BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006277
(652 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 255 bits (652), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 126/247 (51%), Positives = 161/247 (65%), Gaps = 5/247 (2%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSW--IDDQ 82
YK D +EVAWC+++ + +S + +R E LK L+H NI+RFY+SW
Sbjct: 43 YKGLDTETTVEVAWCELQDRKLTKS--ERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKG 100
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K + ++TEL TSG+L+ Y W RQIL GL +LH+ PPIIHRDLKCD
Sbjct: 101 KKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCD 160
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDENYNELADIYSFGMCML 202
NIFI G G VKIGDLGLAT+ + AK+VIGTPEF APE Y+E Y+E D+Y+FG C L
Sbjct: 161 NIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEXYEEKYDESVDVYAFGXCXL 220
Query: 203 EMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKEL 261
E T EYPYSEC+N+AQIY++V+SG+KPA+ KV PEVK IE C+ +R S K+L
Sbjct: 221 EXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL 280
Query: 262 LMDPFLQ 268
L F Q
Sbjct: 281 LNHAFFQ 287
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 123/248 (49%), Gaps = 18/248 (7%)
Query: 40 QVRIDDVLQSPEDLER----LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTS 95
QVRI + + PE R L+ E+ L K LKH NI+++ S+ +N + I E
Sbjct: 47 QVRIA-IKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF--SENGFIKIFMEQVPG 103
Query: 96 GSLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE 152
GSL + + + +QIL GL YLH D I+HRD+K DN+ IN G
Sbjct: 104 GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH--DNQIVHRDIKGDNVLINTYSGV 161
Query: 153 VKIGDLGLATIMEQAN--AKSVIGTPEFMAPELYDE---NYNELADIYSFGMCMLEMVTF 207
+KI D G + + N ++ GT ++MAPE+ D+ Y + ADI+S G ++EM T
Sbjct: 162 LKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 221
Query: 208 EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELLMDPF 266
+ P+ E KV + + E K+FI KC P +R A +LL+D F
Sbjct: 222 KPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEF 281
Query: 267 LQVNGTTK 274
L+V+ K
Sbjct: 282 LKVSSKKK 289
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 113/222 (50%), Gaps = 14/222 (6%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
E + EV ++K L+H NI+ F + Q ++I+TE + GSL YR
Sbjct: 76 ERVNEFLREVAIMKRLRHPNIVLFMGA--VTQPPNLSIVTEYLSRGSL--YRLLHKSGAR 131
Query: 111 XX-----XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME 165
A + G+ YLH+ +PPI+HR+LK N+ ++ + VK+ D GL+ +
Sbjct: 132 EQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVD-KKYTVKVCDFGLSRLKA 190
Query: 166 QA--NAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 222
++KS GTPE+MAPE L DE NE +D+YSFG+ + E+ T + P+ N AQ+
Sbjct: 191 STFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL-NPAQVVA 249
Query: 223 KVSSGIKPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMD 264
V K + + +P+V + IE C + + +MD
Sbjct: 250 AVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD 291
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 14/222 (6%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
E + EV ++K L+H NI+ F + Q ++I+TE + GSL YR
Sbjct: 76 ERVNEFLREVAIMKRLRHPNIVLFMGA--VTQPPNLSIVTEYLSRGSL--YRLLHKSGAR 131
Query: 111 XX-----XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME 165
A + G+ YLH+ +PPI+HRDLK N+ ++ + VK+ D GL+ +
Sbjct: 132 EQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVD-KKYTVKVCDFGLSRLKA 190
Query: 166 QA--NAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYK 222
+K GTPE+MAPE L DE NE +D+YSFG+ + E+ T + P+ N AQ+
Sbjct: 191 SXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL-NPAQVVA 249
Query: 223 KVSSGIKPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMD 264
V K + + +P+V + IE C + + +MD
Sbjct: 250 AVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD 291
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 124/239 (51%), Gaps = 14/239 (5%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNK 84
Y+A ++G+ VA +V+I D++ + + + E+ LLK L H N+I++Y S+I+D
Sbjct: 49 YRAACLLDGVPVALKKVQIFDLMDAKARADCI-KEIDLLKQLNHPNVIKYYASFIEDNE- 106
Query: 85 TVNIITELFTSGSL----RQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLK 140
+NI+ EL +G L + ++ + Q+ S L ++HS ++HRD+K
Sbjct: 107 -LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR--VMHRDIK 163
Query: 141 CDNIFINGNQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAPELYDEN-YNELADIYSF 197
N+FI G VK+GDLGL + A S++GTP +M+PE EN YN +DI+S
Sbjct: 164 PANVFITAT-GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSL 222
Query: 198 GMCMLEMVTFEYP-YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVPASQR 255
G + EM + P Y + N + KK+ P S E++ + C+ P ++
Sbjct: 223 GCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEK 281
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 120/242 (49%), Gaps = 18/242 (7%)
Query: 40 QVRIDDVLQSPEDLER----LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTS 95
QVRI + + PE R L+ E+ L K LKH NI+++ S+ +N + I E
Sbjct: 33 QVRIA-IKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF--SENGFIKIFMEQVPG 89
Query: 96 GSLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE 152
GSL + + + +QIL GL YLH D I+HRD+K DN+ IN G
Sbjct: 90 GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH--DNQIVHRDIKGDNVLINTYSGV 147
Query: 153 VKIGDLGLATIMEQAN--AKSVIGTPEFMAPELYDE---NYNELADIYSFGMCMLEMVTF 207
+KI D G + + N ++ GT ++MAPE+ D+ Y + ADI+S G ++EM T
Sbjct: 148 LKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 207
Query: 208 EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELLMDPF 266
+ P+ E KV + + E K+FI KC P +R A +LL+D F
Sbjct: 208 KPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEF 267
Query: 267 LQ 268
L+
Sbjct: 268 LK 269
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 127/256 (49%), Gaps = 26/256 (10%)
Query: 23 SGYKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQ 82
S YKA + G VA QV ++ DL+ + E+ +++ +++++Y S+ +
Sbjct: 44 SVYKAIHKETGQIVAIKQVPVES------DLQEIIKEISIMQQCDSPHVVKYYGSYF--K 95
Query: 83 NKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
N + I+ E +GS+ R + L GL YLH IHRD+K
Sbjct: 96 NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK--IHRDIKA 153
Query: 142 DNIFINGNQGEVKIGDLGLATIMEQANAK--SVIGTPEFMAPELYDE-NYNELADIYSFG 198
NI +N +G K+ D G+A + AK VIGTP +MAPE+ E YN +ADI+S G
Sbjct: 154 GNILLN-TEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLG 212
Query: 199 MCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKS-----FIEKCLVPA- 252
+ +EM + PY++ I+ + + P + PE+ S F+++CLV +
Sbjct: 213 ITAIEMAEGKPPYADIHPMRAIF-MIPTNPPPT----FRKPELWSDNFTDFVKQCLVKSP 267
Query: 253 SQRLSAKELLMDPFLQ 268
QR +A +LL PF++
Sbjct: 268 EQRATATQLLQHPFVR 283
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 124/253 (49%), Gaps = 22/253 (8%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNK 84
Y A D G EVA +R ++ Q P+ E + +E+ +++ K+ NI+ + +S++
Sbjct: 37 YTAMDVATGQEVA---IRQMNLQQQPKK-ELIINEILVMRENKNPNIVNYLDSYL--VGD 90
Query: 85 TVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNI 144
+ ++ E GSL R+ L L +LHS+ +IHRD+K DNI
Sbjct: 91 ELWVVMEYLAGGSLTDV-VTETCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNI 147
Query: 145 FINGNQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAPELYDEN-YNELADIYSFGMCM 201
+ G G VK+ D G + EQ+ +++GTP +MAPE+ Y DI+S G+
Sbjct: 148 LL-GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA 206
Query: 202 LEMVTFEYPYSECRNSAQIYKKVSSGI----KPAALSKVKDPEVKSFIEKCL-VPASQRL 256
+EM+ E PY +Y ++G P LS + + F+ +CL + +R
Sbjct: 207 IEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI----FRDFLNRCLDMDVEKRG 262
Query: 257 SAKELLMDPFLQV 269
SAKELL FL++
Sbjct: 263 SAKELLQHQFLKI 275
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 22/253 (8%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNK 84
Y A D G EVA +R ++ Q P+ E + +E+ +++ K+ NI+ + +S++
Sbjct: 37 YTAMDVATGQEVA---IRQMNLQQQPKK-ELIINEILVMRENKNPNIVNYLDSYL--VGD 90
Query: 85 TVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNI 144
+ ++ E GSL R+ L L +LHS+ +IHRD+K DNI
Sbjct: 91 ELWVVMEYLAGGSLTDV-VTETCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNI 147
Query: 145 FINGNQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAPELYDEN-YNELADIYSFGMCM 201
+ G G VK+ D G + EQ+ ++GTP +MAPE+ Y DI+S G+
Sbjct: 148 LL-GMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA 206
Query: 202 LEMVTFEYPYSECRNSAQIYKKVSSGI----KPAALSKVKDPEVKSFIEKCL-VPASQRL 256
+EM+ E PY +Y ++G P LS + + F+ +CL + +R
Sbjct: 207 IEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI----FRDFLNRCLDMDVEKRG 262
Query: 257 SAKELLMDPFLQV 269
SAKELL FL++
Sbjct: 263 SAKELLQHQFLKI 275
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 22/253 (8%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNK 84
Y A D G EVA +R ++ Q P+ E + +E+ +++ K+ NI+ + +S++
Sbjct: 37 YTAMDVATGQEVA---IRQMNLQQQPKK-ELIINEILVMRENKNPNIVNYLDSYL--VGD 90
Query: 85 TVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNI 144
+ ++ E GSL R+ L L +LHS+ +IHRD+K DNI
Sbjct: 91 ELWVVMEYLAGGSLTDV-VTETCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNI 147
Query: 145 FINGNQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAPELYDEN-YNELADIYSFGMCM 201
+ G G VK+ D G + EQ+ ++GTP +MAPE+ Y DI+S G+
Sbjct: 148 LL-GMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA 206
Query: 202 LEMVTFEYPYSECRNSAQIYKKVSSGI----KPAALSKVKDPEVKSFIEKCL-VPASQRL 256
+EM+ E PY +Y ++G P LS + + F+ +CL + +R
Sbjct: 207 IEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI----FRDFLNRCLEMDVEKRG 262
Query: 257 SAKELLMDPFLQV 269
SAKELL FL++
Sbjct: 263 SAKELLQHQFLKI 275
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 114/226 (50%), Gaps = 20/226 (8%)
Query: 56 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXG 115
L SEV+LL+ LKH NI+R+Y+ ID N T+ I+ E G L
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 116 WARQILSGLIY----LHSHD---PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--EQ 166
+ ++++ L H ++HRDLK N+F++G Q VK+GD GLA I+ +
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN-VKLGDFGLARILNHDT 170
Query: 167 ANAKSVIGTPEFMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
+ AK+ +GTP +M+PE + +YNE +DI+S G + E+ P+ +A K+++
Sbjct: 171 SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF-----TAFSQKELA 225
Query: 226 SGIKPAALSKV---KDPEVKSFIEKCL-VPASQRLSAKELLMDPFL 267
I+ ++ E+ I + L + R S +E+L +P +
Sbjct: 226 GKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 114/226 (50%), Gaps = 20/226 (8%)
Query: 56 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXG 115
L SEV+LL+ LKH NI+R+Y+ ID N T+ I+ E G L
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 116 WARQILSGLIY----LHSHD---PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--EQ 166
+ ++++ L H ++HRDLK N+F++G Q VK+GD GLA I+ +
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN-VKLGDFGLARILNHDT 170
Query: 167 ANAKSVIGTPEFMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
+ AK+ +GTP +M+PE + +YNE +DI+S G + E+ P+ +A K+++
Sbjct: 171 SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF-----TAFSQKELA 225
Query: 226 SGIKPAALSKV---KDPEVKSFIEKCL-VPASQRLSAKELLMDPFL 267
I+ ++ E+ I + L + R S +E+L +P +
Sbjct: 226 GKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 22/253 (8%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNK 84
Y A D G EVA +R ++ Q P+ E + +E+ +++ K+ NI+ + +S++
Sbjct: 38 YTAMDVATGQEVA---IRQMNLQQQPKK-ELIINEILVMRENKNPNIVNYLDSYL--VGD 91
Query: 85 TVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNI 144
+ ++ E GSL R+ L L +LHS+ +IHRD+K DNI
Sbjct: 92 ELWVVMEYLAGGSLTDV-VTETCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNI 148
Query: 145 FINGNQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAPELYDEN-YNELADIYSFGMCM 201
+ G G VK+ D G + EQ+ ++GTP +MAPE+ Y DI+S G+
Sbjct: 149 LL-GMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA 207
Query: 202 LEMVTFEYPYSECRNSAQIYKKVSSGI----KPAALSKVKDPEVKSFIEKCL-VPASQRL 256
+EM+ E PY +Y ++G P LS + + F+ +CL + +R
Sbjct: 208 IEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI----FRDFLNRCLEMDVEKRG 263
Query: 257 SAKELLMDPFLQV 269
SAKEL+ FL++
Sbjct: 264 SAKELIQHQFLKI 276
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 109/225 (48%), Gaps = 16/225 (7%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXX 113
E L++EV +++ +H N++ YNS++ + ++ E G+L
Sbjct: 193 ELLFNEVVIMRDYQHENVVEMYNSYL--VGDELWVVMEFLEGGALTDI-VTHTRMNEEQI 249
Query: 114 XGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--EQANAKS 171
+L L LH+ +IHRD+K D+I + + G VK+ D G + E K
Sbjct: 250 AAVCLAVLQALSVLHAQG--VIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKX 306
Query: 172 VIGTPEFMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKP 230
++GTP +MAPEL Y DI+S G+ ++EMV E PY + K + + P
Sbjct: 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPP 365
Query: 231 AA--LSKVKDPEVKSFIEKCLV--PASQRLSAKELLMDPFLQVNG 271
L KV P +K F+++ LV PA QR +A ELL PFL G
Sbjct: 366 RLKNLHKV-SPSLKGFLDRLLVRDPA-QRATAAELLKHPFLAKAG 408
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 129/262 (49%), Gaps = 13/262 (4%)
Query: 29 DEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNI 88
D+V +E A +R V S +L EV +LK L H NI++ Y+ + D +N +
Sbjct: 58 DKVTHVERAIKIIRKTSVSTSSNS--KLLEEVAVLKLLDHPNIMKLYDFFEDKRN--YYL 113
Query: 89 ITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFING 148
+ E + G L +Q+LSG+ YLH H+ I+HRDLK +N+ +
Sbjct: 114 VMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN--IVHRDLKPENLLLES 171
Query: 149 NQGE--VKIGDLGLATIME-QANAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLEMV 205
+ + +KI D GL+ + E Q K +GT ++APE+ + Y+E D++S G+ + ++
Sbjct: 172 KEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILL 231
Query: 206 TFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPE--VKSFIEKCLVPASQ-RLSAKELL 262
YP + +I +KV G + K+ K I++ L SQ R+SA++ L
Sbjct: 232 A-GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQAL 290
Query: 263 MDPFLQVNGTTKNRPLPLPDIV 284
P+++ + K + LP +
Sbjct: 291 EHPWIKEMCSKKESGIELPSLA 312
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 18/213 (8%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
+P+ L+ +EV +L+ +H NI+ F Q + I+T+ SL +
Sbjct: 48 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ---LAIVTQWCEGSSLYHHLHASETK 104
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
ARQ G+ YLH+ IIHRDLK +NIF++ + VKIGD GLAT+ +
Sbjct: 105 FEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDN-TVKIGDFGLATVKSRW 161
Query: 168 NA----KSVIGTPEFMAPE---LYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQ 219
+ + + G+ +MAPE + D N Y+ +D+Y+FG+ + E++T + PYS N Q
Sbjct: 162 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 221
Query: 220 IYKKVSSGIKPAALSKVKD---PEVKSFIEKCL 249
I + V G LSKV+ +K + +CL
Sbjct: 222 IIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECL 254
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 20/226 (8%)
Query: 56 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXG 115
L SEV+LL+ LKH NI+R+Y+ ID N T+ I+ E G L
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 116 WARQILSGLIY----LHSHD---PPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--EQ 166
+ ++++ L H ++HRDLK N+F++G Q VK+GD GLA I+ ++
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN-VKLGDFGLARILNHDE 170
Query: 167 ANAKSVIGTPEFMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
AK +GTP +M+PE + +YNE +DI+S G + E+ P+ +A K+++
Sbjct: 171 DFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF-----TAFSQKELA 225
Query: 226 SGIKPAALSKV---KDPEVKSFIEKCL-VPASQRLSAKELLMDPFL 267
I+ ++ E+ I + L + R S +E+L +P +
Sbjct: 226 GKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 11/230 (4%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXX 113
E +Y+E+ LLKSL H NII+ ++ + D K ++TE + G L +
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFED--KKYFYLVTEFYEGGELFEQIINRHKFDECDA 148
Query: 114 XGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQG--EVKIGDLGLATIMEQ-ANAK 170
+QILSG+ YLH H+ I+HRD+K +NI + +KI D GL++ + +
Sbjct: 149 ANIMKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLR 206
Query: 171 SVIGTPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKP 230
+GT ++APE+ + YNE D++S G+ M ++ YP +N I KKV G
Sbjct: 207 DRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLC-GYPPFGGQNDQDIIKKVEKGKYY 265
Query: 231 AALSKVKD--PEVKSFIEKCLV-PASQRLSAKELLMDPFLQVNGTTKNRP 277
+ K+ E K I+ L ++R +A+E L +++ N+
Sbjct: 266 FDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKS 315
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 124/253 (49%), Gaps = 22/253 (8%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNK 84
Y A D G EVA +R ++ Q P+ E + +E+ +++ K+ NI+ + +S++
Sbjct: 38 YTAMDVATGQEVA---IRQMNLQQQPKK-ELIINEILVMRENKNPNIVNYLDSYL--VGD 91
Query: 85 TVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNI 144
+ ++ E GSL R+ L L +LHS+ +IHR++K DNI
Sbjct: 92 ELWVVMEYLAGGSLTDV-VTETCMDEGQIAAVCRECLQALEFLHSNQ--VIHRNIKSDNI 148
Query: 145 FINGNQGEVKIGDLGLATIM--EQANAKSVIGTPEFMAPELYDEN-YNELADIYSFGMCM 201
+ G G VK+ D G + EQ+ +++GTP +MAPE+ Y DI+S G+
Sbjct: 149 LL-GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA 207
Query: 202 LEMVTFEYPYSECRNSAQIYKKVSSGI----KPAALSKVKDPEVKSFIEKCL-VPASQRL 256
+EM+ E PY +Y ++G P LS + + F+ +CL + +R
Sbjct: 208 IEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI----FRDFLNRCLEMDVEKRG 263
Query: 257 SAKELLMDPFLQV 269
SAKEL+ FL++
Sbjct: 264 SAKELIQHQFLKI 276
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 113/224 (50%), Gaps = 11/224 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+D + EV LLK L H NI++ + I + + + I+ EL+T G L
Sbjct: 63 KDTSTILREVELLKKLDHPNIMKLFE--ILEDSSSFYIVGELYTGGELFDEIIKRKRFSE 120
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIMEQ-A 167
+Q+ SG+ Y+H H+ I+HRDLK +NI + + + +KI D GL+T +Q
Sbjct: 121 HDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178
Query: 168 NAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
K IGT ++APE+ Y+E D++S G+ + +++ P+ +N I K+V +G
Sbjct: 179 KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFY-GKNEYDILKRVETG 237
Query: 228 IKPAALSKVK--DPEVKSFIEKCLV-PASQRLSAKELLMDPFLQ 268
L + + + K I K L S R++A + L P++Q
Sbjct: 238 KYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 112/232 (48%), Gaps = 16/232 (6%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX 106
L+ + E L++EV +++ +H N++ YNS++ + ++ E G+L
Sbjct: 109 LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL--VGDELWVVMEFLEGGALTDI-VTHT 165
Query: 107 XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM-- 164
+L L LH+ +IHRD+K D+I + + G VK+ D G +
Sbjct: 166 RMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSK 222
Query: 165 EQANAKSVIGTPEFMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 223
E K ++GTP +MAPEL Y DI+S G+ ++EMV E PY + K
Sbjct: 223 EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKM 281
Query: 224 VSSGIKPAA--LSKVKDPEVKSFIEKCLV--PASQRLSAKELLMDPFLQVNG 271
+ + P L KV P +K F+++ LV PA QR +A ELL PFL G
Sbjct: 282 IRDNLPPRLKNLHKV-SPSLKGFLDRLLVRDPA-QRATAAELLKHPFLAKAG 331
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 112/232 (48%), Gaps = 16/232 (6%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX 106
L+ + E L++EV +++ +H N++ YNS++ + ++ E G+L
Sbjct: 66 LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL--VGDELWVVMEFLEGGALTDI-VTHT 122
Query: 107 XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM-- 164
+L L LH+ +IHRD+K D+I + + G VK+ D G +
Sbjct: 123 RMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSK 179
Query: 165 EQANAKSVIGTPEFMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 223
E K ++GTP +MAPEL Y DI+S G+ ++EMV E PY + K
Sbjct: 180 EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKM 238
Query: 224 VSSGIKPAA--LSKVKDPEVKSFIEKCLV--PASQRLSAKELLMDPFLQVNG 271
+ + P L KV P +K F+++ LV PA QR +A ELL PFL G
Sbjct: 239 IRDNLPPRLKNLHKV-SPSLKGFLDRLLVRDPA-QRATAAELLKHPFLAKAG 288
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 112/232 (48%), Gaps = 16/232 (6%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX 106
L+ + E L++EV +++ +H N++ YNS++ + ++ E G+L
Sbjct: 64 LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL--VGDELWVVMEFLEGGALTDI-VTHT 120
Query: 107 XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM-- 164
+L L LH+ +IHRD+K D+I + + G VK+ D G +
Sbjct: 121 RMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSK 177
Query: 165 EQANAKSVIGTPEFMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 223
E K ++GTP +MAPEL Y DI+S G+ ++EMV E PY + K
Sbjct: 178 EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKM 236
Query: 224 VSSGIKPAA--LSKVKDPEVKSFIEKCLV--PASQRLSAKELLMDPFLQVNG 271
+ + P L KV P +K F+++ LV PA QR +A ELL PFL G
Sbjct: 237 IRDNLPPRLKNLHKV-SPSLKGFLDRLLVRDPA-QRATAAELLKHPFLAKAG 286
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 113/224 (50%), Gaps = 11/224 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+D + EV LLK L H NI++ + I + + + I+ EL+T G L
Sbjct: 63 KDTSTILREVELLKKLDHPNIMKLFE--ILEDSSSFYIVGELYTGGELFDEIIKRKRFSE 120
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIMEQ-A 167
+Q+ SG+ Y+H H+ I+HRDLK +NI + + + +KI D GL+T +Q
Sbjct: 121 HDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178
Query: 168 NAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
K IGT ++APE+ Y+E D++S G+ + +++ P+ +N I K+V +G
Sbjct: 179 KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYG-KNEYDILKRVETG 237
Query: 228 IKPAALSKVK--DPEVKSFIEKCLV-PASQRLSAKELLMDPFLQ 268
L + + + K I K L S R++A + L P++Q
Sbjct: 238 KYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 112/232 (48%), Gaps = 16/232 (6%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX 106
L+ + E L++EV +++ +H N++ YNS++ + ++ E G+L
Sbjct: 55 LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL--VGDELWVVMEFLEGGALTDI-VTHT 111
Query: 107 XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM-- 164
+L L LH+ +IHRD+K D+I + + G VK+ D G +
Sbjct: 112 RMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSK 168
Query: 165 EQANAKSVIGTPEFMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 223
E K ++GTP +MAPEL Y DI+S G+ ++EMV E PY + K
Sbjct: 169 EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKM 227
Query: 224 VSSGIKPAA--LSKVKDPEVKSFIEKCLV--PASQRLSAKELLMDPFLQVNG 271
+ + P L KV P +K F+++ LV PA QR +A ELL PFL G
Sbjct: 228 IRDNLPPRLKNLHKV-SPSLKGFLDRLLVRDPA-QRATAAELLKHPFLAKAG 277
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 113/224 (50%), Gaps = 11/224 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+D + EV LLK L H NI++ + I + + + I+ EL+T G L
Sbjct: 63 KDTSTILREVELLKKLDHPNIMKLFE--ILEDSSSFYIVGELYTGGELFDEIIKRKRFSE 120
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIMEQ-A 167
+Q+ SG+ Y+H H+ I+HRDLK +NI + + + +KI D GL+T +Q
Sbjct: 121 HDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178
Query: 168 NAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
K IGT ++APE+ Y+E D++S G+ + +++ P+ +N I K+V +G
Sbjct: 179 KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYG-KNEYDILKRVETG 237
Query: 228 IKPAALSKVK--DPEVKSFIEKCLV-PASQRLSAKELLMDPFLQ 268
L + + + K I K L S R++A + L P++Q
Sbjct: 238 KYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 112/232 (48%), Gaps = 16/232 (6%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX 106
L+ + E L++EV +++ +H N++ YNS++ + ++ E G+L
Sbjct: 59 LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL--VGDELWVVMEFLEGGALTDI-VTHT 115
Query: 107 XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM-- 164
+L L LH+ +IHRD+K D+I + + G VK+ D G +
Sbjct: 116 RMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSK 172
Query: 165 EQANAKSVIGTPEFMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 223
E K ++GTP +MAPEL Y DI+S G+ ++EMV E PY + K
Sbjct: 173 EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKM 231
Query: 224 VSSGIKPAA--LSKVKDPEVKSFIEKCLV--PASQRLSAKELLMDPFLQVNG 271
+ + P L KV P +K F+++ LV PA QR +A ELL PFL G
Sbjct: 232 IRDNLPPRLKNLHKV-SPSLKGFLDRLLVRDPA-QRATAAELLKHPFLAKAG 281
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 111/238 (46%), Gaps = 44/238 (18%)
Query: 24 GYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWI 79
G AF +V N L+ + ++ + + E L + SEV LL SL H ++R+Y +W+
Sbjct: 15 GQGAFGQVVKARNALDSRYYAIK--KIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 80 DDQN-----------KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA--RQILSGLIY 126
+ +N T+ I E +G+L W RQIL L Y
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDL-IHSENLNQQRDEYWRLFRQILEALSY 131
Query: 127 LHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA----------------NAK 170
+HS IIHRDLK NIFI+ ++ VKIGD GLA + ++ N
Sbjct: 132 IHSQG--IIHRDLKPMNIFIDESRN-VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 171 SVIGTPEFMAPELYD--ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS 226
S IGT ++A E+ D +YNE D+YS G+ EM+ YP+S I KK+ S
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKKLRS 243
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 18/213 (8%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
+P+ L+ +EV +L+ +H NI+ F Q + I+T+ SL +
Sbjct: 72 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK 128
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
ARQ G+ YLH+ IIHRDLK +NIF++ + VKIGD GLAT+ +
Sbjct: 129 FEMIKLIDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRW 185
Query: 168 NA----KSVIGTPEFMAPE---LYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQ 219
+ + + G+ +MAPE + D+N Y+ +D+Y+FG+ + E++T + PYS N Q
Sbjct: 186 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245
Query: 220 IYKKVSSGIKPAALSKVKD---PEVKSFIEKCL 249
I V G LSKV+ +K + +CL
Sbjct: 246 IIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 278
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 18/213 (8%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
+P+ L+ +EV +L+ +H NI+ F Q + I+T+ SL +
Sbjct: 71 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK 127
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
ARQ G+ YLH+ IIHRDLK +NIF++ + VKIGD GLAT+ +
Sbjct: 128 FEMIKLIDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRW 184
Query: 168 NA----KSVIGTPEFMAPE---LYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQ 219
+ + + G+ +MAPE + D+N Y+ +D+Y+FG+ + E++T + PYS N Q
Sbjct: 185 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 244
Query: 220 IYKKVSSGIKPAALSKVKD---PEVKSFIEKCL 249
I V G LSKV+ +K + +CL
Sbjct: 245 IIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 277
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 18/250 (7%)
Query: 29 DEVNGLEVAWCQVRIDDVLQSPE--DLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTV 86
D++ G E C V++ Q + D E L EV LLK L H NI++ Y + D
Sbjct: 70 DKITGQE---CAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED--KGYF 124
Query: 87 NIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI 146
++ E++T G L RQ+LSG+ Y+H + I+HRDLK +N+ +
Sbjct: 125 YLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN--KIVHRDLKPENLLL 182
Query: 147 NGNQ--GEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYDENYNELADIYSFGMCMLE 203
++I D GL+T E + K IGT ++APE+ Y+E D++S G+ +
Sbjct: 183 ESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYI 242
Query: 204 MVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVK--DPEVKSFIEKCL--VPASQRLSAK 259
+++ P++ N I KKV G L + K K I K L VP S R+SA+
Sbjct: 243 LLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVP-SMRISAR 300
Query: 260 ELLMDPFLQV 269
+ L ++Q
Sbjct: 301 DALDHEWIQT 310
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 18/250 (7%)
Query: 29 DEVNGLEVAWCQVRIDDVLQSPE--DLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTV 86
D++ G E C V++ Q + D E L EV LLK L H NI++ Y + D
Sbjct: 71 DKITGQE---CAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED--KGYF 125
Query: 87 NIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI 146
++ E++T G L RQ+LSG+ Y+H + I+HRDLK +N+ +
Sbjct: 126 YLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN--KIVHRDLKPENLLL 183
Query: 147 NGNQ--GEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYDENYNELADIYSFGMCMLE 203
++I D GL+T E + K IGT ++APE+ Y+E D++S G+ +
Sbjct: 184 ESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYI 243
Query: 204 MVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVK--DPEVKSFIEKCL--VPASQRLSAK 259
+++ P++ N I KKV G L + K K I K L VP S R+SA+
Sbjct: 244 LLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVP-SMRISAR 301
Query: 260 ELLMDPFLQV 269
+ L ++Q
Sbjct: 302 DALDHEWIQT 311
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 18/213 (8%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
+P+ L+ +EV +L+ +H NI+ F Q + I+T+ SL +
Sbjct: 49 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK 105
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
ARQ G+ YLH+ IIHRDLK +NIF++ + VKIGD GLAT+ +
Sbjct: 106 FEMIKLIDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRW 162
Query: 168 NA----KSVIGTPEFMAPE---LYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQ 219
+ + + G+ +MAPE + D+N Y+ +D+Y+FG+ + E++T + PYS N Q
Sbjct: 163 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 222
Query: 220 IYKKVSSGIKPAALSKVKD---PEVKSFIEKCL 249
I V G LSKV+ +K + +CL
Sbjct: 223 IIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 255
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 18/213 (8%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
+P+ L+ +EV +L+ +H NI+ F Q + I+T+ SL +
Sbjct: 49 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK 105
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
ARQ G+ YLH+ IIHRDLK +NIF++ + VKIGD GLAT+ +
Sbjct: 106 FEMIKLIDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRW 162
Query: 168 NA----KSVIGTPEFMAPE---LYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQ 219
+ + + G+ +MAPE + D+N Y+ +D+Y+FG+ + E++T + PYS N Q
Sbjct: 163 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 222
Query: 220 IYKKVSSGIKPAALSKVKD---PEVKSFIEKCL 249
I V G LSKV+ +K + +CL
Sbjct: 223 IIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 255
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 108/213 (50%), Gaps = 18/213 (8%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
+P+ L+ +EV +L+ +H NI+ F Q + I+T+ SL +
Sbjct: 60 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ---LAIVTQWCEGSSLYHHLHASETK 116
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
ARQ G+ YLH+ IIHRDLK +NIF++ + VKIGD GLAT +
Sbjct: 117 FEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDN-TVKIGDFGLATEKSRW 173
Query: 168 NA----KSVIGTPEFMAPE---LYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQ 219
+ + + G+ +MAPE + D N Y+ +D+Y+FG+ + E++T + PYS N Q
Sbjct: 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233
Query: 220 IYKKVSSGIKPAALSKVKD---PEVKSFIEKCL 249
I + V G LSKV+ +K + +CL
Sbjct: 234 IIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECL 266
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 18/213 (8%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
+P+ L+ +EV +L+ +H NI+ F Q + I+T+ SL +
Sbjct: 46 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK 102
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
ARQ G+ YLH+ IIHRDLK +NIF++ + VKIGD GLAT+ +
Sbjct: 103 FEMIKLIDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRW 159
Query: 168 NA----KSVIGTPEFMAPE---LYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQ 219
+ + + G+ +MAPE + D+N Y+ +D+Y+FG+ + E++T + PYS N Q
Sbjct: 160 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 219
Query: 220 IYKKVSSGIKPAALSKVKD---PEVKSFIEKCL 249
I V G LSKV+ +K + +CL
Sbjct: 220 IIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 252
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 120/249 (48%), Gaps = 18/249 (7%)
Query: 29 DEVNGLEVAWCQVRIDDVLQSPE--DLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTV 86
D++ G E C V++ Q + D E L EV LLK L H NI++ Y + D
Sbjct: 47 DKITGQE---CAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED--KGYF 101
Query: 87 NIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI 146
++ E++T G L RQ+LSG+ Y+H + I+HRDLK +N+ +
Sbjct: 102 YLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN--KIVHRDLKPENLLL 159
Query: 147 NGNQ--GEVKIGDLGLATIMEQAN-AKSVIGTPEFMAPELYDENYNELADIYSFGMCMLE 203
++I D GL+T E + K IGT ++APE+ Y+E D++S G+ +
Sbjct: 160 ESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYI 219
Query: 204 MVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVK--DPEVKSFIEKCL--VPASQRLSAK 259
+++ P++ N I KKV G L + K K I K L VP S R+SA+
Sbjct: 220 LLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVP-SMRISAR 277
Query: 260 ELLMDPFLQ 268
+ L ++Q
Sbjct: 278 DALDHEWIQ 286
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 113/241 (46%), Gaps = 25/241 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL-RQYRXXXXX 107
+PE + +EV +L+ +H NI+ F D + I+T+ SL +
Sbjct: 72 TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD---NLAIVTQWCEGSSLYKHLHVQETK 128
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
ARQ G+ YLH+ + IIHRD+K +NIF++ VKIGD GLAT+ +
Sbjct: 129 FQMFQLIDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEGL-TVKIGDFGLATVKSRW 185
Query: 168 NAKSVIGTPE----FMAPE---LYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQ 219
+ + P +MAPE + D N ++ +D+YS+G+ + E++T E PYS N Q
Sbjct: 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ 245
Query: 220 IYKKVSSGIKPAALSKVKD---PEVKSFIEKCLVPAS-------QRLSAKELLMDPFLQV 269
I V G LSK+ +K + C+ Q LS+ ELL ++
Sbjct: 246 IIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKI 305
Query: 270 N 270
N
Sbjct: 306 N 306
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 18/213 (8%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
+P+ L+ +EV +L+ +H NI+ F Q + I+T+ SL +
Sbjct: 44 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK 100
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
ARQ G+ YLH+ IIHRDLK +NIF++ + VKIGD GLAT+ +
Sbjct: 101 FEMIKLIDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRW 157
Query: 168 NA----KSVIGTPEFMAPE---LYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQ 219
+ + + G+ +MAPE + D+N Y+ +D+Y+FG+ + E++T + PYS N Q
Sbjct: 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
Query: 220 IYKKVSSGIKPAALSKVKD---PEVKSFIEKCL 249
I V G LSKV+ +K + +CL
Sbjct: 218 IIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 250
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 125/256 (48%), Gaps = 14/256 (5%)
Query: 35 EVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFT 94
EV ++ +L P E++ E+ + +SL H +++ F+ + D N V ++ EL
Sbjct: 43 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED--NDFVFVVLELCR 100
Query: 95 SGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVK 154
SL + + RQI+ G YLH + +IHRDLK N+F+N + EVK
Sbjct: 101 RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDL-EVK 157
Query: 155 IGDLGLATIMEQ--ANAKSVIGTPEFMAPELYDENYNEL-ADIYSFGMCMLEMVTFEYPY 211
IGD GLAT +E K++ GTP ++APE+ + + D++S G M ++ + P+
Sbjct: 158 IGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
Query: 212 SECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVN 270
E + Y ++ ++ K +P S I+K L + R + ELL D F +
Sbjct: 218 -ETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF-TS 273
Query: 271 GTTKNRPLPLPDIVLP 286
G R LP+ + +P
Sbjct: 274 GYIPAR-LPITCLTIP 288
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 108/213 (50%), Gaps = 18/213 (8%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
+P+ L+ +EV +L+ +H NI+ F Q + I+T+ SL +
Sbjct: 60 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQ---LAIVTQWCEGSSLYHHLHASETK 116
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
ARQ G+ YLH+ IIHRDLK +NIF++ + VKIGD GLAT +
Sbjct: 117 FEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDN-TVKIGDFGLATEKSRW 173
Query: 168 NA----KSVIGTPEFMAPE---LYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQ 219
+ + + G+ +MAPE + D N Y+ +D+Y+FG+ + E++T + PYS N Q
Sbjct: 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233
Query: 220 IYKKVSSGIKPAALSKVKD---PEVKSFIEKCL 249
I + V G LSKV+ +K + +CL
Sbjct: 234 IIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECL 266
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 18/213 (8%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
+P+ L+ +EV +L+ +H NI+ F Q + I+T+ SL +
Sbjct: 44 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQ---LAIVTQWCEGSSLYHHLHIIETK 100
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
ARQ G+ YLH+ IIHRDLK +NIF++ + VKIGD GLAT+ +
Sbjct: 101 FEMIKLIDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRW 157
Query: 168 NA----KSVIGTPEFMAPE---LYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQ 219
+ + + G+ +MAPE + D+N Y+ +D+Y+FG+ + E++T + PYS N Q
Sbjct: 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
Query: 220 IYKKVSSGIKPAALSKVKD---PEVKSFIEKCL 249
I V G LSKV+ +K + +CL
Sbjct: 218 IIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 250
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 125/256 (48%), Gaps = 14/256 (5%)
Query: 35 EVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFT 94
EV ++ +L P E++ E+ + +SL H +++ F+ + D N V ++ EL
Sbjct: 47 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED--NDFVFVVLELCR 104
Query: 95 SGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVK 154
SL + + RQI+ G YLH + +IHRDLK N+F+N + EVK
Sbjct: 105 RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDL-EVK 161
Query: 155 IGDLGLATIMEQ--ANAKSVIGTPEFMAPELYDENYNEL-ADIYSFGMCMLEMVTFEYPY 211
IGD GLAT +E K++ GTP ++APE+ + + D++S G M ++ + P+
Sbjct: 162 IGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 221
Query: 212 SECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVN 270
E + Y ++ ++ K +P S I+K L + R + ELL D F +
Sbjct: 222 -ETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF-TS 277
Query: 271 GTTKNRPLPLPDIVLP 286
G R LP+ + +P
Sbjct: 278 GYIPAR-LPITCLTIP 292
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 114/247 (46%), Gaps = 62/247 (25%)
Query: 24 GYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWI 79
G AF +V N L+ + ++ + + E L + SEV LL SL H ++R+Y +W+
Sbjct: 15 GQGAFGQVVKARNALDSRYYAIK--KIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 80 DDQN-----------KTVNI---------ITELFTSGSLRQYRXXXXXXXXXXXXGWA-- 117
+ +N T+ I + +L S +L Q R W
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY----------WRLF 122
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA---------- 167
RQIL L Y+HS IIHRDLK NIFI+ ++ VKIGD GLA + ++
Sbjct: 123 RQILEALSYIHSQG--IIHRDLKPMNIFIDESRN-VKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 168 ------NAKSVIGTPEFMAPELYD--ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQ 219
N S IGT ++A E+ D +YNE D+YS G+ EM+ YP+S
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVN 236
Query: 220 IYKKVSS 226
I KK+ S
Sbjct: 237 ILKKLRS 243
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 133/279 (47%), Gaps = 16/279 (5%)
Query: 35 EVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFT 94
EV ++ +L P E++ E+ + +SL H +++ F+ + D N V ++ EL
Sbjct: 43 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED--NDFVFVVLELCR 100
Query: 95 SGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVK 154
SL + + RQI+ G YLH + +IHRDLK N+F+N + EVK
Sbjct: 101 RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDL-EVK 157
Query: 155 IGDLGLATIMEQ--ANAKSVIGTPEFMAPELYDENYNEL-ADIYSFGMCMLEMVTFEYPY 211
IGD GLAT +E K++ GTP ++APE+ + + D++S G M ++ + P+
Sbjct: 158 IGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
Query: 212 SECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVN 270
E + Y ++ ++ K +P S I+K L + R + ELL D F +
Sbjct: 218 -ETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF-TS 273
Query: 271 GTTKNRPLPLPDIVLPRVGAFGDRCL--MSEGPASVRNK 307
G R LP+ + +P + L + P +V NK
Sbjct: 274 GYIPAR-LPITCLTIPPXFSIAPSSLDPSNRKPLTVLNK 311
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 123/254 (48%), Gaps = 28/254 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR----QYR 102
L+ + E L++EV +++ +H N++ Y S++ + + ++ E G+L Q R
Sbjct: 80 LRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEE--LWVLMEFLQGGALTDIVSQVR 137
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
+L L YLH+ +IHRD+K D+I + + G VK+ D G
Sbjct: 138 LNEEQIATV-----CEAVLQALAYLHAQG--VIHRDIKSDSILLTLD-GRVKLSDFGFCA 189
Query: 163 IMEQ--ANAKSVIGTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQ 219
+ + K ++GTP +MAPE+ + Y DI+S G+ ++EMV E PY + Q
Sbjct: 190 QISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFS-DSPVQ 248
Query: 220 IYKKVSSGIKPAALSKVK-DPEVKSFIEKCLVPASQ-RLSAKELLMDPFLQVNGTTKNRP 277
K++ P + K P ++ F+E+ LV Q R +A+ELL PFL G
Sbjct: 249 AMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTG------ 302
Query: 278 LPLPDIVLPRVGAF 291
LP+ ++P + +
Sbjct: 303 --LPECLVPLIQLY 314
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 14/256 (5%)
Query: 35 EVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFT 94
EV ++ +L P E++ E+ + +SL H +++ F+ + D N V ++ EL
Sbjct: 67 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED--NDFVFVVLELCR 124
Query: 95 SGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVK 154
SL + + RQI+ G YLH + +IHRDLK N+F+N + EVK
Sbjct: 125 RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDL-EVK 181
Query: 155 IGDLGLATIMEQ--ANAKSVIGTPEFMAPELYDENYNEL-ADIYSFGMCMLEMVTFEYPY 211
IGD GLAT +E K + GTP ++APE+ + + D++S G M ++ + P+
Sbjct: 182 IGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 241
Query: 212 SECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVN 270
E + Y ++ ++ K +P S I+K L + R + ELL D F +
Sbjct: 242 -ETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF-TS 297
Query: 271 GTTKNRPLPLPDIVLP 286
G R LP+ + +P
Sbjct: 298 GYIPAR-LPITCLTIP 312
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 14/256 (5%)
Query: 35 EVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFT 94
EV ++ +L P E++ E+ + +SL H +++ F+ + D N V ++ EL
Sbjct: 65 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED--NDFVFVVLELCR 122
Query: 95 SGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVK 154
SL + + RQI+ G YLH + +IHRDLK N+F+N + EVK
Sbjct: 123 RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDL-EVK 179
Query: 155 IGDLGLATIMEQ--ANAKSVIGTPEFMAPELYDENYNEL-ADIYSFGMCMLEMVTFEYPY 211
IGD GLAT +E K + GTP ++APE+ + + D++S G M ++ + P+
Sbjct: 180 IGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 239
Query: 212 SECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVN 270
E + Y ++ ++ K +P S I+K L + R + ELL D F +
Sbjct: 240 -ETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF-TS 295
Query: 271 GTTKNRPLPLPDIVLP 286
G R LP+ + +P
Sbjct: 296 GYIPAR-LPITCLTIP 310
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 120/249 (48%), Gaps = 18/249 (7%)
Query: 29 DEVNGLEVAWCQVRIDDVLQSPE--DLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTV 86
D++ G E C V++ Q + D E L EV LLK L H NI++ Y + D
Sbjct: 53 DKITGQE---CAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED--KGYF 107
Query: 87 NIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI 146
++ E++T G L RQ+LSG+ Y+H + I+HRDLK +N+ +
Sbjct: 108 YLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN--KIVHRDLKPENLLL 165
Query: 147 NGNQ--GEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYDENYNELADIYSFGMCMLE 203
++I D GL+T E + K IGT ++APE+ Y+E D++S G+ +
Sbjct: 166 ESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYI 225
Query: 204 MVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVK--DPEVKSFIEKCL--VPASQRLSAK 259
+++ P++ N I KKV G L + K K I K L VP S R+SA+
Sbjct: 226 LLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVP-SMRISAR 283
Query: 260 ELLMDPFLQ 268
+ L ++Q
Sbjct: 284 DALDHEWIQ 292
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 108/213 (50%), Gaps = 18/213 (8%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
+P+ L+ +EV +L+ +H NI+ F Q + I+T+ SL +
Sbjct: 72 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK 128
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
ARQ G+ YLH+ IIHRDLK +NIF++ + VKIGD GLAT +
Sbjct: 129 FEMIKLIDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRW 185
Query: 168 NA----KSVIGTPEFMAPE---LYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQ 219
+ + + G+ +MAPE + D+N Y+ +D+Y+FG+ + E++T + PYS N Q
Sbjct: 186 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245
Query: 220 IYKKVSSGIKPAALSKVKD---PEVKSFIEKCL 249
I V G LSKV+ +K + +CL
Sbjct: 246 IIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 278
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 14/256 (5%)
Query: 35 EVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFT 94
EV ++ +L P E++ E+ + +SL H +++ F+ + D N V ++ EL
Sbjct: 41 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED--NDFVFVVLELCR 98
Query: 95 SGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVK 154
SL + + RQI+ G YLH + +IHRDLK N+F+N + EVK
Sbjct: 99 RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDL-EVK 155
Query: 155 IGDLGLATIMEQ--ANAKSVIGTPEFMAPELYDENYNEL-ADIYSFGMCMLEMVTFEYPY 211
IGD GLAT +E K + GTP ++APE+ + + D++S G M ++ + P+
Sbjct: 156 IGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 215
Query: 212 SECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVN 270
E + Y ++ ++ K +P S I+K L + R + ELL D F +
Sbjct: 216 -ETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF-TS 271
Query: 271 GTTKNRPLPLPDIVLP 286
G R LP+ + +P
Sbjct: 272 GYIPAR-LPITCLTIP 286
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 108/213 (50%), Gaps = 18/213 (8%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
+P+ L+ +EV +L+ +H NI+ F Q + I+T+ SL +
Sbjct: 64 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK 120
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
ARQ G+ YLH+ IIHRDLK +NIF++ + VKIGD GLAT +
Sbjct: 121 FEMIKLIDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRW 177
Query: 168 NA----KSVIGTPEFMAPE---LYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQ 219
+ + + G+ +MAPE + D+N Y+ +D+Y+FG+ + E++T + PYS N Q
Sbjct: 178 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 237
Query: 220 IYKKVSSGIKPAALSKVKD---PEVKSFIEKCL 249
I V G LSKV+ +K + +CL
Sbjct: 238 IIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 270
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 118/250 (47%), Gaps = 18/250 (7%)
Query: 29 DEVNGLEVAWCQVRIDDVLQSPE--DLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTV 86
D++ G E C V++ Q + D E L EV LLK L H NI + Y + D
Sbjct: 47 DKITGQE---CAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFED--KGYF 101
Query: 87 NIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI 146
++ E++T G L RQ+LSG+ Y H + I+HRDLK +N+ +
Sbjct: 102 YLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKN--KIVHRDLKPENLLL 159
Query: 147 --NGNQGEVKIGDLGLATIMEQAN-AKSVIGTPEFMAPELYDENYNELADIYSFGMCMLE 203
++I D GL+T E + K IGT ++APE+ Y+E D++S G+ +
Sbjct: 160 ESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYI 219
Query: 204 MVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVK--DPEVKSFIEKCL--VPASQRLSAK 259
+++ P++ N I KKV G L + K K I K L VP S R+SA+
Sbjct: 220 LLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVP-SXRISAR 277
Query: 260 ELLMDPFLQV 269
+ L ++Q
Sbjct: 278 DALDHEWIQT 287
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 108/213 (50%), Gaps = 18/213 (8%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
+P+ L+ +EV +L+ +H NI+ F Q + I+T+ SL +
Sbjct: 44 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK 100
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
ARQ G+ YLH+ IIHRDLK +NIF++ + VKIGD GLAT +
Sbjct: 101 FEMIKLIDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRW 157
Query: 168 NA----KSVIGTPEFMAPE---LYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQ 219
+ + + G+ +MAPE + D+N Y+ +D+Y+FG+ + E++T + PYS N Q
Sbjct: 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
Query: 220 IYKKVSSGIKPAALSKVKD---PEVKSFIEKCL 249
I V G LSKV+ +K + +CL
Sbjct: 218 IIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 250
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 13/219 (5%)
Query: 56 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXG 115
L EV +LK L H NI++ Y + D +N ++ E++ G L
Sbjct: 51 LLDEVAVLKQLDHPNIMKLYEFFEDKRN--YYLVMEVYRGGELFDEIILRQKFSEVDAAV 108
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIME-QANAKSV 172
+Q+LSG YLH H+ I+HRDLK +N+ + + +KI D GL+ E K
Sbjct: 109 IMKQVLSGTTYLHKHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER 166
Query: 173 IGTPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG---IK 229
+GT ++APE+ + Y+E D++S G+ +L ++ YP + +I K+V G
Sbjct: 167 LGTAYYIAPEVLRKKYDEKCDVWSCGV-ILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 225
Query: 230 PAALSKVKDPEVKSFIEKCLV-PASQRLSAKELLMDPFL 267
P ++V D E K ++ L S+R+SA+E L P++
Sbjct: 226 PPDWTQVSD-EAKQLVKLMLTYEPSKRISAEEALNHPWI 263
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 123/255 (48%), Gaps = 16/255 (6%)
Query: 35 EVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFT 94
EV +V +L P E++ +E+ + KSL + +++ F+ + DD V ++ E+
Sbjct: 68 EVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDD--FVYVVLEICR 125
Query: 95 SGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVK 154
SL + + RQ + G+ YLH++ +IHRDLK N+F+N + +VK
Sbjct: 126 RRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM-DVK 182
Query: 155 IGDLGLATIME--QANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPY 211
IGD GLAT +E K++ GTP ++APE L + ++ DI+S G + ++ + P+
Sbjct: 183 IGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Query: 212 -SECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMDPFLQVN 270
+ C I K + P ++ V ++ + + R S ELL D F
Sbjct: 243 ETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLH---ADPTLRPSVAELLTDEFF--- 296
Query: 271 GTTKNRPLPLPDIVL 285
T+ P+ LP L
Sbjct: 297 -TSGYAPMRLPTSCL 310
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 115/242 (47%), Gaps = 20/242 (8%)
Query: 48 QSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXX 107
+S E+LE E+ +L S H NI++ +++ + N + I+ E G++
Sbjct: 73 KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENN--LWILIEFCAGGAVDAVMLELER 130
Query: 108 -XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ 166
+Q L L YLH D IIHRDLK NI + G++K+ D G++ +
Sbjct: 131 PLTESQIQVVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTR 187
Query: 167 ANAK--SVIGTPEFMAPELY------DENYNELADIYSFGMCMLEMVTFEYPYSECRNSA 218
+ S IGTP +MAPE+ D Y+ AD++S G+ ++EM E P+ E N
Sbjct: 188 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPM 246
Query: 219 QIYKKVSSGIKPAALSKVK-DPEVKSFIEKCLVP-ASQRLSAKELLMDPFLQVNGTTKNR 276
++ K++ P + K F++KCL R + +LL PF+ V+ N+
Sbjct: 247 RVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDS---NK 303
Query: 277 PL 278
P+
Sbjct: 304 PI 305
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 114/231 (49%), Gaps = 14/231 (6%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX 106
L+ + E L++EV +++ H+N++ Y+S++ + ++ E G+L
Sbjct: 80 LRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL--VGDELWVVMEFLEGGALTDI-VTHT 136
Query: 107 XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM-- 164
+L L YLH+ +IHRD+K D+I + + G +K+ D G +
Sbjct: 137 RMNEEQIATVCLSVLRALSYLHNQG--VIHRDIKSDSILLTSD-GRIKLSDFGFCAQVSK 193
Query: 165 EQANAKSVIGTPEFMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 223
E K ++GTP +MAPE+ Y DI+S G+ ++EM+ E PY Q ++
Sbjct: 194 EVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFN-EPPLQAMRR 252
Query: 224 VSSGIKPAA--LSKVKDPEVKSFIEKCLV-PASQRLSAKELLMDPFLQVNG 271
+ + P L KV ++ F++ LV SQR +A+ELL PFL++ G
Sbjct: 253 IRDSLPPRVKDLHKVSS-VLRGFLDLMLVREPSQRATAQELLGHPFLKLAG 302
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 115/243 (47%), Gaps = 21/243 (8%)
Query: 48 QSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXX 107
+S E+LE E+ +L S H NI++ +++ + N + I+ E G++
Sbjct: 46 KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENN--LWILIEFCAGGAVDAVMLELER 103
Query: 108 -XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ 166
+Q L L YLH D IIHRDLK NI + G++K+ D G++ +
Sbjct: 104 PLTESQIQVVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTR 160
Query: 167 ANAK---SVIGTPEFMAPELY------DENYNELADIYSFGMCMLEMVTFEYPYSECRNS 217
+ S IGTP +MAPE+ D Y+ AD++S G+ ++EM E P+ E N
Sbjct: 161 TXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NP 219
Query: 218 AQIYKKVSSGIKPAALSKVK-DPEVKSFIEKCLVP-ASQRLSAKELLMDPFLQVNGTTKN 275
++ K++ P + K F++KCL R + +LL PF+ V+ N
Sbjct: 220 MRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDS---N 276
Query: 276 RPL 278
+P+
Sbjct: 277 KPI 279
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 115/242 (47%), Gaps = 20/242 (8%)
Query: 48 QSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXX 107
+S E+LE E+ +L S H NI++ +++ + N + I+ E G++
Sbjct: 73 KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENN--LWILIEFCAGGAVDAVMLELER 130
Query: 108 -XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ 166
+Q L L YLH D IIHRDLK NI + G++K+ D G++ +
Sbjct: 131 PLTESQIQVVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTR 187
Query: 167 ANAK--SVIGTPEFMAPELY------DENYNELADIYSFGMCMLEMVTFEYPYSECRNSA 218
+ S IGTP +MAPE+ D Y+ AD++S G+ ++EM E P+ E N
Sbjct: 188 XIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPM 246
Query: 219 QIYKKVSSGIKPAALSKVK-DPEVKSFIEKCLVP-ASQRLSAKELLMDPFLQVNGTTKNR 276
++ K++ P + K F++KCL R + +LL PF+ V+ N+
Sbjct: 247 RVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDS---NK 303
Query: 277 PL 278
P+
Sbjct: 304 PI 305
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 13/219 (5%)
Query: 56 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXG 115
L EV +LK L H NI++ Y + D +N ++ E++ G L
Sbjct: 68 LLDEVAVLKQLDHPNIMKLYEFFEDKRN--YYLVMEVYRGGELFDEIILRQKFSEVDAAV 125
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIME-QANAKSV 172
+Q+LSG YLH H+ I+HRDLK +N+ + + +KI D GL+ E K
Sbjct: 126 IMKQVLSGTTYLHKHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER 183
Query: 173 IGTPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG---IK 229
+GT ++APE+ + Y+E D++S G+ +L ++ YP + +I K+V G
Sbjct: 184 LGTAYYIAPEVLRKKYDEKCDVWSCGV-ILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 242
Query: 230 PAALSKVKDPEVKSFIEKCLV-PASQRLSAKELLMDPFL 267
P ++V D E K ++ L S+R+SA+E L P++
Sbjct: 243 PPDWTQVSD-EAKQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 16/255 (6%)
Query: 35 EVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFT 94
EV +V +L P E++ +E+ + KSL + +++ F+ + DD V ++ E+
Sbjct: 68 EVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDD--FVYVVLEICR 125
Query: 95 SGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVK 154
SL + + RQ + G+ YLH++ +IHRDLK N+F+N + +VK
Sbjct: 126 RRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM-DVK 182
Query: 155 IGDLGLATIME--QANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPY 211
IGD GLAT +E K + GTP ++APE L + ++ DI+S G + ++ + P+
Sbjct: 183 IGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Query: 212 -SECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMDPFLQVN 270
+ C I K + P ++ V ++ + + R S ELL D F
Sbjct: 243 ETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLH---ADPTLRPSVAELLTDEFF--- 296
Query: 271 GTTKNRPLPLPDIVL 285
T+ P+ LP L
Sbjct: 297 -TSGYAPMRLPTSCL 310
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 16/255 (6%)
Query: 35 EVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFT 94
EV +V +L P E++ +E+ + KSL + +++ F+ + DD V ++ E+
Sbjct: 68 EVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDD--FVYVVLEICR 125
Query: 95 SGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVK 154
SL + + RQ + G+ YLH++ +IHRDLK N+F+N + +VK
Sbjct: 126 RRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM-DVK 182
Query: 155 IGDLGLATIME--QANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPY 211
IGD GLAT +E K + GTP ++APE L + ++ DI+S G + ++ + P+
Sbjct: 183 IGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Query: 212 -SECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMDPFLQVN 270
+ C I K + P ++ V ++ + + R S ELL D F
Sbjct: 243 ETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLH---ADPTLRPSVAELLTDEFF--- 296
Query: 271 GTTKNRPLPLPDIVL 285
T+ P+ LP L
Sbjct: 297 -TSGYAPMRLPTSCL 310
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 16/255 (6%)
Query: 35 EVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFT 94
EV +V +L P E++ +E+ + KSL + +++ F+ + DD V ++ E+
Sbjct: 52 EVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDD--FVYVVLEICR 109
Query: 95 SGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVK 154
SL + + RQ + G+ YLH++ +IHRDLK N+F+N + +VK
Sbjct: 110 RRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR--VIHRDLKLGNLFLNDDM-DVK 166
Query: 155 IGDLGLATIME--QANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPY 211
IGD GLAT +E K + GTP ++APE L + ++ DI+S G + ++ + P+
Sbjct: 167 IGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226
Query: 212 -SECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMDPFLQVN 270
+ C I K + P ++ V ++ + + R S ELL D F
Sbjct: 227 ETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLH---ADPTLRPSVAELLTDEFF--- 280
Query: 271 GTTKNRPLPLPDIVL 285
T+ P+ LP L
Sbjct: 281 -TSGYAPMRLPTSCL 294
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 112/247 (45%), Gaps = 62/247 (25%)
Query: 24 GYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWI 79
G AF +V N L+ + ++ + + E L + SEV LL SL H ++R+Y +W+
Sbjct: 15 GQGAFGQVVKARNALDSRYYAIK--KIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 80 DDQN-----------KTVNI---------ITELFTSGSLRQYRXXXXXXXXXXXXGWA-- 117
+ +N T+ I + +L S +L Q R W
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY----------WRLF 122
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA---------- 167
RQIL L Y+HS IIHR+LK NIFI+ ++ VKIGD GLA + ++
Sbjct: 123 RQILEALSYIHSQG--IIHRNLKPXNIFIDESRN-VKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 168 ------NAKSVIGTPEFMAPELYD--ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQ 219
N S IGT ++A E+ D +YNE D YS G+ E + YP+S
Sbjct: 180 LPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTGXERVN 236
Query: 220 IYKKVSS 226
I KK+ S
Sbjct: 237 ILKKLRS 243
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 123/249 (49%), Gaps = 32/249 (12%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHN-NIIRFYNSWI-------DDQNKTVNIITEL 92
+++ DV E E + E+++LK H+ NI +Y ++I DDQ + ++ E
Sbjct: 54 IKVMDVTGDEE--EEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ---LWLVMEF 108
Query: 93 FTSGSLRQYRXXXXXXXXXXXXGW----ARQILSGLIYLHSHDPPIIHRDLKCDNIFING 148
+GS+ W R+IL GL +LH H +IHRD+K N+ +
Sbjct: 109 CGAGSVTDL--IKNTKGNTLKEEWIAYICREILRGLSHLHQHK--VIHRDIKGQNVLLTE 164
Query: 149 NQGEVKIGDLGLATIMEQANAK--SVIGTPEFMAPELY--DEN----YNELADIYSFGMC 200
N EVK+ D G++ +++ + + IGTP +MAPE+ DEN Y+ +D++S G+
Sbjct: 165 N-AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGIT 223
Query: 201 MLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAK 259
+EM P + ++ + P SK + +SFIE CLV SQR + +
Sbjct: 224 AIEMAEGAPPLCDMHPMRALF-LIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATE 282
Query: 260 ELLMDPFLQ 268
+L+ PF++
Sbjct: 283 QLMKHPFIR 291
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 132/262 (50%), Gaps = 24/262 (9%)
Query: 25 YKAFDEVNGLEVAWCQVRIDD--VLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQ 82
Y+A GLEVA +++ D + ++R+ +EV + LKH +I+ YN + +D
Sbjct: 28 YRAESIHTGLEVA---IKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN-YFEDS 83
Query: 83 NKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
N V ++ E+ +G + +Y + + QI++G++YLHSH I+HRDL
Sbjct: 84 N-YVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG--ILHRDLTL 140
Query: 142 DNIFINGNQGEVKIGDLGLATIMEQANAK--SVIGTPEFMAPELYDENYNEL-ADIYSFG 198
N+ + N +KI D GLAT ++ + K ++ GTP +++PE+ + + L +D++S G
Sbjct: 141 SNLLLTRNM-NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLG 199
Query: 199 MCMLEMVTFEYPYSECRNSAQIYKKV--SSGIKPAALSKVKDPEVKSFIEKCLV--PASQ 254
CM + P + KV + P+ LS E K I + L PA
Sbjct: 200 -CMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLS----IEAKDLIHQLLRRNPA-D 253
Query: 255 RLSAKELLMDPFLQVNGTTKNR 276
RLS +L PF+ N +TK++
Sbjct: 254 RLSLSSVLDHPFMSRNSSTKSK 275
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 28/246 (11%)
Query: 48 QSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXX 107
+S E+LE E+ +L S H NI++ +++ + N + I+ E G++
Sbjct: 73 KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENN--LWILIEFCAGGAVDAVMLELER 130
Query: 108 -XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ 166
+Q L L YLH D IIHRDLK NI + G++K+ D G++
Sbjct: 131 PLTESQIQVVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLD-GDIKLADFGVSA---- 183
Query: 167 ANAKSV------IGTPEFMAPELY------DENYNELADIYSFGMCMLEMVTFEYPYSEC 214
N + + IGTP +MAPE+ D Y+ AD++S G+ ++EM E P+ E
Sbjct: 184 KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
Query: 215 RNSAQIYKKVSSGIKPAALSKVK-DPEVKSFIEKCLVP-ASQRLSAKELLMDPFLQVNGT 272
N ++ K++ P + K F++KCL R + +LL PF+ V+
Sbjct: 244 -NPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDS- 301
Query: 273 TKNRPL 278
N+P+
Sbjct: 302 --NKPI 305
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 11/225 (4%)
Query: 50 PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX 109
P ++ E+ +L I+ FY ++ D ++I E GSL Q
Sbjct: 64 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIP 121
Query: 110 XXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA 169
+ ++ GL YL I+HRD+K NI +N ++GE+K+ D G++ + + A
Sbjct: 122 EQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA 179
Query: 170 KSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGI 228
S +GT +M+PE L +Y+ +DI+S G+ ++EM YP S I++ + +
Sbjct: 180 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIV 239
Query: 229 K---PAALSKVKDPEVKSFIEKCLV--PASQRLSAKELLMDPFLQ 268
P S V E + F+ KCL+ PA +R K+L++ F++
Sbjct: 240 NEPPPKLPSGVFSLEFQDFVNKCLIKNPA-ERADLKQLMVHAFIK 283
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 119/254 (46%), Gaps = 28/254 (11%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL--RQYRXXXX 106
S ++ E EV +L ++KH NI+++ S+ ++N ++ I+ + G L R
Sbjct: 63 SSKEREESRREVAVLANMKHPNIVQYRESF--EENGSLYIVMDYCEGGDLFKRINAQKGV 120
Query: 107 XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ 166
W QI L H HD I+HRD+K NIF+ + G V++GD G+A ++
Sbjct: 121 LFQEDQILDWFVQICLAL--KHVHDRKILHRDIKSQNIFLTKD-GTVQLGDFGIARVLNS 177
Query: 167 AN--AKSVIGTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 223
A++ IGTP +++PE+ + YN +DI++ G + E+ T ++ + + K
Sbjct: 178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI 237
Query: 224 VSSGIKPAALSKVKD----------------PEVKSFIEKCLVPAS-QRLSAKELLMDPF 266
+S P +L D P V S +EK + ++ + +L+ + F
Sbjct: 238 ISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEF 297
Query: 267 -LQVNGTTKNRPLP 279
L+ ++P+P
Sbjct: 298 CLKTFSKFGSQPIP 311
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 12/220 (5%)
Query: 48 QSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXX 107
QS E + + EV L+ L+H N I++ ++ + T ++ E +
Sbjct: 93 QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLVMEYCLGSASDLLEVHKKP 150
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
L GL YLHSH+ +IHRD+K NI ++ G VK+GD G A+IM A
Sbjct: 151 LQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLS-EPGLVKLGDFGSASIMAPA 207
Query: 168 NAKSVIGTPEFMAPEL---YDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 223
N +GTP +MAPE+ DE Y+ D++S G+ +E+ + P + +Y
Sbjct: 208 N--XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-H 264
Query: 224 VSSGIKPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLM 263
++ PA S ++F++ CL Q E+L+
Sbjct: 265 IAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLL 304
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 114/235 (48%), Gaps = 12/235 (5%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
++I D+ ++ +++E + E+ +L + ++Y S++ D + II E GS
Sbjct: 37 IKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTK--LWIIMEYLGGGSALD 94
Query: 101 YRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGL 160
R+IL GL YLHS IHRD+K N+ ++ GEVK+ D G+
Sbjct: 95 LLEPGPLDETQIAT-ILREILKGLDYLHSEKK--IHRDIKAANVLLS-EHGEVKLADFGV 150
Query: 161 ATIMEQANAK--SVIGTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNS 217
A + K + +GTP +MAPE+ ++ Y+ ADI+S G+ +E+ E P+SE
Sbjct: 151 AGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM 210
Query: 218 AQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNG 271
++ + P L +K F+E CL S R +AKELL F+ N
Sbjct: 211 KVLF--LIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNA 263
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 12/220 (5%)
Query: 48 QSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXX 107
QS E + + EV L+ L+H N I++ ++ + T ++ E +
Sbjct: 54 QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLVMEYCLGSASDLLEVHKKP 111
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
L GL YLHSH+ +IHRD+K NI ++ G VK+GD G A+IM A
Sbjct: 112 LQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLS-EPGLVKLGDFGSASIMAPA 168
Query: 168 NAKSVIGTPEFMAPEL---YDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 223
N +GTP +MAPE+ DE Y+ D++S G+ +E+ + P + +Y
Sbjct: 169 N--XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-H 225
Query: 224 VSSGIKPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLM 263
++ PA S ++F++ CL Q E+L+
Sbjct: 226 IAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLL 265
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 114/235 (48%), Gaps = 12/235 (5%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
++I D+ ++ +++E + E+ +L + ++Y S++ D + II E GS
Sbjct: 57 IKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTK--LWIIMEYLGGGSALD 114
Query: 101 YRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGL 160
R+IL GL YLHS IHRD+K N+ ++ GEVK+ D G+
Sbjct: 115 LLEPGPLDETQIAT-ILREILKGLDYLHSEKK--IHRDIKAANVLLS-EHGEVKLADFGV 170
Query: 161 ATIMEQANAK--SVIGTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNS 217
A + K + +GTP +MAPE+ ++ Y+ ADI+S G+ +E+ E P+SE
Sbjct: 171 AGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM 230
Query: 218 AQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNG 271
++ + P L +K F+E CL S R +AKELL F+ N
Sbjct: 231 KVLF--LIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNA 283
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 111/230 (48%), Gaps = 17/230 (7%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
R+ E+ LK L+H +II+ Y+ I V +I + G L Y
Sbjct: 55 RVEREISYLKLLRHPHIIKLYDV-ITTPTDIVMVIE--YAGGELFDYIVEKKRMTEDEGR 111
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN-AKSVI 173
+ +QI+ + Y H H I+HRDLK +N+ ++ N VKI D GL+ IM N K+
Sbjct: 112 RFFQQIICAIEYCHRHK--IVHRDLKPENLLLDDNLN-VKIADFGLSNIMTDGNFLKTSC 168
Query: 174 GTPEFMAPELYDENY--NELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG--IK 229
G+P + APE+ + D++S G+ + M+ P+ + ++KKV+S +
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD-EFIPNLFKKVNSCVYVM 227
Query: 230 PAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELLMDPFLQVNGTTKNRPL 278
P LS P +S I + +V QR++ +E+ DP+ VN RP+
Sbjct: 228 PDFLS----PGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPM 273
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 113/235 (48%), Gaps = 12/235 (5%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
++I D+ ++ +++E + E+ +L + ++Y S++ D + II E GS
Sbjct: 52 IKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTK--LWIIMEYLGGGSALD 109
Query: 101 YRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGL 160
R+IL GL YLHS IHRD+K N+ ++ GEVK+ D G+
Sbjct: 110 LLEPGPLDETQIAT-ILREILKGLDYLHSEKK--IHRDIKAANVLLS-EHGEVKLADFGV 165
Query: 161 ATIMEQANAK--SVIGTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNS 217
A + K +GTP +MAPE+ ++ Y+ ADI+S G+ +E+ E P+SE
Sbjct: 166 AGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM 225
Query: 218 AQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNG 271
++ + P L +K F+E CL S R +AKELL F+ N
Sbjct: 226 KVLF--LIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNA 278
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 108/223 (48%), Gaps = 13/223 (5%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX 106
++S + + E+ L + H NI++ Y + ++ V ++ E GSL
Sbjct: 40 IESESERKAFIVELRQLSRVNHPNIVKLYGACLNP----VCLVMEYAEGGSLYNVLHGAE 95
Query: 107 ---XXXXXXXXGWARQILSGLIYLHSHDP-PIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
W Q G+ YLHS P +IHRDLK N+ + +KI D G A
Sbjct: 96 PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC 155
Query: 163 IMEQANAKSVIGTPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSA-QI 220
+ Q + + G+ +MAPE+++ NY+E D++S+G+ + E++T P+ E A +I
Sbjct: 156 DI-QTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI 214
Query: 221 YKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELL 262
V +G +P + + P ++S + +C SQR S +E++
Sbjct: 215 MWAVHNGTRPPLIKNLPKP-IESLMTRCWSKDPSQRPSMEEIV 256
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 108/223 (48%), Gaps = 13/223 (5%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX 106
++S + + E+ L + H NI++ Y + ++ V ++ E GSL
Sbjct: 39 IESESERKAFIVELRQLSRVNHPNIVKLYGACLN----PVCLVMEYAEGGSLYNVLHGAE 94
Query: 107 ---XXXXXXXXGWARQILSGLIYLHSHDP-PIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
W Q G+ YLHS P +IHRDLK N+ + +KI D G A
Sbjct: 95 PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC 154
Query: 163 IMEQANAKSVIGTPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSA-QI 220
+ Q + + G+ +MAPE+++ NY+E D++S+G+ + E++T P+ E A +I
Sbjct: 155 DI-QTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI 213
Query: 221 YKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELL 262
V +G +P + + P ++S + +C SQR S +E++
Sbjct: 214 MWAVHNGTRPPLIKNLPKP-IESLMTRCWSKDPSQRPSMEEIV 255
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 113/235 (48%), Gaps = 12/235 (5%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
++I D+ ++ +++E + E+ +L + ++Y S++ D + II E GS
Sbjct: 37 IKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTK--LWIIMEYLGGGSALD 94
Query: 101 YRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGL 160
R+IL GL YLHS IHRD+K N+ ++ GEVK+ D G+
Sbjct: 95 LLEPGPLDETQIAT-ILREILKGLDYLHSEKK--IHRDIKAANVLLS-EHGEVKLADFGV 150
Query: 161 ATIMEQANAK--SVIGTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNS 217
A + K +GTP +MAPE+ ++ Y+ ADI+S G+ +E+ E P+SE
Sbjct: 151 AGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM 210
Query: 218 AQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNG 271
++ + P L +K F+E CL S R +AKELL F+ N
Sbjct: 211 KVLF--LIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNA 263
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 94/182 (51%), Gaps = 24/182 (13%)
Query: 43 IDDVLQSPEDLERLY-SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY 101
+ ++++ E+ +R + EV +++ L+H N+++F D K +N ITE G+LR
Sbjct: 40 MKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKD--KRLNFITEYIKGGTLRGI 97
Query: 102 -RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGL 160
+ +A+ I SG+ YLHS + IIHRDL N + N+ V + D GL
Sbjct: 98 IKSMDSQYPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVRENK-NVVVADFGL 154
Query: 161 ATIM----------------EQANAKSVIGTPEFMAPELYD-ENYNELADIYSFGMCMLE 203
A +M ++ +V+G P +MAPE+ + +Y+E D++SFG+ + E
Sbjct: 155 ARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCE 214
Query: 204 MV 205
++
Sbjct: 215 II 216
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 18/171 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXX 107
S ED+ER EV +LK ++H N+I + + +NKT V +I EL G L +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKES 110
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIM 164
+ +QIL+G+ YLHS I H DLK +NI + N + +KI D GLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 165 EQANA-KSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY 211
+ N K++ GTPEF+APE+ NY L AD++S G+ +++ P+
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 18/171 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXX 107
S ED+ER EV +LK ++H N+I + + +NKT V +I EL G L +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKES 110
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIM 164
+ +QIL+G+ YLHS I H DLK +NI + N + +KI D GLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 165 EQANA-KSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY 211
+ N K++ GTPEF+APE+ NY L AD++S G+ +++ P+
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 116/242 (47%), Gaps = 19/242 (7%)
Query: 48 QSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXX 107
+S E+LE E+ +L + H I++ ++ D + I+ E G++
Sbjct: 55 KSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGK--LWIMIEFCPGGAVDAIMLELDR 112
Query: 108 XXXXXXXGWA-RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ 166
RQ+L L +LHS IIHRDLK N+ + +G++++ D G++ +
Sbjct: 113 GLTEPQIQVVCRQMLEALNFLHSKR--IIHRDLKAGNVLMT-LEGDIRLADFGVSAKNLK 169
Query: 167 ANAK--SVIGTPEFMAPELY------DENYNELADIYSFGMCMLEMVTFEYPYSECRNSA 218
K S IGTP +MAPE+ D Y+ ADI+S G+ ++EM E P+ E N
Sbjct: 170 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL-NPM 228
Query: 219 QIYKKVSSGIKPAALSKVK-DPEVKSFIEKCLVPASQ-RLSAKELLMDPFLQVNGTTKNR 276
++ K++ P L+ K E + F++ L + R SA +LL PF V+ T N+
Sbjct: 229 RVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPF--VSSITSNK 286
Query: 277 PL 278
L
Sbjct: 287 AL 288
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 18/171 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXX 107
S ED+ER EV +LK ++H N+I + + +NKT V +I EL G L +
Sbjct: 56 SREDIER---EVSILKEIQHPNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKES 109
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIM 164
+ +QIL+G+ YLHS I H DLK +NI + N + +KI D GLA +
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167
Query: 165 EQANA-KSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY 211
+ N K++ GTPEF+APE+ NY L AD++S G+ +++ P+
Sbjct: 168 DFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 18/171 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXX 107
S ED+ER EV +LK ++H N+I + + +NKT V +I EL G L +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKES 110
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIM 164
+ +QIL+G+ YLHS I H DLK +NI + N + +KI D GLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 165 EQANA-KSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY 211
+ N K++ GTPEF+APE+ NY L AD++S G+ +++ P+
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 18/171 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXX 107
S ED+ER EV +LK ++H N+I + + +NKT V +I EL G L +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKES 110
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIM 164
+ +QIL+G+ YLHS I H DLK +NI + N + +KI D GLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 165 EQANA-KSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY 211
+ N K++ GTPEF+APE+ NY L AD++S G+ +++ P+
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 18/171 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXX 107
S ED+ER EV +LK ++H N+I + + +NKT V +I EL G L +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKES 110
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIM 164
