BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006281
(652 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FMU2|PP380_ARATH Pentatricopeptide repeat-containing protein At5g14080
OS=Arabidopsis thaliana GN=At5g14080 PE=2 SV=2
Length = 634
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/634 (55%), Positives = 484/634 (76%), Gaps = 3/634 (0%)
Query: 3 MRPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLT 62
MRPAT+LA RI + ++ S +R AR W+PL+EQ+LH LG R S+SPSLVARVI+P+LL
Sbjct: 1 MRPATELAVRIGRELLKVSGSSRAARIWSPLIEQSLHGLGFRHSISPSLVARVIDPFLLN 60
Query: 63 HHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVY 122
HHSLALGFFNWA+QQP ++H +SYHSI KSLSLSRQ +A+D++ KQVK NKI LDSSVY
Sbjct: 61 HHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVY 120
Query: 123 RFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSH 182
R +I +L+ G+ Q AF V E ++I P++CN LLA L SDG D A K+F +M H
Sbjct: 121 RSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRH 180
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRV 242
+GV +T+GFGV+I FC +++ Q+L ++DEV+K N INGS+IA+LI+H CK R
Sbjct: 181 KGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKK-ANLNINGSIIALLILHSLCKCSRE 239
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
+AF +L+ELR +CKPDF+AYR++AE F + G+++ER+VVLKKKRKLGVAPR++DYR F
Sbjct: 240 MDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAF 299
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRV 362
IL LI +R+ EAKE+ EVIVSGKF +D+D+L+ALIGSVS++DP SA+ F +M+ G++
Sbjct: 300 ILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKL 359
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + TLS LSKNLC+ +KSD L++ Y++LS+ YF++++SY++M+SFLC +GR+RE+Y
Sbjct: 360 PAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTA 419
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+QEMK++GL PDVS YN+L+EACC+ +++RPAKKLWD+MF GC NL TYN+LI K SE
Sbjct: 420 LQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSE 479
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD-VMLARS 541
GE E +LRLF MLE+G+ PD T Y SL+EGLC+ET ++AA EVF K + D + R
Sbjct: 480 EGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRR 539
Query: 542 ILSTFMISLCRRGHFLVATKLLRGLSSDLGHSDSHVILLKSLADAREVEMAIEHIKWIQE 601
+LS F+++LC GH A++LLR L H+ +HV+LLK +ADA+EVE+ I H++WI+E
Sbjct: 540 VLSEFVLNLCSNGHSGEASQLLRE-REHLEHTGAHVVLLKCVADAKEVEIGIRHMQWIKE 598
Query: 602 SSPTMLQEISAELFASLSSSSYPEPILLLLHALQ 635
SP+++ IS++L AS SSS P+ IL + A++
Sbjct: 599 VSPSLVHTISSDLLASFCSSSDPDSILPFIRAIE 632
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 228/469 (48%), Gaps = 5/469 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++ L +++ S+L ++ ++LD+ Y +I L++G+N A + +E+
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ +I P + + + V++ +G ++ A +FD M G+ + I +C +
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
Q +L E++KR N +I+ ++ G C ++ A+ ++ E+ C+P+ + Y
Sbjct: 399 RQGYELLVEMKKR-NIVISPYTYGT-VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 266 IVAEEFKLMGSVFEREV-VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + F L S F + VLK+ ++ G+AP Y I+GL +R+ EA+ +V
Sbjct: 457 TLIKTF-LQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ A I G + + + SA + M E G +P + L CK+ K E
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
Y+ + D ++Y V+++ L + ++ +A + +EM+ KG+ PDV Y L+
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+ ++ A ++D+M G + N+ YN+L+ F GEIE A L M KG+ P
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+A TY ++++G C+ +L AF +F++ ++ + +T + CR
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 112/497 (22%), Positives = 198/497 (39%), Gaps = 78/497 (15%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ N SP +Y +++K + S ++ +++K++ + + +Y +I + +Q
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRF 468
Query: 136 QKAFSVFNEVKFNCEDIGPEI-C-NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
A V E+K + I P+I C NSL+ L+ +D A EM G++ + +G
Sbjct: 469 GDAMRVLKEMKE--QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
FI + E ++ + E+R E ++ V+ +I+ +CK +V EA +
Sbjct: 527 AFISGYIEASEFASADKYVKEMR--ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV 584
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+ D Y ++ V + E + ++ R G+AP Y I G
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF------- 637
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+LG + + A F+ M+E+G P + + L
Sbjct: 638 --SKLGNM-------------------------QKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
C+ + ++ E+ +S + +Y ++ C SG L EA+ + EMK KGL P
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 434 DVSFYNSLMEACCREDLLRPA--------------------------------------K 455
D Y +L++ CCR + + A
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLN 790
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L D F N TYNI+I + G +E A LFH M + P TYTSLL G
Sbjct: 791 RLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850
Query: 516 CQETNLQAAFEVFNKSV 532
+ F VF++++
Sbjct: 851 DKMGRRAEMFPVFDEAI 867
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 176/410 (42%), Gaps = 42/410 (10%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS--LLAVLASDGYIDNALK 175
D+ Y ++ L + A +F E++ + I P++ + L+ + G + A
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMR--GKGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+FDEM G+ + I + + + FC + ++ + +LDE+ + + +V II G
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK--GLHPNAVTYCTIIDG 706
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
+CK + EAF++ DE++++ PD Y + + + V ER + + K G A
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV-ERAITIFGTNKKGCASS 765
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNF 355
T + I V GK + +VLN L+ + V +N
Sbjct: 766 TAPFNALI---------------NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
MI+ LCK + E++ + + + +Y +++ GR
Sbjct: 811 MIDY---------------LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGR 855
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA-----SGCSGNL 470
E + V E G++PD Y+ ++ A +E + A L DQMFA GC ++
Sbjct: 856 RAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSI 915
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
T L+S F++VGE+E A ++ NM+ PD+ T L+ C +N
Sbjct: 916 STCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 133/608 (21%), Positives = 241/608 (39%), Gaps = 92/608 (15%)
Query: 36 QTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQP-------NFTHSPL--- 85
TL L ++P +V V+ + S L FFNW Q +F+ L
Sbjct: 49 DTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLC 108
Query: 86 SYHSILKSLSLSRQI--------NAIDSVLK--QVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ S K+LS+ ++ S+++ Q V K + D ++ + I
Sbjct: 109 NFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGK-SDDGVLFGILFDGYIAKGYI 167
Query: 136 QKAFSVFNEVKFNCEDIGPEI------CNSLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
++A VF+ +G E+ C LL L +D ++ M R V F
Sbjct: 168 EEAVFVFSS------SMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDV 221
Query: 190 IGFGVFIWKFCE--NAKLGQVLSM------------LDEVRKRENSMINGSVIAV----- 230
+ + I C N +LG+ + +D K + SMI ++ +
Sbjct: 222 KTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYD 281
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I G CK KR+E+A +L E+ L
Sbjct: 282 VLIDGLCKIKRLEDAKSLLVEMD-----------------------------------SL 306
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSA 349
GV+ + Y I GL+ R AK L +VS I + + I +S A
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA 366
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
F+ MI G +P ++L + C+ + E+ + + +Y +V
Sbjct: 367 KALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
+C+SG L AY +++EM G P+V Y +L++ + A ++ +M G + +
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ YN LI S+ ++ A M+E G+ P+A TY + + G + + +A + +
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA-DKYV 545
Query: 530 KSVNHDVMLARSILSTFMIS-LCRRGHFLVATKLLRGLSSD--LGHSDSHVILLKSLADA 586
K + +L +L T +I+ C++G + A R + LG + ++ +L+ L
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 587 REVEMAIE 594
+V+ A E
Sbjct: 606 DKVDDAEE 613
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 171/441 (38%), Gaps = 52/441 (11%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D ALK+ + M +G+ + V I C+ +L S+L E+ S+ N +
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTY-- 315
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
L+I G KG+ + A ++ E+ I + V +E V++K +
Sbjct: 316 SLLIDGLLKGRNADAAKGLVHEMVSH-------GINIKPYMYDCCICVMSKEGVMEKAKA 368
Query: 290 L-------GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSV 341
L G+ P+ Y I G E+ + + EL + I ++ G
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
SS D A MI G P + + L K + ++ + + V K + D+
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL-------------------M 442
YN ++ L + R+ EA + EM GL P+ Y + M
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548
Query: 443 EAC----------------CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
C C++ + A + M G G+ KTY +L++ + ++
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
+ A +F M KG+APD +Y L+ G + N+Q A +F++ V + I +
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 547 MISLCRRGHFLVATKLLRGLS 567
+ CR G A +LL +S
Sbjct: 669 LGGFCRSGEIEKAKELLDEMS 689
Score = 33.9 bits (76), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 105/268 (39%), Gaps = 40/268 (14%)
Query: 53 ARVINPYLLTHHSLALGFFNWASQQP-----------NFTHSPLSYHSILKSLSLSRQIN 101
+ I P + ++ L GF + Q T + + Y+ +L S +I
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLL 161
+L ++ V + ++ Y II + + +AF +F+E+K + + P+ S +
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL--KGLVPD---SFV 734
Query: 162 AVLASDGY-----IDNALKMFDEMSHRGVEFSTIGFGVFI-WKFCENAKLGQVLSMLDEV 215
DG ++ A+ +F + +G ST F I W F K G+ + EV
Sbjct: 735 YTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVF----KFGKT-ELKTEV 788
Query: 216 RKRENSMINGS---------VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
R +++GS V ++I CK +E A ++ +++ P I Y
Sbjct: 789 LNR---LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAP 294
+ + MG E V + G+ P
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAIAAGIEP 873
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 130/548 (23%), Positives = 260/548 (47%), Gaps = 21/548 (3%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
S AL FN AS++PNF+ P Y IL L S + + +L+ +K ++ + +S +
Sbjct: 64 SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLI 123
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PE--ICNSLLAVLASDGYIDNALKMFD-- 178
+I S Q + + SV V + ++ G P+ N +L +L DG N+LK+ +
Sbjct: 124 LIESYAQFELQDEILSV---VDWMIDEFGLKPDTHFYNRMLNLLV-DG---NSLKLVEIS 176
Query: 179 --EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
+MS G++ F V I C +L + ML+++ ++ ++ G+
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSY--GLVPDEKTFTTVMQGY 234
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER-EVVLKKKRKLGVAPR 295
+ ++ A ++ +++ C ++ ++ F G V + + + + G P
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFN 354
+ + GL + A E+ +V++ + D N++I + + + + A+ +
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
MI + P T + L LCK N+ +E E+ +VL++ D+ ++N ++ LC +
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
R A + +EM+ KG +PD YN L+++ C + L A + QM SGC+ ++ TYN
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
LI F + + A +F M GV+ ++ TY +L++GLC+ ++ A ++ ++ +
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 535 DVMLARSILSTFMISLCRRGHFLVATKLLRGLSSDLGHSD--SHVILLKSLADAREVEMA 592
+ ++ + CR G A +++ ++S+ D ++ L+ L A VE+A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 593 IEHIKWIQ 600
+ ++ IQ
Sbjct: 595 SKLLRSIQ 602
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 155/622 (24%), Positives = 266/622 (42%), Gaps = 56/622 (9%)
Query: 24 TRPARKWTPLLEQTLHQLGLRDS---LSPSLVARVINPYLLTHHSLALGFFNWASQQPNF 80
T A +W LL + LR+S ++P + +++ L + S ++ F+W Q +
Sbjct: 51 TDSANEWEKLL-KPFDLDSLRNSFHKITPFQLYKLLE--LPLNVSTSMELFSWTGSQNGY 107
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSL----IQGKNTQ 136
HS Y ++ L + + ID +L Q+K I S++ I+ G+ T+
Sbjct: 108 RHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTR 167
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+ N ++CE N +L +L S A +F +M R + + FGV +
Sbjct: 168 LMLEMRN--VYSCEPTFKSY-NVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVM 224
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
FC ++ LS+L ++ K + + SVI +IH K RV EA ++L+E+ +
Sbjct: 225 KAFCAVNEIDSALSLLRDMTK--HGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C PD + V + E ++ + G AP Y + GL R+ AK
Sbjct: 283 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK 342
Query: 317 ELGEVIVSGKFTIDDDVLNALI-------------------GSVSSIDPRSAIVF----- 352
+L I + I + +++ + G V + +++++
Sbjct: 343 DLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKE 402
Query: 353 ---------FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ M KG P + + + L CK K DE V +SA+ + +
Sbjct: 403 GLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF 462
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N ++S C R+ EA + +EM RKG PDV +NSL+ C D ++ A L M +
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
G N TYN LI+ F GEI+ A +L + M+ +G D TY SL++GLC+ +
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATK-----LLRGLSSDLGHSDSHVI 578
A +F K + + + + LCR G A + +LRG + D+ +S
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS--- 639
Query: 579 LLKSLADAREVEMAIEHIKWIQ 600
L+ L A +E + + +Q
Sbjct: 640 LINGLCRAGRIEDGLTMFRKLQ 661
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/536 (23%), Positives = 222/536 (41%), Gaps = 76/536 (14%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++ ++K+ +I++ S+L+ + + +S +Y+ +I SL + +A + E
Sbjct: 218 FTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEE 277
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ E N ++ L I+ A KM + M RG I +G + C+ +
Sbjct: 278 MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR 337
Query: 205 LGQVLSMLDEVRKRE----NSMINGSVI--------AVL------------------IIH 234
+ + + K E N++I+G V AVL +I+
Sbjct: 338 VDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
G+ K V A +VL ++R + CKP+ +Y I+ + F +G + E VL + G+ P
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFN 354
T + I E RI EA E+ F
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEI----------------------------------FR 483
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M KG P + T ++L LC+ ++ + + + + + + +YN +++ G
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
++EA ++ EM +G D YNSL++ CR + A+ L+++M G + + + N
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
ILI+ G +E A+ M+ +G PD T+ SL+ GLC+ ++ +F K
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 663
Query: 535 DVMLARSILSTFMISLCRRGHFLVATKLLRGLSSDLGHSDSHV-------ILLKSL 583
+ +T M LC+ G A LL D G D V ILL+S+
Sbjct: 664 GIPPDTVTFNTLMSWLCKGGFVYDACLLL-----DEGIEDGFVPNHRTWSILLQSI 714
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 214/508 (42%), Gaps = 66/508 (12%)
Query: 50 SLVARVINPYLLTHHSLALGFFNWAS--------------QQPNFTHSPLSYHSILKSLS 95
++V + NP ++ L GFF + QP+ +Y++++
Sbjct: 114 TMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDV----FAYNALINGFC 169
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGP 154
+I+ VL +++ + D+ Y +I SL A V N++ NC+ P
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ---P 226
Query: 155 EICNSLLAVLAS--DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSML 212
+ + + A+ +G +D ALK+ DEM RG++ +
Sbjct: 227 TVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT------------------ 268
Query: 213 DEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
II G CK V+ AF+++ L ++ C+PD I+Y I+
Sbjct: 269 -------------------IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALL 309
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
G E E ++ K P Y I L + +I EA L +++ T D
Sbjct: 310 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 369
Query: 333 VLNALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
+ LI + +D AI F MI G +P + + + LCK K+D+ +E++
Sbjct: 370 SYDPLIAAFCREGRLD--VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFG 427
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
L + SYN M S L +SG A +I EM G+DPD YNS++ CRE
Sbjct: 428 KLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
++ A +L M + ++ TYNI++ F + IE A+ + +M+ G P+ TTYT
Sbjct: 488 MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVM 537
L+EG+ A E+ N V D +
Sbjct: 548 VLIEGIGFAGYRAEAMELANDLVRIDAI 575
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 150/324 (46%), Gaps = 2/324 (0%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I H C+ E+ +L+ + + PD I + + F + ++ + V++ K G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AI 350
P Y I G RI +A + + + S F+ D N +IGS+ S A+
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
N ++ PT+ T + L + DE +++ + + DM +YN ++ +
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C G + A+ +++ ++ KG +PDV YN L+ A + +KL +MF+ C N+
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TY+ILI+ G+IE A+ L M EKG+ PDA +Y L+ C+E L A E
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 531 SVNHDVMLARSILSTFMISLCRRG 554
++ + +T + +LC+ G
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNG 417
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 184/376 (48%), Gaps = 25/376 (6%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER---EVVLKKKR 288
+I+GFCK R+++A +VLD +R ++ PD + Y I ++GS+ R ++ LK
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI------MIGSLCSRGKLDLALKVLN 217
Query: 289 KL---GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV--SS 343
+L P Y I ++E + EA +L + ++S D N +I +
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ R+ + N + KG P + + + L + L + K +E ++ + + ++ +Y
Sbjct: 278 MVDRAFEMVRNLEL-KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+++++ LC G++ EA +++ MK KGL PD Y+ L+ A CRE L A + + M +
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN--- 520
GC ++ YN +++ + G+ + AL +F + E G +P++++Y ++ L +
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 521 -LQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSDLGHSD--SHV 577
L E+ + ++ D + S++S LCR G A +LL + S H ++
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISC----LCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 578 ILLKSLADAREVEMAI 593
I+L A +E AI
Sbjct: 513 IVLLGFCKAHRIEDAI 528
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 84/170 (49%), Gaps = 2/170 (1%)
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ E+ K PDV YN+L+ C+ + + A ++ D+M + S + TYNI+I
Sbjct: 146 VMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
G+++ AL++ + +L P TYT L+E E + A ++ ++ ++ +
Sbjct: 206 RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265
Query: 543 LSTFMISLCRRGHFLVATKLLRGLSSDLGHSD--SHVILLKSLADAREVE 590
+T + +C+ G A +++R L D S+ ILL++L + + E
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWE 315
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/367 (17%), Positives = 151/367 (41%), Gaps = 17/367 (4%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N + ++Y ++++ L ++ ++ ++ + D Y II + + +A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 139 FSVFNEVKF-NCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
F + ++ CE P++ N LL L + G + K+ +M + + + + +
Sbjct: 283 FEMVRNLELKGCE---PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
I C + K+ + +++L ++ E + + +I FC+ R++ A + L+ +
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMK--EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
C PD + Y V G + + K ++G +P ++ Y L A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV--FFNFMIEKGRV---PTLSTLSN 370
+ ++S D+ N++I + R +V F +++ P++ T +
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLC----REGMVDEAFELLVDMRSCEFHPSVVTYNI 513
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
+ CK ++ ++ + V + + N + +Y V++ + +G EA + ++ R
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRID 573
Query: 431 LDPDVSF 437
+ SF
Sbjct: 574 AISEYSF 580
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 220/493 (44%), Gaps = 21/493 (4%)
Query: 64 HSLALGFFNWASQQPNFT--HSPLSYHSILK-SLSLSRQINAIDSVLKQVKVNKITL--- 117
+L L F NWA+ FT ++ H + K L + QI A D K + +L
Sbjct: 62 QALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFK 121
Query: 118 -----------DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLL-AVLA 165
SSV+ ++ S + KA S+ + + + G N++L A +
Sbjct: 122 SLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIR 181
Query: 166 SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMING 225
S I A +F EM V + + + I FC + L++ D++ + +
Sbjct: 182 SKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETK--GCLPN 239
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
V +I G+CK +++++ FK+L + ++ +P+ I+Y +V G + E VL
Sbjct: 240 VVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLT 299
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI- 344
+ + G + Y I G E +A + ++ T +LI S+
Sbjct: 300 EMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 359
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
+ A+ F + M +G P T + L ++ +E V + ++ N + + +YN
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
+++ C +G++ +A V+++MK KGL PDV Y++++ CR + A ++ +M
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G + TY+ LI F E + A L+ ML G+ PD TYT+L+ C E +L+ A
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 525 FEVFNKSVNHDVM 537
++ N+ V V+
Sbjct: 540 LQLHNEMVEKGVL 552
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 130/551 (23%), Positives = 233/551 (42%), Gaps = 38/551 (6%)
Query: 75 SQQPNFTHSPLSYHSILK-SLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
+Q F LSY+++L ++ R I+ ++V K++ ++++ + Y +I
Sbjct: 160 AQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAG 219
Query: 134 NTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGY-----IDNALKMFDEMSHRGVE 186
N A ++F+ K + P + N+L+ DGY ID+ K+ M+ +G+E
Sbjct: 220 NIDVALTLFD--KMETKGCLPNVVTYNTLI-----DGYCKLRKIDDGFKLLRSMALKGLE 272
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
+ I + V I C ++ +V +L E+ +R S+ V +I G+CK +A
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL--DEVTYNTLIKGYCKEGNFHQAL 330
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
+ E+ P I Y + G++ L + R G+ P Y + G
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTL 365
+ + EA + + F+ NALI G + AI M EKG P +
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
+ S + C+ DE + V + + D +Y+ ++ C R +EA + +E
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M R GL PD Y +L+ A C E L A +L ++M G ++ TY++LI+ ++
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570
Query: 486 IEGALRLFHNML-EKGVAPDATTYT--------------SLLEGLCQETNLQAAFEVFNK 530
A RL + E+ V D T +T SL++G C + + A +VF
Sbjct: 571 TREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFES 630
Query: 531 SVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGL--SSDLGHSDSHVILLKSL---AD 585
+ + + + + CR G A L + + S L H+ + + L+K+L
Sbjct: 631 MLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 690
Query: 586 AREVEMAIEHI 596
E+ I H+
Sbjct: 691 VNELNSVIVHV 701
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 185/408 (45%), Gaps = 8/408 (1%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G +D K+ + M +G++ ++ +G I C KL + E+ ++ ++ +V
Sbjct: 295 GELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ--GILPDTV 352
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+ +I GFCK + A K E+ R+ PD + Y + F +G + E + +
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDP 346
G+ P + + E I G + +A + ++ + + LI G D
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
SA + M + G P + T +++ LCK +E V++ A D +Y +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ C SG + +A +++EM KGL P + +N LM C +L +KL + M A G
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ N T+N L+ ++ ++ A ++ +M +GV PD TY +L++G C+ N++ A+
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 527 VFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLL-----RGLSSD 569
+F + ++ S S + +R FL A ++ GL++D
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 104/205 (50%)
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
KG P + + S + C+ + D++ ++ +V+ + Y ++ LC +L E
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A EM R+G+ PD Y +L++ C+ +R A K + +M + + ++ TY +IS
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
F ++G++ A +LFH M KG+ PD+ T+T L+ G C+ +++ AF V N +
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 539 ARSILSTFMISLCRRGHFLVATKLL 563
+T + LC+ G A +LL
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELL 479
Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 105/487 (21%), Positives = 202/487 (41%), Gaps = 48/487 (9%)
Query: 63 HHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVY 122
HH L L + +T +SY +++ +++ + +++ +K + +S +Y
Sbjct: 266 HHLLLL------MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
Query: 123 RFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEM 180
II L + +A F+E+ + I P+ + +L+ G I A K F EM
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIR--QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 377
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
R + + + I FC+ + + + E+ + + SV +I+G+CK
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK--GLEPDSVTFTELINGYCKAG 435
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+++AF+V + + C P+ + Y + + G + +L + K+G+ P Y
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 301 EFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
+ GL I EA K +GE +G LNA
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAG--------LNA----------------------- 524
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
T + L CK + D+ E+ K + + ++NV+++ C G L +
Sbjct: 525 ----DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
++ M KG+ P+ + +NSL++ C + L+ A ++ M + G + KTY L+
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ ++ A LF M KG + +TY+ L++G + A EVF++ +
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Query: 540 RSILSTF 546
+ I F
Sbjct: 701 KEIFDFF 707
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 124/270 (45%), Gaps = 4/270 (1%)
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS--ID 345
+ G PR D F L+ + EA+ + E +++ + D N + +S
Sbjct: 169 KDWGSDPRVFDV--FFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYK 226
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
+AI+ F E G +++ + + +C+ + E + ++ Y D+ SY+
Sbjct: 227 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 286
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+V+ C G L + + +I+ MKRKGL P+ Y S++ CR L A++ + +M G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+ Y LI F + G+I A + F+ M + + PD TYT+++ G CQ ++ A
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCRRGH 555
++F++ + + + C+ GH
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGH 436
Score = 92.4 bits (228), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 117/236 (49%), Gaps = 20/236 (8%)
Query: 347 RSAIVFFNFMIEKGRVPTLST----LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
R A F M+ G V ++ + L+ LSK+ K+ + V++ ++ S
Sbjct: 192 REARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC---YKTATAIIVFREFPEVGVCWNVAS 248
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN+++ F+C GR++EA+ ++ M+ KG PDV Y++++ CR L KL + M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G N Y +I + ++ A F M+ +G+ PD YT+L++G C+ +++
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 523 AA----FEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLL-----RGLSSD 569
AA +E+ ++ + DV+ +I+S F C+ G + A KL +GL D
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGF----CQIGDMVEAGKLFHEMFCKGLEPD 420
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/521 (22%), Positives = 227/521 (43%), Gaps = 40/521 (7%)
Query: 27 ARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLS 86
RK L Q R+ LS SLV V+ L+ S + FF WA +Q + H+
Sbjct: 116 GRKSQKFLRQ------FREKLSESLVIEVLR--LIARPSAVISFFVWAGRQIGYKHTAPV 167
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y++++ + + L+Q++ + D V+ + L++ +FS+ E
Sbjct: 168 YNALVDLIVRDDDEKVPEEFLQQIRDD----DKEVFGEFLNVLVRKHCRNGSFSIALEEL 223
Query: 147 FNCEDI----GPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+D N L+ +D+A + EMS + F + C+
Sbjct: 224 GRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKV 283
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
K + L++++ + + +V +I G C+ EEA L+ +R C P+ +
Sbjct: 284 GKWREALTLVET-----ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVV 338
Query: 263 AYRIVAEEFKLMGSVFEREV-----VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
Y + L G + ++++ VL G P + + A +
Sbjct: 339 TYSTL-----LCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYK 393
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSSIDPRS--------AIVFFNFMIEKGRVPTLSTLS 369
L + +V V N LIGS+ D S A ++ M+ G V +S
Sbjct: 394 LLKKMVKCGHMPGYVVYNILIGSICG-DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVS 452
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
+ ++ LC K ++ V + + + D +Y+ ++++LC + ++ A+ + +EMKR
Sbjct: 453 SFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRG 512
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
GL DV Y ++++ C+ L+ A+K +++M GC+ N+ TY LI + + ++ A
Sbjct: 513 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
LF ML +G P+ TY++L++G C+ ++ A ++F +
Sbjct: 573 NELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/478 (23%), Positives = 193/478 (40%), Gaps = 41/478 (8%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
+S L S G + A + EM +G T + + C +K+ + +E+++
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 511
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
++ +++ FCK +E+A K +E+R C P+ + Y + + V
Sbjct: 512 --GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 569
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLI----VER------RICEAKELGEVIVSGKF 327
+ + G P Y I G VE+ R+C +K++ +V + K
Sbjct: 570 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK- 628
Query: 328 TIDDD-------VLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
DD+ AL+ G S A + M +G P L LCK
Sbjct: 629 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 688
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K DE EV +S + + + +Y+ ++ R A V+ +M P+V Y
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+++ C+ A KL M GC N+ TY +I F +G+IE L L M K
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFN--KSVNHDVMLA--RSILSTFMISLCRRGH 555
GVAP+ TY L++ C+ L A + K + A R ++ F
Sbjct: 809 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF------NKE 862
Query: 556 FLVATKLLRGLSSDLGHSDS------HVILLKSLADAREVEMAIEHIKWIQESSPTML 607
F+ + GL ++G D+ + +L+ +L A+ +EMA+ ++ + S T++
Sbjct: 863 FIESL----GLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLV 916
