
+.+..|.-||.+. ....|||+.|..|++..|-
T Consensus 7 ~~~~~C~VCgd~a---~G~HyGv~sC~aCk~FFRR 38 (113)
T 2a66_A 7 DLEELCPVCGDKV---SGYHYGLLTCESCKGFFKR 38 (113)
T ss_dssp ---CBCTTTCCBE---EEEETTEEEEHHHHHHHHH
T ss_pred CCCCCCcEeCCCC---cceeeCcccHHHHHHHHhh
Confidence 3457899999753 3678999999999998764
No 180
>2han_A Protein ultraspiracle; transcription regulation, transcription factor, DNA-binding, nuclear protein, nuclear receptor, zinc finger; 1.95A {Drosophila melanogaster} SCOP: g.39.1.2
Probab=27.43 E-value=28 Score=28.73 Aligned_cols=30 Identities=27% Similarity=0.698 Sum_probs=24.8
Q ss_pred CCccccCCCCCCCceeeccceeeeccchhhhcc
Q 006276 512 NDRCADCGAPEPDWASLNLGVLVCIECSGVHRN 544 (652)
Q Consensus 512 N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~ 544 (652)
...|.-||.+.. ...|||+.|..|++..|-
T Consensus 10 ~~~C~VCgd~a~---g~hyGv~sC~aCk~FFRR 39 (93)
T 2han_A 10 KHLCSICGDRAS---GKHYGVYSCEGCKGFFKR 39 (93)
T ss_dssp CCBCTTTCSBCC---EEETTEEECHHHHHHHHH
T ss_pred CCCCcEeCCCCc---CeecCcchhHHHHHHHHh
Confidence 568999997643 569999999999998764
No 181
>1uru_A Amphiphysin; endocytosis, coiled-coil, membrane curvature; 2.6A {Drosophila melanogaster} SCOP: a.238.1.1
Probab=27.33 E-value=3.9e+02 Score=25.07 Aligned_cols=28 Identities=4% Similarity=-0.058 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 006276 20 EESAEVLRERSLKFYKGCRKYTEGLGEG 47 (652)
Q Consensus 20 E~~le~l~~~l~kl~K~~kk~~~~~~~~ 47 (652)
+.+.+.++..++.+-+.++++...+..+
T Consensus 36 D~~fe~~~~~f~~~e~~~~~l~k~~~~y 63 (244)
T 1uru_A 36 DEIFDDHLNNFNRQQASANRLQKEFNNY 63 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455566666666666666665554443
No 182
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=26.80 E-value=2e+02 Score=22.55 Aligned_cols=40 Identities=15% Similarity=0.168 Sum_probs=30.4
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhh
Q 006276 208 LLHQMEPYINQVLTYAQQSRERSNYEQAALNERMQEYKRQ 247 (652)
Q Consensus 208 ~~~~l~~~l~el~~~lq~~r~~~~~~~~~l~~~~~~~~~~ 247 (652)
-...|+..++.|++.+.++..+|+..+.+|.+++..+-.+
T Consensus 8 Kv~~LE~sld~LQTrfARLLaEy~ssQ~KLKqRit~LE~~ 47 (74)
T 3swf_A 8 KVTRMESSVDLLQTRFARILAEYESMQQKLKQRLTKVEKF 47 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467788888888888888888888888888877654333
No 183
>2uzg_A Ubiquitin carboxyl-terminal hydrolase 33; UBL conjugation pathway, DE-ubiquitination, alternative splicing, metal-binding, thiol protease; NMR {Homo sapiens} SCOP: g.44.1.5
Probab=25.96 E-value=37 Score=28.18 Aligned_cols=28 Identities=32% Similarity=0.694 Sum_probs=22.5
Q ss_pred CCCCccccCCCCCCC-ceeec--cceeeecc
Q 006276 510 CGNDRCADCGAPEPD-WASLN--LGVLVCIE 537 (652)
Q Consensus 510 ~~N~~C~dC~~~~p~-w~s~~--~gv~~C~~ 537 (652)
+....|.+|++..+. |+++. .|-+-|.+
T Consensus 23 ~~~~~C~~C~~~~~~lw~CL~~~Cg~vgCgr 53 (97)
T 2uzg_A 23 KSLGTCQDCKVQGPNLWACLENRCSYVGCGE 53 (97)
T ss_dssp HTTTCCSSSCCCCSSCEEECCTTCCCEECCT
T ss_pred CCCCcCcCcCCCCCCceeeecccCCCcccCC
Confidence 456789999966555 99998 99999965
No 184
>1cit_A NGFI-B, protein (orphan nuclear receptor NGFI-B); early immediate response gene product, transcription factor, monomeric protein-DNA complex; HET: DNA; 2.70A {Rattus norvegicus} SCOP: g.39.1.2