+ +QIL+G+ YLHS I H DLK +NI + N + +KI D GLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 165 EQANA-KSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY 211
+ N K++ GTPEF+APE+ NY L AD++S G+ +++ P+
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 116/242 (47%), Gaps = 19/242 (7%)
Query: 48 QSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXX 107
+S E+LE E+ +L + H I++ ++ D + I+ E G++
Sbjct: 47 KSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGK--LWIMIEFCPGGAVDAIMLELDR 104
Query: 108 XXXXXXXGWA-RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ 166
RQ+L L +LHS IIHRDLK N+ + +G++++ D G++ +
Sbjct: 105 GLTEPQIQVVCRQMLEALNFLHSKR--IIHRDLKAGNVLMT-LEGDIRLADFGVSAKNLK 161
Query: 167 ANAK--SVIGTPEFMAPELY------DENYNELADIYSFGMCMLEMVTFEYPYSECRNSA 218
K S IGTP +MAPE+ D Y+ ADI+S G+ ++EM E P+ E N
Sbjct: 162 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL-NPM 220
Query: 219 QIYKKVSSGIKPAALSKVK-DPEVKSFIEKCLVPASQ-RLSAKELLMDPFLQVNGTTKNR 276
++ K++ P L+ K E + F++ L + R SA +LL PF V+ T N+
Sbjct: 221 RVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPF--VSSITSNK 278
Query: 277 PL 278
L
Sbjct: 279 AL 280
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 18/171 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXX 107
S ED+ER EV +LK ++H N+I + + +NKT V +I EL G L +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKES 110
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIM 164
+ +QIL+G+ YLHS I H DLK +NI + N + +KI D GLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 165 EQANA-KSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY 211
+ N K++ GTPEF+APE+ NY L AD++S G+ +++ P+
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 18/171 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXX 107
S ED+ER EV +LK ++H N+I + + +NKT V +I EL G L +
Sbjct: 56 SREDIER---EVSILKEIQHPNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKES 109
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIM 164
+ +QIL+G+ YLHS I H DLK +NI + N + +KI D GLA +
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167
Query: 165 EQANA-KSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY 211
+ N K++ GTPEF+APE+ NY L AD++S G+ +++ P+
Sbjct: 168 DFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 18/171 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXX 107
S ED+ER EV +LK ++H N+I + + +NKT V +I EL G L +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKES 110
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIM 164
+ +QIL+G+ YLHS I H DLK +NI + N + +KI D GLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 165 EQANA-KSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY 211
+ N K++ GTPEF+APE+ NY L AD++S G+ +++ P+
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 18/171 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXX 107
S ED+ER EV +LK ++H N+I + + +NKT V +I EL G L +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKES 110
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIM 164
+ +QIL+G+ YLHS I H DLK +NI + N + +KI D GLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 165 EQANA-KSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY 211
+ N K++ GTPEF+APE+ NY L AD++S G+ +++ P+
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 18/171 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXX 107
S ED+ER EV +LK ++H N+I + + +NKT V +I EL G L +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVY---ENKTDVILIGELVAGGELFDFLAEKES 110
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIM 164
+ +QIL+G+ YLHS I H DLK +NI + N + +KI D GLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 165 EQANA-KSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY 211
+ N K++ GTPEF+APE+ NY L AD++S G+ +++ P+
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 18/171 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXX 107
S ED+ER EV +LK ++H N+I + + +NKT V +I EL G L +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKES 110
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIM 164
+ +QIL+G+ YLHS I H DLK +NI + N + +KI D GLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 165 EQANA-KSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY 211
+ N K++ GTPEF+APE+ NY L AD++S G+ +++ P+
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 18/171 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXX 107
S ED+ER EV +LK ++H N+I + + +NKT V +I EL G L +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKES 110
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIM 164
+ +QIL+G+ YLHS I H DLK +NI + N + +KI D GLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 165 EQANA-KSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY 211
+ N K++ GTPEF+APE+ NY L AD++S G+ +++ P+
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 104/201 (51%), Gaps = 13/201 (6%)
Query: 31 VNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNII 89
+ G EVA V+I D Q +P L++L+ EV ++K L H NI++ + + + KT+ ++
Sbjct: 38 LTGREVA---VKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE--VIETEKTLYLV 92
Query: 90 TELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGN 149
E + G + Y RQI+S + Y H I+HRDLK +N+ ++G+
Sbjct: 93 MEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY--CHQKYIVHRDLKAENLLLDGD 150
Query: 150 QGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYD-ENYN-ELADIYSFGMCMLEMVT 206
+KI D G + N + G+P + APEL+ + Y+ D++S G+ + +V+
Sbjct: 151 MN-IKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 209
Query: 207 FEYPYSECRNSAQIYKKVSSG 227
P+ + +N ++ ++V G
Sbjct: 210 GSLPF-DGQNLKELRERVLRG 229
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 15/230 (6%)
Query: 50 PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX 109
P ++ E+ +L I+ FY ++ D ++I E GSL Q
Sbjct: 45 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIP 102
Query: 110 XXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA 169
+ ++ GL YL I+HRD+K NI +N ++GE+K+ D G++ + + A
Sbjct: 103 EQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA 160
Query: 170 KSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPY------SECRNSAQIYK 222
S +GT +M+PE L +Y+ +DI+S G+ ++EM YP + R I++
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFE 220
Query: 223 KVSSGIK---PAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELLMDPFLQ 268
+ + P S V E + F+ KCL+ ++R K+L++ F++
Sbjct: 221 LLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 270
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 10/192 (5%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNK 84
Y A D + ++VA + I + E L+R EVH L H NI+ + +D+++
Sbjct: 28 YLAEDTILNIKVAIKAIFIPP-REKEETLKRFEREVHNSSQLSHQNIVSMID--VDEEDD 84
Query: 85 TVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNI 144
++ E +L +Y + QIL G+ H+HD I+HRD+K NI
Sbjct: 85 CYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGI--KHAHDMRIVHRDIKPQNI 142
Query: 145 FINGNQGEVKIGDLGLATIMEQAN---AKSVIGTPEFMAPE-LYDENYNELADIYSFGMC 200
I+ N+ +KI D G+A + + + V+GT ++ +PE E +E DIYS G+
Sbjct: 143 LIDSNK-TLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIV 201
Query: 201 MLEMVTFEYPYS 212
+ EM+ E P++
Sbjct: 202 LYEMLVGEPPFN 213
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 14/226 (6%)
Query: 47 LQSPEDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXX 105
+ P+D R +EV + + +H +R +W ++ + + TEL +
Sbjct: 94 FRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAW--EEGGILYLQTELCGPSLQQHCEAWG 151
Query: 106 XXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME 165
G+ R L L +LHS ++H D+K NIF+ G +G K+GD GL +
Sbjct: 152 ASLPEAQVWGYLRDTLLALAHLHSQG--LVHLDVKPANIFL-GPRGRCKLGDFGLLVELG 208
Query: 166 QANAKSVI-GTPEFMAPELYDENYNELADIYSFGMCMLEMVT-FEYPYSECRNSAQIYKK 223
A A V G P +MAPEL +Y AD++S G+ +LE+ E P+ + +++
Sbjct: 209 TAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPH-----GGEGWQQ 263
Query: 224 VSSGIKPAALSKVKDPEVKSFIEKCLVPASQ-RLSAKELLMDPFLQ 268
+ G P + E++S + L P + R +A+ LL P L+
Sbjct: 264 LRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLR 309
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 132/266 (49%), Gaps = 21/266 (7%)
Query: 31 VNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNII 89
+ G EVA VRI D Q + L++L+ EV ++K L H NI++ + + + KT+ ++
Sbjct: 37 LTGKEVA---VRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLV 91
Query: 90 TELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGN 149
E + G + Y RQI+S + Y H I+HRDLK +N+ ++ +
Sbjct: 92 MEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY--CHQKFIVHRDLKAENLLLDAD 149
Query: 150 QGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYD-ENYN-ELADIYSFGMCMLEMVT 206
+KI D G + N + G+P + APEL+ + Y+ D++S G+ + +V+
Sbjct: 150 MN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 207 FEYPYSECRNSAQIYKKVSSGIK--PAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMD 264
P+ + +N ++ ++V G P +S + +K F+ ++ S+R + ++++ D
Sbjct: 209 GSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMKD 264
Query: 265 PFLQV---NGTTKNRPLPLPDIVLPR 287
++ V + K PLPD PR
Sbjct: 265 RWMNVGHEDDELKPYVEPLPDYKDPR 290
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 13/224 (5%)
Query: 50 PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX 109
P ++ E+ +L I+ FY ++ D ++I E GSL Q
Sbjct: 48 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIP 105
Query: 110 XXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA 169
+ ++ GL YL I+HRD+K NI +N ++GE+K+ D G++ + A
Sbjct: 106 EQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDEMA 163
Query: 170 KSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGI 228
+GT +M+PE L +Y+ +DI+S G+ ++EM YP R I++ + +
Sbjct: 164 NEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP----RPPMAIFELLDYIV 219
Query: 229 K---PAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELLMDPFLQ 268
P S V E + F+ KCL+ ++R K+L++ F++
Sbjct: 220 NEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 263
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 91/171 (53%), Gaps = 18/171 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXX 107
S ED+ER EV +LK ++H N+I + + +NKT V +I EL G L +
Sbjct: 57 SREDIER---EVSILKEIQHPNVITLHEVY---ENKTDVILILELVAGGELFDFLAEKES 110
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIM 164
+ +QIL+G+ YLHS I H DLK +NI + N + +KI D GLA +
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 165 EQANA-KSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY 211
+ N K++ GTP F+APE+ NY L AD++S G+ +++ P+
Sbjct: 169 DFGNEFKNIFGTPAFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 131/266 (49%), Gaps = 21/266 (7%)
Query: 31 VNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNII 89
+ G EVA VRI D Q + L++L+ EV ++K L H NI++ + + + KT+ ++
Sbjct: 37 LTGKEVA---VRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLV 91
Query: 90 TELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGN 149
E + G + Y RQI+S + Y H I+HRDLK +N+ ++ +
Sbjct: 92 MEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY--CHQKFIVHRDLKAENLLLDAD 149
Query: 150 QGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYD-ENYN-ELADIYSFGMCMLEMVT 206
+KI D G + N G+P + APEL+ + Y+ D++S G+ + +V+
Sbjct: 150 MN-IKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 207 FEYPYSECRNSAQIYKKVSSGIK--PAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMD 264
P+ + +N ++ ++V G P +S + +K F+ ++ S+R + ++++ D
Sbjct: 209 GSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMKD 264
Query: 265 PFLQV---NGTTKNRPLPLPDIVLPR 287
++ V + K PLPD PR
Sbjct: 265 RWMNVGHEDDELKPYVEPLPDYKDPR 290
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 132/266 (49%), Gaps = 21/266 (7%)
Query: 31 VNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNII 89
+ G EVA V+I D Q + L++L+ EV ++K L H NI++ + + + KT+ ++
Sbjct: 37 LTGKEVA---VKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLV 91
Query: 90 TELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGN 149
E + G + Y RQI+S + Y H I+HRDLK +N+ ++ +
Sbjct: 92 MEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY--CHQKFIVHRDLKAENLLLDAD 149
Query: 150 QGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYD-ENYN-ELADIYSFGMCMLEMVT 206
+KI D G + N + G+P + APEL+ + Y+ D++S G+ + +V+
Sbjct: 150 M-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 207 FEYPYSECRNSAQIYKKVSSGIK--PAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMD 264
P+ + +N ++ ++V G P +S + +K F+ ++ S+R + ++++ D
Sbjct: 209 GSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMKD 264
Query: 265 PFLQV---NGTTKNRPLPLPDIVLPR 287
++ V + K PLPD PR
Sbjct: 265 RWMNVGHEDDELKPYVAPLPDYKDPR 290
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 93/171 (54%), Gaps = 18/171 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXX 107
S E++ER EV++L+ ++H NII ++ + +NKT V +I EL + G L +
Sbjct: 51 SREEIER---EVNILREIRHPNIITLHDIF---ENKTDVVLILELVSGGELFDFLAEKES 104
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIM 164
+ +QIL G+ YLHS I H DLK +NI + N +K+ D G+A +
Sbjct: 105 LTEDEATQFLKQILDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162
Query: 165 EQANA-KSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY 211
E N K++ GTPEF+APE+ NY L AD++S G+ +++ P+
Sbjct: 163 EAGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 93/171 (54%), Gaps = 18/171 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXX 107
S E++ER EV++L+ ++H NII ++ + +NKT V +I EL + G L +
Sbjct: 58 SREEIER---EVNILREIRHPNIITLHDIF---ENKTDVVLILELVSGGELFDFLAEKES 111
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIM 164
+ +QIL G+ YLHS I H DLK +NI + N +K+ D G+A +
Sbjct: 112 LTEDEATQFLKQILDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 169
Query: 165 EQANA-KSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY 211
E N K++ GTPEF+APE+ NY L AD++S G+ +++ P+
Sbjct: 170 EAGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 24/231 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXX 107
S E++ER EV +L+ + H+N+I ++ + +N+T V +I EL + G L +
Sbjct: 58 SREEIER---EVSILRQVLHHNVITLHDVY---ENRTDVVLILELVSGGELFDFLAQKES 111
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIM 164
+ +QIL G+ YLH+ I H DLK +NI + N +K+ D GLA +
Sbjct: 112 LSEEEATSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 165 EQA-NAKSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY---SECRNS 217
E K++ GTPEF+APE+ NY L AD++S G+ +++ P+ ++
Sbjct: 170 EDGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
Query: 218 AQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVPAS-QRLSAKELLMDPFL 267
A I VS S+ + K FI K LV + +RL+ +E L P++
Sbjct: 228 ANI-TAVSYDFDEEFFSQTSEL-AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 93/171 (54%), Gaps = 18/171 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXX 107
S E++ER EV++L+ ++H NII ++ + +NKT V +I EL + G L +
Sbjct: 72 SREEIER---EVNILREIRHPNIITLHDIF---ENKTDVVLILELVSGGELFDFLAEKES 125
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIM 164
+ +QIL G+ YLHS I H DLK +NI + N +K+ D G+A +
Sbjct: 126 LTEDEATQFLKQILDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 183
Query: 165 EQANA-KSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY 211
E N K++ GTPEF+APE+ NY L AD++S G+ +++ P+
Sbjct: 184 EAGNEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 24/231 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXX 107
S E++ER EV +L+ + H+N+I ++ + +N+T V +I EL + G L +
Sbjct: 58 SREEIER---EVSILRQVLHHNVITLHDVY---ENRTDVVLILELVSGGELFDFLAQKES 111
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIM 164
+ +QIL G+ YLH+ I H DLK +NI + N +K+ D GLA +
Sbjct: 112 LSEEEATSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 165 EQA-NAKSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY---SECRNS 217
E K++ GTPEF+APE+ NY L AD++S G+ +++ P+ ++
Sbjct: 170 EDGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
Query: 218 AQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVPAS-QRLSAKELLMDPFL 267
A I VS S+ + K FI K LV + +RL+ +E L P++
Sbjct: 228 ANI-TAVSYDFDEEFFSQTSEL-AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 113/235 (48%), Gaps = 13/235 (5%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXX 108
S D ++L E + + LKH NI+R ++S ++ + +I +L T G L +
Sbjct: 61 SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHY--LIFDLVTGGELFEDIVAREYY 118
Query: 109 XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFING--NQGEVKIGDLGLATIM-- 164
+QIL + LH H ++HRDLK +N+ + VK+ D GLA +
Sbjct: 119 SEADASHCIQQILEAV--LHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEG 176
Query: 165 EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 223
EQ GTP +++PE L + Y + D+++ G+ +L ++ YP + ++Y++
Sbjct: 177 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGV-ILYILLVGYPPFWDEDQHRLYQQ 235
Query: 224 VSSGIK--PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKN 275
+ +G P+ PE K I K L + S+R++A E L P++ T +
Sbjct: 236 IKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVAS 290
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 115/256 (44%), Gaps = 42/256 (16%)
Query: 39 CQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL 98
CQ +D++L+ E+ + H NI+ +Y S++ + ++ +L + GS+
Sbjct: 53 CQTSMDELLK----------EIQAMSQCHHPNIVSYYTSFVVKDE--LWLVMKLLSGGSV 100
Query: 99 --------RQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQ 150
+ R++L GL YLH + IHRD+K NI + G
Sbjct: 101 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ--IHRDVKAGNILL-GED 157
Query: 151 GEVKIGDLGLATIMEQAN-------AKSVIGTPEFMAPELYDE--NYNELADIYSFGMCM 201
G V+I D G++ + K+ +GTP +MAPE+ ++ Y+ ADI+SFG+
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 217
Query: 202 LEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEV-----KSF---IEKCLVP-A 252
+E+ T PY + ++ P+ + V+D E+ KSF I CL
Sbjct: 218 IELATGAAPYHK-YPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDP 276
Query: 253 SQRLSAKELLMDPFLQ 268
+R +A ELL F Q
Sbjct: 277 EKRPTAAELLRHKFFQ 292
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 116/231 (50%), Gaps = 24/231 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXX 107
S E++ER EV +L+ + H+N+I ++ + +N+T V +I EL + G L +
Sbjct: 58 SREEIER---EVSILRQVLHHNVITLHDVY---ENRTDVVLILELVSGGELFDFLAQKES 111
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIM 164
+ +QIL G+ YLH+ I H DLK +NI + N +K+ D GLA +
Sbjct: 112 LSEEEATSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 165 EQA-NAKSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY---SECRNS 217
E K++ GTPEF+APE+ NY L AD++S G+ +++ P+ ++
Sbjct: 170 EDGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
Query: 218 AQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVPAS-QRLSAKELLMDPFL 267
A I VS S + K FI K LV + +RL+ +E L P++
Sbjct: 228 ANI-TSVSYDFDEEFFSHTSEL-AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 132/266 (49%), Gaps = 21/266 (7%)
Query: 31 VNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNII 89
+ G EVA V+I D Q + L++L+ EV ++K L H NI++ + + + KT+ ++
Sbjct: 37 LTGKEVA---VKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLV 91
Query: 90 TELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGN 149
E + G + Y RQI+S + Y H I+HRDLK +N+ ++ +
Sbjct: 92 MEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY--CHQKFIVHRDLKAENLLLDAD 149
Query: 150 QGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYD-ENYN-ELADIYSFGMCMLEMVT 206
+KI D G + N + G+P + APEL+ + Y+ D++S G+ + +V+
Sbjct: 150 MN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 207 FEYPYSECRNSAQIYKKVSSGIK--PAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMD 264
P+ + +N ++ ++V G P +S + +K F+ ++ S+R + ++++ D
Sbjct: 209 GSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMKD 264
Query: 265 PFLQV---NGTTKNRPLPLPDIVLPR 287
++ V + K PLPD PR
Sbjct: 265 RWMNVGHEDDELKPYVEPLPDYKDPR 290
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 115/256 (44%), Gaps = 42/256 (16%)
Query: 39 CQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL 98
CQ +D++L+ E+ + H NI+ +Y S++ + ++ +L + GS+
Sbjct: 48 CQTSMDELLK----------EIQAMSQCHHPNIVSYYTSFVVKDE--LWLVMKLLSGGSV 95
Query: 99 --------RQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQ 150
+ R++L GL YLH + IHRD+K NI + G
Sbjct: 96 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ--IHRDVKAGNILL-GED 152
Query: 151 GEVKIGDLGLATIMEQAN-------AKSVIGTPEFMAPELYDE--NYNELADIYSFGMCM 201
G V+I D G++ + K+ +GTP +MAPE+ ++ Y+ ADI+SFG+
Sbjct: 153 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 212
Query: 202 LEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEV-----KSF---IEKCLVP-A 252
+E+ T PY + ++ P+ + V+D E+ KSF I CL
Sbjct: 213 IELATGAAPYHK-YPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDP 271
Query: 253 SQRLSAKELLMDPFLQ 268
+R +A ELL F Q
Sbjct: 272 EKRPTAAELLRHKFFQ 287
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 116/231 (50%), Gaps = 24/231 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXX 107
S E++ER EV +L+ + H+N+I ++ + +N+T V +I EL + G L +
Sbjct: 58 SREEIER---EVSILRQVLHHNVITLHDVY---ENRTDVVLILELVSGGELFDFLAQKES 111
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIM 164
+ +QIL G+ YLH+ I H DLK +NI + N +K+ D GLA +
Sbjct: 112 LSEEEATSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 165 EQA-NAKSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY---SECRNS 217
E K++ GTPEF+APE+ NY L AD++S G+ +++ P+ ++
Sbjct: 170 EDGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
Query: 218 AQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVPAS-QRLSAKELLMDPFL 267
A I VS S + K FI K LV + +RL+ +E L P++
Sbjct: 228 ANI-TSVSYDFDEEFFSHTSEL-AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA 117
+E+ +LK L H II+ N + D ++ I+ EL G L +
Sbjct: 64 TEIEILKKLNHPCIIKIKN-FFDAED--YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIM-EQANAKSVIG 174
Q+L + YLH + IIHRDLK +N+ ++ + + +KI D G + I+ E + +++ G
Sbjct: 121 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 178
Query: 175 TPEFMAPELY----DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG--- 227
TP ++APE+ YN D +S G+ + ++ P+SE R + +++SG
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 228 IKPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMDPFLQ 268
P ++V + + + +V R + +E L P+LQ
Sbjct: 239 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA 117
+E+ +LK L H II+ N + D ++ I+ EL G L +
Sbjct: 70 TEIEILKKLNHPCIIKIKN-FFDAED--YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 126
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIM-EQANAKSVIG 174
Q+L + YLH + IIHRDLK +N+ ++ + + +KI D G + I+ E + +++ G
Sbjct: 127 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 184
Query: 175 TPEFMAPELY----DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG--- 227
TP ++APE+ YN D +S G+ + ++ P+SE R + +++SG
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 244
Query: 228 IKPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMDPFLQ 268
P ++V + + + +V R + +E L P+LQ
Sbjct: 245 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 285
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 131/266 (49%), Gaps = 21/266 (7%)
Query: 31 VNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNII 89
+ G EVA V+I D Q + L++L+ EV ++K L H NI++ + + + KT+ ++
Sbjct: 37 LTGKEVA---VKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLV 91
Query: 90 TELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGN 149
E + G + Y RQI+S + Y H I+HRDLK +N+ ++ +
Sbjct: 92 MEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY--CHQKFIVHRDLKAENLLLDAD 149
Query: 150 QGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYD-ENYN-ELADIYSFGMCMLEMVT 206
+KI D G + N + G P + APEL+ + Y+ D++S G+ + +V+
Sbjct: 150 MN-IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 207 FEYPYSECRNSAQIYKKVSSGIK--PAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMD 264
P+ + +N ++ ++V G P +S + +K F+ ++ S+R + ++++ D
Sbjct: 209 GSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMKD 264
Query: 265 PFLQV---NGTTKNRPLPLPDIVLPR 287
++ V + K PLPD PR
Sbjct: 265 RWMNVGHEDDELKPYVEPLPDYKDPR 290
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA 117
+E+ +LK L H II+ N + D ++ I+ EL G L +
Sbjct: 63 TEIEILKKLNHPCIIKIKN-FFDAED--YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 119
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIM-EQANAKSVIG 174
Q+L + YLH + IIHRDLK +N+ ++ + + +KI D G + I+ E + +++ G
Sbjct: 120 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 177
Query: 175 TPEFMAPELY----DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG--- 227
TP ++APE+ YN D +S G+ + ++ P+SE R + +++SG
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 237
Query: 228 IKPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMDPFLQ 268
P ++V + + + +V R + +E L P+LQ
Sbjct: 238 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 278
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 116/231 (50%), Gaps = 24/231 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXX 107
S E++ER EV +L+ + H+N+I ++ + +N+T V +I EL + G L +
Sbjct: 58 SREEIER---EVSILRQVLHHNVITLHDVY---ENRTDVVLILELVSGGELFDFLAQKES 111
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIM 164
+ +QIL G+ YLH+ I H DLK +NI + N +K+ D GLA +
Sbjct: 112 LSEEEATSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 165 EQA-NAKSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY---SECRNS 217
E K++ GTPEF+APE+ NY L AD++S G+ +++ P+ ++
Sbjct: 170 EDGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
Query: 218 AQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVPAS-QRLSAKELLMDPFL 267
A I VS S + K FI K LV + +RL+ +E L P++
Sbjct: 228 ANI-TSVSYDFDEEFFSHTSEL-AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA 117
+E+ +LK L H II+ N + D ++ I+ EL G L +
Sbjct: 64 TEIEILKKLNHPCIIKIKN-FFDAED--YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIM-EQANAKSVIG 174
Q+L + YLH + IIHRDLK +N+ ++ + + +KI D G + I+ E + +++ G
Sbjct: 121 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 178
Query: 175 TPEFMAPELY----DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG--- 227
TP ++APE+ YN D +S G+ + ++ P+SE R + +++SG
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 228 IKPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMDPFLQ 268
P ++V + + + +V R + +E L P+LQ
Sbjct: 239 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA 117
+E+ +LK L H II+ N + D ++ I+ EL G L +
Sbjct: 64 TEIEILKKLNHPCIIKIKN-FFDAED--YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIM-EQANAKSVIG 174
Q+L + YLH + IIHRDLK +N+ ++ + + +KI D G + I+ E + +++ G
Sbjct: 121 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 178
Query: 175 TPEFMAPELY----DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG--- 227
TP ++APE+ YN D +S G+ + ++ P+SE R + +++SG
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 228 IKPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMDPFLQ 268
P ++V + + + +V R + +E L P+LQ
Sbjct: 239 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA 117
+E+ +LK L H II+ N + D ++ I+ EL G L +
Sbjct: 189 TEIEILKKLNHPCIIKIKN-FFDAED--YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 245
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIM-EQANAKSVIG 174
Q+L + YLH + IIHRDLK +N+ ++ + + +KI D G + I+ E + +++ G
Sbjct: 246 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 303
Query: 175 TPEFMAPELY----DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG--- 227
TP ++APE+ YN D +S G+ + ++ P+SE R + +++SG
Sbjct: 304 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 363
Query: 228 IKPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMDPFLQ 268
P ++V + + + +V R + +E L P+LQ
Sbjct: 364 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 116/235 (49%), Gaps = 14/235 (5%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGS-LR 99
++I D+ ++ +++E + E+ +L + + ++Y S++ + + II E GS L
Sbjct: 53 IKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSYL--KGSKLWIIMEYLGGGSALD 110
Query: 100 QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLG 159
R ++IL GL YLHS IHRD+K N+ ++ QG+VK+ D G
Sbjct: 111 LLRAGPFDEFQIATM--LKEILKGLDYLHSEKK--IHRDIKAANVLLS-EQGDVKLADFG 165
Query: 160 LATIMEQANAK--SVIGTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRN 216
+A + K + +GTP +MAPE+ ++ Y+ ADI+S G+ +E+ E P S+
Sbjct: 166 VAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHP 225
Query: 217 SAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELLMDPFLQVN 270
++ + P L K FI+ CL S R +AKELL F+ N
Sbjct: 226 MRVLF--LIPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 278
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 124/264 (46%), Gaps = 23/264 (8%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTV 86
A+ G +VA ++ VL + R+ E+ L+ L+H +II+ Y+ I +++ +
Sbjct: 23 AYHTTTGQKVA-LKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV-IKSKDEII 80
Query: 87 NIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI 146
+I + L Y + +QI+S + Y H H I+HRDLK +N+ +
Sbjct: 81 MVIE--YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLL 136
Query: 147 NGNQGEVKIGDLGLATIMEQAN-AKSVIGTPEFMAPELYDENY--NELADIYSFGMCMLE 203
+ VKI D GL+ IM N K+ G+P + APE+ D++S G+ +
Sbjct: 137 D-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYV 195
Query: 204 MVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL 262
M+ P+ + + ++K +S+G+ L K P I++ L V R+S E++
Sbjct: 196 MLCRRLPFDD-ESIPVLFKNISNGV--YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIM 252
Query: 263 MDPFLQVNGTTKNRPLPLPDIVLP 286
D + +V+ LP+ +LP
Sbjct: 253 QDDWFKVD---------LPEYLLP 267
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 132/266 (49%), Gaps = 21/266 (7%)
Query: 31 VNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNII 89
+ G EVA V+I D Q + L++L+ EV ++K L H NI++ + + + KT+ ++
Sbjct: 30 LTGKEVA---VKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE--VIETEKTLYLV 84
Query: 90 TELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGN 149
E + G + Y RQI+S + Y H I+HRDLK +N+ ++ +
Sbjct: 85 MEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQY--CHQKFIVHRDLKAENLLLDAD 142
Query: 150 QGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYD-ENYN-ELADIYSFGMCMLEMVT 206
+KI D G + N + G+P + APEL+ + Y+ D++S G+ + +V+
Sbjct: 143 MN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 201
Query: 207 FEYPYSECRNSAQIYKKVSSGIK--PAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMD 264
P+ + +N ++ ++V G P +S + +K F+ ++ S+R + ++++ D
Sbjct: 202 GSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL---ILNPSKRGTLEQIMKD 257
Query: 265 PFLQV---NGTTKNRPLPLPDIVLPR 287
++ V + K PLPD PR
Sbjct: 258 RWMNVGHEDDELKPYVEPLPDYKDPR 283
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 115/229 (50%), Gaps = 24/229 (10%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-VNIITELFTSGSLRQYRXXXXXXX 109
E++ER EV +L+ + H NII ++ + +N+T V +I EL + G L +
Sbjct: 60 EEIER---EVSILRQVLHPNIITLHDVY---ENRTDVVLILELVSGGELFDFLAQKESLS 113
Query: 110 XXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQ 166
+ +QIL G+ YLH+ I H DLK +NI + N +K+ D GLA +E
Sbjct: 114 EEEATSFIKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171
Query: 167 -ANAKSVIGTPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY---SECRNSAQ 219
K++ GTPEF+APE+ NY L AD++S G+ +++ P+ ++ A
Sbjct: 172 GVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 229
Query: 220 IYKKVSSGIKPAALSKVKDPEVKSFIEKCLVPAS-QRLSAKELLMDPFL 267
I VS S+ + K FI K LV + +RL+ +E L P++
Sbjct: 230 I-TAVSYDFDEEFFSQTSEL-AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 124/264 (46%), Gaps = 23/264 (8%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTV 86
A+ G +VA ++ VL + R+ E+ L+ L+H +II+ Y+ I +++ +
Sbjct: 27 AYHTTTGQKVA-LKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV-IKSKDEII 84
Query: 87 NIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI 146
+I + L Y + +QI+S + Y H H I+HRDLK +N+ +
Sbjct: 85 MVIE--YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLL 140
Query: 147 NGNQGEVKIGDLGLATIMEQAN-AKSVIGTPEFMAPELYDENY--NELADIYSFGMCMLE 203
+ VKI D GL+ IM N K+ G+P + APE+ D++S G+ +
Sbjct: 141 D-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYV 199
Query: 204 MVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL 262
M+ P+ + + ++K +S+G+ L K P I++ L V R+S E++
Sbjct: 200 MLCRRLPFDD-ESIPVLFKNISNGV--YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIM 256
Query: 263 MDPFLQVNGTTKNRPLPLPDIVLP 286
D + +V+ LP+ +LP
Sbjct: 257 QDDWFKVD---------LPEYLLP 271
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA 117
+E+ +LK L H II+ N + D ++ I+ EL G L +
Sbjct: 203 TEIEILKKLNHPCIIKIKN-FFDAED--YYIVLELMEGGELFDKVVGNKRLKEATCKLYF 259
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIM-EQANAKSVIG 174
Q+L + YLH + IIHRDLK +N+ ++ + + +KI D G + I+ E + +++ G
Sbjct: 260 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 317
Query: 175 TPEFMAPELY----DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG--- 227
TP ++APE+ YN D +S G+ + ++ P+SE R + +++SG
Sbjct: 318 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 377
Query: 228 IKPAALSKVKDPEVKSFIEKCLVPASQRLSAKELLMDPFLQ 268
P ++V + + + +V R + +E L P+LQ
Sbjct: 378 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXX 108
S D ++L E + + LKH+NI+R ++S I ++ ++ +L T G L +
Sbjct: 43 SARDHQKLEREARICRLLKHSNIVRLHDS-ISEEGFHY-LVFDLVTGGELFEDIVAREYY 100
Query: 109 XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI--NGNQGEVKIGDLGLATIME- 165
+QIL + LH H ++HRDLK +N+ + VK+ D GLA ++
Sbjct: 101 SEADASHCIQQILEAV--LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG 158
Query: 166 -QANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 223
Q GTP +++PE L E Y + DI++ G+ +L ++ YP + ++Y++
Sbjct: 159 DQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGV-ILYILLVGYPPFWDEDQHKLYQQ 217
Query: 224 VSSGIK--PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFL 267
+ +G P+ PE K+ I + L + ++R++A E L P++
Sbjct: 218 IKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWV 264
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK--SVIGT 175
R+IL GL YLHS IHRD+K N+ ++ QG+VK+ D G+A + K +GT
Sbjct: 123 REILKGLDYLHSERK--IHRDIKAANVLLS-EQGDVKLADFGVAGQLTDTQIKRNXFVGT 179
Query: 176 PEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALS 234
P +MAPE+ ++ Y+ ADI+S G+ +E+ E P S+ ++ + P L
Sbjct: 180 PFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF--LIPKNSPPTLE 237
Query: 235 KVKDPEVKSFIEKCLVPASQ-RLSAKELLMDPFL 267
K F+E CL + R +AKELL F+
Sbjct: 238 GQHSKPFKEFVEACLNKDPRFRPTAKELLKHKFI 271
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 102/201 (50%), Gaps = 13/201 (6%)
Query: 31 VNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNII 89
+ G EVA ++I D Q +P L++L+ EV ++K L H NI++ + + + KT+ +I
Sbjct: 35 LTGREVA---IKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE--VIETEKTLYLI 89
Query: 90 TELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGN 149
E + G + Y RQI+S + Y H I+HRDLK +N+ ++ +
Sbjct: 90 MEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQY--CHQKRIVHRDLKAENLLLDAD 147
Query: 150 QGEVKIGDLGLAT-IMEQANAKSVIGTPEFMAPELYD-ENYN-ELADIYSFGMCMLEMVT 206
+KI D G + + G+P + APEL+ + Y+ D++S G+ + +V+
Sbjct: 148 MN-IKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 206
Query: 207 FEYPYSECRNSAQIYKKVSSG 227
P+ + +N ++ ++V G
Sbjct: 207 GSLPF-DGQNLKELRERVLRG 226
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 112/233 (48%), Gaps = 13/233 (5%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXX 108
S D ++L E + + LKH NI+R ++S ++ + +I +L T G L +
Sbjct: 50 SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHY--LIFDLVTGGELFEDIVAREYY 107
Query: 109 XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFING--NQGEVKIGDLGLATIM-- 164
+QIL + LH H ++HR+LK +N+ + VK+ D GLA +
Sbjct: 108 SEADASHCIQQILEAV--LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165
Query: 165 EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 223
EQ GTP +++PE L + Y + D+++ G+ +L ++ YP + ++Y++
Sbjct: 166 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGV-ILYILLVGYPPFWDEDQHRLYQQ 224
Query: 224 VSSGIK--PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTT 273
+ +G P+ PE K I K L + S+R++A E L P++ T
Sbjct: 225 IKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTV 277
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 10/166 (6%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
+ E L E+ +LKSL+H+NI+++ + + +I E GSLR+Y +
Sbjct: 54 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER 113
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q
Sbjct: 114 IDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQD 170
Query: 168 NAKSVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
+ P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 171 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 216
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 13/201 (6%)
Query: 31 VNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNII 89
+ G EVA ++I D Q +P L++L+ EV ++K L H NI++ + + + KT+ +I
Sbjct: 38 LTGREVA---IKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE--VIETEKTLYLI 92
Query: 90 TELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGN 149
E + G + Y RQI+S + Y H I+HRDLK +N+ ++ +
Sbjct: 93 MEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQY--CHQKRIVHRDLKAENLLLDAD 150
Query: 150 QGEVKIGDLGLAT-IMEQANAKSVIGTPEFMAPELYD-ENYN-ELADIYSFGMCMLEMVT 206
+KI D G + + G P + APEL+ + Y+ D++S G+ + +V+
Sbjct: 151 MN-IKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 209
Query: 207 FEYPYSECRNSAQIYKKVSSG 227
P+ + +N ++ ++V G
Sbjct: 210 GSLPF-DGQNLKELRERVLRG 229
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 120/249 (48%), Gaps = 14/249 (5%)
Query: 26 KAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT 85
+ + GLE A + + S D ++L E + + L+H NI+R ++S ++
Sbjct: 47 RCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 104
Query: 86 VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIF 145
++ +L T G L + +QIL + Y HS+ I+HR+LK +N+
Sbjct: 105 --LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLL 160
Query: 146 I--NGNQGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYDEN-YNELADIYSFGMCM 201
+ VK+ D GLA + + A GTP +++PE+ ++ Y++ DI++ G+ +
Sbjct: 161 LASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGV-I 219
Query: 202 LEMVTFEYPYSECRNSAQIYKKVSSGI--KPAALSKVKDPEVKSFIEKCL-VPASQRLSA 258
L ++ YP + ++Y ++ +G P+ PE KS I+ L V +R++A
Sbjct: 220 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITA 279
Query: 259 KELLMDPFL 267
+ L P++
Sbjct: 280 DQALKVPWI 288
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 13/227 (5%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXX 108
S D ++L E + + LKH NI+R ++S I ++ ++ +L T G L +
Sbjct: 70 SARDHQKLEREARICRLLKHPNIVRLHDS-ISEEGFHY-LVFDLVTGGELFEDIVAREYY 127
Query: 109 XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFING--NQGEVKIGDLGLATIM-- 164
QIL + ++H HD I+HRDLK +N+ + VK+ D GLA +
Sbjct: 128 SEADASHCIHQILESVNHIHQHD--IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG 185
Query: 165 EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 223
EQ GTP +++PE L + Y + DI++ G+ +L ++ YP + ++Y++
Sbjct: 186 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGV-ILYILLVGYPPFWDEDQHKLYQQ 244
Query: 224 VSSGIK--PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFL 267
+ +G P+ PE K+ I + L + ++R++A + L P++
Sbjct: 245 IKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWV 291
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 103/236 (43%), Gaps = 15/236 (6%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNK 84
Y+AF G EVA R D + +E + E L LKH NII + + N
Sbjct: 24 YRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN- 80
Query: 85 TVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHD-PPIIHRDLKCDN 143
+ ++ E G L + WA QI G+ YLH PIIHRDLK N
Sbjct: 81 -LCLVMEFARGGPLNRV-LSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSN 138
Query: 144 IFI-----NGNQGE--VKIGDLGLATIMEQANAKSVIGTPEFMAPELYDEN-YNELADIY 195
I I NG+ +KI D GLA + S G +MAPE+ + +++ +D++
Sbjct: 139 ILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVW 198
Query: 196 SFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP 251
S+G+ + E++T E P+ A Y + + S +P K +E C P
Sbjct: 199 SYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAK-LMEDCWNP 253
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 114/227 (50%), Gaps = 14/227 (6%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVN-IITELFTSGSLRQYRXXXXX 107
S D ++L E + + L+H NI+R ++S Q ++ + ++ +L T G L +
Sbjct: 44 SARDFQKLEREARICRKLQHPNIVRLHDS---IQEESFHYLVFDLVTGGELFEDIVAREF 100
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI--NGNQGEVKIGDLGLATIME 165
+QIL + Y HS+ I+HR+LK +N+ + VK+ D GLA +
Sbjct: 101 YSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 158
Query: 166 QANA-KSVIGTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 223
+ A GTP +++PE+ ++ Y++ DI++ G+ +L ++ YP + ++Y +
Sbjct: 159 DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGV-ILYILLVGYPPFWDEDQHRLYAQ 217
Query: 224 VSSGI--KPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFL 267
+ +G P+ PE KS I+ L V +R++A + L P++
Sbjct: 218 IKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 264
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 114/227 (50%), Gaps = 14/227 (6%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVN-IITELFTSGSLRQYRXXXXX 107
S D ++L E + + L+H NI+R ++S Q ++ + ++ +L T G L +
Sbjct: 45 SARDFQKLEREARICRKLQHPNIVRLHDS---IQEESFHYLVFDLVTGGELFEDIVAREF 101
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI--NGNQGEVKIGDLGLATIME 165
+QIL + Y HS+ I+HR+LK +N+ + VK+ D GLA +
Sbjct: 102 YSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159
Query: 166 QANA-KSVIGTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 223
+ A GTP +++PE+ ++ Y++ DI++ G+ +L ++ YP + ++Y +
Sbjct: 160 DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGV-ILYILLVGYPPFWDEDQHRLYAQ 218
Query: 224 VSSGI--KPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFL 267
+ +G P+ PE KS I+ L V +R++A + L P++
Sbjct: 219 IKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 114/227 (50%), Gaps = 14/227 (6%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVN-IITELFTSGSLRQYRXXXXX 107
S D ++L E + + L+H NI+R ++S Q ++ + ++ +L T G L +
Sbjct: 45 SARDFQKLEREARICRKLQHPNIVRLHDS---IQEESFHYLVFDLVTGGELFEDIVAREF 101
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI--NGNQGEVKIGDLGLATIME 165
+QIL + Y HS+ I+HR+LK +N+ + VK+ D GLA +
Sbjct: 102 YSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159
Query: 166 QANA-KSVIGTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 223
+ A GTP +++PE+ ++ Y++ DI++ G+ +L ++ YP + ++Y +
Sbjct: 160 DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGV-ILYILLVGYPPFWDEDQHRLYAQ 218
Query: 224 VSSGI--KPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFL 267
+ +G P+ PE KS I+ L V +R++A + L P++
Sbjct: 219 IKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 118/248 (47%), Gaps = 14/248 (5%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTV 86
A+ G +VA ++ VL + R+ E+ L+ L+H +II+ Y+ I +++ +
Sbjct: 33 AYHTTTGQKVA-LKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV-IKSKDEII 90
Query: 87 NIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI 146
+I + L Y + +QI+S + Y H H I+HRDLK +N+ +
Sbjct: 91 MVIE--YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLL 146
Query: 147 NGNQGEVKIGDLGLATIMEQAN-AKSVIGTPEFMAPELYDENY--NELADIYSFGMCMLE 203
+ VKI D GL+ IM N K+ G+P + APE+ D++S G+ +
Sbjct: 147 D-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYV 205
Query: 204 MVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL 262
M+ P+ + + ++K +S+G+ L K P I++ L V R+S E++
Sbjct: 206 MLCRRLPFDD-ESIPVLFKNISNGV--YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIM 262
Query: 263 MDPFLQVN 270
D + +V+
Sbjct: 263 QDDWFKVD 270
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 118/248 (47%), Gaps = 14/248 (5%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTV 86
A+ G +VA ++ VL + R+ E+ L+ L+H +II+ Y+ I +++ +
Sbjct: 32 AYHTTTGQKVA-LKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV-IKSKDEII 89
Query: 87 NIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI 146
+I + L Y + +QI+S + Y H H I+HRDLK +N+ +
Sbjct: 90 MVIE--YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLL 145
Query: 147 NGNQGEVKIGDLGLATIMEQAN-AKSVIGTPEFMAPELYDENY--NELADIYSFGMCMLE 203
+ VKI D GL+ IM N K+ G+P + APE+ D++S G+ +
Sbjct: 146 D-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYV 204
Query: 204 MVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL 262
M+ P+ + + ++K +S+G+ L K P I++ L V R+S E++
Sbjct: 205 MLCRRLPFDD-ESIPVLFKNISNGV--YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIM 261
Query: 263 MDPFLQVN 270
D + +V+
Sbjct: 262 QDDWFKVD 269
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 10/166 (6%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
+ E L E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 55 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 114
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q
Sbjct: 115 IDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQD 171
Query: 168 NAKSVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
+ P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 172 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 10/166 (6%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
+ E L E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 58 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 117
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q
Sbjct: 118 IDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQD 174
Query: 168 NAKSVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
+ P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 175 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 220
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 52 DLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXX 110
D ER E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 88 DFER---EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 144
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q
Sbjct: 145 IKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEX 201
Query: 171 SVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
+ P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 202 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 244
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 10/166 (6%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
+ E L E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 54 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 113
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q
Sbjct: 114 IDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQD 170
Query: 168 NAKSVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
+ P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 171 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 216
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 52 DLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXX 110
D ER E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 60 DFER---EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDH 116
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q
Sbjct: 117 IKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEX 173
Query: 171 SVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
+ P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 174 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 216
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 10/166 (6%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
+ E L E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 56 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 115
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q
Sbjct: 116 IDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQD 172
Query: 168 NAKSVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
+ P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 173 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 218
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 52 DLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXX 110
D ER E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 56 DFER---EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 112
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q
Sbjct: 113 IKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEX 169
Query: 171 SVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
+ P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 170 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 10/166 (6%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
+ E L E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 57 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 116
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q
Sbjct: 117 IDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQD 173
Query: 168 NAKSVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
+ P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 174 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 219
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 10/166 (6%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
+ E L E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 51 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 110
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q
Sbjct: 111 IDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQD 167
Query: 168 NAKSVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
+ P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 168 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 213
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 52 DLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXX 110
D ER E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 55 DFER---EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 111
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q
Sbjct: 112 IKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEX 168
Query: 171 SVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
+ P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 169 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 52 DLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXX 110
D ER E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 57 DFER---EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 113
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q
Sbjct: 114 IKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEX 170
Query: 171 SVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
+ P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 171 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 213
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 127/266 (47%), Gaps = 21/266 (7%)
Query: 31 VNGLEVAWCQVRIDDVLQ-SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNII 89
+ G EVA V+I D Q + L++L+ EV + K L H NI++ + + + KT+ ++
Sbjct: 37 LTGKEVA---VKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFE--VIETEKTLYLV 91
Query: 90 TELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGN 149
E + G + Y RQI+S + Y H I+HRDLK +N+ ++ +
Sbjct: 92 XEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQY--CHQKFIVHRDLKAENLLLDAD 149
Query: 150 QGEVKIGDLGLATIMEQANA-KSVIGTPEFMAPELYD-ENYN-ELADIYSFGMCMLEMVT 206
+KI D G + N + G P + APEL+ + Y+ D++S G+ + +V+
Sbjct: 150 XN-IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 207 FEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPE--VKSFIEKCLVPASQRLSAKELLMD 264
P+ + +N ++ ++V G D E +K F+ ++ S+R + +++ D
Sbjct: 209 GSLPF-DGQNLKELRERVLRGKYRIPFYXSTDCENLLKKFL---ILNPSKRGTLEQIXKD 264
Query: 265 PFLQV---NGTTKNRPLPLPDIVLPR 287
+ V + K PLPD PR
Sbjct: 265 RWXNVGHEDDELKPYVEPLPDYKDPR 290
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 10/166 (6%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
+ E L E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 69 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 128
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q
Sbjct: 129 IDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQD 185
Query: 168 NAKSVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
+ P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 186 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 231
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 10/166 (6%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
+ E L E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 69 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 128
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q
Sbjct: 129 IDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQD 185
Query: 168 NAKSVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
+ P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 186 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 231
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 113/244 (46%), Gaps = 21/244 (8%)
Query: 68 HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 127
H NI++ + + DQ T ++ EL G L + R+++S +
Sbjct: 65 HPNIVKLHEVF-HDQLHTF-LVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVS-- 120
Query: 128 HSHDPPIIHRDLKCDN-IFINGNQG-EVKIGDLGLATIMEQANA--KSVIGTPEFMAPEL 183
H HD ++HRDLK +N +F + N E+KI D G A + N K+ T + APEL
Sbjct: 121 HMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPEL 180
Query: 184 YDEN-YNELADIYSFGMCMLEMVTFEYPYSE------CRNSAQIYKKVSSG---IKPAAL 233
++N Y+E D++S G+ + M++ + P+ C ++ +I KK+ G + A
Sbjct: 181 LNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAW 240
Query: 234 SKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVGAFG 292
V E K I+ L V ++RL L + +LQ + PL PDI L GA
Sbjct: 241 KNVSQ-EAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDI-LGSSGAAV 298
Query: 293 DRCL 296
C+
Sbjct: 299 HTCV 302
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXX 113
E + E+ +SL+H NI+RF + + + II E + G L +
Sbjct: 61 ENVQREIINHRSLRHPNIVRFKEVILTPTH--LAIIMEYASGGELYERICNAGRFSEDEA 118
Query: 114 XGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQG-EVKIGDLGLA-TIMEQANAKS 171
+ +Q+LSG+ Y HS I HRDLK +N ++G+ +KI D G + + + + KS
Sbjct: 119 RFFFQQLLSGVSYCHSMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS 176
Query: 172 VIGTPEFMAPE--LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK 229
+GTP ++APE L E ++AD++S G+ + M+ YP+ E + Y+K I
Sbjct: 177 TVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPF-EDPEEPRDYRKTIQRIL 235
Query: 230 PAALSKVKD----PEVKSFIEKCLV--PASQRLSAKEL 261
S D PE I + V PA+ R+S E+
Sbjct: 236 SVKYSIPDDIRISPECCHLISRIFVADPAT-RISIPEI 272
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 20 VDTSGYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 75
V T G A+ EV N + V+I D+ ++ + E + E+ + K L H N+++FY
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 76 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 135
+ + E + G L + Q+++G++YLH I
Sbjct: 71 GH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--IT 126
Query: 136 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--ENYN 189
HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E +
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 190 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 221
E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 20 VDTSGYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 75
V T G A+ EV N + V+I D+ ++ + E + E+ + K L H N+++FY
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 76 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 135
+ + E + G L + Q+++G++YLH I
Sbjct: 72 GH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--IT 127
Query: 136 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--ENYN 189
HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E +
Sbjct: 128 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 190 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 221
E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
Query: 50 PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX 109
P ++ E+ +L I+ FY ++ D ++I E GSL Q
Sbjct: 107 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIP 164
Query: 110 XXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA 169
+ ++ GL YL I+HRD+K NI +N ++GE+K+ D G++ + + A
Sbjct: 165 EQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA 222
Query: 170 KSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
S +GT +M+PE L +Y+ +DI+S G+ ++EM YP
Sbjct: 223 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 95/192 (49%), Gaps = 19/192 (9%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNK 84
YK ++ G+ VA +V++D +P R E+ L+K LKH NI+R Y+ I +NK
Sbjct: 22 YKGLNKTTGVYVALKEVKLDSEEGTPSTAIR---EISLMKELKHENIVRLYDV-IHTENK 77
Query: 85 TVNIITELFTSGSLRQYRXXXXXXXX------XXXXGWARQILSGLIYLHSHDPPIIHRD 138
+ ++ E F L++Y + Q+L GL + H + I+HRD
Sbjct: 78 -LTLVFE-FMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK--ILHRD 133
Query: 139 LKCDNIFINGNQGEVKIGDLGLATI--MEQANAKSVIGTPEFMAPELY--DENYNELADI 194
LK N+ IN +G++K+GD GLA + S + T + AP++ Y+ DI
Sbjct: 134 LKPQNLLIN-KRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDI 192
Query: 195 YSFGMCMLEMVT 206
+S G + EM+T
Sbjct: 193 WSCGCILAEMIT 204
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 11/167 (6%)
Query: 53 LERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX 112
+E++ +E+ +LKSL H NII+ + + D N + I+ E G L +
Sbjct: 64 MEQIEAEIEVLKSLDHPNIIKIFEVFEDYHN--MYIVMETCEGGELLERIVSAQARGKAL 121
Query: 113 XXGWA----RQILSGLIYLHSHDPPIIHRDLKCDNIFINGN--QGEVKIGDLGLATIMEQ 166
G+ +Q+++ L Y HS ++H+DLK +NI +KI D GLA + +
Sbjct: 122 SEGYVAELMKQMMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS 179
Query: 167 -ANAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYS 212
++ + GT +MAPE++ + DI+S G+ M ++T P++
Sbjct: 180 DEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFT 226
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 52 DLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXX 110
D ER E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 57 DFER---EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 113
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+ QI G+ YL + IHRDL NI + N+ VKIGD GL ++ Q
Sbjct: 114 IKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEF 170
Query: 171 SVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
+ P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 171 FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 213
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 20 VDTSGYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 75
V T G A+ EV N + V+I D+ ++ + E + E+ + K L H N+++FY
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 76 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 135
+ + E + G L + Q+++G++YLH I
Sbjct: 71 GH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--IT 126
Query: 136 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--ENYN 189
HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E +
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 190 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 221
E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 20 VDTSGYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 75
V T G A+ EV N + V+I D+ ++ + E + E+ + K L H N+++FY
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 76 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 135
+ + E + G L + Q+++G++YLH I
Sbjct: 72 GH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--IT 127
Query: 136 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--ENYN 189
HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E +
Sbjct: 128 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 190 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 221
E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 20 VDTSGYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 75
V T G A+ EV N + V+I D+ ++ + E + E+ + K L H N+++FY
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 76 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 135
+ + E + G L + Q+++G++YLH I
Sbjct: 72 GH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--IT 127
Query: 136 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--ENYN 189
HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E +
Sbjct: 128 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 190 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 221
E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 20 VDTSGYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 75
V T G A+ EV N + V+I D+ ++ + E + E+ + K L H N+++FY
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 76 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 135
+ + E + G L + Q+++G++YLH I
Sbjct: 71 GH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--IT 126
Query: 136 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--ENYN 189
HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E +
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 190 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 221
E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 20 VDTSGYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 75
V T G A+ EV N + V+I D+ ++ + E + E+ + K L H N+++FY
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 76 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 135
+ + E + G L + Q+++G++YLH I
Sbjct: 72 GH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--IT 127
Query: 136 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--ENYN 189
HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E +
Sbjct: 128 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 190 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 221
E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
Query: 50 PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX 109
P ++ E+ +L I+ FY ++ D ++I E GSL Q
Sbjct: 55 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKEAKRIP 112
Query: 110 XXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA 169
+ +L GL YL I+HRD+K NI +N ++GE+K+ D G++ + + A
Sbjct: 113 EEILGKVSIAVLRGLAYLREKHQ-IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA 170
Query: 170 KSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
S +GT +MAPE L +Y+ +DI+S G+ ++E+ YP
Sbjct: 171 NSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 92/178 (51%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 104 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIGRFSE 161
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A ++ A
Sbjct: 162 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGATW- 217
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
++ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 218 TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 274
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 20 VDTSGYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 75
V T G A+ EV N + V+I D+ ++ + E + E+ + K L H N+++FY
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 71
Query: 76 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 135
+ + E + G L + Q+++G++YLH I
Sbjct: 72 GH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--IT 127
Query: 136 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--ENYN 189
HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E +
Sbjct: 128 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 186
Query: 190 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 221
E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
Query: 50 PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX 109
P ++ E+ +L I+ FY ++ D ++I E GSL Q
Sbjct: 72 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIP 129
Query: 110 XXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA 169
+ ++ GL YL I+HRD+K NI +N ++GE+K+ D G++ + + A
Sbjct: 130 EQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA 187
Query: 170 KSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
S +GT +M+PE L +Y+ +DI+S G+ ++EM YP
Sbjct: 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 92/178 (51%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+++E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYAPGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +K+ D GLA + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGLAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 20 VDTSGYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 75
V T G A+ EV N + V+I D+ ++ + E + E+ + K L H N+++FY
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 76 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 135
+ + E + G L + Q+++G++YLH I
Sbjct: 71 GH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--IT 126
Query: 136 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--ENYN 189
HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E +
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 190 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 221
E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 20 VDTSGYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 75
V T G A+ EV N + V+I D+ ++ + E + E+ + K L H N+++FY
Sbjct: 10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 69
Query: 76 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 135
+ + E + G L + Q+++G++YLH I
Sbjct: 70 GH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--IT 125
Query: 136 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--ENYN 189
HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E +
Sbjct: 126 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184
Query: 190 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 221
E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 185 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 216
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYMPGGDMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +K+ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIKVADFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
Query: 50 PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX 109
P ++ E+ +L I+ FY ++ D ++I E GSL Q
Sbjct: 45 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIP 102
Query: 110 XXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA 169
+ ++ GL YL I+HRD+K NI +N ++GE+K+ D G++ + + A
Sbjct: 103 EQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA 160
Query: 170 KSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
S +GT +M+PE L +Y+ +DI+S G+ ++EM YP
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 20 VDTSGYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 75
V T G A+ EV N + V+I D+ ++ + E + E+ + K L H N+++FY
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 76 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 135
+ + E + G L + Q+++G++YLH I
Sbjct: 71 GH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--IT 126
Query: 136 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--ENYN 189
HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E +
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 190 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 221
E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +K+ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIKVADFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
Query: 50 PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX 109
P ++ E+ +L I+ FY ++ D ++I E GSL Q
Sbjct: 45 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIP 102
Query: 110 XXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA 169
+ ++ GL YL I+HRD+K NI +N ++GE+K+ D G++ + + A
Sbjct: 103 EQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA 160
Query: 170 KSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
S +GT +M+PE L +Y+ +DI+S G+ ++EM YP
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 8/164 (4%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
+L + H IIR + ++ D Q + +I + G L +A ++
Sbjct: 59 MLSIVTHPFIIRMWGTFQDAQQ--IFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVC 116
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAP 181
L YLHS D II+RDLK +NI ++ N G +KI D G A + + GTP+++AP
Sbjct: 117 LALEYLHSKD--IIYRDLKPENILLDKN-GHIKITDFGFAKYVPDVTY-XLCGTPDYIAP 172
Query: 182 ELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 224
E+ YN+ D +SFG+ + EM+ P+ + N+ + Y+K+
Sbjct: 173 EVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS-NTMKTYEKI 215
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 20 VDTSGYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 75
V T G A+ EV N + V+I D+ ++ + E + E+ + K L H N+++FY
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 76 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 135
+ + E + G L + Q+++G++YLH I
Sbjct: 72 GH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--IT 127
Query: 136 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--ENYN 189
HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E +
Sbjct: 128 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 190 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 221
E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYMPGGDMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +K+ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIKVADFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 20 VDTSGYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 75
V T G A+ EV N + V+I D+ ++ + E + E+ + K L H N+++FY
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 76 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 135
+ + E + G L + Q+++G++YLH I
Sbjct: 71 GH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--IT 126
Query: 136 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--ENYN 189
HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E +
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 190 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 221
E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSXQEY 217
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 52 DLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXX 110
D ER E+ +LKSL+H+NI+++ + + +I E GSLR Y +
Sbjct: 58 DFER---EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 114
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+ QI G+ YL + IHR+L NI + N+ VKIGD GL ++ Q
Sbjct: 115 IKLLQYTSQICKGMEYLGTKR--YIHRNLATRNILVE-NENRVKIGDFGLTKVLPQDKEY 171
Query: 171 SVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
+ P + APE L + ++ +D++SFG+ + E+ T+
Sbjct: 172 YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 214
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
Query: 50 PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX 109
P ++ E+ +L I+ FY ++ D ++I E GSL Q
Sbjct: 45 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIP 102
Query: 110 XXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA 169
+ ++ GL YL I+HRD+K NI +N ++GE+K+ D G++ + + A
Sbjct: 103 EQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA 160
Query: 170 KSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
S +GT +M+PE L +Y+ +DI+S G+ ++EM YP
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
Query: 50 PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXX 109
P ++ E+ +L I+ FY ++ D ++I E GSL Q
Sbjct: 45 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIP 102
Query: 110 XXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA 169
+ ++ GL YL I+HRD+K NI +N ++GE+K+ D G++ + + A
Sbjct: 103 EQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA 160
Query: 170 KSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
S +GT +M+PE L +Y+ +DI+S G+ ++EM YP
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 20 VDTSGYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 75
V T G A+ EV N + V+I D+ ++ + E + E+ + K L H N+++FY
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 76 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 135
+ + E + G L + Q+++G++YLH I
Sbjct: 71 GH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--IT 126
Query: 136 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--ENYN 189
HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E +
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 190 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 221
E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 56 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYR-XXXXXXXXXXXX 114
L E+ +L++L H NI+++ +D + +I E SGSL++Y
Sbjct: 70 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQL 129
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+A QI G+ YL S +HRDL N+ + ++ +VKIGD GL +E +
Sbjct: 130 KYAVQICKGMDYLGSRQ--YVHRDLAARNVLVE-SEHQVKIGDFGLTKAIETDKEXXTVK 186
Query: 175 ----TPEFM-APE-LYDENYNELADIYSFGMCMLEMVTF 207
+P F APE L + +D++SFG+ + E++T+
Sbjct: 187 DDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTY 225
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 20 VDTSGYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 75
V T G A+ EV N + V+I D+ ++ + E + E+ + K L H N+++FY
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 76 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 135
+ + E + G L + Q+++G++YLH I
Sbjct: 71 GH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--IT 126
Query: 136 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--ENYN 189
HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E +
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 190 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 221
E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 20 VDTSGYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 75
V T G A+ EV N + V+I D+ ++ + E + E+ + K L H N+++FY
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 76 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 135
+ + E + G L + Q+++G++YLH I
Sbjct: 71 GH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--IT 126
Query: 136 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--ENYN 189
HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E +
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 190 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 221
E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 9/161 (5%)
Query: 117 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG-- 174
A I+ L +LHS +IHRD+K N+ IN G+VK+ D G++ + + AK++
Sbjct: 159 AVSIVKALEHLHSKLS-VIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDSVAKTIDAGC 216
Query: 175 ----TPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKP 230
PE + PEL + Y+ +DI+S G+ M+E+ +PY Q K+V P
Sbjct: 217 KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP 276
Query: 231 AALSKVKDPEVKSFIEKCLVPAS-QRLSAKELLMDPFLQVN 270
+ E F +CL S +R + EL+ PF ++
Sbjct: 277 QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 317
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 20 VDTSGYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 75
V T G A+ EV N + V+I D+ ++ + E + E+ + K L H N+++FY
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 76 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 135
+ + E + G L + Q+++G++YLH I
Sbjct: 71 GH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--IT 126
Query: 136 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--ENYN 189
HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E +