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/476 (20%), Positives = 202/476 (42%), Gaps = 33/476 (6%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y +L L + ++ + +++K + D Y ++ S + ++A FNE+
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 146 KFNCEDIG--PEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ ++G P + +L+ + A ++F+ M G + + + I C+
Sbjct: 545 R----EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 202 NAKLGQVLSMLDEV--------------RKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
++ + + + + + +NS V ++ GFCK RVEEA K
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
+LD + + C+P+ I Y + + +G + E + V + + G Y I
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720
Query: 308 -VERRICEAKELGEVI---VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVP 363
V+R+ +K L +++ + I ++++ L V D A M EKG P
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC-KVGKTD--EAYKLMQMMEEKGCQP 777
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ T + + K + +E+ + + + + +Y V++ C +G L A+ ++
Sbjct: 778 NVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLL 837
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+EMK+ + Y ++E +E + + L D++ + L Y +LI +
Sbjct: 838 EEMKQTHWPTHTAGYRKVIEGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKA 895
Query: 484 GEIEGALRLFHNM--LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+E ALRL + + ++TY SL+E LC ++ AF++F++ V+
Sbjct: 896 QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVI 951
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 158/378 (41%), Gaps = 17/378 (4%)
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
I + + S+ + +D KQ N + Y ++ + ++A + + +
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ + ++L+ L G +D A ++ EMS G + + I ++ + +
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+L ++ ENS VI +I G CK + +EA+K++ + + C+P+ + Y + +
Sbjct: 730 KVLSKML--ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
F ++G + +L++ GVAP YR I + A L E + +
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 847
Query: 330 DDDVLNALIGSVSSIDPRSAIVFFNFMIEKGR---VPTLSTLSNLSKNLCKRNKSD---E 383
+I + + I + E G+ P LS L NL K + +
Sbjct: 848 HTAGYRKVIEGFN----KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALR 903
Query: 384 LVEVYKVLSAN--DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
L+E SA DY + +YN ++ LC + ++ A+ + EM +KG+ P++ + SL
Sbjct: 904 LLEEVATFSATLVDYSS---TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSL 960
Query: 442 MEACCREDLLRPAKKLWD 459
++ R + A L D
Sbjct: 961 IKGLFRNSKISEALLLLD 978
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 81/189 (42%), Gaps = 3/189 (1%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P+ ST + L + K ++ D +++ +S + D + LC G+ REA +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
++ + PD FY L+ C L A ++M A+ C N+ TY+ L+
Sbjct: 293 VET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
++ R+ + M+ +G P + SL+ C + A+++ K V M +
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409
Query: 543 LSTFMISLC 551
+ + S+C
Sbjct: 410 YNILIGSIC 418
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 236/505 (46%), Gaps = 38/505 (7%)
Query: 78 PNFTHSPLSY----HSILKSLSLSRQINAIDSVLKQVKVNKI----TLDS---------S 120
PNF H+ LS H +++S LS + + ++++ V+++ +LDS S
Sbjct: 107 PNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDS 166
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
V+ +I + +Q + ++A F ++ + + CN+L+ L G+++ A ++ E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
S GV + + + C++ K+ +V + L +V+ E + V +I +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ--EKGVYPDIVTYNTLISAYSSKG 284
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+EEAF++++ + + P Y V G + V + + G++P + YR
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTID---DDVLNALI--GSVSSIDPRS-----AI 350
++ EA + G+V+ + K D DV+ L+ S+ S+ RS A+
Sbjct: 345 SLLM---------EACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
++FN + E G +P + L + C++ + + + D+ +YN ++ L
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C L EA + EM + L PD L++ C+ L+ A +L+ +M ++
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TYN L+ F +VG+I+ A ++ +M+ K + P +Y+ L+ LC + +L AF V+++
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 531 SVNHDVMLARSILSTFMISLCRRGH 555
++ ++ I ++ + CR G+
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGN 600
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/465 (20%), Positives = 216/465 (46%), Gaps = 20/465 (4%)
Query: 56 INPYLLTHHSLALGF---------FNWASQQPNFTHSP--LSYHSILKSLSLSRQINAID 104
+ P ++T+++L + F + P SP +Y++++ L +
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAK 325
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE-IC-NSLLA 162
V ++ + ++ DS+ YR ++ + + + VF++++ D+ P+ +C +S+++
Sbjct: 326 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR--SRDVVPDLVCFSSMMS 383
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
+ G +D AL F+ + G+ + + + I +C + +++ +E+ ++ +M
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
V I+HG CK K + EA K+ +E+ R PD I+ + +G++
Sbjct: 444 --DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
+ +K ++ + Y + G I AKE+ +VS + + L+ ++
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Query: 343 SIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
S + A ++ MI K PT+ +++ K C+ + + + + + + D
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRK--GLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
SYN ++ + +A+G++++M+ + GL PDV YNS++ CR++ ++ A+ +
Sbjct: 622 SYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLR 681
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
+M G + + TY +I+ F + A R+ ML++G +PD
Sbjct: 682 KMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 121/581 (20%), Positives = 232/581 (39%), Gaps = 53/581 (9%)
Query: 34 LEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKS 93
L+ T G DS+ L+ + L A + FT S + ++++ S
Sbjct: 154 LDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLL----RSKGFTVSIDACNALIGS 209
Query: 94 LSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG 153
L + V +++ + + ++ ++ +L + +K + ++V+ + +
Sbjct: 210 LVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE--KGVY 267
Query: 154 PEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM 211
P+I N+L++ +S G ++ A ++ + M +G + I C++ K + +
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 212 LDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
E+ + S + + ++L+ CK V E KV ++R R+ PD + + + F
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLM--EACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLF 385
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
G++ + + ++ G+ P Y I G + I A L ++ +D
Sbjct: 386 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV 445
Query: 332 DVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
N ++ G A FN M E+ P TL+ L CK +E+++
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Query: 391 L--------------------------SANDYFTDMES---------YNVMVSFLCTSGR 415
+ +A + + DM S Y+++V+ LC+ G
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH 565
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L EA+ V EM K + P V NS+++ CR + ++M + G + +YN
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNT 625
Query: 476 LISKFSEVGEIEGALRLFHNMLEK--GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
LI F + A L M E+ G+ PD TY S+L G C++ ++ A V K +
Sbjct: 626 LIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIE 685
Query: 534 HDVMLARSILSTFMISLCRRGHFLVATK-----LLRGLSSD 569
V RS + + + + A + L RG S D
Sbjct: 686 RGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 146/331 (44%), Gaps = 40/331 (12%)
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID------------PRSAI------- 350
R++ EA E ++ S FT+ D NALIGS+ I RS +
Sbjct: 179 RKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTL 238
Query: 351 -----------------VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
F + + EKG P + T + L + +E E+ +
Sbjct: 239 NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG 298
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS-LMEACCREDLLR 452
+ + +YN +++ LC G+ A V EM R GL PD + Y S LMEAC + D++
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE 358
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
+K++ M + +L ++ ++S F+ G ++ AL F+++ E G+ PD YT L+
Sbjct: 359 -TEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSDLGH 572
+G C++ + A + N+ + + +T + LC+R A KL ++
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 573 SDSH--VILLKSLADAREVEMAIEHIKWIQE 601
DS+ IL+ ++ A+E + ++E
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/390 (18%), Positives = 146/390 (37%), Gaps = 40/390 (10%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y S+L + + V ++ + D + ++ + N KA FN V
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
K I L+ G I A+ + +EM +G + + + C+ L
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
G+ + +E+ +R ++ S ++I G CK ++ A ++ +++ + + D + Y
Sbjct: 462 GEADKLFNEMTER--ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + F +G + + + + P Y + L + + EA + + ++S
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK 579
Query: 326 KFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVP---TLSTL-------SNLSK- 373
+ N++I G S + F MI +G VP + +TL N+SK
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKA 639
Query: 374 --------------------------NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
C++N+ E V + + D +Y M+
Sbjct: 640 FGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMI 699
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ + L EA+ + EM ++G PD F
Sbjct: 700 NGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 181/411 (44%), Gaps = 25/411 (6%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L + +A D L M G+E + I +C KL S+L K
Sbjct: 74 NRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWK 133
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E I S + ++GFC RV EA ++D + + +PD + + L G
Sbjct: 134 LGYEPDTITFSTL----VNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKG 189
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFI----------LGLIVERRICEAKELGEVIVSG 325
V E V++ + + G P Y + L L + R++ E + + +V
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM-EERNIKASVVQY 248
Query: 326 KFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
ID + S D A+ FN M KG + T S+L LC K D+
Sbjct: 249 SIVIDS------LCKDGSFD--DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 300
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
++ + + + D+ +++ ++ G+L EA + EM +G+ PD YNSL++
Sbjct: 301 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C+E+ L A +++D M + GC ++ TY+ILI+ + + ++ +RLF + KG+ P+
Sbjct: 361 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHF 556
TY +L+ G CQ L AA E+F + V+ V + + LC G
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 471
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 174/375 (46%), Gaps = 5/375 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
++L+ L G + AL + D M G + + +G + + C K G LD RK
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC---KSGNSALALDLFRK 235
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E I SV+ ++I CK ++A + +E+ ++ K D + Y + G
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ +L++ + P + I + E ++ EAKEL +++ D N+
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G A F+ M+ KG P + T S L + CK + D+ + +++ +S+
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ +YN +V C SG+L A + QEM +G+ P V Y L++ C L A
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+++++M S + + YNI+I +++ A LF ++ +KGV PD TY ++ GL
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 535
Query: 516 CQETNLQAAFEVFNK 530
C++ +L A +F K
Sbjct: 536 CKKGSLSEADMLFRK 550
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 195/465 (41%), Gaps = 46/465 (9%)
Query: 51 LVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQV 110
L RV +L + GF QP+ ++Y +L L S + +++
Sbjct: 187 LKGRVSEALVLIDRMVEYGF------QPD----EVTYGPVLNRLCKSGNSALALDLFRKM 236
Query: 111 KVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYI 170
+ I Y +I SL + + A S+FNE++ +SL+ L +DG
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D+ KM EM R + + F I F + KL + + +E+ R + ++
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR--GIAPDTITYN 354
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I GFCK + EA ++ D + + C+PD + Y I+ + V + + ++
Sbjct: 355 SLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 414
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
G+ P T Y +LG ++ AKEL
Sbjct: 415 GLIPNTITYNTLVLGFCQSGKLNAAKEL-------------------------------- 442
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
F M+ +G P++ T L LC + ++ +E+++ + + + YN+++ +
Sbjct: 443 --FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C + ++ +A+ + + KG+ PDV YN ++ C++ L A L+ +M GC+ +
Sbjct: 501 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
TYNILI + ++ L M G + D++T +++ L
Sbjct: 561 FTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 196/420 (46%), Gaps = 11/420 (2%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I+ +C+ K++ AF VL +PD I + + F L G V E ++ + ++
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD----DVLNALIGSVSSIDP 346
P I GL ++ R+ EA L + +V F D+ VLN L S +S
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS--- 226
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A+ F M E+ ++ S + +LCK D+ + ++ + D+ +Y+ +
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LC G+ + +++EM + + PDV +++L++ +E L AK+L+++M G
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ + TYN LI F + + A ++F M+ KG PD TY+ L+ C+ +
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 527 VFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSDLGHSDSHV---ILLKSL 583
+F + + ++ +T ++ C+ G A +L + + S G S V ILL L
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR-GVPPSVVTYGILLDGL 465
Query: 584 ADAREVEMAIEHIKWIQESSPTMLQEISAELFASLSSSSYPEPILLLLHALQEKCLDSEI 643
D E+ A+E + +Q+S T+ I + + ++S + L +L +K + ++
Sbjct: 466 CDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDV 525
Score = 112 bits (281), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 160/359 (44%), Gaps = 9/359 (2%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL- 231
AL +F +M R ++ S + + + I C++ LS+ +E+ E I V+
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM---EMKGIKADVVTYSS 285
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I G C + ++ K+L E+ R PD + + + + F G + E + + + G
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS---VSSIDPRS 348
+AP T Y I G E + EA ++ +++VS D + LI S +D
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD--D 403
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
+ F + KG +P T + L C+ K + E+++ + + + +Y +++
Sbjct: 404 GMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 463
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC +G L +A + ++M++ + + YN ++ C + A L+ + G
Sbjct: 464 GLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 523
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
++ TYN++I + G + A LF M E G PD TY L+ + L ++ E+
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVEL 582
Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 5/236 (2%)
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ I AI F MI+ +PT + L + + + D ++ K + N D
Sbjct: 45 GIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHD 104
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
M + +M++ C +L A+ V+ + G +PD +++L+ C E + A L D
Sbjct: 105 MYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVD 164
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+M +L T + LI+ G + AL L M+E G PD TY +L LC+
Sbjct: 165 RMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 224
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKL-----LRGLSSDL 570
N A ++F K ++ + S + SLC+ G F A L ++G+ +D+
Sbjct: 225 NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 139 bits (350), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 217/480 (45%), Gaps = 26/480 (5%)
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
N DI P C +L+ G A K+ + + G I + V I +C+ ++
Sbjct: 133 NVPDIIP--CTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINN 190
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
LS+LD + S+ V I+ C ++++A +VLD + R+C PD I Y I+
Sbjct: 191 ALSVLDRM-----SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTIL 245
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-KELGEVIVSG- 325
E V +L + R G P Y + G+ E R+ EA K L ++ SG
Sbjct: 246 IEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC 305
Query: 326 --KFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ +L ++ + +D + M+ KG P++ T + L LC++
Sbjct: 306 QPNVITHNIILRSMCSTGRWMDAEKLLAD---MLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+++ + + + + SYN ++ C ++ A ++ M +G PD+ YN+++
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
A C++ + A ++ +Q+ + GCS L TYN +I ++ G+ A++L M K + P
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLL 563
D TY+SL+ GL +E + A + F++ + ++ M+ LC+ A L
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
Query: 564 -----RGLSSDLGHSDSHVILLKSLADAREVEMAIEHIKWIQE-SSPTMLQEISAELFAS 617
RG + S+ IL++ LA MA E ++ + E + ++++ SAE A
Sbjct: 543 VFMINRGCKPN---ETSYTILIEGLAYE---GMAKEALELLNELCNKGLMKKSSAEQVAG 596
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 189/423 (44%), Gaps = 10/423 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALK 175
D Y +I + A SV + + + P++ N++L L G + A++
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMS-----VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ D M R I + + I C ++ +G + +LDE+R R V ++++G
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR--GCTPDVVTYNVLVNG 283
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
CK R++EA K L+++ C+P+ I + I+ G + E +L + G +P
Sbjct: 284 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 343
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFN 354
+ I L + + A ++ E + + N L+ G AI +
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+ +G P + T + + LCK K ++ VE+ LS+ + +YN ++ L +G
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ +A ++ EM+ K L PD Y+SL+ RE + A K + + G N T+N
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFN 523
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
++ + + + A+ M+ +G P+ T+YT L+EGL E + A E+ N+ N
Sbjct: 524 SIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583
Query: 535 DVM 537
+M
Sbjct: 584 GLM 586
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 165/350 (47%), Gaps = 8/350 (2%)
Query: 219 ENSMINGSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
EN + +G+V ++ +I GFC+ + +A K+L+ L PD I Y ++ +
Sbjct: 126 ENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKA 185
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G + VL + + V+P Y + L ++ +A E+ + ++ D
Sbjct: 186 GEINNALSVLDR---MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITY 242
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
LI + A+ + M ++G P + T + L +CK + DE ++ + +
Sbjct: 243 TILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ ++ ++N+++ +C++GR +A ++ +M RKG P V +N L+ CR+ LL
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A + ++M GC N +YN L+ F + +++ A+ M+ +G PD TY ++L
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLL 563
LC++ ++ A E+ N+ + +T + L + G A KLL
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL 472
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 114/242 (47%), Gaps = 4/242 (1%)
Query: 323 VSGKFTIDD-DVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
V+ F ++D + N L V + + F M+ G VP + + L + C+ K+
Sbjct: 94 VNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKT 153
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+ ++ ++L + D+ +YNVM+S C +G + A V+ M + PDV YN++
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTI 210
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ + C L+ A ++ D+M C ++ TY ILI + A++L M ++G
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGC 270
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATK 561
PD TY L+ G+C+E L A + N + + + S+C G ++ A K
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEK 330
Query: 562 LL 563
LL
Sbjct: 331 LL 332
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 149/331 (45%), Gaps = 10/331 (3%)
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+EE FK L+ + PD I + F +G + +L+ G P Y
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 302 FILGLIVERRICEAKELGEVI-VSGKFTIDDDVL--NALIGSV-SSIDPRSAIVFFNFMI 357
I G C+A E+ + V + ++ DV+ N ++ S+ S + A+ + M+
Sbjct: 178 MISGY------CKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
++ P + T + L + C+ + +++ + D+ +YNV+V+ +C GRL
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
EA + +M G P+V +N ++ + C A+KL M G S ++ T+NILI
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ G + A+ + M + G P++ +Y LL G C+E + A E + V+
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 538 LARSILSTFMISLCRRGHFLVATKLLRGLSS 568
+T + +LC+ G A ++L LSS
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
Y ++++ D+ES N + + T G L E + ++ M G PD+ +L+ CR
Sbjct: 91 YSSVNSSFALEDVESNNHLRQMVRT-GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR 149
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
R A K+ + + SG ++ TYN++IS + + GEI AL + M V+PD T
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVT 206
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLL---- 563
Y ++L LC L+ A EV ++ + D + + + CR A KLL
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 564 -RGLSSDL 570
RG + D+
Sbjct: 267 DRGCTPDV 274
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 99/244 (40%), Gaps = 14/244 (5%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQI 100
LR SPS+V I L L + + P P LSY+ +L +++
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 395
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--N 158
+ L+++ D Y ++ +L + + A + N+ + + P + N
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ--LSSKGCSPVLITYN 453
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK- 217
+++ LA G A+K+ DEM + ++ TI + + K+ + + E +
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
R N++ S I+ G CK ++ + A L + R CKP+ +Y I+ E G
Sbjct: 514 GIRPNAVTFNS-----IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEG 568
Query: 276 SVFE 279
E
Sbjct: 569 MAKE 572
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 136/624 (21%), Positives = 263/624 (42%), Gaps = 76/624 (12%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAI-- 103
++SPS V+ + + L AL F +W SQ P + HS SY S+L L + + +
Sbjct: 87 AISPSHVSSLFS--LDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFK 144
Query: 104 ---------DSVLKQV-------KVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK- 146
DSV + K+NK Y+ II N+ F + +E+K
Sbjct: 145 IRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQ 204
Query: 147 FNCEDIGPEIC------NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E + ++C N ++ G ++ A + ++ G++ + I +C
Sbjct: 205 VYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYC 264
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ L + +E+ + V +IHG C +R++EA + +++ EC P
Sbjct: 265 QRKDLDSAFKVFNEMPLK--GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPT 322
Query: 261 FIAYRIVAEEFKLMGSVFEREV--VLKKKRKLGVAPRTNDYREFI--------------- 303
Y ++ + L GS + E ++K+ + G+ P + Y I
Sbjct: 323 VRTYTVLIKS--LCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 304 LGLIVER--------------------RICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
LG ++E+ I +A ++ E++ S K + + N LI
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ A+ N M+E+ +P + T ++L C+ D + +++ D +Y
Sbjct: 441 SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
M+ LC S R+ EA + +++KG++P+V Y +L++ C+ + A + ++M +
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
C N T+N LI G+++ A L M++ G+ P +T T L+ L ++ +
Sbjct: 561 KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDH 620
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLL-----RGLSSDLGHSDSHVI 578
A+ F + ++ +TF+ + CR G L A ++ G+S DL S
Sbjct: 621 AYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSS--- 677
Query: 579 LLKSLADAREVEMAIEHIKWIQES 602
L+K D + A + +K ++++
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDT 701
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 122/562 (21%), Positives = 228/562 (40%), Gaps = 39/562 (6%)
Query: 51 LVARVINPYLLTHHSLALGFF---NWASQQPNFTHSPL--------SYHSILKSLSLSRQ 99
+V ++P T+ SL +G+ + S F PL +Y ++ L ++R+
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 100 INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--C 157
I+ + ++K ++ Y +I SL + +A ++ E++ I P I
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEET--GIKPNIHTY 361
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
L+ L S + A ++ +M +G+ + I + I +C K G + +D V
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC---KRGMIEDAVDVVEL 418
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E+ ++ + +I G+CK V +A VL+++ R+ PD + Y + + G+
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+L G+ P Y I L +R+ EA +L + + + + A
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G + A + M+ K +P T + L LC K E + + +
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ + +++ L G AY Q+M G PD Y + ++ CRE L A+
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ +M +G S +L TY+ LI + ++G+ A + M + G P T+ SL++ L
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Query: 516 ---------------CQETNL---QAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFL 557
C +N+ E+ K V H V ++ +C G+
Sbjct: 718 LEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLR 777
Query: 558 VATKLLRGLSSDLGHSDSHVIL 579
VA K+ + + G S S ++
Sbjct: 778 VAEKVFDHMQRNEGISPSELVF 799
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 195/454 (42%), Gaps = 35/454 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+S++ S ++ +L + + D Y +I SL + K ++A +F+
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
++ + + P + +L+ G +D A M ++M + +++ F I C +
Sbjct: 523 LEQ--KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
KL + ++L+E + S +LI H K + A+ ++ KPD
Sbjct: 581 GKLKEA-TLLEEKMVKIGLQPTVSTDTILI-HRLLKDGDFDHAYSRFQQMLSSGTKPDAH 638
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + G + + E ++ K R+ GV+P Y I G G++
Sbjct: 639 TYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY------------GDL- 685
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIE------KGRVPTLSTLSNLSKNLC 376
G+ DVL + + + + ++E KG P L +SN+ +
Sbjct: 686 --GQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMME--- 740
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR-KGLDPDV 435
D +VE+ + + + + +SY ++ +C G LR A V M+R +G+ P
Sbjct: 741 ----FDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSE 796
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
+N+L+ CC+ A K+ D M G L++ +LI + GE E +F N
Sbjct: 797 LVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQN 856
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+L+ G D + +++G+ ++ ++A +E+FN
Sbjct: 857 LLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFN 890
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 2/207 (0%)
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+ YN+L+ + R L+ K+++ +M N+ TYN +++ + ++G +E A +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRG 554
++E G+ PD TYTSL+ G CQ +L +AF+VFN+ + + LC
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 555 HFLVATKLLRGLSSD--LGHSDSHVILLKSLADAREVEMAIEHIKWIQESSPTMLQEISA 612
A L + D ++ +L+KSL + A+ +K ++E+
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 613 ELFASLSSSSYPEPILLLLHALQEKCL 639
L SL S E LL + EK L
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGL 389
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 126/336 (37%), Gaps = 53/336 (15%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ L DG D+A F +M G + + FI +C +L M+ + RE
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM--AKMRE 665
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD---------------FIAY 264
N + +I G+ + AF VL +R C+P +
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ 725
Query: 265 RIVAEEFKLMGSVFEREVV---LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ E M ++ E + V L+K + V P Y + ILG ICE +G +
Sbjct: 726 KGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILG------ICE---VGNL 776
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
V+ K VF + +G P+ + L CK K
Sbjct: 777 RVAEK------------------------VFDHMQRNEGISPSELVFNALLSCCCKLKKH 812
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+E +V + + +ES V++ L G V Q + + G D + +
Sbjct: 813 NEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKII 872
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
++ ++ L+ +L++ M +GC + +TY++LI
Sbjct: 873 IDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/490 (22%), Positives = 212/490 (43%), Gaps = 50/490 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ +A D + + ++M G+ + + + I FC +++ L++L ++ K
Sbjct: 14 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 73
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E S++ S + ++G+C GKR+ +A ++D++ +PD I + + L
Sbjct: 74 LGYEPSIVTLSSL----LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 129
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E ++ + + G P Y + GL I A L + + K D + N
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 336 ALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I S+ A+ F M KG P + T S+L LC + + ++ +
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ ++N ++ G+ EA + +M ++ +DPD+ YNSL+ C D L A
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEV------------------------------- 483
K++++ M + C +L TYN LI F +
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 484 ----GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
G+ + A ++F M+ GV PD TY+ LL+GLC L+ A EVF+ ++ L
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 429
Query: 540 RSILSTFMISLCRRGHF-----LVATKLLRGLSSDLGHSDSHVILLKSLADAREVEMAIE 594
I +T + +C+ G L + L+G+ ++ ++ ++ L R ++ A
Sbjct: 430 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV---TYNTMISGLCSKRLLQEAYA 486
Query: 595 HIKWIQESSP 604
+K ++E P
Sbjct: 487 LLKKMKEDGP 496
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 179/400 (44%), Gaps = 9/400 (2%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-L 231
A+ + D M RG + + + +GV + C+ + ++L+ K E + I V+
Sbjct: 134 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN---KMEAAKIEADVVIFNT 190
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
II CK + V++A + E+ + +P+ + Y + G + +L +
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSVSSIDP-RS 348
+ P + I + E + EA++L + ++ K +ID D+ N+LI D
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMI--KRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A F FM+ K P L T + L K CK + ++ E+++ +S D +Y ++