Probab=25.95 E-value=34 Score=28.00 Aligned_cols=28 Identities=36% Similarity=0.829 Sum_probs=22.8
Q ss_pred ccccCCCCCCCceeeccceeeeccchhhhcc
Q 006276 514 RCADCGAPEPDWASLNLGVLVCIECSGVHRN 544 (652)
Q Consensus 514 ~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~ 544 (652)
.|.-||.... ...|||+.|..|++..|-
T Consensus 2 ~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 29 (89)
T 1cit_A 2 RCAVCGDNAS---CQHYGVRTCEGCKGFFKR 29 (89)
T ss_dssp CCSSSCCCCC---EEETTEEECHHHHHHHHH
T ss_pred CCeEeCCCCc---ceEeCccchhhhhhhcee
Confidence 5888997643 578999999999998764
No 185
>2jqq_A Conserved oligomeric golgi complex subunit 2; protein, helical bundle, vesicular transport, tethering, protein transport; NMR {Saccharomyces cerevisiae}
Probab=25.62 E-value=4.1e+02 Score=24.73 Aligned_cols=113 Identities=14% Similarity=0.128 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCChhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006276 102 MLNDRLLQYVNIDLHEVKEARKCFDKASLLYDQAREKFLSLRKGTKTDVAAILEEELHSARSAFEQARFSLVTALSNVEA 181 (652)
Q Consensus 102 ~i~~pL~~f~~~di~~~ke~Rk~Fek~~~~YD~al~ky~s~~K~k~~~~~~E~~~eL~~~Rk~f~~aslDyv~~l~~l~~ 181 (652)
.+.+.|.++.+.+|..-+|.-..--.+-++.|...+. +.+...-........+ .-.+|+-++....+..
T Consensus 58 ~F~~QL~qL~~~~i~~Tre~v~d~l~YLkkLD~l~~~---Lq~h~~Lse~l~l~kq--------Ls~sLh~mC~~~pld~ 126 (204)
T 2jqq_A 58 KFMTQLDHLIKDDISNTQEIIKDVLEYLKKLDEIYGS---LRNHSQLTEALSLGKR--------LSKSLHEMCGIEPLEE 126 (204)
T ss_dssp HHHHHHHHHHHHSCSTTHHHHHHHHHHHHHHHHHHHT---CSSSSHHHHHHHHHHH--------HHHHHHHHHTSSCCCH
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHH---HHHHHhHHHHHHHHHH--------HHHHHHHHhCCCCCcH
Confidence 4566777777888776665544444444445544333 3332222222212211 2345566666655666
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhh----HHHHHHHHHHHHHHHHHhHH
Q 006276 182 KKRFEFLEAVSGTMDAHLRYFKQGYELLHQM----EPYINQVLTYAQQSRERSNY 232 (652)
Q Consensus 182 ~k~~e~le~l~~~~~aq~~ff~~g~e~~~~l----~~~l~el~~~lq~~r~~~~~ 232 (652)
..-++++..+.. .+++.+.++..+ .|++..++..-+.+-+.+.-
T Consensus 127 eLc~~l~~qL~~-------L~~~~~~ll~~l~dl~Sp~l~h~RN~yq~i~q~Fqi 174 (204)
T 2jqq_A 127 EICSGLIEQLYK-------LITASRRILESCADSNSPYIHHLRNDYQDLLQEFQI 174 (204)
T ss_dssp HHHHHHHHHHHH-------HHHHHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-------HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH
Confidence 666666666655 455555555443 67887777666666555553
No 186
>4glq_A Methyl-accepting chemotaxis protein; chromophore, phytochrome, cyanobacteriochrome, phycoviolobil bilin, BILI-protein; HET: PVN; 1.77A {Thermosynechococcus elongatus} PDB: 4fof_A*
Probab=25.10 E-value=43 Score=30.39 Aligned_cols=41 Identities=17% Similarity=0.245 Sum_probs=32.4
Q ss_pred cceeeeccchhhhcccCCCccceeEeecCCCCCCHHHHHHHHHhchHHHHHHHHhhccc
Q 006276 530 LGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQS 588 (652)
Q Consensus 530 ~gv~~C~~Cs~~Hr~lg~~is~vks~~ld~~~w~~~~i~~~~~~GN~~~n~~~e~~~~~ 588 (652)
+|++.|..|..-+ .|+++|+++++.+++..+-.+--+.+-.