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 190 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 221
E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 20 VDTSGYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 75
V T G A+ EV N + V+I D+ ++ + E + E+ + K L H N+++FY
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 76 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 135
+ + E + G L + Q+++G++YLH I
Sbjct: 71 GH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--IT 126
Query: 136 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--ENYN 189
HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E +
Sbjct: 127 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 190 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 221
E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 20 VDTSGYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 75
V T G A+ EV N + V+I D+ ++ + E + E+ + K L H N+++FY
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 76 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 135
+ + E + G L + Q+++G++YLH I
Sbjct: 72 GH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--IT 127
Query: 136 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--ENYN 189
HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E +
Sbjct: 128 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 190 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 221
E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 45 DVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR-QYRX 103
DVL PE ++ EV+ + SL H N+IR Y + + ++TEL GSL + R
Sbjct: 57 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL---TPPMKMVTELAPLGSLLDRLRK 113
Query: 104 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 163
+A Q+ G+ YL S IHRDL N+ + + VKIGD GL
Sbjct: 114 HQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRA 170
Query: 164 MEQANAKSVI----GTP-EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNS 217
+ Q + V+ P + APE L ++ +D + FG+ + EM T+ N
Sbjct: 171 LPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 230
Query: 218 AQIYKKV 224
+QI K+
Sbjct: 231 SQILHKI 237
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 56 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYR-XXXXXXXXXXXX 114
L E+ +L++L H NI+++ +D + +I E SGSL++Y
Sbjct: 58 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQL 117
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+A QI G+ YL S +HRDL N+ + ++ +VKIGD GL +E +
Sbjct: 118 KYAVQICKGMDYLGSRQ--YVHRDLAARNVLVE-SEHQVKIGDFGLTKAIETDKEXXTVK 174
Query: 175 ----TPEFM-APE-LYDENYNELADIYSFGMCMLEMVTF 207
+P F APE L + +D++SFG+ + E++T+
Sbjct: 175 DDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTY 213
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 103/220 (46%), Gaps = 10/220 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSRFDEQRTA 115
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + ++ G
Sbjct: 116 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSNGELKIADFGWSVHAPSSRRTTLCG 172
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAAL 233
T +++ PE+ + ++E D++S G+ E + P+ E + Y+++S
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF-EAHTYQETYRRISR--VEFTF 229
Query: 234 SKVKDPEVKSFIEKCLVP-ASQRLSAKELLMDPFLQVNGT 272
+ I + L ASQRL+ E+L P+++ N +
Sbjct: 230 PDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKANSS 269
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 92/178 (51%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+++E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYAPGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D GLA + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIQVTDFGLAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 103/220 (46%), Gaps = 10/220 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSRFDEQRTA 115
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + ++ G
Sbjct: 116 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSNGELKIADFGWSVHAPSSRRDTLCG 172
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAAL 233
T +++ PE+ + ++E D++S G+ E + P+ E + Y+++S
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF-EAHTYQETYRRISR--VEFTF 229
Query: 234 SKVKDPEVKSFIEKCLVP-ASQRLSAKELLMDPFLQVNGT 272
+ I + L ASQRL+ E+L P+++ N +
Sbjct: 230 PDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKANSS 269
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 11/218 (5%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
ED++R E+ ++KSL H NIIR Y ++ D N + ++ EL T G L +
Sbjct: 48 EDVDRFKQEIEIMKSLDHPNIIRLYETFED--NTDIYLVMELCTGGELFERVVHKRVFRE 105
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI--NGNQGEVKIGDLGLATIMEQAN 168
+ +LS + Y H + + HRDLK +N + +K+ D GLA +
Sbjct: 106 SDAARIMKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163
Query: 169 -AKSVIGTPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
++ +GTP +++P++ + Y D +S G+ M+ ++ YP ++ K+ G
Sbjct: 164 MMRTKVGTPYYVSPQVLEGLYGPECDEWSAGV-MMYVLLCGYPPFSAPTDXEVMLKIREG 222
Query: 228 --IKPAALSKVKDPEVKSFIEKCLVPA-SQRLSAKELL 262
P P+ +S I + L + QR+++ + L
Sbjct: 223 TFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQAL 260
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 92/187 (49%), Gaps = 11/187 (5%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V+I D+ ++ + E + E+ + K L H N+++FY + + E + G L
Sbjct: 36 VKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH--RREGNIQYLFLEYCSGGELFD 93
Query: 101 YRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGL 160
+ Q+++G++YLH I HRD+K +N+ ++ + +KI D GL
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLD-ERDNLKISDFGL 150
Query: 161 ATIMEQANAKSVI----GTPEFMAPELYD--ENYNELADIYSFGMCMLEMVTFEYPYSEC 214
AT+ N + ++ GT ++APEL E + E D++S G+ + M+ E P+ +
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 210
Query: 215 RNSAQIY 221
+S Q Y
Sbjct: 211 SDSCQEY 217
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYAPGGEMFSHLRRIGRFSE 141
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +K+ D G A + +
Sbjct: 142 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKRV-KGRTW 197
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 45 DVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR-QYRX 103
DVL PE ++ EV+ + SL H N+IR Y + + ++TEL GSL + R
Sbjct: 47 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL---TPPMKMVTELAPLGSLLDRLRK 103
Query: 104 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 163
+A Q+ G+ YL S IHRDL N+ + + VKIGD GL
Sbjct: 104 HQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRA 160
Query: 164 MEQANAKSVI----GTP-EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNS 217
+ Q + V+ P + APE L ++ +D + FG+ + EM T+ N
Sbjct: 161 LPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
Query: 218 AQIYKKV 224
+QI K+
Sbjct: 221 SQILHKI 227
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIGRFAE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 69 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIGRFSE 126
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 127 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 182
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
++ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 183 TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 239
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 142 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 197
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
++ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 198 TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 45 DVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR-QYRX 103
DVL PE ++ EV+ + SL H N+IR Y + + ++TEL GSL + R
Sbjct: 57 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL---TPPMKMVTELAPLGSLLDRLRK 113
Query: 104 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 163
+A Q+ G+ YL S IHRDL N+ + + VKIGD GL
Sbjct: 114 HQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRA 170
Query: 164 MEQANAKSVI----GTP-EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNS 217
+ Q + V+ P + APE L ++ +D + FG+ + EM T+ N
Sbjct: 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 230
Query: 218 AQIYKKV 224
+QI K+
Sbjct: 231 SQILHKI 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 104 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIGRFXE 161
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 162 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 217
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 218 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 274
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 13/227 (5%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXX 108
S D ++L E + + LKH NI+R ++S I ++ ++ +L T G L +
Sbjct: 43 SARDHQKLEREARICRLLKHPNIVRLHDS-ISEEGFHY-LVFDLVTGGELFEDIVAREYY 100
Query: 109 XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQ--GEVKIGDLGLATIME- 165
+QIL + H H I+HRDLK +N+ + VK+ D GLA ++
Sbjct: 101 SEADASHCIQQILESVN--HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQG 158
Query: 166 -QANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 223
Q GTP +++PE L + Y + D+++ G+ +L ++ YP + ++Y++
Sbjct: 159 DQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGV-ILYILLVGYPPFWDEDQHRLYQQ 217
Query: 224 VSSGIK--PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFL 267
+ +G P+ PE K I K L + ++R++A E L P++
Sbjct: 218 IKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 11/218 (5%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
ED++R E+ ++KSL H NIIR Y ++ D N + ++ EL T G L +
Sbjct: 65 EDVDRFKQEIEIMKSLDHPNIIRLYETFED--NTDIYLVMELCTGGELFERVVHKRVFRE 122
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFI--NGNQGEVKIGDLGLATIMEQAN 168
+ +LS + Y H + + HRDLK +N + +K+ D GLA +
Sbjct: 123 SDAARIMKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 180
Query: 169 -AKSVIGTPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
++ +GTP +++P++ + Y D +S G+ M+ ++ YP ++ K+ G
Sbjct: 181 MMRTKVGTPYYVSPQVLEGLYGPECDEWSAGV-MMYVLLCGYPPFSAPTDXEVMLKIREG 239
Query: 228 --IKPAALSKVKDPEVKSFIEKCLVPA-SQRLSAKELL 262
P P+ +S I + L + QR+++ + L
Sbjct: 240 TFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQAL 277
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIGRFXE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIGRFSE 141
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 142 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 197
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIGRFXE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 6/113 (5%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGT 175
+A QI+ YLHS D +I+RDLK +N+ I+ QG +K+ D G A + + + GT
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIKVADFGFAKRV-KGRTWXLCGT 202
Query: 176 PEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
PE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADEPIQIYEKIVSG 253
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 78 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIGRFXE 135
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 136 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 191
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 192 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 248
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSN--LYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSN--LYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIGRFXE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 14/207 (6%)
Query: 64 KSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSG 123
+SL+H NI+RF + + + I+ E + G L + + +Q++SG
Sbjct: 70 RSLRHPNIVRFKEVILTPTH--LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 124 LIYLHSHDPPIIHRDLKCDNIFINGNQG-EVKIGDLGL--ATIMEQANAKSVIGTPEFMA 180
+ Y H+ + HRDLK +N ++G+ +KI D G A+++ + KS +GTP ++A
Sbjct: 128 VSYAHAMQ--VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVL-HSQPKSAVGTPAYIA 184
Query: 181 PE--LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS--GIKPAALSKV 236
PE L E ++AD++S G+ + M+ YP+ + K + ++ A V
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYV 244
Query: 237 K-DPEVKSFIEKCLVP-ASQRLSAKEL 261
PE + I + V ++R+S E+
Sbjct: 245 HISPECRHLISRIFVADPAKRISIPEI 271
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYAPGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +K+ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 12/207 (5%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
LLK++KH ++ + S+ + + + G L + +A +I
Sbjct: 92 LLKNVKHPFLVGLHFSF--QTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIA 149
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA--TIMEQANAKSVIGTPEFM 179
S L YLHS + I++RDLK +NI ++ +QG + + D GL I + + GTPE++
Sbjct: 150 SALGYLHSLN--IVYRDLKPENILLD-SQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYL 206
Query: 180 APE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD 238
APE L+ + Y+ D + G + EM+ + P RN+A++Y + + KP L
Sbjct: 207 APEVLHKQPYDRTVDWWCLGAVLYEML-YGLPPFYSRNTAEMYDNILN--KPLQLKPNIT 263
Query: 239 PEVKSFIEKCLVP-ASQRLSAKELLMD 264
+ +E L ++RL AK+ M+
Sbjct: 264 NSARHLLEGLLQKDRTKRLGAKDDFME 290
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSN--LYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 45 DVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR-QYRX 103
DVL PE ++ EV+ + SL H N+IR Y + + ++TEL GSL + R
Sbjct: 51 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL---TPPMKMVTELAPLGSLLDRLRK 107
Query: 104 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 163
+A Q+ G+ YL S IHRDL N+ + + VKIGD GL
Sbjct: 108 HQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRA 164
Query: 164 MEQANAKSVI----GTP-EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNS 217
+ Q + V+ P + APE L ++ +D + FG+ + EM T+ N
Sbjct: 165 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 224
Query: 218 AQIYKKV 224
+QI K+
Sbjct: 225 SQILHKI 231
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYAPGGEMFSHLRRIGRFXE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +K+ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLIID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 118
E+ +L++L H +I+++ D K+V ++ E GSLR Y +A+
Sbjct: 60 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL-FAQ 118
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----G 174
QI G+ YLH+ IHR L N+ ++ N VKIGD GLA + + + +
Sbjct: 119 QICEGMAYLHAQH--YIHRALAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDGD 175
Query: 175 TPEFM-APELYDE-NYNELADIYSFGMCMLEMVTF 207
+P F APE E + +D++SFG+ + E++T+
Sbjct: 176 SPVFWYAPECLKECKFYYASDVWSFGVTLYELLTY 210
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 118
E+ +L++L H +I+++ D K+V ++ E GSLR Y +A+
Sbjct: 61 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL-FAQ 119
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----G 174
QI G+ YLH+ IHR L N+ ++ N VKIGD GLA + + + +
Sbjct: 120 QICEGMAYLHAQH--YIHRALAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDGD 176
Query: 175 TPEFM-APELYDE-NYNELADIYSFGMCMLEMVTF 207
+P F APE E + +D++SFG+ + E++T+
Sbjct: 177 SPVFWYAPECLKECKFYYASDVWSFGVTLYELLTY 211
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVI 173
+ QI+SGL +LH + II+RDLK +N+ ++ + G V+I DLGLA ++ Q K
Sbjct: 294 YTAQIVSGLEHLHQRN--IIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 174 GTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPY 211
GTP FMAPE L E Y+ D ++ G+ + EM+ P+
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVI 173
+ QI+SGL +LH + II+RDLK +N+ ++ + G V+I DLGLA ++ Q K
Sbjct: 294 YTAQIVSGLEHLHQRN--IIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 174 GTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPY 211
GTP FMAPE L E Y+ D ++ G+ + EM+ P+
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 45 DVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR-QYRX 103
DVL PE ++ EV+ + SL H N+IR Y + + ++TEL GSL + R
Sbjct: 47 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL---TPPMKMVTELAPLGSLLDRLRK 103
Query: 104 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 163
+A Q+ G+ YL S IHRDL N+ + + VKIGD GL
Sbjct: 104 HQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRA 160
Query: 164 MEQANAKSVI----GTP-EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNS 217
+ Q + V+ P + APE L ++ +D + FG+ + EM T+ N
Sbjct: 161 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
Query: 218 AQIYKKV 224
+QI K+
Sbjct: 221 SQILHKI 227
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVI 173
+ QI+SGL +LH + II+RDLK +N+ ++ + G V+I DLGLA ++ Q K
Sbjct: 294 YTAQIVSGLEHLHQRN--IIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 174 GTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPY 211
GTP FMAPE L E Y+ D ++ G+ + EM+ P+
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 104 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIGRFSE 161
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 162 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 217
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 218 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 274
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 70 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIGRFSE 127
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 128 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-EQGYIQVTDFGFAKRV-KGRTW 183
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 184 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 240
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 45 DVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR-QYRX 103
DVL PE ++ EV+ + SL H N+IR Y + + ++TEL GSL + R
Sbjct: 51 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL---TPPMKMVTELAPLGSLLDRLRK 107
Query: 104 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 163
+A Q+ G+ YL S IHRDL N+ + + VKIGD GL
Sbjct: 108 HQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRA 164
Query: 164 MEQANAKSVI----GTP-EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNS 217
+ Q + V+ P + APE L ++ +D + FG+ + EM T+ N
Sbjct: 165 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 224
Query: 218 AQIYKKV 224
+QI K+
Sbjct: 225 SQILHKI 231
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 142 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 197
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 142 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 197
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 13/227 (5%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXX 108
S D ++L E + + LKH NI+R ++S I ++ ++ +L T G L +
Sbjct: 43 SARDHQKLEREARICRLLKHPNIVRLHDS-ISEEGFHY-LVFDLVTGGELFEDIVAREYY 100
Query: 109 XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQ--GEVKIGDLGLATIME- 165
+QIL + H H I+HRDLK +N+ + VK+ D GLA ++
Sbjct: 101 SEADASHCIQQILESVN--HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQG 158
Query: 166 -QANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 223
Q GTP +++PE L + Y + D+++ G+ +L ++ YP + ++Y++
Sbjct: 159 DQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGV-ILYILLVGYPPFWDEDQHRLYQQ 217
Query: 224 VSSGIK--PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFL 267
+ +G P+ PE K I K L + ++R++A E L P++
Sbjct: 218 IKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 142 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 197
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 142 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 197
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 118
E+ +L++L H +II++ D K++ ++ E GSLR Y +A+
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL-FAQ 124
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----G 174
QI G+ YLHS IHR+L N+ ++ N VKIGD GLA + + + +
Sbjct: 125 QICEGMAYLHSQH--YIHRNLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 175 TPEFM-APELYDE-NYNELADIYSFGMCMLEMVT 206
+P F APE E + +D++SFG+ + E++T
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVI 173
+ QI+SGL +LH + II+RDLK +N+ ++ + G V+I DLGLA ++ Q K
Sbjct: 294 YTAQIVSGLEHLHQRN--IIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 174 GTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPY 211
GTP FMAPE L E Y+ D ++ G+ + EM+ P+
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 76 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIGRFSE 133
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 134 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 189
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 190 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 246
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 45 DVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR-QYRX 103
DVL PE ++ EV+ + SL H N+IR Y + + ++TEL GSL + R
Sbjct: 47 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL---TPPMKMVTELAPLGSLLDRLRK 103
Query: 104 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 163
+A Q+ G+ YL S IHRDL N+ + + VKIGD GL
Sbjct: 104 HQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRA 160
Query: 164 MEQANAKSVI----GTP-EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNS 217
+ Q + V+ P + APE L ++ +D + FG+ + EM T+ N
Sbjct: 161 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
Query: 218 AQIYKKV 224
+QI K+
Sbjct: 221 SQILHKI 227
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 76 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIGRFXE 133
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 134 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 189
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 190 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 246
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 22/227 (9%)
Query: 53 LERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX 112
+E++Y E+ +LK L H N+++ D + ++ EL G + +
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 113 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA--K 170
+ + ++ G+ YLH IIHRD+K N+ + G G +KI D G++ + ++A
Sbjct: 140 RF-YFQDLIKGIEYLHYQK--IIHRDIKPSNLLV-GEDGHIKIADFGVSNEFKGSDALLS 195
Query: 171 SVIGTPEFMAPELYDENYNELA----DIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS 226
+ +GTP FMAPE E + D+++ G+ + V + P+ + R + S
Sbjct: 196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC-----LHS 250
Query: 227 GIKPAALSKVKDPEV----KSFIEKCL--VPASQRLSAKELLMDPFL 267
IK AL P++ K I + L P S R+ E+ + P++
Sbjct: 251 KIKSQALEFPDQPDIAEDLKDLITRMLDKNPES-RIVVPEIKLHPWV 296
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 85/161 (52%), Gaps = 14/161 (8%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVI 173
+ +I+S L YLHS + +++RDLK +N+ ++ + G +KI D GL I + A K+
Sbjct: 256 YGAEIVSALDYLHS-EKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTFC 313
Query: 174 GTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA 232
GTPE++APE+ ++N Y D + G+ M EM+ P+ ++ ++++ + ++
Sbjct: 314 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLFELIL--MEEIR 370
Query: 233 LSKVKDPEVKSFIEKCLVP-ASQRLS-----AKELLMDPFL 267
+ PE KS + L QRL AKE++ F
Sbjct: 371 FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 411
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIGRFXE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIGRFXE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVPGGEMFSHLRRIGRFXE 141
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 142 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 197
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 43 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 100
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 101 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 156
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 157 NLAVNED-SELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 214
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 215 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 262
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 85/161 (52%), Gaps = 14/161 (8%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVI 173
+ +I+S L YLHS + +++RDLK +N+ ++ + G +KI D GL I + A K+
Sbjct: 253 YGAEIVSALDYLHS-EKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTFC 310
Query: 174 GTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA 232
GTPE++APE+ ++N Y D + G+ M EM+ P+ ++ ++++ + ++
Sbjct: 311 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLFELIL--MEEIR 367
Query: 233 LSKVKDPEVKSFIEKCLVP-ASQRLS-----AKELLMDPFL 267
+ PE KS + L QRL AKE++ F
Sbjct: 368 FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 88/165 (53%), Gaps = 16/165 (9%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVI 173
+ +I+S L YLHS D +++RD+K +N+ ++ + G +KI D GL I + A K+
Sbjct: 113 YGAEIVSALEYLHSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFC 169
Query: 174 GTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA 232
GTPE++APE+ ++N Y D + G+ M EM+ P+ ++ ++++ + ++
Sbjct: 170 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELIL--MEEIR 226
Query: 233 LSKVKDPEVKSFIEKCLVP-ASQRLS-----AKELLMDP-FLQVN 270
+ PE KS + L QRL AKE++ FL +N
Sbjct: 227 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 271
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 88/165 (53%), Gaps = 16/165 (9%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVI 173
+ +I+S L YLHS D +++RD+K +N+ ++ + G +KI D GL I + A K+
Sbjct: 110 YGAEIVSALEYLHSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFC 166
Query: 174 GTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA 232
GTPE++APE+ ++N Y D + G+ M EM+ P+ ++ ++++ + ++
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELIL--MEEIR 223
Query: 233 LSKVKDPEVKSFIEKCLVP-ASQRLS-----AKELLMDP-FLQVN 270
+ PE KS + L QRL AKE++ FL +N
Sbjct: 224 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 88/165 (53%), Gaps = 16/165 (9%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVI 173
+ +I+S L YLHS D +++RD+K +N+ ++ + G +KI D GL I + A K+
Sbjct: 110 YGAEIVSALEYLHSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFC 166
Query: 174 GTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA 232
GTPE++APE+ ++N Y D + G+ M EM+ P+ ++ ++++ + ++
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELIL--MEEIR 223
Query: 233 LSKVKDPEVKSFIEKCLVP-ASQRLS-----AKELLMDP-FLQVN 270
+ PE KS + L QRL AKE++ FL +N
Sbjct: 224 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + +M YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 41 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 99 FNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 155 NLAVNEDX-ELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 20 VDTSGYKAFDEV----NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFY 75
V T G A+ EV N + V+I D+ ++ + E + E+ + L H N+++FY
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFY 71
Query: 76 NSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPII 135
+ + E + G L + Q+++G++YLH I
Sbjct: 72 GH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG--IT 127
Query: 136 HRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----GTPEFMAPELYD--ENYN 189
HRD+K +N+ ++ + +KI D GLAT+ N + ++ GT ++APEL E +
Sbjct: 128 HRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 190 ELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 221
E D++S G+ + M+ E P+ + +S Q Y
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 47 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 104
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 105 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 160
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 161 NLAVNED-SELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 219 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 266
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 41 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 99 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE--LYDENYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE L +YN+ DI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCI 212
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 45 DVLQSPEDLERLYSEVHLLK-SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 103
DV+ +D+E E +L + +H + + ++ +N + + E G L +
Sbjct: 53 DVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN--LFFVMEYLNGGDLMYHIQ 110
Query: 104 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-- 161
+A +I+ GL +LHS I++RDLK DNI ++ + G +KI D G+
Sbjct: 111 SCHKFDLSRATFYAAEIILGLQFLHSKG--IVYRDLKLDNILLDKD-GHIKIADFGMCKE 167
Query: 162 TIMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQI 220
++ A GTP+++APE L + YN D +SFG+ + EM+ + P+ ++ ++
Sbjct: 168 NMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF-HGQDEEEL 226
Query: 221 YK--KVSSGIKPAALSK-VKDPEVKSFI 245
+ ++ + P L K KD VK F+
Sbjct: 227 FHSIRMDNPFYPRWLEKEAKDLLVKLFV 254
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 45 DVLQSPEDLERLYSEVHLLK-SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 103
DV+ +D+E E +L + +H + + ++ +N + + E G L +
Sbjct: 54 DVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN--LFFVMEYLNGGDLMYHIQ 111
Query: 104 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-- 161
+A +I+ GL +LHS I++RDLK DNI ++ + G +KI D G+
Sbjct: 112 SCHKFDLSRATFYAAEIILGLQFLHSKG--IVYRDLKLDNILLDKD-GHIKIADFGMCKE 168
Query: 162 TIMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQI 220
++ A GTP+++APE L + YN D +SFG+ + EM+ + P+ ++ ++
Sbjct: 169 NMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF-HGQDEEEL 227
Query: 221 YK--KVSSGIKPAALSK-VKDPEVKSFI 245
+ ++ + P L K KD VK F+
Sbjct: 228 FHSIRMDNPFYPRWLEKEAKDLLVKLFV 255
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 53 AFDTKTGLRVA--VKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 110
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 111 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 166
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 167 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 224
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 225 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 272
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 52 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 109
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 110 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 165
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 166 NLAVNEDX-ELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 223
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 224 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 271
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 6/113 (5%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGT 175
+A QI+ YLHS D +I+RDLK +N+ I+ QG +K+ D G A + + + GT
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKRV-KGRTWXLCGT 202
Query: 176 PEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
PE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 6/113 (5%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGT 175
+A QI+ YLHS D +I+RDLK +N+ I+ QG +K+ D G A + + + GT
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKRV-KGRTWXLCGT 202
Query: 176 PEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
PE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 6/113 (5%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGT 175
+A QI+ YLHS D +I+RDLK +N+ I+ QG +K+ D G A + + + GT
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKRV-KGRTWXLCGT 202
Query: 176 PEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
PE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 128/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 23 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 78
Query: 84 KTVNIITELFTSGSLRQYRXXXXXX--XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F S L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 79 KLYLVFE--FLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 134
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPE--LYDENYNELADIYS 196
+N+ IN +G +K+ D GLA + + V+ T + APE L + Y+ DI+S
Sbjct: 135 ENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWS 192
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 193 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 252
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 253 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 128/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 21 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 76
Query: 84 KTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F S L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 77 KLYLVFE--FLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 132
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPE--LYDENYNELADIYS 196
+N+ IN +G +K+ D GLA + + V+ T + APE L + Y+ DI+S
Sbjct: 133 ENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWS 190
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 191 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 250
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 251 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 12/206 (5%)
Query: 64 KSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSG 123
+SL+H NI+RF + + + I+ E + G L + + +Q++SG
Sbjct: 70 RSLRHPNIVRFKEVILTPTH--LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 124 LIYLHSHDPPIIHRDLKCDNIFINGNQG-EVKIGDLGLA-TIMEQANAKSVIGTPEFMAP 181
+ Y H+ + HRDLK +N ++G+ +KI D G + + + + KS +GTP ++AP
Sbjct: 128 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 185
Query: 182 E--LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS--GIKPAALSKVK 237
E L E ++AD++S G+ + M+ YP+ + K + ++ A V
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVH 245
Query: 238 -DPEVKSFIEKCLVP-ASQRLSAKEL 261
PE + I + V ++R+S E+
Sbjct: 246 ISPECRHLISRIFVADPAKRISIPEI 271
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 118
E+ +L++L H +II++ D K++ ++ E GSLR Y +A+
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL-FAQ 124
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----G 174
QI G+ YLH+ IHR+L N+ ++ N VKIGD GLA + + + +
Sbjct: 125 QICEGMAYLHAQH--YIHRNLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 175 TPEFM-APELYDE-NYNELADIYSFGMCMLEMVT 206
+P F APE E + +D++SFG+ + E++T
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 41 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 99 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 108/227 (47%), Gaps = 16/227 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
++D +GL++A ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 70 SYDVKSGLKIA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEE 127
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 128 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 183
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN DI+S G
Sbjct: 184 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCI 241
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFI 245
M E++T +P ++ N Q +++ + +S++ E +++I
Sbjct: 242 MAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYI 288
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 46 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 103
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 104 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 159
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 160 NLAVNEDX-ELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 217
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 218 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 265
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 53 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 110
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 111 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 166
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 167 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 224
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 225 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 272
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 41 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 99 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 64 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 121
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 122 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 177
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 178 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 235
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 236 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 283
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 53 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 110
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 111 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 166
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 167 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 224
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 225 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 272
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYAPGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 41 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 99 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDD-EMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 61 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 118
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 119 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 174
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 175 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 232
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 233 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 280
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 41 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 99 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 43 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 100
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 101 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 156
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 157 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 214
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 215 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 262
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 46 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 103
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 104 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 159
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 160 NLAVNEDX-ELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 217
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 218 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 265
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 24/211 (11%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
++ L H ++ Y ++ DD+ + +G L +Y + +I+
Sbjct: 88 VMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIV 145
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPE 177
S L YLH IIHRDLK +NI +N + ++I D G A ++ +QA A +GT +
Sbjct: 146 SALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 178 FMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK-----PA 231
+++PEL E + + +D+++ G + ++V P+ N I++K+ IK PA
Sbjct: 203 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPA 258
Query: 232 ALSKVKDPEVKSFIEKCLV-PASQRLSAKEL 261
A P+ + +EK LV A++RL +E+
Sbjct: 259 AFF----PKARDLVEKLLVLDATKRLGCEEM 285
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 41 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 99 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 9/161 (5%)
Query: 117 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG-- 174
A I+ L +LHS +IHRD+K N+ IN G+VK+ D G++ + AK +
Sbjct: 115 AVSIVKALEHLHSK-LSVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDDVAKDIDAGC 172
Query: 175 ----TPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKP 230
PE + PEL + Y+ +DI+S G+ M+E+ +PY Q K+V P
Sbjct: 173 KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP 232
Query: 231 AALSKVKDPEVKSFIEKCLVPAS-QRLSAKELLMDPFLQVN 270
+ E F +CL S +R + EL+ PF ++
Sbjct: 233 QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 273
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 41 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 99 FNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 137
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + ++ G
Sbjct: 138 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCG 194
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 245
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 41 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 99 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 43 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 100
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 101 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 156
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 157 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 214
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 215 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 262
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 43 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 100
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 101 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 156
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 157 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 214
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 215 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 262
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 46 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 103
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 104 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 159
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 160 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 217
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 218 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 265
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 12/206 (5%)
Query: 64 KSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSG 123
+SL+H NI+RF + + + I+ E + G L + + +Q++SG
Sbjct: 69 RSLRHPNIVRFKEVILTPTH--LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 126
Query: 124 LIYLHSHDPPIIHRDLKCDNIFINGNQG-EVKIGDLGLA-TIMEQANAKSVIGTPEFMAP 181
+ Y H+ + HRDLK +N ++G+ +KI D G + + + + KS +GTP ++AP
Sbjct: 127 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 184
Query: 182 E--LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS--GIKPAALSKVK 237
E L E ++AD++S G+ + M+ YP+ + K + ++ A V
Sbjct: 185 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVH 244
Query: 238 -DPEVKSFIEKCLVP-ASQRLSAKEL 261
PE + I + V ++R+S E+
Sbjct: 245 ISPECRHLISRIFVADPAKRISIPEI 270
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 52 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 109
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 110 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 165
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 166 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 223
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 224 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 271
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 40 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 97
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 98 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 153
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 154 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 211
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 212 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 259
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 47 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 104
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 105 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 160
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 161 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 219 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 266
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 39 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 96
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 97 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 152
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 153 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 210
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 211 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 258
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 48 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 106 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 161
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 162 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 219
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 220 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 267
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 60 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 117
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 118 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 173
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 174 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 231
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 232 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 279
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 41 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 99 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 41 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 99 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 64 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 121
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 122 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 177
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 178 NLAVNED-CELKILDFGLARHTDD-EMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 235
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 236 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 283
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 38 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 95
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 96 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 151
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 152 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 209
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 210 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 257
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 37 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 94
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 95 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 150
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 151 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 208
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 209 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 256
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 16/165 (9%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVI 173
+ +I+S L YLHS D +++RD+K +N+ ++ + G +KI D GL I + A K
Sbjct: 110 YGAEIVSALEYLHSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFC 166
Query: 174 GTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA 232
GTPE++APE+ ++N Y D + G+ M EM+ P+ ++ ++++ + ++
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELIL--MEEIR 223
Query: 233 LSKVKDPEVKSFIEKCLVP-ASQRLS-----AKELLMDP-FLQVN 270
+ PE KS + L QRL AKE++ FL +N
Sbjct: 224 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 47 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 104
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 105 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 160
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 161 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 219 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 266
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 16/165 (9%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVI 173
+ +I+S L YLHS D +++RD+K +N+ ++ + G +KI D GL I + A K
Sbjct: 115 YGAEIVSALEYLHSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFC 171
Query: 174 GTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA 232
GTPE++APE+ ++N Y D + G+ M EM+ P+ ++ ++++ + ++
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELIL--MEEIR 228
Query: 233 LSKVKDPEVKSFIEKCLVP-ASQRLS-----AKELLMDP-FLQVN 270
+ PE KS + L QRL AKE++ FL +N
Sbjct: 229 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 273
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 16/165 (9%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVI 173
+ +I+S L YLHS D +++RD+K +N+ ++ + G +KI D GL I + A K
Sbjct: 110 YGAEIVSALEYLHSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFC 166
Query: 174 GTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA 232
GTPE++APE+ ++N Y D + G+ M EM+ P+ ++ ++++ + ++
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELIL--MEEIR 223
Query: 233 LSKVKDPEVKSFIEKCLVP-ASQRLS-----AKELLMDP-FLQVN 270
+ PE KS + L QRL AKE++ FL +N
Sbjct: 224 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 38 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 95
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 96 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 151
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 152 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 209
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 210 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 257
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 16/165 (9%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVI 173
+ +I+S L YLHS D +++RD+K +N+ ++ + G +KI D GL I + A K
Sbjct: 110 YGAEIVSALEYLHSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFC 166
Query: 174 GTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA 232
GTPE++APE+ ++N Y D + G+ M EM+ P+ ++ ++++ + ++
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELIL--MEEIR 223
Query: 233 LSKVKDPEVKSFIEKCLVP-ASQRLS-----AKELLMDP-FLQVN 270
+ PE KS + L QRL AKE++ FL +N
Sbjct: 224 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 46 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 103
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 104 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 159
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 160 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 217
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 218 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 265
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 118
E+ +L++L H +II++ D ++ ++ E GSLR Y +A+
Sbjct: 83 EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLL-FAQ 141
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI----G 174
QI G+ YLH+ IHRDL N+ ++ N VKIGD GLA + + + +
Sbjct: 142 QICEGMAYLHAQH--YIHRDLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEXYRVREDGD 198
Query: 175 TPEFM-APELYDE-NYNELADIYSFGMCMLEMVT 206
+P F APE E + +D++SFG+ + E++T
Sbjct: 199 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE +APE + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 8/178 (4%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+ +E +E +L+++ +++ S+ D+ N + ++ E G + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
+A QI+ YLHS D +I+RDLK +N+ I+ QG +++ D G A + +
Sbjct: 141 PHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRV-KGRTW 196
Query: 171 SVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GTPE++AP + + YN+ D ++ G+ + EM YP QIY+K+ SG
Sbjct: 197 XLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVI 173
+ +I+S L YLHS + +++RDLK +N+ ++ + G +KI D GL I + A K
Sbjct: 115 YGAEIVSALDYLHS-EKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFC 172
Query: 174 GTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA 232
GTPE++APE+ ++N Y D + G+ M EM+ P+ ++ ++++ + ++
Sbjct: 173 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLFELIL--MEEIR 229
Query: 233 LSKVKDPEVKSFIEKCLVP-ASQRLS-----AKELLMDPFL 267
+ PE KS + L QRL AKE++ F
Sbjct: 230 FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 270
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVI 173
+ +I+S L YLHS + +++RDLK +N+ ++ + G +KI D GL I + A K
Sbjct: 113 YGAEIVSALDYLHS-EKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFC 170
Query: 174 GTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA 232
GTPE++APE+ ++N Y D + G+ M EM+ P+ ++ ++++ + ++
Sbjct: 171 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLFELIL--MEEIR 227
Query: 233 LSKVKDPEVKSFIEKCLVP-ASQRLS-----AKELLMDPFL 267
+ PE KS + L QRL AKE++ F
Sbjct: 228 FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 268
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 48 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 106 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 161
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + T + APE+ +YN+ DI+S G
Sbjct: 162 NLAVNED-CELKILDFGLAR-HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 219
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 220 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 267
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 48 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 106 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 161
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + T + APE+ +YN+ DI+S G
Sbjct: 162 NLAVNED-CELKILDFGLAR-HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 219
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 220 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 267
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVI 173
+ +I+S L YLHS + +++RDLK +N+ ++ + G +KI D GL I + A K
Sbjct: 114 YGAEIVSALDYLHS-EKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFC 171
Query: 174 GTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA 232
GTPE++APE+ ++N Y D + G+ M EM+ P+ ++ ++++ + ++
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLFELIL--MEEIR 228
Query: 233 LSKVKDPEVKSFIEKCLVP-ASQRLS-----AKELLMDPFL 267
+ PE KS + L QRL AKE++ F
Sbjct: 229 FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 8/183 (4%)
Query: 46 VLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXX 105
VL+ D + + +E+ +L L H NII+ I + ++++ EL T G L
Sbjct: 85 VLKKTVDKKIVRTEIGVLLRLSHPNIIKLKE--IFETPTEISLVLELVTGGELFDRIVEK 142
Query: 106 XXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATI 163
+QIL + YLH + I+HRDLK +N+ +KI D GL+ I
Sbjct: 143 GYYSERDAADAVKQILEAVAYLHENG--IVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200
Query: 164 ME-QANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIY 221
+E Q K+V GTP + APE L Y D++S G+ ++ P+ + R ++
Sbjct: 201 VEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMF 260
Query: 222 KKV 224
+++
Sbjct: 261 RRI 263
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 41 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 99 FNDVYLVTHLM--GADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GL + + T + APE+ +YN+ DI+S G
Sbjct: 155 NLAVNED-SELKILDFGLCRHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 48 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 106 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 161
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + T + APE+ +YN+ DI+S G
Sbjct: 162 NLAVNED-CELKILDFGLAR-HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 219
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 220 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 267
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 41 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 99 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 155 NLAVNED-CELKILDYGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 71 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 128
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + ++ G
Sbjct: 129 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCG 185
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 186 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 236
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 27 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 82
Query: 84 KTVNIITELFTSGSLRQYRXXXXXX--XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 83 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 138
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPE--LYDENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE L + Y+ DI+S
Sbjct: 139 QNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYYSTAVDIWS 196
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 197 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 256
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 257 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 41 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 99 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 155 NLAVNED-CELKILDAGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 20 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 75
Query: 84 KTVNIITELFTSGSLRQYRXXXXXX--XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 76 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 131
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPE--LYDENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE L + Y+ DI+S
Sbjct: 132 QNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYYSTAVDIWS 189
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 190 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 249
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 250 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 104/207 (50%), Gaps = 16/207 (7%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
++ L H ++ Y ++ DD+ + +G L +Y + +I+
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGCLLKYIRKIGSFDETCTRFYTAEIV 142
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPE 177
S L YLH IIHRDLK +NI +N + ++I D G A ++ +QA A S +GT +
Sbjct: 143 SALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVGTAQ 199
Query: 178 FMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSK 235
+++PEL E + ++ +D+++ G + ++V P+ N I++K+ IK +
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPE 255
Query: 236 VKDPEVKSFIEKCLV-PASQRLSAKEL 261
P+ + +EK LV A++RL +E+
Sbjct: 256 KFFPKARDLVEKLLVLDATKRLGCEEM 282
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 110/234 (47%), Gaps = 25/234 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL----RQYRXX 104
S EDL+R S H+LK H +I+ ++ D + ++ E L +
Sbjct: 69 STEDLKREASICHMLK---HPHIVELLETYSSD--GMLYMVFEFMDGADLCFEIVKRADA 123
Query: 105 XXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFING--NQGEVKIGDLGLAT 162
+ RQIL L Y HD IIHRD+K +N+ + N VK+GD G+A
Sbjct: 124 GFVYSEAVASHYMRQILEALRY--CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAI 181
Query: 163 IMEQAN--AKSVIGTPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQ 219
+ ++ A +GTP FMAPE+ E Y + D++ G+ + +++ P+ + +
Sbjct: 182 QLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--R 239
Query: 220 IYKKVSSG---IKPAALSKVKDPEVKSFIEKCLV--PASQRLSAKELLMDPFLQ 268
+++ + G + P S + + K + + L+ PA +R++ E L P+L+
Sbjct: 240 LFEGIIKGKYKMNPRQWSHISE-SAKDLVRRMLMLDPA-ERITVYEALNHPWLK 291
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 137
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + + G
Sbjct: 138 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRDDLCG 194
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 245
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + ++ G
Sbjct: 115 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCG 171
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + ++ G
Sbjct: 112 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCG 168
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 41 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 99 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 155 NLAVNED-CELKILDRGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 116
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + ++ G
Sbjct: 117 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCG 173
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 224
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 111/236 (47%), Gaps = 22/236 (9%)
Query: 49 SPEDLERLYS----EVHLLKSLK-HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX 103
SPE LE + E H+L+ + H +II +S+ + + + ++ +L G L Y
Sbjct: 135 SPEQLEEVREATRRETHILRQVAGHPHIITLIDSY--ESSSFMFLVFDLMRKGELFDYLT 192
Query: 104 XXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATI 163
R +L + +LH+++ I+HRDLK +NI ++ N ++++ D G +
Sbjct: 193 EKVALSEKETRSIMRSLLEAVSFLHANN--IVHRDLKPENILLDDNM-QIRLSDFGFSCH 249
Query: 164 MEQANA-KSVIGTPEFMAPELY----DEN---YNELADIYSFGMCMLEMVTFEYPYSECR 215
+E + + GTP ++APE+ DE Y + D+++ G+ + ++ P+ R
Sbjct: 250 LEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH-R 308
Query: 216 NSAQIYKKVSSGIKPAALSKVKD--PEVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
+ + + G + + D VK I + L V RL+A++ L PF +
Sbjct: 309 RQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G + +
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPRGEVYKELQKLSKFDEQRTA 116
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + ++ G
Sbjct: 117 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCG 173
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 224
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 127/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 22 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 77
Query: 84 KTVNIITELFTSGSLRQYRXXXXXX--XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 78 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 133
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPE--LYDENYNELADIYS 196
+N+ IN +G +K+ D GLA + + V+ T + APE L + Y+ DI+S
Sbjct: 134 ENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWS 191
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 192 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 251
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 252 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD G VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 41 AFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 99 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + A + T + APE+ +YN+ DI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDDEMA-GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 22 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 77
Query: 84 KTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F S L+ + + Q+L GL + HSH ++HRDLK
Sbjct: 78 KLYLVFE--FLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 133
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPE--LYDENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE L + Y+ DI+S
Sbjct: 134 QNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWS 191
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 192 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 251
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 252 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD G VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 41 AFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 99 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + A + T + APE+ +YN+ DI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDDEMA-GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + ++ G
Sbjct: 115 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRAALCG 171
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 36/188 (19%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT-----------VNIITELFTSGSLRQY- 101
E++ EV L L+H I+R++N+W++ +N T + I +L +L+ +
Sbjct: 48 EKVMREVKALAKLEHPGIVRYFNAWLE-KNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM 106
Query: 102 --RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLG 159
R QI + +LHS ++HRDLK NIF + VK+GD G
Sbjct: 107 NGRCTIEERERSVCLHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDV-VKVGDFG 163
Query: 160 LATIMEQ--------------ANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEM 204
L T M+Q A +GT +M+PE ++ +Y+ DI+S G+ + E+
Sbjct: 164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
Query: 205 VTFEYPYS 212
+ YP+S
Sbjct: 224 L---YPFS 228
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 23 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 78
Query: 84 KTVNIITELFTSGSLRQYRXXXXXX--XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F S L+ + + Q+L GL + HSH ++HRDLK
Sbjct: 79 KLYLVFE--FLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 134
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD--ENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE+ + Y+ DI+S
Sbjct: 135 QNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWS 192
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 193 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 252
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 253 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 127/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 21 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 76
Query: 84 KTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 77 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 132
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPE--LYDENYNELADIYS 196
+N+ IN +G +K+ D GLA + + V+ T + APE L + Y+ DI+S
Sbjct: 133 ENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWS 190
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 191 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 250
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 251 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 18/219 (8%)
Query: 42 RIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYN----SWIDDQNKTVNIITELFTSGS 97
+I + + +R E+ +LK KH+NII + + + K+V ++ +L S
Sbjct: 87 KIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-D 145
Query: 98 LRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 157
L Q + Q+L GL Y+HS +IHRDLK N+ +N N E+KIGD
Sbjct: 146 LHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNEN-CELKIGD 202
Query: 158 LGLATIMEQANAK------SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMVTFE- 208
G+A + + A+ + T + APEL Y + D++S G EM+
Sbjct: 203 FGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
Query: 209 -YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
+P + Q+ V PA + V V+++I+
Sbjct: 263 LFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQ 301
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 112
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + ++ G
Sbjct: 113 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRDTLCG 169
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 220
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 14/180 (7%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW 116
E ++ H+NIIR + + K + IITE +G+L ++ R G
Sbjct: 95 GEAGIMGQFSHHNIIRLEG--VISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGM 152
Query: 117 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME---QANAKSVI 173
R I +G+ YL + + +HRDL NI +N N K+ D GL+ ++E +A +
Sbjct: 153 LRGIAAGMKYLANMN--YVHRDLAARNILVNSNL-VCKVSDFGLSRVLEDDPEATYTTSG 209
Query: 174 GT--PEFMAPELYD-ENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
G + APE + +D++SFG+ M E++T+ E PY E N ++ K ++ G +
Sbjct: 210 GKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-EVMKAINDGFR 268
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 17/218 (7%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSW-----IDDQNKTVNIITELFTSGSLRQY 101
QS R Y E+ LLK LKH N+I + + I+D ++ V ++T L G+
Sbjct: 65 FQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSE-VYLVTTLM--GADLNN 121
Query: 102 RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA 161
Q+L GL Y+HS IIHRDLK N+ +N + E++I D GLA
Sbjct: 122 IVKSQALSDEHVQFLVYQLLRGLKYIHSAG--IIHRDLKPSNVAVNED-SELRILDFGLA 178
Query: 162 TIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNS 217
++ + T + APE+ +YN+ DI+S G M E++ + +P S+ +
Sbjct: 179 RQADE-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQ 237
Query: 218 AQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVPASQR 255
+ +V P L+K+ +++I+ L P Q+
Sbjct: 238 LKRIMEVVGTPSPEVLAKISSEHARTYIQ-SLPPMPQK 274
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD G VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 37 AFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 94
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 95 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 150
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + A + T + APE+ +YN+ DI+S G
Sbjct: 151 NLAVNED-CELKILDFGLARHTDDEMA-GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 208
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 209 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 256
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 53 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 110
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + ++ G
Sbjct: 111 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCG 167
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 168 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 218
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + ++ G
Sbjct: 112 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRAALCG 168
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 20 YKARNKLTGEVVALXKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 75
Query: 84 KTVNIITELFTSGSLRQYRXXXXXX--XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 76 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 131
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD--ENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE+ + Y+ DI+S
Sbjct: 132 QNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWS 189
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 190 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 249
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 250 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 19 YKARNKLTGEVVALXKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 74
Query: 84 KTVNIITELFTSGSLRQYRXXXXXX--XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 75 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 130
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD--ENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE+ + Y+ DI+S
Sbjct: 131 QNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWS 188
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 189 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 248
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 249 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 41 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 99 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 155 NLAVNED-CELKILDGGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 115
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + ++ G
Sbjct: 116 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCG 172
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 223
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
E + EV ++ +L H NI++ Y + ++ E G L Y
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGL----MHNPPRMVMEFVPCGDL--YHRLLDKAHP 118
Query: 111 XXXXGWARQILS---GLIYLHSHDPPIIHRDLKCDNIFINGNQGE----VKIGDLGLATI 163
R +L G+ Y+ + +PPI+HRDL+ NIF+ K+ D GL+
Sbjct: 119 IKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS-- 176
Query: 164 MEQANAKSV---IGTPEFMAPELY---DENYNELADIYSFGMCMLEMVTFEYPYSECRNS 217
Q + SV +G ++MAPE +E+Y E AD YSF M + ++T E P+ E
Sbjct: 177 --QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
Query: 218 AQIYKKV--SSGIKPAALSKVKDPEVKSFIEKC 248
+ + G++P + + P +++ IE C
Sbjct: 235 KIKFINMIREEGLRP-TIPEDCPPRLRNVIELC 266
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 134/298 (44%), Gaps = 51/298 (17%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 24 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 79
Query: 84 KTVNIITELFTSGSLRQYRXXXXXX--XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 80 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 135
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD--ENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE+ + Y+ DI+S
Sbjct: 136 QNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWS 193
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 194 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 253
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPR 287
SKV P + +S + + L ++R+SAK L PF Q TK P+P + L R
Sbjct: 254 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ--DVTK----PVPHLRLER 305
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 27 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 82
Query: 84 KTVNIITELFTSGSLRQYRXXXXXX--XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 83 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 138
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPE--LYDENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE L + Y+ DI+S
Sbjct: 139 QNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWS 196
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 197 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 256
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 257 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 21 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 76
Query: 84 KTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 77 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 132
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPE--LYDENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE L + Y+ DI+S
Sbjct: 133 QNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWS 190
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 191 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 250
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 251 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 20 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 75
Query: 84 KTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 76 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 131
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPE--LYDENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE L + Y+ DI+S
Sbjct: 132 QNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWS 189
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 190 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 249
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 250 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + + G