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L G A V ++M G+ PD+ Y+ L++ C L A +++D M S
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ Y +I + G+++ LF ++ KGV P+ TY +++ GLC + LQ A+ +
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Query: 529 NKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSS 568
K + +T + + R G + +L+R + S
Sbjct: 489 KKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/506 (21%), Positives = 213/506 (42%), Gaps = 66/506 (13%)
Query: 42 GLRDSLSPSLVARVIN----PYLLTHHSLALGFF--NWASQ-------------QPNFTH 82
G R S + +LV +++ P +T +L G F N AS+ QPN
Sbjct: 93 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL-- 150
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
++Y ++ L I+ ++L +++ KI D ++ II SL + ++ A ++F
Sbjct: 151 --VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E++ + I P + +SL++ L S G +A ++ +M + + + + F I F
Sbjct: 209 KEME--TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 266
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ K + + D++ KR I+ + +I+GFC R+++A ++ + + ++C P
Sbjct: 267 KEGKFVEAEKLHDDMIKRS---IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 323
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D Y + + F V + + ++ G+ T Y I GL +
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG--------- 374
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
D +A F M+ G P + T S L LC
Sbjct: 375 -------------------------DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K ++ +EV+ + ++ D+ Y M+ +C +G++ + + + + KG+ P+V YN
Sbjct: 410 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 469
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+++ C + LL+ A L +M G + TYN LI G+ + L M
Sbjct: 470 TMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 529
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAF 525
DA+T L+ + + L +F
Sbjct: 530 RFVGDAST-IGLVANMLHDGRLDKSF 554
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 98/213 (46%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M++ +P++ + L + K K D ++ + + + ++ +YN++++ C +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ A ++ +M + G +P + +SL+ C + A L DQM G + T+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI + A+ L M+++G P+ TY ++ GLC+ ++ AF + NK
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 536 VMLARSILSTFMISLCRRGHFLVATKLLRGLSS 568
+ I +T + SLC+ H A L + + +
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 205/473 (43%), Gaps = 45/473 (9%)
Query: 66 LALGFFNWASQ-QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
LAL F +A + P FTH+ +YHSIL LS +R + ++S++ ++ + + F
Sbjct: 64 LALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLF 123
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE----ICNSLLAVLASDGYIDNALKMFDEM 180
I L++ + + D G + N+LL VL + D MF
Sbjct: 124 I--DLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNS 181
Query: 181 SHR-GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
G+ + + + C+ + +LDE+ ++ V I+ G+
Sbjct: 182 KESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSM--GLVPNLVTYTTILGGYVAR 239
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+E A +VL+E+ R PD Y ++ + + +G E V+ K + P
Sbjct: 240 GDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPN---- 295
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
E G+++ R +C+ K+ GE A F+ M+E+
Sbjct: 296 -EVTYGVMI-RALCKEKKSGE----------------------------ARNMFDEMLER 325
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
+P S + LC+ +K DE +++ + N+ D + ++ +LC GR+ EA
Sbjct: 326 SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEA 385
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ E + KG P + YN+L+ C + L A +LWD M+ C N TYN+LI
Sbjct: 386 RKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEG 444
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
S+ G ++ +R+ MLE G P+ TT+ L EGL + + A ++ + +V
Sbjct: 445 LSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAV 497
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P + T + L K LCK+N + +V + + ++ +Y ++ G + A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
V++EM +G PD + Y LM+ C+ A + D M + N TY ++I
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ + A +F MLE+ PD++ +++ LC++ + A ++ K + ++ M
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 365
Query: 540 RSILSTFMISLCRRGHFLVATKLL 563
++LST + LC+ G A KL
Sbjct: 366 NALLSTLIHWLCKEGRVTEARKLF 389
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/105 (20%), Positives = 49/105 (46%)
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G + N+ T N+L+ + +IE A ++ + G+ P+ TYT++L G ++++A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 525 FEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSD 569
V + ++ + + M C+ G F A ++ + +
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKN 290
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 168/378 (44%), Gaps = 11/378 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM----LD 213
N LL VL G + K+ D++ RGV + + +FI C+ +L + M ++
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
+ K + N +I+G CK + +EA L ++ +PD Y + +
Sbjct: 280 QGPKPDVITYNN------LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
G V E ++ G P YR I GL E A L + + +
Sbjct: 334 GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVIL 393
Query: 334 LNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
N LI +S+ A N M EKG +P + T + L LCK + + KV+
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ YF D+ ++N+++ T ++ A ++ M G+DPDV YNSL+ C+
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
+ + M GC+ NL T+NIL+ +++ AL L M K V PDA T+ +L+
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 513 EGLCQETNLQAAFEVFNK 530
+G C+ +L A+ +F K
Sbjct: 574 DGFCKNGDLDGAYTLFRK 591
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 140/610 (22%), Positives = 256/610 (41%), Gaps = 95/610 (15%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKIT-LDSSVYRFI 125
AL FN ++ F H+ +Y S+++ L + A++ VL ++ N + VY
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGA 82
Query: 126 IPSLIQGKNTQKAFSVFNEVKF-NCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSH 182
+ + + Q+A +VF + F +CE P + N++++VL GY D A K++ M
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCE---PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRD 139
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA-VLIIHGF----- 236
RG+ F + + FC+ ++ L +L+ + + M +V+A ++ GF
Sbjct: 140 RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEM---NVVAYCTVVGGFYEENF 196
Query: 237 ------------------------------CKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
CK V+E K+LD++ R P+ Y +
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256
Query: 267 VAEEF----------KLMGSVFER-------------------------EVVLKKKRKLG 291
+ +++G + E+ EV L K G
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG 316
Query: 292 VAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
+ P + Y I G + A+ + G+ + +G F D +LI G + A
Sbjct: 317 LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG-FVPDQFTYRSLIDGLCHEGETNRA 375
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ FN + KG P + + L K L + E ++ +S +++++N++V+
Sbjct: 376 LALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNG 435
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC G + +A G+++ M KG PD+ +N L+ + + A ++ D M +G +
Sbjct: 436 LCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPD 495
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF---- 525
+ TYN L++ + + E + + M+EKG AP+ T+ LLE LC+ L A
Sbjct: 496 VYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLE 555
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSDLGHSDS---HVILLKS 582
E+ NKSVN D + +++ F C+ G A L R + S S + I++ +
Sbjct: 556 EMKNKSVNPDAVTFGTLIDGF----CKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHA 611
Query: 583 LADAREVEMA 592
+ V MA
Sbjct: 612 FTEKLNVTMA 621
Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 195/429 (45%), Gaps = 35/429 (8%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK-------LGQVLS 210
N + L G +D A++M + +G + I + I+ C+N+K LG++++
Sbjct: 255 NLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVN 314
Query: 211 -MLDEVRKRENSMINGSVIAVLI-------------------------IHGFCKGKRVEE 244
L+ N++I G ++ I G C
Sbjct: 315 EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNR 374
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A + +E + KP+ I Y + + G + E + + + G+ P + +
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVP 363
GL + +A L +V++S + D N LI G + + +A+ + M++ G P
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ T ++L LCK +K ++++E YK + ++ ++N+++ LC +L EA G++
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF-ASGCSGNLKTYNILISKFSE 482
+EMK K ++PD + +L++ C+ L A L+ +M A S + TYNI+I F+E
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTE 614
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
+ A +LF M+++ + PD TY +++G C+ N+ ++ + + + + + +
Sbjct: 615 KLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTT 674
Query: 543 LSTFMISLC 551
L + LC
Sbjct: 675 LGRVINCLC 683
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 131/534 (24%), Positives = 225/534 (42%), Gaps = 53/534 (9%)
Query: 60 LLTHHSLALGFFNWAS----QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKI 115
L++ L LGF + + + F + Y +I+ +L + A + + ++
Sbjct: 167 LMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGF 226
Query: 116 TLDSSVYRFIIPSLIQGKNTQKAFSVF-----------NEVKFN------CE-------- 150
LDS + ++ +G N + A VF N V ++ CE
Sbjct: 227 VLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAF 286
Query: 151 ----DIGPEICNS-------LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+G + C L+ L G ID A +FDEM RG + + + V I
Sbjct: 287 GLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGL 346
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECK 258
C + K+ + + RK I SVI +I+G+CK RV AF++L + R CK
Sbjct: 347 CRDGKIEEANGV---CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACK 403
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
P+ + + E +G ++ +LK+ G++P Y I GL E + A +L
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463
Query: 319 GEVIVSGKFTIDDDVLN--ALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+ F I+ D L A+I + D SA F M+ KG T + L
Sbjct: 464 LSSM--NCFDIEPDCLTFTAIINAFCKQGKADVASA--FLGLMLRKGISLDEVTGTTLID 519
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
+CK K+ + + + + L T S NV++ L +++E ++ ++ + GL P
Sbjct: 520 GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVP 579
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
V Y +L++ R + + ++ + M SGC N+ Y I+I+ + G +E A +L
Sbjct: 580 SVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL 639
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
M + GV+P+ TYT +++G L A E V L I S+ +
Sbjct: 640 SAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 127/560 (22%), Positives = 223/560 (39%), Gaps = 121/560 (21%)
Query: 31 TPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSI 90
TP E+ L ++P++ ++VI+ + + + + FF W + ++ P + +
Sbjct: 51 TPNWEKNSSLKSLVSHMNPNVASQVIS-LQRSDNDICVRFFMWVCKHSSYCFDPTQKNQL 109
Query: 91 LKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF---IIPSLIQG-----KNTQKAFSVF 142
LK + + S +YR +I +LI+ K K F
Sbjct: 110 LK----------------------LIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCF 147
Query: 143 NEVKFNCEDIGPEI---C-NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+E++ E G + C +SLL LA A + M G I + +
Sbjct: 148 DELR---EVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNA 204
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C+N + ++ K + S I ++ GFC+G + +A KV D
Sbjct: 205 LCKNGYTEAAEMFMSKILKI--GFVLDSHIGTSLLLGFCRGLNLRDALKVFD-------- 254
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
V +EV AP + Y I GL CE L
Sbjct: 255 ------------------VMSKEVT--------CAPNSVSYSILIHGL------CEVGRL 282
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
E F + D M EKG P+ T + L K LC R
Sbjct: 283 EEA-----FGLKDQ-----------------------MGEKGCQPSTRTYTVLIKALCDR 314
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
D+ ++ + ++ +Y V++ LC G++ EA GV ++M + + P V Y
Sbjct: 315 GLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITY 374
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
N+L+ C++ + PA +L M C N++T+N L+ VG+ A+ L ML+
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD 434
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNK----SVNHDVMLARSILSTFMISLCRRG 554
G++PD +Y L++GLC+E ++ A+++ + + D + +I++ F C++G
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAF----CKQG 490
Query: 555 HFLVATKLL-----RGLSSD 569
VA+ L +G+S D
Sbjct: 491 KADVASAFLGLMLRKGISLD 510
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
SY++++ LC GRL EA+G+ +M KG P Y L++A C L+ A L+D+M
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM 327
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
GC N+ TY +LI G+IE A + M++ + P TY +L+ G C++ +
Sbjct: 328 IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRV 387
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLR-----GLSSDL 570
AFE+ + M LCR G A LL+ GLS D+
Sbjct: 388 VPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDI 441
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 71/424 (16%), Positives = 162/424 (38%), Gaps = 21/424 (4%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQI 100
L + LSP +V+ + L + S F P L++ +I+ + +
Sbjct: 433 LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKA 492
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSL 160
+ + L + I+LD +I + + T+ A + + P N +
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVI 552
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
L +L+ + L M +++ G+ S + + + + + +L E+ K
Sbjct: 553 LDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL-ELMKLSG 611
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
+ N + II+G C+ RVEEA K+L ++ P+ + Y ++ + + G +
Sbjct: 612 CLPNVYPYTI-IINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRA 670
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
++ + G Y + G ++ ++ + E V D + +N LI
Sbjct: 671 LETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISV 730
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
V + G + L L LCK ++DE ++ + + F +
Sbjct: 731 VEQLG--------------GCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVFLE- 773
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
++ ++++ C+ + + +I + + G P + +++ +E A++L +
Sbjct: 774 KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVME 833
Query: 461 MFAS 464
+ S
Sbjct: 834 LLTS 837
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 191/414 (46%), Gaps = 9/414 (2%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK-- 217
LL+ ++ D + ++++M G+ + + + FC ++L LS L ++ K
Sbjct: 87 LLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLG 146
Query: 218 RENSMIN-GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E S++ GS +++GFC+G RV +A + D++ KP+ + Y + +
Sbjct: 147 HEPSIVTFGS-----LLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
V +L + K G+ P Y I GL R +A + + + D NA
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNA 261
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI V A F+ MI + P + T S L LC ++ DE E++ + +
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
F D+ +Y+++++ C S ++ + EM ++G+ + Y L++ CR L A+
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAE 381
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+++ +M G N+ TYN+L+ + G+IE AL + +M + G+ D TY ++ G+
Sbjct: 382 EIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGM 441
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSD 569
C+ + A++++ +M +T M+ L ++G A L R + D
Sbjct: 442 CKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKED 495
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 148/312 (47%), Gaps = 3/312 (0%)
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVS 342
L K KLG P + + G R+ +A + + +V + + + N +I G
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
S +A+ N M + G P + T ++L LC + + + ++ + + D+ +
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+N ++ GR+ EA +EM R+ LDPD+ Y+ L+ C L A++++ M
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
+ GC ++ TY+ILI+ + + ++E ++LF M ++GV + TYT L++G C+ L
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSDLGHSD--SHVILL 580
A E+F + V V + + LC G A +L + + +D ++ I++
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Query: 581 KSLADAREVEMA 592
+ + A EV A
Sbjct: 439 RGMCKAGEVADA 450
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 129/257 (50%), Gaps = 2/257 (0%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F+ M+ G P + + + LCK + D +++ + + D+ +YN ++S
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS 229
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC+SGR +A ++ M ++ + PDV +N+L++AC +E + A++ +++M
Sbjct: 230 GLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ TY++LI ++ A +F M+ KG PD TY+ L+ G C+ ++ ++F
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Query: 529 NKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSDLGHSD--SHVILLKSLADA 586
+ V+ + + CR G VA ++ R + H + ++ +LL L D
Sbjct: 350 CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN 409
Query: 587 REVEMAIEHIKWIQESS 603
++E A+ + +Q++
Sbjct: 410 GKIEKALVILADMQKNG 426
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 157/351 (44%), Gaps = 11/351 (3%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
SLL + +AL MFD+M G + + + + I C++ QV + LD + +
Sbjct: 156 SLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSK---QVDNALDLLNRM 212
Query: 219 ENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E I V+ +I G C R +A +++ + RE PD + + + G V
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E E ++ + + P Y I GL + R+ EA+E+ +VS D + L
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G S + F M ++G V T + L + C+ K + E+++ +
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV 392
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ +YNV++ LC +G++ +A ++ +M++ G+D D+ YN ++ C+ + A
Sbjct: 393 HPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA-- 450
Query: 457 LWDQMFASGCSG---NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
WD + C G ++ TY ++ + G A LF M E G+ P+
Sbjct: 451 -WDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+FF+ M++ +P+++ S L + K K D ++ +++ + ++ + N++++
Sbjct: 68 LFFH-MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C +L A + +M + G +P + + SL+ CR D + A ++DQM G N+
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
YN +I + +++ AL L + M + G+ PD TY SL+ GLC
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLC 232
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P ++ ++ L+ A + LW+QM G NL T NIL++ F ++ AL
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M++ G P T+ SLL G C+ + A +F++ V I +T + LC+
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 553 RGHFLVATKLLRGLSSD 569
A LL + D
Sbjct: 199 SKQVDNALDLLNRMEKD 215
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 130/559 (23%), Positives = 234/559 (41%), Gaps = 51/559 (9%)
Query: 29 KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
KW P E+ L L L+ + LV ++ + ++ + FF WA ++ NF H +Y
Sbjct: 75 KWGPDAEKALEVLKLK--VDHRLVRSILE--IDVEINVKIQFFKWAGKRRNFQHDCSTYM 130
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNK-ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
++++ L +R + +++V N +++ +V ++ +L + K KA SVF + K
Sbjct: 131 TLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKG 190
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF-STIGFGVFIWKFCENAKLG 206
NS++ +L +G + +++ EM + G F TI + I + + +
Sbjct: 191 RKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRND 250
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ + DE++ +N M I ++ + K +VE+A + +E++ C P Y
Sbjct: 251 SAIRLFDEMK--DNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTE 308
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRT---NDYREFILGLI--VERRICEAKELGEV 321
+ + G V E K + G+ P N+ ILG + VE E+G
Sbjct: 309 LIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMN-ILGKVGRVEELTNVFSEMGMW 367
Query: 322 IVSGKFTIDDDVLNALIGS---------------VSSIDP------------------RS 348
+ + V+ AL S S+ P
Sbjct: 368 RCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEK 427
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A++ M EKG P + +L L K + + E++K L N Y VM+
Sbjct: 428 ALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIK 487
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
G+L EA + EMK +G PDV YN+LM + ++ A L +M +GC
Sbjct: 488 HFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRA 547
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF--- 525
++ ++NI+++ F+ G A+ +F + G+ PD TY +LL + A
Sbjct: 548 DINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMM 607
Query: 526 -EVFNKSVNHDVMLARSIL 543
E+ +K +D + SIL
Sbjct: 608 REMKDKGFEYDAITYSSIL 626
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 140/594 (23%), Positives = 258/594 (43%), Gaps = 63/594 (10%)
Query: 13 ISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFN 72
IS +IS + +P P LE L LS +++ VI + + L FF
Sbjct: 33 ISGEVISILAKKKPIE---PALEP------LVPFLSKNIITSVIKDEV--NRQLGFRFFI 81
Query: 73 WASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQG 132
WAS++ S S+ ++ LS + L+++K +++DS + +I + +
Sbjct: 82 WASRRER-LRSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKM 140
Query: 133 KNTQKAFSVFNEVK-FNCEDIGPEI--CNSLLAVLASDG-YIDNALKMFDEMSHRGVEFS 188
+KA F +K F+C P++ N +L V+ + + A +++EM +
Sbjct: 141 GMAEKAVESFGRMKEFDCR---PDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPN 197
Query: 189 TIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKV 248
FG+ + + + M D++ R S V ++I G C+ ++A K+
Sbjct: 198 LYTFGILMDGLYKKGRTSDAQKMFDDMTGRGIS--PNRVTYTILISGLCQRGSADDARKL 255
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
E++ PD +A+ + + F +G + E +L+ K G Y I GL
Sbjct: 256 FYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFR 315
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLST 367
RR +A EL ++ D + LI +S A+ + M KG P
Sbjct: 316 ARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYC 375
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ + K LC R +E + +S + F D ++ +++ +C +G +REA + E++
Sbjct: 376 YNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIE 435
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM-------------------------- 461
+ G P V+ +N+L++ C+ L+ A+ L +M
Sbjct: 436 KSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVES 495
Query: 462 ------------FA-SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
FA +G S ++ +YN+LI+ F G+I+GAL+L + + KG++PD+ TY
Sbjct: 496 GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTY 555
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKL 562
+L+ GL + + AF++F D + ++ + M CR+ LVA L
Sbjct: 556 NTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNL 607
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 122/289 (42%), Gaps = 2/289 (0%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A +N M++ P L T L L K+ ++ + +++ ++ + +Y +++S
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC G +A + EM+ G PD +N+L++ C+ + A +L G
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
L+ Y+ LI A L+ NML+K + PD YT L++GL + ++ A ++
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361
Query: 529 NKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSDLGHSD--SHVILLKSLADA 586
+ + + + + +LC RG L +S D +H IL+ S+
Sbjct: 362 SSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRN 421
Query: 587 REVEMAIEHIKWIQESSPTMLQEISAELFASLSSSSYPEPILLLLHALQ 635
V A E I++S + L L S + LLLH ++
Sbjct: 422 GLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME 470
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 122/541 (22%), Positives = 200/541 (36%), Gaps = 125/541 (23%)
Query: 138 AFSVFNE-VKFNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
AF+V+NE +K NC P + L+ L G +A KMFD+M+ RG+ + + + +
Sbjct: 182 AFAVYNEMLKCNC---SPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTI 238
Query: 195 FIWKFCENA--------------------------------KLGQVLSMLDEVRKRENSM 222
I C+ KLG+++ + +R E
Sbjct: 239 LISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEK-- 296
Query: 223 INGSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+G V+ + +I G + +R +AF++ + + KPD I Y I+ + G +
Sbjct: 297 -DGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIE 355
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
+ +L G++P T Y I L + E + L + + D LI
Sbjct: 356 DALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILI 415
Query: 339 GSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR------------------- 378
S+ R A F + + G P+++T + L LCK
Sbjct: 416 CSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPA 475
Query: 379 ----------NKS-DELVEVYKVLSAND---YFTD------MESYNVMVSFLCTSGRLRE 418
N+S D +VE +L A +F D + SYNV+++ C +G +
Sbjct: 476 SLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDG 535
Query: 419 AYGVIQEMKRKGLDPDVSFYN---------------------------------SLMEAC 445
A ++ ++ KGL PD YN SLM
Sbjct: 536 ALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWS 595
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
CR+ + A LW + + +T N + F E GE E ALR ++E D
Sbjct: 596 CRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKE-GETERALR---RLIELDTRKDE 651
Query: 506 TT---YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKL 562
T YT L GLCQ A VF+ +++ + LC+R A ++
Sbjct: 652 LTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEV 711
Query: 563 L 563
Sbjct: 712 F 712
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 11/227 (4%)
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
L + N D + + L + D + V++S G +A MK PD
Sbjct: 102 LSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPD 161
Query: 435 VSFYNSLMEACCREDL-LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
V YN ++ RE++ A ++++M CS NL T+ IL+ + G A ++F
Sbjct: 162 VFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMF 221
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF---NKSVNHDVMLARSILSTFMISL 550
+M +G++P+ TYT L+ GLCQ + A ++F S N+ +A + L +
Sbjct: 222 DDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL---LDGF 278
Query: 551 CRRGHFLVATKLLRGLSSD---LGHSDSHVILLKSLADAREVEMAIE 594
C+ G + A +LLR D LG + L+ L AR A E
Sbjct: 279 CKLGRMVEAFELLRLFEKDGFVLGLR-GYSSLIDGLFRARRYTQAFE 324
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 78/423 (18%), Positives = 156/423 (36%), Gaps = 79/423 (18%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y +++ LS + +I +L + I+ D+ Y +I +L ++ S+ +++
Sbjct: 341 YTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSL--QLE 398
Query: 147 FNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + P+ C L+ + +G + A ++F E+ G S F I C++ +
Sbjct: 399 MSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGE 458
Query: 205 LGQVLSMLDEV-----------------RKRENSMINGSVIAV----------------- 230
L + +L ++ R + + +GS++
Sbjct: 459 LKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIV 518
Query: 231 ---LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
++I+GFC+ ++ A K+L+ L+++ PD + Y + +G E + K
Sbjct: 519 SYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAK 578
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA----------- 336
+P YR + +R++ A L + +DD+ N
Sbjct: 579 DDFRHSPAV--YRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETE 636
Query: 337 ------------------------LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
LIG S A++ F+ + EK + T + L
Sbjct: 637 RALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLI 696
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG-VIQEMKRKGL 431
LCKR + D +EV+ N++ N ++S L S E + M+R G
Sbjct: 697 HGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLLESTEKMEIVSQLTNRMERAGY 756
Query: 432 DPD 434
+ D
Sbjct: 757 NVD 759
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 177/374 (47%), Gaps = 3/374 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L +G + +A+ + D M G + + + +G + C++ + + +L ++ +
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R+ + +V +II G CK ++ AF + +E+ I+ K D I Y + F G
Sbjct: 241 RKIKL--DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ +L+ K + P + I + E ++ EA+EL + ++ + D +L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G A + M+ KG P + T + L CK N D+ +E+++ +S
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D +YN ++ C G+L A + QEM + + PD+ Y L++ C A +
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+++++ S ++ YNI+I +++ A LF ++ KGV PD TY ++ GLC
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 517 QETNLQAAFEVFNK 530
++ +L A +F K
Sbjct: 539 KKGSLSEADLLFRK 552
Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 173/380 (45%), Gaps = 7/380 (1%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L +V+A D L + +M +G+ + + I C KL S + ++ K
Sbjct: 78 LFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLG 137
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+V +I+G C RV EA +++D + KP I + L G V +
Sbjct: 138 YE--PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSD 195
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+++ + + G P Y + + + A EL + K +D + +I
Sbjct: 196 AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIID 255
Query: 340 SV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ S+D +A FN M KG + + L + C + D+ ++ + +
Sbjct: 256 GLCKDGSLD--NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ +++ ++ G+LREA + +EM ++G+ PD Y SL++ C+E+ L A
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ D M + GC N++T+NILI+ + + I+ L LF M +GV D TY +L++G C
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 517 QETNLQAAFEVFNKSVNHDV 536
+ L+ A E+F + V+ V
Sbjct: 434 ELGKLEVAKELFQEMVSRRV 453
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 171/371 (46%), Gaps = 13/371 (3%)
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
NEV + GP +L V+ G A+++ +M R ++ + + + I C++
Sbjct: 211 NEVTY-----GP-----VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD 260
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L ++ +E+ + +I +I GFC R ++ K+L ++ R+ PD +
Sbjct: 261 GSLDNAFNLFNEMEIK--GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
A+ + + F G + E E + K+ + G++P T Y I G E ++ +A + +++
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 323 VSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
VS + N LI G + + F M +G V T + L + C+ K
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+ E+++ + + D+ SY +++ LC +G +A + +++++ ++ D+ YN +
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ C + A L+ + G ++KTYNI+I + G + A LF M E G
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 502 APDATTYTSLL 512
+P+ TY L+
Sbjct: 559 SPNGCTYNILI 569
Score = 116 bits (290), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 109/475 (22%), Positives = 206/475 (43%), Gaps = 47/475 (9%)