T Consensus 119 ~GlL~~~~~~~~r------------------~w~~~ei~ll~~lA~ql~iAi~qa~l~~ 159 (171)
T 4glq_A 119 FGLLIAHQASEPR------------------QWQEIEIDQFSELASTGSLVLERLHFLE 159 (171)
T ss_dssp EEEEEEEEESSCC------------------CCCHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred EEEEEEEeCCCCC------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5888888885421 6999999999999999999998887765
No 187
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=24.81 E-value=1.1e+02 Score=28.03 Aligned_cols=41 Identities=15% Similarity=0.242 Sum_probs=33.6
Q ss_pred cccEEEEeCCeeEEEEeCCHHHHHHHHHHHHHHHHHhhccCC
Q 006276 394 RFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQA 435 (652)
Q Consensus 394 rfcF~I~t~~r~~~lqA~se~e~~~Wi~ai~~ai~~~l~~~~ 435 (652)
...|.|.. +|+|+.+|++..|+..+|..|-....+.+....
T Consensus 115 ~~gF~ltl-~K~Y~W~a~s~~Er~~FI~sL~K~y~ky~~G~~ 155 (171)
T 3hie_A 115 SEGFILTM-SKKYYWETNSAKERTVFIKSLITLYIQTFEGHV 155 (171)
T ss_dssp TTEEEEES-SSEEEEECSSHHHHHHHHHHHHHHHHHTSCSSC
T ss_pred CCcEEEEe-CCeEEEecCCHHHHHHHHHHHHHHHHHHcCCCC
Confidence 45688777 699999999999999999999888777764433
No 188
>1naf_A ADP-ribosylation factor binding protein GGA1, golgi-localized, gamma EAR-; clathrin-adaptor, GAT domain, helical paper-CLIP, three-helix bundle; 2.80A {Homo sapiens} SCOP: a.7.8.1
Probab=24.69 E-value=3e+02 Score=24.87 Aligned_cols=85 Identities=12% Similarity=0.095 Sum_probs=47.9
Q ss_pred HHHhccccCCChhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHH-------HHHH
Q 006276 137 EKFLSLRKGTKTDVAAILEEELHSARSAFEQARFSLVTALSNVEAKKRFEFLEAVSGTMDAHLRYFKQG-------YELL 209 (652)
Q Consensus 137 ~ky~s~~K~k~~~~~~E~~~eL~~~Rk~f~~aslDyv~~l~~l~~~k~~e~le~l~~~~~aq~~ff~~g-------~e~~ 209 (652)
+++..+-|++.|+-+++ ++.|-.....|.+...+++.+... .++.++.-+..+..+++.|..| .+++
T Consensus 20 ~~L~~Lirs~~PeDL~~-AN~LiK~m~~~d~~r~e~~~k~~s-----eLe~V~~nv~LL~EML~~~~pg~~~~~~d~Ell 93 (158)
T 1naf_A 20 KMLARLLKSSHPEDLRA-ANKLIKEMVQEDQKRMEKISKRVN-----AIEEVNNNVKLLTEMVMSHSQGGAAAGSSEDLM 93 (158)
T ss_dssp HHHHHHHSSCSTTHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHTTTC-----CCTTHH
T ss_pred HHHHHHHhcCChhhHHH-HHHHHHHHhccchhhHHHHHHHHH-----HHHHHHHHHHHHHHHHHhcCCCcCCCcccHHHH
Confidence 35566777888887775 467777777888887887765544 2233333333344444444221 1444
Q ss_pred hhhHHHHHHHHHHHHHHH
Q 006276 210 HQMEPYINQVLTYAQQSR 227 (652)
Q Consensus 210 ~~l~~~l~el~~~lq~~r 227 (652)
.+|-...+.++..++++.