Sbjct: 112 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTELCG 168
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + ++ G
Sbjct: 115 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCG 171
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 10/220 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 116
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + ++ G
Sbjct: 117 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCG 173
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAAL 233
T +++ PE + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 174 TLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR--VEFTF 230
Query: 234 SKVKDPEVKSFIEKCLVP-ASQRLSAKELLMDPFLQVNGT 272
+ I + L SQR +E+L P++ N +
Sbjct: 231 PDFVTEGARDLISRLLKHNPSQRPXLREVLEHPWITANSS 270
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 19 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 74
Query: 84 KTVNIITELFTSGSLRQYRXXXXXX--XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 75 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 130
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD--ENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE+ + Y+ DI+S
Sbjct: 131 QNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWS 188
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 189 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 248
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 249 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDSTR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + ++ G
Sbjct: 112 TYITELANALSYCHSKK--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRAALCG 168
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E YK++S
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQDTYKRIS 219
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 20 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 75
Query: 84 KTVNIITELFTSGSLRQYRXXXXXX--XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 76 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 131
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD--ENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE+ + Y+ DI+S
Sbjct: 132 QNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWS 189
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 190 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 249
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 250 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 19 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 74
Query: 84 KTVNIITELFTSGSLRQYRXXXXXX--XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 75 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 130
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD--ENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE+ + Y+ DI+S
Sbjct: 131 QNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWS 188
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 189 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 248
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 249 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 22 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 77
Query: 84 KTVNIITELFTSGSLRQYRXXXXXX--XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 78 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 133
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPE--LYDENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE L + Y+ DI+S
Sbjct: 134 QNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWS 191
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 192 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 251
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 252 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 41 VRIDDVLQSPEDLERLYS-EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR 99
V + + S D +R + E+ +LK+L + I+++ +++ ++ E SG LR
Sbjct: 42 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 101
Query: 100 QY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
+ + ++ QI G+ YL S +HRDL NI + ++ VKI D
Sbjct: 102 DFLQRHRARLDASRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVE-SEAHVKIADF 158
Query: 159 GLATIMEQANAKSVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYS 212
GLA ++ V+ P + APE L D ++ +D++SFG+ + E+ F Y
Sbjct: 159 GLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL--FTYCDK 216
Query: 213 ECRNSAQIYKKVSSGIKPAALSK 235
C SA+ + + S ALS+
Sbjct: 217 SCSPSAEFLRMMGSERDVPALSR 239
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 113
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + + G
Sbjct: 114 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRXXLCG 170
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 221
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 17/218 (7%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSW-----IDDQNKTVNIITELFTSGSLRQY 101
QS R Y E+ LLK LKH N+I + + I+D ++ V ++T L G+
Sbjct: 65 FQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSE-VYLVTTLM--GADLNN 121
Query: 102 RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA 161
Q+L GL Y+HS IIHRDLK N+ +N + E++I D GLA
Sbjct: 122 IVKCQALSDEHVQFLVYQLLRGLKYIHSAG--IIHRDLKPSNVAVNED-SELRILDFGLA 178
Query: 162 TIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNS 217
++ + T + APE+ +YN+ DI+S G M E++ + +P S+ +
Sbjct: 179 RQADE-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQ 237
Query: 218 AQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVPASQR 255
+ +V P L+K+ +++I+ L P Q+
Sbjct: 238 LKRIMEVVGTPSPEVLAKISSEHARTYIQ-SLPPMPQK 274
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G + +
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPRGEVYKELQKLSKFDEQRTA 116
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + + G
Sbjct: 117 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRXXLXG 173
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 224
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 23 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 78
Query: 84 KTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 79 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 134
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPE--LYDENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE L + Y+ DI+S
Sbjct: 135 QNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWS 192
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 193 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 252
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 253 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 112
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + ++ G
Sbjct: 113 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSCHAPSSRRTTLSG 169
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 220
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 23 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 78
Query: 84 KTVNIITELFTSGSLRQYRXXXXXX--XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 79 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 134
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPE--LYDENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE L + Y+ DI+S
Sbjct: 135 QNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWS 192
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 193 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 252
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 253 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 22 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 77
Query: 84 KTVNIITELFTSGSLRQYRXXXXXX--XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 78 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 133
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPE--LYDENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE L + Y+ DI+S
Sbjct: 134 QNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWS 191
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 192 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 251
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 252 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 18/219 (8%)
Query: 42 RIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYN----SWIDDQNKTVNIITELFTSGS 97
+I + + +R E+ +LK KH+NII + + + K+V ++ +L S
Sbjct: 86 KIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-D 144
Query: 98 LRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 157
L Q + Q+L GL Y+HS +IHRDLK N+ +N N E+KIGD
Sbjct: 145 LHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNEN-CELKIGD 201
Query: 158 LGLATIM------EQANAKSVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMVTFE- 208
G+A + Q + T + APEL Y + D++S G EM+
Sbjct: 202 FGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
Query: 209 -YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
+P + Q+ V PA + V V+++I+
Sbjct: 262 LFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQ 300
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 21 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 76
Query: 84 KTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 77 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 132
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPE--LYDENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE L + Y+ DI+S
Sbjct: 133 QNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWS 190
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 191 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 250
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 251 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 112
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + + G
Sbjct: 113 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTDLCG 169
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 220
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 103/207 (49%), Gaps = 16/207 (7%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
++ L H ++ Y ++ DD+ + +G L +Y + +I+
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIV 143
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPE 177
S L YLH IIHRDLK +NI +N + ++I D G A ++ +QA A S +GT +
Sbjct: 144 SALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVGTAQ 200
Query: 178 FMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSK 235
+++PEL E + + +D+++ G + ++V P+ N I++K+ IK +
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPE 256
Query: 236 VKDPEVKSFIEKCLV-PASQRLSAKEL 261
P+ + +EK LV A++RL +E+
Sbjct: 257 KFFPKARDLVEKLLVLDATKRLGCEEM 283
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 24 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 79
Query: 84 KTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 80 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 135
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPE--LYDENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE L + Y+ DI+S
Sbjct: 136 QNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWS 193
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 194 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 253
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 254 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 20 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 75
Query: 84 KTVNIITELFTSGSLRQYRXXXXXX--XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 76 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 131
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD--ENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE+ + Y+ DI+S
Sbjct: 132 QNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWS 189
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 190 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 249
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 250 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 20 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 75
Query: 84 KTVNIITELFTSGSLRQYRXXXXXX--XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 76 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 131
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD--ENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE+ + Y+ DI+S
Sbjct: 132 QNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWS 189
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 190 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 249
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 250 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 12/206 (5%)
Query: 64 KSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSG 123
+SL+H NI+RF + + + I+ E + G L + + +Q++SG
Sbjct: 70 RSLRHPNIVRFKEVILTPTH--LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 124 LIYLHSHDPPIIHRDLKCDNIFINGNQG-EVKIGDLGLA-TIMEQANAKSVIGTPEFMAP 181
+ Y H+ + HRDLK +N ++G+ +KI G + + + + KS +GTP ++AP
Sbjct: 128 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAP 185
Query: 182 E--LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS--GIKPAALSKVK 237
E L E ++AD++S G+ + M+ YP+ + K + ++ A V
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVH 245
Query: 238 -DPEVKSFIEKCLVP-ASQRLSAKEL 261
PE + I + V ++R+S E+
Sbjct: 246 ISPECRHLISRIFVADPAKRISIPEI 271
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 51 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 108
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + ++ G
Sbjct: 109 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCG 165
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 166 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 216
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 20 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 75
Query: 84 KTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 76 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 131
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPE--LYDENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE L + Y+ DI+S
Sbjct: 132 QNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWS 189
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 190 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 249
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 250 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 116
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + + G
Sbjct: 117 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTDLCG 173
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 224
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 21 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 76
Query: 84 KTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 77 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 132
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPE--LYDENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE L + Y+ DI+S
Sbjct: 133 QNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWS 190
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 191 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 250
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 251 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 20 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 75
Query: 84 KTVNIITELFTSGSLRQYRXXXXXX--XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 76 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 131
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD--ENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE+ + Y+ DI+S
Sbjct: 132 QNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWS 189
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 190 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 249
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 250 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 19 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 74
Query: 84 KTVNIITELFTSGSLRQYRXXXXXX--XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 75 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 130
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPE--LYDENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE L + Y+ DI+S
Sbjct: 131 QNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWS 188
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 189 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 248
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 249 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + + G
Sbjct: 112 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTDLCG 168
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 12/219 (5%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L E+ + L+H NI+R YN + D K + ++ E G L +
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHD--RKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 117
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ L Y H +IHRD+K +N+ + G +GE+KI D G + + + G
Sbjct: 118 TFMEELADALHYCHERK--VIHRDIKPENLLM-GYKGELKIADFGWSVHAPSLRRRXMCG 174
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK-PAA 232
T +++ PE+ + + ++E D++ G+ E + P+ ++ + V+ +K P
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF 234
Query: 233 LSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVN 270
LS K I K L QRL K ++ P+++ N
Sbjct: 235 LSDGS----KDLISKLLRYHPPQRLPLKGVMEHPWVKAN 269
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 12/219 (5%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L E+ + L+H NI+R YN + D K + ++ E G L +
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHD--RKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 117
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ L Y H +IHRD+K +N+ + G +GE+KI D G + + + G
Sbjct: 118 TFMEELADALHYCHERK--VIHRDIKPENLLM-GYKGELKIADFGWSVHAPSLRRRXMCG 174
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK-PAA 232
T +++ PE+ + + ++E D++ G+ E + P+ ++ + V+ +K P
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF 234
Query: 233 LSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVN 270
LS K I K L QRL K ++ P+++ N
Sbjct: 235 LSDGS----KDLISKLLRYHPPQRLPLKGVMEHPWVKAN 269
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 12/219 (5%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L E+ + L+H NI+R YN + D K + ++ E G L +
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNYFHD--RKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 118
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ L Y H +IHRD+K +N+ + G +GE+KI D G + + + G
Sbjct: 119 TFMEELADALHYCHERK--VIHRDIKPENLLM-GYKGELKIADFGWSVHAPSLRRRXMCG 175
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK-PAA 232
T +++ PE+ + + ++E D++ G+ E + P+ ++ + V+ +K P
Sbjct: 176 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF 235
Query: 233 LSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVN 270
LS K I K L QRL K ++ P+++ N
Sbjct: 236 LSDGS----KDLISKLLRYHPPQRLPLKGVMEHPWVKAN 270
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + + G
Sbjct: 112 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTDLCG 168
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 20 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 75
Query: 84 KTVNIITELFTSGSLRQYRXXXXXX--XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+ + + Q+L GL + HSH ++HRDLK
Sbjct: 76 KLYLVFE--FLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 131
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD--ENYNELADIYS 196
+N+ IN +G +K+ D GLA + + V+ T + APE+ + Y+ DI+S
Sbjct: 132 ENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWS 189
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 190 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 249
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 250 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD G VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 61 AFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 118
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 119 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 174
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 175 NLAVNED-CELKILDFGLARHTDD-EMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 232
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 233 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 280
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + + G
Sbjct: 112 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRXXLCG 168
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 122/277 (44%), Gaps = 41/277 (14%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 23 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 78
Query: 84 KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDN 143
K + L + Q+L GL + HSH ++HRDLK N
Sbjct: 79 KLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQN 136
Query: 144 IFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPE--LYDENYNELADIYSFG 198
+ IN +G +K+ D GLA + + V+ T + APE L + Y+ DI+S G
Sbjct: 137 LLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLG 194
Query: 199 MCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------LSK 235
EMVT + SE +I++ + + G+ KP+ SK
Sbjct: 195 CIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSK 254
Query: 236 VKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
V P + +S + + L ++R+SAK L PF Q
Sbjct: 255 VVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + + G
Sbjct: 112 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTXLCG 168
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD G VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 61 AFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 118
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 119 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 174
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 175 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 232
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 233 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 280
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 20 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 75
Query: 84 KTVNIITELFTSGSLRQYRXXXXXX--XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 76 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHR--VLHRDLKP 131
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD--ENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE+ + Y+ DI+S
Sbjct: 132 QNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWS 189
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 190 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 249
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 250 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + + G
Sbjct: 115 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRDDLCG 171
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 19 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 74
Query: 84 KTVNIITELFTSGSLRQYRXXXXXX--XXXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + F L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 75 KLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 130
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD--ENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE+ + Y+ DI+S
Sbjct: 131 QNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWS 188
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 189 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 248
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 249 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD G VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 47 AFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 104
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 105 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 160
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 161 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 219 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 266
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI D G + + + G
Sbjct: 115 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRXXLCG 171
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD GL VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 41 AFDTKTGLRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 99 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI GLA + + T + APE+ +YN+ DI+S G
Sbjct: 155 NLAVNED-CELKILGFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 17/218 (7%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSW-----IDDQNKTVNIITELFTSGSLRQY 101
QS R Y E+ LLK LKH N+I + + I+D ++ V ++T L G+
Sbjct: 57 FQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSE-VYLVTTLM--GADLNN 113
Query: 102 RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA 161
Q+L GL Y+HS IIHRDLK N+ +N + E++I D GLA
Sbjct: 114 IVKCQALSDEHVQFLVYQLLRGLKYIHSAG--IIHRDLKPSNVAVNED-CELRILDFGLA 170
Query: 162 TIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMCMLEMVTFE--YPYSECRNS 217
++ + T + APE+ +YN+ DI+S G M E++ + +P S+ +
Sbjct: 171 RQADE-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQ 229
Query: 218 AQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVPASQR 255
+ +V P L+K+ +++I+ L P Q+
Sbjct: 230 LKRIMEVVGTPSPEVLAKISSEHARTYIQS-LPPMPQK 266
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD G VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 60 AFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 117
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 118 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 173
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 174 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 231
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 232 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 279
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD G VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 41 AFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 99 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 155 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD G VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 37 AFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 94
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 95 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 150
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 151 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 208
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 209 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 256
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 16/228 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD G VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 51 AFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 108
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 109 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 164
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 165 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 222
Query: 201 MLEMVTFE--YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIE 246
M E++T +P ++ + ++ ++ L K+ +++I+
Sbjct: 223 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 270
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 122/277 (44%), Gaps = 41/277 (14%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 19 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 74
Query: 84 KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDN 143
K + + + Q+L GL + HSH ++HRDLK N
Sbjct: 75 KLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQN 132
Query: 144 IFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPELYD--ENYNELADIYSFG 198
+ IN +G +K+ D GLA + + V+ T + APE+ + Y+ DI+S G
Sbjct: 133 LLIN-TEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 199 MCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------LSK 235
EMVT + SE +I++ + + G+ KP+ SK
Sbjct: 191 CIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSK 250
Query: 236 VKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
V P + +S + + L ++R+SAK L PF Q
Sbjct: 251 VVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 87/186 (46%), Gaps = 14/186 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD G VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 37 AFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 94
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 95 FNDVYLVTHLM--GADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 150
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D GLA + + T + APE+ +YN+ DI+S G
Sbjct: 151 NLAVNED-CELKILDFGLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 208
Query: 201 MLEMVT 206
M E++T
Sbjct: 209 MAELLT 214
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 113
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI + G + + ++ G
Sbjct: 114 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIANFGWSVHAPSSRRTTLCG 170
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 221
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 21/228 (9%)
Query: 68 HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYL 127
H +IR + W + Q + ++ + L Y + Q+++ + +
Sbjct: 97 HPGVIRLLD-WFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHC 155
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDEN 187
HS ++HRD+K +NI I+ +G K+ D G ++ GT + PE +
Sbjct: 156 HSRG--VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRH 213
Query: 188 -YNEL-ADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFI 245
Y+ L A ++S G+ + +MV + P+ R+ + ++ PA +S P+ + I
Sbjct: 214 QYHALPATVWSLGILLYDMVCGDIPFE--RDQEILEAELHF---PAHVS----PDCCALI 264
Query: 246 EKCLVP-ASQRLSAKELLMDPFLQVNG------TTKNRPLPLPDIVLP 286
+CL P S R S +E+L+DP++Q +K P PL +LP
Sbjct: 265 RRCLAPKPSSRPSLEEILLDPWMQTPAEDVPLNPSKGGPAPLAWSLLP 312
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 90/194 (46%), Gaps = 21/194 (10%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW 116
E ++ H NIIR + ++K V I+TE +GSL + R G
Sbjct: 95 GEASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 117 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIG 174
R I SG+ YL D +HRDL NI IN N K+ D GLA ++E A + G
Sbjct: 153 LRGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLARVLEDDPEAAYTTRG 209
Query: 175 TP---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ +PE + + +D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYR 268
Query: 230 -------PAALSKV 236
PAAL ++
Sbjct: 269 LPPPMDCPAALYQL 282
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 21/220 (9%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
LL+ +H NII + + D K V ++TEL G L I
Sbjct: 69 LLRYGQHPNIITLKDVY--DDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTIT 126
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANAKSVIGTP-- 176
+ YLH+ ++HRDLK NI +GN ++I D G A + N ++ TP
Sbjct: 127 KTVEYLHAQG--VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG--LLMTPCY 182
Query: 177 --EFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSA--QIYKKVSSG---I 228
F+APE+ + + Y+ DI+S G+ + M+T P++ + +I ++ SG +
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSL 242
Query: 229 KPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFL 267
+ V D K + K L V QRL+A +L P++
Sbjct: 243 SGGYWNSVSD-TAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
++ L H ++ Y ++ DD+ + +G L +Y + +I+
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPE 177
S L YLH IIHRDLK +NI +N + ++I D G A ++ +QA A +GT +
Sbjct: 143 SALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 178 FMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSK 235
+++PEL E + + +D+++ G + ++V P+ N I+ K+ IK +
Sbjct: 200 YVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF-RAGNEGLIFAKI---IKLEYDFPE 255
Query: 236 VKDPEVKSFIEKCLV-PASQRLSAKEL 261
P+ + +EK LV A++RL +E+
Sbjct: 256 KFFPKARDLVEKLLVLDATKRLGCEEM 282
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 74/137 (54%), Gaps = 9/137 (6%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVI 173
+A +I+S L++LH D II+RDLK DN+ ++ ++G K+ D G+ I +
Sbjct: 129 YAAEIISALMFLH--DKGIIYRDLKLDNVLLD-HEGHCKLADFGMCKEGICNGVTTATFC 185
Query: 174 GTPEFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG--IKP 230
GTP+++APE+ E Y D ++ G+ + EM+ P+ E N +++ + + + P
Sbjct: 186 GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPF-EAENEDDLFEAILNDEVVYP 244
Query: 231 AALSKVKDPEVKSFIEK 247
L + +KSF+ K
Sbjct: 245 TWLHEDATGILKSFMTK 261
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 109/224 (48%), Gaps = 12/224 (5%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL-RQYRXXXXXXX 109
+D E + +E+ ++ L H N+I+ Y+++ + +N V ++ E G L +
Sbjct: 128 KDKEEVKNEISVMNQLDHANLIQLYDAF-ESKNDIV-LVMEYVDGGELFDRIIDESYNLT 185
Query: 110 XXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIF-INGNQGEVKIGDLGLATIME-QA 167
+ +QI G+ H H I+H DLK +NI +N + ++KI D GLA + +
Sbjct: 186 ELDTILFMKQICEGI--RHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243
Query: 168 NAKSVIGTPEFMAPELYDENYNEL-ADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS 226
K GTPEF+APE+ + ++ D++S G+ +++ P+ N A+ + +
Sbjct: 244 KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFL-GDNDAETLNNILA 302
Query: 227 GIKPAALSKVKD--PEVKSFIEKCLVP-ASQRLSAKELLMDPFL 267
+ +D E K FI K L+ S R+SA E L P+L
Sbjct: 303 CRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWL 346
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 103/207 (49%), Gaps = 16/207 (7%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
++ L H ++ Y ++ DD+ + +G L +Y + +I+
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPE 177
S L YLH IIHRDLK +NI +N + ++I D G A ++ +QA A + +GT +
Sbjct: 141 SALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANAFVGTAQ 197
Query: 178 FMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSK 235
+++PEL E + + +D+++ G + ++V P+ N I++K+ IK +
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPE 253
Query: 236 VKDPEVKSFIEKCLV-PASQRLSAKEL 261
P+ + +EK LV A++RL +E+
Sbjct: 254 KFFPKARDLVEKLLVLDATKRLGCEEM 280
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 51 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 101
EDL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 82 EDLSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 102 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Q+ G+ YL S IHRDL N+ + N +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VM 196
Query: 154 KIGDLGLATIMEQAN--AKSVIG--TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 207
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 208 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 263
YP ++ K+ KPA + E+ + C VP SQR + K+L+
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 311
Query: 264 D 264
D
Sbjct: 312 D 312
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
++ L H ++ Y ++ DD+ + +G L +Y + +I+
Sbjct: 82 VMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIV 139
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPE 177
S L YLH IIHRDLK +NI +N + ++I D G A ++ +QA A S +GT +
Sbjct: 140 SALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVGTAQ 196
Query: 178 FMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSK 235
+++PEL E + + +D+++ G C++ + P N I++K+ IK +
Sbjct: 197 YVSPELLTEKSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI---IKLEYDFPE 252
Query: 236 VKDPEVKSFIEKCLV-PASQRLSAKEL 261
P+ + +EK LV A++RL +E+
Sbjct: 253 KFFPKARDLVEKLLVLDATKRLGCEEM 279
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXX 114
+L EV + L+H NI+R Y + D V +I E G++ +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIG 174
+ ++ + L Y HS +IHRD+K +N+ + G+ GE+KI + G + + ++ G
Sbjct: 115 TYITELANALSYCHSKR--VIHRDIKPENLLL-GSAGELKIANFGWSVHAPSSRRTTLCG 171
Query: 175 TPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVS 225
T +++ PE+ + ++E D++S G+ E + + P+ E + YK++S
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
++ L H ++ Y ++ DD+ + +G L +Y + +I+
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPE 177
S L YLH IIHRDLK +NI +N + ++I D G A ++ +QA A +GT +
Sbjct: 143 SALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 178 FMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSK 235
+++PEL E + + +D+++ G + ++V P+ N I+ K+ IK +
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEGLIFAKI---IKLEYDFPE 255
Query: 236 VKDPEVKSFIEKCLV-PASQRLSAKEL 261
P+ + +EK LV A++RL +E+
Sbjct: 256 KFFPKARDLVEKLLVLDATKRLGCEEM 282
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
++ L H ++ Y ++ DD+ + +G L +Y + +I+
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPE 177
S L YLH IIHRDLK +NI +N + ++I D G A ++ +QA A +GT +
Sbjct: 143 SALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 178 FMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSK 235
+++PEL E + + +D+++ G + ++V P+ N I++K+ IK +
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPE 255
Query: 236 VKDPEVKSFIEKCLV-PASQRLSAKEL 261
P+ + +EK LV A++RL +E+
Sbjct: 256 KFFPKARDLVEKLLVLDATKRLGCEEM 282
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 26/213 (12%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
E + EV ++ +L H NI++ Y + ++ E G L Y
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGL----MHNPPRMVMEFVPCGDL--YHRLLDKAHP 118
Query: 111 XXXXGWARQILS---GLIYLHSHDPPIIHRDLKCDNIFINGNQGE----VKIGDLGLATI 163
R +L G+ Y+ + +PPI+HRDL+ NIF+ K+ D G +
Sbjct: 119 IKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS-- 176
Query: 164 MEQANAKSV---IGTPEFMAPELY---DENYNELADIYSFGMCMLEMVTFEYPYSECRNS 217
Q + SV +G ++MAPE +E+Y E AD YSF M + ++T E P+ E
Sbjct: 177 --QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
Query: 218 AQIYKKV--SSGIKPAALSKVKDPEVKSFIEKC 248
+ + G++P + + P +++ IE C
Sbjct: 235 KIKFINMIREEGLRP-TIPEDCPPRLRNVIELC 266
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
++ L H ++ Y ++ DD+ + +G L +Y + +I+
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIV 143
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPE 177
S L YLH IIHRDLK +NI +N + ++I D G A ++ +QA A +GT +
Sbjct: 144 SALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQ 200
Query: 178 FMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSK 235
+++PEL E + + +D+++ G + ++V P+ N I++K+ IK +
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPE 256
Query: 236 VKDPEVKSFIEKCLV-PASQRLSAKEL 261
P+ + +EK LV A++RL +E+
Sbjct: 257 KFFPKARDLVEKLLVLDATKRLGCEEM 283
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
++ L H ++ Y ++ DD+ + +G L +Y + +I+
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPE 177
S L YLH IIHRDLK +NI +N + ++I D G A ++ +QA A +GT +
Sbjct: 143 SALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 178 FMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSK 235
+++PEL E + + +D+++ G + ++V P+ N I++K+ IK +
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPE 255
Query: 236 VKDPEVKSFIEKCLV-PASQRLSAKEL 261
P+ + +EK LV A++RL +E+
Sbjct: 256 KFFPKARDLVEKLLVLDATKRLGCEEM 282
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 117
E ++ H NIIR + ++K V I+TE +GSL + R G
Sbjct: 96 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGT 175
R I SG+ YL D +HRDL NI IN N K+ D GL+ ++E A + G
Sbjct: 154 RGIASGMKYLS--DMGFVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 176 P---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK- 229
+ +PE + + +D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRL 269
Query: 230 ------PAALSKV 236
PAAL ++
Sbjct: 270 PPPMDCPAALYQL 282
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 9/161 (5%)
Query: 117 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV---- 172
A I+ L +LHS +IHRD+K N+ IN G+VK D G++ + AK +
Sbjct: 142 AVSIVKALEHLHSK-LSVIHRDVKPSNVLINA-LGQVKXCDFGISGYLVDDVAKDIDAGC 199
Query: 173 --IGTPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKP 230
PE + PEL + Y+ +DI+S G+ +E+ +PY Q K+V P
Sbjct: 200 KPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSP 259
Query: 231 AALSKVKDPEVKSFIEKCLVPAS-QRLSAKELLMDPFLQVN 270
+ E F +CL S +R + EL PF ++
Sbjct: 260 QLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFFTLH 300
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA +++ G VA ++R+D + P R E+ LLK L H NI++ + I +N
Sbjct: 23 YKARNKLTGEVVALKKIRLDTETEGVPSTAIR---EISLLKELNHPNIVKLLDV-IHTEN 78
Query: 84 KTVNIITELFTSGSLRQYRXXXXXXX--XXXXXGWARQILSGLIYLHSHDPPIIHRDLKC 141
K + + L+++ + Q+L GL + HSH ++HRDLK
Sbjct: 79 KLYLVFEHV--DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 134
Query: 142 DNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGTPEFMAPE--LYDENYNELADIYS 196
N+ IN +G +K+ D GLA + + V+ T + APE L + Y+ DI+S
Sbjct: 135 QNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWS 192
Query: 197 FGMCMLEMVTFEYPY---SECRNSAQIYKKVSS-------GI------KPAA-------L 233
G EMVT + SE +I++ + + G+ KP+
Sbjct: 193 LGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF 252
Query: 234 SKVKDP---EVKSFIEKCL-VPASQRLSAKELLMDPFLQ 268
SKV P + +S + + L ++R+SAK L PF Q
Sbjct: 253 SKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 98/206 (47%), Gaps = 12/206 (5%)
Query: 64 KSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSG 123
+SL+H NI+RF + + + I+ E + G L + + +Q++SG
Sbjct: 70 RSLRHPNIVRFKEVILTPTH--LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 124 LIYLHSHDPPIIHRDLKCDNIFINGNQG-EVKIGDLGLA-TIMEQANAKSVIGTPEFMAP 181
+ Y H+ + HRDLK +N ++G+ +KI G + + + + K +GTP ++AP
Sbjct: 128 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAP 185
Query: 182 E--LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS--GIKPAALSKVK 237
E L E ++AD++S G+ + M+ YP+ + K + ++ A V
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVH 245
Query: 238 -DPEVKSFIEKCLVP-ASQRLSAKEL 261
PE + I + V ++R+S E+
Sbjct: 246 ISPECRHLISRIFVADPAKRISIPEI 271
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
++ L H ++ Y ++ DD+ + +G L +Y + +I+
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPE 177
S L YLH IIHRDLK +NI +N + ++I D G A ++ +QA A +GT +
Sbjct: 141 SALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 178 FMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSK 235
+++PEL E + + +D+++ G + ++V P+ N I++K+ IK +
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPE 253
Query: 236 VKDPEVKSFIEKCLV-PASQRLSAKEL 261
P+ + +EK LV A++RL +E+
Sbjct: 254 KFFPKARDLVEKLLVLDATKRLGCEEM 280
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 119/270 (44%), Gaps = 49/270 (18%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTS--------GSL 98
QS +R Y E+ LLK ++H N+I + + D+ T++ T+ + G L
Sbjct: 62 FQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDE--TLDDFTDFYLVMPFMGTDLGKL 119
Query: 99 RQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
++ Q+L GL Y+H+ IIHRDLK N+ +N + E+KI D
Sbjct: 120 MKHEKLGEDRIQFL----VYQMLKGLRYIHAAG--IIHRDLKPGNLAVNED-CELKILDF 172
Query: 159 GLATIMEQANAKSVIGTPEFMAPE--LYDENYNELADIYSFGMCMLEMVTFEYPYSECRN 216
GLA + V+ T + APE L Y + DI+S G M EM+T + + +
Sbjct: 173 GLARQADSEMXGXVV-TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH 231
Query: 217 SAQIYKKVS-SGIKPAA-LSKVKDPEVKSF--------------------------IEKC 248
Q+ + + +G PA + +++ E K++ +EK
Sbjct: 232 LDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKM 291
Query: 249 LV-PASQRLSAKELLMDPFLQVNGTTKNRP 277
LV A QR++A E L P+ + T++ P
Sbjct: 292 LVLDAEQRVTAGEALAHPYFESLHDTEDEP 321
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
++ L H ++ Y ++ DD+ + +G L +Y + +I+
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPE 177
S L YLH IIHRDLK +NI +N + ++I D G A ++ +QA A +GT +
Sbjct: 141 SALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 178 FMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSK 235
+++PEL E + + +D+++ G + ++V P+ N I++K+ IK +
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPE 253
Query: 236 VKDPEVKSFIEKCLV-PASQRLSAKEL 261
P+ + +EK LV A++RL +E+
Sbjct: 254 KFFPKARDLVEKLLVLDATKRLGCEEM 280
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 41 VRIDDVLQSPEDLERLYS-EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR 99
V + + S D +R + E+ +LK+L + I+++ +++ ++ E SG LR
Sbjct: 55 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 114
Query: 100 QY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
+ + ++ QI G+ YL S +HRDL NI + ++ VKI D
Sbjct: 115 DFLQRHRARLDASRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVE-SEAHVKIADF 171
Query: 159 GLATIMEQANAKSVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYS 212
GLA ++ V+ P + APE L D ++ +D++SFG+ + E+ F Y
Sbjct: 172 GLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL--FTYCDK 229
Query: 213 ECRNSAQIYKKVSSGIKPAALSK 235
C SA+ + + ALS+
Sbjct: 230 SCSPSAEFLRMMGCERDVPALSR 252
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA--TIMEQANAKSVI 173
+A +I GL +L S II+RDLK DN+ ++ ++G +KI D G+ I + K
Sbjct: 447 YAAEIAIGLFFLQSKG--IIYRDLKLDNVMLD-SEGHIKIADFGMCKENIWDGVTTKXFC 503
Query: 174 GTPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPY 211
GTP+++APE+ + Y + D ++FG+ + EM+ + P+
Sbjct: 504 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
++ L H ++ Y ++ DD+ + +G L +Y + +I+
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPE 177
S L YLH IIHRDLK +NI +N + ++I D G A ++ +QA A +GT +
Sbjct: 143 SALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 178 FMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSK 235
+++PEL E + + +D+++ G + ++V P+ N I++K+ IK +
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPE 255
Query: 236 VKDPEVKSFIEKCLV-PASQRLSAKEL 261
P+ + +EK LV A++RL +E+
Sbjct: 256 KFFPKARDLVEKLLVLDATKRLGCEEM 282
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 11/123 (8%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA--TIMEQANAKSVIGTPEFMAPELYD 185
H H II+RDLK +NI ++ +G +K+ D GL+ +I + A S GT E+MAPE+ +
Sbjct: 142 HLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 200
Query: 186 E-NYNELADIYSFGMCMLEMVTFEYPY--SECRNSAQIYKKVSSGIKPAALSKVKDPEVK 242
+ + AD +SFG+ M EM+T P+ + + + + K G+ P LS PE +
Sbjct: 201 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM-PQFLS----PEAQ 255
Query: 243 SFI 245
S +
Sbjct: 256 SLL 258
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 11/123 (8%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA--TIMEQANAKSVIGTPEFMAPELYD 185
H H II+RDLK +NI ++ +G +K+ D GL+ +I + A S GT E+MAPE+ +
Sbjct: 141 HLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 186 E-NYNELADIYSFGMCMLEMVTFEYPY--SECRNSAQIYKKVSSGIKPAALSKVKDPEVK 242
+ + AD +SFG+ M EM+T P+ + + + + K G+ P LS PE +
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM-PQFLS----PEAQ 254
Query: 243 SFI 245
S +
Sbjct: 255 SLL 257
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 24/254 (9%)
Query: 21 DTSGYKAF-------DEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR 73
DT G F E+ G +VA ++ ++S + + ++ E+ LK +H +II+
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVA-VKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 74 FYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPP 133
Y + + ++ E + G L Y +QILSG+ Y H H
Sbjct: 81 LYQ--VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH--M 136
Query: 134 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN-AKSVIGTPEFMAPELYDENY--NE 190
++HRDLK +N+ ++ + KI D GL+ +M + G+P + APE+
Sbjct: 137 VVHRDLKPENVLLDAHMN-AKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGP 195
Query: 191 LADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGI--KPAALSKVKDPEVKSFIEKC 248
DI+S G+ + ++ P+ + + ++KK+ GI P L +P V S ++
Sbjct: 196 EVDIWSSGVILYALLCGTLPFDD-DHVPTLFKKICDGIFYTPQYL----NPSVISLLKHM 250
Query: 249 L-VPASQRLSAKEL 261
L V +R + K++
Sbjct: 251 LQVDPMKRATIKDI 264
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 52 DLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX 111
++ ++ E+ +++ L+H ++ + S+ D+++ + ++ +L G LR +
Sbjct: 58 EVRNVFKELQIMQGLEHPFLVNLWYSFQDEED--MFMVVDLLLGGDLRYHLQQNVHFKEE 115
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM-EQANAK 170
+ +++ L YL + IIHRD+K DNI ++ G V I D +A ++ +
Sbjct: 116 TVKLFICELVMALDYLQNQR--IIHRDMKPDNILLD-EHGHVHITDFNIAAMLPRETQIT 172
Query: 171 SVIGTPEFMAPELYDE----NYNELADIYSFGMCMLEMVTFEYPYS--ECRNSAQIYKKV 224
++ GT +MAPE++ Y+ D +S G+ E++ PY +S +I
Sbjct: 173 TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF 232
Query: 225 SSGI--KPAALSKVKDPEVKSFIEKCLVP-ASQRLS 257
+ + P+A S+ E+ S ++K L P QR S
Sbjct: 233 ETTVVTYPSAWSQ----EMVSLLKKLLEPNPDQRFS 264
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 51 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 101
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 102 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Q+ G+ YL S IHRDL N+ + N +
Sbjct: 140 MEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VM 196
Query: 154 KIGDLGLATIMEQANA--KSVIG--TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 207
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 197 KIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 208 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 263
YP ++ K+ KPA + E+ + C VP SQR + K+L+
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 311
Query: 264 D 264
D
Sbjct: 312 D 312
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
++ L H ++ Y ++ DD+ + +G L +Y + +I+
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPE 177
S L YLH IIHRDLK +NI +N + ++I D G A ++ +QA A +GT +
Sbjct: 141 SALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 178 FMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSK 235
+++PEL E + + +D+++ G + ++V P+ N I++K+ IK +
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPE 253
Query: 236 VKDPEVKSFIEKCLV-PASQRLSAKEL 261
P+ + +EK LV A++RL +E+
Sbjct: 254 KFFPKARDLVEKLLVLDATKRLGCEEM 280
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 21/196 (10%)
Query: 56 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXX 114
E ++ H NIIR + ++K V I+TE +GSL + R
Sbjct: 93 FLGEASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLV 150
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSV 172
G R I SG+ YL D +HRDL NI IN N K+ D GL+ ++E A +
Sbjct: 151 GMLRGIASGMKYLS--DMGAVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTT 207
Query: 173 IGTP---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSG 227
G + +PE + + +D++S+G+ + E++++ E PY E N + K V G
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEG 266
Query: 228 IK-------PAALSKV 236
+ PAAL ++
Sbjct: 267 YRLPPPMDCPAALYQL 282
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
++ L H ++ Y ++ DD+ + +G L +Y + +I+
Sbjct: 63 VMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIV 120
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPE 177
S L YLH IIHRDLK +NI +N + ++I D G A ++ +QA A +GT +
Sbjct: 121 SALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQ 177
Query: 178 FMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSK 235
+++PEL E + + +D+++ G + ++V P+ N I++K+ IK +
Sbjct: 178 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPE 233
Query: 236 VKDPEVKSFIEKCLV-PASQRLSAKEL 261
P+ + +EK LV A++RL +E+
Sbjct: 234 KFFPKARDLVEKLLVLDATKRLGCEEM 260
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 11/123 (8%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA--TIMEQANAKSVIGTPEFMAPELYD 185
H H II+RDLK +NI ++ +G +K+ D GL+ +I + A S GT E+MAPE+ +
Sbjct: 141 HLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 186 E-NYNELADIYSFGMCMLEMVTFEYPY--SECRNSAQIYKKVSSGIKPAALSKVKDPEVK 242
+ + AD +SFG+ M EM+T P+ + + + + K G+ P LS PE +
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM-PQFLS----PEAQ 254
Query: 243 SFI 245
S +
Sbjct: 255 SLL 257
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 51 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 101
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 128 KDLSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPG 185
Query: 102 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Q+ G+ YL S IHRDL N+ + N +
Sbjct: 186 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VM 242
Query: 154 KIGDLGLATIMEQAN--AKSVIG--TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 207
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 243 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 302
Query: 208 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 263
YP ++ K+ KPA + E+ + C VP SQR + K+L+
Sbjct: 303 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 357
Query: 264 D 264
D
Sbjct: 358 D 358
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 89/199 (44%), Gaps = 17/199 (8%)
Query: 40 QVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVN----IITELF 93
QV I Q SP++ ER E+ ++K L H N++ Q N + E
Sbjct: 42 QVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYC 101
Query: 94 TSGSLRQYRXXXXXXXXXXXXGWARQIL----SGLIYLHSHDPPIIHRDLKCDNIFIN-G 148
G LR+Y G R +L S L YLH + IIHRDLK +NI + G
Sbjct: 102 EGGDLRKY-LNQFENCCGLKEGPIRTLLSDISSALRYLHENR--IIHRDLKPENIVLQPG 158
Query: 149 NQGEV-KIGDLGLATIMEQAN-AKSVIGTPEFMAPELYDE-NYNELADIYSFGMCMLEMV 205
Q + KI DLG A ++Q +GT +++APEL ++ Y D +SFG E +
Sbjct: 159 PQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECI 218
Query: 206 TFEYPYSECRNSAQIYKKV 224
T P+ Q + KV
Sbjct: 219 TGFRPFLPNWQPVQWHGKV 237
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 51 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 101
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 102 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Q+ G+ YL S IHRDL N+ + N +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VM 196
Query: 154 KIGDLGLATIMEQANA--KSVIG--TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 207
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 197 KIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 208 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 263
YP ++ K+ KPA + E+ + C VP SQR + K+L+
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 311
Query: 264 D 264
D
Sbjct: 312 D 312
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 26/213 (12%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
E + EV ++ +L H NI++ Y + ++ E G L Y
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGL----MHNPPRMVMEFVPCGDL--YHRLLDKAHP 118
Query: 111 XXXXGWARQILS---GLIYLHSHDPPIIHRDLKCDNIFINGNQGE----VKIGDLGLATI 163
R +L G+ Y+ + +PPI+HRDL+ NIF+ K+ D L+
Sbjct: 119 IKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS-- 176
Query: 164 MEQANAKSV---IGTPEFMAPELY---DENYNELADIYSFGMCMLEMVTFEYPYSECRNS 217
Q + SV +G ++MAPE +E+Y E AD YSF M + ++T E P+ E
Sbjct: 177 --QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
Query: 218 AQIYKKV--SSGIKPAALSKVKDPEVKSFIEKC 248
+ + G++P + + P +++ IE C
Sbjct: 235 KIKFINMIREEGLRP-TIPEDCPPRLRNVIELC 266
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 15/232 (6%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 117
E+ LL+ L+H N+I+ + +++ + + ++ E G G+
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA----KSVI 173
Q++ GL YLHS I+H+D+K N+ + G +KI LG+A + A ++
Sbjct: 116 CQLIDGLEYLHSQG--IVHKDIKPGNLLLT-TGGTLKISALGVAEALHPFAADDTCRTSQ 172
Query: 174 GTPEFMAPEL---YDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKP 230
G+P F PE+ D DI+S G+ + + T YP+ E N ++++ + G
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF-EGDNIYKLFENIGKG--S 229
Query: 231 AALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLP 281
A+ P + ++ L ++R S +++ + + P+P+P
Sbjct: 230 YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIP 281
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 89/199 (44%), Gaps = 17/199 (8%)
Query: 40 QVRIDDVLQ--SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVN----IITELF 93
QV I Q SP++ ER E+ ++K L H N++ Q N + E
Sbjct: 41 QVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYC 100
Query: 94 TSGSLRQYRXXXXXXXXXXXXGWARQIL----SGLIYLHSHDPPIIHRDLKCDNIFIN-G 148
G LR+Y G R +L S L YLH + IIHRDLK +NI + G
Sbjct: 101 EGGDLRKY-LNQFENCCGLKEGPIRTLLSDISSALRYLHENR--IIHRDLKPENIVLQPG 157
Query: 149 NQGEV-KIGDLGLATIMEQAN-AKSVIGTPEFMAPELYDE-NYNELADIYSFGMCMLEMV 205
Q + KI DLG A ++Q +GT +++APEL ++ Y D +SFG E +
Sbjct: 158 PQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECI 217
Query: 206 TFEYPYSECRNSAQIYKKV 224
T P+ Q + KV
Sbjct: 218 TGFRPFLPNWQPVQWHGKV 236
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 117
E ++ H NIIR + ++K V I+TE +GSL + R G
Sbjct: 96 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGT 175
R I SG+ YL D +HRDL NI IN N K+ D GL+ ++E A + G
Sbjct: 154 RGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 176 P---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK- 229
+ +PE + + +D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRL 269
Query: 230 ------PAALSKV 236
PAAL ++
Sbjct: 270 PPPMDCPAALYQL 282
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
++ L H ++ Y ++ DD+ + +G L +Y + +I+
Sbjct: 62 VMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIV 119
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPE 177
S L YLH IIHRDLK +NI +N + ++I D G A ++ +QA A +GT +
Sbjct: 120 SALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQ 176
Query: 178 FMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSK 235
+++PEL E + + +D+++ G + ++V P+ N I++K+ IK +
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPE 232
Query: 236 VKDPEVKSFIEKCLV-PASQRLSAKEL 261
P+ + +EK LV A++RL +E+
Sbjct: 233 KFFPKARDLVEKLLVLDATKRLGCEEM 259
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
++ L H ++ Y ++ DD+ + +G L +Y + +I+
Sbjct: 60 VMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIV 117
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPE 177
S L YLH IIHRDLK +NI +N + ++I D G A ++ +QA A +GT +
Sbjct: 118 SALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQ 174
Query: 178 FMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSK 235
+++PEL E + + +D+++ G + ++V P+ N I++K+ IK +
Sbjct: 175 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPE 230
Query: 236 VKDPEVKSFIEKCLV-PASQRLSAKEL 261
P+ + +EK LV A++RL +E+
Sbjct: 231 KFFPKARDLVEKLLVLDATKRLGCEEM 257
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
++ L H ++ Y ++ DD+ + +G L +Y + +I+
Sbjct: 61 VMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIV 118
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPE 177
S L YLH IIHRDLK +NI +N + ++I D G A ++ +QA A +GT +
Sbjct: 119 SALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQ 175
Query: 178 FMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSK 235
+++PEL E + + +D+++ G C++ + P N I++K+ IK +
Sbjct: 176 YVSPELLTEKSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI---IKLEYDFPE 231
Query: 236 VKDPEVKSFIEKCLV-PASQRLSAKEL 261
P+ + +EK LV A++RL +E+
Sbjct: 232 KFFPKARDLVEKLLVLDATKRLGCEEM 258
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 21/220 (9%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
LL+ +H NII + + D K V ++TEL G L I
Sbjct: 74 LLRYGQHPNIITLKDVY--DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG 131
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANAKSVIGTP-- 176
+ YLHS ++HRDLK NI +GN ++I D G A + N ++ TP
Sbjct: 132 KTVEYLHSQG--VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENG--LLMTPCY 187
Query: 177 --EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSA--QIYKKVSSG---I 228
F+APE L + Y+E DI+S G+ + M+ P++ + +I ++ SG +
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 229 KPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFL 267
+ V + K + K L V QRL+AK++L P++
Sbjct: 248 SGGNWNTVSE-TAKDLVSKMLHVDPHQRLTAKQVLQHPWV 286
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 117
E ++ H NIIR + ++K V I+TE +GSL + R G
Sbjct: 96 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGT 175
R I SG+ YL D +HRDL NI IN N K+ D GL+ ++E A + G
Sbjct: 154 RGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 176 P---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK- 229
+ +PE + + +D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRL 269
Query: 230 ------PAALSKV 236
PAAL ++
Sbjct: 270 PPPMDCPAALYQL 282
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 117
E ++ H NIIR + ++K V I+TE +GSL + R G
Sbjct: 96 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGT 175
R I SG+ YL D +HRDL NI IN N K+ D GL+ ++E A + G
Sbjct: 154 RGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 176 P---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK- 229
+ +PE + + +D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRL 269
Query: 230 ------PAALSKV 236
PAAL ++
Sbjct: 270 PPPMDCPAALYQL 282
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 117
E ++ H NIIR + ++K V I+TE +GSL + R G
Sbjct: 96 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGT 175
R I SG+ YL D +HRDL NI IN N K+ D GL+ ++E A + G
Sbjct: 154 RGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 176 P---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK- 229
+ +PE + + +D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRL 269
Query: 230 ------PAALSKV 236
PAAL ++
Sbjct: 270 PPPMDCPAALYQL 282
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 21/220 (9%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
LL+ +H NII + + D K V ++TEL G L I
Sbjct: 74 LLRYGQHPNIITLKDVY--DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG 131
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANAKSVIGTP-- 176
+ YLHS ++HRDLK NI +GN ++I D G A + N ++ TP
Sbjct: 132 KTVEYLHSQG--VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENG--LLMTPCY 187
Query: 177 --EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSA--QIYKKVSSG---I 228
F+APE L + Y+E DI+S G+ + M+ P++ + +I ++ SG +
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 229 KPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFL 267
+ V + K + K L V QRL+AK++L P++
Sbjct: 248 SGGNWNTVSE-TAKDLVSKMLHVDPHQRLTAKQVLQHPWV 286
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 117
E ++ H NIIR + ++K V I+TE +GSL + R G
Sbjct: 96 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGT 175
R I SG+ YL D +HRDL NI IN N K+ D GL+ ++E A + G
Sbjct: 154 RGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 176 P---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK- 229
+ +PE + + +D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRL 269
Query: 230 ------PAALSKV 236
PAAL ++
Sbjct: 270 PPPMDCPAALYQL 282
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
++ L H ++ Y + DD+ + +G L +Y + +I+
Sbjct: 90 VMSRLDHPFFVKLYFCFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIV 147
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPE 177
S L YLH IIHRDLK +NI +N + ++I D G A ++ +QA A +GT +
Sbjct: 148 SALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQ 204
Query: 178 FMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSK 235
+++PEL E + + +D+++ G + ++V P+ N I++K+ IK +
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPE 260
Query: 236 VKDPEVKSFIEKCLV-PASQRLSAKEL 261
P+ + +EK LV A++RL +E+
Sbjct: 261 KFFPKARDLVEKLLVLDATKRLGCEEM 287
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 21/194 (10%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW 116
E ++ H NIIR + ++K V I+TE +GSL + R G
Sbjct: 95 GEASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 117 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIG 174
R I SG+ YL D +HRDL NI IN N K+ D GL ++E A + G
Sbjct: 153 LRGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLGRVLEDDPEAAYTTRG 209
Query: 175 TP---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ +PE + + +D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYR 268
Query: 230 -------PAALSKV 236
PAAL ++
Sbjct: 269 LPPPMDCPAALYQL 282
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
++ L H ++ Y ++ DD+ + +G L +Y + +I+
Sbjct: 67 VMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIV 124
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPE 177
S L YLH IIHRDLK +NI +N + ++I D G A ++ +QA A +GT +
Sbjct: 125 SALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQ 181
Query: 178 FMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSK 235
+++PEL E + + +D+++ G + ++V P+ N I++K+ IK +
Sbjct: 182 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPE 237
Query: 236 VKDPEVKSFIEKCLV-PASQRLSAKEL 261
P+ + +EK LV A++RL +E+
Sbjct: 238 KFFPKARDLVEKLLVLDATKRLGCEEM 264
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 117
E ++ H NIIR + ++K V I+TE +GSL + R G
Sbjct: 94 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 151
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGT 175
R I SG+ YL D +HRDL NI IN N K+ D GL+ ++E A + G
Sbjct: 152 RGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGG 208
Query: 176 P---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK- 229
+ +PE + + +D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 209 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRL 267
Query: 230 ------PAALSKV 236
PAAL ++
Sbjct: 268 PPPMDCPAALYQL 280
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 19/146 (13%)
Query: 123 GLIYLHSH-DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN---AKSVIGTPEF 178
GL YLH H DP IIHRD+K NI ++ + E +GD GLA +M+ + +V GT
Sbjct: 151 GLAYLHDHCDPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGH 209
Query: 179 MAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECR----NSAQIYKKVSSGIKPAAL 233
+APE L +E D++ +G+ +LE++T + + R + + V +K L
Sbjct: 210 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 269
Query: 234 SKV---------KDPEVKSFIEKCLV 250
+ KD EV+ I+ L+
Sbjct: 270 EALVDVDLQGNYKDEEVEQLIQVALL 295
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 51 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 101
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIIHLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 102 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Q+ G+ YL S IHRDL N+ + N +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VM 196
Query: 154 KIGDLGLATIMEQAN--AKSVIG--TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 207
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 208 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 263
YP ++ K+ KPA + E+ + C VP SQR + K+L+
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 311
Query: 264 D 264
D
Sbjct: 312 D 312
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 23/168 (13%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNI--ITELFTSGSLRQYRXXXXXXXXXXXXG 115
+E++ ++H NI+ F + I + IT+ +GSL Y
Sbjct: 80 TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDY-LKSTTLDAKSMLK 138
Query: 116 WARQILSGLIYLHSH------DPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-IMEQAN 168
A +SGL +LH+ P I HRDLK NI + N G I DLGLA + N
Sbjct: 139 LAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVKFISDTN 197
Query: 169 AKSV-----IGTPEFMAPELYDENYNE-------LADIYSFGMCMLEM 204
+ +GT +M PE+ DE+ N +AD+YSFG+ + E+
Sbjct: 198 EVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 117
E ++ H NIIR + ++K V I+TE +GSL + R G
Sbjct: 84 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 141
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGT 175
R I SG+ YL D +HRDL NI IN N K+ D GL+ ++E A + G
Sbjct: 142 RGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGG 198
Query: 176 P---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK- 229
+ +PE + + +D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 199 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRL 257
Query: 230 ------PAALSKV 236
PAAL ++
Sbjct: 258 PPPMDCPAALYQL 270
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 117
E ++ H NIIR + ++K V I+TE +GSL + R G
Sbjct: 67 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 124
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGT 175
R I SG+ YL D +HRDL NI IN N K+ D GL+ ++E A + G
Sbjct: 125 RGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 176 P---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK- 229
+ +PE + + +D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRL 240
Query: 230 ------PAALSKV 236
PAAL ++
Sbjct: 241 PPPMDCPAALYQL 253
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 117
E ++ H NIIR + ++K V I+TE +GSL + R G
Sbjct: 67 EASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 124
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIGT 175
R I SG+ YL D +HRDL NI IN N K+ D GL+ ++E A + G
Sbjct: 125 RGIASGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 176 P---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK- 229
+ +PE + + +D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRL 240
Query: 230 ------PAALSKV 236
PAAL ++
Sbjct: 241 PPPMDCPAALYQL 253
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 104/241 (43%), Gaps = 37/241 (15%)
Query: 51 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 101
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 102 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Q+ G+ YL S IHRDL N+ + N +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VM 196
Query: 154 KIGDLGLA----TIMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 207
KI D GLA I N + ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 197 KIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 208 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 263
YP ++ K+ KPA + E+ + C VP SQR + K+L+
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 311
Query: 264 D 264
D
Sbjct: 312 D 312
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 18/227 (7%)
Query: 54 ERLYSEVHLLKSLK-HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX 112
E EV +L+ + H NII+ +++ + N ++ +L G L Y
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE 125
Query: 113 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA-NAKS 171
R +L + LH + I+HRDLK +NI ++ + +K+ D G + ++ +S
Sbjct: 126 TRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEKLRS 182
Query: 172 VIGTPEFMAPELYD-------ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 224
V GTP ++APE+ + Y + D++S G+ M ++ P+ R + + +
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH-RKQMLMLRMI 241
Query: 225 SSGIKPAALSKVKD--PEVKSFIEKCLVPASQ-RLSAKELLMDPFLQ 268
SG + D VK + + LV Q R +A+E L PF Q
Sbjct: 242 MSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 51 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 101
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 74 KDLSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPG 131
Query: 102 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Q+ G+ YL S IHRDL N+ + N +
Sbjct: 132 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VM 188
Query: 154 KIGDLGLATIMEQAN--AKSVIG--TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 207
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 189 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 248
Query: 208 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 263
YP ++ K+ KPA + E+ + C VP SQR + K+L+
Sbjct: 249 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 303
Query: 264 D 264
D
Sbjct: 304 D 304
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 51 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 101
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 71 KDLSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPG 128
Query: 102 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Q+ G+ YL S IHRDL N+ + N +
Sbjct: 129 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VM 185
Query: 154 KIGDLGLATIMEQAN--AKSVIG--TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 207
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 186 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 245
Query: 208 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 263
YP ++ K+ KPA + E+ + C VP SQR + K+L+
Sbjct: 246 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 300
Query: 264 D 264
D
Sbjct: 301 D 301
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 51 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 101
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 69 KDLSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPG 126
Query: 102 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Q+ G+ YL S IHRDL N+ + N +
Sbjct: 127 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLTARNVLVTENN-VM 183
Query: 154 KIGDLGLATIMEQAN--AKSVIG--TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 207
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 184 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 243
Query: 208 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 263
YP ++ K+ KPA + E+ + C VP SQR + K+L+
Sbjct: 244 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 298
Query: 264 D 264
D
Sbjct: 299 D 299
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 51 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 101
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIITLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 102 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Q+ G+ YL S IHRDL N+ + N +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VM 196
Query: 154 KIGDLGLATIMEQAN--AKSVIG--TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 207
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 208 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 263
YP ++ K+ KPA + E+ + C VP SQR + K+L+
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 311
Query: 264 D 264
D
Sbjct: 312 D 312
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 13/190 (6%)
Query: 41 VRIDDVLQSPEDLERLYS-EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR 99
V + + S D +R + E+ +LK+L + I+++ +++ ++ E SG LR
Sbjct: 43 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 102
Query: 100 QY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
+ + ++ QI G+ YL S +HRDL NI + ++ VKI D
Sbjct: 103 DFLQRHRARLDASRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVE-SEAHVKIADF 159
Query: 159 GLATIMEQANAKSVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYS 212
GLA ++ V+ P + APE L D ++ +D++SFG+ + E+ F Y
Sbjct: 160 GLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL--FTYCDK 217
Query: 213 ECRNSAQIYK 222
C SA+ +
Sbjct: 218 SCSPSAEFLR 227
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
+LKS I++ + ++I N V I EL + + + + I+
Sbjct: 77 VLKSHDCPYIVQCFGTFI--TNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIV 134
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK-SVIGTPEFMA 180
L YL +IHRD+K NI ++ +G++K+ D G++ + AK G +MA
Sbjct: 135 KALYYLKEKHG-VIHRDVKPSNILLD-ERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMA 192
Query: 181 PELYDE------NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALS 234
PE D +Y+ AD++S G+ ++E+ T ++PY C+ ++ KV P
Sbjct: 193 PERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPG 252
Query: 235 KVK-DPEVKSFIEKCLV 250
+ + +SF++ CL
Sbjct: 253 HMGFSGDFQSFVKDCLT 269
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
++ L H ++ Y ++ DD+ + +G L +Y + +I+
Sbjct: 82 VMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIV 139
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQANAKSVIGTPE 177
S L YLH IIHRDLK +NI +N + ++I D G A ++ +QA A +GT +
Sbjct: 140 SALEYLHGKG--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQ 196
Query: 178 FMAPELYDE-NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAA-LSK 235
+++PEL E + + +D+++ G C++ + P N I++K+ IK +
Sbjct: 197 YVSPELLTEKSACKSSDLWALG-CIIYQLVAGLPPFRAGNEYLIFQKI---IKLEYDFPE 252