Query: 51 LVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQV 110
L +V + LL + GF QPN ++Y +LK + S Q +L+++
Sbjct: 189 LNGKVSDAVLLIDRMVETGF------QPN----EVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 111 KVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYI 170
+ KI LD+ Y II L + + AF++FNE++ I +L+ G
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D+ K+ +M R + + F I F + KL + + E+ +R S +V
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS--PDTVTYT 356
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I GFCK ++++A +LD + + C P+ + I+ + + + + +K
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
GV T Y I G ++ AKEL + +VS + R I
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV-------------------RPDI 457
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
V + +++ LC + ++ +E+++ + + D+ YN+++ +
Sbjct: 458 VSYKILLD---------------GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C + ++ +A+ + + KG+ PDV YN ++ C++ L A L+ +M G S N
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
TYNILI G+ + +L + G + DA+T +++ L + L+ +F
Sbjct: 563 CTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRLKKSF 616
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 102/236 (43%), Gaps = 5/236 (2%)
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ I A+ F M P L S L + + + D ++++ K + +
Sbjct: 47 GIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHN 106
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ + ++M++ C +L A+ + ++ + G +PD +++L+ C E + A +L D
Sbjct: 107 LYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVD 166
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+M G L T N L++ G++ A+ L M+E G P+ TY +L+ +C+
Sbjct: 167 RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSG 226
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKL-----LRGLSSDL 570
A E+ K + L S + LC+ G A L ++G +D+
Sbjct: 227 QTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 282
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/511 (22%), Positives = 225/511 (44%), Gaps = 49/511 (9%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A GF +W ++ F SY +++ L+ + +++ + ++ + D + Y +I
Sbjct: 168 ARGFLDWMWKE-GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILI 226
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRG 184
++ K+ + A +++ + + P + N +++ L+ G +D+ LK+++ M
Sbjct: 227 DGFLKEKDHKTAMELWDRL-LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNE 285
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
E + I C+ + + S+ +E+ +R+ S+ V ++ GFC+ +++E
Sbjct: 286 REKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI--DVVTYNTMLGGFCRCGKIKE 343
Query: 245 AFKVLDELRIRECKP--DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
+ L+ RI E K + ++Y I+ + G + E ++ + G A Y F
Sbjct: 344 S---LELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIF 400
Query: 303 ILGLIV-----------------------------------ERRICEAKELGEVIVSGKF 327
I GL V ++R+ EA L + +
Sbjct: 401 IHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGV 460
Query: 328 TIDDDVLNALIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
++ V NALIG + D R A F M + G PT+ + + L LCK K E
Sbjct: 461 ELNSHVCNALIGGLIR-DSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEAS 519
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
K + N + D+++Y++++ LC ++ A + + + GL+ DV +N L+
Sbjct: 520 AFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGL 579
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C L A + M C+ NL TYN L+ F +VG+ A ++ M + G+ PD
Sbjct: 580 CSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDI 639
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+Y ++++GLC + A E F+ + NH +
Sbjct: 640 ISYNTIMKGLCMCRGVSYAMEFFDDARNHGI 670
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 132/578 (22%), Positives = 230/578 (39%), Gaps = 98/578 (16%)
Query: 46 SLSPSLVARVI----NPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQIN 101
SLSP V +++ NP A F+ A++ P + HS + YH IL+ LS +R +N
Sbjct: 7 SLSPKHVLKLLKSEKNP------RAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVN 60
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK--FNCEDIGPEI--C 157
+ +++ ++ + D V +I + + +A VF ++ F CE P I
Sbjct: 61 HVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCE---PAIRSY 117
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+LL +F GV + + V I C+ + + LD + K
Sbjct: 118 NTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWK 177
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF----- 271
V + +I+ K ++++A ++ DE+ R PD Y I+ + F
Sbjct: 178 EG---FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKD 234
Query: 272 -----KLMGSVFEREVV-----------------------LKKKRKLGVAPRTND---YR 300
+L + E V LK ++ R D Y
Sbjct: 235 HKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYS 294
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEK 359
I GL + +A+ + + K +ID N ++G + ++ + M K
Sbjct: 295 SLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK 354
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
V +S + L K L + K DE +++++ A Y D +Y + + LC +G + +A
Sbjct: 355 NSVNIVS-YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKA 413
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL---------------------- 457
GV+QE++ G DV Y S+++ C++ L A L
Sbjct: 414 LGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGG 473
Query: 458 -------------WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
+M +GC + +YNILI + G+ A MLE G PD
Sbjct: 474 LIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPD 533
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNK----SVNHDVML 538
TY+ LL GLC++ + A E++++ + DVM+
Sbjct: 534 LKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMM 571
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 188/438 (42%), Gaps = 21/438 (4%)
Query: 88 HSILKS-LSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
H+I+ S LS +++ + +++K N+ D Y +I L N KA SVFNE+
Sbjct: 258 HNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELD 317
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
I N++L G I +L+++ M H+ + + + + I EN K+
Sbjct: 318 ERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKID 376
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ +M+ + + + + + I HG C V +A V+ E+ D AY
Sbjct: 377 EA-TMIWRLMPAKGYAADKTTYGIFI-HGLCVNGYVNKALGVMQEVESSGGHLDVYAYAS 434
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA----KELGE-- 320
+ + + E ++K+ K GV ++ I GLI + R+ EA +E+G+
Sbjct: 435 IIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG 494
Query: 321 ---VIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+VS I G S+ F M+E G P L T S L LC+
Sbjct: 495 CRPTVVSYNILICGLCKAGKFGEASA--------FVKEMLENGWKPDLKTYSILLCGLCR 546
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
K D +E++ + TD+ +N+++ LC+ G+L +A V+ M+ + ++
Sbjct: 547 DRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVT 606
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
YN+LME + A +W M+ G ++ +YN ++ + A+ F +
Sbjct: 607 YNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDAR 666
Query: 498 EKGVAPDATTYTSLLEGL 515
G+ P T+ L+ +
Sbjct: 667 NHGIFPTVYTWNILVRAV 684
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 131/268 (48%), Gaps = 13/268 (4%)
Query: 331 DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
+ +LNA + + + S +F G P L T + L K CK+ + ++
Sbjct: 118 NTLLNAFVEAKQWVKVESLFAYFE---TAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDW 174
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ + D+ SY+ +++ L +G+L +A + EM +G+ PDV+ YN L++ +E
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKD 234
Query: 451 LRPAKKLWDQMFA-SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
+ A +LWD++ S N+KT+NI+IS S+ G ++ L+++ M + D TY+
Sbjct: 235 HKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYS 294
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSD 569
SL+ GLC N+ A VFN+ + +T + CR G + +L R +
Sbjct: 295 SLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIME-- 352
Query: 570 LGHSD-----SHVILLKSLADAREVEMA 592
H + S+ IL+K L + +++ A
Sbjct: 353 --HKNSVNIVSYNILIKGLLENGKIDEA 378
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 96/196 (48%), Gaps = 3/196 (1%)
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ SYN +++ + + + + + G+ P++ YN L++ C++ A+ D
Sbjct: 114 IRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLD 173
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
M+ G ++ +Y+ +I+ ++ G+++ AL LF M E+GVAPD T Y L++G +E
Sbjct: 174 WMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEK 233
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMIS-LCRRGHFLVATKLLRGLSSDLGHSD--SH 576
+ + A E++++ + + MIS L + G K+ + + D ++
Sbjct: 234 DHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTY 293
Query: 577 VILLKSLADAREVEMA 592
L+ L DA V+ A
Sbjct: 294 SSLIHGLCDAGNVDKA 309
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 199/435 (45%), Gaps = 9/435 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L A+ + D M +G + + +GV + C+ ++L+++
Sbjct: 190 NTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME- 248
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + G +I II G CK K +++A + E+ + +P+ + Y + G
Sbjct: 249 -QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--N 335
+ +L + + P + I + E ++ EA++L + +V K +ID ++ +
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV--KRSIDPSIVTYS 365
Query: 336 ALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+LI D A F FM+ K P + T + L K CK + +E +EV++ +S
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ +YN+++ L +G A + +EM G+ P++ YN+L++ C+ L A
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+++ + S + TYNI+I + G++E LF N+ KGV PD Y +++ G
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSDLGHSD 574
C++ + + A +F + + +T + + R G + +L++ + S D
Sbjct: 546 FCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
Query: 575 SHVILLKS--LADAR 587
+ I L + L D R
Sbjct: 606 ASTIGLVTNMLHDGR 620
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 198/451 (43%), Gaps = 10/451 (2%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN +++++++ L L + + +++ ++ D Y ++ L + +T
Sbjct: 183 QPN----TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
AF++ N+++ + G I N+++ L ++D+AL +F EM +G+ + + + I
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIR 255
C + +L ++ +R+ IN V +I F K ++ EA K+ DE+ R
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERK---INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
P + Y + F + + E + + + P Y I G +R+ E
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 316 KELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
E+ + + N LI G + D A F M+ G P + T + L
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK K ++ + V++ L + + +YN+M+ +C +G++ + + + + KG+ PD
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V YN+++ CR+ A L+ +M G N YN LI G+ E + L
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
M G A DA+T L+ + + L +F
Sbjct: 596 EMRSCGFAGDAST-IGLVTNMLHDGRLDKSF 625
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 209/454 (46%), Gaps = 46/454 (10%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK-- 217
LL+ +A D + + ++M + G+ + + + I FC ++L L++L ++ K
Sbjct: 87 LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 146
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E +++ S + ++G+C KR+ EA ++D++ + +P+ + + + L
Sbjct: 147 YEPNIVTLSSL----LNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E ++ + G P Y + GL C+ D D+ L
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGL------CKRG-------------DTDLAFNL 243
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
+ + ++ +N +I+ LCK D+ + ++K +
Sbjct: 244 LNKMEQGKLEPGVLIYNTIID---------------GLCKYKHMDDALNLFKEMETKGIR 288
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
++ +Y+ ++S LC GR +A ++ +M + ++PDV +++L++A +E L A+KL
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+D+M ++ TY+ LI+ F ++ A ++F M+ K PD TY +L++G C+
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMI-SLCRRGHFLVATKLLRGLSSDLGHSD-- 574
++ EVF + ++ ++ ++ +I L + G +A ++ + + SD +
Sbjct: 409 YKRVEEGMEVF-REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 575 SHVILLKSLADAREVEMAIEHIKWIQESS--PTM 606
++ LL L ++E A+ +++Q S PT+
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%)
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+L +A + EM + P + ++ L+ A + + L +QM G N TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
ILI+ F ++ AL + M++ G P+ T +SLL G C + A + ++
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/478 (22%), Positives = 221/478 (46%), Gaps = 20/478 (4%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSH 182
++ SL++ QK F+ V C+ + P++ + + G ++ A+K+F +M
Sbjct: 245 LLTSLVRANEFQKCCEAFDVV---CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 301
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR--ENSMINGSVIAVLIIHGFCKGK 240
GV + + F I + + +++ +R E ++I S++ + G + K
Sbjct: 302 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL----VKGLTRAK 357
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
R+ +A+ VL E+ + P+ I Y + + F GS+ + + G++ ++ Y
Sbjct: 358 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 417
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS-IDPRSAIVFFNFMIEK 359
I G + A+ L + ++S F ++ ++I + S + SA+ F M+ +
Sbjct: 418 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 477
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
P L+ L LCK K + +E++ + D + N ++ LC +G+L EA
Sbjct: 478 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 537
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ + +E+ +G D YN+L+ CC + L A D+M G + TY+ILI
Sbjct: 538 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 597
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ ++E A++ + + G+ PD TY+ +++G C+ + E F++ ++ +V
Sbjct: 598 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 657
Query: 540 RSILSTFMISLCRRGHFLVATKLL-----RGLSSDLGHSDSHVILLKSLADAREVEMA 592
+ + + + CR G +A +L +G+S + S ++ L+K ++ VE A
Sbjct: 658 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN---SATYTSLIKGMSIISRVEEA 712
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 108/511 (21%), Positives = 200/511 (39%), Gaps = 69/511 (13%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++K L+ +++I VLK++ + VY +I S I+ + KA + +
Sbjct: 344 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL 403
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + N+L+ +G DNA ++ EM G + F I C +
Sbjct: 404 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM 463
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLI-------------------------------- 232
L + E+ R N G ++ LI
Sbjct: 464 FDSALRFVGEMLLR-NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 522
Query: 233 --IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+HG C+ +++EAF++ E+ R C D ++Y + + E + L + K
Sbjct: 523 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 582
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
G+ P Y I GL ++ EA I
Sbjct: 583 GLKPDNYTYSILICGLFNMNKVEEA----------------------------------I 608
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
F++ G +P + T S + CK +++E E + + + + + YN ++
Sbjct: 609 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 668
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C SGRL A + ++MK KG+ P+ + Y SL++ + AK L+++M G N+
Sbjct: 669 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 728
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
Y LI + ++G++ L M K V P+ TYT ++ G ++ N+ A + N+
Sbjct: 729 FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNE 788
Query: 531 SVNHDVMLARSILSTFMISLCRRGHFLVATK 561
++ F+ ++G L A K
Sbjct: 789 MREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN + Y+ ++++ S +++ + + +K I+ +S+ Y +I + +
Sbjct: 655 QPN----TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 710
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALK---MFDEMSHRGVEFSTIGFG 193
+A +F E++ E + P + + A++ G + +K + EM + V + I +
Sbjct: 711 EAKLLFEEMRM--EGLEPNVFH-YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 767
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
V I + + + + +L+E+R E ++ S+ I+G+ K V EAFK DE
Sbjct: 768 VMIGGYARDGNVTEASRLLNEMR--EKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823
Score = 33.5 bits (75), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA---AFEVFNKSVNHDVMLARSILST 545
AL +F + KG+ P TT LL L + Q AF+V K V+ DV L + ++
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINA 282
Query: 546 FMISLCRRGHFLVATKLL 563
F C+ G A KL
Sbjct: 283 F----CKGGKVEEAVKLF 296
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 136/657 (20%), Positives = 281/657 (42%), Gaps = 29/657 (4%)
Query: 2 TMRPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLR-DSLSPSLVARVINPYL 60
+ R + RI + + + + + W+ +L+ +R +SP + R+ +
Sbjct: 20 SFRSHLPITPRIKKLVSDTVSILKTQQNWSQILDDCFADEEVRFVDISPFVFDRIQDV-- 77
Query: 61 LTHHSLALGFFNWAS--QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLD 118
+ + F+W S ++ F + + S LK L+ R N I+ VL ++ + L
Sbjct: 78 ----EIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLT 133
Query: 119 SSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKM 176
++ + + + KA +++ V D P++ CNSLL++L + +A K+
Sbjct: 134 HEALSHVLHAYAESGSLSKAVEIYDYV-VELYDSVPDVIACNSLLSLLVKSRRLGDARKV 192
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
+DEM RG + + C K+ +V L E R + + N V II G+
Sbjct: 193 YDEMCDRGDSVDNYSTCILVKGMCNEGKV-EVGRKLIEGRWGKGCIPN-IVFYNTIIGGY 250
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
CK +E A+ V EL+++ P + + F G + +L + ++ G+ R
Sbjct: 251 CKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGL--RV 308
Query: 297 NDYREFILGLIVER-----RICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AI 350
+ + F+ +I + ++ A+ +G I++ D N LI + + A+
Sbjct: 309 SVW--FLNNIIDAKYRHGYKVDPAESIG-WIIANDCKPDVATYNILINRLCKEGKKEVAV 365
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
F + +KG +P + + L + CK + D ++ ++ D+ +Y +++ L
Sbjct: 366 GFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGL 425
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
SG + +A + ++ +G+ PD + YN LM C+ PAK L+ +M +
Sbjct: 426 VVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDA 485
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
Y LI F G+ + A ++F +EKGV D + ++++G C+ L A N+
Sbjct: 486 YVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNR 545
Query: 531 SVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSDLGHSD--SHVILLKSLADARE 588
++ + ST + ++ A K+ R + + + ++ L+ +
Sbjct: 546 MNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGD 605
Query: 589 VEMAIEHIKWIQ--ESSPTMLQEISAELFASLSSSSYPEPILLLLHALQEKCLDSEI 643
+MA E K +Q + P ++ + + SS+ + + + KC+ +E+
Sbjct: 606 FKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEV 662
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 149/384 (38%), Gaps = 53/384 (13%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ + I + C+ K + LDE K+ +I ++ +I +CK K + A K+L +
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKK--GLIPNNLSYAPLIQAYCKSKEYDIASKLLLQ 405
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ R CKPD + Y I+ + G + + + K GV+P Y + GL R
Sbjct: 406 MAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGR 465
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKG---------- 360
AK L ++ D V LI G + S D A F+ +EKG
Sbjct: 466 FLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNA 525
Query: 361 -------------------------RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
VP T S + K+ +++++ + N
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED-LLRPA 454
++ +Y +++ C G + A +EM+ + L P+V Y +L+ + +E L A
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKA 645
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSE------VGEIEGA--------LRLFHNMLEKG 500
W+ M + C N T+N L+ F + + E +G+ FH M G
Sbjct: 646 VYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDG 705
Query: 501 VAPDATTYTSLLEGLCQETNLQAA 524
+ A Y S L LC ++ A
Sbjct: 706 WSDHAAAYNSALVCLCVHGMVKTA 729
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 87/434 (20%), Positives = 164/434 (37%), Gaps = 66/434 (15%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKV--NKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
++Y ++ L +S ++ D+V +VK+ ++ D+++Y ++ L + A +F
Sbjct: 416 VTYGILIHGLVVSGHMD--DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLF 473
Query: 143 NEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+E+ +I P+ + +L+ G D A K+F +GV+ + I FC
Sbjct: 474 SEMLD--RNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFC 531
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ L + L+ ++ R E ++ II G+ K + + A K+ + +CKP+
Sbjct: 532 RSGMLDEALACMN--RMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPN 589
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ Y + F G E K+ + + P Y I L E E
Sbjct: 590 VVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLE------ 643
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
A+ ++ M+ VP T + L + K+
Sbjct: 644 ---------------------------KAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTS 676
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
KVL+ D +S ++ F MK G + YNS
Sbjct: 677 G-------KVLAEPDGSNHGQS-SLFSEFF-------------HRMKSDGWSDHAAAYNS 715
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL-FHNMLEK 499
+ C +++ A D+M G S + ++ ++ F VG + + F N+ EK
Sbjct: 716 ALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEK 775
Query: 500 GVAPDATTYTSLLE 513
G+ A Y+ +LE
Sbjct: 776 GLEV-AVRYSQVLE 788
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 184/435 (42%), Gaps = 80/435 (18%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL+ +A D + + ++M + G+ + + +FI FC ++L L++L ++ K
Sbjct: 81 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMK-- 138
Query: 220 NSMINGSVIAVL--IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ G I L +++GFC G R+ EA ++D++
Sbjct: 139 --LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV------------------------ 172
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
++G P T + + GL + EA L E +V D A+
Sbjct: 173 -----------EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 221
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN-LSKNLCKRNKSDELVEVYKVLSAND 395
I G +P A+ N M EKG++ + N + LCK D+ +++ +
Sbjct: 222 INGLCKRGEPDLALNLLNKM-EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D+ +YN ++S LC GR +A ++ +M K ++PD+ F+N+L++A +E L A+
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 456 KLWDQMFAS------------------------------------GCSGNLKTYNILISK 479
KL+D+M S G GN TY LI
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
F + + + A +F M+ GV PD TY LL+GLC N++ A VF D+ L
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD 460
Query: 540 RSILSTFMISLCRRG 554
+T + +LC+ G
Sbjct: 461 IVTYTTMIEALCKAG 475
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/499 (20%), Positives = 204/499 (40%), Gaps = 51/499 (10%)
Query: 40 QLGLRDSLSPSLVARVINPYLLTHHSLALGFFN---------WASQQPNFTHSP--LSYH 88
QL L ++ ++ P ++T +SL GF + Q + P +++
Sbjct: 125 QLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 184
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
+++ L + + ++++++ V D Y +I L + A ++ N+++
Sbjct: 185 TLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG 244
Query: 149 CEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQV 208
+ I N+++ L ++D+A +F++M +G++ + I C +
Sbjct: 245 KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDA 304
Query: 209 LSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDEL-RIRECKPDFIAYRI 266
+L ++ ++ IN ++ +I F K ++ EA K+ DE+ + + C PD +AY
Sbjct: 305 SRLLSDMLEKN---INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ + F V E V ++ + G+ T Y I G R
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQAR---------------- 405
Query: 327 FTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
D +A + F M+ G P + T + L LC + +
Sbjct: 406 ------------------DCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALV 447
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
V++ + D D+ +Y M+ LC +G++ + + + + KG+ P+V Y ++M C
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
R+ L A L+ +M G N TYN LI G+ + L M G A DA+
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAS 567
Query: 507 TYTSLLEGLCQETNLQAAF 525
T+ L+ + + L +F
Sbjct: 568 TF-GLVTNMLHDGRLDKSF 585
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/473 (21%), Positives = 199/473 (42%), Gaps = 23/473 (4%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A+G F + F S + + +L +++ + + + S+ +Q++ I+ + Y I
Sbjct: 59 AIGLFGDMVKSRPFP-SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRG 184
+ A ++ K GP I NSLL I A+ + D+M G
Sbjct: 118 NYFCRRSQLSLALAILG--KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS----VIAVLIIHGFCKGK 240
+ T+ F + ++ K + ++++ E ++ G V +I+G CK
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALV------ERMVVKGCQPDLVTYGAVINGLCKRG 229
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAE---EFKLMGSVFEREVVLKKKRKLGVAPRTN 297
+ A +L+++ + + D + Y + + ++K M F+ + K G+ P
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD---LFNKMETKGIKPDVF 286
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFM 356
Y I L R +A L ++ D NALI + V A ++ M
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Query: 357 IE-KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
++ K P + + L K CK + +E +EV++ +S + +Y ++ +
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
A V ++M G+ PD+ YN L++ C + A +++ M ++ TY
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+I + G++E LF ++ KGV P+ TYT+++ G C++ + A +F
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 120/251 (47%), Gaps = 11/251 (4%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ + M+E G P T + L L + NK+ E V + + + D+ +Y +++
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC G A ++ +M++ ++ DV YN++++ C+ + A L+++M G
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ TYN LIS G A RL +MLEK + PD + +L++ +E L A +++
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 529 NKSVNH-----DVMLARSILSTFMISLCRRGHFLVATKLLRGLSSD--LGHSDSHVILLK 581
++ V DV+ +++ F C+ ++ R +S +G++ ++ L+
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGF----CKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 582 SLADAREVEMA 592
AR+ + A
Sbjct: 400 GFFQARDCDNA 410
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F M++ P++ S L + K NK D ++ + + + ++ +Y++ ++
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
+ C +L A ++ +M + G P + NSL+ C + + A L DQM G
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ T+ L+ + + A+ L M+ KG PD TY +++ GLC+ A +
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 529 NKSVNHDVMLARSILSTFMISLCRRGH 555
NK + I +T + LC+ H
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKH 265
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 8/218 (3%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ M++ G P++ TL++L C N+ E V + + Y D ++ +V
Sbjct: 129 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 188
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L + EA +++ M KG PD+ Y +++ C+ A L ++M
Sbjct: 189 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 248
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA---- 524
++ YN +I + ++ A LF+ M KG+ PD TY L+ LC A
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 525 FEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKL 562
++ K++N D++ +++ F+ + G + A KL
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFV----KEGKLVEAEKL 342
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 94/217 (43%), Gaps = 2/217 (0%)
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
NLS+ + + K D+ + ++ + + F + ++ ++S + + + ++M+
Sbjct: 45 NLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL 104
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
G+ ++ Y+ + CR L A + +M G ++ T N L++ F I A
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
+ L M+E G PD T+T+L+ GL Q A + + V +
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224
Query: 550 LCRRGHFLVATKLLRGLSSDLGHSDSHVILLKSLADA 586
LC+RG +A LL + G ++ V++ ++ D
Sbjct: 225 LCKRGEPDLALNLLNKMEK--GKIEADVVIYNTIIDG 259
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 178/401 (44%), Gaps = 11/401 (2%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK-- 217
L + +A D L + +M +G+ + + I FC KL S + ++ K
Sbjct: 94 LFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLG 153
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E + I S + I+G C RV EA +++D + KPD I + L G
Sbjct: 154 YEPNTITFSTL----INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKE 209
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E +++ K + G P Y + + + A EL + +D + +
Sbjct: 210 AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269
Query: 338 IGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
I + S+D +A FN M KG + T + L C + D+ ++ + +
Sbjct: 270 IDGLCKHGSLD--NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ +++V++ G+LREA + +EM +G+ PD Y SL++ C+E+ L A
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++ D M + GC N++T+NILI+ + + I+ L LF M +GV D TY +L++G
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGH 555
C+ L A E+F + V+ V + LC G
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/474 (21%), Positives = 209/474 (44%), Gaps = 60/474 (12%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQIN-AIDSVLKQV----KVNKITLDSSV 121
A+G +PN +++ +++ L L +++ A++ V + V K + IT+++ V
Sbjct: 145 AMGKIIKLGYEPN----TITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLV 200
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCE----DIGPEICNSLLAVLASDGYIDNALKMF 177
+ GK + + V++ C+ GP +L V+ G A+++
Sbjct: 201 NGLCL----SGKEAEAMLLIDKMVEYGCQPNAVTYGP-----VLNVMCKSGQTALAMELL 251
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGF 236
+M R ++ + + + I C++ L ++ +E+ E I ++I ++I GF
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM---EMKGITTNIITYNILIGGF 308
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
C R ++ K+L ++ R+ P+ + + ++ + F G + E E + K+ G+AP T
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFM 356
Y I G E + +A ++ + M
Sbjct: 369 ITYTSLIDGFCKENHLDKANQM----------------------------------VDLM 394
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
+ KG P + T + L CK N+ D+ +E+++ +S D +YN ++ C G+L
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
A + QEM + + P++ Y L++ C A ++++++ S ++ YNI+
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
I +++ A LF ++ KGV P TY ++ GLC++ L A +F K
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 194/449 (43%), Gaps = 41/449 (9%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN ++Y +L + S Q +L++++ I LD+ Y II L + +
Sbjct: 225 QPN----AVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
AF++FNE++ N L+ + G D+ K+ +M R + + + F V I