T Consensus 94 ~eL~~~Ck~~qp~i~~Li 111 (158)
T 1naf_A 94 KELYQRCERMRPTLFRLA 111 (158)
T ss_dssp HHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 444444455555555544
No 189
>1dsz_A RAR-alpha, retinoic acid receptor alpha; RAR, nuclear receptor, protein-DNA, transcription/DNA complex; HET: DNA; 1.70A {Homo sapiens} SCOP: g.39.1.2 PDB: 1hra_A
Probab=24.53 E-value=29 Score=28.20 Aligned_cols=29 Identities=28% Similarity=0.654 Sum_probs=23.3
Q ss_pred CccccCCCCCCCceeeccceeeeccchhhhcc
Q 006276 513 DRCADCGAPEPDWASLNLGVLVCIECSGVHRN 544 (652)
Q Consensus 513 ~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~ 544 (652)
..|.-||.+.. ...|||+.|..|++..|-
T Consensus 5 ~~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 33 (86)
T 1dsz_A 5 KPCFVCQDKSS---GYHYGVSACEGCKGFFRR 33 (86)
T ss_dssp -CCTTTCSCCC---SEETTEECCHHHHHHHHH
T ss_pred CCCcEECCCcc---ceeeCchhHHHHHHHHHH
Confidence 46999997654 468999999999998874
No 190
>2ovc_A Potassium voltage-gated channel subfamily KQT MEM; potassium channel, ION channel assemb coiled-coil, tetramer, transport protein; 2.07A {Homo sapiens}
Probab=24.41 E-value=89 Score=20.58 Aligned_cols=29 Identities=7% Similarity=0.064 Sum_probs=24.1
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006276 7 DDSPMFRKQIQGLEESAEVLRERSLKFYK 35 (652)
Q Consensus 7 ~DSP~FRasv~~~E~~le~l~~~l~kl~K 35 (652)
.+.++.=+.++..|.++..+++.|+-++.
T Consensus 3 ~~~~Sm~~Rl~kVE~qv~~md~KLd~l~~ 31 (33)
T 2ovc_A 3 VDEISMMGRVVKVEKQVQSIEHKLDLLLG 31 (33)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677788999999999999999988764
No 191
>1a6y_A Orphan nuclear receptor NR1D1; orphan receptor, DNA-binding, reverb, REV- ERB, transcription regulation, transcription/DNA complex; HET: DNA 5IU; 2.30A {Homo sapiens} SCOP: g.39.1.2 PDB: 1ga5_A* 1hlz_A
Probab=24.23 E-value=30 Score=28.62 Aligned_cols=30 Identities=33% Similarity=0.723 Sum_probs=24.2
Q ss_pred CCccccCCCCCCCceeeccceeeeccchhhhcc
Q 006276 512 NDRCADCGAPEPDWASLNLGVLVCIECSGVHRN 544 (652)
Q Consensus 512 N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~ 544 (652)
...|.-||.+.. ...|||+.|..|++..|-
T Consensus 7 ~~~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 36 (94)
T 1a6y_A 7 VLLCKVCGDVAS---GFHYGVLACEGCKGFFRR 36 (94)
T ss_dssp -CBCTTTSSBCC---EEETTEEECHHHHHHHHH
T ss_pred CCcCcEeCCCCc---ceEeCccchhhhhhehhe
Confidence 467999997643 578999999999998774
No 192
>1ynw_B Retinoic acid receptor RXR-alpha, retinoid X receptor; VDR, nuclear receptor, protein-DNA complex, transcripti complex; 3.00A {Homo sapiens} SCOP: g.39.1.2
Probab=24.08 E-value=27 Score=29.22 Aligned_cols=30 Identities=30% Similarity=0.712 Sum_probs=23.3
Q ss_pred CCccccCCCCCCCceeeccceeeeccchhhhcc
Q 006276 512 NDRCADCGAPEPDWASLNLGVLVCIECSGVHRN 544 (652)
Q Consensus 512 N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~ 544 (652)