Query: 236 VKDPEVKSFIEKCLV-PASQRLSAKEL 261
P+ + +EK LV A++RL +E+
Sbjct: 253 KFFPKARDLVEKLLVLDATKRLGCEEM 279
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA--TIMEQANAKSVI 173
+A +I GL +L S II+RDLK DN+ ++ ++G +KI D G+ I + K
Sbjct: 126 YAAEIAIGLFFLQSKG--IIYRDLKLDNVMLD-SEGHIKIADFGMCKENIWDGVTTKXFC 182
Query: 174 GTPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPY 211
GTP+++APE+ + Y + D ++FG+ + EM+ + P+
Sbjct: 183 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 221
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA--TIMEQANAKSVIGTPEFMAPELYD 185
H H II+RDLK +NI ++ +G +K+ D GL+ I + A S GT E+MAPE+ +
Sbjct: 145 HLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVN 203
Query: 186 -ENYNELADIYSFGMCMLEMVTFEYPY 211
+ ++ AD +S+G+ M EM+T P+
Sbjct: 204 RQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT--IMEQANAKSVI 173
+A +I GL +LH II+RDLK DN+ ++ ++G +KI D G+ +M+ +
Sbjct: 125 YAAEISIGLFFLHKRG--IIYRDLKLDNVMLD-SEGHIKIADFGMCKEHMMDGVTTREFC 181
Query: 174 GTPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPY 211
GTP+++APE+ + Y + D +++G+ + EM+ + P+
Sbjct: 182 GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF 220
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 51 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 101
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 102 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Q+ G+ YL S IHRDL N+ + N +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VM 196
Query: 154 KIGDLGLATIMEQAN--AKSVIG--TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 207
+I D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 197 RIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 208 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 263
YP ++ K+ KPA + E+ + C VP SQR + K+L+
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 311
Query: 264 D 264
D
Sbjct: 312 D 312
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 62 LLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQIL 121
LL+ +H NII + + D K V ++TEL G L I
Sbjct: 69 LLRYGQHPNIITLKDVY--DDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTIT 126
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFI---NGNQGEVKIGDLGLATIMEQANAKSVIGTP-- 176
+ YLH+ ++HRDLK NI +GN ++I D G A + N ++ TP
Sbjct: 127 KTVEYLHAQG--VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG--LLXTPCY 182
Query: 177 --EFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSA--QIYKKVSSG---I 228
F+APE+ + + Y+ DI+S G+ + +T P++ + +I ++ SG +
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSL 242
Query: 229 KPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFL 267
+ V D K + K L V QRL+A +L P++
Sbjct: 243 SGGYWNSVSD-TAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 13/190 (6%)
Query: 41 VRIDDVLQSPEDLERLYS-EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR 99
V + + S D +R + E+ +LK+L + I+++ + ++ E SG LR
Sbjct: 39 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLR 98
Query: 100 QY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
+ + ++ QI G+ YL S +HRDL NI + ++ VKI D
Sbjct: 99 DFLQRHRARLDASRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVE-SEAHVKIADF 155
Query: 159 GLATIMEQANAKSVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYS 212
GLA ++ V+ P + APE L D ++ +D++SFG+ + E+ F Y
Sbjct: 156 GLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL--FTYCDK 213
Query: 213 ECRNSAQIYK 222
C SA+ +
Sbjct: 214 SCSPSAEFLR 223
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 93/184 (50%), Gaps = 13/184 (7%)
Query: 53 LERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX--XXXX 110
++ E +L+K+L+H+ ++R Y + + + + IITE GSL +
Sbjct: 52 VQAFLEEANLMKTLQHDKLVRLYA--VVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL 109
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QAN 168
++ QI G+ Y+ + IHRDL+ N+ ++ + KI D GLA ++E +
Sbjct: 110 PKLIDFSAQIAEGMAYIERKN--YIHRDLRAANVLVSESL-MCKIADFGLARVIEDNEYT 166
Query: 169 AKSVIGTP-EFMAPELYDEN-YNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVS 225
A+ P ++ APE + + +D++SFG+ + E+VT+ + PY R +A + +S
Sbjct: 167 AREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYP-GRTNADVMTALS 225
Query: 226 SGIK 229
G +
Sbjct: 226 QGYR 229
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 27/182 (14%)
Query: 46 VLQSPEDLERLYSEVHLLKSLKHNNIIRFY-------NSWIDDQNKTVNIITELFTSGSL 98
VL P+ ++ E+ +++ L H+NI++ + + DD V +TEL + +
Sbjct: 45 VLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD----VGSLTELNSVYIV 100
Query: 99 RQYRXXXXXXXXXX-------XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQG 151
++Y + Q+L GL Y+HS + ++HRDLK N+FIN
Sbjct: 101 QEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANLFINTEDL 158
Query: 152 EVKIGDLGLATIME-----QANAKSVIGTPEFMAPELY--DENYNELADIYSFGMCMLEM 204
+KIGD GLA IM+ + + + T + +P L NY + D+++ G EM
Sbjct: 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEM 218
Query: 205 VT 206
+T
Sbjct: 219 LT 220
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 18/227 (7%)
Query: 54 ERLYSEVHLLKSLK-HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX 112
E EV +L+ + H NII+ +++ + N ++ +L G L Y
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE 125
Query: 113 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA-NAKS 171
R +L + LH + I+HRDLK +NI ++ + +K+ D G + ++ +
Sbjct: 126 TRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEKLRE 182
Query: 172 VIGTPEFMAPELYD-------ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 224
V GTP ++APE+ + Y + D++S G+ M ++ P+ R + + +
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH-RKQMLMLRMI 241
Query: 225 SSGIKPAALSKVKD--PEVKSFIEKCLVPASQ-RLSAKELLMDPFLQ 268
SG + D VK + + LV Q R +A+E L PF Q
Sbjct: 242 MSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 86/186 (46%), Gaps = 14/186 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
AFD G VA ++ QS +R Y E+ LLK +KH N+I + + ++
Sbjct: 41 AFDTKTGHRVA--VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 98
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
V ++T L G+ QIL GL Y+HS D IIHRDLK
Sbjct: 99 FNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 154
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMC 200
N+ +N + E+KI D LA + + T + APE+ +YN+ DI+S G
Sbjct: 155 NLAVNED-CELKILDFYLARHTDD-EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 201 MLEMVT 206
M E++T
Sbjct: 213 MAELLT 218
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 78/179 (43%), Gaps = 25/179 (13%)
Query: 49 SPEDLERLYSEVHLLKS--LKHNNIIRFYNSWIDDQNKTVNI--ITELFTSGSLRQYRXX 104
S D + + E L + L+H NI+ F S + ++ + + IT GSL Y
Sbjct: 40 SSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL 99
Query: 105 XXXXXXXXXXGWARQILSGLIYLH------SHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
I SGL +LH P I HRDLK NI + N G+ I DL
Sbjct: 100 TTLDTVSCLRI-VLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADL 157
Query: 159 GLATIMEQANAK------SVIGTPEFMAPELYDENYN-------ELADIYSFGMCMLEM 204
GLA + Q+ + +GT +MAPE+ DE + DI++FG+ + E+
Sbjct: 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 78/179 (43%), Gaps = 25/179 (13%)
Query: 49 SPEDLERLYSEVHLLKS--LKHNNIIRFYNSWIDDQNKTVNI--ITELFTSGSLRQYRXX 104
S D + + E L + L+H NI+ F S + ++ + + IT GSL Y
Sbjct: 69 SSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL 128
Query: 105 XXXXXXXXXXGWARQILSGLIYLH------SHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
I SGL +LH P I HRDLK NI + N G+ I DL
Sbjct: 129 TTLDTVSCLRI-VLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADL 186
Query: 159 GLATIMEQANAK------SVIGTPEFMAPELYDENYN-------ELADIYSFGMCMLEM 204
GLA + Q+ + +GT +MAPE+ DE + DI++FG+ + E+
Sbjct: 187 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 18/227 (7%)
Query: 54 ERLYSEVHLLKSLK-HNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX 112
E EV +L+ + H NII+ +++ + N ++ +L G L Y
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE 112
Query: 113 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA-NAKS 171
R +L + LH + I+HRDLK +NI ++ + +K+ D G + ++ +
Sbjct: 113 TRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEKLRE 169
Query: 172 VIGTPEFMAPELYD-------ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 224
V GTP ++APE+ + Y + D++S G+ M ++ P+ R + + +
Sbjct: 170 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH-RKQMLMLRMI 228
Query: 225 SSGIKPAALSKVKD--PEVKSFIEKCLVPASQ-RLSAKELLMDPFLQ 268
SG + D VK + + LV Q R +A+E L PF Q
Sbjct: 229 MSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 275
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 78/179 (43%), Gaps = 25/179 (13%)
Query: 49 SPEDLERLYSEVHLLKS--LKHNNIIRFYNSWIDDQNKTVNI--ITELFTSGSLRQYRXX 104
S D + + E L + L+H NI+ F S + ++ + + IT GSL Y
Sbjct: 40 SSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL 99
Query: 105 XXXXXXXXXXGWARQILSGLIYLH------SHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
I SGL +LH P I HRDLK NI + N G+ I DL
Sbjct: 100 TTLDTVSCLRI-VLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADL 157
Query: 159 GLATIMEQANAK------SVIGTPEFMAPELYDENYN-------ELADIYSFGMCMLEM 204
GLA + Q+ + +GT +MAPE+ DE + DI++FG+ + E+
Sbjct: 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 122/266 (45%), Gaps = 15/266 (5%)
Query: 24 GYKAFDEVN-GLEVAWCQVRIDDVLQSPEDLER--LYSEVHLLKSLKHNNIIRFYNSWID 80
G AF V+ +E A +V + + +P L++ + +E+ ++ L H +I ++++ +
Sbjct: 60 GSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF-E 118
Query: 81 DQNKTVNIITELFTSGSL-RQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDL 139
D+ + V +I E + G L + + RQ GL ++H H I+H D+
Sbjct: 119 DKYEMV-LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS--IVHLDI 175
Query: 140 KCDNIFINGNQG-EVKIGDLGLATIMEQAN-AKSVIGTPEFMAPELYD-ENYNELADIYS 196
K +NI + VKI D GLAT + K T EF APE+ D E D+++
Sbjct: 176 KPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWA 235
Query: 197 FGMCMLEMVTFEYPYS--ECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-AS 253
G+ +++ P++ + + Q K+ A S V PE K FI+ L
Sbjct: 236 IGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSV-SPEAKDFIKNLLQKEPR 294
Query: 254 QRLSAKELLMDPFLQVNGTTKNRPLP 279
+RL+ + L P+L+ + + +P
Sbjct: 295 KRLTVHDALEHPWLKGDHSNLTSRIP 320
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 19/146 (13%)
Query: 123 GLIYLHSH-DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN---AKSVIGTPEF 178
GL YLH H DP IIHRD+K NI ++ + E +GD GLA +M+ + +V G
Sbjct: 143 GLAYLHDHCDPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGH 201
Query: 179 MAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECR----NSAQIYKKVSSGIKPAAL 233
+APE L +E D++ +G+ +LE++T + + R + + V +K L
Sbjct: 202 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 261
Query: 234 SKV---------KDPEVKSFIEKCLV 250
+ KD EV+ I+ L+
Sbjct: 262 EALVDVDLQGNYKDEEVEQLIQVALL 287
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 41/227 (18%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSW---------IDD------------------QNKTV 86
E+ EV L L H NI+ + W DD + K +
Sbjct: 50 EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCL 109
Query: 87 NIITELFTSGSLRQY--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNI 144
I E G+L Q+ + QI G+ Y+HS +IHRDLK NI
Sbjct: 110 FIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS--KKLIHRDLKPSNI 167
Query: 145 FINGNQGEVKIGDLGLATIMEQANAKS-VIGTPEFMAPE-LYDENYNELADIYSFGMCML 202
F+ + +VKIGD GL T ++ ++ GT +M+PE + ++Y + D+Y+ G+ +
Sbjct: 168 FLVDTK-QVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILA 226
Query: 203 EMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL 249
E++ C ++A K + ++ +S + D + K+ ++K L
Sbjct: 227 ELLHV------C-DTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLL 266
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 104/245 (42%), Gaps = 17/245 (6%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN--- 83
AFD V G+ VA ++ Q+ +R Y E+ LLK + H NII N + +
Sbjct: 41 AFDTVLGINVA--VKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEE 98
Query: 84 -KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
+ V ++ EL + + Q+L G+ +LHS IIHRDLK
Sbjct: 99 FQDVYLVMELMDANLCQVIHMELDHERMSYLL---YQMLCGIKHLHSAG--IIHRDLKPS 153
Query: 143 NIFINGNQGEVKIGDLGLA-TIMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMC 200
NI + + +KI D GLA T + T + APE + Y E DI+S G
Sbjct: 154 NIVVKSD-CTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 212
Query: 201 MLEMVTFEYPYSECRNSAQIYKKVSS-GIKPAALSKVKDPEVKSFIEKCLVPASQRLSAK 259
M E+V + + Q K + G A P V++++E PA ++ +
Sbjct: 213 MGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVEN--RPAYPGIAFE 270
Query: 260 ELLMD 264
EL D
Sbjct: 271 ELFPD 275
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 21/194 (10%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW 116
E ++ H NII + ++K V I+TE +GSL + + G
Sbjct: 72 GEASIMGQFDHPNIIHLEG--VVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGM 129
Query: 117 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIG 174
R I +G+ YL D +HRDL NI IN N K+ D GL+ ++E A + G
Sbjct: 130 LRGISAGMKYLS--DMGYVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRG 186
Query: 175 TP---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ APE + + +D++S+G+ M E+V++ E PY E N + K V G +
Sbjct: 187 GKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQ-DVIKAVEEGYR 245
Query: 230 -------PAALSKV 236
PAAL ++
Sbjct: 246 LPSPMDCPAALYQL 259
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 105/241 (43%), Gaps = 37/241 (15%)
Query: 51 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 101
+DL L SE+ ++K + KH NII + Q+ + +I + G+LR+Y
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVAYASKGNLREYLRARRPPG 139
Query: 102 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Q+ G+ YL S IHRDL N+ + N +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VM 196
Query: 154 KIGDLGLATIMEQAN--AKSVIG--TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 207
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 208 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 263
YP ++ K+ KPA + E+ + C VP SQR + K+L+
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 311
Query: 264 D 264
D
Sbjct: 312 D 312
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 32/249 (12%)
Query: 41 VRIDDVLQ-------SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELF 93
V+I DV + S EDL+R S H+LK H +I+ ++ D + ++ E
Sbjct: 56 VKIVDVAKFTSSPGLSTEDLKREASICHMLK---HPHIVELLETYSSD--GMLYMVFEFM 110
Query: 94 TSGSL----RQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLK--CDNIFIN 147
L + + RQIL L Y HD IIHRD+K C +
Sbjct: 111 DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY--CHDNNIIHRDVKPHCVLLASK 168
Query: 148 GNQGEVKIGDLGLATIMEQAN--AKSVIGTPEFMAPELYD-ENYNELADIYSFGMCMLEM 204
N VK+G G+A + ++ A +GTP FMAPE+ E Y + D++ G+ + +
Sbjct: 169 ENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFIL 228
Query: 205 VTFEYPYSECRNSAQIYKKVSSG---IKPAALSKVKDPEVKSFIEKCLV--PASQRLSAK 259
++ P+ + ++++ + G + P S + + K + + L+ PA +R++
Sbjct: 229 LSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWSHISE-SAKDLVRRMLMLDPA-ERITVY 284
Query: 260 ELLMDPFLQ 268
E L P+L+
Sbjct: 285 EALNHPWLK 293
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 82/190 (43%), Gaps = 13/190 (6%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQSPEDLE-RLYSEVHLLKSLK---HNNIIRFYNSWID 80
YKA D +G VA VR+ + L EV LL+ L+ H N++R +
Sbjct: 26 YKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85
Query: 81 DQNKTVNIITELF--TSGSLRQY--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIH 136
+ +T +F LR Y + RQ L GL +LH++ I+H
Sbjct: 86 SRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC--IVH 143
Query: 137 RDLKCDNIFINGNQGEVKIGDLGLATIME-QANAKSVIGTPEFMAPE-LYDENYNELADI 194
RDLK +NI + G VK+ D GLA I Q V+ T + APE L Y D+
Sbjct: 144 RDLKPENILVTSG-GTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDM 202
Query: 195 YSFGMCMLEM 204
+S G EM
Sbjct: 203 WSVGCIFAEM 212
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 10/187 (5%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA D +G VA VR+ + + P R + + L++ +H N++R + +
Sbjct: 21 YKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT 80
Query: 84 KTVNIITELF--TSGSLRQY--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDL 139
+T +F LR Y + RQ L GL +LH++ I+HRDL
Sbjct: 81 DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC--IVHRDL 138
Query: 140 KCDNIFINGNQGEVKIGDLGLATIME-QANAKSVIGTPEFMAPE-LYDENYNELADIYSF 197
K +NI + G VK+ D GLA I Q V+ T + APE L Y D++S
Sbjct: 139 KPENILVTSG-GTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSV 197
Query: 198 GMCMLEM 204
G EM
Sbjct: 198 GCIFAEM 204
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 14/203 (6%)
Query: 53 LERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXX--XXXXXX 110
++ E +L+K+L+H+ ++R Y + + + + IITE GSL +
Sbjct: 51 VQAFLEEANLMKTLQHDKLVRLYA--VVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL 108
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QAN 168
++ QI G+ Y+ + IHRDL+ N+ ++ + KI D GLA ++E +
Sbjct: 109 PKLIDFSAQIAEGMAYIERKN--YIHRDLRAANVLVSESL-MCKIADFGLARVIEDNEYT 165
Query: 169 AKSVIGTP-EFMAPELYDEN-YNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVS 225
A+ P ++ APE + + ++++SFG+ + E+VT+ + PY R +A + +S
Sbjct: 166 AREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYP-GRTNADVMSALS 224
Query: 226 SGIKPAALSKVKDPEVKSFIEKC 248
G + + D E+ ++ C
Sbjct: 225 QGYRMPRMENCPD-ELYDIMKMC 246
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 8/170 (4%)
Query: 46 VLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXX 105
++++ +D +E ++L+ +KH I+ ++ + +I E + G L
Sbjct: 58 IVRNAKDTAHTKAERNILEEVKHPFIVDLIYAF--QTGGKLYLILEYLSGGELFMQLERE 115
Query: 106 XXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA--TI 163
+ +I L +LH II+RDLK +NI +N +QG VK+ D GL +I
Sbjct: 116 GIFMEDTACFYLAEISMALGHLHQKG--IIYRDLKPENIMLN-HQGHVKLTDFGLCKESI 172
Query: 164 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYS 212
+ + GT E+MAPE L +N D +S G M +M+T P++
Sbjct: 173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 21/176 (11%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 118
E+ LL+ LKH N+I ++ ++ V ++ + + R
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 119 --------QILSGLIYLHSHDPPIIHRDLKCDNIFING---NQGEVKIGDLGLATIMEQ- 166
QIL G+ YLH++ ++HRDLK NI + G +G VKI D+G A +
Sbjct: 128 GMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 185
Query: 167 ----ANAKSVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMVTFEYPYSECRN 216
A+ V+ T + APEL +Y + DI++ G E++T E P CR
Sbjct: 186 LKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE-PIFHCRQ 240
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 28/214 (13%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSW--------------IDDQNKTVNIITELFTSGSLR 99
E+ EV L L H NI+ + W + K + I E G+L
Sbjct: 49 EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLE 108
Query: 100 QY--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 157
Q+ + QI G+ Y+HS +I+RDLK NIF+ + +VKIGD
Sbjct: 109 QWIEKRRGEKLDKVLALELFEQITKGVDYIHS--KKLINRDLKPSNIFLVDTK-QVKIGD 165
Query: 158 LGLATIMEQANAKS-VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECR 215
GL T ++ + GT +M+PE + ++Y + D+Y+ G+ + E++ C
Sbjct: 166 FGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHV------C- 218
Query: 216 NSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL 249
++A K + ++ +S + D + K+ ++K L
Sbjct: 219 DTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLL 252
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 134 IIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPEFMAPELYD-----EN 187
IIHRD+K NI ++ G +K+ D G++ + + AK+ G +MAPE D +
Sbjct: 147 IIHRDIKPSNILLD-RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQG 205
Query: 188 YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD----PEVKS 243
Y+ +D++S G+ + E+ T +PY + + +V G P LS ++ P +
Sbjct: 206 YDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKG-DPPQLSNSEEREFSPSFIN 264
Query: 244 FIEKCLVP-ASQRLSAKELLMDPFL 267
F+ CL S+R KELL PF+
Sbjct: 265 FVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 10/187 (5%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA D +G VA VR+ + + P R + + L++ +H N++R + +
Sbjct: 21 YKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT 80
Query: 84 KTVNIITELF--TSGSLRQY--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDL 139
+T +F LR Y + RQ L GL +LH++ I+HRDL
Sbjct: 81 DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC--IVHRDL 138
Query: 140 KCDNIFINGNQGEVKIGDLGLATIME-QANAKSVIGTPEFMAPE-LYDENYNELADIYSF 197
K +NI + G VK+ D GLA I Q V+ T + APE L Y D++S
Sbjct: 139 KPENILVTSG-GTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSV 197
Query: 198 GMCMLEM 204
G EM
Sbjct: 198 GCIFAEM 204
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 107/234 (45%), Gaps = 25/234 (10%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL----RQYRXX 104
S EDL+R S H+LK H +I+ ++ D + ++ E L +
Sbjct: 69 STEDLKREASICHMLK---HPHIVELLETYSSD--GMLYMVFEFMDGADLCFEIVKRADA 123
Query: 105 XXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFING--NQGEVKIGDLGLAT 162
+ RQIL L Y HD IIHRD+K + + N VK+G G+A
Sbjct: 124 GFVYSEAVASHYMRQILEALRY--CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAI 181
Query: 163 IMEQAN--AKSVIGTPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQ 219
+ ++ A +GTP FMAPE+ E Y + D++ G+ + +++ P+ + +
Sbjct: 182 QLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--R 239
Query: 220 IYKKVSSG---IKPAALSKVKDPEVKSFIEKCLV--PASQRLSAKELLMDPFLQ 268
+++ + G + P S + + K + + L+ PA +R++ E L P+L+
Sbjct: 240 LFEGIIKGKYKMNPRQWSHISE-SAKDLVRRMLMLDPA-ERITVYEALNHPWLK 291
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 40 QVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR 99
+V I + + E E ++ L H +++ Y + + + ++TE G L
Sbjct: 34 KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG--VCLEQAPICLVTEFMEHGCLS 91
Query: 100 QY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y R G + G+ YL + +IHRDL N + NQ +K+ D
Sbjct: 92 DYLRTQRGLFAAETLLGMCLDVCEGMAYLE--EACVIHRDLAARNCLVGENQ-VIKVSDF 148
Query: 159 GLATIMEQANAKSVIGTP---EFMAPELYD-ENYNELADIYSFGMCMLEMVT-FEYPYSE 213
G+ + S GT ++ +PE++ Y+ +D++SFG+ M E+ + + PY E
Sbjct: 149 GMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-E 207
Query: 214 CRNSAQIYKKVSSGIK 229
R+++++ + +S+G +
Sbjct: 208 NRSNSEVVEDISTGFR 223
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 105/241 (43%), Gaps = 37/241 (15%)
Query: 51 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 101
+DL L SE+ ++K + KH NII + Q+ + +I + G+LR+Y
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVGYASKGNLREYLRARRPPG 139
Query: 102 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Q+ G+ YL S IHRDL N+ + N +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VM 196
Query: 154 KIGDLGLATIMEQAN--AKSVIG--TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 207
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ M E+ T
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 208 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 263
YP ++ K+ KPA + E+ + C VP SQR + K+L+
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 311
Query: 264 D 264
D
Sbjct: 312 D 312
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 10/187 (5%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA D +G VA VR+ + + P R + + L++ +H N++R + +
Sbjct: 21 YKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT 80
Query: 84 KTVNIITELF--TSGSLRQY--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDL 139
+T +F LR Y + RQ L GL +LH++ I+HRDL
Sbjct: 81 DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC--IVHRDL 138
Query: 140 KCDNIFINGNQGEVKIGDLGLATIME-QANAKSVIGTPEFMAPE-LYDENYNELADIYSF 197
K +NI + G VK+ D GLA I Q V+ T + APE L Y D++S
Sbjct: 139 KPENILVTSG-GTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSV 197
Query: 198 GMCMLEM 204
G EM
Sbjct: 198 GCIFAEM 204
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 8/170 (4%)
Query: 46 VLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXX 105
++++ +D +E ++L+ +KH I+ ++ + +I E + G L
Sbjct: 58 IVRNAKDTAHTKAERNILEEVKHPFIVDLIYAF--QTGGKLYLILEYLSGGELFMQLERE 115
Query: 106 XXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA--TI 163
+ +I L +LH II+RDLK +NI +N +QG VK+ D GL +I
Sbjct: 116 GIFMEDTACFYLAEISMALGHLHQKG--IIYRDLKPENIMLN-HQGHVKLTDFGLCKESI 172
Query: 164 MEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYS 212
+ GT E+MAPE L +N D +S G M +M+T P++
Sbjct: 173 HDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 82/173 (47%), Gaps = 12/173 (6%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
++I + P+ E ++ S+ H +++R + + T+ ++T+L G L +
Sbjct: 72 IKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCL---SPTIQLVTQLMPHGCLLE 128
Query: 101 Y-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLG 159
Y W QI G++YL ++HRDL N+ + + VKI D G
Sbjct: 129 YVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR--LVHRDLAARNVLVK-SPNHVKITDFG 185
Query: 160 LATIME----QANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
LA ++E + NA ++MA E ++ + +D++S+G+ + E++TF
Sbjct: 186 LARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTF 238
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 86/185 (46%), Gaps = 9/185 (4%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX 106
++S + + ++ E+ LK +H +II+ Y + ++ E + G L Y
Sbjct: 49 IRSLDVVGKIKREIQNLKLFRHPHIIKLYQ--VISTPTDFFMVMEYVSGGELFDYICKHG 106
Query: 107 XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ 166
+QILS + Y H H ++HRDLK +N+ ++ + KI D GL+ +M
Sbjct: 107 RVEEMEARRLFQQILSAVDYCHRH--MVVHRDLKPENVLLDAHM-NAKIADFGLSNMMSD 163
Query: 167 AN-AKSVIGTPEFMAPELYDENY--NELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 223
++ G+P + APE+ DI+S G+ + ++ P+ + + ++KK
Sbjct: 164 GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD-EHVPTLFKK 222
Query: 224 VSSGI 228
+ G+
Sbjct: 223 IRGGV 227
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 89/213 (41%), Gaps = 54/213 (25%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELF--------------- 93
+P+D+ER+ +EV L+K L H NI R Y + D+Q + ++ EL
Sbjct: 68 NPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ--YICLVMELCHGGHLLDKLNVFIDD 125
Query: 94 ------------------------TSGSLRQYRXXX-XXXXXXXXXGWARQILSGLIYLH 128
+GS+ +R RQI S L YLH
Sbjct: 126 STGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH 185
Query: 129 SHDPPIIHRDLKCDNIFINGNQG-EVKIGDLGLATIMEQAN------AKSVIGTPEFMAP 181
+ I HRD+K +N + N+ E+K+ D GL+ + N + GTP F+AP
Sbjct: 186 NQG--ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAP 243
Query: 182 ELY---DENYNELADIYSFGMCMLEMVTFEYPY 211
E+ +E+Y D +S G+ + ++ P+
Sbjct: 244 EVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPF 276
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 82/173 (47%), Gaps = 12/173 (6%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
++I + P+ E ++ S+ H +++R + + T+ ++T+L G L +
Sbjct: 49 IKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCL---SPTIQLVTQLMPHGCLLE 105
Query: 101 Y-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLG 159
Y W QI G++YL ++HRDL N+ + + VKI D G
Sbjct: 106 YVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR--LVHRDLAARNVLVK-SPNHVKITDFG 162
Query: 160 LATIME----QANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
LA ++E + NA ++MA E ++ + +D++S+G+ + E++TF
Sbjct: 163 LARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTF 215
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 15/171 (8%)
Query: 56 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXX 114
SE ++ +H NIIR + + V I+TE +G+L + R
Sbjct: 64 FLSEASIMGQFEHPNIIRLEG--VVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLV 121
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA----K 170
G R I SG+ YL +HRDL NI +N N K+ D GL+ +E+ ++
Sbjct: 122 GMLRGIASGMRYLAEMS--YVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTET 178
Query: 171 SVIGTP---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRN 216
S +G + APE + + +D +S+G+ M E+++F E PY + N
Sbjct: 179 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 229
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 118
E+ +LK LKH+NI++ Y+ + K + ++ E + +
Sbjct: 50 EISILKELKHSNIVKLYD--VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV--IGTP 176
Q+L+G+ Y HD ++HRDLK N+ IN +GE+KI D GLA K I T
Sbjct: 108 QLLNGIAY--CHDRRVLHRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKYTHEIVTL 164
Query: 177 EFMAPELY--DENYNELADIYSFGMCMLEMV 205
+ AP++ + Y+ DI+S G EMV
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 83/163 (50%), Gaps = 14/163 (8%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-IMEQANAKSVIG 174
+A +I GL LH I++RDLK +NI ++ + G ++I DLGLA + E K +G
Sbjct: 291 YAAEICCGLEDLHRER--IVYRDLKPENILLD-DHGHIRISDLGLAVHVPEGQTIKGRVG 347
Query: 175 TPEFMAPELY-DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK--PA 231
T +MAPE+ +E Y D ++ G + EM+ + P+ + R ++V +K P
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ-RKKKIKREEVERLVKEVPE 406
Query: 232 ALSKVKDPEVKSFIEKCLVP-ASQRL-----SAKELLMDPFLQ 268
S+ P+ +S + L ++RL SA+E+ P +
Sbjct: 407 EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFK 449
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 15/169 (8%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW 116
SE ++ +H NIIR + + V I+TE +G+L + R G
Sbjct: 64 SEASIMGQFEHPNIIRLEG--VVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGM 121
Query: 117 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA----KSV 172
R I SG+ YL +HRDL NI +N N K+ D GL+ +E+ ++ S
Sbjct: 122 LRGIASGMRYLAEMS--YVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTYTSS 178
Query: 173 IGTP---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRN 216
+G + APE + + +D +S+G+ M E+++F E PY + N
Sbjct: 179 LGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 227
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME-QANAKSVIGTPE 177
Q+L GL +LHSH ++HRDLK NI + + G++K+ D GLA I Q SV+ T
Sbjct: 128 QLLRGLDFLHSHR--VVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLW 184
Query: 178 FMAPE-LYDENYNELADIYSFGMCMLEM 204
+ APE L +Y D++S G EM
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME-QANAKSVIGTPE 177
Q+L GL +LHSH ++HRDLK NI + + G++K+ D GLA I Q SV+ T
Sbjct: 128 QLLRGLDFLHSHR--VVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLW 184
Query: 178 FMAPE-LYDENYNELADIYSFGMCMLEM 204
+ APE L +Y D++S G EM
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME-QANAKSVIGTPE 177
Q+L GL +LHSH ++HRDLK NI + + G++K+ D GLA I Q SV+ T
Sbjct: 128 QLLRGLDFLHSHR--VVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLW 184
Query: 178 FMAPE-LYDENYNELADIYSFGMCMLEM 204
+ APE L +Y D++S G EM
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 14/182 (7%)
Query: 56 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXX 114
SE ++ H NII + + K V IITE +GSL + R
Sbjct: 77 FLSEASIMGQFDHPNIIHLEG--VVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV 134
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSV 172
G R I SG+ YL D +HRDL NI +N N K+ D G++ ++E A +
Sbjct: 135 GMLRGIGSGMKYLS--DMSAVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTT 191
Query: 173 IGTP---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSG 227
G + APE + + +D++S+G+ M E++++ E PY + N + K + G
Sbjct: 192 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVIKAIEEG 250
Query: 228 IK 229
+
Sbjct: 251 YR 252
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 83/163 (50%), Gaps = 14/163 (8%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-IMEQANAKSVIG 174
+A +I GL LH I++RDLK +NI ++ + G ++I DLGLA + E K +G
Sbjct: 291 YAAEICCGLEDLHRER--IVYRDLKPENILLD-DHGHIRISDLGLAVHVPEGQTIKGRVG 347
Query: 175 TPEFMAPELY-DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK--PA 231
T +MAPE+ +E Y D ++ G + EM+ + P+ + R ++V +K P
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ-RKKKIKREEVERLVKEVPE 406
Query: 232 ALSKVKDPEVKSFIEKCLVP-ASQRL-----SAKELLMDPFLQ 268
S+ P+ +S + L ++RL SA+E+ P +
Sbjct: 407 EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFK 449
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRX--XXXXXXXX 111
E E ++K LKH+ +++ Y + + I+TE GSL +
Sbjct: 49 ESFLEEAQIMKKLKHDKLVQLYAV---VSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLP 105
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANA 169
A Q+ +G+ Y+ + IHRDL+ NI + GN KI D GLA ++E + A
Sbjct: 106 NLVDMAAQVAAGMAYIERMN--YIHRDLRSANILV-GNGLICKIADFGLARLIEDNEXTA 162
Query: 170 KSVIGTP-EFMAPE--LYDENYNELADIYSFGMCMLEMVT-FEYPYSECRNSAQIYKKVS 225
+ P ++ APE LY + +D++SFG+ + E+VT PY N+ ++ ++V
Sbjct: 163 RQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELVTKGRVPYPGM-NNREVLEQVE 220
Query: 226 SGIK-------PAALSKV------KDPE-------VKSFIE 246
G + P +L ++ KDPE ++SF+E
Sbjct: 221 RGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 114/272 (41%), Gaps = 39/272 (14%)
Query: 42 RIDDVLQSPEDLERLYSEVHLLKSLK--HNNIIRFYNSWIDDQNKTVNIITELFTSGSLR 99
RI D + P R+ EV LLK + + +IR + W + + V I+ + L
Sbjct: 45 RISDWGELPNG-TRVPMEVVLLKKVSSGFSGVIRLLD-WFERPDSFVLILERMEPVQDLF 102
Query: 100 QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLG 159
+ + Q+L + H H+ ++HRD+K +NI I+ N+GE+K+ D G
Sbjct: 103 DFITERGALQEELARSFFWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 160
Query: 160 LATIMEQANAKSVIGTPEFMAPEL--YDENYNELADIYSFGMCMLEMVTFEYPYSE---- 213
+++ GT + PE Y + A ++S G+ + +MV + P+
Sbjct: 161 SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 220
Query: 214 CRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELLMDPFLQVNGT 272
R ++VSS E + I CL + S R + +E+ P++Q
Sbjct: 221 IRGQVFFRQRVSS-------------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ---- 263
Query: 273 TKNRPLPLPDIVLPRVGAFGDRCLMSEGPASV 304
D++LP+ A +S GP+ V
Sbjct: 264 ---------DVLLPQETAEIHLHSLSPGPSKV 286
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 51 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 101
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 75 KDLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPG 132
Query: 102 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
A Q+ G+ YL S IHRDL N+ + + +
Sbjct: 133 LEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VM 189
Query: 154 KIGDLGLATIMEQANA--KSVIG--TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 207
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ + E+ T
Sbjct: 190 KIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 208 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 263
YP ++ K+ KP+ + E+ + C VP SQR + K+L+
Sbjct: 250 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 304
Query: 264 D 264
D
Sbjct: 305 D 305
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 107/224 (47%), Gaps = 14/224 (6%)
Query: 52 DLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL-RQYRXXXXXXXX 110
D E + E+ + L+H ++ ++++ DD N+ V +I E + G L +
Sbjct: 91 DKETVRKEIQTMSVLRHPTLVNLHDAFEDD-NEMV-MIYEFMSGGELFEKVADEHNKMSE 148
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNI-FINGNQGEVKIGDLGLATIME-QAN 168
+ RQ+ GL ++H ++ +H DLK +NI F E+K+ D GL ++ + +
Sbjct: 149 DEAVEYMRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 206
Query: 169 AKSVIGTPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS- 226
K GT EF APE+ + + D++S G+ +++ P+ N + + V S
Sbjct: 207 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG-GENDDETLRNVKSC 265
Query: 227 --GIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELLMDPFL 267
+ +A S + + + K FI K L+ + R++ + L P+L
Sbjct: 266 DWNMDDSAFSGISE-DGKDFIRKLLLADPNTRMTIHQALEHPWL 308
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 118
E+ +LK LKH+NI++ Y+ + K + ++ E + +
Sbjct: 50 EISILKELKHSNIVKLYD--VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV--IGTP 176
Q+L+G+ Y HD ++HRDLK N+ IN +GE+KI D GLA K + T
Sbjct: 108 QLLNGIAY--CHDRRVLHRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKYTHEVVTL 164
Query: 177 EFMAPELY--DENYNELADIYSFGMCMLEMV 205
+ AP++ + Y+ DI+S G EMV
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 9/185 (4%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX 106
++S + + ++ E+ LK +H +II+ Y + ++ E + G L Y
Sbjct: 49 IRSLDVVGKIKREIQNLKLFRHPHIIKLYQ--VISTPTDFFMVMEYVSGGELFDYICKHG 106
Query: 107 XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ 166
+QILS + Y H H ++HRDLK +N+ ++ + KI D GL+ +M
Sbjct: 107 RVEEMEARRLFQQILSAVDYCHRH--MVVHRDLKPENVLLDAHM-NAKIADFGLSNMMSD 163
Query: 167 AN-AKSVIGTPEFMAPELYDENY--NELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 223
+ G+P + APE+ DI+S G+ + ++ P+ + + ++KK
Sbjct: 164 GEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD-EHVPTLFKK 222
Query: 224 VSSGI 228
+ G+
Sbjct: 223 IRGGV 227
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 118
E+ +LK LKH+NI++ Y+ + K + ++ E + +
Sbjct: 50 EISILKELKHSNIVKLYD--VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV--IGTP 176
Q+L+G+ Y HD ++HRDLK N+ IN +GE+KI D GLA K + T
Sbjct: 108 QLLNGIAY--CHDRRVLHRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKYTHEVVTL 164
Query: 177 EFMAPELY--DENYNELADIYSFGMCMLEMV 205
+ AP++ + Y+ DI+S G EMV
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW 116
SE ++ H NII + + K V IITE +GSL + R G
Sbjct: 58 SEASIMGQFDHPNIIHLEG--VVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM 115
Query: 117 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIG 174
R I SG+ YL D +HRDL NI +N N K+ D G++ ++E A + G
Sbjct: 116 LRGIGSGMKYLS--DMSYVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRG 172
Query: 175 TP---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ APE + + +D++S+G+ M E++++ E PY + N + K + G +
Sbjct: 173 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVIKAIEEGYR 231
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Query: 86 VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIF 145
++ I +L G L + +A +I+ GL H H+ +++RDLK NI
Sbjct: 266 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE--HMHNRFVVYRDLKPANIL 323
Query: 146 INGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDEN--YNELADIYSFGMCMLE 203
++ G V+I DLGLA + + +GT +MAPE+ + Y+ AD +S G + +
Sbjct: 324 LD-EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 382
Query: 204 MVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL 249
++ P+ + + + + L PE++S +E L
Sbjct: 383 LLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLL 428
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Query: 86 VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIF 145
++ I +L G L + +A +I+ GL H H+ +++RDLK NI
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE--HMHNRFVVYRDLKPANIL 324
Query: 146 INGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDEN--YNELADIYSFGMCMLE 203
++ G V+I DLGLA + + +GT +MAPE+ + Y+ AD +S G + +
Sbjct: 325 LD-EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 204 MVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL 249
++ P+ + + + + L PE++S +E L
Sbjct: 384 LLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLL 429
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW 116
SE ++ H NII + + K V IITE +GSL + R G
Sbjct: 64 SEASIMGQFDHPNIIHLEG--VVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM 121
Query: 117 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ--ANAKSVIG 174
R I SG+ YL D +HRDL NI +N N K+ D G++ ++E A + G
Sbjct: 122 LRGIGSGMKYLS--DMSYVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRG 178
Query: 175 TP---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ APE + + +D++S+G+ M E++++ E PY + N + K + G +
Sbjct: 179 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVIKAIEEGYR 237
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 107/224 (47%), Gaps = 14/224 (6%)
Query: 52 DLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL-RQYRXXXXXXXX 110
D E + E+ + L+H ++ ++++ DD N+ V +I E + G L +
Sbjct: 197 DKETVRKEIQTMSVLRHPTLVNLHDAFEDD-NEMV-MIYEFMSGGELFEKVADEHNKMSE 254
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNI-FINGNQGEVKIGDLGLATIME-QAN 168
+ RQ+ GL ++H ++ +H DLK +NI F E+K+ D GL ++ + +
Sbjct: 255 DEAVEYMRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312
Query: 169 AKSVIGTPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS- 226
K GT EF APE+ + + D++S G+ +++ P+ N + + V S
Sbjct: 313 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG-GENDDETLRNVKSC 371
Query: 227 --GIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELLMDPFL 267
+ +A S + + + K FI K L+ + R++ + L P+L
Sbjct: 372 DWNMDDSAFSGISE-DGKDFIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 8/175 (4%)
Query: 56 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXG 115
L +E+ +LK +KH NI+ + I + ++ +L + G L
Sbjct: 53 LENEIAVLKKIKHENIVTLED--IYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL 110
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQ--GEVKIGDLGLATIMEQANAKSVI 173
+Q+LS + YLH + I+HRDLK +N+ + ++ I D GL+ + + +
Sbjct: 111 VIQQVLSAVKYLHENG--IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTAC 168
Query: 174 GTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
GTP ++APE L + Y++ D +S G+ ++ P+ E +++++K+ G
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE-ETESKLFEKIKEG 222
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 23/160 (14%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ------------ 166
QI + +LHS ++HRDLK NIF + VK+GD GL T M+Q
Sbjct: 172 QIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDV-VKVGDFGLVTAMDQDEEEQTVLTPMP 228
Query: 167 --ANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKK 223
A +GT +M+PE ++ NY+ DI+S G+ + E++ Y +S +I
Sbjct: 229 AYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL---YSFSTQMERVRIITD 285
Query: 224 VSSGIKPAALSKVKDPEVKSFIEKCLVPA-SQRLSAKELL 262
V + P ++ K P+ ++ L P+ ++R A +++
Sbjct: 286 VRNLKFPLLFTQ-KYPQEHMMVQDMLSPSPTERPEATDII 324
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 19/27 (70%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWID 80
E++ EV L L+H I+R++N+W++
Sbjct: 49 EKVMREVKALAKLEHPGIVRYFNAWLE 75
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Query: 86 VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIF 145
++ I +L G L + +A +I+ GL H H+ +++RDLK NI
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE--HMHNRFVVYRDLKPANIL 324
Query: 146 INGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDEN--YNELADIYSFGMCMLE 203
++ G V+I DLGLA + + +GT +MAPE+ + Y+ AD +S G + +
Sbjct: 325 LD-EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 204 MVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL 249
++ P+ + + + + L PE++S +E L
Sbjct: 384 LLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLL 429
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Query: 86 VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIF 145
++ I +L G L + +A +I+ GL H H+ +++RDLK NI
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE--HMHNRFVVYRDLKPANIL 324
Query: 146 INGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPELYDEN--YNELADIYSFGMCMLE 203
++ G V+I DLGLA + + +GT +MAPE+ + Y+ AD +S G + +
Sbjct: 325 LD-EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 204 MVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL 249
++ P+ + + + + L PE++S +E L
Sbjct: 384 LLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLL 429
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 17/190 (8%)
Query: 40 QVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR 99
+V + + Q + +E +L+K L+H ++R Y + + IITE +GSL
Sbjct: 39 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV---VTQEPIYIITEYMENGSLV 95
Query: 100 QYRXXXX--XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 157
+ A QI G+ ++ + IHRDL+ NI ++ + KI D
Sbjct: 96 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVS-DTLSCKIAD 152
Query: 158 LGLATIMEQANAKSVIGTP---EFMAPELYDENYNEL---ADIYSFGMCMLEMVTF-EYP 210
GLA ++E A + G ++ APE NY +D++SFG+ + E+VT P
Sbjct: 153 FGLARLIEDAEXTAREGAKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIP 210
Query: 211 YSECRNSAQI 220
Y N I
Sbjct: 211 YPGMTNPEVI 220
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 12/196 (6%)
Query: 40 QVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR 99
+V I + + E E ++ L H +++ Y + + + ++ E G L
Sbjct: 33 KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG--VCLEQAPICLVFEFMEHGCLS 90
Query: 100 QY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y R G + G+ YL + +IHRDL N + NQ +K+ D
Sbjct: 91 DYLRTQRGLFAAETLLGMCLDVCEGMAYLE--EASVIHRDLAARNCLVGENQ-VIKVSDF 147
Query: 159 GLATIMEQANAKSVIGTP---EFMAPELYD-ENYNELADIYSFGMCMLEMVT-FEYPYSE 213
G+ + S GT ++ +PE++ Y+ +D++SFG+ M E+ + + PY E
Sbjct: 148 GMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-E 206
Query: 214 CRNSAQIYKKVSSGIK 229
R+++++ + +S+G +
Sbjct: 207 NRSNSEVVEDISTGFR 222
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 51 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 101
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 67 KDLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPG 124
Query: 102 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
A Q+ G+ YL S IHRDL N+ + + +
Sbjct: 125 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VM 181
Query: 154 KIGDLGLATIMEQAN--AKSVIG--TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 207
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ + E+ T
Sbjct: 182 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 241
Query: 208 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 263
YP ++ K+ KP+ + E+ + C VP SQR + K+L+
Sbjct: 242 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 296
Query: 264 D 264
D
Sbjct: 297 D 297
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 51 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 101
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 64 KDLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPG 121
Query: 102 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
A Q+ G+ YL S IHRDL N+ + + +
Sbjct: 122 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VM 178
Query: 154 KIGDLGLATIMEQAN--AKSVIG--TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 207
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ + E+ T
Sbjct: 179 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 238
Query: 208 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 263
YP ++ K+ KP+ + E+ + C VP SQR + K+L+
Sbjct: 239 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 293
Query: 264 D 264
D
Sbjct: 294 D 294
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 53 LERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXX--XXXXXX 110
+E +E +++K+L+H+ +++ + + + IITE GSL +
Sbjct: 54 VEAFLAEANVMKTLQHDKLVKLHAV---VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL 110
Query: 111 XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QAN 168
++ QI G+ ++ + IHRDL+ NI ++ + KI D GLA ++E +
Sbjct: 111 PKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASL-VCKIADFGLARVIEDNEYT 167
Query: 169 AKSVIGTP-EFMAPELYD-ENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQI 220
A+ P ++ APE + ++ +D++SFG+ ++E+VT+ PY N I
Sbjct: 168 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 222
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 53 LERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX- 111
+E +E +++K+L+H+ +++ + + + IITE GSL +
Sbjct: 227 VEAFLAEANVMKTLQHDKLVKLHAV---VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL 283
Query: 112 -XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QAN 168
++ QI G+ ++ + IHRDL+ NI ++ + KI D GLA ++E +
Sbjct: 284 PKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASL-VCKIADFGLARVIEDNEYT 340
Query: 169 AKSVIGTP-EFMAPELYD-ENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQI 220
A+ P ++ APE + ++ +D++SFG+ ++E+VT+ PY N I
Sbjct: 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 395
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 51 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 101
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 75 KDLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQAREPPG 132
Query: 102 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
A Q+ G+ YL S IHRDL N+ + + +
Sbjct: 133 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VM 189
Query: 154 KIGDLGLATIMEQAN--AKSVIG--TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 207
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ + E+ T
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 208 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 263
YP ++ K+ KP+ + E+ + C VP SQR + K+L+
Sbjct: 250 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 304
Query: 264 D 264
D
Sbjct: 305 D 305
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 129 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-TIMEQANA----KSVIGTPEFMAPE- 182
SH IIHRD+K NI I+ VK+ D G+A I + N+ +VIGT ++++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 183 LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG-IKPAALSKVKDPEV 241
++ + +D+YS G + E++T E P++ + Y+ V I P+A + ++
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGLSADL 250
Query: 242 KSFIEKCLV--PASQRLSAKELLMDPFLQVNGTTKNRPLPLPD 282
+ + K L P ++ +A E+ D NG P L D
Sbjct: 251 DAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTD 293
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 12/196 (6%)
Query: 40 QVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR 99
+V I + + E E ++ L H +++ Y + + + ++ E G L
Sbjct: 36 KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG--VCLEQAPICLVFEFMEHGCLS 93
Query: 100 QY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y R G + G+ YL + +IHRDL N + NQ +K+ D
Sbjct: 94 DYLRTQRGLFAAETLLGMCLDVCEGMAYLE--EACVIHRDLAARNCLVGENQ-VIKVSDF 150
Query: 159 GLATIMEQANAKSVIGTP---EFMAPELYD-ENYNELADIYSFGMCMLEMVT-FEYPYSE 213
G+ + S GT ++ +PE++ Y+ +D++SFG+ M E+ + + PY E
Sbjct: 151 GMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-E 209
Query: 214 CRNSAQIYKKVSSGIK 229
R+++++ + +S+G +
Sbjct: 210 NRSNSEVVEDISTGFR 225
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 33/184 (17%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 188
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ R ++VSS E
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------EC 235
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVGAFGDRCLMSEG 300
+ I CL + S R + +E+ P++Q D++LP+ A +S G
Sbjct: 236 QHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQETAEIHLHSLSPG 282
Query: 301 PASV 304
P+ V
Sbjct: 283 PSKV 286
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 51 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 101
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 75 KDLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPG 132
Query: 102 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
A Q+ G+ YL S IHRDL N+ + + +
Sbjct: 133 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VM 189
Query: 154 KIGDLGLATIMEQAN--AKSVIG--TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 207
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ + E+ T
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 208 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 263
YP ++ K+ KP+ + E+ + C VP SQR + K+L+
Sbjct: 250 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 304
Query: 264 D 264
D
Sbjct: 305 D 305
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 51 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 101
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 75 KDLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPG 132
Query: 102 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
A Q+ G+ YL S IHRDL N+ + + +
Sbjct: 133 LEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VM 189
Query: 154 KIGDLGLATIMEQAN--AKSVIG--TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 207
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ + E+ T
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 208 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 263
YP ++ K+ KP+ + E+ + C VP SQR + K+L+
Sbjct: 250 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 304
Query: 264 D 264
D
Sbjct: 305 D 305
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 51 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 101
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 60 KDLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPG 117
Query: 102 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
A Q+ G+ YL S IHRDL N+ + + +
Sbjct: 118 LEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VM 174
Query: 154 KIGDLGLATIMEQAN--AKSVIG--TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 207
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ + E+ T
Sbjct: 175 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 234
Query: 208 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 263
YP ++ K+ KP+ + E+ + C VP SQR + K+L+
Sbjct: 235 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 289
Query: 264 D 264
D
Sbjct: 290 D 290
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 12/196 (6%)
Query: 40 QVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR 99
+V I + + E E ++ L H +++ Y + + + ++ E G L
Sbjct: 31 KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG--VCLEQAPICLVFEFMEHGCLS 88
Query: 100 QY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y R G + G+ YL + +IHRDL N + NQ +K+ D
Sbjct: 89 DYLRTQRGLFAAETLLGMCLDVCEGMAYLE--EACVIHRDLAARNCLVGENQ-VIKVSDF 145
Query: 159 GLATIMEQANAKSVIGTP---EFMAPELYD-ENYNELADIYSFGMCMLEMVT-FEYPYSE 213
G+ + S GT ++ +PE++ Y+ +D++SFG+ M E+ + + PY E
Sbjct: 146 GMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-E 204
Query: 214 CRNSAQIYKKVSSGIK 229
R+++++ + +S+G +
Sbjct: 205 NRSNSEVVEDISTGFR 220
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 12/196 (6%)
Query: 40 QVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR 99
+V I + + E E ++ L H +++ Y + + + ++ E G L
Sbjct: 33 KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG--VCLEQAPICLVFEFMEHGCLS 90
Query: 100 QY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y R G + G+ YL + +IHRDL N + NQ +K+ D
Sbjct: 91 DYLRTQRGLFAAETLLGMCLDVCEGMAYLE--EACVIHRDLAARNCLVGENQ-VIKVSDF 147
Query: 159 GLATIMEQANAKSVIGTP---EFMAPELYD-ENYNELADIYSFGMCMLEMVT-FEYPYSE 213
G+ + S GT ++ +PE++ Y+ +D++SFG+ M E+ + + PY E
Sbjct: 148 GMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-E 206
Query: 214 CRNSAQIYKKVSSGIK 229
R+++++ + +S+G +
Sbjct: 207 NRSNSEVVEDISTGFR 222
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 51 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 101
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 68 KDLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPG 125
Query: 102 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
A Q+ G+ YL S IHRDL N+ + + +
Sbjct: 126 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VM 182
Query: 154 KIGDLGLATIMEQAN--AKSVIG--TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 207
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ + E+ T
Sbjct: 183 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 242
Query: 208 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 263
YP ++ K+ KP+ + E+ + C VP SQR + K+L+
Sbjct: 243 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 297
Query: 264 D 264
D
Sbjct: 298 D 298
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 33/184 (17%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 189
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ R ++VSS E
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------EC 236
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVGAFGDRCLMSEG 300
+ I CL + S R + +E+ P++Q D++LP+ A +S G
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQETAEIHLHSLSPG 283
Query: 301 PASV 304
P+ V
Sbjct: 284 PSKV 287
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +IT+L G L Y R
Sbjct: 63 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDN 119
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 120 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 176
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 177 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 221
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +IT+L G L Y R
Sbjct: 64 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDN 120
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 121 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 177
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 222
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +IT+L G L Y R
Sbjct: 67 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDN 123
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 124 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 180
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 181 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 225
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +IT+L G L Y R
Sbjct: 57 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDN 113
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 114 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 170
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +IT+L G L Y R
Sbjct: 64 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDN 120
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 121 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 177
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 222
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 129 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-TIMEQANA----KSVIGTPEFMAPE- 182
SH IIHRD+K NI I+ VK+ D G+A I + N+ +VIGT ++++PE
Sbjct: 132 SHQNGIIHRDVKPANILISATNA-VKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 183 LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG-IKPAALSKVKDPEV 241
++ + +D+YS G + E++T E P++ + Y+ V I P+A + ++
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADL 250
Query: 242 KSFIEKCLV--PASQRLSAKELLMDPFLQVNGTTKNRPLPLPD 282
+ + K L P ++ +A E+ D NG P L D
Sbjct: 251 DAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTD 293
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 129 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-TIMEQANA----KSVIGTPEFMAPE- 182
SH IIHRD+K NI I+ VK+ D G+A I + N+ +VIGT ++++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 183 LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG-IKPAALSKVKDPEV 241
++ + +D+YS G + E++T E P++ + Y+ V I P+A + ++
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADL 250
Query: 242 KSFIEKCLV--PASQRLSAKELLMDPFLQVNGTTKNRPLPLPD 282
+ + K L P ++ +A E+ D NG P L D
Sbjct: 251 DAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTD 293
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +IT+L G L Y R
Sbjct: 91 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDN 147
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 148 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 204
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 205 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 249
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +IT+L G L Y R
Sbjct: 82 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDN 138
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 139 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 195
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 196 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 240
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +IT+L G L Y R
Sbjct: 57 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDN 113
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 114 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 170
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +IT+L G L Y R
Sbjct: 59 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDN 115
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 116 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 172
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 173 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +IT+L G L Y R
Sbjct: 60 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDN 116
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 117 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 173
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 174 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 218
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +IT+L G L Y R
Sbjct: 60 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDN 116
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 117 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 173
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 174 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 218
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXX 112
E+ E ++ H +I++ ++ V II EL T G LR + +
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKFSLDLAS 112
Query: 113 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KS 171
+A Q+ + L YL S +HRD+ N+ ++ N VK+GD GL+ ME + K+
Sbjct: 113 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTXXKA 169
Query: 172 VIGT--PEFMAPELYD-ENYNELADIYSFGMCMLEMV 205
G ++MAPE + + +D++ FG+CM E++
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +IT+L G L Y R
Sbjct: 60 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDN 116
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 117 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 173
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 174 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 218
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +IT+L G L Y R
Sbjct: 51 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDN 107
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 108 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 164
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 165 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 209
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +IT+L G L Y R
Sbjct: 54 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDN 110
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 111 IGSQYLLNWCVQIAEGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 167
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 168 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 212
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +IT+L G L Y R
Sbjct: 57 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGXLLDYVREHKDN 113
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 114 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 170
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW 116
SE ++ H NIIR + + + I+TE +GSL + R G
Sbjct: 99 SEASIMGQFDHPNIIRLEG--VVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGM 156
Query: 117 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA--NAKSVIG 174
R + +G+ YL D +HRDL N+ ++ N K+ D GL+ ++E A + G
Sbjct: 157 LRGVGAGMRYLS--DLGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVLEDDPDAAXTTTG 213
Query: 175 TP---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRN 216
+ APE + ++ +D++SFG+ M E++ + E PY N
Sbjct: 214 GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN 260
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 51 EDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-------- 101
+DL L SE+ ++K + KH NII + Q+ + +I E + G+LR+Y
Sbjct: 116 KDLSDLISEMEMMKMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPG 173
Query: 102 --------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
A Q+ G+ YL S IHRDL N+ + + +
Sbjct: 174 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VM 230
Query: 154 KIGDLGLATIMEQAN--AKSVIG--TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF- 207
KI D GLA + + K+ G ++MAPE L+D Y +D++SFG+ + E+ T
Sbjct: 231 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 290
Query: 208 --EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL--VPASQRLSAKELLM 263
YP ++ K+ KP+ + E+ + C VP SQR + K+L+
Sbjct: 291 GSPYPGVPVEELFKLLKEGHRMDKPSNCTN----ELYMMMRDCWHAVP-SQRPTFKQLVE 345
Query: 264 D 264
D
Sbjct: 346 D 346
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW 116
SE ++ H N+I + ++ V IITE +GSL + R G
Sbjct: 83 SEASIMGQFDHPNVIHLEG--VVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGM 140
Query: 117 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA----KSV 172
R I +G+ YL D +HRDL NI +N N K+ D GL+ +E + S
Sbjct: 141 LRGIAAGMKYLA--DMNYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSA 197
Query: 173 IGTP---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRN 216
+G + APE + + +D++S+G+ M E++++ E PY + N
Sbjct: 198 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 246
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +IT+L G L Y R
Sbjct: 57 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDN 113
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 114 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 170
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 129 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-TIMEQANA----KSVIGTPEFMAPE- 182
SH IIHRD+K NI I+ VK+ D G+A I + N+ +VIGT ++++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 183 LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG-IKPAALSKVKDPEV 241
++ + +D+YS G + E++T E P++ + Y+ V I P+A + ++
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADL 250
Query: 242 KSFIEKCLV--PASQRLSAKELLMDPFLQVNGTTKNRPLPLPD 282
+ + K L P ++ +A E+ D NG P L D
Sbjct: 251 DAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTD 293
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 12/180 (6%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXX 112
+ + E + L H +++FY + + + I+TE ++G L Y R
Sbjct: 48 DEFFQEAQTMMKLSHPKLVKFYG--VCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQ 105
Query: 113 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV 172
+ G+ +L SH IHRDL N ++ + VK+ D G+ + S
Sbjct: 106 LLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVDRDLC-VKVSDFGMTRYVLDDQYVSS 162
Query: 173 IGTP---EFMAPELYDE-NYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSG 227
+GT ++ APE++ Y+ +D+++FG+ M E+ + + PY NS ++ KVS G
Sbjct: 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-EVVLKVSQG 221
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 129 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-TIMEQANA----KSVIGTPEFMAPE- 182
SH IIHRD+K NI I+ VK+ D G+A I + N+ +VIGT ++++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 183 LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG-IKPAALSKVKDPEV 241
++ + +D+YS G + E++T E P++ + Y+ V I P+A + ++
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADL 250
Query: 242 KSFIEKCLV--PASQRLSAKELLMDPFLQVNGTTKNRPLPLPD 282
+ + K L P ++ +A E+ D NG P L D
Sbjct: 251 DAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTD 293
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW 116
SE ++ H NIIR + + + I+TE +GSL + R G
Sbjct: 99 SEASIMGQFDHPNIIRLEG--VVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGM 156
Query: 117 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP 176
R + +G+ YL D +HRDL N+ ++ N K+ D GL+ ++E + T
Sbjct: 157 LRGVGAGMRYLS--DLGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVLEDDPDAAYTTTG 213
Query: 177 -----EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRN 216
+ APE + ++ +D++SFG+ M E++ + E PY N
Sbjct: 214 GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN 260
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXX 112
E+ E ++ H +I++ ++ V II EL T G LR + +
Sbjct: 58 EKFLQEALTMRQFDHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLAS 114
Query: 113 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KS 171
+A Q+ + L YL S +HRD+ N+ ++ N VK+GD GL+ ME + K+
Sbjct: 115 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 171
Query: 172 VIGT--PEFMAPELYD-ENYNELADIYSFGMCMLEMV 205
G ++MAPE + + +D++ FG+CM E++
Sbjct: 172 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXX 112
E+ E ++ H +I++ ++ V II EL T G LR + +
Sbjct: 59 EKFLQEALTMRQFDHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLAS 115
Query: 113 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KS 171
+A Q+ + L YL S +HRD+ N+ ++ N VK+GD GL+ ME + K+
Sbjct: 116 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 172
Query: 172 VIGT--PEFMAPELYD-ENYNELADIYSFGMCMLEMV 205
G ++MAPE + + +D++ FG+CM E++
Sbjct: 173 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXX 112
E+ E ++ H +I++ ++ V II EL T G LR + +
Sbjct: 53 EKFLQEALTMRQFDHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLAS 109
Query: 113 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KS 171
+A Q+ + L YL S +HRD+ N+ ++ N VK+GD GL+ ME + K+
Sbjct: 110 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 166
Query: 172 VIGT--PEFMAPELYD-ENYNELADIYSFGMCMLEMV 205
G ++MAPE + + +D++ FG+CM E++
Sbjct: 167 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXX 112
E+ E ++ H +I++ ++ V II EL T G LR + +
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKFSLDLAS 492
Query: 113 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KS 171
+A Q+ + L YL S +HRD+ N+ ++ N VK+GD GL+ ME + K+
Sbjct: 493 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 549
Query: 172 VIGT--PEFMAPELYD-ENYNELADIYSFGMCMLEMV 205
G ++MAPE + + +D++ FG+CM E++
Sbjct: 550 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 20 VDTSGYKAFDEV-NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSW 78
V+ G F EV G +V + + Q + +E +L+K L+H ++R Y
Sbjct: 26 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV- 84
Query: 79 IDDQNKTVNIITELFTSGSLRQYRXXXX--XXXXXXXXGWARQILSGLIYLHSHDPPIIH 136
+ + IITE +GSL + A QI G+ ++ + IH
Sbjct: 85 --VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIH 140
Query: 137 RDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELYDENYNEL-- 191
RDL+ NI ++ + KI D GLA ++E + A+ P ++ APE NY
Sbjct: 141 RDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI--NYGTFTI 197
Query: 192 -ADIYSFGMCMLEMVTF-EYPYSECRNSAQI 220
+D++SFG+ + E+VT PY N I
Sbjct: 198 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 228
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 20 VDTSGYKAFDEV-NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSW 78
V+ G F EV G +V + + Q + +E +L+K L+H ++R Y
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV- 85
Query: 79 IDDQNKTVNIITELFTSGSLRQYRXXXX--XXXXXXXXGWARQILSGLIYLHSHDPPIIH 136
+ + IITE +GSL + A QI G+ ++ + IH
Sbjct: 86 --VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIH 141
Query: 137 RDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELYDENYNEL-- 191
RDL+ NI ++ + KI D GLA ++E + A+ P ++ APE NY
Sbjct: 142 RDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI--NYGTFTI 198
Query: 192 -ADIYSFGMCMLEMVTF-EYPYSECRNSAQI 220
+D++SFG+ + E+VT PY N I
Sbjct: 199 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 229
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXX 112
E+ E ++ H +I++ ++ V II EL T G LR + +
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLAS 117
Query: 113 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KS 171
+A Q+ + L YL S +HRD+ N+ ++ N VK+GD GL+ ME + K+
Sbjct: 118 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 174
Query: 172 VIGT--PEFMAPELYD-ENYNELADIYSFGMCMLEMV 205
G ++MAPE + + +D++ FG+CM E++
Sbjct: 175 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXX 112
E+ E ++ H +I++ ++ V II EL T G LR + +
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLAS 112
Query: 113 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KS 171
+A Q+ + L YL S +HRD+ N+ ++ N VK+GD GL+ ME + K+
Sbjct: 113 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 169
Query: 172 VIGT--PEFMAPELYD-ENYNELADIYSFGMCMLEMV 205
G ++MAPE + + +D++ FG+CM E++
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 20 VDTSGYKAFDEV-NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSW 78
V+ G F EV G +V + + Q + +E +L+K L+H ++R Y
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV- 82
Query: 79 IDDQNKTVNIITELFTSGSLRQYRXXXX--XXXXXXXXGWARQILSGLIYLHSHDPPIIH 136
+ + IITE +GSL + A QI G+ ++ + IH
Sbjct: 83 --VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIH 138
Query: 137 RDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELYDENYNEL-- 191
RDL+ NI ++ + KI D GLA ++E + A+ P ++ APE NY
Sbjct: 139 RDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI--NYGTFTI 195
Query: 192 -ADIYSFGMCMLEMVTF-EYPYSECRNSAQI 220
+D++SFG+ + E+VT PY N I
Sbjct: 196 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 226
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXX 112
E+ E ++ H +I++ ++ V II EL T G LR + +
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLAS 112
Query: 113 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KS 171
+A Q+ + L YL S +HRD+ N+ ++ N VK+GD GL+ ME + K+
Sbjct: 113 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 169
Query: 172 VIGT--PEFMAPELYD-ENYNELADIYSFGMCMLEMV 205
G ++MAPE + + +D++ FG+CM E++
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXX 112
E+ E ++ H +I++ ++ V II EL T G LR + +
Sbjct: 84 EKFLQEALTMRQFDHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLAS 140
Query: 113 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KS 171
+A Q+ + L YL S +HRD+ N+ ++ N VK+GD GL+ ME + K+
Sbjct: 141 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 197
Query: 172 VIGT--PEFMAPELYD-ENYNELADIYSFGMCMLEMV 205
G ++MAPE + + +D++ FG+CM E++
Sbjct: 198 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 72/172 (41%), Gaps = 31/172 (18%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFT------SGSLRQYRXXXXXXXXX 111
+E++ L+H NI+ F I NK T+L+ GSL Y
Sbjct: 85 AEIYQTVMLRHENILGF----IAADNKDNGTWTQLWLVSDYHEHGSLFDY-LNRYTVTVE 139
Query: 112 XXXGWARQILSGLIYLHSH------DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME 165
A SGL +LH P I HRDLK NI + N G I DLGLA +
Sbjct: 140 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHD 198
Query: 166 QAN------AKSVIGTPEFMAPELYDENYN-------ELADIYSFGMCMLEM 204
A +GT +MAPE+ D++ N + ADIY+ G+ E+
Sbjct: 199 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 20 VDTSGYKAFDEV-NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSW 78
V+ G F EV G +V + + Q + +E +L+K L+H ++R Y
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV- 76
Query: 79 IDDQNKTVNIITELFTSGSLRQYRXXXX--XXXXXXXXGWARQILSGLIYLHSHDPPIIH 136
+ + IITE +GSL + A QI G+ ++ + IH
Sbjct: 77 --VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIH 132
Query: 137 RDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELYDENYNEL-- 191
RDL+ NI ++ + KI D GLA ++E + A+ P ++ APE NY
Sbjct: 133 RDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI--NYGTFTI 189
Query: 192 -ADIYSFGMCMLEMVTF-EYPYSECRNSAQI 220
+D++SFG+ + E+VT PY N I
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 110/277 (39%), Gaps = 58/277 (20%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVN---IITELFTSGSLRQYRXXXXXXXXX 111
R E+ +LK KH NII +N D + N II EL + R
Sbjct: 55 RTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHI 114
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS 171
+ Q L + LH + +IHRDLK N+ IN N ++K+ D GLA I++++ A +
Sbjct: 115 QY--FIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSN-CDLKVCDFGLARIIDESAADN 169
Query: 172 ------------VIGTPEFMAPE--LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNS 217
+ T + APE L Y+ D++S G C+L + P R+