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
F + KL + + E+ R + ++ +I GFCK +++A +++D + +
Sbjct: 341 DSFVKEGKLREAEELHKEMIHR--GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C P+ + I+ + + + + +K GV T Y I G ++ AK
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
EL F M+ + P + T L LC
Sbjct: 459 EL----------------------------------FQEMVSRKVPPNIVTYKILLDGLC 484
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+S++ +E+++ + + D+ YN+++ +C + ++ +A+ + + KG+ P V
Sbjct: 485 DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK 544
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YN ++ C++ L A+ L+ +M G + + TYNILI G+ +++L +
Sbjct: 545 TYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAF 525
G + DA+T +++ L + L+ +F
Sbjct: 605 KRCGFSVDASTIKMVIDML-SDGRLKKSF 632
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 106/233 (45%), Gaps = 5/233 (2%)
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
I AI F MI +PT+ S L + K + D ++ + K + ++ +
Sbjct: 66 DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
++M++ C +L A+ + ++ + G +P+ +++L+ C E + A +L D+M
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G +L T N L++ G+ A+ L M+E G P+A TY +L +C+
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKL-----LRGLSSDL 570
A E+ K ++ L S + LC+ G A L ++G+++++
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNI 298
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 183/400 (45%), Gaps = 7/400 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ +A D + + ++M G+ + + + I FC +++ L++L ++ K
Sbjct: 89 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E S++ S + ++G+C GKR+ +A ++D++ +PD I + + L
Sbjct: 149 LGYEPSIVTLSSL----LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E ++ + + G P Y + GL I A L + + K + + +
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Query: 336 ALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I S+ A+ F M KG P + T S+L LC + + + +
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ ++N ++ G+L EA + EM ++ +DPD+ Y+SL+ C D L A
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K +++ M + C N+ TYN LI+ F + I+ + LF M ++G+ + TYT+L+ G
Sbjct: 385 KHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHG 444
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRG 554
Q + A VF + V+ V +T + LC+ G
Sbjct: 445 FFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Score = 115 bits (289), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 169/372 (45%), Gaps = 29/372 (7%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV-IAVL 231
A+ + D M RG + + + +GV + C+ + ++L+ K E + I +V I
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN---KMEAAKIEANVVIYST 265
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV----------AEEFKLMGSVFERE 281
+I CK + ++A + E+ + +P+ I Y + ++ +L+ + ER+
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIG 339
+ P + I + E ++ EA++L + ++ K +ID D+ ++LI
Sbjct: 326 I----------NPNVVTFNALIDAFVKEGKLVEAEKLYDEMI--KRSIDPDIFTYSSLIN 373
Query: 340 SVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
D A F MI K P + T + L CK + DE VE+++ +S
Sbjct: 374 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+ +Y ++ + A V ++M G+ P++ YN+L++ C+ L A ++
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+ + S + TYNI+I + G++E LF ++ KGV PD Y +++ G C++
Sbjct: 494 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553
Query: 519 TNLQAAFEVFNK 530
+ A +F K
Sbjct: 554 GLKEEADALFRK 565
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 153/346 (44%), Gaps = 5/346 (1%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L G ID A + ++M +E + + + I C+ L++ E+ EN +
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM---ENKGV 291
Query: 224 NGSVIAVL-IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+VI +I C +R +A ++L ++ R+ P+ + + + + F G + E E
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSV 341
+ + K + P Y I G + R+ EAK + E+++S + N LI G
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ + F M ++G V T + L + D V+K + ++ ++
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN ++ LC +G+L +A V + ++R ++P + YN ++E C+ + L+ +
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
G ++ YN +IS F G E A LF M E G PD+ T
Sbjct: 532 SLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 156/346 (45%), Gaps = 5/346 (1%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
Y ++ L + + AF++ N+++ + I ++++ L + D+AL +F EM
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGK 240
++GV + I + I C + +L ++ +R+ IN +V+ +I F K
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK---INPNVVTFNALIDAFVKEG 344
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
++ EA K+ DE+ R PD Y + F + + E + + + P Y
Sbjct: 345 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 404
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK 359
I G +RI E EL + + LI G + D +A + F M+
Sbjct: 405 TLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 464
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P + T + L LCK K ++ + V++ L + + +YN+M+ +C +G++ +
Sbjct: 465 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+ + + KG+ PDV YN+++ CR+ L A L+ +M G
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 3/313 (0%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
+L K KLG P + G +RI +A L + +V + D LI +
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 343 SIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ S A+ + M+++G P L T + LCKR D + + A ++
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
Y+ ++ LC +A + EM+ KG+ P+V Y+SL+ C + A +L M
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ N+ T+N LI F + G++ A +L+ M+++ + PD TY+SL+ G C L
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSD--LGHSDSHVIL 579
A +F ++ D +T + C+ +L R +S +G++ ++ L
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 580 LKSLADAREVEMA 592
+ AR+ + A
Sbjct: 442 IHGFFQARDCDNA 454
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 101/224 (45%)
Query: 332 DVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
D L + S+ AI F M++ +P++ + L + K K D ++ + + +
Sbjct: 52 DYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM 111
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
++ +YN++++ C ++ A ++ +M + G +P + +SL+ C +
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A L DQM G + T+ LI + A+ L M+++G P+ TY +
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGH 555
+ GLC+ ++ AF + NK + I ST + SLC+ H
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/165 (17%), Positives = 70/165 (42%), Gaps = 13/165 (7%)
Query: 51 LVARVINPYLLTHHSLALGF------------FNWASQQPNFTHSPLSYHSILKSLSLSR 98
++++ P ++T+++L GF F SQ+ + ++Y +++ +R
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR-GLVGNTVTYTTLIHGFFQAR 449
Query: 99 QINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN 158
+ V KQ+ + + + Y ++ L + +KA VF ++ + + N
Sbjct: 450 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 509
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
++ + G +++ +F +S +GV+ I + I FC
Sbjct: 510 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/490 (22%), Positives = 209/490 (42%), Gaps = 50/490 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ +A D + + ++M + + + I FC +++ L++L ++ K
Sbjct: 89 NKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E S++ S + ++G+C GKR+ +A ++D++ +PD I + + L
Sbjct: 149 LGYEPSIVTLSSL----LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E ++ + + G P Y + GL A L + + K D + N
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264
Query: 336 ALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I S+ A+ F M KG P + T S+L LC + + ++ +
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ ++N ++ G+ EA + +M ++ +DPD+ YNSL+ C D L A
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEV------------------------------- 483
K++++ M + C ++ TYN LI F +
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444
Query: 484 ----GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
G+ + A ++F M+ GV PD TY+ LL+GLC L+ A EVF+ ++ L
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 504
Query: 540 RSILSTFMISLCRRGHF-----LVATKLLRGLSSDLGHSDSHVILLKSLADAREVEMAIE 594
I +T + +C+ G L + L+G+ ++ ++ ++ L R ++ A
Sbjct: 505 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV---TYNTMISGLCSKRLLQEAYA 561
Query: 595 HIKWIQESSP 604
+K ++E P
Sbjct: 562 LLKKMKEDGP 571
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 179/400 (44%), Gaps = 9/400 (2%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-L 231
A+ + D M RG + + + +GV + C+ L++L+ K E + I V+
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLN---KMEAAKIEADVVIFNT 265
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
II CK + V++A + E+ + +P+ + Y + G + +L +
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSVSSIDP-RS 348
+ P + I + E + EA++L + ++ K +ID D+ N+L+ D
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMI--KRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A F FM+ K P + T + L K CK + ++ E+++ +S D +Y ++
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L G A V ++M G+ PD+ Y+ L++ C L A +++D M S
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ Y +I + G+++ LF ++ KGV P+ TY +++ GLC + LQ A+ +
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 529 NKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSS 568
K + +T + + R G + +L+R + S
Sbjct: 564 KKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 110/506 (21%), Positives = 213/506 (42%), Gaps = 66/506 (13%)
Query: 42 GLRDSLSPSLVARVIN----PYLLTHHSLALGFF--NWASQ-------------QPNFTH 82
G R S + +LV +++ P +T +L G F N AS+ QPN
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL-- 225
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
++Y ++ L + ++L +++ KI D ++ II SL + ++ A ++F
Sbjct: 226 --VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E++ + I P + +SL++ L S G +A ++ +M + + + + F I F
Sbjct: 284 KEME--TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ K + + D++ KR I+ + +++GFC R+++A ++ + + ++C P
Sbjct: 342 KEGKFVEAEKLYDDMIKRS---IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D + Y + + F V + + ++ G+ T Y I GL +
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG--------- 449
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
D +A F M+ G P + T S L LC
Sbjct: 450 -------------------------DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K ++ +EV+ + ++ D+ Y M+ +C +G++ + + + + KG+ P+V YN
Sbjct: 485 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 544
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+++ C + LL+ A L +M G N TYN LI G+ + L M
Sbjct: 545 TMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSC 604
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAF 525
DA+T L+ + + L +F
Sbjct: 605 RFVGDAST-IGLVANMLHDGRLDKSF 629
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 99/220 (45%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F M++ +P++ + L + K K D ++ + + + + + +YN++++
Sbjct: 69 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 128
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C ++ A ++ +M + G +P + +SL+ C + A L DQM G
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ T+ LI + A+ L M+++G P+ TY ++ GLC+ + A +
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 248
Query: 529 NKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSS 568
NK + I +T + SLC+ H A L + + +
Sbjct: 249 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 18/219 (8%)
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+VE K+LSA M+ ++V++S RL +G+ YN L+
Sbjct: 85 IVEFNKLLSA---IAKMKKFDVVISLGEKMQRLEIVHGLYT-------------YNILIN 128
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
CR + A L +M G ++ T + L++ + I A+ L M+E G P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLL 563
D T+T+L+ GL A + ++ V + LC+RG +A LL
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 248
Query: 564 RGLSSDLGHSDSHVI--LLKSLADAREVEMAIEHIKWIQ 600
+ + +D + ++ SL R V+ A+ K ++
Sbjct: 249 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 287
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%)
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+L +A G+ M + P + +N L+ A + L ++M L TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
ILI+ F +I AL L M++ G P T +SLL G C + A + ++ V
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 200/443 (45%), Gaps = 15/443 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L + +A + L + +M +G+ S + I FC KL S + ++ K
Sbjct: 92 NRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMK 151
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+VI +++G C RV EA +++D + KP I + L G V
Sbjct: 152 LGYE--PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKV 209
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ V++ + + G P Y + + + A EL + +D + +
Sbjct: 210 SDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269
Query: 338 IGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
I + S+D +A FN M KG + T + L C + D+ ++ + +
Sbjct: 270 IDGLCKDGSLD--NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ +++V++ G+LREA +++EM ++G+ P+ YNSL++ C+E+ L A
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++ D M + GC ++ T+NILI+ + + I+ L LF M +GV + TY +L++G
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSS-----D 569
CQ L+ A ++F + V+ V + LC G A ++ + D
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Query: 570 LGHSDSHVILLKSLADAREVEMA 592
+G ++I++ + +A +V+ A
Sbjct: 508 IG---IYMIIIHGMCNASKVDDA 527
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 201/450 (44%), Gaps = 42/450 (9%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L +G + +A+ + D M G + + + +G + C K GQ ++ +RK
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMC---KSGQTALAMELLRK 253
Query: 218 RENSMIN-GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E I +V +II G CK ++ AF + +E+ I+ K D I Y + F G
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ +L+ K ++P + I + E ++ EA +L
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL------------------ 355
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
M+++G P T ++L CK N+ +E +++ ++ +
Sbjct: 356 ----------------LKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ ++N++++ C + R+ + + +EM +G+ + YN+L++ C+ L AKK
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L+ +M + ++ +Y IL+ + GE+E AL +F + + + D Y ++ G+C
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSDLGHSD-- 574
+ + A+++F V L + + LCR+ A L R ++ + GH+
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE-GHAPDE 578
Query: 575 -SHVILLKSLADAREVEMAIEHIKWIQESS 603
++ IL+++ + A E I+ ++ S
Sbjct: 579 LTYNILIRAHLGDDDATTAAELIEEMKSSG 608
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 219/491 (44%), Gaps = 26/491 (5%)
Query: 9 LATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLAL 68
L R+S+A+ K T + TL GL L +V + +L +
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNTLVN-GL------CLNGKVSDAVVLIDRMVET 222
Query: 69 GFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPS 128
GF QPN ++Y +L + S Q +L++++ I LD+ Y II
Sbjct: 223 GF------QPN----EVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 129 LIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFS 188
L + + AF++FNE++ N+L+ + G D+ K+ +M R + +
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 189 TIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKV 248
+ F V I F + KL + +L E+ +R + ++ +I GFCK R+EEA ++
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQR--GIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
+D + + C PD + + I+ + + + + ++ GV T Y + G
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVP-TLS 366
++ AK+L + +VS + D L+ G + + A+ F IEK ++ +
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFG-KIEKSKMELDIG 509
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
+ +C +K D+ +++ L D +YN+M+S LC L +A + ++M
Sbjct: 510 IYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM 569
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
+G PD YN L+ A +D A +L ++M +SG ++ T ++I+ S GE+
Sbjct: 570 TEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS-GEL 628
Query: 487 EGALRLFHNML 497
+ + F +ML
Sbjct: 629 DKS---FLDML 636
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 169/402 (42%), Gaps = 50/402 (12%)
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
NEV + GP +L V+ G A+++ +M R ++ + + + I C++
Sbjct: 227 NEVTY-----GP-----VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD 276
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
L ++ +E+ E +I +I GFC R ++ K+L ++ R+ P+
Sbjct: 277 GSLDNAFNLFNEM---EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ + ++ + F G + E + +LK+ + G+AP T Y I G E R+ EA ++ ++
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 322 IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
++S D N LI G + + F M +G + T + L + C+ K
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA---YGVIQEMKR--------- 428
+ ++++ + + D+ SY +++ LC +G L +A +G I++ K
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 429 -----------------------KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
KG+ D YN ++ CR+D L A L+ +M G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+ + TYNILI + A L M G D +T
Sbjct: 574 HAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVST 615
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 110/245 (44%), Gaps = 9/245 (3%)
Query: 331 DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
D + + L+G I A+ F MI+ +PT+ + L + K + + ++ + K
Sbjct: 58 DKLSSGLVG----IKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ 113
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ + + + ++M++ C +L A+ + ++ + G +PD +N+L+ C E
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ A +L D+M G L T N L++ G++ A+ L M+E G P+ TY
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKL-----LRG 565
+L +C+ A E+ K ++ L S + LC+ G A L ++G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 566 LSSDL 570
+D+
Sbjct: 294 FKADI 298
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 117/531 (22%), Positives = 229/531 (43%), Gaps = 35/531 (6%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
LAL FF + F H+PL++ +++ L++ Q++++ +L+Q+K+ ++ +
Sbjct: 58 LALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISV 117
Query: 126 IPSLIQGKNTQKAFSVFNEVK-FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
I Q ++A +F +K F C D +I N +L L + I ++ +M G
Sbjct: 118 ISVYRQVGLAERAVEMFYRIKEFGC-DPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 176
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR---ENSMINGSVIAVL---------- 231
E + + V + C+N K+ +L E+ + +++ +VI+ +
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR 236
Query: 232 ---------------IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+I+G CK + AF+++ E+ + P+ I+Y + G
Sbjct: 237 ELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQ 296
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL-- 334
+ L + K G P + G + +A +L ++ G F + +V+
Sbjct: 297 IELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG-FGLQPNVVAY 355
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N L+ G S + A+ F+ M E G P + T +L KR D V ++ +
Sbjct: 356 NTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLT 415
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ ++ Y MV LC + +EA +I+ M ++ P V +N+ ++ C L
Sbjct: 416 SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDW 475
Query: 454 AKKLWDQMFASG-CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A+K++ QM C N+ TYN L+ ++ IE A L + +GV ++TY +LL
Sbjct: 476 AEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLL 535
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLL 563
G C A ++ K + ++ +++ C++G A ++L
Sbjct: 536 HGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 89/187 (47%), Gaps = 19/187 (10%)
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
G A + +K G DP V YN +++ E+ ++ ++ M G N+ TY
Sbjct: 125 GLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTY 184
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV---FNK 530
N+L+ + +++GA +L M KG PDA +YT+++ +C+ ++ E+ F
Sbjct: 185 NVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEP 244
Query: 531 SVNHDVMLARSILSTFMISLCRRGHFLVATKLLR-----GLSSDLGHSDSHVILLKSLAD 585
V S+ + + LC+ + A +L+R G+S ++ S+ L+ L +
Sbjct: 245 VV--------SVYNALINGLCKEHDYKGAFELMREMVEKGISPNV---ISYSTLINVLCN 293
Query: 586 AREVEMA 592
+ ++E+A
Sbjct: 294 SGQIELA 300
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 158/378 (41%), Gaps = 17/378 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQG----KNTQKAFS 140
+SY +++ L S QI S L Q+ K ++Y + SL++G T A
Sbjct: 282 ISYSTLINVLCNSGQIELAFSFLTQML--KRGCHPNIY--TLSSLVKGCFLRGTTFDALD 337
Query: 141 VFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
++N++ + P + N+L+ S G I A+ +F M G + +G I
Sbjct: 338 LWNQM-IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLING 396
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
F + L + + +++ + V+ ++ C+ + +EA +++ + C
Sbjct: 397 FAKRGSLDGAVYIWNKMLT--SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCA 454
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKK-KRKLGVAPRTNDYREFILGLIVERRICEAKE 317
P + + G + E V ++ +++ P Y E + GL RI EA
Sbjct: 455 PSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYG 514
Query: 318 LGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
L I N L+ GS ++ P A+ M+ G+ P T++ + C
Sbjct: 515 LTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYC 574
Query: 377 KRNKSDELVEVYKVLSAN--DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
K+ K++ ++ ++S + D+ SY ++ LC S + +++ M G+ P
Sbjct: 575 KQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPS 634
Query: 435 VSFYNSLMEACCREDLLR 452
++ ++ L+ +D++R
Sbjct: 635 IATWSVLINCFILDDIVR 652
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 89/480 (18%), Positives = 174/480 (36%), Gaps = 82/480 (17%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ F + +Y+ +LK+L + +++ +L ++ D+ Y +I S+ +
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCE---- 228
Query: 136 QKAFSVFNEVKFNCEDIGP--EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
+ E + E P + N+L+ L + A ++ EM +G+ + I +
Sbjct: 229 ---VGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYS 285
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRE----------------------------NSMING 225
I C + ++ S L ++ KR N MI G
Sbjct: 286 TLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG 345
Query: 226 -----SVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+V+A ++ GFC + +A V + C P+ Y + F GS+
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDG 405
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
+ K G P Y + L + EA+ L E++ NA I
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVP-TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
G + A F M ++ R P + T + L L K N+ +E + + +
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE--------- 448
+YN ++ C +G A ++ +M G PD N ++ A C++
Sbjct: 526 WSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM 585
Query: 449 -DLLRPAKKLW---------------------------DQMFASGCSGNLKTYNILISKF 480
DL+ ++ W ++M ++G ++ T+++LI+ F
Sbjct: 586 LDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 121/529 (22%), Positives = 233/529 (44%), Gaps = 58/529 (10%)
Query: 70 FFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKV-NKITLDSSVYRFIIPS 128
F A + +F + S+++S + S ++++ +L ++++ N++ ++ S FI+
Sbjct: 63 MFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERS---FIVVF 119
Query: 129 LIQGKN--TQKAFSVFNEV--KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
GK KA +F+ + +F C+ NS+L V+ ++G L+ +D + +
Sbjct: 120 RAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSF-NSVLNVIINEGLYHRGLEFYDYVVNSN 178
Query: 185 VEFST----IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
+ + + F + I C+ + + + + + +R+ + +G L+ G CK +
Sbjct: 179 MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERK-CLPDGYTYCTLM-DGLCKEE 236
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
R++EA +LDE++ C P + Y ++ + G + ++ G P Y
Sbjct: 237 RIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYN 296
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK 359
I GL ++ ++ +A L E +VS K +D LI G V A+ + M E+
Sbjct: 297 TLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER 356
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G S L L K K++E + +++ ++ ++ Y+V+V LC G+ EA
Sbjct: 357 GYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEA 416
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
++ M G P+ Y+SLM+ + L A ++W +M +GCS N Y++LI
Sbjct: 417 KEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDG 476
Query: 480 FSEVGEI-----------------------------------EGALRLFHNML---EKGV 501
VG + + AL+L+H ML E
Sbjct: 477 LCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKS 536
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFN----KSVNHDVMLARSILSTF 546
PD TY LL+GLC + ++ A ++ N + + DV+ + L+T
Sbjct: 537 QPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585
Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 181/414 (43%), Gaps = 28/414 (6%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
+ +I +L + + +A VF + + C G C +L+ L + ID A+ + DEM
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYC-TLMDGLCKEERIDEAVLLLDEM 248
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
G S + + V I C+ L +V ++D + + + V +IHG C
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK--GCVPNEVTYNTLIHGLCLKG 306
Query: 241 RVEEAFKVLDELRIRECKPDFIAY----------RIVAEEFKLMGSVFEREVVLKKKRKL 290
++++A +L+ + +C P+ + Y R + +L+ S+ ER
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER---------- 356
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G + Y I GL E + EA L + + V + L+ G P A
Sbjct: 357 GYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEA 416
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
N MI G +P T S+L K K +E V+V+K + + Y+V++
Sbjct: 417 KEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDG 476
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS---GC 466
LC GR++EA V +M G+ PD Y+S+++ C + A KL+ +M
Sbjct: 477 LCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKS 536
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
++ TYNIL+ +I A+ L ++ML++G PD T + L L +++N
Sbjct: 537 QPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSN 590
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 134/570 (23%), Positives = 232/570 (40%), Gaps = 59/570 (10%)
Query: 61 LTHHSLALGFFNWASQQPNF------------TH--------SPLSYHSILKSLSL---- 96
L H LAL F W +QP TH P + ILK LSL
Sbjct: 47 LVHGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARH--ILKELSLMSGK 104
Query: 97 -SRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
S A+ + + N SVY +I ++ Q + +F + +
Sbjct: 105 SSFVFGALMTTYRLCNSN-----PSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVY 159
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
CN++L + G + EM R + F + I C + ++
Sbjct: 160 TCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLM--- 216
Query: 216 RKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
+K E S +++ ++H +CK R + A ++LD ++ + D Y ++ +
Sbjct: 217 QKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRS 276
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
+ + ++L+ RK + P Y I G E ++ A +L ++S + +
Sbjct: 277 NRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTF 336
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
NALI G +S + + A+ F M KG P+ + L LCK + D Y +
Sbjct: 337 NALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKR 396
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
N +Y M+ LC +G L EA ++ EM + G+DPD+ Y++L+ C+ +
Sbjct: 397 NGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKT 456
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
AK++ +++ G S N Y+ LI +G ++ A+R++ M+ +G D T+ L+
Sbjct: 457 AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVT 516
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSI---------------LSTFMI--SLCRRGH- 555
LC+ + A E F + + D +L ++ L F + + + GH
Sbjct: 517 SLCKAGKVAEA-EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH 575
Query: 556 --FLVATKLLRGLSSDLGHSDSHVILLKSL 583
F LL+GL GH LKSL
Sbjct: 576 PTFFTYGSLLKGLCKG-GHLREAEKFLKSL 604
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 117/535 (21%), Positives = 223/535 (41%), Gaps = 75/535 (14%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ + + ++Y+++L + A +L +K + D Y +I L +
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 279
Query: 136 QKAFSVF----------NEVKFNCED----------IGPEICNSLLAVLAS--------- 166
K + + NEV +N I ++ N +L+ S
Sbjct: 280 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 339
Query: 167 -DGYIDN-----ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
DG+I ALKMF M +G+ S + +GV + C+NA+ L+ +R + N
Sbjct: 340 IDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFD--LARGFYMRMKRN 397
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
+ G + +I G CK ++EA +L+E+ PD + Y + F +G
Sbjct: 398 GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA 457
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+ ++ + ++G++P G+I I +G +
Sbjct: 458 KEIVCRIYRVGLSPN---------GIIYSTLIYNCCRMGCL------------------- 489
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ AI + MI +G T + L +LCK K E E + ++++ +
Sbjct: 490 ------KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
S++ +++ SG +A+ V EM + G P Y SL++ C+ LR A+K
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
+ A + + YN L++ + G + A+ LF M+++ + PD+ TYTSL+ GLC++
Sbjct: 604 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 663
Query: 521 LQAAFEVFNKSVN--HDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSDLGHS 573
A +F K +V+ + + + F+ + + G + A R +LGH+
Sbjct: 664 TVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW-KAGIYFREQMDNLGHT 716
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 113/594 (19%), Positives = 240/594 (40%), Gaps = 51/594 (8%)
Query: 54 RVINPYLLTHHSLALGFFN-----WASQQPN----FTHSP--LSYHSILKSLSLSRQINA 102
R+I+P +T+++L GF N ASQ N F SP +++++++
Sbjct: 292 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLA 162
+ ++ +T Y ++ L + A + +K N +G ++
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG---QVLSMLDEVRKRE 219
L +G++D A+ + +EMS G++ + + I FC+ + +++ + V
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 471
Query: 220 NSMINGSVI----------------AVLIIHG--------------FCKGKRVEEAFKVL 249
N +I ++I +I+ G CK +V EA + +
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 531
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
+ P+ +++ + + G + V + K+G P Y + GL
Sbjct: 532 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTL 368
+ EA++ + + + +D + N L+ ++ S + A+ F M+++ +P T
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSA-NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
++L LC++ K+ + K A + + Y V + +G+ + ++M