...|.-||.+.. ...|||+.|..|++..|-
T Consensus 3 ~~~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 32 (99)
T 1ynw_B 3 KHICAICGDRSS---GKHYGVYSCEGCKGFFKR 32 (99)
T ss_dssp --CBTTTBSCCC---BCCTTSCBCSHHHHHHHH
T ss_pred CCCCceeCCCCc---ceeeCccchHHHHHHHHh
Confidence 357999997653 568999999999998764
No 193
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=23.38 E-value=6.3e+02 Score=26.08 Aligned_cols=23 Identities=22% Similarity=0.327 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 006276 81 FTIALREIGTYKEVLRSQVEHML 103 (652)
Q Consensus 81 f~~~lkel~~~~~~l~~~~~~~i 103 (652)
|.+...+|.....-|-..++..|
T Consensus 111 ~~e~s~eLe~~i~~lk~~V~~q~ 133 (390)
T 1deq_A 111 FKQINEDLRSRIEILRRKVIEQV 133 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444445554444444444443
No 194
>1lo1_A Steroid hormone receptor ERR2; estrogen related receptor 2, DNA binding domain, HERR2, hormone nuclear receptor; NMR {Homo sapiens} SCOP: g.39.1.2
Probab=23.33 E-value=23 Score=29.62 Aligned_cols=30 Identities=23% Similarity=0.607 Sum_probs=24.6
Q ss_pred CCccccCCCCCCCceeeccceeeeccchhhhcc
Q 006276 512 NDRCADCGAPEPDWASLNLGVLVCIECSGVHRN 544 (652)
Q Consensus 512 N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~ 544 (652)
...|.-||.... ...|||+.|..|++..|-
T Consensus 4 ~~~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 33 (98)
T 1lo1_A 4 KRLCLVCGDIAS---GYHYGVASCEACKAFFKR 33 (98)
T ss_dssp CCEETTTTEECS---EESSSSEECHHHHHHHHH
T ss_pred CCCCcEeCCCCc---CeeeCccchhhhhhhhee
Confidence 467999997643 568999999999998874
No 195
>1kb2_A Vitamin D3 receptor; VDR, nuclear receptor, protein-DNA complex, transcription/DNA complex; 2.70A {Homo sapiens} SCOP: g.39.1.2 PDB: 1kb4_A 1kb6_A 1ynw_A
Probab=23.23 E-value=29 Score=29.57 Aligned_cols=30 Identities=23% Similarity=0.696 Sum_probs=24.1
Q ss_pred CCccccCCCCCCCceeeccceeeeccchhhhcc
Q 006276 512 NDRCADCGAPEPDWASLNLGVLVCIECSGVHRN 544 (652)
Q Consensus 512 N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~ 544 (652)
...|.-||.... ...|||+.|..|++..|-
T Consensus 6 ~~~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 35 (110)
T 1kb2_A 6 PRICGVCGDRAT---GFHFNAMTCEGCKGFFRR 35 (110)
T ss_dssp -CBCTTTCSBCC---SEETTEECCHHHHHHHHH
T ss_pred CCCCcEeCCCCC---ceEeCchhHhhhhhhhee
Confidence 367999997654 468999999999998774
No 196
>2kgo_A Uncharacterized protein YBII; Zn finger, partially disordered, structural proteomics, META binding, zinc-finger, structural genomics; NMR {Escherichia coli}
Probab=22.61 E-value=8.9 Score=32.72 Aligned_cols=32 Identities=38% Similarity=0.784 Sum_probs=23.0
Q ss_pred CCccccCCCCCC-Cceeeccceeeeccchhhhc
Q 006276 512 NDRCADCGAPEP-DWASLNLGVLVCIECSGVHR 543 (652)
Q Consensus 512 N~~C~dC~~~~p-~w~s~~~gv~~C~~Cs~~Hr 543 (652)
-..|.+||.+=| .-.-...++..|+.|...+-