Sbjct: 170 SEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCG-CILAELFLRRPIFPGRDY 228
Query: 218 AQ----IYKKVSSGIKPAALSKVKDPEVKSFIEKC-LVPA-------------------- 252
I+ + + L ++ P + +I+ + PA
Sbjct: 229 RHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQR 288
Query: 253 ------SQRLSAKELLMDPFLQV----NGTTKNRPLP 279
++R++AKE L P+LQ N + P+P
Sbjct: 289 MLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPIP 325
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 72/172 (41%), Gaps = 31/172 (18%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFT------SGSLRQYRXXXXXXXXX 111
+E++ L+H NI+ F I NK T+L+ GSL Y
Sbjct: 47 AEIYQTVMLRHENILGF----IAADNKDNGTWTQLWLVSDYHEHGSLFDY-LNRYTVTVE 101
Query: 112 XXXGWARQILSGLIYLHSH------DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME 165
A SGL +LH P I HRDLK NI + N G I DLGLA +
Sbjct: 102 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHD 160
Query: 166 QAN------AKSVIGTPEFMAPELYDENYN-------ELADIYSFGMCMLEM 204
A +GT +MAPE+ D++ N + ADIY+ G+ E+
Sbjct: 161 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 108/277 (38%), Gaps = 58/277 (20%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVN---IITELFTSGSLRQYRXXXXXXXXX 111
R E+ +LK KH NII +N D + N II EL + R
Sbjct: 55 RTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHI 114
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------- 164
+ Q L + LH + +IHRDLK N+ IN N ++K+ D GLA I+
Sbjct: 115 QY--FIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSN-CDLKVCDFGLARIIDESAADN 169
Query: 165 -----EQANAKSVIGTPEFMAPE--LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNS 217
+Q+ + T + APE L Y+ D++S G C+L + P R+
Sbjct: 170 SEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCG-CILAELFLRRPIFPGRDY 228
Query: 218 AQ----IYKKVSSGIKPAALSKVKDPEVKSFIEKC-LVPA-------------------- 252
I+ + + L ++ P + +I+ + PA
Sbjct: 229 RHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQR 288
Query: 253 ------SQRLSAKELLMDPFLQV----NGTTKNRPLP 279
++R++AKE L P+LQ N + P+P
Sbjct: 289 MLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPIP 325
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 72/172 (41%), Gaps = 31/172 (18%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFT------SGSLRQYRXXXXXXXXX 111
+E++ L+H NI+ F I NK T+L+ GSL Y
Sbjct: 72 AEIYQTVMLRHENILGF----IAADNKDNGTWTQLWLVSDYHEHGSLFDY-LNRYTVTVE 126
Query: 112 XXXGWARQILSGLIYLHSH------DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME 165
A SGL +LH P I HRDLK NI + N G I DLGLA +
Sbjct: 127 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHD 185
Query: 166 QAN------AKSVIGTPEFMAPELYDENYN-------ELADIYSFGMCMLEM 204
A +GT +MAPE+ D++ N + ADIY+ G+ E+
Sbjct: 186 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 45 DVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXX 104
+++ ED++ + +E H+ + ++ + +S +++ +I E G L +
Sbjct: 88 ELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI-EYVNGGDLMFHMQR 146
Query: 105 XXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-- 162
++ +I L YLH II+RDLK DN+ ++ ++G +K+ D G+
Sbjct: 147 QRKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLD-SEGHIKLTDYGMCKEG 203
Query: 163 IMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPY 211
+ + GTP ++APE L E+Y D ++ G+ M EM+ P+
Sbjct: 204 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 88/185 (47%), Gaps = 13/185 (7%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDD---QN 83
A D+ +G +VA ++ QS +R Y E+ LLK ++H N+I + + +N
Sbjct: 43 AIDKRSGEKVA--IKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN 100
Query: 84 KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDN 143
+ F L++ + Q+L GL Y+HS ++HRDLK N
Sbjct: 101 FYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVY--QMLKGLKYIHSAG--VVHRDLKPGN 156
Query: 144 IFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE--LYDENYNELADIYSFGMCM 201
+ +N + E+KI D GLA + A + T + APE L +YN+ DI+S G M
Sbjct: 157 LAVNED-CELKILDFGLARHAD-AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIM 214
Query: 202 LEMVT 206
EM+T
Sbjct: 215 AEMLT 219
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 15/227 (6%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDD---QN 83
A D+ +G +VA ++ QS +R Y E+ LLK ++H N+I + + +N
Sbjct: 61 AIDKRSGEKVAIK--KLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN 118
Query: 84 KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDN 143
+ F L++ + Q+L GL Y+HS ++HRDLK N
Sbjct: 119 FYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVY--QMLKGLKYIHSAG--VVHRDLKPGN 174
Query: 144 IFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE--LYDENYNELADIYSFGMCM 201
+ +N + E+KI D GLA + A + T + APE L +YN+ DI+S G M
Sbjct: 175 LAVNED-CELKILDFGLARHAD-AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIM 232
Query: 202 LEMVTFEYPYSECRNSAQIYK--KVSSGIKPAALSKVKDPEVKSFIE 246
EM+T + + Q+ + KV+ + K+ D KS+I+
Sbjct: 233 AEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQ 279
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 117
E ++ L H +++ Y ++ + ++ E G L Y R G
Sbjct: 72 EAEVMMKLSHPKLVQLYGVCLE--QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 129
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP- 176
+ G+ YL + +IHRDL N + NQ +K+ D G+ + S GT
Sbjct: 130 LDVCEGMAYLE--EACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTKF 186
Query: 177 --EFMAPELYD-ENYNELADIYSFGMCMLEMVT-FEYPYSECRNSAQIYKKVSSGIK 229
++ +PE++ Y+ +D++SFG+ M E+ + + PY E R+++++ + +S+G +
Sbjct: 187 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFR 242
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 20 VDTSGYKAFDEV-NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSW 78
V+ G F EV G +V + + Q + +E +L+K L+H ++R Y
Sbjct: 20 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV- 78
Query: 79 IDDQNKTVNIITELFTSGSLRQYRXXXX--XXXXXXXXGWARQILSGLIYLHSHDPPIIH 136
+ + IITE +GSL + A QI G+ ++ + IH
Sbjct: 79 --VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIH 134
Query: 137 RDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELYDENYNEL-- 191
RDL+ NI ++ + KI D GLA ++E + A+ P ++ APE NY
Sbjct: 135 RDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI--NYGTFTI 191
Query: 192 -ADIYSFGMCMLEMVTF-EYPYSECRNSAQI 220
+D++SFG+ + E+VT PY N I
Sbjct: 192 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 222
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 108/277 (38%), Gaps = 58/277 (20%)
Query: 55 RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVN---IITELFTSGSLRQYRXXXXXXXXX 111
R E+ +LK KH NII +N D + N II EL + R
Sbjct: 55 RTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHI 114
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM------- 164
+ Q L + LH + +IHRDLK N+ IN N ++K+ D GLA I+
Sbjct: 115 QY--FIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSN-CDLKVCDFGLARIIDESAADN 169
Query: 165 -----EQANAKSVIGTPEFMAPE--LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNS 217
+Q+ + T + APE L Y+ D++S G C+L + P R+
Sbjct: 170 SEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCG-CILAELFLRRPIFPGRDY 228
Query: 218 AQ----IYKKVSSGIKPAALSKVKDPEVKSFIEKC-LVPA-------------------- 252
I+ + + L ++ P + +I+ + PA
Sbjct: 229 RHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQR 288
Query: 253 ------SQRLSAKELLMDPFLQV----NGTTKNRPLP 279
++R++AKE L P+LQ N + P+P
Sbjct: 289 MLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPIP 325
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 72/172 (41%), Gaps = 31/172 (18%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFT------SGSLRQYRXXXXXXXXX 111
+E++ L+H NI+ F I NK T+L+ GSL Y
Sbjct: 52 AEIYQTVMLRHENILGF----IAADNKDNGTWTQLWLVSDYHEHGSLFDY-LNRYTVTVE 106
Query: 112 XXXGWARQILSGLIYLHSH------DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME 165
A SGL +LH P I HRDLK NI + N G I DLGLA +
Sbjct: 107 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHD 165
Query: 166 QAN------AKSVIGTPEFMAPELYDENYN-------ELADIYSFGMCMLEM 204
A +GT +MAPE+ D++ N + ADIY+ G+ E+
Sbjct: 166 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 72/172 (41%), Gaps = 31/172 (18%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFT------SGSLRQYRXXXXXXXXX 111
+E++ L+H NI+ F I NK T+L+ GSL Y
Sbjct: 46 AEIYQTVMLRHENILGF----IAADNKDNGTWTQLWLVSDYHEHGSLFDY-LNRYTVTVE 100
Query: 112 XXXGWARQILSGLIYLHSH------DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME 165
A SGL +LH P I HRDLK NI + N G I DLGLA +
Sbjct: 101 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHD 159
Query: 166 QAN------AKSVIGTPEFMAPELYDENYN-------ELADIYSFGMCMLEM 204
A +GT +MAPE+ D++ N + ADIY+ G+ E+
Sbjct: 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 20 VDTSGYKAFDEV-NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSW 78
V+ G F EV G +V + + Q + +E +L+K L+H ++R Y
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV- 86
Query: 79 IDDQNKTVNIITELFTSGSLRQYRXXXX--XXXXXXXXGWARQILSGLIYLHSHDPPIIH 136
+ + IITE +GSL + A QI G+ ++ + IH
Sbjct: 87 --VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIH 142
Query: 137 RDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELYDENYNEL-- 191
RDL+ NI ++ + KI D GLA ++E + A+ P ++ APE NY
Sbjct: 143 RDLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI--NYGTFTI 199
Query: 192 -ADIYSFGMCMLEMVTF-EYPYSECRNSAQI 220
+D++SFG+ + E+VT PY N I
Sbjct: 200 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 230
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + ++ + V I+ EL + + +
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ 120
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 121 MELDHERMSYLL---YQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA- 173
Query: 163 IMEQANAKSVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRN 216
+ S + PE + APE + Y E DI+S G M EMV + + R+
Sbjct: 174 ---RTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPG-RD 229
Query: 217 SAQIYKKVSSGIK---PAALSKVKDPEVKSFIE 246
+ KV + PA + K++ P V++++E
Sbjct: 230 YIDQWNKVIEQLGTPCPAFMKKLQ-PTVRNYVE 261
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 95/227 (41%), Gaps = 15/227 (6%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN--- 83
AFD V G+ VA ++ Q+ +R Y E+ LLK + H NII N + +
Sbjct: 43 AFDTVLGINVA--VKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEE 100
Query: 84 -KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
+ V ++ EL + + Q+L G+ +LHS IIHRDLK
Sbjct: 101 FQDVYLVMELMDANLCQVIHMELDHERMSYLL---YQMLCGIKHLHSAG--IIHRDLKPS 155
Query: 143 NIFINGNQGEVKIGDLGLA-TIMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMC 200
NI + + +KI D GLA T + T + APE + Y DI+S G
Sbjct: 156 NIVVKSD-CTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCI 214
Query: 201 MLEMVTFEYPYSECRNSAQIYKKVSS-GIKPAALSKVKDPEVKSFIE 246
M E+V + + Q K + G A P V++++E
Sbjct: 215 MGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVE 261
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 72/172 (41%), Gaps = 31/172 (18%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFT------SGSLRQYRXXXXXXXXX 111
+E++ L+H NI+ F I NK T+L+ GSL Y
Sbjct: 49 AEIYQTVMLRHENILGF----IAADNKDNGTWTQLWLVSDYHEHGSLFDY-LNRYTVTVE 103
Query: 112 XXXGWARQILSGLIYLHSH------DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME 165
A SGL +LH P I HRDLK NI + N G I DLGLA +
Sbjct: 104 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHD 162
Query: 166 QAN------AKSVIGTPEFMAPELYDENYN-------ELADIYSFGMCMLEM 204
A +GT +MAPE+ D++ N + ADIY+ G+ E+
Sbjct: 163 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 20 VDTSGYKAFDEV-NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSW 78
V+ G F EV G +V + + Q + +E +L+K L+H ++R Y
Sbjct: 19 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV- 77
Query: 79 IDDQNKTVNIITELFTSGSLRQYRXXXX--XXXXXXXXGWARQILSGLIYLHSHDPPIIH 136
+ + IITE +GSL + A QI G+ ++ + IH
Sbjct: 78 --VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIH 133
Query: 137 RDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELYDENYNEL-- 191
RDL+ NI ++ + KI D GLA ++E + A+ P ++ APE NY
Sbjct: 134 RDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI--NYGTFTI 190
Query: 192 -ADIYSFGMCMLEMVTF-EYPYSECRNSAQI 220
+D++SFG+ + E+VT PY N I
Sbjct: 191 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 221
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 59/100 (59%), Gaps = 10/100 (10%)
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQ--GEVKIGDLGLA-TIMEQANAKSVIG 174
+QIL G+ YLH ++ I+H DLK NI ++ G++KI D G++ I + ++G
Sbjct: 138 KQILEGVYYLHQNN--IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMG 195
Query: 175 TPEFMAPELYDENYNEL---ADIYSFGMCMLEMVTFEYPY 211
TPE++APE+ NY+ + D+++ G+ ++T P+
Sbjct: 196 TPEYLAPEIL--NYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 33/182 (18%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 189
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ R ++VSS E
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------EC 236
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVGAFGDRCLMSEG 300
+ I CL + S R + +E+ P++Q D++LP+ A +S G
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQETAEIHLHSLSPG 283
Query: 301 PA 302
P+
Sbjct: 284 PS 285
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 20 VDTSGYKAFDEV-NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSW 78
V+ G F EV G +V + + Q + +E +L+K L+H ++R Y
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV- 76
Query: 79 IDDQNKTVNIITELFTSGSLRQYRXXXX--XXXXXXXXGWARQILSGLIYLHSHDPPIIH 136
+ + IITE +GSL + A QI G+ ++ + IH
Sbjct: 77 --VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIH 132
Query: 137 RDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELYDENYNEL-- 191
RDL+ NI ++ + KI D GLA ++E + A+ P ++ APE NY
Sbjct: 133 RDLRAANILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI--NYGTFTI 189
Query: 192 -ADIYSFGMCMLEMVTF-EYPYSECRNSAQI 220
+D++SFG+ + E+VT PY N I
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 20/148 (13%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 184
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ R ++VSS E
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------EC 231
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQ 268
+ I CL + S R + +E+ P++Q
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D VN + VA ++ + +R E+ +L + +H NII N I +Q
Sbjct: 44 AYDNVNKVRVA---IKKISPFEHQTYCQRTLREIKILLAFRHENIIGI-NDIIRAPTIEQ 99
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V I+ +L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 100 MKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 155
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 156 NLLLN-TTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 214
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 215 SVGCILAEMLS 225
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 33/182 (18%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 203
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ R ++VSS E
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------EC 250
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVGAFGDRCLMSEG 300
+ I CL + S R + +E+ P++Q D++LP+ A +S G
Sbjct: 251 QHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQETAEIHLHSLSPG 297
Query: 301 PA 302
P+
Sbjct: 298 PS 299
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 20/148 (13%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 128 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 187
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ R ++VSS E
Sbjct: 188 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------EC 234
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQ 268
+ I CL + S R + +E+ P++Q
Sbjct: 235 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 262
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 33/182 (18%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 231
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ R ++VSS E
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------EC 278
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVGAFGDRCLMSEG 300
+ I CL + S R + +E+ P++Q D++LP+ A +S G
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQETAEIHLHSLSPG 325
Query: 301 PA 302
P+
Sbjct: 326 PS 327
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 36 VAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFT 94
VA +VR+DD + P R E+ LLK LKH NI+R ++ + +K + ++ E
Sbjct: 30 VALKRVRLDDDDEGVPSSALR---EICLLKELKHKNIVRLHD--VLHSDKKLTLVFEFCD 84
Query: 95 SGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVK 154
+ + + Q+L GL + HS + ++HRDLK N+ IN N GE+K
Sbjct: 85 QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN--VLHRDLKPQNLLINRN-GELK 141
Query: 155 IGDLGLA 161
+ D GLA
Sbjct: 142 LADFGLA 148
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 13/118 (11%)
Query: 119 QILSGLIYL---HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM---EQANAKSV 172
QI G I L H H II+RD+K +NI ++ N G V + D GL+ E A
Sbjct: 162 QIYVGEIVLALEHLHKLGIIYRDIKLENILLDSN-GHVVLTDFGLSKEFVADETERAYDF 220
Query: 173 IGTPEFMAPELY---DENYNELADIYSFGMCMLEMVTFEYPYS---ECRNSAQIYKKV 224
GT E+MAP++ D +++ D +S G+ M E++T P++ E + A+I +++
Sbjct: 221 CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI 278
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 33/182 (18%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 189
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ R ++VSS E
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------EC 236
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVGAFGDRCLMSEG 300
+ I CL + S R + +E+ P++Q D++LP+ A +S G
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQETAEIHLHSLSPG 283
Query: 301 PA 302
P+
Sbjct: 284 PS 285
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 33/182 (18%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 204
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ R ++VSS E
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------EC 251
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVGAFGDRCLMSEG 300
+ I CL + S R + +E+ P++Q D++LP+ A +S G
Sbjct: 252 QHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQETAEIHLHSLSPG 298
Query: 301 PA 302
P+
Sbjct: 299 PS 300
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 33/182 (18%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 216
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ R ++VSS E
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------EC 263
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVGAFGDRCLMSEG 300
+ I CL + S R + +E+ P++Q D++LP+ A +S G
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQETAEIHLHSLSPG 310
Query: 301 PA 302
P+
Sbjct: 311 PS 312
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 20 VDTSGYKAFDEV-NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSW 78
V+ G F EV G +V + + Q + +E +L+K L+H ++R Y
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV- 82
Query: 79 IDDQNKTVNIITELFTSGSLRQYRXXXX--XXXXXXXXGWARQILSGLIYLHSHDPPIIH 136
+ + IITE +GSL + A QI G+ ++ + IH
Sbjct: 83 --VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIH 138
Query: 137 RDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELYDENYNEL-- 191
RDL+ NI ++ + KI D GLA ++E + A+ P ++ APE NY
Sbjct: 139 RDLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI--NYGTFTI 195
Query: 192 -ADIYSFGMCMLEMVTF-EYPYSECRNSAQI 220
+D++SFG+ + E+VT PY N I
Sbjct: 196 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 226
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 20 VDTSGYKAFDEV-NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSW 78
V+ G F EV G +V + + Q + +E +L+K L+H ++R Y
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV- 81
Query: 79 IDDQNKTVNIITELFTSGSLRQYRXXXX--XXXXXXXXGWARQILSGLIYLHSHDPPIIH 136
+ + IITE +GSL + A QI G+ ++ + IH
Sbjct: 82 --VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIH 137
Query: 137 RDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELYDENYNEL-- 191
RDL+ NI ++ + KI D GLA ++E + A+ P ++ APE NY
Sbjct: 138 RDLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI--NYGTFTI 194
Query: 192 -ADIYSFGMCMLEMVTF-EYPYSECRNSAQI 220
+D++SFG+ + E+VT PY N I
Sbjct: 195 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 225
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 20/148 (13%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 164 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 223
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ R ++VSS E
Sbjct: 224 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------EC 270
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQ 268
+ I CL + S R + +E+ P++Q
Sbjct: 271 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 298
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 33/182 (18%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 231
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ R ++VSS E
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------EC 278
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVGAFGDRCLMSEG 300
+ I CL + S R + +E+ P++Q D++LP+ A +S G
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQETAEIHLHSLSPG 325
Query: 301 PA 302
P+
Sbjct: 326 PS 327
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 77/169 (45%), Gaps = 20/169 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + ++ + V I+ EL + + +
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ 120
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 121 MELDHERMSYL---LYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA- 173
Query: 163 IMEQANAKSVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMV 205
+ S + TPE + APE + Y E DI+S G M EM+
Sbjct: 174 ---RTAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 117/289 (40%), Gaps = 32/289 (11%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERL-YSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA D+ VA ++++ ++ + + R E+ LL+ L H NII +++ N
Sbjct: 27 YKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86
Query: 84 KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDN 143
++++ + + + + L GL YLH H I+HRDLK +N
Sbjct: 87 --ISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW--ILHRDLKPNN 142
Query: 144 IFINGNQGEVKIGDLGLATIMEQANAKSV--IGTPEFMAPELY--DENYNELADIYSFGM 199
+ ++ N G +K+ D GLA N + T + APEL Y D+++ G
Sbjct: 143 LLLDEN-GVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVG- 200
Query: 200 CMLEMVTFEYPY----SECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVPASQR 255
C+L + P+ S+ +I++ + + + P+ +F +P
Sbjct: 201 CILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHI 260
Query: 256 LSAKE----------LLMDPFLQVNGTTK-------NRPLPLPDIVLPR 287
SA L +P ++ T NRP P P LPR
Sbjct: 261 FSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPR 309
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 85/171 (49%), Gaps = 9/171 (5%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA 117
+E+ +L+ +KH NI+ + I + + ++ +L + G L
Sbjct: 69 NEIAVLRKIKHENIVALED--IYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLI 126
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNI--FINGNQGEVKIGDLGLATIMEQANAKS-VIG 174
RQ+L + YLH I+HRDLK +N+ + + ++ I D GL+ + + + S G
Sbjct: 127 RQVLDAVYYLHRMG--IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACG 184
Query: 175 TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 224
TP ++APE L + Y++ D +S G+ ++ P+ + N +++++++
Sbjct: 185 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD-ENDSKLFEQI 234
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 12/189 (6%)
Query: 26 KAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT 85
K D + ++V ++ DD ED++ + +E H+ + ++ + +S +++
Sbjct: 42 KKTDRIYAMKVVKKELVNDD-----EDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL 96
Query: 86 VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIF 145
+I E G L + ++ +I L YLH II+RDLK DN+
Sbjct: 97 FFVI-EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVL 153
Query: 146 INGNQGEVKIGDLGLAT--IMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCML 202
++ ++G +K+ D G+ + GTP ++APE L E+Y D ++ G+ M
Sbjct: 154 LD-SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 212
Query: 203 EMVTFEYPY 211
EM+ P+
Sbjct: 213 EMMAGRSPF 221
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 78/152 (51%), Gaps = 10/152 (6%)
Query: 129 SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA-TIMEQANA----KSVIGTPEFMAPE- 182
SH IIHRD+K NI I+ VK+ D G+A I + N+ +VIGT ++++PE
Sbjct: 149 SHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 207
Query: 183 LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG-IKPAALSKVKDPEV 241
++ + +D+YS G + E++T E P++ + Y+ V I P+A + ++
Sbjct: 208 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADL 267
Query: 242 KSFIEKCLV--PASQRLSAKELLMDPFLQVNG 271
+ + K L P ++ +A E+ D NG
Sbjct: 268 DAVVLKALAKNPENRYQTAAEMRADLVRVHNG 299
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 20 VDTSGYKAFDEV-NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSW 78
V+ G F EV G +V + + Q + +E +L+K L+H ++R Y
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV- 71
Query: 79 IDDQNKTVNIITELFTSGSLRQYRXX--XXXXXXXXXXGWARQILSGLIYLHSHDPPIIH 136
+ + IITE +GSL + A QI G+ ++ + IH
Sbjct: 72 --VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIH 127
Query: 137 RDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELYDENYNEL-- 191
RDL+ NI ++ + KI D GLA ++E + A+ P ++ APE NY
Sbjct: 128 RDLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI--NYGTFTI 184
Query: 192 -ADIYSFGMCMLEMVTF-EYPYSECRNSAQI 220
+D++SFG+ + E+VT PY N I
Sbjct: 185 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 215
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPE 177
+ +L+ Y+H ++ I HRD+K NI ++ N G VK+ D G + M K GT E
Sbjct: 158 KSVLNSFSYIH-NEKNICHRDVKPSNILMDKN-GRVKLSDFGESEYMVDKKIKGSRGTYE 215
Query: 178 FMAPELY--DENYN-ELADIYSFGMCMLEMVTFEYPYS 212
FM PE + + +YN DI+S G+C+ M P+S
Sbjct: 216 FMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS 253
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +I +L G L Y R
Sbjct: 61 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDN 117
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 118 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 174
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 175 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 219
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D VN + VA ++ + +R E+ +L +H NII N I +Q
Sbjct: 62 AYDNVNKVRVAIKKI---SPFEHQTYCQRTLREIKILLRFRHENIIGI-NDIIRAPTIEQ 117
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V ++T L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 118 MKDVYLVTHLMGADLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 173
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 174 NLLLNTTX-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 232
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 233 SVGCILAEMLS 243
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 20 VDTSGYKAFDEV-NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSW 78
V+ G F EV G +V + + Q + +E +L+K L+H ++R Y
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV- 76
Query: 79 IDDQNKTVNIITELFTSGSLRQYRXXXX--XXXXXXXXGWARQILSGLIYLHSHDPPIIH 136
+ + IITE +GSL + A QI G+ ++ + IH
Sbjct: 77 --VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIH 132
Query: 137 RDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELYDENYNEL-- 191
RDL+ NI ++ + KI D GLA ++E + A+ P ++ APE NY
Sbjct: 133 RDLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI--NYGTFTI 189
Query: 192 -ADIYSFGMCMLEMVTF-EYPYSECRNSAQI 220
+D++SFG+ + E+VT PY N I
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 105/241 (43%), Gaps = 33/241 (13%)
Query: 44 DDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-- 101
D L + +D +R E LL +L+H +I++FY + + ++ E G L ++
Sbjct: 55 DPTLAARKDFQR---EAELLTNLQHEHIVKFYG--VCGDGDPLIMVFEYMKHGDLNKFLR 109
Query: 102 --------------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFIN 147
R A QI SG++YL S +HRDL N +
Sbjct: 110 AHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH--FVHRDLATRNCLVG 167
Query: 148 GNQGEVKIGDLGLATIMEQANAKSVIGTP----EFMAPE-LYDENYNELADIYSFGMCML 202
N VKIGD G++ + + V G +M PE + + +D++SFG+ +
Sbjct: 168 ANL-LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILW 226
Query: 203 EMVTF-EYPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLV-PASQRLSAKE 260
E+ T+ + P+ + N+ ++ + ++ G + +V EV + C QRL+ KE
Sbjct: 227 EIFTYGKQPWFQLSNT-EVIECITQG-RVLERPRVCPKEVYDVMLGCWQREPQQRLNIKE 284
Query: 261 L 261
+
Sbjct: 285 I 285
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +I +L G L Y R
Sbjct: 58 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDN 114
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 115 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 171
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 172 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 216
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D VN + VA ++ + +R E+ +L + +H NII N I +Q
Sbjct: 44 AYDNVNKVRVA---IKKISPFEHQTYCQRTLREIKILLAFRHENIIGI-NDIIRAPTIEQ 99
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V I+ +L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 100 MKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 155
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 156 NLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 214
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 215 SVGCILAEMLS 225
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 17/172 (9%)
Query: 53 LERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX- 111
+E +E +++K+L+H+ +++ + + + IITE GSL +
Sbjct: 221 VEAFLAEANVMKTLQHDKLVKLHAV---VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL 277
Query: 112 -XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK 170
++ QI G+ ++ + IHRDL+ NI ++ + KI D GLA + AK
Sbjct: 278 PKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASL-VCKIADFGLARV----GAK 330
Query: 171 SVIGTPEFMAPELYD-ENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQI 220
I ++ APE + ++ +D++SFG+ ++E+VT+ PY N I
Sbjct: 331 FPI---KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 379
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 12/189 (6%)
Query: 26 KAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT 85
K D + ++V ++ DD ED++ + +E H+ + ++ + +S +++
Sbjct: 27 KKTDRIYAMKVVKKELVNDD-----EDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL 81
Query: 86 VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIF 145
+I E G L + ++ +I L YLH II+RDLK DN+
Sbjct: 82 FFVI-EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVL 138
Query: 146 INGNQGEVKIGDLGLAT--IMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCML 202
++ ++G +K+ D G+ + GTP ++APE L E+Y D ++ G+ M
Sbjct: 139 LD-SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 197
Query: 203 EMVTFEYPY 211
EM+ P+
Sbjct: 198 EMMAGRSPF 206
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +I +L G L Y R
Sbjct: 59 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDN 115
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 116 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 172
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 173 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXX 112
E+ SE ++K+L H +I++ I ++ T II EL+ G L Y
Sbjct: 70 EKFMSEAVIMKNLDHPHIVKLIG--IIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLT 126
Query: 113 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN--AK 170
++ QI + YL S + +HRD+ NI + + VK+GD GL+ +E +
Sbjct: 127 LVLYSLQICKAMAYLESIN--CVHRDIAVRNILVASPEC-VKLGDFGLSRYIEDEDYYKA 183
Query: 171 SVIGTP-EFMAPELYD-ENYNELADIYSFGMCMLEMVTF 207
SV P ++M+PE + + +D++ F +CM E+++F
Sbjct: 184 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSF 222
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +I +L G L Y R
Sbjct: 64 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDN 120
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 121 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 177
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 222
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +I +L G L Y R
Sbjct: 58 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLIMQLMPFGXLLDYVREHKDN 114
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 115 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 171
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 172 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 216
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 12/189 (6%)
Query: 26 KAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKT 85
K D + ++V ++ DD ED++ + +E H+ + ++ + +S +++
Sbjct: 31 KKTDRIYAMKVVKKELVNDD-----EDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL 85
Query: 86 VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIF 145
+I E G L + ++ +I L YLH II+RDLK DN+
Sbjct: 86 FFVI-EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVL 142
Query: 146 INGNQGEVKIGDLGLAT--IMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCML 202
++ ++G +K+ D G+ + GTP ++APE L E+Y D ++ G+ M
Sbjct: 143 LD-SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 201
Query: 203 EMVTFEYPY 211
EM+ P+
Sbjct: 202 EMMAGRSPF 210
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +I +L G L Y R
Sbjct: 60 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDN 116
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 117 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 173
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 174 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 218
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX-- 111
E E ++K L+H +++ Y + + I+TE + GSL +
Sbjct: 48 EAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLP 104
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANA 169
A QI SG+ Y+ + +HRDL+ NI + G K+ D GLA ++E + A
Sbjct: 105 QLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEXTA 161
Query: 170 KSVIGTP-EFMAPE--LYDENYNELADIYSFGMCMLEMVT 206
+ P ++ APE LY + +D++SFG+ + E+ T
Sbjct: 162 RQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTT 200
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 117
E ++ H N++ + + K V I+ E +G+L + R G
Sbjct: 94 EASIMGQFDHPNVVHLEG--VVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGML 151
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP- 176
R I +G+ YL D +HRDL NI +N N K+ D GL+ ++E + ++V T
Sbjct: 152 RGIAAGMRYLA--DMGYVHRDLAARNILVNSNL-VCKVSDFGLSRVIED-DPEAVYTTTG 207
Query: 177 -----EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ APE + + +D++S+G+ M E++++ E PY + N + K + G +
Sbjct: 208 GKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVIKAIEEGYR 266
Query: 230 -PAAL 233
PA +
Sbjct: 267 LPAPM 271
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +I +L G L Y R
Sbjct: 57 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDN 113
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D GLA ++
Sbjct: 114 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE 170
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXX 112
E+ E ++ H +I++ ++ V II EL T G LR + +
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKFSLDLAS 492
Query: 113 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KS 171
+A Q+ + L YL S +HRD+ N+ ++ VK+GD GL+ ME + K+
Sbjct: 493 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSATDC-VKLGDFGLSRYMEDSTYYKA 549
Query: 172 VIGT--PEFMAPELYD-ENYNELADIYSFGMCMLEMV 205
G ++MAPE + + +D++ FG+CM E++
Sbjct: 550 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXX 112
E+ E ++ H +I++ ++ V II EL T G LR + +
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKFSLDLAS 112
Query: 113 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-KS 171
+A Q+ + L YL S +HRD+ N+ ++ VK+GD GL+ ME + K+
Sbjct: 113 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSATDC-VKLGDFGLSRYMEDSTYYKA 169
Query: 172 VIGT--PEFMAPELYD-ENYNELADIYSFGMCMLEMV 205
G ++MAPE + + +D++ FG+CM E++
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 23/168 (13%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNI--ITELFTSGSLRQYRXXXXXXXXXXXXG 115
+E++ L+H+NI+ F S + +N + + IT GSL +
Sbjct: 51 TEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRL 110
Query: 116 WARQILSGLIYLHSH------DPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN- 168
A GL +LH P I HRD K N+ + N + I DLGLA + Q +
Sbjct: 111 -AVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNL-QCCIADLGLAVMHSQGSD 168
Query: 169 -----AKSVIGTPEFMAPELYDENYN-------ELADIYSFGMCMLEM 204
+GT +MAPE+ DE + DI++FG+ + E+
Sbjct: 169 YLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX-- 111
E E ++K L+H +++ Y ++ + I+TE + GSL +
Sbjct: 307 EAFLQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGETGKYLRLP 363
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANA 169
A QI SG+ Y+ + +HRDL+ NI + G K+ D GLA ++E + A
Sbjct: 364 QLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTA 420
Query: 170 KSVIGTP-EFMAPE--LYDENYNELADIYSFGMCMLEMVT 206
+ P ++ APE LY + +D++SFG+ + E+ T
Sbjct: 421 RQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTT 459
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXX 112
E+ SE ++K+L H +I++ I ++ T II EL+ G L Y
Sbjct: 58 EKFMSEAVIMKNLDHPHIVKLIG--IIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLT 114
Query: 113 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN--AK 170
++ QI + YL S + +HRD+ NI + + VK+GD GL+ +E +
Sbjct: 115 LVLYSLQICKAMAYLESIN--CVHRDIAVRNILVASPEC-VKLGDFGLSRYIEDEDYYKA 171
Query: 171 SVIGTP-EFMAPELYD-ENYNELADIYSFGMCMLEMVTF 207
SV P ++M+PE + + +D++ F +CM E+++F
Sbjct: 172 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSF 210
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXX 112
E+ SE ++K+L H +I++ I ++ T II EL+ G L Y
Sbjct: 54 EKFMSEAVIMKNLDHPHIVKLIG--IIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLT 110
Query: 113 XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN--AK 170
++ QI + YL S + +HRD+ NI + + VK+GD GL+ +E +
Sbjct: 111 LVLYSLQICKAMAYLESIN--CVHRDIAVRNILVASPEC-VKLGDFGLSRYIEDEDYYKA 167
Query: 171 SVIGTP-EFMAPELYD-ENYNELADIYSFGMCMLEMVTF 207
SV P ++M+PE + + +D++ F +CM E+++F
Sbjct: 168 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSF 206
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +IT+L G L Y R
Sbjct: 59 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDN 115
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D G A ++
Sbjct: 116 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAE 172
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 173 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +IT+L G L Y R
Sbjct: 64 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDN 120
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D G A ++
Sbjct: 121 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAE 177
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 222
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D VN + VA ++ + +R E+ +L +H NII N I +Q
Sbjct: 62 AYDNVNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDIIRAPTIEQ 117
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V I+ +L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 118 MKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 173
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 174 NLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 232
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 233 SVGCILAEMLS 243
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D +N + VA +R + +R E+ +L +H NII N I +Q
Sbjct: 46 AYDNLNKVRVA---IRKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDIIRAPTIEQ 101
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V I+ +L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 102 MKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 157
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 158 NLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 216
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 217 SVGCILAEMLS 227
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 26/170 (15%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNI----ITELFTSGSLRQYRXXXXXXXXXXXX 114
EV+ L +KH NI++F + + + +V++ IT GSL +
Sbjct: 68 EVYSLPGMKHENILQFIGA--EKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCH 125
Query: 115 GWARQILSGLIYLH--------SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME- 165
A + GL YLH H P I HRD+K N+ + N I D GLA E
Sbjct: 126 I-AETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC-IADFGLALKFEA 183
Query: 166 ---QANAKSVIGTPEFMAPELYDE--NYNELA----DIYSFGMCMLEMVT 206
+ +GT +MAPE+ + N+ A D+Y+ G+ + E+ +
Sbjct: 184 GKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D VN + VA ++ + +R E+ +L +H NII N I +Q
Sbjct: 42 AYDNVNKVRVAIKKI---SPFEHQTYCQRTLREIKILLRFRHENIIGI-NDIIRAPTIEQ 97
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V I+ +L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 98 MKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 153
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 154 NLLLNTTX-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 212
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 213 SVGCILAEMLS 223
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +IT+L G L Y R
Sbjct: 57 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLITQLMPFGCLLDYVREHKDN 113
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D G A ++
Sbjct: 114 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAE 170
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D VN + VA ++ + +R E+ +L +H NII N I +Q
Sbjct: 42 AYDNVNKVRVAIKKI---SPFEHQTYCQRTLREIKILLRFRHENIIGI-NDIIRAPTIEQ 97
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V I+ +L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 98 MKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 153
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 154 NLLLNTTX-DLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 212
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 213 SVGCILAEMLS 223
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 20/148 (13%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 125 HCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 184
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ R ++VS E
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSX-------------EC 231
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQ 268
+ I CL + S R + +E+ P++Q
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 21/112 (18%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ-------ANAKS 171
Q + ++H PPIIHRDLK +N+ ++ NQG +K+ D G AT + A ++
Sbjct: 144 QTCRAVQHMHRQKPPIIHRDLKVENLLLS-NQGTIKLCDFGSATTISHYPDYSWSAQRRA 202
Query: 172 VI-------GTPEFMAPELYDENYN----ELADIYSFGMCMLEMVTF-EYPY 211
++ TP + PE+ D N E DI++ G C+L ++ F ++P+
Sbjct: 203 LVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALG-CILYLLCFRQHPF 253
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D VN + VA ++ + +R E+ +L +H NII N I +Q
Sbjct: 42 AYDNVNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDIIRAPTIEQ 97
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V I+ +L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 98 MKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 153
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 154 NLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 212
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 213 SVGCILAEMLS 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D VN + VA ++ + +R E+ +L +H NII N I +Q
Sbjct: 50 AYDNVNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDIIRAPTIEQ 105
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V I+ +L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 106 MKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 161
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 162 NLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 220
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 221 SVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D VN + VA ++ + +R E+ +L +H NII N I +Q
Sbjct: 42 AYDNVNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDIIRAPTIEQ 97
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V I+ +L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 98 MKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 153
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 154 NLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 212
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 213 SVGCILAEMLS 223
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D VN + VA ++ + +R E+ +L +H NII N I +Q
Sbjct: 42 AYDNVNKVRVAIKKI---SPFEHQTYCQRTLREIKILLRFRHENIIGI-NDIIRAPTIEQ 97
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V I+ +L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 98 MKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 153
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 154 NLLLNTTX-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 212
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 213 SVGCILAEMLS 223
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 21/211 (9%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + ++ + V I+ EL +L Q
Sbjct: 61 FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI 119
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
+ Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 120 QMELDHERMSYLLY--QMLVGIKHLHSAG--IIHRDLKPSNIVVKSD-ATLKILDFGLA- 173
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRN 216
+ S + TP + APE + Y E DI+S G+ M EM+ + +
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDH 230
Query: 217 SAQIYKKVSS-GIKPAALSKVKDPEVKSFIE 246
Q K + G K P V++++E
Sbjct: 231 IDQWNKVIEQLGTPSPEFMKKLQPTVRTYVE 261
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 98/246 (39%), Gaps = 38/246 (15%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 118
E+ LLK L+H N++ + + K ++ E L +
Sbjct: 74 EIKLLKQLRHENLVNLLE--VCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLF 131
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA--KSVIGTP 176
QI++G+ + HSH+ IIHRD+K +NI ++ G VK+ D G A + + T
Sbjct: 132 QIINGIGFCHSHN--IIHRDIKPENILVS-QSGVVKLCDFGFARTLAAPGEVYDDEVATR 188
Query: 177 EFMAPELY--DENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSS-------- 226
+ APEL D Y + D+++ G + EM E + + Q+Y +
Sbjct: 189 WYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRH 248
Query: 227 ---GIKPAALSKVKDPEVKS-----------------FIEKCL-VPASQRLSAKELLMDP 265
K + V+ PE+K +KCL + +R ELL
Sbjct: 249 QELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHD 308
Query: 266 FLQVNG 271
F Q++G
Sbjct: 309 FFQMDG 314
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 21/211 (9%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + ++ + V I+ EL +L Q
Sbjct: 61 FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI 119
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
+ Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 120 QMELDHERMSYLLY--QMLVGIKHLHSAG--IIHRDLKPSNIVVKSD-ATLKILDFGLA- 173
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRN 216
+ S + TP + APE + Y E DI+S G+ M EM+ + +
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDH 230
Query: 217 SAQIYKKVSS-GIKPAALSKVKDPEVKSFIE 246
Q K + G K P V++++E
Sbjct: 231 IDQWNKVIEQLGTPSPEFMKKLQPTVRTYVE 261
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D VN + VA ++ + +R E+ +L +H NII N I +Q
Sbjct: 44 AYDNVNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDIIRAPTIEQ 99
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V I+ +L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 100 MKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 155
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 156 NLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 214
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 215 SVGCILAEMLS 225
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 15/169 (8%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW 116
SE ++ H N+I + ++ V IITE +GSL + R G
Sbjct: 57 SEASIMGQFDHPNVIHLEG--VVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGM 114
Query: 117 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA----KSV 172
R I +G+ YL D +HR L NI +N N K+ D GL+ +E + S
Sbjct: 115 LRGIAAGMKYLA--DMNYVHRALAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSA 171
Query: 173 IGTP---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRN 216
+G + APE + + +D++S+G+ M E++++ E PY + N
Sbjct: 172 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 220
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 117
E ++ +L H +++ Y + + + + IITE +G L Y R
Sbjct: 69 EAKVMMNLSHEKLVQLYG--VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 126
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP- 176
+ + + YL S +HRDL N +N +QG VK+ D GL+ + S +G+
Sbjct: 127 KDVCEAMEYLESKQ--FLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEETSSVGSKF 183
Query: 177 --EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ PE L ++ +DI++FG+ M E+ + + PY NS + + ++ G++
Sbjct: 184 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-ETAEHIAQGLR 239
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 21/197 (10%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNK 84
++ D+ G + A +VR++ V ++ E+ L I+ Y + +
Sbjct: 110 HRMEDKQTGFQCAVKKVRLE-VFRA--------EELMACAGLTSPRIVPLYGA--VREGP 158
Query: 85 TVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNI 144
VNI EL GSL Q + Q L GL YLHS I+H D+K DN+
Sbjct: 159 WVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR--ILHGDVKADNV 216
Query: 145 FINGNQGEVKIGDLGLATIMEQAN-AKSVI------GTPEFMAPE-LYDENYNELADIYS 196
++ + + D G A ++ KS++ GT MAPE + + + D++S
Sbjct: 217 LLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWS 276
Query: 197 FGMCMLEMVTFEYPYSE 213
ML M+ +P+++
Sbjct: 277 SCCMMLHMLNGCHPWTQ 293
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 20/148 (13%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 184
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYS--ECRNSAQIY--KKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ E Q++ ++VSS E
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSS-------------EC 231
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQ 268
+ I CL + S R + +E+ P++Q
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 33/182 (18%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 217
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYS--ECRNSAQIY--KKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ E Q++ ++VSS E
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSS-------------EC 264
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVGAFGDRCLMSEG 300
+ I CL + S R + +E+ P++Q D++LP+ A +S G
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQETAEIHLHSLSPG 311
Query: 301 PA 302
P+
Sbjct: 312 PS 313
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 33/182 (18%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 216
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYS--ECRNSAQIY--KKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ E Q++ ++VSS E
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSS-------------EC 263
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVGAFGDRCLMSEG 300
+ I CL + S R + +E+ P++Q D++LP+ A +S G
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQETAEIHLHSLSPG 310
Query: 301 PA 302
P+
Sbjct: 311 PS 312
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 33/182 (18%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 216
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYS--ECRNSAQIY--KKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ E Q++ ++VSS E
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSS-------------EC 263
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVGAFGDRCLMSEG 300
+ I CL + S R + +E+ P++Q D++LP+ A +S G
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQETAEIHLHSLSPG 310
Query: 301 PA 302
P+
Sbjct: 311 PS 312
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX-- 111
E E ++K L+H +++ Y + + I+TE + GSL +
Sbjct: 51 EAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP 107
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANA 169
A QI SG+ Y+ + +HRDL+ NI + G K+ D GLA ++E + A
Sbjct: 108 QLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTA 164
Query: 170 KSVIGTP-EFMAPE--LYDENYNELADIYSFGMCMLEMVT 206
+ P ++ APE LY + +D++SFG+ + E+ T
Sbjct: 165 RQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTT 203
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + IITE T G+L
Sbjct: 46 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLD 103
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHRDL N + N VK+ D
Sbjct: 104 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADF 160
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 161 GLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 213
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 33/182 (18%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 203
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ R ++VS E
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSX-------------EC 250
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVGAFGDRCLMSEG 300
+ I CL + S R + +E+ P++Q D++LP+ A +S G
Sbjct: 251 QHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQETAEIHLHSLSPG 297
Query: 301 PA 302
P+
Sbjct: 298 PS 299
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 33/182 (18%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 217
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYS--ECRNSAQIY--KKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ E Q++ ++VSS E
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSS-------------EC 264
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVGAFGDRCLMSEG 300
+ I CL + S R + +E+ P++Q D++LP+ A +S G
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQETAEIHLHSLSPG 311
Query: 301 PA 302
P+
Sbjct: 312 PS 313
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + IITE T G+L
Sbjct: 39 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLD 96
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHRDL N + N VK+ D
Sbjct: 97 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADF 153
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 154 GLSRLMTGDTXTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 206
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX-- 111
E E ++K L+H +++ Y + + I+TE + GSL +
Sbjct: 47 EAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 103
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANA 169
A QI SG+ Y+ + +HRDL+ NI + G K+ D GLA ++E + A
Sbjct: 104 QLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTA 160
Query: 170 KSVIGTP-EFMAPE--LYDENYNELADIYSFGMCMLEMVT 206
+ P ++ APE LY + +D++SFG+ + E+ T
Sbjct: 161 RQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTT 199
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX-- 111
E E ++K L+H +++ Y + + I+TE + GSL +
Sbjct: 49 EAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 105
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANA 169
A QI SG+ Y+ + +HRDL+ NI + G K+ D GLA ++E + A
Sbjct: 106 QLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTA 162
Query: 170 KSVIGTP-EFMAPE--LYDENYNELADIYSFGMCMLEMVT 206
+ P ++ APE LY + +D++SFG+ + E+ T
Sbjct: 163 RQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTT 201
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 117
E ++ +L H +++ Y + + + + IITE +G L Y R
Sbjct: 69 EAKVMMNLSHEKLVQLYG--VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 126
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP- 176
+ + + YL S +HRDL N +N +QG VK+ D GL+ + S +G+
Sbjct: 127 KDVCEAMEYLESKQ--FLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKF 183
Query: 177 --EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ PE L ++ +DI++FG+ M E+ + + PY NS + + ++ G++
Sbjct: 184 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-ETAEHIAQGLR 239
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 26/193 (13%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNK 84
YK ++ VA ++R++ +P R EV LLK LKH NI+ ++ I K
Sbjct: 19 YKGKSKLTDNLVALKEIRLEHEEGAPCTAIR---EVSLLKDLKHANIVTLHD--IIHTEK 73
Query: 85 TVNIITELFTSGSLRQYRXXXXXXXXXXXXG-WARQILSGLIYLHSHDPPIIHRDLKCDN 143
++ ++ E + L+QY + Q+L GL Y H ++HRDLK N
Sbjct: 74 SLTLVFE-YLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK--VLHRDLKPQN 130
Query: 144 IFINGNQGEVKIGDLGLATIMEQANAKSV--------IGTPEFMAPE--LYDENYNELAD 193
+ IN +GE+K+ D GL A AKS+ + T + P+ L +Y+ D
Sbjct: 131 LLIN-ERGELKLADFGL------ARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQID 183
Query: 194 IYSFGMCMLEMVT 206
++ G EM T
Sbjct: 184 MWGVGCIFYEMAT 196
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 108/237 (45%), Gaps = 26/237 (10%)
Query: 50 PEDLERLYSEVHLLK-SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
PE EV LL+ S +H N+IR++ + D Q + + I EL + +L++Y
Sbjct: 58 PECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI--EL-CAATLQEYVEQKDFA 114
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVK--IGDLGLATI 163
+Q SGL +LHS + I+HRDLK NI I+ G++K I D GL
Sbjct: 115 HLGLEPITLLQQTTSGLAHLHSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172
Query: 164 MEQ-----ANAKSVIGTPEFMAPELYDENYNE----LADIYSFGMCMLEMVTFE--YPYS 212
+ + V GT ++APE+ E+ E DI+S G C+ V E +P+
Sbjct: 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAG-CVFYYVISEGSHPFG 231
Query: 213 E-CRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVPASQ-RLSAKELLMDPFL 267
+ + A I S + K +D + IEK + Q R SAK +L PF
Sbjct: 232 KSLQRQANILLGACS-LDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 36 VAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFT 94
VA +VR+DD + P R E+ LLK LKH NI+R ++ + +K + ++ E
Sbjct: 30 VALKRVRLDDDDEGVPSSALR---EICLLKELKHKNIVRLHD--VLHSDKKLTLVFEFCD 84
Query: 95 SGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVK 154
+ + + Q+L GL + HS + ++HRDLK N+ IN N GE+K
Sbjct: 85 QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN--VLHRDLKPQNLLINRN-GELK 141
Query: 155 IGDLGLA 161
+ + GLA
Sbjct: 142 LANFGLA 148
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 91/211 (43%), Gaps = 21/211 (9%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + ++ + V I+ EL +L Q
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI 119
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
+ Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 120 QMELDHERMSYLLY--QMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-ATLKILDFGLA- 173
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRN 216
+ S + TP + APE + Y E DI+S G M EM+ + +
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Query: 217 SAQIYKKVSS-GIKPAALSKVKDPEVKSFIE 246
Q K + G K P V++++E
Sbjct: 231 IDQWNKVIEQLGTPSPEFMKKLQPTVRTYVE 261
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + IITE T G+L
Sbjct: 39 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLD 96
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHRDL N + N VK+ D
Sbjct: 97 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADF 153
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 154 GLSRLMTGDTFTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 206
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX-- 111
E E ++K L+H +++ Y + + I+TE + GSL +
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP 280
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANA 169
A QI SG+ Y+ + +HRDL+ NI + G K+ D GLA ++E + A
Sbjct: 281 QLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTA 337
Query: 170 KSVIGTP-EFMAPE--LYDENYNELADIYSFGMCMLEMVT 206
+ P ++ APE LY + +D++SFG+ + E+ T
Sbjct: 338 RQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTT 376
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 33/182 (18%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 204
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ R ++VS E
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSX-------------EC 251
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVGAFGDRCLMSEG 300
+ I CL + S R + +E+ P++Q D++LP+ A +S G
Sbjct: 252 QHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQETAEIHLHSLSPG 298
Query: 301 PA 302
P+
Sbjct: 299 PS 300
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 20 VDTSGYKAFDEV-NGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSW 78
V+ G F EV G +V + + Q + +E +L+K L+H ++R Y
Sbjct: 14 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV- 72
Query: 79 IDDQNKTVNIITELFTSGSLRQYRXX--XXXXXXXXXXGWARQILSGLIYLHSHDPPIIH 136
+ + IITE +GSL + A QI G+ ++ + IH
Sbjct: 73 --VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIH 128
Query: 137 RDLKCDNIFINGNQGEVKIGDLGLATIME--QANAKSVIGTP-EFMAPELYDENYNEL-- 191
R+L+ NI ++ + KI D GLA ++E + A+ P ++ APE NY
Sbjct: 129 RNLRAANILVS-DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI--NYGTFTI 185
Query: 192 -ADIYSFGMCMLEMVTF-EYPYSECRNSAQI 220
+D++SFG+ + E+VT PY N I
Sbjct: 186 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 216
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 43/258 (16%)
Query: 48 QSPEDLERLYSEVHLLKSLKHN-NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX 106
Q+ R++ EV L + N NI+ + DD ++ E GS+ +
Sbjct: 49 QAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTR--FYLVFEKLQGGSILAHIQKQK 106
Query: 107 XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQ--GEVKIGDLGLATIM 164
R + + L +LH+ I HRDLK +NI + VKI D L + M
Sbjct: 107 HFNEREASRVVRDVAAALDFLHTKG--IAHRDLKPENILCESPEKVSPVKICDFDLGSGM 164
Query: 165 EQANAKSVIGTP---------EFMAPELYD------ENYNELADIYSFGMCMLEMVTFEY 209
+ N+ + I TP E+MAPE+ + Y++ D++S G+ + M++
Sbjct: 165 KLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYP 224
Query: 210 PY----------------SECRNSAQIYKKVSSGIK--PAALSKVKDPEVKSFIEKCLV- 250
P+ C+N ++++ + G P E K I K LV
Sbjct: 225 PFVGHCGADCGWDRGEVCRVCQN--KLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVR 282
Query: 251 PASQRLSAKELLMDPFLQ 268
A QRLSA ++L P++Q
Sbjct: 283 DAKQRLSAAQVLQHPWVQ 300
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX-- 111
E E ++K L+H +++ Y + + I+TE + GSL +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANA 169
A QI SG+ Y+ + +HRDL+ NI + G K+ D GLA ++E + A
Sbjct: 115 QLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTA 171
Query: 170 KSVIGTP-EFMAPE--LYDENYNELADIYSFGMCMLEMVT 206
+ P ++ APE LY + +D++SFG+ + E+ T
Sbjct: 172 RQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTT 210
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 33/182 (18%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 177 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 236
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ R ++VS E
Sbjct: 237 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSX-------------EC 283
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVGAFGDRCLMSEG 300
+ I CL + S R + +E+ P++Q D++LP+ A +S G
Sbjct: 284 QHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQETAEIHLHSLSPG 330
Query: 301 PA 302
P+
Sbjct: 331 PS 332
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX-- 111
E E ++K L+H +++ Y + + I+TE + GSL +
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP 280
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANA 169
A QI SG+ Y+ + +HRDL+ NI + G K+ D GLA ++E + A
Sbjct: 281 QLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTA 337
Query: 170 KSVIGTP-EFMAPE--LYDENYNELADIYSFGMCMLEMVT 206
+ P ++ APE LY + +D++SFG+ + E+ T
Sbjct: 338 RQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTT 376
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 130 HDPPIIHRDLKCDNIFINGNQGEVKIGDLG-LATIMEQANAKS--VIGTPEFMAPELYDE 186
H +HRD+K DNI ++ N G +++ D G +ME +S +GTP++++PE+
Sbjct: 192 HQLHYVHRDIKPDNILMDMN-GHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA 250
Query: 187 ------NYNELADIYSFGMCMLEMVTFEYPY 211
Y D +S G+CM EM+ E P+
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 20/148 (13%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 152 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 211
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ R ++VS E
Sbjct: 212 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSX-------------EC 258
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQ 268
+ I CL + S R + +E+ P++Q
Sbjct: 259 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 286
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 33/182 (18%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 231
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPYSE----CRNSAQIYKKVSSGIKPAALSKVKDPEV 241
+ A ++S G+ + +MV + P+ R ++VS E
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSX-------------EC 278
Query: 242 KSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPLPLPDIVLPRVGAFGDRCLMSEG 300
+ I CL + S R + +E+ P++Q D++LP+ A +S G
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWMQ-------------DVLLPQETAEIHLHSLSPG 325
Query: 301 PA 302
P+
Sbjct: 326 PS 327
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + IITE T G+L
Sbjct: 46 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLD 103
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHRDL N + N VK+ D
Sbjct: 104 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADF 160
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 161 GLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 213
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + IITE T G+L
Sbjct: 46 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLD 103
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHRDL N + N VK+ D
Sbjct: 104 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADF 160
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 161 GLSRLMTGDTXTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 213
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 117
E ++ +L H +++ Y + + + + IITE +G L Y R
Sbjct: 53 EAKVMMNLSHEKLVQLYG--VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 110
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP- 176
+ + + YL S +HRDL N +N +QG VK+ D GL+ + S +G+
Sbjct: 111 KDVCEAMEYLESKQ--FLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKF 167
Query: 177 --EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ PE L ++ +DI++FG+ M E+ + + PY NS + + ++ G++
Sbjct: 168 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-ETAEHIAQGLR 223
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + IITE T G+L
Sbjct: 41 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLD 98
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHRDL N + N VK+ D
Sbjct: 99 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADF 155
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 156 GLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 91/211 (43%), Gaps = 21/211 (9%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + ++ + V I+ EL +L Q
Sbjct: 61 FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI 119
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
+ Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 120 QMELDHERMSYLLY--QMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-ATLKILDFGLA- 173
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRN 216
+ S + TP + APE + Y E DI+S G M EM+ + +
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Query: 217 SAQIYKKVSS-GIKPAALSKVKDPEVKSFIE 246
Q K + G K P V++++E
Sbjct: 231 IDQWNKVIEQLGTPSPEFMKKLQPTVRTYVE 261
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 21/167 (12%)
Query: 61 HLLK--SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL----RQYRXXXXXXXXXXXX 114
H+L SL H +I+R ++ ++T+ GSL RQ+R
Sbjct: 83 HMLAIGSLDHAHIVRLLGL---CPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLL--- 136
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK---S 171
W QI G+ YL H ++HR+L N+ + + +V++ D G+A ++ + + S
Sbjct: 137 NWGVQIAKGMYYLEEHG--MVHRNLAARNVLLK-SPSQVQVADFGVADLLPPDDKQLLYS 193
Query: 172 VIGTP-EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECR 215
TP ++MA E ++ Y +D++S+G+ + E++TF PY+ R
Sbjct: 194 EAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR 240
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + IITE T G+L
Sbjct: 41 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLD 98
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHRDL N + N VK+ D
Sbjct: 99 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADF 155
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 156 GLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 117
E ++ +L H +++ Y + + + + IITE +G L Y R
Sbjct: 49 EAKVMMNLSHEKLVQLYG--VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 106
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP- 176
+ + + YL S +HRDL N +N +QG VK+ D GL+ + S +G+
Sbjct: 107 KDVCEAMEYLESKQ--FLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKF 163
Query: 177 --EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ PE L ++ +DI++FG+ M E+ + + PY NS + + ++ G++
Sbjct: 164 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-ETAEHIAQGLR 219
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 91/211 (43%), Gaps = 21/211 (9%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + ++ + V I+ EL +L Q
Sbjct: 61 FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI 119
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
+ Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 120 QMELDHERMSYLLY--QMLVGIKHLHSAG--IIHRDLKPSNIVVKSD-ATLKILDFGLA- 173
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRN 216
+ S + TP + APE + Y E DI+S G M EM+ + +
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Query: 217 SAQIYKKVSS-GIKPAALSKVKDPEVKSFIE 246
Q K + G K P V++++E
Sbjct: 231 IDQWNKVIEQLGTPSPEFMKKLQPTVRTYVE 261
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + IITE T G+L
Sbjct: 45 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLD 102
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHRDL N + N VK+ D
Sbjct: 103 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADF 159
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 160 GLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 212
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D +N + VA ++ + +R E+ +L +H NII N I +Q
Sbjct: 46 AYDNLNKVRVAIKKI---SPFEHQTYCQRTLREIKILLRFRHENIIGI-NDIIRAPTIEQ 101
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V I+ +L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 102 MKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 157
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 158 NLLLNTTX-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 216
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 217 SVGCILAEMLS 227
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + IITE T G+L
Sbjct: 46 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLD 103
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHRDL N + N VK+ D
Sbjct: 104 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADF 160
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 161 GLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 213
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 82/188 (43%), Gaps = 34/188 (18%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX-- 106
SP +L L SE ++LK + H ++I+ Y + Q+ + +I E GSLR +
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGA--CSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 107 ----------------------XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNI 144
+A QI G+ YL ++HRDL NI
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS--LVHRDLAARNI 181
Query: 145 FINGNQGEVKIGDLGLA--TIMEQANAKSVIGT--PEFMAPE-LYDENYNELADIYSFGM 199
+ + ++KI D GL+ E + K G ++MA E L+D Y +D++SFG+
Sbjct: 182 LVAEGR-KMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
Query: 200 CMLEMVTF 207
+ E+VT
Sbjct: 241 LLWEIVTL 248
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 11/173 (6%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + IITE T G+L
Sbjct: 42 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLD 99
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHRDL N + N VK+ D
Sbjct: 100 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADF 156
Query: 159 GLATIMEQANAKSVIGTP---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M + G ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 157 GLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 209
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 82/188 (43%), Gaps = 34/188 (18%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX-- 106
SP +L L SE ++LK + H ++I+ Y + Q+ + +I E GSLR +
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGA--CSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 107 ----------------------XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNI 144
+A QI G+ YL ++HRDL NI
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNI 181
Query: 145 FINGNQGEVKIGDLGLA--TIMEQANAKSVIGT--PEFMAPE-LYDENYNELADIYSFGM 199
+ + ++KI D GL+ E + K G ++MA E L+D Y +D++SFG+
Sbjct: 182 LVAEGR-KMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
Query: 200 CMLEMVTF 207
+ E+VT
Sbjct: 241 LLWEIVTL 248
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 20/169 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + + + V ++ EL + + +
Sbjct: 99 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 158
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 159 MELDHERMSYLL---YQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA- 211
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMV 205
+ S + TP + APE + Y E DI+S G M EMV
Sbjct: 212 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 16/141 (11%)
Query: 130 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME---QANAKSVIGTPEFMAPELYDE 186
H +HRD+K DN+ ++ N G +++ D G M + +GTP++++PE+
Sbjct: 208 HQLHYVHRDIKPDNVLLDVN-GHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 266
Query: 187 ------NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK----PAALSKV 236
Y D +S G+CM EM+ E P+ + + Y K+ + + P+ ++ V
Sbjct: 267 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFY-AESLVETYGKIMNHEERFQFPSHVTDV 325
Query: 237 KDPEVKSFIEKCLVPASQRLS 257
+ E K I++ + +RL
Sbjct: 326 SE-EAKDLIQRLICSRERRLG 345
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 117
E ++ +L H +++ Y + + + + IITE +G L Y R
Sbjct: 60 EAKVMMNLSHEKLVQLYG--VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 117
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP- 176
+ + + YL S +HRDL N +N +QG VK+ D GL+ + S +G+
Sbjct: 118 KDVCEAMEYLESKQ--FLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKF 174
Query: 177 --EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ PE L ++ +DI++FG+ M E+ + + PY NS + + ++ G++
Sbjct: 175 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-ETAEHIAQGLR 230
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + ++ + V I+ EL + + +
Sbjct: 66 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ 125
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 126 MELDHERMSYL---LYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA- 178
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRN 216
+ S + TP + APE + Y E D++S G M EMV + + R+
Sbjct: 179 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG-RD 234