Sbjct: 652 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 711
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
G PD+ N++++ R + L +M NL TYNIL+ +S+ ++
Sbjct: 712 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 771
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
+ L+ +++ G+ PD T SL+ G+C+ L+ ++ + V + R + +
Sbjct: 772 TSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 831
Query: 548 ISLCRRGHFLVATKLLR-----GLSSDLGHSDSHVILLKSLADAREVEMAIEHI 596
C G A L++ G+S D D+ V +L +E M + +
Sbjct: 832 SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 885
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/300 (19%), Positives = 135/300 (45%), Gaps = 4/300 (1%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+ ++ F M G P++ T + + ++ K + + K + D+ ++N++
Sbjct: 140 QDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNIL 199
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
++ LC G ++ ++Q+M++ G P + YN+++ C++ + A +L D M + G
Sbjct: 200 INVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV 259
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
++ TYN+LI I L +M ++ + P+ TY +L+ G E + A +
Sbjct: 260 DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQ 319
Query: 527 VFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSDLGHSDSHV---ILLKSL 583
+ N+ ++ + + + G+F A K+ + + G + S V +LL L
Sbjct: 320 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK-GLTPSEVSYGVLLDGL 378
Query: 584 ADAREVEMAIEHIKWIQESSPTMLQEISAELFASLSSSSYPEPILLLLHALQEKCLDSEI 643
E ++A ++ + + + + L + + + ++LL+ + + +D +I
Sbjct: 379 CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 438
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 124/581 (21%), Positives = 232/581 (39%), Gaps = 80/581 (13%)
Query: 45 DSLSPSLVAR--VINPYLLTHHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQI 100
D + P+ V+ +IN Y + L F+ + H P +Y S+LK L +
Sbjct: 537 DGILPNTVSFDCLINGY--GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 594
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICN 158
+ LK + +D+ +Y ++ ++ + N KA S+F E+ I P+
Sbjct: 595 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQ--RSILPDSYTYT 652
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRG------VEFSTIGFGVFIWKFCENAKLGQVLSML 212
SL++ L G A+ E RG V ++ G+F K GQ + +
Sbjct: 653 SLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMF--------KAGQWKAGI 704
Query: 213 DEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
+ +N ++ +I G+ + ++E+ +L E+ + P+ Y I+ +
Sbjct: 705 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 764
Query: 272 KLMGSV-----FEREVVLKKKRKLGVAPRTNDYREFILGL-----------IVERRICEA 315
V R ++L G+ P +LG+ I++ IC
Sbjct: 765 SKRKDVSTSFLLYRSIILN-----GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRG 819
Query: 316 KEL---------------GE---------VIVSGKFTIDDDVLNALIGSVSSIDPR--SA 349
E+ GE V+ S ++D D +A++ SV + + R +
Sbjct: 820 VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMV-SVLNRNHRFQES 878
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ + M ++G P L LC+ V + + A+ + + MV
Sbjct: 879 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
L G+ EA +++ M + L P ++ + +LM CC+ + A +L M G +
Sbjct: 939 LAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 998
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG-LCQETNLQAAFEVF 528
L +YN+LI+ G++ A L+ M G +ATTY +L+ G L +ET A +
Sbjct: 999 LVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIIL 1058
Query: 529 NKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSD 569
+LAR +++ +S + +A + L+ L S+
Sbjct: 1059 KD------LLARGFITSMSLSQDSHRNLKMAMEKLKALQSN 1093
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 99/486 (20%), Positives = 192/486 (39%), Gaps = 39/486 (8%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
T +++ ++ SL + ++ + ++ + + I ++ + +I KAFS
Sbjct: 505 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 564
Query: 141 VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
VF+E+ SLL L G++ A K + T+ + + C
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 624
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFC-KGKRVEEAFKVLDELRIRECKP 259
++ L + +S+ E+ +R S++ S +I G C KGK V
Sbjct: 625 KSGNLAKAVSLFGEMVQR--SILPDSYTYTSLISGLCRKGKTV----------------- 665
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
IA + A+E + G+V +V+ Y F+ G+ +
Sbjct: 666 --IAI-LFAKEAEARGNVLPNKVM---------------YTCFVDGMFKAGQWKAGIYFR 707
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
E + + T D NA+I S + M + P L+T + L KR
Sbjct: 708 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 767
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+Y+ + N D + + +V +C S L +++ +G++ D +
Sbjct: 768 KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 827
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
N L+ CC + A L M + G S + T + ++S + + + + H M +
Sbjct: 828 NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 887
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLV 558
+G++P++ Y L+ GLC+ +++ AF V + + H + S + +L + G
Sbjct: 888 QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADE 947
Query: 559 ATKLLR 564
AT LLR
Sbjct: 948 ATLLLR 953
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 114/532 (21%), Positives = 228/532 (42%), Gaps = 53/532 (9%)
Query: 30 WTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHS 89
W P E TL L + P V V+ L + A+ +F W ++ H P SY+S
Sbjct: 48 WGPSAENTLSALSFKPQ--PEFVIGVLRR--LKDVNRAIEYFRWYERRTELPHCPESYNS 103
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
+L ++ R +A+D +L ++ V + ++ ++ ++ + V ++
Sbjct: 104 LLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFK 163
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+L+ ++ + D L +F +M G E + F I F + ++ L
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR---- 265
S+LDE+ + +S+ V+ + I F K +V+ A+K E+ KPD + Y
Sbjct: 224 SLLDEM--KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIG 281
Query: 266 IVAEEFKLMGSV--FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
++ + +L +V FE L+K R++ P T Y I+G
Sbjct: 282 VLCKANRLDEAVEMFEH---LEKNRRV---PCTYAYNTMIMGY----------------- 318
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
GS D A KG +P++ + + L K K DE
Sbjct: 319 ---------------GSAGKFD--EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
++V++ + D ++ +YN+++ LC +G+L A+ + M++ GL P+V N +++
Sbjct: 362 ALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C+ L A ++++M C+ + T+ LI +VG ++ A +++ ML+
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGH 555
++ YTSL++ + +++ +N + +L+T+M + + G
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGE 532
Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 199/448 (44%), Gaps = 10/448 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y S++ L + +++ + + ++ N+ + Y +I +A+S+
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV-EFSTIGFGVFIWKFCENA 203
+ N +L L G +D ALK+F+EM ST + + I C
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLST--YNILIDMLCRAG 391
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
KL + D ++K + +++ CK ++++EA + +E+ + C PD I
Sbjct: 392 KLDTAFELRDSMQKA--GLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEIT 449
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND--YREFILGLIVERRICEAKELGEV 321
+ + + +G V + V +K L RTN Y I R + ++ +
Sbjct: 450 FCSLIDGLGKVGRVDDAYKVYEKM--LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 322 IVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+++ + D +LN + + + +P F + + VP + S L L K
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
++E E++ + D +YN+++ C G++ +AY +++EMK KG +P V Y S
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+++ + D L A L+++ + N+ Y+ LI F +VG I+ A + +++KG
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ P+ T+ SLL+ L + + A F
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCF 715
Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 103/485 (21%), Positives = 203/485 (41%), Gaps = 47/485 (9%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y++++ + + + S+L++ + Y I+ L + +A VF E+
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
K +D P + N L+ +L G +D A ++ D M G+ + + + + C++
Sbjct: 370 K---KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 426
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
KL + +M +E+ + + +I G K RV++A+KV +++ +C+ + I
Sbjct: 427 KLDEACAMFEEMDYK--VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIV 484
Query: 264 YRIVAEEFKLMGSVFEREVVLK-------------------------------------K 286
Y + + F G + + K K
Sbjct: 485 YTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK 544
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSID 345
R+ P Y I GLI E EL + +D N +I G
Sbjct: 545 ARRF--VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
A M KG PT+ T ++ L K ++ DE +++ + ++ Y+
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++ GR+ EAY +++E+ +KGL P++ +NSL++A + + + A + M
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
C+ N TY ILI+ +V + A + M ++G+ P +YT+++ GL + N+ A
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 526 EVFNK 530
+F++
Sbjct: 783 ALFDR 787
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 142/318 (44%), Gaps = 7/318 (2%)
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+M +E++ R + + ++IHG K E +++ ++ + C D AY IV +
Sbjct: 538 AMFEEIKARR--FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVID 595
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
F G V + +L++ + G P Y I GL R+ EA L E S + +
Sbjct: 596 GFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL 655
Query: 330 DDDVLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
+ + ++LI G V ID A + +++KG P L T ++L L K + +E +
Sbjct: 656 NVVIYSSLIDGFGKVGRID--EAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALV 713
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
++ + + +Y ++++ LC + +A+ QEM+++G+ P Y +++
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLA 773
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ + A L+D+ A+G + YN +I S A LF +G+
Sbjct: 774 KAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNK 833
Query: 507 TYTSLLEGLCQETNLQAA 524
T LL+ L + L+ A
Sbjct: 834 TCVVLLDTLHKNDCLEQA 851
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P+++T + K NK E +V +++ + +Y ++
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMM 187
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ Q+M+ G +P V + +L+ +E + A L D+M +S ++ YN+ I
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
F +VG+++ A + FH + G+ PD TYTS++ LC+ L A E+F + +
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307
Query: 540 RSILSTFMISLCRRGHFLVATKLL 563
+T ++ G F A LL
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLL 331
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 144/350 (41%), Gaps = 42/350 (12%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR- 218
L+ L G+ + ++F M +G T + + I FC+ K+ + +L+E++ +
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 219 -ENSMIN-GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E +++ GSVI G K R++EA+ + +E + + + + + Y + + F +G
Sbjct: 618 FEPTVVTYGSVI-----DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGR 672
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ E ++L++ + G+ P + + L+ +A+E+ E
Sbjct: 673 IDEAYLILEELMQKGLTPNLYTWNSLLDALV------KAEEINE---------------- 710
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
A+V F M E P T L LCK K ++ ++ +
Sbjct: 711 ------------ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
SY M+S L +G + EA + K G PD + YN+++E + A
Sbjct: 759 KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFS 818
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
L+++ G + KT +L+ + +E A + + E G A A
Sbjct: 819 LFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKARHAA 868
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 107/267 (40%), Gaps = 8/267 (2%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
F SY ++ L + N + +K LD+ Y +I + KA+
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+ E+K + S++ LA +D A +F+E + +E + + + I F
Sbjct: 608 QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF 667
Query: 200 CENAKLGQVLSMLDEVRKR---ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
+ ++ + +L+E+ ++ N S++ L+ K + + EA ++ +
Sbjct: 668 GKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALV-----KAEEINEALVCFQSMKELK 722
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C P+ + Y I+ + + V ++ +K G+ P T Y I GL I EA
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSS 343
L + + D NA+I +S+
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSN 809
Score = 39.3 bits (90), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 69 GFFNWAS-QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
F W Q+ S +SY +++ L+ + I ++ + K N DS+ Y +I
Sbjct: 746 AFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIE 805
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNA 173
L G AFS+F E + I + C LL L + ++ A
Sbjct: 806 GLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 64/155 (41%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
Q T + +++S+L +L + +IN + +K K T + Y +I L + +
Sbjct: 685 QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFN 744
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
KAF + E++ ++++ LA G I A +FD G + + I
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL 231
+ S+ +E R+R + N + + +L
Sbjct: 805 EGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/496 (21%), Positives = 204/496 (41%), Gaps = 37/496 (7%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
Q T S ++ + +L+ I ++V ++ V + DSS Y+ ++ +
Sbjct: 174 QNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKI 233
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
Q+A + C +L L +G ++ A+ F +M G + + I F
Sbjct: 234 QEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSL 293
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-RI 254
I C+ + Q ML+E+ + N +I G CK E+AF++ +L R
Sbjct: 294 IDGLCKKGSIKQAFEMLEEMVR--NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
KP+ Y + + + E++ + ++ G+ P N Y I G C+
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGH------CK 405
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
A G A N M ++G +P + T + +
Sbjct: 406 AGSFGR----------------------------AYELMNLMGDEGFMPNIYTYNAAIDS 437
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK++++ E E+ + D +Y +++ C + +A M + G + D
Sbjct: 438 LCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEAD 497
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+ N L+ A CR+ ++ +++L+ + + G +TY +IS + + G+I+ AL+ FH
Sbjct: 498 MRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFH 557
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRG 554
NM G PD+ TY SL+ GLC+++ + A +++ ++ + T C+R
Sbjct: 558 NMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRN 617
Query: 555 HFLVATKLLRGLSSDL 570
A LL L L
Sbjct: 618 DSANAMILLEPLDKKL 633
>sp|O81908|PPR2_ARATH Pentatricopeptide repeat-containing protein At1g02060,
chloroplastic OS=Arabidopsis thaliana GN=At1g02060 PE=2
SV=2
Length = 710
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 191/475 (40%), Gaps = 84/475 (17%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
L FF+W S + F+H S+ +L+ L +R +N + L F I
Sbjct: 84 GLRFFDWVSNK-GFSHKEQSFFLMLEFLGRARNLNVARNFL----------------FSI 126
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVE 186
G C + NSL+ + G ++K+F M G+
Sbjct: 127 ERRSNG----------------CVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGIS 170
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
S + F + + + G + DE+R R + S +I+GFCK V+EAF
Sbjct: 171 PSVLTFNSLLSILLKRGRTGMAHDLFDEMR-RTYGVTPDSYTFNTLINGFCKNSMVDEAF 229
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK--KRKLGVAPRTNDYREFIL 304
++ ++ + C PD + Y + + G V VL K+ V P Y +
Sbjct: 230 RIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVR 289
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT 364
G C +E+ E A++ F+ M+ +G P
Sbjct: 290 G------YCMKQEIDE----------------------------AVLVFHDMLSRGLKPN 315
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT----DMESYNVMVSFLCTSGRLREAY 420
T + L K L + ++ DE+ ++ ++ ND FT D ++N+++ C +G L A
Sbjct: 316 AVTYNTLIKGLSEAHRYDEIKDI--LIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAM 373
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF-------ASGCSGNLKTY 473
V QEM L PD + Y+ L+ C + A+ L++++F C Y
Sbjct: 374 KVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAY 433
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N + G+ + A ++F ++++GV D +Y +L+ G C+E + A+E+
Sbjct: 434 NPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELL 487
Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 101/253 (39%), Gaps = 46/253 (18%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P T + L CK + DE ++K + D+ +YN ++ LC +G+++ A
Sbjct: 204 GVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIA 263
Query: 420 YGVIQEMKRKGLD--PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+ V+ M +K D P+V Y +L+ C + + A ++ M + G N TYN LI
Sbjct: 264 HNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI 323
Query: 478 SKFSEV-------------------------------------GEIEGALRLFHNMLEKG 500
SE G ++ A+++F ML
Sbjct: 324 KGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMK 383
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR-------SILSTFMISLCRR 553
+ PD+ +Y+ L+ LC A +FN+ +V+L + + + LC
Sbjct: 384 LHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCAN 443
Query: 554 GHFLVATKLLRGL 566
G A K+ R L
Sbjct: 444 GKTKQAEKVFRQL 456
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 100/541 (18%), Positives = 204/541 (37%), Gaps = 54/541 (9%)
Query: 34 LEQTLHQLGLRDSLSPSLVARVINPYLLTHHSL------------ALGFFNWASQQPNFT 81
L QT+ Q+G I+P +LT +SL A F+ + T
Sbjct: 160 LFQTMKQMG-------------ISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVT 206
Query: 82 HSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSV 141
++++++ + ++ + K +++ D Y II L + + A +V
Sbjct: 207 PDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNV 266
Query: 142 FNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+ + D+ P + + +L+ ID A+ +F +M RG++ + + + I
Sbjct: 267 LSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGL 326
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
E + ++ +L + + ++I C ++ A KV E+ + P
Sbjct: 327 SEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHP 386
Query: 260 DFIAYRIVAE------EFK----LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
D +Y ++ EF L +FE+EV+L K +A N E+ L
Sbjct: 387 DSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEY---LCAN 443
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
+ +A+++ ++ + G + A M+ + VP L T
Sbjct: 444 GKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYE 503
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK-- 427
L L K ++ + + + + Y +++ +++ L E++ ++ M
Sbjct: 504 LLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEK 563
Query: 428 --RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
R+ +D L + +E + L+D +G L L+ E +
Sbjct: 564 RIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYD-------NGYLVKMEELLGYLCENRK 616
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV---NHDVMLARSI 542
+ A L LEK D T +++EGLC+ AF ++N+ V NH + +
Sbjct: 617 LLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVV 676
Query: 543 L 543
L
Sbjct: 677 L 677
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 95/475 (20%), Positives = 184/475 (38%), Gaps = 101/475 (21%)
Query: 64 HSLALGFFNWASQ-QPNFTHSPLSYHSILKSLSLSRQINAI-----DSVLKQVKVNKITL 117
H++ G A+ PN +SY ++++ + ++I+ D + + +K N +T
Sbjct: 264 HNVLSGMLKKATDVHPNV----VSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTY 319
Query: 118 D------SSVYRFI-IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDG 168
+ S +R+ I ++ G N AF+ F P+ C N L+ G
Sbjct: 320 NTLIKGLSEAHRYDEIKDILIGGN--DAFTTF----------APDACTFNILIKAHCDAG 367
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVI 228
++D A+K+F EM + + + + V I C + + ++ +E+ ++E
Sbjct: 368 HLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKE--------- 418
Query: 229 AVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
VL+ GK ECKP AY + E G + E V ++
Sbjct: 419 -VLL------GKD--------------ECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLM 457
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPR 347
K GV + Y+ I G E + A EL +++ +F D + LI + I +
Sbjct: 458 KRGVQDPPS-YKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEAL 516
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE-------LVE-------------- 386
A M+ +P +T ++ L KR ++E ++E
Sbjct: 517 LAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVV 576
Query: 387 --------------VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
+ ++L N Y ME ++ +LC + +L +A+ ++ K
Sbjct: 577 RLLFSSAQKEKAFLIVRLLYDNGYLVKMEE---LLGYLCENRKLLDAHTLVLFCLEKSQM 633
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
D+ N+++E C+ A L++++ G L + +L + G+ E
Sbjct: 634 VDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWE 688
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 198/445 (44%), Gaps = 15/445 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ +A + + + ++M G+ + +FI FC ++L L++L ++ K
Sbjct: 87 NKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK 146
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E ++ S + ++G+C KR+ +A ++D++ KPD + + L
Sbjct: 147 LGYEPDIVTLSSL----LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E ++ + + G P Y + GL I A L + + GK D + N
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262
Query: 336 ALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I + A+ F M KG P + T S+L LC + + + +
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ +++ ++ G+L EA + EM ++ +DPD+ Y+SL+ C D L A
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K +++ M + C N+ TY+ LI F + +E + LF M ++G+ + TYT+L+ G
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 515 LCQETNLQAAFEVFNKSVN---HDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSDLG 571
Q + A VF + V+ H +L +IL + LC+ G A + L
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNIL---LDGLCKNGKLAKAMVVFEYLQRSTM 499
Query: 572 HSD--SHVILLKSLADAREVEMAIE 594
D ++ I+++ + A +VE E
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWE 524
Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 199/452 (44%), Gaps = 47/452 (10%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QP+ ++Y +++ L I+ S+LK+++ KI D +Y II L + K+
Sbjct: 220 QPDL----VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD 275
Query: 137 KAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
A ++F E+ + + I P++ +SL++ L + G +A ++ +M R + + + F
Sbjct: 276 DALNLFTEM--DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-IIHGFCKGKRVEEAFKVLDELR 253
I F + KL + + DE+ KR I+ + +I+GFC R++EA + + +
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRS---IDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
++C P+ + Y + + F V E + ++ + G+ T Y I G R
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR--- 447
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
D +A + F M+ G P + T + L
Sbjct: 448 -------------------------------DCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
LCK K + + V++ L + D+ +YN+M+ +C +G++ + + + + KG+ P
Sbjct: 477 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSP 536
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+V YN+++ CR+ A L +M G N TYN LI G+ E + L
Sbjct: 537 NVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELI 596
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
M G A DA+T L+ + + L +F
Sbjct: 597 KEMRSCGFAGDAST-IGLVTNMLHDGRLDKSF 627
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 188/421 (44%), Gaps = 11/421 (2%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-L 231
A+ + D+M RG + + +G + C+ + LS+L +K E I V+
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL---KKMEKGKIEADVVIYNT 263
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
II G CK K +++A + E+ + +PD Y + G + +L +
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSVSSIDP-RS 348
+ P + I + E ++ EA++L + ++ K +ID D+ ++LI D
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMI--KRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A F MI K P + T S L K CK + +E +E+++ +S + +Y ++
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
+ A V ++M G+ P++ YN L++ C+ L A +++ + S
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ TYNI+I + G++E LF N+ KGV+P+ Y +++ G C++ + + A +
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 529 NKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSDLGHSDSHVILLKS--LADA 586
K + +T + + R G + +L++ + S D+ I L + L D
Sbjct: 562 KKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 621
Query: 587 R 587
R
Sbjct: 622 R 622
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F M++ P++ + L + K NK + ++ + + + D+ +Y++ ++
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C +L A V+ +M + G +PD+ +SL+ C + A L DQM G
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ T+ LI + A+ L M+++G PD TY +++ GLC+ ++ A +
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 529 NKSVNHDVMLARSILSTFMISLCRRGHFLVATKLL 563
K + I +T + LC+ H A L
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 100/248 (40%), Gaps = 23/248 (9%)
Query: 360 GRVPTLSTLSNLSKNLCKRNK------------SDELVEVYKVLSANDYFTDMES----- 402
G PT+ + NL + C + L ++ KV A D F DM
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFP 81
Query: 403 ----YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+N ++S + + + ++M+ G+ D+ Y+ + CR L A +
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+M G ++ T + L++ + I A+ L M+E G PD T+T+L+ GL
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSDLGHSDSHVI 578
A + ++ V T + LC+RG +A LL+ + G ++ V+
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEK--GKIEADVV 259
Query: 579 LLKSLADA 586
+ ++ D
Sbjct: 260 IYNTIIDG 267
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/215 (18%), Positives = 90/215 (41%), Gaps = 15/215 (6%)
Query: 51 LVARVINPYLLTHHSLALGF------------FNWASQQPNFTHSPLSYHSILKSLSLSR 98
++++ P ++T+ +L GF F SQ+ + ++Y +++ +R
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYTTLIHGFFQAR 447
Query: 99 QINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN 158
+ V KQ+ + + Y ++ L + KA VF ++ + + N
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 507
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
++ + G +++ ++F +S +GV + I + I FC + S+L ++ K
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM-KE 566
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
+ + N LI G R E + +++ E+R
Sbjct: 567 DGPLPNSGTYNTLIRARLRDGDR-EASAELIKEMR 600
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 193/439 (43%), Gaps = 52/439 (11%)
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M RG F+ + + C N + G+ +S+L E+R+ NS++ +I GFC+G
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRR--NSLMPDVFSYNTVIRGFCEG 190
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
K +E+A ++ +E++ C + + I+ + F G + E LK+ + +G+ Y
Sbjct: 191 KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVY 250
Query: 300 REFILGLIVERRICEAKEL--GEVIVSGKFTIDDD----VLNALIGSVSSIDP-RSAIVF 352
I G C+ EL G+ + D N LI + + A
Sbjct: 251 TSLIRGF------CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F FMIE+G P + T + L LC K+ E +++ ++ D + +YN++++ LC
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
Query: 413 SGRLREAYGVIQEMKRK--------------GL-----------------------DPDV 435
G + +A +++ MK++ GL DPDV
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDV 424
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YN+L+ C+E+ L A ++D + +G+ T NIL++ + G++ A+ L+
Sbjct: 425 ISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ 484
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGH 555
+ + + ++ TYT++++G C+ L A + K ++ + + + SLC+ G
Sbjct: 485 ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGS 544
Query: 556 FLVATKLLRGLSSDLGHSD 574
A +L + D D
Sbjct: 545 LDQAWRLFEEMQRDNNFPD 563
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 123/557 (22%), Positives = 239/557 (42%), Gaps = 72/557 (12%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
F + +++ +LK L + + S+L++++ N + D Y +I +GK +KA
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKAL 197
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+ NE+K + L+ G +D A+ EM G+E + + I F
Sbjct: 198 ELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGF 257
Query: 200 CENAKLGQVLSMLDEVRKRE--------NSMING-----------SVIAVLI-------- 232
C+ +L + ++ DEV +R N++I G + +I
Sbjct: 258 CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNV 317
Query: 233 ------IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
I G C + +EA ++L+ + ++ +P+ + Y I+ + G V + +++
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVEL 377
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALI-GSVSS 343
+K P Y + GL + + EA +L +++ D DV+ NALI G
Sbjct: 378 MKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKE 437
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
A+ ++ ++EK T + L + K ++ +E++K +S + + ++Y
Sbjct: 438 NRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY 497
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ--- 460
M+ C +G L A G++ +M+ L P V YN L+ + C+E L A +L+++
Sbjct: 498 TAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQR 557
Query: 461 --------------------------------MFASGCSGNLKTYNILISKFSEVGEIEG 488
M +G S +L TY+ LI++F ++G ++
Sbjct: 558 DNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDE 617
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
A+ F M++ G PDA S+L+ + E+ K V+ D++L + + T M
Sbjct: 618 AISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMD 677
Query: 549 SLCR-RGHFLVATKLLR 564
+C + +A +LLR
Sbjct: 678 YMCNSSANMDLAKRLLR 694
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 137/300 (45%), Gaps = 20/300 (6%)
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
L G +++ A+ M +P + + + + + C+ + ++ +E+ + +
Sbjct: 149 LKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGC 208
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ ++ +++ C +G++ EA G ++EMK GL+ D+ Y SL+ C L K
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKA 268
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L+D++ G S TYN LI F ++G+++ A +F M+E+GV P+ TYT L++GLC
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSDLGHSD-- 574
+ A ++ N + D + + LC+ G A +++ + D
Sbjct: 329 GVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388
Query: 575 SHVILLKSLADAREVEMAIEHIKWIQESSPTMLQEISAELFASLSSSSYPEPILLLLHAL 634
++ ILL L + L E S L+ L SSY +P ++ +AL
Sbjct: 389 TYNILLGGLCAKGD------------------LDEASKLLYLMLKDSSYTDPDVISYNAL 430
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 106/229 (46%)
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
N + V S + A F+ M+E +LS L + + K+ V ++
Sbjct: 77 NLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKR 136