T Consensus 56 yG~C~~CGe~Ip~~RL~A~P~a~~Cv~Cq~~~E 88 (108)
T 2kgo_A 56 LDECEECGAPIPQARREAIPGVRLCIHCQQEKD 88 (108)
T ss_dssp CSBCTTTCCBCCHHHHHHSTTCCSCHHHHHHHH
T ss_pred CceecccCCcccHHHHhcCCCccccHHHHHHHH
Confidence 579999999754 22223447889999998664
No 197
>1dsz_B RXR-alpha, retinoic acid receptor RXR-alpha; RAR, nuclear receptor, protein-DNA, transcription/DNA complex; HET: DNA; 1.70A {Homo sapiens} SCOP: g.39.1.2 PDB: 1by4_A* 1rxr_A 1r0n_A 1r0o_A 2nll_A*
Probab=22.43 E-value=24 Score=28.65 Aligned_cols=31 Identities=29% Similarity=0.678 Sum_probs=24.9
Q ss_pred CCCccccCCCCCCCceeeccceeeeccchhhhcc
Q 006276 511 GNDRCADCGAPEPDWASLNLGVLVCIECSGVHRN 544 (652)
Q Consensus 511 ~N~~C~dC~~~~p~w~s~~~gv~~C~~Cs~~Hr~ 544 (652)
.+..|.-||.+.. ...|||+.|..|++..|-
T Consensus 4 ~~~~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 34 (85)
T 1dsz_B 4 TKHICAICGDRSS---GKHYGVYSCEGCKGFFKR 34 (85)
T ss_dssp CCEECTTTCCEES---SEETTEECCHHHHHHHHH
T ss_pred CCCCCCEeCCCCC---ceeeCccchHHHHHHHHH
Confidence 3567999997643 458999999999998764
No 198
>3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D
Probab=22.11 E-value=4.2e+02 Score=28.12 Aligned_cols=36 Identities=14% Similarity=0.379 Sum_probs=26.6
Q ss_pred CChHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHhhh
Q 006276 8 DSPMFRKQIQ------GLEESAEVLRERSLKFYKGCRKYTEG 43 (652)
Q Consensus 8 DSP~FRasv~------~~E~~le~l~~~l~kl~K~~kk~~~~ 43 (652)
+=|.++..|+ .|++.+..++..|..+..+|+.+.++
T Consensus 160 ~Ip~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~A~~~l~~S 201 (457)
T 3obv_E 160 TVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKS 201 (457)
T ss_dssp SSTTHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHTC
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3455555443 57888999999999999999877654
No 199
>2xi5_A RNA polymerase L, L-protein; transferase, bunyaviridae, orthobunyavirus, aedes triseriatu hydrolase; 2.20A {Bunyavirus la crosse} PDB: 2xi7_A*
Probab=21.91 E-value=1.2e+02 Score=27.81 Aligned_cols=60 Identities=18% Similarity=0.234 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhccccCCChhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 006276 130 LLYDQAREKFLSLRKGTKTDVAAILEEELHSARSAFEQARFSLVTALSNVEAKKRFEFLEAVSGTM 195 (652)
Q Consensus 130 ~~YD~al~ky~s~~K~k~~~~~~E~~~eL~~~Rk~f~~aslDyv~~l~~l~~~k~~e~le~l~~~~ 195 (652)
..|+..++|- ...+.|+.+.+...+|..+|..|-.. +++..|+- +.|.++.+-+.+++|+
T Consensus 5 ~~~~q~~~RI---~~~~~~~~AKDI~~Dll~~RHDyFGr--e~c~~L~i-eyRnDV~~~dilld~l 64 (184)
T 2xi5_A 5 QEYQQFLARI---NTARDACVAKDIDVDLLMARHDYFGR--ELCKSLNI-EYRNDVPFIDIILDIR 64 (184)
T ss_dssp HHHHHHHHHH---HHCCSHHHHHHHHHHHHHHHHHHHHH--HHHHHHTC-CCCSSCCHHHHHHHHS
T ss_pred HHHHHHHHHH---HccCChhHHHhHHHHHHHHHhHHHHH--HHHHHcCc-hhccCCcHHHHHHHHc
Confidence 3566666774 34557888888899999999999655 56666655 8898988888877644
Done!