Query: 217 SAQIYKKVSSGIK---PAALSKVKDPEVKSFIE 246
+ KV + P + K++ P V++++E
Sbjct: 235 YIDQWNKVIEQLGTPCPEFMKKLQ-PTVRTYVE 266
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + ++ + V I+ EL + + +
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ 120
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 121 MELDHERMSYL---LYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA- 173
Query: 163 IMEQANAKSVIGTPE-----FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRN 216
+ S + PE + APE + Y E D++S G M EMV + + R+
Sbjct: 174 ---RTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG-RD 229
Query: 217 SAQIYKKVSSGIK---PAALSKVKDPEVKSFIE 246
+ KV + P + K++ P V++++E
Sbjct: 230 YIDQWNKVIEQLGTPCPEFMKKLQ-PTVRTYVE 261
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 16/141 (11%)
Query: 130 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME---QANAKSVIGTPEFMAPELYDE 186
H +HRD+K DN+ ++ N G +++ D G M + +GTP++++PE+
Sbjct: 192 HQLHYVHRDIKPDNVLLDVN-GHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 250
Query: 187 ------NYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK----PAALSKV 236
Y D +S G+CM EM+ E P+ + + Y K+ + + P+ ++ V
Sbjct: 251 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFY-AESLVETYGKIMNHEERFQFPSHVTDV 309
Query: 237 KDPEVKSFIEKCLVPASQRLS 257
+ E K I++ + +RL
Sbjct: 310 SE-EAKDLIQRLICSRERRLG 329
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D +N + VA ++ + +R E+ +L +H NII N I +Q
Sbjct: 46 AYDNLNKVRVAIKKI---SPFEHQTYXQRTLREIKILLRFRHENIIGI-NDIIRAPTIEQ 101
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V I+ +L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 102 MKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 157
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 158 NLLLNTTX-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 216
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 217 SVGCILAEMLS 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D +N + VA ++ + +R E+ +L +H NII N I +Q
Sbjct: 47 AYDNLNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDIIRAPTIEQ 102
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V I+ +L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 103 MKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 158
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 159 NLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 217
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 218 SVGCILAEMLS 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D +N + VA ++ + +R E+ +L +H NII N I +Q
Sbjct: 48 AYDNLNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDIIRAPTIEQ 103
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V I+ +L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 104 MKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 159
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 160 NLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 218
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 219 SVGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D +N + VA ++ + +R E+ +L +H NII N I +Q
Sbjct: 39 AYDNLNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDIIRAPTIEQ 94
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V I+ +L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 95 MKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 150
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 151 NLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 209
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 210 SVGCILAEMLS 220
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D +N + VA ++ + +R E+ +L +H NII N I +Q
Sbjct: 46 AYDNLNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDIIRAPTIEQ 101
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V I+ +L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 102 MKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 157
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 158 NLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 216
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 217 SVGCILAEMLS 227
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + IITE T G+L
Sbjct: 43 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLD 100
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHRDL N + N VK+ D
Sbjct: 101 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADF 157
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 158 GLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 210
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 11/173 (6%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + IITE T G+L
Sbjct: 43 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLD 100
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHRDL N + N VK+ D
Sbjct: 101 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADF 157
Query: 159 GLATIMEQANAKSVIGTP---EFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M + G ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 158 GLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 210
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 21/167 (12%)
Query: 61 HLLK--SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL----RQYRXXXXXXXXXXXX 114
H+L SL H +I+R ++ ++T+ GSL RQ+R
Sbjct: 65 HMLAIGSLDHAHIVRLLGL---CPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLL--- 118
Query: 115 GWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAK---S 171
W QI G+ YL H ++HR+L N+ + + +V++ D G+A ++ + + S
Sbjct: 119 NWGVQIAKGMYYLEEHG--MVHRNLAARNVLLK-SPSQVQVADFGVADLLPPDDKQLLYS 175
Query: 172 VIGTP-EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECR 215
TP ++MA E ++ Y +D++S+G+ + E++TF PY+ R
Sbjct: 176 EAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR 222
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D +N + VA ++ + +R E+ +L +H NII N I +Q
Sbjct: 40 AYDNLNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDIIRAPTIEQ 95
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V I+ +L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 96 MKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 151
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 152 NLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 210
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 211 SVGCILAEMLS 221
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + + + V ++ EL +L Q
Sbjct: 61 FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI 119
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
+ Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 120 QMELDHERMSYLLY--QMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXT-LKILDFGLA- 173
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRN 216
+ S + TP + APE + Y E DI+S G M EMV + + R+
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRD 229
Query: 217 SAQIYKKVSSGIK---PAALSKVKDPEVKSFIE 246
+ KV + P + K++ P V++++E
Sbjct: 230 YIDQWNKVIEQLGTPCPEFMKKLQ-PTVRNYVE 261
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + IITE T G+L
Sbjct: 43 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLD 100
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHRDL N + N VK+ D
Sbjct: 101 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADF 157
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 158 GLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 210
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D +N + VA ++ + +R E+ +L +H NII N I +Q
Sbjct: 46 AYDNLNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDIIRAPTIEQ 101
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V I+ +L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 102 MKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 157
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 158 NLLLN-TTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIW 216
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 217 SVGCILAEMLS 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D +N + VA ++ + +R E+ +L +H NII N I +Q
Sbjct: 47 AYDNLNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDIIRAPTIEQ 102
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V I+ +L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 103 MKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 158
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 159 NLLLN-TTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIW 217
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 218 SVGCILAEMLS 228
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 91/211 (43%), Gaps = 21/211 (9%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + ++ + V I+ EL +L Q
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI 119
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
+ Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 120 QMELDHERMSYLLY--QMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA- 173
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRN 216
+ S + TP + APE + Y E DI+S G M EM+ + +
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Query: 217 SAQIYKKVSS-GIKPAALSKVKDPEVKSFIE 246
Q K + G K P V++++E
Sbjct: 231 IDQWNKVIEQLGTPSPEFMKKLQPTVRTYVE 261
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D +N + VA ++ + +R E+ +L +H NII N I +Q
Sbjct: 40 AYDNLNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDIIRAPTIEQ 95
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V I+ +L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 96 MKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 151
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 152 NLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 210
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 211 SVGCILAEMLS 221
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGWA 117
E ++ +L H +++ Y + + + + IITE +G L Y R
Sbjct: 54 EAKVMMNLSHEKLVQLYG--VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 111
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTP- 176
+ + + YL S +HRDL N +N +QG VK+ D GL+ + S +G+
Sbjct: 112 KDVCEAMEYLESKQ--FLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKF 168
Query: 177 --EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ PE L ++ +DI++FG+ M E+ + + PY NS + + ++ G++
Sbjct: 169 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-ETAEHIAQGLR 224
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + ++ + V I+ EL + + +
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ 120
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 121 MELDHERMSYL---LYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA- 173
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRN 216
+ S + TP + APE + Y E DI+S G M EM+ + +
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Query: 217 SAQIYKKVSS-GIKPAALSKVKDPEVKSFIE 246
Q K + G K P V++++E
Sbjct: 231 IDQWNKVIEQLGTPSPEFMKKLQPTVRTYVE 261
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + IITE T G+L
Sbjct: 54 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLD 111
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHRDL N + N VK+ D
Sbjct: 112 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADF 168
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 169 GLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 221
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + + + V ++ EL +L Q
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI 119
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
+ Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 120 QMELDHERMSYLLY--QMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXT-LKILDFGLA- 173
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRN 216
+ S + TP + APE + Y E DI+S G M EMV + + R+
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRD 229
Query: 217 SAQIYKKVSSGIK---PAALSKVKDPEVKSFIE 246
+ KV + P + K++ P V++++E
Sbjct: 230 YIDQWNKVIEQLGTPCPEFMKKLQ-PTVRNYVE 261
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + ++ + V I+ EL + + +
Sbjct: 55 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ 114
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 115 MELDHERMSYL---LYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA- 167
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRN 216
+ S + TP + APE + Y E D++S G M EMV + + R+
Sbjct: 168 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG-RD 223
Query: 217 SAQIYKKVSSGIK---PAALSKVKDPEVKSFIE 246
+ KV + P + K++ P V++++E
Sbjct: 224 YIDQWNKVIEQLGTPCPEFMKKLQ-PTVRTYVE 255
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + IITE T G+L
Sbjct: 41 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLD 98
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHRDL N + N VK+ D
Sbjct: 99 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADF 155
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 156 GLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + IITE T G+L
Sbjct: 41 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLD 98
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHRDL N + N VK+ D
Sbjct: 99 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADF 155
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 156 GLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 82/188 (43%), Gaps = 34/188 (18%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXX-- 106
SP +L L SE ++LK + H ++I+ Y + Q+ + +I E GSLR +
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGA--CSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 107 ----------------------XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNI 144
+A QI G+ YL ++HRDL NI
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNI 181
Query: 145 FINGNQGEVKIGDLGLA--TIMEQANAKSVIGT--PEFMAPE-LYDENYNELADIYSFGM 199
+ + ++KI D GL+ E + K G ++MA E L+D Y +D++SFG+
Sbjct: 182 LVAEGR-KMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
Query: 200 CMLEMVTF 207
+ E+VT
Sbjct: 241 LLWEIVTL 248
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 20/169 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + ++ + V I+ EL + + +
Sbjct: 62 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ 121
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 122 MELDHERMSYL---LYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA- 174
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMV 205
+ S + TP + APE + Y E DI+S G M EM+
Sbjct: 175 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 220
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX-- 111
E E ++K ++H +++ Y + + I+TE + GSL +
Sbjct: 58 EAFLQEAQVMKKIRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANA 169
A QI SG+ Y+ + +HRDL+ NI + G K+ D GLA ++E + A
Sbjct: 115 QLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTA 171
Query: 170 KSVIGTP-EFMAPE--LYDENYNELADIYSFGMCMLEMVT 206
+ P ++ APE LY + +D++SFG+ + E+ T
Sbjct: 172 RQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTT 210
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 12/163 (7%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 118
E+ L I+ Y + + VNI EL GSL Q +
Sbjct: 116 ELMACAGLTSPRIVPLYGA--VREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG 173
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ-------ANAKS 171
Q L GL YLHS I+H D+K DN+ ++ + + D G A ++
Sbjct: 174 QALEGLEYLHSRR--ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY 231
Query: 172 VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSE 213
+ GT MAPE + + + D++S ML M+ +P+++
Sbjct: 232 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQ 274
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 100/220 (45%), Gaps = 12/220 (5%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXX 113
+L E+ + L H NI+R YN + D + + +I E G L +
Sbjct: 68 HQLRREIEIQAHLHHPNILRLYNYFYD--RRRIYLILEYAPRGELYKELQKSCTFDEQRT 125
Query: 114 XGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVI 173
++ L+Y H +IHRD+K +N+ + G +GE+KI D G + K++
Sbjct: 126 ATIMEELADALMYCHGKK--VIHRDIKPENL-LLGLKGELKIADFGWSVHAPSLRRKTMC 182
Query: 174 GTPEFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIK-PA 231
GT +++ PE+ + +NE D++ G+ E++ P+ ++ + V +K PA
Sbjct: 183 GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPA 242
Query: 232 ALSKVKDPEVKSFIEKCLVP-ASQRLSAKELLMDPFLQVN 270
++ + I K L S+RL ++ P+++ N
Sbjct: 243 SVPT----GAQDLISKLLRHNPSERLPLAQVSAHPWVRAN 278
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + + + V ++ EL +L Q
Sbjct: 61 FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI 119
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
+ Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 120 QMELDHERMSYLLY--QMLCGIKHLHSAG--IIHRDLKPSNIVVKSDX-TLKILDFGLA- 173
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRN 216
+ S + TP + APE + Y E DI+S G M EMV + + R+
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRD 229
Query: 217 SAQIYKKVSSGIK---PAALSKVKDPEVKSFIE 246
+ KV + P + K++ P V++++E
Sbjct: 230 YIDQWNKVIEQLGTPCPEFMKKLQ-PTVRNYVE 261
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 27 AFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWID----DQ 82
A+D +N + VA ++ + +R E+ +L +H NII N I +Q
Sbjct: 46 AYDNLNKVRVA---IKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDIIRAPTIEQ 101
Query: 83 NKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCD 142
K V I+ +L + + + + QIL GL Y+HS + ++HRDLK
Sbjct: 102 MKDVYIVQDLMETDLYKLLKCQHLSNDHICY--FLYQILRGLKYIHSAN--VLHRDLKPS 157
Query: 143 NIFINGNQGEVKIGDLGLATIMEQANAKS-----VIGTPEFMAPE--LYDENYNELADIY 195
N+ +N ++KI D GLA + + + + + T + APE L + Y + DI+
Sbjct: 158 NLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 216
Query: 196 SFGMCMLEMVT 206
S G + EM++
Sbjct: 217 SVGCILAEMLS 227
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 20/169 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + ++ + V I+ EL + + +
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ 120
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 121 MELDHERMSYL---LYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA- 173
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMV 205
+ S + TP + APE + Y E DI+S G M EM+
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX-- 111
E E ++K L+H +++ Y + + I+TE + GSL +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANA 169
A QI SG+ Y+ + +HRDL NI + G K+ D GLA ++E + A
Sbjct: 115 QLVDMAAQIASGMAYVERMN--YVHRDLAAANILV-GENLVCKVADFGLARLIEDNEYTA 171
Query: 170 KSVIGTP-EFMAPE--LYDENYNELADIYSFGMCMLEMVT 206
+ P ++ APE LY + +D++SFG+ + E+ T
Sbjct: 172 RQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTT 210
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + + + V ++ EL +L Q
Sbjct: 54 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI 112
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
+ Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 113 QMELDHERMSYLLY--QMLXGIKHLHSAG--IIHRDLKPSNIVVKSDX-TLKILDFGLA- 166
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRN 216
+ S + TP + APE + Y E DI+S G M EMV + + R+
Sbjct: 167 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRD 222
Query: 217 SAQIYKKVSSGIK---PAALSKVKDPEVKSFIE 246
+ KV + P + K++ P V++++E
Sbjct: 223 YIDQWNKVIEQLGTPCPEFMKKLQ-PTVRNYVE 254
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +I +L G L Y R
Sbjct: 59 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDN 115
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D G A ++
Sbjct: 116 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAE 172
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 173 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 20/169 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + + + V ++ EL + + +
Sbjct: 99 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 158
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 159 MELDHERMSYLL---YQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA- 211
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMV 205
+ S + TP + APE + Y E DI+S G M EMV
Sbjct: 212 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + ++ + V I+ EL + + +
Sbjct: 63 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ 122
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA- 161
Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 123 MELDHERMSYL---LYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLAR 176
Query: 162 TIMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMV 205
T + T + APE + Y E DI+S G M EM+
Sbjct: 177 TAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 221
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 217
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPY 211
+ A ++S G+ + +MV + P+
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 20/169 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + + + V ++ EL + + +
Sbjct: 62 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 121
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 122 MELDHERMSYL---LYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA- 174
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMV 205
+ S + TP + APE + Y E DI+S G M EMV
Sbjct: 175 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 20/169 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + + + V ++ EL + + +
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 120
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 121 MELDHERMSYL---LYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA- 173
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMV 205
+ S + TP + APE + Y E DI+S G M EMV
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + + + V ++ EL + + +
Sbjct: 62 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 121
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 122 MELDHERMSYL---LYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA- 174
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRN 216
+ S + TP + APE + Y E DI+S G M EMV + + R+
Sbjct: 175 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG-RD 230
Query: 217 SAQIYKKVSSGIK---PAALSKVKDPEVKSFIE 246
+ KV + P + K++ P V++++E
Sbjct: 231 YIDQWNKVIEQLGTPCPEFMKKLQ-PTVRNYVE 262
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 216
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPY 211
+ A ++S G+ + +MV + P+
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 217
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPY 211
+ A ++S G+ + +MV + P+
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +I +L G L Y R
Sbjct: 59 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDN 115
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D G A ++
Sbjct: 116 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAE 172
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 173 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 128 HSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPEL--YD 185
H H+ ++HRD+K +NI I+ N+GE+K+ D G +++ GT + PE Y
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 204
Query: 186 ENYNELADIYSFGMCMLEMVTFEYPY 211
+ A ++S G+ + +MV + P+
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ S+ + ++ R + TV +I +L G L Y R
Sbjct: 61 SPKANKEILDEAYVMASVDNPHVCRLLGICL---TSTVQLIMQLMPFGCLLDYVREHKDN 117
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM--- 164
W QI G+ YL D ++HRDL N+ + Q VKI D G A ++
Sbjct: 118 IGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAE 174
Query: 165 -EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
++ +A+ ++MA E + Y +D++S+G+ + E++TF
Sbjct: 175 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 219
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 20/169 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + + + V ++ EL + + +
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 120
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 121 MELDHERMSYLL---YQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA- 173
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMV 205
+ S + TP + APE + Y E DI+S G M EMV
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+D +R E LL L+H +I+RF+ + + + + ++ E G L ++
Sbjct: 88 QDFQR---EAELLTMLQHQHIVRFFG--VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAK 142
Query: 111 XXXXG---------------WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKI 155
G A Q+ +G++YL +HRDL N + G VKI
Sbjct: 143 LLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLV-GQGLVVKI 199
Query: 156 GDLGLATIMEQANAKSVIGTP----EFMAPE--LYDENYNELADIYSFGMCMLEMVTF-E 208
GD G++ + + V G +M PE LY + E +D++SFG+ + E+ T+ +
Sbjct: 200 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTE-SDVWSFGVVLWEIFTYGK 258
Query: 209 YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKC 248
P+ + N+ I ++ G + + PEV + + C
Sbjct: 259 QPWYQLSNTEAI-DCITQG-RELERPRACPPEVYAIMRGC 296
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + + + V ++ EL + + +
Sbjct: 55 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 114
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 115 MELDHERMSYL---LYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA- 167
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRN 216
+ S + TP + APE + Y E DI+S G M EMV + + R+
Sbjct: 168 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG-RD 223
Query: 217 SAQIYKKVSSGIK---PAALSKVKDPEVKSFIE 246
+ KV + P + K++ P V++++E
Sbjct: 224 YIDQWNKVIEQLGTPCPEFMKKLQ-PTVRNYVE 255
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 20/169 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + + + V ++ EL + + +
Sbjct: 60 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 119
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 120 MELDHERMSYL---LYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA- 172
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMV 205
+ S + TP + APE + Y E DI+S G M EMV
Sbjct: 173 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + IITE T G+L
Sbjct: 248 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLD 305
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHR+L N + N VK+ D
Sbjct: 306 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENH-LVKVADF 362
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 363 GLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 415
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 117 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ----ANAKSV 172
A+ +G+ +LH + IHRD+K NI ++ KI D GLA E+ +
Sbjct: 139 AQGAANGINFLHENHH--IHRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXSRI 195
Query: 173 IGTPEFMAPELYDENYNELADIYSFGMCMLEMVT 206
+GT +MAPE +DIYSFG+ +LE++T
Sbjct: 196 VGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + + + V ++ EL + + +
Sbjct: 54 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 113
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 114 MELDHERMSYL---LYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA- 166
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRN 216
+ S + TP + APE + Y E DI+S G M EMV + + R+
Sbjct: 167 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG-RD 222
Query: 217 SAQIYKKVSSGIK---PAALSKVKDPEVKSFIE 246
+ KV + P + K++ P V++++E
Sbjct: 223 YIDQWNKVIEQLGTPCPEFMKKLQ-PTVRNYVE 254
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 13/212 (6%)
Query: 21 DTSGYKAFDEVNGLEVAWCQVRIDDVLQSPEDLE----RLYSEVHLLKSLKHNNIIRFYN 76
D G AF EV E Q + + E LE + +E+ +L +KH NI+ +
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 77 SWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIH 136
I + + +I +L + G L Q+L + YLH D I+H
Sbjct: 84 --IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH--DLGIVH 139
Query: 137 RDLKCDNIFING--NQGEVKIGDLGLATIMEQANAKS-VIGTPEFMAPE-LYDENYNELA 192
RDLK +N+ ++ I D GL+ + + + S GTP ++APE L + Y++
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 193 DIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 224
D +S G+ ++ P+ + N A++++++
Sbjct: 200 DCWSIGVIAYILLCGYPPFYD-ENDAKLFEQI 230
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+D +R E LL L+H +I+RF+ + + + + ++ E G L ++
Sbjct: 65 QDFQR---EAELLTMLQHQHIVRFFG--VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAK 119
Query: 111 XXXXG---------------WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKI 155
G A Q+ +G++YL +HRDL N + G VKI
Sbjct: 120 LLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLV-GQGLVVKI 176
Query: 156 GDLGLATIMEQANAKSVIGTP----EFMAPE--LYDENYNELADIYSFGMCMLEMVTF-E 208
GD G++ + + V G +M PE LY + E +D++SFG+ + E+ T+ +
Sbjct: 177 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTE-SDVWSFGVVLWEIFTYGK 235
Query: 209 YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKC 248
P+ + N+ I ++ G + + PEV + + C
Sbjct: 236 QPWYQLSNTEAI-DCITQG-RELERPRACPPEVYAIMRGC 273
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + + + V ++ EL + + +
Sbjct: 55 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 114
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 115 MELDHERMSYLL---YQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA- 167
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRN 216
+ S + TP + APE + Y E DI+S G M EMV + + R+
Sbjct: 168 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG-RD 223
Query: 217 SAQIYKKVSSGIK---PAALSKVKDPEVKSFIE 246
+ KV + P + K++ P V++++E
Sbjct: 224 YIDQWNKVIEQLGTPCPEFMKKLQ-PTVRNYVE 255
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 51 EDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXX 110
+D +R E LL L+H +I+RF+ + + + + ++ E G L ++
Sbjct: 59 QDFQR---EAELLTMLQHQHIVRFFG--VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAK 113
Query: 111 XXXXG---------------WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKI 155
G A Q+ +G++YL +HRDL N + G VKI
Sbjct: 114 LLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLV-GQGLVVKI 170
Query: 156 GDLGLATIMEQANAKSVIGTP----EFMAPE--LYDENYNELADIYSFGMCMLEMVTF-E 208
GD G++ + + V G +M PE LY + E +D++SFG+ + E+ T+ +
Sbjct: 171 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTE-SDVWSFGVVLWEIFTYGK 229
Query: 209 YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKC 248
P+ + N+ I ++ G + + PEV + + C
Sbjct: 230 QPWYQLSNTEAI-DCITQG-RELERPRACPPEVYAIMRGC 267
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX-- 111
E E ++K L+H +++ Y + + I+TE + G L +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLP 114
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANA 169
A QI SG+ Y+ + +HRDL+ NI + G K+ D GLA ++E + A
Sbjct: 115 QLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTA 171
Query: 170 KSVIGTP-EFMAPE--LYDENYNELADIYSFGMCMLEMVT 206
+ P ++ APE LY + +D++SFG+ + E+ T
Sbjct: 172 RQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTT 210
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 47 LQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN----KTVNIITELFTSGSLRQYR 102
Q+ +R Y E+ L+K + H NII N + + + V ++ EL + + +
Sbjct: 61 FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 120
Query: 103 XXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
Q+L G+ +LHS IIHRDLK NI + + +KI D GLA
Sbjct: 121 MELDHERMSYL---LYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDX-TLKILDFGLA- 173
Query: 163 IMEQANAKSVIGTP-----EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRN 216
+ S + TP + APE + Y E DI+S G M EMV + + R+
Sbjct: 174 ---RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRD 229
Query: 217 SAQIYKKVSSGIK---PAALSKVKDPEVKSFIE 246
+ KV + P + K++ P V++++E
Sbjct: 230 YIDQWNKVIEQLGTPCPEFMKKLQ-PTVRNYVE 261
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX-- 111
E E ++K L+H +++ Y + + I+ E + GSL +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANA 169
A QI SG+ Y+ + +HRDL+ NI + G K+ D GLA ++E + A
Sbjct: 115 QLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEXTA 171
Query: 170 KSVIGTP-EFMAPE--LYDENYNELADIYSFGMCMLEMVT 206
+ P ++ APE LY + +D++SFG+ + E+ T
Sbjct: 172 RQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTT 210
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 13/212 (6%)
Query: 21 DTSGYKAFDEVNGLEVAWCQVRIDDVLQSPEDLE----RLYSEVHLLKSLKHNNIIRFYN 76
D G AF EV E Q + + E LE + +E+ +L +KH NI+ +
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 77 SWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIH 136
I + + +I +L + G L Q+L + YLH D I+H
Sbjct: 84 --IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH--DLGIVH 139
Query: 137 RDLKCDNIFING--NQGEVKIGDLGLATIMEQANAKS-VIGTPEFMAPE-LYDENYNELA 192
RDLK +N+ ++ I D GL+ + + + S GTP ++APE L + Y++
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 193 DIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 224
D +S G+ ++ P+ + N A++++++
Sbjct: 200 DCWSIGVIAYILLCGYPPFYD-ENDAKLFEQI 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 117 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ----ANAKSV 172
A+ +G+ +LH + IHRD+K NI ++ KI D GLA E+ +
Sbjct: 139 AQGAANGINFLHENHH--IHRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXXRI 195
Query: 173 IGTPEFMAPELYDENYNELADIYSFGMCMLEMVT 206
+GT +MAPE +DIYSFG+ +LE++T
Sbjct: 196 VGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 21/221 (9%)
Query: 53 LERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSG-SLRQYRXXXXXXXXX 111
L ++ E+ +L ++H NII+ + I + ++ E SG L +
Sbjct: 73 LGKVTLEIAILSRVEHANIIKVLD--IFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEP 130
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANA-K 170
RQ++S + YL D IIHRD+K +NI I +K+ D G A +E+
Sbjct: 131 LASYIFRQLVSAVGYLRLKD--IIHRDIKDENIVI-AEDFTIKLIDFGSAAYLERGKLFY 187
Query: 171 SVIGTPEFMAPELYDEN-YN--ELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSG 227
+ GT E+ APE+ N Y EL +++S G+ + +V E P+ E + V +
Sbjct: 188 TFCGTIEYCAPEVLMGNPYRGPEL-EMWSLGVTLYTLVFEENPFCELEET------VEAA 240
Query: 228 IKPAALSKVKDPEVKSFIEKCLVPASQRLSAKE-LLMDPFL 267
I P L E+ S + L P +R + E L+ DP++
Sbjct: 241 IHPPYLV---SKELMSLVSGLLQPVPERRTTLEKLVTDPWV 278
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 117 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ----ANAKSV 172
A+ +G+ +LH + IHRD+K NI ++ KI D GLA E+ +
Sbjct: 133 AQGAANGINFLHENHH--IHRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVMXXRI 189
Query: 173 IGTPEFMAPELYDENYNELADIYSFGMCMLEMVT 206
+GT +MAPE +DIYSFG+ +LE++T
Sbjct: 190 VGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 223
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWA 117
+E+ +L +KH NI+ + I + + +I +L + G L
Sbjct: 65 NEIAVLHKIKHPNIVALDD--IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI 122
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFING--NQGEVKIGDLGLATIMEQANAKS-VIG 174
Q+L + YLH D I+HRDLK +N+ ++ I D GL+ + + + S G
Sbjct: 123 FQVLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Query: 175 TPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 224
TP ++APE L + Y++ D +S G+ ++ P+ + N A++++++
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD-ENDAKLFEQI 230
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX-- 111
E E ++K L+H +++ Y + + I+TE GSL +
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP 111
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANA 169
+ QI SG+ Y+ + +HRDL+ NI + G K+ D GLA ++E + A
Sbjct: 112 QLVDMSAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEWTA 168
Query: 170 KSVIGTP-EFMAPE--LYDENYNELADIYSFGMCMLEMVT 206
+ P ++ APE LY + +D++SFG+ + E+ T
Sbjct: 169 RQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTT 207
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + IITE T G+L
Sbjct: 287 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLD 344
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHR+L N + N VK+ D
Sbjct: 345 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENH-LVKVADF 401
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 402 GLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 454
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX-- 111
E E ++K L+H +++ Y + + I+TE GSL +
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP 111
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANA 169
+ QI SG+ Y+ + +HRDL+ NI + G K+ D GLA ++E + A
Sbjct: 112 QLVDMSAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTA 168
Query: 170 KSVIGTP-EFMAPE--LYDENYNELADIYSFGMCMLEMVT 206
+ P ++ APE LY + +D++SFG+ + E+ T
Sbjct: 169 RQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTT 207
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 13/212 (6%)
Query: 21 DTSGYKAFDEVNGLEVAWCQVRIDDVLQSPEDLE----RLYSEVHLLKSLKHNNIIRFYN 76
D G AF EV E Q + + E LE + +E+ +L +KH NI+ +
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 77 SWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIH 136
I + + +I +L + G L Q+L + YLH D I+H
Sbjct: 84 --IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH--DLGIVH 139
Query: 137 RDLKCDNIFING--NQGEVKIGDLGLATIMEQANAKS-VIGTPEFMAPE-LYDENYNELA 192
RDLK +N+ ++ I D GL+ + + + S GTP ++APE L + Y++
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 193 DIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 224
D +S G+ ++ P+ + N A++++++
Sbjct: 200 DCWSIGVIAYILLCGYPPFYD-ENDAKLFEQI 230
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX-- 111
E E ++K L+H +++ Y + + I+TE + GSL +
Sbjct: 225 EAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 281
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANA 169
A QI SG+ Y+ + +HRDL+ NI + G K+ D GL ++E + A
Sbjct: 282 QLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLGRLIEDNEYTA 338
Query: 170 KSVIGTP-EFMAPE--LYDENYNELADIYSFGMCMLEMVT 206
+ P ++ APE LY + +D++SFG+ + E+ T
Sbjct: 339 RQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTT 377
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 11/153 (7%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 118
E+ LLK L H NI+ + + + + ++ E + +
Sbjct: 69 EISLLKELHHPNIVSLID--VIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLY 126
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGT 175
Q+L G+ + H H I+HRDLK N+ IN + G +K+ D GLA I ++ V+ T
Sbjct: 127 QLLRGVAHCHQHR--ILHRDLKPQNLLINSD-GALKLADFGLARAFGIPVRSYTHEVV-T 182
Query: 176 PEFMAPELY--DENYNELADIYSFGMCMLEMVT 206
+ AP++ + Y+ DI+S G EM+T
Sbjct: 183 LWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT 215
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 36/176 (20%)
Query: 60 VHLLKSLKHNNIIRFYNSWIDDQNKTVN------IITELFTSGSLRQYRXXXXXXXXXXX 113
++ + ++H+NI RF + D+ T + ++ E + +GSL +Y
Sbjct: 58 IYRVPLMEHDNIARFI---VGDERVTADGRMEYLLVMEYYPNGSLXKY-LSLHTSDWVSS 113
Query: 114 XGWARQILSGLIYLHS-------HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM-- 164
A + GL YLH+ + P I HRDL N+ + N G I D GL+ +
Sbjct: 114 CRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVK-NDGTCVISDFGLSMRLTG 172
Query: 165 -------EQANAK-SVIGTPEFMAPELYDENYN--------ELADIYSFGMCMLEM 204
E+ NA S +GT +MAPE+ + N + D+Y+ G+ E+
Sbjct: 173 NRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX-- 111
E E ++K L+H +++ Y + + I+ E + GSL +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANA 169
A QI SG+ Y+ + +HRDL+ NI + G K+ D GLA ++E + A
Sbjct: 115 QLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTA 171
Query: 170 KSVIGTP-EFMAPE--LYDENYNELADIYSFGMCMLEMVT 206
+ P ++ APE LY + +D++SFG+ + E+ T
Sbjct: 172 RQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTT 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX-- 111
E E ++K L+H +++ Y + + I+ E + GSL +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANA 169
A QI SG+ Y+ + +HRDL+ NI + G K+ D GLA ++E + A
Sbjct: 115 QLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTA 171
Query: 170 KSVIGTP-EFMAPE--LYDENYNELADIYSFGMCMLEMVT 206
+ P ++ APE LY + +D++SFG+ + E+ T
Sbjct: 172 RQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTT 210
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + II E T G+L
Sbjct: 39 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIIIEFMTYGNLLD 96
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHRDL N + N VK+ D
Sbjct: 97 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADF 153
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 154 GLSRLMTGDTXTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 206
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 11/153 (7%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 118
E+ LLK L H NI+ + + + + ++ E + +
Sbjct: 69 EISLLKELHHPNIVSLID--VIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLY 126
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT---IMEQANAKSVIGT 175
Q+L G+ + H H I+HRDLK N+ IN + G +K+ D GLA I ++ V+ T
Sbjct: 127 QLLRGVAHCHQHR--ILHRDLKPQNLLINSD-GALKLADFGLARAFGIPVRSYTHEVV-T 182
Query: 176 PEFMAPELY--DENYNELADIYSFGMCMLEMVT 206
+ AP++ + Y+ DI+S G EM+T
Sbjct: 183 LWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT 215
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + IITE T G+L
Sbjct: 245 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLD 302
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHR+L N + N VK+ D
Sbjct: 303 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENH-LVKVADF 359
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 360 GLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 412
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 15/176 (8%)
Query: 40 QVRIDDVLQSPEDLERLYSEVHLLKSLKHNNII---RFYNSWIDDQNKT-VNIITELFTS 95
+V I VLQ R E+ +++ +KH N++ F+ S D +++ +N++ E
Sbjct: 66 EVAIKKVLQDKRFKNR---ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE 122
Query: 96 G---SLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE 152
+ R Y + Q+L L Y+HS I HRD+K N+ ++ G
Sbjct: 123 TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG--ICHRDIKPQNLLLDPPSGV 180
Query: 153 VKIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 205
+K+ D G A I+ S I + + APEL NY DI+S G M E++
Sbjct: 181 LKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELM 236
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + II E T G+L
Sbjct: 41 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIIIEFMTYGNLLD 98
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHRDL N + N VK+ D
Sbjct: 99 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADF 155
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 156 GLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + II E T G+L
Sbjct: 42 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIIIEFMTYGNLLD 99
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHRDL N + N VK+ D
Sbjct: 100 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADF 156
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 157 GLSRLMTGDTXTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 209
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX-- 111
E E ++K L+H +++ Y + + I+ E + GSL +
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLP 280
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANA 169
A QI SG+ Y+ + +HRDL+ NI + G K+ D GLA ++E + A
Sbjct: 281 QLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTA 337
Query: 170 KSVIGTP-EFMAPE--LYDENYNELADIYSFGMCMLEMVT 206
+ P ++ APE LY + +D++SFG+ + E+ T
Sbjct: 338 RQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTT 376
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + II E T G+L
Sbjct: 41 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIIIEFMTYGNLLD 98
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHRDL N + N VK+ D
Sbjct: 99 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADF 155
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 156 GLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 12/157 (7%)
Query: 65 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 124
L I+ Y + + VNI EL GSL Q + Q L GL
Sbjct: 106 GLSSPRIVPLYGA--VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGL 163
Query: 125 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME-QANAKSVI------GTPE 177
YLH+ I+H D+K DN+ ++ + + D G A ++ KS++ GT
Sbjct: 164 EYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET 221
Query: 178 FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSE 213
MAPE + + + DI+S ML M+ +P+++
Sbjct: 222 HMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 258
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + + II E T G+L
Sbjct: 46 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIIIEFMTYGNLLD 103
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHRDL N + N VK+ D
Sbjct: 104 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADF 160
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 161 GLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 213
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 12/157 (7%)
Query: 65 SLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGL 124
L I+ Y + + VNI EL GSL Q + Q L GL
Sbjct: 122 GLSSPRIVPLYGA--VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGL 179
Query: 125 IYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME-QANAKSVI------GTPE 177
YLH+ I+H D+K DN+ ++ + + D G A ++ KS++ GT
Sbjct: 180 EYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET 237
Query: 178 FMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSE 213
MAPE + + + DI+S ML M+ +P+++
Sbjct: 238 HMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 274
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 94/242 (38%), Gaps = 44/242 (18%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNI--ITELFTSGSLRQYRXXXXXXXXXXXXGW 116
E+ +KH N+++F + N V + IT GSL Y
Sbjct: 59 EIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHV- 117
Query: 117 ARQILSGLIYLH---------SHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME-- 165
A + GL YLH H P I HRD K N+ + + V + D GLA E
Sbjct: 118 AETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAV-LADFGLAVRFEPG 176
Query: 166 --QANAKSVIGTPEFMAPELYDE--NYNELA----DIYSFGMCMLEMVT----------- 206
+ +GT +MAPE+ + N+ A D+Y+ G+ + E+V+
Sbjct: 177 KPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDE 236
Query: 207 ----FE-----YPYSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCL-VPASQRL 256
FE +P E ++KK+ IK L ++ IE+C A RL
Sbjct: 237 YMLPFEEEIGQHPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEARL 296
Query: 257 SA 258
SA
Sbjct: 297 SA 298
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 40 QVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGS 97
+V I V ++ ER+ +E ++K ++++R + Q + +I EL T G
Sbjct: 42 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG--VVSQGQPTLVIMELMTRGD 99
Query: 98 LRQY----------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFIN 147
L+ Y A +I G+ YL+++ +HRDL N +
Sbjct: 100 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMV- 156
Query: 148 GNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCM 201
VKIGD G+ T + K ++ +M+PE L D + +D++SFG+ +
Sbjct: 157 AEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV-RWMSPESLKDGVFTTYSDVWSFGVVL 215
Query: 202 LEMVTF-EYPYSECRNSAQIYKKVSSG 227
E+ T E PY N Q+ + V G
Sbjct: 216 WEIATLAEQPYQGLSNE-QVLRFVMEG 241
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS-----VI 173
QIL GL Y+HS + ++HRDLK N+ IN ++KI D GLA I + + + +
Sbjct: 152 QILRGLKYIHSAN--VLHRDLKPSNLLIN-TTCDLKICDFGLARIADPEHDHTGFLTEXV 208
Query: 174 GTPEFMAPE--LYDENYNELADIYSFGMCMLEMVT 206
T + APE L + Y + DI+S G + EM++
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 40 QVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGS 97
+V I V ++ ER+ +E ++K ++++R + Q + +I EL T G
Sbjct: 51 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG--VVSQGQPTLVIMELMTRGD 108
Query: 98 LRQY----------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFIN 147
L+ Y A +I G+ YL+++ +HRDL N +
Sbjct: 109 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMV- 165
Query: 148 GNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCM 201
VKIGD G+ T + K ++ +M+PE L D + +D++SFG+ +
Sbjct: 166 AEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV-RWMSPESLKDGVFTTYSDVWSFGVVL 224
Query: 202 LEMVTF-EYPYSECRNSAQIYKKVSSG 227
E+ T E PY N Q+ + V G
Sbjct: 225 WEIATLAEQPYQGLSNE-QVLRFVMEG 250
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 10/136 (7%)
Query: 86 VNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIF 145
VNI EL GSL Q + Q L GL YLH+ I+H D+K DN+
Sbjct: 139 VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR--ILHGDVKADNVL 196
Query: 146 INGNQGEVKIGDLGLATIME-QANAKSVI------GTPEFMAPE-LYDENYNELADIYSF 197
++ + + D G A ++ KS++ GT MAPE + + + DI+S
Sbjct: 197 LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSS 256
Query: 198 GMCMLEMVTFEYPYSE 213
ML M+ +P+++
Sbjct: 257 CCMMLHMLNGCHPWTQ 272
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 117 ARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ----ANAKSV 172
A+ +G+ +LH + IHRD+K NI ++ KI D GLA E+ +
Sbjct: 130 AQGAANGINFLHENHH--IHRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVXXSRI 186
Query: 173 IGTPEFMAPELYDENYNELADIYSFGMCMLEMVT 206
+GT + APE +DIYSFG+ +LE++T
Sbjct: 187 VGTTAYXAPEALRGEITPKSDIYSFGVVLLEIIT 220
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 40 QVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGS 97
+V I V ++ ER+ +E ++K ++++R + Q + +I EL T G
Sbjct: 57 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG--VVSQGQPTLVIMELMTRGD 114
Query: 98 LRQYRXXXXXXXX----------XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFIN 147
L+ Y A +I G+ YL+++ +HRDL N +
Sbjct: 115 LKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMV- 171
Query: 148 GNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCM 201
VKIGD G+ T + K ++ +M+PE L D + +D++SFG+ +
Sbjct: 172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWMSPESLKDGVFTTYSDVWSFGVVL 230
Query: 202 LEMVTF-EYPYSECRNSAQIYKKVSSG 227
E+ T E PY N Q+ + V G
Sbjct: 231 WEIATLAEQPYQGLSNE-QVLRFVMEG 256
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 17/190 (8%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQS-PEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQN 83
YKA D V VA ++R++ + P R EV LLK L+H NII + + N
Sbjct: 51 YKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR---EVSLLKELQHRNIIELKS--VIHHN 105
Query: 84 KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDN 143
+++I E + L++Y + Q+++G+ + HS +HRDLK N
Sbjct: 106 HRLHLIFE-YAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR--CLHRDLKPQN 162
Query: 144 IFINGNQGE----VKIGDLGLATI--MEQANAKSVIGTPEFMAPE--LYDENYNELADIY 195
+ ++ + +KIGD GLA + I T + PE L +Y+ DI+
Sbjct: 163 LLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIW 222
Query: 196 SFGMCMLEMV 205
S EM+
Sbjct: 223 SIACIWAEML 232
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 15/230 (6%)
Query: 26 KAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNK 84
KA+D V E W ++I + L + EV LL+ + KH+ +++Y +
Sbjct: 53 KAYDRV---EQEWVAIKI--IKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 107
Query: 85 TVNIITELFTSGSLRQY----RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLK 140
N + +F S Y +A+Q+ + L++L + + IIH DLK
Sbjct: 108 FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLK 167
Query: 141 CDNIFI-NGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFG 198
+NI + N + +KI D G + + Q I + + +PE L Y+ D++S G
Sbjct: 168 PENILLCNPKRSAIKIVDFGSSCQLGQ-RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLG 226
Query: 199 MCMLEMVTFEYPYSECRNSAQIYKKVSS-GIKPAALSKVKDPEVKSFIEK 247
++EM T E +S Q+ K V GI PA + + P+ + F EK
Sbjct: 227 CILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD-QAPKARKFFEK 275
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 41 VRIDDVLQSPED-LERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLR 99
+R+ D+ + ED L+ EV + +H N++ F + + + + IIT L +L
Sbjct: 60 IRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH--LAIITSLCKGRTLY 117
Query: 100 QY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
R A++I+ G+ YLH+ I+H+DLK N+F + G+V I D
Sbjct: 118 SVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG--ILHKDLKSKNVFY--DNGKVVITDF 173
Query: 159 GLATI--MEQANAKS-----VIGTPEFMAPELYDE----------NYNELADIYSFGMCM 201
GL +I + QA + G +APE+ + +++ +D+++ G
Sbjct: 174 GLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIW 233
Query: 202 LEMVTFEYPYSECRNSAQIYKKVSSGIKP 230
E+ E+P+ A I+ ++ +G+KP
Sbjct: 234 YELHAREWPFKTQPAEAIIW-QMGTGMKP 261
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 15/230 (6%)
Query: 26 KAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNK 84
KA+D V E W ++I + L + EV LL+ + KH+ +++Y +
Sbjct: 72 KAYDRV---EQEWVAIKI--IKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 126
Query: 85 TVNIITELFTSGSLRQY----RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLK 140
N + +F S Y +A+Q+ + L++L + + IIH DLK
Sbjct: 127 FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLK 186
Query: 141 CDNIFI-NGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFG 198
+NI + N + +KI D G + + Q I + + +PE L Y+ D++S G
Sbjct: 187 PENILLCNPKRSAIKIVDFGSSCQLGQ-RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLG 245
Query: 199 MCMLEMVTFEYPYSECRNSAQIYKKVSS-GIKPAALSKVKDPEVKSFIEK 247
++EM T E +S Q+ K V GI PA + + P+ + F EK
Sbjct: 246 CILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD-QAPKARKFFEK 294
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX-- 111
E E ++K L+H +++ Y + + I+ E + G L +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAV---VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLP 114
Query: 112 XXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME--QANA 169
A QI SG+ Y+ + +HRDL+ NI + G K+ D GLA ++E + A
Sbjct: 115 QLVDMAAQIASGMAYVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTA 171
Query: 170 KSVIGTP-EFMAPE--LYDENYNELADIYSFGMCMLEMVT 206
+ P ++ APE LY + +D++SFG+ + E+ T
Sbjct: 172 RQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTT 210
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 40 QVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGS 97
+V I V ++ ER+ +E ++K ++++R + Q + +I EL T G
Sbjct: 47 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG--VVSQGQPTLVIMELMTRGD 104
Query: 98 LRQYRXXXXXXXX----------XXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFIN 147
L+ Y A +I G+ YL+++ +HRDL N +
Sbjct: 105 LKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMV- 161
Query: 148 GNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCM 201
VKIGD G+ T + K ++ +M+PE L D + +D++SFG+ +
Sbjct: 162 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWMSPESLKDGVFTTYSDVWSFGVVL 220
Query: 202 LEMVTF-EYPYSECRNSAQIYKKVSSG 227
E+ T E PY N Q+ + V G
Sbjct: 221 WEIATLAEQPYQGLSNE-QVLRFVMEG 246
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 40 QVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGS 97
+V I V ++ ER+ +E ++K ++++R + Q + +I EL T G
Sbjct: 57 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG--VVSQGQPTLVIMELMTRGD 114
Query: 98 LRQY----------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFIN 147
L+ Y A +I G+ YL+++ +HRDL N +
Sbjct: 115 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMV- 171
Query: 148 GNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCM 201
VKIGD G+ T + K ++ +M+PE L D + +D++SFG+ +
Sbjct: 172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWMSPESLKDGVFTTYSDVWSFGVVL 230
Query: 202 LEMVTF-EYPYSECRNSAQIYKKVSSG 227
E+ T E PY N Q+ + V G
Sbjct: 231 WEIATLAEQPYQGLSNE-QVLRFVMEG 256
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
Query: 67 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSL-----RQYRXXXXXXXXXXXXGWARQIL 121
+H++++R++++W +D + + E GSL YR Q+
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAELKD-LLLQVG 123
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFIN------------------GNQGEVKIGDLGLATI 163
GL Y+HS ++H D+K NIFI+ N+ KIGDLG T
Sbjct: 124 RGLRYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR 181
Query: 164 MEQANAKSVIGTPEFMAPELYDENYNEL--ADIYSFGMCML 202
+ + G F+A E+ ENY L ADI++ + ++
Sbjct: 182 ISSPQVEE--GDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 58/108 (53%), Gaps = 15/108 (13%)
Query: 116 WAR----QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ---AN 168
WA+ +++ L +HS +IHRD+K DN+ ++ G +K+ D G M++ +
Sbjct: 175 WAKFYTAEVVLALDAIHSMG--LIHRDVKPDNMLLD-KHGHLKLADFGTCMKMDETGMVH 231
Query: 169 AKSVIGTPEFMAPELY-----DENYNELADIYSFGMCMLEMVTFEYPY 211
+ +GTP++++PE+ D Y D +S G+ + EM+ + P+
Sbjct: 232 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 40 QVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGS 97
+V I V ++ ER+ +E ++K ++++R + Q + +I EL T G
Sbjct: 44 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG--VVSQGQPTLVIMELMTRGD 101
Query: 98 LRQY----------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFIN 147
L+ Y A +I G+ YL+++ +HRDL N +
Sbjct: 102 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMV- 158
Query: 148 GNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCM 201
VKIGD G+ T + K ++ +M+PE L D + +D++SFG+ +
Sbjct: 159 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWMSPESLKDGVFTTYSDVWSFGVVL 217
Query: 202 LEMVTF-EYPYSECRNSAQIYKKVSSG 227
E+ T E PY N Q+ + V G
Sbjct: 218 WEIATLAEQPYQGLSNE-QVLRFVMEG 243
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 40 QVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGS 97
+V I V ++ ER+ +E ++K ++++R + Q + +I EL T G
Sbjct: 48 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG--VVSQGQPTLVIMELMTRGD 105
Query: 98 LRQY----------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFIN 147
L+ Y A +I G+ YL+++ +HRDL N +
Sbjct: 106 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMV- 162
Query: 148 GNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCM 201
VKIGD G+ T + K ++ +M+PE L D + +D++SFG+ +
Sbjct: 163 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWMSPESLKDGVFTTYSDVWSFGVVL 221
Query: 202 LEMVTF-EYPYSECRNSAQIYKKVSSG 227
E+ T E PY N Q+ + V G
Sbjct: 222 WEIATLAEQPYQGLSNE-QVLRFVMEG 247
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
Query: 67 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSL-----RQYRXXXXXXXXXXXXGWARQIL 121
+H++++R++++W +D + + E GSL YR Q+
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAELKD-LLLQVG 121
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFIN------------------GNQGEVKIGDLGLATI 163
GL Y+HS ++H D+K NIFI+ N+ KIGDLG T
Sbjct: 122 RGLRYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR 179
Query: 164 MEQANAKSVIGTPEFMAPELYDENYNEL--ADIYSFGMCML 202
+ + G F+A E+ ENY L ADI++ + ++
Sbjct: 180 ISSPQVEE--GDSRFLANEVLQENYTHLPKADIFALALTVV 218
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
Query: 67 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSL-----RQYRXXXXXXXXXXXXGWARQIL 121
+H++++R++++W +D + + E GSL YR Q+
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAELKD-LLLQVG 123
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFIN------------------GNQGEVKIGDLGLATI 163
GL Y+HS ++H D+K NIFI+ N+ KIGDLG T
Sbjct: 124 RGLRYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR 181
Query: 164 MEQANAKSVIGTPEFMAPELYDENYNEL--ADIYSFGMCML 202
+ + G F+A E+ ENY L ADI++ + ++
Sbjct: 182 ISSPQVEE--GDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
Query: 67 KHNNIIRFYNSWIDDQNKTVNIITELFTSGSL-----RQYRXXXXXXXXXXXXGWARQIL 121
+H++++R++++W +D + + E GSL YR Q+
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAELKD-LLLQVG 125
Query: 122 SGLIYLHSHDPPIIHRDLKCDNIFIN------------------GNQGEVKIGDLGLATI 163
GL Y+HS ++H D+K NIFI+ N+ KIGDLG T
Sbjct: 126 RGLRYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR 183
Query: 164 MEQANAKSVIGTPEFMAPELYDENYNEL--ADIYSFGMCML 202
+ + G F+A E+ ENY L ADI++ + ++
Sbjct: 184 ISSPQVEE--GDSRFLANEVLQENYTHLPKADIFALALTVV 222
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 40 QVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGS 97
+V I V ++ ER+ +E ++K ++++R + Q + +I EL T G
Sbjct: 51 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG--VVSQGQPTLVIMELMTRGD 108
Query: 98 LRQY----------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFIN 147
L+ Y A +I G+ YL+++ +HRDL N +
Sbjct: 109 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMV- 165
Query: 148 GNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCM 201
VKIGD G+ T + K ++ +M+PE L D + +D++SFG+ +
Sbjct: 166 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWMSPESLKDGVFTTYSDVWSFGVVL 224
Query: 202 LEMVTF-EYPYSECRNSAQIYKKVSSG 227
E+ T E PY N Q+ + V G
Sbjct: 225 WEIATLAEQPYQGLSNE-QVLRFVMEG 250
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 15/230 (6%)
Query: 26 KAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSL-KHNNIIRFYNSWIDDQNK 84
KA+D V E W ++I + L + EV LL+ + KH+ +++Y +
Sbjct: 72 KAYDRV---EQEWVAIKI--IKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 126
Query: 85 TVNIITELFTSGSLRQY----RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLK 140
N + +F S Y +A+Q+ + L++L + + IIH DLK
Sbjct: 127 FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLK 186
Query: 141 CDNIFI-NGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFG 198
+NI + N + +KI D G + + Q I + + +PE L Y+ D++S G
Sbjct: 187 PENILLCNPKRXAIKIVDFGSSCQLGQ-RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLG 245
Query: 199 MCMLEMVTFEYPYSECRNSAQIYKKVSS-GIKPAALSKVKDPEVKSFIEK 247
++EM T E +S Q+ K V GI PA + + P+ + F EK
Sbjct: 246 CILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD-QAPKARKFFEK 294
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 40 QVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGS 97
+V I V ++ ER+ +E ++K ++++R + Q + +I EL T G
Sbjct: 50 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG--VVSQGQPTLVIMELMTRGD 107
Query: 98 LRQY----------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFIN 147
L+ Y A +I G+ YL+++ +HRDL N +
Sbjct: 108 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMV- 164
Query: 148 GNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCM 201
VKIGD G+ T + K ++ +M+PE L D + +D++SFG+ +
Sbjct: 165 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWMSPESLKDGVFTTYSDVWSFGVVL 223
Query: 202 LEMVTF-EYPYSECRNSAQIYKKVSSG 227
E+ T E PY N Q+ + V G
Sbjct: 224 WEIATLAEQPYQGLSNE-QVLRFVMEG 249
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 12/165 (7%)
Query: 49 SPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
SP+ + + E +++ + + R + TV ++T+L G L + R
Sbjct: 59 SPKANKEILDEAYVMAGVGSPYVSRLLGICL---TSTVQLVTQLMPYGCLLDHVRENRGR 115
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIME-- 165
W QI G+ YL D ++HRDL N+ + + VKI D GLA +++
Sbjct: 116 LGSQDLLNWCMQIAKGMSYLE--DVRLVHRDLAARNVLVK-SPNHVKITDFGLARLLDID 172
Query: 166 --QANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF 207
+ +A ++MA E + + +D++S+G+ + E++TF
Sbjct: 173 ETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTF 217
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 40 QVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGS 97
+V I V ++ ER+ +E ++K ++++R + Q + +I EL T G
Sbjct: 50 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG--VVSQGQPTLVIMELMTRGD 107
Query: 98 LRQY----------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFIN 147
L+ Y A +I G+ YL+++ +HRDL N +
Sbjct: 108 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMV- 164
Query: 148 GNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCM 201
VKIGD G+ T + K ++ +M+PE L D + +D++SFG+ +
Sbjct: 165 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWMSPESLKDGVFTTYSDVWSFGVVL 223
Query: 202 LEMVTF-EYPYSECRNSAQIYKKVSSG 227
E+ T E PY N Q+ + V G
Sbjct: 224 WEIATLAEQPYQGLSNE-QVLRFVMEG 249
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 17/198 (8%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ 100
V + + + ++E E ++K +KH N+++ + I+TE G+L
Sbjct: 60 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG--VCTLEPPFYIVTEYMPYGNLLD 117
Query: 101 Y--RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
Y A QI S + YL + IHRDL N + N VK+ D
Sbjct: 118 YLRECNREEVTAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-VVKVADF 174
Query: 159 GLATIM------EQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPY 211
GL+ +M A AK I ++ APE L ++ +D+++FG+ + E+ T+
Sbjct: 175 GLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSP 231
Query: 212 SECRNSAQIYKKVSSGIK 229
+ +Q+Y + G +
Sbjct: 232 YPGIDLSQVYDLLEKGYR 249
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR----FYNSWIDDQNKTVNIITELFTSG 96
V I VLQ R E+ +++ L H NI+R FY+S +N++ +
Sbjct: 82 VAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 138
Query: 97 SLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Y + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 139 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 196
Query: 154 KIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 205
K+ D G A + + S I + + APEL +Y D++S G + E++
Sbjct: 197 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 15/175 (8%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR----FYNSWIDDQNKTVNIITELFTSG 96
V I VLQ R E+ +++ L H NI+R FY+S +N++ + +
Sbjct: 48 VAIKKVLQGKAFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPAT 104
Query: 97 SLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Y + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 105 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 162
Query: 154 KIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 205
K+ D G A + + S I + + APEL +Y D++S G + E++
Sbjct: 163 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR----FYNSWIDDQNKTVNIITELFTSG 96
V I VLQ R E+ +++ L H NI+R FY+S +N++ +
Sbjct: 86 VAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 142
Query: 97 SLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Y + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 143 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 200
Query: 154 KIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 205
K+ D G A + + S I + + APEL +Y D++S G + E++
Sbjct: 201 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 255
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR----FYNSWIDDQNKTVNIITELFTSG 96
V I VLQ R E+ +++ L H NI+R FY+S +N++ +
Sbjct: 82 VAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 138
Query: 97 SLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Y + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 139 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 196
Query: 154 KIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 205
K+ D G A + + S I + + APEL +Y D++S G + E++
Sbjct: 197 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 24/184 (13%)
Query: 56 LYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXG 115
+ E LL +L+H +I++FY ++ + ++ E G L ++ G
Sbjct: 62 FHREAELLTNLQHEHIVKFYGVCVE--GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEG 119
Query: 116 -------------WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT 162
A+QI +G++YL S +HRDL N + G VKIGD G++
Sbjct: 120 NPPTELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLV-GENLLVKIGDFGMSR 176
Query: 163 IMEQANAKSVIGTP----EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRN 216
+ + V G +M PE + + +D++S G+ + E+ T+ + P+ + N
Sbjct: 177 DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN 236
Query: 217 SAQI 220
+ I
Sbjct: 237 NEVI 240
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR----FYNSWIDDQNKTVNIITELFTSG 96
V I VLQ R E+ +++ L H NI+R FY+S +N++ +
Sbjct: 84 VAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 140
Query: 97 SLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Y + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 141 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 198
Query: 154 KIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 205
K+ D G A + + S I + + APEL +Y D++S G + E++
Sbjct: 199 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 253
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR----FYNSWIDDQNKTVNIITELFTSG 96
V I VLQ R E+ +++ L H NI+R FY+S +N++ +
Sbjct: 76 VAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 132
Query: 97 SLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Y + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 133 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 190
Query: 154 KIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 205
K+ D G A + + S I + + APEL +Y D++S G + E++
Sbjct: 191 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 245
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 96/229 (41%), Gaps = 22/229 (9%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW-- 116
E +LK L H NI++ + + + +I E GSL +
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 117 -ARQILSGLIYLHSHDPPIIHRDLKCDNIF-INGNQGE--VKIGDLGLATIME-QANAKS 171
R ++ G+ +L + I+HR++K NI + G G+ K+ D G A +E S
Sbjct: 117 VLRDVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS 174
Query: 172 VIGTPEFMAPELYD---------ENYNELADIYSFGMCMLEMVTFEYPYSEC---RNSAQ 219
+ GT E++ P++Y+ + Y D++S G+ T P+ R + +
Sbjct: 175 LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKE 234
Query: 220 IYKKVSSGIKPAALSKVKDPEVKSFIEKCLVPASQRLS-AKELLMDPFL 267
+ K+ +G A+S V+ E +P S LS ++L+ P L
Sbjct: 235 VMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVL 283
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR----FYNSWIDDQNKTVNIITELFTSG 96
V I VLQ R E+ +++ L H NI+R FY+S +N++ +
Sbjct: 127 VAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 183
Query: 97 SLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Y + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 184 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 241
Query: 154 KIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 205
K+ D G A + + S I + + APEL +Y D++S G + E++
Sbjct: 242 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 296
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIMEQANAKSVIGT 175
R I + + +LHSH+ I HRD+K +N+ + + +K+ D G A Q ++ T
Sbjct: 116 RDIGTAIQFLHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYT 173
Query: 176 PEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALS 234
P ++APE L E Y++ D++S G+ M ++ P+ Y I P
Sbjct: 174 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF---------YSNTGQAISPGMKR 224
Query: 235 KVK-------DPE-------VKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPL 278
+++ +PE K I L ++RL+ + + P++ + PL
Sbjct: 225 RIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPL 283
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 40 QVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGS 97
+V I V ++ ER+ +E ++K ++++R + Q + +I EL T G
Sbjct: 44 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG--VVSQGQPTLVIMELMTRGD 101
Query: 98 LRQY----------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFIN 147
L+ Y A +I G+ YL+++ +HRDL N +
Sbjct: 102 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCXV- 158
Query: 148 GNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCM 201
VKIGD G+ T + K ++ +M+PE L D + +D++SFG+ +
Sbjct: 159 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWMSPESLKDGVFTTYSDVWSFGVVL 217
Query: 202 LEMVTF-EYPYSECRNSAQIYKKVSSG 227
E+ T E PY N Q+ + V G
Sbjct: 218 WEIATLAEQPYQGLSNE-QVLRFVMEG 243
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE--VKIGDLGLATIMEQANAKSVIGT 175
R I + + +LHSH+ I HRD+K +N+ + + +K+ D G A Q ++ T
Sbjct: 135 RDIGTAIQFLHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYT 192
Query: 176 PEFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALS 234
P ++APE L E Y++ D++S G+ M ++ P+ Y I P
Sbjct: 193 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF---------YSNTGQAISPGMKR 243
Query: 235 KVK-------DPE-------VKSFIEKCL-VPASQRLSAKELLMDPFLQVNGTTKNRPL 278
+++ +PE K I L ++RL+ + + P++ + PL
Sbjct: 244 RIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPL 302
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 32/156 (20%)
Query: 123 GLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA---TIMEQANAKSVI-GTPEF 178
GL YLH+ IIHRD+K NI ++ N KI D G++ T ++Q + V+ GT +
Sbjct: 151 GLHYLHTR--AIIHRDVKSINILLDENFVP-KITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 179 MAPELYDEN-YNELADIYSFGMCML---------------EMVTFEYPYSECRNSAQIYK 222
+ PE + + E +D+YSFG+ + EMV E N+ Q+ +
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 223 KV----SSGIKPAALSKVKDPEVKSFIEKCLVPASQ 254
V + I+P +L K D V KCL +S+
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAV-----KCLALSSE 298
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR----FYNSWIDDQNKTVNIITELFTSG 96
V I VLQ R E+ +++ L H NI+R FY+S +N++ +
Sbjct: 56 VAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 112
Query: 97 SLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Y + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 113 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 170
Query: 154 KIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 205
K+ D G A + + S I + + APEL +Y D++S G + E++
Sbjct: 171 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 225
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR----FYNSWIDDQNKTVNIITELFTSG 96
V I VLQ R E+ +++ L H NI+R FY+S +N++ +
Sbjct: 60 VAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 116
Query: 97 SLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Y + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 117 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 174
Query: 154 KIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 205
K+ D G A + + S I + + APEL +Y D++S G + E++
Sbjct: 175 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR----FYNSWIDDQNKTVNIITELFTSG 96
V I VLQ R E+ +++ L H NI+R FY+S +N++ +
Sbjct: 53 VAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 109
Query: 97 SLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Y + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 110 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 167
Query: 154 KIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 205
K+ D G A + + S I + + APEL +Y D++S G + E++
Sbjct: 168 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 222
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR----FYNSWIDDQNKTVNIITELFTSG 96
V I VLQ R E+ +++ L H NI+R FY+S +N++ +
Sbjct: 67 VAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 123
Query: 97 SLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Y + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 124 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 181
Query: 154 KIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 205
K+ D G A + + S I + + APEL +Y D++S G + E++
Sbjct: 182 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 236
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR----FYNSWIDDQNKTVNIITELFTSG 96
V I VLQ R E+ +++ L H NI+R FY+S +N++ +
Sbjct: 61 VAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 117
Query: 97 SLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Y + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 118 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 175
Query: 154 KIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 205
K+ D G A + + S I + + APEL +Y D++S G + E++
Sbjct: 176 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 230
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 40 QVRIDDVLQSPEDLERL--YSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGS 97
+V I V ++ ER+ +E ++K ++++R + Q + +I EL T G
Sbjct: 79 RVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG--VVSQGQPTLVIMELMTRGD 136
Query: 98 LRQY----------RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFIN 147
L+ Y A +I G+ YL+++ +HRDL N +
Sbjct: 137 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMV- 193