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ ++ ++N+++ LC + +A +++EM+R L PDV YN+++ C L A
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+L ++M SGCS +L T+ ILI F + G+++ A+ M G+ D YTSL+ G
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLL 563
C L +F++ + +T + C+ G A+++
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 195/438 (44%), Gaps = 7/438 (1%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALK 175
D Y +I + ++ KA+S ++E+ I P++ NS++A L +D A++
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLD--RGILPDVVTYNSIIAALCKAQAMDKAME 252
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ + M GV + + + +C + + + + L ++R + + V L++
Sbjct: 253 VLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRS--DGVEPDVVTYSLLMDY 310
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
CK R EA K+ D + R KP+ Y + + + G++ E +L + G+ P
Sbjct: 311 LCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPD 370
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFN 354
+ I + ++ +A + + + A+IG + S A+++F
Sbjct: 371 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 430
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
MI++G P ++L LC NK + E+ + + +N ++ C G
Sbjct: 431 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 490
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
R+ E+ + + M R G+ P+V YN+L+ C + A KL M + G N TY+
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 550
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
LI+ + ++ +E AL LF M GV+PD TY +L+GL Q AA E++ +
Sbjct: 551 TLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES 610
Query: 535 DVMLARSILSTFMISLCR 552
+ S + + LC+
Sbjct: 611 GTQIELSTYNIILHGLCK 628
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 183/433 (42%), Gaps = 8/433 (1%)
Query: 138 AFSVFNEV-KFNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
A S +N + + +++ P++C L+ G +D + +G I F
Sbjct: 68 AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTP 127
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-- 252
+ C + + + ++ R E I +++ G C R +EA ++L +
Sbjct: 128 LLKGLCADKRTSDAMDIVLR-RMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMAD 186
Query: 253 -RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
R PD ++Y V F G + + G+ P Y I L +
Sbjct: 187 DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQA 246
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
+ +A E+ +V D N+++ G SS P+ AI F M G P + T S
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSL 306
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L LCK + E +++ ++ ++ +Y ++ T G L E +G++ M R G
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+ PD ++ L+ A ++ + A ++ +M G + N TY +I + G +E A+
Sbjct: 367 IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
F M+++G++P Y SL+ GLC + A E+ + ++ + L ++ + S
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH 486
Query: 551 CRRGHFLVATKLL 563
C+ G + + KL
Sbjct: 487 CKEGRVIESEKLF 499
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/489 (21%), Positives = 207/489 (42%), Gaps = 21/489 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+SIL S Q LK+++ + + D Y ++ L + +A +F+
Sbjct: 267 MTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDS 326
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ + PEI +LL A+ G + + D M G+ F + I + +
Sbjct: 327 MTK--RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384
Query: 203 AKLGQVLSMLDEVRKR---ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
K+ Q + + ++R++ N++ G+VI +L CK RVE+A +++ P
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL-----CKSGRVEDAMLYFEQMIDEGLSP 439
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
I Y + E ++ + G+ T + I E R+ E+++L
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499
Query: 320 EVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
E++V + N LI G + A+ + M+ G P T S L CK
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKI 559
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
++ ++ + ++K + ++ D+ +YN+++ L + R A + + G ++S Y
Sbjct: 560 SRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTY 619
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLK----TYNILISKFSEVGEIEGALRLFH 494
N ++ C+ L A QMF + C +LK T+NI+I +VG + A LF
Sbjct: 620 NIILHGLCKNKLTDDAL----QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV 675
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRG 554
G+ P+ TY + E + + L+ ++F ++ + +L+ + L +RG
Sbjct: 676 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735
Query: 555 HFLVATKLL 563
A L
Sbjct: 736 EITRAGTYL 744
Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 130/284 (45%), Gaps = 10/284 (3%)
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI---VFFNFMIEKGRVPTLSTLSNLSKN 374
LG VI G F +D L+ + + D R++ + M E G +P + + + L K
Sbjct: 110 LGNVIKKG-FRVDAIAFTPLLKGLCA-DKRTSDAMDIVLRRMTELGCIPNVFSYNILLKG 167
Query: 375 LCKRNKSDELVEVYKVLS---ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
LC N+S E +E+ +++ D+ SY +++ G +AY EM +G+
Sbjct: 168 LCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGI 227
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
PDV YNS++ A C+ + A ++ + M +G + TYN ++ + G+ + A+
Sbjct: 228 LPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG 287
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
M GV PD TY+ L++ LC+ A ++F+ + + T +
Sbjct: 288 FLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYA 347
Query: 552 RRGHFLVATKLLRGLSSDLGHSDSHV--ILLKSLADAREVEMAI 593
+G + LL + + H D +V IL+ + A +V+ A+
Sbjct: 348 TKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAM 391
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 188/434 (43%), Gaps = 8/434 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++L+ + + + +L + N I D V+ +I + + +A VF+++
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ + +++ +L G +++A+ F++M G+ I + I C K
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR-ECKPDFIAY 264
+ ++ E+ R + ++ II CK RV E+ K+ EL +R KP+ I Y
Sbjct: 458 ERAEELILEMLDR--GICLNTIFFNSIIDSHCKEGRVIESEKLF-ELMVRIGVKPNVITY 514
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + L G + E +L +G+ P T Y I G R+ +A L + + S
Sbjct: 515 NTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMES 574
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ D N ++ G + +A + + E G LST + + LCK +D+
Sbjct: 575 SGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDD 634
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+++++ L D + ++N+M+ L GR EA + GL P+ Y + E
Sbjct: 635 ALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 694
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+ LL +L+ M +GC+ + N ++ + + GEI A + EK +
Sbjct: 695 NIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSL 754
Query: 504 DATT---YTSLLEG 514
+A+T + LL G
Sbjct: 755 EASTASLFIDLLSG 768
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 120/505 (23%), Positives = 223/505 (44%), Gaps = 45/505 (8%)
Query: 49 PSL-VARVINPYLLTHHSLAL------GFFNWASQQPNFTHSPLSYHSILKSLSLSRQIN 101
PSL V V++ L+ H+ L+L FF + S QP F + +Y + + L++
Sbjct: 78 PSLSVHHVVD--LINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLARFLAVHEMFT 135
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEI--- 156
S+++ V V++ +S+ FI SL++ + T + + + D+G P+
Sbjct: 136 EAQSLIELV-VSRKGKNSASSVFI--SLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQC 192
Query: 157 ---------------CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
C +LL + + E+ G + F + + KFC+
Sbjct: 193 FRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCK 252
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + DE+ KR + +V++ +I+G+CK ++E F++ ++ +PD
Sbjct: 253 EGNISDAQKVFDEITKRS---LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPD 309
Query: 261 FIAY----RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
Y + +E K+ G+ + + K G+ P + I G I K
Sbjct: 310 VFTYSALINALCKENKMDGA----HGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMK 365
Query: 317 ELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
E + ++S D + N L+ G + D +A + MI +G P T + L
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C+ + +E+ K + N D ++ +V +C GR+ +A ++EM R G+ PD
Sbjct: 426 CRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDD 485
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y +M+A C++ + KL +M + G ++ TYN+L++ ++G+++ A L
Sbjct: 486 VTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDA 545
Query: 496 MLEKGVAPDATTYTSLLEGLCQETN 520
ML GV PD TY +LLEG + N
Sbjct: 546 MLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 108/212 (50%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F+ + ++ PT+ + + L CK DE + + + D+ +Y+ +++ LC
Sbjct: 263 FDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCK 322
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
++ A+G+ EM ++GL P+ + +L+ R + K+ + +M + G ++
Sbjct: 323 ENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVL 382
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
YN L++ F + G++ A + M+ +G+ PD TYT+L++G C+ +++ A E+ +
Sbjct: 383 YNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMD 442
Query: 533 NHDVMLARSILSTFMISLCRRGHFLVATKLLR 564
+ + L R S + +C+ G + A + LR
Sbjct: 443 QNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 105/234 (44%), Gaps = 1/234 (0%)
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN-LCKRNKSDELVEVYKVLSAND 395
L+ + ++P I F I P + N+ N CK + +V+ ++
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ S+N +++ C G L E + + +M++ PDV Y++L+ A C+E+ + A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L+D+M G N + LI S GEI+ + ML KG+ PD Y +L+ G
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSD 569
C+ +L AA + + + + + +T + CR G A ++ + + +
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQN 444
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 110/240 (45%), Gaps = 8/240 (3%)
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
NL + K N + + Y + + ++ +N++++ C G + +A V E+ +
Sbjct: 209 GNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITK 268
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
+ L P V +N+L+ C+ L +L QM S ++ TY+ LI+ + +++G
Sbjct: 269 RSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDG 328
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
A LF M ++G+ P+ +T+L+ G + + E + K ++ + + +T +
Sbjct: 329 AHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
Query: 549 SLCRRGHFLVATKLL-----RGLSSDLGHSDSHVILLKSLADAREVEMAIEHIKWIQESS 603
C+ G + A ++ RGL D ++ L+ +VE A+E K + ++
Sbjct: 389 GFCKNGDLVAARNIVDGMIRRGLRPD---KITYTTLIDGFCRGGDVETALEIRKEMDQNG 445
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 185/412 (44%), Gaps = 7/412 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ +A + + + ++M G+ + +FI FC ++L L++L ++ K
Sbjct: 87 NKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK 146
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E ++ S +++G+C KR+ +A ++D++ KPD + + L
Sbjct: 147 LGYEPDIVTLSS----LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E ++ + + G P Y + GL I A L + + + + + N
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262
Query: 336 ALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I S+ A+ F M KG P + T ++L LC + + + +
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK 322
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ ++N ++ G+L EA + +EM ++ +DPD YN L+ C + L A
Sbjct: 323 KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA 382
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K+++ M + C N++TYN LI+ F + +E + LF M ++G+ + TYT++++G
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGL 566
Q + +A VF + V++ V S + LC G A + + L
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 153/358 (42%), Gaps = 5/358 (1%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
VL K KLG P + G +RI +A L + +V + D LI +
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 343 SIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ S A+ + M+++G P L T + LCKR D + + + A ++
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVV 259
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+N ++ LC + A + EM+ KG+ P+V YNSL+ C A +L M
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ N+ T+N LI F + G++ A +L M+++ + PD TY L+ G C L
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSD--LGHSDSHVIL 579
A ++F V+ D + +T + C+ +L R +S +G++ ++ +
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 580 LKSLADAREVEMAIEHIK-WIQESSPTMLQEISAELFASLSSSSYPEPILLLLHALQE 636
++ A + + A K + PT + S L L S + L++ LQ+
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI-LLHGLCSYGKLDTALVIFKYLQK 496
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 196/452 (43%), Gaps = 50/452 (11%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QP+ ++Y +++ L I+ ++L +++ +I + ++ II SL + ++ +
Sbjct: 220 QPDL----VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 137 KAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
A +F E++ + I P + NSL+ L + G +A ++ M + + + + F
Sbjct: 276 VAVDLFTEME--TKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
I F + KL + + +E+ +R S+ ++ L+I+GFC R++EA ++ +
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQR--SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS 391
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
++C P+ Y + F V + + ++ + G+ T Y I G
Sbjct: 392 KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF------- 444
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT-LSTLSNLSK 373
+ D SA + F M+ RVPT + T S L
Sbjct: 445 ---------------------------QAGDCDSAQMVFKQMVSN-RVPTDIMTYSILLH 476
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
LC K D + ++K L ++ ++ YN M+ +C +G++ EA+ + + K P
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---P 533
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
DV YN+++ C + LL+ A L+ +M G N TYN LI + + L
Sbjct: 534 DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELI 593
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
M G DA+T SL+ + + L +F
Sbjct: 594 KEMRSSGFVGDAST-ISLVTNMLHDGRLDKSF 624
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 203/448 (45%), Gaps = 14/448 (3%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++ S+L S++I+ +++ Q+ D+ + +I L +A ++ ++
Sbjct: 154 VTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQ 213
Query: 145 -VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
V+ C+ P++ +++ L G ID AL + ++M ++ + + F I C
Sbjct: 214 MVQRGCQ---PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC- 269
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
K V +D + E I +V+ +I+ C R +A ++L + ++ P+
Sbjct: 270 --KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN 327
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ + + + F G + E E + ++ + + P T Y I G + R+ EAK++ +
Sbjct: 328 VVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387
Query: 321 VIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+VS + N LI G + F M ++G V T + + + +
Sbjct: 388 FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
D V+K + +N TD+ +Y++++ LC+ G+L A + + +++ ++ ++ YN
Sbjct: 448 DCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYN 507
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+++E C+ + A WD + ++ TYN +IS ++ A LF M E
Sbjct: 508 TMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKED 564
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEV 527
G P++ TY +L+ ++ + A+ E+
Sbjct: 565 GTLPNSGTYNTLIRANLRDCDRAASAEL 592
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F M++ P++ + L + K NK + ++ + + + D+ +Y++ ++
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C +L A V+ +M + G +PD+ +SL+ C + A L DQM G
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ T+ LI + A+ L M+++G PD TY +++ GLC+ ++ A +
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 529 NKSVNHDVMLARSILSTFMISLCRRGHFLVATKLL 563
NK + I +T + SLC+ H VA L
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 107/260 (41%), Gaps = 27/260 (10%)
Query: 360 GRVPTLSTLSNLSKNLCKRNK------------SDELVEVYKVLSANDYFTDMES----- 402
G PT+ + NL + C + L ++ KV A D F DM
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFP 81
Query: 403 ----YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+N ++S + + + ++M+ G+ D+ Y+ + CR L A +
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+M G ++ T + L++ + I A+ L M+E G PD T+T+L+ GL
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSDLGHSDSHVI 578
A + ++ V T + LC+RG +A LL + + ++V+
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEA--ARIKANVV 259
Query: 579 LLKSLADA----REVEMAIE 594
+ ++ D+ R VE+A++
Sbjct: 260 IFNTIIDSLCKYRHVEVAVD 279
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/469 (21%), Positives = 216/469 (46%), Gaps = 37/469 (7%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
L L +++W + + + S +L SL+ +++ + I S L
Sbjct: 83 LCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLD----------------- 125
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNA-----LKMFDEM 180
++ + + S+F+ + C+++ NS++A + Y +N+ + F
Sbjct: 126 --GFVRNGSDHQVHSIFHAISM-CDNV---CVNSIIADMLVLAYANNSRFELGFEAFKRS 179
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKG 239
+ G + S + + + + V + E+ +R+ I +V ++I+ CK
Sbjct: 180 GYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRK---IQPNVFTFNVVINALCKT 236
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS---VFEREVVLKKKRKLGVAPRT 296
++ +A V++++++ C P+ ++Y + + + +G +++ + VLK+ + V+P
Sbjct: 237 GKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNL 296
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNF 355
+ I G + + + ++ + ++ + N+LI + + S AI +
Sbjct: 297 TTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDK 356
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M+ G P L T + L CK + E ++++ + YN+++ C G+
Sbjct: 357 MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK 416
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ + + + +EM+R+G+ PDV YN L+ CR + AKKL+DQ+ + G +L T++I
Sbjct: 417 IDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHI 475
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
L+ + GE A L M + G+ P TY +++G C+E NL+AA
Sbjct: 476 LMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 193/434 (44%), Gaps = 31/434 (7%)
Query: 151 DIGPEICNSLLAVLASDGYIDNALKMFDEMSH---RGVEFSTIGFGVFIWKFCENAKLGQ 207
++ P++C + L + I +L++ ++ H +S I F+ F N Q
Sbjct: 78 ELDPDLCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIR--SFLDGFVRNGSDHQ 135
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD-------ELRIRECKPD 260
V S+ + +N +N S+IA +++ + R E F+ +L CKP
Sbjct: 136 VHSIFHAISMCDNVCVN-SIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPL 194
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
IA ++ E + E V K+ + + P + I L ++ +A+++ E
Sbjct: 195 MIA--LLKEN-----RSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVME 247
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRS----AIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+ + + N LI + A M+E P L+T + L
Sbjct: 248 DMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFW 307
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K + ++V+K + D ++ SYN +++ LC G++ EA + +M G+ P++
Sbjct: 308 KDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLI 367
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YN+L+ C+ D+L+ A ++ + G + YN+LI + ++G+I+ L M
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI---SLCRR 553
+G+ PD TY L+ GLC+ N++AA ++F++ + + L TF I CR+
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL----PDLVTFHILMEGYCRK 483
Query: 554 GHFLVATKLLRGLS 567
G A LL+ +S
Sbjct: 484 GESRKAAMLLKEMS 497
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 182/428 (42%), Gaps = 62/428 (14%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQ-GKNT 135
QPN +++ ++ +L + ++N V++ +KV + + Y +I + G N
Sbjct: 220 QPNV----FTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNG 275
Query: 136 Q--KAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
+ KA +V E+ N D+ P + N L+ D + ++K+F EM + V+ + I
Sbjct: 276 KMYKADAVLKEMVEN--DVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI-----IHGFCKGKRVEEAF 246
+ I C K+ + +SM D+ M++ V LI I+GFCK ++EA
Sbjct: 334 YNSLINGLCNGGKISEAISMRDK-------MVSAGVQPNLITYNALINGFCKNDMLKEAL 386
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
+ ++ + P Y ++ + + +G + + + ++ + G+ P Y I GL
Sbjct: 387 DMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
I AK+L F+ + KG +P L
Sbjct: 447 CRNGNIEAAKKL----------------------------------FDQLTSKG-LPDLV 471
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T L + C++ +S + + K +S +YN+++ C G L+ A + +M
Sbjct: 472 TFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM 531
Query: 427 -KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG- 484
K + L +V+ YN L++ ++ L A L ++M G N TY I+ + + G
Sbjct: 532 EKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGF 591
Query: 485 --EIEGAL 490
+IEG L
Sbjct: 592 VPDIEGHL 599
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 203/484 (41%), Gaps = 48/484 (9%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S ++Y I+ S + A D + K TL++S+Y II + Q N ++A ++
Sbjct: 378 SLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALV 437
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYI-----DNALKMFDEMSHRGVEFSTIGFGVFIW 197
E++ D I ++++ DGY L +F + G + + +G I
Sbjct: 438 REMEEEGIDAPIAIYHTMM-----DGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLIN 492
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
+ + K+ + L + V K E N + ++I+GF K K AF V +++
Sbjct: 493 LYTKVGKISKALE-VSRVMKEEGVKHNLKTYS-MMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL--------------------------- 290
KPD I Y + F MG++ +K+ +KL
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610
Query: 291 --------GVAPRTNDYREFILGLIVERRICEAKE-LGEVIVSGKFTIDDDVLNALIGSV 341
G P + + I GL+ +R++ +A E L E+ ++G + + G
Sbjct: 611 VFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYA 670
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
S D A +F + +G + T L K CK + + V K +SA + +
Sbjct: 671 SVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 730
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
YN+++ G + EA +IQ+MK++G+ PD+ Y S + AC + + A + ++M
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM 790
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
A G N+KTY LI ++ E AL + M G+ PD Y LL L ++
Sbjct: 791 EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASI 850
Query: 522 QAAF 525
A+
Sbjct: 851 AEAY 854
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 172/423 (40%), Gaps = 3/423 (0%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
I SL+ A +D AL +M G+E S + + V + F + DE
Sbjct: 346 IYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEA 405
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
KR + +N S+ II+ C+ +E A ++ E+ Y + + + ++
Sbjct: 406 -KRIHKTLNASIYGK-IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVA 463
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ VV K+ ++ G P Y I +I +A E+ V+ + +
Sbjct: 464 DEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYS 523
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I G V D +A F M+++G P + +N+ C D ++ K +
Sbjct: 524 MMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL 583
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ ++ ++ SG +R + V M+R G P V +N L+ + + A
Sbjct: 584 RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKA 643
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++ D+M +G S N TY ++ ++ VG+ A F + +G+ D TY +LL+
Sbjct: 644 VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKA 703
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSDLGHSD 574
C+ +Q+A V + ++ + + + RRG A L++ + + D
Sbjct: 704 CCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPD 763
Query: 575 SHV 577
H
Sbjct: 764 IHT 766
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/317 (18%), Positives = 123/317 (38%), Gaps = 14/317 (4%)
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
H KS + R + D + + V + + +I L++ + +KA + +E+
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTV----HTFNGLINGLVEKRQMEKAVEILDEMTL 652
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
++ AS G A + F + + G++ + + C++ ++
Sbjct: 653 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS 712
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
L++ E+ R ++ S + ++I G+ + V EA ++ +++ KPD Y
Sbjct: 713 ALAVTKEMSAR--NIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSF 770
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL----IVERRICEAKELGEVIV 323
G + +++ LGV P Y I G + E+ + +E+ + +
Sbjct: 771 ISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 830
Query: 324 SGKFTIDDDVLNALIGSVSSIDP---RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ +L +L+ S + + M+E G + + T + SK LCK
Sbjct: 831 KPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEA 890
Query: 381 S-DELVEVYKVLSANDY 396
S EL E + D+
Sbjct: 891 SGGELTETLQKTFPPDW 907
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 68/175 (38%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F M +G PT ++L DE + + + + +Y+V+V
Sbjct: 332 FERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSK 391
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
+G A E KR + S Y ++ A C+ + A+ L +M G +
Sbjct: 392 AGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAI 451
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
Y+ ++ ++ V + + L +F + E G P TY L+ + + A EV
Sbjct: 452 YHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV 506
Score = 38.5 bits (88), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V FY R D+ R A++ +++M A G + + Y LI ++ +++ AL
Sbjct: 316 VKFYGR------RGDMHR-ARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVR 368
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRG 554
M E+G+ TY+ ++ G + + +AA F+++ L SI + + C+
Sbjct: 369 KMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTC 428
Query: 555 HFLVATKLLRGLSSD 569
+ A L+R + +
Sbjct: 429 NMERAEALVREMEEE 443
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 127/555 (22%), Positives = 228/555 (41%), Gaps = 43/555 (7%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDS 105
+L+P V RV+ L LA FF W+ + F HS SY + L +R +S
Sbjct: 105 TLAPIWVPRVLVE-LKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANS 163
Query: 106 VLKQVKVNKITLDS---------------SVYRFIIPSLIQGKNTQKAFSVFNEVK-FNC 149
VLK++ ++K D V+ + LI ++A F+++K F
Sbjct: 164 VLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFR- 222
Query: 150 EDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
+ P+ CN LL A G D+ + F +M G + + + I C+ +
Sbjct: 223 --VFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEA 280
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
+ +E++ R ++ +V +I GF K R+++ +E++ C+PD I Y +
Sbjct: 281 ARGLFEEMKFR--GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNAL 338
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-------KELGE 320
F G + ++ + G+ P Y + E + +A + +G
Sbjct: 339 INCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
V +T D N IG++S A N M++ G + T + L LC +
Sbjct: 399 VPNEYTYTSLIDA-NCKIGNLSD-----AFRLGNEMLQVGVEWNVVTYTALIDGLCDAER 452
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
E E++ + ++ SYN ++ + + A ++ E+K +G+ PD+ Y +
Sbjct: 453 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGT 512
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+ C + + AK + ++M G N Y L+ + + G L L M E
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI-SLCRRGHFLVA 559
+ T+ L++GLC+ + A + FN+ N + A + + T MI LC+ A
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 632
Query: 560 TKLL-----RGLSSD 569
T L +GL D
Sbjct: 633 TTLFEQMVQKGLVPD 647
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/468 (19%), Positives = 185/468 (39%), Gaps = 43/468 (9%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y+ ++ + + A + +++K + D+ Y +I + F E
Sbjct: 263 FTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEE 322
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+K C + N+L+ G + L+ + EM G++ + + + + FC+
Sbjct: 323 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382
Query: 205 LGQVLSMLDEVRK--------RENSMINGS-------------------------VIAVL 231
+ Q + ++R+ S+I+ + V
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I G C +R++EA ++ ++ P+ +Y + F ++ +L + + G
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 292 VAPRTNDYREFILGLIVERRICEAK----ELGEVIVSGKFTIDDDVLNALIGSVSSIDPR 347
+ P Y FI GL +I AK E+ E + I +++A S +P
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF---KSGNPT 559
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES--YNV 405
+ + M E T+ T L LCK + V+ + +S ND+ + +
Sbjct: 560 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS-NDFGLQANAAIFTA 618
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
M+ LC ++ A + ++M +KGL PD + Y SLM+ ++ + A L D+M G
Sbjct: 619 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 678
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
+L Y L+ S +++ A M+ +G+ PD S+L+
Sbjct: 679 MKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLK 726
>sp|Q9ZUU3|PP190_ARATH Pentatricopeptide repeat-containing protein At2g37230
OS=Arabidopsis thaliana GN=At2g37230 PE=2 SV=1
Length = 757
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 142/637 (22%), Positives = 277/637 (43%), Gaps = 54/637 (8%)
Query: 28 RKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSY 87
R WT L+ ++ L SLV V++ H AL FF W + H ++
Sbjct: 98 RAWTTRLQNSIRDL--VPEWDHSLVYNVLHGAKKLEH--ALQFFRWTERSGLIRHDRDTH 153
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
++K L ++N +L + + D ++ +I S + Q++ +F ++K
Sbjct: 154 MKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMK- 212
Query: 148 NCEDIGPEIC----NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
D+G E NSL V+ G A + F++M GVE + + + +W F +
Sbjct: 213 ---DLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSL 269
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+L L ++++ R S + + +I+GFC+ K+++EA K+ E++ + P ++
Sbjct: 270 RLETALRFFEDMKTRGISPDDATFNT--MINGFCRFKKMDEAEKLFVEMKGNKIGPSVVS 327
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + + + + V + + ++ R G+ P Y + GL ++ EAK + + ++
Sbjct: 328 YTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMM 387
Query: 324 SGKFTIDDD--VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR--- 378
+ D+ L L+ + D +A M L +N CK
Sbjct: 388 AKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAY 447
Query: 379 NKS----DELVEVYKVLSANDYFTDME--SYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
N++ D L+E +L D +ME +YN ++ +LC +G+ +A + +++ ++G+
Sbjct: 448 NRAIKLLDTLIEKEIILRHQDTL-EMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ 506
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
D N+L+ +E + ++ M G Y +LI + GE A
Sbjct: 507 -DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTA 565