Query: 148 GNQGEVKIGDLGLA-----TIMEQANAKSVIGTPEFMAPE-LYDENYNELADIYSFGMCM 201
VKIGD G+ T + K ++ +M+PE L D + +D++SFG+ +
Sbjct: 194 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWMSPESLKDGVFTTYSDVWSFGVVL 252
Query: 202 LEMVTF-EYPYSECRNSAQIYKKVSSG 227
E+ T E PY N Q+ + V G
Sbjct: 253 WEIATLAEQPYQGLSNE-QVLRFVMEG 278
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR----FYNSWIDDQNKTVNIITELFTSG 96
V I VLQ R E+ +++ L H NI+R FY+S +N++ +
Sbjct: 60 VAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 116
Query: 97 SLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Y + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 117 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 174
Query: 154 KIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 205
K+ D G A + + S I + + APEL +Y D++S G + E++
Sbjct: 175 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 53/209 (25%)
Query: 120 ILSGLIYLHSHDPPIIHRDLKCDNIFI-NGNQ-GEVKIGDLGLATIMEQANAKSVIGTPE 177
+ S L +LH+ I HRDLK +NI + NQ VKI D GL + ++ S I TPE
Sbjct: 120 VASALDFLHNKG--IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPE 177
Query: 178 ---------FMAPELYDEN------YNELADIYSFGMCMLEMVTFEYPY-----SEC--- 214
+MAPE+ + Y++ D++S G+ + +++ P+ S+C
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD 237
Query: 215 RNSA------QIYKKVSSGIKPAALSKVKDPE---------VKSFIEKCLV-PASQRLSA 258
R A +++ + G K + P+ K I K LV A QRLSA
Sbjct: 238 RGEACPACQNMLFESIQEG-------KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSA 290
Query: 259 KELLMDPFLQVNGTTKNRPLPLPDIVLPR 287
++L P++Q G LP P +VL R
Sbjct: 291 AQVLQHPWVQ--GCAPENTLPTP-MVLQR 316
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 95/229 (41%), Gaps = 22/229 (9%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGW-- 116
E +LK L H NI++ + + + +I E GSL +
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 117 -ARQILSGLIYLHSHDPPIIHRDLKCDNIF-INGNQGE--VKIGDLGLATIME-QANAKS 171
R ++ G+ +L + I+HR++K NI + G G+ K+ D G A +E
Sbjct: 117 VLRDVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX 174
Query: 172 VIGTPEFMAPELYD---------ENYNELADIYSFGMCMLEMVTFEYPYSEC---RNSAQ 219
+ GT E++ P++Y+ + Y D++S G+ T P+ R + +
Sbjct: 175 LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKE 234
Query: 220 IYKKVSSGIKPAALSKVKDPEVKSFIEKCLVPASQRLS-AKELLMDPFL 267
+ K+ +G A+S V+ E +P S LS ++L+ P L
Sbjct: 235 VMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVL 283
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR----FYNSWIDDQNKTVNIITELFTSG 96
V I VLQ R E+ +++ L H NI+R FY+S +N++ +
Sbjct: 48 VAIKKVLQGKAFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 104
Query: 97 SLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Y + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 105 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 162
Query: 154 KIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 205
K+ D G A + + S I + + APEL +Y D++S G + E++
Sbjct: 163 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR----FYNSWIDDQNKTVNIITELFTSG 96
V I VLQ R E+ +++ L H NI+R FY+S +N++ +
Sbjct: 48 VAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 104
Query: 97 SLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Y + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 105 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 162
Query: 154 KIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 205
K+ D G A + + S I + + APEL +Y D++S G + E++
Sbjct: 163 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR----FYNSWIDDQNKTVNIITELFTSG 96
V I VLQ R E+ +++ L H NI+R FY+S +N++ +
Sbjct: 48 VAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 104
Query: 97 SLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Y + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 105 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 162
Query: 154 KIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 205
K+ D G A + + S I + + APEL +Y D++S G + E++
Sbjct: 163 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 116 WAR----QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ---AN 168
WAR +++ L +HS IHRD+K DN+ ++ G +K+ D G M +
Sbjct: 169 WARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLD-KSGHLKLADFGTCMKMNKEGMVR 225
Query: 169 AKSVIGTPEFMAPELY-----DENYNELADIYSFGMCMLEMVTFEYPY 211
+ +GTP++++PE+ D Y D +S G+ + EM+ + P+
Sbjct: 226 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR----FYNSWIDDQNKTVNIITELFTSG 96
V I VLQ R E+ +++ L H NI+R FY+S +N++ +
Sbjct: 48 VAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 104
Query: 97 SLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Y + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 105 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 162
Query: 154 KIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 205
K+ D G A + + S I + + APEL +Y D++S G + E++
Sbjct: 163 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR----FYNSWIDDQNKTVNIITELFTSG 96
V I VLQ R E+ +++ L H NI+R FY+S +N++ +
Sbjct: 49 VAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 105
Query: 97 SLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Y + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 106 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 163
Query: 154 KIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 205
K+ D G A + + S I + + APEL +Y D++S G + E++
Sbjct: 164 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 218
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR----FYNSWIDDQNKTVNIITELFTSG 96
V I VLQ R E+ +++ L H NI+R FY+S +N++ +
Sbjct: 48 VAIKKVLQGKAFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 104
Query: 97 SLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Y + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 105 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 162
Query: 154 KIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 205
K+ D G A + + S I + + APEL +Y D++S G + E++
Sbjct: 163 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR----FYNSWIDDQNKTVNIITELFTSG 96
V I VLQ R E+ +++ L H NI+R FY+S +N++ +
Sbjct: 52 VAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET 108
Query: 97 SLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Y + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 109 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 166
Query: 154 KIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 205
K+ D G A + + S I + + APEL +Y D++S G + E++
Sbjct: 167 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 221
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 116 WAR----QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ---AN 168
WAR +++ L +HS IHRD+K DN+ ++ G +K+ D G M +
Sbjct: 174 WARFYTAEVVLALDAIHSM--GFIHRDVKPDNMLLD-KSGHLKLADFGTCMKMNKEGMVR 230
Query: 169 AKSVIGTPEFMAPELY-----DENYNELADIYSFGMCMLEMVTFEYPY 211
+ +GTP++++PE+ D Y D +S G+ + EM+ + P+
Sbjct: 231 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 116 WAR----QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ---AN 168
WAR +++ L +HS IHRD+K DN+ ++ G +K+ D G M +
Sbjct: 174 WARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLD-KSGHLKLADFGTCMKMNKEGMVR 230
Query: 169 AKSVIGTPEFMAPELY-----DENYNELADIYSFGMCMLEMVTFEYPY 211
+ +GTP++++PE+ D Y D +S G+ + EM+ + P+
Sbjct: 231 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 11/195 (5%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWI-----DDQNKTVNIITELFTS 95
V I V+Q P R + L L H NI++ + + D ++ +N++ E
Sbjct: 51 VAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD 110
Query: 96 G---SLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGE 152
R Y + Q++ + LH + HRD+K N+ +N G
Sbjct: 111 TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGT 170
Query: 153 VKIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMVTFEY 209
+K+ D G A + + + I + + APEL +++Y DI+S G EM+ E
Sbjct: 171 LKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEP 230
Query: 210 PYSECRNSAQIYKKV 224
+ ++ Q+++ V
Sbjct: 231 IFRGDNSAGQLHEIV 245
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 41 VRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIR----FYNSWIDDQNKTVNIITELFTSG 96
V I VLQ R E+ +++ L H NI+R FY+S +N++ +
Sbjct: 48 VAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPET 104
Query: 97 SLR---QYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEV 153
R Y + Q+ L Y+HS I HRD+K N+ ++ + +
Sbjct: 105 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVL 162
Query: 154 KIGDLGLATIMEQANAK-SVIGTPEFMAPELY--DENYNELADIYSFGMCMLEMV 205
K+ D G A + + S I + + APEL +Y D++S G + E++
Sbjct: 163 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 32/156 (20%)
Query: 123 GLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLA---TIMEQANAKSVI-GTPEF 178
GL YLH+ IIHRD+K NI ++ N KI D G++ T + Q + V+ GT +
Sbjct: 151 GLHYLHTR--AIIHRDVKSINILLDENFVP-KITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 179 MAPELYDEN-YNELADIYSFGMCML---------------EMVTFEYPYSECRNSAQIYK 222
+ PE + + E +D+YSFG+ + EMV E N+ Q+ +
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 223 KV----SSGIKPAALSKVKDPEVKSFIEKCLVPASQ 254
V + I+P +L K D V KCL +S+
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAV-----KCLALSSE 298
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 18/183 (9%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW- 116
E ++ L H NI+R + Q+ I+ EL G L+ + R
Sbjct: 84 EALIISKLNHQNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 117 -----ARQILSGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANA 169
AR I G YL + IHRD+ N + G KIGD G+A + +A+
Sbjct: 142 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 199
Query: 170 KSVIGTP----EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 224
G ++M PE + E + D +SFG+ + E+ + Y +++ ++ + V
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 259
Query: 225 SSG 227
+SG
Sbjct: 260 TSG 262
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 70 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 129
NII+ ++ D +KT ++ E + +Q + ++L L Y HS
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQ---LYQILTDFDIRFYMYELLKALDYCHS 150
Query: 130 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPEFMAPELY--DE 186
I+HRD+K N+ I+ Q ++++ D GLA A +V + + F PEL +
Sbjct: 151 --KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQ 208
Query: 187 NYNELADIYSFGMCMLEMVTF 207
Y+ D++S G CML + F
Sbjct: 209 MYDYSLDMWSLG-CMLASMIF 228
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 14/233 (6%)
Query: 39 CQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL 98
C V+ + + ++ + +E ++K H N++ + + + ++ G L
Sbjct: 60 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 118
Query: 99 RQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 157
R + R G+ Q+ G+ YL S +HRDL N ++ + VK+ D
Sbjct: 119 RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLD-EKFTVKVAD 175
Query: 158 LGLATIMEQANAKSVIGTP------EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
GLA M SV ++MA E L + + +D++SFG+ + E++T P
Sbjct: 176 FGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
Query: 211 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELL 262
N+ I + G + DP + + KC P A R S EL+
Sbjct: 236 PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML-KCWHPKAEMRPSFSELV 287
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 70 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 129
NII+ ++ D +KT ++ E + +Q + ++L L Y HS
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQ---LYQILTDFDIRFYMYELLKALDYCHS 155
Query: 130 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPEFMAPELY--DE 186
I+HRD+K N+ I+ Q ++++ D GLA A +V + + F PEL +
Sbjct: 156 KG--IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQ 213
Query: 187 NYNELADIYSFGMCMLEMVTF 207
Y+ D++S G CML + F
Sbjct: 214 MYDYSLDMWSLG-CMLASMIF 233
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 20/184 (10%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW- 116
E ++ L H NI+R + Q+ I+ EL G L+ + R
Sbjct: 98 EALIISKLNHQNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 117 -----ARQILSGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANA 169
AR I G YL + IHRD+ N + G KIGD G+A + +A+
Sbjct: 156 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 213
Query: 170 KSVIGTP----EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEY-PYSECRNSAQIYKK 223
G ++M PE + E + D +SFG+ + E+ + Y PY +++ ++ +
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEF 272
Query: 224 VSSG 227
V+SG
Sbjct: 273 VTSG 276
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 14/233 (6%)
Query: 39 CQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL 98
C V+ + + ++ + +E ++K H N++ + + + ++ G L
Sbjct: 79 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 137
Query: 99 RQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 157
R + R G+ Q+ G+ YL S +HRDL N ++ + VK+ D
Sbjct: 138 RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLD-EKFTVKVAD 194
Query: 158 LGLATIMEQANAKSVIGTP------EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
GLA M SV ++MA E L + + +D++SFG+ + E++T P
Sbjct: 195 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
Query: 211 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELL 262
N+ I + G + DP + + KC P A R S EL+
Sbjct: 255 PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML-KCWHPKAEMRPSFSELV 306
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 53/209 (25%)
Query: 120 ILSGLIYLHSHDPPIIHRDLKCDNIFI-NGNQ-GEVKIGDLGLATIMEQANAKSVIGTPE 177
+ S L +LH+ I HRDLK +NI + NQ VKI D L + ++ S I TPE
Sbjct: 120 VASALDFLHNKG--IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177
Query: 178 ---------FMAPELYDEN------YNELADIYSFGMCMLEMVTFEYPY-----SEC--- 214
+MAPE+ + Y++ D++S G+ + +++ P+ S+C
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD 237
Query: 215 RNSA------QIYKKVSSGIKPAALSKVKDPE---------VKSFIEKCLV-PASQRLSA 258
R A +++ + G K + P+ K I K LV A QRLSA
Sbjct: 238 RGEACPACQNMLFESIQEG-------KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSA 290
Query: 259 KELLMDPFLQVNGTTKNRPLPLPDIVLPR 287
++L P++Q G LP P +VL R
Sbjct: 291 AQVLQHPWVQ--GCAPENTLPTP-MVLQR 316
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 14/233 (6%)
Query: 39 CQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL 98
C V+ + + ++ + +E ++K H N++ + + + ++ G L
Sbjct: 59 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 117
Query: 99 RQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 157
R + R G+ Q+ G+ YL S +HRDL N ++ + VK+ D
Sbjct: 118 RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLD-EKFTVKVAD 174
Query: 158 LGLATIMEQANAKSVIGTP------EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
GLA M SV ++MA E L + + +D++SFG+ + E++T P
Sbjct: 175 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
Query: 211 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELL 262
N+ I + G + DP + + KC P A R S EL+
Sbjct: 235 PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML-KCWHPKAEMRPSFSELV 286
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 98/247 (39%), Gaps = 30/247 (12%)
Query: 51 EDLERLYSEVHLLKSLKHNN--IIRFYNSWIDDQNKTVNIITELFTSGS--LRQYRXXXX 106
+ L+ +E+ L L+ ++ IIR Y+ I DQ I + G+ L +
Sbjct: 96 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKK 150
Query: 107 XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ 166
+ + +L + +H H I+H DLK N I G +K+ D G+A M+
Sbjct: 151 SIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV--DGMLKLIDFGIANQMQP 206
Query: 167 ANAKSV----IGTPEFMAPELYDE------------NYNELADIYSFGMCMLEMVTFEYP 210
V +GT +M PE + + +D++S G + M + P
Sbjct: 207 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
Query: 211 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLV-PASQRLSAKELLMDPFLQV 269
+ + N + + + +++ ++ CL QR+S ELL P++Q+
Sbjct: 267 FQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 326
Query: 270 NGTTKNR 276
N+
Sbjct: 327 QTHPVNQ 333
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 14/233 (6%)
Query: 39 CQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL 98
C V+ + + ++ + +E ++K H N++ + + + ++ G L
Sbjct: 61 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 119
Query: 99 RQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 157
R + R G+ Q+ G+ YL S +HRDL N ++ + VK+ D
Sbjct: 120 RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLD-EKFTVKVAD 176
Query: 158 LGLATIMEQANAKSVIGTP------EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
GLA M SV ++MA E L + + +D++SFG+ + E++T P
Sbjct: 177 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
Query: 211 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELL 262
N+ I + G + DP + + KC P A R S EL+
Sbjct: 237 PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML-KCWHPKAEMRPSFSELV 288
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 14/233 (6%)
Query: 39 CQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL 98
C V+ + + ++ + +E ++K H N++ + + + ++ G L
Sbjct: 58 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 116
Query: 99 RQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 157
R + R G+ Q+ G+ YL S +HRDL N ++ + VK+ D
Sbjct: 117 RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLD-EKFTVKVAD 173
Query: 158 LGLATIMEQANAKSVIGTP------EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
GLA M SV ++MA E L + + +D++SFG+ + E++T P
Sbjct: 174 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
Query: 211 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELL 262
N+ I + G + DP + + KC P A R S EL+
Sbjct: 234 PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML-KCWHPKAEMRPSFSELV 285
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 14/233 (6%)
Query: 39 CQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL 98
C V+ + + ++ + +E ++K H N++ + + + ++ G L
Sbjct: 56 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 114
Query: 99 RQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 157
R + R G+ Q+ G+ YL S +HRDL N ++ + VK+ D
Sbjct: 115 RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLD-EKFTVKVAD 171
Query: 158 LGLATIMEQANAKSVIGTP------EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
GLA M SV ++MA E L + + +D++SFG+ + E++T P
Sbjct: 172 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
Query: 211 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELL 262
N+ I + G + DP + + KC P A R S EL+
Sbjct: 232 PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML-KCWHPKAEMRPSFSELV 283
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 14/233 (6%)
Query: 39 CQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL 98
C V+ + + ++ + +E ++K H N++ + + + ++ G L
Sbjct: 53 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 111
Query: 99 RQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 157
R + R G+ Q+ G+ YL S +HRDL N ++ + VK+ D
Sbjct: 112 RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLD-EKFTVKVAD 168
Query: 158 LGLATIMEQANAKSVIGTP------EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
GLA M SV ++MA E L + + +D++SFG+ + E++T P
Sbjct: 169 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
Query: 211 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELL 262
N+ I + G + DP + + KC P A R S EL+
Sbjct: 229 PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML-KCWHPKAEMRPSFSELV 280
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 18/183 (9%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW- 116
E ++ H NI+R + Q+ I+ EL G L+ + R
Sbjct: 84 EALIISKFNHQNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 117 -----ARQILSGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANA 169
AR I G YL + IHRD+ N + G KIGD G+A + +A+
Sbjct: 142 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASY 199
Query: 170 KSVIGTP----EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 224
G ++M PE + E + D +SFG+ + E+ + Y +++ ++ + V
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 259
Query: 225 SSG 227
+SG
Sbjct: 260 TSG 262
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 18/183 (9%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW- 116
E ++ H NI+R + Q+ I+ EL G L+ + R
Sbjct: 84 EALIISKFNHQNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 117 -----ARQILSGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANA 169
AR I G YL + IHRD+ N + G KIGD G+A + +A+
Sbjct: 142 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 199
Query: 170 KSVIGTP----EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 224
G ++M PE + E + D +SFG+ + E+ + Y +++ ++ + V
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 259
Query: 225 SSG 227
+SG
Sbjct: 260 TSG 262
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 20/184 (10%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW- 116
E ++ H NI+R + Q+ I+ EL G L+ + R
Sbjct: 83 EALIISKFNHQNIVRCIG--VSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML 140
Query: 117 -----ARQILSGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANA 169
AR I G YL + IHRD+ N + G KIGD G+A + +A+
Sbjct: 141 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 198
Query: 170 KSVIGTP----EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEY-PYSECRNSAQIYKK 223
G ++M PE + E + D +SFG+ + E+ + Y PY +++ ++ +
Sbjct: 199 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEF 257
Query: 224 VSSG 227
V+SG
Sbjct: 258 VTSG 261
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 112/279 (40%), Gaps = 49/279 (17%)
Query: 51 EDLERLYSEVHLLKSLKHNN--IIRFYNSWIDDQNKTVNIITELFTSGS--LRQYRXXXX 106
+ L+ +E+ L L+ ++ IIR Y+ I DQ I + G+ L +
Sbjct: 48 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKK 102
Query: 107 XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ 166
+ + +L + +H H I+H DLK N I G +K+ D G+A M+
Sbjct: 103 SIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV--DGMLKLIDFGIANQMQP 158
Query: 167 ANAKSV----IGTPEFMAPELYDE------------NYNELADIYSFGMCMLEMVTFEYP 210
V +GT +M PE + + +D++S G + M + P
Sbjct: 159 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 218
Query: 211 YSECRNSAQIYKKVSSGIKP---AALSKVKDPEVKSFIEKCLV-PASQRLSAKELLMDPF 266
+ + N K+ + I P + + +++ ++ CL QR+S ELL P+
Sbjct: 219 FQQIINQI---SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 275
Query: 267 LQVN---------GTTKNRPLPLPDIV----LPRVGAFG 292
+Q+ GTT+ L +V +PR A G
Sbjct: 276 VQIQTHPVNQMAKGTTEEMKYVLGQLVGLNLVPRGSAAG 314
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 78/159 (49%), Gaps = 11/159 (6%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX--XXG 115
+E ++ L+H+N+++ ++++ + I+TE GSL Y
Sbjct: 63 AEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 121
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGT 175
++ + + YL ++ +HRDL N+ ++ + K+ D GL E ++ +
Sbjct: 122 FSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDN-VAKVSDFGLTK--EASSTQDTGKL 176
Query: 176 P-EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPY 211
P ++ APE L ++ ++ +D++SFG+ + E+ +F PY
Sbjct: 177 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 75/183 (40%), Gaps = 18/183 (9%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW- 116
E ++ H NI+R + Q+ I+ EL G L+ + R
Sbjct: 101 EALIISKFNHQNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 158
Query: 117 -----ARQILSGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANA 169
AR I G YL + IHRD+ N + G KIGD G+A + +A
Sbjct: 159 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGY 216
Query: 170 KSVIGTP----EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 224
G ++M PE + E + D +SFG+ + E+ + Y +++ ++ + V
Sbjct: 217 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 276
Query: 225 SSG 227
+SG
Sbjct: 277 TSG 279
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 20/184 (10%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW- 116
E ++ H NI+R + Q+ I+ EL G L+ + R
Sbjct: 75 EALIISKFNHQNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 132
Query: 117 -----ARQILSGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANA 169
AR I G YL + IHRD+ N + G KIGD G+A + +A+
Sbjct: 133 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 190
Query: 170 KSVIGTP----EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEY-PYSECRNSAQIYKK 223
G ++M PE + E + D +SFG+ + E+ + Y PY +++ ++ +
Sbjct: 191 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEF 249
Query: 224 VSSG 227
V+SG
Sbjct: 250 VTSG 253
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQANAKS 171
Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +A+
Sbjct: 152 QVAKGMEFLASRK--XIHRDLAARNILLS-EKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 172 VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++ G +
Sbjct: 209 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTR 265
Query: 230 PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 271
A PE+ + C SQR + EL+ + LQ N
Sbjct: 266 MRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 309
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 18/183 (9%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW- 116
E ++ H NI+R + Q+ I+ EL G L+ + R
Sbjct: 90 EALIISKFNHQNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 147
Query: 117 -----ARQILSGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANA 169
AR I G YL + IHRD+ N + G KIGD G+A + +A+
Sbjct: 148 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 205
Query: 170 KSVIGTP----EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 224
G ++M PE + E + D +SFG+ + E+ + Y +++ ++ + V
Sbjct: 206 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 265
Query: 225 SSG 227
+SG
Sbjct: 266 TSG 268
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 20/184 (10%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW- 116
E ++ H NI+R + Q+ I+ EL G L+ + R
Sbjct: 83 EALIISKFNHQNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 140
Query: 117 -----ARQILSGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANA 169
AR I G YL + IHRD+ N + G KIGD G+A + +A+
Sbjct: 141 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 198
Query: 170 KSVIGTP----EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEY-PYSECRNSAQIYKK 223
G ++M PE + E + D +SFG+ + E+ + Y PY +++ ++ +
Sbjct: 199 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEF 257
Query: 224 VSSG 227
V+SG
Sbjct: 258 VTSG 261
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 14/233 (6%)
Query: 39 CQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL 98
C V+ + + ++ + +E ++K H N++ + + + ++ G L
Sbjct: 60 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 118
Query: 99 RQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 157
R + R G+ Q+ G+ YL S +HRDL N ++ + VK+ D
Sbjct: 119 RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLD-EKFTVKVAD 175
Query: 158 LGLATIMEQANAKSVIGTP------EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
GLA M SV ++MA E L + + +D++SFG+ + E++T P
Sbjct: 176 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
Query: 211 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELL 262
N+ I + G + DP + + KC P A R S EL+
Sbjct: 236 PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML-KCWHPKAEMRPSFSELV 287
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 14/233 (6%)
Query: 39 CQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL 98
C V+ + + ++ + +E ++K H N++ + + + ++ G L
Sbjct: 80 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 138
Query: 99 RQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 157
R + R G+ Q+ G+ YL S +HRDL N ++ + VK+ D
Sbjct: 139 RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLD-EKFTVKVAD 195
Query: 158 LGLATIMEQANAKSVIGTP------EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
GLA M SV ++MA E L + + +D++SFG+ + E++T P
Sbjct: 196 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
Query: 211 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELL 262
N+ I + G + DP + + KC P A R S EL+
Sbjct: 256 PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML-KCWHPKAEMRPSFSELV 307
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 18/183 (9%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW- 116
E ++ H NI+R + Q+ I+ EL G L+ + R
Sbjct: 110 EALIISKFNHQNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 167
Query: 117 -----ARQILSGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANA 169
AR I G YL + IHRD+ N + G KIGD G+A + +A+
Sbjct: 168 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 225
Query: 170 KSVIGTP----EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 224
G ++M PE + E + D +SFG+ + E+ + Y +++ ++ + V
Sbjct: 226 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 285
Query: 225 SSG 227
+SG
Sbjct: 286 TSG 288
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 18/183 (9%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW- 116
E ++ H NI+R + Q+ I+ EL G L+ + R
Sbjct: 100 EALIISKFNHQNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 157
Query: 117 -----ARQILSGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANA 169
AR I G YL + IHRD+ N + G KIGD G+A + +A+
Sbjct: 158 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 215
Query: 170 KSVIGTP----EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 224
G ++M PE + E + D +SFG+ + E+ + Y +++ ++ + V
Sbjct: 216 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 275
Query: 225 SSG 227
+SG
Sbjct: 276 TSG 278
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 14/233 (6%)
Query: 39 CQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL 98
C V+ + + ++ + +E ++K H N++ + + + ++ G L
Sbjct: 61 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 119
Query: 99 RQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 157
R + R G+ Q+ G+ YL S +HRDL N ++ + VK+ D
Sbjct: 120 RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLD-EKFTVKVAD 176
Query: 158 LGLATIMEQANAKSVIGTP------EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
GLA M SV ++MA E L + + +D++SFG+ + E++T P
Sbjct: 177 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
Query: 211 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELL 262
N+ I + G + DP + + KC P A R S EL+
Sbjct: 237 PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML-KCWHPKAEMRPSFSELV 288
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 96/240 (40%), Gaps = 30/240 (12%)
Query: 51 EDLERLYSEVHLLKSLKHNN--IIRFYNSWIDDQNKTVNIITELFTSGS--LRQYRXXXX 106
+ L+ +E+ L L+ ++ IIR Y+ I DQ I + G+ L +
Sbjct: 96 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKK 150
Query: 107 XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ 166
+ + +L + +H H I+H DLK N I G +K+ D G+A M+
Sbjct: 151 SIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV--DGMLKLIDFGIANQMQP 206
Query: 167 ANAKSV----IGTPEFMAPELYDE------------NYNELADIYSFGMCMLEMVTFEYP 210
V +GT +M PE + + +D++S G + M + P
Sbjct: 207 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
Query: 211 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLV-PASQRLSAKELLMDPFLQV 269
+ + N + + + +++ ++ CL QR+S ELL P++Q+
Sbjct: 267 FQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 326
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 18/183 (9%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW- 116
E ++ H NI+R + Q+ I+ EL G L+ + R
Sbjct: 98 EALIISKFNHQNIVRCIG--VSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 117 -----ARQILSGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANA 169
AR I G YL + IHRD+ N + G KIGD G+A + +A+
Sbjct: 156 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 213
Query: 170 KSVIGTP----EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 224
G ++M PE + E + D +SFG+ + E+ + Y +++ ++ + V
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 273
Query: 225 SSG 227
+SG
Sbjct: 274 TSG 276
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 12/158 (7%)
Query: 61 HLLKSLKHNNIIRFYN--SWIDDQNKTVNIITELFTSG-SLRQYRXXXXXXXXXXXXGWA 117
L + H +I++ +N D V I + G SL+ R +
Sbjct: 131 QFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK--RSKGQKLPVAEAIAYL 188
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPE 177
+IL L YLHS +++ DLK +NI + Q +K+ DLG + + + GTP
Sbjct: 189 LEILPALSYLHSIG--LVYNDLKPENIMLTEEQ--LKLIDLGAVSRINSFG--YLYGTPG 242
Query: 178 FMAPELYDENYNELADIYSFGMCMLEMVTFEYPYSECR 215
F APE+ DIY+ G L +T + P R
Sbjct: 243 FQAPEIVRTGPTVATDIYTVGRT-LAALTLDLPTRNGR 279
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 78/159 (49%), Gaps = 11/159 (6%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX--XXG 115
+E ++ L+H+N+++ ++++ + I+TE GSL Y
Sbjct: 48 AEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 106
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGT 175
++ + + YL ++ +HRDL N+ ++ + K+ D GL E ++ +
Sbjct: 107 FSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDN-VAKVSDFGLTK--EASSTQDTGKL 161
Query: 176 P-EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPY 211
P ++ APE L ++ ++ +D++SFG+ + E+ +F PY
Sbjct: 162 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 75/183 (40%), Gaps = 18/183 (9%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW- 116
E ++ H NI+R + Q+ I+ EL G L+ + R
Sbjct: 124 EALIISKFNHQNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 181
Query: 117 -----ARQILSGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANA 169
AR I G YL + IHRD+ N + G KIGD G+A + +A
Sbjct: 182 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGY 239
Query: 170 KSVIGTP----EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 224
G ++M PE + E + D +SFG+ + E+ + Y +++ ++ + V
Sbjct: 240 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 299
Query: 225 SSG 227
+SG
Sbjct: 300 TSG 302
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 22/174 (12%)
Query: 130 HDPPIIHRDLKCDNIFINGNQGEVKIGDLG-LATIMEQANAKSV--IGTPEFMAPELYDE 186
H +HRD+K DNI ++ G +++ D G + +S+ +GTP++++PE+
Sbjct: 179 HRLGYVHRDIKPDNILLD-RCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQA 237
Query: 187 NYNEL--------ADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKVKD 238
D ++ G+ EM + P+ ++A+ Y K+ + +L V +
Sbjct: 238 VGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFY-ADSTAETYGKIVHYKEHLSLPLVDE 296
Query: 239 ---PEVKSFIEKCLVPASQRL---SAKELLMDPF---LQVNGTTKNRPLPLPDI 283
E + FI++ L P RL A + PF L +G + P PD
Sbjct: 297 GVPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFFFGLDWDGLRDSVPPFTPDF 350
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 92/225 (40%), Gaps = 21/225 (9%)
Query: 42 RIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVN---IITELFTSGSL 98
R ++L +R+ E+ LL H NI+ + ++ + ++ ++TEL +
Sbjct: 62 RTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLA 121
Query: 99 RQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
+ + IL GL LH + ++HRDL NI + N ++ I D
Sbjct: 122 QVIHDQRIVISPQHIQYFMYHILLGLHVLH--EAGVVHRDLHPGNILLADN-NDITICDF 178
Query: 159 GLATI-MEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMCMLEMVTFEYPYSECR 215
LA AN + + APEL + + +L D++S G M EM +
Sbjct: 179 NLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEM----FNRKALF 234
Query: 216 NSAQIYKKVSSGIKPAALSKVKD------PEVKSFIEKCL--VPA 252
+ Y +++ ++ K++D P + ++ L VPA
Sbjct: 235 RGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPA 279
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQANAKS 171
Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +A+
Sbjct: 156 QVAKGMEFLASRK--XIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 172 VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++ G +
Sbjct: 213 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 269
Query: 230 PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 271
A PE+ + C SQR + EL+ + LQ N
Sbjct: 270 MRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 19/168 (11%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQAN 168
++ Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +
Sbjct: 203 YSFQVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGD 259
Query: 169 AKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSS 226
A+ + ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++
Sbjct: 260 ARLPL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 316
Query: 227 GIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 271
G + A PE+ + C SQR + EL+ + LQ N
Sbjct: 317 GTRMRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 363
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 19/168 (11%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQAN 168
++ Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +
Sbjct: 205 YSFQVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGD 261
Query: 169 AKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSS 226
A+ + ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++
Sbjct: 262 ARLPL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 318
Query: 227 GIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 271
G + A PE+ + C SQR + EL+ + LQ N
Sbjct: 319 GTRMRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 365
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 92/225 (40%), Gaps = 21/225 (9%)
Query: 42 RIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVN---IITELFTSGSL 98
R ++L +R+ E+ LL H NI+ + ++ + ++ ++TEL +
Sbjct: 62 RTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLA 121
Query: 99 RQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL 158
+ + IL GL LH + ++HRDL NI + N ++ I D
Sbjct: 122 QVIHDQRIVISPQHIQYFMYHILLGLHVLH--EAGVVHRDLHPGNILLADN-NDITICDF 178
Query: 159 GLATI-MEQANAKSVIGTPEFMAPELYDE--NYNELADIYSFGMCMLEMVTFEYPYSECR 215
LA AN + + APEL + + +L D++S G M EM +
Sbjct: 179 NLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEM----FNRKALF 234
Query: 216 NSAQIYKKVSSGIKPAALSKVKD------PEVKSFIEKCL--VPA 252
+ Y +++ ++ K++D P + ++ L VPA
Sbjct: 235 RGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPA 279
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 78/159 (49%), Gaps = 11/159 (6%)
Query: 58 SEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX--XXG 115
+E ++ L+H+N+++ ++++ + I+TE GSL Y
Sbjct: 235 AEASVMTQLRHSNLVQLLGVIVEEKGG-LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 293
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGT 175
++ + + YL ++ +HRDL N+ ++ + K+ D GL E ++ +
Sbjct: 294 FSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDN-VAKVSDFGLTK--EASSTQDTGKL 348
Query: 176 P-EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPY 211
P ++ APE L ++ ++ +D++SFG+ + E+ +F PY
Sbjct: 349 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 18/183 (9%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXXXXXXXXXGW- 116
E ++ H NI+R + Q+ I+ EL G L+ + R
Sbjct: 98 EALIISKFNHQNIVRCIG--VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 117 -----ARQILSGLIYLHSHDPPIIHRDLKCDNIFIN--GNQGEVKIGDLGLATIMEQANA 169
AR I G YL + IHRD+ N + G KIGD G+A + +A+
Sbjct: 156 DLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 213
Query: 170 KSVIGTP----EFMAPELYDEN-YNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 224
G ++M PE + E + D +SFG+ + E+ + Y +++ ++ + V
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 273
Query: 225 SSG 227
+SG
Sbjct: 274 TSG 276
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 14/233 (6%)
Query: 39 CQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL 98
C V+ + + ++ + +E ++K H N++ + + + ++ G L
Sbjct: 120 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 178
Query: 99 RQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 157
R + R G+ Q+ G+ +L S +HRDL N ++ + VK+ D
Sbjct: 179 RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLD-EKFTVKVAD 235
Query: 158 LGLATIM-----EQANAKSVIGTP-EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
GLA M + + K+ P ++MA E L + + +D++SFG+ + E++T P
Sbjct: 236 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
Query: 211 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELL 262
N+ I + G + DP + + KC P A R S EL+
Sbjct: 296 PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML-KCWHPKAEMRPSFSELV 347
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQANAKS 171
Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +A+
Sbjct: 147 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 172 VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++ G +
Sbjct: 204 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 260
Query: 230 PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 271
A PE+ + C SQR + EL+ + LQ N
Sbjct: 261 MRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 19/168 (11%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQAN 168
++ Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +
Sbjct: 198 YSFQVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGD 254
Query: 169 AKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSS 226
A+ + ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++
Sbjct: 255 ARLPL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 311
Query: 227 GIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 271
G + A PE+ + C SQR + EL+ + LQ N
Sbjct: 312 GTRMRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 358
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 34/203 (16%)
Query: 52 DLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX 111
D E + E ++ L + I+R Q + + ++ E+ G L ++
Sbjct: 53 DTEEMMREAQIMHQLDNPYIVRLIGV---CQAEALMLVMEMAGGGPLHKFLVGKREEIPV 109
Query: 112 XXXG-WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQ 166
Q+ G+ YL + +HRDL N+ + N+ KI D GL+ +
Sbjct: 110 SNVAELLHQVSMGMKYLEEKN--FVHRDLAARNVLLV-NRHYAKISDFGLSKALGADDSY 166
Query: 167 ANAKSVIGTP-EFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 224
A+S P ++ APE + ++ +D++S+G+ M E +++
Sbjct: 167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSY----------------- 209
Query: 225 SSGIKPAALSKVKDPEVKSFIEK 247
G KP K+K PEV +FIE+
Sbjct: 210 --GQKP--YKKMKGPEVMAFIEQ 228
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 14/233 (6%)
Query: 39 CQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL 98
C V+ + + ++ + +E ++K H N++ + + + ++ G L
Sbjct: 61 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 119
Query: 99 RQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 157
R + R G+ Q+ G+ +L S +HRDL N ++ + VK+ D
Sbjct: 120 RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLD-EKFTVKVAD 176
Query: 158 LGLATIM-----EQANAKSVIGTP-EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
GLA M + + K+ P ++MA E L + + +D++SFG+ + E++T P
Sbjct: 177 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
Query: 211 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELL 262
N+ I + G + DP + + KC P A R S EL+
Sbjct: 237 PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML-KCWHPKAEMRPSFSELV 288
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQANAKS 171
Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +A+
Sbjct: 147 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 172 VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++ G +
Sbjct: 204 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 260
Query: 230 PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 271
A PE+ + C SQR + EL+ + LQ N
Sbjct: 261 MRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQANAKS 171
Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +A+
Sbjct: 199 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 172 VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++ G +
Sbjct: 256 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 312
Query: 230 PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 271
A PE+ + C SQR + EL+ + LQ N
Sbjct: 313 MRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 356
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQANAKS 171
Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +A+
Sbjct: 156 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 172 VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++ G +
Sbjct: 213 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 269
Query: 230 PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 271
A PE+ + C SQR + EL+ + LQ N
Sbjct: 270 MRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQANAKS 171
Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +A+
Sbjct: 147 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 172 VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++ G +
Sbjct: 204 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 260
Query: 230 PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 271
A PE+ + C SQR + EL+ + LQ N
Sbjct: 261 MRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 102/250 (40%), Gaps = 36/250 (14%)
Query: 51 EDLERLYSEVHLLKSLKHNN--IIRFYNSWIDDQNKTVNIITELFTSGS--LRQYRXXXX 106
+ L+ +E+ L L+ ++ IIR Y+ I DQ I + G+ L +
Sbjct: 52 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKK 106
Query: 107 XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ 166
+ + +L + +H H I+H DLK N I G +K+ D G+A M+
Sbjct: 107 SIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV--DGMLKLIDFGIANQMQP 162
Query: 167 ANAKSV----IGTPEFMAPELYDE------------NYNELADIYSFGMCMLEMVTFEYP 210
V +GT +M PE + + +D++S G + M + P
Sbjct: 163 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 222
Query: 211 YSECRNSAQIYKKVSSGIKP---AALSKVKDPEVKSFIEKCLV-PASQRLSAKELLMDPF 266
+ + N K+ + I P + + +++ ++ CL QR+S ELL P+
Sbjct: 223 FQQIINQI---SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 279
Query: 267 LQVNGTTKNR 276
+Q+ N+
Sbjct: 280 VQIQTHPVNQ 289
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 14/233 (6%)
Query: 39 CQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL 98
C V+ + + ++ + +E ++K H N++ + + + ++ G L
Sbjct: 66 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 124
Query: 99 RQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 157
R + R G+ Q+ G+ +L S +HRDL N ++ + VK+ D
Sbjct: 125 RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLD-EKFTVKVAD 181
Query: 158 LGLATIM-----EQANAKSVIGTP-EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
GLA M + + K+ P ++MA E L + + +D++SFG+ + E++T P
Sbjct: 182 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
Query: 211 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELL 262
N+ I + G + DP + + KC P A R S EL+
Sbjct: 242 PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML-KCWHPKAEMRPSFSELV 293
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 14/233 (6%)
Query: 39 CQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL 98
C V+ + + ++ + +E ++K H N++ + + + ++ G L
Sbjct: 62 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 120
Query: 99 RQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 157
R + R G+ Q+ G+ +L S +HRDL N ++ + VK+ D
Sbjct: 121 RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLD-EKFTVKVAD 177
Query: 158 LGLATIM-----EQANAKSVIGTP-EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
GLA M + + K+ P ++MA E L + + +D++SFG+ + E++T P
Sbjct: 178 FGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
Query: 211 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELL 262
N+ I + G + DP + + KC P A R S EL+
Sbjct: 238 PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML-KCWHPKAEMRPSFSELV 289
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 14/233 (6%)
Query: 39 CQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL 98
C V+ + + ++ + +E ++K H N++ + + + ++ G L
Sbjct: 62 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 120
Query: 99 RQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 157
R + R G+ Q+ G+ +L S +HRDL N ++ + VK+ D
Sbjct: 121 RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLD-EKFTVKVAD 177
Query: 158 LGLATIM-----EQANAKSVIGTP-EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
GLA M + + K+ P ++MA E L + + +D++SFG+ + E++T P
Sbjct: 178 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
Query: 211 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELL 262
N+ I + G + DP + + KC P A R S EL+
Sbjct: 238 PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML-KCWHPKAEMRPSFSELV 289
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQANAKS 171
Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +A+
Sbjct: 156 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 172 VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++ G +
Sbjct: 213 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 269
Query: 230 PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 271
A PE+ + C SQR + EL+ + LQ N
Sbjct: 270 MRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 78/163 (47%), Gaps = 11/163 (6%)
Query: 54 ERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXX- 112
+ +E ++ L+H+N+++ ++++ + I+TE GSL Y
Sbjct: 50 QAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGD 108
Query: 113 -XXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKS 171
++ + + YL ++ +HRDL N+ ++ + K+ D GL E ++ +
Sbjct: 109 CLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDN-VAKVSDFGLTK--EASSTQD 163
Query: 172 VIGTP-EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPY 211
P ++ APE L + ++ +D++SFG+ + E+ +F PY
Sbjct: 164 TGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 102/250 (40%), Gaps = 36/250 (14%)
Query: 51 EDLERLYSEVHLLKSLKHNN--IIRFYNSWIDDQNKTVNIITELFTSGS--LRQYRXXXX 106
+ L+ +E+ L L+ ++ IIR Y+ I DQ I + G+ L +
Sbjct: 68 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKK 122
Query: 107 XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ 166
+ + +L + +H H I+H DLK N I G +K+ D G+A M+
Sbjct: 123 SIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV--DGMLKLIDFGIANQMQP 178
Query: 167 ANAKSV----IGTPEFMAPELYDE------------NYNELADIYSFGMCMLEMVTFEYP 210
V +GT +M PE + + +D++S G + M + P
Sbjct: 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
Query: 211 YSECRNSAQIYKKVSSGIKP---AALSKVKDPEVKSFIEKCLV-PASQRLSAKELLMDPF 266
+ + N K+ + I P + + +++ ++ CL QR+S ELL P+
Sbjct: 239 FQQIINQI---SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 295
Query: 267 LQVNGTTKNR 276
+Q+ N+
Sbjct: 296 VQIQTHPVNQ 305
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQANAKS 171
Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +A+
Sbjct: 156 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 212
Query: 172 VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++ G +
Sbjct: 213 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 269
Query: 230 PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 271
A PE+ + C SQR + EL+ + LQ N
Sbjct: 270 MRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQANAKS 171
Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +A+
Sbjct: 147 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 172 VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++ G +
Sbjct: 204 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 260
Query: 230 PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 271
A PE+ + C SQR + EL+ + LQ N
Sbjct: 261 MRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 41/204 (20%)
Query: 41 VRIDDVLQSPEDL---ERLYSEVHLLKSLKHNNIIRFYNSWID---DQNKTVNIITELFT 94
V I +L+ EDL +R+ E+ +L L H+++++ + I ++ + ++ E+
Sbjct: 81 VAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD 140
Query: 95 SGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVK 154
S + +R +L G+ Y+HS I+HRDLK N +N + VK
Sbjct: 141 SDFKKLFRTPVYLTELHIKT-LLYNLLVGVKYVHSAG--ILHRDLKPANCLVNQD-CSVK 196
Query: 155 IGDLGLATIM---EQANAKSVIGTPE--------------------------FMAPEL-- 183
+ D GLA + E N++ I E + APEL
Sbjct: 197 VCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELIL 256
Query: 184 YDENYNELADIYSFGMCMLEMVTF 207
ENY E D++S G E++
Sbjct: 257 LQENYTEAIDVWSIGCIFAELLNM 280
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 14/233 (6%)
Query: 39 CQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL 98
C V+ + + ++ + +E ++K H N++ + + + ++ G L
Sbjct: 61 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 119
Query: 99 RQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 157
R + R G+ Q+ G+ +L S +HRDL N ++ + VK+ D
Sbjct: 120 RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLD-EKFTVKVAD 176
Query: 158 LGLATIM-----EQANAKSVIGTP-EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
GLA M + + K+ P ++MA E L + + +D++SFG+ + E++T P
Sbjct: 177 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
Query: 211 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELL 262
N+ I + G + DP + + KC P A R S EL+
Sbjct: 237 PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML-KCWHPKAEMRPSFSELV 288
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQANAKS 171
Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +A+
Sbjct: 156 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDXVRKGDARL 212
Query: 172 VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++ G +
Sbjct: 213 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 269
Query: 230 PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 271
A PE+ + C SQR + EL+ + LQ N
Sbjct: 270 MRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQANAKS 171
Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +A+
Sbjct: 158 QVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 214
Query: 172 VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++ G +
Sbjct: 215 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 271
Query: 230 PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 271
A PE+ + C SQR + EL+ + LQ N
Sbjct: 272 MRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 315
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 14/233 (6%)
Query: 39 CQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSL 98
C V+ + + ++ + +E ++K H N++ + + + ++ G L
Sbjct: 59 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDL 117
Query: 99 RQY-RXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGD 157
R + R G+ Q+ G+ +L S +HRDL N ++ + VK+ D
Sbjct: 118 RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLD-EKFTVKVAD 174
Query: 158 LGLATIM-----EQANAKSVIGTP-EFMAPE-LYDENYNELADIYSFGMCMLEMVTFEYP 210
GLA M + + K+ P ++MA E L + + +D++SFG+ + E++T P
Sbjct: 175 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
Query: 211 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLVP-ASQRLSAKELL 262
N+ I + G + DP + + KC P A R S EL+
Sbjct: 235 PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML-KCWHPKAEMRPSFSELV 286
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 34/203 (16%)
Query: 52 DLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXX 111
D E + E ++ L + I+R Q + + ++ E+ G L ++
Sbjct: 379 DTEEMMREAQIMHQLDNPYIVRLIGVC---QAEALMLVMEMAGGGPLHKFLVGKREEIPV 435
Query: 112 XXXG-WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIM----EQ 166
Q+ G+ YL + +HR+L N+ + N+ KI D GL+ +
Sbjct: 436 SNVAELLHQVSMGMKYLEEKN--FVHRNLAARNVLLV-NRHYAKISDFGLSKALGADDSY 492
Query: 167 ANAKSVIGTP-EFMAPELYD-ENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKV 224
A+S P ++ APE + ++ +D++S+G+ M E +++
Sbjct: 493 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSY----------------- 535
Query: 225 SSGIKPAALSKVKDPEVKSFIEK 247
G KP K+K PEV +FIE+
Sbjct: 536 --GQKP--YKKMKGPEVMAFIEQ 554
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQANAKS 171
Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +A+
Sbjct: 152 QVAKGMEFLASRK--XIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 172 VIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
+ ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++ G +
Sbjct: 209 PL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 265
Query: 230 PAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 271
A PE+ + C SQR + EL+ + LQ N
Sbjct: 266 MRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 309
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 19/168 (11%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLAT-------IMEQAN 168
++ Q+ G+ +L S IHRDL NI ++ + VKI D GLA + + +
Sbjct: 190 YSFQVAKGMEFLASRK--CIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 169 AKSVIGTPEFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSS 226
A+ + ++MAPE ++D Y +D++SFG+ + E+ + PY + + +++
Sbjct: 247 ARLPL---KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 303
Query: 227 GIKPAALSKVKDPEVKSFIEKCL-VPASQRLSAKELL--MDPFLQVNG 271
G + A PE+ + C SQR + EL+ + LQ N
Sbjct: 304 GTRMRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 350
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 100/243 (41%), Gaps = 36/243 (14%)
Query: 51 EDLERLYSEVHLLKSLKHNN--IIRFYNSWIDDQNKTVNIITELFTSGS--LRQYRXXXX 106
+ L+ +E+ L L+ ++ IIR Y+ I DQ I + G+ L +
Sbjct: 49 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKK 103
Query: 107 XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ 166
+ + +L + +H H I+H DLK N I G +K+ D G+A M+
Sbjct: 104 SIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV--DGMLKLIDFGIANQMQP 159
Query: 167 ANAKSV----IGTPEFMAPELYDE------------NYNELADIYSFGMCMLEMVTFEYP 210
V +GT +M PE + + +D++S G + M + P
Sbjct: 160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219
Query: 211 YSECRNSAQIYKKVSSGIKP---AALSKVKDPEVKSFIEKCLV-PASQRLSAKELLMDPF 266
+ + N K+ + I P + + +++ ++ CL QR+S ELL P+
Sbjct: 220 FQQIINQIS---KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 276
Query: 267 LQV 269
+Q+
Sbjct: 277 VQI 279
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Query: 59 EVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWAR 118
E+ +LK LKH N++ + + + ++++ E L +
Sbjct: 52 EIRMLKQLKHPNLVNLLEVF--RRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITW 109
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN--AKSVIGTP 176
Q L + + H H+ IHRD+K +NI I +K+ D G A ++ + + T
Sbjct: 110 QTLQAVNFCHKHN--CIHRDVKPENILIT-KHSVIKLCDFGFARLLTGPSDYYDDEVATR 166
Query: 177 EFMAPELY--DENYNELADIYSFGMCMLEMVT 206
+ +PEL D Y D+++ G E+++
Sbjct: 167 WYRSPELLVGDTQYGPPVDVWAIGCVFAELLS 198
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 102/250 (40%), Gaps = 36/250 (14%)
Query: 51 EDLERLYSEVHLLKSLKHNN--IIRFYNSWIDDQNKTVNIITELFTSGS--LRQYRXXXX 106
+ L+ +E+ L L+ ++ IIR Y+ I DQ I + G+ L +
Sbjct: 68 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKK 122
Query: 107 XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ 166
+ + +L + +H H I+H DLK N I G +K+ D G+A M+
Sbjct: 123 SIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV--DGMLKLIDFGIANQMQP 178
Query: 167 ANAKSV----IGTPEFMAPELYDE------------NYNELADIYSFGMCMLEMVTFEYP 210
V +GT +M PE + + +D++S G + M + P
Sbjct: 179 DXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
Query: 211 YSECRNSAQIYKKVSSGIKP---AALSKVKDPEVKSFIEKCLV-PASQRLSAKELLMDPF 266
+ + N K+ + I P + + +++ ++ CL QR+S ELL P+
Sbjct: 239 FQQIINQI---SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 295
Query: 267 LQVNGTTKNR 276
+Q+ N+
Sbjct: 296 VQIQTHPVNQ 305
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 95/240 (39%), Gaps = 30/240 (12%)
Query: 51 EDLERLYSEVHLLKSLKHNN--IIRFYNSWIDDQNKTVNIITELFTSGS--LRQYRXXXX 106
+ L+ +E+ L L+ ++ IIR Y+ I DQ I + G+ L +
Sbjct: 96 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKK 150
Query: 107 XXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQ 166
+ + +L + +H H I+H DLK N I G +K+ D G+A M+
Sbjct: 151 SIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV--DGMLKLIDFGIANQMQP 206
Query: 167 ANAKSV----IGTPEFMAPELYDE------------NYNELADIYSFGMCMLEMVTFEYP 210
V +G +M PE + + +D++S G + M + P
Sbjct: 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
Query: 211 YSECRNSAQIYKKVSSGIKPAALSKVKDPEVKSFIEKCLV-PASQRLSAKELLMDPFLQV 269
+ + N + + + +++ ++ CL QR+S ELL P++Q+
Sbjct: 267 FQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 326
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGT 175
++ Q+ G+ +L S IHRDL NI ++ N VKI D GLA + + G
Sbjct: 204 YSFQVARGMEFLSSRK--CIHRDLAARNILLSENN-VVKICDFGLARDIYKNPDYVRKGD 260
Query: 176 P----EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIK 229
++MAPE ++D+ Y+ +D++S+G+ + E+ + PY + ++ G++
Sbjct: 261 TRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMR 320
Query: 230 PAALSKVKDPEVKSFIEKC 248
A + PE+ + C
Sbjct: 321 MRA-PEYSTPEIYQIMLDC 338
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN------AKS 171
+ +L+GL Y+H + I+HRD+K N+ I + G +K+ D GLA A +
Sbjct: 132 QMLLNGLYYIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 172 VIGTPEFMAPELY--DENYNELADIYSFGMCMLEMVT 206
+ T + PEL + +Y D++ G M EM T
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 76/193 (39%), Gaps = 11/193 (5%)
Query: 63 LKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQ--YRXXXXXXXXXXXXGWARQI 120
L+ H N++ + +IT GSL + +A +
Sbjct: 61 LRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDM 120
Query: 121 LSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPEFMA 180
G+ +LH+ +P I L ++ I+ E + +A + + + P ++A
Sbjct: 121 ARGMAFLHTLEPLIPRHALNSRSVMID----EDMTARISMADVKFSFQSPGRMYAPAWVA 176
Query: 181 PELYDENYNEL----ADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVSSGIKPAALSKV 236
PE + + AD++SF + + E+VT E P+++ N K G++P +
Sbjct: 177 PEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGI 236
Query: 237 KDPEVKSFIEKCL 249
P V ++ C+
Sbjct: 237 -SPHVSKLMKICM 248
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLK-HNNIIRFYNSWIDDQN 83
+K+ D G VA +I D Q+ D +R + E+ +L L H NI+ N D +
Sbjct: 26 WKSIDRRTGEVVA--VKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADND 83
Query: 84 KTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDN 143
+ V ++ + + R + Q++ + YLHS ++HRD+K N
Sbjct: 84 RDVYLVFDYMETDLHAVIRANILEPVHKQYVVY--QLIKVIKYLHSGG--LLHRDMKPSN 139
Query: 144 IFINGNQGEVKIGDLGLA 161
I +N + VK+ D GL+
Sbjct: 140 ILLNA-ECHVKVADFGLS 156
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 177
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 139 EILKALDYCHSMG--IMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 178 FMAPELY--DENYNELADIYSFGMCMLEMVTF 207
F PEL + Y+ D++S G CML + F
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 227
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 177
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 139 EILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 178 FMAPELY--DENYNELADIYSFGMCMLEMVTF 207
F PEL + Y+ D++S G CML + F
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 227
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 177
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 139 EILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 178 FMAPELY--DENYNELADIYSFGMCMLEMVTF 207
F PEL + Y+ D++S G CML + F
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 227
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 177
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 139 EILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 178 FMAPELY--DENYNELADIYSFGMCMLEMVTF 207
F PEL + Y+ D++S G CML + F
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 227
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 177
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 139 EILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 178 FMAPELY--DENYNELADIYSFGMCMLEMVTF 207
F PEL + Y+ D++S G CML + F
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 227
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 177
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 139 EILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 178 FMAPELY--DENYNELADIYSFGMCMLEMVTF 207
F PEL + Y+ D++S G CML + F
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 227
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN------AKS 171
+ +L+GL Y+H + I+HRD+K N+ I + G +K+ D GLA A +
Sbjct: 131 QMLLNGLYYIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXN 187
Query: 172 VIGTPEFMAPELY--DENYNELADIYSFGMCMLEMVT 206
+ T + PEL + +Y D++ G M EM T
Sbjct: 188 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 177
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 144 EILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 201
Query: 178 FMAPELY--DENYNELADIYSFGMCMLEMVTF 207
F PEL + Y+ D++S G CML + F
Sbjct: 202 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 232
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 177
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 139 EILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 178 FMAPELY--DENYNELADIYSFGMCMLEMVTF 207
F PEL + Y+ D++S G CML + F
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 227
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 177
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 139 EILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 178 FMAPELY--DENYNELADIYSFGMCMLEMVTF 207
F PEL + Y+ D++S G CML + F
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 227
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 177
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 139 EILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 178 FMAPELY--DENYNELADIYSFGMCMLEMVTF 207
F PEL + Y+ D++S G CML + F
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 227
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN------AKS 171
+ +L+GL Y+H + I+HRD+K N+ I + G +K+ D GLA A +
Sbjct: 132 QMLLNGLYYIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 172 VIGTPEFMAPELY--DENYNELADIYSFGMCMLEMVT 206
+ T + PEL + +Y D++ G M EM T
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 177
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 138 EILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 195
Query: 178 FMAPELY--DENYNELADIYSFGMCMLEMVTF 207
F PEL + Y+ D++S G CML + F
Sbjct: 196 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 226
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 177
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 138 EILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 195
Query: 178 FMAPELY--DENYNELADIYSFGMCMLEMVTF 207
F PEL + Y+ D++S G CML + F
Sbjct: 196 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 226
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 177
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 137 EILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 194
Query: 178 FMAPELY--DENYNELADIYSFGMCMLEMVTF 207
F PEL + Y+ D++S G CML + F
Sbjct: 195 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 225
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 177
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 139 EILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 178 FMAPELY--DENYNELADIYSFGMCMLEMVTF 207
F PEL + Y+ D++S G CML + F
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 227
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 17/177 (9%)
Query: 50 PEDLE-RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
P DL+ + E +LK H NI+R + Q + + I+ EL G + R
Sbjct: 152 PPDLKAKFLQEARILKQYSHPNIVRLIG--VCTQKQPIYIVMELVQGGDFLTFLRTEGAR 209
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
+G+ YL S IHRDL N + + +KI D G++ E+A
Sbjct: 210 LRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLVT-EKNVLKISDFGMSR--EEA 264
Query: 168 NAKSVIG-----TP-EFMAPELYDEN-YNELADIYSFGMCMLEMVTF-EYPYSECRN 216
+ P ++ APE + Y+ +D++SFG+ + E + PY N
Sbjct: 265 DGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN 321
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 119 QILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPE 177
+IL L Y HS I+HRD+K N+ I+ ++++ D GLA +V + +
Sbjct: 139 EILKALDYCHS--MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 178 FMAPELY--DENYNELADIYSFGMCMLEMVTF 207
F PEL + Y+ D++S G CML + F
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLG-CMLASMIF 227
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 118 RQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQAN------AKS 171
+ +L+GL Y+H + I+HRD+K N+ I + G +K+ D GLA A +
Sbjct: 132 QMLLNGLYYIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 172 VIGTPEFMAPELY--DENYNELADIYSFGMCMLEMVT 206
+ T + PEL + +Y D++ G M EM T
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 100/249 (40%), Gaps = 58/249 (23%)
Query: 25 YKAFDEVNGLEVAWCQVRIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDD--- 81
Y A+D+ VA +V + + + D +R+ E+ +L LK + IIR Y+ I D
Sbjct: 43 YLAYDKNTEKNVAIKKV--NRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLL 100
Query: 82 QNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS--HDPPIIHRDL 139
+ + I+ E+ S + ++ + IL L+ + H+ IIHRDL
Sbjct: 101 KFDELYIVLEIADSDLKKLFKTPIFLTEEH-----IKTILYNLLLGENFIHESGIIHRDL 155
Query: 140 KCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGTPE---------------------- 177
K N +N + VK+ D GLA + +++ E
Sbjct: 156 KPANCLLNQD-CSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVT 214
Query: 178 --FMAPE--LYDENYNELADIYSFGMCMLEMVTF-------------EYPYSEC------ 214
+ APE L ENY + DI+S G E++ +P S C
Sbjct: 215 RWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPD 274
Query: 215 RNSAQIYKK 223
RNS ++++K
Sbjct: 275 RNSKKVHEK 283
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 70/179 (39%), Gaps = 21/179 (11%)
Query: 50 PEDLE-RLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY-RXXXXX 107
P DL+ + E +LK H NI+R + Q + + I+ EL G + R
Sbjct: 152 PPDLKAKFLQEARILKQYSHPNIVRLIG--VCTQKQPIYIVMELVQGGDFLTFLRTEGAR 209
Query: 108 XXXXXXXGWARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQA 167
+G+ YL S IHRDL N + + +KI D G M +
Sbjct: 210 LRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLVT-EKNVLKISDFG----MSRE 262
Query: 168 NAKSVIGTP--------EFMAPELYDEN-YNELADIYSFGMCMLEMVTF-EYPYSECRN 216
A V ++ APE + Y+ +D++SFG+ + E + PY N
Sbjct: 263 EADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN 321
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 17/189 (8%)
Query: 70 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 129
NI++ + D +KT ++I E + ++ + ++L L Y HS
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHS 164
Query: 130 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPEFMAPELYD--E 186
I+HRD+K N+ I+ ++++ D GLA +V + + F PEL +
Sbjct: 165 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 222
Query: 187 NYNELADIYSFGMCMLEMVTFE-----YPYSECRNSAQIYKKVSSGIKPAALSKVK---D 238
+Y+ D++S G CM + F Y + +I K + + A L+K + D
Sbjct: 223 DYDYSLDMWSLG-CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELD 281
Query: 239 PEVKSFIEK 247
P++++ + +
Sbjct: 282 PQLEALVGR 290
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 20/212 (9%)
Query: 42 RIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY 101
RI+ S E + L E+H+ K H NI+ + ++I D + ++T GS +
Sbjct: 43 RINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE--LWVVTSFMAYGSAKDL 100
Query: 102 RXXXXX-XXXXXXXGWARQ-ILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL- 158
+ Q +L L Y+H +HR +K +I I+ + G+V + L
Sbjct: 101 ICTHFMDGMNELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISVD-GKVYLSGLR 157
Query: 159 -GLATIMEQANAKSVIGTPEF-------MAPELYDEN---YNELADIYSFGMCMLEMVTF 207
L+ I + V P++ ++PE+ +N Y+ +DIYS G+ E+
Sbjct: 158 SNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANG 217
Query: 208 EYPYSECRNSAQIYKKVSSGIKPAALSKVKDP 239
P+ + + + +K+ +G P L P
Sbjct: 218 HVPFKDMPATQMLLEKL-NGTVPCLLDTSTIP 248
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 20/212 (9%)
Query: 42 RIDDVLQSPEDLERLYSEVHLLKSLKHNNIIRFYNSWIDDQNKTVNIITELFTSGSLRQY 101
RI+ S E + L E+H+ K H NI+ + ++I D + ++T GS +
Sbjct: 59 RINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE--LWVVTSFMAYGSAKDL 116
Query: 102 RXXXXX-XXXXXXXGWARQ-ILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDL- 158
+ Q +L L Y+H +HR +K +I I+ + G+V + L
Sbjct: 117 ICTHFMDGMNELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISVD-GKVYLSGLR 173
Query: 159 -GLATIMEQANAKSVIGTPEF-------MAPELYDEN---YNELADIYSFGMCMLEMVTF 207
L+ I + V P++ ++PE+ +N Y+ +DIYS G+ E+
Sbjct: 174 SNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANG 233
Query: 208 EYPYSECRNSAQIYKKVSSGIKPAALSKVKDP 239
P+ + + + +K+ +G P L P
Sbjct: 234 HVPFKDMPATQMLLEKL-NGTVPCLLDTSTIP 264
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGT 175
+A + G+ YL IHRDL NI + G KI D GL+ E K++
Sbjct: 137 FAADVARGMDYLSQKQ--FIHRDLAARNILV-GENYVAKIADFGLSRGQEVYVKKTMGRL 193
Query: 176 P-EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIKPAA 232
P +MA E L Y +D++S+G+ + E+V+ PY A++Y+K+ G +
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG-MTCAELYEKLPQGYRLEK 252
Query: 233 LSKVKDPEVKSFIEKC 248
D EV + +C
Sbjct: 253 PLNCDD-EVYDLMRQC 267
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 116 WARQILSGLIYLHSHDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSVIGT 175
+A + G+ YL IHRDL NI + G KI D GL+ E K++
Sbjct: 147 FAADVARGMDYLSQKQ--FIHRDLAARNILV-GENYVAKIADFGLSRGQEVYVKKTMGRL 203
Query: 176 P-EFMAPE-LYDENYNELADIYSFGMCMLEMVTF-EYPYSECRNSAQIYKKVSSGIKPAA 232
P +MA E L Y +D++S+G+ + E+V+ PY A++Y+K+ G +
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG-MTCAELYEKLPQGYRLEK 262
Query: 233 LSKVKDPEVKSFIEKC 248
D EV + +C
Sbjct: 263 PLNCDD-EVYDLMRQC 277
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 70 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 129
NI++ + D +KT ++I E + ++ + ++L L Y HS
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHS 144
Query: 130 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPEFMAPELYD--E 186
I+HRD+K N+ I+ ++++ D GLA +V + + F PEL +
Sbjct: 145 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 202
Query: 187 NYNELADIYSFGMCMLEMVTF 207
+Y+ D++S G CM + F
Sbjct: 203 DYDYSLDMWSLG-CMFAGMIF 222
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 70 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 129
NI++ + D +KT ++I E + ++ + ++L L Y HS
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHS 143
Query: 130 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPEFMAPELYD--E 186
I+HRD+K N+ I+ ++++ D GLA +V + + F PEL +
Sbjct: 144 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 187 NYNELADIYSFGMCMLEMVTF 207
+Y+ D++S G CM + F
Sbjct: 202 DYDYSLDMWSLG-CMFAGMIF 221
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 70 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 129
NI++ + D +KT ++I E + ++ + ++L L Y HS
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHS 143
Query: 130 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPEFMAPELYD--E 186
I+HRD+K N+ I+ ++++ D GLA +V + + F PEL +
Sbjct: 144 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 187 NYNELADIYSFGMCMLEMVTF 207
+Y+ D++S G CM + F
Sbjct: 202 DYDYSLDMWSLG-CMFAGMIF 221
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 70 NIIRFYNSWIDDQNKTVNIITELFTSGSLRQYRXXXXXXXXXXXXGWARQILSGLIYLHS 129
NI++ + D +KT ++I E + ++ + ++L L Y HS
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTD---FKVLYPTLTDYDIRYYIYELLKALDYCHS 145
Query: 130 HDPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMEQANAKSV-IGTPEFMAPELYD--E 186
I+HRD+K N+ I+ ++++ D GLA +V + + F PEL +
Sbjct: 146 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 203
Query: 187 NYNELADIYSFGMCMLEMVTF 207
+Y+ D++S G CM + F
Sbjct: 204 DYDYSLDMWSLG-CMFAGMIF 223
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.133 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,091,622
Number of Sequences: 62578
Number of extensions: 720960
Number of successful extensions: 4269
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 856
Number of HSP's that attempted gapping in prelim test: 2778
Number of HSP's gapped (non-prelim): 1163
length of query: 652
length of database: 14,973,337
effective HSP length: 105
effective length of query: 547
effective length of database: 8,402,647
effective search space: 4596247909
effective search space used: 4596247909
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)