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS--ILSTFMISL 550
+M+E G PD++ + S++E L ++ +Q A V ++ +V + + +++ + +L
Sbjct: 566 LDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEAL 625
Query: 551 CRRGHFLVATKLLRGLSSDLGHSDSHVILLKSLADAREVEMAIEHIKWIQESSPTMLQEI 610
RGH A + L+ + GH+ LL L++ + A++ L +
Sbjct: 626 LMRGHVEEALGRIDLLNQN-GHTADLDSLLSVLSEKGKTIAALK------------LLDF 672
Query: 611 SAELFASLSSSSYPEPILLLLHALQEKCLDSEIGAGK 647
E SL SSY +K LD+ +GAGK
Sbjct: 673 GLERDLSLEFSSY------------DKVLDALLGAGK 697
Score = 37.0 bits (84), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 71/417 (17%), Positives = 166/417 (39%), Gaps = 61/417 (14%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S +SY +++K +++ + ++++ + I +++ Y ++P L +A ++
Sbjct: 324 SVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNIL 383
Query: 143 NEVKFNCEDIGPEICNSLLAVLASD---GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+ + I P+ + L +L S G + A ++ M+ V +GV I
Sbjct: 384 KNMM--AKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQ 441
Query: 200 CENAKLGQVLSMLDEVRKRE----------------NSMI-----NGSVIAVLI------ 232
C+ + + + +LD + ++E N +I NG +
Sbjct: 442 CKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLM 501
Query: 233 -------------IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
I G K + ++++L + R + AY ++ + + G +
Sbjct: 502 KRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGD 561
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD------V 333
+ L + G P ++ +R I L + R+ A + +++ I+D+ +
Sbjct: 562 AKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKI 621
Query: 334 LNALI--GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
L AL+ G V A+ + + + G L +L ++ L ++ K+ +++
Sbjct: 622 LEALLMRGHVEE-----ALGRIDLLNQNGHTADLDSLLSV---LSEKGKTIAALKLLDFG 673
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
D + SY+ ++ L +G+ AY V+ ++ KG D + L+++ +E
Sbjct: 674 LERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQE 730
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 194/408 (47%), Gaps = 12/408 (2%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D+A+ +F EM S + F F F A+ Q +LD ++ E + I ++ +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRF---FSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126
Query: 231 -LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
++I+ FC+ + A+ VL ++ +PD + + + L G V E V++ + +
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDP 346
G P Y + G+ A +L + D + +I S+ ID
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID- 245
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+AI F M KG ++ T ++L + LCK K ++ + K + + + ++ ++NV+
Sbjct: 246 -AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ G+L+EA + +EM +G+ P++ YN+LM+ C ++ L A + D M + C
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
S ++ T+ LI + V ++ +++F N+ ++G+ +A TY+ L++G CQ ++ A E
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 527 VFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSS---DLG 571
+F + V+H V+ + LC G A ++ L DLG
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 110/496 (22%), Positives = 213/496 (42%), Gaps = 55/496 (11%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSL-IQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLL 161
SVL +V D++ + +I L ++GK ++ V V+ C+ P++ NS++
Sbjct: 144 SVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ---PDVVTYNSIV 200
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
+ G AL + +M R V+ + I C + + +S+ E+ E
Sbjct: 201 NGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM---ETK 257
Query: 222 MINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
I SV+ ++ G CK + + +L ++ RE P+ I + ++ + F G + E
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+ K+ G++P Y + G ++ R+ EA + +++V K +
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS------------ 365
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
P + T ++L K C + D+ ++V++ +S +
Sbjct: 366 ----------------------PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA 403
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+Y+++V C SG+++ A + QEM G+ PDV Y L++ C L A ++++
Sbjct: 404 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 463
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
+ S + Y +I + G++E A LF ++ KGV P+ TYT ++ GLC++ +
Sbjct: 464 LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 523
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSDLGHSDSHVILL 580
L A + K +T + + R G + KL+ + S G S
Sbjct: 524 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS-CGFS------- 575
Query: 581 KSLADAREVEMAIEHI 596
ADA ++M I+ +
Sbjct: 576 ---ADASSIKMVIDML 588
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/440 (19%), Positives = 195/440 (44%), Gaps = 7/440 (1%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+P+ T ++++++K L L +++ ++ ++ N D Y I+ + + +T
Sbjct: 155 EPDTT----TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
A + +++ ++++ L DG ID A+ +F EM +G++ S + + +
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C+ K +L ++ RE ++ + +++ F K +++EA ++ E+ R
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSRE--IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
P+ I Y + + + + + E +L + +P + I G + +R+ +
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 317 ELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
++ I + + L+ G S + A F M+ G +P + T L L
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C K ++ +E+++ L + + Y ++ +C G++ +A+ + + KG+ P+V
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y ++ C++ L A L +M G + N TYN LI G++ + +L
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Query: 496 MLEKGVAPDATTYTSLLEGL 515
M G + DA++ +++ L
Sbjct: 569 MKSCGFSADASSIKMVIDML 588
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 110/228 (48%)
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ I AI F MI +P+L S + + + + +++ K L N ++
Sbjct: 64 IVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNI 123
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+ N+M++ C + AY V+ ++ + G +PD + +N+L++ E + A L D+
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR 183
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M +GC ++ TYN +++ G+ AL L M E+ V D TY+++++ LC++
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSS 568
+ AA +F + + + ++ + LC+ G + LL+ + S
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 131/295 (44%), Gaps = 13/295 (4%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWAS-QQPNFTH--------SP--LSYHSILKSLS 95
L +V+R I P ++T + L F Q+ N + SP ++Y++++
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
+ +++ +++L + NK + D + +I K VF +
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+ L+ G I A ++F EM GV + +G+ + C+N KL + L + +++
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+K + + G V+ II G CKG +VE+A+ + L + KP+ + Y ++ G
Sbjct: 465 QKSKMDL--GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
S+ E ++L+K + G AP Y I + + + + +L E + S F+ D
Sbjct: 523 SLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 124/526 (23%), Positives = 233/526 (44%), Gaps = 47/526 (8%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSS-VYRFIIPSLIQGKNT 135
+P+ L+ + K+L L+ +S+L+++K K+ + S Y +I + ++ N
Sbjct: 265 EPDSLLYSLAVQACCKTLDLA----MANSLLREMKEKKLCVPSQETYTSVILASVKQGNM 320
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
A + +E+ + + SL+ + + +AL +FD+M G +++ F V
Sbjct: 321 DDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVL 380
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRI 254
I F +N G++ L+ +K E + SV V II G+ KG++ EEA K+ DE
Sbjct: 381 IEWFRKN---GEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFE 437
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL-------- 306
F+ I++ K G E +L K G+ P Y +LG
Sbjct: 438 TGLANVFVCNTILSWLCK-QGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDL 496
Query: 307 -------IVERRICEAKELGEVIVSGKFTIDDD-----VLNALIGSVSSIDPRSAIVFFN 354
I+E+ + +++ G F D+ V+N + S ++ N
Sbjct: 497 ARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIIN 556
Query: 355 FMIEKGRVPTL-STLSNL--SKNLC--------------KRNKSDELVEVYKVLSANDYF 397
+ + G+ L+N+ K LC K + D V Y+ + N
Sbjct: 557 GLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGIS 616
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
++ +Y +++ LC + R+ +A + EMK KG+ D+ Y +L++ C+ + A L
Sbjct: 617 PNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASAL 676
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ ++ G + + YN LIS F +G + AL L+ ML+ G+ D TYT+L++GL +
Sbjct: 677 FSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLK 736
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLL 563
+ NL A E++ + ++ I + + L ++G F+ K+
Sbjct: 737 DGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMF 782
Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 194/450 (43%), Gaps = 42/450 (9%)
Query: 111 KVNKITLDSSVYRF--IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDG 168
K+ + L SV+ II ++G+ ++A +F+E F +CN++L+ L G
Sbjct: 399 KMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE-SFETGLANVFVCNTILSWLCKQG 457
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC--ENAKLGQVL--SMLDEVRKRENS--- 221
D A ++ +M RG+ + + + + C +N L +++ ++L++ K N
Sbjct: 458 KTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYS 517
Query: 222 -MING-------------------------SVIAVLIIHGFCKGKRVEEAFKVLDEL--R 253
+I+G V+ II+G CK + +A ++L +
Sbjct: 518 ILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEE 577
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
R C ++Y + + F G + ++ G++P Y + GL R+
Sbjct: 578 KRLCV-SCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMD 636
Query: 314 EAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
+A E+ + + + +D ALI G + SA F+ ++E+G P+ ++L
Sbjct: 637 QALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLI 696
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
+++YK + + D+ +Y ++ L G L A + EM+ GL
Sbjct: 697 SGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLV 756
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
PD Y ++ ++ K++++M + + N+ YN +I+ G ++ A RL
Sbjct: 757 PDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRL 816
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
ML+KG+ PD T+ L+ G Q NLQ
Sbjct: 817 HDEMLDKGILPDGATFDILVSG--QVGNLQ 844
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 129/287 (44%), Gaps = 32/287 (11%)
Query: 299 YREFILGLIVERR-ICEAKELGEVIVSGKFTID-DDVLNALI--GSVSSIDPRSAIVFFN 354
Y L +V+R + EAKEL +V+ +D D+V L+ S+ P A+ +
Sbjct: 200 YVNRTLSALVQRNSLTEAKELYSRMVA--IGVDGDNVTTQLLMRASLREEKPAEALEVLS 257
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM----------ESYN 404
IE+G P S L +L+ C + + AN +M E+Y
Sbjct: 258 RAIERGAEPD-SLLYSLAVQAC--------CKTLDLAMANSLLREMKEKKLCVPSQETYT 308
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
++ G + +A + EM G+ +V SL+ C+ + L A L+D+M
Sbjct: 309 SVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKE 368
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G S N T+++LI F + GE+E AL + M G+ P ++++G + + A
Sbjct: 369 GPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEA 428
Query: 525 FEVFNKSVN---HDVMLARSILSTFMISLCRRGHFLVATKLLRGLSS 568
++F++S +V + +ILS LC++G AT+LL + S
Sbjct: 429 LKLFDESFETGLANVFVCNTILSW----LCKQGKTDEATELLSKMES 471
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 11/228 (4%)
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS--AIVFFNFMIEKGRVP 363
++V + + AK G F ++ N L+ + S D ++ A+ N M+E +P
Sbjct: 145 VLVSKLVDSAKSFG-------FEVNSRAFNYLLNAYSK-DRQTDHAVDIVNQMLELDVIP 196
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
++ L +RN E E+Y + A D + +++ + EA V+
Sbjct: 197 FFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVL 256
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG-CSGNLKTYNILISKFSE 482
+G +PD Y+ ++ACC+ L A L +M C + +TY +I +
Sbjct: 257 SRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVK 316
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
G ++ A+RL ML G++ + TSL+ G C+ +L +A +F+K
Sbjct: 317 QGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDK 364
Score = 40.4 bits (93), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/183 (18%), Positives = 81/183 (44%), Gaps = 2/183 (1%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y S++ L + +++ + ++K + LD Y +I + N + A ++F+E
Sbjct: 620 ITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSE 679
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + I NSL++ + G + AL ++ +M G+ + I ++
Sbjct: 680 LLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGN 739
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + E++ ++ +I +I++G K + + K+ +E++ P+ + Y
Sbjct: 740 LILASELYTEMQAV--GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIY 797
Query: 265 RIV 267
V
Sbjct: 798 NAV 800
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 23/168 (13%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKS---LSLSRQINA 102
+L L+ +NP ++SL GF N N + Y +LK L
Sbjct: 675 ALFSELLEEGLNPSQPIYNSLISGFRNLG----NMVAALDLYKKMLKDGLRCDLGTYTTL 730
Query: 103 IDSVLK------------QVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCE 150
ID +LK +++ + D +Y I+ L + K +F E+K N
Sbjct: 731 IDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKN-- 788
Query: 151 DIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
++ P I N+++A +G +D A ++ DEM +G+ F + +
Sbjct: 789 NVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 119/506 (23%), Positives = 216/506 (42%), Gaps = 66/506 (13%)
Query: 42 GLRDSLSPSLVARVI----NPYLLTHHSLALGFF--NWASQ-------------QPNFTH 82
G R S + SLV +++ P T ++L G F N AS+ QP+
Sbjct: 164 GNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDL-- 221
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
++Y ++ L I+ S+LK+++ KI +Y II +L KN A ++F
Sbjct: 222 --VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E+ + + I P + NSL+ L + G +A ++ +M R + + + F I F
Sbjct: 280 TEM--DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVL-IIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ KL + + DE+ KR I+ + +I+GFC R++EA + + + ++C P
Sbjct: 338 KEGKLVEAEKLYDEMIKRS---IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
+ + Y + + F V E + ++ + G+ T Y I G + R C+
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF-QARECD----- 448
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+A + F M+ G +P + T S L LC
Sbjct: 449 ----------------------------NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K + + V++ L + D+ +YN+M+ +C +G++ + + + + KG+ P+V Y
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
++M CR+ L A L+ +M G + TYN LI G+ + L M
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 600
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAF 525
DA+T L+ + + L +F
Sbjct: 601 RFVGDAST-IGLVTNMLHDGRLDKSF 625
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 184/415 (44%), Gaps = 9/415 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L A+ + D M +G + + +G+ + C+ + LS+L +K
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL---KK 246
Query: 218 RENSMIN-GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E I G VI II C K V +A + E+ + +P+ + Y + G
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL-- 334
+ +L + + P + I + E ++ EA++L + ++ K +ID D+
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI--KRSIDPDIFTY 364
Query: 335 NALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
++LI D A F MI K P + T + L K CK + DE +E+++ +S
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ +Y ++ + A V ++M G+ PD+ Y+ L++ C +
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A +++ + S ++ TYNI+I + G++E LF ++ KGV P+ TYT+++
Sbjct: 485 ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 544
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSS 568
G C++ + A +F + + +T + + R G + +L+R + S
Sbjct: 545 GFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 157/366 (42%), Gaps = 7/366 (1%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
VL K KLG P + G RI +A L +V + D N LI +
Sbjct: 138 VLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF 197
Query: 343 SIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ S A+ + M+ KG P L T + LCKR D + + K + +
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
YN ++ LC + +A + EM KG+ P+V YNSL+ C A +L M
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ N+ T++ LI F + G++ A +L+ M+++ + PD TY+SL+ G C L
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSSD--LGHSDSHVIL 579
A +F ++ D +T + C+ +L R +S +G++ ++ L
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 580 LKSLADAREVEMAIEHIKWIQESSPTMLQEISAE--LFASLSSSSYPEPILLLLHALQEK 637
+ ARE + A I + Q S +L +I L L ++ E L++ LQ
Sbjct: 438 IHGFFQARECDNA--QIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 638 CLDSEI 643
++ +I
Sbjct: 496 KMEPDI 501
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 96/214 (44%)
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
I ++ + A+ F M++ P++ S L + K NK D ++ + + +
Sbjct: 54 INRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 113
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
++ +Y+++++ C +L A V+ +M + G +PD+ NSL+ C + + A L
Sbjct: 114 HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSL 173
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
QM G + T+N LI A+ L M+ KG PD TY ++ GLC+
Sbjct: 174 VGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK 233
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
++ A + K + I +T + +LC
Sbjct: 234 RGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 24/220 (10%)
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
NL ++ K +VE K+LSA M +++++S + ++M+
Sbjct: 67 NLFGDMVKSRPFPSIVEFSKLLSA---IAKMNKFDLVIS-------------LGEQMQNL 110
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
G+ ++ Y+ L+ CR L A + +M G ++ T N L++ F I A
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI- 548
+ L M+E G PD+ T+ +L+ GL + A + ++ V V + L T+ I
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMV---VKGCQPDLVTYGIV 227
Query: 549 --SLCRRGHFLVATKLLRGLSSDLGHSDSHVILLKSLADA 586
LC+RG +A LL+ + G + V++ ++ DA
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEQ--GKIEPGVVIYNTIIDA 265
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 179/413 (43%), Gaps = 6/413 (1%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL V+A D + + D + GV + + FC++++ S L ++ K
Sbjct: 78 LLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKL- 136
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
V +I+GFC G R+EEA +++++ KPD + Y + + G V
Sbjct: 137 -GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNY 195
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+ + G+ P Y + GL R +A L + K D NALI
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 340 S-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
+ V A +N MI P + T ++L C DE +++ ++ F
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D+ +Y +++ C ++ +A + EM +KGL + Y +L++ + A++++
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK---GVAPDATTYTSLLEGL 515
M + G N++TYN+L+ G+++ AL +F +M ++ GVAP+ TY LL GL
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGL 435
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLRGLSS 568
C L+ A VF ++ + + + +C+ G A L L S
Sbjct: 436 CYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPS 488
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 174/366 (47%), Gaps = 8/366 (2%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
++ A+ M ++M G++ + + I C+N + LS+ D++ EN I V+
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM---ENYGIRPDVVM 214
Query: 230 VL-IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+++G C R +A +L + R+ KPD I + + + F G + E + +
Sbjct: 215 YTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPR 347
++ +AP Y I G +E + EA+++ ++ + D +LI G
Sbjct: 275 RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVD 334
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A+ F M +KG T + L + + K + EV+ + + ++ +YNV++
Sbjct: 335 DAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLD---PDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
LC +G++++A + ++M+++ +D P++ YN L+ C L A +++ M
Sbjct: 395 HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
+ TY I+I + G+++ A+ LF ++ KGV P+ TYT+++ GL +E A
Sbjct: 455 EMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEA 514
Query: 525 FEVFNK 530
+F K
Sbjct: 515 HVLFRK 520
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 8/230 (3%)
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
L + S+ A+ F M+E +P++ + L + K K D ++ + L
Sbjct: 44 LRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGV 103
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ + N++++ C S + A + +M + G +PD+ + SL+ C + + A
Sbjct: 104 SHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMS 163
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ +QM G ++ Y +I + G + AL LF M G+ PD YTSL+ GLC
Sbjct: 164 MVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLC 223
Query: 517 QETNLQAAFEVF----NKSVNHDVMLARSILSTFMISLCRRGHFLVATKL 562
+ A + + + DV+ +++ F+ + G FL A +L
Sbjct: 224 NSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV----KEGKFLDAEEL 269
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 62/149 (41%)
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ EA + M P + + L+ + L D + G S +L T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
+L++ F + + A M++ G PD T+TSL+ G C ++ A + N+ V
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 535 DVMLARSILSTFMISLCRRGHFLVATKLL 563
+ + +T + SLC+ GH A L
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 213/452 (47%), Gaps = 23/452 (5%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK-- 217
+L V+A D + ++ +M + G+ F + I FC ++L L++L ++ K
Sbjct: 85 VLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLG 144
Query: 218 -RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF---KL 273
R + + GS +++GFC+G R +EA ++D + P+ + Y V +
Sbjct: 145 FRPSIVTLGS-----LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
+ + E ++KK G+ Y I GL R +A L +V K ID +V
Sbjct: 200 LNNALEVFYCMEKK---GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK--IDPNV 254
Query: 334 L--NALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
+ ALI + V + A + MI + VP + T ++L C + ++ +
Sbjct: 255 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 314
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ + F D+ +YN +++ C S R+ + + EM +GL D YN+L+ C+
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
L A+K++++M G S ++ TYNIL+ G+IE AL + ++ + + D TY
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS-LCRRGHFLVATKLLRGLSSD 569
+++GLC+ L+ A+ +F +S+ + +I MIS LCR+G A KL R + D
Sbjct: 435 IIQGLCRTDKLKEAWCLF-RSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493
Query: 570 LGHSDSHVILLKSLADAREVEMAIEHIKWIQE 601
G S I ++L D ++ E IK E
Sbjct: 494 -GFMPSERIYDETLRD-HYTSLSAELIKAAHE 523
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 151/343 (44%), Gaps = 5/343 (1%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
++ QG Q+A S+ + + I N+++ L + ++NAL++F M +G
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVI-AVLIIHGFCKGKRVE 243
+ + + I + + +L ++ KR+ I+ +VI +I F K +
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK---IDPNVIFFTALIDTFVKEGNLL 271
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
EA + E+ R P+ Y + F + G + + + + G P Y I
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRV 362
G +R+ + +L + D N LI G + A FN M++ G
Sbjct: 332 TGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 391
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + T + L LC K ++ + + + L ++ D+ +YN+++ LC + +L+EA+ +
Sbjct: 392 PDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCL 451
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+ + RKG+ PD Y +++ CR+ L R A KL +M G
Sbjct: 452 FRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 103/220 (46%), Gaps = 8/220 (3%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A F M++ +P++ + + + K NK D ++ +Y + D+ S+ +++
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C RL A ++ +M + G P + SL+ C+ + + A L D M G
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF--- 525
N+ YN +I+ + ++ AL +F+ M +KG+ DA TY +L+ GL A
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 526 -EVFNKSVNHDVMLARSILSTFMISLCRRGHFLVATKLLR 564
++ + ++ +V+ +++ TF+ + G+ L A L +
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFV----KEGNLLEARNLYK 278
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 2/184 (1%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMF 177
D Y +I + K + +F E+ + N+L+ G ++ A K+F
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFC 237
+ M GV + + + + C N K+ + L M+++++K E M + +II G C
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE--MDVDIITYNIIIQGLC 440
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
+ +++EA+ + L + KPD IAY + G E + + ++ ++ G P
Sbjct: 441 RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSER 500
Query: 298 DYRE 301
Y E
Sbjct: 501 IYDE 504
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/199 (18%), Positives = 90/199 (45%), Gaps = 6/199 (3%)
Query: 73 WASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQG 132
+ ++ ++Y++++ LS S + +L+ + KI + + +I + ++
Sbjct: 208 YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 267
Query: 133 KNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTI 190
N +A +++ E+ + P + NSL+ G + +A MFD M +G +
Sbjct: 268 GNLLEARNLYKEMIR--RSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 325
Query: 191 GFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD 250
+ I FC++ ++ + + E+ + ++ + +IHG+C+ ++ A KV +
Sbjct: 326 TYNTLITGFCKSKRVEDGMKLFCEMTYQ--GLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 251 ELRIRECKPDFIAYRIVAE 269
+ PD + Y I+ +
Sbjct: 384 RMVDCGVSPDIVTYNILLD 402
Score = 37.4 bits (85), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 57/138 (41%)
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ +A+ + EM + P + + ++ + + L+ +M G S +L ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
ILI F + AL L M++ G P T SLL G CQ Q A + +
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 535 DVMLARSILSTFMISLCR 552
+ I +T + LC+
Sbjct: 179 GFVPNVVIYNTVINGLCK 196
>sp|Q9C9A2|PP112_ARATH Pentatricopeptide repeat-containing protein At1g71060,
mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2
SV=1
Length = 510
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 188/426 (44%), Gaps = 55/426 (12%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSV 106
LSP+L+ V+ L LAL F WA Q F H+ +Y+++++SL +Q I S+
Sbjct: 92 LSPALIEEVLKK-LSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSL 150
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLAS 166
+ +K K+ L + I + + ++A F++++ + N +L L+
Sbjct: 151 VDDMKAKKL-LSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSK 209
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFI--WKFCENAKLGQVLSML--DEV-RKRENS 221
+ +A K+FD+M + E + + + W GQ L++L DEV R+ ++
Sbjct: 210 SRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGW--------GQELNLLRVDEVNREMKDE 261
Query: 222 MINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
V+A +II+ CK K+ EEA + +E+ R CKP
Sbjct: 262 GFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKP--------------------- 300
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+P + I GL E+++ +A E E S F ++ NAL+G+
Sbjct: 301 ------------SPHI--FCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGA 346
Query: 341 VS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
S A + M KG P T + +L + +S E EVY+ +S
Sbjct: 347 YCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE---PT 403
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ +Y +MV C RL A + EMK KG+ P + ++SL+ A C E+ L A + ++
Sbjct: 404 VSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFN 463
Query: 460 QMFASG 465
+M G
Sbjct: 464 EMLDVG 469
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 188/434 (43%), Gaps = 23/434 (5%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
SV QV N + D+ I ++ K ++ NE + P + +L L
Sbjct: 52 SVETQVSANDASQDAER----ICKILTKFTDSKVETLLNEASVK---LSPALIEEVLKKL 104
Query: 165 ASDGYIDNALKMFD-EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
++ G + AL +F + +G + +T + I + + + S++D+++ ++ ++
Sbjct: 105 SNAGVL--ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKK--LL 160
Query: 224 NGSVIAVLIIHGFCKGKRVEEA---FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
+ A LI + + ++V+EA F ++E + DF + + +V +
Sbjct: 161 SKETFA-LISRRYARARKVKEAIGAFHKMEEFGFKMESSDF---NRMLDTLSKSRNVGDA 216
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+ V K +K P Y + G E + E+ + F D +I +
Sbjct: 217 QKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINA 276
Query: 341 -VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ AI FFN M ++ P+ +L L K ++ +E ++ ++ + +
Sbjct: 277 HCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLE 336
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+YN +V C S R+ +AY + EM+ KG+ P+ Y+ ++ R + A +++
Sbjct: 337 APTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQ 396
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
M C + TY I++ F ++ A++++ M KGV P ++SL+ LC E
Sbjct: 397 TM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHEN 453
Query: 520 NLQAAFEVFNKSVN 533
L A E FN+ ++
Sbjct: 454 KLDEACEYFNEMLD 467
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 116/266 (43%), Gaps = 16/266 (6%)
Query: 307 IVERRICEAKELGEVIVSGK------FTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEK 359
++ RR A+++ E I + F ++ N ++ ++S S + A F+ M +K
Sbjct: 167 LISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKK 226
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
P + + + L + + + EV + + + D+ +Y ++++ C + + EA
Sbjct: 227 RFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEA 286
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
EM+++ P + SL+ E L A + +++ +SG TYN L+
Sbjct: 287 IRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGA 346
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ +E A + M KGV P+A TY +L L + + A+EV+ M
Sbjct: 347 YCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQ------TMSC 400
Query: 540 RSILSTFMISL---CRRGHFLVATKL 562
+ST+ I + C + +A K+
Sbjct: 401 EPTVSTYEIMVRMFCNKERLDMAIKI 426
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 221,658,416
Number of Sequences: 539616
Number of extensions: 8828177
Number of successful extensions: 30025
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 108
Number of HSP's that attempted gapping in prelim test: 22695
Number of HSP's gapped (non-prelim): 2918
length of query: 652
length of database: 191,569,459
effective HSP length: 124
effective length of query: 528
effective length of database: 124,657,075
effective search space: 65818935600
effective search space used: 65818935600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)